Psyllid ID: psy14130
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 494 | 2.2.26 [Sep-21-2011] | |||||||
| Q6DJD8 | 475 | Coronin-2B OS=Xenopus lae | N/A | N/A | 0.706 | 0.734 | 0.514 | 1e-120 | |
| A8WGE3 | 480 | Coronin-2B OS=Xenopus tro | yes | N/A | 0.706 | 0.727 | 0.514 | 1e-120 | |
| Q8BH44 | 480 | Coronin-2B OS=Mus musculu | yes | N/A | 0.706 | 0.727 | 0.496 | 1e-118 | |
| Q9UQ03 | 480 | Coronin-2B OS=Homo sapien | yes | N/A | 0.706 | 0.727 | 0.496 | 1e-117 | |
| Q92828 | 525 | Coronin-2A OS=Homo sapien | no | N/A | 0.732 | 0.689 | 0.475 | 1e-113 | |
| Q8C0P5 | 524 | Coronin-2A OS=Mus musculu | no | N/A | 0.759 | 0.715 | 0.434 | 1e-112 | |
| Q9ULV4 | 474 | Coronin-1C OS=Homo sapien | no | N/A | 0.708 | 0.738 | 0.487 | 1e-108 | |
| Q9WUM4 | 474 | Coronin-1C OS=Mus musculu | no | N/A | 0.742 | 0.774 | 0.462 | 1e-107 | |
| Q32LP9 | 525 | Coronin-2A OS=Bos taurus | no | N/A | 0.738 | 0.695 | 0.447 | 1e-107 | |
| Q6QEF8 | 472 | Coronin-6 OS=Homo sapiens | no | N/A | 0.708 | 0.741 | 0.484 | 1e-107 |
| >sp|Q6DJD8|COR2B_XENLA Coronin-2B OS=Xenopus laevis GN=coro2b PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 434 bits (1115), Expect = e-120, Method: Compositional matrix adjust.
Identities = 200/389 (51%), Positives = 271/389 (69%), Gaps = 40/389 (10%)
Query: 91 RSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHR 150
R SKFR+VYG + R+ CYD +PIT+N HD+HFCA NPKF+A+VTE AGGG+F V+P+H+
Sbjct: 8 RCSKFRNVYGKVASRENCYDCIPITKNVHDNHFCAVNPKFLAIVTESAGGGSFFVIPLHQ 67
Query: 151 ---------------------------------------VKLWYIPDGGLSGNLNEWIMD 171
V++W IPDGGL N+ E +++
Sbjct: 68 TGRIEPNYPKVCGHQGTVLDIKWNPFIENIIASCSEDTSVRIWEIPDGGLKRNMTEAVLE 127
Query: 172 LHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDG 231
L+GH RRVG IEWHPTA N++ SAG+DY I++W++ GEA+ +IDCH DVI C+SFN DG
Sbjct: 128 LYGHSRRVGLIEWHPTAINILFSAGYDYKILIWNLDVGEAVKMIDCHTDVILCMSFNTDG 187
Query: 232 SRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVG 291
S + TTCKDK +RVL+PR+G V+ + C + ++ VF GD R++TTG S+ + RQ+
Sbjct: 188 SLMATTCKDKKLRVLEPRSGRVLQETTCK-NHKVTRVVFFGDMKRLLTTGVSKWNTRQIA 246
Query: 292 LWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLN 351
LWD+ DL+ P+ E +D SG+LFP+YD DT +L+LAGKGDGNIRYYE+T E+PY+ +L
Sbjct: 247 LWDQEDLSMPVTEEEIDGLSGLLFPFYDVDTHMLYLAGKGDGNIRYYEITAEKPYLTYLM 306
Query: 352 QSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHTTRNMCEPISMIVPRKSDQFQDDLYPD 411
+ S APQ+GLG MPK G DV+ CEIFRF+KL T +N EPISMIVPR+S+ +Q+D+YP
Sbjct: 307 EFRSPAPQKGLGVMPKHGLDVSACEIFRFYKLVTLKNQIEPISMIVPRRSENYQEDIYPM 366
Query: 412 TAAPVPALSAADWYKGVNRPPVLMSMRTG 440
T+ PALS +W +GVN+ PVLMS++ G
Sbjct: 367 TSGTEPALSPDEWLRGVNKGPVLMSLKEG 395
|
May play a role in the reorganization of neuronal actin structure. Xenopus laevis (taxid: 8355) |
| >sp|A8WGE3|COR2B_XENTR Coronin-2B OS=Xenopus tropicalis GN=coro2b PE=2 SV=1 | Back alignment and function description |
|---|
Score = 433 bits (1113), Expect = e-120, Method: Compositional matrix adjust.
Identities = 200/389 (51%), Positives = 271/389 (69%), Gaps = 40/389 (10%)
Query: 91 RSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHR 150
R SKFR+VYG + R+ CYD +PIT+N HD+HFCA NPKF+A+VTE AGGG+FLV+P+ +
Sbjct: 13 RCSKFRNVYGKVASRENCYDCIPITKNVHDNHFCAVNPKFLAIVTETAGGGSFLVIPLQQ 72
Query: 151 ---------------------------------------VKLWYIPDGGLSGNLNEWIMD 171
V++W IPDGGL N++E +++
Sbjct: 73 TGRIEPNYPKVCGHQGTVLDIKWNPFIENIIASCSEDTSVRIWEIPDGGLKRNMSEAVLE 132
Query: 172 LHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDG 231
L+GH RRVG IEWHPTA N++ SAG+DY I++W++ GEA+ +IDCH DVI C+SFN DG
Sbjct: 133 LYGHSRRVGLIEWHPTAINILFSAGYDYKILIWNLDIGEAVKMIDCHRDVILCMSFNTDG 192
Query: 232 SRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVG 291
S L TTCKDK +RVL+PR+G V+ + C + ++ VF+GD R+ TTG S+ + RQ+
Sbjct: 193 SLLATTCKDKKLRVLEPRSGRVLQETACKTH-KVTRVVFLGDMKRLFTTGVSKWNTRQMA 251
Query: 292 LWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLN 351
LWD+ DL+ P+ E +D SG+LFP+YD DT +L+LAGKGDGNIRYYE+T E+PY+ +L
Sbjct: 252 LWDQEDLSMPVTEEEIDGLSGLLFPFYDADTHMLYLAGKGDGNIRYYEITAEKPYLTYLM 311
Query: 352 QSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHTTRNMCEPISMIVPRKSDQFQDDLYPD 411
+ S APQ+GLG MPK G DV+ CEIFRF+KL T +N EPISMIVPR+S+ +Q+D+YP
Sbjct: 312 EFRSPAPQKGLGVMPKHGLDVSACEIFRFYKLITLKNQIEPISMIVPRRSENYQEDIYPM 371
Query: 412 TAAPVPALSAADWYKGVNRPPVLMSMRTG 440
T+ PAL +W +GVN+ PVLMS++ G
Sbjct: 372 TSGTEPALRPEEWLRGVNKGPVLMSLKEG 400
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May play a role in the reorganization of neuronal actin structure. Xenopus tropicalis (taxid: 8364) |
| >sp|Q8BH44|COR2B_MOUSE Coronin-2B OS=Mus musculus GN=Coro2b PE=2 SV=2 | Back alignment and function description |
|---|
Score = 424 bits (1090), Expect = e-118, Method: Compositional matrix adjust.
Identities = 193/389 (49%), Positives = 268/389 (68%), Gaps = 40/389 (10%)
Query: 91 RSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHR 150
RSSKFR+VYG + R+ C+D +PIT+N HD+HFCA N +F+A+VTE AGGG+FLV+P+ +
Sbjct: 13 RSSKFRNVYGKAANREHCFDGIPITKNVHDNHFCAVNARFLAIVTESAGGGSFLVIPLEQ 72
Query: 151 ---------------------------------------VKLWYIPDGGLSGNLNEWIMD 171
V++W IPDGGL N+ E +++
Sbjct: 73 TGRIEPNYPKVCGHQGNVLDIKWNPFIDNIIASCSEDTSVRIWEIPDGGLKRNMTEALLE 132
Query: 172 LHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDG 231
LHGH RRVG +EWHPT N++ SAG+DY +++W++ GE + +IDCH DVI C+SFN DG
Sbjct: 133 LHGHSRRVGLVEWHPTTNNILFSAGYDYKVLIWNLDIGEPVKMIDCHTDVILCMSFNTDG 192
Query: 232 SRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVG 291
S L TTCKDK +RV++PR+G V+ + C R ++ VF+G+ R++TTG SR + RQ+
Sbjct: 193 SLLTTTCKDKKLRVIEPRSGRVLQEANCK-NHRVNRVVFLGNMKRLLTTGVSRWNTRQIA 251
Query: 292 LWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLN 351
LWD+ DL+ P+ E +D SG+LFP+YD DT +L+LAGKGDGNIRYYE++ E+PY+ +L
Sbjct: 252 LWDQEDLSMPMIEEEIDGLSGLLFPFYDADTHMLYLAGKGDGNIRYYEISTEKPYLSYLM 311
Query: 352 QSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHTTRNMCEPISMIVPRKSDQFQDDLYPD 411
+ S APQ+GLG MPK G DV+ CE+FRF+KL T + + EPISMIVPR+SD +Q+D+YP
Sbjct: 312 EFRSPAPQKGLGVMPKHGLDVSACEVFRFYKLVTLKGLIEPISMIVPRRSDSYQEDIYPM 371
Query: 412 TAAPVPALSAADWYKGVNRPPVLMSMRTG 440
T PAL+ +W G+NR PVLMS++ G
Sbjct: 372 TPGTEPALTPDEWLGGINRDPVLMSLKEG 400
|
May play a role in the reorganization of neuronal actin structure. Mus musculus (taxid: 10090) |
| >sp|Q9UQ03|COR2B_HUMAN Coronin-2B OS=Homo sapiens GN=CORO2B PE=2 SV=4 | Back alignment and function description |
|---|
Score = 423 bits (1087), Expect = e-117, Method: Compositional matrix adjust.
Identities = 193/389 (49%), Positives = 268/389 (68%), Gaps = 40/389 (10%)
Query: 91 RSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHR 150
RSSKFR+VYG + R+ C+D +PIT+N HD+HFCA N +F+A+VTE AGGG+FLV+P+ +
Sbjct: 13 RSSKFRNVYGKVANREHCFDGIPITKNVHDNHFCAVNTRFLAIVTESAGGGSFLVIPLEQ 72
Query: 151 ---------------------------------------VKLWYIPDGGLSGNLNEWIMD 171
V++W IP+GGL N+ E +++
Sbjct: 73 TGRIEPNYPKVCGHQGNVLDIKWNPFIDNIIASCSEDTSVRIWEIPEGGLKRNMTEALLE 132
Query: 172 LHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDG 231
LHGH RRVG +EWHPT N++ SAG+DY +++W++ GE + +IDCH DVI C+SFN DG
Sbjct: 133 LHGHSRRVGLVEWHPTTNNILFSAGYDYKVLIWNLDVGEPVKMIDCHTDVILCMSFNTDG 192
Query: 232 SRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVG 291
S L TTCKDK +RV++PR+G V+ + C R ++ VF+G+ R++TTG SR + RQ+
Sbjct: 193 SLLTTTCKDKKLRVIEPRSGRVLQEANCK-NHRVNRVVFLGNMKRLLTTGVSRWNTRQIA 251
Query: 292 LWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLN 351
LWD+ DL+ PL E +D SG+LFP+YD DT +L+LAGKGDGNIRYYE++ E+PY+ +L
Sbjct: 252 LWDQEDLSMPLIEEEIDGLSGLLFPFYDADTHMLYLAGKGDGNIRYYEISTEKPYLSYLM 311
Query: 352 QSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHTTRNMCEPISMIVPRKSDQFQDDLYPD 411
+ S APQ+GLG MPK G DV+ CE+FRF+KL T + + EPISMIVPR+SD +Q+D+YP
Sbjct: 312 EFRSPAPQKGLGVMPKHGLDVSACEVFRFYKLVTLKGLIEPISMIVPRRSDSYQEDIYPM 371
Query: 412 TAAPVPALSAADWYKGVNRPPVLMSMRTG 440
T PAL+ +W G+NR PVLMS++ G
Sbjct: 372 TPGTEPALTPDEWLGGINRDPVLMSLKEG 400
|
May play a role in the reorganization of neuronal actin structure. Homo sapiens (taxid: 9606) |
| >sp|Q92828|COR2A_HUMAN Coronin-2A OS=Homo sapiens GN=CORO2A PE=2 SV=2 | Back alignment and function description |
|---|
Score = 409 bits (1052), Expect = e-113, Method: Compositional matrix adjust.
Identities = 194/408 (47%), Positives = 276/408 (67%), Gaps = 46/408 (11%)
Query: 91 RSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHR 150
RSSKFRHV+G + ++ CYD+VPITR+ HD+HFCA NP F+AVVTE AGGGAFLV+P+H+
Sbjct: 8 RSSKFRHVFGKPASKENCYDSVPITRSVHDNHFCAVNPHFIAVVTECAGGGAFLVIPLHQ 67
Query: 151 ---------------------------------------VKLWYIPDGGLSGNLNEWIMD 171
+K+W IP L+ NL + +
Sbjct: 68 TGKLDPHYPKVCGHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRNLTAYRKE 127
Query: 172 LHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEA-----LTVIDCHPDVINCLS 226
L GH RRVG +EWHPTA N++ SAG+DY +++W++ E+ ++ I CH DVI +S
Sbjct: 128 LVGHARRVGLVEWHPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMS 187
Query: 227 FNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHS 286
FN +GS L TTCKD+ +RV+DPR G V+ Q + G R+SK +F+G+ ++++TG SR +
Sbjct: 188 FNTNGSLLATTCKDRKIRVIDPRAGTVL-QEASYKGHRASKVLFLGNLKKLMSTGTSRWN 246
Query: 287 DRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPY 346
+RQV LWD+++L+ PL E +D SSGVLFP+YD DT +L++ GKGDGNIRYYE++ ++P+
Sbjct: 247 NRQVALWDQDNLSVPLMEEDLDGSSGVLFPFYDADTSMLYVVGKGDGNIRYYEVSADKPH 306
Query: 347 IHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHTTRNMCEPISMIVPRKSDQFQD 406
+ +L + S PQ+G+G MPKRG DV+ CEIFRF+KL TT+++ EPISMIVPR+S+ +Q+
Sbjct: 307 LSYLTEYRSYNPQKGIGVMPKRGLDVSSCEIFRFYKLITTKSLIEPISMIVPRRSESYQE 366
Query: 407 DLYPDTAAPVPALSAADWYKGVNRPPVLMSMRTGVNVCTHKP-KAFRP 453
D+YP TA P+L+A +W G+NR P+L+S+R G + P A RP
Sbjct: 367 DIYPPTAGAQPSLTAQEWLSGMNRDPILVSLRPGSELLRPHPLPAERP 414
|
Homo sapiens (taxid: 9606) |
| >sp|Q8C0P5|COR2A_MOUSE Coronin-2A OS=Mus musculus GN=Coro2a PE=2 SV=1 | Back alignment and function description |
|---|
Score = 405 bits (1041), Expect = e-112, Method: Compositional matrix adjust.
Identities = 194/446 (43%), Positives = 285/446 (63%), Gaps = 71/446 (15%)
Query: 91 RSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHR 150
RSSKFRHVYG + ++ CYD+VPITR+ HD+HFCA NP F+AVVTE AGGGAFLV+P+H+
Sbjct: 8 RSSKFRHVYGKPASKENCYDSVPITRSVHDNHFCAVNPHFIAVVTECAGGGAFLVIPLHQ 67
Query: 151 ---------------------------------------VKLWYIPDGGLSGNLNEWIMD 171
+K+W IP L+ NL + +
Sbjct: 68 TGKLDPHYPKVCGHRGNVLDIKWNPFNDFEIASCSEDATIKIWNIPKQLLTRNLTTYRKE 127
Query: 172 LHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEAL-----TVIDCHPDVINCLS 226
L GH RRVG +EWHPT N++ SAG+DY +++W++ +++ I+CH DVI +S
Sbjct: 128 LIGHARRVGLVEWHPTTANILFSAGYDYKVMVWNLDTKDSVIAGPVKTINCHQDVILSMS 187
Query: 227 FNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHS 286
FN +GS L TTCKD+ +R++DPR G+V+ Q + G R++K +F+G ++++TG SR +
Sbjct: 188 FNTNGSLLATTCKDRKIRIVDPRLGIVL-QEASYKGHRANKVLFLGSLKKLLSTGTSRWN 246
Query: 287 DRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPY 346
+RQ+ LWD+ +L+ PL E +D SSGVLFP++D DT +L++ GKGDGNIRYYE++ E+P+
Sbjct: 247 NRQMALWDQENLSVPLTEEDLDGSSGVLFPFFDSDTSMLYIVGKGDGNIRYYEVSMEKPH 306
Query: 347 IHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHTTRNMCEPISMIVPRKSDQFQD 406
+ +L + S PQ+G+G MPKRG DV+ CEIFRF+KL TT+++ EP+SMIVPR+S+ +Q+
Sbjct: 307 LTYLTEYRSYNPQKGIGIMPKRGLDVSSCEIFRFYKLITTKSLIEPVSMIVPRRSESYQE 366
Query: 407 DLYPDTAAPVPALSAADWYKGVNRPPVLMSMRTGVNVCTHKPKAFRPNEATRSDHNYKMK 466
D+YP TAA P+L+A +W G+NR P++MS+R G +
Sbjct: 367 DIYPPTAAAQPSLTAHEWLSGMNRGPIMMSLRPGSEL----------------------- 403
Query: 467 FAFLNRETIPDYRPLDVSVYSMLHEP 492
L+ +T+P RPL S+ + +P
Sbjct: 404 ---LDSQTLPPERPLSNSMVQVSPQP 426
|
Mus musculus (taxid: 10090) |
| >sp|Q9ULV4|COR1C_HUMAN Coronin-1C OS=Homo sapiens GN=CORO1C PE=1 SV=1 | Back alignment and function description |
|---|
Score = 391 bits (1005), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/394 (48%), Positives = 258/394 (65%), Gaps = 44/394 (11%)
Query: 88 RGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLP 147
R VR SKFRHV+G K D CYD++ ++R DS FCA NP+FVA++ E +GGGAFLVLP
Sbjct: 3 RVVRQSKFRHVFGQAVKNDQCYDDIRVSRVTWDSSFCAVNPRFVAIIIEASGGGAFLVLP 62
Query: 148 IHR---------------------------------------VKLWYIPDGGLSGNLNEW 168
+H+ V +W IP+ GL+ +L E
Sbjct: 63 LHKTGRIDKSYPTVCGHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEP 122
Query: 169 IMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVID-CHPDVINCLSF 227
++ L GH +RVG + WHPTA NV+ SAG D II+W+VG GEAL +D H D+I +S+
Sbjct: 123 VVILEGHSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHSDMIYNVSW 182
Query: 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGV-CHPGTRSSKAVFIGDTGRIVTTGFSRHS 286
NR+GS + T KDK VRV+DPR ++++ H G R +A+F+ D G + TTGFSR S
Sbjct: 183 NRNGSLICTASKDKKVRVIDPRKQEIVAEKEKAHEGARPMRAIFLAD-GNVFTTGFSRMS 241
Query: 287 DRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPY 346
+RQ+ LW+ ++ P+AL +D+S+GVL P+YD DT I++L GKGD +IRY+E+T+E PY
Sbjct: 242 ERQLALWNPKNMQEPIALHEMDTSNGVLLPFYDPDTSIIYLCGKGDSSIRYFEITDESPY 301
Query: 347 IHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHTTRNMCEPISMIVPRKSDQFQD 406
+H+LN S PQRG+G+MPKRG DV +CEI RFFKLH + CEPI M VPRKSD FQD
Sbjct: 302 VHYLNTFSSKEPQRGMGYMPKRGLDVNKCEIARFFKLHERK--CEPIIMTVPRKSDLFQD 359
Query: 407 DLYPDTAAPVPALSAADWYKGVNRPPVLMSMRTG 440
DLYPDTA P AL A +W++G N P+L+S++ G
Sbjct: 360 DLYPDTAGPEAALEAEEWFEGKNADPILISLKHG 393
|
May be involved in cytokinesis, motility, and signal transduction. Homo sapiens (taxid: 9606) |
| >sp|Q9WUM4|COR1C_MOUSE Coronin-1C OS=Mus musculus GN=Coro1c PE=1 SV=2 | Back alignment and function description |
|---|
Score = 389 bits (1000), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/424 (46%), Positives = 267/424 (62%), Gaps = 57/424 (13%)
Query: 88 RGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLP 147
R VR SKFRHV+G K D CYD++ ++R DS FCA NP+FVA++ E +GGGAFLVLP
Sbjct: 3 RVVRQSKFRHVFGQAVKNDQCYDDIRVSRVTWDSSFCAVNPRFVAIIIEASGGGAFLVLP 62
Query: 148 IHR---------------------------------------VKLWYIPDGGLSGNLNEW 168
+H+ V +W IP+ GL+ +L E
Sbjct: 63 LHKTGRIDKSYPTVCGHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEP 122
Query: 169 IMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVID-CHPDVINCLSF 227
++ L GH +RVG + WHPTA NV+ SAG D II+W+VG GEAL +D H D+I +S+
Sbjct: 123 VVILEGHSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHSDMIYNVSW 182
Query: 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGV-CHPGTRSSKAVFIGDTGRIVTTGFSRHS 286
+R+GS + T KDK VRV+DPR ++++ H G R +A+F+ D G + TTGFSR S
Sbjct: 183 SRNGSLICTASKDKKVRVIDPRKQEIVAEKEKAHEGARPMRAIFLAD-GNVFTTGFSRMS 241
Query: 287 DRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPY 346
+RQ+ LW+ ++ P+AL +D+S+GVL P+YD DT I++L GKGD +IRY+E+T+E PY
Sbjct: 242 ERQLALWNPKNMQEPIALHEMDTSNGVLLPFYDPDTSIIYLCGKGDSSIRYFEITDESPY 301
Query: 347 IHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHTTRNMCEPISMIVPRKSDQFQD 406
+H+LN S PQRG+G+MPKRG DV +CEI RFFKLH + CEPI M VPRKSD FQD
Sbjct: 302 VHYLNTFSSKEPQRGMGYMPKRGLDVNKCEIARFFKLHERK--CEPIIMTVPRKSDLFQD 359
Query: 407 DLYPDTAAPVPALSAADWYKGVNRPPVLMSMRTGV-------------NVCTHKPKAFRP 453
DLYPDTA P AL A +W++G N P+L+S++ G N+ KP A +
Sbjct: 360 DLYPDTAGPEAALEAEEWFEGKNADPILISLKHGYIPGKNRDLKVVKKNILDSKPAANKK 419
Query: 454 NEAT 457
+E +
Sbjct: 420 SELS 423
|
May be involved in cytokinesis, motility, and signal transduction. Mus musculus (taxid: 10090) |
| >sp|Q32LP9|COR2A_BOVIN Coronin-2A OS=Bos taurus GN=CORO2A PE=2 SV=1 | Back alignment and function description |
|---|
Score = 389 bits (1000), Expect = e-107, Method: Compositional matrix adjust.
Identities = 185/413 (44%), Positives = 274/413 (66%), Gaps = 48/413 (11%)
Query: 91 RSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHR 150
RSSKFRHV+G + ++ CYD+VPIT + D+HFCA NP F+AVVTE GGGAFLV+P+H+
Sbjct: 8 RSSKFRHVFGKPASKENCYDSVPITHSVQDNHFCAVNPHFIAVVTECTGGGAFLVIPLHQ 67
Query: 151 ---------------------------------------VKLWYIPDGGLSGNLNEWIMD 171
+K+W IP L+ NL + +
Sbjct: 68 TGKLDPHYPKVCGHRGNVLDVKWNPFNDFEIASCSEDATIKIWDIPKQLLTKNLTAFRKE 127
Query: 172 LHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTV-----IDCHPDVINCLS 226
L GH R+VG +EWHPTA N++ S+G+DY +++W++ E++ + I+CH DVI +S
Sbjct: 128 LVGHARKVGLVEWHPTAANILFSSGYDYKVMVWNLDSKESVIMSPVKTINCHQDVILSMS 187
Query: 227 FNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHS 286
FN +GS L T CKD+ +RVLDPR G V+ Q + G R++K +F+G+ ++++TG SR +
Sbjct: 188 FNTNGSLLATACKDRKIRVLDPRAGTVL-QEANYKGHRANKVLFLGNLKKLLSTGTSRWN 246
Query: 287 DRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPY 346
+RQ+ LWD++DL+ P+ +D SSGVLFP+YD DT +L++ GKGD NI YYE++ +P+
Sbjct: 247 NRQMALWDQDDLSVPVTEVDLDGSSGVLFPFYDADTNMLYVVGKGDRNIHYYEISANKPH 306
Query: 347 IHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHTTRNMCEPISMIVPRKSDQFQD 406
+++L + S PQ+G+G MPKRG DV+ CEIFRF+KL TT+++ EP+SMIVPR+S+ +Q+
Sbjct: 307 LNYLMEYHSYNPQKGIGVMPKRGLDVSSCEIFRFYKLITTKSLIEPVSMIVPRRSESYQE 366
Query: 407 DLYPDTAAPVPALSAADWYKGVNRPPVLMSMRTGVNVCTHKPKAFRPNEATRS 459
D+YP TA+ P+L+A +W G+N+ PVLMS+R G + +P P+E T S
Sbjct: 367 DIYPPTASAQPSLTAQEWLSGMNKEPVLMSLRPGAEPLSPQP---LPSERTLS 416
|
Bos taurus (taxid: 9913) |
| >sp|Q6QEF8|CORO6_HUMAN Coronin-6 OS=Homo sapiens GN=CORO6 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 388 bits (997), Expect = e-107, Method: Compositional matrix adjust.
Identities = 191/394 (48%), Positives = 258/394 (65%), Gaps = 44/394 (11%)
Query: 88 RGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLP 147
R VR SKFRHV+G +K D Y+++ +++ DS FCA NPKF+A++ E GGGAF+VLP
Sbjct: 4 RVVRQSKFRHVFGQAAKADQAYEDIRVSKVTWDSSFCAVNPKFLAIIVEAGGGGAFIVLP 63
Query: 148 IHR---------------------------------------VKLWYIPDGGLSGNLNEW 168
+ + + +W IPD N+ E
Sbjct: 64 LAKTGRVDKNYPLVTGHTAPVLDIDWCPHNDNVIASASDDTTIMVWQIPDYTPMRNITEP 123
Query: 169 IMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVID-CHPDVINCLSF 227
I+ L GH +RVG + WHPTA NV+ SAG D +II+W+VG GE L +D HPDVI+ + +
Sbjct: 124 IITLEGHSKRVGILSWHPTARNVLLSAGGDNVIIIWNVGTGEVLLSLDDMHPDVIHSVCW 183
Query: 228 NRDGSRLVTTCKDKTVRVLDPRTGLVIS-QGVCHPGTRSSKAVFIGDTGRIVTTGFSRHS 286
N +GS L TTCKDKT+R++DPR G V++ Q H G R +AVF D G++++TGFSR S
Sbjct: 184 NSNGSLLATTCKDKTLRIIDPRKGQVVAEQARPHEGARPLRAVFTAD-GKLLSTGFSRMS 242
Query: 287 DRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPY 346
+RQ+ LWD N+ P+AL+ +D+S+GVL P+YD D+ I++L GKGD +IRY+E+T+E P+
Sbjct: 243 ERQLALWDPNNFEEPVALQEMDTSNGVLLPFYDPDSSIVYLCGKGDSSIRYFEITDEPPF 302
Query: 347 IHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHTTRNMCEPISMIVPRKSDQFQD 406
+H+LN S PQRG+GFMPKRG DV++CEI RF+KLH + CEPI M VPRKSD FQD
Sbjct: 303 VHYLNTFSSKEPQRGMGFMPKRGLDVSKCEIARFYKLHERK--CEPIIMTVPRKSDLFQD 360
Query: 407 DLYPDTAAPVPALSAADWYKGVNRPPVLMSMRTG 440
DLYPDT P PAL A +W G + PVL+S+R G
Sbjct: 361 DLYPDTPGPEPALEADEWLSGQDAEPVLISLRDG 394
|
Homo sapiens (taxid: 9606) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 494 | ||||||
| 328705598 | 578 | PREDICTED: coronin-2B-like [Acyrthosipho | 0.801 | 0.685 | 0.642 | 1e-174 | |
| 357620258 | 508 | hypothetical protein KGM_16781 [Danaus p | 0.799 | 0.777 | 0.704 | 1e-171 | |
| 340713007 | 540 | PREDICTED: coronin-2B-like isoform 1 [Bo | 0.801 | 0.733 | 0.612 | 1e-163 | |
| 340713009 | 582 | PREDICTED: coronin-2B-like isoform 2 [Bo | 0.801 | 0.680 | 0.612 | 1e-163 | |
| 156550141 | 573 | PREDICTED: coronin-2B-like [Nasonia vitr | 0.813 | 0.701 | 0.6 | 1e-163 | |
| 383856889 | 582 | PREDICTED: coronin-2B-like isoform 1 [Me | 0.801 | 0.680 | 0.612 | 1e-163 | |
| 380011022 | 581 | PREDICTED: LOW QUALITY PROTEIN: coronin- | 0.801 | 0.681 | 0.610 | 1e-163 | |
| 66507360 | 582 | PREDICTED: coronin-2B-like [Apis mellife | 0.801 | 0.680 | 0.610 | 1e-163 | |
| 383856891 | 587 | PREDICTED: coronin-2B-like isoform 2 [Me | 0.801 | 0.674 | 0.603 | 1e-161 | |
| 270015307 | 536 | hypothetical protein TcasGA2_TC004245 [T | 0.803 | 0.740 | 0.604 | 1e-161 |
| >gi|328705598|ref|XP_001942588.2| PREDICTED: coronin-2B-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 617 bits (1592), Expect = e-174, Method: Compositional matrix adjust.
Identities = 280/436 (64%), Positives = 349/436 (80%), Gaps = 40/436 (9%)
Query: 87 FRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 146
FRGVRSSKFRHVYG S+R+ YDN+PITRNAHDS+FCAANPKFVA+VTEVAGGGAF+VL
Sbjct: 37 FRGVRSSKFRHVYGSPSRREELYDNIPITRNAHDSNFCAANPKFVAIVTEVAGGGAFVVL 96
Query: 147 PIHR---------------------------------------VKLWYIPDGGLSGNLNE 167
PI++ +KLWYIPD GLS NLNE
Sbjct: 97 PINKTGRLDLNTSKVTGHRGPVLDVKWNPFNDNIIASCSDDCTIKLWYIPDSGLSCNLNE 156
Query: 168 WIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSF 227
W+++L GH+RRVGYIEWHPTAENV+AS+GFDY+++LWD G G+ L IDCHPD+++ L+F
Sbjct: 157 WLIELRGHRRRVGYIEWHPTAENVIASSGFDYMVMLWDAGTGQILNTIDCHPDIVHSLAF 216
Query: 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSD 287
NRDG+RL TTCKDK +R +DPR+GLV+S+G+CH G+RS K +++ D R++TTGFS +SD
Sbjct: 217 NRDGTRLATTCKDKKIRSIDPRSGLVVSEGICHEGSRSCKVIYL-DNERLLTTGFSTYSD 275
Query: 288 RQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYI 347
RQ+ +W+ DL PL +DSSSG+LFPYYD+DTR+++LAGKGDGNIRYYE+ +E PYI
Sbjct: 276 RQIAIWNHTDLLEPLHRVNIDSSSGILFPYYDYDTRMVYLAGKGDGNIRYYEIVDESPYI 335
Query: 348 HFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHTTRNMCEPISMIVPRKSDQFQDD 407
HFLNQ +SG PQ+G G M KRGC V++CEI RF+KLHTTRN+CEPISMIVPRKSDQ+Q D
Sbjct: 336 HFLNQFISGCPQKGFGMMLKRGCSVSRCEIMRFYKLHTTRNVCEPISMIVPRKSDQYQHD 395
Query: 408 LYPDTAAPVPALSAADWYKGVNRPPVLMSMRTGVNVCTHKPKAFRPNEATRSDHNYKMKF 467
LYPDTAAPVPALSA +W+ G+++PPVLMSM+TGV+V THKP+AF NEATR+D NY+MKF
Sbjct: 396 LYPDTAAPVPALSAQEWFNGISKPPVLMSMKTGVSVKTHKPQAFVSNEATRNDTNYRMKF 455
Query: 468 AFLNRETIPDYRPLDV 483
AFL++ET+PDYRPLD+
Sbjct: 456 AFLSKETVPDYRPLDM 471
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|357620258|gb|EHJ72518.1| hypothetical protein KGM_16781 [Danaus plexippus] | Back alignment and taxonomy information |
|---|
Score = 609 bits (1570), Expect = e-171, Method: Compositional matrix adjust.
Identities = 279/396 (70%), Positives = 337/396 (85%), Gaps = 1/396 (0%)
Query: 87 FRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 146
FRGVRSSKFRHVYGV KR+ CYDN+ ITRNAHDS+FCA NPKFVA+VTEVAGGGAFLVL
Sbjct: 43 FRGVRSSKFRHVYGVPFKRERCYDNIKITRNAHDSNFCAVNPKFVAIVTEVAGGGAFLVL 102
Query: 147 PIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDV 206
P+ VK+W+IPDGGLS +L +W+++LHGHKRRV YIEWHPTAEN++ SAGFDYLI +WDV
Sbjct: 103 PLDHVKIWHIPDGGLSMHLTDWLVELHGHKRRVAYIEWHPTAENILFSAGFDYLIFVWDV 162
Query: 207 GKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSS 266
GKGEA+ VIDCH DVI C+SFNRDGS L TTCKDK +RV++PR G+V+S+G CH GT++S
Sbjct: 163 GKGEAVKVIDCHSDVIYCMSFNRDGSLLATTCKDKKLRVIEPRRGIVLSEGPCHLGTKAS 222
Query: 267 KAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILF 326
K F+G +++TTGFSRHSDRQ +WD++D++ PLA ET+DSSSGV+FPYYDHDT +++
Sbjct: 223 KCTFLGAQCKVLTTGFSRHSDRQYAVWDQHDVSEPLASETIDSSSGVVFPYYDHDTNMVY 282
Query: 327 LAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHTT 386
LAGKGDGNIRYYE+ +E PY+HFLNQ LSG PQRGLGFMPKRG + + CE+FRF+KLHT+
Sbjct: 283 LAGKGDGNIRYYEVVDEAPYVHFLNQFLSGNPQRGLGFMPKRGVNTSMCEVFRFYKLHTS 342
Query: 387 RNMCEPISMIVPRKSDQFQDDLYPDTAAPVPALSAADWYKGVNRPPVLMSMRTGVNVCTH 446
R +CEPISMIVPRKSD FQ+DLYPDTAAP PALSA DW GVN PP+L+SM+TGV + TH
Sbjct: 343 RGLCEPISMIVPRKSDCFQEDLYPDTAAPQPALSARDWLSGVNAPPLLISMKTGVTISTH 402
Query: 447 KPKAFRPNEATR-SDHNYKMKFAFLNRETIPDYRPL 481
KP+ + A + D N + KFAFL+RET PDYRPL
Sbjct: 403 KPRNNKDAPALQPQDANNRKKFAFLSRETTPDYRPL 438
|
Source: Danaus plexippus Species: Danaus plexippus Genus: Danaus Family: Nymphalidae Order: Lepidoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|340713007|ref|XP_003395043.1| PREDICTED: coronin-2B-like isoform 1 [Bombus terrestris] gi|350419655|ref|XP_003492258.1| PREDICTED: coronin-2B-like isoform 2 [Bombus impatiens] | Back alignment and taxonomy information |
|---|
Score = 583 bits (1502), Expect = e-163, Method: Compositional matrix adjust.
Identities = 267/436 (61%), Positives = 335/436 (76%), Gaps = 40/436 (9%)
Query: 87 FRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 146
FRGVRSSKFRHVYGV +KR+ CYDN+ IT+NAHDS FCA NPKF+A+VTEVAGGGAFLVL
Sbjct: 9 FRGVRSSKFRHVYGVPAKREKCYDNIKITKNAHDSQFCAVNPKFLAIVTEVAGGGAFLVL 68
Query: 147 PIHR---------------------------------------VKLWYIPDGGLSGNLNE 167
P+ R +KLW+IPDGG+S NL E
Sbjct: 69 PLDRTGRLDFNASRVTGHTGPVLDIKWNPFNDNIIASCSDDCTIKLWHIPDGGISRNLTE 128
Query: 168 WIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSF 227
W+++L GHKRRV YIEWHP AENV+ SAGFD+L+I+WD+ KGEA++VID HPDVI +S
Sbjct: 129 WLVELQGHKRRVAYIEWHPVAENVLFSAGFDHLVIVWDINKGEAVSVIDRHPDVIYSISL 188
Query: 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSD 287
NRDGS L TTCKDK +RV +PR+G+V+S+GVCH GT++SK VF+G +GR++TTGFSRHSD
Sbjct: 189 NRDGSLLATTCKDKKLRVFEPRSGIVVSEGVCHAGTKASKVVFLGSSGRLLTTGFSRHSD 248
Query: 288 RQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYI 347
RQ +W ++DLN PL ET+DSSSGV+FPYYD+DT +++LAGKGDGNIRYYE+ NE P++
Sbjct: 249 RQYAIWSQHDLNVPLICETIDSSSGVVFPYYDNDTNMVYLAGKGDGNIRYYEVVNEAPWM 308
Query: 348 HFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHTTRNMCEPISMIVPRKSDQFQDD 407
H+L+Q +SG PQRGLG MPKRG + CE+FRF+KLH TR MCEPISMIVPRKSDQFQ+D
Sbjct: 309 HYLSQFISGNPQRGLGIMPKRGVNTAICEVFRFYKLHATRGMCEPISMIVPRKSDQFQED 368
Query: 408 LYPDTAAPVPALSAADWYKGVNRPPVLMSMRTGVNVCTHKPKAFRPNEA-TRSDHNYKMK 466
LYPDT PALSA DW G+N PP+L+S++TG ++ THKP+ ++P + +D N K K
Sbjct: 369 LYPDTVGTCPALSARDWISGMNNPPILISLKTGGSITTHKPRVYKPPQLPPTTDLNNKKK 428
Query: 467 FAFLNRETIPDYRPLD 482
FAFL+ ET+PDYRP++
Sbjct: 429 FAFLSTETVPDYRPIE 444
|
Source: Bombus terrestris Species: Bombus terrestris Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|340713009|ref|XP_003395044.1| PREDICTED: coronin-2B-like isoform 2 [Bombus terrestris] gi|350419652|ref|XP_003492257.1| PREDICTED: coronin-2B-like isoform 1 [Bombus impatiens] | Back alignment and taxonomy information |
|---|
Score = 582 bits (1501), Expect = e-163, Method: Compositional matrix adjust.
Identities = 267/436 (61%), Positives = 335/436 (76%), Gaps = 40/436 (9%)
Query: 87 FRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 146
FRGVRSSKFRHVYGV +KR+ CYDN+ IT+NAHDS FCA NPKF+A+VTEVAGGGAFLVL
Sbjct: 51 FRGVRSSKFRHVYGVPAKREKCYDNIKITKNAHDSQFCAVNPKFLAIVTEVAGGGAFLVL 110
Query: 147 PIHR---------------------------------------VKLWYIPDGGLSGNLNE 167
P+ R +KLW+IPDGG+S NL E
Sbjct: 111 PLDRTGRLDFNASRVTGHTGPVLDIKWNPFNDNIIASCSDDCTIKLWHIPDGGISRNLTE 170
Query: 168 WIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSF 227
W+++L GHKRRV YIEWHP AENV+ SAGFD+L+I+WD+ KGEA++VID HPDVI +S
Sbjct: 171 WLVELQGHKRRVAYIEWHPVAENVLFSAGFDHLVIVWDINKGEAVSVIDRHPDVIYSISL 230
Query: 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSD 287
NRDGS L TTCKDK +RV +PR+G+V+S+GVCH GT++SK VF+G +GR++TTGFSRHSD
Sbjct: 231 NRDGSLLATTCKDKKLRVFEPRSGIVVSEGVCHAGTKASKVVFLGSSGRLLTTGFSRHSD 290
Query: 288 RQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYI 347
RQ +W ++DLN PL ET+DSSSGV+FPYYD+DT +++LAGKGDGNIRYYE+ NE P++
Sbjct: 291 RQYAIWSQHDLNVPLICETIDSSSGVVFPYYDNDTNMVYLAGKGDGNIRYYEVVNEAPWM 350
Query: 348 HFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHTTRNMCEPISMIVPRKSDQFQDD 407
H+L+Q +SG PQRGLG MPKRG + CE+FRF+KLH TR MCEPISMIVPRKSDQFQ+D
Sbjct: 351 HYLSQFISGNPQRGLGIMPKRGVNTAICEVFRFYKLHATRGMCEPISMIVPRKSDQFQED 410
Query: 408 LYPDTAAPVPALSAADWYKGVNRPPVLMSMRTGVNVCTHKPKAFRPNEA-TRSDHNYKMK 466
LYPDT PALSA DW G+N PP+L+S++TG ++ THKP+ ++P + +D N K K
Sbjct: 411 LYPDTVGTCPALSARDWISGMNNPPILISLKTGGSITTHKPRVYKPPQLPPTTDLNNKKK 470
Query: 467 FAFLNRETIPDYRPLD 482
FAFL+ ET+PDYRP++
Sbjct: 471 FAFLSTETVPDYRPIE 486
|
Source: Bombus terrestris Species: Bombus terrestris Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|156550141|ref|XP_001606043.1| PREDICTED: coronin-2B-like [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 582 bits (1500), Expect = e-163, Method: Compositional matrix adjust.
Identities = 267/445 (60%), Positives = 337/445 (75%), Gaps = 43/445 (9%)
Query: 87 FRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 146
FRGVRSSKFRHVYG +KR+ CYDN+ IT+NAHDS FCA NPKF+A+VTEVAGGGAFLVL
Sbjct: 40 FRGVRSSKFRHVYGAPAKREKCYDNIKITKNAHDSQFCAVNPKFLAIVTEVAGGGAFLVL 99
Query: 147 PIHR---------------------------------------VKLWYIPDGGLSGNLNE 167
P+ VKLW+IPDGGLS NL +
Sbjct: 100 PLDNTGRLDFNANRVTGHTGPVLDIKWNPFNDNVIASSSDDCTVKLWHIPDGGLSRNLTD 159
Query: 168 WIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSF 227
W+++L GHKRRVGYIEWHPTAEN++ SAGFD+L+I+WD+ KGE ++VID HPDVI +S
Sbjct: 160 WLVELQGHKRRVGYIEWHPTAENILFSAGFDHLVIVWDISKGETVSVIDRHPDVIYSMSL 219
Query: 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSD 287
NRDGS L TTCKDK +RV +PR+G+++S+GVCH GT++SK VF+G +GR++TTGFSRHSD
Sbjct: 220 NRDGSLLATTCKDKKLRVFEPRSGIIVSEGVCHAGTKASKVVFLGASGRLLTTGFSRHSD 279
Query: 288 RQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYI 347
RQ +W ++DL+ PL ET+DSSSG++FP+YD+DT +++LAGKGDGNIRYYE+ NE P++
Sbjct: 280 RQYAVWSQHDLSAPLTCETIDSSSGIVFPFYDNDTNVVYLAGKGDGNIRYYEVVNEAPWV 339
Query: 348 HFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHTTRNMCEPISMIVPRKSDQFQDD 407
H+L+Q +SG PQRGLG MPKRG CE+FRF+KLH TR MCEPISMIVPRKSDQFQ+D
Sbjct: 340 HYLSQFISGNPQRGLGIMPKRGVSTAICEVFRFYKLHATRGMCEPISMIVPRKSDQFQED 399
Query: 408 LYPDTAAPVPALSAADWYKGVNRPPVLMSMRTGVNVCTHKPKAFRPNE-ATRSDHNYKMK 466
LYPDT PALSA DW G+N PPVL+S++TG ++ THKP+ ++P A+ +D N K K
Sbjct: 400 LYPDTVGTTPALSAKDWISGMNSPPVLISLKTGGSITTHKPRVYKPTHLASATDLNTKKK 459
Query: 467 FAFLNRETIPDYRPLDVSVYSMLHE 491
FAFL+ ET+PDYRP + Y+ L E
Sbjct: 460 FAFLSTETVPDYRPKE---YNELSE 481
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383856889|ref|XP_003703939.1| PREDICTED: coronin-2B-like isoform 1 [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 582 bits (1500), Expect = e-163, Method: Compositional matrix adjust.
Identities = 267/436 (61%), Positives = 335/436 (76%), Gaps = 40/436 (9%)
Query: 87 FRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 146
FRGVRSSKFRHVYGV +KR+ CYDN+ IT+NAHDS FCA NPKF+AVVTEVAGGGAFLVL
Sbjct: 51 FRGVRSSKFRHVYGVPAKREKCYDNIKITKNAHDSQFCAVNPKFLAVVTEVAGGGAFLVL 110
Query: 147 PIHR---------------------------------------VKLWYIPDGGLSGNLNE 167
P+ R +KLW+IPDGGLS NL E
Sbjct: 111 PLDRTGRLDFNASRVTGHTGPVLDIKWNPFNDNIIASCSDDCTIKLWHIPDGGLSRNLTE 170
Query: 168 WIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSF 227
W+++L GHKRRV YIEWHP AENV+ SAGFD+L+I+WD+ +GEA++VID HPDVI +S
Sbjct: 171 WLVELQGHKRRVAYIEWHPVAENVLFSAGFDHLVIVWDINRGEAVSVIDRHPDVIYSISL 230
Query: 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSD 287
NRDGS L TTCKDK +RV +PR+G+V+S+GVCH GT++SK VF+G +GR++TTGFSRHSD
Sbjct: 231 NRDGSLLATTCKDKKLRVFEPRSGIVVSEGVCHAGTKASKVVFLGSSGRLLTTGFSRHSD 290
Query: 288 RQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYI 347
RQ +W ++DL PL ET+DSSSGV+FPYYD+DT +++LAGKGDGNIRYYE+ NE P++
Sbjct: 291 RQYAIWSQHDLTVPLTCETIDSSSGVVFPYYDNDTNMVYLAGKGDGNIRYYEIVNEAPWV 350
Query: 348 HFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHTTRNMCEPISMIVPRKSDQFQDD 407
H+L+Q +SG PQRGLG MPKRG + + CE+FRF+KLH TR MCEPISMIVPRKSDQFQ+D
Sbjct: 351 HYLSQFISGNPQRGLGVMPKRGVNTSICEVFRFYKLHATRGMCEPISMIVPRKSDQFQED 410
Query: 408 LYPDTAAPVPALSAADWYKGVNRPPVLMSMRTGVNVCTHKPKAFRPNEA-TRSDHNYKMK 466
LYPDT PALSA DW G+N PP+L+S++TG ++ THKP+ ++P + +D N K K
Sbjct: 411 LYPDTVGTCPALSARDWISGMNSPPILISLKTGGSITTHKPRVYKPPQLPPTTDLNNKKK 470
Query: 467 FAFLNRETIPDYRPLD 482
FAFL+ ET+PDYRP++
Sbjct: 471 FAFLSTETVPDYRPIE 486
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|380011022|ref|XP_003689612.1| PREDICTED: LOW QUALITY PROTEIN: coronin-2B-like [Apis florea] | Back alignment and taxonomy information |
|---|
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 266/436 (61%), Positives = 334/436 (76%), Gaps = 40/436 (9%)
Query: 87 FRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 146
FRGVRSSKFRHVYGV +KR+ CYDN+ IT+NAHDS FCA NPKF+A+VTEVAGGGAFLVL
Sbjct: 51 FRGVRSSKFRHVYGVPAKREKCYDNIKITKNAHDSQFCAVNPKFLAIVTEVAGGGAFLVL 110
Query: 147 PIHR---------------------------------------VKLWYIPDGGLSGNLNE 167
P+ R +KLW+IPDGGLS NL E
Sbjct: 111 PLDRTGRLDFNASRVTGHTGPVLDIKWNPFNDNIIASCSDDCTIKLWHIPDGGLSRNLTE 170
Query: 168 WIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSF 227
W+++L GHKRRV YIEWHP AENV+ SAGFD+L+I+WD+ KGEA+ +ID HPDVI +S
Sbjct: 171 WLVELQGHKRRVAYIEWHPVAENVLFSAGFDHLVIVWDINKGEAVNIIDRHPDVIYSISL 230
Query: 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSD 287
NRDGS L TTCKDK +RV +PR+G+V+S+G+CH GT++SK VF+G +GR++TTGFSRHSD
Sbjct: 231 NRDGSLLATTCKDKKLRVFEPRSGIVVSEGICHAGTKASKVVFLGSSGRLLTTGFSRHSD 290
Query: 288 RQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYI 347
RQ +W ++DLN PL ET+DSSSGV+FPYYD+DT +++LAGKGDGNIRYYE+ NE P++
Sbjct: 291 RQYAIWSQHDLNIPLTCETIDSSSGVVFPYYDNDTNMVYLAGKGDGNIRYYEIXNEAPWM 350
Query: 348 HFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHTTRNMCEPISMIVPRKSDQFQDD 407
H+L+Q +SG PQRGLG MPKRG + CE+FRF+KLH TR MCEPISMIVPRKSDQFQ+D
Sbjct: 351 HYLSQFISGNPQRGLGVMPKRGVNTAICEVFRFYKLHATRGMCEPISMIVPRKSDQFQED 410
Query: 408 LYPDTAAPVPALSAADWYKGVNRPPVLMSMRTGVNVCTHKPKAFRPNEA-TRSDHNYKMK 466
LYPDT PALSA DW G+N PP+L+S++TG ++ THKP+ ++P + +D N K K
Sbjct: 411 LYPDTIGTCPALSARDWISGMNNPPILISLKTGGSITTHKPRIYKPPQLPPTTDLNNKKK 470
Query: 467 FAFLNRETIPDYRPLD 482
FAFL+ ET+PDYRP++
Sbjct: 471 FAFLSTETVPDYRPIE 486
|
Source: Apis florea Species: Apis florea Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|66507360|ref|XP_392833.2| PREDICTED: coronin-2B-like [Apis mellifera] | Back alignment and taxonomy information |
|---|
Score = 579 bits (1493), Expect = e-163, Method: Compositional matrix adjust.
Identities = 266/436 (61%), Positives = 333/436 (76%), Gaps = 40/436 (9%)
Query: 87 FRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 146
FRGVRSSKFRHVYGV +KR+ CYDN+ IT+NAHDS FCA NPKF+A+VTEVAGGGAFLVL
Sbjct: 51 FRGVRSSKFRHVYGVPAKREKCYDNIKITKNAHDSQFCAVNPKFLAIVTEVAGGGAFLVL 110
Query: 147 PIHR---------------------------------------VKLWYIPDGGLSGNLNE 167
P+ R +KLW+IPDGGLS NL E
Sbjct: 111 PLDRTGRLDFNASRVTGHTGPVLDIKWNPFNDNIIASCSDDCTIKLWHIPDGGLSRNLTE 170
Query: 168 WIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSF 227
W+++L GHKRRV YIEWHP AENV+ SAGFD+L+I+WD+ KGEA+ +ID HPDVI +S
Sbjct: 171 WLVELQGHKRRVAYIEWHPVAENVLFSAGFDHLVIVWDINKGEAVNIIDRHPDVIYSISL 230
Query: 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSD 287
NRDGS L TTCKDK +RV +PR+G+V+S+GVCH GT++SK VF+G +GR++TTGFSRHSD
Sbjct: 231 NRDGSLLATTCKDKKLRVFEPRSGIVVSEGVCHAGTKASKVVFLGSSGRLLTTGFSRHSD 290
Query: 288 RQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYI 347
RQ +W ++DLN L ET+DSSSGV+FPYYD+DT +++LAGKGDGNIRYYE+ NE P++
Sbjct: 291 RQYAIWSQHDLNISLTCETIDSSSGVVFPYYDNDTNMVYLAGKGDGNIRYYEIVNEAPWM 350
Query: 348 HFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHTTRNMCEPISMIVPRKSDQFQDD 407
H+L+Q +SG PQRGLG MPKRG + CE+FRF+KLH TR MCEPISMIVPRKSDQFQ+D
Sbjct: 351 HYLSQFISGNPQRGLGVMPKRGVNTAICEVFRFYKLHATRGMCEPISMIVPRKSDQFQED 410
Query: 408 LYPDTAAPVPALSAADWYKGVNRPPVLMSMRTGVNVCTHKPKAFRPNEA-TRSDHNYKMK 466
LYPDT PALSA DW G+N PP+L+S++TG ++ THKP+ ++P + +D N K K
Sbjct: 411 LYPDTVGTCPALSARDWISGMNNPPILISLKTGGSITTHKPRVYKPPQLPPTTDLNNKKK 470
Query: 467 FAFLNRETIPDYRPLD 482
FAFL+ ET+PDYRP++
Sbjct: 471 FAFLSTETVPDYRPIE 486
|
Source: Apis mellifera Species: Apis mellifera Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383856891|ref|XP_003703940.1| PREDICTED: coronin-2B-like isoform 2 [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 266/441 (60%), Positives = 334/441 (75%), Gaps = 45/441 (10%)
Query: 87 FRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 146
FRGVRSSKFRHVYGV +KR+ CYDN+ IT+NAHDS FCA NPKF+AVVTEVAGGGAFLVL
Sbjct: 51 FRGVRSSKFRHVYGVPAKREKCYDNIKITKNAHDSQFCAVNPKFLAVVTEVAGGGAFLVL 110
Query: 147 PIHR---------------------------------------VKLWYIPDGGLSGNLNE 167
P+ R +KLW+IPDGGLS NL E
Sbjct: 111 PLDRTGRLDFNASRVTGHTGPVLDIKWNPFNDNIIASCSDDCTIKLWHIPDGGLSRNLTE 170
Query: 168 WIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSF 227
W+++L GHKRRV YIEWHP AENV+ SAGFD+L+I+WD+ +GEA++VID HPDVI +S
Sbjct: 171 WLVELQGHKRRVAYIEWHPVAENVLFSAGFDHLVIVWDINRGEAVSVIDRHPDVIYSISL 230
Query: 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSD 287
NRDGS L TTCKDK +RV +PR+G+V+S+GVCH GT++SK VF+G +GR++TTGFSRHSD
Sbjct: 231 NRDGSLLATTCKDKKLRVFEPRSGIVVSEGVCHAGTKASKVVFLGSSGRLLTTGFSRHSD 290
Query: 288 RQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYI 347
RQ +W ++DL PL ET+DSSSGV+FPYYD+DT +++LAGKGDGNIRYYE+ NE P++
Sbjct: 291 RQYAIWSQHDLTVPLTCETIDSSSGVVFPYYDNDTNMVYLAGKGDGNIRYYEIVNEAPWV 350
Query: 348 HFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHTTRNMCEPISMIVPRK-----SD 402
H+L+Q +SG PQRGLG MPKRG + + CE+FRF+KLH TR MCEPISMIVPRK D
Sbjct: 351 HYLSQFISGNPQRGLGVMPKRGVNTSICEVFRFYKLHATRGMCEPISMIVPRKVDFSSCD 410
Query: 403 QFQDDLYPDTAAPVPALSAADWYKGVNRPPVLMSMRTGVNVCTHKPKAFRPNEA-TRSDH 461
QFQ+DLYPDT PALSA DW G+N PP+L+S++TG ++ THKP+ ++P + +D
Sbjct: 411 QFQEDLYPDTVGTCPALSARDWISGMNSPPILISLKTGGSITTHKPRVYKPPQLPPTTDL 470
Query: 462 NYKMKFAFLNRETIPDYRPLD 482
N K KFAFL+ ET+PDYRP++
Sbjct: 471 NNKKKFAFLSTETVPDYRPIE 491
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|270015307|gb|EFA11755.1| hypothetical protein TcasGA2_TC004245 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 266/440 (60%), Positives = 333/440 (75%), Gaps = 43/440 (9%)
Query: 87 FRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 146
FRGVRSSKFRHVYG +KR+ CYDN+ IT+NAHDS FCA NPKFVA+VTEVAGGGAF+V+
Sbjct: 8 FRGVRSSKFRHVYGEPAKREKCYDNINITKNAHDSQFCAVNPKFVALVTEVAGGGAFIVI 67
Query: 147 PIHR---------------------------------------VKLWYIPDGGLSGNLNE 167
PI +KLW+IPDGGLS +L E
Sbjct: 68 PIESTGRLDFNASRVTGHTGPVLDIKWNPFNDNVIASCSDDCTIKLWHIPDGGLSMHLTE 127
Query: 168 WIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSF 227
W+++L GHKRRV YIEWHP AEN++ SAGFD+L+I+WD+ KGE + VIDCHPDVI +S
Sbjct: 128 WLVELQGHKRRVAYIEWHPCAENILFSAGFDHLVIIWDIEKGETVNVIDCHPDVIYSMSL 187
Query: 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSD 287
NRDGS L TTCKDK +RV++PR+G+V S+GVCH G+++SK F+G +GR++TTGFSRHSD
Sbjct: 188 NRDGSLLTTTCKDKKLRVIEPRSGIVKSEGVCHAGSKASKVTFLGSSGRLLTTGFSRHSD 247
Query: 288 RQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYI 347
RQ +WD+NDL+ PL ++T+DSSSGV+FP++D D+ I+FLAGKGDGNIRYYE+T+E PYI
Sbjct: 248 RQYSIWDQNDLSKPLTIDTIDSSSGVVFPFFDCDSNIVFLAGKGDGNIRYYEVTDEPPYI 307
Query: 348 HFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHTTRNMCEPISMIVPRKSDQFQDD 407
HFL+Q LSG+PQRGLG MPKRG ++ CEIFRF+KLH + +CEPISMIVPRKSDQF +D
Sbjct: 308 HFLSQFLSGSPQRGLGIMPKRGLNIHICEIFRFYKLHAIKGICEPISMIVPRKSDQFHED 367
Query: 408 LYPDTAAPVPALSAADWYKGVNRPPVLMSMRTGVNVCTHKPKAFRPNEATRS----DHNY 463
LYPDTAAP PALSA +W KG+N P+LMSM+ G N+ T+KP+ + N+ + N
Sbjct: 368 LYPDTAAPKPALSAQEWIKGLNANPILMSMKMGGNITTYKPRVYNNNKPGTTPIVASQNN 427
Query: 464 KMKFAFLNRETIPDYRPLDV 483
KMK AFL+ ETIPDYRP D+
Sbjct: 428 KMKLAFLSTETIPDYRPKDL 447
|
Source: Tribolium castaneum Species: Tribolium castaneum Genus: Tribolium Family: Tenebrionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 494 | ||||||
| MGI|MGI:2444283 | 480 | Coro2b "coronin, actin binding | 0.585 | 0.602 | 0.541 | 2.8e-105 | |
| UNIPROTKB|G5E5F8 | 443 | CORO2B "Coronin" [Bos taurus ( | 0.585 | 0.652 | 0.541 | 4.5e-105 | |
| UNIPROTKB|Q9UQ03 | 480 | CORO2B "Coronin-2B" [Homo sapi | 0.585 | 0.602 | 0.541 | 4.5e-105 | |
| UNIPROTKB|F1LMV9 | 480 | Coro2b "Coronin" [Rattus norve | 0.585 | 0.602 | 0.541 | 7.3e-105 | |
| UNIPROTKB|E2REL6 | 475 | CORO2B "Coronin" [Canis lupus | 0.585 | 0.608 | 0.537 | 1.9e-104 | |
| UNIPROTKB|F1SJH0 | 497 | CORO2B "Coronin" [Sus scrofa ( | 0.597 | 0.593 | 0.518 | 8.4e-102 | |
| MGI|MGI:1345966 | 524 | Coro2a "coronin, actin binding | 0.585 | 0.551 | 0.488 | 5.6e-101 | |
| UNIPROTKB|Q92828 | 525 | CORO2A "Coronin-2A" [Homo sapi | 0.611 | 0.575 | 0.495 | 1.4e-99 | |
| RGD|1309719 | 524 | Coro2a "coronin, actin binding | 0.607 | 0.572 | 0.477 | 4.7e-99 | |
| UNIPROTKB|F1LSP7 | 543 | Coro2a "Coronin" [Rattus norve | 0.607 | 0.552 | 0.477 | 4.7e-99 |
| MGI|MGI:2444283 Coro2b "coronin, actin binding protein, 2B" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 912 (326.1 bits), Expect = 2.8e-105, Sum P(2) = 2.8e-105
Identities = 157/290 (54%), Positives = 218/290 (75%)
Query: 151 VKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE 210
V++W IPDGGL N+ E +++LHGH RRVG +EWHPT N++ SAG+DY +++W++ GE
Sbjct: 112 VRIWEIPDGGLKRNMTEALLELHGHSRRVGLVEWHPTTNNILFSAGYDYKVLIWNLDIGE 171
Query: 211 ALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVF 270
+ +IDCH DVI C+SFN DGS L TTCKDK +RV++PR+G V+ + C R ++ VF
Sbjct: 172 PVKMIDCHTDVILCMSFNTDGSLLTTTCKDKKLRVIEPRSGRVLQEANCK-NHRVNRVVF 230
Query: 271 IGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGK 330
+G+ R++TTG SR + RQ+ LWD+ DL+ P+ E +D SG+LFP+YD DT +L+LAGK
Sbjct: 231 LGNMKRLLTTGVSRWNTRQIALWDQEDLSMPMIEEEIDGLSGLLFPFYDADTHMLYLAGK 290
Query: 331 GDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHTTRNMC 390
GDGNIRYYE++ E+PY+ +L + S APQ+GLG MPK G DV+ CE+FRF+KL T + +
Sbjct: 291 GDGNIRYYEISTEKPYLSYLMEFRSPAPQKGLGVMPKHGLDVSACEVFRFYKLVTLKGLI 350
Query: 391 EPISMIVPRKSDQFQDDLYPDTAAPVPALSAADWYKGVNRPPVLMSMRTG 440
EPISMIVPR+SD +Q+D+YP T PAL+ +W G+NR PVLMS++ G
Sbjct: 351 EPISMIVPRRSDSYQEDIYPMTPGTEPALTPDEWLGGINRDPVLMSLKEG 400
|
|
| UNIPROTKB|G5E5F8 CORO2B "Coronin" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 911 (325.7 bits), Expect = 4.5e-105, Sum P(2) = 4.5e-105
Identities = 157/290 (54%), Positives = 218/290 (75%)
Query: 151 VKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE 210
V++W IP+GGL N+ E +++LHGH RRVG +EWHPT N++ SAG+DY +++W++ GE
Sbjct: 112 VRIWEIPEGGLKRNMTEALLELHGHSRRVGLVEWHPTTNNILFSAGYDYKVLIWNLDVGE 171
Query: 211 ALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVF 270
+ +IDCH DVI C+SFN DGS L TTCKDK +RV++PR+G V+ + C R ++ VF
Sbjct: 172 PVKMIDCHSDVILCMSFNTDGSLLTTTCKDKKLRVIEPRSGRVLQEANCK-NHRVNRVVF 230
Query: 271 IGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGK 330
+G+ R++TTG SR + RQ+ LWD+ DL+ PL E +D SG+LFP+YD DT +L+LAGK
Sbjct: 231 LGNMKRLLTTGVSRWNTRQIALWDQEDLSMPLIEEEIDGLSGLLFPFYDADTHMLYLAGK 290
Query: 331 GDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHTTRNMC 390
GDGNIRYYE++ E+PY+ +L + S APQ+GLG MPK G DV+ CE+FRF+KL T + +
Sbjct: 291 GDGNIRYYEISTEKPYLSYLMEFRSPAPQKGLGVMPKHGLDVSACEVFRFYKLVTLKGLI 350
Query: 391 EPISMIVPRKSDQFQDDLYPDTAAPVPALSAADWYKGVNRPPVLMSMRTG 440
EPISMIVPR+SD +Q+D+YP T PAL+ +W G+NR PVLMS++ G
Sbjct: 351 EPISMIVPRRSDSYQEDIYPMTPGTEPALTPDEWLGGINRDPVLMSLKEG 400
|
|
| UNIPROTKB|Q9UQ03 CORO2B "Coronin-2B" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 911 (325.7 bits), Expect = 4.5e-105, Sum P(2) = 4.5e-105
Identities = 157/290 (54%), Positives = 218/290 (75%)
Query: 151 VKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE 210
V++W IP+GGL N+ E +++LHGH RRVG +EWHPT N++ SAG+DY +++W++ GE
Sbjct: 112 VRIWEIPEGGLKRNMTEALLELHGHSRRVGLVEWHPTTNNILFSAGYDYKVLIWNLDVGE 171
Query: 211 ALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVF 270
+ +IDCH DVI C+SFN DGS L TTCKDK +RV++PR+G V+ + C R ++ VF
Sbjct: 172 PVKMIDCHTDVILCMSFNTDGSLLTTTCKDKKLRVIEPRSGRVLQEANCK-NHRVNRVVF 230
Query: 271 IGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGK 330
+G+ R++TTG SR + RQ+ LWD+ DL+ PL E +D SG+LFP+YD DT +L+LAGK
Sbjct: 231 LGNMKRLLTTGVSRWNTRQIALWDQEDLSMPLIEEEIDGLSGLLFPFYDADTHMLYLAGK 290
Query: 331 GDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHTTRNMC 390
GDGNIRYYE++ E+PY+ +L + S APQ+GLG MPK G DV+ CE+FRF+KL T + +
Sbjct: 291 GDGNIRYYEISTEKPYLSYLMEFRSPAPQKGLGVMPKHGLDVSACEVFRFYKLVTLKGLI 350
Query: 391 EPISMIVPRKSDQFQDDLYPDTAAPVPALSAADWYKGVNRPPVLMSMRTG 440
EPISMIVPR+SD +Q+D+YP T PAL+ +W G+NR PVLMS++ G
Sbjct: 351 EPISMIVPRRSDSYQEDIYPMTPGTEPALTPDEWLGGINRDPVLMSLKEG 400
|
|
| UNIPROTKB|F1LMV9 Coro2b "Coronin" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 909 (325.0 bits), Expect = 7.3e-105, Sum P(2) = 7.3e-105
Identities = 157/290 (54%), Positives = 218/290 (75%)
Query: 151 VKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE 210
V++W IP+GGL N+ E +++LHGH RRVG +EWHPT N++ SAG+DY +++W++ GE
Sbjct: 112 VRIWEIPEGGLKRNMTEALLELHGHSRRVGLVEWHPTTNNILFSAGYDYKVLIWNLDIGE 171
Query: 211 ALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVF 270
+ +IDCH DVI C+SFN DGS L TTCKDK +RV++PR+G V+ + C R ++ VF
Sbjct: 172 PVKMIDCHTDVILCMSFNTDGSLLTTTCKDKKLRVIEPRSGRVLQEANCK-NHRVNRVVF 230
Query: 271 IGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGK 330
+G+ R++TTG SR + RQ+ LWD+ DL+ P+ E +D SG+LFP+YD DT +L+LAGK
Sbjct: 231 LGNMKRLLTTGVSRWNTRQIALWDQEDLSMPMIEEEIDGLSGLLFPFYDADTHMLYLAGK 290
Query: 331 GDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHTTRNMC 390
GDGNIRYYE++ E+PY+ +L + S APQ+GLG MPK G DV+ CE+FRF+KL T + +
Sbjct: 291 GDGNIRYYEISTEKPYLSYLMEFRSPAPQKGLGVMPKHGLDVSACEVFRFYKLVTLKGLI 350
Query: 391 EPISMIVPRKSDQFQDDLYPDTAAPVPALSAADWYKGVNRPPVLMSMRTG 440
EPISMIVPR+SD +Q+D+YP T PAL+ +W GVNR PVLMS++ G
Sbjct: 351 EPISMIVPRRSDSYQEDIYPMTPGTEPALTPDEWLGGVNRDPVLMSLKEG 400
|
|
| UNIPROTKB|E2REL6 CORO2B "Coronin" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 905 (323.6 bits), Expect = 1.9e-104, Sum P(2) = 1.9e-104
Identities = 156/290 (53%), Positives = 218/290 (75%)
Query: 151 VKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE 210
V++W IP+GGL N+ E +++LHGH RRVG +EWHPT N++ SAG+DY +++W++ GE
Sbjct: 107 VRIWEIPEGGLKRNMTEALLELHGHSRRVGLVEWHPTTNNILFSAGYDYKVLIWNLDVGE 166
Query: 211 ALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVF 270
+ +IDCH DVI C+SFN DGS L TTCKDK +RV++PR+G V+ + C R ++ VF
Sbjct: 167 PVKMIDCHSDVILCMSFNTDGSLLTTTCKDKKLRVIEPRSGRVLQEANCK-NHRVNRVVF 225
Query: 271 IGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGK 330
+G+ R++TTG SR + RQ+ LWD+ DL+ PL E +D SG+LFP+YD DT +L+LAGK
Sbjct: 226 LGNMKRLLTTGVSRWNTRQIALWDQEDLSMPLIEEEIDGLSGLLFPFYDADTHMLYLAGK 285
Query: 331 GDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHTTRNMC 390
GDGNIRYYE++ E+P++ +L + S APQ+GLG MPK G DV+ CE+FRF+KL T + +
Sbjct: 286 GDGNIRYYEISTEKPFLSYLMEFRSPAPQKGLGVMPKHGLDVSACEVFRFYKLVTLKGLI 345
Query: 391 EPISMIVPRKSDQFQDDLYPDTAAPVPALSAADWYKGVNRPPVLMSMRTG 440
EPISMIVPR+SD +Q+D+YP T PAL+ +W G+NR PVLMS++ G
Sbjct: 346 EPISMIVPRRSDSYQEDIYPMTPGTEPALTPDEWLGGMNRDPVLMSLKEG 395
|
|
| UNIPROTKB|F1SJH0 CORO2B "Coronin" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 880 (314.8 bits), Expect = 8.4e-102, Sum P(2) = 8.4e-102
Identities = 154/297 (51%), Positives = 217/297 (73%)
Query: 151 VKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE 210
V++W IP+GGL N+ E +++LHGH RRVG +EWHPT N++ SAG+DY +++W++ GE
Sbjct: 107 VRIWEIPEGGLKRNMTEALLELHGHSRRVGLVEWHPTTNNILFSAGYDYKVLIWNLDVGE 166
Query: 211 ALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVF 270
+ +IDCH DVI C+SFN DGS L TTCKDK +RV++PR+G V+ + C R ++ VF
Sbjct: 167 PVKMIDCHSDVILCMSFNTDGSLLTTTCKDKKLRVIEPRSGRVLQEANCK-NHRVNRVVF 225
Query: 271 IGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGK 330
+G+ R++TTG SR + RQ+ LWD+ DL+ PL E +D SG+LFP+YD DT +L+LAGK
Sbjct: 226 LGNMKRLLTTGVSRWNTRQIALWDQEDLSMPLIEEEIDGLSGLLFPFYDADTHMLYLAGK 285
Query: 331 GDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHTTRNMC 390
GDGNIRYYE++ E+PY+ +L + S APQ+GLG MPK G DV+ CE+FRF+KL T + +
Sbjct: 286 GDGNIRYYEISTEKPYLSYLMEFRSPAPQKGLGVMPKHGLDVSACEVFRFYKLVTLKGLI 345
Query: 391 EPISMIVPRKSDQFQDDLYPDTAAPVPALSAADWYKGVNRPPVLMSMR-TGVNVCTH 446
EPISMIVPR+SD +Q+D+YP T PAL+ +W G+NR + S+ ++V H
Sbjct: 346 EPISMIVPRRSDSYQEDIYPMTPGTEPALTPDEWLGGINRACLSSSLNLASLSVRIH 402
|
|
| MGI|MGI:1345966 Coro2a "coronin, actin binding protein 2A" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 824 (295.1 bits), Expect = 5.6e-101, Sum P(3) = 5.6e-101
Identities = 144/295 (48%), Positives = 218/295 (73%)
Query: 151 VKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE 210
+K+W IP L+ NL + +L GH RRVG +EWHPT N++ SAG+DY +++W++ +
Sbjct: 107 IKIWNIPKQLLTRNLTTYRKELIGHARRVGLVEWHPTTANILFSAGYDYKVMVWNLDTKD 166
Query: 211 ALTV-----IDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRS 265
++ I+CH DVI +SFN +GS L TTCKD+ +R++DPR G+V+ Q + G R+
Sbjct: 167 SVIAGPVKTINCHQDVILSMSFNTNGSLLATTCKDRKIRIVDPRLGIVL-QEASYKGHRA 225
Query: 266 SKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRIL 325
+K +F+G ++++TG SR ++RQ+ LWD+ +L+ PL E +D SSGVLFP++D DT +L
Sbjct: 226 NKVLFLGSLKKLLSTGTSRWNNRQMALWDQENLSVPLTEEDLDGSSGVLFPFFDSDTSML 285
Query: 326 FLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHT 385
++ GKGDGNIRYYE++ E+P++ +L + S PQ+G+G MPKRG DV+ CEIFRF+KL T
Sbjct: 286 YIVGKGDGNIRYYEVSMEKPHLTYLTEYRSYNPQKGIGIMPKRGLDVSSCEIFRFYKLIT 345
Query: 386 TRNMCEPISMIVPRKSDQFQDDLYPDTAAPVPALSAADWYKGVNRPPVLMSMRTG 440
T+++ EP+SMIVPR+S+ +Q+D+YP TAA P+L+A +W G+NR P++MS+R G
Sbjct: 346 TKSLIEPVSMIVPRRSESYQEDIYPPTAAAQPSLTAHEWLSGMNRGPIMMSLRPG 400
|
|
| UNIPROTKB|Q92828 CORO2A "Coronin-2A" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 841 (301.1 bits), Expect = 1.4e-99, Sum P(2) = 1.4e-99
Identities = 153/309 (49%), Positives = 224/309 (72%)
Query: 151 VKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE 210
+K+W IP L+ NL + +L GH RRVG +EWHPTA N++ SAG+DY +++W++ E
Sbjct: 107 IKIWSIPKQLLTRNLTAYRKELVGHARRVGLVEWHPTAANILFSAGYDYKVMIWNLDTKE 166
Query: 211 A-----LTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRS 265
+ ++ I CH DVI +SFN +GS L TTCKD+ +RV+DPR G V+ Q + G R+
Sbjct: 167 SVITSPMSTISCHQDVILSMSFNTNGSLLATTCKDRKIRVIDPRAGTVL-QEASYKGHRA 225
Query: 266 SKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRIL 325
SK +F+G+ ++++TG SR ++RQV LWD+++L+ PL E +D SSGVLFP+YD DT +L
Sbjct: 226 SKVLFLGNLKKLMSTGTSRWNNRQVALWDQDNLSVPLMEEDLDGSSGVLFPFYDADTSML 285
Query: 326 FLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHT 385
++ GKGDGNIRYYE++ ++P++ +L + S PQ+G+G MPKRG DV+ CEIFRF+KL T
Sbjct: 286 YVVGKGDGNIRYYEVSADKPHLSYLTEYRSYNPQKGIGVMPKRGLDVSSCEIFRFYKLIT 345
Query: 386 TRNMCEPISMIVPRKSDQFQDDLYPDTAAPVPALSAADWYKGVNRPPVLMSMRTGVNVCT 445
T+++ EPISMIVPR+S+ +Q+D+YP TA P+L+A +W G+NR P+L+S+R G +
Sbjct: 346 TKSLIEPISMIVPRRSESYQEDIYPPTAGAQPSLTAQEWLSGMNRDPILVSLRPGSELLR 405
Query: 446 HKP-KAFRP 453
P A RP
Sbjct: 406 PHPLPAERP 414
|
|
| RGD|1309719 Coro2a "coronin, actin binding protein 2A" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 832 (297.9 bits), Expect = 4.7e-99, Sum P(2) = 4.7e-99
Identities = 147/308 (47%), Positives = 225/308 (73%)
Query: 151 VKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE 210
+K+W IP L+ NL + +L GH RRVG +EWHPT N++ SAG+DY +++W++ +
Sbjct: 107 IKIWNIPKQLLTRNLTTYRKELMGHARRVGLVEWHPTTANILFSAGYDYKVMVWNLDTKD 166
Query: 211 ALT-----VIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRS 265
++ I+CH DVI +SFN +GS L TTCKD+ +R++DPR G+V+ Q + G R+
Sbjct: 167 SVISGPVRTINCHQDVILSMSFNTNGSLLATTCKDRKIRIVDPRLGIVL-QEASYKGHRA 225
Query: 266 SKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRIL 325
+K +F+G+ ++++TG SR ++RQ+ LWD+++L+ PL E +D SSGVLFP++D DT +L
Sbjct: 226 NKVLFLGNLKKLLSTGTSRWNNRQMALWDQDNLSVPLTEEDLDGSSGVLFPFFDSDTSML 285
Query: 326 FLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHT 385
++ GKGDGNIRYYE++ E+P++ +L + S PQ+G+G MPKRG DV+ CEIFRF+KL T
Sbjct: 286 YIVGKGDGNIRYYEVSTEKPHLTYLTEYRSYNPQKGIGIMPKRGLDVSSCEIFRFYKLIT 345
Query: 386 TRNMCEPISMIVPRKSDQFQDDLYPDTAAPVPALSAADWYKGVNRPPVLMSMRTGVNVCT 445
T+++ EP+SMIVPR+S+ +Q+D+YP TAA P+L+A +W G+NR P++MS+R G +
Sbjct: 346 TKSLIEPVSMIVPRRSESYQEDIYPPTAAAQPSLTAHEWLSGMNRGPIMMSLRPGSELLD 405
Query: 446 HKPKAFRP 453
P+A P
Sbjct: 406 --PQALPP 411
|
|
| UNIPROTKB|F1LSP7 Coro2a "Coronin" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 832 (297.9 bits), Expect = 4.7e-99, Sum P(2) = 4.7e-99
Identities = 147/308 (47%), Positives = 225/308 (73%)
Query: 151 VKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE 210
+K+W IP L+ NL + +L GH RRVG +EWHPT N++ SAG+DY +++W++ +
Sbjct: 126 IKIWNIPKQLLTRNLTTYRKELMGHARRVGLVEWHPTTANILFSAGYDYKVMVWNLDTKD 185
Query: 211 ALT-----VIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRS 265
++ I+CH DVI +SFN +GS L TTCKD+ +R++DPR G+V+ Q + G R+
Sbjct: 186 SVISGPVRTINCHQDVILSMSFNTNGSLLATTCKDRKIRIVDPRLGIVL-QEASYKGHRA 244
Query: 266 SKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRIL 325
+K +F+G+ ++++TG SR ++RQ+ LWD+++L+ PL E +D SSGVLFP++D DT +L
Sbjct: 245 NKVLFLGNLKKLLSTGTSRWNNRQMALWDQDNLSVPLTEEDLDGSSGVLFPFFDSDTSML 304
Query: 326 FLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHT 385
++ GKGDGNIRYYE++ E+P++ +L + S PQ+G+G MPKRG DV+ CEIFRF+KL T
Sbjct: 305 YIVGKGDGNIRYYEVSTEKPHLTYLTEYRSYNPQKGIGIMPKRGLDVSSCEIFRFYKLIT 364
Query: 386 TRNMCEPISMIVPRKSDQFQDDLYPDTAAPVPALSAADWYKGVNRPPVLMSMRTGVNVCT 445
T+++ EP+SMIVPR+S+ +Q+D+YP TAA P+L+A +W G+NR P++MS+R G +
Sbjct: 365 TKSLIEPVSMIVPRRSESYQEDIYPPTAAAQPSLTAHEWLSGMNRGPIMMSLRPGSELLD 424
Query: 446 HKPKAFRP 453
P+A P
Sbjct: 425 --PQALPP 430
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P27133 | COROA_DICDI | No assigned EC number | 0.4022 | 0.7712 | 0.8561 | yes | N/A |
| Q9UQ03 | COR2B_HUMAN | No assigned EC number | 0.4961 | 0.7064 | 0.7270 | yes | N/A |
| Q8BH44 | COR2B_MOUSE | No assigned EC number | 0.4961 | 0.7064 | 0.7270 | yes | N/A |
| A8WGE3 | COR2B_XENTR | No assigned EC number | 0.5141 | 0.7064 | 0.7270 | yes | N/A |
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 494 | |||
| PTZ00421 | 493 | PTZ00421, PTZ00421, coronin; Provisional | 5e-86 | |
| pfam08954 | 136 | pfam08954, DUF1900, Domain of unknown function (DU | 7e-74 | |
| PTZ00420 | 568 | PTZ00420, PTZ00420, coronin; Provisional | 2e-52 | |
| pfam08953 | 65 | pfam08953, DUF1899, Domain of unknown function (DU | 5e-33 | |
| pfam08953 | 65 | pfam08953, DUF1899, Domain of unknown function (DU | 5e-28 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 5e-19 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 7e-15 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 1e-13 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 1e-11 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 3e-11 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 2e-10 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 5e-10 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 1e-09 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 3e-09 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 1e-05 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 2e-05 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 4e-05 |
| >gnl|CDD|173611 PTZ00421, PTZ00421, coronin; Provisional | Back alignment and domain information |
|---|
Score = 272 bits (698), Expect = 5e-86
Identities = 140/407 (34%), Positives = 214/407 (52%), Gaps = 46/407 (11%)
Query: 93 SKFRHVYGVHSKRDGCYDNV-PITRNAHDSHFCAANPKFVAVVTEVAGGGAFL------- 144
S+FRH GV ++ D + NV P T S+ A N +F+AV + G A L
Sbjct: 4 SRFRHTQGVPARPDRHFLNVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGK 63
Query: 145 -------VL----PIHRVKL-------------------WYIPDGGLSGNLNEWIMDLHG 174
+L PI V W IP+ GL+ N+++ I+ L G
Sbjct: 64 LASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQG 123
Query: 175 HKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRL 234
H ++VG + +HP+A NV+ASAG D ++ +WDV +G+A+ VI CH D I L +N DGS L
Sbjct: 124 HTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLL 183
Query: 235 VTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWD 294
TT KDK + ++DPR G ++S H +S + ++ I+T G S+ RQ+ LWD
Sbjct: 184 CTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWD 243
Query: 295 ENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSL 354
+ +P + +D SS + P++D DT +L++ KG+GNIR +EL NER + F +
Sbjct: 244 TRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNER--LTFCSSYS 301
Query: 355 SGAPQRGLGFMPKRGCDVTQCEIFRFFKLHTTRNMCEPISMIVPRKS--DQFQDDLYPDT 412
S P +GL MPK D +CEI RF+ L T ++ I M++PRK + Q D+YP T
Sbjct: 302 SVEPHKGLCMMPKWSLDTRKCEIARFYAL-TYHSLY-TIQMLLPRKQADSELQVDVYPPT 359
Query: 413 AAPVPALSAADWYKGVNRPPVLMSMRTGVNVCTHKPKAFRPNEATRS 459
A PA++A +++ G N P++ M + P+ + + S
Sbjct: 360 FADHPAITADEYFSGGNAEPLVYDMSAVFD--GTSPELMGASALSPS 404
|
Length = 493 |
| >gnl|CDD|220080 pfam08954, DUF1900, Domain of unknown function (DUF1900) | Back alignment and domain information |
|---|
Score = 228 bits (585), Expect = 7e-74
Identities = 81/138 (58%), Positives = 103/138 (74%), Gaps = 3/138 (2%)
Query: 301 PLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQR 360
PLA E +D+SSGVL P+YD DT +L+LAGKGDGNIRYYE+T+E PY+H+L++ S PQ+
Sbjct: 1 PLATEELDTSSGVLIPFYDEDTGLLYLAGKGDGNIRYYEVTDEEPYLHYLSEYTSTEPQK 60
Query: 361 GLGFMPKRGCDVTQCEIFRFFKLHTTRNMCEPISMIVPRK-SDQFQDDLYPDTAAPVPAL 419
G F+PKR DV +CEI RF+KL EPIS IVPRK S+ FQ+DLYPDTA PAL
Sbjct: 61 GFCFLPKRALDVKKCEIARFYKLTNDS--IEPISFIVPRKNSELFQEDLYPDTAGTEPAL 118
Query: 420 SAADWYKGVNRPPVLMSM 437
+A +W G N+ P L+S+
Sbjct: 119 TAEEWLSGKNKEPQLISL 136
|
This domain is predominantly found in the structural protein coronin, and is duplicated in some sequences. It has no known function. Length = 136 |
| >gnl|CDD|240412 PTZ00420, PTZ00420, coronin; Provisional | Back alignment and domain information |
|---|
Score = 186 bits (473), Expect = 2e-52
Identities = 127/395 (32%), Positives = 200/395 (50%), Gaps = 44/395 (11%)
Query: 45 YDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRFRGVRSSKFRHVYGVHSK 104
+D++ I DS A + FVAV EV GGG L+ I +R + G S
Sbjct: 19 FDDLRICSRVIDSCGIACSSGFVAVPWEVEGGG--LIGAIRLENQMRKPPVIKLKGHTS- 75
Query: 105 RDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLSGN 164
I D F NP F ++ A G L +++W IP +
Sbjct: 76 --------SIL----DLQF---NPCFSEIL---ASGSEDLT-----IRVWEIPHN--DES 110
Query: 165 LNEWIMD----LHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDV-GKGEALTVIDCHP 219
+ E I D L GHK+++ I+W+P ++ S+GFD + +WD+ + A + P
Sbjct: 111 VKE-IKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQIN--MP 167
Query: 220 DVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFI----GDTG 275
++ L +N G+ L TC K + ++DPR + S H G +++K ++I GD
Sbjct: 168 KKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGGDDN 227
Query: 276 RIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNI 335
I++TGFS+++ R++ LWD + + L ++D++S L P+YD T +++L GKGDGN
Sbjct: 228 YILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNC 287
Query: 336 RYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHTTRNMCEPISM 395
RYY+ + I +N+ S +P R GF+PK+ CDV +CEI R +K ++ PIS
Sbjct: 288 RYYQ--HSLGSIRKVNEYKSCSPFRSFGFLPKQICDVYKCEIGRVYKNENNSSI-RPISF 344
Query: 396 IVPRK-SDQFQDDLYPDTAAPVPALSAADWYKGVN 429
VPRK +FQ+DLYP P S+ +W G +
Sbjct: 345 YVPRKNPTKFQEDLYPPILMHDPERSSRNWIDGKD 379
|
Length = 568 |
| >gnl|CDD|149883 pfam08953, DUF1899, Domain of unknown function (DUF1899) | Back alignment and domain information |
|---|
Score = 119 bits (300), Expect = 5e-33
Identities = 37/64 (57%), Positives = 53/64 (82%)
Query: 88 RGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLP 147
R VRSSKFRHV+G +K++ CY+++ I++NA DS+FCA NPKF+AV+ E +GGGAF VLP
Sbjct: 1 RFVRSSKFRHVFGQPAKKEQCYEDIRISKNAWDSNFCAVNPKFLAVIWEASGGGAFAVLP 60
Query: 148 IHRV 151
+++
Sbjct: 61 LNKT 64
|
This set of domains is found in various eukaryotic proteins. Function is unknown. Length = 65 |
| >gnl|CDD|149883 pfam08953, DUF1899, Domain of unknown function (DUF1899) | Back alignment and domain information |
|---|
Score = 105 bits (265), Expect = 5e-28
Identities = 31/56 (55%), Positives = 47/56 (83%)
Query: 31 FRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHR 86
FRHV+G +K++ CY+++ I++NA DS+FCA NPKF+AV+ E +GGGAF VLP+++
Sbjct: 8 FRHVFGQPAKKEQCYEDIRISKNAWDSNFCAVNPKFLAVIWEASGGGAFAVLPLNK 63
|
This set of domains is found in various eukaryotic proteins. Function is unknown. Length = 65 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 87.0 bits (216), Expect = 5e-19
Identities = 53/196 (27%), Positives = 95/196 (48%), Gaps = 18/196 (9%)
Query: 151 VKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE 210
++LW + G + L GH V + + P +++S+ D I +WDV G+
Sbjct: 75 IRLWDLETGEC-------VRTLTGHTSYVSSVAFSPDGR-ILSSSSRDKTIKVWDVETGK 126
Query: 211 ALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVF 270
LT + H D +N ++F+ DG+ + ++ +D T+++ D RTG ++ H G +S F
Sbjct: 127 CLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNS-VAF 185
Query: 271 IGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDS-SSGVLFPYYDHDTRILFLAG 329
D +++++ SD + LW DL+T L T+ +GV + D +L +G
Sbjct: 186 SPDGEKLLSSS----SDGTIKLW---DLSTGKCLGTLRGHENGVNSVAFSPDGYLLA-SG 237
Query: 330 KGDGNIRYYELTNERP 345
DG IR ++L
Sbjct: 238 SEDGTIRVWDLRTGEC 253
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 74.7 bits (184), Expect = 7e-15
Identities = 48/197 (24%), Positives = 81/197 (41%), Gaps = 18/197 (9%)
Query: 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGK 208
+K+W + G L + L GH V + +AS D I LWD+
Sbjct: 31 GTIKVWDLETGEL-------LRTLKGHTGPVRDVAASADG-TYLASGSSDKTIRLWDLET 82
Query: 209 GEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKA 268
GE + + H ++ ++F+ DG L ++ +DKT++V D TG ++ H T +
Sbjct: 83 GECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGH--TDWVNS 140
Query: 269 VFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALET-VDSSSGVLFPYYDHDTRILFL 327
V G V + D + LW DL T + T + V + D L
Sbjct: 141 VAFSPDGTFVASS---SQDGTIKLW---DLRTGKCVATLTGHTGEVNSVAFSPDGEKLLS 194
Query: 328 AGKGDGNIRYYELTNER 344
+ DG I+ ++L+ +
Sbjct: 195 SS-SDGTIKLWDLSTGK 210
|
Length = 289 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 72.4 bits (176), Expect = 1e-13
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 8/180 (4%)
Query: 164 NLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVIN 223
+ I L GH V + + P + + + + D I LWD+ G+ L+ + H D ++
Sbjct: 143 TPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVS 202
Query: 224 CLSFNRDGSRLVTTC-KDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGF 282
L+F+ DG L+ + D T+R+ D TG ++ + S + F D + +
Sbjct: 203 SLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRS-TLSGHSDSVVSSFSPDGSLLASGS- 260
Query: 283 SRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTN 342
SD + LWD ++ L + SSS VL + D ++L DG +R ++L
Sbjct: 261 ---SDGTIRLWDLRSSSSLLRTLSGHSSS-VLSVAFSPDGKLLASGSS-DGTVRLWDLET 315
|
Length = 466 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 65.0 bits (159), Expect = 1e-11
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 151 VKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE 210
+KLW + G + + L GH+ V + + P ++AS D I +WD+ GE
Sbjct: 201 IKLWDLSTG-------KCLGTLRGHENGVNSVAFSPD-GYLLASGSEDGTIRVWDLRTGE 252
Query: 211 ALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRV 245
+ + H + + L+++ DG RL + D T+R+
Sbjct: 253 CVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRI 287
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 63.9 bits (156), Expect = 3e-11
Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 15/145 (10%)
Query: 151 VKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE 210
+KLW + G + L GH V + + P E +++S+ D I LWD+ G+
Sbjct: 159 IKLWDLRTGKC-------VATLTGHTGEVNSVAFSPDGEKLLSSSS-DGTIKLWDLSTGK 210
Query: 211 ALTVIDCHPDVINCLSFNRDGSRLVTTC-KDKTVRVLDPRTGLVISQGVCHPGTRSSKAV 269
L + H + +N ++F+ DG L+ + +D T+RV D RTG + H + +S A
Sbjct: 211 CLGTLRGHENGVNSVAFSPDG-YLLASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLA- 268
Query: 270 FIGDTGRIVTTGFSRHSDRQVGLWD 294
+ D R+ + D + +WD
Sbjct: 269 WSPDGKRLASGSA----DGTIRIWD 289
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 61.2 bits (149), Expect = 2e-10
Identities = 41/173 (23%), Positives = 71/173 (41%), Gaps = 11/173 (6%)
Query: 174 GHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSR 233
GH V + + P ++A+ D I +WD+ GE L + H + ++ + DG+
Sbjct: 7 GHTGGVTCVAFSPD-GKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTY 65
Query: 234 LVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLW 293
L + DKT+R+ D TG + H SS V GRI+++ D+ + +W
Sbjct: 66 LASGSSDKTIRLWDLETGECVRTLTGHTSYVSS--VAFSPDGRILSSSS---RDKTIKVW 120
Query: 294 DENDLNTPLALETVDSS-SGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERP 345
D L + V F D + + DG I+ ++L +
Sbjct: 121 DVETGKCLTTLRGHTDWVNSVAF---SPDGTFVA-SSSQDGTIKLWDLRTGKC 169
|
Length = 289 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 61.3 bits (147), Expect = 5e-10
Identities = 45/193 (23%), Positives = 74/193 (38%), Gaps = 15/193 (7%)
Query: 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDV-G 207
++LW + G L GH V + P +++AS D I LWD+
Sbjct: 221 GTIRLWDLSTG------KLLRSTLSGHSDSV-VSSFSPD-GSLLASGSSDGTIRLWDLRS 272
Query: 208 KGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSK 267
L + H + ++F+ DG L + D TVR+ D TG ++S
Sbjct: 273 SSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVS 332
Query: 268 AVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFL 327
++ G ++ +G S D + LWD LE + V F +
Sbjct: 333 SLSFSPDGSLLVSGGS--DDGTIRLWDLRTGKPLKTLEGHSNVLSVSF----SPDGRVVS 386
Query: 328 AGKGDGNIRYYEL 340
+G DG +R ++L
Sbjct: 387 SGSTDGTVRLWDL 399
|
Length = 466 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 60.1 bits (144), Expect = 1e-09
Identities = 55/304 (18%), Positives = 97/304 (31%), Gaps = 25/304 (8%)
Query: 6 RGPVLDIKWNPFNDNIIASCSDDCTFR-------HVYGVHSKRDGCYDNVPITRNAHDSH 58
V + ++P + + S D T + + ++ + +
Sbjct: 155 SESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLI 214
Query: 59 FCAANPKFVAVVTEVAGGGAFLVLPIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNA 118
++ + + G L H V S DG + +
Sbjct: 215 ASGSSDGTIRLWDLSTGKLLRSTLSGHSDSVVSSFSPDGSLLASGSSDG---TIRLWDLR 271
Query: 119 HDSHFCAANPKFVAVVTEVAGGGAFLVLPI----HRVKLWYIPDGGLSGNLNEWIMDLHG 174
S + V VA +L V+LW L + L G
Sbjct: 272 SSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLW-----DLETGKLLSSLTLKG 326
Query: 175 HKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRL 234
H+ V + + P +V+ D I LWD+ G+ L ++ H + +SF+ DG +
Sbjct: 327 HEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGH-SNVLSVSFSPDGRVV 385
Query: 235 VTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWD 294
+ D TVR+ D TG ++ H R + F D + + SD + LWD
Sbjct: 386 SSGSTDGTVRLWDLSTGSLLRNLDGHTS-RVTSLDFSPDGKSLASGS----SDNTIRLWD 440
Query: 295 ENDL 298
Sbjct: 441 LKTS 444
|
Length = 466 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 57.7 bits (140), Expect = 3e-09
Identities = 32/133 (24%), Positives = 51/133 (38%), Gaps = 10/133 (7%)
Query: 214 VIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGD 273
+ H + C++F+ DG L T D T++V D TG ++ H G D
Sbjct: 4 TLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPV-RDVAASAD 62
Query: 274 TGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSS-SGVLFPYYDHDTRILFLAGKGD 332
+ + SD+ + LWD L S S V F D RIL + D
Sbjct: 63 GTYLASGS----SDKTIRLWDLETGECVRTLTGHTSYVSSVAF---SPDGRIL-SSSSRD 114
Query: 333 GNIRYYELTNERP 345
I+ +++ +
Sbjct: 115 KTIKVWDVETGKC 127
|
Length = 289 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 47.4 bits (111), Expect = 1e-05
Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 5/134 (3%)
Query: 215 IDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTG--LVISQGVCHPGTRSSKAVFIG 272
+ H D I ++F+ DG L++ D T+++ D G L+ S H + S A+
Sbjct: 61 LRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSP 120
Query: 273 DTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGD 332
D I+ S D V LWD + + S V + D ++L D
Sbjct: 121 DGNSILLASSSL--DGTVKLWDLSTPGKLIR-TLEGHSESVTSLAFSPDGKLLASGSSLD 177
Query: 333 GNIRYYELTNERPY 346
G I+ ++L +P
Sbjct: 178 GTIKLWDLRTGKPL 191
|
Length = 466 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 2e-05
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 208 KGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLD 247
GE L + H + ++F+ DG L + D T+++ D
Sbjct: 1 SGELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 4e-05
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 209 GEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRV 245
G+ L + H + ++F+ DG+ L + D TVRV
Sbjct: 1 GKLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRV 37
|
Length = 39 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 494 | |||
| KOG0303|consensus | 472 | 100.0 | ||
| PTZ00421 | 493 | coronin; Provisional | 100.0 | |
| PTZ00420 | 568 | coronin; Provisional | 100.0 | |
| KOG1445|consensus | 1012 | 100.0 | ||
| KOG1445|consensus | 1012 | 100.0 | ||
| KOG0271|consensus | 480 | 100.0 | ||
| KOG0272|consensus | 459 | 100.0 | ||
| KOG0286|consensus | 343 | 100.0 | ||
| KOG0279|consensus | 315 | 100.0 | ||
| KOG0272|consensus | 459 | 100.0 | ||
| KOG0271|consensus | 480 | 100.0 | ||
| KOG0291|consensus | 893 | 100.0 | ||
| KOG0279|consensus | 315 | 100.0 | ||
| KOG0263|consensus | 707 | 100.0 | ||
| KOG0315|consensus | 311 | 100.0 | ||
| KOG0284|consensus | 464 | 100.0 | ||
| KOG0285|consensus | 460 | 100.0 | ||
| KOG0645|consensus | 312 | 100.0 | ||
| KOG0263|consensus | 707 | 100.0 | ||
| PTZ00420 | 568 | coronin; Provisional | 100.0 | |
| KOG0295|consensus | 406 | 100.0 | ||
| KOG0266|consensus | 456 | 100.0 | ||
| KOG0273|consensus | 524 | 100.0 | ||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 100.0 | |
| KOG0277|consensus | 311 | 100.0 | ||
| KOG0318|consensus | 603 | 100.0 | ||
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 99.98 | |
| KOG0284|consensus | 464 | 99.98 | ||
| KOG0265|consensus | 338 | 99.97 | ||
| KOG0319|consensus | 775 | 99.97 | ||
| KOG0273|consensus | 524 | 99.97 | ||
| KOG0283|consensus | 712 | 99.97 | ||
| KOG0316|consensus | 307 | 99.97 | ||
| KOG0291|consensus | 893 | 99.97 | ||
| KOG0318|consensus | 603 | 99.97 | ||
| KOG0319|consensus | 775 | 99.97 | ||
| KOG0285|consensus | 460 | 99.97 | ||
| KOG0286|consensus | 343 | 99.97 | ||
| KOG0278|consensus | 334 | 99.97 | ||
| KOG0296|consensus | 399 | 99.96 | ||
| KOG0313|consensus | 423 | 99.96 | ||
| KOG0282|consensus | 503 | 99.96 | ||
| KOG0264|consensus | 422 | 99.96 | ||
| KOG0295|consensus | 406 | 99.96 | ||
| KOG0292|consensus | 1202 | 99.96 | ||
| KOG0281|consensus | 499 | 99.96 | ||
| KOG1446|consensus | 311 | 99.96 | ||
| KOG0276|consensus | 794 | 99.96 | ||
| KOG0266|consensus | 456 | 99.96 | ||
| KOG0277|consensus | 311 | 99.96 | ||
| KOG0772|consensus | 641 | 99.96 | ||
| KOG0275|consensus | 508 | 99.96 | ||
| KOG0265|consensus | 338 | 99.96 | ||
| KOG2096|consensus | 420 | 99.96 | ||
| KOG0281|consensus | 499 | 99.96 | ||
| KOG0310|consensus | 487 | 99.96 | ||
| KOG0316|consensus | 307 | 99.95 | ||
| KOG0643|consensus | 327 | 99.95 | ||
| KOG0315|consensus | 311 | 99.95 | ||
| KOG0293|consensus | 519 | 99.95 | ||
| KOG0292|consensus | 1202 | 99.95 | ||
| KOG0288|consensus | 459 | 99.95 | ||
| KOG0640|consensus | 430 | 99.95 | ||
| KOG0313|consensus | 423 | 99.95 | ||
| KOG0645|consensus | 312 | 99.95 | ||
| KOG0264|consensus | 422 | 99.95 | ||
| KOG0268|consensus | 433 | 99.95 | ||
| KOG1407|consensus | 313 | 99.95 | ||
| KOG0299|consensus | 479 | 99.94 | ||
| PTZ00421 | 493 | coronin; Provisional | 99.94 | |
| KOG0282|consensus | 503 | 99.94 | ||
| KOG0305|consensus | 484 | 99.94 | ||
| KOG0276|consensus | 794 | 99.94 | ||
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 99.94 | |
| KOG0305|consensus | 484 | 99.94 | ||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.93 | |
| KOG0274|consensus | 537 | 99.93 | ||
| KOG0301|consensus | 745 | 99.93 | ||
| KOG0308|consensus | 735 | 99.93 | ||
| KOG1332|consensus | 299 | 99.93 | ||
| KOG0296|consensus | 399 | 99.93 | ||
| KOG0300|consensus | 481 | 99.93 | ||
| KOG0306|consensus | 888 | 99.93 | ||
| PF08954 | 136 | DUF1900: Domain of unknown function (DUF1900); Int | 99.93 | |
| KOG0973|consensus | 942 | 99.93 | ||
| KOG0306|consensus | 888 | 99.93 | ||
| KOG0289|consensus | 506 | 99.93 | ||
| KOG0274|consensus | 537 | 99.92 | ||
| KOG4283|consensus | 397 | 99.92 | ||
| KOG1274|consensus | 933 | 99.92 | ||
| KOG0310|consensus | 487 | 99.92 | ||
| KOG1446|consensus | 311 | 99.92 | ||
| KOG0641|consensus | 350 | 99.92 | ||
| KOG0294|consensus | 362 | 99.92 | ||
| KOG0289|consensus | 506 | 99.92 | ||
| KOG2055|consensus | 514 | 99.92 | ||
| KOG0643|consensus | 327 | 99.92 | ||
| KOG0293|consensus | 519 | 99.92 | ||
| KOG0283|consensus | 712 | 99.91 | ||
| KOG0300|consensus | 481 | 99.91 | ||
| KOG0275|consensus | 508 | 99.91 | ||
| KOG0299|consensus | 479 | 99.91 | ||
| KOG1407|consensus | 313 | 99.91 | ||
| KOG0647|consensus | 347 | 99.91 | ||
| KOG0269|consensus | 839 | 99.91 | ||
| KOG1539|consensus | 910 | 99.91 | ||
| KOG0641|consensus | 350 | 99.91 | ||
| KOG0639|consensus | 705 | 99.9 | ||
| KOG0269|consensus | 839 | 99.9 | ||
| KOG1408|consensus | 1080 | 99.9 | ||
| KOG0973|consensus | 942 | 99.9 | ||
| KOG0278|consensus | 334 | 99.9 | ||
| KOG0647|consensus | 347 | 99.9 | ||
| KOG0640|consensus | 430 | 99.9 | ||
| KOG0270|consensus | 463 | 99.89 | ||
| KOG0772|consensus | 641 | 99.89 | ||
| KOG0302|consensus | 440 | 99.89 | ||
| KOG0302|consensus | 440 | 99.89 | ||
| KOG1036|consensus | 323 | 99.88 | ||
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 99.88 | |
| KOG0288|consensus | 459 | 99.88 | ||
| KOG0268|consensus | 433 | 99.88 | ||
| KOG2106|consensus | 626 | 99.88 | ||
| KOG1063|consensus | 764 | 99.88 | ||
| KOG0308|consensus | 735 | 99.88 | ||
| KOG1034|consensus | 385 | 99.88 | ||
| KOG2445|consensus | 361 | 99.87 | ||
| KOG0270|consensus | 463 | 99.87 | ||
| KOG0267|consensus | 825 | 99.87 | ||
| KOG2106|consensus | 626 | 99.87 | ||
| KOG1063|consensus | 764 | 99.87 | ||
| KOG0301|consensus | 745 | 99.87 | ||
| KOG1408|consensus | 1080 | 99.87 | ||
| KOG0267|consensus | 825 | 99.87 | ||
| KOG1036|consensus | 323 | 99.87 | ||
| KOG4283|consensus | 397 | 99.86 | ||
| KOG0646|consensus | 476 | 99.86 | ||
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 99.86 | |
| KOG0303|consensus | 472 | 99.85 | ||
| KOG2919|consensus | 406 | 99.85 | ||
| KOG0646|consensus | 476 | 99.85 | ||
| KOG1273|consensus | 405 | 99.85 | ||
| KOG0650|consensus | 733 | 99.84 | ||
| KOG0639|consensus | 705 | 99.84 | ||
| KOG4328|consensus | 498 | 99.83 | ||
| KOG1539|consensus | 910 | 99.83 | ||
| KOG4378|consensus | 673 | 99.83 | ||
| KOG0321|consensus | 720 | 99.83 | ||
| KOG1332|consensus | 299 | 99.82 | ||
| KOG0307|consensus | 1049 | 99.82 | ||
| KOG1310|consensus | 758 | 99.82 | ||
| KOG0321|consensus | 720 | 99.82 | ||
| KOG2096|consensus | 420 | 99.81 | ||
| KOG4328|consensus | 498 | 99.81 | ||
| KOG2048|consensus | 691 | 99.81 | ||
| KOG4378|consensus | 673 | 99.81 | ||
| KOG1273|consensus | 405 | 99.81 | ||
| KOG0294|consensus | 362 | 99.81 | ||
| KOG1009|consensus | 434 | 99.78 | ||
| KOG1274|consensus | 933 | 99.77 | ||
| KOG1188|consensus | 376 | 99.77 | ||
| KOG0644|consensus | 1113 | 99.77 | ||
| KOG1007|consensus | 370 | 99.76 | ||
| KOG0322|consensus | 323 | 99.76 | ||
| KOG2445|consensus | 361 | 99.76 | ||
| KOG0290|consensus | 364 | 99.76 | ||
| KOG0642|consensus | 577 | 99.75 | ||
| COG2319 | 466 | FOG: WD40 repeat [General function prediction only | 99.75 | |
| KOG2919|consensus | 406 | 99.74 | ||
| KOG0307|consensus | 1049 | 99.74 | ||
| KOG4227|consensus | 609 | 99.74 | ||
| KOG2048|consensus | 691 | 99.74 | ||
| KOG1963|consensus | 792 | 99.74 | ||
| KOG0771|consensus | 398 | 99.73 | ||
| KOG1007|consensus | 370 | 99.73 | ||
| KOG2139|consensus | 445 | 99.72 | ||
| KOG1524|consensus | 737 | 99.7 | ||
| KOG1587|consensus | 555 | 99.69 | ||
| KOG2055|consensus | 514 | 99.69 | ||
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 99.68 | |
| KOG0649|consensus | 325 | 99.67 | ||
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 99.67 | |
| KOG0650|consensus | 733 | 99.67 | ||
| KOG1517|consensus | 1387 | 99.66 | ||
| KOG2110|consensus | 391 | 99.66 | ||
| KOG2139|consensus | 445 | 99.66 | ||
| KOG0290|consensus | 364 | 99.66 | ||
| COG2319 | 466 | FOG: WD40 repeat [General function prediction only | 99.65 | |
| KOG1009|consensus | 434 | 99.63 | ||
| KOG1034|consensus | 385 | 99.63 | ||
| KOG0649|consensus | 325 | 99.63 | ||
| KOG1188|consensus | 376 | 99.63 | ||
| KOG1538|consensus | 1081 | 99.62 | ||
| KOG1587|consensus | 555 | 99.62 | ||
| KOG1310|consensus | 758 | 99.61 | ||
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 99.6 | |
| KOG1538|consensus | 1081 | 99.59 | ||
| KOG4227|consensus | 609 | 99.58 | ||
| KOG0322|consensus | 323 | 99.58 | ||
| KOG0642|consensus | 577 | 99.57 | ||
| KOG2110|consensus | 391 | 99.57 | ||
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 99.56 | |
| KOG2321|consensus | 703 | 99.55 | ||
| KOG1334|consensus | 559 | 99.55 | ||
| KOG1272|consensus | 545 | 99.55 | ||
| KOG1523|consensus | 361 | 99.55 | ||
| KOG1517|consensus | 1387 | 99.54 | ||
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 99.53 | |
| KOG0644|consensus | 1113 | 99.52 | ||
| KOG1240|consensus | 1431 | 99.52 | ||
| KOG1524|consensus | 737 | 99.52 | ||
| KOG0771|consensus | 398 | 99.52 | ||
| KOG2321|consensus | 703 | 99.52 | ||
| KOG1523|consensus | 361 | 99.51 | ||
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 99.51 | |
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 99.51 | |
| KOG1272|consensus | 545 | 99.5 | ||
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 99.5 | |
| KOG3881|consensus | 412 | 99.48 | ||
| KOG1963|consensus | 792 | 99.48 | ||
| KOG4497|consensus | 447 | 99.47 | ||
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 99.46 | |
| KOG2394|consensus | 636 | 99.45 | ||
| KOG1240|consensus | 1431 | 99.45 | ||
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 99.44 | |
| KOG2394|consensus | 636 | 99.42 | ||
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 99.42 | |
| KOG2111|consensus | 346 | 99.41 | ||
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 99.41 | |
| KOG2111|consensus | 346 | 99.4 | ||
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 99.39 | |
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 99.38 | |
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 99.34 | |
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 99.33 | |
| KOG1409|consensus | 404 | 99.32 | ||
| KOG0974|consensus | 967 | 99.31 | ||
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 99.31 | |
| KOG2315|consensus | 566 | 99.3 | ||
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 99.3 | |
| KOG1334|consensus | 559 | 99.29 | ||
| KOG4547|consensus | 541 | 99.29 | ||
| KOG3881|consensus | 412 | 99.28 | ||
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 99.27 | |
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 99.26 | |
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 99.25 | |
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 99.25 | |
| KOG0280|consensus | 339 | 99.23 | ||
| KOG1354|consensus | 433 | 99.2 | ||
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 99.2 | |
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 99.19 | |
| KOG0280|consensus | 339 | 99.16 | ||
| KOG0974|consensus | 967 | 99.15 | ||
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 99.15 | |
| KOG1354|consensus | 433 | 99.14 | ||
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 99.14 | |
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 99.13 | |
| KOG1064|consensus | 2439 | 99.13 | ||
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 99.13 | |
| KOG4547|consensus | 541 | 99.12 | ||
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 99.1 | |
| KOG4190|consensus | 1034 | 99.08 | ||
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 99.08 | |
| PF08953 | 65 | DUF1899: Domain of unknown function (DUF1899); Int | 99.07 | |
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 99.01 | |
| KOG4497|consensus | 447 | 99.01 | ||
| KOG0309|consensus | 1081 | 98.97 | ||
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 98.96 | |
| KOG1064|consensus | 2439 | 98.95 | ||
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 98.93 | |
| KOG2314|consensus | 698 | 98.91 | ||
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 98.88 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 98.86 | |
| KOG4532|consensus | 344 | 98.84 | ||
| COG5170 | 460 | CDC55 Serine/threonine protein phosphatase 2A, reg | 98.83 | |
| KOG2695|consensus | 425 | 98.83 | ||
| KOG2315|consensus | 566 | 98.82 | ||
| KOG4714|consensus | 319 | 98.81 | ||
| KOG0309|consensus | 1081 | 98.79 | ||
| KOG2695|consensus | 425 | 98.79 | ||
| PF00400 | 39 | WD40: WD domain, G-beta repeat; InterPro: IPR01978 | 98.75 | |
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 98.75 | |
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 98.75 | |
| KOG3914|consensus | 390 | 98.73 | ||
| KOG2041|consensus | 1189 | 98.71 | ||
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 98.69 | |
| COG5170 | 460 | CDC55 Serine/threonine protein phosphatase 2A, reg | 98.69 | |
| PF15492 | 282 | Nbas_N: Neuroblastoma-amplified sequence, N termin | 98.66 | |
| KOG2314|consensus | 698 | 98.66 | ||
| PF00400 | 39 | WD40: WD domain, G-beta repeat; InterPro: IPR01978 | 98.66 | |
| KOG1275|consensus | 1118 | 98.65 | ||
| KOG1409|consensus | 404 | 98.64 | ||
| KOG4190|consensus | 1034 | 98.64 | ||
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 98.63 | |
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 98.63 | |
| KOG1645|consensus | 463 | 98.61 | ||
| PF15492 | 282 | Nbas_N: Neuroblastoma-amplified sequence, N termin | 98.61 | |
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 98.59 | |
| KOG4532|consensus | 344 | 98.58 | ||
| KOG1275|consensus | 1118 | 98.57 | ||
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 98.55 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 98.51 | |
| KOG0882|consensus | 558 | 98.49 | ||
| KOG1912|consensus | 1062 | 98.47 | ||
| KOG3914|consensus | 390 | 98.44 | ||
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 98.41 | |
| PF11768 | 545 | DUF3312: Protein of unknown function (DUF3312); In | 98.4 | |
| KOG2041|consensus | 1189 | 98.35 | ||
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 98.33 | |
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 98.31 | |
| KOG4714|consensus | 319 | 98.31 | ||
| KOG1008|consensus | 783 | 98.31 | ||
| KOG3617|consensus | 1416 | 98.3 | ||
| KOG2066|consensus | 846 | 98.28 | ||
| PF06977 | 248 | SdiA-regulated: SdiA-regulated; InterPro: IPR00972 | 98.25 | |
| KOG1912|consensus | 1062 | 98.23 | ||
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 98.22 | |
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 98.21 | |
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 98.19 | |
| KOG1920|consensus | 1265 | 98.18 | ||
| KOG1832|consensus | 1516 | 98.16 | ||
| KOG2114|consensus | 933 | 98.15 | ||
| KOG1645|consensus | 463 | 98.14 | ||
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 98.12 | |
| PF08596 | 395 | Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; | 98.1 | |
| PF11768 | 545 | DUF3312: Protein of unknown function (DUF3312); In | 98.04 | |
| KOG1008|consensus | 783 | 98.01 | ||
| KOG2114|consensus | 933 | 98.01 | ||
| KOG1920|consensus | 1265 | 97.97 | ||
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 97.95 | |
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 97.95 | |
| PF08953 | 65 | DUF1899: Domain of unknown function (DUF1899); Int | 97.93 | |
| COG3391 | 381 | Uncharacterized conserved protein [Function unknow | 97.92 | |
| KOG4640|consensus | 665 | 97.85 | ||
| COG3391 | 381 | Uncharacterized conserved protein [Function unknow | 97.84 | |
| KOG2066|consensus | 846 | 97.8 | ||
| KOG1832|consensus | 1516 | 97.79 | ||
| PF04841 | 410 | Vps16_N: Vps16, N-terminal region; InterPro: IPR00 | 97.76 | |
| COG3204 | 316 | Uncharacterized protein conserved in bacteria [Fun | 97.71 | |
| KOG0882|consensus | 558 | 97.68 | ||
| smart00320 | 40 | WD40 WD40 repeats. Note that these repeats are per | 97.63 | |
| PF00930 | 353 | DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin | 97.62 | |
| PF04053 | 443 | Coatomer_WDAD: Coatomer WD associated region ; Int | 97.56 | |
| PF06977 | 248 | SdiA-regulated: SdiA-regulated; InterPro: IPR00972 | 97.53 | |
| PF08553 | 794 | VID27: VID27 cytoplasmic protein; InterPro: IPR013 | 97.49 | |
| PF14783 | 111 | BBS2_Mid: Ciliary BBSome complex subunit 2, middle | 97.47 | |
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 97.43 | |
| PF08553 | 794 | VID27: VID27 cytoplasmic protein; InterPro: IPR013 | 97.42 | |
| PF02897 | 414 | Peptidase_S9_N: Prolyl oligopeptidase, N-terminal | 97.41 | |
| PF03178 | 321 | CPSF_A: CPSF A subunit region; InterPro: IPR004871 | 97.4 | |
| PF03178 | 321 | CPSF_A: CPSF A subunit region; InterPro: IPR004871 | 97.37 | |
| smart00320 | 40 | WD40 WD40 repeats. Note that these repeats are per | 97.36 | |
| PRK13616 | 591 | lipoprotein LpqB; Provisional | 97.35 | |
| PF05694 | 461 | SBP56: 56kDa selenium binding protein (SBP56); Int | 97.35 | |
| KOG2395|consensus | 644 | 97.34 | ||
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 97.32 | |
| KOG4649|consensus | 354 | 97.26 | ||
| PF00930 | 353 | DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin | 97.18 | |
| PF05694 | 461 | SBP56: 56kDa selenium binding protein (SBP56); Int | 97.14 | |
| KOG2395|consensus | 644 | 97.13 | ||
| PF00780 | 275 | CNH: CNH domain; InterPro: IPR001180 Based on sequ | 97.05 | |
| PF00780 | 275 | CNH: CNH domain; InterPro: IPR001180 Based on sequ | 97.05 | |
| KOG2079|consensus | 1206 | 96.98 | ||
| COG3204 | 316 | Uncharacterized protein conserved in bacteria [Fun | 96.98 | |
| PF14783 | 111 | BBS2_Mid: Ciliary BBSome complex subunit 2, middle | 96.96 | |
| KOG1897|consensus | 1096 | 96.92 | ||
| KOG3621|consensus | 726 | 96.9 | ||
| PF08596 | 395 | Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; | 96.84 | |
| KOG2079|consensus | 1206 | 96.77 | ||
| PRK10115 | 686 | protease 2; Provisional | 96.77 | |
| KOG4640|consensus | 665 | 96.75 | ||
| PF02897 | 414 | Peptidase_S9_N: Prolyl oligopeptidase, N-terminal | 96.75 | |
| TIGR03118 | 336 | PEPCTERM_chp_1 conserved hypothetical protein TIGR | 96.74 | |
| PF04053 | 443 | Coatomer_WDAD: Coatomer WD associated region ; Int | 96.69 | |
| KOG3621|consensus | 726 | 96.65 | ||
| PF14583 | 386 | Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C | 96.59 | |
| PF04841 | 410 | Vps16_N: Vps16, N-terminal region; InterPro: IPR00 | 96.57 | |
| KOG3630|consensus | 1405 | 96.53 | ||
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 96.52 | |
| PHA02713 | 557 | hypothetical protein; Provisional | 96.5 | |
| COG3490 | 366 | Uncharacterized protein conserved in bacteria [Fun | 96.44 | |
| PF05096 | 264 | Glu_cyclase_2: Glutamine cyclotransferase; InterPr | 96.4 | |
| KOG3617|consensus | 1416 | 96.35 | ||
| PF14583 | 386 | Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C | 96.32 | |
| PF10647 | 253 | Gmad1: Lipoprotein LpqB beta-propeller domain; Int | 96.26 | |
| PF14870 | 302 | PSII_BNR: Photosynthesis system II assembly factor | 96.19 | |
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 96.17 | |
| PHA02713 | 557 | hypothetical protein; Provisional | 96.14 | |
| PF12894 | 47 | Apc4_WD40: Anaphase-promoting complex subunit 4 WD | 96.13 | |
| PRK13616 | 591 | lipoprotein LpqB; Provisional | 96.04 | |
| cd00216 | 488 | PQQ_DH Dehydrogenases with pyrrolo-quinoline quino | 96.04 | |
| PF12894 | 47 | Apc4_WD40: Anaphase-promoting complex subunit 4 WD | 96.01 | |
| KOG4649|consensus | 354 | 95.94 | ||
| KOG2444|consensus | 238 | 95.93 | ||
| TIGR02604 | 367 | Piru_Ver_Nterm putative membrane-bound dehydrogena | 95.88 | |
| KOG4441|consensus | 571 | 95.75 | ||
| KOG4441|consensus | 571 | 95.74 | ||
| KOG4499|consensus | 310 | 95.72 | ||
| COG3490 | 366 | Uncharacterized protein conserved in bacteria [Fun | 95.56 | |
| cd00216 | 488 | PQQ_DH Dehydrogenases with pyrrolo-quinoline quino | 95.49 | |
| PF15390 | 671 | DUF4613: Domain of unknown function (DUF4613) | 95.47 | |
| PF12234 | 631 | Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0 | 95.3 | |
| PF05096 | 264 | Glu_cyclase_2: Glutamine cyclotransferase; InterPr | 95.25 | |
| KOG2444|consensus | 238 | 95.12 | ||
| PHA03098 | 534 | kelch-like protein; Provisional | 95.07 | |
| TIGR02604 | 367 | Piru_Ver_Nterm putative membrane-bound dehydrogena | 95.07 | |
| PF07995 | 331 | GSDH: Glucose / Sorbosone dehydrogenase; InterPro: | 95.07 | |
| PF10647 | 253 | Gmad1: Lipoprotein LpqB beta-propeller domain; Int | 95.03 | |
| PF14781 | 136 | BBS2_N: Ciliary BBSome complex subunit 2, N-termin | 95.02 | |
| PHA03098 | 534 | kelch-like protein; Provisional | 94.86 | |
| PF06433 | 342 | Me-amine-dh_H: Methylamine dehydrogenase heavy cha | 94.85 | |
| PHA02790 | 480 | Kelch-like protein; Provisional | 94.82 | |
| KOG3630|consensus | 1405 | 94.61 | ||
| PF12234 | 631 | Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0 | 94.54 | |
| TIGR03074 | 764 | PQQ_membr_DH membrane-bound PQQ-dependent dehydrog | 94.52 | |
| KOG2377|consensus | 657 | 94.39 | ||
| PF06433 | 342 | Me-amine-dh_H: Methylamine dehydrogenase heavy cha | 94.38 | |
| COG5167 | 776 | VID27 Protein involved in vacuole import and degra | 94.32 | |
| TIGR03075 | 527 | PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan | 94.31 | |
| PF10313 | 43 | DUF2415: Uncharacterised protein domain (DUF2415); | 94.17 | |
| PF15390 | 671 | DUF4613: Domain of unknown function (DUF4613) | 94.1 | |
| KOG4499|consensus | 310 | 93.89 | ||
| PRK13684 | 334 | Ycf48-like protein; Provisional | 93.8 | |
| PHA02790 | 480 | Kelch-like protein; Provisional | 93.57 | |
| KOG1897|consensus | 1096 | 93.39 | ||
| PF14870 | 302 | PSII_BNR: Photosynthesis system II assembly factor | 93.26 | |
| PF10313 | 43 | DUF2415: Uncharacterised protein domain (DUF2415); | 93.16 | |
| PF14655 | 415 | RAB3GAP2_N: Rab3 GTPase-activating protein regulat | 92.97 | |
| COG5276 | 370 | Uncharacterized conserved protein [Function unknow | 92.82 | |
| PF14655 | 415 | RAB3GAP2_N: Rab3 GTPase-activating protein regulat | 92.59 | |
| TIGR03075 | 527 | PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan | 92.39 | |
| COG5276 | 370 | Uncharacterized conserved protein [Function unknow | 92.3 | |
| TIGR03548 | 323 | mutarot_permut cyclically-permuted mutatrotase fam | 92.25 | |
| PF14761 | 215 | HPS3_N: Hermansky-Pudlak syndrome 3 | 92.08 | |
| PF12768 | 281 | Rax2: Cortical protein marker for cell polarity | 91.99 | |
| PF07250 | 243 | Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP | 91.92 | |
| PLN00033 | 398 | photosystem II stability/assembly factor; Provisio | 91.63 | |
| KOG2280|consensus | 829 | 91.63 | ||
| KOG2377|consensus | 657 | 91.58 | ||
| PF14761 | 215 | HPS3_N: Hermansky-Pudlak syndrome 3 | 91.51 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 91.26 | |
| PF02333 | 381 | Phytase: Phytase; InterPro: IPR003431 Phytase (3.1 | 90.77 | |
| COG4257 | 353 | Vgb Streptogramin lyase [Defense mechanisms] | 90.45 | |
| PF12768 | 281 | Rax2: Cortical protein marker for cell polarity | 90.42 | |
| COG4590 | 733 | ABC-type uncharacterized transport system, permeas | 89.86 | |
| PF14727 | 418 | PHTB1_N: PTHB1 N-terminus | 89.8 | |
| COG3823 | 262 | Glutamine cyclotransferase [Posttranslational modi | 89.63 | |
| KOG2280|consensus | 829 | 89.57 | ||
| COG3823 | 262 | Glutamine cyclotransferase [Posttranslational modi | 89.54 | |
| KOG1916|consensus | 1283 | 89.53 | ||
| TIGR02276 | 42 | beta_rpt_yvtn 40-residue YVTN family beta-propelle | 89.37 | |
| PF11715 | 547 | Nup160: Nucleoporin Nup120/160; InterPro: IPR02171 | 89.28 | |
| PF13449 | 326 | Phytase-like: Esterase-like activity of phytase | 89.18 | |
| COG4257 | 353 | Vgb Streptogramin lyase [Defense mechanisms] | 89.17 | |
| PF07995 | 331 | GSDH: Glucose / Sorbosone dehydrogenase; InterPro: | 88.94 | |
| PLN02193 | 470 | nitrile-specifier protein | 88.89 | |
| KOG4460|consensus | 741 | 88.45 | ||
| PF10214 | 765 | Rrn6: RNA polymerase I-specific transcription-init | 88.19 | |
| PF14727 | 418 | PHTB1_N: PTHB1 N-terminus | 88.09 | |
| TIGR02276 | 42 | beta_rpt_yvtn 40-residue YVTN family beta-propelle | 88.02 | |
| PF08728 | 717 | CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans | 87.88 | |
| PLN02153 | 341 | epithiospecifier protein | 87.33 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 87.02 | |
| PF07676 | 39 | PD40: WD40-like Beta Propeller Repeat; InterPro: I | 86.97 | |
| PF14781 | 136 | BBS2_N: Ciliary BBSome complex subunit 2, N-termin | 86.85 | |
| KOG2247|consensus | 615 | 86.59 | ||
| PF07569 | 219 | Hira: TUP1-like enhancer of split; InterPro: IPR01 | 86.34 | |
| KOG4460|consensus | 741 | 86.03 | ||
| KOG1898|consensus | 1205 | 85.9 | ||
| PF07250 | 243 | Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP | 85.25 | |
| TIGR03074 | 764 | PQQ_membr_DH membrane-bound PQQ-dependent dehydrog | 85.19 | |
| PF07569 | 219 | Hira: TUP1-like enhancer of split; InterPro: IPR01 | 85.02 | |
| COG5167 | 776 | VID27 Protein involved in vacuole import and degra | 84.51 | |
| PRK10115 | 686 | protease 2; Provisional | 83.97 | |
| KOG1916|consensus | 1283 | 82.63 | ||
| PF07676 | 39 | PD40: WD40-like Beta Propeller Repeat; InterPro: I | 81.18 | |
| PF08728 | 717 | CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans | 81.05 | |
| PF01731 | 86 | Arylesterase: Arylesterase; InterPro: IPR002640 Th | 80.71 | |
| PLN00033 | 398 | photosystem II stability/assembly factor; Provisio | 80.5 |
| >KOG0303|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-69 Score=473.26 Aligned_cols=353 Identities=58% Similarity=1.073 Sum_probs=342.9
Q ss_pred ccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCc-----------------
Q psy14130 88 RGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHR----------------- 150 (494)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~----------------- 150 (494)
++++++||+|+|+...+++.||++++++..+||..+|+.||+++|+++.+++||.++|.+.++
T Consensus 4 ~~vR~SKfRHVFgq~~K~e~CYddIrVs~~tWDS~fcavNPkfiAvi~easgGgaf~ViPl~k~Gr~d~~~P~v~GHt~~ 83 (472)
T KOG0303|consen 4 HVVRSSKFRHVFGQPVKNDQCYDDIRVSRVTWDSSFCAVNPKFVAVIIEASGGGAFLVIPLVKTGRMDASYPLVCGHTAP 83 (472)
T ss_pred hhhhhhhhHHHhccccchhhhhcceeeeeeeccccccccCCceEEEEEecCCCcceeecccccccccCCCCCCccCcccc
Confidence 567999999999999999999999999999999999999999999999999999999999887
Q ss_pred ----------------------EEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCC
Q psy14130 151 ----------------------VKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGK 208 (494)
Q Consensus 151 ----------------------v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~ 208 (494)
|+||+++.+.+...+.+++..|.||..+|..++|||...++|+|++.|.+|.+||+.+
T Consensus 84 vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~t 163 (472)
T KOG0303|consen 84 VLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGT 163 (472)
T ss_pred ccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceEEEEeccC
Confidence 9999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCc
Q psy14130 209 GEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDR 288 (494)
Q Consensus 209 ~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~ 288 (494)
|+.+.++. |.+.|+++.|+.||++|+++++|++|||||.++++.+.+-.+|.+.+..++.|..++ .++++||++.+++
T Consensus 164 geali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG~k~~Raifl~~g-~i~tTGfsr~seR 241 (472)
T KOG0303|consen 164 GEALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGAKPARAIFLASG-KIFTTGFSRMSER 241 (472)
T ss_pred CceeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccCCCcceeEEeccC-ceeeecccccccc
Confidence 99999988 999999999999999999999999999999999999999999999999999999995 5999999999999
Q ss_pred eEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCC
Q psy14130 289 QVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKR 368 (494)
Q Consensus 289 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~ 368 (494)
++-+||..+...+..+..++.+++|..+.|++|.+.+|++|.+|+.||.|++....++.++++.+.+..+.+++.|.|++
T Consensus 242 q~aLwdp~nl~eP~~~~elDtSnGvl~PFyD~dt~ivYl~GKGD~~IRYyEit~d~P~~hyln~f~S~epQRG~g~mPKR 321 (472)
T KOG0303|consen 242 QIALWDPNNLEEPIALQELDTSNGVLLPFYDPDTSIVYLCGKGDSSIRYFEITNEPPFVHYLNTFSSKEPQRGMGFMPKR 321 (472)
T ss_pred ceeccCcccccCcceeEEeccCCceEEeeecCCCCEEEEEecCCcceEEEEecCCCceeEEecccccCCccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeccceeEEEEeeCCCCeEEEeEEEeeCCCCCCCCCCCCCCCCCCcccCHhhhcCCCCCCCeEeccCCCCccc
Q psy14130 369 GCDVTQCEIFRFFKLHTTRNMCEPISMIVPRKSDQFQDDLYPDTAAPVPALSAADWYKGVNRPPVLMSMRTGVNVC 444 (494)
Q Consensus 369 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pr~~~~~~~~~~~~~~~~~~~~~~~~w~~g~~~~~~~~sl~~~~~~~ 444 (494)
.+.++.+++.|+|++.+ + .|+||+|+|||||+.||+|+||++++.+|+|+|+||++|++.+|+++||++++.+.
T Consensus 322 Gl~Vs~cEI~rfyKl~~-~-~~epIsm~VPRkSdlFQeDlYPdt~~~~paLtAEEW~sGkda~Pilisl~~~y~~~ 395 (472)
T KOG0303|consen 322 GLDVSKCEIARFYKLHE-R-KCEPISMTVPRKSDLFQEDLYPDTPGPEPALTAEEWLSGKDADPILISLRDGYVPP 395 (472)
T ss_pred cccchHHHHHHHHHhhc-c-eeeeEEEeccccchhhhhccCCCCCCCCccccHHHhhcCCCCCCeEEEcccccccc
Confidence 99999999999999999 4 89999999999999999999999999999999999999999999999999988754
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-53 Score=414.45 Aligned_cols=348 Identities=38% Similarity=0.670 Sum_probs=302.0
Q ss_pred cCCCCceeecccCCccceeeceeccCCccC-CCeeeeCCceEEEEEeecCCcEEE-------------------------
Q psy14130 91 RSSKFRHVYGVHSKRDGCYDNVPITRNAHD-SHFCAANPKFVAVVTEVAGGGAFL------------------------- 144 (494)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~------------------------- 144 (494)
..+||||+++.+.+++.||.++++....++ .++++.|++++++.+...+++.++
T Consensus 2 ~~sk~rh~~g~~~k~~~~~~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v 81 (493)
T PTZ00421 2 SVSRFRHTQGVPARPDRHFLNVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDV 81 (493)
T ss_pred CcccccccccccCCcccceeccccccccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEE
Confidence 468999999999999999999999998888 788999999999888654433221
Q ss_pred -----------EE-EcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEE
Q psy14130 145 -----------VL-PIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEAL 212 (494)
Q Consensus 145 -----------~~-~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~ 212 (494)
.. .+++|+|||+.++........++..+.+|...|.+++|+|++.++|++|+.|++|+|||+++++.+
T Consensus 82 ~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~ 161 (493)
T PTZ00421 82 AFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAV 161 (493)
T ss_pred EEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEE
Confidence 00 122399999987755444446778899999999999999987679999999999999999999999
Q ss_pred EEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEE
Q psy14130 213 TVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGL 292 (494)
Q Consensus 213 ~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~i 292 (494)
..+.+|...|.+++|+|+|++|++++.|++|++||+++++.+..+.+|.+.....+.|.++++.++++|++++.|++|++
T Consensus 162 ~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~Vkl 241 (493)
T PTZ00421 162 EVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIML 241 (493)
T ss_pred EEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEE
Confidence 99999999999999999999999999999999999999999999999987756788899998899999987778999999
Q ss_pred EeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceee
Q psy14130 293 WDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDV 372 (494)
Q Consensus 293 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~ 372 (494)
||+++...+......+....+..+.|+++++.|+++|.+|+.|++||+.+++.+.. ..+.+..++++++|.|+..+.+
T Consensus 242 WDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~~--~~~~s~~~~~g~~~~pk~~~dv 319 (493)
T PTZ00421 242 WDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLTFC--SSYSSVEPHKGLCMMPKWSLDT 319 (493)
T ss_pred EeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceEEE--eeccCCCCCcceEecccccccc
Confidence 99998776665554555566777899999999967676899999999999886433 3455677899999999999999
Q ss_pred eccceeEEEEeeCCCCeEEEeEEEeeCCC--CCCCCCCCCCCCCCCcccCHhhhcCCCCCCCeEeccCCCCc
Q psy14130 373 TQCEIFRFFKLHTTRNMCEPISMIVPRKS--DQFQDDLYPDTAAPVPALSAADWYKGVNRPPVLMSMRTGVN 442 (494)
Q Consensus 373 ~~~~~~~~~~l~~~~~~~~~~~~~~pr~~--~~~~~~~~~~~~~~~~~~~~~~w~~g~~~~~~~~sl~~~~~ 442 (494)
..+|+.|+|+++. +.++||+|.||||+ +.||+|+||++++.+|+++++||++|.|.+|.++||++.+.
T Consensus 320 ~~~Ei~r~~~l~~--~~i~pis~~vpRk~~~~~fq~DlyP~t~~~~p~~ta~ew~~G~~~~p~~~sl~~~~~ 389 (493)
T PTZ00421 320 RKCEIARFYALTY--HSLYTIQMLLPRKQADSELQVDVYPPTFADHPAITADEYFSGGNAEPLVYDMSAVFD 389 (493)
T ss_pred cceeeeEEEEecC--CeEEEEEEEeccCCCccccccccCCCCCCCCCccCHHHHhCCCCCCCeEEEchhhcc
Confidence 9999999999976 47999999999995 69999999999999999999999999999999999998665
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-51 Score=402.28 Aligned_cols=377 Identities=30% Similarity=0.559 Sum_probs=300.8
Q ss_pred EEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEEeccccccccCCCCceeecccCCccceee
Q psy14130 31 FRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRFRGVRSSKFRHVYGVHSKRDGCYD 110 (494)
Q Consensus 31 vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (494)
+|++|.- ....++.++++....++...+++++++.++.|...+||.+.++++..... ...
T Consensus 7 ~~~~~~~--~~~~~y~diri~~~~~~s~~ia~n~~~~A~~w~~~gGG~~gvI~L~~~~r-----~~~------------- 66 (568)
T PTZ00420 7 IKNLYPD--PSNNLFDDLRICSRVIDSCGIACSSGFVAVPWEVEGGGLIGAIRLENQMR-----KPP------------- 66 (568)
T ss_pred hhhcCCc--hhhCeeccEEccccccCceeEeeCCCeEEEEEEcCCCCceeEEEeeecCC-----Cce-------------
Confidence 3445542 33456889999888899999999999999999999999888877653210 000
Q ss_pred ceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCC-CCCcccceEecccccccEEEEEEcCCCC
Q psy14130 111 NVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGL-SGNLNEWIMDLHGHKRRVGYIEWHPTAE 189 (494)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~-~~~~~~~~~~~~~h~~~V~~~~~~p~~~ 189 (494)
...+..+...+..+.|+|..-.++..++.+ ++|+|||+.++.. ...+..++..+.+|...|.+++|+|++.
T Consensus 67 v~~L~gH~~~V~~lafsP~~~~lLASgS~D--------gtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~ 138 (568)
T PTZ00420 67 VIKLKGHTSSILDLQFNPCFSEILASGSED--------LTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNY 138 (568)
T ss_pred EEEEcCCCCCEEEEEEcCCCCCEEEEEeCC--------CeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCC
Confidence 011122223444555655321111222233 3799999986532 2222345667889999999999999986
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEE
Q psy14130 190 NVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAV 269 (494)
Q Consensus 190 ~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 269 (494)
.+|++++.|++|++||+++++.+..+. |...|.+++|+|+|++|++++.|+.|+|||+++++.+.++.+|.+.......
T Consensus 139 ~iLaSgS~DgtIrIWDl~tg~~~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v 217 (568)
T PTZ00420 139 YIMCSSGFDSFVNIWDIENEKRAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKNTKNI 217 (568)
T ss_pred eEEEEEeCCCeEEEEECCCCcEEEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEecccCCceeEEE
Confidence 677899999999999999998877776 6688999999999999999999999999999999999999999876334444
Q ss_pred EE----CCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCc
Q psy14130 270 FI----GDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERP 345 (494)
Q Consensus 270 ~~----~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~ 345 (494)
|. ++++.++++|+++..+++|+|||+++...++....++...++..+.|+++...+|++|++|+.|++|++..+.
T Consensus 218 ~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~~~~- 296 (568)
T PTZ00420 218 WIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNCRYYQHSLGS- 296 (568)
T ss_pred EeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEEECCCeEEEEEccCCc-
Confidence 43 7778899999765566799999999877777666666666777778888877777999999999999998874
Q ss_pred eEEecccccCCCCeeEEEEecCCceeeeccceeEEEEeeCCCCeEEEeEEEeeCC-CCCCCCCCCCCCCCCCcccCHhhh
Q psy14130 346 YIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHTTRNMCEPISMIVPRK-SDQFQDDLYPDTAAPVPALSAADW 424 (494)
Q Consensus 346 ~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pr~-~~~~~~~~~~~~~~~~~~~~~~~w 424 (494)
...+..+.+..++++++|.|++.+.+..+|+.|+|+++. ++.++||+|+|||| ++.||+||||++++.+|+++++||
T Consensus 297 -~~~l~~~~s~~p~~g~~f~Pkr~~dv~~cEi~R~~kl~~-~~~i~pisf~vPRk~~~~Fq~DlyP~t~~~~pa~ta~eW 374 (568)
T PTZ00420 297 -IRKVNEYKSCSPFRSFGFLPKQICDVYKCEIGRVYKNEN-NSSIRPISFYVPRKNPTKFQEDLYPPILMHDPERSSRNW 374 (568)
T ss_pred -EEeecccccCCCccceEEccccccCchhhhHhHHhhhcC-CCeEEEEEEEeccCCchhcccccCCCCCCCCcccCHHHH
Confidence 566778888899999999999999999999999999986 45799999999999 699999999999999999999999
Q ss_pred cCCCCCCCeEeccCC
Q psy14130 425 YKGVNRPPVLMSMRT 439 (494)
Q Consensus 425 ~~g~~~~~~~~sl~~ 439 (494)
++|.+.+|.++||++
T Consensus 375 ~~G~~~~p~~~sl~~ 389 (568)
T PTZ00420 375 IDGKDNKMKRINIKD 389 (568)
T ss_pred hCCCCCCCcEEeccc
Confidence 999999999999995
|
|
| >KOG1445|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-43 Score=329.00 Aligned_cols=356 Identities=33% Similarity=0.557 Sum_probs=315.2
Q ss_pred cCCCCceeecccCCccceeeceeccC--CccCCCeeeeCCceEEEEEeecCCcEEEEEEcCc------------------
Q psy14130 91 RSSKFRHVYGVHSKRDGCYDNVPITR--NAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHR------------------ 150 (494)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~------------------ 150 (494)
..+||+|+.+....+...+.+++-.. ...+.+-.+.|....|+...+ .+|.+.+...+.
T Consensus 552 ~iSKFRH~~Gt~ghks~hi~NLrnln~~~PgEsnGfcan~~rvAVPL~g-~gG~iai~el~~PGrLPDgv~p~l~Ngt~v 630 (1012)
T KOG1445|consen 552 QISKFRHVDGTQGHKSAHISNLRNLNTRLPGESNGFCANNKRVAVPLAG-SGGVIAIYELNEPGRLPDGVMPGLFNGTLV 630 (1012)
T ss_pred cchheeeccCccccchhhhhhhhcccccCCCccCceeeccceEEEEecC-CCceEEEEEcCCCCCCCcccccccccCcee
Confidence 45899999999988888887776443 334555555677888887754 466777777765
Q ss_pred ---------------------EEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC
Q psy14130 151 ---------------------VKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKG 209 (494)
Q Consensus 151 ---------------------v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~ 209 (494)
|+||.+..+++.+....+...+.+|...|+++.|||-...+|++++.|.+|++||+.++
T Consensus 631 tDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~ 710 (1012)
T KOG1445|consen 631 TDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANA 710 (1012)
T ss_pred eecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeehhhh
Confidence 99999999999988889999999999999999999988889999999999999999999
Q ss_pred eEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc-eEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCc
Q psy14130 210 EALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGL-VISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDR 288 (494)
Q Consensus 210 ~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~ 288 (494)
+....+.+|.+.|.+++|+|+|+.+++.++||+|++|+.++++ .+++-.+..+.+-.++.|..++..++++||.+++++
T Consensus 711 ~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~pv~Eg~gpvgtRgARi~wacdgr~viv~Gfdk~SeR 790 (1012)
T KOG1445|consen 711 KLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSREQPVYEGKGPVGTRGARILWACDGRIVIVVGFDKSSER 790 (1012)
T ss_pred hhhheeccCcCceeEEEECCCCcceeeeecCceEEEeCCCCCCCccccCCCCccCcceeEEEEecCcEEEEecccccchh
Confidence 9999999999999999999999999999999999999999886 677777766667789999999999999999999999
Q ss_pred eEEEEeCCCCC-CceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecC
Q psy14130 289 QVGLWDENDLN-TPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPK 367 (494)
Q Consensus 289 ~i~iwd~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 367 (494)
+|.+||..+.. .++....++....+.-..|++|.+.||++|.+|..|.+|++-...++.-.+..+.+...-.+++|.++
T Consensus 791 Qv~~Y~Aq~l~~~pl~t~~lDvaps~LvP~YD~Ds~~lfltGKGD~~v~~yEv~~esPy~lpl~~f~sp~~hqGl~fl~K 870 (1012)
T KOG1445|consen 791 QVQMYDAQTLDLRPLYTQVLDVAPSPLVPHYDYDSNVLFLTGKGDRFVNMYEVIYESPYLLPLAPFMSPVGHQGLAFLQK 870 (1012)
T ss_pred hhhhhhhhhccCCcceeeeecccCccccccccCCCceEEEecCCCceEEEEEecCCCceeeecccccCCCcccceeeecc
Confidence 99999988765 56667777888888889999999999999999999999999999999888999988899999999999
Q ss_pred CceeeeccceeEEEEeeCCCCeEEEeEEEeeCC-CCCCCCCCCCCCCCC-CcccCHhhhcCCCCCCCeEeccCC-CCccc
Q psy14130 368 RGCDVTQCEIFRFFKLHTTRNMCEPISMIVPRK-SDQFQDDLYPDTAAP-VPALSAADWYKGVNRPPVLMSMRT-GVNVC 444 (494)
Q Consensus 368 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pr~-~~~~~~~~~~~~~~~-~~~~~~~~w~~g~~~~~~~~sl~~-~~~~~ 444 (494)
..|.|++-+..+.|+|.. ..++|++|.+||. ++.||+|+||++... +|.++++.|+.|.+++|...||+| +|...
T Consensus 871 ~~CdV~~VEf~~c~RL~~--~~lEpitFrvPRikke~FQDDlFPdt~vtWepvls~e~W~~g~~~ap~~~SLkPp~ms~~ 948 (1012)
T KOG1445|consen 871 LKCDVMAVEFQVCWRLSD--KNLEPITFRVPRIKKEVFQDDLFPDTLVTWEPVLSGEKWMLGEQAAPVFRSLKPPSMSST 948 (1012)
T ss_pred cccceeeeehhhhhhhcc--CcccceeeecchhhhhhhccccCCCceeeeecccchhhhhhcccCCCceeecCCCCCccc
Confidence 999999999999999987 4799999999995 899999999999886 999999999999999999999997 55545
Q ss_pred cCCCC
Q psy14130 445 THKPK 449 (494)
Q Consensus 445 ~~~~~ 449 (494)
+..++
T Consensus 949 s~s~~ 953 (1012)
T KOG1445|consen 949 SNSAA 953 (1012)
T ss_pred ccchh
Confidence 43333
|
|
| >KOG1445|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-41 Score=316.61 Aligned_cols=352 Identities=31% Similarity=0.537 Sum_probs=312.9
Q ss_pred ccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCc-----------------
Q psy14130 88 RGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHR----------------- 150 (494)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~----------------- 150 (494)
+.++.+||++......+++.++.++.+.......+.++.+..++|+.++. .||.+.+.+...
T Consensus 3 wRF~aSKfknt~p~vPk~E~~i~di~vG~~~~~~n~I~aS~~flAFn~e~-~G~~lgvlPl~~~Gr~~r~i~~l~~H~d~ 81 (1012)
T KOG1445|consen 3 WRFAASKFKNTTPKVPKKEETIFDIPVGNLSCTNNGIHASADFLAFNIEG-EGGKLGVLPLTAKGRRTRDIGILAAHGDQ 81 (1012)
T ss_pred cccchhhcccCCCCCCchhhheeecccccccccCCCcccccceEEEeecC-CCceEEEEeccccCccccccceeecccce
Confidence 34578999999999999999999999999888888899999999999976 455677776543
Q ss_pred ----------------------EEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCC
Q psy14130 151 ----------------------VKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGK 208 (494)
Q Consensus 151 ----------------------v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~ 208 (494)
|+||.++.+ ....+..+...+-+....|.++.|||..+.+|++++ -|+++|||+.+
T Consensus 82 VtDl~FspF~D~LLAT~S~D~~VKiW~lp~g-~~q~LSape~~~g~~~~~vE~l~fHpTaDgil~s~a-~g~v~i~D~st 159 (1012)
T KOG1445|consen 82 VTDLGFSPFADELLATCSRDEPVKIWKLPRG-HSQKLSAPEIDVGGGNVIVECLRFHPTADGILASGA-HGSVYITDIST 159 (1012)
T ss_pred eeccCccccchhhhhcccCCCeeEEEecCCC-cccccCCcceeecCCceEEEEeecccCcCceEEecc-CceEEEEEccc
Confidence 999999944 333333455556666778999999999888888876 58999999999
Q ss_pred CeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCC-ceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCC
Q psy14130 209 GEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTG-LVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSD 287 (494)
Q Consensus 209 ~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d 287 (494)
++.+..+.+|.+.|.+..|+.||.+|+++++|+.|+|||.+.. +.++...+|.+.+-.++.|..+..+|+++||+...-
T Consensus 160 qk~~~el~~h~d~vQSa~WseDG~llatscKdkqirifDPRa~~~piQ~te~H~~~rdsRv~w~Gn~~rlisTGF~~~R~ 239 (1012)
T KOG1445|consen 160 QKTAVELSGHTDKVQSADWSEDGKLLATSCKDKQIRIFDPRASMEPIQTTEGHGGMRDSRVLWAGNWERLISTGFTTKRI 239 (1012)
T ss_pred CceeecccCCchhhhccccccCCceEeeecCCcceEEeCCccCCCccccccccccchhheeeeccchhhhhhcccchhhh
Confidence 9999999999999999999999999999999999999999864 588888999998899999999988999999988888
Q ss_pred ceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecC
Q psy14130 288 RQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPK 367 (494)
Q Consensus 288 ~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 367 (494)
++|++||.+....+.....++...++....|+||.++||++|.++..|..+++...+++.....++.......+.+..|+
T Consensus 240 reV~~~Dtr~f~~p~~tleld~stGvLiPl~DpDt~llfLaGKG~~~l~~lE~~d~qPyLs~v~~~tle~~~~GA~lvpk 319 (1012)
T KOG1445|consen 240 REVRAYDTRKFGAPVHTLELDSSTGVLIPLYDPDTRLLFLAGKGTNKLFMLEMQDRQPYLSHVFELTLEEQTLGATLVPK 319 (1012)
T ss_pred eeeeeeeccccCCcceeEEeecccceEeeeecCCCceEEEecCCcceEEEEEecCCCcchhhhhhhcchhhhccceecch
Confidence 99999999999999988899999999999999999999999999999999999999887666556655666789999999
Q ss_pred CceeeeccceeEEEEeeCCCCeEEEeEEEeeCCC-CCCCCCCCCCCCCCCcccCHhhhcCCCCCCCeEeccCCCCccc
Q psy14130 368 RGCDVTQCEIFRFFKLHTTRNMCEPISMIVPRKS-DQFQDDLYPDTAAPVPALSAADWYKGVNRPPVLMSMRTGVNVC 444 (494)
Q Consensus 368 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pr~~-~~~~~~~~~~~~~~~~~~~~~~w~~g~~~~~~~~sl~~~~~~~ 444 (494)
+.+-|++++..|++.|+. +.+.|+.++||||+ .+|++|+||++.+.+|++.+.||++|.|..+..+||.|..+.-
T Consensus 320 ral~VM~~EV~rvlQLt~--~~ivPi~y~VPRksyrdFH~DLfPeT~G~~p~~~ageWlnG~Nq~vqKvSl~Pa~r~h 395 (1012)
T KOG1445|consen 320 RALHVMDGEVDRVLQLTK--SSIVPIPYIVPRKSYRDFHSDLFPETRGAEPGCTAGEWLNGTNQVVQKVSLAPAQRSH 395 (1012)
T ss_pred hhhhhcchhhhhheeccc--CceeecccccchhhhhhhhhhhCccccCCccCcCccceecCccccccccccCchhccC
Confidence 999999999999999987 68999999999996 5999999999999999999999999999999999999976543
|
|
| >KOG0271|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-40 Score=288.62 Aligned_cols=322 Identities=16% Similarity=0.259 Sum_probs=238.9
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccc------cccCcccccccccceeecCCceEEEEEEEecC
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGC------YDNVPITRNAHDSHFCAANPKFVAVVTEVAGG 76 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (494)
-||.++|.|++|+| +|.+|+|||.|.++| +|+........ .-.+.+..++.+..+.+..-++.+.+|+...|
T Consensus 112 ~GH~e~Vl~~~fsp-~g~~l~tGsGD~TvR-~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg 189 (480)
T KOG0271|consen 112 AGHGEAVLSVQFSP-TGSRLVTGSGDTTVR-LWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTG 189 (480)
T ss_pred CCCCCcEEEEEecC-CCceEEecCCCceEE-eeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCC
Confidence 49999999999999 999999999999999 88865433211 01112233333333444444445555544333
Q ss_pred ceEEEEeccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEE-EEEcCcEEEEE
Q psy14130 77 GAFLVLPIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFL-VLPIHRVKLWY 155 (494)
Q Consensus 77 g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~v~iw~ 155 (494)
+.+.- .+.++..-+..++|.|-.+. .+.+.++ ...++.|+|||
T Consensus 190 ~~~g~-------------------------------~l~gH~K~It~Lawep~hl~-----p~~r~las~skDg~vrIWd 233 (480)
T KOG0271|consen 190 QQIGR-------------------------------ALRGHKKWITALAWEPLHLV-----PPCRRLASSSKDGSVRIWD 233 (480)
T ss_pred Ccccc-------------------------------cccCcccceeEEeecccccC-----CCccceecccCCCCEEEEE
Confidence 22210 01111122223333322211 1111111 11234799999
Q ss_pred cCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc-------
Q psy14130 156 IPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN------- 228 (494)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~------- 228 (494)
+..+ .++..+.||+.+|+|++|--+| +++|||.|++|++|+...|.+.+.+++|...|+.++.+
T Consensus 234 ~~~~-------~~~~~lsgHT~~VTCvrwGG~g--liySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRt 304 (480)
T KOG0271|consen 234 TKLG-------TCVRTLSGHTASVTCVRWGGEG--LIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRT 304 (480)
T ss_pred ccCc-------eEEEEeccCccceEEEEEcCCc--eEEecCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhc
Confidence 9988 7889999999999999999775 99999999999999999999999999999999999877
Q ss_pred ----CCCC-------------------------EEEEEeCCCeEEEEeCCCCc-eEEEeeecCCCCceEEEEECCCCeEE
Q psy14130 229 ----RDGS-------------------------RLVTTCKDKTVRVLDPRTGL-VISQGVCHPGTRSSKAVFIGDTGRIV 278 (494)
Q Consensus 229 ----~~~~-------------------------~l~s~~~d~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~ 278 (494)
|.++ .|++|+.|.++.+|+....+ ++..+.+|... ++.+.|+|+ ++++
T Consensus 305 gaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~l-Vn~V~fSPd-~r~I 382 (480)
T KOG0271|consen 305 GAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQAL-VNHVSFSPD-GRYI 382 (480)
T ss_pred cccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhh-eeeEEECCC-ccEE
Confidence 2233 49999999999999987665 88889999988 999999999 6777
Q ss_pred EEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCC
Q psy14130 279 TTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAP 358 (494)
Q Consensus 279 ~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~ 358 (494)
+++ +-|..|++||.++++....+. +|...|..++|+.|.++| ++|+.|.++++||+++.+.... +.. +...
T Consensus 383 ASa---SFDkSVkLW~g~tGk~lasfR--GHv~~VYqvawsaDsRLl-VS~SkDsTLKvw~V~tkKl~~D-LpG--h~DE 453 (480)
T KOG0271|consen 383 ASA---SFDKSVKLWDGRTGKFLASFR--GHVAAVYQVAWSADSRLL-VSGSKDSTLKVWDVRTKKLKQD-LPG--HADE 453 (480)
T ss_pred EEe---ecccceeeeeCCCcchhhhhh--hccceeEEEEeccCccEE-EEcCCCceEEEEEeeeeeeccc-CCC--CCce
Confidence 777 689999999999987654443 377899999999999998 9999999999999999875332 222 4688
Q ss_pred eeEEEEecCCceeeec--cceeEEEE
Q psy14130 359 QRGLGFMPKRGCDVTQ--CEIFRFFK 382 (494)
Q Consensus 359 v~~~~~~p~~~~~~~~--~~~~~~~~ 382 (494)
|.++.|+|||..++++ |..+|+|.
T Consensus 454 Vf~vDwspDG~rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 454 VFAVDWSPDGQRVASGGKDKVLRLWR 479 (480)
T ss_pred EEEEEecCCCceeecCCCceEEEeec
Confidence 9999999999999886 78888884
|
|
| >KOG0272|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-40 Score=292.20 Aligned_cols=215 Identities=23% Similarity=0.330 Sum_probs=194.2
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcC
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNR 229 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~ 229 (494)
++++|++.+. .++..+.+|..+|..++|||+| ++|+|++.|.+-++||++++..+...+||...|.+++|.+
T Consensus 242 tvklw~~~~e-------~~l~~l~gH~~RVs~VafHPsG-~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~ 313 (459)
T KOG0272|consen 242 TVKLWKLSQE-------TPLQDLEGHLARVSRVAFHPSG-KFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQP 313 (459)
T ss_pred ceeeeccCCC-------cchhhhhcchhhheeeeecCCC-ceeeecccccchhhcccccchhhHhhcccccccceeEecC
Confidence 7999999987 7888999999999999999999 7999999999999999999999888899999999999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecC
Q psy14130 230 DGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDS 309 (494)
Q Consensus 230 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 309 (494)
||++++||+.|..-||||+|+|+++..+.+|... |..+.|+|+ ++.+++| +.|++++|||++....... ...|
T Consensus 314 DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~-I~~V~fsPN-Gy~lATg---s~Dnt~kVWDLR~r~~ly~--ipAH 386 (459)
T KOG0272|consen 314 DGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIKE-ILSVAFSPN-GYHLATG---SSDNTCKVWDLRMRSELYT--IPAH 386 (459)
T ss_pred CCceeeccCccchhheeecccCcEEEEecccccc-eeeEeECCC-ceEEeec---CCCCcEEEeeeccccccee--cccc
Confidence 9999999999999999999999999999999998 999999999 7888998 8999999999997555322 2357
Q ss_pred CCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEE
Q psy14130 310 SSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFK 382 (494)
Q Consensus 310 ~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~ 382 (494)
.+-|..+.|+|+...+++|++.|+++++|..++..++..+ ..| .+.|.++..+|++.++++. |.++|+|.
T Consensus 387 ~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~~ksL-aGH--e~kV~s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 387 SNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSPLKSL-AGH--EGKVISLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred cchhhheEecccCCeEEEEcccCcceeeecCCCcccchhh-cCC--ccceEEEEeccCCceEEEeccCceeeecc
Confidence 7889999999966666699999999999999999885444 333 6789999999999988886 99999995
|
|
| >KOG0286|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-38 Score=267.19 Aligned_cols=289 Identities=19% Similarity=0.256 Sum_probs=231.8
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 82 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~ 82 (494)
|||.+.|+++.|++ |.++|+|+|.||.+. +|+..+..... .+
T Consensus 52 kGH~~Ki~~~~ws~-Dsr~ivSaSqDGklI-vWDs~TtnK~h------------------------------------ai 93 (343)
T KOG0286|consen 52 KGHLNKIYAMDWST-DSRRIVSASQDGKLI-VWDSFTTNKVH------------------------------------AI 93 (343)
T ss_pred cccccceeeeEecC-CcCeEEeeccCCeEE-EEEccccccee------------------------------------EE
Confidence 89999999999999 999999999999997 88743221100 01
Q ss_pred eccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCC
Q psy14130 83 PIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLS 162 (494)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~ 162 (494)
|+.. .=+-.|++.|....++..+-+ +...||++.+....
T Consensus 94 pl~s--------------------------------~WVMtCA~sPSg~~VAcGGLd---------N~Csiy~ls~~d~~ 132 (343)
T KOG0286|consen 94 PLPS--------------------------------SWVMTCAYSPSGNFVACGGLD---------NKCSIYPLSTRDAE 132 (343)
T ss_pred ecCc--------------------------------eeEEEEEECCCCCeEEecCcC---------ceeEEEeccccccc
Confidence 1100 011224444443333332222 35778998854222
Q ss_pred CCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcC-CCCEEEEEeCCC
Q psy14130 163 GNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNR-DGSRLVTTCKDK 241 (494)
Q Consensus 163 ~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~-~~~~l~s~~~d~ 241 (494)
... ...+.+.+|++.+.|+.|-+++ .|+|+|.|.+..+||+++++.+..|.+|.+.|.++.++| +++.+++|+-|+
T Consensus 133 g~~-~v~r~l~gHtgylScC~f~dD~--~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~ 209 (343)
T KOG0286|consen 133 GNV-RVSRELAGHTGYLSCCRFLDDN--HILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDK 209 (343)
T ss_pred ccc-eeeeeecCccceeEEEEEcCCC--ceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEeccccc
Confidence 111 4456799999999999999974 799999999999999999999999999999999999999 999999999999
Q ss_pred eEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCC
Q psy14130 242 TVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHD 321 (494)
Q Consensus 242 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 321 (494)
..++||+|.+.++++|.+|... ++.+.|.|+ +.-+++| ++|+++++||+|...+...+....-..+|++++||..
T Consensus 210 ~aklWD~R~~~c~qtF~ghesD-INsv~ffP~-G~afatG---SDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~S 284 (343)
T KOG0286|consen 210 SAKLWDVRSGQCVQTFEGHESD-INSVRFFPS-GDAFATG---SDDATCRLYDLRADQELAVYSHDSIICGITSVAFSKS 284 (343)
T ss_pred ceeeeeccCcceeEeecccccc-cceEEEccC-CCeeeec---CCCceeEEEeecCCcEEeeeccCcccCCceeEEEccc
Confidence 9999999999999999999998 999999999 6778888 8999999999998766555544344578999999999
Q ss_pred CCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEE
Q psy14130 322 TRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFK 382 (494)
Q Consensus 322 ~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~ 382 (494)
|++| .+|..|.++.+||.-.++.... +.. |.+.|.++..+|||..++++ |..+|||.
T Consensus 285 GRlL-fagy~d~~c~vWDtlk~e~vg~-L~G--HeNRvScl~~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 285 GRLL-FAGYDDFTCNVWDTLKGERVGV-LAG--HENRVSCLGVSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred ccEE-EeeecCCceeEeeccccceEEE-eec--cCCeeEEEEECCCCcEEEecchhHheeecC
Confidence 9999 7788999999999998876433 333 47889999999999999997 99999993
|
|
| >KOG0279|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-35 Score=246.67 Aligned_cols=218 Identities=18% Similarity=0.286 Sum_probs=184.2
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCC--CCceEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCH--PDVINCLS 226 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h--~~~v~~l~ 226 (494)
+.+++||+.++ ++.+.|.||...|.+++|+++. ..++|||.|.+|++|++.. .+..++..+ .+.|.++.
T Consensus 85 ~~lrlWDl~~g-------~~t~~f~GH~~dVlsva~s~dn-~qivSGSrDkTiklwnt~g-~ck~t~~~~~~~~WVscvr 155 (315)
T KOG0279|consen 85 GTLRLWDLATG-------ESTRRFVGHTKDVLSVAFSTDN-RQIVSGSRDKTIKLWNTLG-VCKYTIHEDSHREWVSCVR 155 (315)
T ss_pred ceEEEEEecCC-------cEEEEEEecCCceEEEEecCCC-ceeecCCCcceeeeeeecc-cEEEEEecCCCcCcEEEEE
Confidence 37999999999 7888999999999999999998 7999999999999999864 455555433 78999999
Q ss_pred EcCC--CCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeE
Q psy14130 227 FNRD--GSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLAL 304 (494)
Q Consensus 227 ~~~~--~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~ 304 (494)
|+|+ ..+|++++.|++|++||+++.+....+.+|++. ++.+.++|| +.+.++| +.||.+.+||++..+. .
T Consensus 156 fsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~-v~t~~vSpD-GslcasG---gkdg~~~LwdL~~~k~---l 227 (315)
T KOG0279|consen 156 FSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGY-VNTVTVSPD-GSLCASG---GKDGEAMLWDLNEGKN---L 227 (315)
T ss_pred EcCCCCCcEEEEccCCceEEEEccCCcchhhcccccccc-EEEEEECCC-CCEEecC---CCCceEEEEEccCCce---e
Confidence 9997 779999999999999999999999999999998 999999999 6777888 7999999999998666 5
Q ss_pred eeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccC------CCCeeEEEEecCCceeeec--cc
Q psy14130 305 ETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLS------GAPQRGLGFMPKRGCDVTQ--CE 376 (494)
Q Consensus 305 ~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~------~~~v~~~~~~p~~~~~~~~--~~ 376 (494)
..+++...|.+++|+|+.-.| +.+ .+..|+|||+.++..+..+...... .....+++|++||..+.++ |+
T Consensus 228 ysl~a~~~v~sl~fspnrywL-~~a-t~~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~g~td~ 305 (315)
T KOG0279|consen 228 YSLEAFDIVNSLCFSPNRYWL-CAA-TATSIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFAGYTDN 305 (315)
T ss_pred EeccCCCeEeeEEecCCceeE-eec-cCCceEEEeccchhhhhhccccccccccccCCcEEEEEEEcCCCcEEEeeecCC
Confidence 556788899999999998777 444 5667999999998765444333222 2235778999999988886 99
Q ss_pred eeEEEEeeC
Q psy14130 377 IFRFFKLHT 385 (494)
Q Consensus 377 ~~~~~~l~~ 385 (494)
.+|+|.+..
T Consensus 306 ~irv~qv~~ 314 (315)
T KOG0279|consen 306 VIRVWQVAK 314 (315)
T ss_pred cEEEEEeec
Confidence 999998764
|
|
| >KOG0272|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-36 Score=267.02 Aligned_cols=176 Identities=21% Similarity=0.349 Sum_probs=162.3
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
.+-++||+.++ ..+...+||...|.+++|+|+| .+++||+.|..-+|||+++|.++..+.+|...|.+|+|+
T Consensus 283 ~tWRlWD~~tk-------~ElL~QEGHs~~v~~iaf~~DG-SL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fs 354 (459)
T KOG0272|consen 283 STWRLWDLETK-------SELLLQEGHSKGVFSIAFQPDG-SLAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFS 354 (459)
T ss_pred cchhhcccccc-------hhhHhhcccccccceeEecCCC-ceeeccCccchhheeecccCcEEEEecccccceeeEeEC
Confidence 36899999998 6667788999999999999999 799999999999999999999999999999999999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD 308 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~ 308 (494)
|+|-.||||+.|++++|||++..+.+.++.+|.+. |+.+.|.|..+.+++++ +.|++++||..++......+. +
T Consensus 355 PNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nl-VS~Vk~~p~~g~fL~Ta---syD~t~kiWs~~~~~~~ksLa--G 428 (459)
T KOG0272|consen 355 PNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNL-VSQVKYSPQEGYFLVTA---SYDNTVKIWSTRTWSPLKSLA--G 428 (459)
T ss_pred CCceEEeecCCCCcEEEeeecccccceecccccch-hhheEecccCCeEEEEc---ccCcceeeecCCCcccchhhc--C
Confidence 99999999999999999999999999999999998 99999999878888888 799999999988876544443 5
Q ss_pred CCCceEEeEEeCCCCEEEEEEeCCCcEEEEE
Q psy14130 309 SSSGVLFPYYDHDTRILFLAGKGDGNIRYYE 339 (494)
Q Consensus 309 ~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd 339 (494)
|...|.++.+++|+..+ ++++.|.+|++|.
T Consensus 429 He~kV~s~Dis~d~~~i-~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 429 HEGKVISLDISPDSQAI-ATSSFDRTIKLWR 458 (459)
T ss_pred CccceEEEEeccCCceE-EEeccCceeeecc
Confidence 77899999999999999 9999999999995
|
|
| >KOG0271|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-35 Score=258.64 Aligned_cols=277 Identities=20% Similarity=0.321 Sum_probs=208.8
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccc--ccc----------CcccccccccceeecCCceEEEE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGC--YDN----------VPITRNAHDSHFCAANPKFVAVV 70 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~--~~~----------~~~~~~~~~~~~~~~~~~~~~~~ 70 (494)
|||..-|.||+|+| ||+.||||+.||+|+ +|+-...+..- ... .++...+.-..+.+.+.++.+.+
T Consensus 154 KgH~~WVlcvawsP-Dgk~iASG~~dg~I~-lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrI 231 (480)
T KOG0271|consen 154 KGHKNWVLCVAWSP-DGKKIASGSKDGSIR-LWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRI 231 (480)
T ss_pred cCCccEEEEEEECC-CcchhhccccCCeEE-EecCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEE
Confidence 89999999999999 999999999999999 77743322100 000 01111111223334455566666
Q ss_pred EEEecCceEEEEeccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEE-EEEcC
Q psy14130 71 TEVAGGGAFLVLPIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFL-VLPIH 149 (494)
Q Consensus 71 ~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~ 149 (494)
|+...+..+.. +..++..+..+.|. +.|.++ ...+.
T Consensus 232 Wd~~~~~~~~~--------------------------------lsgHT~~VTCvrwG-----------G~gliySgS~Dr 268 (480)
T KOG0271|consen 232 WDTKLGTCVRT--------------------------------LSGHTASVTCVRWG-----------GEGLIYSGSQDR 268 (480)
T ss_pred EEccCceEEEE--------------------------------eccCccceEEEEEc-----------CCceEEecCCCc
Confidence 65543322221 12222333444442 222222 22245
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEc-----------CCCC------------------------CEEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWH-----------PTAE------------------------NVVAS 194 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~-----------p~~~------------------------~~l~s 194 (494)
+|++|+...+ ....+++||...|+.++.+ |.+. ..|++
T Consensus 269 tIkvw~a~dG-------~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVS 341 (480)
T KOG0271|consen 269 TIKVWRALDG-------KLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVS 341 (480)
T ss_pred eEEEEEccch-------hHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEE
Confidence 7999999998 6778999999999999876 3332 25999
Q ss_pred EeCCCeEEEEECCCC-eEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECC
Q psy14130 195 AGFDYLIILWDVGKG-EALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGD 273 (494)
Q Consensus 195 ~s~d~~v~iwd~~~~-~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (494)
|+.|+++.+|+.... +++..+.+|...|+.+.|+||++++|++|-|+.|++||.++|+.+.++.+|-.. +..++|+.|
T Consensus 342 gsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRGHv~~-VYqvawsaD 420 (480)
T KOG0271|consen 342 GSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASFRGHVAA-VYQVAWSAD 420 (480)
T ss_pred ecCCceEEEecccccccchhhhhchhhheeeEEECCCccEEEEeecccceeeeeCCCcchhhhhhhccce-eEEEEeccC
Confidence 999999999998654 588889999999999999999999999999999999999999999999999998 999999998
Q ss_pred CCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEE
Q psy14130 274 TGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYE 339 (494)
Q Consensus 274 ~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd 339 (494)
.+|+++| +.|.++++||+++.+.. ....+|...|.++.|+|||+.+ ++|+.|..+++|.
T Consensus 421 -sRLlVS~---SkDsTLKvw~V~tkKl~--~DLpGh~DEVf~vDwspDG~rV-~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 421 -SRLLVSG---SKDSTLKVWDVRTKKLK--QDLPGHADEVFAVDWSPDGQRV-ASGGKDKVLRLWR 479 (480)
T ss_pred -ccEEEEc---CCCceEEEEEeeeeeec--ccCCCCCceEEEEEecCCCcee-ecCCCceEEEeec
Confidence 7899999 89999999999974432 2223477899999999999999 9999999999994
|
|
| >KOG0291|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-32 Score=256.13 Aligned_cols=219 Identities=16% Similarity=0.261 Sum_probs=187.9
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+++-||+.... ..+...+||...+++++++|+| +++|||+.||.|+|||.+.+-|..+|..|+..|+.++|+
T Consensus 330 gQLlVweWqsE-------sYVlKQQgH~~~i~~l~YSpDg-q~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~ 401 (893)
T KOG0291|consen 330 GQLLVWEWQSE-------SYVLKQQGHSDRITSLAYSPDG-QLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFT 401 (893)
T ss_pred ceEEEEEeecc-------ceeeeccccccceeeEEECCCC-cEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEE
Confidence 36889998877 6667788999999999999999 799999999999999999999999999999999999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCC-ceEEEEeCCCCCCceeEeee
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSD-RQVGLWDENDLNTPLALETV 307 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d-~~i~iwd~~~~~~~~~~~~~ 307 (494)
..|+.++++|.||+||.||+...+..+++......+..+++..|. +.++++| +.| -.|.+|++.+++..-.+ .
T Consensus 402 ~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~s-GelV~AG---~~d~F~IfvWS~qTGqllDiL--s 475 (893)
T KOG0291|consen 402 ARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPS-GELVCAG---AQDSFEIFVWSVQTGQLLDIL--S 475 (893)
T ss_pred ecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEcCC-CCEEEee---ccceEEEEEEEeecCeeeehh--c
Confidence 999999999999999999999999999998887776777777777 6677776 344 47999999987654333 2
Q ss_pred cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 308 DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 308 ~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
+|.++|.+++|+|++..| ++|+.|.+|++||+-........+ ....-+.+++|.|+|..++.+ |+.+.+|+...
T Consensus 476 GHEgPVs~l~f~~~~~~L-aS~SWDkTVRiW~if~s~~~vEtl---~i~sdvl~vsfrPdG~elaVaTldgqItf~d~~~ 551 (893)
T KOG0291|consen 476 GHEGPVSGLSFSPDGSLL-ASGSWDKTVRIWDIFSSSGTVETL---EIRSDVLAVSFRPDGKELAVATLDGQITFFDIKE 551 (893)
T ss_pred CCCCcceeeEEccccCeE-EeccccceEEEEEeeccCceeeeE---eeccceeEEEEcCCCCeEEEEEecceEEEEEhhh
Confidence 577899999999999988 999999999999998764333332 234569999999999877664 99999999877
|
|
| >KOG0279|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-33 Score=234.73 Aligned_cols=223 Identities=18% Similarity=0.261 Sum_probs=188.3
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
.++.+|++... ...+..+++.++||...|..+..+++| ++.++++.|+++++||+.+++..+.|.+|...|.+++|+
T Consensus 38 k~ii~W~L~~d--d~~~G~~~r~~~GHsH~v~dv~~s~dg-~~alS~swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s 114 (315)
T KOG0279|consen 38 KTIIVWKLTSD--DIKYGVPVRRLTGHSHFVSDVVLSSDG-NFALSASWDGTLRLWDLATGESTRRFVGHTKDVLSVAFS 114 (315)
T ss_pred eEEEEEEeccC--ccccCceeeeeeccceEecceEEccCC-ceEEeccccceEEEEEecCCcEEEEEEecCCceEEEEec
Confidence 36888998766 233446788999999999999999999 799999999999999999999999999999999999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceEEEeeecC-CCCceEEEEECCC-CeEEEEEecCCCCceEEEEeCCCCCCceeEee
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHP-GTRSSKAVFIGDT-GRIVTTGFSRHSDRQVGLWDENDLNTPLALET 306 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~ 306 (494)
+|.+.|+||+.|++|++|++. +.+..++..+. ...+.++.|+|+. +-+++.+ +.|++|++||+++.+... ..
T Consensus 115 ~dn~qivSGSrDkTiklwnt~-g~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~---s~DktvKvWnl~~~~l~~--~~ 188 (315)
T KOG0279|consen 115 TDNRQIVSGSRDKTIKLWNTL-GVCKYTIHEDSHREWVSCVRFSPNESNPIIVSA---SWDKTVKVWNLRNCQLRT--TF 188 (315)
T ss_pred CCCceeecCCCcceeeeeeec-ccEEEEEecCCCcCcEEEEEEcCCCCCcEEEEc---cCCceEEEEccCCcchhh--cc
Confidence 999999999999999999987 45555555443 3449999999984 3445555 599999999999865432 33
Q ss_pred ecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec-cceeEEEEeeC
Q psy14130 307 VDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ-CEIFRFFKLHT 385 (494)
Q Consensus 307 ~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~-~~~~~~~~l~~ 385 (494)
+.|...++.+.+||||..+ ++|+.||.+.+||++.++.+ ..+.+..+|.+++|+|++..++.+ +..++||++..
T Consensus 189 ~gh~~~v~t~~vSpDGslc-asGgkdg~~~LwdL~~~k~l----ysl~a~~~v~sl~fspnrywL~~at~~sIkIwdl~~ 263 (315)
T KOG0279|consen 189 IGHSGYVNTVTVSPDGSLC-ASGGKDGEAMLWDLNEGKNL----YSLEAFDIVNSLCFSPNRYWLCAATATSIKIWDLES 263 (315)
T ss_pred ccccccEEEEEECCCCCEE-ecCCCCceEEEEEccCCcee----EeccCCCeEeeEEecCCceeEeeccCCceEEEeccc
Confidence 4577889999999999998 99999999999999999873 333456889999999999877775 77899999988
|
|
| >KOG0263|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=271.13 Aligned_cols=206 Identities=21% Similarity=0.248 Sum_probs=188.0
Q ss_pred ceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEe
Q psy14130 168 WIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLD 247 (494)
Q Consensus 168 ~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd 247 (494)
...++.||+++|..+.|+|+. ++|+++|.|+++|+|.+.+..++..+++|..+|+.+.|+|-|-++||++.|++.++|.
T Consensus 443 ~~~~L~GH~GPVyg~sFsPd~-rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs 521 (707)
T KOG0263|consen 443 TSRTLYGHSGPVYGCSFSPDR-RFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWS 521 (707)
T ss_pred eeEEeecCCCceeeeeecccc-cceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeee
Confidence 345688999999999999997 7999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEE
Q psy14130 248 PRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFL 327 (494)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 327 (494)
.....+++.+.+|.+. +.++.|+|+ ..++++| +.|++||+||+.++.....+ .+|..+|.+++|||+|++| +
T Consensus 522 ~d~~~PlRifaghlsD-V~cv~FHPN-s~Y~aTG---SsD~tVRlWDv~~G~~VRiF--~GH~~~V~al~~Sp~Gr~L-a 593 (707)
T KOG0263|consen 522 TDHNKPLRIFAGHLSD-VDCVSFHPN-SNYVATG---SSDRTVRLWDVSTGNSVRIF--TGHKGPVTALAFSPCGRYL-A 593 (707)
T ss_pred cccCCchhhhcccccc-cceEEECCc-ccccccC---CCCceEEEEEcCCCcEEEEe--cCCCCceEEEEEcCCCceE-e
Confidence 9999999999999988 899999998 7788888 89999999999987664433 3588999999999999999 9
Q ss_pred EEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 328 AGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 328 ~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
+|+.||.|.+||+.+++++..+..+ .+.|.++.|+.+|..+|++ |..+++|++..
T Consensus 594 Sg~ed~~I~iWDl~~~~~v~~l~~H---t~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~ 650 (707)
T KOG0263|consen 594 SGDEDGLIKIWDLANGSLVKQLKGH---TGTIYSLSFSRDGNVLASGGADNSVRLWDLTK 650 (707)
T ss_pred ecccCCcEEEEEcCCCcchhhhhcc---cCceeEEEEecCCCEEEecCCCCeEEEEEchh
Confidence 9999999999999999886555433 6789999999999999985 99999999887
|
|
| >KOG0315|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-32 Score=227.20 Aligned_cols=232 Identities=13% Similarity=0.166 Sum_probs=187.6
Q ss_pred EEEEEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCc
Q psy14130 142 AFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDV 221 (494)
Q Consensus 142 ~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~ 221 (494)
.+++.+...|++||+.++.. .++.++.+|+..|+++.|..+| +.++|||+||+++|||++...+.+.++ |..+
T Consensus 54 ~LAaa~~qhvRlyD~~S~np-----~Pv~t~e~h~kNVtaVgF~~dg-rWMyTgseDgt~kIWdlR~~~~qR~~~-~~sp 126 (311)
T KOG0315|consen 54 DLAAAGNQHVRLYDLNSNNP-----NPVATFEGHTKNVTAVGFQCDG-RWMYTGSEDGTVKIWDLRSLSCQRNYQ-HNSP 126 (311)
T ss_pred hhhhccCCeeEEEEccCCCC-----CceeEEeccCCceEEEEEeecC-eEEEecCCCceEEEEeccCcccchhcc-CCCC
Confidence 33444445799999998854 5889999999999999999999 799999999999999999876666666 8899
Q ss_pred eEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCc
Q psy14130 222 INCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTP 301 (494)
Q Consensus 222 v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~ 301 (494)
|+++..+|+...|++|..+|.|++||+++..+..++.......+.++...|++ ..++++ ...|.+++|++-+....
T Consensus 127 Vn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dg-sml~a~---nnkG~cyvW~l~~~~~~ 202 (311)
T KOG0315|consen 127 VNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTVMPDG-SMLAAA---NNKGNCYVWRLLNHQTA 202 (311)
T ss_pred cceEEecCCcceEEeecCCCcEEEEEccCCccccccCCCCCcceeeEEEcCCC-cEEEEe---cCCccEEEEEccCCCcc
Confidence 99999999999999999999999999999887777766666668888899985 555555 58999999998653321
Q ss_pred eeEe----eecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--c
Q psy14130 302 LALE----TVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--C 375 (494)
Q Consensus 302 ~~~~----~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~ 375 (494)
..+. ...|...++.+.+|||+++| ++++.|.+++||+.++--.+...+.. +..-++..+||.|+.+++++ |
T Consensus 203 s~l~P~~k~~ah~~~il~C~lSPd~k~l-at~ssdktv~iwn~~~~~kle~~l~g--h~rWvWdc~FS~dg~YlvTassd 279 (311)
T KOG0315|consen 203 SELEPVHKFQAHNGHILRCLLSPDVKYL-ATCSSDKTVKIWNTDDFFKLELVLTG--HQRWVWDCAFSADGEYLVTASSD 279 (311)
T ss_pred ccceEhhheecccceEEEEEECCCCcEE-EeecCCceEEEEecCCceeeEEEeec--CCceEEeeeeccCccEEEecCCC
Confidence 1111 12356778999999999999 99999999999999876111122222 23579999999999999986 8
Q ss_pred ceeEEEEeeCCC
Q psy14130 376 EIFRFFKLHTTR 387 (494)
Q Consensus 376 ~~~~~~~l~~~~ 387 (494)
...|+|++..++
T Consensus 280 ~~~rlW~~~~~k 291 (311)
T KOG0315|consen 280 HTARLWDLSAGK 291 (311)
T ss_pred CceeecccccCc
Confidence 999999998843
|
|
| >KOG0284|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=251.47 Aligned_cols=218 Identities=17% Similarity=0.250 Sum_probs=187.2
Q ss_pred cEEEEEcCCCCCCCCcccceEecccc-cccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGH-KRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h-~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
.|++|+..-. -++..++| ...|++++|+|+. ..+++||.||+|+|||....++...+.+|.-.|.+++|+
T Consensus 161 ~iKyWqpnmn--------nVk~~~ahh~eaIRdlafSpnD-skF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWH 231 (464)
T KOG0284|consen 161 MIKYWQPNMN--------NVKIIQAHHAEAIRDLAFSPND-SKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWH 231 (464)
T ss_pred eEEecccchh--------hhHHhhHhhhhhhheeccCCCC-ceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccC
Confidence 6999997654 22344445 4999999999986 799999999999999999998888999999999999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD 308 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~ 308 (494)
|...+|+++++|..|++||+++++++.++..|... +..+.|.+++ .+|+++ +.|..++++|+|+.+....+. .
T Consensus 232 P~kgLiasgskDnlVKlWDprSg~cl~tlh~HKnt-Vl~~~f~~n~-N~Llt~---skD~~~kv~DiR~mkEl~~~r--~ 304 (464)
T KOG0284|consen 232 PTKGLIASGSKDNLVKLWDPRSGSCLATLHGHKNT-VLAVKFNPNG-NWLLTG---SKDQSCKVFDIRTMKELFTYR--G 304 (464)
T ss_pred CccceeEEccCCceeEeecCCCcchhhhhhhccce-EEEEEEcCCC-CeeEEc---cCCceEEEEehhHhHHHHHhh--c
Confidence 99999999999999999999999999999999998 9999999997 555555 599999999999766544433 3
Q ss_pred CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 309 SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 309 ~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
|...++++.|+|-..-||++|+.||.|..|.+...+++..+ .+.+...|++++|+|-|-+++++ |.++|+|.-..
T Consensus 305 Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~~p~~~i--~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r~r 381 (464)
T KOG0284|consen 305 HKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLEEPLGEI--PPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTRNR 381 (464)
T ss_pred chhhheeeccccccccceeeccCCCceEEEeccccccccCC--CcccccceeeeeccccceeEeecCCCcceeeeccCC
Confidence 77889999999999888899999999999999976664333 34567889999999999999886 89999997544
|
|
| >KOG0285|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-32 Score=238.33 Aligned_cols=286 Identities=17% Similarity=0.251 Sum_probs=222.1
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 82 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~ 82 (494)
+||.+-|.||++.| ...+|+||+.|++++ ||++.+++..... ..+-
T Consensus 148 ~gHlgWVr~vavdP-~n~wf~tgs~Drtik-IwDlatg~Lkltl------tGhi-------------------------- 193 (460)
T KOG0285|consen 148 SGHLGWVRSVAVDP-GNEWFATGSADRTIK-IWDLATGQLKLTL------TGHI-------------------------- 193 (460)
T ss_pred hhccceEEEEeeCC-CceeEEecCCCceeE-EEEcccCeEEEee------cchh--------------------------
Confidence 69999999999999 789999999999999 9987655421100 0000
Q ss_pred eccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCC
Q psy14130 83 PIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLS 162 (494)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~ 162 (494)
...+.+.+ ..-.|..+ ++..+ ++|+.||+...
T Consensus 194 ------------------------~~vr~vav---------S~rHpYlF----s~ged--------k~VKCwDLe~n--- 225 (460)
T KOG0285|consen 194 ------------------------ETVRGVAV---------SKRHPYLF----SAGED--------KQVKCWDLEYN--- 225 (460)
T ss_pred ------------------------heeeeeee---------cccCceEE----EecCC--------CeeEEEechhh---
Confidence 00011111 11112111 12233 37999999998
Q ss_pred CCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCe
Q psy14130 163 GNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKT 242 (494)
Q Consensus 163 ~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~ 242 (494)
+.++.+.||-..|.|++.+|.- ..|+||+.|.++++||+++...+..+.+|..+|.++.+.|-...+++||.|++
T Consensus 226 ----kvIR~YhGHlS~V~~L~lhPTl-dvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~t 300 (460)
T KOG0285|consen 226 ----KVIRHYHGHLSGVYCLDLHPTL-DVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVITGSHDST 300 (460)
T ss_pred ----hhHHHhccccceeEEEeccccc-eeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecCCCceEEecCCce
Confidence 7778899999999999999997 69999999999999999999999999999999999999998889999999999
Q ss_pred EEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCC
Q psy14130 243 VRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDT 322 (494)
Q Consensus 243 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 322 (494)
|++||++.|+...++..|... +.+++.+|. ..+++++ .-..|+-|++..+..... ...+..-++++....|+
T Consensus 301 vrlWDl~agkt~~tlt~hkks-vral~lhP~-e~~fASa----s~dnik~w~~p~g~f~~n--lsgh~~iintl~~nsD~ 372 (460)
T KOG0285|consen 301 VRLWDLRAGKTMITLTHHKKS-VRALCLHPK-ENLFASA----SPDNIKQWKLPEGEFLQN--LSGHNAIINTLSVNSDG 372 (460)
T ss_pred EEEeeeccCceeEeeecccce-eeEEecCCc-hhhhhcc----CCccceeccCCccchhhc--cccccceeeeeeeccCc
Confidence 999999999999999989887 888888887 6777777 455799999887554332 22345567777777666
Q ss_pred CEEEEEEeCCCcEEEEEeeCCCceEEecc-----cccCCCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 323 RILFLAGKGDGNIRYYELTNERPYIHFLN-----QSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 323 ~~l~~~g~~dg~i~~wd~~~~~~~~~~~~-----~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
++++|+..|.|.+||.+++..++.... .......|.+.+|...+..++++ |.+|++|+-..
T Consensus 373 --v~~~G~dng~~~fwdwksg~nyQ~~~t~vqpGSl~sEagI~as~fDktg~rlit~eadKtIk~~keDe 440 (460)
T KOG0285|consen 373 --VLVSGGDNGSIMFWDWKSGHNYQRGQTIVQPGSLESEAGIFASCFDKTGSRLITGEADKTIKMYKEDE 440 (460)
T ss_pred --eEEEcCCceEEEEEecCcCcccccccccccCCccccccceeEEeecccCceEEeccCCcceEEEeccc
Confidence 337999999999999999987655422 23345678889999999888885 99999998654
|
|
| >KOG0645|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-31 Score=221.75 Aligned_cols=288 Identities=19% Similarity=0.327 Sum_probs=213.1
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 82 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~ 82 (494)
.||.+.|..++|||..|..|||||.|+.|| +|....... |.+
T Consensus 11 ~gh~~r~W~~awhp~~g~ilAscg~Dk~vr-iw~~~~~~s----------------------------~~c--------- 52 (312)
T KOG0645|consen 11 SGHKDRVWSVAWHPGKGVILASCGTDKAVR-IWSTSSGDS----------------------------WTC--------- 52 (312)
T ss_pred cCCCCcEEEEEeccCCceEEEeecCCceEE-EEecCCCCc----------------------------EEE---------
Confidence 699999999999993388999999999999 886532110 000
Q ss_pred eccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCC
Q psy14130 83 PIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLS 162 (494)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~ 162 (494)
+++.. ..+...+.-++++|....++..+ -+ .++.||.-..+..
T Consensus 53 -------------k~vld--------------~~hkrsVRsvAwsp~g~~La~aS-FD--------~t~~Iw~k~~~ef- 95 (312)
T KOG0645|consen 53 -------------KTVLD--------------DGHKRSVRSVAWSPHGRYLASAS-FD--------ATVVIWKKEDGEF- 95 (312)
T ss_pred -------------EEecc--------------ccchheeeeeeecCCCcEEEEee-cc--------ceEEEeecCCCce-
Confidence 00000 00112233345544333222222 11 2689998776644
Q ss_pred CCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC---eEEEEecCCCCceEEEEEcCCCCEEEEEeC
Q psy14130 163 GNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKG---EALTVIDCHPDVINCLSFNRDGSRLVTTCK 239 (494)
Q Consensus 163 ~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~---~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~ 239 (494)
+++.+++||...|.|++|+++| ++||+|+.|..|-||.+..+ ++...+++|...|-.+.|+|...+|+|+|.
T Consensus 96 ----ecv~~lEGHEnEVK~Vaws~sG-~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SY 170 (312)
T KOG0645|consen 96 ----ECVATLEGHENEVKCVAWSASG-NYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSY 170 (312)
T ss_pred ----eEEeeeeccccceeEEEEcCCC-CEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcceeEEecc
Confidence 7788999999999999999999 79999999999999999754 467889999999999999999999999999
Q ss_pred CCeEEEEeCCC---CceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEe
Q psy14130 240 DKTVRVLDPRT---GLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFP 316 (494)
Q Consensus 240 d~~v~iwd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~ 316 (494)
|.+|++|+-.. ..+++++.+|.+. +.++.|.+.+.+++++. .|++++||-.... ....+...+..+
T Consensus 171 DnTIk~~~~~~dddW~c~~tl~g~~~T-VW~~~F~~~G~rl~s~s----dD~tv~Iw~~~~~------~~~~~sr~~Y~v 239 (312)
T KOG0645|consen 171 DNTIKVYRDEDDDDWECVQTLDGHENT-VWSLAFDNIGSRLVSCS----DDGTVSIWRLYTD------LSGMHSRALYDV 239 (312)
T ss_pred CCeEEEEeecCCCCeeEEEEecCccce-EEEEEecCCCceEEEec----CCcceEeeeeccC------cchhcccceEee
Confidence 99999998762 3489999999987 99999999976776665 9999999986631 112255678888
Q ss_pred EEeCCCCEEEEEEeCCCcEEEEEeeCC--CceEEecc--cccCCCCeeEEEEecC-Cceeeec--cceeEEEEee
Q psy14130 317 YYDHDTRILFLAGKGDGNIRYYELTNE--RPYIHFLN--QSLSGAPQRGLGFMPK-RGCDVTQ--CEIFRFFKLH 384 (494)
Q Consensus 317 ~~~~~~~~l~~~g~~dg~i~~wd~~~~--~~~~~~~~--~~~~~~~v~~~~~~p~-~~~~~~~--~~~~~~~~l~ 384 (494)
.|. ...| +++++|+.|++|.-... .+....+. ...|+..|.++.|.|+ ...++++ |+++++|.+.
T Consensus 240 ~W~--~~~I-aS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 240 PWD--NGVI-ASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWELE 311 (312)
T ss_pred eec--ccce-EeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecCCCceEEEEEec
Confidence 887 3344 99999999999987752 22222222 3346678999999995 4455553 8999999875
|
|
| >KOG0263|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-32 Score=260.52 Aligned_cols=166 Identities=23% Similarity=0.407 Sum_probs=152.1
Q ss_pred EecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCC
Q psy14130 170 MDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPR 249 (494)
Q Consensus 170 ~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~ 249 (494)
..++||..+|.++.|+|.| .++||||.|++.++|......+++.+.+|.+.|.|+.|+|+..++++||.|.+||+||+.
T Consensus 487 V~y~GH~~PVwdV~F~P~G-yYFatas~D~tArLWs~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~ 565 (707)
T KOG0263|consen 487 VIYKGHLAPVWDVQFAPRG-YYFATASHDQTARLWSTDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVS 565 (707)
T ss_pred EEecCCCcceeeEEecCCc-eEEEecCCCceeeeeecccCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcC
Confidence 3455799999999999998 899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEE
Q psy14130 250 TGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAG 329 (494)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g 329 (494)
+|..++.+.+|.+. +.+++|+|+ ++.+++| +.|+.|++||+.++.....+. +|.+.+.++.|+.||..| |+|
T Consensus 566 ~G~~VRiF~GH~~~-V~al~~Sp~-Gr~LaSg---~ed~~I~iWDl~~~~~v~~l~--~Ht~ti~SlsFS~dg~vL-asg 637 (707)
T KOG0263|consen 566 TGNSVRIFTGHKGP-VTALAFSPC-GRYLASG---DEDGLIKIWDLANGSLVKQLK--GHTGTIYSLSFSRDGNVL-ASG 637 (707)
T ss_pred CCcEEEEecCCCCc-eEEEEEcCC-CceEeec---ccCCcEEEEEcCCCcchhhhh--cccCceeEEEEecCCCEE-Eec
Confidence 99999999999998 999999998 7888888 899999999999876554443 467889999999999999 999
Q ss_pred eCCCcEEEEEeeCCC
Q psy14130 330 KGDGNIRYYELTNER 344 (494)
Q Consensus 330 ~~dg~i~~wd~~~~~ 344 (494)
+.|++|++||+..-.
T Consensus 638 g~DnsV~lWD~~~~~ 652 (707)
T KOG0263|consen 638 GADNSVRLWDLTKVI 652 (707)
T ss_pred CCCCeEEEEEchhhc
Confidence 999999999997643
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-30 Score=255.16 Aligned_cols=269 Identities=16% Similarity=0.198 Sum_probs=205.9
Q ss_pred CCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCCCCcccceEec
Q psy14130 93 SKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDL 172 (494)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~ 172 (494)
++|+|+|+...+ .+|.++++....++...++.+++++++.|...+||.+ +.|++|+.... .++..+
T Consensus 5 ~~~~~~~~~~~~--~~y~diri~~~~~~s~~ia~n~~~~A~~w~~~gGG~~-----gvI~L~~~~r~-------~~v~~L 70 (568)
T PTZ00420 5 PLIKNLYPDPSN--NLFDDLRICSRVIDSCGIACSSGFVAVPWEVEGGGLI-----GAIRLENQMRK-------PPVIKL 70 (568)
T ss_pred chhhhcCCchhh--CeeccEEccccccCceeEeeCCCeEEEEEEcCCCCce-----eEEEeeecCCC-------ceEEEE
Confidence 799999999776 4689999999889999999999999999988777643 35899998765 567788
Q ss_pred ccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe--------EEEEecCCCCceEEEEEcCCCCE-EEEEeCCCeE
Q psy14130 173 HGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE--------ALTVIDCHPDVINCLSFNRDGSR-LVTTCKDKTV 243 (494)
Q Consensus 173 ~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~--------~~~~~~~h~~~v~~l~~~~~~~~-l~s~~~d~~v 243 (494)
.+|.+.|.+++|+|+..++||||+.|++|++||+.++. ++..+.+|...|.+++|+|++.. |++++.|++|
T Consensus 71 ~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtI 150 (568)
T PTZ00420 71 KGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFV 150 (568)
T ss_pred cCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeE
Confidence 99999999999999744799999999999999997542 34567899999999999998875 5789999999
Q ss_pred EEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceE-----EeEE
Q psy14130 244 RVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVL-----FPYY 318 (494)
Q Consensus 244 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~-----~~~~ 318 (494)
++||+++++.+..+. |... +.++.|++++ .+++++ +.|+.|+|||+++......+. .|...+. ...|
T Consensus 151 rIWDl~tg~~~~~i~-~~~~-V~SlswspdG-~lLat~---s~D~~IrIwD~Rsg~~i~tl~--gH~g~~~s~~v~~~~f 222 (568)
T PTZ00420 151 NIWDIENEKRAFQIN-MPKK-LSSLKWNIKG-NLLSGT---CVGKHMHIIDPRKQEIASSFH--IHDGGKNTKNIWIDGL 222 (568)
T ss_pred EEEECCCCcEEEEEe-cCCc-EEEEEECCCC-CEEEEE---ecCCEEEEEECCCCcEEEEEe--cccCCceeEEEEeeeE
Confidence 999999998777765 4444 8999999985 555666 589999999999865433332 2333322 2235
Q ss_pred eCCCCEEEEEEeCC----CcEEEEEeeC-CCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 319 DHDTRILFLAGKGD----GNIRYYELTN-ERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 319 ~~~~~~l~~~g~~d----g~i~~wd~~~-~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
++++.+| ++++.| +.|++||++. ++++... ........+......+++.+++++ |+.+|+|++..
T Consensus 223 s~d~~~I-lTtG~d~~~~R~VkLWDlr~~~~pl~~~-~ld~~~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~~ 294 (568)
T PTZ00420 223 GGDDNYI-LSTGFSKNNMREMKLWDLKNTTSALVTM-SIDNASAPLIPHYDESTGLIYLIGKGDGNCRYYQHSL 294 (568)
T ss_pred cCCCCEE-EEEEcCCCCccEEEEEECCCCCCceEEE-EecCCccceEEeeeCCCCCEEEEEECCCeEEEEEccC
Confidence 6898988 554454 3799999995 4543322 221222333444445567777765 99999999976
|
|
| >KOG0295|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-31 Score=232.79 Aligned_cols=216 Identities=19% Similarity=0.282 Sum_probs=190.2
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcC
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNR 229 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~ 229 (494)
.+++||..+. .+++..+.+|...|.++.|-|.| .+++|++.|.+|+.|++.++.++.++.+|.+.|..++.+.
T Consensus 173 ~~~LWd~~~~------~~c~ks~~gh~h~vS~V~f~P~g-d~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~ 245 (406)
T KOG0295|consen 173 SAKLWDFDTF------FRCIKSLIGHEHGVSSVFFLPLG-DHILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQ 245 (406)
T ss_pred chhheeHHHH------HHHHHHhcCcccceeeEEEEecC-CeeeecccccceeEEecccceeEEeccCchHhEEEEEecC
Confidence 3899998864 16778889999999999999998 7999999999999999999999999999999999999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECC--------------CCeEEEEEecCCCCceEEEEeC
Q psy14130 230 DGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGD--------------TGRIVTTGFSRHSDRQVGLWDE 295 (494)
Q Consensus 230 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~l~~~g~~~~~d~~i~iwd~ 295 (494)
||.++++++.|.+|++|-+.++++...+..|... +.+++|.|. ++.++.+| +.|++|++||+
T Consensus 246 DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh~-vEci~wap~~~~~~i~~at~~~~~~~~l~s~---SrDktIk~wdv 321 (406)
T KOG0295|consen 246 DGTIIASCSNDQTLRVWVVATKQCKAELREHEHP-VECIAWAPESSYPSISEATGSTNGGQVLGSG---SRDKTIKIWDV 321 (406)
T ss_pred CeeEEEecCCCceEEEEEeccchhhhhhhccccc-eEEEEecccccCcchhhccCCCCCccEEEee---cccceEEEEec
Confidence 9999999999999999999999888888889887 888888763 23688888 89999999999
Q ss_pred CCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec-
Q psy14130 296 NDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ- 374 (494)
Q Consensus 296 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~- 374 (494)
.++...+.+ .+|.+.|..++|+|.|++| +++..|+++++||+++.++... +. .+..-++++.|+.+..+++++
T Consensus 322 ~tg~cL~tL--~ghdnwVr~~af~p~Gkyi-~ScaDDktlrvwdl~~~~cmk~-~~--ah~hfvt~lDfh~~~p~VvTGs 395 (406)
T KOG0295|consen 322 STGMCLFTL--VGHDNWVRGVAFSPGGKYI-LSCADDKTLRVWDLKNLQCMKT-LE--AHEHFVTSLDFHKTAPYVVTGS 395 (406)
T ss_pred cCCeEEEEE--ecccceeeeeEEcCCCeEE-EEEecCCcEEEEEeccceeeec-cC--CCcceeEEEecCCCCceEEecc
Confidence 987665444 3577899999999999999 8889999999999999987533 33 346679999999988888887
Q ss_pred -cceeEEEE
Q psy14130 375 -CEIFRFFK 382 (494)
Q Consensus 375 -~~~~~~~~ 382 (494)
|..+++|.
T Consensus 396 Vdqt~KvwE 404 (406)
T KOG0295|consen 396 VDQTVKVWE 404 (406)
T ss_pred ccceeeeee
Confidence 88899885
|
|
| >KOG0266|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-30 Score=256.94 Aligned_cols=291 Identities=19% Similarity=0.319 Sum_probs=222.2
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 82 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~ 82 (494)
+.|..+|.++.|+| +|++|++++.|+.++ +|.....+. .....
T Consensus 156 ~~~~~sv~~~~fs~-~g~~l~~~~~~~~i~-~~~~~~~~~---~~~~~-------------------------------- 198 (456)
T KOG0266|consen 156 GHECPSVTCVDFSP-DGRALAAASSDGLIR-IWKLEGIKS---NLLRE-------------------------------- 198 (456)
T ss_pred ccccCceEEEEEcC-CCCeEEEccCCCcEE-Eeecccccc---hhhcc--------------------------------
Confidence 44588999999999 899999999999999 776522221 00000
Q ss_pred eccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCC
Q psy14130 83 PIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLS 162 (494)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~ 162 (494)
...+...+.-+++.|....++. ++.+ .+|+|||+....
T Consensus 199 -------------------------------l~~h~~~v~~~~fs~d~~~l~s-~s~D--------~tiriwd~~~~~-- 236 (456)
T KOG0266|consen 199 -------------------------------LSGHTRGVSDVAFSPDGSYLLS-GSDD--------KTLRIWDLKDDG-- 236 (456)
T ss_pred -------------------------------ccccccceeeeEECCCCcEEEE-ecCC--------ceEEEeeccCCC--
Confidence 0111122333444443332222 2223 379999994432
Q ss_pred CCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCe
Q psy14130 163 GNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKT 242 (494)
Q Consensus 163 ~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~ 242 (494)
..++++.||...|++++|+|.+ +++++|+.|++|+|||+++++++..+.+|.+.|++++|++++++|++++.|+.
T Consensus 237 ----~~~~~l~gH~~~v~~~~f~p~g-~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~ 311 (456)
T KOG0266|consen 237 ----RNLKTLKGHSTYVTSVAFSPDG-NLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGT 311 (456)
T ss_pred ----eEEEEecCCCCceEEEEecCCC-CEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCCcc
Confidence 6678999999999999999999 89999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCc--eEEEeeecCCC-CceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCC-CceEEeEE
Q psy14130 243 VRVLDPRTGL--VISQGVCHPGT-RSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSS-SGVLFPYY 318 (494)
Q Consensus 243 v~iwd~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~-~~v~~~~~ 318 (494)
|++||+.++. ++..+..+... .+..+.|+|++..+++.. .|+.+++||++....+......... ..+.+..+
T Consensus 312 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~----~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~ 387 (456)
T KOG0266|consen 312 IRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSAS----LDRTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTL 387 (456)
T ss_pred EEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEec----CCCeEEEEEccCCcceeeecccCCcceeEecccc
Confidence 9999999999 56777777665 578899999955555554 8999999999987766555443222 23445566
Q ss_pred eCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec----cceeEEEEee
Q psy14130 319 DHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ----CEIFRFFKLH 384 (494)
Q Consensus 319 ~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~----~~~~~~~~l~ 384 (494)
++.+.++ ++|+.|+.|++||+.++..+... ..+. ...+..++++|...++++. |+.+++|+..
T Consensus 388 ~~~~~~i-~sg~~d~~v~~~~~~s~~~~~~l-~~h~-~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~~~ 454 (456)
T KOG0266|consen 388 STGGKLI-YSGSEDGSVYVWDSSSGGILQRL-EGHS-KAAVSDLSSHPTENLIASSSFEGDGLIRLWKYD 454 (456)
T ss_pred cCCCCeE-EEEeCCceEEEEeCCccchhhhh-cCCC-CCceeccccCCCcCeeeecCcCCCceEEEecCC
Confidence 7888888 99999999999999997664333 3332 5778999999999888874 6889999754
|
|
| >KOG0273|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-30 Score=233.26 Aligned_cols=274 Identities=18% Similarity=0.312 Sum_probs=218.3
Q ss_pred cceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccc-----cCcccccccccceeecCCceEEEEEEEecCceEEE
Q psy14130 7 GPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYD-----NVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLV 81 (494)
Q Consensus 7 ~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v 81 (494)
..|++|+|+. +|..||||+.||.+| +|+........+. .+.+..+..+..+++.+-+...++|+...|.....
T Consensus 236 kdVT~L~Wn~-~G~~LatG~~~G~~r-iw~~~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~ 313 (524)
T KOG0273|consen 236 KDVTSLDWNN-DGTLLATGSEDGEAR-IWNKDGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQ 313 (524)
T ss_pred CCcceEEecC-CCCeEEEeecCcEEE-EEecCchhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEe
Confidence 4699999999 899999999999999 8887654332221 22334455566677777888888888766655554
Q ss_pred EeccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCC
Q psy14130 82 LPIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGL 161 (494)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~ 161 (494)
++++.. ...|+.+... ..++..... +.|+++.+...
T Consensus 314 f~~~s~-----------------------------~~lDVdW~~~----~~F~ts~td---------~~i~V~kv~~~-- 349 (524)
T KOG0273|consen 314 FEFHSA-----------------------------PALDVDWQSN----DEFATSSTD---------GCIHVCKVGED-- 349 (524)
T ss_pred eeeccC-----------------------------CccceEEecC----ceEeecCCC---------ceEEEEEecCC--
Confidence 444321 1123333321 122222222 25899999887
Q ss_pred CCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCC---------C
Q psy14130 162 SGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDG---------S 232 (494)
Q Consensus 162 ~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~---------~ 232 (494)
.|..++.||.++|.++.|+|.+ .+|+|+|.|++++||..........+.+|...|+.+.|+|.| .
T Consensus 350 -----~P~~t~~GH~g~V~alk~n~tg-~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~ 423 (524)
T KOG0273|consen 350 -----RPVKTFIGHHGEVNALKWNPTG-SLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNL 423 (524)
T ss_pred -----CcceeeecccCceEEEEECCCC-ceEEEecCCCeeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCc
Confidence 8889999999999999999999 799999999999999999899999999999999999999964 4
Q ss_pred EEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCc
Q psy14130 233 RLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSG 312 (494)
Q Consensus 233 ~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 312 (494)
.|++++.|++|++||+..+.+++.+..|..+ +..++|+|+ ++++++| +.||.|.+|+.+..+. +........
T Consensus 424 ~l~sas~dstV~lwdv~~gv~i~~f~kH~~p-VysvafS~~-g~ylAsG---s~dg~V~iws~~~~~l---~~s~~~~~~ 495 (524)
T KOG0273|consen 424 MLASASFDSTVKLWDVESGVPIHTLMKHQEP-VYSVAFSPN-GRYLASG---SLDGCVHIWSTKTGKL---VKSYQGTGG 495 (524)
T ss_pred eEEEeecCCeEEEEEccCCceeEeeccCCCc-eEEEEecCC-CcEEEec---CCCCeeEeccccchhe---eEeecCCCe
Confidence 8999999999999999999999999999998 999999999 7888899 8999999999987654 444456678
Q ss_pred eEEeEEeCCCCEEEEEEeCCCcEEEEEee
Q psy14130 313 VLFPYYDHDTRILFLAGKGDGNIRYYELT 341 (494)
Q Consensus 313 v~~~~~~~~~~~l~~~g~~dg~i~~wd~~ 341 (494)
|..++|+.+|..| ..+-.|+.+++.|++
T Consensus 496 Ifel~Wn~~G~kl-~~~~sd~~vcvldlr 523 (524)
T KOG0273|consen 496 IFELCWNAAGDKL-GACASDGSVCVLDLR 523 (524)
T ss_pred EEEEEEcCCCCEE-EEEecCCCceEEEec
Confidence 9999999999998 666689999999986
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-29 Score=268.55 Aligned_cols=220 Identities=17% Similarity=0.296 Sum_probs=174.5
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.|+|||+.++ +.+..+.+|.+.|++++|+|....+|++|+.|++|++||+.++..+..+..+ ..|.++.|+
T Consensus 555 g~v~lWd~~~~-------~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~-~~v~~v~~~ 626 (793)
T PLN00181 555 GVVQVWDVARS-------QLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK-ANICCVQFP 626 (793)
T ss_pred CeEEEEECCCC-------eEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecC-CCeEEEEEe
Confidence 37999999887 6677888999999999999743479999999999999999999988888754 689999995
Q ss_pred -CCCCEEEEEeCCCeEEEEeCCCCc-eEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCC---cee
Q psy14130 229 -RDGSRLVTTCKDKTVRVLDPRTGL-VISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNT---PLA 303 (494)
Q Consensus 229 -~~~~~l~s~~~d~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~---~~~ 303 (494)
++|.+|++|+.|+.|++||+++++ .+..+.+|... +..+.|. ++..+++++ .|++|++||++.... ...
T Consensus 627 ~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~-V~~v~f~-~~~~lvs~s----~D~~ikiWd~~~~~~~~~~~~ 700 (793)
T PLN00181 627 SESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKT-VSYVRFV-DSSTLVSSS----TDNTLKLWDLSMSISGINETP 700 (793)
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCC-EEEEEEe-CCCEEEEEE----CCCEEEEEeCCCCccccCCcc
Confidence 479999999999999999999876 56777889887 8889897 435555544 899999999975321 011
Q ss_pred Eee-ecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecc----------cccCCCCeeEEEEecCCceee
Q psy14130 304 LET-VDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLN----------QSLSGAPQRGLGFMPKRGCDV 372 (494)
Q Consensus 304 ~~~-~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~----------~~~~~~~v~~~~~~p~~~~~~ 372 (494)
+.. ..|...+.++.|+|++++| ++|+.|+.|++|+.....+...+.. ...+...|.+++|+|++..++
T Consensus 701 l~~~~gh~~~i~~v~~s~~~~~l-asgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lv 779 (793)
T PLN00181 701 LHSFMGHTNVKNFVGLSVSDGYI-ATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLV 779 (793)
T ss_pred eEEEcCCCCCeeEEEEcCCCCEE-EEEeCCCEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCCeEE
Confidence 122 2455678889999999988 9999999999999876654322211 112345699999999998888
Q ss_pred ec--cceeEEEEe
Q psy14130 373 TQ--CEIFRFFKL 383 (494)
Q Consensus 373 ~~--~~~~~~~~l 383 (494)
++ ++.+++|++
T Consensus 780 a~~~dG~I~i~~~ 792 (793)
T PLN00181 780 AANSTGNIKILEM 792 (793)
T ss_pred EecCCCcEEEEec
Confidence 75 899999986
|
|
| >KOG0277|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-31 Score=221.34 Aligned_cols=223 Identities=18% Similarity=0.223 Sum_probs=190.3
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEE
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSF 227 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~ 227 (494)
+++++|||+.... .|++.++.|..+|.++.|++.....++++|.|++|++||...++.++++.+|...|+..+|
T Consensus 82 DGSLrl~d~~~~s------~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~ 155 (311)
T KOG0277|consen 82 DGSLRLFDLTMPS------KPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAF 155 (311)
T ss_pred CceEEEeccCCCC------cchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEec
Confidence 3479999965543 6888999999999999999987778899999999999999999999999999999999999
Q ss_pred cC-CCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEee
Q psy14130 228 NR-DGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALET 306 (494)
Q Consensus 228 ~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~ 306 (494)
+| .+++++++|.|+++++||++..-....+..|... +.++.|+.-+..++++| +.|+.|+.||+++.+.|+...
T Consensus 156 sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~E-il~cdw~ky~~~vl~Tg---~vd~~vr~wDir~~r~pl~eL- 230 (311)
T KOG0277|consen 156 SPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSE-ILCCDWSKYNHNVLATG---GVDNLVRGWDIRNLRTPLFEL- 230 (311)
T ss_pred CCCCCCeEEEccCCceEEEEEecCCCceeEEEeccce-eEeecccccCCcEEEec---CCCceEEEEehhhccccceee-
Confidence 99 6789999999999999999876655558999866 89999999889999999 899999999999988776543
Q ss_pred ecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecC-Cceeeec--cceeEEEEe
Q psy14130 307 VDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPK-RGCDVTQ--CEIFRFFKL 383 (494)
Q Consensus 307 ~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~-~~~~~~~--~~~~~~~~l 383 (494)
..|.-.|+.+.|||...-|+++++.|-+++|||...+........ .|..-+.++.|++- ...+++. |+.+.+|+.
T Consensus 231 ~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds~~e~~~--~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 231 NGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQDSAIETVD--HHTEFVCGLDWSLFDPGQVASTGWDELLYVWNP 308 (311)
T ss_pred cCCceEEEEEecCcchhhHhhhccccceEEecccccchhhhhhhh--ccceEEeccccccccCceeeecccccceeeecc
Confidence 567789999999999988889999999999999987654433333 24577999999984 4445543 999999973
|
|
| >KOG0318|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-29 Score=229.85 Aligned_cols=332 Identities=16% Similarity=0.189 Sum_probs=240.8
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 82 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~ 82 (494)
.+|..+|+-..|+| .|.|+|||...|+|| +|+...+.......+++...+... ++++.+..-++...+|
T Consensus 56 tEH~~~vtVAkySP-sG~yiASGD~sG~vR-IWdtt~~~hiLKnef~v~aG~I~D--i~Wd~ds~RI~avGEG------- 124 (603)
T KOG0318|consen 56 TEHAHQVTVAKYSP-SGFYIASGDVSGKVR-IWDTTQKEHILKNEFQVLAGPIKD--ISWDFDSKRIAAVGEG------- 124 (603)
T ss_pred ccccceeEEEEeCC-CceEEeecCCcCcEE-EEeccCcceeeeeeeeeccccccc--ceeCCCCcEEEEEecC-------
Confidence 57999999999999 899999999999999 998765433222233332222221 2222222211111111
Q ss_pred eccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCC
Q psy14130 83 PIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLS 162 (494)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~ 162 (494)
..+|.++|...... ..-.+.......+.|.+.|..---+...+++ +.|-+|+-+.-
T Consensus 125 ---------rerfg~~F~~DSG~----SvGei~GhSr~ins~~~KpsRPfRi~T~sdD--------n~v~ffeGPPF--- 180 (603)
T KOG0318|consen 125 ---------RERFGHVFLWDSGN----SVGEITGHSRRINSVDFKPSRPFRIATGSDD--------NTVAFFEGPPF--- 180 (603)
T ss_pred ---------ccceeEEEEecCCC----ccceeeccceeEeeeeccCCCceEEEeccCC--------CeEEEeeCCCe---
Confidence 12244444333221 1112333344455555555443333333444 36888876554
Q ss_pred CCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEec---CCCCceEEEEEcCCCCEEEEEeC
Q psy14130 163 GNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVID---CHPDVINCLSFNRDGSRLVTTCK 239 (494)
Q Consensus 163 ~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~---~h~~~v~~l~~~~~~~~l~s~~~ 239 (494)
+...++..|..-|.|++|+|+| .+++|++.||+|.+||-.+|+.+..+. +|.+.|++++|+||+..++|++.
T Consensus 181 ----KFk~s~r~HskFV~~VRysPDG-~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~Sa 255 (603)
T KOG0318|consen 181 ----KFKSSFREHSKFVNCVRYSPDG-SRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSA 255 (603)
T ss_pred ----eeeecccccccceeeEEECCCC-CeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecC
Confidence 5556778899999999999998 699999999999999999999999998 89999999999999999999999
Q ss_pred CCeEEEEeCCCCceEEEeeecCC--CCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeE
Q psy14130 240 DKTVRVLDPRTGLVISQGVCHPG--TRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPY 317 (494)
Q Consensus 240 d~~v~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~ 317 (494)
|++++|||+.+.++++++..... .+-..+.|. ...|+++. .+|.|.+++......+..+ .+|...|+++.
T Consensus 256 Dkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWq--kd~lItVS----l~G~in~ln~~d~~~~~~i--~GHnK~ITaLt 327 (603)
T KOG0318|consen 256 DKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQ--KDHLITVS----LSGTINYLNPSDPSVLKVI--SGHNKSITALT 327 (603)
T ss_pred CceEEEEEeeccceEEEeecCCchhceEEEEEEe--CCeEEEEE----cCcEEEEecccCCChhhee--cccccceeEEE
Confidence 99999999999999999876544 335567776 35788887 8999999999887743333 45788999999
Q ss_pred EeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec-cceeEEEEeeC
Q psy14130 318 YDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ-CEIFRFFKLHT 385 (494)
Q Consensus 318 ~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~-~~~~~~~~l~~ 385 (494)
.+|++++| .+|+.||.|.-||..++..- .+..-.+...|.+++-+..+.++.++ |..+|+..+..
T Consensus 328 v~~d~~~i-~SgsyDG~I~~W~~~~g~~~--~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~ 393 (603)
T KOG0318|consen 328 VSPDGKTI-YSGSYDGHINSWDSGSGTSD--RLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKD 393 (603)
T ss_pred EcCCCCEE-EeeccCceEEEEecCCcccc--ccccccccceEEEEeecCCCcEEEEecCCeEEEEeccc
Confidence 99999999 99999999999999988752 22233457889999999877776666 99999987744
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.5e-29 Score=232.77 Aligned_cols=215 Identities=25% Similarity=0.440 Sum_probs=179.1
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.|++|++.++ +....+.+|...|.++.|++++ .++++++.|+.|++||+.+++....+..|...|.+++|+
T Consensus 73 ~~i~i~~~~~~-------~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~ 144 (289)
T cd00200 73 KTIRLWDLETG-------ECVRTLTGHTSYVSSVAFSPDG-RILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFS 144 (289)
T ss_pred CeEEEEEcCcc-------cceEEEeccCCcEEEEEEcCCC-CEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEc
Confidence 47999999886 4556777899999999999996 688888889999999999899999999999999999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD 308 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~ 308 (494)
|++.++++++.|+.|++||+++++.+..+..|... +..+.|.+++..+++++ .++.|++||++......... .
T Consensus 145 ~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~-i~~~~~~~~~~~l~~~~----~~~~i~i~d~~~~~~~~~~~--~ 217 (289)
T cd00200 145 PDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGE-VNSVAFSPDGEKLLSSS----SDGTIKLWDLSTGKCLGTLR--G 217 (289)
T ss_pred CcCCEEEEEcCCCcEEEEEccccccceeEecCccc-cceEEECCCcCEEEEec----CCCcEEEEECCCCceecchh--h
Confidence 99999999888999999999999988888888766 89999999965666666 69999999998644322221 3
Q ss_pred CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEE
Q psy14130 309 SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFK 382 (494)
Q Consensus 309 ~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~ 382 (494)
+...+.++.|+|++.++ ++++.||.|++||+.+++....+. .+...+.+++|+|++..++++ ++.+++|+
T Consensus 218 ~~~~i~~~~~~~~~~~~-~~~~~~~~i~i~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 218 HENGVNSVAFSPDGYLL-ASGSEDGTIRVWDLRTGECVQTLS---GHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred cCCceEEEEEcCCCcEE-EEEcCCCcEEEEEcCCceeEEEcc---ccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence 55689999999996666 777779999999999877644433 335679999999998777764 78899985
|
|
| >KOG0284|consensus | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-31 Score=238.53 Aligned_cols=246 Identities=24% Similarity=0.369 Sum_probs=201.5
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 82 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~ 82 (494)
..|..+|.++.|++ ++.+++||+.+|.|+ +|...- .++.....++.
T Consensus 135 QaHDs~Vr~m~ws~-~g~wmiSgD~gG~iK-yWqpnm------nnVk~~~ahh~-------------------------- 180 (464)
T KOG0284|consen 135 QAHDSPVRTMKWSH-NGTWMISGDKGGMIK-YWQPNM------NNVKIIQAHHA-------------------------- 180 (464)
T ss_pred hhhcccceeEEEcc-CCCEEEEcCCCceEE-ecccch------hhhHHhhHhhh--------------------------
Confidence 57999999999999 899999999999999 885321 11111111110
Q ss_pred eccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCC
Q psy14130 83 PIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLS 162 (494)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~ 162 (494)
..+...+++|+-..++. ++++| .|+|||....
T Consensus 181 ------------------------------------eaIRdlafSpnDskF~t-~SdDg--------~ikiWdf~~~--- 212 (464)
T KOG0284|consen 181 ------------------------------------EAIRDLAFSPNDSKFLT-CSDDG--------TIKIWDFRMP--- 212 (464)
T ss_pred ------------------------------------hhhheeccCCCCceeEE-ecCCC--------eEEEEeccCC---
Confidence 11222223332222222 23443 7999999877
Q ss_pred CCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCe
Q psy14130 163 GNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKT 242 (494)
Q Consensus 163 ~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~ 242 (494)
.....+.||.-.|.|++|||.. .++|+||.|..|++||.++++++.++.+|...|..+.|++++++|+|+|+|..
T Consensus 213 ----kee~vL~GHgwdVksvdWHP~k-gLiasgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~ 287 (464)
T KOG0284|consen 213 ----KEERVLRGHGWDVKSVDWHPTK-GLIASGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQS 287 (464)
T ss_pred ----chhheeccCCCCcceeccCCcc-ceeEEccCCceeEeecCCCcchhhhhhhccceEEEEEEcCCCCeeEEccCCce
Confidence 5566789999999999999997 69999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCC
Q psy14130 243 VRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDT 322 (494)
Q Consensus 243 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 322 (494)
++++|+++.+.+..+.+|... +.++.|+|-...||++| +.||.|..|.+.. ..++......|...|.+++|+|-|
T Consensus 288 ~kv~DiR~mkEl~~~r~Hkkd-v~~~~WhP~~~~lftsg---g~Dgsvvh~~v~~-~~p~~~i~~AHd~~iwsl~~hPlG 362 (464)
T KOG0284|consen 288 CKVFDIRTMKELFTYRGHKKD-VTSLTWHPLNESLFTSG---GSDGSVVHWVVGL-EEPLGEIPPAHDGEIWSLAYHPLG 362 (464)
T ss_pred EEEEehhHhHHHHHhhcchhh-heeeccccccccceeec---cCCCceEEEeccc-cccccCCCcccccceeeeeccccc
Confidence 999999998899999999998 99999999999999999 8999999999873 344444555677899999999999
Q ss_pred CEEEEEEeCCCcEEEEEee
Q psy14130 323 RILFLAGKGDGNIRYYELT 341 (494)
Q Consensus 323 ~~l~~~g~~dg~i~~wd~~ 341 (494)
..| ++|+.|.++++|.-.
T Consensus 363 hil-~tgsnd~t~rfw~r~ 380 (464)
T KOG0284|consen 363 HIL-ATGSNDRTVRFWTRN 380 (464)
T ss_pred eeE-eecCCCcceeeeccC
Confidence 888 999999999999754
|
|
| >KOG0265|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=217.61 Aligned_cols=215 Identities=17% Similarity=0.233 Sum_probs=180.4
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
.+|+.||++++ +.+..+++|.+.|+++.-+.-|..++.|++.|+++++||+++...++++. ....++++.|.
T Consensus 112 k~v~~wD~~tG-------~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~-~kyqltAv~f~ 183 (338)
T KOG0265|consen 112 KTVRGWDAETG-------KRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFE-NKYQLTAVGFK 183 (338)
T ss_pred ceEEEEecccc-------eeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccc-cceeEEEEEec
Confidence 47999999999 77889999999999999777787899999999999999999998888886 56789999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCcee----E
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLA----L 304 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~----~ 304 (494)
.++..+.+|+-|+.|++||++.+..+..+.+|... ++.+..++.+..+++-+ .|.++++||++....... .
T Consensus 184 d~s~qv~sggIdn~ikvWd~r~~d~~~~lsGh~Dt-It~lsls~~gs~llsns----Md~tvrvwd~rp~~p~~R~v~if 258 (338)
T KOG0265|consen 184 DTSDQVISGGIDNDIKVWDLRKNDGLYTLSGHADT-ITGLSLSRYGSFLLSNS----MDNTVRVWDVRPFAPSQRCVKIF 258 (338)
T ss_pred ccccceeeccccCceeeeccccCcceEEeecccCc-eeeEEeccCCCcccccc----ccceEEEEEecccCCCCceEEEe
Confidence 99999999999999999999999999999999998 99999999988888777 899999999986433222 1
Q ss_pred eeecCC--CceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEE
Q psy14130 305 ETVDSS--SGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRF 380 (494)
Q Consensus 305 ~~~~~~--~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~ 380 (494)
....|. ...+.++|+|++..+ .+|+.|..+++||...... ...+..+ ...|..+.|+|...++.+. |.++.+
T Consensus 259 ~g~~hnfeknlL~cswsp~~~~i-~ags~dr~vyvwd~~~r~~-lyklpGh--~gsvn~~~Fhp~e~iils~~sdk~i~l 334 (338)
T KOG0265|consen 259 QGHIHNFEKNLLKCSWSPNGTKI-TAGSADRFVYVWDTTSRRI-LYKLPGH--YGSVNEVDFHPTEPIILSCSSDKTIYL 334 (338)
T ss_pred ecchhhhhhhcceeeccCCCCcc-ccccccceEEEeecccccE-EEEcCCc--ceeEEEeeecCCCcEEEEeccCceeEe
Confidence 222222 345678999999999 9999999999999987665 3444443 5779999999998877764 655544
|
|
| >KOG0319|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-29 Score=241.97 Aligned_cols=222 Identities=19% Similarity=0.287 Sum_probs=186.7
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeE-----EE----EecCC
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEA-----LT----VIDCH 218 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~-----~~----~~~~h 218 (494)
++++++|.+.++... ..++....||+..|.+++++..+..+|+++|.|+++++|++...+. +. +...|
T Consensus 386 D~svilWr~~~~~~~---~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aH 462 (775)
T KOG0319|consen 386 DKSVILWRLNNNCSK---SLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAH 462 (775)
T ss_pred CceEEEEEecCCcch---hhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhh
Confidence 456999988544221 1455677899999999999998889999999999999999976221 11 23469
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCC
Q psy14130 219 PDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDL 298 (494)
Q Consensus 219 ~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~ 298 (494)
...|++++.+|+.++|+|||.|++.+||++.+...+..+.+|... +.++.|++. .++++++ +.|++|+||.+.++
T Consensus 463 dKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RG-vw~V~Fs~~-dq~laT~---SgD~TvKIW~is~f 537 (775)
T KOG0319|consen 463 DKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRG-VWCVSFSKN-DQLLATC---SGDKTVKIWSISTF 537 (775)
T ss_pred cccccceEecCCCceEEecccccceeeecccCceEEEEeeCCccc-eEEEEeccc-cceeEec---cCCceEEEEEeccc
Confidence 999999999999999999999999999999999999999999998 999999998 6777777 79999999999998
Q ss_pred CCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cc
Q psy14130 299 NTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CE 376 (494)
Q Consensus 299 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~ 376 (494)
....++. +|...|..+.|-.+++.| ++++.||.|++|++.++.+...+ .. |.+.|++++.+|+...++++ |+
T Consensus 538 SClkT~e--GH~~aVlra~F~~~~~ql-iS~~adGliKlWnikt~eC~~tl-D~--H~DrvWaL~~~~~~~~~~tgg~Dg 611 (775)
T KOG0319|consen 538 SCLKTFE--GHTSAVLRASFIRNGKQL-ISAGADGLIKLWNIKTNECEMTL-DA--HNDRVWALSVSPLLDMFVTGGGDG 611 (775)
T ss_pred eeeeeec--CccceeEeeeeeeCCcEE-EeccCCCcEEEEeccchhhhhhh-hh--ccceeEEEeecCccceeEecCCCe
Confidence 7754443 377899999999999999 89999999999999999985443 33 46889999999999988864 88
Q ss_pred eeEEEEe
Q psy14130 377 IFRFFKL 383 (494)
Q Consensus 377 ~~~~~~l 383 (494)
.+.+|+=
T Consensus 612 ~i~~wkD 618 (775)
T KOG0319|consen 612 RIIFWKD 618 (775)
T ss_pred EEEEeec
Confidence 8888863
|
|
| >KOG0273|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-29 Score=226.89 Aligned_cols=327 Identities=16% Similarity=0.147 Sum_probs=231.7
Q ss_pred cccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccc--cCcc--------cccccccceeecCCceEEEEEEEe
Q psy14130 5 YRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYD--NVPI--------TRNAHDSHFCAANPKFVAVVTEVA 74 (494)
Q Consensus 5 H~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~--~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~ 74 (494)
|..+|.+.+|+|....+|++|+.|-+.| +|.+......+.. .++. .....+-.-+++|.++..++....
T Consensus 177 ~~~~V~~~~WnP~~~~llasg~~~s~ar-i~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~LatG~~ 255 (524)
T KOG0273|consen 177 HESEVFICAWNPLRDGLLASGSGDSTAR-IWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLLATGSE 255 (524)
T ss_pred CCCceEEEecCchhhhhhhccCCcccee-eeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCeEEEeec
Confidence 9999999999995555999999999999 8877642111100 0110 001112222333333322222221
Q ss_pred cCceEEEEeccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEE
Q psy14130 75 GGGAFLVLPIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLW 154 (494)
Q Consensus 75 ~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw 154 (494)
+ |.+.++..... .... +..+...+..+.||.+...++. ..-++++.||
T Consensus 256 ~-G~~riw~~~G~-------l~~t---------------l~~HkgPI~slKWnk~G~yilS---------~~vD~ttilw 303 (524)
T KOG0273|consen 256 D-GEARIWNKDGN-------LIST---------------LGQHKGPIFSLKWNKKGTYILS---------GGVDGTTILW 303 (524)
T ss_pred C-cEEEEEecCch-------hhhh---------------hhccCCceEEEEEcCCCCEEEe---------ccCCccEEEE
Confidence 1 22222111110 0000 0111122233344433322222 2223479999
Q ss_pred EcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEE
Q psy14130 155 YIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRL 234 (494)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l 234 (494)
|..++ +..+.+.-|..+-..+.|-.+. -+++++.|+.|+++.+....++.++.+|.+.|.++.|+|.|.+|
T Consensus 304 d~~~g-------~~~q~f~~~s~~~lDVdW~~~~--~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LL 374 (524)
T KOG0273|consen 304 DAHTG-------TVKQQFEFHSAPALDVDWQSND--EFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLL 374 (524)
T ss_pred eccCc-------eEEEeeeeccCCccceEEecCc--eEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceE
Confidence 99888 6677777788887889998774 79999999999999999999999999999999999999999999
Q ss_pred EEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCC--------CeEEEEEecCCCCceEEEEeCCCCCCceeEee
Q psy14130 235 VTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDT--------GRIVTTGFSRHSDRQVGLWDENDLNTPLALET 306 (494)
Q Consensus 235 ~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~ 306 (494)
+|+|.|++++||....+.....+.+|... +..+.|+|.+ +..++++ +.|++|++||+..+.....+
T Consensus 375 aS~SdD~TlkiWs~~~~~~~~~l~~Hske-i~t~~wsp~g~v~~n~~~~~~l~sa---s~dstV~lwdv~~gv~i~~f-- 448 (524)
T KOG0273|consen 375 ASCSDDGTLKIWSMGQSNSVHDLQAHSKE-IYTIKWSPTGPVTSNPNMNLMLASA---SFDSTVKLWDVESGVPIHTL-- 448 (524)
T ss_pred EEecCCCeeEeeecCCCcchhhhhhhccc-eeeEeecCCCCccCCCcCCceEEEe---ecCCeEEEEEccCCceeEee--
Confidence 99999999999999999999999999988 8999999864 2344444 47999999999886554332
Q ss_pred ecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeee--ccceeEEEEee
Q psy14130 307 VDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVT--QCEIFRFFKLH 384 (494)
Q Consensus 307 ~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~--~~~~~~~~~l~ 384 (494)
..|..+|.+++|+|+|+++ ++|+.||.|++|+.++++.+..+ ...+.|..++|+-+|..+.. .++.+++.++.
T Consensus 449 ~kH~~pVysvafS~~g~yl-AsGs~dg~V~iws~~~~~l~~s~----~~~~~Ifel~Wn~~G~kl~~~~sd~~vcvldlr 523 (524)
T KOG0273|consen 449 MKHQEPVYSVAFSPNGRYL-ASGSLDGCVHIWSTKTGKLVKSY----QGTGGIFELCWNAAGDKLGACASDGSVCVLDLR 523 (524)
T ss_pred ccCCCceEEEEecCCCcEE-EecCCCCeeEeccccchheeEee----cCCCeEEEEEEcCCCCEEEEEecCCCceEEEec
Confidence 3588899999999999999 99999999999999999875443 34567999999999877655 48888888764
|
|
| >KOG0283|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.7e-30 Score=246.95 Aligned_cols=208 Identities=17% Similarity=0.255 Sum_probs=170.5
Q ss_pred cceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcC-CCCEEEEEeCCCeEEE
Q psy14130 167 EWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNR-DGSRLVTTCKDKTVRV 245 (494)
Q Consensus 167 ~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~-~~~~l~s~~~d~~v~i 245 (494)
+|+..+.||.+.|..+.|+.+ ++|+|+|.|.+||+|++...+++..|. |.+-|+||+|+| |.+++++||-|++|||
T Consensus 360 kP~~ef~GHt~DILDlSWSKn--~fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTcVaFnPvDDryFiSGSLD~KvRi 436 (712)
T KOG0283|consen 360 KPFCEFKGHTADILDLSWSKN--NFLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTCVAFNPVDDRYFISGSLDGKVRL 436 (712)
T ss_pred cchhhhhccchhheecccccC--CeeEeccccccEEeecCCCcceeeEEe-cCCeeEEEEecccCCCcEeecccccceEE
Confidence 678899999999999999998 499999999999999999999999998 999999999999 8899999999999999
Q ss_pred EeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecC------CCceEEeEEe
Q psy14130 246 LDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDS------SSGVLFPYYD 319 (494)
Q Consensus 246 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~------~~~v~~~~~~ 319 (494)
|++...+.+.-...+ .. |+.++|.|+ |.....| +-+|.+++|+.+..+.........+ +..|+.+.|.
T Consensus 437 WsI~d~~Vv~W~Dl~-~l-ITAvcy~Pd-Gk~avIG---t~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~ 510 (712)
T KOG0283|consen 437 WSISDKKVVDWNDLR-DL-ITAVCYSPD-GKGAVIG---TFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFF 510 (712)
T ss_pred eecCcCeeEeehhhh-hh-heeEEeccC-CceEEEE---EeccEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEec
Confidence 999988876666655 33 899999999 6666666 6899999999887543332221111 2369999999
Q ss_pred CCCCE-EEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 320 HDTRI-LFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 320 ~~~~~-l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
|...- + ++.+.|..|||||.++...+.. +..+..........|+.||..++++ |..+.+|++..
T Consensus 511 p~~~~~v-LVTSnDSrIRI~d~~~~~lv~K-fKG~~n~~SQ~~Asfs~Dgk~IVs~seDs~VYiW~~~~ 577 (712)
T KOG0283|consen 511 PGDPDEV-LVTSNDSRIRIYDGRDKDLVHK-FKGFRNTSSQISASFSSDGKHIVSASEDSWVYIWKNDS 577 (712)
T ss_pred CCCCCeE-EEecCCCceEEEeccchhhhhh-hcccccCCcceeeeEccCCCEEEEeecCceEEEEeCCC
Confidence 86653 4 4557999999999988766433 3455556677888999999999886 88899999754
|
|
| >KOG0316|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.9e-29 Score=205.73 Aligned_cols=212 Identities=21% Similarity=0.301 Sum_probs=170.4
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC--eEEEEecCCCCceEEEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKG--EALTVIDCHPDVINCLSF 227 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~--~~~~~~~~h~~~v~~l~~ 227 (494)
.|.+||+.++ +..+.+.+|...|+.++|+.+. ..+++|+.|.++++||.+.. ++++.+....+.|.++..
T Consensus 82 ~v~vwDV~TG-------kv~Rr~rgH~aqVNtV~fNees-SVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v 153 (307)
T KOG0316|consen 82 AVQVWDVNTG-------KVDRRFRGHLAQVNTVRFNEES-SVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDV 153 (307)
T ss_pred eEEEEEcccC-------eeeeecccccceeeEEEecCcc-eEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEe
Confidence 6999999999 7788999999999999999997 79999999999999998764 688889888899999998
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee
Q psy14130 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV 307 (494)
Q Consensus 228 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~ 307 (494)
+ +..|++|+.||++|.||+|.|+......+|. ++++.|+++++-.++.. .|+++++.|-.+++.......+
T Consensus 154 ~--~heIvaGS~DGtvRtydiR~G~l~sDy~g~p---it~vs~s~d~nc~La~~----l~stlrLlDk~tGklL~sYkGh 224 (307)
T KOG0316|consen 154 A--EHEIVAGSVDGTVRTYDIRKGTLSSDYFGHP---ITSVSFSKDGNCSLASS----LDSTLRLLDKETGKLLKSYKGH 224 (307)
T ss_pred c--ccEEEeeccCCcEEEEEeecceeehhhcCCc---ceeEEecCCCCEEEEee----ccceeeecccchhHHHHHhccc
Confidence 6 6789999999999999999999877777764 89999999977666665 8999999998887655444433
Q ss_pred cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCC-eeEEEEecCCceeeec-cceeEEEE
Q psy14130 308 DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAP-QRGLGFMPKRGCDVTQ-CEIFRFFK 382 (494)
Q Consensus 308 ~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~-v~~~~~~p~~~~~~~~-~~~~~~~~ 382 (494)
.....-...+++.....+ ++|++||.|++||+..+..+..+.. +..+ +.+++++|.-..++++ +....+|.
T Consensus 225 kn~eykldc~l~qsdthV-~sgSEDG~Vy~wdLvd~~~~sk~~~---~~~v~v~dl~~hp~~~~f~~A~~~~~~~~~ 297 (307)
T KOG0316|consen 225 KNMEYKLDCCLNQSDTHV-FSGSEDGKVYFWDLVDETQISKLSV---VSTVIVTDLSCHPTMDDFITATGHGDLFWY 297 (307)
T ss_pred ccceeeeeeeecccceeE-EeccCCceEEEEEeccceeeeeecc---CCceeEEeeecccCccceeEecCCceecee
Confidence 333333455666666677 9999999999999999876433321 1233 7999999987665554 55555564
|
|
| >KOG0291|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-27 Score=226.48 Aligned_cols=227 Identities=17% Similarity=0.273 Sum_probs=191.7
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCC-CeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFD-YLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d-~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
...+|+++.- ..++.+.-...+|..++|+..| ..||.|+.. |.+-||+.+...-+...++|...+++++++
T Consensus 288 ~f~LyelP~f-------~lih~LSis~~~I~t~~~N~tG-DWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YS 359 (893)
T KOG0291|consen 288 EFGLYELPDF-------NLIHSLSISDQKILTVSFNSTG-DWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYS 359 (893)
T ss_pred eeEEEecCCc-------eEEEEeecccceeeEEEecccC-CEEEEcCCccceEEEEEeeccceeeeccccccceeeEEEC
Confidence 4679999987 6677777677889999999999 477777654 799999999988888899999999999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD 308 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~ 308 (494)
|||+++++|+.||+|+|||..+|-|..++..|+.. ++.+.|+..+..+++++ -||+|+.||+...+.-.+ ...+
T Consensus 360 pDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~-Vt~v~f~~~g~~llssS----LDGtVRAwDlkRYrNfRT-ft~P 433 (893)
T KOG0291|consen 360 PDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSG-VTAVQFTARGNVLLSSS----LDGTVRAWDLKRYRNFRT-FTSP 433 (893)
T ss_pred CCCcEEEeccCCCcEEEEeccCceEEEEeccCCCc-eEEEEEEecCCEEEEee----cCCeEEeeeecccceeee-ecCC
Confidence 99999999999999999999999999999999998 99999999866666655 899999999976554222 2233
Q ss_pred CCCceEEeEEeCCCCEEEEEEeCCCc-EEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 309 SSSGVLFPYYDHDTRILFLAGKGDGN-IRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 309 ~~~~v~~~~~~~~~~~l~~~g~~dg~-i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
......+++.+|.|..+ ++|+.|.. |.+|++++|+. ...+..| .+||.+++|+|.+..++++ |.++|+|++-.
T Consensus 434 ~p~QfscvavD~sGelV-~AG~~d~F~IfvWS~qTGql-lDiLsGH--EgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~ 509 (893)
T KOG0291|consen 434 EPIQFSCVAVDPSGELV-CAGAQDSFEIFVWSVQTGQL-LDILSGH--EGPVSGLSFSPDGSLLASGSWDKTVRIWDIFS 509 (893)
T ss_pred CceeeeEEEEcCCCCEE-EeeccceEEEEEEEeecCee-eehhcCC--CCcceeeEEccccCeEEeccccceEEEEEeec
Confidence 44566789999999998 67777765 99999999986 4556654 6899999999999999997 99999999988
Q ss_pred CCCeEEEeE
Q psy14130 386 TRNMCEPIS 394 (494)
Q Consensus 386 ~~~~~~~~~ 394 (494)
..+.++++.
T Consensus 510 s~~~vEtl~ 518 (893)
T KOG0291|consen 510 SSGTVETLE 518 (893)
T ss_pred cCceeeeEe
Confidence 666777765
|
|
| >KOG0318|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-27 Score=219.22 Aligned_cols=323 Identities=13% Similarity=0.197 Sum_probs=233.2
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccc-c--------ccCcccccccccceeecCCceEEEEEEE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGC-Y--------DNVPITRNAHDSHFCAANPKFVAVVTEV 73 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~-~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (494)
+-|+.-|+|+.|+| ||++++|+|.||++. +|+-.+..... . ..+.+...+....++.++.+..+.+|+.
T Consensus 187 r~HskFV~~VRysP-DG~~Fat~gsDgki~-iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdV 264 (603)
T KOG0318|consen 187 REHSKFVNCVRYSP-DGSRFATAGSDGKIY-IYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDV 264 (603)
T ss_pred cccccceeeEEECC-CCCeEEEecCCccEE-EEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEe
Confidence 67999999999999 899999999999998 77643322211 1 1122344555566666677777777776
Q ss_pred ecCceEEEEeccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEE
Q psy14130 74 AGGGAFLVLPIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKL 153 (494)
Q Consensus 74 ~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~i 153 (494)
..+..+.-+++. ... ....+-++|. .+..+.+.-.+.|.+
T Consensus 265 s~~slv~t~~~~------------------------------~~v--------~dqqvG~lWq--kd~lItVSl~G~in~ 304 (603)
T KOG0318|consen 265 STNSLVSTWPMG------------------------------STV--------EDQQVGCLWQ--KDHLITVSLSGTINY 304 (603)
T ss_pred eccceEEEeecC------------------------------Cch--------hceEEEEEEe--CCeEEEEEcCcEEEE
Confidence 554333322221 111 1122223332 233333444457999
Q ss_pred EEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeE-----------EEEecC-----
Q psy14130 154 WYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEA-----------LTVIDC----- 217 (494)
Q Consensus 154 w~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~-----------~~~~~~----- 217 (494)
++.... .++..+.||...|+++..+|++ ..|+||+.||.|.-||..++.. +..+..
T Consensus 305 ln~~d~-------~~~~~i~GHnK~ITaLtv~~d~-~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~ 376 (603)
T KOG0318|consen 305 LNPSDP-------SVLKVISGHNKSITALTVSPDG-KTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGE 376 (603)
T ss_pred ecccCC-------ChhheecccccceeEEEEcCCC-CEEEeeccCceEEEEecCCccccccccccccceEEEEeecCCCc
Confidence 998887 6778899999999999999999 7999999999999999854421 100000
Q ss_pred ----------------------C-------------------------------------------CCceEEEEEcCCCC
Q psy14130 218 ----------------------H-------------------------------------------PDVINCLSFNRDGS 232 (494)
Q Consensus 218 ----------------------h-------------------------------------------~~~v~~l~~~~~~~ 232 (494)
+ .-...+++++|+++
T Consensus 377 ~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~ 456 (603)
T KOG0318|consen 377 LFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGS 456 (603)
T ss_pred EEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcCCCC
Confidence 0 01246788899999
Q ss_pred EEEEEeCCCeEEEEeCCCCce--EEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCC
Q psy14130 233 RLVTTCKDKTVRVLDPRTGLV--ISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSS 310 (494)
Q Consensus 233 ~l~s~~~d~~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 310 (494)
.++.|+.|+.|++|.+..+.. ......|.+. ++.++|+|+ +.+|++| ...+.+.+||+.+... ......-|.
T Consensus 457 ~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~-iT~vaySpd-~~yla~~---Da~rkvv~yd~~s~~~-~~~~w~FHt 530 (603)
T KOG0318|consen 457 EVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAA-ITDVAYSPD-GAYLAAG---DASRKVVLYDVASREV-KTNRWAFHT 530 (603)
T ss_pred EEEEecccceEEEEEecCCcccceeeeecccCC-ceEEEECCC-CcEEEEe---ccCCcEEEEEcccCce-ecceeeeee
Confidence 999999999999999987663 3345678887 999999999 6777777 7899999999987554 222222377
Q ss_pred CceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec-cceeEEEEee
Q psy14130 311 SGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ-CEIFRFFKLH 384 (494)
Q Consensus 311 ~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~-~~~~~~~~l~ 384 (494)
..|.+++|+|+..++ ++|+.|..|.||++............|. ..|+.+.|.-+..++-++ |..+|+|.+.
T Consensus 531 akI~~~aWsP~n~~v-ATGSlDt~Viiysv~kP~~~i~iknAH~--~gVn~v~wlde~tvvSsG~Da~iK~W~v~ 602 (603)
T KOG0318|consen 531 AKINCVAWSPNNKLV-ATGSLDTNVIIYSVKKPAKHIIIKNAHL--GGVNSVAWLDESTVVSSGQDANIKVWNVT 602 (603)
T ss_pred eeEEEEEeCCCceEE-EeccccceEEEEEccChhhheEeccccc--cCceeEEEecCceEEeccCcceeEEeccc
Confidence 899999999999988 9999999999999998766555555554 349999999886666554 9999999864
|
|
| >KOG0319|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-29 Score=239.76 Aligned_cols=186 Identities=21% Similarity=0.365 Sum_probs=161.2
Q ss_pred CcEEEEEcCCCCCCCCc--ccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNL--NEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLS 226 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~--~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~ 226 (494)
.++++|+++..+..... .....+...|...|+|++.+|+. .++||||.|.+.+||++...+...++.+|...|.++.
T Consensus 434 ~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~nd-kLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~ 512 (775)
T KOG0319|consen 434 CTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPND-KLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVS 512 (775)
T ss_pred ceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCC-ceEEecccccceeeecccCceEEEEeeCCccceEEEE
Confidence 37999999873322110 01112446799999999999997 7999999999999999999999999999999999999
Q ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEee
Q psy14130 227 FNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALET 306 (494)
Q Consensus 227 ~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~ 306 (494)
|++..+.++|+|.|++|+||.+.+..++.++.+|... +.++.|..++..++++| .||.|++|++.+......+.
T Consensus 513 Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~a-Vlra~F~~~~~qliS~~----adGliKlWnikt~eC~~tlD- 586 (775)
T KOG0319|consen 513 FSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSA-VLRASFIRNGKQLISAG----ADGLIKLWNIKTNECEMTLD- 586 (775)
T ss_pred eccccceeEeccCCceEEEEEeccceeeeeecCccce-eEeeeeeeCCcEEEecc----CCCcEEEEeccchhhhhhhh-
Confidence 9999999999999999999999999999999999998 99999999988888888 89999999999877654443
Q ss_pred ecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCC
Q psy14130 307 VDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNE 343 (494)
Q Consensus 307 ~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~ 343 (494)
.|...|..++.+|.+.++ ++|+.||.|.+|.=.+.
T Consensus 587 -~H~DrvWaL~~~~~~~~~-~tgg~Dg~i~~wkD~Te 621 (775)
T KOG0319|consen 587 -AHNDRVWALSVSPLLDMF-VTGGGDGRIIFWKDVTE 621 (775)
T ss_pred -hccceeEEEeecCcccee-EecCCCeEEEEeecCcH
Confidence 366899999999999976 99999999999975443
|
|
| >KOG0285|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.5e-30 Score=223.88 Aligned_cols=301 Identities=16% Similarity=0.189 Sum_probs=224.1
Q ss_pred ceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEe
Q psy14130 168 WIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLD 247 (494)
Q Consensus 168 ~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd 247 (494)
..+.+.||.+.|.|+++.|.. .+++||+.|++++|||+.+|+...++.+|-..|..+++++-..++++++.|+.|+.||
T Consensus 143 l~rVi~gHlgWVr~vavdP~n-~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwD 221 (460)
T KOG0285|consen 143 LYRVISGHLGWVRSVAVDPGN-EWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWD 221 (460)
T ss_pred ehhhhhhccceEEEEeeCCCc-eeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEEEe
Confidence 346788999999999999997 7999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEE
Q psy14130 248 PRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFL 327 (494)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 327 (494)
+...+.++.+.+|-+. +.++..+|... ++++| +.|.++++||+|+......+ .+|...|..+.+.|-...+ +
T Consensus 222 Le~nkvIR~YhGHlS~-V~~L~lhPTld-vl~t~---grDst~RvWDiRtr~~V~~l--~GH~~~V~~V~~~~~dpqv-i 293 (460)
T KOG0285|consen 222 LEYNKVIRHYHGHLSG-VYCLDLHPTLD-VLVTG---GRDSTIRVWDIRTRASVHVL--SGHTNPVASVMCQPTDPQV-I 293 (460)
T ss_pred chhhhhHHHhccccce-eEEEeccccce-eEEec---CCcceEEEeeecccceEEEe--cCCCCcceeEEeecCCCce-E
Confidence 9999999999999998 99999998854 45555 59999999999985543332 3477899999999988888 8
Q ss_pred EEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec-cceeEEEEeeCCCCeEEEeEEEeeCC-CCCCC
Q psy14130 328 AGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ-CEIFRFFKLHTTRNMCEPISMIVPRK-SDQFQ 405 (494)
Q Consensus 328 ~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~pr~-~~~~~ 405 (494)
+|+.|++|++||++.++...... .+...+++++.+|+...++++ -..++-|++-.+ ..+..++-.-.-. ...-.
T Consensus 294 t~S~D~tvrlWDl~agkt~~tlt---~hkksvral~lhP~e~~fASas~dnik~w~~p~g-~f~~nlsgh~~iintl~~n 369 (460)
T KOG0285|consen 294 TGSHDSTVRLWDLRAGKTMITLT---HHKKSVRALCLHPKENLFASASPDNIKQWKLPEG-EFLQNLSGHNAIINTLSVN 369 (460)
T ss_pred EecCCceEEEeeeccCceeEeee---cccceeeEEecCCchhhhhccCCccceeccCCcc-chhhccccccceeeeeeec
Confidence 99999999999999998754443 235679999999999988886 678899998773 2344322110000 11122
Q ss_pred CCCCCCCCCCCcccCHhhhcCCCCCCCeEeccCCCCccccCC--CCcCCcccccccccccccccccc--cccccccceee
Q psy14130 406 DDLYPDTAAPVPALSAADWYKGVNRPPVLMSMRTGVNVCTHK--PKAFRPNEATRSDHNYKMKFAFL--NRETIPDYRPL 481 (494)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~w~~g~~~~~~~~sl~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 481 (494)
+|-+--+.+..-.+...+|.+|.|.+....-..|+......- ...|.++.+++-..++.+-|.+. +++..+..+|+
T Consensus 370 sD~v~~~G~dng~~~fwdwksg~nyQ~~~t~vqpGSl~sEagI~as~fDktg~rlit~eadKtIk~~keDe~aT~EthPl 449 (460)
T KOG0285|consen 370 SDGVLVSGGDNGSIMFWDWKSGHNYQRGQTIVQPGSLESEAGIFASCFDKTGSRLITGEADKTIKMYKEDEHATEETHPL 449 (460)
T ss_pred cCceEEEcCCceEEEEEecCcCcccccccccccCCccccccceeEEeecccCceEEeccCCcceEEEecccccCcccCCc
Confidence 233444555667778889999999876544456655432111 11223333333333344444433 34445555554
|
|
| >KOG0286|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-28 Score=208.35 Aligned_cols=177 Identities=24% Similarity=0.342 Sum_probs=155.8
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
.+..+||++++ +.+..+.||.+.|.++.++|...+.++||+.|+..++||++.+.++++|.+|+..|++++|.
T Consensus 166 ~TCalWDie~g-------~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghesDINsv~ff 238 (343)
T KOG0286|consen 166 MTCALWDIETG-------QQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHESDINSVRFF 238 (343)
T ss_pred ceEEEEEcccc-------eEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCcceeEeecccccccceEEEc
Confidence 47899999999 77889999999999999999434899999999999999999999999999999999999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceEEEeeecC-CCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHP-GTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV 307 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~ 307 (494)
|+|.-+++|+.|++.|+||+|..+.+..+.... ...+++++|+-. ++|+.+| ..|.++.+||.-..+....+ .
T Consensus 239 P~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~S-GRlLfag---y~d~~c~vWDtlk~e~vg~L--~ 312 (343)
T KOG0286|consen 239 PSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSKS-GRLLFAG---YDDFTCNVWDTLKGERVGVL--A 312 (343)
T ss_pred cCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEccc-ccEEEee---ecCCceeEeeccccceEEEe--e
Confidence 999999999999999999999999887776332 123789999887 7788888 48999999998765543333 3
Q ss_pred cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEE
Q psy14130 308 DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYE 339 (494)
Q Consensus 308 ~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd 339 (494)
+|.+.|.++..+|||.-+ ++|+-|..++||.
T Consensus 313 GHeNRvScl~~s~DG~av-~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 313 GHENRVSCLGVSPDGMAV-ATGSWDSTLRIWA 343 (343)
T ss_pred ccCCeeEEEEECCCCcEE-EecchhHheeecC
Confidence 578999999999999999 9999999999993
|
|
| >KOG0278|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=211.44 Aligned_cols=214 Identities=18% Similarity=0.292 Sum_probs=184.4
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe-EEEEecCCCCceEEEEEc
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE-ALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~-~~~~~~~h~~~v~~l~~~ 228 (494)
+.+|||.-++ ..++.+. |..-|.+++|+.+. +.|++|+.+..+||+|++..+ +...+.+|.+.|..+-|.
T Consensus 82 takvw~a~tg-------delhsf~-hkhivk~~af~~ds-~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc 152 (334)
T KOG0278|consen 82 TAKVWDAVTG-------DELHSFE-HKHIVKAVAFSQDS-NYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWC 152 (334)
T ss_pred hhhhhhhhhh-------hhhhhhh-hhheeeeEEecccc-hhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEe
Confidence 5799999988 6666666 99999999999997 799999999999999998654 567788999999999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD 308 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~ 308 (494)
...+.|++++.|++||+||.+++..++++..... +.++..+++ +++++.+ ..+.|.+||..+... +...+
T Consensus 153 ~eD~~iLSSadd~tVRLWD~rTgt~v~sL~~~s~--VtSlEvs~d-G~ilTia----~gssV~Fwdaksf~~---lKs~k 222 (334)
T KOG0278|consen 153 HEDKCILSSADDKTVRLWDHRTGTEVQSLEFNSP--VTSLEVSQD-GRILTIA----YGSSVKFWDAKSFGL---LKSYK 222 (334)
T ss_pred ccCceEEeeccCCceEEEEeccCcEEEEEecCCC--CcceeeccC-CCEEEEe----cCceeEEeccccccc---eeecc
Confidence 9999999999999999999999999999876544 788888888 7899988 578899999988765 33344
Q ss_pred CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 309 SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 309 ~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
....|.+...+|+...+ ++|++|..++.||..+++.+..+.. .+.+||.++.|+|+|...+++ |+++|+|..+.
T Consensus 223 ~P~nV~SASL~P~k~~f-VaGged~~~~kfDy~TgeEi~~~nk--gh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~ 298 (334)
T KOG0278|consen 223 MPCNVESASLHPKKEFF-VAGGEDFKVYKFDYNTGEEIGSYNK--GHFGPVHCVRFSPDGELYASGSEDGTIRLWQTTP 298 (334)
T ss_pred CccccccccccCCCceE-EecCcceEEEEEeccCCceeeeccc--CCCCceEEEEECCCCceeeccCCCceEEEEEecC
Confidence 56778899999998665 9999999999999999987555422 346899999999999999886 99999999877
|
|
| >KOG0296|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-27 Score=208.46 Aligned_cols=318 Identities=17% Similarity=0.250 Sum_probs=233.8
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccc-----cccCcccccccccce-eecCCceEEEEEEEecC
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGC-----YDNVPITRNAHDSHF-CAANPKFVAVVTEVAGG 76 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 76 (494)
.+|+++|.+++.+| +.++++|||.|.... +|++......+ .+.+.-....++..+ ...+-.+.+.+|..+.+
T Consensus 61 ~~H~~svFavsl~P-~~~l~aTGGgDD~Af-lW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg 138 (399)
T KOG0296|consen 61 DKHTDSVFAVSLHP-NNNLVATGGGDDLAF-LWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTG 138 (399)
T ss_pred hhcCCceEEEEeCC-CCceEEecCCCceEE-EEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccC
Confidence 58999999999999 899999999999887 89876654211 001111111122222 22233334444443333
Q ss_pred ceEEEEeccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEc
Q psy14130 77 GAFLVLPIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYI 156 (494)
Q Consensus 77 g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~ 156 (494)
+.... +.....++.++.|+|....++..+. +| .+-+|.+
T Consensus 139 ~~~~~--------------------------------~~~e~~dieWl~WHp~a~illAG~~-DG--------svWmw~i 177 (399)
T KOG0296|consen 139 GEQWK--------------------------------LDQEVEDIEWLKWHPRAHILLAGST-DG--------SVWMWQI 177 (399)
T ss_pred ceEEE--------------------------------eecccCceEEEEecccccEEEeecC-CC--------cEEEEEC
Confidence 22221 1133467889999996655555443 33 6999999
Q ss_pred CCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCC-CCceEEEEEcCCCCEEE
Q psy14130 157 PDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCH-PDVINCLSFNRDGSRLV 235 (494)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h-~~~v~~l~~~~~~~~l~ 235 (494)
++. ...+.+.||..++++=.|.|+| ..++++..||+|++||+.+++++..+.+- .....++.++..+..++
T Consensus 178 p~~-------~~~kv~~Gh~~~ct~G~f~pdG-Kr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~ 249 (399)
T KOG0296|consen 178 PSQ-------ALCKVMSGHNSPCTCGEFIPDG-KRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLT 249 (399)
T ss_pred CCc-------ceeeEecCCCCCcccccccCCC-ceEEEEecCceEEEEecCCCceeEEecccccCcCCccccccccceeE
Confidence 987 4567889999999999999998 79999999999999999999999888742 34567889999999999
Q ss_pred EEeCCCeEEEEeCCCCceEEEeee--------cCCCCceEEEEECCC--CeEEEEEecCCCCceEEEEeCCCCCCceeEe
Q psy14130 236 TTCKDKTVRVLDPRTGLVISQGVC--------HPGTRSSKAVFIGDT--GRIVTTGFSRHSDRQVGLWDENDLNTPLALE 305 (494)
Q Consensus 236 s~~~d~~v~iwd~~~~~~~~~~~~--------~~~~~~~~~~~~~~~--~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~ 305 (494)
+|+.++.+++-+..+|+.+....+ +... +.++.+.|.. =.|+++| +-||+|.|||+..... ..
T Consensus 250 ~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~-~esve~~~~ss~lpL~A~G---~vdG~i~iyD~a~~~~---R~ 322 (399)
T KOG0296|consen 250 KGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEEL-DESVESIPSSSKLPLAACG---SVDGTIAIYDLAASTL---RH 322 (399)
T ss_pred eccCCccEEEEccccceEEEecCCCCccccccchhh-hhhhhhcccccccchhhcc---cccceEEEEecccchh---he
Confidence 999999999999999987766652 2222 3444444432 3588999 8999999999876443 22
Q ss_pred eecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEe
Q psy14130 306 TVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKL 383 (494)
Q Consensus 306 ~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l 383 (494)
...|..+|+.+.|.+ ..+| ++++.+|.|+.||.++|+.+..+.. |..+|..++.+|+..++++. |...++|+.
T Consensus 323 ~c~he~~V~~l~w~~-t~~l-~t~c~~g~v~~wDaRtG~l~~~y~G---H~~~Il~f~ls~~~~~vvT~s~D~~a~VF~v 397 (399)
T KOG0296|consen 323 ICEHEDGVTKLKWLN-TDYL-LTACANGKVRQWDARTGQLKFTYTG---HQMGILDFALSPQKRLVVTVSDDNTALVFEV 397 (399)
T ss_pred eccCCCceEEEEEcC-cchh-eeeccCceEEeeeccccceEEEEec---CchheeEEEEcCCCcEEEEecCCCeEEEEec
Confidence 345778899999998 7777 7888999999999999998666543 35789999999999988774 888898875
|
|
| >KOG0313|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.5e-28 Score=212.66 Aligned_cols=220 Identities=17% Similarity=0.307 Sum_probs=180.8
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECC---------------------
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVG--------------------- 207 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~--------------------- 207 (494)
.++++|.++.+.... +.+..-.||.+.|-+++..++| ..+++||.|.+|+||+..
T Consensus 169 qtl~Lw~~~~~~~~~---~~~~~~~GHk~~V~sVsv~~sg-tr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~ 244 (423)
T KOG0313|consen 169 QTLRLWKWNVGENKV---KALKVCRGHKRSVDSVSVDSSG-TRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKRE 244 (423)
T ss_pred ceEEEEEecCchhhh---hHHhHhcccccceeEEEecCCC-CeEEeecccceeeecccCCCccccccccchhhhhhhhhh
Confidence 369999988775432 3444556999999999999998 799999999999999931
Q ss_pred ----CCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEec
Q psy14130 208 ----KGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFS 283 (494)
Q Consensus 208 ----~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 283 (494)
++.++.++.+|.++|.++.|++ ...+++++.|-+|+.||+.++..+.++.+... ..++.+++. ..++++|
T Consensus 245 ~~~~~r~P~vtl~GHt~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~~~~~~~~ks--l~~i~~~~~-~~Ll~~g-- 318 (423)
T KOG0313|consen 245 KEGGTRTPLVTLEGHTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGLKSTLTTNKS--LNCISYSPL-SKLLASG-- 318 (423)
T ss_pred hcccccCceEEecccccceeeEEEcC-CCceEeecccceEEEEEeecccceeeeecCcc--eeEeecccc-cceeeec--
Confidence 1235678899999999999998 67899999999999999999999888877655 688899986 7888999
Q ss_pred CCCCceEEEEeCCCCCCceeE-eeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCC-ceEEecccccCCCCeeE
Q psy14130 284 RHSDRQVGLWDENDLNTPLAL-ETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNER-PYIHFLNQSLSGAPQRG 361 (494)
Q Consensus 284 ~~~d~~i~iwd~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~-~~~~~~~~~~~~~~v~~ 361 (494)
+.|+.|++||.|++.-.... ...+|.+-|..+.|+|...++|++|+.|+++++||+++.+ ++..+. . +...|.+
T Consensus 319 -ssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~-~--h~DKvl~ 394 (423)
T KOG0313|consen 319 -SSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIA-G--HNDKVLS 394 (423)
T ss_pred -CCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeec-c--CCceEEE
Confidence 89999999999986544433 3456778899999999999999999999999999999987 554443 2 3788999
Q ss_pred EEEecCCceeeec--cceeEEEEe
Q psy14130 362 LGFMPKRGCDVTQ--CEIFRFFKL 383 (494)
Q Consensus 362 ~~~~p~~~~~~~~--~~~~~~~~l 383 (494)
+.|... ..++++ |..+|+++-
T Consensus 395 vdW~~~-~~IvSGGaD~~l~i~~~ 417 (423)
T KOG0313|consen 395 VDWNEG-GLIVSGGADNKLRIFKG 417 (423)
T ss_pred EeccCC-ceEEeccCcceEEEecc
Confidence 999865 344553 889998864
|
|
| >KOG0282|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.9e-29 Score=227.35 Aligned_cols=217 Identities=18% Similarity=0.299 Sum_probs=169.9
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcC
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNR 229 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~ 229 (494)
.|++||+++| .++..+. -...++|+.|+|++.+.+++|+.|+.|+.||+++++.++.+..|-+.|..+.|-+
T Consensus 281 ~lKlwDtETG-------~~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~ 352 (503)
T KOG0282|consen 281 FLKLWDTETG-------QVLSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVD 352 (503)
T ss_pred eeeeeccccc-------eEEEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEcc
Confidence 6999999999 5555554 3456799999999988999999999999999999999999999999999999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCC---ceeEee
Q psy14130 230 DGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNT---PLALET 306 (494)
Q Consensus 230 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~---~~~~~~ 306 (494)
+|+++++++.|+.++||+.+.+..+.....+.....-++..+|+++.+++ - +.|..|.+|.+...-. ...+..
T Consensus 353 ~g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~a-Q---s~dN~i~ifs~~~~~r~nkkK~feG 428 (503)
T KOG0282|consen 353 EGRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAA-Q---SMDNYIAIFSTVPPFRLNKKKRFEG 428 (503)
T ss_pred CCceEeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehh-h---ccCceEEEEecccccccCHhhhhcc
Confidence 99999999999999999999887665554433332456777888555444 4 4899999998653221 112222
Q ss_pred ecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCc-eeee-c-cceeEEEE
Q psy14130 307 VDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRG-CDVT-Q-CEIFRFFK 382 (494)
Q Consensus 307 ~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~-~~~~-~-~~~~~~~~ 382 (494)
....+....+.|||||++| ++|+.||.+.+||.++-+.+..+ .. +..++.++.|+|... .+++ + +|.|++|+
T Consensus 429 h~vaGys~~v~fSpDG~~l-~SGdsdG~v~~wdwkt~kl~~~l-ka--h~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 429 HSVAGYSCQVDFSPDGRTL-CSGDSDGKVNFWDWKTTKLVSKL-KA--HDQPCIGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred eeccCceeeEEEcCCCCeE-EeecCCccEEEeechhhhhhhcc-cc--CCcceEEEEecCCCcceeEecccCceeEecC
Confidence 2233556678999999999 99999999999999998764332 22 368899999999644 3333 3 89999995
|
|
| >KOG0264|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.5e-28 Score=219.94 Aligned_cols=268 Identities=17% Similarity=0.266 Sum_probs=211.5
Q ss_pred ccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEEe
Q psy14130 4 LYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLP 83 (494)
Q Consensus 4 gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~ 83 (494)
-|.+.|+.+.+.|.++.++||++..+.|. ||+........ ...+
T Consensus 122 ~h~gEVnRaRymPQnp~iVAt~t~~~dv~-Vfd~tk~~s~~-----~~~~------------------------------ 165 (422)
T KOG0264|consen 122 NHDGEVNRARYMPQNPNIVATKTSSGDVY-VFDYTKHPSKP-----KASG------------------------------ 165 (422)
T ss_pred cCCccchhhhhCCCCCcEEEecCCCCCEE-EEEeccCCCcc-----cccc------------------------------
Confidence 38899999999999999999999999997 88764322110 0000
Q ss_pred ccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCCC
Q psy14130 84 IHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLSG 163 (494)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~~ 163 (494)
.+..++++......+.-+.||+.......+++.++ +|++||+.......
T Consensus 166 -----------------------~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~--------~i~lwdi~~~~~~~ 214 (422)
T KOG0264|consen 166 -----------------------ECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDH--------TICLWDINAESKED 214 (422)
T ss_pred -----------------------cCCCceEEEeecccccccccccccceeEeeccCCC--------cEEEEeccccccCC
Confidence 00122222222223444566666555555555554 79999998876654
Q ss_pred CcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECC--CCeEEEEecCCCCceEEEEEcC-CCCEEEEEeCC
Q psy14130 164 NLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVG--KGEALTVIDCHPDVINCLSFNR-DGSRLVTTCKD 240 (494)
Q Consensus 164 ~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~--~~~~~~~~~~h~~~v~~l~~~~-~~~~l~s~~~d 240 (494)
....+...+.+|...|..++|++..+.++++++.|+.+.|||++ +.++.....+|.+.|.|++|+| ++..|||||.|
T Consensus 215 ~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D 294 (422)
T KOG0264|consen 215 KVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSAD 294 (422)
T ss_pred ccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCC
Confidence 44577788999999999999999988999999999999999999 5566777889999999999999 67789999999
Q ss_pred CeEEEEeCCCCc-eEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCc------------eeEeee
Q psy14130 241 KTVRVLDPRTGL-VISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTP------------LALETV 307 (494)
Q Consensus 241 ~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~------------~~~~~~ 307 (494)
++|++||+|+-. ++.++.+|... +.++.|+|....+++++ +.|+.+.+||+...... +.+...
T Consensus 295 ~tV~LwDlRnL~~~lh~~e~H~de-v~~V~WSPh~etvLASS---g~D~rl~vWDls~ig~eq~~eda~dgppEllF~Hg 370 (422)
T KOG0264|consen 295 KTVALWDLRNLNKPLHTFEGHEDE-VFQVEWSPHNETVLASS---GTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHG 370 (422)
T ss_pred CcEEEeechhcccCceeccCCCcc-eEEEEeCCCCCceeEec---ccCCcEEEEeccccccccChhhhccCCcceeEEec
Confidence 999999999875 78899999998 99999999999999998 89999999998753322 123444
Q ss_pred cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeC
Q psy14130 308 DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTN 342 (494)
Q Consensus 308 ~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~ 342 (494)
+|...|..+.|+|+..+++++.+.|+.+.||.+..
T Consensus 371 GH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s~ 405 (422)
T KOG0264|consen 371 GHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMAE 405 (422)
T ss_pred CcccccccccCCCCCCeEEEEecCCceEEEeeccc
Confidence 66788999999999999999999999999999874
|
|
| >KOG0295|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=216.67 Aligned_cols=238 Identities=16% Similarity=0.253 Sum_probs=195.9
Q ss_pred CCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCe
Q psy14130 121 SHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYL 200 (494)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~ 200 (494)
+....+.|....++.. +.+ .+|++||..++ +....++||.+.|..++|+..| .+||+++.|-.
T Consensus 111 vt~v~~hp~~~~v~~a-s~d--------~tikv~D~~tg-------~~e~~LrGHt~sv~di~~~a~G-k~l~tcSsDl~ 173 (406)
T KOG0295|consen 111 VTRVIFHPSEALVVSA-SED--------ATIKVFDTETG-------ELERSLRGHTDSVFDISFDASG-KYLATCSSDLS 173 (406)
T ss_pred eeeeeeccCceEEEEe-cCC--------ceEEEEEccch-------hhhhhhhccccceeEEEEecCc-cEEEecCCccc
Confidence 3444455655444443 233 37999999999 6677899999999999999999 79999999999
Q ss_pred EEEEECCC-CeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEE
Q psy14130 201 IILWDVGK-GEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVT 279 (494)
Q Consensus 201 v~iwd~~~-~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 279 (494)
+++||..+ .+++..+.+|+..|.+++|-|.|.+|+|++.|.+|+.||+.+|-++.++.+|... +..+..+. ++.|++
T Consensus 174 ~~LWd~~~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~~h~ew-vr~v~v~~-DGti~A 251 (406)
T KOG0295|consen 174 AKLWDFDTFFRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFPGHSEW-VRMVRVNQ-DGTIIA 251 (406)
T ss_pred hhheeHHHHHHHHHHhcCcccceeeEEEEecCCeeeecccccceeEEecccceeEEeccCchHh-EEEEEecC-CeeEEE
Confidence 99999977 4677888899999999999999999999999999999999999999999999985 44444444 489999
Q ss_pred EEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCC--------------CEEEEEEeCCCcEEEEEeeCCCc
Q psy14130 280 TGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDT--------------RILFLAGKGDGNIRYYELTNERP 345 (494)
Q Consensus 280 ~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~--------------~~l~~~g~~dg~i~~wd~~~~~~ 345 (494)
++ +.|.+|++|-+.+......+.. |...|.+++|.|.. ..++++++.|++|++||+.++.+
T Consensus 252 s~---s~dqtl~vW~~~t~~~k~~lR~--hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~c 326 (406)
T KOG0295|consen 252 SC---SNDQTLRVWVVATKQCKAELRE--HEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMC 326 (406)
T ss_pred ec---CCCceEEEEEeccchhhhhhhc--cccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeE
Confidence 99 8999999999987644433333 45567777776631 23449999999999999999998
Q ss_pred eEEecccccCCCCeeEEEEecCCceeee--ccceeEEEEeeC
Q psy14130 346 YIHFLNQSLSGAPQRGLGFMPKRGCDVT--QCEIFRFFKLHT 385 (494)
Q Consensus 346 ~~~~~~~~~~~~~v~~~~~~p~~~~~~~--~~~~~~~~~l~~ 385 (494)
+.++..+ .+-|++++|+|.|.++++ .|+++|+|++.+
T Consensus 327 L~tL~gh---dnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~ 365 (406)
T KOG0295|consen 327 LFTLVGH---DNWVRGVAFSPGGKYILSCADDKTLRVWDLKN 365 (406)
T ss_pred EEEEecc---cceeeeeEEcCCCeEEEEEecCCcEEEEEecc
Confidence 7776543 678999999999999887 499999999998
|
|
| >KOG0292|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-27 Score=232.27 Aligned_cols=219 Identities=21% Similarity=0.264 Sum_probs=187.7
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcC
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNR 229 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~ 229 (494)
+|++|+..+. .++.+|.||-+.|..+.||+.- -+++|+|.|.+|+||+.++++++..+.||...|.|.+|+|
T Consensus 74 kIkVWnYk~r-------rclftL~GHlDYVRt~~FHhey-PWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhp 145 (1202)
T KOG0292|consen 74 KIKVWNYKTR-------RCLFTLLGHLDYVRTVFFHHEY-PWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHP 145 (1202)
T ss_pred EEEEEecccc-------eehhhhccccceeEEeeccCCC-ceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCC
Confidence 6999999998 8889999999999999999998 5999999999999999999999999999999999999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCC---------------------------c--eEEEeeecCCCCceEEEEECCCCeEEEE
Q psy14130 230 DGSRLVTTCKDKTVRVLDPRTG---------------------------L--VISQGVCHPGTRSSKAVFIGDTGRIVTT 280 (494)
Q Consensus 230 ~~~~l~s~~~d~~v~iwd~~~~---------------------------~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 280 (494)
...+++|+|-|.+||+||+..- . ..+.+.+|... ++-++|+|. --++++
T Consensus 146 tEDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRG-VNwaAfhpT-lpliVS 223 (1202)
T KOG0292|consen 146 TEDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRG-VNWAAFHPT-LPLIVS 223 (1202)
T ss_pred ccceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccc-cceEEecCC-cceEEe
Confidence 9999999999999999997421 0 22446788887 899999997 457777
Q ss_pred EecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCee
Q psy14130 281 GFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQR 360 (494)
Q Consensus 281 g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~ 360 (494)
| ++|+.|++|.+...+.-..-...+|.+.|.++.|+|....+ ++.++|++|++||+...+.+..+... .+..+
T Consensus 224 G---~DDRqVKlWrmnetKaWEvDtcrgH~nnVssvlfhp~q~lI-lSnsEDksirVwDm~kRt~v~tfrre---ndRFW 296 (1202)
T KOG0292|consen 224 G---ADDRQVKLWRMNETKAWEVDTCRGHYNNVSSVLFHPHQDLI-LSNSEDKSIRVWDMTKRTSVQTFRRE---NDRFW 296 (1202)
T ss_pred c---CCcceeeEEEeccccceeehhhhcccCCcceEEecCcccee-EecCCCccEEEEecccccceeeeecc---CCeEE
Confidence 7 69999999998754332222233577899999999998888 89999999999999998877666443 46799
Q ss_pred EEEEecCCceeeec-cceeEEEEeeC
Q psy14130 361 GLGFMPKRGCDVTQ-CEIFRFFKLHT 385 (494)
Q Consensus 361 ~~~~~p~~~~~~~~-~~~~~~~~l~~ 385 (494)
.++-+|...+++.+ |+-+-+|++..
T Consensus 297 ~laahP~lNLfAAgHDsGm~VFkleR 322 (1202)
T KOG0292|consen 297 ILAAHPELNLFAAGHDSGMIVFKLER 322 (1202)
T ss_pred EEEecCCcceeeeecCCceEEEEEcc
Confidence 99999999999887 88888999885
|
|
| >KOG0281|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.3e-29 Score=216.91 Aligned_cols=212 Identities=19% Similarity=0.254 Sum_probs=172.9
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe---EEEEecCCCCceEEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE---ALTVIDCHPDVINCLS 226 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~---~~~~~~~h~~~v~~l~ 226 (494)
+|++||..++ +++.++-+|...|..+.|+. .+++|+|.|.++.+||+.... +.+.+.||...|+.+.
T Consensus 258 TvrvWDv~tg-------e~l~tlihHceaVLhlrf~n---g~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVd 327 (499)
T KOG0281|consen 258 TVRVWDVNTG-------EPLNTLIHHCEAVLHLRFSN---GYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVD 327 (499)
T ss_pred eEEEEeccCC-------chhhHHhhhcceeEEEEEeC---CEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeec
Confidence 7999999999 88889999999999999994 489999999999999997654 3345779999999999
Q ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEee
Q psy14130 227 FNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALET 306 (494)
Q Consensus 227 ~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~ 306 (494)
|+ .+++++++.|++|++|++.+++.++++.+|... +.++.+ .++++++| ++|.+|++||+..+.....++
T Consensus 328 fd--~kyIVsASgDRTikvW~~st~efvRtl~gHkRG-IAClQY---r~rlvVSG---SSDntIRlwdi~~G~cLRvLe- 397 (499)
T KOG0281|consen 328 FD--DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRG-IACLQY---RDRLVVSG---SSDNTIRLWDIECGACLRVLE- 397 (499)
T ss_pred cc--cceEEEecCCceEEEEeccceeeehhhhccccc-ceehhc---cCeEEEec---CCCceEEEEeccccHHHHHHh-
Confidence 96 569999999999999999999999999999877 666655 37899999 999999999999876644443
Q ss_pred ecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEec------ccccCCCCeeEEEEecCCceeeeccceeEE
Q psy14130 307 VDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFL------NQSLSGAPQRGLGFMPKRGCDVTQCEIFRF 380 (494)
Q Consensus 307 ~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~------~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~ 380 (494)
+|..-|.++.| |.+.+ ++|+.||+|++||+.++....... ....+.+.|-.+.|..-.....+-|.++-+
T Consensus 398 -GHEeLvRciRF--d~krI-VSGaYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQFD~fqIvsssHddtILi 473 (499)
T KOG0281|consen 398 -GHEELVRCIRF--DNKRI-VSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILI 473 (499)
T ss_pred -chHHhhhheee--cCcee-eeccccceEEEEecccccCCcccccchHHHhhhhccceeEEEeecceEEEeccCCCeEEE
Confidence 25566888888 45667 999999999999998875321111 122356678888887655444455999999
Q ss_pred EEeeC
Q psy14130 381 FKLHT 385 (494)
Q Consensus 381 ~~l~~ 385 (494)
|++..
T Consensus 474 WdFl~ 478 (499)
T KOG0281|consen 474 WDFLN 478 (499)
T ss_pred EEcCC
Confidence 99876
|
|
| >KOG1446|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-26 Score=199.41 Aligned_cols=220 Identities=16% Similarity=0.262 Sum_probs=178.4
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
.+|+..++.+. +.++.+.||...|++++.+|-+ ..++|++.|++|++||++..++...+..... ..++|+
T Consensus 80 ~tIryLsl~dN-------kylRYF~GH~~~V~sL~~sP~~-d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~--pi~AfD 149 (311)
T KOG1446|consen 80 DTIRYLSLHDN-------KYLRYFPGHKKRVNSLSVSPKD-DTFLSSSLDKTVRLWDLRVKKCQGLLNLSGR--PIAAFD 149 (311)
T ss_pred CceEEEEeecC-------ceEEEcCCCCceEEEEEecCCC-CeEEecccCCeEEeeEecCCCCceEEecCCC--cceeEC
Confidence 36999999998 8899999999999999999998 6999999999999999998777666543333 357899
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCc--eEEEeee--cCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeE
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGL--VISQGVC--HPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLAL 304 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~ 304 (494)
|+|-++|++...+.|++||+|.-. +..++.. ........+.|+|+|..++.+. ..+.+++.|.-++.....+
T Consensus 150 p~GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT----~~s~~~~lDAf~G~~~~tf 225 (311)
T KOG1446|consen 150 PEGLIFALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLST----NASFIYLLDAFDGTVKSTF 225 (311)
T ss_pred CCCcEEEEecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEe----CCCcEEEEEccCCcEeeeE
Confidence 999999999988899999999752 3344332 2333478999999987777776 7889999998877654444
Q ss_pred eeecCCC-ceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccceeEEEEe
Q psy14130 305 ETVDSSS-GVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKL 383 (494)
Q Consensus 305 ~~~~~~~-~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l 383 (494)
....... -.....|+||++++ ++|+.||+|.+|++++++.+..+... +..++.++.|+|....+++++..+-+|-.
T Consensus 226 s~~~~~~~~~~~a~ftPds~Fv-l~gs~dg~i~vw~~~tg~~v~~~~~~--~~~~~~~~~fnP~~~mf~sa~s~l~fw~p 302 (311)
T KOG1446|consen 226 SGYPNAGNLPLSATFTPDSKFV-LSGSDDGTIHVWNLETGKKVAVLRGP--NGGPVSCVRFNPRYAMFVSASSNLVFWLP 302 (311)
T ss_pred eeccCCCCcceeEEECCCCcEE-EEecCCCcEEEEEcCCCcEeeEecCC--CCCCccccccCCceeeeeecCceEEEEec
Confidence 4433322 23578999999999 99999999999999999886555443 46789999999999999999999999987
Q ss_pred eC
Q psy14130 384 HT 385 (494)
Q Consensus 384 ~~ 385 (494)
..
T Consensus 303 ~~ 304 (311)
T KOG1446|consen 303 DE 304 (311)
T ss_pred cc
Confidence 65
|
|
| >KOG0276|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-27 Score=222.56 Aligned_cols=218 Identities=18% Similarity=0.239 Sum_probs=182.7
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC-eEEEEecCCCCceEEEEEc
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKG-EALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~-~~~~~~~~h~~~v~~l~~~ 228 (494)
+|+||+..+. +.+..+.+|.+.|.|++.||+. -+++|+|.|-+|++||.+.. .+.+++++|...|.+++|+
T Consensus 78 ~IrVfnynt~-------ekV~~FeAH~DyIR~iavHPt~-P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fn 149 (794)
T KOG0276|consen 78 QIRVFNYNTG-------EKVKTFEAHSDYIRSIAVHPTL-PYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFN 149 (794)
T ss_pred eEEEEecccc-------eeeEEeeccccceeeeeecCCC-CeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEec
Confidence 6999999999 8889999999999999999998 59999999999999999865 5788999999999999999
Q ss_pred C-CCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCC-CeEEEEEecCCCCceEEEEeCCCCCCceeEee
Q psy14130 229 R-DGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDT-GRIVTTGFSRHSDRQVGLWDENDLNTPLALET 306 (494)
Q Consensus 229 ~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~ 306 (494)
| |.+.++|+|-|++|++|.+.+..+..++.+|... ++++.|.+-+ .-.+.+| ++|.+|+|||..+..+..++.
T Consensus 150 PkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekG-VN~Vdyy~~gdkpylIsg---aDD~tiKvWDyQtk~CV~TLe- 224 (794)
T KOG0276|consen 150 PKDPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKG-VNCVDYYTGGDKPYLISG---ADDLTIKVWDYQTKSCVQTLE- 224 (794)
T ss_pred CCCccceeeeeccccEEEEEcCCCCCceeeeccccC-cceEEeccCCCcceEEec---CCCceEEEeecchHHHHHHhh-
Confidence 9 6789999999999999999999999999999998 9999988753 3356666 699999999998765543333
Q ss_pred ecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec-cceeEEEEeeC
Q psy14130 307 VDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ-CEIFRFFKLHT 385 (494)
Q Consensus 307 ~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~-~~~~~~~~l~~ 385 (494)
+|...|..+.|+|.-..+ ++|++||+++||+..+=+....+ . -....+++++-.++...++.+ |+-.-+.++-.
T Consensus 225 -GHt~Nvs~v~fhp~lpii-isgsEDGTvriWhs~Ty~lE~tL-n--~gleRvW~I~~~k~~~~i~vG~Deg~i~v~lgr 299 (794)
T KOG0276|consen 225 -GHTNNVSFVFFHPELPII-ISGSEDGTVRIWNSKTYKLEKTL-N--YGLERVWCIAAHKGDGKIAVGFDEGSVTVKLGR 299 (794)
T ss_pred -cccccceEEEecCCCcEE-EEecCCccEEEecCcceehhhhh-h--cCCceEEEEeecCCCCeEEEeccCCcEEEEccC
Confidence 366889999999998888 99999999999998875432111 1 124679999988877666665 77666666655
|
|
| >KOG0266|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-27 Score=233.93 Aligned_cols=226 Identities=19% Similarity=0.293 Sum_probs=185.1
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEEC-CCCeEEEEecCCCCceEEEE
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDV-GKGEALTVIDCHPDVINCLS 226 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~-~~~~~~~~~~~h~~~v~~l~ 226 (494)
.+.+++|+...... .....+.+|...|.+++|+|++ .++++++.|++|++||+ ..+..++++.+|...|++++
T Consensus 180 ~~~i~~~~~~~~~~-----~~~~~l~~h~~~v~~~~fs~d~-~~l~s~s~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~ 253 (456)
T KOG0266|consen 180 DGLIRIWKLEGIKS-----NLLRELSGHTRGVSDVAFSPDG-SYLLSGSDDKTLRIWDLKDDGRNLKTLKGHSTYVTSVA 253 (456)
T ss_pred CCcEEEeecccccc-----hhhccccccccceeeeEECCCC-cEEEEecCCceEEEeeccCCCeEEEEecCCCCceEEEE
Confidence 44799999966521 2456668999999999999998 69999999999999999 55689999999999999999
Q ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCc--eeE
Q psy14130 227 FNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTP--LAL 304 (494)
Q Consensus 227 ~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~--~~~ 304 (494)
|+|+|+++++|+.|++|+|||+++++++..+.+|.+. ++.++|.++ +.+++++ +.|+.|++||+.++... ...
T Consensus 254 f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~-is~~~f~~d-~~~l~s~---s~d~~i~vwd~~~~~~~~~~~~ 328 (456)
T KOG0266|consen 254 FSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDG-ISGLAFSPD-GNLLVSA---SYDGTIRVWDLETGSKLCLKLL 328 (456)
T ss_pred ecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCc-eEEEEECCC-CCEEEEc---CCCccEEEEECCCCceeeeecc
Confidence 9999999999999999999999999999999999997 999999988 5566666 58999999999987632 122
Q ss_pred eeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEE
Q psy14130 305 ETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFK 382 (494)
Q Consensus 305 ~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~ 382 (494)
........+.++.|+|++.++ +++..|+.+++||+..++....+.........+.+...++.+.+++++ |..+.+|+
T Consensus 329 ~~~~~~~~~~~~~fsp~~~~l-l~~~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~~v~~~~ 407 (456)
T KOG0266|consen 329 SGAENSAPVTSVQFSPNGKYL-LSASLDRTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGGKLIYSGSEDGSVYVWD 407 (456)
T ss_pred cCCCCCCceeEEEECCCCcEE-EEecCCCeEEEEEccCCcceeeecccCCcceeEecccccCCCCeEEEEeCCceEEEEe
Confidence 211111168999999999999 888899999999999988755544332211245555667888888876 99999999
Q ss_pred eeC
Q psy14130 383 LHT 385 (494)
Q Consensus 383 l~~ 385 (494)
+.+
T Consensus 408 ~~s 410 (456)
T KOG0266|consen 408 SSS 410 (456)
T ss_pred CCc
Confidence 887
|
|
| >KOG0277|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.4e-28 Score=203.21 Aligned_cols=255 Identities=17% Similarity=0.205 Sum_probs=200.3
Q ss_pred CCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCC
Q psy14130 120 DSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDY 199 (494)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~ 199 (494)
...+.++-++.++++... .+...+.+++.|.++...+-+ .....+. -.+.+..++|++..++++++++.||
T Consensus 13 svqfSPf~~nrLavAt~q----~yGl~G~G~L~ile~~~~~gi----~e~~s~d-~~D~LfdV~Wse~~e~~~~~a~GDG 83 (311)
T KOG0277|consen 13 SVQFSPFVENRLAVATAQ----HYGLAGNGRLFILEVTDPKGI----QECQSYD-TEDGLFDVAWSENHENQVIAASGDG 83 (311)
T ss_pred eeEecccccchhheeehh----hcccccCceEEEEecCCCCCe----EEEEeee-cccceeEeeecCCCcceEEEEecCc
Confidence 345555666667766543 233444457888888644221 2222232 4678999999999999999999999
Q ss_pred eEEEEECCC-CeEEEEecCCCCceEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeE
Q psy14130 200 LIILWDVGK-GEALTVIDCHPDVINCLSFNR-DGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRI 277 (494)
Q Consensus 200 ~v~iwd~~~-~~~~~~~~~h~~~v~~l~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 277 (494)
++++||+.. ..++..++.|...|.++.|++ ++..++++|.|++|++||+..++.++++.+|... +...+|+|....+
T Consensus 84 SLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~-Iy~a~~sp~~~nl 162 (311)
T KOG0277|consen 84 SLRLFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSC-IYQAAFSPHIPNL 162 (311)
T ss_pred eEEEeccCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccE-EEEEecCCCCCCe
Confidence 999999653 358889999999999999999 5667888899999999999999999999999988 9999999999999
Q ss_pred EEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCC
Q psy14130 278 VTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGA 357 (494)
Q Consensus 278 ~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~ 357 (494)
+++. +.|+.+++||++.......+. .|...++++.|+.-...+++||+.|+.|+.||+++-+.....+. .++-
T Consensus 163 fas~---Sgd~~l~lwdvr~~gk~~~i~--ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~--gh~~ 235 (311)
T KOG0277|consen 163 FASA---SGDGTLRLWDVRSPGKFMSIE--AHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELN--GHGL 235 (311)
T ss_pred EEEc---cCCceEEEEEecCCCceeEEE--eccceeEeecccccCCcEEEecCCCceEEEEehhhccccceeec--CCce
Confidence 9999 899999999999776655533 25579999999998888889999999999999998653333333 3467
Q ss_pred CeeEEEEecCCc-eeeec--cceeEEEEeeCCCCeEE
Q psy14130 358 PQRGLGFMPKRG-CDVTQ--CEIFRFFKLHTTRNMCE 391 (494)
Q Consensus 358 ~v~~~~~~p~~~-~~~~~--~~~~~~~~l~~~~~~~~ 391 (494)
.|+.+.|+|-.. ++++. |-+.|||+.......++
T Consensus 236 AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds~~e 272 (311)
T KOG0277|consen 236 AVRKVKFSPHHASLLASASYDMTVRIWDPERQDSAIE 272 (311)
T ss_pred EEEEEecCcchhhHhhhccccceEEecccccchhhhh
Confidence 899999999654 44443 89999999986454444
|
|
| >KOG0772|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-27 Score=219.15 Aligned_cols=298 Identities=17% Similarity=0.245 Sum_probs=208.0
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 82 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~ 82 (494)
+||+..|.++++.| .|.+|+|||.|.+|+ .|+........ ..
T Consensus 164 ~hgtk~Vsal~~Dp-~GaR~~sGs~Dy~v~-~wDf~gMdas~-~~----------------------------------- 205 (641)
T KOG0772|consen 164 KHGTKIVSALAVDP-SGARFVSGSLDYTVK-FWDFQGMDASM-RS----------------------------------- 205 (641)
T ss_pred cCCceEEEEeeecC-CCceeeeccccceEE-EEecccccccc-hh-----------------------------------
Confidence 68999999999999 899999999999999 77753222100 00
Q ss_pred eccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCC
Q psy14130 83 PIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLS 162 (494)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~ 162 (494)
|+.+... ..+.++...++ ..++..+++.+..+.+|+|-......
T Consensus 206 ------------fr~l~P~---------------E~h~i~sl~ys---------~Tg~~iLvvsg~aqakl~DRdG~~~~ 249 (641)
T KOG0772|consen 206 ------------FRQLQPC---------------ETHQINSLQYS---------VTGDQILVVSGSAQAKLLDRDGFEIV 249 (641)
T ss_pred ------------hhccCcc---------------cccccceeeec---------CCCCeEEEEecCcceeEEccCCceee
Confidence 1100000 00122222222 23344444555567888886543221
Q ss_pred CC-----cccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe-EEEEec-----CCCCceEEEEEcCCC
Q psy14130 163 GN-----LNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE-ALTVID-----CHPDVINCLSFNRDG 231 (494)
Q Consensus 163 ~~-----~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~-~~~~~~-----~h~~~v~~l~~~~~~ 231 (494)
+. +..-+..-+||...++|.+|+|.....++|++.||++||||+...+ .+..++ +..-++++++|++||
T Consensus 250 e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg 329 (641)
T KOG0772|consen 250 EFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDG 329 (641)
T ss_pred eeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCc
Confidence 11 1122335579999999999999988899999999999999997643 344443 344578999999999
Q ss_pred CEEEEEeCCCeEEEEeCCCCc---eEEEeeecCC-CCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEe-e
Q psy14130 232 SRLVTTCKDKTVRVLDPRTGL---VISQGVCHPG-TRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALE-T 306 (494)
Q Consensus 232 ~~l~s~~~d~~v~iwd~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~-~ 306 (494)
++||+|+.||.|.+||.+... ....-.+|.. ..++++.|+++++.|++-| .|+++++||+++.+.++... .
T Consensus 330 ~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg----~D~tLKvWDLrq~kkpL~~~tg 405 (641)
T KOG0772|consen 330 KLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRG----FDDTLKVWDLRQFKKPLNVRTG 405 (641)
T ss_pred chhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhcc----CCCceeeeeccccccchhhhcC
Confidence 999999999999999986543 2233356665 2389999999988888777 79999999999988776543 2
Q ss_pred ecCCCceEEeEEeCCCCEEEEEEe------CCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceee--ecccee
Q psy14130 307 VDSSSGVLFPYYDHDTRILFLAGK------GDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDV--TQCEIF 378 (494)
Q Consensus 307 ~~~~~~v~~~~~~~~~~~l~~~g~------~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~--~~~~~~ 378 (494)
+.....-..++|||+.+.| ++|. ..|.+.+||..+-..+.++-- ....|..+.|+|+-+.+. ++|+.+
T Consensus 406 L~t~~~~tdc~FSPd~kli-~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i---~~aSvv~~~WhpkLNQi~~gsgdG~~ 481 (641)
T KOG0772|consen 406 LPTPFPGTDCCFSPDDKLI-LTGTSAPNGMTAGTLFFFDRMTLDTVYKIDI---STASVVRCLWHPKLNQIFAGSGDGTA 481 (641)
T ss_pred CCccCCCCccccCCCceEE-EecccccCCCCCceEEEEeccceeeEEEecC---CCceEEEEeecchhhheeeecCCCce
Confidence 3344556778999999998 7764 357899999888665433321 256799999999765443 358888
Q ss_pred EEEE
Q psy14130 379 RFFK 382 (494)
Q Consensus 379 ~~~~ 382 (494)
++|-
T Consensus 482 ~vyY 485 (641)
T KOG0772|consen 482 HVYY 485 (641)
T ss_pred EEEE
Confidence 8763
|
|
| >KOG0275|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.9e-28 Score=210.96 Aligned_cols=217 Identities=14% Similarity=0.248 Sum_probs=178.1
Q ss_pred cEEEEEcCCCCCCCCcccceEecc-cccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLH-GHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~-~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+|++|.+.++ .+++.+. +|+..|+|+.|+.++ ..+.+++.|.++++.-+..|+++..+.+|...|+...|.
T Consensus 286 kIKvWri~tG-------~ClRrFdrAHtkGvt~l~FSrD~-SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft 357 (508)
T KOG0275|consen 286 KIKVWRIETG-------QCLRRFDRAHTKGVTCLSFSRDN-SQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFT 357 (508)
T ss_pred cEEEEEEecc-------hHHHHhhhhhccCeeEEEEccCc-chhhcccccceEEEeccccchhHHHhcCccccccceEEc
Confidence 7999999999 6777765 899999999999998 689999999999999999999999999999999999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceEEEeeec-CCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEe-e
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGLVISQGVCH-PGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALE-T 306 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~-~ 306 (494)
+||..+++++.||+|++|+..+++++.+++.. ....+..+...|.+...+.++ ...++|.|.++... ....+. .
T Consensus 358 ~dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVC---Nrsntv~imn~qGQ-vVrsfsSG 433 (508)
T KOG0275|consen 358 DDGHHIISASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVC---NRSNTVYIMNMQGQ-VVRSFSSG 433 (508)
T ss_pred CCCCeEEEecCCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEE---cCCCeEEEEeccce-EEeeeccC
Confidence 99999999999999999999999999888643 233477788888777666666 58889999988642 111111 1
Q ss_pred ecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeee--ccceeEEEE
Q psy14130 307 VDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVT--QCEIFRFFK 382 (494)
Q Consensus 307 ~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~--~~~~~~~~~ 382 (494)
....+...+...+|.|.++|+. ++|+.++.|.+.+|+.. +.+..+ ..-+.+++-+|...++++ .|+.+++|+
T Consensus 434 kREgGdFi~~~lSpkGewiYci-gED~vlYCF~~~sG~LE-~tl~Vh--EkdvIGl~HHPHqNllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 434 KREGGDFINAILSPKGEWIYCI-GEDGVLYCFSVLSGKLE-RTLPVH--EKDVIGLTHHPHQNLLASYSEDGLLKLWK 507 (508)
T ss_pred CccCCceEEEEecCCCcEEEEE-ccCcEEEEEEeecCcee-eeeecc--cccccccccCcccchhhhhcccchhhhcC
Confidence 1123456778899999999554 59999999999999863 444333 456899999999988887 599999996
|
|
| >KOG0265|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-27 Score=203.80 Aligned_cols=208 Identities=24% Similarity=0.329 Sum_probs=180.3
Q ss_pred ccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECC-CCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEE
Q psy14130 166 NEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVG-KGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVR 244 (494)
Q Consensus 166 ~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~-~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~ 244 (494)
..++..+.+|++.|+.+.|+|+| .+||||+.|..|.+|++. .-+....+++|.+.|..+.|.+|++.|++++.|++|+
T Consensus 37 ~ap~m~l~gh~geI~~~~F~P~g-s~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~ 115 (338)
T KOG0265|consen 37 QAPIMLLPGHKGEIYTIKFHPDG-SCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVR 115 (338)
T ss_pred cchhhhcCCCcceEEEEEECCCC-CeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEE
Confidence 36777889999999999999998 799999999999999964 3455677889999999999999999999999999999
Q ss_pred EEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCE
Q psy14130 245 VLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRI 324 (494)
Q Consensus 245 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 324 (494)
.||.++|+.+..+++|... ++.+.-..-+..++.+| +.|+++++||+|+.... ........++++.|.-++..
T Consensus 116 ~wD~~tG~~~rk~k~h~~~-vNs~~p~rrg~~lv~Sg---sdD~t~kl~D~R~k~~~---~t~~~kyqltAv~f~d~s~q 188 (338)
T KOG0265|consen 116 GWDAETGKRIRKHKGHTSF-VNSLDPSRRGPQLVCSG---SDDGTLKLWDIRKKEAI---KTFENKYQLTAVGFKDTSDQ 188 (338)
T ss_pred EEecccceeeehhccccce-eeecCccccCCeEEEec---CCCceEEEEeecccchh---hccccceeEEEEEecccccc
Confidence 9999999999999999987 77776555567899999 99999999999975442 23335578899999999999
Q ss_pred EEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 325 LFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 325 l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
+ .+|+-|+.|++||++.+... ..+..+ ..+|+++..+|+|..+.+. |.++|+|++..
T Consensus 189 v-~sggIdn~ikvWd~r~~d~~-~~lsGh--~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp 247 (338)
T KOG0265|consen 189 V-ISGGIDNDIKVWDLRKNDGL-YTLSGH--ADTITGLSLSRYGSFLLSNSMDNTVRVWDVRP 247 (338)
T ss_pred e-eeccccCceeeeccccCcce-EEeecc--cCceeeEEeccCCCccccccccceEEEEEecc
Confidence 8 89999999999999988764 334443 5889999999999999986 99999999876
|
|
| >KOG2096|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-26 Score=200.27 Aligned_cols=299 Identities=17% Similarity=0.270 Sum_probs=201.7
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 82 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~ 82 (494)
|||.+.|++++|+. ||+.|+|++.|++|| +|+...-.......++..........+...++..+++..+..|..+.++
T Consensus 83 KgH~~~vt~~~FsS-dGK~lat~~~Dr~Ir-~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l~vy 160 (420)
T KOG2096|consen 83 KGHKKEVTDVAFSS-DGKKLATISGDRSIR-LWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKLCVY 160 (420)
T ss_pred hccCCceeeeEEcC-CCceeEEEeCCceEE-EEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEEEEE
Confidence 89999999999999 999999999999999 8887654433333333333333444556677777778888888888887
Q ss_pred eccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEE--EcCcEEEEEcCCCC
Q psy14130 83 PIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL--PIHRVKLWYIPDGG 160 (494)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~v~iw~~~~~~ 160 (494)
.+.+.. .+++.+.+... +.+.+... +... .+.+...+++.++.. .+.+|.||++. +
T Consensus 161 k~~K~~---dG~~~~~~v~~-------D~~~f~~k-h~v~---------~i~iGiA~~~k~imsas~dt~i~lw~lk-G- 218 (420)
T KOG2096|consen 161 KLVKKT---DGSGSHHFVHI-------DNLEFERK-HQVD---------IINIGIAGNAKYIMSASLDTKICLWDLK-G- 218 (420)
T ss_pred Eeeecc---cCCCCcccccc-------cccccchh-cccc---------eEEEeecCCceEEEEecCCCcEEEEecC-C-
Confidence 765431 23333222111 11111000 0000 011111222222222 23469999998 5
Q ss_pred CCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECC---CC-----eEEEEecCCCCceEEEEEcCCCC
Q psy14130 161 LSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVG---KG-----EALTVIDCHPDVINCLSFNRDGS 232 (494)
Q Consensus 161 ~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~---~~-----~~~~~~~~h~~~v~~l~~~~~~~ 232 (494)
+.+..+......-+..+.+|+| +++++++..-.|++|.+- .| ..+..+++|...|..++|+++..
T Consensus 219 ------q~L~~idtnq~~n~~aavSP~G-RFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~ 291 (420)
T KOG2096|consen 219 ------QLLQSIDTNQSSNYDAAVSPDG-RFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSST 291 (420)
T ss_pred ------ceeeeeccccccccceeeCCCC-cEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcc
Confidence 3344444455556678899999 799999999999999973 22 23567889999999999999999
Q ss_pred EEEEEeCCCeEEEEeCCC-------CceEEEe---eecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCce
Q psy14130 233 RLVTTCKDKTVRVLDPRT-------GLVISQG---VCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPL 302 (494)
Q Consensus 233 ~l~s~~~d~~v~iwd~~~-------~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~ 302 (494)
.++|.|+||++||||+.- .+.+.+. ....+....++..+|. +.+|+.+ ....+++|..++++...
T Consensus 292 r~vtvSkDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~-g~~lA~s----~gs~l~~~~se~g~~~~ 366 (420)
T KOG2096|consen 292 RAVTVSKDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPS-GDSLAVS----FGSDLKVFASEDGKDYP 366 (420)
T ss_pred eeEEEecCCcEEEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCC-CcEEEee----cCCceEEEEcccCccch
Confidence 999999999999999752 1222222 1112333678999998 6777777 46789999998866544
Q ss_pred eEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEe
Q psy14130 303 ALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYEL 340 (494)
Q Consensus 303 ~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~ 340 (494)
.... -|...|.++.|+++|+++ +++ +|..++++.-
T Consensus 367 ~~e~-~h~~~Is~is~~~~g~~~-atc-Gdr~vrv~~n 401 (420)
T KOG2096|consen 367 ELED-IHSTTISSISYSSDGKYI-ATC-GDRYVRVIRN 401 (420)
T ss_pred hHHH-hhcCceeeEEecCCCcEE-eee-cceeeeeecC
Confidence 4333 367889999999999999 655 6889998763
|
|
| >KOG0281|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-28 Score=213.49 Aligned_cols=180 Identities=22% Similarity=0.328 Sum_probs=150.2
Q ss_pred EcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEE
Q psy14130 147 PIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLS 226 (494)
Q Consensus 147 ~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~ 226 (494)
.+.++.+||+....-+ ...+.+.||...|+.+.|+. .+++++|.|.+|++|++.+++.++++.+|...|-|++
T Consensus 295 kDrsiaVWdm~sps~i----t~rrVLvGHrAaVNvVdfd~---kyIVsASgDRTikvW~~st~efvRtl~gHkRGIAClQ 367 (499)
T KOG0281|consen 295 KDRSIAVWDMASPTDI----TLRRVLVGHRAAVNVVDFDD---KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ 367 (499)
T ss_pred CCceeEEEeccCchHH----HHHHHHhhhhhheeeecccc---ceEEEecCCceEEEEeccceeeehhhhcccccceehh
Confidence 3457999999876421 45568899999999999984 5999999999999999999999999999999999998
Q ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCcee---
Q psy14130 227 FNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLA--- 303 (494)
Q Consensus 227 ~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~--- 303 (494)
+. |+++++|+.|.+|++||+..|.+++.+.+|..- +.++.|.. .++++.| .||.|++||+.....+..
T Consensus 368 Yr--~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeL-vRciRFd~--krIVSGa----YDGkikvWdl~aaldpra~~~ 438 (499)
T KOG0281|consen 368 YR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEEL-VRCIRFDN--KRIVSGA----YDGKIKVWDLQAALDPRAPAS 438 (499)
T ss_pred cc--CeEEEecCCCceEEEEeccccHHHHHHhchHHh-hhheeecC--ceeeecc----ccceEEEEecccccCCccccc
Confidence 84 899999999999999999999999999999987 77777743 5677666 799999999987555421
Q ss_pred ----EeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCc
Q psy14130 304 ----LETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERP 345 (494)
Q Consensus 304 ----~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~ 345 (494)
.....|.+.|..+.|+ ...+ ++++.|.+|.+||+.++.+
T Consensus 439 ~~Cl~~lv~hsgRVFrLQFD--~fqI-vsssHddtILiWdFl~~~~ 481 (499)
T KOG0281|consen 439 TLCLRTLVEHSGRVFRLQFD--EFQI-ISSSHDDTILIWDFLNGPP 481 (499)
T ss_pred chHHHhhhhccceeEEEeec--ceEE-EeccCCCeEEEEEcCCCCc
Confidence 1223566788888884 4556 8888999999999998765
|
|
| >KOG0310|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-26 Score=210.97 Aligned_cols=211 Identities=18% Similarity=0.264 Sum_probs=175.3
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcC
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNR 229 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~ 229 (494)
.|+|+|+.+. ..+..+.+|+.+|..+.|+|.+..+|++|++|+.+++||+.+......+.+|++.|.+.+|+|
T Consensus 91 ~V~vfD~k~r-------~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~ 163 (487)
T KOG0310|consen 91 HVKVFDMKSR-------VILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISP 163 (487)
T ss_pred cEEEeccccH-------HHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeecccc
Confidence 6999997664 567789999999999999999989999999999999999999987668999999999999999
Q ss_pred C-CCEEEEEeCCCeEEEEeCCCC-ceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee
Q psy14130 230 D-GSRLVTTCKDKTVRVLDPRTG-LVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV 307 (494)
Q Consensus 230 ~-~~~l~s~~~d~~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~ 307 (494)
. +.+++||+.||+||+||++.. ..+.++. |..+ +..+.+.|.++.++++| ...|++||+.++.+.... ..
T Consensus 164 ~~~hivvtGsYDg~vrl~DtR~~~~~v~eln-hg~p-Ve~vl~lpsgs~iasAg-----Gn~vkVWDl~~G~qll~~-~~ 235 (487)
T KOG0310|consen 164 ANDHIVVTGSYDGKVRLWDTRSLTSRVVELN-HGCP-VESVLALPSGSLIASAG-----GNSVKVWDLTTGGQLLTS-MF 235 (487)
T ss_pred CCCeEEEecCCCceEEEEEeccCCceeEEec-CCCc-eeeEEEcCCCCEEEEcC-----CCeEEEEEecCCceehhh-hh
Confidence 5 558999999999999999987 4555554 5555 89999999966666666 789999999876554433 23
Q ss_pred cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEE
Q psy14130 308 DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRF 380 (494)
Q Consensus 308 ~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~ 380 (494)
.|...|+|+++..++..| ++|+-|+.+++||+.+-+ .......++||.+++.+|++..++.+ ++.+-+
T Consensus 236 ~H~KtVTcL~l~s~~~rL-lS~sLD~~VKVfd~t~~K----vv~s~~~~~pvLsiavs~dd~t~viGmsnGlv~~ 305 (487)
T KOG0310|consen 236 NHNKTVTCLRLASDSTRL-LSGSLDRHVKVFDTTNYK----VVHSWKYPGPVLSIAVSPDDQTVVIGMSNGLVSI 305 (487)
T ss_pred cccceEEEEEeecCCceE-eecccccceEEEEccceE----EEEeeecccceeeEEecCCCceEEEecccceeee
Confidence 488899999999999998 999999999999976644 34455567899999999998888876 444433
|
|
| >KOG0316|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.4e-27 Score=194.52 Aligned_cols=204 Identities=21% Similarity=0.329 Sum_probs=175.7
Q ss_pred ceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEe
Q psy14130 168 WIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLD 247 (494)
Q Consensus 168 ~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd 247 (494)
....+.+|+++|..+.|+-+| ++.++|+.|.+|++|++..+.+++++.+|...|..++.+.|+..+++|+.|+.+.+||
T Consensus 9 r~~~l~~~qgaV~avryN~dG-nY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwD 87 (307)
T KOG0316|consen 9 RLSILDCAQGAVRAVRYNVDG-NYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWD 87 (307)
T ss_pred hceeecccccceEEEEEccCC-CEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEE
Confidence 456788899999999999999 8999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee-cCCCceEEeEEeCCCCEEE
Q psy14130 248 PRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV-DSSSGVLFPYYDHDTRILF 326 (494)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~ 326 (494)
+.+|+.++.+.+|... ++.+.|+.+ ..++++| +-|..+++||.|+... ..++.+ +...+|.++... +..+
T Consensus 88 V~TGkv~Rr~rgH~aq-VNtV~fNee-sSVv~Sg---sfD~s~r~wDCRS~s~-ePiQildea~D~V~Si~v~--~heI- 158 (307)
T KOG0316|consen 88 VNTGKVDRRFRGHLAQ-VNTVRFNEE-SSVVASG---SFDSSVRLWDCRSRSF-EPIQILDEAKDGVSSIDVA--EHEI- 158 (307)
T ss_pred cccCeeeeecccccce-eeEEEecCc-ceEEEec---cccceeEEEEcccCCC-CccchhhhhcCceeEEEec--ccEE-
Confidence 9999999999999988 999999887 6778888 7899999999987432 223333 344678777664 4445
Q ss_pred EEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEeeCC
Q psy14130 327 LAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHTT 386 (494)
Q Consensus 327 ~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~~ 386 (494)
++|+.||+++.||++.|+....++ +.||++++|++++.+.+.+ ++++|+.+-.++
T Consensus 159 vaGS~DGtvRtydiR~G~l~sDy~-----g~pit~vs~s~d~nc~La~~l~stlrLlDk~tG 215 (307)
T KOG0316|consen 159 VAGSVDGTVRTYDIRKGTLSSDYF-----GHPITSVSFSKDGNCSLASSLDSTLRLLDKETG 215 (307)
T ss_pred EeeccCCcEEEEEeecceeehhhc-----CCcceeEEecCCCCEEEEeeccceeeecccchh
Confidence 899999999999999997543332 5789999999999988775 999999987764
|
|
| >KOG0643|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.6e-26 Score=192.46 Aligned_cols=210 Identities=15% Similarity=0.202 Sum_probs=166.9
Q ss_pred cceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeC-----CC
Q psy14130 167 EWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCK-----DK 241 (494)
Q Consensus 167 ~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~-----d~ 241 (494)
+.+.++.||++.|.|+..+-+. ..++||+.|.++++||+.+|+++.+++ ...+|..+.|+++|++++.+.. .+
T Consensus 43 erlGty~GHtGavW~~Did~~s-~~liTGSAD~t~kLWDv~tGk~la~~k-~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~ 120 (327)
T KOG0643|consen 43 ERLGTYDGHTGAVWCCDIDWDS-KHLITGSADQTAKLWDVETGKQLATWK-TNSPVKRVDFSFGGNLILASTDKQMGYTC 120 (327)
T ss_pred ceeeeecCCCceEEEEEecCCc-ceeeeccccceeEEEEcCCCcEEEEee-cCCeeEEEeeccCCcEEEEEehhhcCcce
Confidence 3445778899999999999987 799999999999999999999999998 6789999999999998887754 46
Q ss_pred eEEEEeCC-------CCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceE
Q psy14130 242 TVRVLDPR-------TGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVL 314 (494)
Q Consensus 242 ~v~iwd~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~ 314 (494)
.|.++|++ ..++...+..+... ++.+.|.|-+..| .+| .+||.|.+||++++....... ..|...|+
T Consensus 121 ~v~~fdi~~~~~~~~s~ep~~kI~t~~sk-it~a~Wg~l~~~i-i~G---he~G~is~~da~~g~~~v~s~-~~h~~~In 194 (327)
T KOG0643|consen 121 FVSVFDIRDDSSDIDSEEPYLKIPTPDSK-ITSALWGPLGETI-IAG---HEDGSISIYDARTGKELVDSD-EEHSSKIN 194 (327)
T ss_pred EEEEEEccCChhhhcccCceEEecCCccc-eeeeeecccCCEE-EEe---cCCCcEEEEEcccCceeeech-hhhccccc
Confidence 79999998 34467788877766 8999999995555 455 599999999999865543332 24667999
Q ss_pred EeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEeccc------------------------------------------
Q psy14130 315 FPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQ------------------------------------------ 352 (494)
Q Consensus 315 ~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~------------------------------------------ 352 (494)
.+.+++|..++ ++|+.|.+-++||+.+-+.+..+...
T Consensus 195 d~q~s~d~T~F-iT~s~Dttakl~D~~tl~v~Kty~te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh 273 (327)
T KOG0643|consen 195 DLQFSRDRTYF-ITGSKDTTAKLVDVRTLEVLKTYTTERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYH 273 (327)
T ss_pred cccccCCcceE-EecccCccceeeeccceeeEEEeeecccccceecccccceEEecCCceeeeeeeecccccchhhhHHH
Confidence 99999999998 99999999999999775433222110
Q ss_pred ----------ccCCCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 353 ----------SLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 353 ----------~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
..|-+||.+++|+|+|...+++ |+.+|+..+..
T Consensus 274 ~i~eEEigrvkGHFGPINsvAfhPdGksYsSGGEDG~VR~h~Fd~ 318 (327)
T KOG0643|consen 274 LIFEEEIGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRLHHFDS 318 (327)
T ss_pred HHHHHHhccccccccCcceeEECCCCcccccCCCCceEEEEEecc
Confidence 0134788888888888888876 77777776554
|
|
| >KOG0315|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.8e-26 Score=191.86 Aligned_cols=188 Identities=19% Similarity=0.285 Sum_probs=154.8
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEec-CCCCceEEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVID-CHPDVINCLSF 227 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~h~~~v~~l~~ 227 (494)
++++|||+... .+.+.++ |..+|+++..+|+- ..|++|..+|.|++||+.+..+...+- .-...|.++..
T Consensus 105 gt~kIWdlR~~-------~~qR~~~-~~spVn~vvlhpnQ-teLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v 175 (311)
T KOG0315|consen 105 GTVKIWDLRSL-------SCQRNYQ-HNSPVNTVVLHPNQ-TELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTV 175 (311)
T ss_pred ceEEEEeccCc-------ccchhcc-CCCCcceEEecCCc-ceEEeecCCCcEEEEEccCCccccccCCCCCcceeeEEE
Confidence 37999999885 4434444 88999999999996 799999999999999999887666553 34578999999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCc------eEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCc
Q psy14130 228 NRDGSRLVTTCKDKTVRVLDPRTGL------VISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTP 301 (494)
Q Consensus 228 ~~~~~~l~s~~~d~~v~iwd~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~ 301 (494)
.|||++++.+...|+..+|++-+.. ++.+++.|.+. +.++.++|++ ++++++ +.|.+++||+.++. ..
T Consensus 176 ~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~-il~C~lSPd~-k~lat~---ssdktv~iwn~~~~-~k 249 (311)
T KOG0315|consen 176 MPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGH-ILRCLLSPDV-KYLATC---SSDKTVKIWNTDDF-FK 249 (311)
T ss_pred cCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccce-EEEEEECCCC-cEEEee---cCCceEEEEecCCc-ee
Confidence 9999999999999999999987653 66778899988 9999999995 555555 59999999999886 33
Q ss_pred eeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEeccc
Q psy14130 302 LALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQ 352 (494)
Q Consensus 302 ~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~ 352 (494)
.......|..-+..++||.||++| ++|+.|+.+++||+..++.+...-.+
T Consensus 250 le~~l~gh~rWvWdc~FS~dg~Yl-vTassd~~~rlW~~~~~k~v~qy~gh 299 (311)
T KOG0315|consen 250 LELVLTGHQRWVWDCAFSADGEYL-VTASSDHTARLWDLSAGKEVRQYQGH 299 (311)
T ss_pred eEEEeecCCceEEeeeeccCccEE-EecCCCCceeecccccCceeeecCCc
Confidence 333334566789999999999999 99999999999999999875554443
|
|
| >KOG0293|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-26 Score=206.66 Aligned_cols=288 Identities=14% Similarity=0.181 Sum_probs=205.4
Q ss_pred ccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEEe
Q psy14130 4 LYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLP 83 (494)
Q Consensus 4 gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~ 83 (494)
-|.+.|+=+.||+ +|++|||++.|.+.- +|....... +++
T Consensus 222 ~htdEVWfl~FS~-nGkyLAsaSkD~Tai-iw~v~~d~~-----~kl--------------------------------- 261 (519)
T KOG0293|consen 222 DHTDEVWFLQFSH-NGKYLASASKDSTAI-IWIVVYDVH-----FKL--------------------------------- 261 (519)
T ss_pred hCCCcEEEEEEcC-CCeeEeeccCCceEE-EEEEecCcc-----eee---------------------------------
Confidence 5899999999999 999999999999997 776432111 000
Q ss_pred ccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCCC
Q psy14130 84 IHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLSG 163 (494)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~~ 163 (494)
...+.+....+.++.|+|+-..+...+. ...+.+||+.++.+.
T Consensus 262 ---------------------------~~tlvgh~~~V~yi~wSPDdryLlaCg~---------~e~~~lwDv~tgd~~- 304 (519)
T KOG0293|consen 262 ---------------------------KKTLVGHSQPVSYIMWSPDDRYLLACGF---------DEVLSLWDVDTGDLR- 304 (519)
T ss_pred ---------------------------eeeeecccCceEEEEECCCCCeEEecCc---------hHheeeccCCcchhh-
Confidence 0011122344555666554332222211 235899999999443
Q ss_pred CcccceEec-ccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCC-CceEEEEEcCCCCEEEEEeCCC
Q psy14130 164 NLNEWIMDL-HGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHP-DVINCLSFNRDGSRLVTTCKDK 241 (494)
Q Consensus 164 ~~~~~~~~~-~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~-~~v~~l~~~~~~~~l~s~~~d~ 241 (494)
..+ .+|...+.+++|.|+| ..+++|+.|+++..||+. |..+...++-. ..|.+++..+||+++++.+.|.
T Consensus 305 ------~~y~~~~~~S~~sc~W~pDg-~~~V~Gs~dr~i~~wdlD-gn~~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~ 376 (519)
T KOG0293|consen 305 ------HLYPSGLGFSVSSCAWCPDG-FRFVTGSPDRTIIMWDLD-GNILGNWEGVRDPKVHDLAITYDGKYVLLVTVDK 376 (519)
T ss_pred ------hhcccCcCCCcceeEEccCC-ceeEecCCCCcEEEecCC-cchhhcccccccceeEEEEEcCCCcEEEEEeccc
Confidence 222 2356889999999999 789999999999999995 55555555433 4689999999999999999999
Q ss_pred eEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCC
Q psy14130 242 TVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHD 321 (494)
Q Consensus 242 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 321 (494)
.|++++.++...+.....+.. +.+...+.+ ++++.+. -.+..+++||+.....+..........-+..-+|---
T Consensus 377 ~i~l~~~e~~~dr~lise~~~--its~~iS~d-~k~~Lvn---L~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~ 450 (519)
T KOG0293|consen 377 KIRLYNREARVDRGLISEEQP--ITSFSISKD-GKLALVN---LQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGG 450 (519)
T ss_pred ceeeechhhhhhhccccccCc--eeEEEEcCC-CcEEEEE---cccCeeEEeecchhhHHHHhhcccccceEEEeccCCC
Confidence 999999887665544444443 788888888 5566555 5899999999986544444443333344555566554
Q ss_pred CCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCc-eeeec--cceeEEEEeeC
Q psy14130 322 TRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRG-CDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 322 ~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~-~~~~~--~~~~~~~~l~~ 385 (494)
...++++|++|+.|+||+..+++++..+ .+| ...|.+++|+|... +++++ |+++|||.+..
T Consensus 451 ~~~fiaSGSED~kvyIWhr~sgkll~~L-sGH--s~~vNcVswNP~~p~m~ASasDDgtIRIWg~~~ 514 (519)
T KOG0293|consen 451 NDKFIASGSEDSKVYIWHRISGKLLAVL-SGH--SKTVNCVSWNPADPEMFASASDDGTIRIWGPSD 514 (519)
T ss_pred CcceEEecCCCceEEEEEccCCceeEee-cCC--cceeeEEecCCCCHHHhhccCCCCeEEEecCCc
Confidence 4444599999999999999999985444 443 46799999999765 44543 99999998765
|
|
| >KOG0292|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-26 Score=225.09 Aligned_cols=226 Identities=18% Similarity=0.315 Sum_probs=191.2
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcC
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNR 229 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~ 229 (494)
.|++||..-+ ..+..+..|.++|..++|||+. -+++||+.|..|++|+..+.+++.++.+|-+.|..+.|++
T Consensus 32 ~IQlWDYRM~-------tli~rFdeHdGpVRgv~FH~~q-plFVSGGDDykIkVWnYk~rrclftL~GHlDYVRt~~FHh 103 (1202)
T KOG0292|consen 32 VIQLWDYRMG-------TLIDRFDEHDGPVRGVDFHPTQ-PLFVSGGDDYKIKVWNYKTRRCLFTLLGHLDYVRTVFFHH 103 (1202)
T ss_pred eeeeehhhhh-------hHHhhhhccCCccceeeecCCC-CeEEecCCccEEEEEecccceehhhhccccceeEEeeccC
Confidence 6999999888 6677888999999999999998 5999999999999999999999999999999999999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCC----ce---
Q psy14130 230 DGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNT----PL--- 302 (494)
Q Consensus 230 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~----~~--- 302 (494)
.-..|+|+|.|.+||||+..+++++..+.+|... +.+..|+|. ..+++++ +-|.+|||||+...+. +.
T Consensus 104 eyPWIlSASDDQTIrIWNwqsr~~iavltGHnHY-VMcAqFhpt-EDlIVSa---SLDQTVRVWDisGLRkk~~~pg~~e 178 (1202)
T KOG0292|consen 104 EYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHY-VMCAQFHPT-EDLIVSA---SLDQTVRVWDISGLRKKNKAPGSLE 178 (1202)
T ss_pred CCceEEEccCCCeEEEEeccCCceEEEEecCceE-EEeeccCCc-cceEEEe---cccceEEEEeecchhccCCCCCCch
Confidence 9999999999999999999999999999999998 999999998 5677777 6999999999753221 11
Q ss_pred --------------------eEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEE
Q psy14130 303 --------------------ALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGL 362 (494)
Q Consensus 303 --------------------~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~ 362 (494)
....-+|..+|+-++|+|.-..+ ++|+.|..|++|.+...+.. ..-.-..|.+.|.++
T Consensus 179 ~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpli-VSG~DDRqVKlWrmnetKaW-EvDtcrgH~nnVssv 256 (1202)
T KOG0292|consen 179 DQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLI-VSGADDRQVKLWRMNETKAW-EVDTCRGHYNNVSSV 256 (1202)
T ss_pred hhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceE-EecCCcceeeEEEeccccce-eehhhhcccCCcceE
Confidence 00112466889999999998888 99999999999999876542 211112346789999
Q ss_pred EEecCCceeeec--cceeEEEEeeCCCCeEE
Q psy14130 363 GFMPKRGCDVTQ--CEIFRFFKLHTTRNMCE 391 (494)
Q Consensus 363 ~~~p~~~~~~~~--~~~~~~~~l~~~~~~~~ 391 (494)
-|+|...++++. |..+|+|+++. +..++
T Consensus 257 lfhp~q~lIlSnsEDksirVwDm~k-Rt~v~ 286 (1202)
T KOG0292|consen 257 LFHPHQDLILSNSEDKSIRVWDMTK-RTSVQ 286 (1202)
T ss_pred EecCccceeEecCCCccEEEEeccc-cccee
Confidence 999988877774 99999999987 44444
|
|
| >KOG0288|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.5e-27 Score=210.54 Aligned_cols=214 Identities=18% Similarity=0.196 Sum_probs=174.6
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.+++|++... ....+|.||++.|+++.|.... ..+++|+.|.+|++||+....+..++- ....+..|+.+
T Consensus 241 ~~~r~Wnvd~~-------r~~~TLsGHtdkVt~ak~~~~~-~~vVsgs~DRtiK~WDl~k~~C~kt~l-~~S~cnDI~~~ 311 (459)
T KOG0288|consen 241 KNLRLWNVDSL-------RLRHTLSGHTDKVTAAKFKLSH-SRVVSGSADRTIKLWDLQKAYCSKTVL-PGSQCNDIVCS 311 (459)
T ss_pred Cceeeeeccch-------hhhhhhcccccceeeehhhccc-cceeeccccchhhhhhhhhhheecccc-ccccccceEec
Confidence 36999999988 6678899999999999999876 469999999999999999988887765 34556667665
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEe--e
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALE--T 306 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~--~ 306 (494)
+..++||-.|++||+||.+++.++.....+. .+.++..+.++..+++++ .|.++.+.|+++......+. .
T Consensus 312 --~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~gg--~vtSl~ls~~g~~lLsss----RDdtl~viDlRt~eI~~~~sA~g 383 (459)
T KOG0288|consen 312 --ISDVISGHFDKKVRFWDIRSADKTRSVPLGG--RVTSLDLSMDGLELLSSS----RDDTLKVIDLRTKEIRQTFSAEG 383 (459)
T ss_pred --ceeeeecccccceEEEeccCCceeeEeecCc--ceeeEeeccCCeEEeeec----CCCceeeeecccccEEEEeeccc
Confidence 6678999999999999999999999988776 389999999988888887 89999999999855433221 2
Q ss_pred ecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEE
Q psy14130 307 VDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFF 381 (494)
Q Consensus 307 ~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~ 381 (494)
+.....++.+.|||++.++ ++|+.||.|+||++.+++.... +........|++++|+|.|..+++. +..+++|
T Consensus 384 ~k~asDwtrvvfSpd~~Yv-aAGS~dgsv~iW~v~tgKlE~~-l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW 458 (459)
T KOG0288|consen 384 FKCASDWTRVVFSPDGSYV-AAGSADGSVYIWSVFTGKLEKV-LSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLW 458 (459)
T ss_pred cccccccceeEECCCCcee-eeccCCCcEEEEEccCceEEEE-eccCCCCcceEEEEEcCCCchhhcccCCcceEec
Confidence 2234558889999999999 9999999999999999987433 3333334479999999988877765 6677777
|
|
| >KOG0640|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.2e-26 Score=197.23 Aligned_cols=308 Identities=16% Similarity=0.233 Sum_probs=220.9
Q ss_pred ccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEEe
Q psy14130 4 LYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLP 83 (494)
Q Consensus 4 gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~ 83 (494)
-|.+++.+.+|+| ||.++||||.|..|+ +.+.+..-... ....+..+ + .-.
T Consensus 110 ~HK~~cR~aafs~-DG~lvATGsaD~SIK-ildvermlaks-~~~em~~~--~---------------------~qa--- 160 (430)
T KOG0640|consen 110 SHKSPCRAAAFSP-DGSLVATGSADASIK-ILDVERMLAKS-KPKEMISG--D---------------------TQA--- 160 (430)
T ss_pred ecccceeeeeeCC-CCcEEEccCCcceEE-Eeehhhhhhhc-chhhhccC--C---------------------ccc---
Confidence 5999999999999 999999999999999 66543100000 00000000 0 000
Q ss_pred ccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCCC
Q psy14130 84 IHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLSG 163 (494)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~~ 163 (494)
+..-.+.+| .+..+++...+.|.-..++..+ .+ ++|+++|+......
T Consensus 161 -------~hPvIRTlY----------------DH~devn~l~FHPre~ILiS~s-rD--------~tvKlFDfsK~saK- 207 (430)
T KOG0640|consen 161 -------RHPVIRTLY----------------DHVDEVNDLDFHPRETILISGS-RD--------NTVKLFDFSKTSAK- 207 (430)
T ss_pred -------CCceEeehh----------------hccCcccceeecchhheEEecc-CC--------CeEEEEecccHHHH-
Confidence 000001111 1234566677777655444433 33 37999999865332
Q ss_pred CcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEe---cCCCCceEEEEEcCCCCEEEEEeCC
Q psy14130 164 NLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVI---DCHPDVINCLSFNRDGSRLVTTCKD 240 (494)
Q Consensus 164 ~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~---~~h~~~v~~l~~~~~~~~l~s~~~d 240 (494)
+..+.++ ...+|.++.|+|.| .+|+.|..-.++++||+++-++...- .+|.+.|+++.+++.|++.+++++|
T Consensus 208 ---rA~K~~q-d~~~vrsiSfHPsG-efllvgTdHp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkD 282 (430)
T KOG0640|consen 208 ---RAFKVFQ-DTEPVRSISFHPSG-EFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKD 282 (430)
T ss_pred ---HHHHHhh-ccceeeeEeecCCC-ceEEEecCCCceeEEeccceeEeeecCcccccccceeEEEecCCccEEEEeccC
Confidence 2222333 56789999999999 59999998899999999998876554 3699999999999999999999999
Q ss_pred CeEEEEeCCCCceEEEe-eecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCC---ceEEe
Q psy14130 241 KTVRVLDPRTGLVISQG-VCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSS---GVLFP 316 (494)
Q Consensus 241 ~~v~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~---~v~~~ 316 (494)
|.|++||--+++++.++ .+|.+..+.+..|..++..+|++| .|..+++|.+.+++........+..+ --...
T Consensus 283 G~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG----~DS~vkLWEi~t~R~l~~YtGAg~tgrq~~rtqA 358 (430)
T KOG0640|consen 283 GAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSG----KDSTVKLWEISTGRMLKEYTGAGTTGRQKHRTQA 358 (430)
T ss_pred CcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecC----CcceeeeeeecCCceEEEEecCCcccchhhhhhh
Confidence 99999999999988887 578888899999999988888888 89999999999876654443322111 12346
Q ss_pred EEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEee
Q psy14130 317 YYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLH 384 (494)
Q Consensus 317 ~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~ 384 (494)
.|+....+++.---..+.+.-||.++.... .+....+.++++.+.-+|.+..+++. |-.+|+|.-.
T Consensus 359 vFNhtEdyVl~pDEas~slcsWdaRtadr~--~l~slgHn~a~R~i~HSP~~p~FmTcsdD~raRFWyrr 426 (430)
T KOG0640|consen 359 VFNHTEDYVLFPDEASNSLCSWDARTADRV--ALLSLGHNGAVRWIVHSPVEPAFMTCSDDFRARFWYRR 426 (430)
T ss_pred hhcCccceEEccccccCceeeccccchhhh--hhcccCCCCCceEEEeCCCCCceeeecccceeeeeeec
Confidence 688888888555556678999999998753 23345568899999999998877764 7889999743
|
|
| >KOG0313|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.4e-26 Score=199.49 Aligned_cols=165 Identities=24% Similarity=0.430 Sum_probs=144.8
Q ss_pred cceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEE
Q psy14130 167 EWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVL 246 (494)
Q Consensus 167 ~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iw 246 (494)
.|+.++.||+.+|.++.|++. ..++++|.|++|+.||+.++..+.++. ....++++..+|..++|++|+.|..+|+|
T Consensus 251 ~P~vtl~GHt~~Vs~V~w~d~--~v~yS~SwDHTIk~WDletg~~~~~~~-~~ksl~~i~~~~~~~Ll~~gssdr~irl~ 327 (423)
T KOG0313|consen 251 TPLVTLEGHTEPVSSVVWSDA--TVIYSVSWDHTIKVWDLETGGLKSTLT-TNKSLNCISYSPLSKLLASGSSDRHIRLW 327 (423)
T ss_pred CceEEecccccceeeEEEcCC--CceEeecccceEEEEEeecccceeeee-cCcceeEeecccccceeeecCCCCceeec
Confidence 578899999999999999994 589999999999999999999988887 45789999999999999999999999999
Q ss_pred eCCCCc---eEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCC
Q psy14130 247 DPRTGL---VISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTR 323 (494)
Q Consensus 247 d~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 323 (494)
|+|++. ..+++.+|.+. +..+.|+|.+..+|++| +.|+++++||+|+...|+-. ...|...|.++.|.. +.
T Consensus 328 DPR~~~gs~v~~s~~gH~nw-Vssvkwsp~~~~~~~S~---S~D~t~klWDvRS~k~plyd-I~~h~DKvl~vdW~~-~~ 401 (423)
T KOG0313|consen 328 DPRTGDGSVVSQSLIGHKNW-VSSVKWSPTNEFQLVSG---SYDNTVKLWDVRSTKAPLYD-IAGHNDKVLSVDWNE-GG 401 (423)
T ss_pred CCCCCCCceeEEeeecchhh-hhheecCCCCceEEEEE---ecCCeEEEEEeccCCCccee-eccCCceEEEEeccC-Cc
Confidence 999876 67889999997 99999999999999999 89999999999987655432 234678899999964 44
Q ss_pred EEEEEEeCCCcEEEEEee
Q psy14130 324 ILFLAGKGDGNIRYYELT 341 (494)
Q Consensus 324 ~l~~~g~~dg~i~~wd~~ 341 (494)
.+ ++|+.|++|+++.-.
T Consensus 402 ~I-vSGGaD~~l~i~~~~ 418 (423)
T KOG0313|consen 402 LI-VSGGADNKLRIFKGS 418 (423)
T ss_pred eE-EeccCcceEEEeccc
Confidence 55 899999999998643
|
|
| >KOG0645|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-24 Score=183.62 Aligned_cols=217 Identities=19% Similarity=0.372 Sum_probs=172.0
Q ss_pred CcEEEEEcCCCCCCCCcccceEec-ccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC--eEEEEecCCCCceEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDL-HGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKG--EALTVIDCHPDVINCL 225 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~-~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~--~~~~~~~~h~~~v~~l 225 (494)
..|+||+...+.. + .+...+ .+|++.|.+++|+|.| ++||+||.|.++.||.-..+ +++.+++||+..|-++
T Consensus 37 k~vriw~~~~~~s---~-~ck~vld~~hkrsVRsvAwsp~g-~~La~aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~V 111 (312)
T KOG0645|consen 37 KAVRIWSTSSGDS---W-TCKTVLDDGHKRSVRSVAWSPHG-RYLASASFDATVVIWKKEDGEFECVATLEGHENEVKCV 111 (312)
T ss_pred ceEEEEecCCCCc---E-EEEEeccccchheeeeeeecCCC-cEEEEeeccceEEEeecCCCceeEEeeeeccccceeEE
Confidence 3699999885321 1 333333 4799999999999999 79999999999999986644 6889999999999999
Q ss_pred EEcCCCCEEEEEeCCCeEEEEeCCCCc---eEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCce
Q psy14130 226 SFNRDGSRLVTTCKDKTVRVLDPRTGL---VISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPL 302 (494)
Q Consensus 226 ~~~~~~~~l~s~~~d~~v~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~ 302 (494)
+|+++|++||+++.|+.|.||.+..+. +...+..|... +..+.|+|. ..||+++ +.|.+|++|+-.....-.
T Consensus 112 aws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqD-VK~V~WHPt-~dlL~S~---SYDnTIk~~~~~~dddW~ 186 (312)
T KOG0645|consen 112 AWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQD-VKHVIWHPT-EDLLFSC---SYDNTIKVYRDEDDDDWE 186 (312)
T ss_pred EEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeecccccc-ccEEEEcCC-cceeEEe---ccCCeEEEEeecCCCCee
Confidence 999999999999999999999988554 78888999988 999999998 4455555 589999999876333323
Q ss_pred eEeee-cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeee--ccceeE
Q psy14130 303 ALETV-DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVT--QCEIFR 379 (494)
Q Consensus 303 ~~~~~-~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~--~~~~~~ 379 (494)
....+ .+.+.|.+++|++.|..| ++++.|++++||-..+.-+ ..+..++..++|. + ..+++ +|+.++
T Consensus 187 c~~tl~g~~~TVW~~~F~~~G~rl-~s~sdD~tv~Iw~~~~~~~-------~~~sr~~Y~v~W~-~-~~IaS~ggD~~i~ 256 (312)
T KOG0645|consen 187 CVQTLDGHENTVWSLAFDNIGSRL-VSCSDDGTVSIWRLYTDLS-------GMHSRALYDVPWD-N-GVIASGGGDDAIR 256 (312)
T ss_pred EEEEecCccceEEEEEecCCCceE-EEecCCcceEeeeeccCcc-------hhcccceEeeeec-c-cceEeccCCCEEE
Confidence 33444 355689999999999999 9999999999999764321 2235678889998 3 34444 588999
Q ss_pred EEEeeC
Q psy14130 380 FFKLHT 385 (494)
Q Consensus 380 ~~~l~~ 385 (494)
+|+-..
T Consensus 257 lf~~s~ 262 (312)
T KOG0645|consen 257 LFKESD 262 (312)
T ss_pred EEEecC
Confidence 998653
|
|
| >KOG0264|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.3e-26 Score=205.41 Aligned_cols=260 Identities=17% Similarity=0.265 Sum_probs=205.0
Q ss_pred eceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCCCC---cccceEecccccccEEEEEEcC
Q psy14130 110 DNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLSGN---LNEWIMDLHGHKRRVGYIEWHP 186 (494)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~~~---~~~~~~~~~~h~~~V~~~~~~p 186 (494)
..+...+......+++.+|..+|.... + +.|.|||..+...... -..+-..|.||++.-.+++|++
T Consensus 119 ~~i~h~gEVnRaRymPQnp~iVAt~t~---~--------~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~ 187 (422)
T KOG0264|consen 119 QKINHDGEVNRARYMPQNPNIVATKTS---S--------GDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNR 187 (422)
T ss_pred EeccCCccchhhhhCCCCCcEEEecCC---C--------CCEEEEEeccCCCcccccccCCCceEEEeeccccccccccc
Confidence 344444555667778888888774332 2 2599999876543221 1144558899999889999999
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCe-------EEEEecCCCCceEEEEEcC-CCCEEEEEeCCCeEEEEeCC--CCceEEE
Q psy14130 187 TAENVVASAGFDYLIILWDVGKGE-------ALTVIDCHPDVINCLSFNR-DGSRLVTTCKDKTVRVLDPR--TGLVISQ 256 (494)
Q Consensus 187 ~~~~~l~s~s~d~~v~iwd~~~~~-------~~~~~~~h~~~v~~l~~~~-~~~~l~s~~~d~~v~iwd~~--~~~~~~~ 256 (494)
...-.|++|+.|++|++||+.... +...+.+|...|..++|++ +..++++++.|+.+.|||+| +.++...
T Consensus 188 ~~~g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~ 267 (422)
T KOG0264|consen 188 QQEGTLLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHS 267 (422)
T ss_pred ccceeEeeccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCccc
Confidence 987899999999999999997432 3567889999999999999 56689999999999999999 5567778
Q ss_pred eeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEE
Q psy14130 257 GVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIR 336 (494)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~ 336 (494)
..+|.+. +.++.|+|-++.+|++| +.|++|.+||+|+...++... ..|...|..+.|+|....++++++.|+.+.
T Consensus 268 ~~ah~~~-vn~~~fnp~~~~ilAT~---S~D~tV~LwDlRnL~~~lh~~-e~H~dev~~V~WSPh~etvLASSg~D~rl~ 342 (422)
T KOG0264|consen 268 VKAHSAE-VNCVAFNPFNEFILATG---SADKTVALWDLRNLNKPLHTF-EGHEDEVFQVEWSPHNETVLASSGTDRRLN 342 (422)
T ss_pred ccccCCc-eeEEEeCCCCCceEEec---cCCCcEEEeechhcccCceec-cCCCcceEEEEeCCCCCceeEecccCCcEE
Confidence 8899988 99999999999999999 899999999999987755433 357789999999999999989999999999
Q ss_pred EEEeeCCCceE----------E-ecccccCCCCeeEEEEecCCceeee---ccceeEEEEeeC
Q psy14130 337 YYELTNERPYI----------H-FLNQSLSGAPQRGLGFMPKRGCDVT---QCEIFRFFKLHT 385 (494)
Q Consensus 337 ~wd~~~~~~~~----------~-~~~~~~~~~~v~~~~~~p~~~~~~~---~~~~~~~~~l~~ 385 (494)
+||+..-...+ . +..+-.|...|..+.|+|.....++ .|.++.||+...
T Consensus 343 vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s~ 405 (422)
T KOG0264|consen 343 VWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMAE 405 (422)
T ss_pred EEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeeccc
Confidence 99996422111 1 1122234577999999998875544 599999999875
|
|
| >KOG0268|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-26 Score=203.66 Aligned_cols=281 Identities=17% Similarity=0.220 Sum_probs=213.3
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 82 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~ 82 (494)
.||.++|.|++=+|.....++||+.||.|+ +|+...... ...+.. +. |.
T Consensus 63 ~gHrdGV~~lakhp~~ls~~aSGs~DG~Vk-iWnlsqR~~--~~~f~A----H~--------------------G~---- 111 (433)
T KOG0268|consen 63 DGHRDGVSCLAKHPNKLSTVASGSCDGEVK-IWNLSQREC--IRTFKA----HE--------------------GL---- 111 (433)
T ss_pred cccccccchhhcCcchhhhhhccccCceEE-EEehhhhhh--hheeec----cc--------------------Cc----
Confidence 599999999999995558999999999999 888654332 111110 00 00
Q ss_pred eccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCC
Q psy14130 83 PIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLS 162 (494)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~ 162 (494)
+.+|.+.. ...+.+..+.+|+.|.+...
T Consensus 112 --------------------------V~Gi~v~~-----------------------~~~~tvgdDKtvK~wk~~~~--- 139 (433)
T KOG0268|consen 112 --------------------------VRGICVTQ-----------------------TSFFTVGDDKTVKQWKIDGP--- 139 (433)
T ss_pred --------------------------eeeEEecc-----------------------cceEEecCCcceeeeeccCC---
Confidence 01111110 11222223357999998753
Q ss_pred CCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCC-CCEEEEEeCCC
Q psy14130 163 GNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRD-GSRLVTTCKDK 241 (494)
Q Consensus 163 ~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~-~~~l~s~~~d~ 241 (494)
+.+++.+ ...+..+.-+..+ +.++||+. .|.|||.+...++.++.-..+.|.++.|+|- -..|++|+.|+
T Consensus 140 -----p~~tilg-~s~~~gIdh~~~~-~~FaTcGe--~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDr 210 (433)
T KOG0268|consen 140 -----PLHTILG-KSVYLGIDHHRKN-SVFATCGE--QIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDR 210 (433)
T ss_pred -----cceeeec-ccccccccccccc-ccccccCc--eeeecccccCCccceeecCCCceeEEecCCCcchheeeeccCC
Confidence 3444443 3456677777665 68999986 5999999988999999877889999999995 45777888999
Q ss_pred eEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCC
Q psy14130 242 TVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHD 321 (494)
Q Consensus 242 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 321 (494)
.|.+||++++.+++.+..... .+.++|+| ....+++| ++|..++.||++....|+... .+|.+.|..+.|+|.
T Consensus 211 sIvLyD~R~~~Pl~KVi~~mR--TN~IswnP-eafnF~~a---~ED~nlY~~DmR~l~~p~~v~-~dhvsAV~dVdfspt 283 (433)
T KOG0268|consen 211 SIVLYDLRQASPLKKVILTMR--TNTICWNP-EAFNFVAA---NEDHNLYTYDMRNLSRPLNVH-KDHVSAVMDVDFSPT 283 (433)
T ss_pred ceEEEecccCCccceeeeecc--ccceecCc-cccceeec---cccccceehhhhhhcccchhh-cccceeEEEeccCCC
Confidence 999999999998888765443 58899999 58888888 899999999999988877654 468899999999999
Q ss_pred CCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 322 TRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 322 ~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
|+.+ ++|+.|.+|+||.++.+.. +-+..-+.-..|.++.|+-|..+++++ |+.+|+|+...
T Consensus 284 G~Ef-vsgsyDksIRIf~~~~~~S--RdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~A 346 (433)
T KOG0268|consen 284 GQEF-VSGSYDKSIRIFPVNHGHS--RDIYHTKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKA 346 (433)
T ss_pred cchh-ccccccceEEEeecCCCcc--hhhhhHhhhheeeEEEEeccccEEEecCCCcceeeeecch
Confidence 9999 9999999999999998763 112222234669999999999999987 88999999776
|
|
| >KOG1407|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.7e-25 Score=184.90 Aligned_cols=274 Identities=21% Similarity=0.236 Sum_probs=209.5
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 82 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~ 82 (494)
+||.+.|.+|+|+. +|..|++|+.|++++ +|.....+.....+. ...
T Consensus 17 ~~~~~~v~Sv~wn~-~g~~lasgs~dktv~-v~n~e~~r~~~~~~~---~gh---------------------------- 63 (313)
T KOG1407|consen 17 QGHVQKVHSVAWNC-DGTKLASGSFDKTVS-VWNLERDRFRKELVY---RGH---------------------------- 63 (313)
T ss_pred hhhhhcceEEEEcc-cCceeeecccCCceE-EEEecchhhhhhhcc---cCC----------------------------
Confidence 68999999999999 999999999999999 887643321000000 000
Q ss_pred eccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCC
Q psy14130 83 PIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLS 162 (494)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~ 162 (494)
+....+..+-.-+|+.++.+ ++| .+|++||+..+
T Consensus 64 --------------------------------~~svdql~w~~~~~d~~ata---s~d--------k~ir~wd~r~~--- 97 (313)
T KOG1407|consen 64 --------------------------------TDSVDQLCWDPKHPDLFATA---SGD--------KTIRIWDIRSG--- 97 (313)
T ss_pred --------------------------------CcchhhheeCCCCCcceEEe---cCC--------ceEEEEEeccC---
Confidence 00001111111233333322 222 47999999998
Q ss_pred CCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCe
Q psy14130 163 GNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKT 242 (494)
Q Consensus 163 ~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~ 242 (494)
++........+ =.-+.|+|+| .+++.++.|..|.+.|.++.+.+...+ ..-.+..++|+.++.+++-....|+
T Consensus 98 ----k~~~~i~~~~e-ni~i~wsp~g-~~~~~~~kdD~it~id~r~~~~~~~~~-~~~e~ne~~w~~~nd~Fflt~GlG~ 170 (313)
T KOG1407|consen 98 ----KCTARIETKGE-NINITWSPDG-EYIAVGNKDDRITFIDARTYKIVNEEQ-FKFEVNEISWNNSNDLFFLTNGLGC 170 (313)
T ss_pred ----cEEEEeeccCc-ceEEEEcCCC-CEEEEecCcccEEEEEecccceeehhc-ccceeeeeeecCCCCEEEEecCCce
Confidence 66665553333 3468899998 699999999999999999888776665 5567888999988888888888899
Q ss_pred EEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCC
Q psy14130 243 VRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDT 322 (494)
Q Consensus 243 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 322 (494)
|.|...-.-++++.+.+|... ..++.|.|+ ++.+++| +.|-.+.+||+...-....+.. ..-+|+.+.|+.||
T Consensus 171 v~ILsypsLkpv~si~AH~sn-CicI~f~p~-GryfA~G---sADAlvSLWD~~ELiC~R~isR--ldwpVRTlSFS~dg 243 (313)
T KOG1407|consen 171 VEILSYPSLKPVQSIKAHPSN-CICIEFDPD-GRYFATG---SADALVSLWDVDELICERCISR--LDWPVRTLSFSHDG 243 (313)
T ss_pred EEEEeccccccccccccCCcc-eEEEEECCC-CceEeec---cccceeeccChhHhhhheeecc--ccCceEEEEeccCc
Confidence 999999999999999999977 889999998 7888999 8999999999987655444444 44689999999999
Q ss_pred CEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec
Q psy14130 323 RILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ 374 (494)
Q Consensus 323 ~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~ 374 (494)
++| ++|++|..|-|=++++|..+ .+.+..++...++|+|+..+++-+
T Consensus 244 ~~l-ASaSEDh~IDIA~vetGd~~----~eI~~~~~t~tVAWHPk~~LLAyA 290 (313)
T KOG1407|consen 244 RML-ASASEDHFIDIAEVETGDRV----WEIPCEGPTFTVAWHPKRPLLAYA 290 (313)
T ss_pred cee-eccCccceEEeEecccCCeE----EEeeccCCceeEEecCCCceeeEE
Confidence 999 99999999999999999864 344557889999999999988764
|
|
| >KOG0299|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.3e-25 Score=199.40 Aligned_cols=232 Identities=16% Similarity=0.199 Sum_probs=184.3
Q ss_pred cCCcEEEEEEc--CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEe
Q psy14130 138 AGGGAFLVLPI--HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVI 215 (494)
Q Consensus 138 ~~~g~~~~~~~--~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~ 215 (494)
+.+|.+++++. ..|.||+..+. +.++.+.+|.+.|.+++|-... +.|++++.|++|++|+++....+.++
T Consensus 211 S~Dgkylatgg~d~~v~Iw~~~t~-------ehv~~~~ghr~~V~~L~fr~gt-~~lys~s~Drsvkvw~~~~~s~vetl 282 (479)
T KOG0299|consen 211 SSDGKYLATGGRDRHVQIWDCDTL-------EHVKVFKGHRGAVSSLAFRKGT-SELYSASADRSVKVWSIDQLSYVETL 282 (479)
T ss_pred cCCCcEEEecCCCceEEEecCccc-------chhhcccccccceeeeeeecCc-cceeeeecCCceEEEehhHhHHHHHH
Confidence 34445544442 35889999998 7788899999999999998765 68999999999999999988888899
Q ss_pred cCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeC
Q psy14130 216 DCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDE 295 (494)
Q Consensus 216 ~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~ 295 (494)
-+|.+.|.+|.-..-++.+..|+.|+++++|++. .+....+.++.+. +-+++|..+ ..+++| +.+|.|.+|++
T Consensus 283 yGHqd~v~~IdaL~reR~vtVGgrDrT~rlwKi~-eesqlifrg~~~s-idcv~~In~--~HfvsG---SdnG~IaLWs~ 355 (479)
T KOG0299|consen 283 YGHQDGVLGIDALSRERCVTVGGRDRTVRLWKIP-EESQLIFRGGEGS-IDCVAFIND--EHFVSG---SDNGSIALWSL 355 (479)
T ss_pred hCCccceeeechhcccceEEeccccceeEEEecc-ccceeeeeCCCCC-eeeEEEecc--cceeec---cCCceEEEeee
Confidence 9999999999999888888888899999999994 3345566777776 888888876 455566 69999999999
Q ss_pred CCCCCceeEeeecCC-----------CceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEE
Q psy14130 296 NDLNTPLALETVDSS-----------SGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGF 364 (494)
Q Consensus 296 ~~~~~~~~~~~~~~~-----------~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~ 364 (494)
.+.+ |+......|. ..|++++..|...++ ++|+.+|.|++|-+..+-....++..+.-.+.|++++|
T Consensus 356 ~KKk-plf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~-asGS~~G~vrLW~i~~g~r~i~~l~~ls~~GfVNsl~f 433 (479)
T KOG0299|consen 356 LKKK-PLFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLL-ASGSWSGCVRLWKIEDGLRAINLLYSLSLVGFVNSLAF 433 (479)
T ss_pred cccC-ceeEeeccccccCCccccccccceeeeEecccCceE-EecCCCCceEEEEecCCccccceeeecccccEEEEEEE
Confidence 8744 4433332221 257889999988887 99999999999999998554566666666788999999
Q ss_pred ecCCceeeec----cceeEEEEeeCC
Q psy14130 365 MPKRGCDVTQ----CEIFRFFKLHTT 386 (494)
Q Consensus 365 ~p~~~~~~~~----~~~~~~~~l~~~ 386 (494)
+++|..++++ ....|.|.+...
T Consensus 434 ~~sgk~ivagiGkEhRlGRW~~~k~~ 459 (479)
T KOG0299|consen 434 SNSGKRIVAGIGKEHRLGRWWCLKSG 459 (479)
T ss_pred ccCCCEEEEecccccccceeeEeecc
Confidence 9999977665 334677776653
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-24 Score=212.56 Aligned_cols=206 Identities=16% Similarity=0.192 Sum_probs=162.8
Q ss_pred ecccccccEEEEEEcC-CCCCEEEEEeCCCeEEEEECCCC-------eEEEEecCCCCceEEEEEcCCC-CEEEEEeCCC
Q psy14130 171 DLHGHKRRVGYIEWHP-TAENVVASAGFDYLIILWDVGKG-------EALTVIDCHPDVINCLSFNRDG-SRLVTTCKDK 241 (494)
Q Consensus 171 ~~~~h~~~V~~~~~~p-~~~~~l~s~s~d~~v~iwd~~~~-------~~~~~~~~h~~~v~~l~~~~~~-~~l~s~~~d~ 241 (494)
.+.+|.+.|.+++|+| ++ ++|++|+.|++|++||+.++ .++..+.+|...|.+++|+|++ .+|++++.|+
T Consensus 70 ~l~GH~~~V~~v~fsP~d~-~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~Dg 148 (493)
T PTZ00421 70 ILLGQEGPIIDVAFNPFDP-QKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADM 148 (493)
T ss_pred eEeCCCCCEEEEEEcCCCC-CEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCC
Confidence 5789999999999999 55 79999999999999999764 3567889999999999999975 6999999999
Q ss_pred eEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCC-ceEEeEEeC
Q psy14130 242 TVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSS-GVLFPYYDH 320 (494)
Q Consensus 242 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~v~~~~~~~ 320 (494)
+|+|||+++++.+..+.+|... +.++.|+++ +.++++| +.|+.|++||+++........ .|.. ....+.|.+
T Consensus 149 tVrIWDl~tg~~~~~l~~h~~~-V~sla~spd-G~lLatg---s~Dg~IrIwD~rsg~~v~tl~--~H~~~~~~~~~w~~ 221 (493)
T PTZ00421 149 VVNVWDVERGKAVEVIKCHSDQ-ITSLEWNLD-GSLLCTT---SKDKKLNIIDPRDGTIVSSVE--AHASAKSQRCLWAK 221 (493)
T ss_pred EEEEEECCCCeEEEEEcCCCCc-eEEEEEECC-CCEEEEe---cCCCEEEEEECCCCcEEEEEe--cCCCCcceEEEEcC
Confidence 9999999999999999999887 999999998 5566666 699999999999865433222 2332 344678999
Q ss_pred CCCEEEEEE---eCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeee---ccceeEEEEeeC
Q psy14130 321 DTRILFLAG---KGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVT---QCEIFRFFKLHT 385 (494)
Q Consensus 321 ~~~~l~~~g---~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~---~~~~~~~~~l~~ 385 (494)
++..++.+| +.|+.|++||+++......... ......+....|+|++..++. +|+.+|+|++..
T Consensus 222 ~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~-~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~ 291 (493)
T PTZ00421 222 RKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVD-LDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMN 291 (493)
T ss_pred CCCeEEEEecCCCCCCeEEEEeCCCCCCceeEec-cCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeC
Confidence 988885555 3589999999987643222221 122334566678999876654 389999999987
|
|
| >KOG0282|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.1e-26 Score=208.57 Aligned_cols=245 Identities=18% Similarity=0.267 Sum_probs=194.7
Q ss_pred ccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeC
Q psy14130 118 AHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGF 197 (494)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~ 197 (494)
...+..+.+-|....+.++++-++ +|+||++-..+ .+++++.||..+|.+++|+++| ..+.|+|.
T Consensus 214 ~kgvsai~~fp~~~hLlLS~gmD~--------~vklW~vy~~~------~~lrtf~gH~k~Vrd~~~s~~g-~~fLS~sf 278 (503)
T KOG0282|consen 214 TKGVSAIQWFPKKGHLLLSGGMDG--------LVKLWNVYDDR------RCLRTFKGHRKPVRDASFNNCG-TSFLSASF 278 (503)
T ss_pred ccccchhhhccceeeEEEecCCCc--------eEEEEEEecCc------ceehhhhcchhhhhhhhccccC-Ceeeeeec
Confidence 344455555555445555544444 69999998742 7889999999999999999999 79999999
Q ss_pred CCeEEEEECCCCeEEEEecCCCCceEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCe
Q psy14130 198 DYLIILWDVGKGEALTVIDCHPDVINCLSFNRDG-SRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGR 276 (494)
Q Consensus 198 d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~-~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (494)
|+.|++||+++|+++..+. -...++++.|+|++ +.+++|+.|+.|+.||+|+++.++++..|-+. +..+.|.+++.+
T Consensus 279 D~~lKlwDtETG~~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~-i~~i~F~~~g~r 356 (503)
T KOG0282|consen 279 DRFLKLWDTETGQVLSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGA-ILDITFVDEGRR 356 (503)
T ss_pred ceeeeeeccccceEEEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhh-eeeeEEccCCce
Confidence 9999999999999999997 56788999999988 89999999999999999999999999999988 999999999777
Q ss_pred EEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCce--EEeccccc
Q psy14130 277 IVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPY--IHFLNQSL 354 (494)
Q Consensus 277 l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~--~~~~~~~~ 354 (494)
++++. +|+.++||+.+.... .............++..+|+++++ ++-+.|+.|.+|.+...-.+ .+....+.
T Consensus 357 FissS----Ddks~riWe~~~~v~-ik~i~~~~~hsmP~~~~~P~~~~~-~aQs~dN~i~ifs~~~~~r~nkkK~feGh~ 430 (503)
T KOG0282|consen 357 FISSS----DDKSVRIWENRIPVP-IKNIADPEMHTMPCLTLHPNGKWF-AAQSMDNYIAIFSTVPPFRLNKKKRFEGHS 430 (503)
T ss_pred Eeeec----cCccEEEEEcCCCcc-chhhcchhhccCcceecCCCCCee-hhhccCceEEEEecccccccCHhhhhccee
Confidence 77766 999999999876432 222222334567788999999999 88899999999997543211 11223344
Q ss_pred CCCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 355 SGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 355 ~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
..+--..+.|||||.+++++ ++.+.+|+..+
T Consensus 431 vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt 463 (503)
T KOG0282|consen 431 VAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKT 463 (503)
T ss_pred ccCceeeEEEcCCCCeEEeecCCccEEEeechh
Confidence 44556788999999999997 66777787766
|
|
| >KOG0305|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.1e-25 Score=208.63 Aligned_cols=220 Identities=20% Similarity=0.305 Sum_probs=189.0
Q ss_pred cCcEEEEEcCCCCCCCCcccceEeccc-ccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEE-ecCCCCceEEE
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHG-HKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTV-IDCHPDVINCL 225 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~-h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~-~~~h~~~v~~l 225 (494)
.+.|.|||..+. ..+..+.+ |...|.+++|+. ..+.+|+.|+.|..+|++..+.... +.+|...|..+
T Consensus 238 ~g~v~iwD~~~~-------k~~~~~~~~h~~rvg~laW~~---~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgL 307 (484)
T KOG0305|consen 238 DGTVQIWDVKEQ-------KKTRTLRGSHASRVGSLAWNS---SVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGL 307 (484)
T ss_pred CCeEEEEehhhc-------cccccccCCcCceeEEEeccC---ceEEEecCCCcEEEEEEecchhhhhhhhcccceeeee
Confidence 347999999888 55567777 999999999992 5899999999999999998875555 88999999999
Q ss_pred EEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEe
Q psy14130 226 SFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALE 305 (494)
Q Consensus 226 ~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~ 305 (494)
.|++|+.++|+|+.|+.+.|||....++...+..|... +..++|+|-...+||+| .++.|+.|++||..++.. +.
T Consensus 308 kws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aA-VKA~awcP~q~~lLAsG-GGs~D~~i~fwn~~~g~~---i~ 382 (484)
T KOG0305|consen 308 KWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAA-VKALAWCPWQSGLLATG-GGSADRCIKFWNTNTGAR---ID 382 (484)
T ss_pred EECCCCCeeccCCCccceEeccCCCccccEEEecccee-eeEeeeCCCccCceEEc-CCCcccEEEEEEcCCCcE---ec
Confidence 99999999999999999999999888899999999998 99999999988999998 557899999999987654 45
Q ss_pred eecCCCceEEeEEeCCCCEEEEE-EeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEE
Q psy14130 306 TVDSSSGVLFPYYDHDTRILFLA-GKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFK 382 (494)
Q Consensus 306 ~~~~~~~v~~~~~~~~~~~l~~~-g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~ 382 (494)
..+....|..+.|++..+.|+.+ |-.++.|.||++.+-+....+ .. |...|..++++|||..++++ ||++|+|+
T Consensus 383 ~vdtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l-~g--H~~RVl~la~SPdg~~i~t~a~DETlrfw~ 459 (484)
T KOG0305|consen 383 SVDTGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAEL-LG--HTSRVLYLALSPDGETIVTGAADETLRFWN 459 (484)
T ss_pred ccccCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeeee-cC--CcceeEEEEECCCCCEEEEecccCcEEecc
Confidence 56677899999999999877444 556778999999986654333 23 36779999999999988874 99999999
Q ss_pred eeC
Q psy14130 383 LHT 385 (494)
Q Consensus 383 l~~ 385 (494)
+..
T Consensus 460 ~f~ 462 (484)
T KOG0305|consen 460 LFD 462 (484)
T ss_pred ccC
Confidence 887
|
|
| >KOG0276|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=4e-25 Score=206.95 Aligned_cols=218 Identities=16% Similarity=0.215 Sum_probs=191.1
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcC
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNR 229 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~ 229 (494)
+|.||+.++. ..+..+.-..-+|.+..|-+.. +.+++|+.|..|++++..+++.+..|..|.+.|.+++.+|
T Consensus 36 ~V~IWnyetq-------tmVksfeV~~~PvRa~kfiaRk-nWiv~GsDD~~IrVfnynt~ekV~~FeAH~DyIR~iavHP 107 (794)
T KOG0276|consen 36 DVQIWNYETQ-------TMVKSFEVSEVPVRAAKFIARK-NWIVTGSDDMQIRVFNYNTGEKVKTFEAHSDYIRSIAVHP 107 (794)
T ss_pred eeEEEecccc-------eeeeeeeecccchhhheeeecc-ceEEEecCCceEEEEecccceeeEEeeccccceeeeeecC
Confidence 6999999988 5555666677889999999886 7999999999999999999999999999999999999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCC-ceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec
Q psy14130 230 DGSRLVTTCKDKTVRVLDPRTG-LVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD 308 (494)
Q Consensus 230 ~~~~l~s~~~d~~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~ 308 (494)
...+++|+|.|-+|++||-+.. .+.+++.+|... +..++|.|.+..-++++ +-|++|++|.+.+.....++. .
T Consensus 108 t~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~Hy-VMqv~fnPkD~ntFaS~---sLDrTVKVWslgs~~~nfTl~--g 181 (794)
T KOG0276|consen 108 TLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHY-VMQVAFNPKDPNTFASA---SLDRTVKVWSLGSPHPNFTLE--G 181 (794)
T ss_pred CCCeEEecCCccEEEEeeccCceeeeeEEcCcceE-EEEEEecCCCccceeee---eccccEEEEEcCCCCCceeee--c
Confidence 9999999999999999998765 488999999998 99999999999999999 899999999998766555554 5
Q ss_pred CCCceEEeEEeCCC--CEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEee
Q psy14130 309 SSSGVLFPYYDHDT--RILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLH 384 (494)
Q Consensus 309 ~~~~v~~~~~~~~~--~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~ 384 (494)
|..+|.++.|-+.| .+| ++|+.|.+|++||.++..++.. +..| ...|..++|+|.-..++++ |+++|+|.-.
T Consensus 182 HekGVN~Vdyy~~gdkpyl-IsgaDD~tiKvWDyQtk~CV~T-LeGH--t~Nvs~v~fhp~lpiiisgsEDGTvriWhs~ 257 (794)
T KOG0276|consen 182 HEKGVNCVDYYTGGDKPYL-ISGADDLTIKVWDYQTKSCVQT-LEGH--TNNVSFVFFHPELPIIISGSEDGTVRIWNSK 257 (794)
T ss_pred cccCcceEEeccCCCcceE-EecCCCceEEEeecchHHHHHH-hhcc--cccceEEEecCCCcEEEEecCCccEEEecCc
Confidence 77899999998755 577 9999999999999999988543 3444 4569999999999999886 9999999865
Q ss_pred C
Q psy14130 385 T 385 (494)
Q Consensus 385 ~ 385 (494)
+
T Consensus 258 T 258 (794)
T KOG0276|consen 258 T 258 (794)
T ss_pred c
Confidence 4
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.2e-24 Score=199.11 Aligned_cols=175 Identities=26% Similarity=0.504 Sum_probs=151.8
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.|.+||+.+. +....+..|...|.+++|+|++ .++++++.|+.|++||+++++.+..+..|...|.++.|+
T Consensus 115 ~~i~~~~~~~~-------~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~ 186 (289)
T cd00200 115 KTIKVWDVETG-------KCLTTLRGHTDWVNSVAFSPDG-TFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFS 186 (289)
T ss_pred CeEEEEECCCc-------EEEEEeccCCCcEEEEEEcCcC-CEEEEEcCCCcEEEEEccccccceeEecCccccceEEEC
Confidence 47999999876 5666777899999999999996 688888889999999999898888899999999999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD 308 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~ 308 (494)
|+++.+++++.|+.|++||++.++.+..+..|... +..+.|.++ +.+++++ +.++.|++||+.+......+. .
T Consensus 187 ~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~-i~~~~~~~~-~~~~~~~---~~~~~i~i~~~~~~~~~~~~~--~ 259 (289)
T cd00200 187 PDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENG-VNSVAFSPD-GYLLASG---SEDGTIRVWDLRTGECVQTLS--G 259 (289)
T ss_pred CCcCEEEEecCCCcEEEEECCCCceecchhhcCCc-eEEEEEcCC-CcEEEEE---cCCCcEEEEEcCCceeEEEcc--c
Confidence 99999999999999999999999988888788776 899999998 7777777 569999999998654333322 4
Q ss_pred CCCceEEeEEeCCCCEEEEEEeCCCcEEEEE
Q psy14130 309 SSSGVLFPYYDHDTRILFLAGKGDGNIRYYE 339 (494)
Q Consensus 309 ~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd 339 (494)
+...+.++.|+|+++.+ ++++.||.|++|+
T Consensus 260 ~~~~i~~~~~~~~~~~l-~~~~~d~~i~iw~ 289 (289)
T cd00200 260 HTNSVTSLAWSPDGKRL-ASGSADGTIRIWD 289 (289)
T ss_pred cCCcEEEEEECCCCCEE-EEecCCCeEEecC
Confidence 55789999999999988 8888999999996
|
|
| >KOG0305|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.1e-25 Score=206.96 Aligned_cols=245 Identities=20% Similarity=0.341 Sum_probs=190.5
Q ss_pred cccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEEec
Q psy14130 5 YRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPI 84 (494)
Q Consensus 5 H~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~ 84 (494)
+...|++|.|++ +|.+|++|..+|.|. +|+....+.... +...
T Consensus 216 ~~~~vtSv~ws~-~G~~LavG~~~g~v~-iwD~~~~k~~~~--~~~~--------------------------------- 258 (484)
T KOG0305|consen 216 GEELVTSVKWSP-DGSHLAVGTSDGTVQ-IWDVKEQKKTRT--LRGS--------------------------------- 258 (484)
T ss_pred CCCceEEEEECC-CCCEEEEeecCCeEE-EEehhhcccccc--ccCC---------------------------------
Confidence 478899999999 899999999999998 887644332111 0000
Q ss_pred cccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCCCC
Q psy14130 85 HRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLSGN 164 (494)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~~~ 164 (494)
....+..++|+...+. .++.+ +.|..+|+.....
T Consensus 259 --------------------------------h~~rvg~laW~~~~ls---sGsr~--------~~I~~~dvR~~~~--- 292 (484)
T KOG0305|consen 259 --------------------------------HASRVGSLAWNSSVLS---SGSRD--------GKILNHDVRISQH--- 292 (484)
T ss_pred --------------------------------cCceeEEEeccCceEE---EecCC--------CcEEEEEEecchh---
Confidence 0112223334422221 22333 3699999988742
Q ss_pred cccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcC-CCCEEEEEe--CCC
Q psy14130 165 LNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNR-DGSRLVTTC--KDK 241 (494)
Q Consensus 165 ~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~-~~~~l~s~~--~d~ 241 (494)
....+.+|...|..++|++++ ++||+|+.|+.+.|||....+++..+..|...|..++|+| ...+||+|+ .|+
T Consensus 293 ---~~~~~~~H~qeVCgLkws~d~-~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~ 368 (484)
T KOG0305|consen 293 ---VVSTLQGHRQEVCGLKWSPDG-NQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADR 368 (484)
T ss_pred ---hhhhhhcccceeeeeEECCCC-CeeccCCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCccc
Confidence 122488999999999999998 8999999999999999988889999999999999999999 667899876 699
Q ss_pred eEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEE-EecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeC
Q psy14130 242 TVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTT-GFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDH 320 (494)
Q Consensus 242 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~ 320 (494)
.|++||+.+++.+..+.... +|..+.|++..+.++++ | ..+..|.||+..+...... ...|...|..++++|
T Consensus 369 ~i~fwn~~~g~~i~~vdtgs--QVcsL~Wsk~~kEi~sthG---~s~n~i~lw~~ps~~~~~~--l~gH~~RVl~la~SP 441 (484)
T KOG0305|consen 369 CIKFWNTNTGARIDSVDTGS--QVCSLIWSKKYKELLSTHG---YSENQITLWKYPSMKLVAE--LLGHTSRVLYLALSP 441 (484)
T ss_pred EEEEEEcCCCcEecccccCC--ceeeEEEcCCCCEEEEecC---CCCCcEEEEeccccceeee--ecCCcceeEEEEECC
Confidence 99999999999888876443 48999999997777666 5 4677999999987544333 345778899999999
Q ss_pred CCCEEEEEEeCCCcEEEEEeeCCC
Q psy14130 321 DTRILFLAGKGDGNIRYYELTNER 344 (494)
Q Consensus 321 ~~~~l~~~g~~dg~i~~wd~~~~~ 344 (494)
||..+ ++|+.|.++++|++-...
T Consensus 442 dg~~i-~t~a~DETlrfw~~f~~~ 464 (484)
T KOG0305|consen 442 DGETI-VTGAADETLRFWNLFDER 464 (484)
T ss_pred CCCEE-EEecccCcEEeccccCCC
Confidence 99999 999999999999997753
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.8e-23 Score=220.17 Aligned_cols=226 Identities=17% Similarity=0.295 Sum_probs=177.3
Q ss_pred cCcEEEEEcCCCCCC-CCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEE
Q psy14130 148 IHRVKLWYIPDGGLS-GNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLS 226 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~-~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~ 226 (494)
++.|+||++...... .....+...+. +...|.+++|+|....+|++++.||+|++||+.+++.+..+.+|.+.|++++
T Consensus 504 D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~ 582 (793)
T PLN00181 504 NKKIKIFECESIIKDGRDIHYPVVELA-SRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSID 582 (793)
T ss_pred CCEEEEEECCcccccccccccceEEec-ccCceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEE
Confidence 457999997642110 01112333444 3467999999986557999999999999999999999999999999999999
Q ss_pred EcC-CCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEe
Q psy14130 227 FNR-DGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALE 305 (494)
Q Consensus 227 ~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~ 305 (494)
|+| ++.+|++|+.|++|++||++++..+..+..+. . +.++.|.++++.++++| +.|+.|++||+++...+...
T Consensus 583 ~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~~-~-v~~v~~~~~~g~~latg---s~dg~I~iwD~~~~~~~~~~- 656 (793)
T PLN00181 583 YSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKA-N-ICCVQFPSESGRSLAFG---SADHKVYYYDLRNPKLPLCT- 656 (793)
T ss_pred EcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecCC-C-eEEEEEeCCCCCEEEEE---eCCCeEEEEECCCCCccceE-
Confidence 997 78999999999999999999999888887653 3 78888977768888888 79999999999875533322
Q ss_pred eecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCC------CceEEecccccCCCCeeEEEEecCCceeeec--cce
Q psy14130 306 TVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNE------RPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEI 377 (494)
Q Consensus 306 ~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~------~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~ 377 (494)
...|...|.++.|. ++..| ++++.|+.|++||++.+ +++.. +.. +...+..++|+|++.+++++ |+.
T Consensus 657 ~~~h~~~V~~v~f~-~~~~l-vs~s~D~~ikiWd~~~~~~~~~~~~l~~-~~g--h~~~i~~v~~s~~~~~lasgs~D~~ 731 (793)
T PLN00181 657 MIGHSKTVSYVRFV-DSSTL-VSSSTDNTLKLWDLSMSISGINETPLHS-FMG--HTNVKNFVGLSVSDGYIATGSETNE 731 (793)
T ss_pred ecCCCCCEEEEEEe-CCCEE-EEEECCCEEEEEeCCCCccccCCcceEE-EcC--CCCCeeEEEEcCCCCEEEEEeCCCE
Confidence 23466789999997 67777 89999999999999753 23222 222 35678899999999988886 899
Q ss_pred eEEEEeeC
Q psy14130 378 FRFFKLHT 385 (494)
Q Consensus 378 ~~~~~l~~ 385 (494)
+++|+...
T Consensus 732 v~iw~~~~ 739 (793)
T PLN00181 732 VFVYHKAF 739 (793)
T ss_pred EEEEECCC
Confidence 99999765
|
|
| >KOG0274|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.8e-24 Score=212.75 Aligned_cols=179 Identities=22% Similarity=0.387 Sum_probs=149.4
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
.+|++|+++++ ..+..+.+|...|.++..+ + .++++|+.|++|++||+.+++++.++.+|...|+++.+.
T Consensus 311 ~tVkVW~v~n~-------~~l~l~~~h~~~V~~v~~~--~-~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~~ 380 (537)
T KOG0274|consen 311 NTVKVWDVTNG-------ACLNLLRGHTGPVNCVQLD--E-PLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYSLIVD 380 (537)
T ss_pred ceEEEEeccCc-------ceEEEeccccccEEEEEec--C-CEEEEEecCceEEEEEhhhceeeeeecCCcceEEEEEec
Confidence 47999999988 7888899999999999999 3 699999999999999999999999999999999999887
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCC-ceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTG-LVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV 307 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~ 307 (494)
+. ..+++|+.|++|++||+++. +++..+.+|... +..+.+. ..++.++ +.|++|++||..+......+...
T Consensus 381 ~~-~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~-v~~l~~~---~~~Lvs~---~aD~~Ik~WD~~~~~~~~~~~~~ 452 (537)
T KOG0274|consen 381 SE-NRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSL-VSSLLLR---DNFLVSS---SADGTIKLWDAEEGECLRTLEGR 452 (537)
T ss_pred Cc-ceEEeeeeccceEeecCCchhhhhhhhcCCccc-ccccccc---cceeEec---cccccEEEeecccCceeeeeccC
Confidence 65 89999999999999999999 899999999886 5444443 3455555 58999999999887664444332
Q ss_pred cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEe
Q psy14130 308 DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHF 349 (494)
Q Consensus 308 ~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~ 349 (494)
+...+..+++. ...+ ++++.||++++||+++++.....
T Consensus 453 -~~~~v~~l~~~--~~~i-l~s~~~~~~~l~dl~~~~~~~~l 490 (537)
T KOG0274|consen 453 -HVGGVSALALG--KEEI-LCSSDDGSVKLWDLRSGTLIRTL 490 (537)
T ss_pred -CcccEEEeecC--cceE-EEEecCCeeEEEecccCchhhhh
Confidence 34677777665 3444 78889999999999999876554
|
|
| >KOG0301|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.2e-24 Score=202.65 Aligned_cols=208 Identities=15% Similarity=0.231 Sum_probs=174.6
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
..|.+|..... .++..|.||+..|+|+....++ . ++|||.|.++++|-. +++...+++|+..|++++.-
T Consensus 81 ~~i~v~~~~~~-------~P~~~LkgH~snVC~ls~~~~~-~-~iSgSWD~TakvW~~--~~l~~~l~gH~asVWAv~~l 149 (745)
T KOG0301|consen 81 TTIIVFKLSQA-------EPLYTLKGHKSNVCSLSIGEDG-T-LISGSWDSTAKVWRI--GELVYSLQGHTASVWAVASL 149 (745)
T ss_pred ceEEEEecCCC-------CchhhhhccccceeeeecCCcC-c-eEecccccceEEecc--hhhhcccCCcchheeeeeec
Confidence 35889998888 8899999999999999988886 3 999999999999986 56777799999999999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD 308 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~ 308 (494)
|++ .++|||.|++|++|.- ++.++++.+|... +..++..++ ..+++++ .||.|++|++.. ... ....+
T Consensus 150 ~e~-~~vTgsaDKtIklWk~--~~~l~tf~gHtD~-VRgL~vl~~-~~flScs----NDg~Ir~w~~~g-e~l--~~~~g 217 (745)
T KOG0301|consen 150 PEN-TYVTGSADKTIKLWKG--GTLLKTFSGHTDC-VRGLAVLDD-SHFLSCS----NDGSIRLWDLDG-EVL--LEMHG 217 (745)
T ss_pred CCC-cEEeccCcceeeeccC--Cchhhhhccchhh-eeeeEEecC-CCeEeec----CCceEEEEeccC-cee--eeeec
Confidence 988 8999999999999974 7789999999998 889999887 6788888 899999999943 333 34456
Q ss_pred CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeee-ccceeEEEEeeC
Q psy14130 309 SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVT-QCEIFRFFKLHT 385 (494)
Q Consensus 309 ~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~-~~~~~~~~~l~~ 385 (494)
|.+-+.++.+.+++..+ +++++|+++++|+.. ++.+.+ .. ....++++++.++|...+. +|+.+|+|-...
T Consensus 218 htn~vYsis~~~~~~~I-vs~gEDrtlriW~~~--e~~q~I-~l--PttsiWsa~~L~NgDIvvg~SDG~VrVfT~~k 289 (745)
T KOG0301|consen 218 HTNFVYSISMALSDGLI-VSTGEDRTLRIWKKD--ECVQVI-TL--PTTSIWSAKVLLNGDIVVGGSDGRVRVFTVDK 289 (745)
T ss_pred cceEEEEEEecCCCCeE-EEecCCceEEEeecC--ceEEEE-ec--CccceEEEEEeeCCCEEEeccCceEEEEEecc
Confidence 77889999988888888 888999999999987 332222 11 1347999999998887766 599999998774
|
|
| >KOG0308|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.6e-25 Score=205.77 Aligned_cols=222 Identities=23% Similarity=0.318 Sum_probs=176.7
Q ss_pred EcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEE-cCCCCCEEEEEeCCCeEEEEECCCCe--EE--------EEe
Q psy14130 147 PIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEW-HPTAENVVASAGFDYLIILWDVGKGE--AL--------TVI 215 (494)
Q Consensus 147 ~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~-~p~~~~~l~s~s~d~~v~iwd~~~~~--~~--------~~~ 215 (494)
.+.+|++|+...+.. -+..++..|.+.|.|++. -++. .++|||+.|+.|.+||++++. .+ ..+
T Consensus 93 sDtTVK~W~~~~~~~-----~c~stir~H~DYVkcla~~ak~~-~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl 166 (735)
T KOG0308|consen 93 SDTTVKVWNAHKDNT-----FCMSTIRTHKDYVKCLAYIAKNN-ELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSL 166 (735)
T ss_pred CCceEEEeecccCcc-----hhHhhhhcccchheeeeecccCc-eeEEecCCCccEEEEEccCcchhhhhhccccccccC
Confidence 334799999887641 456678889999999999 6665 699999999999999999772 22 223
Q ss_pred c-CCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEe
Q psy14130 216 D-CHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWD 294 (494)
Q Consensus 216 ~-~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd 294 (494)
. ++...|++++.++.|..|++|+..+.+++||+++++.+..+.+|... +..+..++++.++++++ +||+|++||
T Consensus 167 ~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLrGHTdN-Vr~ll~~dDGt~~ls~s----SDgtIrlWd 241 (735)
T KOG0308|consen 167 GSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDN-VRVLLVNDDGTRLLSAS----SDGTIRLWD 241 (735)
T ss_pred CCCCccceeeeecCCcceEEEecCcccceEEeccccccceeeeeccccc-eEEEEEcCCCCeEeecC----CCceEEeee
Confidence 3 78899999999999999999999999999999999999999999998 88888888877777776 899999999
Q ss_pred CCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecC-Cc-eee
Q psy14130 295 ENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPK-RG-CDV 372 (494)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~-~~-~~~ 372 (494)
+...+....+. -|..+|.++..+|+-..+ .+|+.||.|..=|+++...... + ++...||..+..+.+ .. ...
T Consensus 242 LgqQrCl~T~~--vH~e~VWaL~~~~sf~~v-YsG~rd~~i~~Tdl~n~~~~tl-i--ck~daPv~~l~~~~~~~~~Wvt 315 (735)
T KOG0308|consen 242 LGQQRCLATYI--VHKEGVWALQSSPSFTHV-YSGGRDGNIYRTDLRNPAKSTL-I--CKEDAPVLKLHLHEHDNSVWVT 315 (735)
T ss_pred ccccceeeeEE--eccCceEEEeeCCCcceE-EecCCCCcEEecccCCchhheE-e--ecCCCchhhhhhccccCCceee
Confidence 98766655443 366779999999999998 7899999999999998543222 2 222466777777632 22 445
Q ss_pred eccceeEEEEeeC
Q psy14130 373 TQCEIFRFFKLHT 385 (494)
Q Consensus 373 ~~~~~~~~~~l~~ 385 (494)
+.|+.++-|.+..
T Consensus 316 Ttds~I~rW~~~~ 328 (735)
T KOG0308|consen 316 TTDSSIKRWKLEP 328 (735)
T ss_pred eccccceecCCcc
Confidence 5688888887655
|
|
| >KOG1332|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.9e-24 Score=179.41 Aligned_cols=220 Identities=16% Similarity=0.210 Sum_probs=166.6
Q ss_pred cceEecccccccEEEEEE-cCCCCCEEEEEeCCCeEEEEECCCCe--EEEEecCCCCceEEEEEcCC--CCEEEEEeCCC
Q psy14130 167 EWIMDLHGHKRRVGYIEW-HPTAENVVASAGFDYLIILWDVGKGE--ALTVIDCHPDVINCLSFNRD--GSRLVTTCKDK 241 (494)
Q Consensus 167 ~~~~~~~~h~~~V~~~~~-~p~~~~~l~s~s~d~~v~iwd~~~~~--~~~~~~~h~~~v~~l~~~~~--~~~l~s~~~d~ 241 (494)
..+.+|.||.++|..++| ||.-..+||+++.||.|.||.-++++ .......|...|++++|.|. |-.|++++.||
T Consensus 47 ~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG 126 (299)
T KOG1332|consen 47 KLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDG 126 (299)
T ss_pred eeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCC
Confidence 456688999999999999 55444899999999999999988774 34456789999999999995 66899999999
Q ss_pred eEEEEeCCCC-c--eEEEeeecCCCCceEEEEECC---C----------CeEEEEEecCCCCceEEEEeCCCCCCceeEe
Q psy14130 242 TVRVLDPRTG-L--VISQGVCHPGTRSSKAVFIGD---T----------GRIVTTGFSRHSDRQVGLWDENDLNTPLALE 305 (494)
Q Consensus 242 ~v~iwd~~~~-~--~~~~~~~~~~~~~~~~~~~~~---~----------~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~ 305 (494)
.|.|.+.++. . ......+|.-. ++++.|.|. + -+-|++| +.|..|+||+..+..-.....
T Consensus 127 ~vsvl~~~~~g~w~t~ki~~aH~~G-vnsVswapa~~~g~~~~~~~~~~~krlvSg---GcDn~VkiW~~~~~~w~~e~~ 202 (299)
T KOG1332|consen 127 KVSVLTYDSSGGWTTSKIVFAHEIG-VNSVSWAPASAPGSLVDQGPAAKVKRLVSG---GCDNLVKIWKFDSDSWKLERT 202 (299)
T ss_pred cEEEEEEcCCCCccchhhhhccccc-cceeeecCcCCCccccccCcccccceeecc---CCccceeeeecCCcchhhhhh
Confidence 9999998765 2 33445678877 899999886 2 0234555 589999999988753333222
Q ss_pred eecCCCceEEeEEeCCC---CEEEEEEeCCCcEEEEEeeCCC-c-eEEecccccCCCCeeEEEEecCCceeeec--ccee
Q psy14130 306 TVDSSSGVLFPYYDHDT---RILFLAGKGDGNIRYYELTNER-P-YIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIF 378 (494)
Q Consensus 306 ~~~~~~~v~~~~~~~~~---~~l~~~g~~dg~i~~wd~~~~~-~-~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~ 378 (494)
.-+|..-|+.++|.|.- +..+++++.||++.||-.+... + ..+++.. .+.++..+.|++.|..++.+ |..+
T Consensus 203 l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~e~wk~tll~~--f~~~~w~vSWS~sGn~LaVs~GdNkv 280 (299)
T KOG1332|consen 203 LEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEYEPWKKTLLEE--FPDVVWRVSWSLSGNILAVSGGDNKV 280 (299)
T ss_pred hhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCccCccccccccc--CCcceEEEEEeccccEEEEecCCcEE
Confidence 33577889999999964 3334999999999999887432 1 1223333 36789999999999988774 7889
Q ss_pred EEEEeeCCCCeEEEe
Q psy14130 379 RFFKLHTTRNMCEPI 393 (494)
Q Consensus 379 ~~~~l~~~~~~~~~~ 393 (494)
.+|+-+. ++..+++
T Consensus 281 tlwke~~-~Gkw~~v 294 (299)
T KOG1332|consen 281 TLWKENV-DGKWEEV 294 (299)
T ss_pred EEEEeCC-CCcEEEc
Confidence 9998766 4455544
|
|
| >KOG0296|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-23 Score=184.61 Aligned_cols=243 Identities=17% Similarity=0.198 Sum_probs=184.3
Q ss_pred CccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEe
Q psy14130 117 NAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAG 196 (494)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s 196 (494)
+......+..+|+...++..+.+ +...||++.++ +....+.+|+..|+++.|+.+| .+||||.
T Consensus 63 H~~svFavsl~P~~~l~aTGGgD---------D~AflW~~~~g-------e~~~eltgHKDSVt~~~Fshdg-tlLATGd 125 (399)
T KOG0296|consen 63 HTDSVFAVSLHPNNNLVATGGGD---------DLAFLWDISTG-------EFAGELTGHKDSVTCCSFSHDG-TLLATGD 125 (399)
T ss_pred cCCceEEEEeCCCCceEEecCCC---------ceEEEEEccCC-------cceeEecCCCCceEEEEEccCc-eEEEecC
Confidence 33445556667755444443222 36899999999 6778999999999999999998 7999999
Q ss_pred CCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCe
Q psy14130 197 FDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGR 276 (494)
Q Consensus 197 ~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (494)
.+|.|+||+..++.....+...-+.|.-+.|+|.+..|+.|+.||.+.+|.+.++...+.+.+|... +.+-.|.|+ ++
T Consensus 126 msG~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~-ct~G~f~pd-GK 203 (399)
T KOG0296|consen 126 MSGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSP-CTCGEFIPD-GK 203 (399)
T ss_pred CCccEEEEEcccCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecCCCCC-cccccccCC-Cc
Confidence 9999999999999988888766677888999999999999999999999999998888999999888 888899999 55
Q ss_pred EEEEEecCCCCceEEEEeCCCCCCceeEeeec------------------------------------------------
Q psy14130 277 IVTTGFSRHSDRQVGLWDENDLNTPLALETVD------------------------------------------------ 308 (494)
Q Consensus 277 l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~------------------------------------------------ 308 (494)
.+.+| ..||+|++||+.+..........+
T Consensus 204 r~~tg---y~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~ 280 (399)
T KOG0296|consen 204 RILTG---YDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKP 280 (399)
T ss_pred eEEEE---ecCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccc
Confidence 55666 389999999998754322221000
Q ss_pred -CCCceEEe---EEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecC-CceeeeccceeEEEEe
Q psy14130 309 -SSSGVLFP---YYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPK-RGCDVTQCEIFRFFKL 383 (494)
Q Consensus 309 -~~~~v~~~---~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~-~~~~~~~~~~~~~~~l 383 (494)
+...+.++ .++..-. |+++|+-||+|.|||+...+. + ....+..+|..+.|.++ ..+.++.++.+|.|+.
T Consensus 281 ~~e~~~esve~~~~ss~lp-L~A~G~vdG~i~iyD~a~~~~-R---~~c~he~~V~~l~w~~t~~l~t~c~~g~v~~wDa 355 (399)
T KOG0296|consen 281 SQEELDESVESIPSSSKLP-LAACGSVDGTIAIYDLAASTL-R---HICEHEDGVTKLKWLNTDYLLTACANGKVRQWDA 355 (399)
T ss_pred cchhhhhhhhhcccccccc-hhhcccccceEEEEecccchh-h---eeccCCCceEEEEEcCcchheeeccCceEEeeec
Confidence 00011112 2222223 358999999999999998764 2 22345677999999993 3334446999999999
Q ss_pred eCC
Q psy14130 384 HTT 386 (494)
Q Consensus 384 ~~~ 386 (494)
.++
T Consensus 356 RtG 358 (399)
T KOG0296|consen 356 RTG 358 (399)
T ss_pred ccc
Confidence 884
|
|
| >KOG0300|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.4e-24 Score=185.34 Aligned_cols=208 Identities=22% Similarity=0.334 Sum_probs=170.2
Q ss_pred cceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEE
Q psy14130 167 EWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVL 246 (494)
Q Consensus 167 ~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iw 246 (494)
.++..+.||...|.+..|-..| ..++++|.|.+..+||+++++.+..+.+|....+.++-+|..+++++++.|.+.++|
T Consensus 263 vPl~~ltgH~~vV~a~dWL~gg-~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLW 341 (481)
T KOG0300|consen 263 VPLMRLTGHRAVVSACDWLAGG-QQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLW 341 (481)
T ss_pred eeeeeeeccccceEehhhhcCc-ceeeeeeccccceeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEec
Confidence 5677899999999999999988 699999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCc-eEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEE
Q psy14130 247 DPRTGL-VISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRIL 325 (494)
Q Consensus 247 d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 325 (494)
|.+..- .+..|.+|... +.++.|..+ .+ +++| +.|++|++||+++.+.++.... ....+..++.+..+..+
T Consensus 342 DFReaI~sV~VFQGHtdt-VTS~vF~~d-d~-vVSg---SDDrTvKvWdLrNMRsplATIR--tdS~~NRvavs~g~~iI 413 (481)
T KOG0300|consen 342 DFREAIQSVAVFQGHTDT-VTSVVFNTD-DR-VVSG---SDDRTVKVWDLRNMRSPLATIR--TDSPANRVAVSKGHPII 413 (481)
T ss_pred cchhhcceeeeecccccc-eeEEEEecC-Cc-eeec---CCCceEEEeeeccccCcceeee--cCCccceeEeecCCceE
Confidence 998543 57788999998 999999876 34 4556 6999999999999888876544 45678888898877777
Q ss_pred EEEEeCCCcEEEEEeeCCCceEEec--ccccCCCCeeEEEEecC---Cceeeec-cceeEEEEeeC
Q psy14130 326 FLAGKGDGNIRYYELTNERPYIHFL--NQSLSGAPQRGLGFMPK---RGCDVTQ-CEIFRFFKLHT 385 (494)
Q Consensus 326 ~~~g~~dg~i~~wd~~~~~~~~~~~--~~~~~~~~v~~~~~~p~---~~~~~~~-~~~~~~~~l~~ 385 (494)
+.--....|++||+...+. .++- ....+..-|.+.+|..+ ..++.++ |..+--|+++.
T Consensus 414 -AiPhDNRqvRlfDlnG~Rl-aRlPrtsRqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW~in~ 477 (481)
T KOG0300|consen 414 -AIPHDNRQVRLFDLNGNRL-ARLPRTSRQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGWKINT 477 (481)
T ss_pred -EeccCCceEEEEecCCCcc-ccCCcccccccceeeeeeeccccCcccccccccccceeeeeEecc
Confidence 6666777899999987653 2221 12233456899999754 3445555 77788898876
|
|
| >KOG0306|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-22 Score=193.57 Aligned_cols=231 Identities=19% Similarity=0.253 Sum_probs=183.4
Q ss_pred EEEEEcCcEEEEEcCCCCCC--CCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCC
Q psy14130 143 FLVLPIHRVKLWYIPDGGLS--GNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPD 220 (494)
Q Consensus 143 ~~~~~~~~v~iw~~~~~~~~--~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~ 220 (494)
+.....+++.+|.++..... ........++.||...|.+++++.+. ..++||+ .+.+++|+..+.++++++.. +
T Consensus 338 lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRsl~vS~d~-~~~~Sga-~~SikiWn~~t~kciRTi~~--~ 413 (888)
T KOG0306|consen 338 LVLLANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVRSLCVSSDS-ILLASGA-GESIKIWNRDTLKCIRTITC--G 413 (888)
T ss_pred EEEeecCceEEEEeccCCCCCccccccceeeeccchhheeEEEeecCc-eeeeecC-CCcEEEEEccCcceeEEecc--c
Confidence 44456677888887762111 11111124667999999999999986 4666665 57899999999999999985 3
Q ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCC--
Q psy14130 221 VINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDL-- 298 (494)
Q Consensus 221 ~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~-- 298 (494)
.+.+..|-|.++++++|.+.|.+.+||+.+...+.+..+|.+. +..+...|++..++++| .|.+|++||..-.
T Consensus 414 y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHdga-IWsi~~~pD~~g~vT~s----aDktVkfWdf~l~~~ 488 (888)
T KOG0306|consen 414 YILASKFVPGDRYIVLGTKNGELQVFDLASASLVETIRAHDGA-IWSISLSPDNKGFVTGS----ADKTVKFWDFKLVVS 488 (888)
T ss_pred cEEEEEecCCCceEEEeccCCceEEEEeehhhhhhhhhccccc-eeeeeecCCCCceEEec----CCcEEEEEeEEEEec
Confidence 8899999999999999999999999999999999999999998 99999999965555555 9999999996411
Q ss_pred ---CC--ce---eEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCce
Q psy14130 299 ---NT--PL---ALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGC 370 (494)
Q Consensus 299 ---~~--~~---~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 370 (494)
.+ .+ ....++-...|.++.+||||++| +.+--|+++++|-+.+-+- ++.-+.|.-||.++..+||..+
T Consensus 489 ~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~L-aVsLLdnTVkVyflDtlKF---flsLYGHkLPV~smDIS~DSkl 564 (888)
T KOG0306|consen 489 VPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLL-AVSLLDNTVKVYFLDTLKF---FLSLYGHKLPVLSMDISPDSKL 564 (888)
T ss_pred cCcccceeeeeccceEEeccccEEEEEEcCCCcEE-EEEeccCeEEEEEecceee---eeeecccccceeEEeccCCcCe
Confidence 11 01 11233455789999999999999 8888999999999998653 3455666789999999999999
Q ss_pred eeec--cceeEEEEeeCC
Q psy14130 371 DVTQ--CEIFRFFKLHTT 386 (494)
Q Consensus 371 ~~~~--~~~~~~~~l~~~ 386 (494)
++++ |..+++|-+.-+
T Consensus 565 ivTgSADKnVKiWGLdFG 582 (888)
T KOG0306|consen 565 IVTGSADKNVKIWGLDFG 582 (888)
T ss_pred EEeccCCCceEEeccccc
Confidence 9985 999999998764
|
|
| >PF08954 DUF1900: Domain of unknown function (DUF1900); InterPro: IPR015049 This domain is predominantly found in the structural protein coronin, and is duplicated in some sequences | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.9e-25 Score=175.33 Aligned_cols=134 Identities=58% Similarity=1.092 Sum_probs=91.3
Q ss_pred eeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccceeEEE
Q psy14130 302 LALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFF 381 (494)
Q Consensus 302 ~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~ 381 (494)
+....++...++..+.|++|.+.||++|.+|++|++|++..+++....+.++....+.++++|.|+..+.+..+|+.|++
T Consensus 2 l~~~~lD~s~g~L~P~yD~dt~llyl~gKGD~~ir~yEv~~~~p~l~~l~~~~s~~~~~G~~~lPK~~~dv~~~Ei~R~l 81 (136)
T PF08954_consen 2 LATQELDTSSGVLMPFYDEDTNLLYLAGKGDGNIRYYEVSDESPYLHYLSEYRSPEPQKGFAFLPKRACDVMKCEIARFL 81 (136)
T ss_dssp SEEEE----SS-EEEEE-TTT-EEEEEETT-S-EEEEEE-SSTTSEEEEEEE--SS--SEEEE--GGGS-GGGTEEEEEE
T ss_pred ceEEeccCCCceeEeeEcCCCCEEEEEeccCcEEEEEEEcCCCCceEEccccccCCCeEeeEecCcccCCchheeeeeee
Confidence 34566788899999999999999999999999999999999998899999999999999999999999999999999999
Q ss_pred EeeCCCCeEEEeEEEeeCC-CCCCCCCCCCCCCCCCcccCHhhhcCCCCCCCeEecc
Q psy14130 382 KLHTTRNMCEPISMIVPRK-SDQFQDDLYPDTAAPVPALSAADWYKGVNRPPVLMSM 437 (494)
Q Consensus 382 ~l~~~~~~~~~~~~~~pr~-~~~~~~~~~~~~~~~~~~~~~~~w~~g~~~~~~~~sl 437 (494)
+++. +.++|++|.|||| ++.||+|+||++.+.+|+++++||++|+|++|.++||
T Consensus 82 kl~~--~~iepisf~VPRk~~~~Fq~DlyP~t~~~~Pa~ta~eW~~G~~~~p~~vSL 136 (136)
T PF08954_consen 82 KLTN--DKIEPISFIVPRKQSEYFQDDLYPDTRGTEPAMTAEEWLSGKNAEPKLVSL 136 (136)
T ss_dssp EEET--TEEEEEEEE------SS--CCC---EE-SS-SB-HHHHHTT------EE-S
T ss_pred eecC--CcEEEEEEEeeccccccccccCCCCCCCCccccCHHHHHCCCCCCCeEecC
Confidence 9998 3599999999999 8999999999999999999999999999999999987
|
It has no known function []. ; PDB: 2B4E_A 2AQ5_A. |
| >KOG0973|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.5e-24 Score=210.36 Aligned_cols=214 Identities=14% Similarity=0.210 Sum_probs=170.1
Q ss_pred cceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEE
Q psy14130 167 EWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVL 246 (494)
Q Consensus 167 ~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iw 246 (494)
+....+.+|...|..++|+|++ .+||++|.|++|.+||..+.+.+.++.+|.+.|-.+.|+|-|++|+|-+.|++|++|
T Consensus 120 k~~~~l~~H~~DV~Dv~Wsp~~-~~lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvw 198 (942)
T KOG0973|consen 120 KVVSILRGHDSDVLDVNWSPDD-SLLVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVW 198 (942)
T ss_pred eEEEEEecCCCccceeccCCCc-cEEEEecccceEEEEccccceeeeeeecccccccceEECCccCeeeeecCCceEEEE
Confidence 4667899999999999999998 799999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCceEEEeeecCC-----CCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCC
Q psy14130 247 DPRTGLVISQGVCHPG-----TRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHD 321 (494)
Q Consensus 247 d~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 321 (494)
++.+..+.+.+..+.. ....++.|+|++.+|.+.---+..-..+.|.+-.+... ....++|..++.++.|+|.
T Consensus 199 rt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~--~~~LvGH~~p~evvrFnP~ 276 (942)
T KOG0973|consen 199 RTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKV--DKDLVGHSAPVEVVRFNPK 276 (942)
T ss_pred EcccceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeEEEecCCcee--eeeeecCCCceEEEEeChH
Confidence 9887776666654432 23678999999554444321112345678887654433 2334568889999999982
Q ss_pred --------C-------C-EEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCcee-ee-ccceeEEEEe
Q psy14130 322 --------T-------R-ILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCD-VT-QCEIFRFFKL 383 (494)
Q Consensus 322 --------~-------~-~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~-~~-~~~~~~~~~l 383 (494)
| . .++++|+.|++|.||.....+|+..... ....+|..++|+|||..+ ++ -|+.+.++.+
T Consensus 277 lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~--lf~~SI~DmsWspdG~~LfacS~DGtV~~i~F 354 (942)
T KOG0973|consen 277 LFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVIHN--LFNKSIVDMSWSPDGFSLFACSLDGTVALIHF 354 (942)
T ss_pred HhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCchhhhhh--hhcCceeeeeEcCCCCeEEEEecCCeEEEEEc
Confidence 1 1 1678999999999999988888644432 236789999999998744 33 4999999998
Q ss_pred eC
Q psy14130 384 HT 385 (494)
Q Consensus 384 ~~ 385 (494)
..
T Consensus 355 ee 356 (942)
T KOG0973|consen 355 EE 356 (942)
T ss_pred ch
Confidence 87
|
|
| >KOG0306|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-23 Score=200.69 Aligned_cols=198 Identities=18% Similarity=0.198 Sum_probs=162.4
Q ss_pred ecCCcEEEEEEcCcEEEEEcCCCCC----CCC-cc-cceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe
Q psy14130 137 VAGGGAFLVLPIHRVKLWYIPDGGL----SGN-LN-EWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE 210 (494)
Q Consensus 137 ~~~~g~~~~~~~~~v~iw~~~~~~~----~~~-~~-~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~ 210 (494)
..+.|.+.+..+.+|++||..--.. ... +. ....+++ -...|.|+++||++ .+||.+--|.+|++|-+.+-+
T Consensus 464 pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLe-l~ddvL~v~~Spdg-k~LaVsLLdnTVkVyflDtlK 541 (888)
T KOG0306|consen 464 PDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLE-LEDDVLCVSVSPDG-KLLAVSLLDNTVKVYFLDTLK 541 (888)
T ss_pred CCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEe-ccccEEEEEEcCCC-cEEEEEeccCeEEEEEeccee
Confidence 3445566666677899999642211 000 00 0112222 45679999999999 799999999999999999999
Q ss_pred EEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceE
Q psy14130 211 ALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQV 290 (494)
Q Consensus 211 ~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i 290 (494)
...++-||.=+|.|+..+||+++++|||.|++|++|-+.=|.|...+.+|... +.++.|.|....++++| .|+.|
T Consensus 542 FflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fAHdDS-vm~V~F~P~~~~FFt~g----KD~kv 616 (888)
T KOG0306|consen 542 FFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDDS-VMSVQFLPKTHLFFTCG----KDGKV 616 (888)
T ss_pred eeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhcccCc-eeEEEEcccceeEEEec----CcceE
Confidence 98999999999999999999999999999999999999999999999999998 99999999855555555 99999
Q ss_pred EEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCC
Q psy14130 291 GLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNER 344 (494)
Q Consensus 291 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~ 344 (494)
+-||-.++.....+. .|...|.+++.+|+|.++ ++++.|.+|++|+.....
T Consensus 617 KqWDg~kFe~iq~L~--~H~~ev~cLav~~~G~~v-vs~shD~sIRlwE~tde~ 667 (888)
T KOG0306|consen 617 KQWDGEKFEEIQKLD--GHHSEVWCLAVSPNGSFV-VSSSHDKSIRLWERTDEI 667 (888)
T ss_pred Eeechhhhhhheeec--cchheeeeeEEcCCCCeE-EeccCCceeEeeeccCcc
Confidence 999988776644443 477899999999999999 999999999999987644
|
|
| >KOG0289|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.5e-23 Score=185.54 Aligned_cols=218 Identities=20% Similarity=0.241 Sum_probs=171.6
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecC--CCCceEEEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDC--HPDVINCLSF 227 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~--h~~~v~~l~~ 227 (494)
.|+||..... ........|..+|+.+..+|+| .+|++++.|++..+.|++++..+..... ..-.+++.+|
T Consensus 284 ~i~vws~~~~-------s~~~~~~~h~~~V~~ls~h~tg-eYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~f 355 (506)
T KOG0289|consen 284 IIRVWSVPLS-------SEPTSSRPHEEPVTGLSLHPTG-EYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAF 355 (506)
T ss_pred eEEeeccccc-------cCccccccccccceeeeeccCC-cEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeE
Confidence 6999998877 3445667899999999999999 5999999999999999999998877653 2245899999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee
Q psy14130 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV 307 (494)
Q Consensus 228 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~ 307 (494)
+|||.+|.+|..|+.|+|||+.++..+..|.+|.+. +..+.|+.+ +++++++ .+|+.|++||+|.......+ .+
T Consensus 356 HpDgLifgtgt~d~~vkiwdlks~~~~a~Fpght~~-vk~i~FsEN-GY~Lat~---add~~V~lwDLRKl~n~kt~-~l 429 (506)
T KOG0289|consen 356 HPDGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGP-VKAISFSEN-GYWLATA---ADDGSVKLWDLRKLKNFKTI-QL 429 (506)
T ss_pred cCCceEEeccCCCceEEEEEcCCccccccCCCCCCc-eeEEEeccC-ceEEEEE---ecCCeEEEEEehhhccccee-ec
Confidence 999999999999999999999999999999999998 999999887 7777877 68999999999986643333 33
Q ss_pred cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEe
Q psy14130 308 DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKL 383 (494)
Q Consensus 308 ~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l 383 (494)
+...++.++.|++.|.+| +.++.|=.|++++-.+.+- ........+.+..+++.|...-.+++++ |.++|++.+
T Consensus 430 ~~~~~v~s~~fD~SGt~L-~~~g~~l~Vy~~~k~~k~W-~~~~~~~~~sg~st~v~Fg~~aq~l~s~smd~~l~~~a~ 505 (506)
T KOG0289|consen 430 DEKKEVNSLSFDQSGTYL-GIAGSDLQVYICKKKTKSW-TEIKELADHSGLSTGVRFGEHAQYLASTSMDAILRLYAL 505 (506)
T ss_pred cccccceeEEEcCCCCeE-EeecceeEEEEEecccccc-eeeehhhhcccccceeeecccceEEeeccchhheEEeec
Confidence 444579999999999999 6665665555554333221 2222233445678899998877777664 666666654
|
|
| >KOG0274|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.6e-23 Score=204.57 Aligned_cols=212 Identities=20% Similarity=0.358 Sum_probs=172.2
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEE
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSF 227 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~ 227 (494)
+.++++||+.++ ++...+.||...|.++...+ ..+++||.|.+|++|++.++..+..+.+|.++|+++..
T Consensus 270 D~t~rvWd~~sg-------~C~~~l~gh~stv~~~~~~~---~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~ 339 (537)
T KOG0274|consen 270 DKTERVWDCSTG-------ECTHSLQGHTSSVRCLTIDP---FLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQL 339 (537)
T ss_pred CCcEEeEecCCC-------cEEEEecCCCceEEEEEccC---ceEeeccCCceEEEEeccCcceEEEeccccccEEEEEe
Confidence 458999999999 88999999999999998775 47899999999999999999999999999999999999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCC-CCceeEee
Q psy14130 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDL-NTPLALET 306 (494)
Q Consensus 228 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~-~~~~~~~~ 306 (494)
+ +.++++|+.|++|++||+++++++..+.+|... +.++.+.+. ..+..| +.|++|++||+++. +....+
T Consensus 340 ~--~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~-V~sl~~~~~--~~~~Sg---s~D~~IkvWdl~~~~~c~~tl-- 409 (537)
T KOG0274|consen 340 D--EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGR-VYSLIVDSE--NRLLSG---SLDTTIKVWDLRTKRKCIHTL-- 409 (537)
T ss_pred c--CCEEEEEecCceEEEEEhhhceeeeeecCCcce-EEEEEecCc--ceEEee---eeccceEeecCCchhhhhhhh--
Confidence 7 889999999999999999999999999999998 888876553 455555 58999999999987 443332
Q ss_pred ecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceee-eccceeEEEEeeC
Q psy14130 307 VDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDV-TQCEIFRFFKLHT 385 (494)
Q Consensus 307 ~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~-~~~~~~~~~~l~~ 385 (494)
.++..+. ......++.| ++++.|++|++||..++++...+-.. +...|..+++. +..+++ +.++.+++|++..
T Consensus 410 -~~h~~~v-~~l~~~~~~L-vs~~aD~~Ik~WD~~~~~~~~~~~~~--~~~~v~~l~~~-~~~il~s~~~~~~~l~dl~~ 483 (537)
T KOG0274|consen 410 -QGHTSLV-SSLLLRDNFL-VSSSADGTIKLWDAEEGECLRTLEGR--HVGGVSALALG-KEEILCSSDDGSVKLWDLRS 483 (537)
T ss_pred -cCCcccc-ccccccccee-EeccccccEEEeecccCceeeeeccC--CcccEEEeecC-cceEEEEecCCeeEEEeccc
Confidence 2333333 2334467777 99999999999999999885544332 33567777777 333333 3599999999987
|
|
| >KOG4283|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.8e-23 Score=176.07 Aligned_cols=167 Identities=19% Similarity=0.282 Sum_probs=144.8
Q ss_pred cccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCC---CCEEEEEeCCCeEEEEeCCC
Q psy14130 174 GHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRD---GSRLVTTCKDKTVRVLDPRT 250 (494)
Q Consensus 174 ~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~---~~~l~s~~~d~~v~iwd~~~ 250 (494)
+|+-.|.++.|-|-..-++.++|.|.++++||..+.+....|+ .++.|++-+++|- .-++|+|..|-.|++.|+.+
T Consensus 99 ~Hky~iss~~WyP~DtGmFtssSFDhtlKVWDtnTlQ~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~S 177 (397)
T KOG4283|consen 99 GHKYAISSAIWYPIDTGMFTSSSFDHTLKVWDTNTLQEAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIAS 177 (397)
T ss_pred cceeeeeeeEEeeecCceeecccccceEEEeecccceeeEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEeccC
Confidence 5889999999999765699999999999999999999888887 7889999999993 44788899999999999999
Q ss_pred CceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCC------------CceeEe-eecCCCceEEeE
Q psy14130 251 GLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLN------------TPLALE-TVDSSSGVLFPY 317 (494)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~------------~~~~~~-~~~~~~~v~~~~ 317 (494)
|...+.+.+|.+. +..+.|+|....++++| +.||.|++||+|... .+...+ ...|.+.+..++
T Consensus 178 Gs~sH~LsGHr~~-vlaV~Wsp~~e~vLatg---saDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla 253 (397)
T KOG4283|consen 178 GSFSHTLSGHRDG-VLAVEWSPSSEWVLATG---SADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLA 253 (397)
T ss_pred CcceeeeccccCc-eEEEEeccCceeEEEec---CCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeee
Confidence 9999999999999 99999999999999999 999999999998531 111112 334567789999
Q ss_pred EeCCCCEEEEEEeCCCcEEEEEeeCCCce
Q psy14130 318 YDHDTRILFLAGKGDGNIRYYELTNERPY 346 (494)
Q Consensus 318 ~~~~~~~l~~~g~~dg~i~~wd~~~~~~~ 346 (494)
|+.++.++ ++.+.|..+++|+..+|+..
T Consensus 254 ~tSd~~~l-~~~gtd~r~r~wn~~~G~nt 281 (397)
T KOG4283|consen 254 WTSDARYL-ASCGTDDRIRVWNMESGRNT 281 (397)
T ss_pred ecccchhh-hhccCccceEEeecccCccc
Confidence 99999999 77779999999999988753
|
|
| >KOG1274|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=4e-23 Score=201.95 Aligned_cols=203 Identities=14% Similarity=0.157 Sum_probs=169.4
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
++|.+|.++++. .-..+...+-++++++|+.+| .++|.||.|-.|++-+..+......+.+|.++|.++.|+
T Consensus 76 ~tv~~y~fps~~-------~~~iL~Rftlp~r~~~v~g~g-~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~ 147 (933)
T KOG1274|consen 76 NTVLRYKFPSGE-------EDTILARFTLPIRDLAVSGSG-KMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYD 147 (933)
T ss_pred ceEEEeeCCCCC-------ccceeeeeeccceEEEEecCC-cEEEeecCceeEEEEeccccchheeecccCCceeeeeEc
Confidence 479999999883 333344456788999999998 799999999999999999999999999999999999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceEEEeeecC-------CCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCc
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHP-------GTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTP 301 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~ 301 (494)
|++.+||+.+-||.|++||+.++.+..++.+-. ...+..++|+|+++.+++.+ .|+.|++|+..+....
T Consensus 148 p~~~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~----~d~~Vkvy~r~~we~~ 223 (933)
T KOG1274|consen 148 PKGNFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPP----VDNTVKVYSRKGWELQ 223 (933)
T ss_pred CCCCEEEEEecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeec----cCCeEEEEccCCceeh
Confidence 999999999999999999999988666553221 23367889999999999988 8999999999887776
Q ss_pred eeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCcee
Q psy14130 302 LALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCD 371 (494)
Q Consensus 302 ~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~ 371 (494)
..+..-.++..+..+.|+|.|++| ++++.||.|.|||+++-. .+.....|.+++|.|+...+
T Consensus 224 f~Lr~~~~ss~~~~~~wsPnG~Yi-AAs~~~g~I~vWnv~t~~-------~~~~~~~Vc~~aw~p~~n~i 285 (933)
T KOG1274|consen 224 FKLRDKLSSSKFSDLQWSPNGKYI-AASTLDGQILVWNVDTHE-------RHEFKRAVCCEAWKPNANAI 285 (933)
T ss_pred eeecccccccceEEEEEcCCCcEE-eeeccCCcEEEEecccch-------hccccceeEEEecCCCCCee
Confidence 666555555668999999999999 999999999999999822 13335679999999986543
|
|
| >KOG0310|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.7e-23 Score=191.16 Aligned_cols=223 Identities=16% Similarity=0.185 Sum_probs=186.5
Q ss_pred EEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEE
Q psy14130 145 VLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINC 224 (494)
Q Consensus 145 ~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~ 224 (494)
++..-.+.||+..+. ....++.-....|.++.|-.+| .+||+|...|.|+++|..+...++.+.+|+.+|..
T Consensus 44 Vt~S~rvqly~~~~~-------~~~k~~srFk~~v~s~~fR~DG-~LlaaGD~sG~V~vfD~k~r~iLR~~~ah~apv~~ 115 (487)
T KOG0310|consen 44 VTSSVRVQLYSSVTR-------SVRKTFSRFKDVVYSVDFRSDG-RLLAAGDESGHVKVFDMKSRVILRQLYAHQAPVHV 115 (487)
T ss_pred EecccEEEEEecchh-------hhhhhHHhhccceeEEEeecCC-eEEEccCCcCcEEEeccccHHHHHHHhhccCceeE
Confidence 333346999998887 4445555577889999999999 69999999999999997776678889999999999
Q ss_pred EEEcCC-CCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCcee
Q psy14130 225 LSFNRD-GSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLA 303 (494)
Q Consensus 225 l~~~~~-~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~ 303 (494)
+.|+|+ +..+++|+.|+.+++||+.+......+.+|... +.+..|+|..+.++++| +.||.|++||++... ..
T Consensus 116 ~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDY-VR~g~~~~~~~hivvtG---sYDg~vrl~DtR~~~--~~ 189 (487)
T KOG0310|consen 116 TKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDY-VRCGDISPANDHIVVTG---SYDGKVRLWDTRSLT--SR 189 (487)
T ss_pred EEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcce-eEeeccccCCCeEEEec---CCCceEEEEEeccCC--ce
Confidence 999995 567888899999999999999876689999998 99999999989999999 899999999999754 23
Q ss_pred EeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEE
Q psy14130 304 LETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFF 381 (494)
Q Consensus 304 ~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~ 381 (494)
...++|..+|..+.+-|.|..+ +++ +...|++||+.+|..+..... .|...|+++++..++..++++ |+.+++|
T Consensus 190 v~elnhg~pVe~vl~lpsgs~i-asA-gGn~vkVWDl~~G~qll~~~~--~H~KtVTcL~l~s~~~rLlS~sLD~~VKVf 265 (487)
T KOG0310|consen 190 VVELNHGCPVESVLALPSGSLI-ASA-GGNSVKVWDLTTGGQLLTSMF--NHNKTVTCLRLASDSTRLLSGSLDRHVKVF 265 (487)
T ss_pred eEEecCCCceeeEEEcCCCCEE-EEc-CCCeEEEEEecCCceehhhhh--cccceEEEEEeecCCceEeecccccceEEE
Confidence 4567788999999999999988 665 356899999997764333222 256789999999998888886 9999999
Q ss_pred EeeC
Q psy14130 382 KLHT 385 (494)
Q Consensus 382 ~l~~ 385 (494)
+++.
T Consensus 266 d~t~ 269 (487)
T KOG0310|consen 266 DTTN 269 (487)
T ss_pred Eccc
Confidence 9665
|
|
| >KOG1446|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=4e-22 Score=173.17 Aligned_cols=225 Identities=16% Similarity=0.176 Sum_probs=178.8
Q ss_pred EcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeC--CCeEEEEECCCCeEEEEecCCCCceEE
Q psy14130 147 PIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGF--DYLIILWDVGKGEALTVIDCHPDVINC 224 (494)
Q Consensus 147 ~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~--d~~v~iwd~~~~~~~~~~~~h~~~v~~ 224 (494)
.++.++|||..++ ..+.++..++-.|..++|.... +.++.++. |.+||..++.+.+.++.+.||...|.+
T Consensus 34 ~dDsl~LYd~~~g-------~~~~ti~skkyG~~~~~Fth~~-~~~i~sStk~d~tIryLsl~dNkylRYF~GH~~~V~s 105 (311)
T KOG1446|consen 34 EDDSLRLYDSLSG-------KQVKTINSKKYGVDLACFTHHS-NTVIHSSTKEDDTIRYLSLHDNKYLRYFPGHKKRVNS 105 (311)
T ss_pred CCCeEEEEEcCCC-------ceeeEeecccccccEEEEecCC-ceEEEccCCCCCceEEEEeecCceEEEcCCCCceEEE
Confidence 3448999999999 6677777788889999996665 45555555 889999999999999999999999999
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCC-CCcee
Q psy14130 225 LSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDL-NTPLA 303 (494)
Q Consensus 225 l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~-~~~~~ 303 (494)
|+.+|-+..++|++.|++|++||+|..++...+.... ...++|.|. +.++|++ .....|++||+|.. +.|..
T Consensus 106 L~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~---~pi~AfDp~-GLifA~~---~~~~~IkLyD~Rs~dkgPF~ 178 (311)
T KOG1446|consen 106 LSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSG---RPIAAFDPE-GLIFALA---NGSELIKLYDLRSFDKGPFT 178 (311)
T ss_pred EEecCCCCeEEecccCCeEEeeEecCCCCceEEecCC---CcceeECCC-CcEEEEe---cCCCeEEEEEecccCCCCce
Confidence 9999999999999999999999999887665554332 245678777 8899998 55559999999986 44554
Q ss_pred Eeeec--CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeE
Q psy14130 304 LETVD--SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFR 379 (494)
Q Consensus 304 ~~~~~--~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~ 379 (494)
...+. .......+.|+|||+.| +.+...+.+++.|.-+|.....+........-.-+.+|+||+.+++++ |+.+.
T Consensus 179 tf~i~~~~~~ew~~l~FS~dGK~i-LlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs~dg~i~ 257 (311)
T KOG1446|consen 179 TFSITDNDEAEWTDLEFSPDGKSI-LLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSKFVLSGSDDGTIH 257 (311)
T ss_pred eEccCCCCccceeeeEEcCCCCEE-EEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCCcEEEEecCCCcEE
Confidence 44433 34678899999999999 555688999999999998655543333223334678899999999886 79999
Q ss_pred EEEeeCCC
Q psy14130 380 FFKLHTTR 387 (494)
Q Consensus 380 ~~~l~~~~ 387 (494)
+|++.+++
T Consensus 258 vw~~~tg~ 265 (311)
T KOG1446|consen 258 VWNLETGK 265 (311)
T ss_pred EEEcCCCc
Confidence 99998743
|
|
| >KOG0641|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.6e-22 Score=165.81 Aligned_cols=177 Identities=15% Similarity=0.195 Sum_probs=143.4
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecC--C-----CCce
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDC--H-----PDVI 222 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~--h-----~~~v 222 (494)
+|.+-|...+ +..+.+.||++-|.++- +-++ .++++|+.|.+|++||++-..++.++.. | ...|
T Consensus 164 ~iy~tdc~~g-------~~~~a~sghtghilaly-swn~-~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessav 234 (350)
T KOG0641|consen 164 KIYITDCGRG-------QGFHALSGHTGHILALY-SWNG-AMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAV 234 (350)
T ss_pred eEEEeecCCC-------CcceeecCCcccEEEEE-EecC-cEEEccCCCceEEEEeeeccceeeeccCcccCCCccccee
Confidence 4666677777 77889999999998874 2234 6999999999999999998888887752 2 2579
Q ss_pred EEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCC--CC
Q psy14130 223 NCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDL--NT 300 (494)
Q Consensus 223 ~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~--~~ 300 (494)
.+++..|.|++|++|-.|....+||++.++.++.+..|... +.++.|+|.- .++.++ +.|..|++-|+... .+
T Consensus 235 aav~vdpsgrll~sg~~dssc~lydirg~r~iq~f~phsad-ir~vrfsp~a-~yllt~---syd~~ikltdlqgdla~e 309 (350)
T KOG0641|consen 235 AAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRFHPHSAD-IRCVRFSPGA-HYLLTC---SYDMKIKLTDLQGDLAHE 309 (350)
T ss_pred EEEEECCCcceeeeccCCCceEEEEeeCCceeeeeCCCccc-eeEEEeCCCc-eEEEEe---cccceEEEeecccchhhc
Confidence 99999999999999999999999999999999999999987 8999999984 444455 57999999998742 11
Q ss_pred ceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEee
Q psy14130 301 PLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELT 341 (494)
Q Consensus 301 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~ 341 (494)
.......+|...+..+.|+|..-.+ ++.+.|.++.+|-+.
T Consensus 310 l~~~vv~ehkdk~i~~rwh~~d~sf-isssadkt~tlwa~~ 349 (350)
T KOG0641|consen 310 LPIMVVAEHKDKAIQCRWHPQDFSF-ISSSADKTATLWALN 349 (350)
T ss_pred CceEEEEeccCceEEEEecCcccee-eeccCcceEEEeccC
Confidence 2222334577788889999987666 888999999999764
|
|
| >KOG0294|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.5e-23 Score=177.94 Aligned_cols=215 Identities=16% Similarity=0.257 Sum_probs=172.5
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCC-CEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAE-NVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSF 227 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~-~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~ 227 (494)
.+|+|||++.. ..+..+..|.+.|+++.|.+... +.|++|+.||.|.+|+...-+++.++++|.+.|+.++.
T Consensus 63 etI~IYDm~k~-------~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~lsi 135 (362)
T KOG0294|consen 63 ETIHIYDMRKR-------KQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKSLKAHKGQVTDLSI 135 (362)
T ss_pred CcEEEEeccch-------hhhcceeccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEeeeecccccccceeEe
Confidence 47999999988 56667778999999999988741 38999999999999999999999999999999999999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee
Q psy14130 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV 307 (494)
Q Consensus 228 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~ 307 (494)
+|.|++-++.+.|+.+++||+-+|+.-..+..... ...+.|+|.+.+++..+ ...|-+|.+.+.... ..+
T Consensus 136 HPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~~~--at~v~w~~~Gd~F~v~~-----~~~i~i~q~d~A~v~---~~i 205 (362)
T KOG0294|consen 136 HPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLKNK--ATLVSWSPQGDHFVVSG-----RNKIDIYQLDNASVF---REI 205 (362)
T ss_pred cCCCceEEEEcCCceeeeehhhcCccceeeccCCc--ceeeEEcCCCCEEEEEe-----ccEEEEEecccHhHh---hhh
Confidence 99999999999999999999999986555544443 35689999977677666 667999998764332 222
Q ss_pred cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEE--ecCCceeee--ccceeEEEEe
Q psy14130 308 DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGF--MPKRGCDVT--QCEIFRFFKL 383 (494)
Q Consensus 308 ~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~--~p~~~~~~~--~~~~~~~~~l 383 (494)
.....+.++.|. ++..| ++|..|+.|.+||.....++..++. |...|.++.+ .|++.++++ +||.|++|++
T Consensus 206 ~~~~r~l~~~~l-~~~~L-~vG~d~~~i~~~D~ds~~~~~~~~A---H~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~ 280 (362)
T KOG0294|consen 206 ENPKRILCATFL-DGSEL-LVGGDNEWISLKDTDSDTPLTEFLA---HENRVKDIASYTNPEHEYLVTASSDGFIKVWDI 280 (362)
T ss_pred hccccceeeeec-CCceE-EEecCCceEEEeccCCCccceeeec---chhheeeeEEEecCCceEEEEeccCceEEEEEc
Confidence 233456666664 45666 7888999999999999887655543 3678999985 356777766 5999999999
Q ss_pred eC
Q psy14130 384 HT 385 (494)
Q Consensus 384 ~~ 385 (494)
..
T Consensus 281 ~~ 282 (362)
T KOG0294|consen 281 DM 282 (362)
T ss_pred cc
Confidence 87
|
|
| >KOG0289|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.3e-23 Score=184.58 Aligned_cols=219 Identities=18% Similarity=0.274 Sum_probs=190.1
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcC
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNR 229 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~ 229 (494)
.+.++|.+.+ +.+..++||...|+.+.|+|+. ..+++++.|..|++|.............|.++|+.+..+|
T Consensus 242 ~av~~d~~s~-------q~l~~~~Gh~kki~~v~~~~~~-~~v~~aSad~~i~vws~~~~s~~~~~~~h~~~V~~ls~h~ 313 (506)
T KOG0289|consen 242 TAVLFDKPSN-------QILATLKGHTKKITSVKFHKDL-DTVITASADEIIRVWSVPLSSEPTSSRPHEEPVTGLSLHP 313 (506)
T ss_pred ceEEEecchh-------hhhhhccCcceEEEEEEeccch-hheeecCCcceEEeeccccccCccccccccccceeeeecc
Confidence 6899999988 6778899999999999999997 6899999999999999988888888889999999999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceEEEeeec-CCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec
Q psy14130 230 DGSRLVTTCKDKTVRVLDPRTGLVISQGVCH-PGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD 308 (494)
Q Consensus 230 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~ 308 (494)
.|.+|++++.|++..+.|++++..+...... .+....+.+|+|| +.|+.+| ..|+.|+|||+.+......+. .
T Consensus 314 tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpD-gLifgtg---t~d~~vkiwdlks~~~~a~Fp--g 387 (506)
T KOG0289|consen 314 TGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPD-GLIFGTG---TPDGVVKIWDLKSQTNVAKFP--G 387 (506)
T ss_pred CCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCC-ceEEecc---CCCceEEEEEcCCccccccCC--C
Confidence 9999999999999999999999977766553 3334788999999 8999999 899999999998766433332 3
Q ss_pred CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccceeEEEEeeC
Q psy14130 309 SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 309 ~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~~ 385 (494)
|.+.|..+.|+.+|-+| ++++.|+.|++||++..+.+..+...- ..++.++.|.+.|.+++.+.+.+++|....
T Consensus 388 ht~~vk~i~FsENGY~L-at~add~~V~lwDLRKl~n~kt~~l~~--~~~v~s~~fD~SGt~L~~~g~~l~Vy~~~k 461 (506)
T KOG0289|consen 388 HTGPVKAISFSENGYWL-ATAADDGSVKLWDLRKLKNFKTIQLDE--KKEVNSLSFDQSGTYLGIAGSDLQVYICKK 461 (506)
T ss_pred CCCceeEEEeccCceEE-EEEecCCeEEEEEehhhcccceeeccc--cccceeEEEcCCCCeEEeecceeEEEEEec
Confidence 77899999999999888 999999999999999988765554332 346999999999999999999999998774
|
|
| >KOG2055|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.7e-23 Score=184.82 Aligned_cols=223 Identities=19% Similarity=0.265 Sum_probs=173.0
Q ss_pred EEEEEcCCCCCCCCcccceEeccccc-ccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcC
Q psy14130 151 VKLWYIPDGGLSGNLNEWIMDLHGHK-RRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNR 229 (494)
Q Consensus 151 v~iw~~~~~~~~~~~~~~~~~~~~h~-~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~ 229 (494)
...||+.+.+. ..+..+.|+. ..+.....+|++ ++|+..+..|.|.+.-..+++.+.+++ ..+.|..++|+.
T Consensus 282 ~ysyDle~ak~-----~k~~~~~g~e~~~~e~FeVShd~-~fia~~G~~G~I~lLhakT~eli~s~K-ieG~v~~~~fsS 354 (514)
T KOG2055|consen 282 LYSYDLETAKV-----TKLKPPYGVEEKSMERFEVSHDS-NFIAIAGNNGHIHLLHAKTKELITSFK-IEGVVSDFTFSS 354 (514)
T ss_pred EEEeecccccc-----ccccCCCCcccchhheeEecCCC-CeEEEcccCceEEeehhhhhhhhheee-eccEEeeEEEec
Confidence 78899988755 4445555554 456778889998 799999999999999999999999888 678999999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCC---CCceeEee
Q psy14130 230 DGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDL---NTPLALET 306 (494)
Q Consensus 230 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~---~~~~~~~~ 306 (494)
+++.|+.++.+|.|.+||+++..+++.+....+.....++.+.+ +.++++| +..|.|.|||..+. ..|..+..
T Consensus 355 dsk~l~~~~~~GeV~v~nl~~~~~~~rf~D~G~v~gts~~~S~n-g~ylA~G---S~~GiVNIYd~~s~~~s~~PkPik~ 430 (514)
T KOG2055|consen 355 DSKELLASGGTGEVYVWNLRQNSCLHRFVDDGSVHGTSLCISLN-GSYLATG---SDSGIVNIYDGNSCFASTNPKPIKT 430 (514)
T ss_pred CCcEEEEEcCCceEEEEecCCcceEEEEeecCccceeeeeecCC-CceEEec---cCcceEEEeccchhhccCCCCchhh
Confidence 99999999999999999999999999998766554566666666 6799999 89999999996531 22333333
Q ss_pred ec-CCCceEEeEEeCCCCEEEEEE-eCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEE
Q psy14130 307 VD-SSSGVLFPYYDHDTRILFLAG-KGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFK 382 (494)
Q Consensus 307 ~~-~~~~v~~~~~~~~~~~l~~~g-~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~ 382 (494)
++ -...|.++.|+||++.|.++. ..+..+++-.+.+...+..+-..-..-+.|++++|+|.+.+++.+ .+.+.+|+
T Consensus 431 ~dNLtt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~sG~lAvGNe~grv~l~k 510 (514)
T KOG2055|consen 431 VDNLTTAITSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPNSGYLAVGNEAGRVHLFK 510 (514)
T ss_pred hhhhheeeeeeeeCcchhhhhhhhhccccceEEEeccceeeeccCCCCCCcccceEEEEecCCCceEEeecCCCceeeEe
Confidence 32 236799999999999984433 246779999988765432222222223668999999999999887 67888898
Q ss_pred ee
Q psy14130 383 LH 384 (494)
Q Consensus 383 l~ 384 (494)
|+
T Consensus 511 L~ 512 (514)
T KOG2055|consen 511 LH 512 (514)
T ss_pred ec
Confidence 85
|
|
| >KOG0643|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.4e-22 Score=171.57 Aligned_cols=208 Identities=19% Similarity=0.265 Sum_probs=175.5
Q ss_pred ecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy14130 171 DLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRT 250 (494)
Q Consensus 171 ~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~ 250 (494)
.++||.++++.+.++.+| .+|+||+.|.+..+|-..+|+.+-++.+|.+.|+++..+.+.+.+++|+.|.++++||+.+
T Consensus 5 ~l~GHERplTqiKyN~eG-DLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~t 83 (327)
T KOG0643|consen 5 LLQGHERPLTQIKYNREG-DLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVET 83 (327)
T ss_pred ccccCccccceEEecCCC-cEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCC
Confidence 478999999999999999 6999999999999999989999999999999999999999999999999999999999999
Q ss_pred CceEEEeeecCCCCceEEEEECCCCeEEEEEe-cCCCCceEEEEeCCCCC------CceeEeeecCCCceEEeEEeCCCC
Q psy14130 251 GLVISQGVCHPGTRSSKAVFIGDTGRIVTTGF-SRHSDRQVGLWDENDLN------TPLALETVDSSSGVLFPYYDHDTR 323 (494)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~-~~~~d~~i~iwd~~~~~------~~~~~~~~~~~~~v~~~~~~~~~~ 323 (494)
|+++.+++.... +.++.|+..++.++++.- ..+..+.|.++|++... .|.. ....+...++.+.|+|-++
T Consensus 84 Gk~la~~k~~~~--Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~-kI~t~~skit~a~Wg~l~~ 160 (327)
T KOG0643|consen 84 GKQLATWKTNSP--VKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYL-KIPTPDSKITSALWGPLGE 160 (327)
T ss_pred CcEEEEeecCCe--eEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceE-EecCCccceeeeeecccCC
Confidence 999999876543 788999998776666540 01135689999998432 2222 2223447889999999999
Q ss_pred EEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 324 ILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 324 ~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
.| ++|..||.|..||+++++.+......+ ...|+.+.++|++.+++++ |.+.++|+..+
T Consensus 161 ~i-i~Ghe~G~is~~da~~g~~~v~s~~~h--~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~t 221 (327)
T KOG0643|consen 161 TI-IAGHEDGSISIYDARTGKELVDSDEEH--SSKINDLQFSRDRTYFITGSKDTTAKLVDVRT 221 (327)
T ss_pred EE-EEecCCCcEEEEEcccCceeeechhhh--ccccccccccCCcceEEecccCccceeeeccc
Confidence 99 999999999999999997665554443 5589999999999999986 89999999887
|
|
| >KOG0293|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-23 Score=187.40 Aligned_cols=247 Identities=19% Similarity=0.286 Sum_probs=188.9
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 82 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~ 82 (494)
-||..+|.-+.||| |.++|++|+.|..++ +|+..+....
T Consensus 266 vgh~~~V~yi~wSP-DdryLlaCg~~e~~~-lwDv~tgd~~--------------------------------------- 304 (519)
T KOG0293|consen 266 VGHSQPVSYIMWSP-DDRYLLACGFDEVLS-LWDVDTGDLR--------------------------------------- 304 (519)
T ss_pred ecccCceEEEEECC-CCCeEEecCchHhee-eccCCcchhh---------------------------------------
Confidence 38999999999999 888999999999998 7764332210
Q ss_pred eccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCC
Q psy14130 83 PIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLS 162 (494)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~ 162 (494)
+.+.. +.......|+|.|+...++..+.++ ++..||+.....
T Consensus 305 --------------~~y~~--------------~~~~S~~sc~W~pDg~~~V~Gs~dr---------~i~~wdlDgn~~- 346 (519)
T KOG0293|consen 305 --------------HLYPS--------------GLGFSVSSCAWCPDGFRFVTGSPDR---------TIIMWDLDGNIL- 346 (519)
T ss_pred --------------hhccc--------------CcCCCcceeEEccCCceeEecCCCC---------cEEEecCCcchh-
Confidence 00000 0013345577777776666655443 688999876521
Q ss_pred CCcccceEeccc-ccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCC
Q psy14130 163 GNLNEWIMDLHG-HKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDK 241 (494)
Q Consensus 163 ~~~~~~~~~~~~-h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~ 241 (494)
...++ ....|.+++..++| ..+++...|..|++++.++......+. -..+|++++.+.||+++++--.+.
T Consensus 347 -------~~W~gvr~~~v~dlait~Dg-k~vl~v~~d~~i~l~~~e~~~dr~lis-e~~~its~~iS~d~k~~LvnL~~q 417 (519)
T KOG0293|consen 347 -------GNWEGVRDPKVHDLAITYDG-KYVLLVTVDKKIRLYNREARVDRGLIS-EEQPITSFSISKDGKLALVNLQDQ 417 (519)
T ss_pred -------hcccccccceeEEEEEcCCC-cEEEEEecccceeeechhhhhhhcccc-ccCceeEEEEcCCCcEEEEEcccC
Confidence 12222 22569999999999 577777789999999998776655454 457899999999999999999999
Q ss_pred eEEEEeCCCCceEEEeeecCCCC-ceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeC
Q psy14130 242 TVRVLDPRTGLVISQGVCHPGTR-SSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDH 320 (494)
Q Consensus 242 ~v~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~ 320 (494)
.+++||++..+.++++.+|.... +.+.+|-..+..++++| ++|+.|+||+.+++.....+ .+|...|.+++|+|
T Consensus 418 ei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSG---SED~kvyIWhr~sgkll~~L--sGHs~~vNcVswNP 492 (519)
T KOG0293|consen 418 EIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASG---SEDSKVYIWHRISGKLLAVL--SGHSKTVNCVSWNP 492 (519)
T ss_pred eeEEeecchhhHHHHhhcccccceEEEeccCCCCcceEEec---CCCceEEEEEccCCceeEee--cCCcceeeEEecCC
Confidence 99999999989999999997652 44556666666899999 99999999999876543332 35778999999999
Q ss_pred CCCEEEEEEeCCCcEEEEEeeC
Q psy14130 321 DTRILFLAGKGDGNIRYYELTN 342 (494)
Q Consensus 321 ~~~~l~~~g~~dg~i~~wd~~~ 342 (494)
....++|+++.||+|+||-...
T Consensus 493 ~~p~m~ASasDDgtIRIWg~~~ 514 (519)
T KOG0293|consen 493 ADPEMFASASDDGTIRIWGPSD 514 (519)
T ss_pred CCHHHhhccCCCCeEEEecCCc
Confidence 9999989999999999998654
|
|
| >KOG0283|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.5e-23 Score=203.78 Aligned_cols=205 Identities=22% Similarity=0.297 Sum_probs=166.7
Q ss_pred Eecc-cccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCC----------------------------------------
Q psy14130 170 MDLH-GHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGK---------------------------------------- 208 (494)
Q Consensus 170 ~~~~-~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~---------------------------------------- 208 (494)
+.+. +|.+.|.++.|+++| ++||+|+.|+.|+||.+..
T Consensus 260 Qe~~~ah~gaIw~mKFS~DG-KyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~ 338 (712)
T KOG0283|consen 260 QEISNAHKGAIWAMKFSHDG-KYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSS 338 (712)
T ss_pred eccccccCCcEEEEEeCCCC-ceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccc
Confidence 4555 899999999999999 7999999999999998744
Q ss_pred --------------------CeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEE
Q psy14130 209 --------------------GEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKA 268 (494)
Q Consensus 209 --------------------~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~ 268 (494)
.+++..+.||.+.|..|.|+.+ .+|++++.|++||+|++...+++..|. |... |+++
T Consensus 339 ~~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn-~fLLSSSMDKTVRLWh~~~~~CL~~F~-Hndf-VTcV 415 (712)
T KOG0283|consen 339 SRKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKN-NFLLSSSMDKTVRLWHPGRKECLKVFS-HNDF-VTCV 415 (712)
T ss_pred cccccCCccccCCCccccccccchhhhhccchhheecccccC-CeeEeccccccEEeecCCCcceeeEEe-cCCe-eEEE
Confidence 0123455689999999999965 589999999999999999999998885 7777 9999
Q ss_pred EEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEE
Q psy14130 269 VFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIH 348 (494)
Q Consensus 269 ~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~ 348 (494)
+|+|-+.+++.+| +-|+.||||++...+. ....+...-|++++|.|||+.. +.|+.+|.+++|+....+....
T Consensus 416 aFnPvDDryFiSG---SLD~KvRiWsI~d~~V---v~W~Dl~~lITAvcy~PdGk~a-vIGt~~G~C~fY~t~~lk~~~~ 488 (712)
T KOG0283|consen 416 AFNPVDDRYFISG---SLDGKVRLWSISDKKV---VDWNDLRDLITAVCYSPDGKGA-VIGTFNGYCRFYDTEGLKLVSD 488 (712)
T ss_pred EecccCCCcEeec---ccccceEEeecCcCee---EeehhhhhhheeEEeccCCceE-EEEEeccEEEEEEccCCeEEEe
Confidence 9999999999999 9999999999976332 2333455779999999999998 8999999999999988765433
Q ss_pred eccccc-----CCCCeeEEEEecCCc--eeee-ccceeEEEEeeC
Q psy14130 349 FLNQSL-----SGAPQRGLGFMPKRG--CDVT-QCEIFRFFKLHT 385 (494)
Q Consensus 349 ~~~~~~-----~~~~v~~~~~~p~~~--~~~~-~~~~~~~~~l~~ 385 (494)
..-... ....|+++.|.|... ++|+ +|..|||+++..
T Consensus 489 ~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~ 533 (712)
T KOG0283|consen 489 FHIRLHNKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRD 533 (712)
T ss_pred eeEeeccCccccCceeeeeEecCCCCCeEEEecCCCceEEEeccc
Confidence 321111 123799999997443 5655 599999999944
|
|
| >KOG0300|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.3e-23 Score=180.18 Aligned_cols=219 Identities=20% Similarity=0.329 Sum_probs=184.0
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEEC------C---------------
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDV------G--------------- 207 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~------~--------------- 207 (494)
.+.+||.++++ .++..+.||.+.|+++.|++.+ .+++++|.|++..||.. .
T Consensus 170 hTA~iWs~Esg-------~CL~~Y~GH~GSVNsikfh~s~-~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e 241 (481)
T KOG0300|consen 170 HTARIWSLESG-------ACLATYTGHTGSVNSIKFHNSG-LLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEE 241 (481)
T ss_pred cceeEEeeccc-------cceeeecccccceeeEEecccc-ceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhh
Confidence 46899999999 8889999999999999999998 79999999999999973 0
Q ss_pred ---------------C----CeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEE
Q psy14130 208 ---------------K----GEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKA 268 (494)
Q Consensus 208 ---------------~----~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~ 268 (494)
. ..++..+.+|.+.|.+..|...|+.+++++.|++..+||+++|+++..+.+|... ...+
T Consensus 242 ~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~E-LtHc 320 (481)
T KOG0300|consen 242 HSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTGHDSE-LTHC 320 (481)
T ss_pred cccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccceeeeeccCceeccccCcchh-cccc
Confidence 0 0145678899999999999999999999999999999999999999999999988 7888
Q ss_pred EEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEE
Q psy14130 269 VFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIH 348 (494)
Q Consensus 269 ~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~ 348 (494)
.-+|. .+|+.++ +.|.+.++||.+.. .+......+|...|++..|..+.+. ++|+.|.+|++||+++-+.
T Consensus 321 stHpt-QrLVvTs---SrDtTFRLWDFRea-I~sV~VFQGHtdtVTS~vF~~dd~v--VSgSDDrTvKvWdLrNMRs--- 390 (481)
T KOG0300|consen 321 STHPT-QRLVVTS---SRDTTFRLWDFREA-IQSVAVFQGHTDTVTSVVFNTDDRV--VSGSDDRTVKVWDLRNMRS--- 390 (481)
T ss_pred ccCCc-ceEEEEe---ccCceeEeccchhh-cceeeeecccccceeEEEEecCCce--eecCCCceEEEeeeccccC---
Confidence 88887 7888888 89999999999842 2222233457788999999887764 6999999999999998653
Q ss_pred ecccccCCCCeeEEEEecCCceeee--ccceeEEEEeeCC
Q psy14130 349 FLNQSLSGAPQRGLGFMPKRGCDVT--QCEIFRFFKLHTT 386 (494)
Q Consensus 349 ~~~~~~~~~~v~~~~~~p~~~~~~~--~~~~~~~~~l~~~ 386 (494)
.+..+....++..++.+..+..++. .+..+|+|+++..
T Consensus 391 plATIRtdS~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~ 430 (481)
T KOG0300|consen 391 PLATIRTDSPANRVAVSKGHPIIAIPHDNRQVRLFDLNGN 430 (481)
T ss_pred cceeeecCCccceeEeecCCceEEeccCCceEEEEecCCC
Confidence 2444555788999999988777766 4789999999873
|
|
| >KOG0275|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.8e-24 Score=182.99 Aligned_cols=229 Identities=19% Similarity=0.287 Sum_probs=189.9
Q ss_pred cEEEEEcCCCCCCCCcc-cceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEec-CCCCceEEEEE
Q psy14130 150 RVKLWYIPDGGLSGNLN-EWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVID-CHPDVINCLSF 227 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~-~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~h~~~v~~l~~ 227 (494)
-|.+|+..++++.+.+. +....+--+..+|.|+.|+.+. .+||+|+.||.|++|.+++|.+++.|. .|...|+++.|
T Consensus 236 FiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDs-EMlAsGsqDGkIKvWri~tG~ClRrFdrAHtkGvt~l~F 314 (508)
T KOG0275|consen 236 FIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDS-EMLASGSQDGKIKVWRIETGQCLRRFDRAHTKGVTCLSF 314 (508)
T ss_pred eeeeehhccchhhhhhhhhhhcceeecccceEEEeecccH-HHhhccCcCCcEEEEEEecchHHHHhhhhhccCeeEEEE
Confidence 59999999997765542 2223455588999999999998 599999999999999999999999997 89999999999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee
Q psy14130 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV 307 (494)
Q Consensus 228 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~ 307 (494)
+.|++.+++++.|.++|+.-+.+|+++.++.+|.+. ++...|.+++.++++++ +||+|++|+..+.+....+...
T Consensus 315 SrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSy-vn~a~ft~dG~~iisaS----sDgtvkvW~~KtteC~~Tfk~~ 389 (508)
T KOG0275|consen 315 SRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSY-VNEATFTDDGHHIISAS----SDGTVKVWHGKTTECLSTFKPL 389 (508)
T ss_pred ccCcchhhcccccceEEEeccccchhHHHhcCcccc-ccceEEcCCCCeEEEec----CCccEEEecCcchhhhhhccCC
Confidence 999999999999999999999999999999999998 99999999987777776 8999999999987776666666
Q ss_pred cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeee--ccceeEEEEeeC
Q psy14130 308 DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVT--QCEIFRFFKLHT 385 (494)
Q Consensus 308 ~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~--~~~~~~~~~l~~ 385 (494)
+....|.++..-|....-++.+...++|++-++.. +.+..+......++...+.+.+|+|..+-+ .|+.+..|.+..
T Consensus 390 ~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~qG-QvVrsfsSGkREgGdFi~~~lSpkGewiYcigED~vlYCF~~~s 468 (508)
T KOG0275|consen 390 GTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQG-QVVRSFSSGKREGGDFINAILSPKGEWIYCIGEDGVLYCFSVLS 468 (508)
T ss_pred CCcccceeEEEcCCCCceEEEEcCCCeEEEEeccc-eEEeeeccCCccCCceEEEEecCCCcEEEEEccCcEEEEEEeec
Confidence 66678888887786654447777888999988764 444556555555677888899999987665 466666666555
|
|
| >KOG0299|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-22 Score=183.84 Aligned_cols=233 Identities=18% Similarity=0.252 Sum_probs=187.9
Q ss_pred EEEEEcCcEEEEEcCCCCCCCCc----------ccceEec-ccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeE
Q psy14130 143 FLVLPIHRVKLWYIPDGGLSGNL----------NEWIMDL-HGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEA 211 (494)
Q Consensus 143 ~~~~~~~~v~iw~~~~~~~~~~~----------~~~~~~~-~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~ 211 (494)
+.+.+.++|.-|++.++....-+ ..+...- ++|...+.+++.++++ .+||+|+.|..|.|||.++.+.
T Consensus 158 fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dg-kylatgg~d~~v~Iw~~~t~eh 236 (479)
T KOG0299|consen 158 FSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDG-KYLATGGRDRHVQIWDCDTLEH 236 (479)
T ss_pred eecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCC-cEEEecCCCceEEEecCcccch
Confidence 33344457888888777532111 0111222 4899999999999999 7999999999999999999999
Q ss_pred EEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEE
Q psy14130 212 LTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVG 291 (494)
Q Consensus 212 ~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~ 291 (494)
++.+.+|.+.|.+++|-..-..|++++.|+.|++|++.....+.++.+|+.. +..+..... ++.+++| ..|++++
T Consensus 237 v~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~-v~~IdaL~r-eR~vtVG---grDrT~r 311 (479)
T KOG0299|consen 237 VKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQDG-VLGIDALSR-ERCVTVG---GRDRTVR 311 (479)
T ss_pred hhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCccc-eeeechhcc-cceEEec---cccceeE
Confidence 9999999999999999998889999999999999999999999999999998 888887776 7899999 8999999
Q ss_pred EEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEeccccc-CCC--------CeeEE
Q psy14130 292 LWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSL-SGA--------PQRGL 362 (494)
Q Consensus 292 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~-~~~--------~v~~~ 362 (494)
+|++....+ + ....+...+-|++|-.+. .+ ++|+.+|.|.+|++...+|+......|. .+. -|+++
T Consensus 312 lwKi~eesq-l--ifrg~~~sidcv~~In~~-Hf-vsGSdnG~IaLWs~~KKkplf~~~~AHgv~~~~~~~~~~~Witsl 386 (479)
T KOG0299|consen 312 LWKIPEESQ-L--IFRGGEGSIDCVAFINDE-HF-VSGSDNGSIALWSLLKKKPLFTSRLAHGVIPELDPVNGNFWITSL 386 (479)
T ss_pred EEeccccce-e--eeeCCCCCeeeEEEeccc-ce-eeccCCceEEEeeecccCceeEeeccccccCCccccccccceeee
Confidence 999954322 2 223455678888886554 44 7999999999999999998766543332 122 58899
Q ss_pred EEecCCceeeec--cceeEEEEeeCC
Q psy14130 363 GFMPKRGCDVTQ--CEIFRFFKLHTT 386 (494)
Q Consensus 363 ~~~p~~~~~~~~--~~~~~~~~l~~~ 386 (494)
+..|...+++++ ++.+|+|.+..+
T Consensus 387 a~i~~sdL~asGS~~G~vrLW~i~~g 412 (479)
T KOG0299|consen 387 AVIPGSDLLASGSWSGCVRLWKIEDG 412 (479)
T ss_pred EecccCceEEecCCCCceEEEEecCC
Confidence 999999999886 899999999984
|
|
| >KOG1407|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=2e-22 Score=170.04 Aligned_cols=238 Identities=18% Similarity=0.241 Sum_probs=166.8
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccc-----cccccCcccccccccceeecCCceEEEEEEEecCc
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRD-----GCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGG 77 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 77 (494)
+||.+.|-.++|+|.++.+|+|++.|.+|| +|+.+..+. ...+++.+...+.+..+++.+.+..+.+.+.
T Consensus 61 ~gh~~svdql~w~~~~~d~~atas~dk~ir-~wd~r~~k~~~~i~~~~eni~i~wsp~g~~~~~~~kdD~it~id~---- 135 (313)
T KOG1407|consen 61 RGHTDSVDQLCWDPKHPDLFATASGDKTIR-IWDIRSGKCTARIETKGENINITWSPDGEYIAVGNKDDRITFIDA---- 135 (313)
T ss_pred cCCCcchhhheeCCCCCcceEEecCCceEE-EEEeccCcEEEEeeccCcceEEEEcCCCCEEEEecCcccEEEEEe----
Confidence 899999999999999999999999999999 665543331 1123333334444444444433333333222
Q ss_pred eEEEEeccccccccCCCCceeecccCCccceeeceeccCCccCCCeeee-CCceEEEEEeecCCcEEEEEEcCcEEEEEc
Q psy14130 78 AFLVLPIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAA-NPKFVAVVTEVAGGGAFLVLPIHRVKLWYI 156 (494)
Q Consensus 78 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~ 156 (494)
-+++.+..... ....+-+.| +++.+ .++..+.+.|.|...
T Consensus 136 ---------------r~~~~~~~~~~--------------~~e~ne~~w~~~nd~----------Fflt~GlG~v~ILsy 176 (313)
T KOG1407|consen 136 ---------------RTYKIVNEEQF--------------KFEVNEISWNNSNDL----------FFLTNGLGCVEILSY 176 (313)
T ss_pred ---------------cccceeehhcc--------------cceeeeeeecCCCCE----------EEEecCCceEEEEec
Confidence 11111111100 011111222 22222 222333357999988
Q ss_pred CCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEE
Q psy14130 157 PDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVT 236 (494)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s 236 (494)
+.- +++..+++|.....|+.|+|+| ++||+|+.|..+.+||++.--+++.+..+.-+|..+.|+.||++||+
T Consensus 177 psL-------kpv~si~AH~snCicI~f~p~G-ryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lAS 248 (313)
T KOG1407|consen 177 PSL-------KPVQSIKAHPSNCICIEFDPDG-RYFATGSADALVSLWDVDELICERCISRLDWPVRTLSFSHDGRMLAS 248 (313)
T ss_pred ccc-------ccccccccCCcceEEEEECCCC-ceEeeccccceeeccChhHhhhheeeccccCceEEEEeccCcceeec
Confidence 865 8889999999999999999999 79999999999999999998899999999999999999999999999
Q ss_pred EeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCC------ceEEEEeC
Q psy14130 237 TCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSD------RQVGLWDE 295 (494)
Q Consensus 237 ~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d------~~i~iwd~ 295 (494)
+|.|..|-|=++.+|..+.+++.... ...++|+|. ..||+-+.+...+ |.+++|-+
T Consensus 249 aSEDh~IDIA~vetGd~~~eI~~~~~--t~tVAWHPk-~~LLAyA~ddk~~d~~reag~vKiFG~ 310 (313)
T KOG1407|consen 249 ASEDHFIDIAEVETGDRVWEIPCEGP--TFTVAWHPK-RPLLAYACDDKDGDSNREAGTVKIFGL 310 (313)
T ss_pred cCccceEEeEecccCCeEEEeeccCC--ceeEEecCC-CceeeEEecCCCCccccccceeEEecC
Confidence 99999999999999999988875443 689999999 4555544222222 55666543
|
|
| >KOG0647|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.8e-22 Score=169.28 Aligned_cols=209 Identities=12% Similarity=0.174 Sum_probs=154.8
Q ss_pred EcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCC-CEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEE
Q psy14130 147 PIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAE-NVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCL 225 (494)
Q Consensus 147 ~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~-~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l 225 (494)
.++++++||+.+++. ..+..|.++|.++.|-+... ..|+|||.|.+|+.||.+...++.+++ -.+.++++
T Consensus 92 ~Dk~~k~wDL~S~Q~--------~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~-LPeRvYa~ 162 (347)
T KOG0647|consen 92 CDKQAKLWDLASGQV--------SQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQ-LPERVYAA 162 (347)
T ss_pred cCCceEEEEccCCCe--------eeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeee-ccceeeeh
Confidence 345799999999832 35567999999999976541 389999999999999999999998887 56788887
Q ss_pred EEcCCCCEEEEEeCCCeEEEEeCCCCceE-EEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCC--CCce
Q psy14130 226 SFNRDGSRLVTTCKDKTVRVLDPRTGLVI-SQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDL--NTPL 302 (494)
Q Consensus 226 ~~~~~~~~l~s~~~d~~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~--~~~~ 302 (494)
..- ..+++.+..++.|.+|+++++... ......-..++.+++...+ +...+.| +-+|.+.|..+... ....
T Consensus 163 Dv~--~pm~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d-~~~~alG---siEGrv~iq~id~~~~~~nF 236 (347)
T KOG0647|consen 163 DVL--YPMAVVATAERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQD-KDGFALG---SIEGRVAIQYIDDPNPKDNF 236 (347)
T ss_pred hcc--CceeEEEecCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEec-CCceEee---eecceEEEEecCCCCccCce
Confidence 664 458889999999999999877532 2222222334667777666 4444667 68999999988764 2223
Q ss_pred eEeeecC-------CCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec
Q psy14130 303 ALETVDS-------SSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ 374 (494)
Q Consensus 303 ~~~~~~~-------~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~ 374 (494)
.+..+.. ...|.+++|+|.-..| +|.+.||++.+||-.....+. ....+..+|++.+|+.+|.+++-+
T Consensus 237 tFkCHR~~~~~~~~VYaVNsi~FhP~hgtl-vTaGsDGtf~FWDkdar~kLk---~s~~~~qpItcc~fn~~G~ifaYA 311 (347)
T KOG0647|consen 237 TFKCHRSTNSVNDDVYAVNSIAFHPVHGTL-VTAGSDGTFSFWDKDARTKLK---TSETHPQPITCCSFNRNGSIFAYA 311 (347)
T ss_pred eEEEeccCCCCCCceEEecceEeecccceE-EEecCCceEEEecchhhhhhh---ccCcCCCccceeEecCCCCEEEEE
Confidence 3322211 2357889999998888 899999999999987765432 223457899999999999877654
|
|
| >KOG0269|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.9e-23 Score=197.16 Aligned_cols=205 Identities=14% Similarity=0.222 Sum_probs=170.0
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcC
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNR 229 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~ 229 (494)
.|.+||+...... ..+..+..|++.|+++.||+...++|+|||.||+|++||++..+...++.+..+.|..|+|+|
T Consensus 111 ~i~vWdlnk~~rn----k~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp 186 (839)
T KOG0269|consen 111 VISVWDLNKSIRN----KLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSP 186 (839)
T ss_pred cEEEEecCccccc----hhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccchhhhceeecc
Confidence 5999999873211 445578889999999999999999999999999999999999998889988999999999999
Q ss_pred -CCCEEEEEeCCCeEEEEeCCCCc-eEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee
Q psy14130 230 -DGSRLVTTCKDKTVRVLDPRTGL-VISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV 307 (494)
Q Consensus 230 -~~~~l~s~~~d~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~ 307 (494)
.+..++++...|.+++||+|... +..++.+|.+. +.++-|+|+ +.++++| +.|+.|+|||+.+... .....+
T Consensus 187 ~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~Gp-V~c~nwhPn-r~~lATG---GRDK~vkiWd~t~~~~-~~~~tI 260 (839)
T KOG0269|consen 187 GYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGP-VLCLNWHPN-REWLATG---GRDKMVKIWDMTDSRA-KPKHTI 260 (839)
T ss_pred CCCceEEEecCCceEEEeeccCchhHHHHhhcccCc-eEEEeecCC-Cceeeec---CCCccEEEEeccCCCc-cceeEE
Confidence 67899999999999999999876 77888999999 999999996 7788888 7999999999986432 333445
Q ss_pred cCCCceEEeEEeCCCCEEEEEEe--CCCcEEEEEeeCCCceEEecccccCCCCeeEEEEec
Q psy14130 308 DSSSGVLFPYYDHDTRILFLAGK--GDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMP 366 (494)
Q Consensus 308 ~~~~~v~~~~~~~~~~~l~~~g~--~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p 366 (494)
....++.++.|-|..++.+++++ .|-.|+|||++..-.....+ ..+...+++++|-.
T Consensus 261 nTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP~~t~--~eH~~~vt~i~W~~ 319 (839)
T KOG0269|consen 261 NTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYIPYATF--LEHTDSVTGIAWDS 319 (839)
T ss_pred eecceeeeeeeccCccchhhhhhccccceEEEEeeccccccceee--eccCccccceeccC
Confidence 56678999999999988877765 57889999998754322222 33467789999965
|
|
| >KOG1539|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-21 Score=189.85 Aligned_cols=218 Identities=12% Similarity=0.071 Sum_probs=173.2
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEe---cCCCCceEEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVI---DCHPDVINCLS 226 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~---~~h~~~v~~l~ 226 (494)
.++.|+......-+ ..-....++.....+++++.++.| ++.+.|+..|+|-++++++|-...++ ..|.++|++++
T Consensus 423 ~~~tW~~~n~~~G~-~~L~~~~~~~~~~~~~av~vs~CG-NF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla 500 (910)
T KOG1539|consen 423 SAYTWNFRNKTSGR-HVLDPKRFKKDDINATAVCVSFCG-NFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLA 500 (910)
T ss_pred eEEEEeccCccccc-EEecCccccccCcceEEEEEeccC-ceEEEeccCCeEEEEEcccCeeecccccCccccCceeEEE
Confidence 48889988763311 000111222244778999999999 89999999999999999999888888 47999999999
Q ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEee
Q psy14130 227 FNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALET 306 (494)
Q Consensus 227 ~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~ 306 (494)
.+.-++.+++++.+|-+++||.....++..+..... +..+.++.. ..+++.+ ..|-.|+++|..+.+.... .
T Consensus 501 ~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~--~~~iv~hr~-s~l~a~~---~ddf~I~vvD~~t~kvvR~--f 572 (910)
T KOG1539|consen 501 VDGTNRLLVSAGADGILKFWDFKKKVLKKSLRLGSS--ITGIVYHRV-SDLLAIA---LDDFSIRVVDVVTRKVVRE--F 572 (910)
T ss_pred ecCCCceEEEccCcceEEEEecCCcceeeeeccCCC--cceeeeeeh-hhhhhhh---cCceeEEEEEchhhhhhHH--h
Confidence 999999999999999999999998887777765443 577777777 5566666 5899999999887443322 2
Q ss_pred ecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--c-ceeEEEE
Q psy14130 307 VDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--C-EIFRFFK 382 (494)
Q Consensus 307 ~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~-~~~~~~~ 382 (494)
.+|.+.++.+.|||||++| ++++.|++|++||+.++..+ ..+....+..++.|+|+|.++++. | .-+.+|-
T Consensus 573 ~gh~nritd~~FS~DgrWl-isasmD~tIr~wDlpt~~lI----D~~~vd~~~~sls~SPngD~LAT~Hvd~~gIylWs 646 (910)
T KOG1539|consen 573 WGHGNRITDMTFSPDGRWL-ISASMDSTIRTWDLPTGTLI----DGLLVDSPCTSLSFSPNGDFLATVHVDQNGIYLWS 646 (910)
T ss_pred hccccceeeeEeCCCCcEE-EEeecCCcEEEEeccCccee----eeEecCCcceeeEECCCCCEEEEEEecCceEEEEE
Confidence 3578999999999999999 89999999999999998764 334446889999999999999986 3 4567774
|
|
| >KOG0641|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.8e-21 Score=157.87 Aligned_cols=210 Identities=17% Similarity=0.245 Sum_probs=161.8
Q ss_pred cceEecccccccEEEEEEcCC---CCCEEEEEeC-CCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCe
Q psy14130 167 EWIMDLHGHKRRVGYIEWHPT---AENVVASAGF-DYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKT 242 (494)
Q Consensus 167 ~~~~~~~~h~~~V~~~~~~p~---~~~~l~s~s~-d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~ 242 (494)
....++.-|.+.|..++|-.+ +..+|++++. |..|++-|..+|+..+.+.+|.+-|.++ ++.+|-++++|+.|++
T Consensus 127 g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~a~sghtghilal-yswn~~m~~sgsqdkt 205 (350)
T KOG0641|consen 127 GHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFHALSGHTGHILAL-YSWNGAMFASGSQDKT 205 (350)
T ss_pred CcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcceeecCCcccEEEE-EEecCcEEEccCCCce
Confidence 334567779999999999533 3367888764 6788888999999999999999999886 5557889999999999
Q ss_pred EEEEeCCCCceEEEee--ecC----CCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEe
Q psy14130 243 VRVLDPRTGLVISQGV--CHP----GTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFP 316 (494)
Q Consensus 243 v~iwd~~~~~~~~~~~--~~~----~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~ 316 (494)
||+||++-..++.++. .|. ...+..++..|. ++++++| ..|....+||++.++.... ...|...|.++
T Consensus 206 irfwdlrv~~~v~~l~~~~~~~glessavaav~vdps-grll~sg---~~dssc~lydirg~r~iq~--f~phsadir~v 279 (350)
T KOG0641|consen 206 IRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPS-GRLLASG---HADSSCMLYDIRGGRMIQR--FHPHSADIRCV 279 (350)
T ss_pred EEEEeeeccceeeeccCcccCCCcccceeEEEEECCC-cceeeec---cCCCceEEEEeeCCceeee--eCCCccceeEE
Confidence 9999999988887763 222 233666666666 8999999 7999999999997654333 34678899999
Q ss_pred EEeCCCCEEEEEEeCCCcEEEEEeeCCCce-EEecccccCCCCeeEEEEecCCceeee--ccceeEEEEee
Q psy14130 317 YYDHDTRILFLAGKGDGNIRYYELTNERPY-IHFLNQSLSGAPQRGLGFMPKRGCDVT--QCEIFRFFKLH 384 (494)
Q Consensus 317 ~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~-~~~~~~~~~~~~v~~~~~~p~~~~~~~--~~~~~~~~~l~ 384 (494)
.|+|...++ ++++.|..|++-|++..-.. ...+..-.+...+..+.|+|..--+++ .|.+..+|.++
T Consensus 280 rfsp~a~yl-lt~syd~~ikltdlqgdla~el~~~vv~ehkdk~i~~rwh~~d~sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 280 RFSPGAHYL-LTCSYDMKIKLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQDFSFISSSADKTATLWALN 349 (350)
T ss_pred EeCCCceEE-EEecccceEEEeecccchhhcCceEEEEeccCceEEEEecCccceeeeccCcceEEEeccC
Confidence 999999888 99999999999999864210 111112234567888899997665555 49999999764
|
|
| >KOG0639|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-22 Score=185.79 Aligned_cols=215 Identities=16% Similarity=0.182 Sum_probs=174.7
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
.++.|||+..... ....++..-.-...+++.+|+. ++.+++..||.|.|||+.+...++.|++|.+.+.||..+
T Consensus 487 stlsiWDLAapTp-----rikaeltssapaCyALa~spDa-kvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis 560 (705)
T KOG0639|consen 487 STLSIWDLAAPTP-----RIKAELTSSAPACYALAISPDA-KVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS 560 (705)
T ss_pred ceeeeeeccCCCc-----chhhhcCCcchhhhhhhcCCcc-ceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEec
Confidence 4799999987632 2222344444567789999998 799999999999999999999999999999999999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD 308 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~ 308 (494)
+||..|.||+-|.+||.||+++++.+++..... ++.++-++|+ +..+++| ..++.+.|-....... .....
T Consensus 561 ~dGtklWTGGlDntvRcWDlregrqlqqhdF~S--QIfSLg~cP~-~dWlavG---Mens~vevlh~skp~k---yqlhl 631 (705)
T KOG0639|consen 561 KDGTKLWTGGLDNTVRCWDLREGRQLQQHDFSS--QIFSLGYCPT-GDWLAVG---MENSNVEVLHTSKPEK---YQLHL 631 (705)
T ss_pred CCCceeecCCCccceeehhhhhhhhhhhhhhhh--hheecccCCC-ccceeee---cccCcEEEEecCCccc---eeecc
Confidence 999999999999999999999998766544332 3788889998 6788888 7899999888765433 33344
Q ss_pred CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEe
Q psy14130 309 SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKL 383 (494)
Q Consensus 309 ~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l 383 (494)
|.+.|.++.|.+.|+++ ++.+.|+.+..|.+.-|..++. .+...+|.+...+-|..++|++ +....+|.+
T Consensus 632 heScVLSlKFa~cGkwf-vStGkDnlLnawrtPyGasiFq----skE~SsVlsCDIS~ddkyIVTGSGdkkATVYeV 703 (705)
T KOG0639|consen 632 HESCVLSLKFAYCGKWF-VSTGKDNLLNAWRTPYGASIFQ----SKESSSVLSCDISFDDKYIVTGSGDKKATVYEV 703 (705)
T ss_pred cccEEEEEEecccCcee-eecCchhhhhhccCccccceee----ccccCcceeeeeccCceEEEecCCCcceEEEEE
Confidence 77889999999999999 8888999999999988875433 2335789999999999999997 445677764
|
|
| >KOG0269|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.1e-23 Score=199.11 Aligned_cols=233 Identities=18% Similarity=0.255 Sum_probs=182.8
Q ss_pred EEEEEEcCcEEEEEcCCCCCCCCcccceEeccc---ccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCC---CeEEEEe
Q psy14130 142 AFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHG---HKRRVGYIEWHPTAENVVASAGFDYLIILWDVGK---GEALTVI 215 (494)
Q Consensus 142 ~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~---h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~---~~~~~~~ 215 (494)
.+++.+-..++||.+......... ...... -.-.+..+.|+...+++|||++..|.|.+||+.. .+.+..|
T Consensus 53 qiv~AGrs~lklyai~~~~~~~~~---~~~~k~kqn~~~S~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~~rnk~l~~f 129 (839)
T KOG0269|consen 53 QIVVAGRSLLKLYAINPNDFSEKC---NHRFKTKQNKFYSAADVKWGQLYSNLIATCSTNGVISVWDLNKSIRNKLLTVF 129 (839)
T ss_pred eeEEecccceeeEeeCcccCCcce---eeecccccceeeehhhcccccchhhhheeecCCCcEEEEecCccccchhhhHh
Confidence 344455556888888765432211 111111 1123556889877778999999999999999987 4566788
Q ss_pred cCCCCceEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEe
Q psy14130 216 DCHPDVINCLSFNR-DGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWD 294 (494)
Q Consensus 216 ~~h~~~v~~l~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd 294 (494)
..|+..++++.|++ ...+|+|||.||+|++||+|..+...++.+.... +..+.|+|..+..++++ .+.|.+++||
T Consensus 130 ~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSES-iRDV~fsp~~~~~F~s~---~dsG~lqlWD 205 (839)
T KOG0269|consen 130 NEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSES-IRDVKFSPGYGNKFASI---HDSGYLQLWD 205 (839)
T ss_pred hhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccchh-hhceeeccCCCceEEEe---cCCceEEEee
Confidence 99999999999999 4568999999999999999999988888886666 89999999989999999 6899999999
Q ss_pred CCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeee-
Q psy14130 295 ENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVT- 373 (494)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~- 373 (494)
+|....... +...|.+.|.++.|+|++.+| |||+.|+.|+|||+.+.+... ........|+..+.|-|.+...+.
T Consensus 206 lRqp~r~~~-k~~AH~GpV~c~nwhPnr~~l-ATGGRDK~vkiWd~t~~~~~~--~~tInTiapv~rVkWRP~~~~hLAt 281 (839)
T KOG0269|consen 206 LRQPDRCEK-KLTAHNGPVLCLNWHPNREWL-ATGGRDKMVKIWDMTDSRAKP--KHTINTIAPVGRVKWRPARSYHLAT 281 (839)
T ss_pred ccCchhHHH-HhhcccCceEEEeecCCCcee-eecCCCccEEEEeccCCCccc--eeEEeecceeeeeeeccCccchhhh
Confidence 998665433 333577899999999999888 999999999999999776422 222334688999999998775433
Q ss_pred ----ccceeEEEEeeC
Q psy14130 374 ----QCEIFRFFKLHT 385 (494)
Q Consensus 374 ----~~~~~~~~~l~~ 385 (494)
.|-.+++|++..
T Consensus 282 csmv~dtsV~VWDvrR 297 (839)
T KOG0269|consen 282 CSMVVDTSVHVWDVRR 297 (839)
T ss_pred hhccccceEEEEeecc
Confidence 478899999987
|
|
| >KOG1408|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.5e-22 Score=187.38 Aligned_cols=202 Identities=14% Similarity=0.200 Sum_probs=162.6
Q ss_pred ccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcC---CCCEEEEEeCCCeEEEEeCCCC
Q psy14130 175 HKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNR---DGSRLVTTCKDKTVRVLDPRTG 251 (494)
Q Consensus 175 h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~---~~~~l~s~~~d~~v~iwd~~~~ 251 (494)
..-.+.+++.+|+| +.||+|..-|+++++|+..-+....++.|+..|.|+.|+. ..++|++++.|+.|++||....
T Consensus 458 ~r~G~R~~~vSp~g-qhLAsGDr~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rn 536 (1080)
T KOG1408|consen 458 SRFGFRALAVSPDG-QHLASGDRGGNLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRN 536 (1080)
T ss_pred cccceEEEEECCCc-ceecccCccCceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccc
Confidence 45578999999999 7999999999999999999888889999999999999986 3579999999999999998644
Q ss_pred c-eEEEeeecCCCCceEEEEECCC------------------------------------------------CeEEEEEe
Q psy14130 252 L-VISQGVCHPGTRSSKAVFIGDT------------------------------------------------GRIVTTGF 282 (494)
Q Consensus 252 ~-~~~~~~~~~~~~~~~~~~~~~~------------------------------------------------~~l~~~g~ 282 (494)
- +++++.+|... ++.+.|...+ ..+++++
T Consensus 537 y~l~qtld~HSss-ITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~- 614 (1080)
T KOG1408|consen 537 YDLVQTLDGHSSS-ITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTV- 614 (1080)
T ss_pred cchhhhhcccccc-eeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEE-
Confidence 3 56666666655 5555554432 1223333
Q ss_pred cCCCCceEEEEeCCCCCCceeEeee-cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeE
Q psy14130 283 SRHSDRQVGLWDENDLNTPLALETV-DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRG 361 (494)
Q Consensus 283 ~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~ 361 (494)
+.|+.|+|||+.+++....+... ++.+....+..+|.|.+| ++.+.|.++.++|+-+++++.++ +.|...|++
T Consensus 615 --cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~-atScsdktl~~~Df~sgEcvA~m---~GHsE~VTG 688 (1080)
T KOG1408|consen 615 --CQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYL-ATSCSDKTLCFVDFVSGECVAQM---TGHSEAVTG 688 (1080)
T ss_pred --ecccceEEEeccccceeeeecccccCCCceEEEEECCCccEE-EEeecCCceEEEEeccchhhhhh---cCcchheee
Confidence 47999999999988776655543 344678889999999999 89999999999999999986444 345788999
Q ss_pred EEEecCCceee--eccceeEEEEeeC
Q psy14130 362 LGFMPKRGCDV--TQCEIFRFFKLHT 385 (494)
Q Consensus 362 ~~~~p~~~~~~--~~~~~~~~~~l~~ 385 (494)
+.|++|...++ ++|+.|-+|++..
T Consensus 689 ~kF~nDCkHlISvsgDgCIFvW~lp~ 714 (1080)
T KOG1408|consen 689 VKFLNDCKHLISVSGDGCIFVWKLPL 714 (1080)
T ss_pred eeecccchhheeecCCceEEEEECch
Confidence 99999987665 4799999999865
|
|
| >KOG0973|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.5e-22 Score=196.57 Aligned_cols=267 Identities=19% Similarity=0.223 Sum_probs=191.8
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 82 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~ 82 (494)
.-|.+.|+|+.|+| ||++||+||+|+.|. +|...... ....+. .+|+..-+
T Consensus 66 ~~h~~sv~CVR~S~-dG~~lAsGSDD~~v~-iW~~~~~~--~~~~fg------------------------s~g~~~~v- 116 (942)
T KOG0973|consen 66 DDHDGSVNCVRFSP-DGSYLASGSDDRLVM-IWERAEIG--SGTVFG------------------------STGGAKNV- 116 (942)
T ss_pred ccccCceeEEEECC-CCCeEeeccCcceEE-EeeecccC--Cccccc------------------------cccccccc-
Confidence 35999999999999 999999999998887 88653200 000000 00000000
Q ss_pred eccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCC
Q psy14130 83 PIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLS 162 (494)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~ 162 (494)
.+++ .......+..++.-+.|+|+-..++..+- +++|.||+..+.
T Consensus 117 ----------E~wk-------------~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~---------DnsViiwn~~tF--- 161 (942)
T KOG0973|consen 117 ----------ESWK-------------VVSILRGHDSDVLDVNWSPDDSLLVSVSL---------DNSVIIWNAKTF--- 161 (942)
T ss_pred ----------ceee-------------EEEEEecCCCccceeccCCCccEEEEecc---------cceEEEEccccc---
Confidence 0000 01111123345555666654433333222 247999999887
Q ss_pred CCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCC------CceEEEEEcCCCCEEEE
Q psy14130 163 GNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHP------DVINCLSFNRDGSRLVT 236 (494)
Q Consensus 163 ~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~------~~v~~l~~~~~~~~l~s 236 (494)
+.+..+.+|.+.|..+.|.|.| ++|||-+.|++|++|++.+-...+.+.++- ..+..+.|+|||.+|++
T Consensus 162 ----~~~~vl~~H~s~VKGvs~DP~G-ky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las 236 (942)
T KOG0973|consen 162 ----ELLKVLRGHQSLVKGVSWDPIG-KYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLAS 236 (942)
T ss_pred ----eeeeeeecccccccceEECCcc-CeeeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecc
Confidence 7788999999999999999999 799999999999999987766666665443 35778999999999998
Q ss_pred EeC----CCeEEEEeCCCCceEEEeeecCCCCceEEEEECC----C--------C----eEEEEEecCCCCceEEEEeCC
Q psy14130 237 TCK----DKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGD----T--------G----RIVTTGFSRHSDRQVGLWDEN 296 (494)
Q Consensus 237 ~~~----d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~----~--------~----~l~~~g~~~~~d~~i~iwd~~ 296 (494)
.-. -.++.|.+-.+.+.-..+.+|..+ +..+.|+|. . . .++|+| +.|++|.||...
T Consensus 237 ~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p-~evvrFnP~lfe~~~~ng~~~~~~~~y~i~Avg---SqDrSlSVW~T~ 312 (942)
T KOG0973|consen 237 PNAVNGGKSTIAIIERGTWKVDKDLVGHSAP-VEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVG---SQDRSLSVWNTA 312 (942)
T ss_pred hhhccCCcceeEEEecCCceeeeeeecCCCc-eEEEEeChHHhccccccCCccCCCcceEEEEEe---cCCccEEEEecC
Confidence 743 357889998888888899999997 888999872 1 1 178889 999999999986
Q ss_pred CCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCC
Q psy14130 297 DLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNER 344 (494)
Q Consensus 297 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~ 344 (494)
..+.......+ ....|..+.|+|||-.| .++|.||+|.++.++..+
T Consensus 313 ~~RPl~vi~~l-f~~SI~DmsWspdG~~L-facS~DGtV~~i~Fee~E 358 (942)
T KOG0973|consen 313 LPRPLFVIHNL-FNKSIVDMSWSPDGFSL-FACSLDGTVALIHFEEKE 358 (942)
T ss_pred CCCchhhhhhh-hcCceeeeeEcCCCCeE-EEEecCCeEEEEEcchHH
Confidence 54433333222 34689999999999999 566799999999997643
|
|
| >KOG0278|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-23 Score=175.91 Aligned_cols=213 Identities=22% Similarity=0.344 Sum_probs=182.4
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcC
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNR 229 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~ 229 (494)
+-.+-+-+++ .++.++.||.+.|.+...+.+. ...|+++.|-+-++||.-+|..+.+|+ |...|.+++|+.
T Consensus 40 ~pmlr~g~tg-------dwigtfeghkgavw~~~l~~na-~~aasaaadftakvw~a~tgdelhsf~-hkhivk~~af~~ 110 (334)
T KOG0278|consen 40 KPMLRNGDTG-------DWIGTFEGHKGAVWSATLNKNA-TRAASAAADFTAKVWDAVTGDELHSFE-HKHIVKAVAFSQ 110 (334)
T ss_pred CchhccCCCC-------CcEEeeeccCcceeeeecCchh-hhhhhhcccchhhhhhhhhhhhhhhhh-hhheeeeEEecc
Confidence 3445555666 8899999999999999999997 789999999999999999999999998 999999999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCc-eEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec
Q psy14130 230 DGSRLVTTCKDKTVRVLDPRTGL-VISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD 308 (494)
Q Consensus 230 ~~~~l~s~~~d~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~ 308 (494)
|.++|++|+.++.+||||++..+ +..++.+|.+. +..+.|+..+..+|++. .|++||+||.+++.. ++.+.
T Consensus 111 ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~-Ir~v~wc~eD~~iLSSa----dd~tVRLWD~rTgt~---v~sL~ 182 (334)
T KOG0278|consen 111 DSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGG-IRTVLWCHEDKCILSSA----DDKTVRLWDHRTGTE---VQSLE 182 (334)
T ss_pred cchhhhccchHHHhhhhhccCCCCCchhhcCCCCc-ceeEEEeccCceEEeec----cCCceEEEEeccCcE---EEEEe
Confidence 99999999999999999998876 67788999998 99999999878888877 899999999998765 34444
Q ss_pred CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccceeEEEEeeC
Q psy14130 309 SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 309 ~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~~ 385 (494)
....|.++.++++|++| .+ ...+.|.+||..+-.. +..+..+..|.+..++|+...+|++++..++++..-
T Consensus 183 ~~s~VtSlEvs~dG~il-Ti-a~gssV~Fwdaksf~~----lKs~k~P~nV~SASL~P~k~~fVaGged~~~~kfDy 253 (334)
T KOG0278|consen 183 FNSPVTSLEVSQDGRIL-TI-AYGSSVKFWDAKSFGL----LKSYKMPCNVESASLHPKKEFFVAGGEDFKVYKFDY 253 (334)
T ss_pred cCCCCcceeeccCCCEE-EE-ecCceeEEeccccccc----eeeccCccccccccccCCCceEEecCcceEEEEEec
Confidence 56789999999999988 43 4677899999988554 455566778999999999999999877777666554
|
|
| >KOG0647|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.6e-21 Score=167.91 Aligned_cols=241 Identities=17% Similarity=0.210 Sum_probs=175.8
Q ss_pred CCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCe
Q psy14130 121 SHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYL 200 (494)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~ 200 (494)
+..++++|..--+...++-+| +||+|++...+.. .+ .....|.++|.+++|+.+| ..+++|+.|+.
T Consensus 30 IS~l~FSP~~~~~~~A~SWD~--------tVR~wevq~~g~~----~~-ka~~~~~~PvL~v~Wsddg-skVf~g~~Dk~ 95 (347)
T KOG0647|consen 30 ISALAFSPQADNLLAAGSWDG--------TVRIWEVQNSGQL----VP-KAQQSHDGPVLDVCWSDDG-SKVFSGGCDKQ 95 (347)
T ss_pred hheeEeccccCceEEecccCC--------ceEEEEEecCCcc----cc-hhhhccCCCeEEEEEccCC-ceEEeeccCCc
Confidence 345556663322332334443 7999999885332 22 4556799999999999999 79999999999
Q ss_pred EEEEECCCCeEEEEecCCCCceEEEEEcCCCC--EEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEE
Q psy14130 201 IILWDVGKGEALTVIDCHPDVINCLSFNRDGS--RLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIV 278 (494)
Q Consensus 201 v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~--~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 278 (494)
+++||+.+++ +..+..|.++|..+.|-+... .|+|||.|++|++||+|+..++.++..... +..+... ..++
T Consensus 96 ~k~wDL~S~Q-~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeR--vYa~Dv~---~pm~ 169 (347)
T KOG0647|consen 96 AKLWDLASGQ-VSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPER--VYAADVL---YPMA 169 (347)
T ss_pred eEEEEccCCC-eeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccce--eeehhcc---Ccee
Confidence 9999999995 566777999999999998665 899999999999999999998888775543 4444333 2355
Q ss_pred EEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEeccc-ccC--
Q psy14130 279 TTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQ-SLS-- 355 (494)
Q Consensus 279 ~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~-~~~-- 355 (494)
+++ ..++.|.+|++++.............-.+++++...|.... +.|+-+|.+.+..+..+.+...+.-. |+.
T Consensus 170 vVa---ta~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~-alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~ 245 (347)
T KOG0647|consen 170 VVA---TAERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGF-ALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTN 245 (347)
T ss_pred EEE---ecCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCce-EeeeecceEEEEecCCCCccCceeEEEeccCC
Confidence 666 57999999999875443333222334568888888888777 88999999999999886332111111 111
Q ss_pred -----CCCeeEEEEecCCceeee--ccceeEEEEeeC
Q psy14130 356 -----GAPQRGLGFMPKRGCDVT--QCEIFRFFKLHT 385 (494)
Q Consensus 356 -----~~~v~~~~~~p~~~~~~~--~~~~~~~~~l~~ 385 (494)
-..|.+|+|+|....+++ +||...+|+-..
T Consensus 246 ~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkda 282 (347)
T KOG0647|consen 246 SVNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDA 282 (347)
T ss_pred CCCCceEEecceEeecccceEEEecCCceEEEecchh
Confidence 135888999998887777 499999999655
|
|
| >KOG0640|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.2e-22 Score=173.71 Aligned_cols=215 Identities=17% Similarity=0.235 Sum_probs=171.4
Q ss_pred eEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCC------------C------eEEEEecCCCCceEEEEEcCC
Q psy14130 169 IMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGK------------G------EALTVIDCHPDVINCLSFNRD 230 (494)
Q Consensus 169 ~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~------------~------~~~~~~~~h~~~v~~l~~~~~ 230 (494)
...+..|+.++.+.+|+|+| .++|+||.|-.|+|.|++. + -.++++-.|.+.|+++.|+|.
T Consensus 105 t~ylt~HK~~cR~aafs~DG-~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPr 183 (430)
T KOG0640|consen 105 TKYLTSHKSPCRAAAFSPDG-SLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPR 183 (430)
T ss_pred eEEEeecccceeeeeeCCCC-cEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecch
Confidence 45677899999999999999 7999999999999999861 1 146777789999999999999
Q ss_pred CCEEEEEeCCCeEEEEeCCCCceEEEeeec-CCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEe-eec
Q psy14130 231 GSRLVTTCKDKTVRVLDPRTGLVISQGVCH-PGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALE-TVD 308 (494)
Q Consensus 231 ~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~-~~~ 308 (494)
...|++|+.|++|++||.......+.++.- ....+.++.|+|. +.++.+| ....++++||+.+.+.-.... ...
T Consensus 184 e~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPs-Gefllvg---TdHp~~rlYdv~T~QcfvsanPd~q 259 (430)
T KOG0640|consen 184 ETILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPS-GEFLLVG---TDHPTLRLYDVNTYQCFVSANPDDQ 259 (430)
T ss_pred hheEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCC-CceEEEe---cCCCceeEEeccceeEeeecCcccc
Confidence 999999999999999999865433222211 1122788899998 5566666 588899999998755432221 224
Q ss_pred CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEeeCC
Q psy14130 309 SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHTT 386 (494)
Q Consensus 309 ~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~~ 386 (494)
|...|.++.|++.+++. ++|+.||.|++||=-+++++..+-..+ .+..|.+..|..++.+++++ |.++++|.+.++
T Consensus 260 ht~ai~~V~Ys~t~~lY-vTaSkDG~IklwDGVS~rCv~t~~~AH-~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~ 337 (430)
T KOG0640|consen 260 HTGAITQVRYSSTGSLY-VTASKDGAIKLWDGVSNRCVRTIGNAH-GGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTG 337 (430)
T ss_pred cccceeEEEecCCccEE-EEeccCCcEEeeccccHHHHHHHHhhc-CCceeeeEEEccCCeEEeecCCcceeeeeeecCC
Confidence 66889999999999887 999999999999999998865554444 36789999999999999885 999999999986
Q ss_pred CCeE
Q psy14130 387 RNMC 390 (494)
Q Consensus 387 ~~~~ 390 (494)
+...
T Consensus 338 R~l~ 341 (430)
T KOG0640|consen 338 RMLK 341 (430)
T ss_pred ceEE
Confidence 5333
|
|
| >KOG0270|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-21 Score=177.30 Aligned_cols=206 Identities=18% Similarity=0.211 Sum_probs=164.7
Q ss_pred ccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcC-CCCEEEEEeCCCeEEEEeCCCC
Q psy14130 173 HGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNR-DGSRLVTTCKDKTVRVLDPRTG 251 (494)
Q Consensus 173 ~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~-~~~~l~s~~~d~~v~iwd~~~~ 251 (494)
.+|+..|.+++|+..-.++|||||.|.+|++||+.++++..++..|.+.|.++.|+| ....|++|+.|++|.+.|+|..
T Consensus 240 ~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~ 319 (463)
T KOG0270|consen 240 SGHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDP 319 (463)
T ss_pred ccchHHHHHHHhccccceeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCc
Confidence 479999999999998889999999999999999999999999999999999999999 5679999999999999999953
Q ss_pred c-eEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEe
Q psy14130 252 L-VISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGK 330 (494)
Q Consensus 252 ~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~ 330 (494)
. .-..+..- + .+-.++|.+.....+.+| ..||+|+-+|+|+...+.-. ...|..+|.++.+++....++++++
T Consensus 320 ~~s~~~wk~~-g-~VEkv~w~~~se~~f~~~---tddG~v~~~D~R~~~~~vwt-~~AHd~~ISgl~~n~~~p~~l~t~s 393 (463)
T KOG0270|consen 320 SNSGKEWKFD-G-EVEKVAWDPHSENSFFVS---TDDGTVYYFDIRNPGKPVWT-LKAHDDEISGLSVNIQTPGLLSTAS 393 (463)
T ss_pred cccCceEEec-c-ceEEEEecCCCceeEEEe---cCCceEEeeecCCCCCceeE-EEeccCCcceEEecCCCCcceeecc
Confidence 3 22233322 2 288999999988888888 89999999999987654433 3347789999999999998889999
Q ss_pred CCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeee-c--cceeEEEEeeC
Q psy14130 331 GDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVT-Q--CEIFRFFKLHT 385 (494)
Q Consensus 331 ~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~-~--~~~~~~~~l~~ 385 (494)
.|+.+++|++....+....-..+. -+...++++.|+-....+ + .+.+|+|++.+
T Consensus 394 ~d~~Vklw~~~~~~~~~v~~~~~~-~~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~~ 450 (463)
T KOG0270|consen 394 TDKVVKLWKFDVDSPKSVKEHSFK-LGRLHCFALDPDVAFTLAFGGEKAVLRVWDIFT 450 (463)
T ss_pred ccceEEEEeecCCCCccccccccc-ccceeecccCCCcceEEEecCccceEEEeeccc
Confidence 999999999987765222222221 133566777776554333 3 45689999877
|
|
| >KOG0772|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.6e-22 Score=183.37 Aligned_cols=211 Identities=17% Similarity=0.320 Sum_probs=164.6
Q ss_pred eEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe----EEEEec-CCCCceEEEEEcCCCCEEEEEeCCCeE
Q psy14130 169 IMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE----ALTVID-CHPDVINCLSFNRDGSRLVTTCKDKTV 243 (494)
Q Consensus 169 ~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~----~~~~~~-~h~~~v~~l~~~~~~~~l~s~~~d~~v 243 (494)
...+.+|+..|.++++.|.| -.|+|||.|.+|++||+..-. ..+.++ .....|.+++|++.|..|++.+.....
T Consensus 160 Ei~l~hgtk~Vsal~~Dp~G-aR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqa 238 (641)
T KOG0772|consen 160 EIQLKHGTKIVSALAVDPSG-ARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQA 238 (641)
T ss_pred eEeccCCceEEEEeeecCCC-ceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCcce
Confidence 35788899999999999999 699999999999999996432 122232 245679999999999999999999999
Q ss_pred EEEeCCCCceEEE------------eeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee----
Q psy14130 244 RVLDPRTGLVISQ------------GVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV---- 307 (494)
Q Consensus 244 ~iwd~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~---- 307 (494)
+|+|-...+.+.. -++|... +.+.+|+|.....+.++ +.|+++||||+.+......+...
T Consensus 239 kl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~-lt~g~whP~~k~~FlT~---s~DgtlRiWdv~~~k~q~qVik~k~~~ 314 (641)
T KOG0772|consen 239 KLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAE-LTCGCWHPDNKEEFLTC---SYDGTLRIWDVNNTKSQLQVIKTKPAG 314 (641)
T ss_pred eEEccCCceeeeeeccchhhhhhhccCCceee-eeccccccCcccceEEe---cCCCcEEEEecCCchhheeEEeeccCC
Confidence 9999653332222 2466665 88889999877666666 69999999999876654444322
Q ss_pred cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCC--CceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEe
Q psy14130 308 DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNE--RPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKL 383 (494)
Q Consensus 308 ~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~--~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l 383 (494)
.....+..++|++|++.+ ++|+.||.|.+|+.... ++....-..|..+..|++|+|+++|.++++. |+.+++|+|
T Consensus 315 g~Rv~~tsC~~nrdg~~i-Aagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDL 393 (641)
T KOG0772|consen 315 GKRVPVTSCAWNRDGKLI-AAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDL 393 (641)
T ss_pred CcccCceeeecCCCcchh-hhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeec
Confidence 122457889999999997 99999999999998543 3334444456666789999999999999984 999999999
Q ss_pred eC
Q psy14130 384 HT 385 (494)
Q Consensus 384 ~~ 385 (494)
..
T Consensus 394 rq 395 (641)
T KOG0772|consen 394 RQ 395 (641)
T ss_pred cc
Confidence 87
|
|
| >KOG0302|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=2e-21 Score=172.11 Aligned_cols=177 Identities=22% Similarity=0.325 Sum_probs=143.6
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe--EEEEecCCCCceEEEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE--ALTVIDCHPDVINCLSF 227 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~--~~~~~~~h~~~v~~l~~ 227 (494)
.|++|...++.-. .-...+.+|+..|-.++|+|....+|||||.||+|+|||++.+. .....+.|.+.|+.|.|
T Consensus 235 ~I~lw~~~~g~W~----vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~sDVNVISW 310 (440)
T KOG0302|consen 235 GIHLWEPSTGSWK----VDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHNSDVNVISW 310 (440)
T ss_pred ceEeeeeccCcee----ecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEeeccCCceeeEEc
Confidence 5999998886321 22345778999999999999988999999999999999999873 22233889999999999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCC---ceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCC----
Q psy14130 228 NRDGSRLVTTCKDKTVRVLDPRTG---LVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNT---- 300 (494)
Q Consensus 228 ~~~~~~l~s~~~d~~v~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~---- 300 (494)
+..-.+|++|+.||+++|||+|+- +++.+++.|..+ ++++.|+|.....++++ +.|.+|.|||+.-...
T Consensus 311 nr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~p-ItsieW~p~e~s~iaas---g~D~QitiWDlsvE~D~ee~ 386 (440)
T KOG0302|consen 311 NRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAP-ITSIEWHPHEDSVIAAS---GEDNQITIWDLSVEADEEEI 386 (440)
T ss_pred cCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCC-eeEEEeccccCceEEec---cCCCcEEEEEeeccCChhhh
Confidence 998889999999999999999864 588999999998 99999999888888887 7999999999752111
Q ss_pred ------------ceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCc
Q psy14130 301 ------------PLALETVDSSSGVLFPYYDHDTRILFLAGKGDGN 334 (494)
Q Consensus 301 ------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~ 334 (494)
|..+..+.+...+..+.|+++-.-++++.+.||.
T Consensus 387 ~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa~dGf 432 (440)
T KOG0302|consen 387 DQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAIDGF 432 (440)
T ss_pred ccccccchhcCCceeEEEecchhHhhhheeccCCCCeEEEecccce
Confidence 1122233345677889999988777788888884
|
|
| >KOG0302|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.4e-21 Score=171.59 Aligned_cols=227 Identities=17% Similarity=0.259 Sum_probs=169.9
Q ss_pred cEEEEEcCCCC-------C--CCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEE---EEecC
Q psy14130 150 RVKLWYIPDGG-------L--SGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEAL---TVIDC 217 (494)
Q Consensus 150 ~v~iw~~~~~~-------~--~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~---~~~~~ 217 (494)
+|+||++...- . ......++.++.+|...=+.++|||-....|+||..-+.|++|...++.-. ..+.+
T Consensus 176 ~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~g 255 (440)
T KOG0302|consen 176 RVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGRLLSGDCVKGIHLWEPSTGSWKVDQRPFTG 255 (440)
T ss_pred cEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecccccccccccCccccceEeeeeccCceeecCccccc
Confidence 69999985421 1 122347888999999999999999965446999988899999999887532 34667
Q ss_pred CCCceEEEEEcCC-CCEEEEEeCCCeEEEEeCCCCc---eEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEE
Q psy14130 218 HPDVINCLSFNRD-GSRLVTTCKDKTVRVLDPRTGL---VISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLW 293 (494)
Q Consensus 218 h~~~v~~l~~~~~-~~~l~s~~~d~~v~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iw 293 (494)
|+..|-.|+|+|. ...|+|||.|++|+|||+|.+. ++.. ++|.+. ++.+.|+..-+ +|++| +.||+++||
T Consensus 256 H~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~-kAh~sD-VNVISWnr~~~-lLasG---~DdGt~~iw 329 (440)
T KOG0302|consen 256 HTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVST-KAHNSD-VNVISWNRREP-LLASG---GDDGTLSIW 329 (440)
T ss_pred cccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEe-eccCCc-eeeEEccCCcc-eeeec---CCCceEEEE
Confidence 9999999999995 4589999999999999999983 4444 788886 99999999855 88999 899999999
Q ss_pred eCCCCCCceeEeee-cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCc--------e-------EEecccccCCC
Q psy14130 294 DENDLNTPLALETV-DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERP--------Y-------IHFLNQSLSGA 357 (494)
Q Consensus 294 d~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~--------~-------~~~~~~~~~~~ 357 (494)
|+|..+....+..+ .|..+|+++.|+|....++++++.|..|.+||+..... . ..++--|....
T Consensus 330 DLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsvE~D~ee~~~~a~~~L~dlPpQLLFVHqGQk 409 (440)
T KOG0302|consen 330 DLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLSVEADEEEIDQEAAEGLQDLPPQLLFVHQGQK 409 (440)
T ss_pred EhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEeeccCChhhhccccccchhcCCceeEEEecchh
Confidence 99976543222222 36689999999998888879999999999999975432 0 11222233445
Q ss_pred CeeEEEEecCCc-eeee-ccceeEEEE
Q psy14130 358 PQRGLGFMPKRG-CDVT-QCEIFRFFK 382 (494)
Q Consensus 358 ~v~~~~~~p~~~-~~~~-~~~~~~~~~ 382 (494)
.+..+.|++... ++++ +-.-+.+|+
T Consensus 410 e~KevhWH~QiPG~lvsTa~dGfnVfk 436 (440)
T KOG0302|consen 410 EVKEVHWHRQIPGLLVSTAIDGFNVFK 436 (440)
T ss_pred HhhhheeccCCCCeEEEecccceeEEE
Confidence 688899998643 3333 333344544
|
|
| >KOG1036|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=3e-20 Score=160.81 Aligned_cols=206 Identities=16% Similarity=0.200 Sum_probs=152.6
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcC
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNR 229 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~ 229 (494)
.|+.+|+.++.. ..+..|...|.|+..++.. ..+++||+|++|++||.+.......+. ....|.++..+
T Consensus 76 ~vr~~Dln~~~~--------~~igth~~~i~ci~~~~~~-~~vIsgsWD~~ik~wD~R~~~~~~~~d-~~kkVy~~~v~- 144 (323)
T KOG1036|consen 76 QVRRYDLNTGNE--------DQIGTHDEGIRCIEYSYEV-GCVISGSWDKTIKFWDPRNKVVVGTFD-QGKKVYCMDVS- 144 (323)
T ss_pred eEEEEEecCCcc--------eeeccCCCceEEEEeeccC-CeEEEcccCccEEEEeccccccccccc-cCceEEEEecc-
Confidence 699999998732 3455699999999999876 699999999999999998766666665 34588888775
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceEEE-eeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCC----CCceeE
Q psy14130 230 DGSRLVTTCKDKTVRVLDPRTGLVISQ-GVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDL----NTPLAL 304 (494)
Q Consensus 230 ~~~~l~s~~~d~~v~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~----~~~~~~ 304 (494)
|+.|+.|+.|..+.+||+++.....+ ....-...+.++++.|+++-+ +++ +-||.|.+=.+... .....+
T Consensus 145 -g~~LvVg~~~r~v~iyDLRn~~~~~q~reS~lkyqtR~v~~~pn~eGy-~~s---SieGRVavE~~d~s~~~~skkyaF 219 (323)
T KOG1036|consen 145 -GNRLVVGTSDRKVLIYDLRNLDEPFQRRESSLKYQTRCVALVPNGEGY-VVS---SIEGRVAVEYFDDSEEAQSKKYAF 219 (323)
T ss_pred -CCEEEEeecCceEEEEEcccccchhhhccccceeEEEEEEEecCCCce-EEE---eecceEEEEccCCchHHhhhceeE
Confidence 77899999999999999998763322 122222336778888864444 444 47999887655433 112222
Q ss_pred eee-------cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeecc
Q psy14130 305 ETV-------DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQC 375 (494)
Q Consensus 305 ~~~-------~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~ 375 (494)
..+ .-..+|.+++|+|--+.+ +||+.||.|.+||+.+.+.+..+ .. ....|.+++|+-+|.+++.++
T Consensus 220 kCHr~~~~~~~~~yPVNai~Fhp~~~tf-aTgGsDG~V~~Wd~~~rKrl~q~-~~--~~~SI~slsfs~dG~~LAia~ 293 (323)
T KOG1036|consen 220 KCHRLSEKDTEIIYPVNAIAFHPIHGTF-ATGGSDGIVNIWDLFNRKRLKQL-AK--YETSISSLSFSMDGSLLAIAS 293 (323)
T ss_pred EeeecccCCceEEEEeceeEeccccceE-EecCCCceEEEccCcchhhhhhc-cC--CCCceEEEEeccCCCeEEEEe
Confidence 111 112468899999998888 99999999999999998765333 22 256799999999999998864
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.1e-19 Score=169.56 Aligned_cols=227 Identities=14% Similarity=0.134 Sum_probs=163.2
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.|++||..++ +....+..+.. +..++|+|++..++++++.|+.|++||+.+++.+..+.. ...+.+++|+
T Consensus 53 ~~v~~~d~~~~-------~~~~~~~~~~~-~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~~-~~~~~~~~~~ 123 (300)
T TIGR03866 53 DTIQVIDLATG-------EVIGTLPSGPD-PELFALHPNGKILYIANEDDNLVTVIDIETRKVLAEIPV-GVEPEGMAVS 123 (300)
T ss_pred CeEEEEECCCC-------cEEEeccCCCC-ccEEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEeeC-CCCcceEEEC
Confidence 46999999887 33444444433 567899999853445666789999999999888777763 3457889999
Q ss_pred CCCCEEEEEeCCC-eEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee
Q psy14130 229 RDGSRLVTTCKDK-TVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV 307 (494)
Q Consensus 229 ~~~~~l~s~~~d~-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~ 307 (494)
|+|+++++++.++ .+.+||.++++.+........ +..+.|++++..+++++ ..++.|++||+++......+...
T Consensus 124 ~dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~--~~~~~~s~dg~~l~~~~---~~~~~v~i~d~~~~~~~~~~~~~ 198 (300)
T TIGR03866 124 PDGKIVVNTSETTNMAHFIDTKTYEIVDNVLVDQR--PRFAEFTADGKELWVSS---EIGGTVSVIDVATRKVIKKITFE 198 (300)
T ss_pred CCCCEEEEEecCCCeEEEEeCCCCeEEEEEEcCCC--ccEEEECCCCCEEEEEc---CCCCEEEEEEcCcceeeeeeeec
Confidence 9999999988765 577889998876655443322 56788999977776766 56899999999876432222110
Q ss_pred c-----CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec---cceeE
Q psy14130 308 D-----SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ---CEIFR 379 (494)
Q Consensus 308 ~-----~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~---~~~~~ 379 (494)
. .......++|+|+++.++++...++.|.+||+++++..... .....+.+++|+|++..++++ ++.++
T Consensus 199 ~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~~~~~----~~~~~~~~~~~~~~g~~l~~~~~~~~~i~ 274 (300)
T TIGR03866 199 IPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKTYEVLDYL----LVGQRVWQLAFTPDEKYLLTTNGVSNDVS 274 (300)
T ss_pred ccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEE----EeCCCcceEEECCCCCEEEEEcCCCCeEE
Confidence 0 11123457899999998777777888999999887753322 124568999999999887653 78999
Q ss_pred EEEeeCCCCeEEEeE
Q psy14130 380 FFKLHTTRNMCEPIS 394 (494)
Q Consensus 380 ~~~l~~~~~~~~~~~ 394 (494)
+|++.. ...+..+.
T Consensus 275 v~d~~~-~~~~~~~~ 288 (300)
T TIGR03866 275 VIDVAA-LKVIKSIK 288 (300)
T ss_pred EEECCC-CcEEEEEE
Confidence 999988 33455443
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >KOG0288|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.2e-22 Score=178.29 Aligned_cols=219 Identities=19% Similarity=0.242 Sum_probs=182.9
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcC
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNR 229 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~ 229 (494)
.|++|+....+. +.+.+|.|..+.|+++.|.+++ ..+++++.|+.+++|++...+...++.+|.+.|+++.|..
T Consensus 198 ~Ik~W~v~~~k~-----~~~~tLaGs~g~it~~d~d~~~-~~~iAas~d~~~r~Wnvd~~r~~~TLsGHtdkVt~ak~~~ 271 (459)
T KOG0288|consen 198 IIKLWNVLGEKS-----ELISTLAGSLGNITSIDFDSDN-KHVIAASNDKNLRLWNVDSLRLRHTLSGHTDKVTAAKFKL 271 (459)
T ss_pred hhhhhhcccchh-----hhhhhhhccCCCcceeeecCCC-ceEEeecCCCceeeeeccchhhhhhhcccccceeeehhhc
Confidence 599999887643 5677889999999999999998 6888899999999999999999999999999999999998
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecC
Q psy14130 230 DGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDS 309 (494)
Q Consensus 230 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 309 (494)
....+++|+.|.+|++||+....+..++..-.. +..++.. ...+++| ..|+.|++||+++..... ..+.
T Consensus 272 ~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~~S~--cnDI~~~---~~~~~Sg---H~DkkvRfwD~Rs~~~~~---sv~~ 340 (459)
T KOG0288|consen 272 SHSRVVSGSADRTIKLWDLQKAYCSKTVLPGSQ--CNDIVCS---ISDVISG---HFDKKVRFWDIRSADKTR---SVPL 340 (459)
T ss_pred cccceeeccccchhhhhhhhhhheecccccccc--ccceEec---ceeeeec---ccccceEEEeccCCceee---Eeec
Confidence 877799999999999999999888877654433 4555554 4577788 789999999999865533 3345
Q ss_pred CCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEec-ccccCCCCeeEEEEecCCceeeec--cceeEEEEeeCC
Q psy14130 310 SSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFL-NQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHTT 386 (494)
Q Consensus 310 ~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~-~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~~ 386 (494)
.+.|.++..++++..| ++++.|.++.+.|+++.+....+. ..+....-.+.+.|+|++.+++++ |+.++||++.++
T Consensus 341 gg~vtSl~ls~~g~~l-LsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tg 419 (459)
T KOG0288|consen 341 GGRVTSLDLSMDGLEL-LSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTG 419 (459)
T ss_pred CcceeeEeeccCCeEE-eeecCCCceeeeecccccEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEccCc
Confidence 5689999999999999 666899999999999977544432 234555668999999999999986 999999999884
|
|
| >KOG0268|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.7e-22 Score=174.20 Aligned_cols=182 Identities=15% Similarity=0.270 Sum_probs=152.1
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
.+|.|||.... .|+..+.-....|.++.|+|....+|++|+.|+.|.++|++++.++..+. ..-.-+.|+|+
T Consensus 167 e~i~IWD~~R~-------~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi-~~mRTN~Iswn 238 (433)
T KOG0268|consen 167 EQIDIWDEQRD-------NPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVI-LTMRTNTICWN 238 (433)
T ss_pred ceeeecccccC-------CccceeecCCCceeEEecCCCcchheeeeccCCceEEEecccCCccceee-eeccccceecC
Confidence 36999998776 67777877788999999999988899999999999999999999887665 34556789999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCc-eEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGL-VISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV 307 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~ 307 (494)
|.+-.+++|+.|..+..||++.-+ ++....+|.+. +..+.|+|.|..+++++ -|.+|+||..+......... .
T Consensus 239 PeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsA-V~dVdfsptG~Efvsgs----yDksIRIf~~~~~~SRdiYh-t 312 (433)
T KOG0268|consen 239 PEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSA-VMDVDFSPTGQEFVSGS----YDKSIRIFPVNHGHSRDIYH-T 312 (433)
T ss_pred ccccceeeccccccceehhhhhhcccchhhccccee-EEEeccCCCcchhcccc----ccceEEEeecCCCcchhhhh-H
Confidence 988899999999999999999765 77788899888 99999999976666665 79999999988655432221 1
Q ss_pred cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCc
Q psy14130 308 DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERP 345 (494)
Q Consensus 308 ~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~ 345 (494)
.-...|.++.|+.|.+++ ++||.|++|++|.....+.
T Consensus 313 kRMq~V~~Vk~S~Dskyi-~SGSdd~nvRlWka~Asek 349 (433)
T KOG0268|consen 313 KRMQHVFCVKYSMDSKYI-ISGSDDGNVRLWKAKASEK 349 (433)
T ss_pred hhhheeeEEEEeccccEE-EecCCCcceeeeecchhhh
Confidence 223579999999999999 9999999999999876543
|
|
| >KOG2106|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.2e-19 Score=163.76 Aligned_cols=318 Identities=18% Similarity=0.190 Sum_probs=213.1
Q ss_pred ccceeeEEECCCCC-eeEEee--cCCCcEEEEeeeeccccccc----cc--CcccccccccceeecCCceEEEEEEEecC
Q psy14130 6 RGPVLDIKWNPFND-NIIASC--SDDCTFRHVYGVHSKRDGCY----DN--VPITRNAHDSHFCAANPKFVAVVTEVAGG 76 (494)
Q Consensus 6 ~~~V~~v~fsp~~~-~~l~sg--s~Dg~vr~~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (494)
..+|+||+|++.++ .+|..- |.+..+. +|+|..+..... .. +.....+.+.+++..-++....+|...++
T Consensus 154 ~~GV~~vaFsk~~~G~~l~~vD~s~~h~lS-VWdWqk~~~~~~vk~sne~v~~a~FHPtd~nliit~Gk~H~~Fw~~~~~ 232 (626)
T KOG2106|consen 154 DRGVTCVAFSKINGGSLLCAVDDSNPHMLS-VWDWQKKAKLGPVKTSNEVVFLATFHPTDPNLIITCGKGHLYFWTLRGG 232 (626)
T ss_pred cccceeeeecccCCCceEEEecCCCccccc-hhhchhhhccCcceeccceEEEEEeccCCCcEEEEeCCceEEEEEccCC
Confidence 45799999998554 444332 3344455 899875442111 11 12234455666666667777777776665
Q ss_pred ceEEEEeccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEc
Q psy14130 77 GAFLVLPIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYI 156 (494)
Q Consensus 77 g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~ 156 (494)
+.+.-..+-. ... .+++.......+|..+..-..+.|.||+.
T Consensus 233 ~l~k~~~~fe--------------k~e------------------------kk~Vl~v~F~engdviTgDS~G~i~Iw~~ 274 (626)
T KOG2106|consen 233 SLVKRQGIFE--------------KRE------------------------KKFVLCVTFLENGDVITGDSGGNILIWSK 274 (626)
T ss_pred ceEEEeeccc--------------ccc------------------------ceEEEEEEEcCCCCEEeecCCceEEEEeC
Confidence 5444322211 100 01111122222222223333457999998
Q ss_pred CCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe-----------E--------------
Q psy14130 157 PDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE-----------A-------------- 211 (494)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~-----------~-------------- 211 (494)
.+. ...+....|.+.|.+++.-.+| .|+||+.|+.|..||-.-.+ .
T Consensus 275 ~~~-------~~~k~~~aH~ggv~~L~~lr~G--tllSGgKDRki~~Wd~~y~k~r~~elPe~~G~iRtv~e~~~di~vG 345 (626)
T KOG2106|consen 275 GTN-------RISKQVHAHDGGVFSLCMLRDG--TLLSGGKDRKIILWDDNYRKLRETELPEQFGPIRTVAEGKGDILVG 345 (626)
T ss_pred CCc-------eEEeEeeecCCceEEEEEecCc--cEeecCccceEEeccccccccccccCchhcCCeeEEecCCCcEEEe
Confidence 766 3334444899999999999998 56779999999999841000 0
Q ss_pred ---------------EEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCe
Q psy14130 212 ---------------LTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGR 276 (494)
Q Consensus 212 ---------------~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (494)
.....+|.+....++.+|+..+++|++.|+.+++|+ ..+++.+...... ..++.|+|.+
T Consensus 346 TtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~~k~~wt~~~~d~--~~~~~fhpsg-- 419 (626)
T KOG2106|consen 346 TTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--DHKLEWTKIIEDP--AECADFHPSG-- 419 (626)
T ss_pred eccceEEEeeecCCceEEEEecccceeeEEcCCChhheeeccCcceEEEcc--CCceeEEEEecCc--eeEeeccCcc--
Confidence 012235788899999999999999999999999999 4444444333322 5788899984
Q ss_pred EEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCC
Q psy14130 277 IVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSG 356 (494)
Q Consensus 277 l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~ 356 (494)
.++.| ...|...+.|.++ .....+. .+ ..++.++.|+|+|.+| +.|+.|+.|++|-+.............. +
T Consensus 420 ~va~G---t~~G~w~V~d~e~-~~lv~~~-~d-~~~ls~v~ysp~G~~l-Avgs~d~~iyiy~Vs~~g~~y~r~~k~~-g 491 (626)
T KOG2106|consen 420 VVAVG---TATGRWFVLDTET-QDLVTIH-TD-NEQLSVVRYSPDGAFL-AVGSHDNHIYIYRVSANGRKYSRVGKCS-G 491 (626)
T ss_pred eEEEe---eccceEEEEeccc-ceeEEEE-ec-CCceEEEEEcCCCCEE-EEecCCCeEEEEEECCCCcEEEEeeeec-C
Confidence 88888 6899999999987 3333332 23 6789999999999999 9999999999999987655445554444 4
Q ss_pred CCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 357 APQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 357 ~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
.+++.+.|++|+.++++. |-.+-+|+...
T Consensus 492 s~ithLDwS~Ds~~~~~~S~d~eiLyW~~~~ 522 (626)
T KOG2106|consen 492 SPITHLDWSSDSQFLVSNSGDYEILYWKPSE 522 (626)
T ss_pred ceeEEeeecCCCceEEeccCceEEEEEcccc
Confidence 899999999999999885 77788885444
|
|
| >KOG1063|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.8e-20 Score=178.17 Aligned_cols=161 Identities=12% Similarity=0.177 Sum_probs=127.3
Q ss_pred CCCCceEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEE
Q psy14130 217 CHPDVINCLSFNRDGSRLVTTCKD-----KTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVG 291 (494)
Q Consensus 217 ~h~~~v~~l~~~~~~~~l~s~~~d-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~ 291 (494)
||...|++++.+|+|+++||+++. ..|++|+..+...++.+.+|.-. +++++|+|++.+|++++ .|+++.
T Consensus 523 GHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLT-VT~l~FSpdg~~LLsvs----RDRt~s 597 (764)
T KOG1063|consen 523 GHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLT-VTRLAFSPDGRYLLSVS----RDRTVS 597 (764)
T ss_pred cCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccceE-EEEEEECCCCcEEEEee----cCceEE
Confidence 577889999999999999999975 45999999999988999999988 99999999988888887 999999
Q ss_pred EEeCCCCCCcee-Ee-eecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCC--CceEEecccccCCCCeeEEEEecC
Q psy14130 292 LWDENDLNTPLA-LE-TVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNE--RPYIHFLNQSLSGAPQRGLGFMPK 367 (494)
Q Consensus 292 iwd~~~~~~~~~-~~-~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~--~~~~~~~~~~~~~~~v~~~~~~p~ 367 (494)
+|.......... +. ...|..-|..+.|+|++.++ +|+|.|.+|++|..... +.+.++ ...+.+.+|+++++.|.
T Consensus 598 l~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~F-aTaSRDK~VkVW~~~~~~d~~i~~~-a~~~~~~aVTAv~~~~~ 675 (764)
T KOG1063|consen 598 LYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYF-ATASRDKKVKVWEEPDLRDKYISRF-ACLKFSLAVTAVAYLPV 675 (764)
T ss_pred eeeeecccchhhhhccccccceEEEEcccCccccee-EEecCCceEEEEeccCchhhhhhhh-chhccCCceeeEEeecc
Confidence 998754222111 11 23466778899999999996 99999999999999887 433332 33456788999999873
Q ss_pred -----Cceeeec--cceeEEEEee
Q psy14130 368 -----RGCDVTQ--CEIFRFFKLH 384 (494)
Q Consensus 368 -----~~~~~~~--~~~~~~~~l~ 384 (494)
+.+++.+ .+.+.+|+..
T Consensus 676 ~~~e~~~~vavGle~GeI~l~~~~ 699 (764)
T KOG1063|consen 676 DHNEKGDVVAVGLEKGEIVLWRRK 699 (764)
T ss_pred ccccccceEEEEecccEEEEEecc
Confidence 2244544 7888888855
|
|
| >KOG0308|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-21 Score=184.14 Aligned_cols=223 Identities=17% Similarity=0.305 Sum_probs=181.9
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC--eEEEEecCCCCceEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKG--EALTVIDCHPDVINCLS 226 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~--~~~~~~~~h~~~v~~l~ 226 (494)
+.|++|++......... ..+..++.|...|+.+....++ +.|+|+|.|-+|++|+...+ -++.++..|.+.|.+++
T Consensus 47 g~i~~W~~~~d~~~~s~-~~~asme~HsDWVNDiiL~~~~-~tlIS~SsDtTVK~W~~~~~~~~c~stir~H~DYVkcla 124 (735)
T KOG0308|consen 47 GIIRLWSVTQDSNEPST-PYIASMEHHSDWVNDIILCGNG-KTLISASSDTTVKVWNAHKDNTFCMSTIRTHKDYVKCLA 124 (735)
T ss_pred ceEEEeccccccCCccc-chhhhhhhhHhHHhhHHhhcCC-CceEEecCCceEEEeecccCcchhHhhhhcccchheeee
Confidence 47999998876432111 2467888999999999999888 68999999999999999877 57788889999999999
Q ss_pred E-cCCCCEEEEEeCCCeEEEEeCCCCc--eEEE--------ee-ecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEe
Q psy14130 227 F-NRDGSRLVTTCKDKTVRVLDPRTGL--VISQ--------GV-CHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWD 294 (494)
Q Consensus 227 ~-~~~~~~l~s~~~d~~v~iwd~~~~~--~~~~--------~~-~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd 294 (494)
+ -++..++|||+-|+.|.+||+.++. .+.. +. ++... +.+++.++. +.++++| +.++.+++||
T Consensus 125 ~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~s-iYSLA~N~t-~t~ivsG---gtek~lr~wD 199 (735)
T KOG0308|consen 125 YIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDS-IYSLAMNQT-GTIIVSG---GTEKDLRLWD 199 (735)
T ss_pred ecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccc-eeeeecCCc-ceEEEec---CcccceEEec
Confidence 9 7788899999999999999999873 2222 22 55555 788887777 5788888 7999999999
Q ss_pred CCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec
Q psy14130 295 ENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ 374 (494)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~ 374 (494)
.++..+...+. +|...|..+..++||..+ ++++.||+|++||+...+++..+.. |...|+++..+|.-..+.++
T Consensus 200 prt~~kimkLr--GHTdNVr~ll~~dDGt~~-ls~sSDgtIrlWdLgqQrCl~T~~v---H~e~VWaL~~~~sf~~vYsG 273 (735)
T KOG0308|consen 200 PRTCKKIMKLR--GHTDNVRVLLVNDDGTRL-LSASSDGTIRLWDLGQQRCLATYIV---HKEGVWALQSSPSFTHVYSG 273 (735)
T ss_pred cccccceeeee--ccccceEEEEEcCCCCeE-eecCCCceEEeeeccccceeeeEEe---ccCceEEEeeCCCcceEEec
Confidence 99877766655 577899999999999999 9999999999999999998766543 35569999999998888888
Q ss_pred cceeEEEEee
Q psy14130 375 CEIFRFFKLH 384 (494)
Q Consensus 375 ~~~~~~~~l~ 384 (494)
+....++...
T Consensus 274 ~rd~~i~~Td 283 (735)
T KOG0308|consen 274 GRDGNIYRTD 283 (735)
T ss_pred CCCCcEEecc
Confidence 6655555443
|
|
| >KOG1034|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.3e-20 Score=164.27 Aligned_cols=221 Identities=19% Similarity=0.332 Sum_probs=165.1
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEe---cCCCCceEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVI---DCHPDVINCL 225 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~---~~h~~~v~~l 225 (494)
+-|+|.|+.++ +....+.+|...|+.+.|+|...+++++||.|.+||+|++++..++..+ .+|.+.|.++
T Consensus 115 GvIrVid~~~~-------~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSv 187 (385)
T KOG1034|consen 115 GVIRVIDVVSG-------QCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSV 187 (385)
T ss_pred eEEEEEecchh-------hhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEE
Confidence 35999999988 7778899999999999999998899999999999999999999998887 4799999999
Q ss_pred EEcCCCCEEEEEeCCCeEEEEeCCCCceEEE----------------------------eeecCCCCceEEEEECCCCeE
Q psy14130 226 SFNRDGSRLVTTCKDKTVRVLDPRTGLVISQ----------------------------GVCHPGTRSSKAVFIGDTGRI 277 (494)
Q Consensus 226 ~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~----------------------------~~~~~~~~~~~~~~~~~~~~l 277 (494)
.|+++|.+|+|++.|-+|++|++...+.... -.-|... +-++.|.. +.+
T Consensus 188 D~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrny-VDCvrw~g--d~i 264 (385)
T KOG1034|consen 188 DFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNY-VDCVRWFG--DFI 264 (385)
T ss_pred EEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccch-HHHHHHHh--hhe
Confidence 9999999999999999999999974321100 0112222 33334443 244
Q ss_pred EEEEecCCCCceEEEEeCCCCCCc-----------eeEeeecCC-Cce--EEeEEeCCCCEEEEEEeCCCcEEEEEeeCC
Q psy14130 278 VTTGFSRHSDRQVGLWDENDLNTP-----------LALETVDSS-SGV--LFPYYDHDTRILFLAGKGDGNIRYYELTNE 343 (494)
Q Consensus 278 ~~~g~~~~~d~~i~iwd~~~~~~~-----------~~~~~~~~~-~~v--~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~ 343 (494)
++- +-++.|..|........ ..+..++-. ..+ ...+|+|-+++| +.|...|.|.+||++..
T Consensus 265 lSk----scenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~l-a~gnq~g~v~vwdL~~~ 339 (385)
T KOG1034|consen 265 LSK----SCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKML-ALGNQSGKVYVWDLDNN 339 (385)
T ss_pred eec----ccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHHH-hhccCCCcEEEEECCCC
Confidence 444 46889999987321111 111111111 223 345778888998 99999999999999987
Q ss_pred Cc-eEEecccccCCCCeeEEEEecCCceeeeccceeEEEEee
Q psy14130 344 RP-YIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLH 384 (494)
Q Consensus 344 ~~-~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~ 384 (494)
++ ....+.....+..|+..+|+.|+.+++.-++...+|+..
T Consensus 340 ep~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwd 381 (385)
T KOG1034|consen 340 EPPKCTTLTHSKSGSTVRQTSFSRDGSILVLVCDDGTVWRWD 381 (385)
T ss_pred CCccCceEEeccccceeeeeeecccCcEEEEEeCCCcEEEEE
Confidence 76 444455566678899999999999988876666676654
|
|
| >KOG2445|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.8e-19 Score=155.74 Aligned_cols=212 Identities=13% Similarity=0.177 Sum_probs=148.7
Q ss_pred cccccccEEEEEE-cCCCCCEEEEEeCCCeEEEEECCCC---------eEEEEecCCCCceEEEEEcC--CCCEEEEEeC
Q psy14130 172 LHGHKRRVGYIEW-HPTAENVVASAGFDYLIILWDVGKG---------EALTVIDCHPDVINCLSFNR--DGSRLVTTCK 239 (494)
Q Consensus 172 ~~~h~~~V~~~~~-~p~~~~~l~s~s~d~~v~iwd~~~~---------~~~~~~~~h~~~v~~l~~~~--~~~~l~s~~~ 239 (494)
.+.|.+.|..+.| +|.-++.+|+++.|+++.||.-... ....++......|++++|.| -|-.|++++.
T Consensus 55 Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~a 134 (361)
T KOG2445|consen 55 WRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASA 134 (361)
T ss_pred EEecCCcEEEEEecCccccceEEEEecCCceeeeeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEecc
Confidence 3458888888888 5655589999999999999985211 13455666788999999999 4779999999
Q ss_pred CCeEEEEeCCCC------ceEEEee-------ecCCCCceEEEEECC--CCeEEEEEecCC--CCceEEEEeCCCCC-Cc
Q psy14130 240 DKTVRVLDPRTG------LVISQGV-------CHPGTRSSKAVFIGD--TGRIVTTGFSRH--SDRQVGLWDENDLN-TP 301 (494)
Q Consensus 240 d~~v~iwd~~~~------~~~~~~~-------~~~~~~~~~~~~~~~--~~~l~~~g~~~~--~d~~i~iwd~~~~~-~~ 301 (494)
||.+|||+.-.. .+.+++. .+... ..++.|++. ...++++|+... .-+.++||...... +-
T Consensus 135 DG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~-~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw 213 (361)
T KOG2445|consen 135 DGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQP-CFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKW 213 (361)
T ss_pred CcEEEEEecCCccccccchhhhhhhhccCCcccccCc-ceEEeeccccccCceEEEEcccCCccccceEEEEecCCccee
Confidence 999999975432 2333333 22222 577888764 245888883110 01388999865433 22
Q ss_pred eeEee-ecCCCceEEeEEeCCC---CEEEEEEeCCCcEEEEEeeCCC----------------ceEEecccc-cCCCCee
Q psy14130 302 LALET-VDSSSGVLFPYYDHDT---RILFLAGKGDGNIRYYELTNER----------------PYIHFLNQS-LSGAPQR 360 (494)
Q Consensus 302 ~~~~~-~~~~~~v~~~~~~~~~---~~l~~~g~~dg~i~~wd~~~~~----------------~~~~~~~~~-~~~~~v~ 360 (494)
..... .++...|..++|.|+- -+++++++.|| |+||.+.... .....+..+ .|.++|+
T Consensus 214 ~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VW 292 (361)
T KOG2445|consen 214 LKVAELPDHTDPIRDISWAPNIGRSYHLLAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVW 292 (361)
T ss_pred eeehhcCCCCCcceeeeeccccCCceeeEEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceE
Confidence 22222 2677899999999964 34569999999 9999998421 112233322 3567899
Q ss_pred EEEEecCCceeeec--cceeEEEEeeC
Q psy14130 361 GLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 361 ~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
.+.|.=.|..+.+. ||.+|+|+.+-
T Consensus 293 rv~wNmtGtiLsStGdDG~VRLWkany 319 (361)
T KOG2445|consen 293 RVRWNMTGTILSSTGDDGCVRLWKANY 319 (361)
T ss_pred EEEEeeeeeEEeecCCCceeeehhhhh
Confidence 99999999988884 99999999876
|
|
| >KOG0270|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-20 Score=170.99 Aligned_cols=205 Identities=18% Similarity=0.240 Sum_probs=163.4
Q ss_pred CeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeE
Q psy14130 122 HFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLI 201 (494)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v 201 (494)
....+|..+..+..+++.+ .+|++||+.++ ++...+..|.+.|.+++|+|....+|++|+.|++|
T Consensus 247 l~Ls~n~~~~nVLaSgsaD--------~TV~lWD~~~g-------~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V 311 (463)
T KOG0270|consen 247 LALSWNRNFRNVLASGSAD--------KTVKLWDVDTG-------KPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTV 311 (463)
T ss_pred HHHHhccccceeEEecCCC--------ceEEEEEcCCC-------CcceehhhcCCceeEEEecCCCceEEEeccccceE
Confidence 3455566555555555554 47999999999 77888888999999999999988999999999999
Q ss_pred EEEECCCCeEE-EEecCCCCceEEEEEcCCC-CEEEEEeCCCeEEEEeCCCC-ceEEEeeecCCCCceEEEEECCCCeEE
Q psy14130 202 ILWDVGKGEAL-TVIDCHPDVINCLSFNRDG-SRLVTTCKDKTVRVLDPRTG-LVISQGVCHPGTRSSKAVFIGDTGRIV 278 (494)
Q Consensus 202 ~iwd~~~~~~~-~~~~~h~~~v~~l~~~~~~-~~l~s~~~d~~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~ 278 (494)
.+.|.+..... ..++ ..+.|-.++|+|.. ..++++..||+|+-+|+|+. +++.++.+|.+. +..+.++.....++
T Consensus 312 ~l~D~R~~~~s~~~wk-~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~-ISgl~~n~~~p~~l 389 (463)
T KOG0270|consen 312 ALKDCRDPSNSGKEWK-FDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDE-ISGLSVNIQTPGLL 389 (463)
T ss_pred EeeeccCccccCceEE-eccceEEEEecCCCceeEEEecCCceEEeeecCCCCCceeEEEeccCC-cceEEecCCCCcce
Confidence 99999843222 2222 45788999999954 46777889999999999987 799999999998 99999999888999
Q ss_pred EEEecCCCCceEEEEeCCCCCCceeEeeec-CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceE
Q psy14130 279 TTGFSRHSDRQVGLWDENDLNTPLALETVD-SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYI 347 (494)
Q Consensus 279 ~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~ 347 (494)
+++ +.|+.|++|++..... ....... ..+...|++++|+-..+++.|+..+.+++||+.+..++.
T Consensus 390 ~t~---s~d~~Vklw~~~~~~~-~~v~~~~~~~~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~~~~~V~ 455 (463)
T KOG0270|consen 390 STA---STDKVVKLWKFDVDSP-KSVKEHSFKLGRLHCFALDPDVAFTLAFGGEKAVLRVWDIFTNSPVR 455 (463)
T ss_pred eec---cccceEEEEeecCCCC-cccccccccccceeecccCCCcceEEEecCccceEEEeecccChhHH
Confidence 999 8999999999875333 2222111 123467789999999998999999999999999887643
|
|
| >KOG0267|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-22 Score=193.78 Aligned_cols=209 Identities=19% Similarity=0.292 Sum_probs=175.6
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcC
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNR 229 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~ 229 (494)
++-||.+... .++..+.+|..+|.|+.|++.. .+|++|+.+|+|++||++.++.++++.+|...+.++.|+|
T Consensus 51 k~~L~~i~kp-------~~i~S~~~hespIeSl~f~~~E-~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P 122 (825)
T KOG0267|consen 51 KVNLWAIGKP-------NAITSLTGHESPIESLTFDTSE-RLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHP 122 (825)
T ss_pred eeccccccCC-------chhheeeccCCcceeeecCcch-hhhcccccCCceeeeehhhhhhhhhhhccccCcceeeecc
Confidence 4668888766 5556789999999999999996 7999999999999999999999999999999999999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecC
Q psy14130 230 DGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDS 309 (494)
Q Consensus 230 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 309 (494)
-+.+.++|+.|..+++||.+...+...+.+|... +..+.|.|+ +++++.| ++|.+++|||+..++....+. .|
T Consensus 123 ~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~v-v~~l~lsP~-Gr~v~~g---~ed~tvki~d~~agk~~~ef~--~~ 195 (825)
T KOG0267|consen 123 YGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTRV-VDVLRLSPD-GRWVASG---GEDNTVKIWDLTAGKLSKEFK--SH 195 (825)
T ss_pred ceEEeccccccccceehhhhccCceeeecCCcce-eEEEeecCC-Cceeecc---CCcceeeeecccccccccccc--cc
Confidence 9999999999999999999988899999998876 777888888 7777777 689999999998765433332 25
Q ss_pred CCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccce
Q psy14130 310 SSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEI 377 (494)
Q Consensus 310 ~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~ 377 (494)
...+..+.|+|..-.+ ++|+.|+++++||+++-+.+... -.....|.+++|.|++..+.+++..
T Consensus 196 e~~v~sle~hp~e~Ll-a~Gs~d~tv~f~dletfe~I~s~---~~~~~~v~~~~fn~~~~~~~~G~q~ 259 (825)
T KOG0267|consen 196 EGKVQSLEFHPLEVLL-APGSSDRTVRFWDLETFEVISSG---KPETDGVRSLAFNPDGKIVLSGEQI 259 (825)
T ss_pred cccccccccCchhhhh-ccCCCCceeeeeccceeEEeecc---CCccCCceeeeecCCceeeecCchh
Confidence 6778888999887666 99999999999999974432111 1124679999999999999887544
|
|
| >KOG2106|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.1e-19 Score=161.54 Aligned_cols=226 Identities=13% Similarity=0.170 Sum_probs=168.8
Q ss_pred CcEEEEEEcCcEEEEEcCCCCCCCCcccceEecccc-cccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCC
Q psy14130 140 GGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGH-KRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCH 218 (494)
Q Consensus 140 ~g~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h-~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h 218 (494)
...++.++-+.+..|+.+.+.+.+ ....++.+ +..|.|++|.++|+ ++||..+|.|.||+..+.+..+....|
T Consensus 213 ~nliit~Gk~H~~Fw~~~~~~l~k----~~~~fek~ekk~Vl~v~F~engd--viTgDS~G~i~Iw~~~~~~~~k~~~aH 286 (626)
T KOG2106|consen 213 PNLIITCGKGHLYFWTLRGGSLVK----RQGIFEKREKKFVLCVTFLENGD--VITGDSGGNILIWSKGTNRISKQVHAH 286 (626)
T ss_pred CcEEEEeCCceEEEEEccCCceEE----EeeccccccceEEEEEEEcCCCC--EEeecCCceEEEEeCCCceEEeEeeec
Confidence 334444455679999998886643 22333333 36799999999984 889999999999999888877777799
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc-----------e-----------------------------EEEee
Q psy14130 219 PDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGL-----------V-----------------------------ISQGV 258 (494)
Q Consensus 219 ~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~-----------~-----------------------------~~~~~ 258 (494)
.+.|.+++...+|.+| ||++|++|..||-.-.+ . .....
T Consensus 287 ~ggv~~L~~lr~Gtll-SGgKDRki~~Wd~~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~ 365 (626)
T KOG2106|consen 287 DGGVFSLCMLRDGTLL-SGGKDRKIILWDDNYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQ 365 (626)
T ss_pred CCceEEEEEecCccEe-ecCccceEEeccccccccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEE
Confidence 9999999999999655 59999999999831100 0 01123
Q ss_pred ecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEE
Q psy14130 259 CHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYY 338 (494)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~w 338 (494)
+|... ...++.+|..+.++++| .|+.+++|+ . .++.-.. .-..++.++.|+|.| .+ +.|...|.-.+.
T Consensus 366 gh~de-lwgla~hps~~q~~T~g----qdk~v~lW~--~-~k~~wt~--~~~d~~~~~~fhpsg-~v-a~Gt~~G~w~V~ 433 (626)
T KOG2106|consen 366 GHGDE-LWGLATHPSKNQLLTCG----QDKHVRLWN--D-HKLEWTK--IIEDPAECADFHPSG-VV-AVGTATGRWFVL 433 (626)
T ss_pred ecccc-eeeEEcCCChhheeecc----CcceEEEcc--C-CceeEEE--EecCceeEeeccCcc-eE-EEeeccceEEEE
Confidence 45554 67788888877777777 899999999 2 2222112 234578899999999 66 899999999999
Q ss_pred EeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEeeCCCC
Q psy14130 339 ELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHTTRN 388 (494)
Q Consensus 339 d~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~~~~ 388 (494)
|.++... +..+..+.++..+.|+|+|.+++.+ |..+.+|.+..+..
T Consensus 434 d~e~~~l----v~~~~d~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~ 481 (626)
T KOG2106|consen 434 DTETQDL----VTIHTDNEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGR 481 (626)
T ss_pred eccccee----EEEEecCCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCc
Confidence 9988433 2333447899999999999999886 99999999988543
|
|
| >KOG1063|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.5e-20 Score=173.59 Aligned_cols=213 Identities=17% Similarity=0.264 Sum_probs=155.2
Q ss_pred cceEecccccccEEEEEEcCCC--CCEEEEEeCCCeEEEEECCCCe---------------------EE---E-------
Q psy14130 167 EWIMDLHGHKRRVGYIEWHPTA--ENVVASAGFDYLIILWDVGKGE---------------------AL---T------- 213 (494)
Q Consensus 167 ~~~~~~~~h~~~V~~~~~~p~~--~~~l~s~s~d~~v~iwd~~~~~---------------------~~---~------- 213 (494)
.....+.||.+.|.+++|...+ ..+|||+|.|..||||.+.-+. .. .
T Consensus 182 ~~v~el~GH~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~ea 261 (764)
T KOG1063|consen 182 ARVAELEGHTDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISFEA 261 (764)
T ss_pred eEEEEeeccchhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEehhh
Confidence 5667899999999999997654 3589999999999999874221 11 1
Q ss_pred EecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc-------eEEEeeecCCCCceEEEEECCCCeEEEEEecCCC
Q psy14130 214 VIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGL-------VISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHS 286 (494)
Q Consensus 214 ~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 286 (494)
.+.||++.|+++.|+|.+..|++++.|+++.+|...+.. .+....+..+. .....|+|+++.+++-| .
T Consensus 262 ll~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~G-F~g~lw~~n~~~ii~~g----~ 336 (764)
T KOG1063|consen 262 LLMGHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGG-FWGGLWSPNSNVIIAHG----R 336 (764)
T ss_pred hhcCcccceEEEEEccchhhheecccCcceEEEecCCccceEEEEEEeecccccccc-eeeEEEcCCCCEEEEec----c
Confidence 123899999999999999999999999999999887653 11222222333 78899999987788887 6
Q ss_pred CceEEEEeCCCCCC-ceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCC-ceEEecccccCCCCeeEEEE
Q psy14130 287 DRQVGLWDENDLNT-PLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNER-PYIHFLNQSLSGAPQRGLGF 364 (494)
Q Consensus 287 d~~i~iwd~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~-~~~~~~~~~~~~~~v~~~~~ 364 (494)
.|-.++|-..+... .......+|..+|..++|+|.|++| ++.+.|.+-|+|---..+ ....+.....|+...++++|
T Consensus 337 ~Gg~hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGefl-Lsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~ 415 (764)
T KOG1063|consen 337 TGGFHLWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFL-LSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSF 415 (764)
T ss_pred cCcEEEEeccCccceeeccccccccccceeeeecCCCCEE-EEeccccceeeecccccccceeeecccccccccceeeeh
Confidence 88899998333221 1112223566899999999999999 888899999998655222 22233333446778999999
Q ss_pred ecCCceeeec-c-ceeEEEEeeC
Q psy14130 365 MPKRGCDVTQ-C-EIFRFFKLHT 385 (494)
Q Consensus 365 ~p~~~~~~~~-~-~~~~~~~l~~ 385 (494)
.+....++++ + ..+|+|+...
T Consensus 416 vn~~~~FVSgAdEKVlRvF~aPk 438 (764)
T KOG1063|consen 416 VNEDLQFVSGADEKVLRVFEAPK 438 (764)
T ss_pred ccCCceeeecccceeeeeecCcH
Confidence 9955666664 4 4678887644
|
|
| >KOG0301|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.1e-20 Score=177.75 Aligned_cols=167 Identities=23% Similarity=0.417 Sum_probs=140.7
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcC
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNR 229 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~ 229 (494)
++++|.+. +....+++|+..|.+++.-|++ .++|||.|.+|++|.- ++.+++|.+|.+.|+++++-+
T Consensus 123 TakvW~~~---------~l~~~l~gH~asVWAv~~l~e~--~~vTgsaDKtIklWk~--~~~l~tf~gHtD~VRgL~vl~ 189 (745)
T KOG0301|consen 123 TAKVWRIG---------ELVYSLQGHTASVWAVASLPEN--TYVTGSADKTIKLWKG--GTLLKTFSGHTDCVRGLAVLD 189 (745)
T ss_pred ceEEecch---------hhhcccCCcchheeeeeecCCC--cEEeccCcceeeeccC--CchhhhhccchhheeeeEEec
Confidence 69999876 3445689999999999999985 8999999999999985 788999999999999999997
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecC
Q psy14130 230 DGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDS 309 (494)
Q Consensus 230 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 309 (494)
++ .++|++.||.|++|++ +|+++.++.+|+.. +.++....+++.++++| +|++++||+... ..+.+.+
T Consensus 190 ~~-~flScsNDg~Ir~w~~-~ge~l~~~~ghtn~-vYsis~~~~~~~Ivs~g----EDrtlriW~~~e-----~~q~I~l 257 (745)
T KOG0301|consen 190 DS-HFLSCSNDGSIRLWDL-DGEVLLEMHGHTNF-VYSISMALSDGLIVSTG----EDRTLRIWKKDE-----CVQVITL 257 (745)
T ss_pred CC-CeEeecCCceEEEEec-cCceeeeeeccceE-EEEEEecCCCCeEEEec----CCceEEEeecCc-----eEEEEec
Confidence 65 5889999999999999 78999999999998 88888777767788887 999999999762 1222333
Q ss_pred C-CceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCC
Q psy14130 310 S-SGVLFPYYDHDTRILFLAGKGDGNIRYYELTNE 343 (494)
Q Consensus 310 ~-~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~ 343 (494)
. ..+.++.+-++|..+ +|+.||.||||.....
T Consensus 258 PttsiWsa~~L~NgDIv--vg~SDG~VrVfT~~k~ 290 (745)
T KOG0301|consen 258 PTTSIWSAKVLLNGDIV--VGGSDGRVRVFTVDKD 290 (745)
T ss_pred CccceEEEEEeeCCCEE--EeccCceEEEEEeccc
Confidence 3 478888888888764 7889999999998743
|
|
| >KOG1408|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.2e-19 Score=170.04 Aligned_cols=250 Identities=15% Similarity=0.134 Sum_probs=188.4
Q ss_pred CceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCC----------CCEEEEEeC
Q psy14130 128 PKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTA----------ENVVASAGF 197 (494)
Q Consensus 128 ~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~----------~~~l~s~s~ 197 (494)
|+.+|+...-..+-..++..+..+.|||+.+-.... + ...+--|...|+.+.--|.. +..++||+.
T Consensus 325 PD~IA~~Fdet~~klscVYndhSlYvWDvrD~~kvg---k-~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSs 400 (1080)
T KOG1408|consen 325 PDAIACQFDETTDKLSCVYNDHSLYVWDVRDVNKVG---K-CSSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSS 400 (1080)
T ss_pred CceeEEEecCCCceEEEEEcCceEEEEecccccccc---c-eeeeeeccceeeeeccccccccCcccccCCccceeEecC
Confidence 566677766666777788888999999998764332 2 22334488888888765411 125899999
Q ss_pred CCeEEEEECCCCeEEEE-----e--------------------------------cCCCCceEEEEEcCCCCEEEEEeCC
Q psy14130 198 DYLIILWDVGKGEALTV-----I--------------------------------DCHPDVINCLSFNRDGSRLVTTCKD 240 (494)
Q Consensus 198 d~~v~iwd~~~~~~~~~-----~--------------------------------~~h~~~v~~l~~~~~~~~l~s~~~d 240 (494)
|++||+||+..+..-.. + -.....+.+++.+|+|++|++|..-
T Consensus 401 D~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~ 480 (1080)
T KOG1408|consen 401 DGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQHLASGDRG 480 (1080)
T ss_pred CCcEEEeecccccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCcceecccCcc
Confidence 99999999965211000 0 0123468999999999999999999
Q ss_pred CeEEEEeCCCCceEEEeeecCCCCceEEEEECC--CCeEEEEEecCCCCceEEEEeCCCCCCceeE--------------
Q psy14130 241 KTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGD--TGRIVTTGFSRHSDRQVGLWDENDLNTPLAL-------------- 304 (494)
Q Consensus 241 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~-------------- 304 (494)
|++|+||+..-+....+.+|... +.++.|+.. +..||+++ +.|+.|+|||+...-.+...
T Consensus 481 GnlrVy~Lq~l~~~~~~eAHesE-ilcLeyS~p~~~~kLLASa---srdRlIHV~Dv~rny~l~qtld~HSssITsvKFa 556 (1080)
T KOG1408|consen 481 GNLRVYDLQELEYTCFMEAHESE-ILCLEYSFPVLTNKLLASA---SRDRLIHVYDVKRNYDLVQTLDGHSSSITSVKFA 556 (1080)
T ss_pred CceEEEEehhhhhhhheecccce-eEEEeecCchhhhHhhhhc---cCCceEEEEecccccchhhhhcccccceeEEEEe
Confidence 99999999999988899999988 889988754 45789998 89999999997531111100
Q ss_pred ------e----------------------------eecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEec
Q psy14130 305 ------E----------------------------TVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFL 350 (494)
Q Consensus 305 ------~----------------------------~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~ 350 (494)
. ..-....+..++.+|..+++ ++++.|..|+|||+++++....+-
T Consensus 557 ~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v-~t~cQDrnirif~i~sgKq~k~FK 635 (1080)
T KOG1408|consen 557 CNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLV-VTVCQDRNIRIFDIESGKQVKSFK 635 (1080)
T ss_pred ecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceE-EEEecccceEEEeccccceeeeec
Confidence 0 00011335678888888888 899999999999999999877777
Q ss_pred ccccCCCCeeEEEEecCCceeeec--cceeEEEEeeCC
Q psy14130 351 NQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHTT 386 (494)
Q Consensus 351 ~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~~ 386 (494)
....+.+....+...|.|.+++++ |.++.++++..+
T Consensus 636 gs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sg 673 (1080)
T KOG1408|consen 636 GSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSG 673 (1080)
T ss_pred ccccCCCceEEEEECCCccEEEEeecCCceEEEEeccc
Confidence 777777778889999999999986 889999998763
|
|
| >KOG0267|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.1e-22 Score=190.81 Aligned_cols=168 Identities=23% Similarity=0.420 Sum_probs=149.4
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcC
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNR 229 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~ 229 (494)
.|++||+.+. +.+++|.||...+.++.|+|-+ .+.|+|+.|..+++||++...+...+.+|...|..+.|+|
T Consensus 93 tiK~wDleeA-------k~vrtLtgh~~~~~sv~f~P~~-~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP 164 (825)
T KOG0267|consen 93 TIKVWDLEEA-------KIVRTLTGHLLNITSVDFHPYG-EFFASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDVLRLSP 164 (825)
T ss_pred ceeeeehhhh-------hhhhhhhccccCcceeeeccce-EEeccccccccceehhhhccCceeeecCCcceeEEEeecC
Confidence 7999999988 6778999999999999999999 5889999999999999998889999999999999999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecC
Q psy14130 230 DGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDS 309 (494)
Q Consensus 230 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 309 (494)
+|+++++++.|.+++|||...|+...+|..|.+. +..+.|+|. +.+++.| +.|+++++||+++........ ..
T Consensus 165 ~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e~~-v~sle~hp~-e~Lla~G---s~d~tv~f~dletfe~I~s~~--~~ 237 (825)
T KOG0267|consen 165 DGRWVASGGEDNTVKIWDLTAGKLSKEFKSHEGK-VQSLEFHPL-EVLLAPG---SSDRTVRFWDLETFEVISSGK--PE 237 (825)
T ss_pred CCceeeccCCcceeeeeccccccccccccccccc-ccccccCch-hhhhccC---CCCceeeeeccceeEEeeccC--Cc
Confidence 9999999999999999999999999999999988 888888887 8899999 899999999998754322221 23
Q ss_pred CCceEEeEEeCCCCEEEEEEeCCC
Q psy14130 310 SSGVLFPYYDHDTRILFLAGKGDG 333 (494)
Q Consensus 310 ~~~v~~~~~~~~~~~l~~~g~~dg 333 (494)
..+|.+..|+|++..+ .+|..+.
T Consensus 238 ~~~v~~~~fn~~~~~~-~~G~q~s 260 (825)
T KOG0267|consen 238 TDGVRSLAFNPDGKIV-LSGEQIS 260 (825)
T ss_pred cCCceeeeecCCceee-ecCchhh
Confidence 4789999999999988 7775543
|
|
| >KOG1036|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.1e-20 Score=158.90 Aligned_cols=216 Identities=17% Similarity=0.256 Sum_probs=164.7
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcC
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNR 229 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~ 229 (494)
.+++|+++... ....++ |..++.+++|.++ ..+++|+.||.|+.+|+.++... .+..|..+|.+|.+++
T Consensus 36 slrlYdv~~~~-------l~~~~~-~~~plL~c~F~d~--~~~~~G~~dg~vr~~Dln~~~~~-~igth~~~i~ci~~~~ 104 (323)
T KOG1036|consen 36 SLRLYDVPANS-------LKLKFK-HGAPLLDCAFADE--STIVTGGLDGQVRRYDLNTGNED-QIGTHDEGIRCIEYSY 104 (323)
T ss_pred cEEEEeccchh-------hhhhee-cCCceeeeeccCC--ceEEEeccCceEEEEEecCCcce-eeccCCCceEEEEeec
Confidence 69999998873 223333 9999999999986 58999999999999999887654 4556999999999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecC
Q psy14130 230 DGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDS 309 (494)
Q Consensus 230 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 309 (494)
....+++|+.|++|++||.+.......+.... ++.++... +..|.+| +.++.+.+||+|+...+.+.....-
T Consensus 105 ~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~~k--kVy~~~v~---g~~LvVg---~~~r~v~iyDLRn~~~~~q~reS~l 176 (323)
T KOG1036|consen 105 EVGCVISGSWDKTIKFWDPRNKVVVGTFDQGK--KVYCMDVS---GNRLVVG---TSDRKVLIYDLRNLDEPFQRRESSL 176 (323)
T ss_pred cCCeEEEcccCccEEEEeccccccccccccCc--eEEEEecc---CCEEEEe---ecCceEEEEEcccccchhhhccccc
Confidence 88899999999999999999754444443322 35555443 3344444 4899999999999888776555445
Q ss_pred CCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCC----ceEEec------ccccCCCCeeEEEEecCCceeeec--cce
Q psy14130 310 SSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNER----PYIHFL------NQSLSGAPQRGLGFMPKRGCDVTQ--CEI 377 (494)
Q Consensus 310 ~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~----~~~~~~------~~~~~~~~v~~~~~~p~~~~~~~~--~~~ 377 (494)
...++++++-|++.-. ++++-||.|.+=.+...+ ....+- ....-..||.+++|+|-...++++ |+.
T Consensus 177 kyqtR~v~~~pn~eGy-~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~tfaTgGsDG~ 255 (323)
T KOG1036|consen 177 KYQTRCVALVPNGEGY-VVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGTFATGGSDGI 255 (323)
T ss_pred eeEEEEEEEecCCCce-EEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEeccccceEEecCCCce
Confidence 5678999999987777 889999998876665541 111111 111123689999999998889886 999
Q ss_pred eEEEEeeC
Q psy14130 378 FRFFKLHT 385 (494)
Q Consensus 378 ~~~~~l~~ 385 (494)
+.+|++..
T Consensus 256 V~~Wd~~~ 263 (323)
T KOG1036|consen 256 VNIWDLFN 263 (323)
T ss_pred EEEccCcc
Confidence 99999987
|
|
| >KOG4283|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.8e-20 Score=159.76 Aligned_cols=215 Identities=17% Similarity=0.202 Sum_probs=168.8
Q ss_pred ccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeE----------EE-----EecCCCCceEEEEEcC-CCCEEEE
Q psy14130 173 HGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEA----------LT-----VIDCHPDVINCLSFNR-DGSRLVT 236 (494)
Q Consensus 173 ~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~----------~~-----~~~~h~~~v~~l~~~~-~~~~l~s 236 (494)
..|.+.|+++...+...+++++|+.||.|.+||++.... +. .-.+|...|.++.|-| |.-++.+
T Consensus 40 r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFts 119 (397)
T KOG4283|consen 40 RPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTS 119 (397)
T ss_pred ccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeec
Confidence 459999999999998778999999999999999975431 11 1136888999999999 6668899
Q ss_pred EeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECC--CCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceE
Q psy14130 237 TCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGD--TGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVL 314 (494)
Q Consensus 237 ~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~ 314 (494)
++-|.++++||..+-+....+..... +.+-+++|- ...|+++| ..+-+|++.|+.++.....+. +|..+|.
T Consensus 120 sSFDhtlKVWDtnTlQ~a~~F~me~~--VYshamSp~a~sHcLiA~g---tr~~~VrLCDi~SGs~sH~Ls--GHr~~vl 192 (397)
T KOG4283|consen 120 SSFDHTLKVWDTNTLQEAVDFKMEGK--VYSHAMSPMAMSHCLIAAG---TRDVQVRLCDIASGSFSHTLS--GHRDGVL 192 (397)
T ss_pred ccccceEEEeecccceeeEEeecCce--eehhhcChhhhcceEEEEe---cCCCcEEEEeccCCcceeeec--cccCceE
Confidence 99999999999999887766654432 566666664 24689999 789999999999876644443 4778999
Q ss_pred EeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecc------------cccCCCCeeEEEEecCCceeee--ccceeEE
Q psy14130 315 FPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLN------------QSLSGAPQRGLGFMPKRGCDVT--QCEIFRF 380 (494)
Q Consensus 315 ~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~------------~~~~~~~v~~~~~~p~~~~~~~--~~~~~~~ 380 (494)
++.|+|..++++++|+.||.|++||++.....+..+. ...+.+.+.++||+.++..+++ .|..+|+
T Consensus 193 aV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~ 272 (397)
T KOG4283|consen 193 AVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRV 272 (397)
T ss_pred EEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccceEE
Confidence 9999999999999999999999999986522122222 2234577999999999988776 4999999
Q ss_pred EEeeCCCCeEEEeE
Q psy14130 381 FKLHTTRNMCEPIS 394 (494)
Q Consensus 381 ~~l~~~~~~~~~~~ 394 (494)
|+...+++...|..
T Consensus 273 wn~~~G~ntl~~~g 286 (397)
T KOG4283|consen 273 WNMESGRNTLREFG 286 (397)
T ss_pred eecccCcccccccc
Confidence 99988766655443
|
|
| >KOG0646|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.4e-20 Score=167.48 Aligned_cols=210 Identities=17% Similarity=0.266 Sum_probs=166.9
Q ss_pred CCcEEEEEE--cCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECC---------
Q psy14130 139 GGGAFLVLP--IHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVG--------- 207 (494)
Q Consensus 139 ~~g~~~~~~--~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~--------- 207 (494)
..|.+++.+ .+++.+|.+.+| ..+..+.+|-..|+|+.|+-+| .+|+|||.||.|.+|++.
T Consensus 91 n~G~~l~ag~i~g~lYlWelssG-------~LL~v~~aHYQ~ITcL~fs~dg-s~iiTgskDg~V~vW~l~~lv~a~~~~ 162 (476)
T KOG0646|consen 91 NLGYFLLAGTISGNLYLWELSSG-------ILLNVLSAHYQSITCLKFSDDG-SHIITGSKDGAVLVWLLTDLVSADNDH 162 (476)
T ss_pred CCceEEEeecccCcEEEEEeccc-------cHHHHHHhhccceeEEEEeCCC-cEEEecCCCccEEEEEEEeecccccCC
Confidence 344444443 457999999999 5666778999999999999998 699999999999999873
Q ss_pred CCeEEEEecCCCCceEEEEEcCC--CCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCC
Q psy14130 208 KGEALTVIDCHPDVINCLSFNRD--GSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRH 285 (494)
Q Consensus 208 ~~~~~~~~~~h~~~v~~l~~~~~--~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~ 285 (494)
+-+++..+..|.-+|+++...+. ..+|+|+|.|.++++||+..|.++.++..... +.+++..|. ++.+.+| .
T Consensus 163 ~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~fp~s--i~av~lDpa-e~~~yiG---t 236 (476)
T KOG0646|consen 163 SVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTITFPSS--IKAVALDPA-ERVVYIG---T 236 (476)
T ss_pred CccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEecCCc--ceeEEEccc-ccEEEec---C
Confidence 23578889999999999998875 45899999999999999999998888775543 688888887 6677777 7
Q ss_pred CCceEEEEeCCCCCC--c-----------eeE-eeecCCC--ceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEe
Q psy14130 286 SDRQVGLWDENDLNT--P-----------LAL-ETVDSSS--GVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHF 349 (494)
Q Consensus 286 ~d~~i~iwd~~~~~~--~-----------~~~-~~~~~~~--~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~ 349 (494)
++|.|.+.++.+... . ... ...+|.+ .|+|++++-||..| ++|+.||.+++||+.+.+.+...
T Consensus 237 ~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlL-lSGd~dg~VcvWdi~S~Q~iRtl 315 (476)
T KOG0646|consen 237 EEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLL-LSGDEDGKVCVWDIYSKQCIRTL 315 (476)
T ss_pred CcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCccEE-EeeCCCCCEEEEecchHHHHHHH
Confidence 999999998764330 0 011 1123444 89999999999999 99999999999999998875444
Q ss_pred cccccCCCCeeEEEEec
Q psy14130 350 LNQSLSGAPQRGLGFMP 366 (494)
Q Consensus 350 ~~~~~~~~~v~~~~~~p 366 (494)
.. ..++|+.+.+.|
T Consensus 316 ~~---~kgpVtnL~i~~ 329 (476)
T KOG0646|consen 316 QT---SKGPVTNLQINP 329 (476)
T ss_pred hh---hccccceeEeec
Confidence 32 357899998865
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.2e-18 Score=164.39 Aligned_cols=198 Identities=13% Similarity=0.085 Sum_probs=142.1
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCC-eEEEEECCCCeEEEEecCCCCceEEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDY-LIILWDVGKGEALTVIDCHPDVINCLSF 227 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~-~v~iwd~~~~~~~~~~~~h~~~v~~l~~ 227 (494)
+.|++||+.+. ..+..+. +...+.+++|+|++ .++++++.++ .+.+||..+++....+. ....+.+++|
T Consensus 95 ~~l~~~d~~~~-------~~~~~~~-~~~~~~~~~~~~dg-~~l~~~~~~~~~~~~~d~~~~~~~~~~~-~~~~~~~~~~ 164 (300)
T TIGR03866 95 NLVTVIDIETR-------KVLAEIP-VGVEPEGMAVSPDG-KIVVNTSETTNMAHFIDTKTYEIVDNVL-VDQRPRFAEF 164 (300)
T ss_pred CeEEEEECCCC-------eEEeEee-CCCCcceEEECCCC-CEEEEEecCCCeEEEEeCCCCeEEEEEE-cCCCccEEEE
Confidence 46999999876 3334443 23346889999998 6888877765 57788998887766554 3345678999
Q ss_pred cCCCCEEEEE-eCCCeEEEEeCCCCceEEEeeecCC------CCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCC
Q psy14130 228 NRDGSRLVTT-CKDKTVRVLDPRTGLVISQGVCHPG------TRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNT 300 (494)
Q Consensus 228 ~~~~~~l~s~-~~d~~v~iwd~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~ 300 (494)
+|+|++|+.+ ..++.|++||+++++.+..+..+.. .....+.|++++..++++. ..++.|.+||+++.+.
T Consensus 165 s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~---~~~~~i~v~d~~~~~~ 241 (300)
T TIGR03866 165 TADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVAL---GPANRVAVVDAKTYEV 241 (300)
T ss_pred CCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEc---CCCCeEEEEECCCCcE
Confidence 9999988654 4699999999999987776653321 1134678899877766654 4677899999986543
Q ss_pred ceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEec
Q psy14130 301 PLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMP 366 (494)
Q Consensus 301 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p 366 (494)
. . .......+.+++|+|+++.|++++..+|.|++||+++++.+..+. .+...++++++|
T Consensus 242 ~-~--~~~~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~----~~~~~~~~~~~~ 300 (300)
T TIGR03866 242 L-D--YLLVGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVIKSIK----VGRLPWGVVVRP 300 (300)
T ss_pred E-E--EEEeCCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEE----cccccceeEeCC
Confidence 2 1 122345688999999999996666679999999999988754442 234568888875
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >KOG0303|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.3e-19 Score=161.63 Aligned_cols=265 Identities=23% Similarity=0.374 Sum_probs=183.5
Q ss_pred cEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEEeccccccccCCCCceeecccCCcccee
Q psy14130 30 TFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRFRGVRSSKFRHVYGVHSKRDGCY 109 (494)
Q Consensus 30 ~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (494)
..|+++....+++.|+++++++...|++.||+.|+.|++++|..++||.|+++|++....+.. .+..+.++.
T Consensus 10 KfRHVFgq~~K~e~CYddIrVs~~tWDS~fcavNPkfiAvi~easgGgaf~ViPl~k~Gr~d~-~~P~v~GHt------- 81 (472)
T KOG0303|consen 10 KFRHVFGQPVKNDQCYDDIRVSRVTWDSSFCAVNPKFVAVIIEASGGGAFLVIPLVKTGRMDA-SYPLVCGHT------- 81 (472)
T ss_pred hhHHHhccccchhhhhcceeeeeeeccccccccCCceEEEEEecCCCcceeecccccccccCC-CCCCccCcc-------
Confidence 456788888999999999999999999999999999999999999999999999987543322 222222221
Q ss_pred eceeccCCccCCCeeeeCCceEEEE--------EeecCCc------------------------------E-EEEEEcCc
Q psy14130 110 DNVPITRNAHDSHFCAANPKFVAVV--------TEVAGGG------------------------------A-FLVLPIHR 150 (494)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~g------------------------------~-~~~~~~~~ 150 (494)
....|..+|++|...+|.. |....+| . +....+++
T Consensus 82 ------~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~ 155 (472)
T KOG0303|consen 82 ------APVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNT 155 (472)
T ss_pred ------ccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCce
Confidence 1123334444443333221 1111111 0 00111234
Q ss_pred EEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCc-eEEEEEcC
Q psy14130 151 VKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDV-INCLSFNR 229 (494)
Q Consensus 151 v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~-v~~l~~~~ 229 (494)
|.||++.++ +.+.++. |...|.++.|+.+| .+|+|++.|..|||||.++++.+..-.+|.+. -..+.|..
T Consensus 156 v~iWnv~tg-------eali~l~-hpd~i~S~sfn~dG-s~l~TtckDKkvRv~dpr~~~~v~e~~~heG~k~~Raifl~ 226 (472)
T KOG0303|consen 156 VSIWNVGTG-------EALITLD-HPDMVYSMSFNRDG-SLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGAKPARAIFLA 226 (472)
T ss_pred EEEEeccCC-------ceeeecC-CCCeEEEEEeccCC-ceeeeecccceeEEEcCCCCcEeeecccccCCCcceeEEec
Confidence 999999999 6666777 99999999999999 79999999999999999999998888778653 44567888
Q ss_pred CCCEEEEEe---CCCeEEEEeCCCCc---eEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCcee
Q psy14130 230 DGSRLVTTC---KDKTVRVLDPRTGL---VISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLA 303 (494)
Q Consensus 230 ~~~~l~s~~---~d~~v~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~ 303 (494)
+|..+-||- .++.+-+||..+-+ ...++....+ +.--.|.++.+.++.+| -.|+.||-|.+.+...-+.
T Consensus 227 ~g~i~tTGfsr~seRq~aLwdp~nl~eP~~~~elDtSnG--vl~PFyD~dt~ivYl~G---KGD~~IRYyEit~d~P~~h 301 (472)
T KOG0303|consen 227 SGKIFTTGFSRMSERQIALWDPNNLEEPIALQELDTSNG--VLLPFYDPDTSIVYLCG---KGDSSIRYFEITNEPPFVH 301 (472)
T ss_pred cCceeeeccccccccceeccCcccccCcceeEEeccCCc--eEEeeecCCCCEEEEEe---cCCcceEEEEecCCCceeE
Confidence 888444443 47889999987654 3334433332 45555777878888888 7899999999987432222
Q ss_pred E-eeecCCCceEEeEEeCCC
Q psy14130 304 L-ETVDSSSGVLFPYYDHDT 322 (494)
Q Consensus 304 ~-~~~~~~~~v~~~~~~~~~ 322 (494)
. ..+....+-..+.|-|..
T Consensus 302 yln~f~S~epQRG~g~mPKR 321 (472)
T KOG0303|consen 302 YLNTFSSKEPQRGMGFMPKR 321 (472)
T ss_pred EecccccCCccccccccccc
Confidence 1 222233444556666654
|
|
| >KOG2919|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.1e-19 Score=154.53 Aligned_cols=220 Identities=17% Similarity=0.288 Sum_probs=161.1
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccE---EEEEEcCCCCCEEEEEeCCCeEEEEEC-CCCeE--EEE-ec----CC
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRV---GYIEWHPTAENVVASAGFDYLIILWDV-GKGEA--LTV-ID----CH 218 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V---~~~~~~p~~~~~l~s~s~d~~v~iwd~-~~~~~--~~~-~~----~h 218 (494)
-|++||.-++++...+ ....|...+ .+++|+|+|+ .|++| ...+|+++|+ +.|.. +.. +. +.
T Consensus 134 PIh~wdaftG~lraSy-----~~ydh~de~taAhsL~Fs~DGe-qlfaG-ykrcirvFdt~RpGr~c~vy~t~~~~k~gq 206 (406)
T KOG2919|consen 134 PIHLWDAFTGKLRASY-----RAYDHQDEYTAAHSLQFSPDGE-QLFAG-YKRCIRVFDTSRPGRDCPVYTTVTKGKFGQ 206 (406)
T ss_pred ceeeeeccccccccch-----hhhhhHHhhhhheeEEecCCCC-eEeec-ccceEEEeeccCCCCCCcchhhhhcccccc
Confidence 5999999999764322 223354443 5899999995 66655 5789999999 45542 221 11 23
Q ss_pred CCceEEEEEcCC-CCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCC
Q psy14130 219 PDVINCLSFNRD-GSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEND 297 (494)
Q Consensus 219 ~~~v~~l~~~~~-~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~ 297 (494)
.+.|.+++|+|- ...++.++...++-||.-..+.++..+-+|.+. |+.+.|.++++++++.+ ..+-.|..||+|.
T Consensus 207 ~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gG-vThL~~~edGn~lfsGa---Rk~dkIl~WDiR~ 282 (406)
T KOG2919|consen 207 KGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGG-VTHLQWCEDGNKLFSGA---RKDDKILCWDIRY 282 (406)
T ss_pred cceeeeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCC-eeeEEeccCcCeecccc---cCCCeEEEEeehh
Confidence 678899999994 559999999999999998888899999999998 99999999999888888 7889999999997
Q ss_pred CCCceeE-ee-ecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeC-CCceEEecccccCCCCeeEEEEecCCceeeec
Q psy14130 298 LNTPLAL-ET-VDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTN-ERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ 374 (494)
Q Consensus 298 ~~~~~~~-~~-~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~-~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~ 374 (494)
...++-. .. .+..+.-.-....|++++| ++|+.||.|++||+.. +.+...+ ......+.+++++|--.++++.
T Consensus 283 ~~~pv~~L~rhv~~TNQRI~FDld~~~~~L-asG~tdG~V~vwdlk~~gn~~sv~---~~~sd~vNgvslnP~mpilats 358 (406)
T KOG2919|consen 283 SRDPVYALERHVGDTNQRILFDLDPKGEIL-ASGDTDGSVRVWDLKDLGNEVSVT---GNYSDTVNGVSLNPIMPILATS 358 (406)
T ss_pred ccchhhhhhhhccCccceEEEecCCCCcee-eccCCCccEEEEecCCCCCccccc---ccccccccceecCcccceeeec
Confidence 6554321 11 1112333446678999999 9999999999999998 5532222 2235679999999996666665
Q ss_pred cceeEEEEeeC
Q psy14130 375 CEIFRFFKLHT 385 (494)
Q Consensus 375 ~~~~~~~~l~~ 385 (494)
.+. |+|....
T Consensus 359 sGq-r~f~~~~ 368 (406)
T KOG2919|consen 359 SGQ-RIFKYPK 368 (406)
T ss_pred cCc-eeecCCC
Confidence 443 5554433
|
|
| >KOG0646|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.3e-20 Score=166.64 Aligned_cols=219 Identities=18% Similarity=0.199 Sum_probs=173.4
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcC
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNR 229 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~ 229 (494)
.+.+|.+..... .+...--.++|.+++-+|+| .+|+.|+..|.|++|.+.+|..+..+.+|-..|+++.|+.
T Consensus 62 ~l~vw~i~k~~~-------~~q~~v~Pg~v~al~s~n~G-~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~ 133 (476)
T KOG0646|consen 62 LLHVWEILKKDQ-------VVQYIVLPGPVHALASSNLG-YFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSD 133 (476)
T ss_pred cccccccCchhh-------hhhhcccccceeeeecCCCc-eEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeC
Confidence 488999876522 11111235679999999998 7888888999999999999999999999999999999999
Q ss_pred CCCEEEEEeCCCeEEEEeCC---------CCceEEEeeecCCCCceEEEEECC--CCeEEEEEecCCCCceEEEEeCCCC
Q psy14130 230 DGSRLVTTCKDKTVRVLDPR---------TGLVISQGVCHPGTRSSKAVFIGD--TGRIVTTGFSRHSDRQVGLWDENDL 298 (494)
Q Consensus 230 ~~~~l~s~~~d~~v~iwd~~---------~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~g~~~~~d~~i~iwd~~~~ 298 (494)
||.+|+||+.||.|.+|++. +-++++.+..|.-+ ++.+...+. +.++++++ .|+++++||+..+
T Consensus 134 dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~Htls-ITDl~ig~Gg~~~rl~TaS----~D~t~k~wdlS~g 208 (476)
T KOG0646|consen 134 DGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLS-ITDLQIGSGGTNARLYTAS----EDRTIKLWDLSLG 208 (476)
T ss_pred CCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcce-eEEEEecCCCccceEEEec----CCceEEEEEeccc
Confidence 99999999999999999763 34578888899887 777765443 35677766 9999999999876
Q ss_pred CCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCce---------------EEecccccCCCCeeEEE
Q psy14130 299 NTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPY---------------IHFLNQSLSGAPQRGLG 363 (494)
Q Consensus 299 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~---------------~~~~~~~~~~~~v~~~~ 363 (494)
..... +.....+.+++.+|-++.+ .+|+.+|.|.+.++...... ...+..+....+|++++
T Consensus 209 ~LLlt---i~fp~si~av~lDpae~~~-yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLa 284 (476)
T KOG0646|consen 209 VLLLT---ITFPSSIKAVALDPAERVV-YIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLA 284 (476)
T ss_pred eeeEE---EecCCcceeEEEcccccEE-EecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEE
Confidence 44332 3345678999999999998 67899999999888654311 11122333345899999
Q ss_pred EecCCceeeec--cceeEEEEeeC
Q psy14130 364 FMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 364 ~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
.+-||.+++++ |+.+.+|++..
T Consensus 285 is~DgtlLlSGd~dg~VcvWdi~S 308 (476)
T KOG0646|consen 285 ISTDGTLLLSGDEDGKVCVWDIYS 308 (476)
T ss_pred EecCccEEEeeCCCCCEEEEecch
Confidence 99999999997 88999999876
|
|
| >KOG1273|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.2e-19 Score=155.69 Aligned_cols=241 Identities=15% Similarity=0.171 Sum_probs=176.1
Q ss_pred CCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCe
Q psy14130 121 SHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYL 200 (494)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~ 200 (494)
...|.+++....++..... +.|.|||+.+. ..-+.+.+|..+|++++|+++| +.|+|+|.|..
T Consensus 26 a~~~~Fs~~G~~lAvGc~n---------G~vvI~D~~T~-------~iar~lsaH~~pi~sl~WS~dg-r~LltsS~D~s 88 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCAN---------GRVVIYDFDTF-------RIARMLSAHVRPITSLCWSRDG-RKLLTSSRDWS 88 (405)
T ss_pred cceEEeccCcceeeeeccC---------CcEEEEEcccc-------chhhhhhccccceeEEEecCCC-CEeeeecCCce
Confidence 4456665544444443333 36999999988 4556788999999999999999 79999999999
Q ss_pred EEEEECCCCeEEEEecCCCCceE-----------------------------------------------EEEEcCCCCE
Q psy14130 201 IILWDVGKGEALTVIDCHPDVIN-----------------------------------------------CLSFNRDGSR 233 (494)
Q Consensus 201 v~iwd~~~~~~~~~~~~h~~~v~-----------------------------------------------~l~~~~~~~~ 233 (494)
|++||+..|.+++.+. ...+|+ +..|.+.|++
T Consensus 89 i~lwDl~~gs~l~rir-f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~y 167 (405)
T KOG1273|consen 89 IKLWDLLKGSPLKRIR-FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKY 167 (405)
T ss_pred eEEEeccCCCceeEEE-ccCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCCCCE
Confidence 9999998887665543 111111 1225566889
Q ss_pred EEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCc------e---eE
Q psy14130 234 LVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTP------L---AL 304 (494)
Q Consensus 234 l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~------~---~~ 304 (494)
+++|...|.+.++|..+-+++..++...-..+..+.++..+. .+..- +.|+.||.|+++....+ . .+
T Consensus 168 IitGtsKGkllv~~a~t~e~vas~rits~~~IK~I~~s~~g~-~liiN---tsDRvIR~ye~~di~~~~r~~e~e~~~K~ 243 (405)
T KOG1273|consen 168 IITGTSKGKLLVYDAETLECVASFRITSVQAIKQIIVSRKGR-FLIIN---TSDRVIRTYEISDIDDEGRDGEVEPEHKL 243 (405)
T ss_pred EEEecCcceEEEEecchheeeeeeeechheeeeEEEEeccCc-EEEEe---cCCceEEEEehhhhcccCccCCcChhHHH
Confidence 999999999999999999999888776633378888887744 44444 48999999998742211 0 01
Q ss_pred eeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec-cceeEEEEe
Q psy14130 305 ETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ-CEIFRFFKL 383 (494)
Q Consensus 305 ~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~-~~~~~~~~l 383 (494)
+..-......+++|+.+|.+++++...-..+++|+-..|.. .+.+.+-+ +.....+.|+|-+.++++- .+.+++|..
T Consensus 244 qDvVNk~~Wk~ccfs~dgeYv~a~s~~aHaLYIWE~~~GsL-VKILhG~k-gE~l~DV~whp~rp~i~si~sg~v~iw~~ 321 (405)
T KOG1273|consen 244 QDVVNKLQWKKCCFSGDGEYVCAGSARAHALYIWEKSIGSL-VKILHGTK-GEELLDVNWHPVRPIIASIASGVVYIWAV 321 (405)
T ss_pred HHHHhhhhhhheeecCCccEEEeccccceeEEEEecCCcce-eeeecCCc-hhheeecccccceeeeeeccCCceEEEEe
Confidence 11112234677899999999966666677899999999986 45544432 4567889999999988884 889999987
Q ss_pred eC
Q psy14130 384 HT 385 (494)
Q Consensus 384 ~~ 385 (494)
..
T Consensus 322 ~~ 323 (405)
T KOG1273|consen 322 VQ 323 (405)
T ss_pred ec
Confidence 65
|
|
| >KOG0650|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=2e-19 Score=168.38 Aligned_cols=306 Identities=18% Similarity=0.198 Sum_probs=189.9
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 82 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~ 82 (494)
+||++.|.||+.+| .|.+|+|||.||+|| +|.+.+.+.. ..+... ..-.-+++++.....+..++-+..++++
T Consensus 397 rGHtg~Vr~iSvdp-~G~wlasGsdDGtvr-iWEi~TgRcv--r~~~~d---~~I~~vaw~P~~~~~vLAvA~~~~~~iv 469 (733)
T KOG0650|consen 397 RGHTGLVRSISVDP-SGEWLASGSDDGTVR-IWEIATGRCV--RTVQFD---SEIRSVAWNPLSDLCVLAVAVGECVLIV 469 (733)
T ss_pred eccCCeEEEEEecC-CcceeeecCCCCcEE-EEEeecceEE--EEEeec---ceeEEEEecCCCCceeEEEEecCceEEe
Confidence 89999999999999 899999999999999 9988766532 111110 0111123444433333333333333333
Q ss_pred eccccccccCCCCceeecccCCcc-------ce--------eecee-ccCCccCCCeeeeC--CceEEEEEeecCCcEEE
Q psy14130 83 PIHRFRGVRSSKFRHVYGVHSKRD-------GC--------YDNVP-ITRNAHDSHFCAAN--PKFVAVVTEVAGGGAFL 144 (494)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~--------~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~ 144 (494)
+-.....+....-...+....... .+ ...+. +......+.-+.|+ ..+++.+...++.
T Consensus 470 np~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~---- 545 (733)
T KOG0650|consen 470 NPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGN---- 545 (733)
T ss_pred CccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCc----
Confidence 211111111111111111110000 00 00000 00011111222221 2333333322222
Q ss_pred EEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEE
Q psy14130 145 VLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINC 224 (494)
Q Consensus 145 ~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~ 224 (494)
..|.|.++..... ...+.-..+.|.++.|+|.. .+|+.++. ..|+|||+..++.+..+......|.+
T Consensus 546 ----~~VliHQLSK~~s-------Q~PF~kskG~vq~v~FHPs~-p~lfVaTq-~~vRiYdL~kqelvKkL~tg~kwiS~ 612 (733)
T KOG0650|consen 546 ----KSVLIHQLSKRKS-------QSPFRKSKGLVQRVKFHPSK-PYLFVATQ-RSVRIYDLSKQELVKKLLTGSKWISS 612 (733)
T ss_pred ----ceEEEEecccccc-------cCchhhcCCceeEEEecCCC-ceEEEEec-cceEEEehhHHHHHHHHhcCCeeeee
Confidence 2588888887633 23344456779999999997 46666664 67999999888777777767778999
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEeCCCC-ceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCC------C
Q psy14130 225 LSFNRDGSRLVTTCKDKTVRVLDPRTG-LVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEN------D 297 (494)
Q Consensus 225 l~~~~~~~~l~s~~~d~~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~------~ 297 (494)
++.+|.|..|+.|+.|+++..+|+.-+ ++.+++..|... +..++|++. --|+++| +.|+++.|+.-. .
T Consensus 613 msihp~GDnli~gs~d~k~~WfDldlsskPyk~lr~H~~a-vr~Va~H~r-yPLfas~---sdDgtv~Vfhg~VY~Dl~q 687 (733)
T KOG0650|consen 613 MSIHPNGDNLILGSYDKKMCWFDLDLSSKPYKTLRLHEKA-VRSVAFHKR-YPLFASG---SDDGTVIVFHGMVYNDLLQ 687 (733)
T ss_pred eeecCCCCeEEEecCCCeeEEEEcccCcchhHHhhhhhhh-hhhhhhccc-cceeeee---cCCCcEEEEeeeeehhhhc
Confidence 999999999999999999999999865 477888888887 899999987 6788999 789999998632 1
Q ss_pred CCCceeEeeecC-----CCceEEeEEeCCCCEEEEEEeCCCcEEEE
Q psy14130 298 LNTPLALETVDS-----SSGVLFPYYDHDTRILFLAGKGDGNIRYY 338 (494)
Q Consensus 298 ~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~g~~dg~i~~w 338 (494)
......+..+.+ ..+|+...|+|...+| .+++.||+|++|
T Consensus 688 npliVPlK~L~gH~~~~~~gVLd~~wHP~qpWL-fsAGAd~tirlf 732 (733)
T KOG0650|consen 688 NPLIVPLKRLRGHEKTNDLGVLDTIWHPRQPWL-FSAGADGTIRLF 732 (733)
T ss_pred CCceEeeeeccCceeecccceEeecccCCCceE-EecCCCceEEee
Confidence 111222222222 2458889999999999 566699999998
|
|
| >KOG0639|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.6e-20 Score=168.05 Aligned_cols=229 Identities=17% Similarity=0.183 Sum_probs=179.4
Q ss_pred CCcEEEEEEcCcEEEEEcCCCCCCCCcccceEeccc--ccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEE--EE
Q psy14130 139 GGGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHG--HKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEAL--TV 214 (494)
Q Consensus 139 ~~g~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~--h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~--~~ 214 (494)
....++..+-+-|+|||+...+.. .++..|.. ....|.++...|+| +.|++|+.-.++.|||+....+. ..
T Consensus 430 ~trhVyTgGkgcVKVWdis~pg~k----~PvsqLdcl~rdnyiRSckL~pdg-rtLivGGeastlsiWDLAapTprikae 504 (705)
T KOG0639|consen 430 PTRHVYTGGKGCVKVWDISQPGNK----SPVSQLDCLNRDNYIRSCKLLPDG-RTLIVGGEASTLSIWDLAAPTPRIKAE 504 (705)
T ss_pred CcceeEecCCCeEEEeeccCCCCC----CccccccccCcccceeeeEecCCC-ceEEeccccceeeeeeccCCCcchhhh
Confidence 334455555567999999876433 23333332 45678999999999 78999999999999999865543 23
Q ss_pred ecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEe
Q psy14130 215 IDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWD 294 (494)
Q Consensus 215 ~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd 294 (494)
+....-.++.++.+||.+..++++.||.|+|||+++...++.+.+|... ..++..++++.+|.+ | +-|.+||-||
T Consensus 505 ltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDG-ascIdis~dGtklWT-G---GlDntvRcWD 579 (705)
T KOG0639|consen 505 LTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDG-ASCIDISKDGTKLWT-G---GLDNTVRCWD 579 (705)
T ss_pred cCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCCC-ceeEEecCCCceeec-C---CCccceeehh
Confidence 4444456788999999999999999999999999999999999999998 889998888555554 4 4899999999
Q ss_pred CCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec
Q psy14130 295 ENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ 374 (494)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~ 374 (494)
++...++ ...+-.+.|.++.++|++.+| +.|-..+.+.+-.....+.+ .+ +.+...|.++.|.+-|..+++.
T Consensus 580 lregrql---qqhdF~SQIfSLg~cP~~dWl-avGMens~vevlh~skp~ky--ql--hlheScVLSlKFa~cGkwfvSt 651 (705)
T KOG0639|consen 580 LREGRQL---QQHDFSSQIFSLGYCPTGDWL-AVGMENSNVEVLHTSKPEKY--QL--HLHESCVLSLKFAYCGKWFVST 651 (705)
T ss_pred hhhhhhh---hhhhhhhhheecccCCCccce-eeecccCcEEEEecCCccce--ee--cccccEEEEEEecccCceeeec
Confidence 9987664 334556789999999999999 88989998888777665532 22 3346789999999999999984
Q ss_pred --cceeEEEEeeC
Q psy14130 375 --CEIFRFFKLHT 385 (494)
Q Consensus 375 --~~~~~~~~l~~ 385 (494)
|..+..|+.-.
T Consensus 652 GkDnlLnawrtPy 664 (705)
T KOG0639|consen 652 GKDNLLNAWRTPY 664 (705)
T ss_pred CchhhhhhccCcc
Confidence 78888887654
|
|
| >KOG4328|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=9.2e-19 Score=159.07 Aligned_cols=296 Identities=13% Similarity=0.150 Sum_probs=200.1
Q ss_pred CccccceeeEEECCCCC-eeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEE
Q psy14130 3 KLYRGPVLDIKWNPFND-NIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLV 81 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~-~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v 81 (494)
|-|.++|++++|||... +++|+|..-|.|- +|+...... .... +..
T Consensus 183 kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG-~Wn~~~~~~-d~d~---------------------v~~---------- 229 (498)
T KOG4328|consen 183 KVTDRRITSLAFHPTENRKLVAVGDKGGQVG-LWNFGTQEK-DKDG---------------------VYL---------- 229 (498)
T ss_pred EecccceEEEEecccCcceEEEEccCCCcEE-EEecCCCCC-ccCc---------------------eEE----------
Confidence 56889999999999766 7999999999998 787531110 0000 000
Q ss_pred EeccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCC
Q psy14130 82 LPIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGL 161 (494)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~ 161 (494)
...++..+..+.++|...+.++.++-+| +|++-|++....
T Consensus 230 --------------------------------f~~hs~~Vs~l~F~P~n~s~i~ssSyDG--------tiR~~D~~~~i~ 269 (498)
T KOG4328|consen 230 --------------------------------FTPHSGPVSGLKFSPANTSQIYSSSYDG--------TIRLQDFEGNIS 269 (498)
T ss_pred --------------------------------eccCCccccceEecCCChhheeeeccCc--------eeeeeeecchhh
Confidence 0111123334445555545555555555 799999887633
Q ss_pred CCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeE-EEEecCCCCceEEEEEcCC-CCEEEEEeC
Q psy14130 162 SGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEA-LTVIDCHPDVINCLSFNRD-GSRLVTTCK 239 (494)
Q Consensus 162 ~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~-~~~~~~h~~~v~~l~~~~~-~~~l~s~~~ 239 (494)
+.+..+......+.++.|+.+.. .++.+..=|...+||++++.. ...+.-|...|++|+++|- ..+|+|++.
T Consensus 270 -----e~v~s~~~d~~~fs~~d~~~e~~-~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~ 343 (498)
T KOG4328|consen 270 -----EEVLSLDTDNIWFSSLDFSAESR-SVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFLATASL 343 (498)
T ss_pred -----HHHhhcCccceeeeeccccCCCc-cEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCchheeeccc
Confidence 33334444556678889988874 555555556999999998654 6667779999999999995 458999999
Q ss_pred CCeEEEEeCCCCce----EEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCC---CCCCceeEeeecCC--
Q psy14130 240 DKTVRVLDPRTGLV----ISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEN---DLNTPLALETVDSS-- 310 (494)
Q Consensus 240 d~~v~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~---~~~~~~~~~~~~~~-- 310 (494)
|++++|||+|.-.. +.....|... |.++.|+|.++.+++++ .|..|+|||.. ....+.....+.+.
T Consensus 344 D~T~kIWD~R~l~~K~sp~lst~~Hrrs-V~sAyFSPs~gtl~TT~----~D~~IRv~dss~~sa~~~p~~~I~Hn~~t~ 418 (498)
T KOG4328|consen 344 DQTAKIWDLRQLRGKASPFLSTLPHRRS-VNSAYFSPSGGTLLTTC----QDNEIRVFDSSCISAKDEPLGTIPHNNRTG 418 (498)
T ss_pred CcceeeeehhhhcCCCCcceecccccce-eeeeEEcCCCCceEeec----cCCceEEeecccccccCCccceeeccCccc
Confidence 99999999986432 2334567776 89999999999988888 89999999984 33333333322221
Q ss_pred --CceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCee-EEEEecCCceeee-ccceeEEEEeeC
Q psy14130 311 --SGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQR-GLGFMPKRGCDVT-QCEIFRFFKLHT 385 (494)
Q Consensus 311 --~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~-~~~~~p~~~~~~~-~~~~~~~~~l~~ 385 (494)
-.....+|.|+..++ +.|..-..|-|+|-..++.+..+.... ...|. -..|+|-+..+++ +...+++|-.+.
T Consensus 419 RwlT~fKA~W~P~~~li-~vg~~~r~IDv~~~~~~q~v~el~~P~--~~tI~~vn~~HP~~~~~~aG~~s~Gki~vft~ 494 (498)
T KOG4328|consen 419 RWLTPFKAAWDPDYNLI-VVGRYPRPIDVFDGNGGQMVCELHDPE--SSTIPSVNEFHPMRDTLAAGGNSSGKIYVFTN 494 (498)
T ss_pred ccccchhheeCCCccEE-EEeccCcceeEEcCCCCEEeeeccCcc--ccccccceeecccccceeccCCccceEEEEec
Confidence 124457999988888 888888889999988887543332221 11233 3579998885555 466677775554
|
|
| >KOG1539|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.8e-19 Score=171.88 Aligned_cols=198 Identities=18% Similarity=0.215 Sum_probs=159.2
Q ss_pred eEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC
Q psy14130 130 FVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKG 209 (494)
Q Consensus 130 ~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~ 209 (494)
..+++.+..|+-.++....+.|-+|++.++-....+. .-..|.++|++++....+ +.++|++.+|.+++||..+.
T Consensus 451 ~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~----~~~ah~~~V~gla~D~~n-~~~vsa~~~Gilkfw~f~~k 525 (910)
T KOG1539|consen 451 ATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFG----DSPAHKGEVTGLAVDGTN-RLLVSAGADGILKFWDFKKK 525 (910)
T ss_pred eEEEEEeccCceEEEeccCCeEEEEEcccCeeecccc----cCccccCceeEEEecCCC-ceEEEccCcceEEEEecCCc
Confidence 3455554444444444556789999999984332221 125799999999999887 79999999999999999988
Q ss_pred eEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCce
Q psy14130 210 EALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQ 289 (494)
Q Consensus 210 ~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~ 289 (494)
..+..+. -...+.++..+.....++.+..|-.|+++|..+.+.++.+.+|.+. ++.+.|+|++..+++++ .|++
T Consensus 526 ~l~~~l~-l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nr-itd~~FS~DgrWlisas----mD~t 599 (910)
T KOG1539|consen 526 VLKKSLR-LGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNR-ITDMTFSPDGRWLISAS----MDST 599 (910)
T ss_pred ceeeeec-cCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccccc-eeeeEeCCCCcEEEEee----cCCc
Confidence 8777776 4567888999988889999999999999999999999999999988 99999999966666665 8999
Q ss_pred EEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCC-CcEEEEEeeC
Q psy14130 290 VGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGD-GNIRYYELTN 342 (494)
Q Consensus 290 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~d-g~i~~wd~~~ 342 (494)
|++||+.+... +..+.....+.++.|+|+|.+| ++...| .-|++|--.+
T Consensus 600 Ir~wDlpt~~l---ID~~~vd~~~~sls~SPngD~L-AT~Hvd~~gIylWsNks 649 (910)
T KOG1539|consen 600 IRTWDLPTGTL---IDGLLVDSPCTSLSFSPNGDFL-ATVHVDQNGIYLWSNKS 649 (910)
T ss_pred EEEEeccCcce---eeeEecCCcceeeEECCCCCEE-EEEEecCceEEEEEchh
Confidence 99999988654 3333355788999999999999 777777 6699997554
|
|
| >KOG4378|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=6e-19 Score=161.62 Aligned_cols=201 Identities=15% Similarity=0.212 Sum_probs=162.9
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCC-CCceEEEEEc
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCH-PDVINCLSFN 228 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h-~~~v~~l~~~ 228 (494)
.|+|||+... ...+.+++|+..|+++.++-.. .+||+++..|.|.|..+.++.....|... ...|.-+.|+
T Consensus 102 ~Vkiwdl~~k-------l~hr~lkdh~stvt~v~YN~~D-eyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsvRll~ys 173 (673)
T KOG4378|consen 102 CVKIWDLRAK-------LIHRFLKDHQSTVTYVDYNNTD-EYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVRLLRYS 173 (673)
T ss_pred eeeehhhHHH-------HHhhhccCCcceeEEEEecCCc-ceeEEeccCCcEEEEecccCccccceecCCCCeEEEeecc
Confidence 6999999865 5667889999999999999987 69999999999999999999888788743 4456689999
Q ss_pred CCCC-EEEEEeCCCeEEEEeCCCCceEEEe-eecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEee
Q psy14130 229 RDGS-RLVTTCKDKTVRVLDPRTGLVISQG-VCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALET 306 (494)
Q Consensus 229 ~~~~-~l~s~~~d~~v~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~ 306 (494)
+..+ +|.+++.+|.|.+||+....++..+ ..|..+ ...++|+|.+..|+++- +.|..|.+||++...... .
T Consensus 174 ~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP-~~gicfspsne~l~vsV---G~Dkki~~yD~~s~~s~~---~ 246 (673)
T KOG4378|consen 174 PSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAP-CRGICFSPSNEALLVSV---GYDKKINIYDIRSQASTD---R 246 (673)
T ss_pred cccceeeEeeccCCeEEEEeccCCCcccchhhhccCC-cCcceecCCccceEEEe---cccceEEEeecccccccc---e
Confidence 9766 5667889999999999877766554 567666 88999999877777665 589999999998644322 2
Q ss_pred ecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCC
Q psy14130 307 VDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKR 368 (494)
Q Consensus 307 ~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~ 368 (494)
+....+...++|+++|.+| ++|...|.|..||++..+.....+..| ...|++++|-|.-
T Consensus 247 l~y~~Plstvaf~~~G~~L-~aG~s~G~~i~YD~R~~k~Pv~v~sah--~~sVt~vafq~s~ 305 (673)
T KOG4378|consen 247 LTYSHPLSTVAFSECGTYL-CAGNSKGELIAYDMRSTKAPVAVRSAH--DASVTRVAFQPSP 305 (673)
T ss_pred eeecCCcceeeecCCceEE-EeecCCceEEEEecccCCCCceEeeec--ccceeEEEeeecc
Confidence 3344578889999999999 999999999999999876545555444 5669999998764
|
|
| >KOG0321|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.7e-19 Score=166.54 Aligned_cols=225 Identities=17% Similarity=0.210 Sum_probs=156.7
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe------------------
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE------------------ 210 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~------------------ 210 (494)
.++++||+.+.++.. ...+.||...|.+++|+|.....+++|+.||.|.|||++...
T Consensus 122 sT~r~Wdvk~s~l~G-----~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ 196 (720)
T KOG0321|consen 122 STIRPWDVKTSRLVG-----GRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTA 196 (720)
T ss_pred ceeeeeeeccceeec-----ceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCC
Confidence 479999999985421 224789999999999999998999999999999999985322
Q ss_pred --E-------EEEecCCCCceEE---EEEcCCCCEEEEEeC-CCeEEEEeCCCCceEE--------EeeecCC--CCceE
Q psy14130 211 --A-------LTVIDCHPDVINC---LSFNRDGSRLVTTCK-DKTVRVLDPRTGLVIS--------QGVCHPG--TRSSK 267 (494)
Q Consensus 211 --~-------~~~~~~h~~~v~~---l~~~~~~~~l~s~~~-d~~v~iwd~~~~~~~~--------~~~~~~~--~~~~~ 267 (494)
+ +.....+...|.+ +.+..|...||+++. |+.|++||++...... .+..|.. ..++.
T Consensus 197 ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~n 276 (720)
T KOG0321|consen 197 PTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVN 276 (720)
T ss_pred CCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEE
Confidence 0 1112234455555 556668889999887 9999999999765322 2222311 11455
Q ss_pred EEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecC--CCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCc
Q psy14130 268 AVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDS--SSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERP 345 (494)
Q Consensus 268 ~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~ 345 (494)
+.....|.++++.+ .|+.|++|+++...........++ ..--..-..+||+.++ ++|+.|...++|.+.+.+.
T Consensus 277 L~lDssGt~L~AsC----tD~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l-~SgSsd~~ayiw~vs~~e~ 351 (720)
T KOG0321|consen 277 LILDSSGTYLFASC----TDNSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSL-LSGSSDEQAYIWVVSSPEA 351 (720)
T ss_pred EEecCCCCeEEEEe----cCCcEEEEeccccCcCchhhccCcccceeeeeeecCCCCceE-eccCCCcceeeeeecCccC
Confidence 55555667888887 799999999987543222111111 1122334678999999 9999999999999998764
Q ss_pred eEEecccccCCCCeeEEEEecC--Cceee-eccceeEEEEeeC
Q psy14130 346 YIHFLNQSLSGAPQRGLGFMPK--RGCDV-TQCEIFRFFKLHT 385 (494)
Q Consensus 346 ~~~~~~~~~~~~~v~~~~~~p~--~~~~~-~~~~~~~~~~l~~ 385 (494)
-...+.. +...|+.++|.|. ...+. +.|..+++|++..
T Consensus 352 ~~~~l~G--ht~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l~~ 392 (720)
T KOG0321|consen 352 PPALLLG--HTREVTTVRWLPSATTPVATCSDDFRVKIWRLSN 392 (720)
T ss_pred ChhhhhC--cceEEEEEeeccccCCCceeeccCcceEEEeccC
Confidence 3333333 3456999999874 33333 3588999999965
|
|
| >KOG1332|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.8e-20 Score=152.76 Aligned_cols=206 Identities=13% Similarity=0.148 Sum_probs=163.7
Q ss_pred cccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC---eEEEEecCCCCceEEEEEcC--CCCEEEEEeCCCeEEEE
Q psy14130 172 LHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKG---EALTVIDCHPDVINCLSFNR--DGSRLVTTCKDKTVRVL 246 (494)
Q Consensus 172 ~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~---~~~~~~~~h~~~v~~l~~~~--~~~~l~s~~~d~~v~iw 246 (494)
...|.+.|..+...--| ..||||+.|++|+|+.++.. +.+.++.+|.++|..++|.. -|.+|++++.||+|.||
T Consensus 7 dt~H~D~IHda~lDyyg-krlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiW 85 (299)
T KOG1332|consen 7 DTQHEDMIHDAQLDYYG-KRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIW 85 (299)
T ss_pred hhhhhhhhhHhhhhhhc-ceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEE
Confidence 34699999988888888 79999999999999999864 46788999999999999987 79999999999999999
Q ss_pred eCCCCc--eEEEeeecCCCCceEEEEECCC-CeEEEEEecCCCCceEEEEeCCCC-CCceeEeeecCCCceEEeEEeCC-
Q psy14130 247 DPRTGL--VISQGVCHPGTRSSKAVFIGDT-GRIVTTGFSRHSDRQVGLWDENDL-NTPLALETVDSSSGVLFPYYDHD- 321 (494)
Q Consensus 247 d~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~l~~~g~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~v~~~~~~~~- 321 (494)
.-.+|+ .......|... +++++|.|.+ +.+|+++ ++||.|.|.+.++. ..........|..+|.++.|.|-
T Consensus 86 ke~~g~w~k~~e~~~h~~S-VNsV~wapheygl~Laca---sSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~ 161 (299)
T KOG1332|consen 86 KEENGRWTKAYEHAAHSAS-VNSVAWAPHEYGLLLACA---SSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPAS 161 (299)
T ss_pred ecCCCchhhhhhhhhhccc-ceeecccccccceEEEEe---eCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcC
Confidence 998886 45566788888 9999999874 5688888 89999999998764 22222223346788999999986
Q ss_pred --C-----------CEEEEEEeCCCcEEEEEeeCCCceEE-ecccccCCCCeeEEEEecCCc----eeee--ccceeEEE
Q psy14130 322 --T-----------RILFLAGKGDGNIRYYELTNERPYIH-FLNQSLSGAPQRGLGFMPKRG----CDVT--QCEIFRFF 381 (494)
Q Consensus 322 --~-----------~~l~~~g~~dg~i~~wd~~~~~~~~~-~~~~~~~~~~v~~~~~~p~~~----~~~~--~~~~~~~~ 381 (494)
| +.| ++|+.|..|+||+..+++-... .+. .|.+-|+.++|.|.-. ++++ .|+.+-||
T Consensus 162 ~~g~~~~~~~~~~~krl-vSgGcDn~VkiW~~~~~~w~~e~~l~--~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIw 238 (299)
T KOG1332|consen 162 APGSLVDQGPAAKVKRL-VSGGCDNLVKIWKFDSDSWKLERTLE--GHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIW 238 (299)
T ss_pred CCccccccCccccccee-eccCCccceeeeecCCcchhhhhhhh--hcchhhhhhhhccccCCCceeeEEecCCCcEEEE
Confidence 4 335 9999999999999998743222 122 3467899999999643 4444 48899999
Q ss_pred EeeC
Q psy14130 382 KLHT 385 (494)
Q Consensus 382 ~l~~ 385 (494)
....
T Consensus 239 t~~~ 242 (299)
T KOG1332|consen 239 TKDE 242 (299)
T ss_pred EecC
Confidence 7664
|
|
| >KOG0307|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.1e-19 Score=182.37 Aligned_cols=234 Identities=19% Similarity=0.231 Sum_probs=181.1
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEe--cCCCCceEEE
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVI--DCHPDVINCL 225 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~--~~h~~~v~~l 225 (494)
++.|-+||...- ....-...+.+...|++.|..+.|++...++||+|+.||.|.|||+..-+.-.+. ....+.|.++
T Consensus 89 dG~I~ly~p~~~-~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~l 167 (1049)
T KOG0307|consen 89 DGNIVLYDPASI-IANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCL 167 (1049)
T ss_pred CCceEEecchhh-ccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEe
Confidence 457999997652 1111114556777899999999999998789999999999999999875433333 1246789999
Q ss_pred EEcCC-CCEEEEEeCCCeEEEEeCCCCceEEEeeecCC-CCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCcee
Q psy14130 226 SFNRD-GSRLVTTCKDKTVRVLDPRTGLVISQGVCHPG-TRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLA 303 (494)
Q Consensus 226 ~~~~~-~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~ 303 (494)
+|+.. ...|++++.+|++.|||+|..+.+..+..+.+ ..+..+.|+|+...-++++-.....-.|.+||+|....+..
T Consensus 168 sWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k 247 (1049)
T KOG0307|consen 168 SWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLK 247 (1049)
T ss_pred ccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchh
Confidence 99984 55788999999999999999988888776665 33678999999776666653334445799999998777766
Q ss_pred EeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCce-eeec--cceeEE
Q psy14130 304 LETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGC-DVTQ--CEIFRF 380 (494)
Q Consensus 304 ~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~-~~~~--~~~~~~ 380 (494)
.. -.|..+|+++.|++.+..++++++.|+.|.+|+.++++.+..+-. .++-+..+.|.|...- ++.+ ++.+.|
T Consensus 248 ~~-~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~---~~nW~fdv~w~pr~P~~~A~asfdgkI~I 323 (1049)
T KOG0307|consen 248 IL-EGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPA---QGNWCFDVQWCPRNPSVMAAASFDGKISI 323 (1049)
T ss_pred hh-cccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCC---CCcceeeeeecCCCcchhhhheeccceee
Confidence 54 347789999999999866669999999999999999986544322 3567899999998763 3332 999999
Q ss_pred EEeeCC
Q psy14130 381 FKLHTT 386 (494)
Q Consensus 381 ~~l~~~ 386 (494)
+.+...
T Consensus 324 ~sl~~~ 329 (1049)
T KOG0307|consen 324 YSLQGT 329 (1049)
T ss_pred eeeecC
Confidence 999873
|
|
| >KOG1310|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.9e-19 Score=166.77 Aligned_cols=225 Identities=16% Similarity=0.182 Sum_probs=171.5
Q ss_pred ceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEe-cCCCCceEEEEEcC--CCCEEEEEeCCCeEE
Q psy14130 168 WIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVI-DCHPDVINCLSFNR--DGSRLVTTCKDKTVR 244 (494)
Q Consensus 168 ~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~-~~h~~~v~~l~~~~--~~~~l~s~~~d~~v~ 244 (494)
...+|+||++.|+|++|+.+| .+|+|||.|-.+.|||....+.+..+ .+|...|.++.|-| +.++++||..|+.|+
T Consensus 42 lE~eL~GH~GCVN~LeWn~dG-~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~ 120 (758)
T KOG1310|consen 42 LEAELTGHTGCVNCLEWNADG-ELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIK 120 (758)
T ss_pred hhhhhccccceecceeecCCC-CEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEE
Confidence 346789999999999999999 69999999999999999888888777 48999999999999 567999999999999
Q ss_pred EEeCCCC----------ceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEe--------e
Q psy14130 245 VLDPRTG----------LVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALE--------T 306 (494)
Q Consensus 245 iwd~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~--------~ 306 (494)
++|+... .....+.+|... +..++-.|++...+.++ ++||+|+.+|+|.......-. .
T Consensus 121 lfdl~~~~~~~~d~~~~~~~~~~~cht~r-VKria~~p~~Phtfwsa---sEDGtirQyDiREph~c~p~~~~~~~l~ny 196 (758)
T KOG1310|consen 121 LFDLDSSKEGGMDHGMEETTRCWSCHTDR-VKRIATAPNGPHTFWSA---SEDGTIRQYDIREPHVCNPDEDCPSILVNY 196 (758)
T ss_pred EEecccccccccccCccchhhhhhhhhhh-hhheecCCCCCceEEEe---cCCcceeeecccCCccCCccccccHHHHHh
Confidence 9999852 245556788877 88999999887888777 799999999998632211110 0
Q ss_pred ecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCC------------------ceEEeccccc-CC--------CCe
Q psy14130 307 VDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNER------------------PYIHFLNQSL-SG--------APQ 359 (494)
Q Consensus 307 ~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~------------------~~~~~~~~~~-~~--------~~v 359 (494)
...--...++..+|...++++.|+.|-..++||.+... ++..+...+. .. ..+
T Consensus 197 ~~~lielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~gn~~~~~~~~ 276 (758)
T KOG1310|consen 197 NPQLIELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQGNLDRYITCC 276 (758)
T ss_pred chhhheeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCcccccccceeee
Confidence 11123567899999999998999999999999943211 1122222221 11 124
Q ss_pred eEEEEecCCceeee--ccceeEEEEeeCCCCeEEEeEEEeeCC
Q psy14130 360 RGLGFMPKRGCDVT--QCEIFRFFKLHTTRNMCEPISMIVPRK 400 (494)
Q Consensus 360 ~~~~~~p~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~pr~ 400 (494)
+-++|+|+|..++. +++.+.+++++. .-.|..+..|++
T Consensus 277 t~vtfnpNGtElLvs~~gEhVYlfdvn~---~~~~~~y~~~~~ 316 (758)
T KOG1310|consen 277 TYVTFNPNGTELLVSWGGEHVYLFDVNE---DKSPTPYFLPIE 316 (758)
T ss_pred EEEEECCCCcEEEEeeCCeEEEEEeecC---CCCceeecCccc
Confidence 66789999876555 599999999998 345667777765
|
|
| >KOG0321|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.1e-18 Score=164.71 Aligned_cols=229 Identities=17% Similarity=0.182 Sum_probs=162.5
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEE--ecCCCCceEEEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTV--IDCHPDVINCLSF 227 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~--~~~h~~~v~~l~~ 227 (494)
.|.++|....... .....+.....|...|..+.|-| |+..|++++.|.++++||+.+++.+.. +.+|.+.|.+++|
T Consensus 75 ~i~l~dt~~~~fr-~ee~~lk~~~aH~nAifDl~wap-ge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf 152 (720)
T KOG0321|consen 75 GIILFDTKSIVFR-LEERQLKKPLAHKNAIFDLKWAP-GESLLVSASGDSTIRPWDVKTSRLVGGRLNLGHTGSVKSECF 152 (720)
T ss_pred ceeeecchhhhcc-hhhhhhcccccccceeEeeccCC-CceeEEEccCCceeeeeeeccceeecceeecccccccchhhh
Confidence 5888887654322 00012345567999999999999 668999999999999999999888766 8899999999999
Q ss_pred cCC-CCEEEEEeCCCeEEEEeCCCCc---------------------------eEEEeeecCCCCceE---EEEECCCCe
Q psy14130 228 NRD-GSRLVTTCKDKTVRVLDPRTGL---------------------------VISQGVCHPGTRSSK---AVFIGDTGR 276 (494)
Q Consensus 228 ~~~-~~~l~s~~~d~~v~iwd~~~~~---------------------------~~~~~~~~~~~~~~~---~~~~~~~~~ 276 (494)
.|. ...|++|+.||.|.|||++-.. .+....++... +.. +.+..|...
T Consensus 153 ~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~t-i~ssvTvv~fkDe~t 231 (720)
T KOG0321|consen 153 MPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNT-IFSSVTVVLFKDEST 231 (720)
T ss_pred ccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCc-eeeeeEEEEEeccce
Confidence 995 5588999999999999987432 11112233332 333 556666677
Q ss_pred EEEEEecCCCCceEEEEeCCCCCCceeEee-----e-cC---CCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceE
Q psy14130 277 IVTTGFSRHSDRQVGLWDENDLNTPLALET-----V-DS---SSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYI 347 (494)
Q Consensus 277 l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~-----~-~~---~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~ 347 (494)
|+++| ..|+.|+|||+++......... . .+ ..++.++..+..|.+|||++ .|+.|++|++..-..-.
T Consensus 232 laSag---a~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsC-tD~sIy~ynm~s~s~sP 307 (720)
T KOG0321|consen 232 LASAG---AADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASC-TDNSIYFYNMRSLSISP 307 (720)
T ss_pred eeecc---CCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEe-cCCcEEEEeccccCcCc
Confidence 77777 5699999999997544322211 1 11 34678888999999997776 59999999998754211
Q ss_pred -EecccccCCCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 348 -HFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 348 -~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
....+.........-..+|++..++++ |+...+|.+..
T Consensus 308 ~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~ 348 (720)
T KOG0321|consen 308 VAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSS 348 (720)
T ss_pred hhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecC
Confidence 111111112223334578999999886 99999999876
|
|
| >KOG2096|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.3e-18 Score=148.68 Aligned_cols=209 Identities=18% Similarity=0.226 Sum_probs=151.4
Q ss_pred EecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe------------------------------------EEE
Q psy14130 170 MDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE------------------------------------ALT 213 (494)
Q Consensus 170 ~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~------------------------------------~~~ 213 (494)
..|+||.+.|++++|+.+| ..|||++.|++|++||++.-. .+.
T Consensus 80 ~~LKgH~~~vt~~~FsSdG-K~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l~ 158 (420)
T KOG2096|consen 80 SVLKGHKKEVTDVAFSSDG-KKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKLC 158 (420)
T ss_pred hhhhccCCceeeeEEcCCC-ceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEEE
Confidence 4788999999999999999 799999999999999984210 011
Q ss_pred Eec-----------------------CCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEE
Q psy14130 214 VID-----------------------CHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVF 270 (494)
Q Consensus 214 ~~~-----------------------~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 270 (494)
.+. .|.-.|..+-...++.+|++++.|..|.+||++ |+.+..+...... ...++.
T Consensus 159 vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~-n~~aav 236 (420)
T KOG2096|consen 159 VYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSS-NYDAAV 236 (420)
T ss_pred EEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-Cceeeeecccccc-ccceee
Confidence 110 123345555566678899999999999999999 8988888776665 677788
Q ss_pred ECCCCeEEEEEecCCCCceEEEEeCC---CC--CCce-eEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCC-
Q psy14130 271 IGDTGRIVTTGFSRHSDRQVGLWDEN---DL--NTPL-ALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNE- 343 (494)
Q Consensus 271 ~~~~~~l~~~g~~~~~d~~i~iwd~~---~~--~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~- 343 (494)
+|++..+.++|| --.|++|.+- ++ +... .+...+|...|..++|+++.+.+ ++.+.||++++||..-.
T Consensus 237 SP~GRFia~~gF----TpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~-vtvSkDG~wriwdtdVrY 311 (420)
T KOG2096|consen 237 SPDGRFIAVSGF----TPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRA-VTVSKDGKWRIWDTDVRY 311 (420)
T ss_pred CCCCcEEEEecC----CCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCccee-EEEecCCcEEEeeccceE
Confidence 999666677775 5569999853 11 1111 12233577899999999999999 99999999999998532
Q ss_pred ---C---ceEEe-cccccCCCCeeEEEEecCCceeeec-cceeEEEEeeCC
Q psy14130 344 ---R---PYIHF-LNQSLSGAPQRGLGFMPKRGCDVTQ-CEIFRFFKLHTT 386 (494)
Q Consensus 344 ---~---~~~~~-~~~~~~~~~v~~~~~~p~~~~~~~~-~~~~~~~~l~~~ 386 (494)
+ .+... ...+..+.....++++|.|..++.+ ...+++|.-..+
T Consensus 312 ~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~gs~l~~~~se~g 362 (420)
T KOG2096|consen 312 EAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSFGSDLKVFASEDG 362 (420)
T ss_pred ecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeecCCceEEEEcccC
Confidence 1 11111 1122233444489999999988776 778888887663
|
|
| >KOG4328|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.4e-18 Score=157.90 Aligned_cols=229 Identities=17% Similarity=0.198 Sum_probs=174.0
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeE--EEEecCCCCceEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEA--LTVIDCHPDVINCLS 226 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~--~~~~~~h~~~v~~l~ 226 (494)
++|-+||+.+.+.. ..-+..+..|..+|.++.|+|.....+++.|.||+|++-|++.+.. +..+..-...+.++.
T Consensus 210 G~VG~Wn~~~~~~d---~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d 286 (498)
T KOG4328|consen 210 GQVGLWNFGTQEKD---KDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLD 286 (498)
T ss_pred CcEEEEecCCCCCc---cCceEEeccCCccccceEecCCChhheeeeccCceeeeeeecchhhHHHhhcCccceeeeecc
Confidence 47999999633211 1445667889999999999999888999999999999999987643 333333456678899
Q ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCce-EEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCce--e
Q psy14130 227 FNRDGSRLVTTCKDKTVRVLDPRTGLV-ISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPL--A 303 (494)
Q Consensus 227 ~~~~~~~l~s~~~d~~v~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~--~ 303 (494)
|+.+...++.+..=|...+||++++.. ...+..|... +..++++|...++++++ +.|++.+|||+|...... .
T Consensus 287 ~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kK-I~sv~~NP~~p~~laT~---s~D~T~kIWD~R~l~~K~sp~ 362 (498)
T KOG4328|consen 287 FSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKK-ITSVALNPVCPWFLATA---SLDQTAKIWDLRQLRGKASPF 362 (498)
T ss_pred ccCCCccEEEeecccceEEEEeecCCccchhhhhhhcc-cceeecCCCCchheeec---ccCcceeeeehhhhcCCCCcc
Confidence 999888888888878999999998874 5666777774 99999999999999999 899999999999755433 3
Q ss_pred EeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEee----CCCceEEecccccCC--CCeeEEEEecCCceeeec--c
Q psy14130 304 LETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELT----NERPYIHFLNQSLSG--APQRGLGFMPKRGCDVTQ--C 375 (494)
Q Consensus 304 ~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~----~~~~~~~~~~~~~~~--~~v~~~~~~p~~~~~~~~--~ 375 (494)
+..++|...|.++.|||.+..| +|.+.|.+|+|||.. ...+...+......+ -..-..+|.|+..+++.+ -
T Consensus 363 lst~~HrrsV~sAyFSPs~gtl-~TT~~D~~IRv~dss~~sa~~~p~~~I~Hn~~t~RwlT~fKA~W~P~~~li~vg~~~ 441 (498)
T KOG4328|consen 363 LSTLPHRRSVNSAYFSPSGGTL-LTTCQDNEIRVFDSSCISAKDEPLGTIPHNNRTGRWLTPFKAAWDPDYNLIVVGRYP 441 (498)
T ss_pred eecccccceeeeeEEcCCCCce-EeeccCCceEEeecccccccCCccceeeccCcccccccchhheeCCCccEEEEeccC
Confidence 6667888999999999999887 888899999999984 333332322222111 123446799998888876 3
Q ss_pred ceeEEEEeeC
Q psy14130 376 EIFRFFKLHT 385 (494)
Q Consensus 376 ~~~~~~~l~~ 385 (494)
..|-+++-+.
T Consensus 442 r~IDv~~~~~ 451 (498)
T KOG4328|consen 442 RPIDVFDGNG 451 (498)
T ss_pred cceeEEcCCC
Confidence 4466666544
|
|
| >KOG2048|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.2e-17 Score=154.56 Aligned_cols=210 Identities=15% Similarity=0.200 Sum_probs=160.8
Q ss_pred EcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEE--EecCCCCceEE
Q psy14130 147 PIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALT--VIDCHPDVINC 224 (494)
Q Consensus 147 ~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~--~~~~h~~~v~~ 224 (494)
..+.|.-||+.+. ++...+....+.|.+++.+|.+ ..++.|++||.+...+...++... .+...+++|.+
T Consensus 88 ~sg~i~EwDl~~l-------k~~~~~d~~gg~IWsiai~p~~-~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLs 159 (691)
T KOG2048|consen 88 LSGSITEWDLHTL-------KQKYNIDSNGGAIWSIAINPEN-TILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLS 159 (691)
T ss_pred CCceEEEEecccC-------ceeEEecCCCcceeEEEeCCcc-ceEEeecCCceEEEEecCCceEEEEeecccccceEEE
Confidence 3457999999998 7777888889999999999998 799999999988888887776433 34556799999
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEee-----ec--CCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCC
Q psy14130 225 LSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGV-----CH--PGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEND 297 (494)
Q Consensus 225 l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~-----~~--~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~ 297 (494)
++|+|++..|++|+.||.|++||..++..+.... .. ....+.++.+..+ ..+++| .+-|+|++||...
T Consensus 160 lsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd--~tI~sg---DS~G~V~FWd~~~ 234 (691)
T KOG2048|consen 160 LSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRD--STIASG---DSAGTVTFWDSIF 234 (691)
T ss_pred EEecCCccEEEecccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeec--CcEEEe---cCCceEEEEcccC
Confidence 9999999999999999999999999998665221 11 2223667777765 456667 6899999999886
Q ss_pred CCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCc-eEEecccccCCCCeeEEEEecCCceeeec
Q psy14130 298 LNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERP-YIHFLNQSLSGAPQRGLGFMPKRGCDVTQ 374 (494)
Q Consensus 298 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~-~~~~~~~~~~~~~v~~~~~~p~~~~~~~~ 374 (494)
+....... -+...|.+++.++++..+ .+++.|+.|..|...+.+. .......-.+...+++++..++ .++++
T Consensus 235 gTLiqS~~--~h~adVl~Lav~~~~d~v-fsaGvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~~~--~l~sg 307 (691)
T KOG2048|consen 235 GTLIQSHS--CHDADVLALAVADNEDRV-FSAGVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVIEN--ALISG 307 (691)
T ss_pred cchhhhhh--hhhcceeEEEEcCCCCeE-EEccCCCceEEEEecCCccceeeeccccCCcccceeeeeecc--eEEec
Confidence 54433222 255789999999999999 6777999998888877643 3333334445677999999887 44444
|
|
| >KOG4378|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.6e-18 Score=154.87 Aligned_cols=210 Identities=10% Similarity=0.142 Sum_probs=167.5
Q ss_pred cEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEe
Q psy14130 178 RVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQG 257 (494)
Q Consensus 178 ~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~ 257 (494)
.-.|++..... .++++|+..++|+|||++...+.+.+++|...|+++.++....+||+++..|.|.|..+.++....++
T Consensus 81 ~~~Cv~~~s~S-~y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f 159 (673)
T KOG4378|consen 81 NAFCVACASQS-LYEISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTF 159 (673)
T ss_pred hHHHHhhhhcc-eeeeccCcCceeeehhhHHHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccce
Confidence 33455555554 79999999999999999977778889999999999999999999999999999999999998877777
Q ss_pred eecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEE
Q psy14130 258 VCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRY 337 (494)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~ 337 (494)
....+..+..+.|++....+|.+. +.+|.|.+||+.... |..-..-.|..+...++|+|..+.|+++.+.|..|.+
T Consensus 160 ~~~sgqsvRll~ys~skr~lL~~a---sd~G~VtlwDv~g~s-p~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~ 235 (673)
T KOG4378|consen 160 TIDSGQSVRLLRYSPSKRFLLSIA---SDKGAVTLWDVQGMS-PIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINI 235 (673)
T ss_pred ecCCCCeEEEeecccccceeeEee---ccCCeEEEEeccCCC-cccchhhhccCCcCcceecCCccceEEEecccceEEE
Confidence 655555355778999877888888 799999999998644 3333333477788889999999999999999999999
Q ss_pred EEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEeeCCCCeEEEeEEEeeC
Q psy14130 338 YELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHTTRNMCEPISMIVPR 399 (494)
Q Consensus 338 wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~pr 399 (494)
||.+..+.... .....|...++|+++|.+++.+ .+.+..|++.. ...|+......
T Consensus 236 yD~~s~~s~~~----l~y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~---~k~Pv~v~sah 292 (673)
T KOG4378|consen 236 YDIRSQASTDR----LTYSHPLSTVAFSECGTYLCAGNSKGELIAYDMRS---TKAPVAVRSAH 292 (673)
T ss_pred eecccccccce----eeecCCcceeeecCCceEEEeecCCceEEEEeccc---CCCCceEeeec
Confidence 99997654333 2335789999999999999987 55666677766 44455444333
|
|
| >KOG1273|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.7e-18 Score=148.99 Aligned_cols=198 Identities=13% Similarity=0.169 Sum_probs=152.8
Q ss_pred EEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEee
Q psy14130 179 VGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGV 258 (494)
Q Consensus 179 V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~ 258 (494)
..|+.|++.| .+||.|..||.|.|||+.+...-+.+.+|..+|++++|++||+.|+|+|.|..|.+||+..|.+++.+.
T Consensus 26 a~~~~Fs~~G-~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rir 104 (405)
T KOG1273|consen 26 AECCQFSRWG-DYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIR 104 (405)
T ss_pred cceEEeccCc-ceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEE
Confidence 7899999999 799999999999999999998888899999999999999999999999999999999999999998887
Q ss_pred ecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec--CCCceEEeEEeCCCCEEEEEEeCCCcEE
Q psy14130 259 CHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD--SSSGVLFPYYDHDTRILFLAGKGDGNIR 336 (494)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~g~~dg~i~ 336 (494)
.... +..+.|+|...+.+.+. -.+..-.+-++.+......-..-+ ......+..|++.|+++ ++|...|.+.
T Consensus 105 f~sp--v~~~q~hp~k~n~~va~---~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yI-itGtsKGkll 178 (405)
T KOG1273|consen 105 FDSP--VWGAQWHPRKRNKCVAT---IMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYI-ITGTSKGKLL 178 (405)
T ss_pred ccCc--cceeeeccccCCeEEEE---EecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEE-EEecCcceEE
Confidence 6543 78999999755544444 234444455554322111111111 11122334699999999 8999999999
Q ss_pred EEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 337 YYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 337 ~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
+||..+-++...+. ......|+.+-|+.+|.+++.+ |..+|.|++..
T Consensus 179 v~~a~t~e~vas~r--its~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~d 227 (405)
T KOG1273|consen 179 VYDAETLECVASFR--ITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISD 227 (405)
T ss_pred EEecchheeeeeee--echheeeeEEEEeccCcEEEEecCCceEEEEehhh
Confidence 99999987643332 1223678999999999988874 99999999874
|
|
| >KOG0294|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.4e-18 Score=148.47 Aligned_cols=202 Identities=15% Similarity=0.183 Sum_probs=164.8
Q ss_pred cceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCC--EEEEEeCCCeEE
Q psy14130 167 EWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGS--RLVTTCKDKTVR 244 (494)
Q Consensus 167 ~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~--~l~s~~~d~~v~ 244 (494)
.++..+..|.+.|++++.+ + .++||||.|-+|+|||+++...+..+-.|.+.|+++.|.++-+ .|++|+.||.|.
T Consensus 34 ~~lF~~~aH~~sitavAVs--~-~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~ 110 (362)
T KOG0294|consen 34 KPLFAFSAHAGSITALAVS--G-PYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHII 110 (362)
T ss_pred eccccccccccceeEEEec--c-eeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCCCcEE
Confidence 4456778899999999998 3 5999999999999999999999999989999999999999765 899999999999
Q ss_pred EEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCE
Q psy14130 245 VLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRI 324 (494)
Q Consensus 245 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 324 (494)
+|+.....++..+++|.+. ++.++.+|.+..-+++| .|+.+++||+-+++...... +. .....+.|+|.|.+
T Consensus 111 iw~~~~W~~~~slK~H~~~-Vt~lsiHPS~KLALsVg----~D~~lr~WNLV~Gr~a~v~~-L~--~~at~v~w~~~Gd~ 182 (362)
T KOG0294|consen 111 IWRVGSWELLKSLKAHKGQ-VTDLSIHPSGKLALSVG----GDQVLRTWNLVRGRVAFVLN-LK--NKATLVSWSPQGDH 182 (362)
T ss_pred EEEcCCeEEeeeecccccc-cceeEecCCCceEEEEc----CCceeeeehhhcCccceeec-cC--CcceeeEEcCCCCE
Confidence 9999999999999999998 99999999966667777 89999999998766544332 22 23344899999998
Q ss_pred EEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec-cceeEEEEeeC
Q psy14130 325 LFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ-CEIFRFFKLHT 385 (494)
Q Consensus 325 l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~-~~~~~~~~l~~ 385 (494)
+++.+ -..|-+|.+.+.+.+.. ...+..+.++.|.-.+.+++.+ ++.+++|+-+.
T Consensus 183 F~v~~--~~~i~i~q~d~A~v~~~----i~~~~r~l~~~~l~~~~L~vG~d~~~i~~~D~ds 238 (362)
T KOG0294|consen 183 FVVSG--RNKIDIYQLDNASVFRE----IENPKRILCATFLDGSELLVGGDNEWISLKDTDS 238 (362)
T ss_pred EEEEe--ccEEEEEecccHhHhhh----hhccccceeeeecCCceEEEecCCceEEEeccCC
Confidence 84443 45799999988765322 2223457888888777777775 88999998664
|
|
| >KOG1009|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.2e-17 Score=147.09 Aligned_cols=111 Identities=23% Similarity=0.308 Sum_probs=95.3
Q ss_pred eEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECC--------C--------CeEEEEecCCCCceEEEEEcCCCC
Q psy14130 169 IMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVG--------K--------GEALTVIDCHPDVINCLSFNRDGS 232 (494)
Q Consensus 169 ~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~--------~--------~~~~~~~~~h~~~v~~l~~~~~~~ 232 (494)
+..|..|...|+++.|+|+| .+||||+.+|.|.+|-.. + ......+.+|...|+.++|+|++.
T Consensus 58 ~s~Ls~H~~aVN~vRf~p~g-elLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~ 136 (434)
T KOG1009|consen 58 LSSLSRHTRAVNVVRFSPDG-ELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSN 136 (434)
T ss_pred eecccCCcceeEEEEEcCCc-CeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCc
Confidence 34566799999999999999 699999999999999875 2 123456678999999999999999
Q ss_pred EEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEE
Q psy14130 233 RLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTG 281 (494)
Q Consensus 233 ~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 281 (494)
++++++.|..+++||+..|..+..+..|... +..++|.|-+..+.+-+
T Consensus 137 ~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~y-vqgvawDpl~qyv~s~s 184 (434)
T KOG1009|consen 137 FLVSGSVDNSVRLWDVHAGQLLAILDDHEHY-VQGVAWDPLNQYVASKS 184 (434)
T ss_pred eeeeeeccceEEEEEeccceeEeeccccccc-cceeecchhhhhhhhhc
Confidence 9999999999999999999999999999887 88999988755444444
|
|
| >KOG1274|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=9.9e-17 Score=157.70 Aligned_cols=220 Identities=14% Similarity=0.122 Sum_probs=175.9
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.|++|+.....- +| ..+.-+...|.+++... +.|++|+.+++|.++.+..++.-..+....-++++++|+
T Consensus 35 g~ir~~~~~sd~e-----~P-~ti~~~g~~v~~ia~~s---~~f~~~s~~~tv~~y~fps~~~~~iL~Rftlp~r~~~v~ 105 (933)
T KOG1274|consen 35 GDIRKWKTNSDEE-----EP-ETIDISGELVSSIACYS---NHFLTGSEQNTVLRYKFPSGEEDTILARFTLPIRDLAVS 105 (933)
T ss_pred CceEEeecCCccc-----CC-chhhccCceeEEEeecc---cceEEeeccceEEEeeCCCCCccceeeeeeccceEEEEe
Confidence 3699999765521 12 12222778888887664 489999999999999998887655555566889999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD 308 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~ 308 (494)
.+|++++.||.|-.|++-++........+.+|... +.++.|.|. +.+|++. +-||.|++||+.++.....+....
T Consensus 106 g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~ap-Vl~l~~~p~-~~fLAvs---s~dG~v~iw~~~~~~~~~tl~~v~ 180 (933)
T KOG1274|consen 106 GSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAP-VLQLSYDPK-GNFLAVS---SCDGKVQIWDLQDGILSKTLTGVD 180 (933)
T ss_pred cCCcEEEeecCceeEEEEeccccchheeecccCCc-eeeeeEcCC-CCEEEEE---ecCceEEEEEcccchhhhhcccCC
Confidence 99999999999999999999999999999999998 999999999 5666666 689999999998765433332221
Q ss_pred ------CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEE
Q psy14130 309 ------SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRF 380 (494)
Q Consensus 309 ------~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~ 380 (494)
....+..++|+|++..+ +.-+.|+.|.+|+..+.+....+...+.+. .+..+.|+|.|.+++++ ++.+-+
T Consensus 181 k~n~~~~s~i~~~~aW~Pk~g~l-a~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss-~~~~~~wsPnG~YiAAs~~~g~I~v 258 (933)
T KOG1274|consen 181 KDNEFILSRICTRLAWHPKGGTL-AVPPVDNTVKVYSRKGWELQFKLRDKLSSS-KFSDLQWSPNGKYIAASTLDGQILV 258 (933)
T ss_pred ccccccccceeeeeeecCCCCeE-EeeccCCeEEEEccCCceeheeeccccccc-ceEEEEEcCCCcEEeeeccCCcEEE
Confidence 23446679999998888 555689999999999998876666555433 39999999999999987 899999
Q ss_pred EEee
Q psy14130 381 FKLH 384 (494)
Q Consensus 381 ~~l~ 384 (494)
|+..
T Consensus 259 Wnv~ 262 (933)
T KOG1274|consen 259 WNVD 262 (933)
T ss_pred Eecc
Confidence 9988
|
|
| >KOG1188|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.1e-17 Score=146.88 Aligned_cols=196 Identities=21% Similarity=0.252 Sum_probs=154.2
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcC--CCCEEEEEeCCCeEEEEeCCCCce--EEEeeecCCCCc
Q psy14130 190 NVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNR--DGSRLVTTCKDKTVRVLDPRTGLV--ISQGVCHPGTRS 265 (494)
Q Consensus 190 ~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~--~~~~l~s~~~d~~v~iwd~~~~~~--~~~~~~~~~~~~ 265 (494)
+.+|++-..|.|++||..+++.+..++++...+..+.|.. ....+.+|+.||+||+||+|.... +..+..+.+...
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f 120 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPF 120 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcc
Confidence 5678888899999999999999999999999999999987 466899999999999999998764 344455554423
Q ss_pred eEEEEECCCCeEEEEEecC-CCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCC
Q psy14130 266 SKAVFIGDTGRIVTTGFSR-HSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNER 344 (494)
Q Consensus 266 ~~~~~~~~~~~l~~~g~~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~ 344 (494)
.++.-.. .+.++++|..- ..+-.|.+||+|...+++....-.|...|+++.|+|....++++|+.||.|.+||+....
T Consensus 121 ~~ld~nc-k~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~ 199 (376)
T KOG1188|consen 121 ICLDLNC-KKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDN 199 (376)
T ss_pred eEeeccC-cCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCCc
Confidence 4444333 37888888211 246789999999877755544446788999999999998888999999999999998764
Q ss_pred ceEEecccccCCCCeeEEEEecCC--c-eeeeccceeEEEEeeCC
Q psy14130 345 PYIHFLNQSLSGAPQRGLGFMPKR--G-CDVTQCEIFRFFKLHTT 386 (494)
Q Consensus 345 ~~~~~~~~~~~~~~v~~~~~~p~~--~-~~~~~~~~~~~~~l~~~ 386 (494)
.--.++..+.+...|..+.|+.++ . +.++-.+...+|+++.+
T Consensus 200 EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~ 244 (376)
T KOG1188|consen 200 EEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDG 244 (376)
T ss_pred chhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCC
Confidence 433445556667889999999876 3 44556999999999884
|
|
| >KOG0644|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.2e-18 Score=166.04 Aligned_cols=209 Identities=15% Similarity=0.208 Sum_probs=149.6
Q ss_pred cceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEE
Q psy14130 167 EWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVL 246 (494)
Q Consensus 167 ~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iw 246 (494)
.++..+.||.+.|+.++.+.+. .+++++|.|..|++|-+.++.++..+.+|++.|++++|+|-. +.+.||++++|
T Consensus 223 ~~lAs~rGhs~ditdlavs~~n-~~iaaaS~D~vIrvWrl~~~~pvsvLrghtgavtaiafsP~~----sss~dgt~~~w 297 (1113)
T KOG0644|consen 223 RCLASCRGHSGDITDLAVSSNN-TMIAAASNDKVIRVWRLPDGAPVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRIW 297 (1113)
T ss_pred hhhccCCCCccccchhccchhh-hhhhhcccCceEEEEecCCCchHHHHhccccceeeeccCccc----cCCCCCceEec
Confidence 5556778899999999999886 799999999999999999999999999999999999999954 78899999999
Q ss_pred eCCCCc--------------eEEEeeec----------C-----CCCceEEEEECCCCeEEEEEec--------CCCCce
Q psy14130 247 DPRTGL--------------VISQGVCH----------P-----GTRSSKAVFIGDTGRIVTTGFS--------RHSDRQ 289 (494)
Q Consensus 247 d~~~~~--------------~~~~~~~~----------~-----~~~~~~~~~~~~~~~l~~~g~~--------~~~d~~ 289 (494)
|.+-.- .+..+... . ....-.++|... ..+++++-+ .-.+-.
T Consensus 298 d~r~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs~d~ea~n~e~~~l~~~~~-~lif~t~ssd~~~~~~~ar~~~~ 376 (1113)
T KOG0644|consen 298 DARLEPRIYVPRPLKFTEKDLVDSILFENNGDRFLTGSRDGEARNHEFEQLAWRSN-LLIFVTRSSDLSSIVVTARNDHR 376 (1113)
T ss_pred cccccccccCCCCCCcccccceeeeeccccccccccccCCcccccchhhHhhhhcc-ceEEEeccccccccceeeeeeeE
Confidence 987110 00000000 0 000111112111 223333310 023556
Q ss_pred EEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCc
Q psy14130 290 VGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRG 369 (494)
Q Consensus 290 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ 369 (494)
+.+|++.++...... ..+...+..+.++|-...+..+++.||.+.|||+-.|.++..+... ...+..-+|+++|.
T Consensus 377 ~~vwnl~~g~l~H~l--~ghsd~~yvLd~Hpfn~ri~msag~dgst~iwdi~eg~pik~y~~g---h~kl~d~kFSqdgt 451 (1113)
T KOG0644|consen 377 LCVWNLYTGQLLHNL--MGHSDEVYVLDVHPFNPRIAMSAGYDGSTIIWDIWEGIPIKHYFIG---HGKLVDGKFSQDGT 451 (1113)
T ss_pred eeeeecccchhhhhh--cccccceeeeeecCCCcHhhhhccCCCceEeeecccCCcceeeecc---cceeeccccCCCCc
Confidence 778887765432222 2355678888999988888889999999999999999887665522 34566778999999
Q ss_pred eeeeccceeEEEEeeCC
Q psy14130 370 CDVTQCEIFRFFKLHTT 386 (494)
Q Consensus 370 ~~~~~~~~~~~~~l~~~ 386 (494)
.++..|....++-+.++
T Consensus 452 s~~lsd~hgql~i~g~g 468 (1113)
T KOG0644|consen 452 SIALSDDHGQLYILGTG 468 (1113)
T ss_pred eEecCCCCCceEEeccC
Confidence 99999888888877764
|
|
| >KOG1007|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.4e-16 Score=136.82 Aligned_cols=214 Identities=20% Similarity=0.292 Sum_probs=160.4
Q ss_pred CccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCCCC--cccceEecc-cccccEEEEEEcCCCCCEEE
Q psy14130 117 NAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLSGN--LNEWIMDLH-GHKRRVGYIEWHPTAENVVA 193 (494)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~~~--~~~~~~~~~-~h~~~V~~~~~~p~~~~~l~ 193 (494)
..|+...+++++..++.++...++..++ ..+-||.+++.....+ ..+.+..|. .+-+.|.|+.|.|++ ..++
T Consensus 65 Evw~las~P~d~~ilaT~yn~~s~s~vl----~~aaiw~ipe~~~~S~~~tlE~v~~Ldteavg~i~cvew~Pns-~kla 139 (370)
T KOG1007|consen 65 EVWDLASSPFDQRILATVYNDTSDSGVL----TGAAIWQIPEPLGQSNSSTLECVASLDTEAVGKINCVEWEPNS-DKLA 139 (370)
T ss_pred ceehhhcCCCCCceEEEEEeccCCCcce----eeEEEEecccccCccccchhhHhhcCCHHHhCceeeEEEcCCC-CeeE
Confidence 3477888888888888887643332111 2478999987633211 113334443 456689999999998 4666
Q ss_pred EEeCCCeEEEEECCCCeE-EEEec-----CCCCceEEEEEcC--CCCEEEEEeCCCeEEEEeCCCCceEEEee-ecCCCC
Q psy14130 194 SAGFDYLIILWDVGKGEA-LTVID-----CHPDVINCLSFNR--DGSRLVTTCKDKTVRVLDPRTGLVISQGV-CHPGTR 264 (494)
Q Consensus 194 s~s~d~~v~iwd~~~~~~-~~~~~-----~h~~~v~~l~~~~--~~~~l~s~~~d~~v~iwd~~~~~~~~~~~-~~~~~~ 264 (494)
+-. |..|.+|++..+.. +..+. +|....++-+|+| +|+.+++. .|++++.||+|+.+....+. +|...
T Consensus 140 sm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt-~d~tl~~~D~RT~~~~~sI~dAHgq~- 216 (370)
T KOG1007|consen 140 SMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATT-SDSTLQFWDLRTMKKNNSIEDAHGQR- 216 (370)
T ss_pred Eec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEe-CCCcEEEEEccchhhhcchhhhhcce-
Confidence 554 88999999987765 33332 3567788999999 78777766 47899999999988666654 45444
Q ss_pred ceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeC
Q psy14130 265 SSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTN 342 (494)
Q Consensus 265 ~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~ 342 (494)
+..+.|+|+...+++++ +.||.|+|||.|+.+.|+.. ..+|...|.++.|+|.-..|+++|+.|..|.+|....
T Consensus 217 vrdlDfNpnkq~~lvt~---gDdgyvriWD~R~tk~pv~e-l~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~s 290 (370)
T KOG1007|consen 217 VRDLDFNPNKQHILVTC---GDDGYVRIWDTRKTKFPVQE-LPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCASS 290 (370)
T ss_pred eeeccCCCCceEEEEEc---CCCccEEEEeccCCCccccc-cCCCceEEEEEEecCccceEEEecCCCceeEEEeccc
Confidence 88999999988899988 89999999999987776553 3457788999999999888889999999999998753
|
|
| >KOG0322|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.7e-17 Score=138.63 Aligned_cols=285 Identities=14% Similarity=0.148 Sum_probs=172.4
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeeccccccccc----Cccc--ccccccceeecCCceEEEEEEEecC
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDN----VPIT--RNAHDSHFCAANPKFVAVVTEVAGG 76 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (494)
|+|.+.|+++.|.. ++ +|++|..-|.|. +|...+.+..+... ..+. +...+..++....+...+.|....+
T Consensus 11 Rp~~~~v~s~~fqa-~~-rL~sg~~~G~V~-~w~lqt~r~~~~~r~~g~~~it~lq~~p~d~l~tqgRd~~L~lw~ia~s 87 (323)
T KOG0322|consen 11 RPHSSSVTSVLFQA-NE-RLMSGLSVGIVK-MWVLQTERDLPLIRLFGRLFITNLQSIPNDSLDTQGRDPLLILWTIAYS 87 (323)
T ss_pred ccccchheehhhcc-ch-hhhcccccceEE-EEEeecCccchhhhhhccceeeceeecCCcchhhcCCCceEEEEEccCc
Confidence 69999999999998 55 699999999998 88887766544222 1111 1111233444556666777776554
Q ss_pred ceEEEEeccccccccCCCCceeecccCCccceeeceeccCCccCCCeeee----CCceE-EEEEeecCCcEEEEEEcCcE
Q psy14130 77 GAFLVLPIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAA----NPKFV-AVVTEVAGGGAFLVLPIHRV 151 (494)
Q Consensus 77 g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~g~~~~~~~~~v 151 (494)
..+.+-.+-. ....||.+ +++.. -.....+.+. ..+
T Consensus 88 ~~i~i~Si~~--------------------------------nslgFCrfSl~~~~k~~eqll~yp~rgs-------de~ 128 (323)
T KOG0322|consen 88 AFISIHSIVV--------------------------------NSLGFCRFSLVKKPKNSEQLLEYPSRGS-------DET 128 (323)
T ss_pred ceEEEeeeec--------------------------------cccccccceeccCCCcchhheecCCccc-------chh
Confidence 3333311110 11111111 01100 0000000000 011
Q ss_pred EEEEcCCCCCCCCcccceEecccccccEEEEEEcCC-CC-CEEEEEeCCCeEEEEECCCCeEEE----------EecCCC
Q psy14130 152 KLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPT-AE-NVVASAGFDYLIILWDVGKGEALT----------VIDCHP 219 (494)
Q Consensus 152 ~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~-~~-~~l~s~s~d~~v~iwd~~~~~~~~----------~~~~h~ 219 (494)
++-|........ .+-..-.+..+.|.|..+..+ +. -+|++|-++|.+.+||+.++..+. ....|.
T Consensus 129 h~~D~g~~tqv~---i~dd~~~~Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~ 205 (323)
T KOG0322|consen 129 HKQDGGDTTQVQ---IADDSERSKLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHK 205 (323)
T ss_pred hhhccCccceeE---ccCchhccccCceeeeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhcc
Confidence 111111110000 000011234567777775433 22 357778889999999999874332 334699
Q ss_pred CceEEEEEcCCCCEEEEEeCCCeEEEEeCCCC--c-eE-EEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeC
Q psy14130 220 DVINCLSFNRDGSRLVTTCKDKTVRVLDPRTG--L-VI-SQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDE 295 (494)
Q Consensus 220 ~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~--~-~~-~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~ 295 (494)
.+|.++.|.+.-..=++|+.+..+..|.+... . .+ .+..... ..+..+..-|| +++++++ +.|+.||||.-
T Consensus 206 qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~~e~~lkn-pGv~gvrIRpD-~KIlATA---GWD~RiRVysw 280 (323)
T KOG0322|consen 206 QPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQIRKEITLKN-PGVSGVRIRPD-GKILATA---GWDHRIRVYSW 280 (323)
T ss_pred CcceeeeechhhcCCcCCCccccceeeeeccccCcccccceEEecC-CCccceEEccC-CcEEeec---ccCCcEEEEEe
Confidence 99999999987666788898999999988644 2 11 1222222 22677777788 6777777 69999999999
Q ss_pred CCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEe
Q psy14130 296 NDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYEL 340 (494)
Q Consensus 296 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~ 340 (494)
++......+.. |..+|.+++|+|+.+.+ ++++.|+.|.+|++
T Consensus 281 rtl~pLAVLky--Hsagvn~vAfspd~~lm-AaaskD~rISLWkL 322 (323)
T KOG0322|consen 281 RTLNPLAVLKY--HSAGVNAVAFSPDCELM-AAASKDARISLWKL 322 (323)
T ss_pred ccCCchhhhhh--hhcceeEEEeCCCCchh-hhccCCceEEeeec
Confidence 98765444332 66899999999998888 99999999999986
|
|
| >KOG2445|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.7e-16 Score=134.83 Aligned_cols=207 Identities=14% Similarity=0.242 Sum_probs=149.1
Q ss_pred ccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC----eEEEEecCCCCceEEEEEcC--CCCEEEEEeCCCeEEEE
Q psy14130 173 HGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKG----EALTVIDCHPDVINCLSFNR--DGSRLVTTCKDKTVRVL 246 (494)
Q Consensus 173 ~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~----~~~~~~~~h~~~v~~l~~~~--~~~~l~s~~~d~~v~iw 246 (494)
.+|.+-|.++.|.+-| +.+|+|+.|++|+|||.+.. .+....+.|.+.|..+.|.+ -|+.+|++|.|+++.||
T Consensus 10 s~h~DlihdVs~D~~G-RRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iW 88 (361)
T KOG2445|consen 10 SGHKDLIHDVSFDFYG-RRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIW 88 (361)
T ss_pred cCCcceeeeeeecccC-ceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeee
Confidence 4689999999999999 79999999999999997543 35667889999999999987 48999999999999999
Q ss_pred eCCC---------CceEEEeeecCCCCceEEEEECCC-CeEEEEEecCCCCceEEEEeCCCCCCceeE---eee------
Q psy14130 247 DPRT---------GLVISQGVCHPGTRSSKAVFIGDT-GRIVTTGFSRHSDRQVGLWDENDLNTPLAL---ETV------ 307 (494)
Q Consensus 247 d~~~---------~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~---~~~------ 307 (494)
.-.. .....++....+. +..+.|.|.. +..+++. +.||.+|||+.-+....... ..+
T Consensus 89 EE~~~~~~~~~~~Wv~~ttl~Dsrss-V~DV~FaP~hlGLklA~~---~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~p 164 (361)
T KOG2445|consen 89 EEQEKSEEAHGRRWVRRTTLVDSRSS-VTDVKFAPKHLGLKLAAA---SADGILRIYEAPDPMNLSQWTLQHEIQNVIDP 164 (361)
T ss_pred eecccccccccceeEEEEEeecCCcc-eeEEEecchhcceEEEEe---ccCcEEEEEecCCccccccchhhhhhhhccCC
Confidence 7521 1133444444454 8999998863 4556666 69999999996543221110 011
Q ss_pred --cCCCceEEeEEeCCC--CEEEEEEeCC-----CcEEEEEeeCCC-ceEEecccccCCCCeeEEEEecCCc----eeee
Q psy14130 308 --DSSSGVLFPYYDHDT--RILFLAGKGD-----GNIRYYELTNER-PYIHFLNQSLSGAPQRGLGFMPKRG----CDVT 373 (494)
Q Consensus 308 --~~~~~v~~~~~~~~~--~~l~~~g~~d-----g~i~~wd~~~~~-~~~~~~~~~~~~~~v~~~~~~p~~~----~~~~ 373 (494)
.+.....|+.|+|.. +.+++.|+.+ +.+.||...... .......-..++.+|+.++|.|.-. +++.
T Consensus 165 p~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAv 244 (361)
T KOG2445|consen 165 PGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAV 244 (361)
T ss_pred cccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEE
Confidence 134566788888743 3344777655 479999987654 3333333345689999999999643 4454
Q ss_pred c--cceeEEEEeeC
Q psy14130 374 Q--CEIFRFFKLHT 385 (494)
Q Consensus 374 ~--~~~~~~~~l~~ 385 (494)
+ || ++||++..
T Consensus 245 A~kDg-v~I~~v~~ 257 (361)
T KOG2445|consen 245 ATKDG-VRIFKVKV 257 (361)
T ss_pred eecCc-EEEEEEee
Confidence 4 55 99999987
|
|
| >KOG0290|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.1e-17 Score=139.64 Aligned_cols=218 Identities=14% Similarity=0.129 Sum_probs=161.0
Q ss_pred EEEEcCcEEEEEcCCCCCCCCcccceE-----ecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe---EEEEe
Q psy14130 144 LVLPIHRVKLWYIPDGGLSGNLNEWIM-----DLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE---ALTVI 215 (494)
Q Consensus 144 ~~~~~~~v~iw~~~~~~~~~~~~~~~~-----~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~---~~~~~ 215 (494)
+++..+.++||.+....... .+.. .-..+..++++..|+....+++.++|-|-+..|||++++. ....+
T Consensus 116 LATs~D~LRlWri~~ee~~~---~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQL 192 (364)
T KOG0290|consen 116 LATSSDFLRLWRIGDEESRV---ELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQL 192 (364)
T ss_pred hhcccCeEEEEeccCcCCce---ehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEE
Confidence 33333469999998532111 1111 1234678899999999888999999999999999999874 35667
Q ss_pred cCCCCceEEEEEcCCCC-EEEEEeCCCeEEEEeCCCCceEEEe-eecC-CCCceEEEEECCCCeEEEEEecCCCCceEEE
Q psy14130 216 DCHPDVINCLSFNRDGS-RLVTTCKDKTVRVLDPRTGLVISQG-VCHP-GTRSSKAVFIGDTGRIVTTGFSRHSDRQVGL 292 (494)
Q Consensus 216 ~~h~~~v~~l~~~~~~~-~l~s~~~d~~v~iwd~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~i 292 (494)
-.|...|..++|..++. .+++.+.||.+|+||+|.-+....+ .... .....+++|++.+.+++++-. .....|.|
T Consensus 193 IAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~--~dS~~V~i 270 (364)
T KOG0290|consen 193 IAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFA--MDSNKVVI 270 (364)
T ss_pred EecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhh--cCCceEEE
Confidence 78999999999998554 8899999999999999976622222 2222 233789999998877776631 45667999
Q ss_pred EeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCC--ceEEecccccCCCCeeEEEEecC
Q psy14130 293 WDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNER--PYIHFLNQSLSGAPQRGLGFMPK 367 (494)
Q Consensus 293 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~--~~~~~~~~~~~~~~v~~~~~~p~ 367 (494)
.|+|....+.... ..|...|..++|.|....-+++++.|..+.+||+...- .....+..+..++.|..+.|+|.
T Consensus 271 LDiR~P~tpva~L-~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dPilay~a~~EVNqi~Ws~~ 346 (364)
T KOG0290|consen 271 LDIRVPCTPVARL-RNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDPILAYTAGGEVNQIQWSSS 346 (364)
T ss_pred EEecCCCcceehh-hcCcccccceEecCCCCceeeecCCcceEEEEecccccccCCCCchhhhhccceeeeeeeccc
Confidence 9999876665432 35778999999999887776999999999999997532 22333444556788999999964
|
|
| >KOG0642|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.4e-17 Score=155.31 Aligned_cols=210 Identities=15% Similarity=0.135 Sum_probs=149.5
Q ss_pred cceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC----------eEEEEecCCCCceEEEEEcCCCCEEEE
Q psy14130 167 EWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKG----------EALTVIDCHPDVINCLSFNRDGSRLVT 236 (494)
Q Consensus 167 ~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~----------~~~~~~~~h~~~v~~l~~~~~~~~l~s 236 (494)
+++.++++|.++|.|++..+++ ..+++|+.||+|+.|++-.. .....+.||.+.|+.+++++....|++
T Consensus 335 epi~tfraH~gPVl~v~v~~n~-~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Lls 413 (577)
T KOG0642|consen 335 EPILTFRAHEGPVLCVVVPSNG-EHCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLS 413 (577)
T ss_pred eeeEEEecccCceEEEEecCCc-eEEEeeccCceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceee
Confidence 5667888999999999999998 69999999999999965321 134567899999999999999999999
Q ss_pred EeCCCeEEEEeCCCCceEEEeeec-CCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee--c---CC
Q psy14130 237 TCKDKTVRVLDPRTGLVISQGVCH-PGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV--D---SS 310 (494)
Q Consensus 237 ~~~d~~v~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~--~---~~ 310 (494)
++.||++++|+.....+ .++... .......+.+......+..+.| .-+.--++++........+... . ..
T Consensus 414 cs~DgTvr~w~~~~~~~-~~f~~~~e~g~Plsvd~~ss~~a~~~~s~---~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~ 489 (577)
T KOG0642|consen 414 CSSDGTVRLWEPTEESP-CTFGEPKEHGYPLSVDRTSSRPAHSLASF---RFGYTSIDDMEVVSDLLIFESSASPGPRRY 489 (577)
T ss_pred ecCCceEEeeccCCcCc-cccCCccccCCcceEeeccchhHhhhhhc---ccccccchhhhhhhheeeccccCCCccccc
Confidence 99999999999887665 222211 1112455555444322333221 2333333343332221111111 1 11
Q ss_pred CceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 311 SGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 311 ~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
..+..+.+.|..... .++..|+.|+++|..+++++..... +...++++++.|+|.+++++ |+.+++|++..
T Consensus 490 ~~in~vVs~~~~~~~-~~~hed~~Ir~~dn~~~~~l~s~~a---~~~svtslai~~ng~~l~s~s~d~sv~l~kld~ 562 (577)
T KOG0642|consen 490 PQINKVVSHPTADIT-FTAHEDRSIRFFDNKTGKILHSMVA---HKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDV 562 (577)
T ss_pred CccceEEecCCCCee-EecccCCceecccccccccchheee---ccceecceeecCCCceEEeecCCceeehhhccc
Confidence 346677888888777 7888999999999999988644433 35779999999999999886 99999999876
|
|
| >COG2319 FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.75 E-value=8.2e-15 Score=144.65 Aligned_cols=219 Identities=27% Similarity=0.464 Sum_probs=169.3
Q ss_pred cEEEEEcCC-CCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeC-CCeEEEEECCCCeEEEEecCCCCceEEEEE
Q psy14130 150 RVKLWYIPD-GGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGF-DYLIILWDVGKGEALTVIDCHPDVINCLSF 227 (494)
Q Consensus 150 ~v~iw~~~~-~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~-d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~ 227 (494)
.+.+|+... . .....+.+|...|.+++|+|++ ..+++++. |+.+++|++..+..+..+.+|...|.+++|
T Consensus 135 ~~~~~~~~~~~-------~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 206 (466)
T COG2319 135 TVKLWDLSTPG-------KLIRTLEGHSESVTSLAFSPDG-KLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAF 206 (466)
T ss_pred cEEEEEecCCC-------eEEEEEecCcccEEEEEECCCC-CEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEE
Confidence 699999987 4 5567788899999999999998 58888885 999999999988889999999999999999
Q ss_pred cCCCC-EEEEEeCCCeEEEEeCCCCceEE-EeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEe
Q psy14130 228 NRDGS-RLVTTCKDKTVRVLDPRTGLVIS-QGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALE 305 (494)
Q Consensus 228 ~~~~~-~l~s~~~d~~v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~ 305 (494)
+|++. .+++++.|+.|++||...+..+. .+..|... . ...|.+++ .+++++ +.|+.+++||++.........
T Consensus 207 ~~~~~~~~~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~-~-~~~~~~~~-~~~~~~---~~d~~~~~~~~~~~~~~~~~~ 280 (466)
T COG2319 207 SPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDS-V-VSSFSPDG-SLLASG---SSDGTIRLWDLRSSSSLLRTL 280 (466)
T ss_pred cCCcceEEEEecCCCcEEEEECCCCcEEeeecCCCCcc-e-eEeECCCC-CEEEEe---cCCCcEEEeeecCCCcEEEEE
Confidence 99998 56666999999999999888777 68888776 3 23788885 555566 699999999998755522222
Q ss_pred eecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecC-Cceeee--ccceeEEEE
Q psy14130 306 TVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPK-RGCDVT--QCEIFRFFK 382 (494)
Q Consensus 306 ~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~-~~~~~~--~~~~~~~~~ 382 (494)
..+...+.++.|+|++..+ ++++.|+.+.+||..+........ ...+...+..+.|.++ ..+... .++.+++|+
T Consensus 281 -~~~~~~v~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 357 (466)
T COG2319 281 -SGHSSSVLSVAFSPDGKLL-ASGSSDGTVRLWDLETGKLLSSLT-LKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWD 357 (466)
T ss_pred -ecCCccEEEEEECCCCCEE-EEeeCCCcEEEEEcCCCceEEEee-ecccCCceEEEEECCCCCEEEEeecCCCcEEeee
Confidence 3456789999999988888 448888999999888876533332 1223446899999333 123333 367788888
Q ss_pred eeC
Q psy14130 383 LHT 385 (494)
Q Consensus 383 l~~ 385 (494)
+..
T Consensus 358 ~~~ 360 (466)
T COG2319 358 LRT 360 (466)
T ss_pred cCC
Confidence 877
|
|
| >KOG2919|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.1e-16 Score=136.06 Aligned_cols=248 Identities=20% Similarity=0.294 Sum_probs=169.9
Q ss_pred CeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCCCCcc-----cceEecc-cccccEEEEEEc-------CCC
Q psy14130 122 HFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLSGNLN-----EWIMDLH-GHKRRVGYIEWH-------PTA 188 (494)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~~~~~-----~~~~~~~-~h~~~V~~~~~~-------p~~ 188 (494)
.-|.|+|+..++..... ++.+.+|+++......... ....+++ .....|...+|- |+.
T Consensus 53 kgckWSPDGSciL~~se---------dn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t 123 (406)
T KOG2919|consen 53 KGCKWSPDGSCILSLSE---------DNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPST 123 (406)
T ss_pred ccceeCCCCceEEeecc---------cCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCcc
Confidence 34566666554444333 3468999987643222100 0111111 133567777773 565
Q ss_pred CCEEEEEeCCCeEEEEECCCCeEEEEecC--CCC---ceEEEEEcCCCCEEEEEeCCCeEEEEeC-CCCc--eEEEeeec
Q psy14130 189 ENVVASAGFDYLIILWDVGKGEALTVIDC--HPD---VINCLSFNRDGSRLVTTCKDKTVRVLDP-RTGL--VISQGVCH 260 (494)
Q Consensus 189 ~~~l~s~s~d~~v~iwd~~~~~~~~~~~~--h~~---~v~~l~~~~~~~~l~s~~~d~~v~iwd~-~~~~--~~~~~~~~ 260 (494)
+++|+.+.|.-|.+||.-+|+...++.+ |.+ ...+++|+|||.+|+.|- .+.|++||+ |.|+ .+.....+
T Consensus 124 -~l~a~ssr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGy-krcirvFdt~RpGr~c~vy~t~~~ 201 (406)
T KOG2919|consen 124 -NLFAVSSRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGY-KRCIRVFDTSRPGRDCPVYTTVTK 201 (406)
T ss_pred -ceeeeccccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeecc-cceEEEeeccCCCCCCcchhhhhc
Confidence 7899999999999999999998777654 333 346899999999998765 568999999 6665 22222222
Q ss_pred ----CCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEE
Q psy14130 261 ----PGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIR 336 (494)
Q Consensus 261 ----~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~ 336 (494)
....+.+++|+|.+...+++| +-...+-||.-... .|+.+. .++.++|+.+.|.++|+.||.-+-.|-.|.
T Consensus 202 ~k~gq~giisc~a~sP~~~~~~a~g---sY~q~~giy~~~~~-~pl~ll-ggh~gGvThL~~~edGn~lfsGaRk~dkIl 276 (406)
T KOG2919|consen 202 GKFGQKGIISCFAFSPMDSKTLAVG---SYGQRVGIYNDDGR-RPLQLL-GGHGGGVTHLQWCEDGNKLFSGARKDDKIL 276 (406)
T ss_pred ccccccceeeeeeccCCCCcceeee---cccceeeeEecCCC-Cceeee-cccCCCeeeEEeccCcCeecccccCCCeEE
Confidence 223378899999988899999 67777888776553 344333 367899999999999999966556688999
Q ss_pred EEEeeCCCceEEecccccC-CCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 337 YYELTNERPYIHFLNQSLS-GAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 337 ~wd~~~~~~~~~~~~~~~~-~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
.||++..+.....+..+.. .+.-.-+...|++..++++ ++.+++|++..
T Consensus 277 ~WDiR~~~~pv~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~ 328 (406)
T KOG2919|consen 277 CWDIRYSRDPVYALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKD 328 (406)
T ss_pred EEeehhccchhhhhhhhccCccceEEEecCCCCceeeccCCCccEEEEecCC
Confidence 9999976543333444332 3333445567999999997 89999999887
|
|
| >KOG0307|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.4e-17 Score=167.47 Aligned_cols=211 Identities=20% Similarity=0.363 Sum_probs=163.9
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 82 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~ 82 (494)
+-|.++|..+.|++..+++||+|+.||.|- +|+...... +. ...
T Consensus 113 ~~h~G~V~gLDfN~~q~nlLASGa~~geI~-iWDlnn~~t------P~--~~~--------------------------- 156 (1049)
T KOG0307|consen 113 SKHTGPVLGLDFNPFQGNLLASGADDGEIL-IWDLNKPET------PF--TPG--------------------------- 156 (1049)
T ss_pred cccCCceeeeeccccCCceeeccCCCCcEE-EeccCCcCC------CC--CCC---------------------------
Confidence 469999999999998888999999999997 888643211 00 000
Q ss_pred eccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCC
Q psy14130 83 PIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLS 162 (494)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~ 162 (494)
-.....++..+.||-+...+..+++..| ++.|||++..
T Consensus 157 -------------------------------~~~~~~eI~~lsWNrkvqhILAS~s~sg--------~~~iWDlr~~--- 194 (1049)
T KOG0307|consen 157 -------------------------------SQAPPSEIKCLSWNRKVSHILASGSPSG--------RAVIWDLRKK--- 194 (1049)
T ss_pred -------------------------------CCCCcccceEeccchhhhHHhhccCCCC--------CceeccccCC---
Confidence 0011245555666666555555555544 6899999988
Q ss_pred CCcccceEecccccc--cEEEEEEcCCCCCEEEEEeCCC---eEEEEECCCC-eEEEEecCCCCceEEEEEcCCC-CEEE
Q psy14130 163 GNLNEWIMDLHGHKR--RVGYIEWHPTAENVVASAGFDY---LIILWDVGKG-EALTVIDCHPDVINCLSFNRDG-SRLV 235 (494)
Q Consensus 163 ~~~~~~~~~~~~h~~--~V~~~~~~p~~~~~l~s~s~d~---~v~iwd~~~~-~~~~~~~~h~~~v~~l~~~~~~-~~l~ 235 (494)
+++..+..|.. .+..++|||++.+.|++++.|. .|.+||++.. .+++++++|...|.++.|++.+ ++|+
T Consensus 195 ----~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lll 270 (1049)
T KOG0307|consen 195 ----KPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLL 270 (1049)
T ss_pred ----CcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhh
Confidence 44445544443 4788999999888888888764 7999998754 5788889999999999999955 8999
Q ss_pred EEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCC
Q psy14130 236 TTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLN 299 (494)
Q Consensus 236 s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~ 299 (494)
|+++|++|.+|+.++++.+.++....+. +..+.|+|....++++. +-||.|.||.+....
T Consensus 271 SsgkD~~ii~wN~~tgEvl~~~p~~~nW-~fdv~w~pr~P~~~A~a---sfdgkI~I~sl~~~~ 330 (1049)
T KOG0307|consen 271 SSGKDNRIICWNPNTGEVLGELPAQGNW-CFDVQWCPRNPSVMAAA---SFDGKISIYSLQGTD 330 (1049)
T ss_pred cccCCCCeeEecCCCceEeeecCCCCcc-eeeeeecCCCcchhhhh---eeccceeeeeeecCC
Confidence 9999999999999999999999886555 88999999988888888 789999999987654
|
|
| >KOG4227|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.2e-16 Score=139.91 Aligned_cols=206 Identities=11% Similarity=0.129 Sum_probs=153.7
Q ss_pred ccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecC--CCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc
Q psy14130 175 HKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDC--HPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGL 252 (494)
Q Consensus 175 h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~--h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~ 252 (494)
|...|.|++|+... ..+++|..+++|.+.|+++.+.+..+.. ..+.|+.+..+|-.+.|++.+.++.|.+||.+...
T Consensus 104 H~SNIF~L~F~~~N-~~~~SG~~~~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~ 182 (609)
T KOG4227|consen 104 HRSNIFSLEFDLEN-RFLYSGERWGTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQ 182 (609)
T ss_pred cccceEEEEEccCC-eeEecCCCcceeEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCC
Confidence 67899999999886 7999999999999999999998887762 23589999999999999999999999999998765
Q ss_pred -eE-EEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEee----ecC-CCceEEeEEeCCCCEE
Q psy14130 253 -VI-SQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALET----VDS-SSGVLFPYYDHDTRIL 325 (494)
Q Consensus 253 -~~-~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~----~~~-~~~v~~~~~~~~~~~l 325 (494)
.. ..+.+..+.....+.|+|....|+++. +..+-+.+||++....++.... +.. ........|+|.|..+
T Consensus 183 ~~~~~~~~AN~~~~F~t~~F~P~~P~Li~~~---~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~ 259 (609)
T KOG4227|consen 183 NPISLVLPANSGKNFYTAEFHPETPALILVN---SETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQF 259 (609)
T ss_pred CCCceeeecCCCccceeeeecCCCceeEEec---cccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCee
Confidence 22 223344444578899999999999998 7888899999987655443221 111 2344678999999998
Q ss_pred EEEEeCCCcEEEEEeeCCCceEEecc----cccCCCCeeEEEEecCCceeeec-cceeEEEEeeC
Q psy14130 326 FLAGKGDGNIRYYELTNERPYIHFLN----QSLSGAPQRGLGFMPKRGCDVTQ-CEIFRFFKLHT 385 (494)
Q Consensus 326 ~~~g~~dg~i~~wd~~~~~~~~~~~~----~~~~~~~v~~~~~~p~~~~~~~~-~~~~~~~~l~~ 385 (494)
++--...--.+||+-+.++..-... .+.....+.+++|.-|..++..+ +-.+.+|++-.
T Consensus 260 -msiRR~~~P~~~D~~S~R~~V~k~D~N~~GY~N~~T~KS~~F~~D~~v~tGSD~~~i~~WklP~ 323 (609)
T KOG4227|consen 260 -MSIRRGKCPLYFDFISQRCFVLKSDHNPNGYCNIKTIKSMTFIDDYTVATGSDHWGIHIWKLPR 323 (609)
T ss_pred -hhhhccCCCEEeeeecccceeEeccCCCCcceeeeeeeeeeeecceeeeccCcccceEEEecCC
Confidence 5444444456789888665322222 22334568899999887743333 56789999865
|
|
| >KOG2048|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.9e-15 Score=141.35 Aligned_cols=250 Identities=14% Similarity=0.212 Sum_probs=178.4
Q ss_pred CCeeeeCCceEEEEEeecCCcEEEEE-EcCcEEEEEcCCCCCCCCcccceEecccc-cccEEEEEEcCCCCCEEEEEeCC
Q psy14130 121 SHFCAANPKFVAVVTEVAGGGAFLVL-PIHRVKLWYIPDGGLSGNLNEWIMDLHGH-KRRVGYIEWHPTAENVVASAGFD 198 (494)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~v~iw~~~~~~~~~~~~~~~~~~~~h-~~~V~~~~~~p~~~~~l~s~s~d 198 (494)
+.+..+.|..+.....+...+.+++. ..+.|.||++..+- -....+.|+ .+.|.+++|.+.+ .|+|.+.+
T Consensus 18 crf~d~~Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w------~~~~vi~g~~drsIE~L~W~e~~--RLFS~g~s 89 (691)
T KOG2048|consen 18 CRFVDYKPSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNW------FLEPVIHGPEDRSIESLAWAEGG--RLFSSGLS 89 (691)
T ss_pred EEEEeeeccceEEEEEeccCCceeeeccCCcEEEEccCCCc------eeeEEEecCCCCceeeEEEccCC--eEEeecCC
Confidence 33444444433333333333444443 45679999998763 223344444 5679999999664 79999999
Q ss_pred CeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEee-ecCCCCceEEEEECCCCeE
Q psy14130 199 YLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGV-CHPGTRSSKAVFIGDTGRI 277 (494)
Q Consensus 199 ~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l 277 (494)
|.|.-||+.+++++..++...+.|++++.+|.+..++.||.||.+..++...++...... .....++.++.|.++ +.-
T Consensus 90 g~i~EwDl~~lk~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~-~~~ 168 (691)
T KOG2048|consen 90 GSITEWDLHTLKQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPT-GTK 168 (691)
T ss_pred ceEEEEecccCceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCC-ccE
Confidence 999999999999999999999999999999999999999999988888888877554432 223355999999998 555
Q ss_pred EEEEecCCCCceEEEEeCCCCCCceeEe-eecC-----CCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecc
Q psy14130 278 VTTGFSRHSDRQVGLWDENDLNTPLALE-TVDS-----SSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLN 351 (494)
Q Consensus 278 ~~~g~~~~~d~~i~iwd~~~~~~~~~~~-~~~~-----~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~ 351 (494)
+++| +.||.|++||..++....... ..+. ..-|.++.|-.++ .| ++|..-|+|.+||...+.....+.
T Consensus 169 i~~G---s~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~-tI-~sgDS~G~V~FWd~~~gTLiqS~~- 242 (691)
T KOG2048|consen 169 IAGG---SIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDS-TI-ASGDSAGTVTFWDSIFGTLIQSHS- 242 (691)
T ss_pred EEec---ccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeecC-cE-EEecCCceEEEEcccCcchhhhhh-
Confidence 6667 699999999998765543111 1111 1236667776554 44 799999999999999987643322
Q ss_pred cccCCCCeeEEEEecCCceeeec--cceeEEEEeeCCC
Q psy14130 352 QSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHTTR 387 (494)
Q Consensus 352 ~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~~~ 387 (494)
.+..-|.+++..+++..++++ |..+--|.+.+++
T Consensus 243 --~h~adVl~Lav~~~~d~vfsaGvd~~ii~~~~~~~~ 278 (691)
T KOG2048|consen 243 --CHDADVLALAVADNEDRVFSAGVDPKIIQYSLTTNK 278 (691)
T ss_pred --hhhcceeEEEEcCCCCeEEEccCCCceEEEEecCCc
Confidence 235679999999997766665 6666666666643
|
|
| >KOG1963|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.6e-15 Score=145.79 Aligned_cols=142 Identities=19% Similarity=0.263 Sum_probs=99.1
Q ss_pred EEEEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCC--C--eEEEEecCC
Q psy14130 143 FLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGK--G--EALTVIDCH 218 (494)
Q Consensus 143 ~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~--~--~~~~~~~~h 218 (494)
..+.-...+.+|+.+++.. .. .....-..|.-.++|.++||++ +++|+|..||.|.+|.--. + ...+.+.=|
T Consensus 175 ~~i~~~~~~~~~~v~~~~~--~~-~~~~~~~~Htf~~t~~~~spn~-~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH 250 (792)
T KOG1963|consen 175 KGIVHMCKIHIYFVPKHTK--HT-SSRDITVHHTFNITCVALSPNE-RYLAAGDSDGRILVWRDFGSSDDSETCTLLHWH 250 (792)
T ss_pred EEEEEeeeEEEEEecccce--ee-ccchhhhhhcccceeEEecccc-ceEEEeccCCcEEEEeccccccccccceEEEec
Confidence 3344445689999988531 00 1111122377779999999998 7999999999999997432 1 233455568
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEe
Q psy14130 219 PDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWD 294 (494)
Q Consensus 219 ~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd 294 (494)
...|.+++|+++|.+|+||+..+.+.+|.+.+++ +++...-+..+..++++|++. +++.. ..|.+|.+-.
T Consensus 251 ~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~--kqfLPRLgs~I~~i~vS~ds~-~~sl~---~~DNqI~li~ 320 (792)
T KOG1963|consen 251 HDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGK--KQFLPRLGSPILHIVVSPDSD-LYSLV---LEDNQIHLIK 320 (792)
T ss_pred ccccceeEEecCCceEeecccceEEEEEeecCCC--cccccccCCeeEEEEEcCCCC-eEEEE---ecCceEEEEe
Confidence 8999999999999999999999999999999988 444444444477778887743 33333 2444444443
|
|
| >KOG0771|consensus | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.3e-16 Score=144.26 Aligned_cols=199 Identities=17% Similarity=0.175 Sum_probs=151.9
Q ss_pred EEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEee-
Q psy14130 180 GYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGV- 258 (494)
Q Consensus 180 ~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~- 258 (494)
.+++|+.+| ..|++|+.||++|+|+......+.....|...|.++.|+|||++|++.+.| ..+||+.++|..++...
T Consensus 148 k~vaf~~~g-s~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~ 225 (398)
T KOG0771|consen 148 KVVAFNGDG-SKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTP 225 (398)
T ss_pred eEEEEcCCC-CEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCC
Confidence 789999998 799999999999999977777777777899999999999999999999999 99999999998776665
Q ss_pred ecCCCCceEEEEECCC---C-eEEEEEecCCCCceEEEEeCCCCCC---ceeEeeecCCCceEEeEEeCCCCEEEEEEeC
Q psy14130 259 CHPGTRSSKAVFIGDT---G-RIVTTGFSRHSDRQVGLWDENDLNT---PLALETVDSSSGVLFPYYDHDTRILFLAGKG 331 (494)
Q Consensus 259 ~~~~~~~~~~~~~~~~---~-~l~~~g~~~~~d~~i~iwd~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~ 331 (494)
.........+.|..++ . ++++.- ..-+.|+.||+..... ............+.+++.+++|+++ +.|+.
T Consensus 226 ~~k~~~~~~cRF~~d~~~~~l~laa~~---~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~-AlGT~ 301 (398)
T KOG0771|consen 226 FSKDEMFSSCRFSVDNAQETLRLAASQ---FPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFL-ALGTM 301 (398)
T ss_pred cccchhhhhceecccCCCceEEEEEec---CCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEE-EEecc
Confidence 2333346677777763 2 333333 3456677777643222 1111222234589999999999999 88999
Q ss_pred CCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeee--ccceeEEEEeeCC
Q psy14130 332 DGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVT--QCEIFRFFKLHTT 386 (494)
Q Consensus 332 dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~--~~~~~~~~~l~~~ 386 (494)
||.|-+++..+-+.+... ...|...|+++.|+|+..++++ .+...++..+..+
T Consensus 302 dGsVai~~~~~lq~~~~v--k~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~vd 356 (398)
T KOG0771|consen 302 DGSVAIYDAKSLQRLQYV--KEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLAVD 356 (398)
T ss_pred CCcEEEEEeceeeeeEee--hhhheeeeeeEEEcCCcCcccccccCCceeEEEEeec
Confidence 999999999987764333 2345678999999999776654 6888889888773
|
|
| >KOG1007|consensus | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.6e-16 Score=134.32 Aligned_cols=224 Identities=14% Similarity=0.208 Sum_probs=161.0
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCC-------CeEEEEECCCC---------eEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFD-------YLIILWDVGKG---------EAL 212 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d-------~~v~iwd~~~~---------~~~ 212 (494)
++|.+.++...+.. -....+.-|.+.|..++-+|....+|+|+..| ..+.||.+... +++
T Consensus 40 NqVhll~~d~e~s~----l~skvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v 115 (370)
T KOG1007|consen 40 NQVHLLRLDSEGSE----LLSKVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECV 115 (370)
T ss_pred ceeEEEEecCccch----hhhhhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHh
Confidence 46888887766432 12235666889999999999988889888653 35789988542 123
Q ss_pred EEec-CCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce-EEEeee-----cCCCCceEEEEEC-CCCeEEEEEecC
Q psy14130 213 TVID-CHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLV-ISQGVC-----HPGTRSSKAVFIG-DTGRIVTTGFSR 284 (494)
Q Consensus 213 ~~~~-~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~-~~~~~~-----~~~~~~~~~~~~~-~~~~l~~~g~~~ 284 (494)
..+. .+-+.|.++.|.|++..+++-. |..|.+|++..+.. +..+.. +... ..+-.|+| .++..+++.
T Consensus 116 ~~Ldteavg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~-ftsg~WspHHdgnqv~tt--- 190 (370)
T KOG1007|consen 116 ASLDTEAVGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHS-FTSGAWSPHHDGNQVATT--- 190 (370)
T ss_pred hcCCHHHhCceeeEEEcCCCCeeEEec-cCceEEEEcccCcchheeecccccccccce-ecccccCCCCccceEEEe---
Confidence 3333 3556899999999999998876 88999999998774 444432 2222 56678888 344555554
Q ss_pred CCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEE
Q psy14130 285 HSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGF 364 (494)
Q Consensus 285 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~ 364 (494)
.|+++..||+|+..+...+.. .|...|+.+.|+|+.++++++++.||.|++||.++.+.....+.. +..-|+++.|
T Consensus 191 -~d~tl~~~D~RT~~~~~sI~d-AHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~--HsHWvW~VRf 266 (370)
T KOG1007|consen 191 -SDSTLQFWDLRTMKKNNSIED-AHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPG--HSHWVWAVRF 266 (370)
T ss_pred -CCCcEEEEEccchhhhcchhh-hhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCC--CceEEEEEEe
Confidence 599999999998766555443 355779999999999999999999999999999987644444444 4567999999
Q ss_pred ecCCce-eeec--cceeEEEEeeC
Q psy14130 365 MPKRGC-DVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 365 ~p~~~~-~~~~--~~~~~~~~l~~ 385 (494)
+|--.. ++++ |..+.+|....
T Consensus 267 n~~hdqLiLs~~SDs~V~Lsca~s 290 (370)
T KOG1007|consen 267 NPEHDQLILSGGSDSAVNLSCASS 290 (370)
T ss_pred cCccceEEEecCCCceeEEEeccc
Confidence 996543 3333 66666665443
|
|
| >KOG2139|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=5.2e-15 Score=131.14 Aligned_cols=209 Identities=15% Similarity=0.208 Sum_probs=138.9
Q ss_pred cEEEEEcCCCCCCCC-------cccceEecccccccEEEEEEcCCCCCEEEEEeC-CCeEEEEECCCCeEEEEecCCCCc
Q psy14130 150 RVKLWYIPDGGLSGN-------LNEWIMDLHGHKRRVGYIEWHPTAENVVASAGF-DYLIILWDVGKGEALTVIDCHPDV 221 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~-------~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~-d~~v~iwd~~~~~~~~~~~~h~~~ 221 (494)
-|.||.......... ....+....|| ..|++|+|+++| ..|++++. |..|.|||+.++..+.......+.
T Consensus 163 gIciW~~s~tln~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dg-t~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg 240 (445)
T KOG2139|consen 163 GICIWSDSRTLNANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDG-TILVTASFGSSSIMIWDPDTGQKIPLIPKGLGG 240 (445)
T ss_pred eeEEEEcCcccccccccccccccchhheeCCCC-ceeeEEEEcCCC-CEEeecccCcceEEEEcCCCCCcccccccCCCc
Confidence 489998764432211 01122233456 789999999998 68888875 568999999998766555445678
Q ss_pred eEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCc
Q psy14130 222 INCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTP 301 (494)
Q Consensus 222 v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~ 301 (494)
+.-+.|+|||.+|+.+.-|+..++|...............+ ++...+|+|.+..|+.+. .+.-++|.+.-..+.
T Consensus 241 ~slLkwSPdgd~lfaAt~davfrlw~e~q~wt~erw~lgsg-rvqtacWspcGsfLLf~~-----sgsp~lysl~f~~~~ 314 (445)
T KOG2139|consen 241 FSLLKWSPDGDVLFAATCDAVFRLWQENQSWTKERWILGSG-RVQTACWSPCGSFLLFAC-----SGSPRLYSLTFDGED 314 (445)
T ss_pred eeeEEEcCCCCEEEEecccceeeeehhcccceecceeccCC-ceeeeeecCCCCEEEEEE-----cCCceEEEEeecCCC
Confidence 89999999999999999999999996554443333333444 489999999988888887 333444443211110
Q ss_pred e------------eEee------ec----CCCceEEeEEeCCCCEEEEEEeCC-------CcEEEEEeeCCCceEEeccc
Q psy14130 302 L------------ALET------VD----SSSGVLFPYYDHDTRILFLAGKGD-------GNIRYYELTNERPYIHFLNQ 352 (494)
Q Consensus 302 ~------------~~~~------~~----~~~~v~~~~~~~~~~~l~~~g~~d-------g~i~~wd~~~~~~~~~~~~~ 352 (494)
. .... .. ..++..+++|+|.|++|.++-.+. +.|.+||.+..-++....-.
T Consensus 315 ~~~~~~~~~k~~lliaDL~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~~~v~~~k~~i~~fdtr~sp~vels~cg 394 (445)
T KOG2139|consen 315 SVFLRPQSIKRVLLIADLQEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQSFVLLCKLHISRFDTRKSPPVELSYCG 394 (445)
T ss_pred ccccCcccceeeeeeccchhhhhhcCcccccCccceeeECCCCCEEEEEEcCCchhhhhhhhhhhhcccccCceEEEecc
Confidence 0 0000 01 135678899999999995553322 34777888776554333334
Q ss_pred ccCCCCeeEEEEec
Q psy14130 353 SLSGAPQRGLGFMP 366 (494)
Q Consensus 353 ~~~~~~v~~~~~~p 366 (494)
+..+.....++|+|
T Consensus 395 ~i~ge~P~~IsF~p 408 (445)
T KOG2139|consen 395 MIGGEYPAYISFGP 408 (445)
T ss_pred cccCCCCceEEeee
Confidence 55555677888887
|
|
| >KOG1524|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.2e-15 Score=141.54 Aligned_cols=187 Identities=13% Similarity=0.203 Sum_probs=141.7
Q ss_pred ceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEe
Q psy14130 168 WIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLD 247 (494)
Q Consensus 168 ~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd 247 (494)
......+|.+.|.|-.|+|+| .-|+|++.||.|++|.- +|....++-....+|+|++|.|+.+.++-+-. +.+.|=.
T Consensus 96 VE~sv~AH~~A~~~gRW~~dG-tgLlt~GEDG~iKiWSr-sGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~g-~h~~IKp 172 (737)
T KOG1524|consen 96 VERSISAHAAAISSGRWSPDG-AGLLTAGEDGVIKIWSR-SGMLRSTVVQNEESIRCARWAPNSNSIVFCQG-GHISIKP 172 (737)
T ss_pred hhhhhhhhhhhhhhcccCCCC-ceeeeecCCceEEEEec-cchHHHHHhhcCceeEEEEECCCCCceEEecC-CeEEEee
Confidence 334567899999999999999 79999999999999985 56655566667889999999998876666543 4677777
Q ss_pred CCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEE
Q psy14130 248 PRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFL 327 (494)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 327 (494)
+.....+..+++|.+- +.++.|++. +.++++| ++|-..++||... ... +....+..++++++|.|+ + +|+
T Consensus 173 L~~n~k~i~WkAHDGi-iL~~~W~~~-s~lI~sg---GED~kfKvWD~~G-~~L--f~S~~~ey~ITSva~npd-~-~~~ 242 (737)
T KOG1524|consen 173 LAANSKIIRWRAHDGL-VLSLSWSTQ-SNIIASG---GEDFRFKIWDAQG-ANL--FTSAAEEYAITSVAFNPE-K-DYL 242 (737)
T ss_pred cccccceeEEeccCcE-EEEeecCcc-ccceeec---CCceeEEeecccC-ccc--ccCChhccceeeeeeccc-c-cee
Confidence 7767778889999998 999999998 5666666 6999999999754 221 233346678999999999 3 336
Q ss_pred EEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccceeEEEE
Q psy14130 328 AGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFK 382 (494)
Q Consensus 328 ~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~ 382 (494)
.|+. .++|+ . ....+.|..++|+|||..++.+++...++-
T Consensus 243 v~S~-nt~R~---~-----------~p~~GSifnlsWS~DGTQ~a~gt~~G~v~~ 282 (737)
T KOG1524|consen 243 LWSY-NTARF---S-----------SPRVGSIFNLSWSADGTQATCGTSTGQLIV 282 (737)
T ss_pred eeee-eeeee---c-----------CCCccceEEEEEcCCCceeeccccCceEEE
Confidence 6643 23441 1 112467999999999999988866655543
|
|
| >KOG1587|consensus | Back alignment and domain information |
|---|
Probab=99.69 E-value=7.4e-15 Score=143.96 Aligned_cols=162 Identities=14% Similarity=0.128 Sum_probs=126.2
Q ss_pred cccEEEEEEcCCCCCEEEEEeCCCeEEEEECCC---Ce-----EEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEe
Q psy14130 176 KRRVGYIEWHPTAENVVASAGFDYLIILWDVGK---GE-----ALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLD 247 (494)
Q Consensus 176 ~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~---~~-----~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd 247 (494)
...+++++|.+...+.++.|+.+|.|.--+-.. +. ....+..|.+.|+++.++|=+..++..+.|-+++||.
T Consensus 347 ~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs 426 (555)
T KOG1587|consen 347 AVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWS 426 (555)
T ss_pred ccceeeEeeccCCCceEEEEcCCcEEEEEeccCCcccccccccccccccccCcceEeeecCCCccceeeeeccceeEecc
Confidence 346899999999889999999999988744322 21 1334556899999999999766655555599999999
Q ss_pred CC-CCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCC-CCceeEeeecCCCceEEeEEeCCCCEE
Q psy14130 248 PR-TGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDL-NTPLALETVDSSSGVLFPYYDHDTRIL 325 (494)
Q Consensus 248 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l 325 (494)
.. ...++..+..+... +..++|+|....+++++ ..||.|.+||+... ..|....... ......+.|++.|+.|
T Consensus 427 ~~~~~~Pl~~~~~~~~~-v~~vaWSptrpavF~~~---d~~G~l~iWDLl~~~~~Pv~s~~~~-~~~l~~~~~s~~g~~l 501 (555)
T KOG1587|consen 427 EDVIASPLLSLDSSPDY-VTDVAWSPTRPAVFATV---DGDGNLDIWDLLQDDEEPVLSQKVC-SPALTRVRWSPNGKLL 501 (555)
T ss_pred ccCCCCcchhhhhccce-eeeeEEcCcCceEEEEE---cCCCceehhhhhccccCCccccccc-ccccceeecCCCCcEE
Confidence 87 66677777777766 89999999988999999 88999999998743 3333333332 4556678888889999
Q ss_pred EEEEeCCCcEEEEEeeCC
Q psy14130 326 FLAGKGDGNIRYYELTNE 343 (494)
Q Consensus 326 ~~~g~~dg~i~~wd~~~~ 343 (494)
++|...|.+++|++...
T Consensus 502 -avGd~~G~~~~~~l~~~ 518 (555)
T KOG1587|consen 502 -AVGDANGTTHILKLSES 518 (555)
T ss_pred -EEecCCCcEEEEEcCch
Confidence 99999999999999643
|
|
| >KOG2055|consensus | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.3e-15 Score=137.33 Aligned_cols=199 Identities=16% Similarity=0.199 Sum_probs=156.4
Q ss_pred cccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC--eEEEEecCCCCceEEEEEcCCCC-EEEEEeCCCeEEEEeCCCCc
Q psy14130 176 KRRVGYIEWHPTAENVVASAGFDYLIILWDVGKG--EALTVIDCHPDVINCLSFNRDGS-RLVTTCKDKTVRVLDPRTGL 252 (494)
Q Consensus 176 ~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~--~~~~~~~~h~~~v~~l~~~~~~~-~l~s~~~d~~v~iwd~~~~~ 252 (494)
.+.|+++.|||.. .+|++|+.|++++||-+... ..++.+.--..+|.+.+|.|+|. .+++++....+..||+.+.+
T Consensus 213 ~~~I~sv~FHp~~-plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak 291 (514)
T KOG2055|consen 213 HGGITSVQFHPTA-PLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAK 291 (514)
T ss_pred cCCceEEEecCCC-ceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeeccccc
Confidence 4679999999998 69999999999999988532 35666666678999999999999 89999999999999999887
Q ss_pred e--EEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEe
Q psy14130 253 V--ISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGK 330 (494)
Q Consensus 253 ~--~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~ 330 (494)
. +....++....+.....+++++.++..| ..|.|.+....+...... +.-.+.+..+.|+.|++.|++ .+
T Consensus 292 ~~k~~~~~g~e~~~~e~FeVShd~~fia~~G----~~G~I~lLhakT~eli~s---~KieG~v~~~~fsSdsk~l~~-~~ 363 (514)
T KOG2055|consen 292 VTKLKPPYGVEEKSMERFEVSHDSNFIAIAG----NNGHIHLLHAKTKELITS---FKIEGVVSDFTFSSDSKELLA-SG 363 (514)
T ss_pred cccccCCCCcccchhheeEecCCCCeEEEcc----cCceEEeehhhhhhhhhe---eeeccEEeeEEEecCCcEEEE-Ec
Confidence 3 3444555544466777888877777777 899999998877554332 234467889999999999944 55
Q ss_pred CCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 331 GDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 331 ~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
++|.|.+||++...++.++...- .-.-+++|.++++.+++++ .|++.||+.+.
T Consensus 364 ~~GeV~v~nl~~~~~~~rf~D~G--~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s 418 (514)
T KOG2055|consen 364 GTGEVYVWNLRQNSCLHRFVDDG--SVHGTSLCISLNGSYLATGSDSGIVNIYDGNS 418 (514)
T ss_pred CCceEEEEecCCcceEEEEeecC--ccceeeeeecCCCceEEeccCcceEEEeccch
Confidence 89999999999987765555431 2234667778999999987 88999999765
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.6e-13 Score=129.66 Aligned_cols=208 Identities=12% Similarity=0.099 Sum_probs=132.2
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEE-------EecCCCCc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALT-------VIDCHPDV 221 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~-------~~~~h~~~ 221 (494)
+.|.+|++.+.+... +.+..+. +.....+++++|++..++++...++.|.+||+.+...+. .+. ....
T Consensus 102 ~~v~v~~~~~~g~~~---~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~-~g~~ 176 (330)
T PRK11028 102 NCVSVSPLDKDGIPV---APIQIIE-GLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTV-EGAG 176 (330)
T ss_pred CeEEEEEECCCCCCC---Cceeecc-CCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecC-CCCC
Confidence 579999997543221 2222233 223467789999985455666677999999997633221 111 2345
Q ss_pred eEEEEEcCCCCEEEEEeC-CCeEEEEeCCC--Cc--eEEEeeecCC-----CCceEEEEECCCCeEEEEEecCCCCceEE
Q psy14130 222 INCLSFNRDGSRLVTTCK-DKTVRVLDPRT--GL--VISQGVCHPG-----TRSSKAVFIGDTGRIVTTGFSRHSDRQVG 291 (494)
Q Consensus 222 v~~l~~~~~~~~l~s~~~-d~~v~iwd~~~--~~--~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~g~~~~~d~~i~ 291 (494)
...++|+|+|++++++.. +++|.+||+.. ++ .+..+..... .....+.++|++..++++. ..++.|.
T Consensus 177 p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~---~~~~~I~ 253 (330)
T PRK11028 177 PRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACD---RTASLIS 253 (330)
T ss_pred CceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEec---CCCCeEE
Confidence 678999999999988876 89999999973 33 3444332211 1133577889876677765 5688999
Q ss_pred EEeCCCCCCcee-EeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEE
Q psy14130 292 LWDENDLNTPLA-LETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGF 364 (494)
Q Consensus 292 iwd~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~ 364 (494)
+|++........ ............+.++|+|++|+++...+++|.+|++............+..+....+++|
T Consensus 254 v~~i~~~~~~~~~~~~~~~~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~~~~g~l~~~~~~~~g~~P~~~~~ 327 (330)
T PRK11028 254 VFSVSEDGSVLSFEGHQPTETQPRGFNIDHSGKYLIAAGQKSHHISVYEIDGETGLLTELGRYAVGQGPMWVSV 327 (330)
T ss_pred EEEEeCCCCeEEEeEEEeccccCCceEECCCCCEEEEEEccCCcEEEEEEcCCCCcEEEccccccCCCceEEEE
Confidence 999865332222 2222222345678999999999888878999999998643211333344433444555555
|
|
| >KOG0649|consensus | Back alignment and domain information |
|---|
Probab=99.67 E-value=5e-14 Score=118.43 Aligned_cols=154 Identities=18% Similarity=0.232 Sum_probs=113.3
Q ss_pred ccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEE
Q psy14130 177 RRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQ 256 (494)
Q Consensus 177 ~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~ 256 (494)
..|+++...|.. +-++.++.|+.++-||+++|+..+++++|++.|.++.--.....++||+.||++|+||+++++.++.
T Consensus 115 PeINam~ldP~e-nSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ 193 (325)
T KOG0649|consen 115 PEINAMWLDPSE-NSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSM 193 (325)
T ss_pred CccceeEeccCC-CcEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeEE
Confidence 458899999886 4555566799999999999999999999999999999866677899999999999999999998887
Q ss_pred eeecCCCCceE-------EEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEE
Q psy14130 257 GVCHPGTRSSK-------AVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAG 329 (494)
Q Consensus 257 ~~~~~~~~~~~-------~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g 329 (494)
+.........+ .+...+ ...+++| ....+.+|.+++... ..+.. -...+..+.|..| .+ +++
T Consensus 194 ie~yk~~~~lRp~~g~wigala~~-edWlvCG----gGp~lslwhLrsse~-t~vfp--ipa~v~~v~F~~d--~v-l~~ 262 (325)
T KOG0649|consen 194 IEPYKNPNLLRPDWGKWIGALAVN-EDWLVCG----GGPKLSLWHLRSSES-TCVFP--IPARVHLVDFVDD--CV-LIG 262 (325)
T ss_pred eccccChhhcCcccCceeEEEecc-CceEEec----CCCceeEEeccCCCc-eEEEe--cccceeEeeeecc--eE-EEe
Confidence 75433221111 222233 4456666 577899999998554 33332 3455666777543 44 666
Q ss_pred eCCCcEEEEEeeC
Q psy14130 330 KGDGNIRYYELTN 342 (494)
Q Consensus 330 ~~dg~i~~wd~~~ 342 (494)
+..+.|.-|.+..
T Consensus 263 G~g~~v~~~~l~G 275 (325)
T KOG0649|consen 263 GEGNHVQSYTLNG 275 (325)
T ss_pred ccccceeeeeecc
Confidence 6777888888764
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.6e-13 Score=128.65 Aligned_cols=227 Identities=13% Similarity=0.184 Sum_probs=147.5
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEe-CCCeEEEEECCCC----eEEEEecCCCCceE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAG-FDYLIILWDVGKG----EALTVIDCHPDVIN 223 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s-~d~~v~iwd~~~~----~~~~~~~~h~~~v~ 223 (494)
+.|.+|++...+.. ....... .......++|+|++ ++|++++ .++.|.+||+.+. +.+..+. +.....
T Consensus 57 ~~i~~~~~~~~g~l----~~~~~~~-~~~~p~~i~~~~~g-~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~ 129 (330)
T PRK11028 57 FRVLSYRIADDGAL----TFAAESP-LPGSPTHISTDHQG-RFLFSASYNANCVSVSPLDKDGIPVAPIQIIE-GLEGCH 129 (330)
T ss_pred CcEEEEEECCCCce----EEeeeec-CCCCceEEEECCCC-CEEEEEEcCCCeEEEEEECCCCCCCCceeecc-CCCccc
Confidence 36888998732211 1111111 22346789999999 5665554 5889999999642 2233333 334567
Q ss_pred EEEEcCCCCEEEEEe-CCCeEEEEeCCCCceEE-----EeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCC
Q psy14130 224 CLSFNRDGSRLVTTC-KDKTVRVLDPRTGLVIS-----QGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEND 297 (494)
Q Consensus 224 ~l~~~~~~~~l~s~~-~d~~v~iwd~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~ 297 (494)
+++++|+|+++++++ .++.|.+||+.+...+. ......+.....+.|+|++..++++. ..+++|.+||+..
T Consensus 130 ~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~---~~~~~v~v~~~~~ 206 (330)
T PRK11028 130 SANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVN---ELNSSVDVWQLKD 206 (330)
T ss_pred EeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecCCCCCCceEEECCCCCEEEEEe---cCCCEEEEEEEeC
Confidence 889999999886555 56999999998643221 11222233367889999977777776 4589999999974
Q ss_pred CC-CceeEeeec-------CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCc
Q psy14130 298 LN-TPLALETVD-------SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRG 369 (494)
Q Consensus 298 ~~-~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ 369 (494)
.. .......+. +......+.++|+++++|++...++.|.+|++...............+...++++|+|++.
T Consensus 207 ~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~~~~p~~~~~~~dg~ 286 (330)
T PRK11028 207 PHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPTETQPRGFNIDHSGK 286 (330)
T ss_pred CCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEeccccCCceEECCCCC
Confidence 21 111111111 1112335789999999988777789999999976543334444433344567899999998
Q ss_pred eeeec---cceeEEEEeeC
Q psy14130 370 CDVTQ---CEIFRFFKLHT 385 (494)
Q Consensus 370 ~~~~~---~~~~~~~~l~~ 385 (494)
.++++ ++.+.+|+++.
T Consensus 287 ~l~va~~~~~~v~v~~~~~ 305 (330)
T PRK11028 287 YLIAAGQKSHHISVYEIDG 305 (330)
T ss_pred EEEEEEccCCcEEEEEEcC
Confidence 87753 67899999875
|
|
| >KOG0650|consensus | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.3e-15 Score=143.21 Aligned_cols=202 Identities=16% Similarity=0.191 Sum_probs=142.8
Q ss_pred ceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCC--EEEEEeC------
Q psy14130 168 WIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGS--RLVTTCK------ 239 (494)
Q Consensus 168 ~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~--~l~s~~~------ 239 (494)
+...+.||++.|.++...|.| ..|++|+.||+|+||.+.+|.++.++. ..+.|.+|+|+|.+. .||.+-.
T Consensus 392 ~~lvyrGHtg~Vr~iSvdp~G-~wlasGsdDGtvriWEi~TgRcvr~~~-~d~~I~~vaw~P~~~~~vLAvA~~~~~~iv 469 (733)
T KOG0650|consen 392 CALVYRGHTGLVRSISVDPSG-EWLASGSDDGTVRIWEIATGRCVRTVQ-FDSEIRSVAWNPLSDLCVLAVAVGECVLIV 469 (733)
T ss_pred eeeeEeccCCeEEEEEecCCc-ceeeecCCCCcEEEEEeecceEEEEEe-ecceeEEEEecCCCCceeEEEEecCceEEe
Confidence 345678999999999999998 699999999999999999999988877 556788888887554 2322211
Q ss_pred --------------------------CCeEEEEe----------------------------------------------
Q psy14130 240 --------------------------DKTVRVLD---------------------------------------------- 247 (494)
Q Consensus 240 --------------------------d~~v~iwd---------------------------------------------- 247 (494)
|+.+..|.
T Consensus 470 np~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~Vl 549 (733)
T KOG0650|consen 470 NPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVL 549 (733)
T ss_pred CccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEE
Confidence 11222332
Q ss_pred ---CCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCE
Q psy14130 248 ---PRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRI 324 (494)
Q Consensus 248 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 324 (494)
+...+....|.-..+ .+.++.|+|....++++. .+.|+|||+..... .-........+..++.+|.|..
T Consensus 550 iHQLSK~~sQ~PF~kskG-~vq~v~FHPs~p~lfVaT-----q~~vRiYdL~kqel--vKkL~tg~kwiS~msihp~GDn 621 (733)
T KOG0650|consen 550 IHQLSKRKSQSPFRKSKG-LVQRVKFHPSKPYLFVAT-----QRSVRIYDLSKQEL--VKKLLTGSKWISSMSIHPNGDN 621 (733)
T ss_pred EEecccccccCchhhcCC-ceeEEEecCCCceEEEEe-----ccceEEEehhHHHH--HHHHhcCCeeeeeeeecCCCCe
Confidence 111111111111112 278889999877777766 78999999875322 2222345567889999999999
Q ss_pred EEEEEeCCCcEEEEEeeCC-CceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEe
Q psy14130 325 LFLAGKGDGNIRYYELTNE-RPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKL 383 (494)
Q Consensus 325 l~~~g~~dg~i~~wd~~~~-~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l 383 (494)
| +.|+.|+.+..||+.-. +++.. +.. |...+++++|++.-.+++++ |+.+.++.-
T Consensus 622 l-i~gs~d~k~~WfDldlsskPyk~-lr~--H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg 679 (733)
T KOG0650|consen 622 L-ILGSYDKKMCWFDLDLSSKPYKT-LRL--HEKAVRSVAFHKRYPLFASGSDDGTVIVFHG 679 (733)
T ss_pred E-EEecCCCeeEEEEcccCcchhHH-hhh--hhhhhhhhhhccccceeeeecCCCcEEEEee
Confidence 9 88999999999999866 34322 222 35779999999999998886 677777653
|
|
| >KOG1517|consensus | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.5e-14 Score=141.76 Aligned_cols=303 Identities=18% Similarity=0.200 Sum_probs=188.1
Q ss_pred cceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEEeccc
Q psy14130 7 GPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHR 86 (494)
Q Consensus 7 ~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~ 86 (494)
.+-..+.|+| -...++++.+.-+|+ +|+++..+..............-+.++..|....+.+...+.+|.+.++.-..
T Consensus 1065 ~~pk~~~~hp-f~p~i~~ad~r~~i~-vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~ 1142 (1387)
T KOG1517|consen 1065 QPPKTLKFHP-FEPQIAAADDRERIR-VWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWKDYA 1142 (1387)
T ss_pred CCCceeeecC-CCceeEEcCCcceEE-EEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCceEEEecccc
Confidence 3556788999 456788888677787 99987665432222211222222344555666666666666666666644321
Q ss_pred cccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEE-cCcEEEEEcCCCCCCCCc
Q psy14130 87 FRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLP-IHRVKLWYIPDGGLSGNL 165 (494)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~v~iw~~~~~~~~~~~ 165 (494)
. ..++.+-|.+. ..+. +....+-+.. ..+.|.- ..|.+++.+ ...|+|||......
T Consensus 1143 ~---~~~~~eLVTaw--------~~Ls------~~~~~~r~~~-~v~dWqQ-~~G~Ll~tGd~r~IRIWDa~~E~~---- 1199 (1387)
T KOG1517|consen 1143 D---KWKKPELVTAW--------SSLS------DQLPGARGTG-LVVDWQQ-QSGHLLVTGDVRSIRIWDAHKEQV---- 1199 (1387)
T ss_pred c---ccCCceeEEee--------cccc------ccCccCCCCC-eeeehhh-hCCeEEecCCeeEEEEEeccccee----
Confidence 1 00122222111 1110 1111111111 2333332 334444444 55799999987632
Q ss_pred ccceEec-ccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe---EEEEecCCCCc--eEEEEEcCCCC-EEEEEe
Q psy14130 166 NEWIMDL-HGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE---ALTVIDCHPDV--INCLSFNRDGS-RLVTTC 238 (494)
Q Consensus 166 ~~~~~~~-~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~---~~~~~~~h~~~--v~~l~~~~~~~-~l~s~~ 238 (494)
.+.+ .+....|+++.-+-.+.+++++|-.||.|++||.+... .+...+.|... |..+.+.+.|- .|++|+
T Consensus 1200 ---~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs 1276 (1387)
T KOG1517|consen 1200 ---VADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGS 1276 (1387)
T ss_pred ---EeecccCCCccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeec
Confidence 2222 23556678887665555899999999999999987543 46677888887 99999998665 599999
Q ss_pred CCCeEEEEeCCCCc--eEEEeeecC--CCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEee-----ecC
Q psy14130 239 KDKTVRVLDPRTGL--VISQGVCHP--GTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALET-----VDS 309 (494)
Q Consensus 239 ~d~~v~iwd~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~-----~~~ 309 (494)
.||.|++||+|... ...++..|. +...+.+..+++ ..++++| +. +.|+||++..... ..+.. ...
T Consensus 1277 ~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~h-apiiAsG---s~-q~ikIy~~~G~~l-~~~k~n~~F~~q~ 1350 (1387)
T KOG1517|consen 1277 QDGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEH-APIIASG---SA-QLIKIYSLSGEQL-NIIKYNPGFMGQR 1350 (1387)
T ss_pred cCCeEEEEecccCcccccceeeeccccCccceeeeeccC-CCeeeec---Cc-ceEEEEecChhhh-cccccCcccccCc
Confidence 99999999999743 222333333 322566666666 7899999 44 9999999864221 11111 112
Q ss_pred CCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCC
Q psy14130 310 SSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNER 344 (494)
Q Consensus 310 ~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~ 344 (494)
...+.+++|+|..-.+ ++|+.|.+|.||....++
T Consensus 1351 ~gs~scL~FHP~~~ll-AaG~~Ds~V~iYs~~k~~ 1384 (1387)
T KOG1517|consen 1351 IGSVSCLAFHPHRLLL-AAGSADSTVSIYSCEKPR 1384 (1387)
T ss_pred CCCcceeeecchhHhh-hhccCCceEEEeecCCcC
Confidence 3567899999988777 999999999999877654
|
|
| >KOG2110|consensus | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.4e-13 Score=119.54 Aligned_cols=148 Identities=16% Similarity=0.187 Sum_probs=115.6
Q ss_pred cEEEEEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEe--CCCeEEEEECCCCeEEEEecCC
Q psy14130 141 GAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAG--FDYLIILWDVGKGEALTVIDCH 218 (494)
Q Consensus 141 g~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s--~d~~v~iwd~~~~~~~~~~~~h 218 (494)
.+++|+=.++|.|||+.+.++..++ .+...+...+.++.+++.+ .+||-=+ ..|.|.+||+.+-+++..+..|
T Consensus 98 ~RLvV~Lee~IyIydI~~MklLhTI----~t~~~n~~gl~AlS~n~~n-~ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH 172 (391)
T KOG2110|consen 98 KRLVVCLEESIYIYDIKDMKLLHTI----ETTPPNPKGLCALSPNNAN-CYLAYPGSTTSGDVVLFDTINLQPVNTINAH 172 (391)
T ss_pred ceEEEEEcccEEEEecccceeehhh----hccCCCccceEeeccCCCC-ceEEecCCCCCceEEEEEcccceeeeEEEec
Confidence 3455555557999999998554332 2333466778888888776 4665432 3589999999999999999999
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCe-EEEEeCCCCceEEEeeecC-CCCceEEEEECCCCeEEEEEecCCCCceEEEEeCC
Q psy14130 219 PDVINCLSFNRDGSRLVTTCKDKT-VRVLDPRTGLVISQGVCHP-GTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEN 296 (494)
Q Consensus 219 ~~~v~~l~~~~~~~~l~s~~~d~~-v~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~ 296 (494)
++.+.+++|+++|.+|||+|..|+ ||++.+.+|+.+.++.... ...+.+++|++++. +|++. +..++|++|.+.
T Consensus 173 ~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~-~L~~s---S~TeTVHiFKL~ 248 (391)
T KOG2110|consen 173 KGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQ-FLAAS---SNTETVHIFKLE 248 (391)
T ss_pred CCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCC-eEEEe---cCCCeEEEEEec
Confidence 999999999999999999999887 7999999999998885432 33478899999954 55555 589999999876
Q ss_pred C
Q psy14130 297 D 297 (494)
Q Consensus 297 ~ 297 (494)
.
T Consensus 249 ~ 249 (391)
T KOG2110|consen 249 K 249 (391)
T ss_pred c
Confidence 4
|
|
| >KOG2139|consensus | Back alignment and domain information |
|---|
Probab=99.66 E-value=2e-14 Score=127.49 Aligned_cols=231 Identities=18% Similarity=0.196 Sum_probs=158.0
Q ss_pred cCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCC
Q psy14130 119 HDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFD 198 (494)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d 198 (494)
.+....+|++.+++++....++ .|++|+-... .+..--......|+|++|-|.+...|+.|...
T Consensus 99 ~dlr~~aWhqH~~~fava~ndd---------vVriy~ksst-------~pt~Lks~sQrnvtclawRPlsaselavgCr~ 162 (445)
T KOG2139|consen 99 IDLRGVAWHQHIIAFAVATNDD---------VVRIYDKSST-------CPTKLKSVSQRNVTCLAWRPLSASELAVGCRA 162 (445)
T ss_pred cceeeEeechhhhhhhhhccCc---------EEEEeccCCC-------CCceecchhhcceeEEEeccCCcceeeeeecc
Confidence 5677889999998888876554 6999987653 22111122457799999999988888888864
Q ss_pred CeEEEEECCCC----eE----------EEEecCCCCceEEEEEcCCCCEEEEEeC-CCeEEEEeCCCCceEEEeeecCCC
Q psy14130 199 YLIILWDVGKG----EA----------LTVIDCHPDVINCLSFNRDGSRLVTTCK-DKTVRVLDPRTGLVISQGVCHPGT 263 (494)
Q Consensus 199 ~~v~iwd~~~~----~~----------~~~~~~h~~~v~~l~~~~~~~~l~s~~~-d~~v~iwd~~~~~~~~~~~~~~~~ 263 (494)
.|.+|..... .. +..-.+| .+|++++|++||..+++++- |..|.|||+.++..+.-.....+.
T Consensus 163 -gIciW~~s~tln~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg 240 (445)
T KOG2139|consen 163 -GICIWSDSRTLNANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGG 240 (445)
T ss_pred -eeEEEEcCcccccccccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCc
Confidence 5899987421 11 1122344 68999999999999999984 688999999999865544333344
Q ss_pred CceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCC
Q psy14130 264 RSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNE 343 (494)
Q Consensus 264 ~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~ 343 (494)
++-+.|+|++..++++. -|+..++|.....-.. ..-.-..+.|...+|+|+|+.|+.+.++.-.++--.....
T Consensus 241 -~slLkwSPdgd~lfaAt----~davfrlw~e~q~wt~--erw~lgsgrvqtacWspcGsfLLf~~sgsp~lysl~f~~~ 313 (445)
T KOG2139|consen 241 -FSLLKWSPDGDVLFAAT----CDAVFRLWQENQSWTK--ERWILGSGRVQTACWSPCGSFLLFACSGSPRLYSLTFDGE 313 (445)
T ss_pred -eeeEEEcCCCCEEEEec----ccceeeeehhccccee--cceeccCCceeeeeecCCCCEEEEEEcCCceEEEEeecCC
Confidence 78899999988888887 6999999965432111 1112244588999999999999888766554443333222
Q ss_pred CceEE---------ecc----------cccCCCCeeEEEEecCCceeeec
Q psy14130 344 RPYIH---------FLN----------QSLSGAPQRGLGFMPKRGCDVTQ 374 (494)
Q Consensus 344 ~~~~~---------~~~----------~~~~~~~v~~~~~~p~~~~~~~~ 374 (494)
..... ++. +-...++..+++|.|.|.++++.
T Consensus 314 ~~~~~~~~~~k~~lliaDL~e~ti~ag~~l~cgeaq~lawDpsGeyLav~ 363 (445)
T KOG2139|consen 314 DSVFLRPQSIKRVLLIADLQEVTICAGQRLCCGEAQCLAWDPSGEYLAVI 363 (445)
T ss_pred CccccCcccceeeeeeccchhhhhhcCcccccCccceeeECCCCCEEEEE
Confidence 11110 000 01124678889999999888773
|
|
| >KOG0290|consensus | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.4e-14 Score=122.46 Aligned_cols=204 Identities=18% Similarity=0.280 Sum_probs=154.5
Q ss_pred cccccEEEEEEcCCCC----CEEEEEeCCCeEEEEECCCCeE----EEEe-----cCCCCceEEEEEcC-CCCEEEEEeC
Q psy14130 174 GHKRRVGYIEWHPTAE----NVVASAGFDYLIILWDVGKGEA----LTVI-----DCHPDVINCLSFNR-DGSRLVTTCK 239 (494)
Q Consensus 174 ~h~~~V~~~~~~p~~~----~~l~s~s~d~~v~iwd~~~~~~----~~~~-----~~h~~~v~~l~~~~-~~~~l~s~~~ 239 (494)
.|.-+++.+-|.|+.. .+|||++ ..+|+|.+...+. ...+ ..+..++++..|+. +-++|.++|-
T Consensus 94 d~~YP~tK~~wiPd~~g~~pdlLATs~--D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSi 171 (364)
T KOG0290|consen 94 DHPYPVTKLMWIPDSKGVYPDLLATSS--DFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSI 171 (364)
T ss_pred CCCCCccceEecCCccccCcchhhccc--CeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecc
Confidence 5899999999999852 4677765 3799999874221 1111 23668999999998 7789999999
Q ss_pred CCeEEEEeCCCCc---eEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecC-CCceEE
Q psy14130 240 DKTVRVLDPRTGL---VISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDS-SSGVLF 315 (494)
Q Consensus 240 d~~v~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~v~~ 315 (494)
|-+..|||++++. ...++.+|... +..++|...+..++++. +.||.+|+||+|.......+..-+. +.....
T Consensus 172 DTTCTiWdie~~~~~~vkTQLIAHDKE-V~DIaf~~~s~~~FASv---gaDGSvRmFDLR~leHSTIIYE~p~~~~pLlR 247 (364)
T KOG0290|consen 172 DTTCTIWDIETGVSGTVKTQLIAHDKE-VYDIAFLKGSRDVFASV---GADGSVRMFDLRSLEHSTIIYEDPSPSTPLLR 247 (364)
T ss_pred cCeEEEEEEeeccccceeeEEEecCcc-eeEEEeccCccceEEEe---cCCCcEEEEEecccccceEEecCCCCCCccee
Confidence 9999999999874 46778899988 99999999777777776 6999999999998766555444333 567888
Q ss_pred eEEeCCCCEEEEEEeCC-CcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceee-e--ccceeEEEEeeC
Q psy14130 316 PYYDHDTRILFLAGKGD-GNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDV-T--QCEIFRFFKLHT 385 (494)
Q Consensus 316 ~~~~~~~~~l~~~g~~d-g~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~-~--~~~~~~~~~l~~ 385 (494)
++|++....++++-..| ..|.+.|++........+.. |...|.+++|.|....-+ + .|...-+|++..
T Consensus 248 LswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~--H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q 319 (364)
T KOG0290|consen 248 LSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRN--HQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQ 319 (364)
T ss_pred eccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhc--CcccccceEecCCCCceeeecCCcceEEEEeccc
Confidence 99999876665665444 56999999986543333443 467899999999655333 3 378889999987
|
|
| >COG2319 FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.1e-12 Score=129.47 Aligned_cols=214 Identities=26% Similarity=0.456 Sum_probs=161.3
Q ss_pred cEEEEEcCCCCCCCCcccceE-ecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeE-EEEecCCCCceEEEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIM-DLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEA-LTVIDCHPDVINCLSF 227 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~-~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~-~~~~~~h~~~v~~l~~ 227 (494)
.|++||...+ .... .+.+|...+ ...|+|++ ..+++++.|+.+++||+..... +..+.+|...|.++.|
T Consensus 222 ~i~~wd~~~~-------~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 292 (466)
T COG2319 222 TIRLWDLSTG-------KLLRSTLSGHSDSV-VSSFSPDG-SLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAF 292 (466)
T ss_pred cEEEEECCCC-------cEEeeecCCCCcce-eEeECCCC-CEEEEecCCCcEEEeeecCCCcEEEEEecCCccEEEEEE
Confidence 6889987755 4444 688888886 44899998 7888999999999999986654 4455678999999999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceEEEee--ecCCCCceEEEEECCC-CeEEEEEecCCCCceEEEEeCCCCCCceeE
Q psy14130 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGV--CHPGTRSSKAVFIGDT-GRIVTTGFSRHSDRQVGLWDENDLNTPLAL 304 (494)
Q Consensus 228 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~ 304 (494)
+|++..+++++.|+.+++||.++........ .|... +..+.+ +.. ..++..+ ..|+.+.+|+..... ..
T Consensus 293 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~---~~d~~~~~~~~~~~~---~~ 364 (466)
T COG2319 293 SPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGP-VSSLSF-SPDGSLLVSGG---SDDGTIRLWDLRTGK---PL 364 (466)
T ss_pred CCCCCEEEEeeCCCcEEEEEcCCCceEEEeeecccCCc-eEEEEE-CCCCCEEEEee---cCCCcEEeeecCCCc---ee
Confidence 9988888889999999999999888666665 77764 778888 543 4566654 467899999988755 22
Q ss_pred eeecCCCceEEeEEeCCCCEEEEE-EeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeee--ccceeEEE
Q psy14130 305 ETVDSSSGVLFPYYDHDTRILFLA-GKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVT--QCEIFRFF 381 (494)
Q Consensus 305 ~~~~~~~~v~~~~~~~~~~~l~~~-g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~--~~~~~~~~ 381 (494)
........+..+.+.+ ...+ .. +..++.+.+|+.............. ..+....+.+++..++. .++.+++|
T Consensus 365 ~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (466)
T COG2319 365 KTLEGHSNVLSVSFSP-DGRV-VSSGSTDGTVRLWDLSTGSLLRNLDGHT---SRVTSLDFSPDGKSLASGSSDNTIRLW 439 (466)
T ss_pred EEecCCceEEEEEECC-CCCE-EEEecCCCceEEEecccCeeeeeccCCC---CcEEEEEECCCCcEEEEecCCCcEEEE
Confidence 2222323378888888 5444 44 7899999999999876543332211 67888999999888876 58889999
Q ss_pred EeeC
Q psy14130 382 KLHT 385 (494)
Q Consensus 382 ~l~~ 385 (494)
++..
T Consensus 440 ~~~~ 443 (466)
T COG2319 440 DLKT 443 (466)
T ss_pred eccC
Confidence 8765
|
|
| >KOG1009|consensus | Back alignment and domain information |
|---|
Probab=99.63 E-value=3.7e-15 Score=134.00 Aligned_cols=194 Identities=20% Similarity=0.203 Sum_probs=146.0
Q ss_pred cccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe---------EEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEE
Q psy14130 176 KRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE---------ALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVL 246 (494)
Q Consensus 176 ~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~---------~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iw 246 (494)
..+|.++.|+++..+.||||+.|..|++|-+..+. .+..+..|...|+.+.|+|+|.+|+||+.+|.|.+|
T Consensus 13 ~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lW 92 (434)
T KOG1009|consen 13 HEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLW 92 (434)
T ss_pred CCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEE
Confidence 45799999999986799999999999999886432 234567899999999999999999999999999999
Q ss_pred eCC--------C--------CceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCC
Q psy14130 247 DPR--------T--------GLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSS 310 (494)
Q Consensus 247 d~~--------~--------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 310 (494)
-.. + ......+.+|... +..++|+++ +.++.+| +.|..+++||+..+..... ..+|.
T Consensus 93 k~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~d-iydL~Ws~d-~~~l~s~---s~dns~~l~Dv~~G~l~~~--~~dh~ 165 (434)
T KOG1009|consen 93 KQGDVRIFDADTEADLNKEKWVVKKVLRGHRDD-IYDLAWSPD-SNFLVSG---SVDNSVRLWDVHAGQLLAI--LDDHE 165 (434)
T ss_pred EecCcCCccccchhhhCccceEEEEEecccccc-hhhhhccCC-Cceeeee---eccceEEEEEeccceeEee--ccccc
Confidence 765 2 1244556678777 999999999 5666666 6999999999998654322 23566
Q ss_pred CceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEec-----cc--c-------------cCCCCeeEEEEecCCce
Q psy14130 311 SGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFL-----NQ--S-------------LSGAPQRGLGFMPKRGC 370 (494)
Q Consensus 311 ~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~-----~~--~-------------~~~~~v~~~~~~p~~~~ 370 (494)
..+..++|+|-++++ ++-+.|...+.+.+...+.....- .. . ......+.++|+|+|.+
T Consensus 166 ~yvqgvawDpl~qyv-~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG~l 244 (434)
T KOG1009|consen 166 HYVQGVAWDPLNQYV-ASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDGSL 244 (434)
T ss_pred cccceeecchhhhhh-hhhccCcccceeeeeeeeeeeeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccCCCCcE
Confidence 788899999999998 887788877777765443211110 00 0 01123466889999999
Q ss_pred eeeccce
Q psy14130 371 DVTQCEI 377 (494)
Q Consensus 371 ~~~~~~~ 377 (494)
+++..+.
T Consensus 245 lvtPag~ 251 (434)
T KOG1009|consen 245 LVTPAGL 251 (434)
T ss_pred EEcccce
Confidence 9986543
|
|
| >KOG1034|consensus | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.4e-14 Score=126.86 Aligned_cols=232 Identities=19% Similarity=0.188 Sum_probs=161.6
Q ss_pred EEEEEEcCcEEEEEcCCCCCCCCcccceEec--ccccccEEEEEEcCC---CCCEEEEEeCCCeEEEEECCCCeEEEEec
Q psy14130 142 AFLVLPIHRVKLWYIPDGGLSGNLNEWIMDL--HGHKRRVGYIEWHPT---AENVVASAGFDYLIILWDVGKGEALTVID 216 (494)
Q Consensus 142 ~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~--~~h~~~V~~~~~~p~---~~~~l~s~s~d~~v~iwd~~~~~~~~~~~ 216 (494)
.++..+.+.+.||......-. ..++.. ..|......++|+-+ +.-+||.|+.-|.|+|.|+.+++....+.
T Consensus 57 vfatvG~~rvtiy~c~~d~~i----r~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~~~ 132 (385)
T KOG1034|consen 57 VFATVGGNRVTIYECPGDGGI----RLLQSYADEDHDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKNYR 132 (385)
T ss_pred eEEEeCCcEEEEEEECCccce----eeeeeccCCCCCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhhcccee
Confidence 444444557888887765321 111111 137777888888643 33589999999999999999999999999
Q ss_pred CCCCceEEEEEcCC-CCEEEEEeCCCeEEEEeCCCCceEEEe---eecCCCCceEEEEECCCCeEEEEEecCCCCceEEE
Q psy14130 217 CHPDVINCLSFNRD-GSRLVTTCKDKTVRVLDPRTGLVISQG---VCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGL 292 (494)
Q Consensus 217 ~h~~~v~~l~~~~~-~~~l~s~~~d~~v~iwd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~i 292 (494)
+|...|+.+.|.|+ .++++++|+|-.||+|++++..++..+ .+|.+. +.++.|+.++.+++++| .|.+|++
T Consensus 133 ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrde-VLSvD~~~~gd~i~ScG----mDhslk~ 207 (385)
T KOG1034|consen 133 GHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDE-VLSVDFSLDGDRIASCG----MDHSLKL 207 (385)
T ss_pred ccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCc-EEEEEEcCCCCeeeccC----CcceEEE
Confidence 99999999999996 468999999999999999999988876 578887 99999999988787777 8999999
Q ss_pred EeCCCCCCceeE--------------------------eeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEe-eCCCc
Q psy14130 293 WDENDLNTPLAL--------------------------ETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYEL-TNERP 345 (494)
Q Consensus 293 wd~~~~~~~~~~--------------------------~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~-~~~~~ 345 (494)
|++...+.+..+ ..--|...|-|+.|- |.++ ++-+.++.|..|.. +-++.
T Consensus 208 W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~--gd~i-lSkscenaI~~w~pgkl~e~ 284 (385)
T KOG1034|consen 208 WRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWF--GDFI-LSKSCENAIVCWKPGKLEES 284 (385)
T ss_pred EecChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccchHHHHHHH--hhhe-eecccCceEEEEecchhhhh
Confidence 998732111000 000122334444442 4566 88888999999987 22221
Q ss_pred ---------eEEecccccC-CCCeeEE--EEecCCceeeec--cceeEEEEeeC
Q psy14130 346 ---------YIHFLNQSLS-GAPQRGL--GFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 346 ---------~~~~~~~~~~-~~~v~~~--~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
-...+.++.. ...++-+ +|.|-+..++.+ .+.+.+|+|..
T Consensus 285 ~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g~v~vwdL~~ 338 (385)
T KOG1034|consen 285 IHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSGKVYVWDLDN 338 (385)
T ss_pred hhccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhhccCCCcEEEEECCC
Confidence 1122222221 1234444 456667777765 77889999987
|
|
| >KOG0649|consensus | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.2e-13 Score=116.28 Aligned_cols=204 Identities=17% Similarity=0.229 Sum_probs=149.5
Q ss_pred cceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeE------EEEe--cCCC-----CceEEEEEcCCCCE
Q psy14130 167 EWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEA------LTVI--DCHP-----DVINCLSFNRDGSR 233 (494)
Q Consensus 167 ~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~------~~~~--~~h~-----~~v~~l~~~~~~~~ 233 (494)
.++...++|.++|+.++|+. .+|++|+ ||.|+-|..+.... +... .-|. -.|+++...|..+-
T Consensus 53 ~~iv~eqahdgpiy~~~f~d---~~Lls~g-dG~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enS 128 (325)
T KOG0649|consen 53 LKIVPEQAHDGPIYYLAFHD---DFLLSGG-DGLVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENS 128 (325)
T ss_pred cceeeccccCCCeeeeeeeh---hheeecc-CceEEEeeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCc
Confidence 45566789999999999993 4777877 59999998754321 1111 1122 35889999998877
Q ss_pred EEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCC--
Q psy14130 234 LVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSS-- 311 (494)
Q Consensus 234 l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~-- 311 (494)
++.++.|+.++.||+++|+..+++.+|+.. +.+++--...+.+++.+ +||++|+||.++.+....+...++..
T Consensus 129 i~~AgGD~~~y~~dlE~G~i~r~~rGHtDY-vH~vv~R~~~~qilsG~----EDGtvRvWd~kt~k~v~~ie~yk~~~~l 203 (325)
T KOG0649|consen 129 ILFAGGDGVIYQVDLEDGRIQREYRGHTDY-VHSVVGRNANGQILSGA----EDGTVRVWDTKTQKHVSMIEPYKNPNLL 203 (325)
T ss_pred EEEecCCeEEEEEEecCCEEEEEEcCCcce-eeeeeecccCcceeecC----CCccEEEEeccccceeEEeccccChhhc
Confidence 888889999999999999999999999998 77776645557777766 99999999999877655554433321
Q ss_pred ----ceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccceeEEEEeeC
Q psy14130 312 ----GVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 312 ----~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~~ 385 (494)
+-...+..-+..+| ++| +...+.+|+++..++...+ .-+.++..+.|..|..+.+.....+.-|.+..
T Consensus 204 Rp~~g~wigala~~edWl-vCG-gGp~lslwhLrsse~t~vf----pipa~v~~v~F~~d~vl~~G~g~~v~~~~l~G 275 (325)
T KOG0649|consen 204 RPDWGKWIGALAVNEDWL-VCG-GGPKLSLWHLRSSESTCVF----PIPARVHLVDFVDDCVLIGGEGNHVQSYTLNG 275 (325)
T ss_pred CcccCceeEEEeccCceE-Eec-CCCceeEEeccCCCceEEE----ecccceeEeeeecceEEEeccccceeeeeecc
Confidence 12224555567787 776 5567999999998875433 33577999999988655555577888888876
|
|
| >KOG1188|consensus | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.1e-14 Score=126.51 Aligned_cols=186 Identities=17% Similarity=0.225 Sum_probs=145.3
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCC-CCCEEEEEeCCCeEEEEECCCCeEE--EEecCCC-CceEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPT-AENVVASAGFDYLIILWDVGKGEAL--TVIDCHP-DVINC 224 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~-~~~~l~s~s~d~~v~iwd~~~~~~~--~~~~~h~-~~v~~ 224 (494)
+.|+|||..++ ..+..+++|...++.++|..+ +.+.+.+|+.||+|++||++..... ..+.++. .+..+
T Consensus 50 gsv~lyd~~tg-------~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f~~ 122 (376)
T KOG1188|consen 50 GSVRLYDKGTG-------QLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPFIC 122 (376)
T ss_pred CeEEEEeccch-------hhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcceE
Confidence 36999999998 666788899999999999764 5578999999999999999876543 3445555 45667
Q ss_pred EEEcCCCCEEEEEe----CCCeEEEEeCCCCce-EEEe-eecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCC
Q psy14130 225 LSFNRDGSRLVTTC----KDKTVRVLDPRTGLV-ISQG-VCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDL 298 (494)
Q Consensus 225 l~~~~~~~~l~s~~----~d~~v~iwd~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~ 298 (494)
++-+-.++.+++|. .|-.|.+||+|..+. +..+ ..|... ++.+.|+|.+..+|.+| +.||.|.|||+...
T Consensus 123 ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DD-VT~lrFHP~~pnlLlSG---SvDGLvnlfD~~~d 198 (376)
T KOG1188|consen 123 LDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDD-VTQLRFHPSDPNLLLSG---SVDGLVNLFDTKKD 198 (376)
T ss_pred eeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCc-ceeEEecCCCCCeEEee---cccceEEeeecCCC
Confidence 77766788888876 367899999998774 5444 567666 99999999999999999 99999999998754
Q ss_pred CCc-eeEeeecCCCceEEeEEeCCC-CEEEEEEeCCCcEEEEEeeCCCce
Q psy14130 299 NTP-LALETVDSSSGVLFPYYDHDT-RILFLAGKGDGNIRYYELTNERPY 346 (494)
Q Consensus 299 ~~~-~~~~~~~~~~~v~~~~~~~~~-~~l~~~g~~dg~i~~wd~~~~~~~ 346 (494)
... .....+.+...|-++.|..++ +.| .+-+...+..+|+++.+.+.
T Consensus 199 ~EeDaL~~viN~~sSI~~igw~~~~ykrI-~clTH~Etf~~~ele~~~~~ 247 (376)
T KOG1188|consen 199 NEEDALLHVINHGSSIHLIGWLSKKYKRI-MCLTHMETFAIYELEDGSEE 247 (376)
T ss_pred cchhhHHHhhcccceeeeeeeecCCcceE-EEEEccCceeEEEccCCChh
Confidence 321 222344566779999999888 234 56678899999999988753
|
|
| >KOG1538|consensus | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.6e-13 Score=130.81 Aligned_cols=228 Identities=14% Similarity=0.168 Sum_probs=162.5
Q ss_pred cCCcEEEEEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe-------
Q psy14130 138 AGGGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE------- 210 (494)
Q Consensus 138 ~~~g~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~------- 210 (494)
.+|..+++...+++.|||..++ ..+++++||.+.|+|++|+.+| ..+|||+.|..|.+|...-..
T Consensus 22 PDGsqL~lAAg~rlliyD~ndG-------~llqtLKgHKDtVycVAys~dG-krFASG~aDK~VI~W~~klEG~LkYSH~ 93 (1081)
T KOG1538|consen 22 PDGTQLILAAGSRLLVYDTSDG-------TLLQPLKGHKDTVYCVAYAKDG-KRFASGSADKSVIIWTSKLEGILKYSHN 93 (1081)
T ss_pred CCCceEEEecCCEEEEEeCCCc-------ccccccccccceEEEEEEccCC-ceeccCCCceeEEEecccccceeeeccC
Confidence 4566677777789999999999 6678899999999999999999 699999999999999874211
Q ss_pred -EEEE--ecC---------------------------CCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEe--e
Q psy14130 211 -ALTV--IDC---------------------------HPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQG--V 258 (494)
Q Consensus 211 -~~~~--~~~---------------------------h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~--~ 258 (494)
.++. |.. ....|.+++|..||.+++-|-.||+|.+-+-. ++....+ .
T Consensus 94 D~IQCMsFNP~~h~LasCsLsdFglWS~~qK~V~K~kss~R~~~CsWtnDGqylalG~~nGTIsiRNk~-gEek~~I~Rp 172 (1081)
T KOG1538|consen 94 DAIQCMSFNPITHQLASCSLSDFGLWSPEQKSVSKHKSSSRIICCSWTNDGQYLALGMFNGTISIRNKN-GEEKVKIERP 172 (1081)
T ss_pred CeeeEeecCchHHHhhhcchhhccccChhhhhHHhhhhheeEEEeeecCCCcEEEEeccCceEEeecCC-CCcceEEeCC
Confidence 1111 110 12467888899999999999999999998643 4422222 3
Q ss_pred ecCCCCceEEEEECCCC----eEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCc
Q psy14130 259 CHPGTRSSKAVFIGDTG----RIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGN 334 (494)
Q Consensus 259 ~~~~~~~~~~~~~~~~~----~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~ 334 (494)
+.....+.+++|+|..+ .++++. ....++.+|.+..... -. ...-.-...|+.|.++|+++ +.|+.|+.
T Consensus 173 gg~Nspiwsi~~~p~sg~G~~di~aV~---DW~qTLSFy~LsG~~I-gk--~r~L~FdP~CisYf~NGEy~-LiGGsdk~ 245 (1081)
T KOG1538|consen 173 GGSNSPIWSICWNPSSGEGRNDILAVA---DWGQTLSFYQLSGKQI-GK--DRALNFDPCCISYFTNGEYI-LLGGSDKQ 245 (1081)
T ss_pred CCCCCCceEEEecCCCCCCccceEEEE---eccceeEEEEecceee-cc--cccCCCCchhheeccCCcEE-EEccCCCc
Confidence 33444599999998743 356665 5677777777653211 00 11122346788999999999 77889999
Q ss_pred EEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 335 IRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 335 i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
+++|--.. -.+ -.+..+ ..-|+.++..|++...+.+ |+++-.|++-.
T Consensus 246 L~~fTR~G-vrL-GTvg~~--D~WIWtV~~~PNsQ~v~~GCqDGTiACyNl~f 294 (1081)
T KOG1538|consen 246 LSLFTRDG-VRL-GTVGEQ--DSWIWTVQAKPNSQYVVVGCQDGTIACYNLIF 294 (1081)
T ss_pred eEEEeecC-eEE-eecccc--ceeEEEEEEccCCceEEEEEccCeeehhhhHH
Confidence 99996443 221 222332 4679999999999988876 88887777643
|
|
| >KOG1587|consensus | Back alignment and domain information |
|---|
Probab=99.62 E-value=5e-14 Score=138.17 Aligned_cols=229 Identities=13% Similarity=0.154 Sum_probs=165.9
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeE--EEE----ecCCCCceE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEA--LTV----IDCHPDVIN 223 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~--~~~----~~~h~~~v~ 223 (494)
.+.||++.... .+...+. -...|.|+.|+|..++++|.|..+|.|.+||++.+.. ... ...|..+++
T Consensus 223 ~~~vW~~~~p~------~Pe~~~~-~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~ 295 (555)
T KOG1587|consen 223 VLLVWSLKNPN------TPELVLE-SPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVT 295 (555)
T ss_pred eEEEEecCCCC------CceEEEe-cCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeE
Confidence 58999998772 4444444 4578999999999999999999999999999987654 222 235899999
Q ss_pred EEEEcCCCC--EEEEEeCCCeEEEEeCCCCce-E----EEeee------cCCCCceEEEEECCCCeEEEEEecCCCCceE
Q psy14130 224 CLSFNRDGS--RLVTTCKDKTVRVLDPRTGLV-I----SQGVC------HPGTRSSKAVFIGDTGRIVTTGFSRHSDRQV 290 (494)
Q Consensus 224 ~l~~~~~~~--~l~s~~~d~~v~iwd~~~~~~-~----~~~~~------~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i 290 (494)
.+.|..+-. -+++++.||.|..|+++.-.. . ..... +....+..+.|.+.....+.+| +++|.|
T Consensus 296 ~vvW~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVG---Te~G~v 372 (555)
T KOG1587|consen 296 AVVWLQNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVG---TEEGKV 372 (555)
T ss_pred EEEEeccCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEE---cCCcEE
Confidence 999987544 499999999999998875431 1 01111 2223368889999888899999 899998
Q ss_pred EEEeCCCCCCce------eEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEee-CCCceEEecccccCCCCeeEEE
Q psy14130 291 GLWDENDLNTPL------ALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELT-NERPYIHFLNQSLSGAPQRGLG 363 (494)
Q Consensus 291 ~iwd~~~~~~~~------~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~-~~~~~~~~~~~~~~~~~v~~~~ 363 (494)
.--+........ ......|.+.|.++.++|-+..+|++++ |.++++|... ...|+..+ ..+...+.+++
T Consensus 373 ~~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~g-DW~vriWs~~~~~~Pl~~~---~~~~~~v~~va 448 (555)
T KOG1587|consen 373 YKGCRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVG-DWTVRIWSEDVIASPLLSL---DSSPDYVTDVA 448 (555)
T ss_pred EEEeccCCcccccccccccccccccCcceEeeecCCCccceeeeec-cceeEeccccCCCCcchhh---hhccceeeeeE
Confidence 874433222211 1122346688999999999998877775 9999999988 55554222 22345699999
Q ss_pred EecCCce-eee--ccceeEEEEeeCCCCeEEEeE
Q psy14130 364 FMPKRGC-DVT--QCEIFRFFKLHTTRNMCEPIS 394 (494)
Q Consensus 364 ~~p~~~~-~~~--~~~~~~~~~l~~~~~~~~~~~ 394 (494)
|||.+.. +++ .+|.+.+|||.. +..+|+.
T Consensus 449 WSptrpavF~~~d~~G~l~iWDLl~--~~~~Pv~ 480 (555)
T KOG1587|consen 449 WSPTRPAVFATVDGDGNLDIWDLLQ--DDEEPVL 480 (555)
T ss_pred EcCcCceEEEEEcCCCceehhhhhc--cccCCcc
Confidence 9998753 333 489999999987 3455554
|
|
| >KOG1310|consensus | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.3e-14 Score=135.14 Aligned_cols=174 Identities=17% Similarity=0.274 Sum_probs=123.8
Q ss_pred cccccEEEEEEcCCC-CCEEEEEeCCCeEEEEECCCC----------eEEEEecCCCCceEEEEEcCCC-CEEEEEeCCC
Q psy14130 174 GHKRRVGYIEWHPTA-ENVVASAGFDYLIILWDVGKG----------EALTVIDCHPDVINCLSFNRDG-SRLVTTCKDK 241 (494)
Q Consensus 174 ~h~~~V~~~~~~p~~-~~~l~s~s~d~~v~iwd~~~~----------~~~~~~~~h~~~v~~l~~~~~~-~~l~s~~~d~ 241 (494)
||...|.++.|-|.. ..+++||+.|..|+++|+... +....+..|...|..|+-.|++ ..+.+++.||
T Consensus 91 gHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDG 170 (758)
T KOG1310|consen 91 GHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDG 170 (758)
T ss_pred ccccceeEEeeeccCCCeEEEeccCcceEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCc
Confidence 499999999998853 368999999999999999741 2345567899999999999988 7899999999
Q ss_pred eEEEEeCCCCc-eEEEeeecC--------CCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCC------------
Q psy14130 242 TVRVLDPRTGL-VISQGVCHP--------GTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNT------------ 300 (494)
Q Consensus 242 ~v~iwd~~~~~-~~~~~~~~~--------~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~------------ 300 (494)
+|+-+|++... +-.....+. -....++..+|....++++| +.|--.++||.|....
T Consensus 171 tirQyDiREph~c~p~~~~~~~l~ny~~~lielk~ltisp~rp~~laVG---gsdpfarLYD~Rr~lks~~s~~~~~~~p 247 (758)
T KOG1310|consen 171 TIRQYDIREPHVCNPDEDCPSILVNYNPQLIELKCLTISPSRPYYLAVG---GSDPFARLYDRRRVLKSFRSDGTMNTCP 247 (758)
T ss_pred ceeeecccCCccCCccccccHHHHHhchhhheeeeeeecCCCCceEEec---CCCchhhhhhhhhhccCCCCCccccCCC
Confidence 99999999743 111111110 01256778889989999999 8999999999542111
Q ss_pred c-----eeEeeecC---C--------CceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecc
Q psy14130 301 P-----LALETVDS---S--------SGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLN 351 (494)
Q Consensus 301 ~-----~~~~~~~~---~--------~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~ 351 (494)
+ ......+| . ..++.+.|+|+|..|+++-+ .-.|+++|+..++....+..
T Consensus 248 p~~~~cv~yf~p~hlkn~~gn~~~~~~~~t~vtfnpNGtElLvs~~-gEhVYlfdvn~~~~~~~y~~ 313 (758)
T KOG1310|consen 248 PKDCRCVRYFSPGHLKNSQGNLDRYITCCTYVTFNPNGTELLVSWG-GEHVYLFDVNEDKSPTPYFL 313 (758)
T ss_pred CcccchhheecCccccCcccccccceeeeEEEEECCCCcEEEEeeC-CeEEEEEeecCCCCceeecC
Confidence 1 00000011 0 12456899999999966654 44799999998876544433
|
|
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.2e-13 Score=136.27 Aligned_cols=208 Identities=17% Similarity=0.207 Sum_probs=141.0
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCC---CeEEEEECCCCeE--EEEecCCCCceE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFD---YLIILWDVGKGEA--LTVIDCHPDVIN 223 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d---~~v~iwd~~~~~~--~~~~~~h~~~v~ 223 (494)
..|.+||.... . .+.+..|...+.+.+|+|+| +.|+.++.+ ..|++||+.+++. +..+.+| ..
T Consensus 184 ~~i~i~d~dg~-------~-~~~lt~~~~~v~~p~wSPDG-~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~---~~ 251 (429)
T PRK01742 184 YEVRVADYDGF-------N-QFIVNRSSQPLMSPAWSPDG-SKLAYVSFENKKSQLVVHDLRSGARKVVASFRGH---NG 251 (429)
T ss_pred EEEEEECCCCC-------C-ceEeccCCCccccceEcCCC-CEEEEEEecCCCcEEEEEeCCCCceEEEecCCCc---cC
Confidence 36899998654 2 34566788889999999999 577776543 4799999988753 3333333 44
Q ss_pred EEEEcCCCCEEEEEe-CCCeEEEE--eCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCC
Q psy14130 224 CLSFNRDGSRLVTTC-KDKTVRVL--DPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNT 300 (494)
Q Consensus 224 ~l~~~~~~~~l~s~~-~d~~v~iw--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~ 300 (494)
.++|+|||+.|+.++ .+|.+.|| |+.+++ ...+..+... .....|+|++..++.++ ..++...||++.....
T Consensus 252 ~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~-~~~~~wSpDG~~i~f~s---~~~g~~~I~~~~~~~~ 326 (429)
T PRK01742 252 APAFSPDGSRLAFASSKDGVLNIYVMGANGGT-PSQLTSGAGN-NTEPSWSPDGQSILFTS---DRSGSPQVYRMSASGG 326 (429)
T ss_pred ceeECCCCCEEEEEEecCCcEEEEEEECCCCC-eEeeccCCCC-cCCEEECCCCCEEEEEE---CCCCCceEEEEECCCC
Confidence 689999999888765 67766555 666665 4445555544 67899999987788777 5678888887653222
Q ss_pred ceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--ccee
Q psy14130 301 PLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIF 378 (494)
Q Consensus 301 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~ 378 (494)
.... ..+. . ..+.|+|||+.|++ .+.+ .+.+||+.+++.. ...... ...+++|+|++..++.. ++..
T Consensus 327 ~~~~--l~~~-~-~~~~~SpDG~~ia~-~~~~-~i~~~Dl~~g~~~-~lt~~~----~~~~~~~sPdG~~i~~~s~~g~~ 395 (429)
T PRK01742 327 GASL--VGGR-G-YSAQISADGKTLVM-INGD-NVVKQDLTSGSTE-VLSSTF----LDESPSISPNGIMIIYSSTQGLG 395 (429)
T ss_pred CeEE--ecCC-C-CCccCCCCCCEEEE-EcCC-CEEEEECCCCCeE-EecCCC----CCCCceECCCCCEEEEEEcCCCc
Confidence 2222 1222 2 45789999999944 4445 4666999888642 222221 23567899999887764 6667
Q ss_pred EEEEee
Q psy14130 379 RFFKLH 384 (494)
Q Consensus 379 ~~~~l~ 384 (494)
++|.+.
T Consensus 396 ~~l~~~ 401 (429)
T PRK01742 396 KVLQLV 401 (429)
T ss_pred eEEEEE
Confidence 777764
|
|
| >KOG1538|consensus | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.2e-13 Score=131.60 Aligned_cols=172 Identities=19% Similarity=0.252 Sum_probs=124.4
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEec---CCCCceEEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVID---CHPDVINCLS 226 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~---~h~~~v~~l~ 226 (494)
..-+|........ .. ....+|.+++|..+| ++|+.|-.||+|.+-+- ++++...++ +..++|.+++
T Consensus 115 dFglWS~~qK~V~--------K~-kss~R~~~CsWtnDG-qylalG~~nGTIsiRNk-~gEek~~I~Rpgg~Nspiwsi~ 183 (1081)
T KOG1538|consen 115 DFGLWSPEQKSVS--------KH-KSSSRIICCSWTNDG-QYLALGMFNGTISIRNK-NGEEKVKIERPGGSNSPIWSIC 183 (1081)
T ss_pred hccccChhhhhHH--------hh-hhheeEEEeeecCCC-cEEEEeccCceEEeecC-CCCcceEEeCCCCCCCCceEEE
Confidence 4667876654221 11 134678899999999 79999999999999875 455444444 4678999999
Q ss_pred EcCCC-----CEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCc
Q psy14130 227 FNRDG-----SRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTP 301 (494)
Q Consensus 227 ~~~~~-----~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~ 301 (494)
|+|.. ..++......++.+|.+. |+.+..-..-. ....++.+.+++..++..| .|+.+++|-... -
T Consensus 184 ~~p~sg~G~~di~aV~DW~qTLSFy~Ls-G~~Igk~r~L~-FdP~CisYf~NGEy~LiGG----sdk~L~~fTR~G-v-- 254 (1081)
T KOG1538|consen 184 WNPSSGEGRNDILAVADWGQTLSFYQLS-GKQIGKDRALN-FDPCCISYFTNGEYILLGG----SDKQLSLFTRDG-V-- 254 (1081)
T ss_pred ecCCCCCCccceEEEEeccceeEEEEec-ceeecccccCC-CCchhheeccCCcEEEEcc----CCCceEEEeecC-e--
Confidence 99952 478888999999999886 44343222111 2257888999977777776 899999996432 2
Q ss_pred eeEeee-cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCC
Q psy14130 302 LALETV-DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNE 343 (494)
Q Consensus 302 ~~~~~~-~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~ 343 (494)
.+... +....|..+...|+++.+ +.|+.||+|-.|++...
T Consensus 255 -rLGTvg~~D~WIWtV~~~PNsQ~v-~~GCqDGTiACyNl~fS 295 (1081)
T KOG1538|consen 255 -RLGTVGEQDSWIWTVQAKPNSQYV-VVGCQDGTIACYNLIFS 295 (1081)
T ss_pred -EEeeccccceeEEEEEEccCCceE-EEEEccCeeehhhhHHh
Confidence 22222 234678999999999999 89999999999998543
|
|
| >KOG4227|consensus | Back alignment and domain information |
|---|
Probab=99.58 E-value=5e-14 Score=126.03 Aligned_cols=201 Identities=15% Similarity=0.146 Sum_probs=150.5
Q ss_pred ceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCC------CeEEEEec-CCCCceEEEEEcCCCCEEEEEeCC
Q psy14130 168 WIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGK------GEALTVID-CHPDVINCLSFNRDGSRLVTTCKD 240 (494)
Q Consensus 168 ~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~------~~~~~~~~-~h~~~v~~l~~~~~~~~l~s~~~d 240 (494)
+.+.+.+|.+.|+++.|+.++ ++||+|+.|..+++|.+.. .+++.... .|...|.|++|+...+++++|..+
T Consensus 48 ~qKD~~~H~GCiNAlqFS~N~-~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~ 126 (609)
T KOG4227|consen 48 CQKDVREHTGCINALQFSHND-RFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERW 126 (609)
T ss_pred hhhhhhhhccccceeeeccCC-eEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCc
Confidence 345678899999999999997 7999999999999999853 35555543 366899999999999999999999
Q ss_pred CeEEEEeCCCCceEEEeeecC-CCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee-cCCCceEEeEE
Q psy14130 241 KTVRVLDPRTGLVISQGVCHP-GTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV-DSSSGVLFPYY 318 (494)
Q Consensus 241 ~~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~v~~~~~ 318 (494)
++|...|+.+.+.+..+.... ...+..+..+|.++.++++. .++.|.+||.+....+...... ........+.|
T Consensus 127 ~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t----~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F 202 (609)
T KOG4227|consen 127 GTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVT----RAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEF 202 (609)
T ss_pred ceeEeeecccceeeeeecccCcccceeecccCCCCceEEEEe----cCceEEEEeccCCCCCCceeeecCCCccceeeee
Confidence 999999999988776654322 12378888888855555554 8999999999875534333322 23355677899
Q ss_pred eCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccc---cC-CCCeeEEEEecCCceeee
Q psy14130 319 DHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQS---LS-GAPQRGLGFMPKRGCDVT 373 (494)
Q Consensus 319 ~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~---~~-~~~v~~~~~~p~~~~~~~ 373 (494)
+|....|+++.+..+-+-+||.+...........+ .. ...-.++-|+|.|..+++
T Consensus 203 ~P~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~ms 261 (609)
T KOG4227|consen 203 HPETPALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMS 261 (609)
T ss_pred cCCCceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehh
Confidence 99999998999999999999999764311111111 11 123467889999887665
|
|
| >KOG0322|consensus | Back alignment and domain information |
|---|
Probab=99.58 E-value=7.4e-14 Score=118.83 Aligned_cols=207 Identities=16% Similarity=0.138 Sum_probs=148.6
Q ss_pred cceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEec-CCCCceEEEEEcCCCCEEEEEeCCCeEEE
Q psy14130 167 EWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVID-CHPDVINCLSFNRDGSRLVTTCKDKTVRV 245 (494)
Q Consensus 167 ~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~h~~~v~~l~~~~~~~~l~s~~~d~~v~i 245 (494)
.+...+++|.+.|+++.|..++ .|.+|..-|.|++|++++...+..+. .|...|+.+.--|+ ..+.+-+.|..+.+
T Consensus 5 dP~fvLRp~~~~v~s~~fqa~~--rL~sg~~~G~V~~w~lqt~r~~~~~r~~g~~~it~lq~~p~-d~l~tqgRd~~L~l 81 (323)
T KOG0322|consen 5 DPFFVLRPHSSSVTSVLFQANE--RLMSGLSVGIVKMWVLQTERDLPLIRLFGRLFITNLQSIPN-DSLDTQGRDPLLIL 81 (323)
T ss_pred CCeeEeccccchheehhhccch--hhhcccccceEEEEEeecCccchhhhhhccceeeceeecCC-cchhhcCCCceEEE
Confidence 5677888999999999999986 59999999999999999988888887 57788999999887 56888999999999
Q ss_pred EeCCCCceE--EEe----------eecCC-----------------------CC-----------------ceEEEEE--
Q psy14130 246 LDPRTGLVI--SQG----------VCHPG-----------------------TR-----------------SSKAVFI-- 271 (494)
Q Consensus 246 wd~~~~~~~--~~~----------~~~~~-----------------------~~-----------------~~~~~~~-- 271 (494)
|++.-+.-+ +.+ ..+.+ .. +.+..+.
T Consensus 82 w~ia~s~~i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~ 161 (323)
T KOG0322|consen 82 WTIAYSAFISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQDKDHA 161 (323)
T ss_pred EEccCcceEEEeeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceeeeecccc
Confidence 998653211 000 00000 00 1111111
Q ss_pred CCCCeEEEEEecCCCCceEEEEeCCCCCCceeEe----------------------------------------eec---
Q psy14130 272 GDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALE----------------------------------------TVD--- 308 (494)
Q Consensus 272 ~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~----------------------------------------~~~--- 308 (494)
.....++.+| -++|.+.+||+........+. .+.
T Consensus 162 c~s~~lllaG---yEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~ 238 (323)
T KOG0322|consen 162 CGSTFLLLAG---YESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHST 238 (323)
T ss_pred ccceEEEEEe---ccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeecccc
Confidence 1123477888 489999999988642111100 000
Q ss_pred -----------CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--c
Q psy14130 309 -----------SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--C 375 (494)
Q Consensus 309 -----------~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~ 375 (494)
...++..+..-||++.+ ++++-|+.||+|..++.+++ ..+..| ...|.+++|+|+..+++.+ |
T Consensus 239 gslq~~~e~~lknpGv~gvrIRpD~KIl-ATAGWD~RiRVyswrtl~pL-AVLkyH--sagvn~vAfspd~~lmAaaskD 314 (323)
T KOG0322|consen 239 GSLQIRKEITLKNPGVSGVRIRPDGKIL-ATAGWDHRIRVYSWRTLNPL-AVLKYH--SAGVNAVAFSPDCELMAAASKD 314 (323)
T ss_pred CcccccceEEecCCCccceEEccCCcEE-eecccCCcEEEEEeccCCch-hhhhhh--hcceeEEEeCCCCchhhhccCC
Confidence 12345567778899888 99999999999999999985 334443 4779999999997776664 8
Q ss_pred ceeEEEEe
Q psy14130 376 EIFRFFKL 383 (494)
Q Consensus 376 ~~~~~~~l 383 (494)
..|-+|+|
T Consensus 315 ~rISLWkL 322 (323)
T KOG0322|consen 315 ARISLWKL 322 (323)
T ss_pred ceEEeeec
Confidence 99999986
|
|
| >KOG0642|consensus | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.1e-14 Score=134.40 Aligned_cols=167 Identities=16% Similarity=0.136 Sum_probs=114.0
Q ss_pred ecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecC--CCCceEEEEEcCCC-CEEEEEeCCCeEEEEe
Q psy14130 171 DLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDC--HPDVINCLSFNRDG-SRLVTTCKDKTVRVLD 247 (494)
Q Consensus 171 ~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~--h~~~v~~l~~~~~~-~~l~s~~~d~~v~iwd 247 (494)
.+.||++.|..+++|+.. ..|++++.||+++.|+.....+ .++.. -.+...++.+-... ...++...-+.--++|
T Consensus 391 ~l~Ghtdavw~l~~s~~~-~~Llscs~DgTvr~w~~~~~~~-~~f~~~~e~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~ 468 (577)
T KOG0642|consen 391 TLLGHTDAVWLLALSSTK-DRLLSCSSDGTVRLWEPTEESP-CTFGEPKEHGYPLSVDRTSSRPAHSLASFRFGYTSIDD 468 (577)
T ss_pred ceeccccceeeeeecccc-cceeeecCCceEEeeccCCcCc-cccCCccccCCcceEeeccchhHhhhhhcccccccchh
Confidence 577899999999999997 6899999999999999876655 33432 22344566664332 2222222333333444
Q ss_pred CCCCceEEEeeec------CCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCC
Q psy14130 248 PRTGLVISQGVCH------PGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHD 321 (494)
Q Consensus 248 ~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 321 (494)
......+..+... ....+..+++.|..+..+.. ..|+.|+++|..++..... ...+...+.++++.|+
T Consensus 469 ~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~----hed~~Ir~~dn~~~~~l~s--~~a~~~svtslai~~n 542 (577)
T KOG0642|consen 469 MEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTA----HEDRSIRFFDNKTGKILHS--MVAHKDSVTSLAIDPN 542 (577)
T ss_pred hhhhhheeeccccCCCcccccCccceEEecCCCCeeEec----ccCCceecccccccccchh--eeeccceecceeecCC
Confidence 4444433333211 11236788888886545444 4999999999887654332 2346678999999999
Q ss_pred CCEEEEEEeCCCcEEEEEeeCCCce
Q psy14130 322 TRILFLAGKGDGNIRYYELTNERPY 346 (494)
Q Consensus 322 ~~~l~~~g~~dg~i~~wd~~~~~~~ 346 (494)
|.+| ++|+.||.+++|.+....+.
T Consensus 543 g~~l-~s~s~d~sv~l~kld~k~~~ 566 (577)
T KOG0642|consen 543 GPYL-MSGSHDGSVRLWKLDVKTCV 566 (577)
T ss_pred CceE-EeecCCceeehhhccchhee
Confidence 9999 99999999999999776553
|
|
| >KOG2110|consensus | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.8e-12 Score=114.44 Aligned_cols=197 Identities=15% Similarity=0.209 Sum_probs=144.3
Q ss_pred ccEEEEEEcCCCCCEEEEEeCC--CeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceE
Q psy14130 177 RRVGYIEWHPTAENVVASAGFD--YLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVI 254 (494)
Q Consensus 177 ~~V~~~~~~p~~~~~l~s~s~d--~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~ 254 (494)
..|.-+-|+.. ++|..+.+ +.+++.++..+..+..+. ....|.+|.++. +.|+.+-.+. |.|||+++.+++
T Consensus 47 ~~IvEmLFSSS---LvaiV~~~qpr~Lkv~~~Kk~~~ICe~~-fpt~IL~VrmNr--~RLvV~Lee~-IyIydI~~MklL 119 (391)
T KOG2110|consen 47 VSIVEMLFSSS---LVAIVSIKQPRKLKVVHFKKKTTICEIF-FPTSILAVRMNR--KRLVVCLEES-IYIYDIKDMKLL 119 (391)
T ss_pred eEEEEeecccc---eeEEEecCCCceEEEEEcccCceEEEEe-cCCceEEEEEcc--ceEEEEEccc-EEEEecccceee
Confidence 34555667654 55555444 459999998888777766 667899999974 4566665554 999999999998
Q ss_pred EEeeecCCCCceEEEEECCC-CeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCC
Q psy14130 255 SQGVCHPGTRSSKAVFIGDT-GRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDG 333 (494)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~-~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg 333 (494)
+++..-....--.++++++. +.+++-- +....|.|.+||+.+......+. .|.+.+.+++|+++|.+| +|++..|
T Consensus 120 hTI~t~~~n~~gl~AlS~n~~n~ylAyp-~s~t~GdV~l~d~~nl~~v~~I~--aH~~~lAalafs~~G~ll-ATASeKG 195 (391)
T KOG2110|consen 120 HTIETTPPNPKGLCALSPNNANCYLAYP-GSTTSGDVVLFDTINLQPVNTIN--AHKGPLAALAFSPDGTLL-ATASEKG 195 (391)
T ss_pred hhhhccCCCccceEeeccCCCCceEEec-CCCCCceEEEEEcccceeeeEEE--ecCCceeEEEECCCCCEE-EEeccCc
Confidence 88865522212233444442 2233322 11357899999998865544443 477899999999999999 9999999
Q ss_pred c-EEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 334 N-IRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 334 ~-i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
+ ||||.+.+|+.+.++..+.. ...|.+++|+|+..++.+. .+++.+|+|..
T Consensus 196 TVIRVf~v~~G~kl~eFRRG~~-~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~ 249 (391)
T KOG2110|consen 196 TVIRVFSVPEGQKLYEFRRGTY-PVSIYSLSFSPDSQFLAASSNTETVHIFKLEK 249 (391)
T ss_pred eEEEEEEcCCccEeeeeeCCce-eeEEEEEEECCCCCeEEEecCCCeEEEEEecc
Confidence 8 79999999998877766654 5679999999999988764 89999999987
|
|
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.5e-13 Score=133.98 Aligned_cols=191 Identities=15% Similarity=0.132 Sum_probs=123.0
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEE-EeCCCeEEEE--ECCCCeEEEEecCCCCceEEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVAS-AGFDYLIILW--DVGKGEALTVIDCHPDVINCLS 226 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s-~s~d~~v~iw--d~~~~~~~~~~~~h~~~v~~l~ 226 (494)
+|.+||+.++.. ..+..+.+|. .+++|+|+|. .|+. .+.+|.+.|| |+.+++ ...+..+...+.+..
T Consensus 229 ~i~i~dl~tg~~-----~~l~~~~g~~---~~~~wSPDG~-~La~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~ 298 (429)
T PRK01742 229 QLVVHDLRSGAR-----KVVASFRGHN---GAPAFSPDGS-RLAFASSKDGVLNIYVMGANGGT-PSQLTSGAGNNTEPS 298 (429)
T ss_pred EEEEEeCCCCce-----EEEecCCCcc---CceeECCCCC-EEEEEEecCCcEEEEEEECCCCC-eEeeccCCCCcCCEE
Confidence 589999987632 2233344443 4689999994 5555 4567865555 666555 455666777888999
Q ss_pred EcCCCCEEEEEe-CCCeEEEEeCCCCc-eEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeE
Q psy14130 227 FNRDGSRLVTTC-KDKTVRVLDPRTGL-VISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLAL 304 (494)
Q Consensus 227 ~~~~~~~l~s~~-~d~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~ 304 (494)
|+|||+.|+.++ .++..+||++.... ....+ .+.. ....|+|++..+++++ .++ +.+||+.++......
T Consensus 299 wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l-~~~~---~~~~~SpDG~~ia~~~----~~~-i~~~Dl~~g~~~~lt 369 (429)
T PRK01742 299 WSPDGQSILFTSDRSGSPQVYRMSASGGGASLV-GGRG---YSAQISADGKTLVMIN----GDN-VVKQDLTSGSTEVLS 369 (429)
T ss_pred ECCCCCEEEEEECCCCCceEEEEECCCCCeEEe-cCCC---CCccCCCCCCEEEEEc----CCC-EEEEECCCCCeEEec
Confidence 999999877655 57888888765322 22222 3332 3467899977766666 444 566998875432111
Q ss_pred eeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEee--CCCceEEecccccCCCCeeEEEEecC
Q psy14130 305 ETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELT--NERPYIHFLNQSLSGAPQRGLGFMPK 367 (494)
Q Consensus 305 ~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~--~~~~~~~~~~~~~~~~~v~~~~~~p~ 367 (494)
. . .....+.|+|||++| +.++.++.+.+|++. +++.... +.. +...+...+|+|-
T Consensus 370 ~---~-~~~~~~~~sPdG~~i-~~~s~~g~~~~l~~~~~~G~~~~~-l~~--~~g~~~~p~wsp~ 426 (429)
T PRK01742 370 S---T-FLDESPSISPNGIMI-IYSSTQGLGKVLQLVSADGRFKAR-LPG--SDGQVKFPAWSPY 426 (429)
T ss_pred C---C-CCCCCceECCCCCEE-EEEEcCCCceEEEEEECCCCceEE-ccC--CCCCCCCcccCCC
Confidence 1 1 123567899999999 666678888888874 4554333 332 2456788899885
|
|
| >KOG2321|consensus | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.6e-12 Score=122.21 Aligned_cols=205 Identities=13% Similarity=0.201 Sum_probs=151.0
Q ss_pred eceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCC
Q psy14130 110 DNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAE 189 (494)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~ 189 (494)
..+++.....+..+..++......+. ...|.-++++.| ..+..+.-..+.++++..++..
T Consensus 128 y~~RIP~~GRDm~y~~~scDly~~gs------------g~evYRlNLEqG-------rfL~P~~~~~~~lN~v~in~~h- 187 (703)
T KOG2321|consen 128 YRTRIPKFGRDMKYHKPSCDLYLVGS------------GSEVYRLNLEQG-------RFLNPFETDSGELNVVSINEEH- 187 (703)
T ss_pred eeeecCcCCccccccCCCccEEEeec------------CcceEEEEcccc-------ccccccccccccceeeeecCcc-
Confidence 34566666666666665555443322 235888888888 5555666667899999999997
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEEec------CCCCc-----eEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEee
Q psy14130 190 NVVASAGFDYLIILWDVGKGEALTVID------CHPDV-----INCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGV 258 (494)
Q Consensus 190 ~~l~s~s~d~~v~iwd~~~~~~~~~~~------~h~~~-----v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~ 258 (494)
.+|++|+.||.|..||.++...+.++. .|.+. |+++.|+.+|-.+++|+.+|.+.|||+++.+++..-.
T Consensus 188 gLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kd 267 (703)
T KOG2321|consen 188 GLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKD 267 (703)
T ss_pred ceEEecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecc
Confidence 699999999999999998876655543 34443 9999999999999999999999999999998765544
Q ss_pred ecCCCCceEEEEECCCCe-EEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEE
Q psy14130 259 CHPGTRSSKAVFIGDTGR-IVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRY 337 (494)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~-l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~ 337 (494)
......+..+.|.+.+.. -+++. ....++|||-.++.... .+.....+..+++-|++.++ .++-.++.+..
T Consensus 268 h~~e~pi~~l~~~~~~~q~~v~S~----Dk~~~kiWd~~~Gk~~a---siEpt~~lND~C~~p~sGm~-f~Ane~~~m~~ 339 (703)
T KOG2321|consen 268 HGYELPIKKLDWQDTDQQNKVVSM----DKRILKIWDECTGKPMA---SIEPTSDLNDFCFVPGSGMF-FTANESSKMHT 339 (703)
T ss_pred cCCccceeeecccccCCCceEEec----chHHhhhcccccCCcee---eccccCCcCceeeecCCceE-EEecCCCccee
Confidence 333444788888776333 33333 58899999988766533 33455668899999999988 67778888877
Q ss_pred EEeeC
Q psy14130 338 YELTN 342 (494)
Q Consensus 338 wd~~~ 342 (494)
|=+..
T Consensus 340 yyiP~ 344 (703)
T KOG2321|consen 340 YYIPS 344 (703)
T ss_pred EEccc
Confidence 76654
|
|
| >KOG1334|consensus | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.3e-13 Score=126.87 Aligned_cols=224 Identities=15% Similarity=0.162 Sum_probs=155.0
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEe---cCCCC---ceE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVI---DCHPD---VIN 223 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~---~~h~~---~v~ 223 (494)
+|++=.+...+.. +-...+..|.+.|.-++.-|....-|.|++.|+.+.-.|++++.+...+ ..+.. ..+
T Consensus 210 qvr~s~i~~t~~~----e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~ 285 (559)
T KOG1334|consen 210 QVRVSEILETGYV----ENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLY 285 (559)
T ss_pred ceeeeeeccccce----ecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeee
Confidence 4665554433221 2234566699999999999998899999999999999999887644333 23333 568
Q ss_pred EEEEcCCCC-EEEEEeCCCeEEEEeCCCCc------eEEEeeec-----CCCCceEEEEECCCCeEEEEEecCCCCceEE
Q psy14130 224 CLSFNRDGS-RLVTTCKDKTVRVLDPRTGL------VISQGVCH-----PGTRSSKAVFIGDTGRIVTTGFSRHSDRQVG 291 (494)
Q Consensus 224 ~l~~~~~~~-~l~s~~~d~~v~iwd~~~~~------~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~ 291 (494)
+++.+|... .+++++.|..+++||.+.-. .+.++..| ....|.+++|+.+++.++++= .|-.|+
T Consensus 286 ~Ia~~P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSY----nDe~IY 361 (559)
T KOG1334|consen 286 TIAVDPRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASY----NDEDIY 361 (559)
T ss_pred eEecCCCCccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeee----cccceE
Confidence 899999655 89999999999999987532 12333222 223488999998878888875 688899
Q ss_pred EEeCCC--CCCcee-----------EeeecCCCceEEe-EEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCC
Q psy14130 292 LWDEND--LNTPLA-----------LETVDSSSGVLFP-YYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGA 357 (494)
Q Consensus 292 iwd~~~--~~~~~~-----------~~~~~~~~~v~~~-~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~ 357 (494)
++.-.- +..+.. +........|..+ .|-|..+++ ++|+.-|.|.||+-.+++.+. ++..-. .
T Consensus 362 LF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyV-vSGSDCGhIFiW~K~t~eii~-~MegDr--~ 437 (559)
T KOG1334|consen 362 LFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYV-VSGSDCGHIFIWDKKTGEIIR-FMEGDR--H 437 (559)
T ss_pred EeccccccCCCCCCCcchhhccchhhcccccccccceeeeccCccceE-EecCccceEEEEecchhHHHH-Hhhccc--c
Confidence 995321 111111 1111122334444 467888888 999999999999999988643 222222 2
Q ss_pred CeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 358 PQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 358 ~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
-|.+|-=+|--.++++. +..+|||-...
T Consensus 438 VVNCLEpHP~~PvLAsSGid~DVKIWTP~~ 467 (559)
T KOG1334|consen 438 VVNCLEPHPHLPVLASSGIDHDVKIWTPLT 467 (559)
T ss_pred eEeccCCCCCCchhhccCCccceeeecCCc
Confidence 68899989988888886 89999998643
|
|
| >KOG1272|consensus | Back alignment and domain information |
|---|
Probab=99.55 E-value=7.2e-14 Score=127.81 Aligned_cols=264 Identities=15% Similarity=0.159 Sum_probs=174.9
Q ss_pred ceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccC----cccccccccceeecCCceEEEEEEEecCceEEEEe
Q psy14130 8 PVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNV----PITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLP 83 (494)
Q Consensus 8 ~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~ 83 (494)
+-..+.|+. +|.+|+-|+.-|.|- -++|.+++..+-.+. .-...-+...|+++..+..+.+++..|...-
T Consensus 131 GPY~~~ytr-nGrhlllgGrKGHlA-a~Dw~t~~L~~Ei~v~Etv~Dv~~LHneq~~AVAQK~y~yvYD~~GtElH---- 204 (545)
T KOG1272|consen 131 GPYHLDYTR-NGRHLLLGGRKGHLA-AFDWVTKKLHFEINVMETVRDVTFLHNEQFFAVAQKKYVYVYDNNGTELH---- 204 (545)
T ss_pred CCeeeeecC-CccEEEecCCcccee-eeecccceeeeeeehhhhhhhhhhhcchHHHHhhhhceEEEecCCCcEEe----
Confidence 345678888 899999999999998 788887776553322 2223344555666655555566554332111
Q ss_pred ccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCCC
Q psy14130 84 IHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLSG 163 (494)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~~ 163 (494)
+........-..+=|..+.++.. +..| -++--|+.++
T Consensus 205 ------------------------------Clk~~~~v~rLeFLPyHfLL~~~-~~~G--------~L~Y~DVS~G---- 241 (545)
T KOG1272|consen 205 ------------------------------CLKRHIRVARLEFLPYHFLLVAA-SEAG--------FLKYQDVSTG---- 241 (545)
T ss_pred ------------------------------ehhhcCchhhhcccchhheeeec-ccCC--------ceEEEeechh----
Confidence 11111122222222322222222 2333 4788899999
Q ss_pred CcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeE
Q psy14130 164 NLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTV 243 (494)
Q Consensus 164 ~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v 243 (494)
+.+..+..-.+.+..++-+|-. -++-+|...|+|.+|.....+++..+..|.++|.+|++.++|++++|++.|..+
T Consensus 242 ---klVa~~~t~~G~~~vm~qNP~N-aVih~GhsnGtVSlWSP~skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~ 317 (545)
T KOG1272|consen 242 ---KLVASIRTGAGRTDVMKQNPYN-AVIHLGHSNGTVSLWSPNSKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKV 317 (545)
T ss_pred ---hhhHHHHccCCccchhhcCCcc-ceEEEcCCCceEEecCCCCcchHHHHHhcCCCcceEEECCCCcEEeecccccce
Confidence 4445555567888899999987 599999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEe-CCCC--CCceeEeeecCCCceEEeEEeC
Q psy14130 244 RVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWD-ENDL--NTPLALETVDSSSGVLFPYYDH 320 (494)
Q Consensus 244 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd-~~~~--~~~~~~~~~~~~~~v~~~~~~~ 320 (494)
+|||+|.-..+.++..... ...+.++. ..++++| ....|.||. .-.. ..............|..+.|.|
T Consensus 318 kIWDlR~~~ql~t~~tp~~--a~~ls~Sq--kglLA~~----~G~~v~iw~d~~~~s~~~~~pYm~H~~~~~V~~l~FcP 389 (545)
T KOG1272|consen 318 KIWDLRNFYQLHTYRTPHP--ASNLSLSQ--KGLLALS----YGDHVQIWKDALKGSGHGETPYMNHRCGGPVEDLRFCP 389 (545)
T ss_pred eEeeeccccccceeecCCC--cccccccc--ccceeee----cCCeeeeehhhhcCCCCCCcchhhhccCcccccceecc
Confidence 9999998876666554222 45566654 3577777 567899995 2221 1111111222335788899999
Q ss_pred CCCEEEEEEeCCC
Q psy14130 321 DTRILFLAGKGDG 333 (494)
Q Consensus 321 ~~~~l~~~g~~dg 333 (494)
-...| -.|-..|
T Consensus 390 ~EDvL-GIGH~~G 401 (545)
T KOG1272|consen 390 YEDVL-GIGHAGG 401 (545)
T ss_pred HHHee-eccccCC
Confidence 76665 4443333
|
|
| >KOG1523|consensus | Back alignment and domain information |
|---|
Probab=99.55 E-value=6.5e-13 Score=116.26 Aligned_cols=204 Identities=13% Similarity=0.160 Sum_probs=156.3
Q ss_pred ccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe---EEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy14130 175 HKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE---ALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTG 251 (494)
Q Consensus 175 h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~---~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~ 251 (494)
-..+|+|.+|+++. +.+|.+-....|.|+.....+ ...+++.|...|+.|+|+|..+.|++|+.|+.-++|....+
T Consensus 9 ~~~pitchAwn~dr-t~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~ 87 (361)
T KOG1523|consen 9 LLEPITCHAWNSDR-TQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSG 87 (361)
T ss_pred ccCceeeeeecCCC-ceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCC
Confidence 34689999999998 799999999999999886554 67889999999999999999999999999999999998433
Q ss_pred -c--eEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCcee--EeeecCCCceEEeEEeCCCCEEE
Q psy14130 252 -L--VISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLA--LETVDSSSGVLFPYYDHDTRILF 326 (494)
Q Consensus 252 -~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~ 326 (494)
+ +...+..+... ...+.|+|. +..+++| +.-+.|.||=.+....--. .......+.|.++.|+|+.-.|
T Consensus 88 ~~WkptlvLlRiNrA-At~V~WsP~-enkFAVg---Sgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLl- 161 (361)
T KOG1523|consen 88 GTWKPTLVLLRINRA-ATCVKWSPK-ENKFAVG---SGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLL- 161 (361)
T ss_pred CeeccceeEEEeccc-eeeEeecCc-CceEEec---cCccEEEEEEEecccceehhhhhCCccccceeeeeccCCccee-
Confidence 3 45556666666 899999999 6777888 7889999998765332111 1122345679999999998877
Q ss_pred EEEeCCCcEEEEEee-----C---------CCceEEecccc-cCCCCeeEEEEecCCceeee--ccceeEEEEeeC
Q psy14130 327 LAGKGDGNIRYYELT-----N---------ERPYIHFLNQS-LSGAPQRGLGFMPKRGCDVT--QCEIFRFFKLHT 385 (494)
Q Consensus 327 ~~g~~dg~i~~wd~~-----~---------~~~~~~~~~~~-~~~~~v~~~~~~p~~~~~~~--~~~~~~~~~l~~ 385 (494)
++|+.|+..|+|..- . ..++-.++.++ ..++-+.++.|+|.|..++- -|+.+.+-+...
T Consensus 162 aaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~ 237 (361)
T KOG1523|consen 162 AAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAG 237 (361)
T ss_pred cccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCCceEEeecCC
Confidence 999999999998752 1 11222333344 45678999999999987754 377777766554
|
|
| >KOG1517|consensus | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.9e-12 Score=129.62 Aligned_cols=248 Identities=16% Similarity=0.175 Sum_probs=160.1
Q ss_pred eeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCC-CCCCcccceEecccc----cccEEEEEEcCCCCCEEEEEeC
Q psy14130 123 FCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGG-LSGNLNEWIMDLHGH----KRRVGYIEWHPTAENVVASAGF 197 (494)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~-~~~~~~~~~~~~~~h----~~~V~~~~~~p~~~~~l~s~s~ 197 (494)
.+..|..-.++...++.+| .|+||+--... ....+...-..+.++ .+.=.-+.|....+ .|++++.
T Consensus 1115 l~liNe~D~aLlLtas~dG--------vIRIwk~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G-~Ll~tGd 1185 (1387)
T KOG1517|consen 1115 LELINEQDDALLLTASSDG--------VIRIWKDYADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSG-HLLVTGD 1185 (1387)
T ss_pred eeeecccchhheeeeccCc--------eEEEecccccccCCceeEEeeccccccCccCCCCCeeeehhhhCC-eEEecCC
Confidence 3444555555555556665 69999743321 111111111122222 22224567877764 5555555
Q ss_pred CCeEEEEECCCCeEEEEec-CCCCceEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCc---eEEEeeecCCC-CceEEEEE
Q psy14130 198 DYLIILWDVGKGEALTVID-CHPDVINCLSFNR-DGSRLVTTCKDKTVRVLDPRTGL---VISQGVCHPGT-RSSKAVFI 271 (494)
Q Consensus 198 d~~v~iwd~~~~~~~~~~~-~h~~~v~~l~~~~-~~~~l~s~~~d~~v~iwd~~~~~---~~~~~~~~~~~-~~~~~~~~ 271 (494)
-..|+|||......+..+. +....|+++.-+- .|+.++.|..||.||+||.|... .+.....|+.. .+..+.+.
T Consensus 1186 ~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq 1265 (1387)
T KOG1517|consen 1186 VRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQ 1265 (1387)
T ss_pred eeEEEEEecccceeEeecccCCCccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEee
Confidence 7899999998877776664 3455677766544 47899999999999999998654 46666667643 26777777
Q ss_pred CCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecC----CCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCce-
Q psy14130 272 GDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDS----SSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPY- 346 (494)
Q Consensus 272 ~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~- 346 (494)
+.+-.-+++| +.+|.|++||+|.... .....+.. .+..+++..+++...+ ++|+. +.|.||++...+.-
T Consensus 1266 ~~G~~elvSg---s~~G~I~~~DlR~~~~-e~~~~iv~~~~yGs~lTal~VH~hapii-AsGs~-q~ikIy~~~G~~l~~ 1339 (1387)
T KOG1517|consen 1266 RQGLGELVSG---SQDGDIQLLDLRMSSK-ETFLTIVAHWEYGSALTALTVHEHAPII-ASGSA-QLIKIYSLSGEQLNI 1339 (1387)
T ss_pred cCCCcceeee---ccCCeEEEEecccCcc-cccceeeeccccCccceeeeeccCCCee-eecCc-ceEEEEecChhhhcc
Confidence 7654445666 6999999999997321 11111111 2348899999999888 99988 99999999765421
Q ss_pred EEecccc--cCCCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 347 IHFLNQS--LSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 347 ~~~~~~~--~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
.+.-..+ .....+.+++|+|-..+++.+ |..+.+|....
T Consensus 1340 ~k~n~~F~~q~~gs~scL~FHP~~~llAaG~~Ds~V~iYs~~k 1382 (1387)
T KOG1517|consen 1340 IKYNPGFMGQRIGSVSCLAFHPHRLLLAAGSADSTVSIYSCEK 1382 (1387)
T ss_pred cccCcccccCcCCCcceeeecchhHhhhhccCCceEEEeecCC
Confidence 1111111 123567999999999988886 88999987654
|
|
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.4e-12 Score=113.20 Aligned_cols=154 Identities=15% Similarity=0.245 Sum_probs=106.6
Q ss_pred EEEEEcCCCCCEEEEEeC---------CCeEEEEECCC-CeEEEEecC-CCCceEEEEEcCCCCEEEEE--eCCCeEEEE
Q psy14130 180 GYIEWHPTAENVVASAGF---------DYLIILWDVGK-GEALTVIDC-HPDVINCLSFNRDGSRLVTT--CKDKTVRVL 246 (494)
Q Consensus 180 ~~~~~~p~~~~~l~s~s~---------d~~v~iwd~~~-~~~~~~~~~-h~~~v~~l~~~~~~~~l~s~--~~d~~v~iw 246 (494)
..+.|+|+|..+++.... -+...+|.++. +.....+.- ..++|.+++|+|+|+.|+.. ..++.|.+|
T Consensus 9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~ly 88 (194)
T PF08662_consen 9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLY 88 (194)
T ss_pred EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEE
Confidence 467899999666655552 13345555532 233444432 34579999999999987654 457899999
Q ss_pred eCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEE
Q psy14130 247 DPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILF 326 (494)
Q Consensus 247 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 326 (494)
|++ ++.+..+. ... ...+.|+|++..++++|+. ...|.|.+||.++... +... .+..+..++|+|||++++
T Consensus 89 d~~-~~~i~~~~--~~~-~n~i~wsP~G~~l~~~g~~-n~~G~l~~wd~~~~~~---i~~~-~~~~~t~~~WsPdGr~~~ 159 (194)
T PF08662_consen 89 DVK-GKKIFSFG--TQP-RNTISWSPDGRFLVLAGFG-NLNGDLEFWDVRKKKK---ISTF-EHSDATDVEWSPDGRYLA 159 (194)
T ss_pred cCc-ccEeEeec--CCC-ceEEEECCCCCEEEEEEcc-CCCcEEEEEECCCCEE---eecc-ccCcEEEEEEcCCCCEEE
Confidence 997 66666664 333 6789999997777777742 3357899999985433 2222 234578899999999995
Q ss_pred EEEe-----CCCcEEEEEeeC
Q psy14130 327 LAGK-----GDGNIRYYELTN 342 (494)
Q Consensus 327 ~~g~-----~dg~i~~wd~~~ 342 (494)
.+.+ .|+.++||++..
T Consensus 160 ta~t~~r~~~dng~~Iw~~~G 180 (194)
T PF08662_consen 160 TATTSPRLRVDNGFKIWSFQG 180 (194)
T ss_pred EEEeccceeccccEEEEEecC
Confidence 5554 388999999964
|
|
| >KOG0644|consensus | Back alignment and domain information |
|---|
Probab=99.52 E-value=7.1e-15 Score=143.17 Aligned_cols=205 Identities=18% Similarity=0.242 Sum_probs=154.0
Q ss_pred ceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEe
Q psy14130 168 WIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLD 247 (494)
Q Consensus 168 ~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd 247 (494)
.+..+.||...|+|+.|...| .++++|+.|..++||..+++.++....||.+.|+.++.+.+..+++++|.|..|++|-
T Consensus 182 ~ikrLlgH~naVyca~fDrtg-~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWr 260 (1113)
T KOG0644|consen 182 NIKRLLGHRNAVYCAIFDRTG-RYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWR 260 (1113)
T ss_pred HHHHHHhhhhheeeeeecccc-ceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEe
Confidence 455778999999999999999 7999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCC-CCCC----ceeEe-----------------
Q psy14130 248 PRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEN-DLNT----PLALE----------------- 305 (494)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~-~~~~----~~~~~----------------- 305 (494)
+..+.++..+.+|++. ++.++|+|-. ++ +.||++++||.+ .... |....
T Consensus 261 l~~~~pvsvLrghtga-vtaiafsP~~----ss----s~dgt~~~wd~r~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f 331 (1113)
T KOG0644|consen 261 LPDGAPVSVLRGHTGA-VTAIAFSPRA----SS----SDDGTCRIWDARLEPRIYVPRPLKFTEKDLVDSILFENNGDRF 331 (1113)
T ss_pred cCCCchHHHHhccccc-eeeeccCccc----cC----CCCCceEeccccccccccCCCCCCcccccceeeeecccccccc
Confidence 9999999999999999 9999999873 33 489999999987 1100 00000
Q ss_pred -e--ecCC---CceEEeEEe----------CCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCc
Q psy14130 306 -T--VDSS---SGVLFPYYD----------HDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRG 369 (494)
Q Consensus 306 -~--~~~~---~~v~~~~~~----------~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ 369 (494)
. -+.. ....+++|. .|...+.++.-.+-.+++|++.++.. .+.+.. +...+..+.++|-..
T Consensus 332 ~Tgs~d~ea~n~e~~~l~~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l-~H~l~g--hsd~~yvLd~Hpfn~ 408 (1113)
T KOG0644|consen 332 LTGSRDGEARNHEFEQLAWRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQL-LHNLMG--HSDEVYVLDVHPFNP 408 (1113)
T ss_pred ccccCCcccccchhhHhhhhccceEEEeccccccccceeeeeeeEeeeeecccchh-hhhhcc--cccceeeeeecCCCc
Confidence 0 0000 011112222 22222223344456678888888764 233333 356788899999766
Q ss_pred eeeec---cceeEEEEeeC
Q psy14130 370 CDVTQ---CEIFRFFKLHT 385 (494)
Q Consensus 370 ~~~~~---~~~~~~~~l~~ 385 (494)
.++.. |+..-||+++.
T Consensus 409 ri~msag~dgst~iwdi~e 427 (1113)
T KOG0644|consen 409 RIAMSAGYDGSTIIWDIWE 427 (1113)
T ss_pred HhhhhccCCCceEeeeccc
Confidence 55543 99999999988
|
|
| >KOG1240|consensus | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.4e-12 Score=130.83 Aligned_cols=164 Identities=15% Similarity=0.091 Sum_probs=112.5
Q ss_pred EEEEEEcCCCCC-EEEEEeCCCeEEEEECCCCeEEEEec--CCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEE
Q psy14130 179 VGYIEWHPTAEN-VVASAGFDYLIILWDVGKGEALTVID--CHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVIS 255 (494)
Q Consensus 179 V~~~~~~p~~~~-~l~s~s~d~~v~iwd~~~~~~~~~~~--~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~ 255 (494)
|..-+|...... .|+.+..-+.|..||++......+++ ...+.|++++.+|.+..+++|+..|.+.+||+|=+.++.
T Consensus 1152 v~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~ 1231 (1431)
T KOG1240|consen 1152 VSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPIL 1231 (1431)
T ss_pred EEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCccccceeEEEecCCceEEEEecCCceEEEEEeecCceee
Confidence 444445443334 78888888999999998776555544 345789999999999999999999999999999888887
Q ss_pred EeeecCCCCceEEEEECCC---CeEEEEEecCCCCceEEEEeCCCCCCceeEeee-----------------cCCCceEE
Q psy14130 256 QGVCHPGTRSSKAVFIGDT---GRIVTTGFSRHSDRQVGLWDENDLNTPLALETV-----------------DSSSGVLF 315 (494)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~---~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~-----------------~~~~~v~~ 315 (494)
.+.......+..+..++-. ...+++|+ +..+.|.+|++.++.....+... .+.-....
T Consensus 1232 sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~--~~~nevs~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~ 1309 (1431)
T KOG1240|consen 1232 SWEHPARAPIRHVWLCPTYPQESVSVSAGS--SSNNEVSTWNMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGIS 1309 (1431)
T ss_pred cccCcccCCcceEEeeccCCCCceEEEecc--cCCCceeeeecccCcceEEEEcCCCCcchhhhcccccCCCCCccccee
Confidence 7765444446666665542 35666662 26889999999876544333221 00111112
Q ss_pred eEEeCCCCEEEEEEeCCCcEEEEEeeCCCc
Q psy14130 316 PYYDHDTRILFLAGKGDGNIRYYELTNERP 345 (494)
Q Consensus 316 ~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~ 345 (494)
..+. +++-++++|+.|..|+.||....+.
T Consensus 1310 ~~~~-~~~~~~ltggsd~kIR~wD~~~p~~ 1338 (1431)
T KOG1240|consen 1310 CGVC-EKNGFLLTGGSDMKIRKWDPTRPEI 1338 (1431)
T ss_pred eecc-cCCceeeecCCccceeeccCCCccc
Confidence 2232 3333448999999999999887653
|
|
| >KOG1524|consensus | Back alignment and domain information |
|---|
Probab=99.52 E-value=5.6e-13 Score=124.10 Aligned_cols=178 Identities=14% Similarity=0.197 Sum_probs=137.1
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEE
Q psy14130 190 NVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAV 269 (494)
Q Consensus 190 ~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 269 (494)
..|+.++.||.+.+.+- .++....+..|.+.+.+-.|+|||.-|++++.||.|++|. ++|-+..++.....+ +.+++
T Consensus 76 d~~~i~s~DGkf~il~k-~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWS-rsGMLRStl~Q~~~~-v~c~~ 152 (737)
T KOG1524|consen 76 DTLLICSNDGRFVILNK-SARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWS-RSGMLRSTVVQNEES-IRCAR 152 (737)
T ss_pred ceEEEEcCCceEEEecc-cchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEe-ccchHHHHHhhcCce-eEEEE
Confidence 46888889999998874 5677778889999999999999999999999999999998 456544444333334 89999
Q ss_pred EECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEe
Q psy14130 270 FIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHF 349 (494)
Q Consensus 270 ~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~ 349 (494)
|.|+.+.++.+. .+.+.|=.+.....+.... .|.+-|.++.|++....+ ++|++|-..++||-.....
T Consensus 153 W~p~S~~vl~c~-----g~h~~IKpL~~n~k~i~Wk--AHDGiiL~~~W~~~s~lI-~sgGED~kfKvWD~~G~~L---- 220 (737)
T KOG1524|consen 153 WAPNSNSIVFCQ-----GGHISIKPLAANSKIIRWR--AHDGLVLSLSWSTQSNII-ASGGEDFRFKIWDAQGANL---- 220 (737)
T ss_pred ECCCCCceEEec-----CCeEEEeecccccceeEEe--ccCcEEEEeecCccccce-eecCCceeEEeecccCccc----
Confidence 999988888876 5666666665544444433 466789999999999988 9999999999999765432
Q ss_pred cccccCCCCeeEEEEecCCceeeeccceeEEEE
Q psy14130 350 LNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFK 382 (494)
Q Consensus 350 ~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~ 382 (494)
.....+..+|++++|.|+..+++-+-.+.|+=+
T Consensus 221 f~S~~~ey~ITSva~npd~~~~v~S~nt~R~~~ 253 (737)
T KOG1524|consen 221 FTSAAEEYAITSVAFNPEKDYLLWSYNTARFSS 253 (737)
T ss_pred ccCChhccceeeeeeccccceeeeeeeeeeecC
Confidence 233345688999999999666665556666433
|
|
| >KOG0771|consensus | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.7e-12 Score=117.92 Aligned_cols=180 Identities=19% Similarity=0.230 Sum_probs=136.1
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEec--CCCCceEEE
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVID--CHPDVINCL 225 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~--~h~~~v~~l 225 (494)
++.+|||+.+.. ..+.....|.+.|.++.|+|+| .+|++-+.| ..+||+.+++..+.... ........+
T Consensus 165 dg~lRv~~~Ps~-------~t~l~e~~~~~eV~DL~FS~dg-k~lasig~d-~~~VW~~~~g~~~a~~t~~~k~~~~~~c 235 (398)
T KOG0771|consen 165 DGTLRVWEWPSM-------LTILEEIAHHAEVKDLDFSPDG-KFLASIGAD-SARVWSVNTGAALARKTPFSKDEMFSSC 235 (398)
T ss_pred cceEEEEecCcc-------hhhhhhHhhcCccccceeCCCC-cEEEEecCC-ceEEEEeccCchhhhcCCcccchhhhhc
Confidence 557999998877 4555667799999999999999 699999999 89999999997766654 234556778
Q ss_pred EEcCCC-----CEEEEEeCCCeEEEEeCCCCce------EEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEe
Q psy14130 226 SFNRDG-----SRLVTTCKDKTVRVLDPRTGLV------ISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWD 294 (494)
Q Consensus 226 ~~~~~~-----~~l~s~~~d~~v~iwd~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd 294 (494)
.|+.|+ ..++....-+.|+.||+...+. .+....+.+ ++++..+.+ +++++.| +.||.|.|++
T Consensus 236 RF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~s--iSsl~VS~d-Gkf~AlG---T~dGsVai~~ 309 (398)
T KOG0771|consen 236 RFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKS--ISSLAVSDD-GKFLALG---TMDGSVAIYD 309 (398)
T ss_pred eecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCc--ceeEEEcCC-CcEEEEe---ccCCcEEEEE
Confidence 888877 3444445567788877654331 122222322 788888877 8899999 8999999999
Q ss_pred CCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCC
Q psy14130 295 ENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNER 344 (494)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~ 344 (494)
..+.+.... ....|..-|+.+.|+||.+++ ++-+.|..+.+..+.-.+
T Consensus 310 ~~~lq~~~~-vk~aH~~~VT~ltF~Pdsr~~-~svSs~~~~~v~~l~vd~ 357 (398)
T KOG0771|consen 310 AKSLQRLQY-VKEAHLGFVTGLTFSPDSRYL-ASVSSDNEAAVTKLAVDK 357 (398)
T ss_pred eceeeeeEe-ehhhheeeeeeEEEcCCcCcc-cccccCCceeEEEEeecc
Confidence 887654333 333466789999999999999 888899999998887643
|
|
| >KOG2321|consensus | Back alignment and domain information |
|---|
Probab=99.52 E-value=4.8e-13 Score=125.56 Aligned_cols=220 Identities=17% Similarity=0.233 Sum_probs=157.9
Q ss_pred cCcEEEEEcCCCCCCCCcc------------------cceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC
Q psy14130 148 IHRVKLWYIPDGGLSGNLN------------------EWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKG 209 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~------------------~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~ 209 (494)
.+.|+||++..+.....+. +.++.+ +|...-+.|..+|+|..++|||..--.|++||+..-
T Consensus 6 ~NdVkiYnvS~~kslP~Wls~r~kR~lkkd~~~~~rieLiQdf-e~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanL 84 (703)
T KOG2321|consen 6 VNDVKIYNVSAGKSLPDWLSDRRKRQLKKDVDYRQRIELIQDF-EMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANL 84 (703)
T ss_pred cCceEEEEeecCCCchhhhhhHHHHHHhhchHHHHHHHHHHhc-CCccccceeEecCCCcEEEEecccCCceEEEEcccc
Confidence 3468999987664432211 112233 377778899999999888999999999999998321
Q ss_pred e-------------------------------------------------------------------------------
Q psy14130 210 E------------------------------------------------------------------------------- 210 (494)
Q Consensus 210 ~------------------------------------------------------------------------------- 210 (494)
.
T Consensus 85 SLKFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak~G~hy~~RIP~~GRDm~y~~~scDly~~gsg~evYRlNLEq 164 (703)
T KOG2321|consen 85 SLKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAKYGRHYRTRIPKFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQ 164 (703)
T ss_pred eeeeeecccccceeEEEeccchhhheEeecCceeeehhhcCeeeeeecCcCCccccccCCCccEEEeecCcceEEEEccc
Confidence 1
Q ss_pred --EEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCC----------CCceEEEEECCCCeEE
Q psy14130 211 --ALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPG----------TRSSKAVFIGDTGRIV 278 (494)
Q Consensus 211 --~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~l~ 278 (494)
-+..+....+.++++..++-..+|++|+.+|.|.+||.+....+..+..... ..++.+.|..+ +.-+
T Consensus 165 GrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~-gL~~ 243 (703)
T KOG2321|consen 165 GRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDD-GLHV 243 (703)
T ss_pred cccccccccccccceeeeecCccceEEecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCC-ceeE
Confidence 0111111225688888999888999999999999999998876666543222 23788888877 8889
Q ss_pred EEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCC--CEEEEEEeCCCcEEEEEeeCCCceEEecccccCC
Q psy14130 279 TTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDT--RILFLAGKGDGNIRYYELTNERPYIHFLNQSLSG 356 (494)
Q Consensus 279 ~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~ 356 (494)
++| ..+|.|.|||+|+ ..|+........-++..+.|.+.+ ..+ ++ .....++|||-.+|++.... ...
T Consensus 244 aVG---ts~G~v~iyDLRa-~~pl~~kdh~~e~pi~~l~~~~~~~q~~v-~S-~Dk~~~kiWd~~~Gk~~asi----Ept 313 (703)
T KOG2321|consen 244 AVG---TSTGSVLIYDLRA-SKPLLVKDHGYELPIKKLDWQDTDQQNKV-VS-MDKRILKIWDECTGKPMASI----EPT 313 (703)
T ss_pred Eee---ccCCcEEEEEccc-CCceeecccCCccceeeecccccCCCceE-Ee-cchHHhhhcccccCCceeec----ccc
Confidence 999 8999999999998 456666666666788889997753 333 43 35567899999999985333 234
Q ss_pred CCeeEEEEecCCceeeeccceeE
Q psy14130 357 APQRGLGFMPKRGCDVTQCEIFR 379 (494)
Q Consensus 357 ~~v~~~~~~p~~~~~~~~~~~~~ 379 (494)
..+..+|+.|++.++..+.+...
T Consensus 314 ~~lND~C~~p~sGm~f~Ane~~~ 336 (703)
T KOG2321|consen 314 SDLNDFCFVPGSGMFFTANESSK 336 (703)
T ss_pred CCcCceeeecCCceEEEecCCCc
Confidence 56999999999888777644433
|
|
| >KOG1523|consensus | Back alignment and domain information |
|---|
Probab=99.51 E-value=5.3e-12 Score=110.60 Aligned_cols=212 Identities=11% Similarity=0.179 Sum_probs=158.4
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECC-CCe--EEEEecCCCCceEEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVG-KGE--ALTVIDCHPDVINCLS 226 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~-~~~--~~~~~~~h~~~v~~l~ 226 (494)
.|.||......+ .+..+++..|...|+++.|+|.. +.|++|+.|..-++|... .++ +...+..+....+++.
T Consensus 33 evhiy~~~~~~~----w~~~htls~Hd~~vtgvdWap~s-nrIvtcs~drnayVw~~~~~~~WkptlvLlRiNrAAt~V~ 107 (361)
T KOG1523|consen 33 EVHIYSMLGADL----WEPAHTLSEHDKIVTGVDWAPKS-NRIVTCSHDRNAYVWTQPSGGTWKPTLVLLRINRAATCVK 107 (361)
T ss_pred eEEEEEecCCCC----ceeceehhhhCcceeEEeecCCC-CceeEccCCCCccccccCCCCeeccceeEEEeccceeeEe
Confidence 689998776642 26778999999999999999998 799999999999999983 333 4555666899999999
Q ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCce----EEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCC-----C
Q psy14130 227 FNRDGSRLVTTCKDKTVRVLDPRTGLV----ISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEN-----D 297 (494)
Q Consensus 227 ~~~~~~~l~s~~~d~~v~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~-----~ 297 (494)
|+|.++.|++|+.-+.|-||-.+...- .+.-+.+.+. +.++.|+|+ +-++++| +.|+.+++|..- .
T Consensus 108 WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirSt-v~sldWhpn-nVLlaaG---s~D~k~rVfSayIK~Vde 182 (361)
T KOG1523|consen 108 WSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRST-VTSLDWHPN-NVLLAAG---STDGKCRVFSAYIKGVDE 182 (361)
T ss_pred ecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccc-eeeeeccCC-cceeccc---ccCcceeEEEEeeecccc
Confidence 999999999999999999998775441 1122234444 899999998 7899999 899999999732 1
Q ss_pred CCC--------cee--Eeee-cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEec
Q psy14130 298 LNT--------PLA--LETV-DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMP 366 (494)
Q Consensus 298 ~~~--------~~~--~~~~-~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p 366 (494)
... |.- .... ...+.+..+.|+|+|..| +-.+.|+.+.+=|.....+....+.. ..-|..++.|-.
T Consensus 183 kpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~l-awv~Hds~v~~~da~~p~~~v~~~~~--~~lP~ls~~~is 259 (361)
T KOG1523|consen 183 KPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRL-AWVGHDSTVSFVDAAGPSERVQSVAT--AQLPLLSVSWIS 259 (361)
T ss_pred CCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEe-eEecCCCceEEeecCCCchhccchhh--ccCCceeeEeec
Confidence 111 100 0111 344678899999999999 66679999999998877532222222 126788888887
Q ss_pred CCceeeec
Q psy14130 367 KRGCDVTQ 374 (494)
Q Consensus 367 ~~~~~~~~ 374 (494)
+....+.+
T Consensus 260 e~~vv~ag 267 (361)
T KOG1523|consen 260 ENSVVAAG 267 (361)
T ss_pred CCceeecC
Confidence 76666665
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.1e-11 Score=122.18 Aligned_cols=213 Identities=11% Similarity=0.139 Sum_probs=134.6
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCC---CeEEEEECCCCeEEEEecCCCCceEEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFD---YLIILWDVGKGEALTVIDCHPDVINCLS 226 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d---~~v~iwd~~~~~~~~~~~~h~~~v~~l~ 226 (494)
.|.++|.... ....+..+...+.+.+|+|+| +.|+..+.+ ..|.+||+.+++... +....+.+.+..
T Consensus 177 ~L~~~D~dG~--------~~~~l~~~~~~v~~p~wSPDG-~~la~~s~~~~~~~I~~~dl~~g~~~~-l~~~~g~~~~~~ 246 (427)
T PRK02889 177 QLQISDADGQ--------NAQSALSSPEPIISPAWSPDG-TKLAYVSFESKKPVVYVHDLATGRRRV-VANFKGSNSAPA 246 (427)
T ss_pred EEEEECCCCC--------CceEeccCCCCcccceEcCCC-CEEEEEEccCCCcEEEEEECCCCCEEE-eecCCCCccceE
Confidence 4667776432 223445677889999999999 566666542 469999998886543 333445667899
Q ss_pred EcCCCCEEE-EEeCCCeEEEEe--CCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeC--CCCCCc
Q psy14130 227 FNRDGSRLV-TTCKDKTVRVLD--PRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDE--NDLNTP 301 (494)
Q Consensus 227 ~~~~~~~l~-s~~~d~~v~iwd--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~--~~~~~~ 301 (494)
|+|||+.|+ +.+.++...||. +..+. ...+..+... .....|+|++..++.++ ..++...||.+ .+.. .
T Consensus 247 ~SPDG~~la~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~-~~~~~wSpDG~~l~f~s---~~~g~~~Iy~~~~~~g~-~ 320 (427)
T PRK02889 247 WSPDGRTLAVALSRDGNSQIYTVNADGSG-LRRLTQSSGI-DTEPFFSPDGRSIYFTS---DRGGAPQIYRMPASGGA-A 320 (427)
T ss_pred ECCCCCEEEEEEccCCCceEEEEECCCCC-cEECCCCCCC-CcCeEEcCCCCEEEEEe---cCCCCcEEEEEECCCCc-e
Confidence 999999886 567787766665 44444 4455444443 56678999987787776 44555666654 3322 1
Q ss_pred eeEeeecCCCceEEeEEeCCCCEEEEEEeCCC--cEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec---cc
Q psy14130 302 LALETVDSSSGVLFPYYDHDTRILFLAGKGDG--NIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ---CE 376 (494)
Q Consensus 302 ~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg--~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~---~~ 376 (494)
..+. . .......+.|+|||++|+.++..++ .|.+||+.+++. ..+.. ........|+|++..++.. .+
T Consensus 321 ~~lt-~-~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~--~~lt~---~~~~~~p~~spdg~~l~~~~~~~g 393 (427)
T PRK02889 321 QRVT-F-TGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQV--TALTD---TTRDESPSFAPNGRYILYATQQGG 393 (427)
T ss_pred EEEe-c-CCCCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCe--EEccC---CCCccCceECCCCCEEEEEEecCC
Confidence 1121 1 1223346789999999955543333 699999988764 22222 1234678999999877653 33
Q ss_pred eeEEEEeeC
Q psy14130 377 IFRFFKLHT 385 (494)
Q Consensus 377 ~~~~~~l~~ 385 (494)
.-.++-+..
T Consensus 394 ~~~l~~~~~ 402 (427)
T PRK02889 394 RSVLAAVSS 402 (427)
T ss_pred CEEEEEEEC
Confidence 334554443
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=8.2e-12 Score=123.46 Aligned_cols=213 Identities=15% Similarity=0.153 Sum_probs=139.5
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCC---CeEEEEECCCCeEEEEecCCCCceEEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFD---YLIILWDVGKGEALTVIDCHPDVINCLS 226 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d---~~v~iwd~~~~~~~~~~~~h~~~v~~l~ 226 (494)
.|.+||.... ..+.+..|...+.+.+|+|+| +.|+..+.+ ..|.+||+.+++.. .+..+.+...+..
T Consensus 185 ~l~i~D~~g~--------~~~~lt~~~~~v~~p~wSpDg-~~la~~s~~~~~~~l~~~dl~~g~~~-~l~~~~g~~~~~~ 254 (433)
T PRK04922 185 ALQVADSDGY--------NPQTILRSAEPILSPAWSPDG-KKLAYVSFERGRSAIYVQDLATGQRE-LVASFRGINGAPS 254 (433)
T ss_pred EEEEECCCCC--------CceEeecCCCccccccCCCCC-CEEEEEecCCCCcEEEEEECCCCCEE-EeccCCCCccCce
Confidence 5888987543 224455677889999999999 577766633 46999999887653 3333455566889
Q ss_pred EcCCCCEEE-EEeCCC--eEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCc--eEEEEeCCCCCCc
Q psy14130 227 FNRDGSRLV-TTCKDK--TVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDR--QVGLWDENDLNTP 301 (494)
Q Consensus 227 ~~~~~~~l~-s~~~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~--~i~iwd~~~~~~~ 301 (494)
|+|||+.|+ +.+.++ .|.+||+.+++. ..+..+... .....|+|++..++.++ ..++ .|.++|+.+...
T Consensus 255 ~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~-~~lt~~~~~-~~~~~~spDG~~l~f~s---d~~g~~~iy~~dl~~g~~- 328 (433)
T PRK04922 255 FSPDGRRLALTLSRDGNPEIYVMDLGSRQL-TRLTNHFGI-DTEPTWAPDGKSIYFTS---DRGGRPQIYRVAASGGSA- 328 (433)
T ss_pred ECCCCCEEEEEEeCCCCceEEEEECCCCCe-EECccCCCC-ccceEECCCCCEEEEEE---CCCCCceEEEEECCCCCe-
Confidence 999999775 445555 599999998874 344444443 56789999977777776 3444 466677765432
Q ss_pred eeEeeecCCCceEEeEEeCCCCEEEEEEeCCC--cEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec---cc
Q psy14130 302 LALETVDSSSGVLFPYYDHDTRILFLAGKGDG--NIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ---CE 376 (494)
Q Consensus 302 ~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg--~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~---~~ 376 (494)
..+. . .......+.|+|||+.++++...++ .|.+||+.+++.. .+.. .......+|+|+|..++.. .+
T Consensus 329 ~~lt-~-~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~--~Lt~---~~~~~~p~~spdG~~i~~~s~~~g 401 (433)
T PRK04922 329 ERLT-F-QGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR--TLTP---GSLDESPSFAPNGSMVLYATREGG 401 (433)
T ss_pred EEee-c-CCCCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeE--ECCC---CCCCCCceECCCCCEEEEEEecCC
Confidence 2121 1 2223446899999999966544333 5899999887642 2322 2234567999999876553 23
Q ss_pred eeEEEEeeC
Q psy14130 377 IFRFFKLHT 385 (494)
Q Consensus 377 ~~~~~~l~~ 385 (494)
..++|.+..
T Consensus 402 ~~~L~~~~~ 410 (433)
T PRK04922 402 RGVLAAVST 410 (433)
T ss_pred ceEEEEEEC
Confidence 445555544
|
|
| >KOG1272|consensus | Back alignment and domain information |
|---|
Probab=99.50 E-value=6.1e-14 Score=128.27 Aligned_cols=221 Identities=16% Similarity=0.179 Sum_probs=172.0
Q ss_pred CCcEEEEEEcC--cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEec
Q psy14130 139 GGGAFLVLPIH--RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVID 216 (494)
Q Consensus 139 ~~g~~~~~~~~--~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~ 216 (494)
.+|+.++.+.. .|-.+|..++.+ ..++. -...|.++.|-.+. +++|.+- ...+.|||- .|..+..++
T Consensus 139 rnGrhlllgGrKGHlAa~Dw~t~~L-------~~Ei~-v~Etv~Dv~~LHne-q~~AVAQ-K~y~yvYD~-~GtElHClk 207 (545)
T KOG1272|consen 139 RNGRHLLLGGRKGHLAAFDWVTKKL-------HFEIN-VMETVRDVTFLHNE-QFFAVAQ-KKYVYVYDN-NGTELHCLK 207 (545)
T ss_pred CCccEEEecCCccceeeeeccccee-------eeeee-hhhhhhhhhhhcch-HHHHhhh-hceEEEecC-CCcEEeehh
Confidence 44444444433 477788888743 22332 34568899998875 5676664 578999995 678888888
Q ss_pred CCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCC
Q psy14130 217 CHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEN 296 (494)
Q Consensus 217 ~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~ 296 (494)
.| ..|..+.|.|..-+|++++..|.++--|+.+|+.+..+....+. +..+.-+|- +-++-+| ...|+|.+|...
T Consensus 208 ~~-~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~-~~vm~qNP~-NaVih~G---hsnGtVSlWSP~ 281 (545)
T KOG1272|consen 208 RH-IRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGR-TDVMKQNPY-NAVIHLG---HSNGTVSLWSPN 281 (545)
T ss_pred hc-CchhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCc-cchhhcCCc-cceEEEc---CCCceEEecCCC
Confidence 65 67899999999999999999999999999999999988877766 666666666 7788888 799999999987
Q ss_pred CCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccc
Q psy14130 297 DLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCE 376 (494)
Q Consensus 297 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~ 376 (494)
...... ..+.|.++|.+++++++|+++ +|.+.|..++|||+++-..+ ..+....+...++||.+|.+.++-+.
T Consensus 282 skePLv--KiLcH~g~V~siAv~~~G~YM-aTtG~Dr~~kIWDlR~~~ql----~t~~tp~~a~~ls~SqkglLA~~~G~ 354 (545)
T KOG1272|consen 282 SKEPLV--KILCHRGPVSSIAVDRGGRYM-ATTGLDRKVKIWDLRNFYQL----HTYRTPHPASNLSLSQKGLLALSYGD 354 (545)
T ss_pred CcchHH--HHHhcCCCcceEEECCCCcEE-eecccccceeEeeecccccc----ceeecCCCccccccccccceeeecCC
Confidence 644332 234578899999999999999 88889999999999986532 22223567889999999988888889
Q ss_pred eeEEEEe
Q psy14130 377 IFRFFKL 383 (494)
Q Consensus 377 ~~~~~~l 383 (494)
.+.+|.=
T Consensus 355 ~v~iw~d 361 (545)
T KOG1272|consen 355 HVQIWKD 361 (545)
T ss_pred eeeeehh
Confidence 9999963
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.2e-11 Score=119.37 Aligned_cols=203 Identities=14% Similarity=0.206 Sum_probs=136.5
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeC---CCeEEEEECCCCeEEEEecCCCCceEEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGF---DYLIILWDVGKGEALTVIDCHPDVINCLS 226 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~---d~~v~iwd~~~~~~~~~~~~h~~~v~~l~ 226 (494)
.|.++|.... ....+..|...+.+.+|+|+| +.|+..+. +..|.+||+.+++.. .+..+.+.+.+.+
T Consensus 183 ~l~~~d~dg~--------~~~~lt~~~~~v~~p~wSpDG-~~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~~g~~~~~~ 252 (435)
T PRK05137 183 RLAIMDQDGA--------NVRYLTDGSSLVLTPRFSPNR-QEITYMSYANGRPRVYLLDLETGQRE-LVGNFPGMTFAPR 252 (435)
T ss_pred EEEEECCCCC--------CcEEEecCCCCeEeeEECCCC-CEEEEEEecCCCCEEEEEECCCCcEE-EeecCCCcccCcE
Confidence 5888887543 234566788899999999999 56666553 468999999887653 4555667788999
Q ss_pred EcCCCCEEE-EEeCCCe--EEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCcee
Q psy14130 227 FNRDGSRLV-TTCKDKT--VRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLA 303 (494)
Q Consensus 227 ~~~~~~~l~-s~~~d~~--v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~ 303 (494)
|+|||+.|+ +.+.++. |.+||+.+++. ..+..+... .....|+|++..++.+. .+.....|.++|+..... ..
T Consensus 253 ~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~-~~Lt~~~~~-~~~~~~spDG~~i~f~s-~~~g~~~Iy~~d~~g~~~-~~ 328 (435)
T PRK05137 253 FSPDGRKVVMSLSQGGNTDIYTMDLRSGTT-TRLTDSPAI-DTSPSYSPDGSQIVFES-DRSGSPQLYVMNADGSNP-RR 328 (435)
T ss_pred ECCCCCEEEEEEecCCCceEEEEECCCCce-EEccCCCCc-cCceeEcCCCCEEEEEE-CCCCCCeEEEEECCCCCe-EE
Confidence 999999775 5555554 77779987764 445445443 56789999977777665 111234788888765432 22
Q ss_pred EeeecCCCceEEeEEeCCCCEEEEEEeCC--CcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeee
Q psy14130 304 LETVDSSSGVLFPYYDHDTRILFLAGKGD--GNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVT 373 (494)
Q Consensus 304 ~~~~~~~~~v~~~~~~~~~~~l~~~g~~d--g~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~ 373 (494)
+. .....+..+.|+|||+.|+++.... ..|.+||+.++.. ..+.. ...+....|+|||..++.
T Consensus 329 lt--~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~--~~lt~---~~~~~~p~~spDG~~i~~ 393 (435)
T PRK05137 329 IS--FGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSGE--RILTS---GFLVEGPTWAPNGRVIMF 393 (435)
T ss_pred ee--cCCCcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCce--EeccC---CCCCCCCeECCCCCEEEE
Confidence 21 1234456688999999996554333 3577888765542 22221 234678899999987655
|
|
| >KOG3881|consensus | Back alignment and domain information |
|---|
Probab=99.48 E-value=8.1e-12 Score=112.32 Aligned_cols=211 Identities=12% Similarity=0.089 Sum_probs=154.3
Q ss_pred EEEEEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCC--CeEEEEECCCCeEEEEecCC-
Q psy14130 142 AFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFD--YLIILWDVGKGEALTVIDCH- 218 (494)
Q Consensus 142 ~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d--~~v~iwd~~~~~~~~~~~~h- 218 (494)
.++....+.+.+|....+..-. .++..+..+ ..+..|.-++..+.++|+|+.. ..+++||+++.+++.+-+.-
T Consensus 118 Litc~~sG~l~~~~~k~~d~hs---s~l~~la~g-~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvp 193 (412)
T KOG3881|consen 118 LITCVSSGNLQVRHDKSGDLHS---SKLIKLATG-PGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVP 193 (412)
T ss_pred EEEEecCCcEEEEeccCCcccc---ccceeeecC-CceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCC
Confidence 3344455679999998653221 333444433 5577888888887888999998 88999999988665544321
Q ss_pred --------CCceEEEEEcCC--CCEEEEEeCCCeEEEEeCCCCc-eEEEeeecCCCCceEEEEECCCCeEEEEEecCCCC
Q psy14130 219 --------PDVINCLSFNRD--GSRLVTTCKDKTVRVLDPRTGL-VISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSD 287 (494)
Q Consensus 219 --------~~~v~~l~~~~~--~~~l~s~~~d~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d 287 (494)
.-.++++.|-+. ...|++++.-+.+|+||++.++ ++.++...... ++++...|.+ .++.+| ..-
T Consensus 194 nD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~-is~~~l~p~g-n~Iy~g---n~~ 268 (412)
T KOG3881|consen 194 NDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENP-ISSTGLTPSG-NFIYTG---NTK 268 (412)
T ss_pred CccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccCcceeEeccccCc-ceeeeecCCC-cEEEEe---ccc
Confidence 234678999987 8899999999999999999876 78888776666 8888888884 555666 589
Q ss_pred ceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecC
Q psy14130 288 RQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPK 367 (494)
Q Consensus 288 ~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 367 (494)
+.+..||++........ ..+..+++.++..+|..+++ ++++-|..+||+|+.+.+.+.. .-.....+++-+.++
T Consensus 269 g~l~~FD~r~~kl~g~~-~kg~tGsirsih~hp~~~~l-as~GLDRyvRIhD~ktrkll~k----vYvKs~lt~il~~~~ 342 (412)
T KOG3881|consen 269 GQLAKFDLRGGKLLGCG-LKGITGSIRSIHCHPTHPVL-ASCGLDRYVRIHDIKTRKLLHK----VYVKSRLTFILLRDD 342 (412)
T ss_pred chhheecccCceeeccc-cCCccCCcceEEEcCCCceE-EeeccceeEEEeecccchhhhh----hhhhccccEEEecCC
Confidence 99999999986544331 22345789999999999999 9999999999999999654311 111344566666554
|
|
| >KOG1963|consensus | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.2e-11 Score=122.24 Aligned_cols=229 Identities=19% Similarity=0.226 Sum_probs=161.5
Q ss_pred cCCcEEEEEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCC--CEEEEEeCCCeEEEEECCCCeEEEEe
Q psy14130 138 AGGGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAE--NVVASAGFDYLIILWDVGKGEALTVI 215 (494)
Q Consensus 138 ~~~g~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~--~~l~s~s~d~~v~iwd~~~~~~~~~~ 215 (494)
.++..+++...+.|+||...++ +++..+.+|..++..+.+.|..+ .++.+++.||.|++||...+..+.++
T Consensus 26 nD~k~l~~~~~~~V~VyS~~Tg-------~~i~~l~~~~a~l~s~~~~~~~~~~~~~~~~sl~G~I~vwd~~~~~Llkt~ 98 (792)
T KOG1963|consen 26 NDAKFLFLCTGNFVKVYSTATG-------ECITSLEDHTAPLTSVIVLPSSENANYLIVCSLDGTIRVWDWSDGELLKTF 98 (792)
T ss_pred cCCcEEEEeeCCEEEEEecchH-------hhhhhcccccCccceeeecCCCccceEEEEEecCccEEEecCCCcEEEEEE
Confidence 3445566667778999999999 77789999999999999988866 56789999999999999888876665
Q ss_pred cCCCCc----------------------------------------------------------eEEEEEcCCCCEEEEE
Q psy14130 216 DCHPDV----------------------------------------------------------INCLSFNRDGSRLVTT 237 (494)
Q Consensus 216 ~~h~~~----------------------------------------------------------v~~l~~~~~~~~l~s~ 237 (494)
..+... -.++.+++.|.+ ...
T Consensus 99 ~~~~~v~~~~~~~~~a~~s~~~~~s~~~~~~~~~~s~~~~~q~~~~~~~t~~~~~~d~~~~~~~~~~I~~~~~ge~-~~i 177 (792)
T KOG1963|consen 99 DNNLPVHALVYKPAQADISANVYVSVEDYSILTTFSKKLSKQSSRFVLATFDSAKGDFLKEHQEPKSIVDNNSGEF-KGI 177 (792)
T ss_pred ecCCceeEEEechhHhCccceeEeecccceeeeecccccccceeeeEeeeccccchhhhhhhcCCccEEEcCCceE-EEE
Confidence 422100 012222322222 222
Q ss_pred eCCCeEEEEeCCCCce---EEEe-eecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCC--CCC-ceeEeeecCC
Q psy14130 238 CKDKTVRVLDPRTGLV---ISQG-VCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEND--LNT-PLALETVDSS 310 (494)
Q Consensus 238 ~~d~~v~iwd~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~--~~~-~~~~~~~~~~ 310 (494)
..+..+.+|+...... .+.. ..|.-. +.+.+++|. ++++++| ..||+|.+|.--. ... ..+.. .=|+
T Consensus 178 ~~~~~~~~~~v~~~~~~~~~~~~~~~Htf~-~t~~~~spn-~~~~Aa~---d~dGrI~vw~d~~~~~~~~t~t~l-HWH~ 251 (792)
T KOG1963|consen 178 VHMCKIHIYFVPKHTKHTSSRDITVHHTFN-ITCVALSPN-ERYLAAG---DSDGRILVWRDFGSSDDSETCTLL-HWHH 251 (792)
T ss_pred EEeeeEEEEEecccceeeccchhhhhhccc-ceeEEeccc-cceEEEe---ccCCcEEEEeccccccccccceEE-Eecc
Confidence 2344566676665431 0111 123333 577788888 7888888 7999999996322 111 11222 2267
Q ss_pred CceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCcee--eeccceeEEEEeeC
Q psy14130 311 SGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCD--VTQCEIFRFFKLHT 385 (494)
Q Consensus 311 ~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~--~~~~~~~~~~~l~~ 385 (494)
..|.++.|+++|.+| ++|+..|.+.+|.+.+++ .+++..+ +.+|..+.++||+... +.+|..+.+.+...
T Consensus 252 ~~V~~L~fS~~G~~L-lSGG~E~VLv~Wq~~T~~--kqfLPRL--gs~I~~i~vS~ds~~~sl~~~DNqI~li~~~d 323 (792)
T KOG1963|consen 252 DEVNSLSFSSDGAYL-LSGGREGVLVLWQLETGK--KQFLPRL--GSPILHIVVSPDSDLYSLVLEDNQIHLIKASD 323 (792)
T ss_pred cccceeEEecCCceE-eecccceEEEEEeecCCC--ccccccc--CCeeEEEEEcCCCCeEEEEecCceEEEEeccc
Confidence 899999999999999 999999999999999998 5666665 6889999999998754 45788888877643
|
|
| >KOG4497|consensus | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.3e-11 Score=108.48 Aligned_cols=225 Identities=16% Similarity=0.294 Sum_probs=147.7
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcC
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNR 229 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~ 229 (494)
.|.+|++... +....+......+.+++|+|+|..+|.+...|-.|.+|.+.+.+... ++-....+..++|+|
T Consensus 72 ~vqvwsl~Qp-------ew~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~-~~~pK~~~kg~~f~~ 143 (447)
T KOG4497|consen 72 KVQVWSLVQP-------EWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYL-LPHPKTNVKGYAFHP 143 (447)
T ss_pred eEEEEEeecc-------eeEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEE-ecccccCceeEEECC
Confidence 6999999887 66677777888999999999998888999999999999998766433 332345568899999
Q ss_pred CCCEEEEEeC------------------------------------CCeEEEEeCCCCceEEEeeecCCCCceEEEEECC
Q psy14130 230 DGSRLVTTCK------------------------------------DKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGD 273 (494)
Q Consensus 230 ~~~~l~s~~~------------------------------------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (494)
||++.+.++. +..+.+||---.-.+. .-|.+-.+..+.|+|.
T Consensus 144 dg~f~ai~sRrDCkdyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Leykv~--aYe~~lG~k~v~wsP~ 221 (447)
T KOG4497|consen 144 DGQFCAILSRRDCKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYKVY--AYERGLGLKFVEWSPC 221 (447)
T ss_pred CCceeeeeecccHHHHHHHHhhHHHHHHHhcCCCcccccCceECCCCcEEEEecchhhheee--eeeeccceeEEEeccc
Confidence 9998776643 1234445432111222 2233333788899997
Q ss_pred CCeEEEEEecCCCCceEEEEeCCC---------------CC---------C-----------------------------
Q psy14130 274 TGRIVTTGFSRHSDRQVGLWDEND---------------LN---------T----------------------------- 300 (494)
Q Consensus 274 ~~~l~~~g~~~~~d~~i~iwd~~~---------------~~---------~----------------------------- 300 (494)
++++++| +.|+.+|+.+--+ .. .
T Consensus 222 -~qflavG---syD~~lrvlnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE 297 (447)
T KOG4497|consen 222 -NQFLAVG---SYDQMLRVLNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHIWEESETIYE 297 (447)
T ss_pred -cceEEee---ccchhhhhhceeeeeehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCccccCccccchhhhh
Confidence 7899999 7898888754110 00 0
Q ss_pred ----ceeEeee-------cCCCceEEeEEeCCCCEEEEEEeCC---CcEEEEEeeCCCceEEecccccCCCCeeEEEEec
Q psy14130 301 ----PLALETV-------DSSSGVLFPYYDHDTRILFLAGKGD---GNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMP 366 (494)
Q Consensus 301 ----~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~g~~d---g~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p 366 (494)
+..+... ....++-.++|++|..++ ++- .| +.+-+||++.-+.... .....+|+++.|.|
T Consensus 298 ~~~~pv~~~~lkp~tD~pnPk~g~g~lafs~Ds~y~-aTr-nd~~PnalW~Wdlq~l~l~av----LiQk~piraf~WdP 371 (447)
T KOG4497|consen 298 QQMTPVKVHKLKPPTDFPNPKCGAGKLAFSCDSTYA-ATR-NDKYPNALWLWDLQNLKLHAV----LIQKHPIRAFEWDP 371 (447)
T ss_pred hhhcceeeecccCCCCCCCcccccceeeecCCceEE-eee-cCCCCceEEEEechhhhhhhh----hhhccceeEEEeCC
Confidence 0000000 012345678999999887 653 34 4589999998764322 22356899999999
Q ss_pred CCceeee--ccceeEEEEeeCCCCeEEEeEEEeeCC
Q psy14130 367 KRGCDVT--QCEIFRFFKLHTTRNMCEPISMIVPRK 400 (494)
Q Consensus 367 ~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~pr~ 400 (494)
...-++. +...+.+|.... |....+|.+
T Consensus 372 ~~prL~vctg~srLY~W~psg------~~~V~vP~~ 401 (447)
T KOG4497|consen 372 GRPRLVVCTGKSRLYFWAPSG------PRVVGVPKK 401 (447)
T ss_pred CCceEEEEcCCceEEEEcCCC------ceEEecCCC
Confidence 8776655 445555565433 344455554
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.8e-11 Score=121.12 Aligned_cols=197 Identities=16% Similarity=0.135 Sum_probs=129.4
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCe--EEEEECCCCeEEEEecCCCCceEEEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYL--IILWDVGKGEALTVIDCHPDVINCLSF 227 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~--v~iwd~~~~~~~~~~~~h~~~v~~l~~ 227 (494)
.|.+||+.++. . ..+..+.+.+.+.+|+|+|..++++.+.++. |.+||+.+++. ..+..+.....+..|
T Consensus 227 ~i~~~dl~~g~-------~-~~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~-~~Lt~~~~~~~~~~~ 297 (435)
T PRK05137 227 RVYLLDLETGQ-------R-ELVGNFPGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGTT-TRLTDSPAIDTSPSY 297 (435)
T ss_pred EEEEEECCCCc-------E-EEeecCCCcccCcEECCCCCEEEEEEecCCCceEEEEECCCCce-EEccCCCCccCceeE
Confidence 68999998763 2 2344566677889999999655567776665 77789887764 456656667788999
Q ss_pred cCCCCEEEEEeC-C--CeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeE
Q psy14130 228 NRDGSRLVTTCK-D--KTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLAL 304 (494)
Q Consensus 228 ~~~~~~l~s~~~-d--~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~ 304 (494)
+|||+.|+..+. + ..|.++|+..++. ..+..+.+. .....|+|++..++.+.. ...+..|.+||+..... ..
T Consensus 298 spDG~~i~f~s~~~g~~~Iy~~d~~g~~~-~~lt~~~~~-~~~~~~SpdG~~ia~~~~-~~~~~~i~~~d~~~~~~-~~- 372 (435)
T PRK05137 298 SPDGSQIVFESDRSGSPQLYVMNADGSNP-RRISFGGGR-YSTPVWSPRGDLIAFTKQ-GGGQFSIGVMKPDGSGE-RI- 372 (435)
T ss_pred cCCCCEEEEEECCCCCCeEEEEECCCCCe-EEeecCCCc-ccCeEECCCCCEEEEEEc-CCCceEEEEEECCCCce-Ee-
Confidence 999998887764 3 3688889876654 334333333 566789999877777651 11234688889764332 11
Q ss_pred eeecCCCceEEeEEeCCCCEEEEEEeCC-----CcEEEEEeeCCCceEEecccccCCCCeeEEEEecC
Q psy14130 305 ETVDSSSGVLFPYYDHDTRILFLAGKGD-----GNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPK 367 (494)
Q Consensus 305 ~~~~~~~~v~~~~~~~~~~~l~~~g~~d-----g~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 367 (494)
+.....+..+.|+|||+.|+.++... ..+.++|+..+.. ..+.. ...+...+|+|-
T Consensus 373 --lt~~~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~~~--~~l~~---~~~~~~p~Wsp~ 433 (435)
T PRK05137 373 --LTSGFLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTGRNE--REVPT---PGDASDPAWSPL 433 (435)
T ss_pred --ccCCCCCCCCeECCCCCEEEEEEccCCCCCcceEEEEECCCCce--EEccC---CCCccCcccCCC
Confidence 11223466789999999986665433 2577778766543 22221 234566777763
|
|
| >KOG2394|consensus | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.5e-12 Score=119.95 Aligned_cols=95 Identities=21% Similarity=0.302 Sum_probs=87.8
Q ss_pred ccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceE
Q psy14130 175 HKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVI 254 (494)
Q Consensus 175 h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~ 254 (494)
-.+.|+..+|+|+| .+||+.|.||.+||+|..+.+.+..++..-+...|++|+|||++|++|+.|.-|.||.+..++++
T Consensus 289 ~~g~in~f~FS~DG-~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVV 367 (636)
T KOG2394|consen 289 GEGSINEFAFSPDG-KYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVV 367 (636)
T ss_pred ccccccceeEcCCC-ceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEeccceEE
Confidence 34478899999998 79999999999999999998888888888889999999999999999999999999999999999
Q ss_pred EEeeecCCCCceEEEEE
Q psy14130 255 SQGVCHPGTRSSKAVFI 271 (494)
Q Consensus 255 ~~~~~~~~~~~~~~~~~ 271 (494)
..-.+|... +..++|.
T Consensus 368 ARGqGHkSW-Vs~VaFD 383 (636)
T KOG2394|consen 368 ARGQGHKSW-VSVVAFD 383 (636)
T ss_pred Eeccccccc-eeeEeec
Confidence 999999998 8888887
|
|
| >KOG1240|consensus | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.1e-11 Score=126.10 Aligned_cols=214 Identities=15% Similarity=0.165 Sum_probs=154.9
Q ss_pred cceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC-------eEEEEecCCCCceEEEEEcCCCCEEEEEeC
Q psy14130 167 EWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKG-------EALTVIDCHPDVINCLSFNRDGSRLVTTCK 239 (494)
Q Consensus 167 ~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~-------~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~ 239 (494)
..+..+..|...|..++.++....+++|||.||+|++||.+.- +...++......+..+...+.+..+|.++.
T Consensus 1039 ~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t~ 1118 (1431)
T KOG1240|consen 1039 ILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVSTK 1118 (1431)
T ss_pred eEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEEcC
Confidence 3455677799999999998876579999999999999998642 233344445788999999999999999999
Q ss_pred CCeEEEEeCCCC--c-----eEEEeeecCCCCceEEE-EECCCCe-EEEEEecCCCCceEEEEeCCCCCCceeEeeecCC
Q psy14130 240 DKTVRVLDPRTG--L-----VISQGVCHPGTRSSKAV-FIGDTGR-IVTTGFSRHSDRQVGLWDENDLNTPLALETVDSS 310 (494)
Q Consensus 240 d~~v~iwd~~~~--~-----~~~~~~~~~~~~~~~~~-~~~~~~~-l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 310 (494)
||.|++.++... + ..+....+....+.++. +...... .++.+ ...+.|..||++.....-..+....+
T Consensus 1119 DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~---T~~~~iv~~D~r~~~~~w~lk~~~~h 1195 (1431)
T KOG1240|consen 1119 DGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYA---TDLSRIVSWDTRMRHDAWRLKNQLRH 1195 (1431)
T ss_pred CCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEE---EeccceEEecchhhhhHHhhhcCccc
Confidence 999999998762 1 22222333333244432 3332233 55555 47889999999976554444444456
Q ss_pred CceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCC---ceeee----ccceeEEEEe
Q psy14130 311 SGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKR---GCDVT----QCEIFRFFKL 383 (494)
Q Consensus 311 ~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~---~~~~~----~~~~~~~~~l 383 (494)
+.|++++.+|.+.++ +.|...|.+.+||++-+.++... .+....+++.++.+|-. ...++ +...+.+|++
T Consensus 1196 G~vTSi~idp~~~Wl-viGts~G~l~lWDLRF~~~i~sw--~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~ 1272 (1431)
T KOG1240|consen 1196 GLVTSIVIDPWCNWL-VIGTSRGQLVLWDLRFRVPILSW--EHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNM 1272 (1431)
T ss_pred cceeEEEecCCceEE-EEecCCceEEEEEeecCceeecc--cCcccCCcceEEeeccCCCCceEEEecccCCCceeeeec
Confidence 789999999999998 99999999999999988765443 34445788888887743 34443 3667899999
Q ss_pred eCC
Q psy14130 384 HTT 386 (494)
Q Consensus 384 ~~~ 386 (494)
.++
T Consensus 1273 ~~g 1275 (1431)
T KOG1240|consen 1273 ETG 1275 (1431)
T ss_pred ccC
Confidence 873
|
|
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.8e-09 Score=103.38 Aligned_cols=239 Identities=13% Similarity=0.176 Sum_probs=158.0
Q ss_pred cEEEEEcCCC-CCCCCcccceEecccccccEEEEEEcCCCCCEEEEEe-CCCeEEEEECCC-CeEEE---Eec-------
Q psy14130 150 RVKLWYIPDG-GLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAG-FDYLIILWDVGK-GEALT---VID------- 216 (494)
Q Consensus 150 ~v~iw~~~~~-~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s-~d~~v~iwd~~~-~~~~~---~~~------- 216 (494)
.|..|.+... +.. +.+............++++|++ .+|+++. .+|+|.++++.. +.... .+.
T Consensus 63 ~v~~~~i~~~~g~L----~~~~~~~~~g~~p~~i~~~~~g-~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~ 137 (345)
T PF10282_consen 63 GVSSYRIDPDTGTL----TLLNSVPSGGSSPCHIAVDPDG-RFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPN 137 (345)
T ss_dssp EEEEEEEETTTTEE----EEEEEEEESSSCEEEEEECTTS-SEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESS
T ss_pred CEEEEEECCCccee----EEeeeeccCCCCcEEEEEecCC-CEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCc
Confidence 5777777654 111 2333333234455789999998 4665554 589999999986 43322 221
Q ss_pred ---CCCCceEEEEEcCCCCEEEEEe-CCCeEEEEeCCCCc--e--EEEeeecCCCCceEEEEECCCCeEEEEEecCCCCc
Q psy14130 217 ---CHPDVINCLSFNRDGSRLVTTC-KDKTVRVLDPRTGL--V--ISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDR 288 (494)
Q Consensus 217 ---~h~~~v~~l~~~~~~~~l~s~~-~d~~v~iwd~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~ 288 (494)
.-.....++.|+|+|+++++.. ....|.+|++.... + ...+....+.....++|+|++..++++. ..++
T Consensus 138 ~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~---e~s~ 214 (345)
T PF10282_consen 138 PDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVN---ELSN 214 (345)
T ss_dssp TTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEE---TTTT
T ss_pred ccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEec---CCCC
Confidence 1234578899999999888765 34689999997665 3 2344445555578999999988888888 7899
Q ss_pred eEEEEeCCCCC-CceeEeeec-------CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccC-CCCe
Q psy14130 289 QVGLWDENDLN-TPLALETVD-------SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLS-GAPQ 359 (494)
Q Consensus 289 ~i~iwd~~~~~-~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~-~~~v 359 (494)
+|.++++.... ......... .......++++|||++||++...++.|.+|++.........+..... +...
T Consensus 215 ~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~P 294 (345)
T PF10282_consen 215 TVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFP 294 (345)
T ss_dssp EEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSE
T ss_pred cEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCc
Confidence 99999987222 111111111 11256778999999999999999999999999433111334444433 4558
Q ss_pred eEEEEecCCceeeec---cceeEEEEeeCCCCeEEEeEEE
Q psy14130 360 RGLGFMPKRGCDVTQ---CEIFRFFKLHTTRNMCEPISMI 396 (494)
Q Consensus 360 ~~~~~~p~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~~ 396 (494)
+.++++|+|.+++.+ ++.+.+|+++...+.+.++...
T Consensus 295 r~~~~s~~g~~l~Va~~~s~~v~vf~~d~~tG~l~~~~~~ 334 (345)
T PF10282_consen 295 RHFAFSPDGRYLYVANQDSNTVSVFDIDPDTGKLTPVGSS 334 (345)
T ss_dssp EEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEE
T ss_pred cEEEEeCCCCEEEEEecCCCeEEEEEEeCCCCcEEEeccc
Confidence 999999999987764 6789999998655677766643
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >KOG2394|consensus | Back alignment and domain information |
|---|
Probab=99.42 E-value=4e-12 Score=118.63 Aligned_cols=164 Identities=21% Similarity=0.274 Sum_probs=125.6
Q ss_pred ccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCC--------------Ce--------------EEEEecCCCCceEEEE
Q psy14130 175 HKRRVGYIEWHPTAENVVASAGFDYLIILWDVGK--------------GE--------------ALTVIDCHPDVINCLS 226 (494)
Q Consensus 175 h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~--------------~~--------------~~~~~~~h~~~v~~l~ 226 (494)
.+..|+|+.|-|.++.+++.+-.+|.+.++|... +. ++..+.-..+.|...+
T Consensus 218 ~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~ 297 (636)
T KOG2394|consen 218 NKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFA 297 (636)
T ss_pred cccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccceeEecccccccee
Confidence 3478999999998888999999999999997631 11 1112222346789999
Q ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEee
Q psy14130 227 FNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALET 306 (494)
Q Consensus 227 ~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~ 306 (494)
|+|||++||+.+.||.+||||..+.+++..++.--+. ..+++|+|| ++++++| ++|..|.||.+...+ +....
T Consensus 298 FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGG-LLCvcWSPD-GKyIvtG---GEDDLVtVwSf~erR--VVARG 370 (636)
T KOG2394|consen 298 FSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGG-LLCVCWSPD-GKYIVTG---GEDDLVTVWSFEERR--VVARG 370 (636)
T ss_pred EcCCCceEEEEecCceEEEeeccHHHHHHHHHhhccc-eEEEEEcCC-ccEEEec---CCcceEEEEEeccce--EEEec
Confidence 9999999999999999999999998877777666666 899999999 5666666 699999999987533 33344
Q ss_pred ecCCCceEEeEEeCC-----------------------------------------------CCEEEEEEeCCCcEEEEE
Q psy14130 307 VDSSSGVLFPYYDHD-----------------------------------------------TRILFLAGKGDGNIRYYE 339 (494)
Q Consensus 307 ~~~~~~v~~~~~~~~-----------------------------------------------~~~l~~~g~~dg~i~~wd 339 (494)
..|...|..++|+|- -.+-|.+.+.|-.+.+||
T Consensus 371 qGHkSWVs~VaFDpytt~~ee~~~~~~~~~~~~~~~~~~~~r~~~~~S~~~~~~s~~~~~~~v~YRfGSVGqDTqlcLWD 450 (636)
T KOG2394|consen 371 QGHKSWVSVVAFDPYTTSTEEWNNFSGMDSTFSDVAHDFEIRANGTGSAEGCPLSSFNRINSVTYRFGSVGQDTQLCLWD 450 (636)
T ss_pred cccccceeeEeecccccccccccccccccccccchhcccccccCCCCCcCCCcccccccccceEEEeecccccceEEEEe
Confidence 567788888888831 123356777899999999
Q ss_pred eeCCCc
Q psy14130 340 LTNERP 345 (494)
Q Consensus 340 ~~~~~~ 345 (494)
+.....
T Consensus 451 lteD~L 456 (636)
T KOG2394|consen 451 LTEDVL 456 (636)
T ss_pred cchhhc
Confidence 987654
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.1e-10 Score=115.05 Aligned_cols=202 Identities=12% Similarity=0.134 Sum_probs=131.3
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEe---CCCeEEEEECCCCeEEEEecCCCCceEEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAG---FDYLIILWDVGKGEALTVIDCHPDVINCLS 226 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s---~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~ 226 (494)
.|.+||..... . +.+..+...+.+.+|+|+| +.|+..+ .+..|.+||+.+++... +....+.+..+.
T Consensus 180 ~l~~~d~dg~~-------~-~~lt~~~~~~~~p~wSPDG-~~la~~s~~~g~~~i~i~dl~~G~~~~-l~~~~~~~~~~~ 249 (429)
T PRK03629 180 ELRVSDYDGYN-------Q-FVVHRSPQPLMSPAWSPDG-SKLAYVTFESGRSALVIQTLANGAVRQ-VASFPRHNGAPA 249 (429)
T ss_pred eEEEEcCCCCC-------C-EEeecCCCceeeeEEcCCC-CEEEEEEecCCCcEEEEEECCCCCeEE-ccCCCCCcCCeE
Confidence 58888877542 2 3344567789999999999 4665543 24579999998876433 222334455789
Q ss_pred EcCCCCEEEEE-eCCC--eEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCce--EEEEeCCCCCCc
Q psy14130 227 FNRDGSRLVTT-CKDK--TVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQ--VGLWDENDLNTP 301 (494)
Q Consensus 227 ~~~~~~~l~s~-~~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~--i~iwd~~~~~~~ 301 (494)
|+|||+.|+.. +.++ .|.+||+.+++..+. ..+... .....|+|++..++.+. ..++. |.++|+.+...
T Consensus 250 ~SPDG~~La~~~~~~g~~~I~~~d~~tg~~~~l-t~~~~~-~~~~~wSPDG~~I~f~s---~~~g~~~Iy~~d~~~g~~- 323 (429)
T PRK03629 250 FSPDGSKLAFALSKTGSLNLYVMDLASGQIRQV-TDGRSN-NTEPTWFPDSQNLAYTS---DQAGRPQVYKVNINGGAP- 323 (429)
T ss_pred ECCCCCEEEEEEcCCCCcEEEEEECCCCCEEEc-cCCCCC-cCceEECCCCCEEEEEe---CCCCCceEEEEECCCCCe-
Confidence 99999988865 4444 589999998875443 333333 67889999987787776 34444 44556655322
Q ss_pred eeEeeecCCCceEEeEEeCCCCEEEEEEeCC--CcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec
Q psy14130 302 LALETVDSSSGVLFPYYDHDTRILFLAGKGD--GNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ 374 (494)
Q Consensus 302 ~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~d--g~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~ 374 (494)
..+. ........+.|+|||+.|+.++..+ ..|.+||+.+++. ..+.. ........|+|||..++..
T Consensus 324 ~~lt--~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~--~~Lt~---~~~~~~p~~SpDG~~i~~~ 391 (429)
T PRK03629 324 QRIT--WEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV--QVLTD---TFLDETPSIAPNGTMVIYS 391 (429)
T ss_pred EEee--cCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCCCCe--EEeCC---CCCCCCceECCCCCEEEEE
Confidence 2221 1223455788999999996655444 3588899988763 22222 1223467899999877663
|
|
| >KOG2111|consensus | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.6e-10 Score=101.48 Aligned_cols=179 Identities=15% Similarity=0.199 Sum_probs=129.2
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECC-CCeEEEEecC--CCCceEE
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVG-KGEALTVIDC--HPDVINC 224 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~-~~~~~~~~~~--h~~~v~~ 224 (494)
.++|.|||-... .++.++. ...+|.++.+.++ .++..- .+.|.||... ..+.+..+.- ....+.+
T Consensus 74 pNkviIWDD~k~-------~~i~el~-f~~~I~~V~l~r~---riVvvl-~~~I~VytF~~n~k~l~~~et~~NPkGlC~ 141 (346)
T KOG2111|consen 74 PNKVIIWDDLKE-------RCIIELS-FNSEIKAVKLRRD---RIVVVL-ENKIYVYTFPDNPKLLHVIETRSNPKGLCS 141 (346)
T ss_pred CceEEEEecccC-------cEEEEEE-eccceeeEEEcCC---eEEEEe-cCeEEEEEcCCChhheeeeecccCCCceEe
Confidence 357999994433 4555555 6788999999987 243333 5789999987 4455555542 2233444
Q ss_pred EEEcCCCCEEEE-EeCCCeEEEEeCCCCce--EEEeeecCCCCceEEEEECCCCeEEEEEecCCCCce-EEEEeCCCCCC
Q psy14130 225 LSFNRDGSRLVT-TCKDKTVRVLDPRTGLV--ISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQ-VGLWDENDLNT 300 (494)
Q Consensus 225 l~~~~~~~~l~s-~~~d~~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~-i~iwd~~~~~~ 300 (494)
++=+.+..+||. |-+-|.|+|-|+...+. ...+.+|.+. +.+++.+-+ +.++|++ +..|+ |||||.+++..
T Consensus 142 ~~~~~~k~~LafPg~k~GqvQi~dL~~~~~~~p~~I~AH~s~-Iacv~Ln~~-Gt~vATa---StkGTLIRIFdt~~g~~ 216 (346)
T KOG2111|consen 142 LCPTSNKSLLAFPGFKTGQVQIVDLASTKPNAPSIINAHDSD-IACVALNLQ-GTLVATA---STKGTLIRIFDTEDGTL 216 (346)
T ss_pred ecCCCCceEEEcCCCccceEEEEEhhhcCcCCceEEEcccCc-eeEEEEcCC-ccEEEEe---ccCcEEEEEEEcCCCcE
Confidence 433334444544 44579999999987765 4778899988 888888877 6777777 66665 89999998776
Q ss_pred ceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCC
Q psy14130 301 PLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNER 344 (494)
Q Consensus 301 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~ 344 (494)
...+..-.....+.+++|||+..+| ++.|..|++++|.++...
T Consensus 217 l~E~RRG~d~A~iy~iaFSp~~s~L-avsSdKgTlHiF~l~~~~ 259 (346)
T KOG2111|consen 217 LQELRRGVDRADIYCIAFSPNSSWL-AVSSDKGTLHIFSLRDTE 259 (346)
T ss_pred eeeeecCCchheEEEEEeCCCccEE-EEEcCCCeEEEEEeecCC
Confidence 6655554455789999999999999 888899999999998744
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.7e-10 Score=108.92 Aligned_cols=185 Identities=15% Similarity=0.119 Sum_probs=132.4
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
++|.+.|..+. +.+..+......-..+.|+|+| ++++.++.||.|.++|+.+++.+.+++. .....+++++
T Consensus 16 ~~v~viD~~t~-------~~~~~i~~~~~~h~~~~~s~Dg-r~~yv~~rdg~vsviD~~~~~~v~~i~~-G~~~~~i~~s 86 (369)
T PF02239_consen 16 GSVAVIDGATN-------KVVARIPTGGAPHAGLKFSPDG-RYLYVANRDGTVSVIDLATGKVVATIKV-GGNPRGIAVS 86 (369)
T ss_dssp TEEEEEETTT--------SEEEEEE-STTEEEEEE-TT-S-SEEEEEETTSEEEEEETTSSSEEEEEE--SSEEEEEEE-
T ss_pred CEEEEEECCCC-------eEEEEEcCCCCceeEEEecCCC-CEEEEEcCCCeEEEEECCcccEEEEEec-CCCcceEEEc
Confidence 36999998887 5566666444444567899998 6888889999999999999999999884 4557889999
Q ss_pred CCCCEEEEEe-CCCeEEEEeCCCCceEEEeeecC------CCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCc
Q psy14130 229 RDGSRLVTTC-KDKTVRVLDPRTGLVISQGVCHP------GTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTP 301 (494)
Q Consensus 229 ~~~~~l~s~~-~d~~v~iwd~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~ 301 (494)
+||++++++. .++.+.++|.++.++++.+.... ..++..+..++....++++- .+.++|.+.|..+.. +
T Consensus 87 ~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~l---kd~~~I~vVdy~d~~-~ 162 (369)
T PF02239_consen 87 PDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNL---KDTGEIWVVDYSDPK-N 162 (369)
T ss_dssp -TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEE---TTTTEEEEEETTTSS-C
T ss_pred CCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEE---ccCCeEEEEEecccc-c
Confidence 9999998776 68999999999999888876432 23466777778766676666 456889898988763 3
Q ss_pred eeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCce
Q psy14130 302 LALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPY 346 (494)
Q Consensus 302 ~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~ 346 (494)
.....+..........|+|++++++++...+..|-++|..+++..
T Consensus 163 ~~~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v 207 (369)
T PF02239_consen 163 LKVTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLV 207 (369)
T ss_dssp EEEEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEE
T ss_pred cceeeecccccccccccCcccceeeecccccceeEEEeeccceEE
Confidence 444455555667789999999999887788889999999887653
|
... |
| >KOG2111|consensus | Back alignment and domain information |
|---|
Probab=99.40 E-value=3.1e-10 Score=99.66 Aligned_cols=179 Identities=13% Similarity=0.176 Sum_probs=131.0
Q ss_pred CeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCC-CCceEEEeeecCCCCceEEEEECC-CCe
Q psy14130 199 YLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPR-TGLVISQGVCHPGTRSSKAVFIGD-TGR 276 (494)
Q Consensus 199 ~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 276 (494)
..|.|||=....++.++. ...+|.++.+.++ .|+..- .++|.+|... +.+.++.+.....++-. ++..|. +..
T Consensus 75 NkviIWDD~k~~~i~el~-f~~~I~~V~l~r~--riVvvl-~~~I~VytF~~n~k~l~~~et~~NPkGl-C~~~~~~~k~ 149 (346)
T KOG2111|consen 75 NKVIIWDDLKERCIIELS-FNSEIKAVKLRRD--RIVVVL-ENKIYVYTFPDNPKLLHVIETRSNPKGL-CSLCPTSNKS 149 (346)
T ss_pred ceEEEEecccCcEEEEEE-eccceeeEEEcCC--eEEEEe-cCeEEEEEcCCChhheeeeecccCCCce-EeecCCCCce
Confidence 479999966677787777 6789999999865 455543 5689999987 55666666655543222 223333 233
Q ss_pred EEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCc-EEEEEeeCCCceEEecccccC
Q psy14130 277 IVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGN-IRYYELTNERPYIHFLNQSLS 355 (494)
Q Consensus 277 l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~-i~~wd~~~~~~~~~~~~~~~~ 355 (494)
+++ |.+-.-|+|+|-|+.............|.+.|.+++.+-+|..+ ||+|..|+ |||||..+|..+.++..+..
T Consensus 150 ~La--fPg~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~v-ATaStkGTLIRIFdt~~g~~l~E~RRG~d- 225 (346)
T KOG2111|consen 150 LLA--FPGFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLV-ATASTKGTLIRIFDTEDGTLLQELRRGVD- 225 (346)
T ss_pred EEE--cCCCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEE-EEeccCcEEEEEEEcCCCcEeeeeecCCc-
Confidence 444 23357799999999865442122233577899999999999999 99999998 89999999998777655543
Q ss_pred CCCeeEEEEecCCceeeec--cceeEEEEeeCC
Q psy14130 356 GAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHTT 386 (494)
Q Consensus 356 ~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~~ 386 (494)
...+.+++|+|+..+++.+ -+++.+|.+...
T Consensus 226 ~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~~ 258 (346)
T KOG2111|consen 226 RADIYCIAFSPNSSWLAVSSDKGTLHIFSLRDT 258 (346)
T ss_pred hheEEEEEeCCCccEEEEEcCCCeEEEEEeecC
Confidence 4579999999999988764 789999999873
|
|
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=99.39 E-value=6.3e-11 Score=102.84 Aligned_cols=116 Identities=18% Similarity=0.265 Sum_probs=88.1
Q ss_pred ccccEEEEEEcCCCCCEEE-EEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeC---CCeEEEEeCCC
Q psy14130 175 HKRRVGYIEWHPTAENVVA-SAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCK---DKTVRVLDPRT 250 (494)
Q Consensus 175 h~~~V~~~~~~p~~~~~l~-s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~---d~~v~iwd~~~ 250 (494)
..++|.+++|+|+|..+++ +|..+..|.+||++ ++.+..+. ...+..+.|+|+|++|++++. .|.|.+||.++
T Consensus 58 ~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~-~~~i~~~~--~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~ 134 (194)
T PF08662_consen 58 KEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK-GKKIFSFG--TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRK 134 (194)
T ss_pred CCCceEEEEECcCCCEEEEEEccCCcccEEEcCc-ccEeEeec--CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCC
Confidence 3456999999999954433 34467899999996 66666664 467789999999999999875 36799999998
Q ss_pred CceEEEeeecCCCCceEEEEECCCCeEEEEEec--CCCCceEEEEeCC
Q psy14130 251 GLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFS--RHSDRQVGLWDEN 296 (494)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~--~~~d~~i~iwd~~ 296 (494)
.+.+.+... .. +..+.|+|++..++++... ...|..++||+..
T Consensus 135 ~~~i~~~~~-~~--~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~ 179 (194)
T PF08662_consen 135 KKKISTFEH-SD--ATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQ 179 (194)
T ss_pred CEEeecccc-Cc--EEEEEEcCCCCEEEEEEeccceeccccEEEEEec
Confidence 888777643 22 6899999997777766510 1237889999975
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.3e-10 Score=112.73 Aligned_cols=197 Identities=10% Similarity=0.068 Sum_probs=122.4
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCC--eEEEEECCCCeEEEEecCCCCceEEEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDY--LIILWDVGKGEALTVIDCHPDVINCLSF 227 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~--~v~iwd~~~~~~~~~~~~h~~~v~~l~~ 227 (494)
.|.+|++.++.. +.+..+.+ .+...+|+|+|..++++.+.++ .|.+||+.+++... +..+...+....|
T Consensus 224 ~i~i~dl~~G~~-----~~l~~~~~---~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~~~~-lt~~~~~~~~~~w 294 (429)
T PRK03629 224 ALVIQTLANGAV-----RQVASFPR---HNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQ-VTDGRSNNTEPTW 294 (429)
T ss_pred EEEEEECCCCCe-----EEccCCCC---CcCCeEECCCCCEEEEEEcCCCCcEEEEEECCCCCEEE-ccCCCCCcCceEE
Confidence 589999887632 22222333 3456899999954444545555 58999998876544 4445567789999
Q ss_pred cCCCCEEEEEeCC-C--eEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeE
Q psy14130 228 NRDGSRLVTTCKD-K--TVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLAL 304 (494)
Q Consensus 228 ~~~~~~l~s~~~d-~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~ 304 (494)
+|||+.|+.++.+ + .|.++|+.+++. ..+..+... .....|+|++..++.++. ......|.+||+.+... ..+
T Consensus 295 SPDG~~I~f~s~~~g~~~Iy~~d~~~g~~-~~lt~~~~~-~~~~~~SpDG~~Ia~~~~-~~g~~~I~~~dl~~g~~-~~L 370 (429)
T PRK03629 295 FPDSQNLAYTSDQAGRPQVYKVNINGGAP-QRITWEGSQ-NQDADVSSDGKFMVMVSS-NGGQQHIAKQDLATGGV-QVL 370 (429)
T ss_pred CCCCCEEEEEeCCCCCceEEEEECCCCCe-EEeecCCCC-ccCEEECCCCCEEEEEEc-cCCCceEEEEECCCCCe-EEe
Confidence 9999988877754 4 455557776653 333333332 456789999777777661 11234688899876542 222
Q ss_pred eeecCCCceEEeEEeCCCCEEEEEEeCCCc---EEEEEeeCCCceEEecccccCCCCeeEEEEecC
Q psy14130 305 ETVDSSSGVLFPYYDHDTRILFLAGKGDGN---IRYYELTNERPYIHFLNQSLSGAPQRGLGFMPK 367 (494)
Q Consensus 305 ~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~---i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 367 (494)
. .......+.|+|||+.|+. ++.++. +.++++.... ... +.. +...+...+|+|-
T Consensus 371 t---~~~~~~~p~~SpDG~~i~~-~s~~~~~~~l~~~~~~G~~-~~~-l~~--~~~~~~~p~Wsp~ 428 (429)
T PRK03629 371 T---DTFLDETPSIAPNGTMVIY-SSSQGMGSVLNLVSTDGRF-KAR-LPA--TDGQVKFPAWSPY 428 (429)
T ss_pred C---CCCCCCCceECCCCCEEEE-EEcCCCceEEEEEECCCCC-eEE-Ccc--CCCCcCCcccCCC
Confidence 1 1223446889999999944 445544 5666664333 222 332 2456778888873
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=5.3e-10 Score=110.61 Aligned_cols=197 Identities=12% Similarity=0.107 Sum_probs=124.2
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCC--eEEEEECCCCeEEEEecCCCCceEEEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDY--LIILWDVGKGEALTVIDCHPDVINCLSF 227 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~--~v~iwd~~~~~~~~~~~~h~~~v~~l~~ 227 (494)
.|.+||+.++.. ..+..+.+...+.+|+|+|..++++.+.++ .|.+||+.+++. ..+..+.......+|
T Consensus 229 ~l~~~dl~~g~~--------~~l~~~~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~-~~lt~~~~~~~~~~~ 299 (433)
T PRK04922 229 AIYVQDLATGQR--------ELVASFRGINGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQL-TRLTNHFGIDTEPTW 299 (433)
T ss_pred EEEEEECCCCCE--------EEeccCCCCccCceECCCCCEEEEEEeCCCCceEEEEECCCCCe-EECccCCCCccceEE
Confidence 589999987632 122233444567899999965556666666 599999988764 445556666678999
Q ss_pred cCCCCEEEEEeC-CCe--EEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeE
Q psy14130 228 NRDGSRLVTTCK-DKT--VRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLAL 304 (494)
Q Consensus 228 ~~~~~~l~s~~~-d~~--v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~ 304 (494)
+|||+.|+.++. ++. |.++|+.+++.. .+..+... .....|+|++..++.+.. ......|.+||+.+... ..
T Consensus 300 spDG~~l~f~sd~~g~~~iy~~dl~~g~~~-~lt~~g~~-~~~~~~SpDG~~Ia~~~~-~~~~~~I~v~d~~~g~~-~~- 374 (433)
T PRK04922 300 APDGKSIYFTSDRGGRPQIYRVAASGGSAE-RLTFQGNY-NARASVSPDGKKIAMVHG-SGGQYRIAVMDLSTGSV-RT- 374 (433)
T ss_pred CCCCCEEEEEECCCCCceEEEEECCCCCeE-EeecCCCC-ccCEEECCCCCEEEEEEC-CCCceeEEEEECCCCCe-EE-
Confidence 999998887764 444 667777776633 33223222 456889999777776651 11223699999876543 22
Q ss_pred eeecCCCceEEeEEeCCCCEEEEEEeCC--CcEEEEEeeCCCceEEecccccCCCCeeEEEEec
Q psy14130 305 ETVDSSSGVLFPYYDHDTRILFLAGKGD--GNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMP 366 (494)
Q Consensus 305 ~~~~~~~~v~~~~~~~~~~~l~~~g~~d--g~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p 366 (494)
+........+.|+|||++++.+.... +.|.++++..+. ...+.. ....+...+|+|
T Consensus 375 --Lt~~~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~g~~--~~~l~~--~~g~~~~p~wsp 432 (433)
T PRK04922 375 --LTPGSLDESPSFAPNGSMVLYATREGGRGVLAAVSTDGRV--RQRLVS--ADGEVREPAWSP 432 (433)
T ss_pred --CCCCCCCCCceECCCCCEEEEEEecCCceEEEEEECCCCc--eEEccc--CCCCCCCCccCC
Confidence 12222345679999999986665443 346677775432 222222 134466677776
|
|
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.5e-09 Score=107.45 Aligned_cols=200 Identities=17% Similarity=0.234 Sum_probs=130.9
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCC---CeEEEEECCCCeEEEEecCCCCceEEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFD---YLIILWDVGKGEALTVIDCHPDVINCLS 226 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d---~~v~iwd~~~~~~~~~~~~h~~~v~~l~ 226 (494)
.|.++|.... ....+..+...+.+.+|+|+| +.|+.++.+ ..|++||+.+++... +..+.+.+.+++
T Consensus 171 ~l~~~d~~g~--------~~~~l~~~~~~~~~p~~Spdg-~~la~~~~~~~~~~i~v~d~~~g~~~~-~~~~~~~~~~~~ 240 (417)
T TIGR02800 171 ELQVADYDGA--------NPQTITRSREPILSPAWSPDG-QKLAYVSFESGKPEIYVQDLATGQREK-VASFPGMNGAPA 240 (417)
T ss_pred eEEEEcCCCC--------CCEEeecCCCceecccCCCCC-CEEEEEEcCCCCcEEEEEECCCCCEEE-eecCCCCccceE
Confidence 4777776533 224455567778999999999 566666543 479999998876443 334556677899
Q ss_pred EcCCCCEEEE-EeCCC--eEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCC--ceEEEEeCCCCCCc
Q psy14130 227 FNRDGSRLVT-TCKDK--TVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSD--RQVGLWDENDLNTP 301 (494)
Q Consensus 227 ~~~~~~~l~s-~~~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d--~~i~iwd~~~~~~~ 301 (494)
|+|||+.|+. .+.++ .|.+||+.++.. ..+..+... .....|++++..++.++ ..+ ..|.++|+.+...
T Consensus 241 ~spDg~~l~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~-~~~~~~s~dg~~l~~~s---~~~g~~~iy~~d~~~~~~- 314 (417)
T TIGR02800 241 FSPDGSKLAVSLSKDGNPDIYVMDLDGKQL-TRLTNGPGI-DTEPSWSPDGKSIAFTS---DRGGSPQIYMMDADGGEV- 314 (417)
T ss_pred ECCCCCEEEEEECCCCCccEEEEECCCCCE-EECCCCCCC-CCCEEECCCCCEEEEEE---CCCCCceEEEEECCCCCE-
Confidence 9999997764 44444 588999987764 334444333 45678999877777766 333 3688888775432
Q ss_pred eeEeeecCCCceEEeEEeCCCCEEEEEEeCCC---cEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeee
Q psy14130 302 LALETVDSSSGVLFPYYDHDTRILFLAGKGDG---NIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVT 373 (494)
Q Consensus 302 ~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg---~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~ 373 (494)
..+. ........+.|+|+++.++.+. .++ .|.+||+.++.. ..+.. .......+|+|++..++.
T Consensus 315 ~~l~--~~~~~~~~~~~spdg~~i~~~~-~~~~~~~i~~~d~~~~~~--~~l~~---~~~~~~p~~spdg~~l~~ 381 (417)
T TIGR02800 315 RRLT--FRGGYNASPSWSPDGDLIAFVH-REGGGFNIAVMDLDGGGE--RVLTD---TGLDESPSFAPNGRMILY 381 (417)
T ss_pred EEee--cCCCCccCeEECCCCCEEEEEE-ccCCceEEEEEeCCCCCe--EEccC---CCCCCCceECCCCCEEEE
Confidence 1111 1334566789999999995554 443 688888877543 22222 122355689999987665
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >KOG1409|consensus | Back alignment and domain information |
|---|
Probab=99.32 E-value=4.4e-10 Score=99.68 Aligned_cols=168 Identities=21% Similarity=0.353 Sum_probs=117.9
Q ss_pred cceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe-EEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEE
Q psy14130 167 EWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE-ALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRV 245 (494)
Q Consensus 167 ~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~-~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~i 245 (494)
.++.++.+|...+.+++|.|.. .+|++|..|..+.+||+--.+ ....+.+|.+.|..+...+--+.+.+++.||.|.+
T Consensus 188 ~~i~~~~~h~~~~~~l~Wd~~~-~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~ 266 (404)
T KOG1409|consen 188 QLITTFNGHTGEVTCLKWDPGQ-RLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGGIVV 266 (404)
T ss_pred ceEEEEcCcccceEEEEEcCCC-cEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhheeeeeccCCCeEEE
Confidence 5677899999999999999986 799999999999999996543 45567899999999999988899999999999999
Q ss_pred EeCCCCceEE-Ee----------------------------eec----CCCCceEEEEECCCCeEEEEEecCCCCceEEE
Q psy14130 246 LDPRTGLVIS-QG----------------------------VCH----PGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGL 292 (494)
Q Consensus 246 wd~~~~~~~~-~~----------------------------~~~----~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~i 292 (494)
||+....... .+ ..| -+. ..+...+.....+...| ..-.+|+
T Consensus 267 w~mn~~r~etpewl~s~~cQ~c~qpffwn~~~m~~~k~~glr~h~crkcg~-avc~~c~s~~~~~p~mg----~e~~vR~ 341 (404)
T KOG1409|consen 267 WNMNVKRVETPEWLDSDSCQKCNQPFFWNFRQMWDRKQLGLRQHHCRKCGK-AVCGKCSSNRSSYPTMG----FEFSVRV 341 (404)
T ss_pred EeccceeecCccccccchhhhhCchHHHHHHHHHhhhhhhhhhhhhhhhhh-hcCcccccCcccccccc----ceeEEEE
Confidence 9986433110 00 000 011 12222233334455555 2445666
Q ss_pred EeCC-----CCC-CceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeC
Q psy14130 293 WDEN-----DLN-TPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTN 342 (494)
Q Consensus 293 wd~~-----~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~ 342 (494)
-|.- ... .++.. ..+...+|..+.+...-..| +|++.|..|+|||++.
T Consensus 342 ~~~c~~~i~~~~~t~LA~-phei~tgItamhlqetlglL-vTsG~~Rvi~iwd~~~ 395 (404)
T KOG1409|consen 342 CDSCYPTIKDEERTPLAI-PHEIKTGITAMHLQETLGLL-VTSGTDRVIKIWDVRS 395 (404)
T ss_pred ecccchhhhcCCCCcccc-ccccccceeEEEhhhhccce-eecCCceEEEEEechh
Confidence 5531 111 12222 22345678888888887777 8999999999999875
|
|
| >KOG0974|consensus | Back alignment and domain information |
|---|
Probab=99.31 E-value=5.8e-11 Score=119.38 Aligned_cols=179 Identities=17% Similarity=0.250 Sum_probs=132.9
Q ss_pred EEcCcEEEEEcCCCCCCCCcccceEeccccccc-----EEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCC
Q psy14130 146 LPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRR-----VGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPD 220 (494)
Q Consensus 146 ~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~-----V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~ 220 (494)
...+.+-|||...+.... ... +... ..-+.++++. -++++|+.-+.|.+|+....+.-..+.+|++
T Consensus 106 ~~~ns~~i~d~~~~~~~~-------~i~-~~er~~l~~~~~~g~s~~~-~~i~~gsv~~~iivW~~~~dn~p~~l~GHeG 176 (967)
T KOG0974|consen 106 TSRNSLLIRDSKNSSVLS-------KIQ-SDERCTLYSSLIIGDSAEE-LYIASGSVFGEIIVWKPHEDNKPIRLKGHEG 176 (967)
T ss_pred EcCceEEEEecccCceeh-------hcC-CCceEEEEeEEEEeccCcE-EEEEeccccccEEEEeccccCCcceecccCC
Confidence 334578899987763322 122 2222 1223346664 6899999999999999974443346889999
Q ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEE-EeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCC
Q psy14130 221 VINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVIS-QGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLN 299 (494)
Q Consensus 221 ~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~ 299 (494)
.|.++.|+.||+++++.|.|+++|+|++.+.+... ..-+|... +..+++.+. +++++| .|.+.++|+.....
T Consensus 177 ~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaR-vw~~~~~~n--~i~t~g----edctcrvW~~~~~~ 249 (967)
T KOG0974|consen 177 SIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSAR-VWACCFLPN--RIITVG----EDCTCRVWGVNGTQ 249 (967)
T ss_pred ceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccce-eEEEEeccc--eeEEec----cceEEEEEecccce
Confidence 99999999999999999999999999999998665 66788877 899999987 677777 99999999765322
Q ss_pred CceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCC
Q psy14130 300 TPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNE 343 (494)
Q Consensus 300 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~ 343 (494)
. ..+. ......+..++..++...+ +|++.||.+++||+...
T Consensus 250 l-~~y~-~h~g~~iw~~~~~~~~~~~-vT~g~Ds~lk~~~l~~r 290 (967)
T KOG0974|consen 250 L-EVYD-EHSGKGIWKIAVPIGVIIK-VTGGNDSTLKLWDLNGR 290 (967)
T ss_pred e-hhhh-hhhhcceeEEEEcCCceEE-EeeccCcchhhhhhhcc
Confidence 1 1111 1122568888887776666 99999999999998653
|
|
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.4e-09 Score=107.94 Aligned_cols=213 Identities=14% Similarity=0.165 Sum_probs=135.8
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCC---CeEEEEECCCCeEEEEecCCCCceEEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFD---YLIILWDVGKGEALTVIDCHPDVINCLS 226 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d---~~v~iwd~~~~~~~~~~~~h~~~v~~l~ 226 (494)
.|.++|.... . .+.+..+...+...+|+|+| +.|+..+.+ ..|.+||+.+++... +....+.+....
T Consensus 180 ~l~~~d~~g~-------~-~~~l~~~~~~~~~p~wSpDG-~~la~~s~~~~~~~l~~~~l~~g~~~~-l~~~~g~~~~~~ 249 (430)
T PRK00178 180 TLQRSDYDGA-------R-AVTLLQSREPILSPRWSPDG-KRIAYVSFEQKRPRIFVQNLDTGRREQ-ITNFEGLNGAPA 249 (430)
T ss_pred EEEEECCCCC-------C-ceEEecCCCceeeeeECCCC-CEEEEEEcCCCCCEEEEEECCCCCEEE-ccCCCCCcCCeE
Confidence 3667776644 2 23444577789999999999 566555433 369999998876533 333445566789
Q ss_pred EcCCCCEEEE-EeCCC--eEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCC--ceEEEEeCCCCCCc
Q psy14130 227 FNRDGSRLVT-TCKDK--TVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSD--RQVGLWDENDLNTP 301 (494)
Q Consensus 227 ~~~~~~~l~s-~~~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d--~~i~iwd~~~~~~~ 301 (494)
|+|||+.|+. .+.++ .|.+||+.+++.. .+..+... .....|+|++..++.++ ..+ ..|.++|+.+...
T Consensus 250 ~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~~-~lt~~~~~-~~~~~~spDg~~i~f~s---~~~g~~~iy~~d~~~g~~- 323 (430)
T PRK00178 250 WSPDGSKLAFVLSKDGNPEIYVMDLASRQLS-RVTNHPAI-DTEPFWGKDGRTLYFTS---DRGGKPQIYKVNVNGGRA- 323 (430)
T ss_pred ECCCCCEEEEEEccCCCceEEEEECCCCCeE-EcccCCCC-cCCeEECCCCCEEEEEE---CCCCCceEEEEECCCCCE-
Confidence 9999998874 44454 6888899987743 34444433 56678999988887776 333 4677778766442
Q ss_pred eeEeeecCCCceEEeEEeCCCCEEEEEEeCCC--cEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec---cc
Q psy14130 302 LALETVDSSSGVLFPYYDHDTRILFLAGKGDG--NIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ---CE 376 (494)
Q Consensus 302 ~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg--~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~---~~ 376 (494)
..+. . .......+.|+|||+.|+.+...++ .|.+||+.+++. +.+... .......|+|+|..++.. ++
T Consensus 324 ~~lt-~-~~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~--~~lt~~---~~~~~p~~spdg~~i~~~~~~~g 396 (430)
T PRK00178 324 ERVT-F-VGNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSV--RILTDT---SLDESPSVAPNGTMLIYATRQQG 396 (430)
T ss_pred EEee-c-CCCCccceEECCCCCEEEEEEccCCceEEEEEECCCCCE--EEccCC---CCCCCceECCCCCEEEEEEecCC
Confidence 2221 1 1123345789999999966654444 478889888764 333221 122356899999877653 33
Q ss_pred eeEEEEeeC
Q psy14130 377 IFRFFKLHT 385 (494)
Q Consensus 377 ~~~~~~l~~ 385 (494)
..++|.+..
T Consensus 397 ~~~l~~~~~ 405 (430)
T PRK00178 397 RGVLMLVSI 405 (430)
T ss_pred ceEEEEEEC
Confidence 344554444
|
|
| >KOG2315|consensus | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.5e-08 Score=95.77 Aligned_cols=199 Identities=13% Similarity=0.189 Sum_probs=131.8
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeC--C---------CeEEEEECCCCeEEEEecCC
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGF--D---------YLIILWDVGKGEALTVIDCH 218 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~--d---------~~v~iwd~~~~~~~~~~~~h 218 (494)
.|+||.+........+ ..+++ ....=..+.|++-|..+|+.++. | .++.+.+++.......+. .
T Consensus 195 ~vri~~~~~~~~~~~~--a~ksF--Fkadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L~-k 269 (566)
T KOG2315|consen 195 SVRIYKYPEEGQHQPV--ANKSF--FKADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPLL-K 269 (566)
T ss_pred EEEEeccccccccchh--hhccc--cccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEecC-C
Confidence 4899998854322111 01111 11222468899887656555543 3 378888887444444454 5
Q ss_pred CCceEEEEEcCCCCEEEEEe--CCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCC
Q psy14130 219 PDVINCLSFNRDGSRLVTTC--KDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEN 296 (494)
Q Consensus 219 ~~~v~~l~~~~~~~~l~s~~--~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~ 296 (494)
.++|.++.|+|+|+.++.+- .-.++.|||++ +.++..+. .+. -+++.|+|.+..++.+||+. -.|.+-|||+.
T Consensus 270 ~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr-~~~v~df~--egp-RN~~~fnp~g~ii~lAGFGN-L~G~mEvwDv~ 344 (566)
T KOG2315|consen 270 EGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLR-GKPVFDFP--EGP-RNTAFFNPHGNIILLAGFGN-LPGDMEVWDVP 344 (566)
T ss_pred CCCceEEEECCCCCEEEEEEecccceEEEEcCC-CCEeEeCC--CCC-ccceEECCCCCEEEEeecCC-CCCceEEEecc
Confidence 79999999999998776643 56789999998 66666553 344 57889999999999999865 67999999998
Q ss_pred CCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeC-----CCcEEEEEeeCCCceEEecccccCCCCeeEEEEecC
Q psy14130 297 DLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKG-----DGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPK 367 (494)
Q Consensus 297 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~-----dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 367 (494)
+.+..... .. ...+-+.|+|||++++.+... |+.++||+........+ .+. .....+.|-|-
T Consensus 345 n~K~i~~~---~a-~~tt~~eW~PdGe~flTATTaPRlrvdNg~KiwhytG~~l~~~---~f~--sEL~qv~W~P~ 411 (566)
T KOG2315|consen 345 NRKLIAKF---KA-ANTTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYTGSLLHEK---MFK--SELLQVEWRPF 411 (566)
T ss_pred chhhcccc---cc-CCceEEEEcCCCcEEEEEeccccEEecCCeEEEEecCceeehh---hhh--HhHhheeeeec
Confidence 84443222 22 334557999999999554443 88999999976432211 121 14677888764
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=7.8e-10 Score=109.04 Aligned_cols=196 Identities=13% Similarity=0.109 Sum_probs=120.0
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEE--CCCCeEEEEecCCCCceEEEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWD--VGKGEALTVIDCHPDVINCLSF 227 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd--~~~~~~~~~~~~h~~~v~~l~~ 227 (494)
.|.+||+.++.. ..+....+.+.+.+|+|+|..++++.+.++...||. +..+. ...+..+.....+..|
T Consensus 221 ~I~~~dl~~g~~--------~~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~w 291 (427)
T PRK02889 221 VVYVHDLATGRR--------RVVANFKGSNSAPAWSPDGRTLAVALSRDGNSQIYTVNADGSG-LRRLTQSSGIDTEPFF 291 (427)
T ss_pred EEEEEECCCCCE--------EEeecCCCCccceEECCCCCEEEEEEccCCCceEEEEECCCCC-cEECCCCCCCCcCeEE
Confidence 599999987732 122223345668999999954555777788766665 44443 4556656666778899
Q ss_pred cCCCCEEEEEeC-CCeEEEEeC--CCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCC--ceEEEEeCCCCCCce
Q psy14130 228 NRDGSRLVTTCK-DKTVRVLDP--RTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSD--RQVGLWDENDLNTPL 302 (494)
Q Consensus 228 ~~~~~~l~s~~~-d~~v~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d--~~i~iwd~~~~~~~~ 302 (494)
+|||+.|+..+. ++...+|.+ .+++. ..+..+... .....|+|++..++.++ ..+ ..|.+||+.+....
T Consensus 292 SpDG~~l~f~s~~~g~~~Iy~~~~~~g~~-~~lt~~g~~-~~~~~~SpDG~~Ia~~s---~~~g~~~I~v~d~~~g~~~- 365 (427)
T PRK02889 292 SPDGRSIYFTSDRGGAPQIYRMPASGGAA-QRVTFTGSY-NTSPRISPDGKLLAYIS---RVGGAFKLYVQDLATGQVT- 365 (427)
T ss_pred cCCCCEEEEEecCCCCcEEEEEECCCCce-EEEecCCCC-cCceEECCCCCEEEEEE---ccCCcEEEEEEECCCCCeE-
Confidence 999998886664 456666654 44442 222222222 44678999977777665 222 37999998765422
Q ss_pred eEeeecCCCceEEeEEeCCCCEEEEEEeCCCc--EEEEEeeCCCceEEecccccCCCCeeEEEEecC
Q psy14130 303 ALETVDSSSGVLFPYYDHDTRILFLAGKGDGN--IRYYELTNERPYIHFLNQSLSGAPQRGLGFMPK 367 (494)
Q Consensus 303 ~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~--i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 367 (494)
.+. .......+.|+|||+.|+.+....|. +.+.++ +++. ...+.. ..+.+...+|+|-
T Consensus 366 ~lt---~~~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~-~g~~-~~~l~~--~~g~~~~p~wsp~ 425 (427)
T PRK02889 366 ALT---DTTRDESPSFAPNGRYILYATQQGGRSVLAAVSS-DGRI-KQRLSV--QGGDVREPSWGPF 425 (427)
T ss_pred Ecc---CCCCccCceECCCCCEEEEEEecCCCEEEEEEEC-CCCc-eEEeec--CCCCCCCCccCCC
Confidence 211 22234678999999999777655555 444444 2332 222221 2345667777774
|
|
| >KOG1334|consensus | Back alignment and domain information |
|---|
Probab=99.29 E-value=2.7e-11 Score=111.86 Aligned_cols=212 Identities=18% Similarity=0.151 Sum_probs=157.2
Q ss_pred eEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEe-cCCCCceEEEEEcC--CCCEEEEEeCCCeEEE
Q psy14130 169 IMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVI-DCHPDVINCLSFNR--DGSRLVTTCKDKTVRV 245 (494)
Q Consensus 169 ~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~-~~h~~~v~~l~~~~--~~~~l~s~~~d~~v~i 245 (494)
...|.+|.+.|+.|.|+..| ..|+|||.|..|.+||...++.+..+ .+|...|....|-| +.+.|++++.||.+++
T Consensus 135 ~~kL~~H~GcVntV~FN~~G-d~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~ 213 (559)
T KOG1334|consen 135 QKKLNKHKGCVNTVHFNQRG-DVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRV 213 (559)
T ss_pred hhcccCCCCccceeeecccC-ceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceee
Confidence 34677899999999999999 79999999999999999988877666 47999999999988 4668999999999998
Q ss_pred EeCCCCc-e--EEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecC-C---CceEEeEE
Q psy14130 246 LDPRTGL-V--ISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDS-S---SGVLFPYY 318 (494)
Q Consensus 246 wd~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~---~~v~~~~~ 318 (494)
=.+-... + ...+..|.+. +..++.-|....-|.++ +.|+.+.-+|++.......+..... . -....++.
T Consensus 214 s~i~~t~~~e~t~rl~~h~g~-vhklav~p~sp~~f~S~---geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~ 289 (559)
T KOG1334|consen 214 SEILETGYVENTKRLAPHEGP-VHKLAVEPDSPKPFLSC---GEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAV 289 (559)
T ss_pred eeeccccceecceecccccCc-cceeeecCCCCCccccc---ccccceeeeeeccCCccceeeeeccCCccceeeeeEec
Confidence 7654333 2 3445567777 88888888766555544 4999999999987543322222111 1 25677899
Q ss_pred eCCCCEEEEEEeCCCcEEEEEeeCCCc------eEEecccc---cCCCCeeEEEEecCCceeee--ccceeEEEEeeC
Q psy14130 319 DHDTRILFLAGKGDGNIRYYELTNERP------YIHFLNQS---LSGAPQRGLGFMPKRGCDVT--QCEIFRFFKLHT 385 (494)
Q Consensus 319 ~~~~~~l~~~g~~dg~i~~wd~~~~~~------~~~~~~~~---~~~~~v~~~~~~p~~~~~~~--~~~~~~~~~l~~ 385 (494)
+|...+.+++|+.|..+++||.+.-.. +.++...+ .....|++++++.++..+.+ +|+.+.++.-..
T Consensus 290 ~P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~ 367 (559)
T KOG1334|consen 290 DPRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSM 367 (559)
T ss_pred CCCCccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEecccc
Confidence 999988889999999999999875321 12222222 23456899999977665544 588888885443
|
|
| >KOG4547|consensus | Back alignment and domain information |
|---|
Probab=99.29 E-value=3.8e-10 Score=107.12 Aligned_cols=136 Identities=17% Similarity=0.230 Sum_probs=115.8
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcC
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNR 229 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~ 229 (494)
.|.+|++..+++. ....-.+|.+.|+++.++.+. ..|.|++.|+.+..|+...++.++.+++....+.+++.+|
T Consensus 81 ~v~~ys~~~g~it-----~~~st~~h~~~v~~~~~~~~~-~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~ 154 (541)
T KOG4547|consen 81 SVLLYSVAGGEIT-----AKLSTDKHYGNVNEILDAQRL-GCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCISP 154 (541)
T ss_pred cEEEEEecCCeEE-----EEEecCCCCCcceeeeccccc-CceEecCCceeEEEEecccceeeeeeccCCCccceEEEcC
Confidence 5888888877442 222334699999999999987 6999999999999999999999999999999999999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECC-----CCeEEEEEecCCCCceEEEEeCCC
Q psy14130 230 DGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGD-----TGRIVTTGFSRHSDRQVGLWDEND 297 (494)
Q Consensus 230 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~l~~~g~~~~~d~~i~iwd~~~ 297 (494)
||..+++++ +.|++||+++++.+..+.+|.+. +..+.|... +.+++++. ..++.+.+|-++.
T Consensus 155 D~~~l~~as--~~ik~~~~~~kevv~~ftgh~s~-v~t~~f~~~~~g~~G~~vLssa---~~~r~i~~w~v~~ 221 (541)
T KOG4547|consen 155 DGKILLTAS--RQIKVLDIETKEVVITFTGHGSP-VRTLSFTTLIDGIIGKYVLSSA---AAERGITVWVVEK 221 (541)
T ss_pred CCCEEEecc--ceEEEEEccCceEEEEecCCCcc-eEEEEEEEeccccccceeeecc---ccccceeEEEEEc
Confidence 999999987 57999999999999999999998 888888776 56677776 5677788887654
|
|
| >KOG3881|consensus | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.1e-09 Score=98.74 Aligned_cols=224 Identities=12% Similarity=0.084 Sum_probs=157.5
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC----eEEEEecCCCCceEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKG----EALTVIDCHPDVINCL 225 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~----~~~~~~~~h~~~v~~l 225 (494)
.+....+.+.+..... ..+......+.+|..++... ..|++|-.+|.+.+|....+ ..+..+..+ ..+..+
T Consensus 80 ~~~~~~~~E~~~~s~~-~~~~~~~l~~~~I~gl~~~d---g~Litc~~sG~l~~~~~k~~d~hss~l~~la~g-~g~~~~ 154 (412)
T KOG3881|consen 80 DLPKFVIEEFEISSSL-DDAKTVSLGTKSIKGLKLAD---GTLITCVSSGNLQVRHDKSGDLHSSKLIKLATG-PGLYDV 154 (412)
T ss_pred ccccccccCCcccccc-ccccccccccccccchhhcC---CEEEEEecCCcEEEEeccCCccccccceeeecC-Cceeee
Confidence 4566666655443322 11223344566676666542 37888899999999998743 234444433 456666
Q ss_pred EEcCCC-CEEEEEeCC--CeEEEEeCCCCceEEEeeecCC--------CCceEEEEECC-CCeEEEEEecCCCCceEEEE
Q psy14130 226 SFNRDG-SRLVTTCKD--KTVRVLDPRTGLVISQGVCHPG--------TRSSKAVFIGD-TGRIVTTGFSRHSDRQVGLW 293 (494)
Q Consensus 226 ~~~~~~-~~l~s~~~d--~~v~iwd~~~~~~~~~~~~~~~--------~~~~~~~~~~~-~~~l~~~g~~~~~d~~i~iw 293 (494)
.-++.. ..+++|+.. ..+.|||+.+.+.+.+-+.-.. ..++.+.|.+. ..+.|+++ ..-+++++|
T Consensus 155 r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~---T~~hqvR~Y 231 (412)
T KOG3881|consen 155 RQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATI---TRYHQVRLY 231 (412)
T ss_pred ccCCCCCceEecCchhcccceeeeecccceeeeeccCCCCccccceeeeeeccceecCCCCCceEEEE---ecceeEEEe
Confidence 666644 456668888 8899999998854443322111 12456667665 14555666 589999999
Q ss_pred eCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeee
Q psy14130 294 DENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVT 373 (494)
Q Consensus 294 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~ 373 (494)
|.+..+.|.....+ ...++.++...|+++.+ .+|..-|.+..||++.++.....+... .+.++++..+|...++++
T Consensus 232 Dt~~qRRPV~~fd~-~E~~is~~~l~p~gn~I-y~gn~~g~l~~FD~r~~kl~g~~~kg~--tGsirsih~hp~~~~las 307 (412)
T KOG3881|consen 232 DTRHQRRPVAQFDF-LENPISSTGLTPSGNFI-YTGNTKGQLAKFDLRGGKLLGCGLKGI--TGSIRSIHCHPTHPVLAS 307 (412)
T ss_pred cCcccCcceeEecc-ccCcceeeeecCCCcEE-EEecccchhheecccCceeeccccCCc--cCCcceEEEcCCCceEEe
Confidence 99988888766544 35789999999999998 788899999999999998765545444 467999999999998888
Q ss_pred c--cceeEEEEeeC
Q psy14130 374 Q--CEIFRFFKLHT 385 (494)
Q Consensus 374 ~--~~~~~~~~l~~ 385 (494)
. |..+||+++.+
T Consensus 308 ~GLDRyvRIhD~kt 321 (412)
T KOG3881|consen 308 CGLDRYVRIHDIKT 321 (412)
T ss_pred eccceeEEEeeccc
Confidence 5 99999999987
|
|
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=99.27 E-value=5.4e-08 Score=93.21 Aligned_cols=184 Identities=14% Similarity=0.150 Sum_probs=116.6
Q ss_pred ccEEEEEEcCCCCCEEEEE-eCCCeEEEEECCCCe--E--EEEec-CCCCceEEEEEcCCCCEEEEEe-CCCeEEEEeCC
Q psy14130 177 RRVGYIEWHPTAENVVASA-GFDYLIILWDVGKGE--A--LTVID-CHPDVINCLSFNRDGSRLVTTC-KDKTVRVLDPR 249 (494)
Q Consensus 177 ~~V~~~~~~p~~~~~l~s~-s~d~~v~iwd~~~~~--~--~~~~~-~h~~~v~~l~~~~~~~~l~s~~-~d~~v~iwd~~ 249 (494)
....++.|+|++ +++++. -....|.+|++.... . ...+. ........++|+|++++++... .+++|.++++.
T Consensus 144 ~h~H~v~~~pdg-~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~ 222 (345)
T PF10282_consen 144 PHPHQVVFSPDG-RFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYD 222 (345)
T ss_dssp TCEEEEEE-TTS-SEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEE
T ss_pred ccceeEEECCCC-CEEEEEecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeec
Confidence 446789999998 455554 334589999997654 2 22222 3456789999999999886665 57889999988
Q ss_pred --CCc--eEEEeeec----C-CCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCC-CCceeEeeecC-CCceEEeEE
Q psy14130 250 --TGL--VISQGVCH----P-GTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDL-NTPLALETVDS-SSGVLFPYY 318 (494)
Q Consensus 250 --~~~--~~~~~~~~----~-~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~-~~~~~~~~~~~-~~~v~~~~~ 318 (494)
++. .++.+... . ......+.++|++..++++. .....|.+|++... ........... ....+.+++
T Consensus 223 ~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsn---r~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~ 299 (345)
T PF10282_consen 223 PSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSN---RGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAF 299 (345)
T ss_dssp TTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEE---CTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE
T ss_pred ccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEe---ccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEE
Confidence 443 22222211 1 11367889999987888877 67889999999432 23333333332 345789999
Q ss_pred eCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEE
Q psy14130 319 DHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGF 364 (494)
Q Consensus 319 ~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~ 364 (494)
+|+|++|+++...++.|.+|++....-..........-....+|.|
T Consensus 300 s~~g~~l~Va~~~s~~v~vf~~d~~tG~l~~~~~~~~~~~p~ci~f 345 (345)
T PF10282_consen 300 SPDGRYLYVANQDSNTVSVFDIDPDTGKLTPVGSSVPIPSPVCIVF 345 (345)
T ss_dssp -TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEEESSSEEEEEE
T ss_pred eCCCCEEEEEecCCCeEEEEEEeCCCCcEEEecccccCCCCEEEeC
Confidence 9999999888888999999998643322333332222233455554
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=4.8e-09 Score=103.03 Aligned_cols=204 Identities=15% Similarity=0.063 Sum_probs=122.9
Q ss_pred ecccccccEEEEEEcCCCCC--EEEEEeCCC--eEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeC-----CC
Q psy14130 171 DLHGHKRRVGYIEWHPTAEN--VVASAGFDY--LIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCK-----DK 241 (494)
Q Consensus 171 ~~~~h~~~V~~~~~~p~~~~--~l~s~s~d~--~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~-----d~ 241 (494)
.+......+.+-+|+|+|.. ++++...++ .|.+.++.+++... +....+.....+|+|||+.|+..+. |.
T Consensus 179 ~lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~-lt~~~g~~~~p~wSPDG~~Laf~s~~~g~~di 257 (428)
T PRK01029 179 PLTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKK-ILALQGNQLMPTFSPRKKLLAFISDRYGNPDL 257 (428)
T ss_pred EcccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceE-eecCCCCccceEECCCCCEEEEEECCCCCcce
Confidence 34445556678899999854 233444443 57888888775433 3334455567899999998887653 33
Q ss_pred eEEEEeCCCC---ceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEE--eCCCC-CCceeEeeecCCCceEE
Q psy14130 242 TVRVLDPRTG---LVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLW--DENDL-NTPLALETVDSSSGVLF 315 (494)
Q Consensus 242 ~v~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iw--d~~~~-~~~~~~~~~~~~~~v~~ 315 (494)
.+.+||+..+ +..+....+... .....|+|++..++.+. ..++...+| ++... ..+..+. .....+..
T Consensus 258 ~~~~~~~~~g~~g~~~~lt~~~~~~-~~~p~wSPDG~~Laf~s---~~~g~~~ly~~~~~~~g~~~~~lt--~~~~~~~~ 331 (428)
T PRK01029 258 FIQSFSLETGAIGKPRRLLNEAFGT-QGNPSFSPDGTRLVFVS---NKDGRPRIYIMQIDPEGQSPRLLT--KKYRNSSC 331 (428)
T ss_pred eEEEeecccCCCCcceEeecCCCCC-cCCeEECCCCCEEEEEE---CCCCCceEEEEECcccccceEEec--cCCCCccc
Confidence 4555777653 322222222222 45679999987788776 455644454 44321 1122121 12245677
Q ss_pred eEEeCCCCEEEEEEeCC--CcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec-----cceeEEEEeeC
Q psy14130 316 PYYDHDTRILFLAGKGD--GNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ-----CEIFRFFKLHT 385 (494)
Q Consensus 316 ~~~~~~~~~l~~~g~~d--g~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~-----~~~~~~~~l~~ 385 (494)
+.|+|||+.|+.++..+ ..|.+||+.+++. ..+... ...+....|+||+..++.. ...+.++++..
T Consensus 332 p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~--~~Lt~~--~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~ 404 (428)
T PRK01029 332 PAWSPDGKKIAFCSVIKGVRQICVYDLATGRD--YQLTTS--PENKESPSWAIDSLHLVYSAGNSNESELYLISLIT 404 (428)
T ss_pred eeECCCCCEEEEEEcCCCCcEEEEEECCCCCe--EEccCC--CCCccceEECCCCCEEEEEECCCCCceEEEEECCC
Confidence 89999999996665443 3699999988875 222221 2346778999999866531 33455555544
|
|
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=4.2e-09 Score=104.23 Aligned_cols=203 Identities=15% Similarity=0.140 Sum_probs=125.9
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEe-CCC--eEEEEECCCCeEEEEecCCCCceEEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAG-FDY--LIILWDVGKGEALTVIDCHPDVINCLS 226 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s-~d~--~v~iwd~~~~~~~~~~~~h~~~v~~l~ 226 (494)
.+.++|.... .. +.+..+...+.+..|+|+|. .|+..+ .++ .|.+||+.+++... +....+.....+
T Consensus 199 ~l~i~d~dG~-------~~-~~l~~~~~~~~~p~wSPDG~-~La~~s~~~g~~~L~~~dl~tg~~~~-lt~~~g~~~~~~ 268 (448)
T PRK04792 199 QLMIADYDGY-------NE-QMLLRSPEPLMSPAWSPDGR-KLAYVSFENRKAEIFVQDIYTQVREK-VTSFPGINGAPR 268 (448)
T ss_pred EEEEEeCCCC-------Cc-eEeecCCCcccCceECCCCC-EEEEEEecCCCcEEEEEECCCCCeEE-ecCCCCCcCCee
Confidence 4666676544 11 34445677889999999994 555544 333 68899998876432 322233445789
Q ss_pred EcCCCCEEEE-EeCCCe--EEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCcee
Q psy14130 227 FNRDGSRLVT-TCKDKT--VRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLA 303 (494)
Q Consensus 227 ~~~~~~~l~s-~~~d~~--v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~ 303 (494)
|+|||+.|+. .+.++. |.++|+.+++. ..+..+... .....|+|++..++.++ .......|.++|+.+... ..
T Consensus 269 wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~-~~lt~~~~~-~~~p~wSpDG~~I~f~s-~~~g~~~Iy~~dl~~g~~-~~ 344 (448)
T PRK04792 269 FSPDGKKLALVLSKDGQPEIYVVDIATKAL-TRITRHRAI-DTEPSWHPDGKSLIFTS-ERGGKPQIYRVNLASGKV-SR 344 (448)
T ss_pred ECCCCCEEEEEEeCCCCeEEEEEECCCCCe-EECccCCCC-ccceEECCCCCEEEEEE-CCCCCceEEEEECCCCCE-EE
Confidence 9999997765 456664 77889887764 344444433 56788999987777776 111234577777765432 22
Q ss_pred EeeecCCCceEEeEEeCCCCEEEEEEeCCCc--EEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeee
Q psy14130 304 LETVDSSSGVLFPYYDHDTRILFLAGKGDGN--IRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVT 373 (494)
Q Consensus 304 ~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~--i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~ 373 (494)
+. . .......+.|+|||+.|+.++..++. |.++|+.+++. ..+... ......+|+|+|..++.
T Consensus 345 Lt-~-~g~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~--~~lt~~---~~d~~ps~spdG~~I~~ 409 (448)
T PRK04792 345 LT-F-EGEQNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAM--QVLTST---RLDESPSVAPNGTMVIY 409 (448)
T ss_pred Ee-c-CCCCCcCeeECCCCCEEEEEEecCCceEEEEEECCCCCe--EEccCC---CCCCCceECCCCCEEEE
Confidence 21 1 11223457899999999777665664 44567666653 223221 11234579999987655
|
|
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.25 E-value=6.3e-08 Score=87.30 Aligned_cols=207 Identities=14% Similarity=0.215 Sum_probs=147.4
Q ss_pred EEEEEcCCCCCEEEEEeC-CCeEEEEECCC-CeE---EEEecCCCCc----------eEEEEEcCCCCEEEEEeC-CCeE
Q psy14130 180 GYIEWHPTAENVVASAGF-DYLIILWDVGK-GEA---LTVIDCHPDV----------INCLSFNRDGSRLVTTCK-DKTV 243 (494)
Q Consensus 180 ~~~~~~p~~~~~l~s~s~-d~~v~iwd~~~-~~~---~~~~~~h~~~----------v~~l~~~~~~~~l~s~~~-d~~v 243 (494)
+.+++++++ ++++++.. -|.|.++-++. |.. +..+ .|.+. +....+.|++++|++.+. -.+|
T Consensus 92 ~yvsvd~~g-~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~-~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri 169 (346)
T COG2706 92 CYVSVDEDG-RFVFVANYHSGSVSVYPLQADGSLQPVVQVV-KHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRI 169 (346)
T ss_pred eEEEECCCC-CEEEEEEccCceEEEEEcccCCccccceeee-ecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceE
Confidence 789999998 57777754 57999999865 432 2222 35555 888999999999998873 4579
Q ss_pred EEEeCCCCceEEE--eeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCC-CceeEe-------eecCCCce
Q psy14130 244 RVLDPRTGLVISQ--GVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLN-TPLALE-------TVDSSSGV 313 (494)
Q Consensus 244 ~iwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~-~~~~~~-------~~~~~~~v 313 (494)
.+|++..|++... .....+.....++|+|++....... --+++|.+|...... ....++ .+......
T Consensus 170 ~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~---EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~ 246 (346)
T COG2706 170 FLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVN---ELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWA 246 (346)
T ss_pred EEEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEe---ccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCce
Confidence 9999998873221 1123333368999999977777777 679999999987631 111122 12344667
Q ss_pred EEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccC-CCCeeEEEEecCCceeeec---cceeEEEEeeCCCCe
Q psy14130 314 LFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLS-GAPQRGLGFMPKRGCDVTQ---CEIFRFFKLHTTRNM 389 (494)
Q Consensus 314 ~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~-~~~v~~~~~~p~~~~~~~~---~~~~~~~~l~~~~~~ 389 (494)
..+..++||++||++--+...|.+|.+........+...... +...+.+.|+|.+.+++.. +..+.+|..+...+.
T Consensus 247 aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~~TG~ 326 (346)
T COG2706 247 AAIHISPDGRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAANQKSDNITVFERDKETGR 326 (346)
T ss_pred eEEEECCCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCCCEEEEEccCCCcEEEEEEcCCCce
Confidence 788999999999999888889999999865443454444333 3448999999999988874 567899988764444
Q ss_pred EE
Q psy14130 390 CE 391 (494)
Q Consensus 390 ~~ 391 (494)
+.
T Consensus 327 L~ 328 (346)
T COG2706 327 LT 328 (346)
T ss_pred EE
Confidence 43
|
|
| >KOG0280|consensus | Back alignment and domain information |
|---|
Probab=99.23 E-value=4.1e-09 Score=91.76 Aligned_cols=226 Identities=15% Similarity=0.125 Sum_probs=158.0
Q ss_pred EcCcEEEEEcCCCCCCCCcccceEecc-cccccEEEEEEcC---CCCCEEEEEeCCCeEEEEECCCCeEEEEecCCC---
Q psy14130 147 PIHRVKLWYIPDGGLSGNLNEWIMDLH-GHKRRVGYIEWHP---TAENVVASAGFDYLIILWDVGKGEALTVIDCHP--- 219 (494)
Q Consensus 147 ~~~~v~iw~~~~~~~~~~~~~~~~~~~-~h~~~V~~~~~~p---~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~--- 219 (494)
..+++.+|++.+.++.. + .+++ -.+..+..+.|.- +|.-.|+-+..+|.|.++..........+.+-.
T Consensus 44 R~Gkl~Lys~~d~~~~~-l----~~~q~~dts~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~k 118 (339)
T KOG0280|consen 44 RSGKLHLYSLEDMKLSP-L----DTLQCTDTSTEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKK 118 (339)
T ss_pred eccceEEEeecccccCc-c----ceeeeecccccceeeeeeccCCccceeeeccccceEEEEeeccceeeeeecccchhh
Confidence 44578999998876543 1 1111 1345567777753 332367777888999999876655544444321
Q ss_pred ---CceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce--EEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEe
Q psy14130 220 ---DVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLV--ISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWD 294 (494)
Q Consensus 220 ---~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd 294 (494)
....++.|++.+..++++..+|.+.+-+.....+ +++++.|.-. ...+.|+.....++.+| ++|+.+..||
T Consensus 119 i~~~~~lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E-~Wta~f~~~~pnlvytG---gDD~~l~~~D 194 (339)
T KOG0280|consen 119 ISVVEALSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFE-AWTAKFSDKEPNLVYTG---GDDGSLSCWD 194 (339)
T ss_pred hhheeeeEEEeeccCceEEEEcCCCcEEEEecceeeeeeccccccccee-eeeeecccCCCceEEec---CCCceEEEEE
Confidence 1245788999999999999999999666555543 4478899877 78888988888999999 8999999999
Q ss_pred CCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEee-CCCceEEecccccCCCCeeEEEEecCCc---e
Q psy14130 295 ENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELT-NERPYIHFLNQSLSGAPQRGLGFMPKRG---C 370 (494)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~-~~~~~~~~~~~~~~~~~v~~~~~~p~~~---~ 370 (494)
+|-...-.-....-|..+|.++.-+|.....+++|+.|-.|++||.+ .++|+.. -...+.|+.+.++|.-. +
T Consensus 195 ~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~----~~v~GGVWRi~~~p~~~~~lL 270 (339)
T KOG0280|consen 195 IRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFK----AKVGGGVWRIKHHPEIFHRLL 270 (339)
T ss_pred ecCCcceeeecceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCcccc----CccccceEEEEecchhhhHHH
Confidence 99433222222234678899998888766666999999999999999 5666432 22347799999999644 2
Q ss_pred eeeccceeEEEEeeC
Q psy14130 371 DVTQCEIFRFFKLHT 385 (494)
Q Consensus 371 ~~~~~~~~~~~~l~~ 385 (494)
.++--+-.++.+...
T Consensus 271 ~~CMh~G~ki~~~~~ 285 (339)
T KOG0280|consen 271 AACMHNGAKILDSSD 285 (339)
T ss_pred HHHHhcCceEEEecc
Confidence 222344556666655
|
|
| >KOG1354|consensus | Back alignment and domain information |
|---|
Probab=99.20 E-value=2.4e-09 Score=95.05 Aligned_cols=156 Identities=17% Similarity=0.168 Sum_probs=102.6
Q ss_pred ecCCcEEEEEEcCcEEEEEcCCCCCCCCccc-ceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeE----
Q psy14130 137 VAGGGAFLVLPIHRVKLWYIPDGGLSGNLNE-WIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEA---- 211 (494)
Q Consensus 137 ~~~~g~~~~~~~~~v~iw~~~~~~~~~~~~~-~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~---- 211 (494)
.++...++...+=+|-+|+++-....-++.. .-..+..-+.-|++..|||...++++-.+..|+|++-|++....
T Consensus 173 NsD~Et~lSADdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~h 252 (433)
T KOG1354|consen 173 NSDKETFLSADDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAH 252 (433)
T ss_pred cCccceEeeccceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcch
Confidence 3445555556666799999875432211100 00122223456899999999878999999999999999984321
Q ss_pred EEEe------------cCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeC-CCCceEEEeeecCCC--------------C
Q psy14130 212 LTVI------------DCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDP-RTGLVISQGVCHPGT--------------R 264 (494)
Q Consensus 212 ~~~~------------~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~-~~~~~~~~~~~~~~~--------------~ 264 (494)
...+ .+--..|..+.|+++|+++++-+. -+|++||+ ...+++.++..|..- .
T Consensus 253 sKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~Ifd 331 (433)
T KOG1354|consen 253 SKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFD 331 (433)
T ss_pred hhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEecc-ceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhh
Confidence 1111 112246888999999999998764 48999999 556677777766421 1
Q ss_pred ceEEEEECCCCeEEEEEecCCCCceEEEEeCCC
Q psy14130 265 SSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEND 297 (494)
Q Consensus 265 ~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~ 297 (494)
-..++|+.++. .+.+| +-...+++|++..
T Consensus 332 KFec~~sg~~~-~v~TG---sy~n~frvf~~~~ 360 (433)
T KOG1354|consen 332 KFECSWSGNDS-YVMTG---SYNNVFRVFNLAR 360 (433)
T ss_pred eeEEEEcCCcc-eEecc---cccceEEEecCCC
Confidence 34677888744 45555 5688899999543
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=99.20 E-value=6.1e-09 Score=99.67 Aligned_cols=188 Identities=16% Similarity=0.102 Sum_probs=129.4
Q ss_pred EEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEE
Q psy14130 191 VVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVF 270 (494)
Q Consensus 191 ~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 270 (494)
++++-..++.|.+.|..+.+.+..+......-..+.|+|||+++++++.|+.|.++|+.+++.+.++..... ...+++
T Consensus 8 ~~V~~~~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~~--~~~i~~ 85 (369)
T PF02239_consen 8 FYVVERGSGSVAVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGGN--PRGIAV 85 (369)
T ss_dssp EEEEEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SSE--EEEEEE
T ss_pred EEEEecCCCEEEEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCCC--cceEEE
Confidence 345566789999999999999999986555555688999999999999999999999999999999876554 588999
Q ss_pred ECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec-----CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCc
Q psy14130 271 IGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD-----SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERP 345 (494)
Q Consensus 271 ~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~ 345 (494)
++++..++++. ...+.+.++|.++.+....+.... ....+..+..+|....++++-..-+.|.+-|....++
T Consensus 86 s~DG~~~~v~n---~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~ 162 (369)
T PF02239_consen 86 SPDGKYVYVAN---YEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKN 162 (369)
T ss_dssp --TTTEEEEEE---EETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSC
T ss_pred cCCCCEEEEEe---cCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccc
Confidence 99987888777 478999999998865533332211 1235667777888886656666668888888777654
Q ss_pred eEEecccccCCCCeeEEEEecCCceeee---ccceeEEEEeeC
Q psy14130 346 YIHFLNQSLSGAPQRGLGFMPKRGCDVT---QCEIFRFFKLHT 385 (494)
Q Consensus 346 ~~~~~~~~~~~~~v~~~~~~p~~~~~~~---~~~~~~~~~l~~ 385 (494)
+.. .....+.......|.|++.+++. +...+-+++..+
T Consensus 163 ~~~--~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~ 203 (369)
T PF02239_consen 163 LKV--TTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKT 203 (369)
T ss_dssp EEE--EEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTT
T ss_pred cce--eeecccccccccccCcccceeeecccccceeEEEeecc
Confidence 322 22334566788999999886644 255666777665
|
... |
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=4.1e-08 Score=97.42 Aligned_cols=196 Identities=15% Similarity=0.146 Sum_probs=121.3
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCC--eEEEEECCCCeEEEEecCCCCceEEEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDY--LIILWDVGKGEALTVIDCHPDVINCLSF 227 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~--~v~iwd~~~~~~~~~~~~h~~~v~~l~~ 227 (494)
.|.+|++.++.. ..+....+.+...+|+|+|..++++.+.++ .|.+||+.+++.. .+..+........|
T Consensus 224 ~l~~~~l~~g~~--------~~l~~~~g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~~-~lt~~~~~~~~~~~ 294 (430)
T PRK00178 224 RIFVQNLDTGRR--------EQITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQLS-RVTNHPAIDTEPFW 294 (430)
T ss_pred EEEEEECCCCCE--------EEccCCCCCcCCeEECCCCCEEEEEEccCCCceEEEEECCCCCeE-EcccCCCCcCCeEE
Confidence 588899987632 122223334557899999954555666555 6888899877643 45556666778899
Q ss_pred cCCCCEEEEEeC-C--CeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCc--eEEEEeCCCCCCce
Q psy14130 228 NRDGSRLVTTCK-D--KTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDR--QVGLWDENDLNTPL 302 (494)
Q Consensus 228 ~~~~~~l~s~~~-d--~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~--~i~iwd~~~~~~~~ 302 (494)
+|||+.|+..+. + ..|.++|+.+++... +...... .....|+|++..++.+. ..++ .|.+||+.+... .
T Consensus 295 spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~-lt~~~~~-~~~~~~Spdg~~i~~~~---~~~~~~~l~~~dl~tg~~-~ 368 (430)
T PRK00178 295 GKDGRTLYFTSDRGGKPQIYKVNVNGGRAER-VTFVGNY-NARPRLSADGKTLVMVH---RQDGNFHVAAQDLQRGSV-R 368 (430)
T ss_pred CCCCCEEEEEECCCCCceEEEEECCCCCEEE-eecCCCC-ccceEECCCCCEEEEEE---ccCCceEEEEEECCCCCE-E
Confidence 999998876664 3 357778888777432 2222222 34568999987777776 3333 588899876543 2
Q ss_pred eEeeecCCCceEEeEEeCCCCEEEEEEeCCCc--EEEEEeeCCCceEEecccccCCCCeeEEEEecC
Q psy14130 303 ALETVDSSSGVLFPYYDHDTRILFLAGKGDGN--IRYYELTNERPYIHFLNQSLSGAPQRGLGFMPK 367 (494)
Q Consensus 303 ~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~--i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 367 (494)
.+. .......+.|+|||+.++.+...+|. |.++++.... ...+.. ....+...+|+|-
T Consensus 369 ~lt---~~~~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~~g~~--~~~l~~--~~g~~~~p~ws~~ 428 (430)
T PRK00178 369 ILT---DTSLDESPSVAPNGTMLIYATRQQGRGVLMLVSINGRV--RLPLPT--AQGEVREPSWSPY 428 (430)
T ss_pred Ecc---CCCCCCCceECCCCCEEEEEEecCCceEEEEEECCCCc--eEECcC--CCCCcCCCccCCC
Confidence 221 11223357899999999777655554 5555554332 222221 1334666777763
|
|
| >KOG0280|consensus | Back alignment and domain information |
|---|
Probab=99.16 E-value=2.8e-09 Score=92.76 Aligned_cols=159 Identities=12% Similarity=0.031 Sum_probs=122.7
Q ss_pred EEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeE--EEEecCCCCceEEEEEcC-CCCEEEEEeCCCeEEEEeCCCC-ceE
Q psy14130 179 VGYIEWHPTAENVVASAGFDYLIILWDVGKGEA--LTVIDCHPDVINCLSFNR-DGSRLVTTCKDKTVRVLDPRTG-LVI 254 (494)
Q Consensus 179 V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~--~~~~~~h~~~v~~l~~~~-~~~~l~s~~~d~~v~iwd~~~~-~~~ 254 (494)
..++.|++.+ ..++++-.+|.+.+-+...... ++.+++|+-.+....|+. +.+++.+|+.|+.+..||+|.. +.+
T Consensus 124 ~lslD~~~~~-~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i 202 (339)
T KOG0280|consen 124 ALSLDISTSG-TKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFI 202 (339)
T ss_pred eeEEEeeccC-ceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCccee
Confidence 4578899988 6788888899998766655443 447889999999999987 4568899999999999999943 333
Q ss_pred EE-eeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCC
Q psy14130 255 SQ-GVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDG 333 (494)
Q Consensus 255 ~~-~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg 333 (494)
.. .+-|... +.++.-+|..+..+++| +-|..|++||.|+..+|+.-.. ..++|..+.++|.-...++.++.-+
T Consensus 203 ~~n~kvH~~G-V~SI~ss~~~~~~I~TG---sYDe~i~~~DtRnm~kPl~~~~--v~GGVWRi~~~p~~~~~lL~~CMh~ 276 (339)
T KOG0280|consen 203 WHNSKVHTSG-VVSIYSSPPKPTYIATG---SYDECIRVLDTRNMGKPLFKAK--VGGGVWRIKHHPEIFHRLLAACMHN 276 (339)
T ss_pred eecceeeecc-eEEEecCCCCCceEEEe---ccccceeeeehhcccCccccCc--cccceEEEEecchhhhHHHHHHHhc
Confidence 33 4567776 88888888889999999 8999999999998777765433 4478999999997654434445555
Q ss_pred cEEEEEeeCCC
Q psy14130 334 NIRYYELTNER 344 (494)
Q Consensus 334 ~i~~wd~~~~~ 344 (494)
-.+|-++..+.
T Consensus 277 G~ki~~~~~~~ 287 (339)
T KOG0280|consen 277 GAKILDSSDKV 287 (339)
T ss_pred CceEEEecccc
Confidence 67787777654
|
|
| >KOG0974|consensus | Back alignment and domain information |
|---|
Probab=99.15 E-value=5.1e-10 Score=112.75 Aligned_cols=134 Identities=25% Similarity=0.259 Sum_probs=112.8
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEE-EecCCCCceEEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALT-VIDCHPDVINCLSF 227 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~-~~~~h~~~v~~l~~ 227 (494)
+.|.+|+.... ..-..+.||.+.|.++.|+.+| .++++.|+|.++|+|++.+++... +.-+|..+|..++|
T Consensus 155 ~~iivW~~~~d-------n~p~~l~GHeG~iF~i~~s~dg-~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~ 226 (967)
T KOG0974|consen 155 GEIIVWKPHED-------NKPIRLKGHEGSIFSIVTSLDG-RYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCF 226 (967)
T ss_pred ccEEEEecccc-------CCcceecccCCceEEEEEccCC-cEEEEEecCcceeeeecccccccCcccccccceeEEEEe
Confidence 46999998743 2223688999999999999998 799999999999999999987665 55679999999999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCC
Q psy14130 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEND 297 (494)
Q Consensus 228 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~ 297 (494)
.|+ .++|++.|.+.++|+.. ++.+..+..|.+..+.+++..+. ..+..++ ..|+.+++||+..
T Consensus 227 ~~n--~i~t~gedctcrvW~~~-~~~l~~y~~h~g~~iw~~~~~~~-~~~~vT~---g~Ds~lk~~~l~~ 289 (967)
T KOG0974|consen 227 LPN--RIITVGEDCTCRVWGVN-GTQLEVYDEHSGKGIWKIAVPIG-VIIKVTG---GNDSTLKLWDLNG 289 (967)
T ss_pred ccc--eeEEeccceEEEEEecc-cceehhhhhhhhcceeEEEEcCC-ceEEEee---ccCcchhhhhhhc
Confidence 988 99999999999999765 56667889998887888888777 5555555 5899999999754
|
|
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.3e-08 Score=99.04 Aligned_cols=195 Identities=13% Similarity=0.095 Sum_probs=119.4
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCe--EEEEECCCCeEEEEecCCCCceEEEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYL--IILWDVGKGEALTVIDCHPDVINCLSF 227 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~--v~iwd~~~~~~~~~~~~h~~~v~~l~~ 227 (494)
.|.+||+.++.. ..+..+. +.....+|+|+|..++++.+.++. |.++|+.+++. ..+..+.......+|
T Consensus 243 ~L~~~dl~tg~~-----~~lt~~~---g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~-~~lt~~~~~~~~p~w 313 (448)
T PRK04792 243 EIFVQDIYTQVR-----EKVTSFP---GINGAPRFSPDGKKLALVLSKDGQPEIYVVDIATKAL-TRITRHRAIDTEPSW 313 (448)
T ss_pred EEEEEECCCCCe-----EEecCCC---CCcCCeeECCCCCEEEEEEeCCCCeEEEEEECCCCCe-EECccCCCCccceEE
Confidence 588889877632 1222222 233478999999655556676774 88889887764 445556666778999
Q ss_pred cCCCCEEEEEeC-CC--eEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCc--eEEEEeCCCCCCce
Q psy14130 228 NRDGSRLVTTCK-DK--TVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDR--QVGLWDENDLNTPL 302 (494)
Q Consensus 228 ~~~~~~l~s~~~-d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~--~i~iwd~~~~~~~~ 302 (494)
+|||+.|+..+. ++ .|.++|+.+++... +...... .....|+|++..++.++ ..++ .|.++|+.+... .
T Consensus 314 SpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~-Lt~~g~~-~~~~~~SpDG~~l~~~~---~~~g~~~I~~~dl~~g~~-~ 387 (448)
T PRK04792 314 HPDGKSLIFTSERGGKPQIYRVNLASGKVSR-LTFEGEQ-NLGGSITPDGRSMIMVN---RTNGKFNIARQDLETGAM-Q 387 (448)
T ss_pred CCCCCEEEEEECCCCCceEEEEECCCCCEEE-EecCCCC-CcCeeECCCCCEEEEEE---ecCCceEEEEEECCCCCe-E
Confidence 999998876653 33 56777888776433 2222222 34568999988887776 3344 456677766432 1
Q ss_pred eEeeecCCCceEEeEEeCCCCEEEEEEeCCCc--EEEEEeeCCCceEEecccccCCCCeeEEEEec
Q psy14130 303 ALETVDSSSGVLFPYYDHDTRILFLAGKGDGN--IRYYELTNERPYIHFLNQSLSGAPQRGLGFMP 366 (494)
Q Consensus 303 ~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~--i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p 366 (494)
.+. .......+.|+|||+.|+.+...++. +++++.. ++. ...+.. ....+...+|+|
T Consensus 388 ~lt---~~~~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~~-G~~-~~~l~~--~~g~~~~p~Wsp 446 (448)
T PRK04792 388 VLT---STRLDESPSVAPNGTMVIYSTTYQGKQVLAAVSID-GRF-KARLPA--GQGEVKSPAWSP 446 (448)
T ss_pred Ecc---CCCCCCCceECCCCCEEEEEEecCCceEEEEEECC-CCc-eEECcC--CCCCcCCCccCC
Confidence 111 11122356899999999777666665 5666653 433 222322 133466777776
|
|
| >KOG1354|consensus | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.7e-09 Score=94.81 Aligned_cols=213 Identities=12% Similarity=0.185 Sum_probs=146.4
Q ss_pred ccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe-----EEEEecCCC------------CceEEEEEcCCCC--EEE
Q psy14130 175 HKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE-----ALTVIDCHP------------DVINCLSFNRDGS--RLV 235 (494)
Q Consensus 175 h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~-----~~~~~~~h~------------~~v~~l~~~~~~~--~l~ 235 (494)
...-|.++.|...| .+||+|..+|.|.++.-.... ....++.|. +.|..+.|.+++. .++
T Consensus 24 eadiis~vef~~~G-e~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FL 102 (433)
T KOG1354|consen 24 EADIISAVEFDHYG-ERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFL 102 (433)
T ss_pred hhcceeeEEeeccc-ceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEE
Confidence 34568899999999 699999999999998754322 233444453 5688999998654 677
Q ss_pred EEeCCCeEEEEeCCCCceE--------------------E---------------Ee-eecCCCCceEEEEECCCCeEEE
Q psy14130 236 TTCKDKTVRVLDPRTGLVI--------------------S---------------QG-VCHPGTRSSKAVFIGDTGRIVT 279 (494)
Q Consensus 236 s~~~d~~v~iwd~~~~~~~--------------------~---------------~~-~~~~~~~~~~~~~~~~~~~l~~ 279 (494)
..+.|++|++|-++..... . .+ .+|.-. +.++.++.+...+++
T Consensus 103 lstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyh-iNSIS~NsD~Et~lS 181 (433)
T KOG1354|consen 103 LSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYH-INSISVNSDKETFLS 181 (433)
T ss_pred EecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeE-eeeeeecCccceEee
Confidence 7889999999987532210 0 01 134433 778888888666655
Q ss_pred EEecCCCCceEEEEeCCCCCCceeEeeecCC------CceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCce---EEec
Q psy14130 280 TGFSRHSDRQVGLWDENDLNTPLALETVDSS------SGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPY---IHFL 350 (494)
Q Consensus 280 ~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~------~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~---~~~~ 350 (494)
+ +|=.|.+|+++-......+..+... .-|++..|+|..-.+|+-.+..|+|++-|++..... .++.
T Consensus 182 A-----DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlf 256 (433)
T KOG1354|consen 182 A-----DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLF 256 (433)
T ss_pred c-----cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhh
Confidence 4 4889999998865554444443322 236788999988888788899999999999843210 0000
Q ss_pred cccc----------CCCCeeEEEEecCCceeeecc-ceeEEEEeeCCCCeEEEeE
Q psy14130 351 NQSL----------SGAPQRGLGFMPKRGCDVTQC-EIFRFFKLHTTRNMCEPIS 394 (494)
Q Consensus 351 ~~~~----------~~~~v~~~~~~p~~~~~~~~~-~~~~~~~l~~~~~~~~~~~ 394 (494)
.... --..|..+.|++.|.++++.| -++++|+++.....++...
T Consensus 257 Eepedp~~rsffseiIsSISDvKFs~sGryilsRDyltvk~wD~nme~~pv~t~~ 311 (433)
T KOG1354|consen 257 EEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDYLTVKLWDLNMEAKPVETYP 311 (433)
T ss_pred ccccCCcchhhHHHHhhhhhceEEccCCcEEEEeccceeEEEeccccCCcceEEe
Confidence 0000 124578899999999999987 7899999977444454433
|
|
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=3.2e-08 Score=97.25 Aligned_cols=202 Identities=15% Similarity=0.122 Sum_probs=120.5
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCC----eEEEEECCCC---eEEEEecCCCCce
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDY----LIILWDVGKG---EALTVIDCHPDVI 222 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~----~v~iwd~~~~---~~~~~~~~h~~~v 222 (494)
.|.+.++.++.. ..+..+ .+.....+|+|+|..++++...+| .+.+|++..+ +.......+.+..
T Consensus 212 ~I~~~~l~~g~~-----~~lt~~---~g~~~~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~ 283 (428)
T PRK01029 212 KIFLGSLENPAG-----KKILAL---QGNQLMPTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQ 283 (428)
T ss_pred eEEEEECCCCCc-----eEeecC---CCCccceEECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCc
Confidence 577888876632 222223 334456899999954444443333 3445777652 3333333333445
Q ss_pred EEEEEcCCCCEEEEEe-CCCeEEEE--eCCC-CceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCC
Q psy14130 223 NCLSFNRDGSRLVTTC-KDKTVRVL--DPRT-GLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDL 298 (494)
Q Consensus 223 ~~l~~~~~~~~l~s~~-~d~~v~iw--d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~ 298 (494)
...+|+|||+.|+..+ .++...+| ++.. +.....+..+... .....|+|++..++.++.. .....|.+||+.+.
T Consensus 284 ~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~-~~~p~wSPDG~~Laf~~~~-~g~~~I~v~dl~~g 361 (428)
T PRK01029 284 GNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRN-SSCPAWSPDGKKIAFCSVI-KGVRQICVYDLATG 361 (428)
T ss_pred CCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEeccCCCC-ccceeECCCCCEEEEEEcC-CCCcEEEEEECCCC
Confidence 6789999999888766 46655555 4432 2233444444333 5678899998888777621 12357999999875
Q ss_pred CCceeEeeecCCCceEEeEEeCCCCEEEEEEeC--CCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCC
Q psy14130 299 NTPLALETVDSSSGVLFPYYDHDTRILFLAGKG--DGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKR 368 (494)
Q Consensus 299 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~--dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~ 368 (494)
... .+. .....+..+.|+|||+.|+.++.. ...|+++|+..++.. .+. . ....+...+|+|-.
T Consensus 362 ~~~-~Lt--~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~~-~Lt-~--~~g~~~~p~Ws~~~ 426 (428)
T PRK01029 362 RDY-QLT--TSPENKESPSWAIDSLHLVYSAGNSNESELYLISLITKKTR-KIV-I--GSGEKRFPSWGAFP 426 (428)
T ss_pred CeE-Ecc--CCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEE-Eee-c--CCCcccCceecCCC
Confidence 432 221 122345678999999998666543 356888888877642 222 1 23446677888753
|
|
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.3e-08 Score=99.05 Aligned_cols=166 Identities=15% Similarity=0.175 Sum_probs=109.3
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCC--eEEEEECCCCeEEEEecCCCCceEEEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDY--LIILWDVGKGEALTVIDCHPDVINCLSF 227 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~--~v~iwd~~~~~~~~~~~~h~~~v~~l~~ 227 (494)
.|.+||+.++.. ..+..+...+.+++|+|++..++++.+.++ .|.+||+.+++. ..+..+........|
T Consensus 215 ~i~v~d~~~g~~--------~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~ 285 (417)
T TIGR02800 215 EIYVQDLATGQR--------EKVASFPGMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQL-TRLTNGPGIDTEPSW 285 (417)
T ss_pred EEEEEECCCCCE--------EEeecCCCCccceEECCCCCEEEEEECCCCCccEEEEECCCCCE-EECCCCCCCCCCEEE
Confidence 699999987632 123335556778999999954555665554 588999987754 344445555667899
Q ss_pred cCCCCEEEEEeCC-C--eEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCc---eEEEEeCCCCCCc
Q psy14130 228 NRDGSRLVTTCKD-K--TVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDR---QVGLWDENDLNTP 301 (494)
Q Consensus 228 ~~~~~~l~s~~~d-~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~---~i~iwd~~~~~~~ 301 (494)
+|||+.|+.++.. + .|.++|+.+++.. .+..+... .....|+|++..++.+. .++ .|.+||+.+...
T Consensus 286 s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~-~l~~~~~~-~~~~~~spdg~~i~~~~----~~~~~~~i~~~d~~~~~~- 358 (417)
T TIGR02800 286 SPDGKSIAFTSDRGGSPQIYMMDADGGEVR-RLTFRGGY-NASPSWSPDGDLIAFVH----REGGGFNIAVMDLDGGGE- 358 (417)
T ss_pred CCCCCEEEEEECCCCCceEEEEECCCCCEE-EeecCCCC-ccCeEECCCCCEEEEEE----ccCCceEEEEEeCCCCCe-
Confidence 9999988876643 3 6888888877643 34333333 56788999977777766 333 788999876332
Q ss_pred eeEeeecCCCceEEeEEeCCCCEEEEEEeCCCc
Q psy14130 302 LALETVDSSSGVLFPYYDHDTRILFLAGKGDGN 334 (494)
Q Consensus 302 ~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~ 334 (494)
..+ ........+.|+||++.|+++...++.
T Consensus 359 ~~l---~~~~~~~~p~~spdg~~l~~~~~~~~~ 388 (417)
T TIGR02800 359 RVL---TDTGLDESPSFAPNGRMILYATTRGGR 388 (417)
T ss_pred EEc---cCCCCCCCceECCCCCEEEEEEeCCCc
Confidence 111 122234567899999999666555444
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >KOG1064|consensus | Back alignment and domain information |
|---|
Probab=99.13 E-value=4e-10 Score=119.05 Aligned_cols=201 Identities=16% Similarity=0.242 Sum_probs=151.8
Q ss_pred ccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEec-CCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy14130 173 HGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVID-CHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTG 251 (494)
Q Consensus 173 ~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~ 251 (494)
+-+-..|.++.-||.. .+.+||+.||.|++|....++.+..+. .....|+.+.|+.+|+.+..+..||.+-+|... .
T Consensus 2205 k~~v~~v~r~~sHp~~-~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~-p 2282 (2439)
T KOG1064|consen 2205 KHPVENVRRMTSHPSD-PYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQAS-P 2282 (2439)
T ss_pred ecccCceeeecCCCCC-ceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecccC-C
Confidence 3355678888889997 589999999999999999888887765 234889999999999999999999999999987 6
Q ss_pred ceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeC
Q psy14130 252 LVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKG 331 (494)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~ 331 (494)
++.....+|... .....|.. .++++.-..+.++.+.+||..-......+. .-|..++++++|.|..+.| ++|+.
T Consensus 2283 k~~~s~qchnk~-~~Df~Fi~---s~~~tag~s~d~~n~~lwDtl~~~~~s~v~-~~H~~gaT~l~~~P~~qll-isggr 2356 (2439)
T KOG1064|consen 2283 KPYTSWQCHNKA-LSDFRFIG---SLLATAGRSSDNRNVCLWDTLLPPMNSLVH-TCHDGGATVLAYAPKHQLL-ISGGR 2356 (2439)
T ss_pred cceeccccCCcc-ccceeeee---hhhhccccCCCCCcccchhcccCcccceee-eecCCCceEEEEcCcceEE-EecCC
Confidence 778888899887 78888886 344443344678899999965322222222 4477899999999999888 99999
Q ss_pred CCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEeeCCCCeEEEeEE
Q psy14130 332 DGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHTTRNMCEPISM 395 (494)
Q Consensus 332 dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~ 395 (494)
+|.|++||++..+...++ + . +. .+.+++++ .+.++||++..- +.+...++
T Consensus 2357 ~G~v~l~D~rqrql~h~~----~----~----~~-~~~~f~~~ss~g~ikIw~~s~~-~ll~~~p~ 2408 (2439)
T KOG1064|consen 2357 KGEVCLFDIRQRQLRHTF----Q----A----LD-TREYFVTGSSEGNIKIWRLSEF-GLLHTFPS 2408 (2439)
T ss_pred cCcEEEeehHHHHHHHHh----h----h----hh-hhheeeccCcccceEEEEcccc-chhhcCch
Confidence 999999999986642111 1 1 33 44555554 889999999882 34443333
|
|
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.13 E-value=4.6e-07 Score=81.86 Aligned_cols=236 Identities=13% Similarity=0.137 Sum_probs=157.5
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeC---CCeEEEEECCC--CeE--EEEecCCCCce
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGF---DYLIILWDVGK--GEA--LTVIDCHPDVI 222 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~---d~~v~iwd~~~--~~~--~~~~~~h~~~v 222 (494)
.|.+|++.+..-.. ....+..+....+-|+|+|+. +.|.++-. +|.|.-+.+.. |+. +........+.
T Consensus 17 gI~v~~ld~~~g~l----~~~~~v~~~~nptyl~~~~~~-~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p 91 (346)
T COG2706 17 GIYVFNLDTKTGEL----SLLQLVAELGNPTYLAVNPDQ-RHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPP 91 (346)
T ss_pred ceEEEEEeCccccc----chhhhccccCCCceEEECCCC-CEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCC
Confidence 49999998543221 112334467788999999997 67777754 46777776654 442 22222233444
Q ss_pred EEEEEcCCCCEEEEEeC-CCeEEEEeCCC-Cce--EEEeeecCCC---------CceEEEEECCCCeEEEEEecCCCCce
Q psy14130 223 NCLSFNRDGSRLVTTCK-DKTVRVLDPRT-GLV--ISQGVCHPGT---------RSSKAVFIGDTGRIVTTGFSRHSDRQ 289 (494)
Q Consensus 223 ~~l~~~~~~~~l~s~~~-d~~v~iwd~~~-~~~--~~~~~~~~~~---------~~~~~~~~~~~~~l~~~g~~~~~d~~ 289 (494)
+.++++++|++++++.. -|.|.++-++. |.+ ......|.+. .+....+.|++..++++. -.-..
T Consensus 92 ~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~D---LG~Dr 168 (346)
T COG2706 92 CYVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPD---LGTDR 168 (346)
T ss_pred eEEEECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEee---cCCce
Confidence 88999999999999884 68899999865 432 1112223222 155677889977777776 45567
Q ss_pred EEEEeCCCCCC-ceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecc-------cccCCCCeeE
Q psy14130 290 VGLWDENDLNT-PLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLN-------QSLSGAPQRG 361 (494)
Q Consensus 290 i~iwd~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~-------~~~~~~~v~~ 361 (494)
|.+|++..+.. +..........+.+.+.|+|++++.|+..--+++|.+|+........+.++ .+.......+
T Consensus 169 i~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aa 248 (346)
T COG2706 169 IFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAA 248 (346)
T ss_pred EEEEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeE
Confidence 99999985432 112222345678899999999999999999999999999988421122222 2344566778
Q ss_pred EEEecCCceeeec---cceeEEEEeeCCCCeEEEe
Q psy14130 362 LGFMPKRGCDVTQ---CEIFRFFKLHTTRNMCEPI 393 (494)
Q Consensus 362 ~~~~p~~~~~~~~---~~~~~~~~l~~~~~~~~~~ 393 (494)
|..+|+|.++..+ ...|-+|.+....+.++-+
T Consensus 249 Ihis~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~ 283 (346)
T COG2706 249 IHISPDGRFLYASNRGHDSIAVFSVDPDGGKLELV 283 (346)
T ss_pred EEECCCCCEEEEecCCCCeEEEEEEcCCCCEEEEE
Confidence 8999999988764 5578888888754444433
|
|
| >KOG4547|consensus | Back alignment and domain information |
|---|
Probab=99.12 E-value=1e-08 Score=97.52 Aligned_cols=181 Identities=16% Similarity=0.220 Sum_probs=138.9
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEc------C-------------CCCCEEEEEeCCCeEEEEECCCCe
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWH------P-------------TAENVVASAGFDYLIILWDVGKGE 210 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~------p-------------~~~~~l~s~s~d~~v~iwd~~~~~ 210 (494)
.++||+...+++...+ .+...+ ++..++..|. | .+...++-|...|.|.++++..++
T Consensus 16 ~l~iw~t~~~~~~~e~-~p~~~~---s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v~~ys~~~g~ 91 (541)
T KOG4547|consen 16 RLRIWDTAKNQLQQEF-APIASL---SGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSVLLYSVAGGE 91 (541)
T ss_pred eEEEEEccCceeeeee-ccchhc---cCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccEEEEEecCCe
Confidence 6999999988543222 222222 2233344442 1 112468888889999999999998
Q ss_pred EEEEec--CCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCc
Q psy14130 211 ALTVID--CHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDR 288 (494)
Q Consensus 211 ~~~~~~--~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~ 288 (494)
....+. .|.+.|.++.++.+-..|.|++.|+.+..|+....+.++.+.+.... +..++.+|+ +.++.++ .+
T Consensus 92 it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~-~~sl~is~D-~~~l~~a-----s~ 164 (541)
T KOG4547|consen 92 ITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPL-VSSLCISPD-GKILLTA-----SR 164 (541)
T ss_pred EEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCc-cceEEEcCC-CCEEEec-----cc
Confidence 877775 69999999999999999999999999999999999999999887776 899999999 5666666 68
Q ss_pred eEEEEeCCCCCCceeEeeecCCCceEEeEEeCC-----CCEEEEEEeCCCcEEEEEeeCC
Q psy14130 289 QVGLWDENDLNTPLALETVDSSSGVLFPYYDHD-----TRILFLAGKGDGNIRYYELTNE 343 (494)
Q Consensus 289 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~~~l~~~g~~dg~i~~wd~~~~ 343 (494)
+|++||+++.+....+ -+|.+.|.++.|--+ |.+++.+...+..|.+|-+...
T Consensus 165 ~ik~~~~~~kevv~~f--tgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~~ 222 (541)
T KOG4547|consen 165 QIKVLDIETKEVVITF--TGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEKE 222 (541)
T ss_pred eEEEEEccCceEEEEe--cCCCcceEEEEEEEeccccccceeeeccccccceeEEEEEcc
Confidence 9999999986543333 346688999998877 7888677777788899988763
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.7e-07 Score=100.04 Aligned_cols=201 Identities=9% Similarity=0.059 Sum_probs=134.1
Q ss_pred cEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCC-----------------CCceEEEEEcC-CCCEEEEEeC
Q psy14130 178 RVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCH-----------------PDVINCLSFNR-DGSRLVTTCK 239 (494)
Q Consensus 178 ~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h-----------------~~~v~~l~~~~-~~~~l~s~~~ 239 (494)
....+++++++..++++-...+.|+++|+.++. +.++.+- -.....++|+| ++.++++.+.
T Consensus 625 ~P~GIavd~~gn~LYVaDt~n~~Ir~id~~~~~-V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~ 703 (1057)
T PLN02919 625 RPQGLAYNAKKNLLYVADTENHALREIDFVNET-VRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAG 703 (1057)
T ss_pred CCcEEEEeCCCCEEEEEeCCCceEEEEecCCCE-EEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECC
Confidence 357899999873344444556789999987764 3333210 11346799999 5667777778
Q ss_pred CCeEEEEeCCCCceEEEeeec--------------CCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEe
Q psy14130 240 DKTVRVLDPRTGLVISQGVCH--------------PGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALE 305 (494)
Q Consensus 240 d~~v~iwd~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~ 305 (494)
++.|++||..++... .+.+. .......++++++++.++++. ..++.|++||+.+........
T Consensus 704 ~~~I~v~d~~~g~v~-~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVAD---s~n~~Irv~D~~tg~~~~~~g 779 (1057)
T PLN02919 704 QHQIWEYNISDGVTR-VFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIAD---SESSSIRALDLKTGGSRLLAG 779 (1057)
T ss_pred CCeEEEEECCCCeEE-EEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEE---CCCCeEEEEECCCCcEEEEEe
Confidence 899999999877532 22111 011256789999977788887 688999999987643211100
Q ss_pred ----------eec---------CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEeccccc-----------C
Q psy14130 306 ----------TVD---------SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSL-----------S 355 (494)
Q Consensus 306 ----------~~~---------~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~-----------~ 355 (494)
... .......++++++|.. |++-..++.|++||..++... .....-. .
T Consensus 780 g~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~L-YVADs~N~rIrviD~~tg~v~-tiaG~G~~G~~dG~~~~a~ 857 (1057)
T PLN02919 780 GDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQI-YVADSYNHKIKKLDPATKRVT-TLAGTGKAGFKDGKALKAQ 857 (1057)
T ss_pred cccccCcccccccCCCCchhhhhccCCceeeEeCCCcE-EEEECCCCEEEEEECCCCeEE-EEeccCCcCCCCCcccccc
Confidence 000 0113457889999985 588889999999999877542 2221100 1
Q ss_pred CCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 356 GAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 356 ~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
-....+++++|+|.++++. +..+++|++.+
T Consensus 858 l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~ 889 (1057)
T PLN02919 858 LSEPAGLALGENGRLFVADTNNSLIRYLDLNK 889 (1057)
T ss_pred cCCceEEEEeCCCCEEEEECCCCEEEEEECCC
Confidence 1246899999999988874 78899999987
|
|
| >KOG4190|consensus | Back alignment and domain information |
|---|
Probab=99.08 E-value=4e-10 Score=105.78 Aligned_cols=172 Identities=17% Similarity=0.219 Sum_probs=128.6
Q ss_pred eEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCC-------CeEEEEecCCCCceEEEEEcCCCCEEEEEeCCC
Q psy14130 169 IMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGK-------GEALTVIDCHPDVINCLSFNRDGSRLVTTCKDK 241 (494)
Q Consensus 169 ~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~-------~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~ 241 (494)
+..+.||+..|..++--.+. +-+++++.|.+|++|.++. ..+..+++.|+.+|.++.|-.+-+.++++ |+
T Consensus 728 L~nf~GH~~~iRai~AidNE-NSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~Sc--D~ 804 (1034)
T KOG4190|consen 728 LCNFTGHQEKIRAIAAIDNE-NSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASC--DG 804 (1034)
T ss_pred eecccCcHHHhHHHHhcccc-cceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeec--cC
Confidence 45778999999988766554 7899999999999999863 23667788999999999999998888765 78
Q ss_pred eEEEEeCCCCceEEEeee-cCCCCceEEEEECC-CCeEEEEEecCCCCceEEEEeCCCCCCceeEeee--cC-CCceEEe
Q psy14130 242 TVRVLDPRTGLVISQGVC-HPGTRSSKAVFIGD-TGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV--DS-SSGVLFP 316 (494)
Q Consensus 242 ~v~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~--~~-~~~v~~~ 316 (494)
-|++||+--++++.++.. ........+...++ +..++.+|. +...+|+++|.|........... .. ..-+.++
T Consensus 805 giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgc--saeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~i 882 (1034)
T KOG4190|consen 805 GIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGC--SAESTVKLFDARSCEWTCELKVCNAPGPNALTRAI 882 (1034)
T ss_pred cceeecccccchhHhhhcCcccCCCceeEecccCcchheeeec--cchhhheeeecccccceeeEEeccCCCCchheeEE
Confidence 899999988886664421 11111333444444 355666553 67889999999976654443332 12 2457889
Q ss_pred EEeCCCCEEEEEEeCCCcEEEEEeeCCCce
Q psy14130 317 YYDHDTRILFLAGKGDGNIRYYELTNERPY 346 (494)
Q Consensus 317 ~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~ 346 (494)
+..+.|+.+ +++-..|.|.+.|.++|+.+
T Consensus 883 aVa~~GN~l-Aa~LSnGci~~LDaR~G~vI 911 (1034)
T KOG4190|consen 883 AVADKGNKL-AAALSNGCIAILDARNGKVI 911 (1034)
T ss_pred EeccCcchh-hHHhcCCcEEEEecCCCcee
Confidence 999999999 88889999999999999753
|
|
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=99.08 E-value=5e-07 Score=84.72 Aligned_cols=219 Identities=10% Similarity=0.003 Sum_probs=140.8
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEe---------CCCeEEEEECCCCeEEEEecCC--
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAG---------FDYLIILWDVGKGEALTVIDCH-- 218 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s---------~d~~v~iwd~~~~~~~~~~~~h-- 218 (494)
+|.+.|..+. +.+.++..-..+- .+ ++|++..+.++.+ .+..|.+||+.+.+.+..+..-
T Consensus 28 ~v~ViD~~~~-------~v~g~i~~G~~P~-~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~ 98 (352)
T TIGR02658 28 QVYTIDGEAG-------RVLGMTDGGFLPN-PV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEG 98 (352)
T ss_pred eEEEEECCCC-------EEEEEEEccCCCc-ee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCC
Confidence 6888898887 3334443222222 24 9999965555556 6889999999999998887632
Q ss_pred -----CCceEEEEEcCCCCEEEEEe-C-CCeEEEEeCCCCceEEEeeecCC------------------C----------
Q psy14130 219 -----PDVINCLSFNRDGSRLVTTC-K-DKTVRVLDPRTGLVISQGVCHPG------------------T---------- 263 (494)
Q Consensus 219 -----~~~v~~l~~~~~~~~l~s~~-~-d~~v~iwd~~~~~~~~~~~~~~~------------------~---------- 263 (494)
......++++|||++|+... . +..|-+.|+.+++.+.++.-... .
T Consensus 99 p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~~~~vy~t~e~~~~~~~~Dg~~~~v~~d~~g 178 (352)
T TIGR02658 99 PRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPDCYHIFPTANDTFFMHCRDGSLAKVGYGTKG 178 (352)
T ss_pred chhhccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCCCcEEEEecCCccEEEeecCceEEEEecCCC
Confidence 22334789999999988766 3 78999999998876665431110 0
Q ss_pred --CceE--E------------EEECCCCeEEEEEecCCCCceEEEEeCCCCCC----ceeEeeec------CCCceEEeE
Q psy14130 264 --RSSK--A------------VFIGDTGRIVTTGFSRHSDRQVGLWDENDLNT----PLALETVD------SSSGVLFPY 317 (494)
Q Consensus 264 --~~~~--~------------~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~----~~~~~~~~------~~~~v~~~~ 317 (494)
.... + .+.+.++..+.+. .+|+|.+.|+..... +....... ...++.-++
T Consensus 179 ~~~~~~~~vf~~~~~~v~~rP~~~~~dg~~~~vs----~eG~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia 254 (352)
T TIGR02658 179 NPKIKPTEVFHPEDEYLINHPAYSNKSGRLVWPT----YTGKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVA 254 (352)
T ss_pred ceEEeeeeeecCCccccccCCceEcCCCcEEEEe----cCCeEEEEecCCCcceecceeeeccccccccccCCCcceeEE
Confidence 0000 0 1223134555555 249999999654221 11111111 123344589
Q ss_pred EeCCCCEEEEEEe---------CCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCc-eeeec---cceeEEEEee
Q psy14130 318 YDHDTRILFLAGK---------GDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRG-CDVTQ---CEIFRFFKLH 384 (494)
Q Consensus 318 ~~~~~~~l~~~g~---------~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~-~~~~~---~~~~~~~~l~ 384 (494)
++|+++.+|+... ..+.|.++|..+++.+.++. .+..+.+++++||+. .+... ++.+.++++.
T Consensus 255 ~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~----vG~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~ 330 (352)
T TIGR02658 255 YHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIE----LGHEIDSINVSQDAKPLLYALSTGDKTLYIFDAE 330 (352)
T ss_pred EcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEe----CCCceeeEEECCCCCeEEEEeCCCCCcEEEEECc
Confidence 9999999988542 22579999999988654433 356799999999998 55542 5778999987
Q ss_pred C
Q psy14130 385 T 385 (494)
Q Consensus 385 ~ 385 (494)
+
T Consensus 331 t 331 (352)
T TIGR02658 331 T 331 (352)
T ss_pred C
Confidence 7
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >PF08953 DUF1899: Domain of unknown function (DUF1899); InterPro: IPR015048 This set of proteins are found in various eukaryotic proteins | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.8e-10 Score=77.91 Aligned_cols=62 Identities=56% Similarity=0.977 Sum_probs=38.6
Q ss_pred cccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCc
Q psy14130 89 GVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHR 150 (494)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 150 (494)
+++++||||+++.+.+++.+|++++++...+|.++|+.|++++|+.+...+||.++|.+.++
T Consensus 2 ~vR~SKfRhv~g~~~kke~~y~~i~vs~~~~d~n~i~~N~kfiA~~~~~~GGG~~~Vlpl~~ 63 (65)
T PF08953_consen 2 FVRSSKFRHVFGKPAKKEECYDNIRVSTSSWDSNFIAANPKFIAVPWESGGGGAFAVLPLNK 63 (65)
T ss_dssp -----TTTT-EEEE--GGGSEES--B-----SS-CEEE-SSEEEEEB--SSS--EEEEETT-
T ss_pred cccccccccccCccCCccccCcCEEEeCccccCCeEEEcCCEEEEEeccCCccEEEEEeCCC
Confidence 57899999999999999999999999999999999999999999999999999999988765
|
The function is unknown. ; PDB: 2B4E_A 2AQ5_A. |
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=99.01 E-value=8.9e-07 Score=94.27 Aligned_cols=220 Identities=15% Similarity=0.177 Sum_probs=133.3
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeC---CCeEEEEECCCCeEEEEe----cCCCCce
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGF---DYLIILWDVGKGEALTVI----DCHPDVI 222 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~---d~~v~iwd~~~~~~~~~~----~~h~~~v 222 (494)
.++||+-+ |.+... .+++. +--.+++|.|.| +++|+... ...|.+|.- +|-.-..| ......|
T Consensus 238 ~iRVy~Re-G~L~st-SE~v~------gLe~~l~WrPsG-~lIA~~q~~~~~~~VvFfEr-NGLrhgeF~l~~~~~~~~v 307 (928)
T PF04762_consen 238 VIRVYSRE-GELQST-SEPVD------GLEGALSWRPSG-NLIASSQRLPDRHDVVFFER-NGLRHGEFTLRFDPEEEKV 307 (928)
T ss_pred EEEEECCC-ceEEec-cccCC------CccCCccCCCCC-CEEEEEEEcCCCcEEEEEec-CCcEeeeEecCCCCCCcee
Confidence 69999965 422111 12221 122478999999 78888865 456777774 33322222 2456789
Q ss_pred EEEEEcCCCCEEEEEeCCCeEEEEeCCCCc--eEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeC-----
Q psy14130 223 NCLSFNRDGSRLVTTCKDKTVRVLDPRTGL--VISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDE----- 295 (494)
Q Consensus 223 ~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~----- 295 (494)
..+.|++|+..||....|. |.+|-..+.. +.+++..........+.|+|....-+... ..++.+..++.
T Consensus 308 ~~l~Wn~ds~iLAv~~~~~-vqLWt~~NYHWYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~---t~~g~~~~~~~~~~v~ 383 (928)
T PF04762_consen 308 IELAWNSDSEILAVWLEDR-VQLWTRSNYHWYLKQEIRFSSSESVNFVKWDPEKPLRLHVL---TSNGQYEIYDFAWDVS 383 (928)
T ss_pred eEEEECCCCCEEEEEecCC-ceEEEeeCCEEEEEEEEEccCCCCCCceEECCCCCCEEEEE---ecCCcEEEEEEEEEEE
Confidence 9999999999999988765 9999988776 45555544444345588888655544444 23344443331
Q ss_pred --------------------------CCC--CCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCce-
Q psy14130 296 --------------------------NDL--NTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPY- 346 (494)
Q Consensus 296 --------------------------~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~- 346 (494)
+.. -.|+....+.....|..++|++++..+ ++-..||.|.+|........
T Consensus 384 ~s~~~~~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~l~~~~~v~~vaf~~~~~~~-avl~~d~~l~~~~~~~~~~~~ 462 (928)
T PF04762_consen 384 RSPGSSPNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYELELPSPVNDVAFSPSNSRF-AVLTSDGSLSIYEWDLKNMWS 462 (928)
T ss_pred ecCCCCccCceEEEEEeCCeEEEecccccCCCchHhceEEcCCCCcEEEEEeCCCCeE-EEEECCCCEEEEEecCCCccc
Confidence 110 012222344455678999999998876 77778999999996543211
Q ss_pred ---EEeccc-----------ccCCCCeeEEEEecCCceeeec-c----ceeEEEEee
Q psy14130 347 ---IHFLNQ-----------SLSGAPQRGLGFMPKRGCDVTQ-C----EIFRFFKLH 384 (494)
Q Consensus 347 ---~~~~~~-----------~~~~~~v~~~~~~p~~~~~~~~-~----~~~~~~~l~ 384 (494)
...... ......++.++|..+..+++.. . ..+.++++.
T Consensus 463 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 519 (928)
T PF04762_consen 463 VKPPKLLSSISLDSMDISDSELPLGSLRQLAWLNDDTLLVLSDSDSNQSKIVLVDID 519 (928)
T ss_pred ccCcchhhhcccccccccccccccccEEEEEEeCCCEEEEEEecCcccceEEEEEec
Confidence 000000 1123567888998877655543 2 355666653
|
|
| >KOG4497|consensus | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.7e-08 Score=89.21 Aligned_cols=165 Identities=19% Similarity=0.256 Sum_probs=118.7
Q ss_pred cccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEE-EEeCCCeEEEEeCCCCceE
Q psy14130 176 KRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLV-TTCKDKTVRVLDPRTGLVI 254 (494)
Q Consensus 176 ~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~-s~~~d~~v~iwd~~~~~~~ 254 (494)
-..|..+.|..+...+|.....|+.|.+|++...+-...++....++.+++|+|||+.|+ +..-|-+|.+|.+.+.+..
T Consensus 48 ldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~ 127 (447)
T KOG4497|consen 48 LDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGY 127 (447)
T ss_pred HHHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeE
Confidence 356788999998877788888999999999998888888888889999999999997555 5557999999999987744
Q ss_pred EEeeecCCCCceEEEEECCCCeEEEEEec---------------------------------CCCCceEEEEeCCCCCCc
Q psy14130 255 SQGVCHPGTRSSKAVFIGDTGRIVTTGFS---------------------------------RHSDRQVGLWDENDLNTP 301 (494)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~~---------------------------------~~~d~~i~iwd~~~~~~~ 301 (494)
.. .|....+..++|+++ +++.+..-- .-++..+.+||---.
T Consensus 128 ~~--~~pK~~~kg~~f~~d-g~f~ai~sRrDCkdyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Le--- 201 (447)
T KOG4497|consen 128 LL--PHPKTNVKGYAFHPD-GQFCAILSRRDCKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLE--- 201 (447)
T ss_pred Ee--cccccCceeEEECCC-CceeeeeecccHHHHHHHHhhHHHHHHHhcCCCcccccCceECCCCcEEEEecchhh---
Confidence 32 233333677888888 444443300 012344566662211
Q ss_pred eeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceE
Q psy14130 302 LALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYI 347 (494)
Q Consensus 302 ~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~ 347 (494)
..+......-++..+.|+|.+++| +.|+.|+.+|+.+--+.+++.
T Consensus 202 ykv~aYe~~lG~k~v~wsP~~qfl-avGsyD~~lrvlnh~tWk~f~ 246 (447)
T KOG4497|consen 202 YKVYAYERGLGLKFVEWSPCNQFL-AVGSYDQMLRVLNHFTWKPFG 246 (447)
T ss_pred heeeeeeeccceeEEEeccccceE-Eeeccchhhhhhceeeeeehh
Confidence 111123344688999999999999 999999999998776665543
|
|
| >KOG0309|consensus | Back alignment and domain information |
|---|
Probab=98.97 E-value=5.7e-09 Score=101.50 Aligned_cols=223 Identities=16% Similarity=0.238 Sum_probs=147.3
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC-eEEEEecCCCCceEEEEEc
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKG-EALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~-~~~~~~~~h~~~v~~l~~~ 228 (494)
+-.+|++...... .....+.||...|+.+.|+|....+|++++.|..+..||++.. .++..+..-...-..++|+
T Consensus 92 kaiiwnlA~ss~~----aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwn 167 (1081)
T KOG0309|consen 92 KAIIWNLAKSSSN----AIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWN 167 (1081)
T ss_pred hhhhhhhhcCCcc----ceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeec
Confidence 4678888765331 3345678999999999999998889999999999999999875 4566666666677889999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCc-eEEEeeecCCCCceEEEEECCCC-eEEEEEecCCCCceEEEEeCCCCCCceeEee
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGL-VISQGVCHPGTRSSKAVFIGDTG-RIVTTGFSRHSDRQVGLWDENDLNTPLALET 306 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~ 306 (494)
.....+...+..+.|++||.+.|. ++..+++|... +..+.|..--. .++.+ +.|++|+.||..+..... -..
T Consensus 168 yk~p~vlasshg~~i~vwd~r~gs~pl~s~K~~vs~-vn~~~fnr~~~s~~~s~----~~d~tvkfw~y~kSt~e~-~~~ 241 (1081)
T KOG0309|consen 168 YKDPNVLASSHGNDIFVWDLRKGSTPLCSLKGHVSS-VNSIDFNRFKYSEIMSS----SNDGTVKFWDYSKSTTES-KRT 241 (1081)
T ss_pred ccCcchhhhccCCceEEEeccCCCcceEEeccccee-eehHHHhhhhhhhhccc----CCCCceeeeccccccccc-cee
Confidence 966666667778899999999886 77888887766 77777765433 44444 489999999987532211 122
Q ss_pred ecCCCceEEeEEeCCCCEEEEE-EeCCCcEEEEEeeCCC----------ceEEecccccCCCCeeEEEEecCCc------
Q psy14130 307 VDSSSGVLFPYYDHDTRILFLA-GKGDGNIRYYELTNER----------PYIHFLNQSLSGAPQRGLGFMPKRG------ 369 (494)
Q Consensus 307 ~~~~~~v~~~~~~~~~~~l~~~-g~~dg~i~~wd~~~~~----------~~~~~~~~~~~~~~v~~~~~~p~~~------ 369 (494)
......+....|-|-|+-.++- --++..+.+++.++.. ++..+. + |...|..+-|-..+.
T Consensus 242 vtt~~piw~~r~~Pfg~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~-G--H~D~V~eFlWR~r~e~~~d~d 318 (1081)
T KOG0309|consen 242 VTTNFPIWRGRYLPFGEGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFV-G--HDDVVLEFLWRKRKECDGDYD 318 (1081)
T ss_pred ccccCcceeccccccCceeEeccccCCeeeeeccccchhhhhccccCCcceeeec-C--cchHHHHHhhhhcccccCCCC
Confidence 2344567777787866544222 2233345555544322 211121 1 233444444433222
Q ss_pred ----eeee--ccceeEEEEeeC
Q psy14130 370 ----CDVT--QCEIFRFFKLHT 385 (494)
Q Consensus 370 ----~~~~--~~~~~~~~~l~~ 385 (494)
.+++ .|..+|+|.+..
T Consensus 319 ~rdfQLVTWSkD~~lrlWpI~~ 340 (1081)
T KOG0309|consen 319 SRDFQLVTWSKDQTLRLWPIDS 340 (1081)
T ss_pred ccceeEEEeecCCceEeeeccH
Confidence 2333 589999999865
|
|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.1e-06 Score=85.86 Aligned_cols=194 Identities=12% Similarity=0.114 Sum_probs=122.4
Q ss_pred cEEEEEEcCCCCCEEEEEeC---CCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEE-eC--CCeEEEEeCCCC
Q psy14130 178 RVGYIEWHPTAENVVASAGF---DYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTT-CK--DKTVRVLDPRTG 251 (494)
Q Consensus 178 ~V~~~~~~p~~~~~l~s~s~---d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~~--d~~v~iwd~~~~ 251 (494)
.+....|+|+|..+++..+. +..|.++|+.+++...... ..+......|+|||+.|+.. +. +..|.++|+.++
T Consensus 189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~-~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g 267 (419)
T PRK04043 189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIAS-SQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTK 267 (419)
T ss_pred CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEec-CCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCC
Confidence 67889999999544554333 3579999998887554433 55666778899999877644 33 356888898877
Q ss_pred ceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeC
Q psy14130 252 LVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKG 331 (494)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~ 331 (494)
+. ..+..+... .....|+|++.+++.+. ++.....|.+.|+.++....... ... ....|+|||+.|+.+...
T Consensus 268 ~~-~~LT~~~~~-d~~p~~SPDG~~I~F~S-dr~g~~~Iy~~dl~~g~~~rlt~--~g~---~~~~~SPDG~~Ia~~~~~ 339 (419)
T PRK04043 268 TL-TQITNYPGI-DVNGNFVEDDKRIVFVS-DRLGYPNIFMKKLNSGSVEQVVF--HGK---NNSSVSTYKNYIVYSSRE 339 (419)
T ss_pred cE-EEcccCCCc-cCccEECCCCCEEEEEE-CCCCCceEEEEECCCCCeEeCcc--CCC---cCceECCCCCEEEEEEcC
Confidence 63 344434332 34567999988888876 11122368888887654311111 111 124899999999666544
Q ss_pred C--------CcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec---cceeEEEEeeC
Q psy14130 332 D--------GNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ---CEIFRFFKLHT 385 (494)
Q Consensus 332 d--------g~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~---~~~~~~~~l~~ 385 (494)
. ..|.+.|+.++.. +.+... .......|+|||..++.. .+...++.+..
T Consensus 340 ~~~~~~~~~~~I~v~d~~~g~~--~~LT~~---~~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l 399 (419)
T PRK04043 340 TNNEFGKNTFNLYLISTNSDYI--RRLTAN---GVNQFPRFSSDGGSIMFIKYLGNQSALGIIRL 399 (419)
T ss_pred CCcccCCCCcEEEEEECCCCCe--EECCCC---CCcCCeEECCCCCEEEEEEccCCcEEEEEEec
Confidence 3 3678888887763 333321 223458899999866542 34444555544
|
|
| >KOG1064|consensus | Back alignment and domain information |
|---|
Probab=98.95 E-value=4.6e-09 Score=111.28 Aligned_cols=148 Identities=21% Similarity=0.342 Sum_probs=114.2
Q ss_pred ccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEe---CCCeEEEEeCCCCc-
Q psy14130 177 RRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTC---KDKTVRVLDPRTGL- 252 (494)
Q Consensus 177 ~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~---~d~~v~iwd~~~~~- 252 (494)
..|+.+.|+.+| +.+..+..||.+.+|.+. .++....+.|........|-. ..+++++ .++.+.+||.--..
T Consensus 2252 s~vtr~~f~~qG-nk~~i~d~dg~l~l~q~~-pk~~~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~ 2327 (2439)
T KOG1064|consen 2252 SRVTRSRFNHQG-NKFGIVDGDGDLSLWQAS-PKPYTSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPM 2327 (2439)
T ss_pred chhhhhhhcccC-CceeeeccCCceeecccC-CcceeccccCCccccceeeee--hhhhccccCCCCCcccchhcccCcc
Confidence 778999999999 688888889999999986 677888889999999999975 6777765 47899999965332
Q ss_pred --eEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEe
Q psy14130 253 --VISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGK 330 (494)
Q Consensus 253 --~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~ 330 (494)
++. .+|.+. .+.+++.|. ..++.+| +.+|.|++||++........ .. ++ .+..|++|+
T Consensus 2328 ~s~v~--~~H~~g-aT~l~~~P~-~qllisg---gr~G~v~l~D~rqrql~h~~-------~~----~~--~~~~f~~~s 2387 (2439)
T KOG1064|consen 2328 NSLVH--TCHDGG-ATVLAYAPK-HQLLISG---GRKGEVCLFDIRQRQLRHTF-------QA----LD--TREYFVTGS 2387 (2439)
T ss_pred cceee--eecCCC-ceEEEEcCc-ceEEEec---CCcCcEEEeehHHHHHHHHh-------hh----hh--hhheeeccC
Confidence 444 788888 899999998 5666666 69999999999863321111 11 33 444459999
Q ss_pred CCCcEEEEEeeCCCceEE
Q psy14130 331 GDGNIRYYELTNERPYIH 348 (494)
Q Consensus 331 ~dg~i~~wd~~~~~~~~~ 348 (494)
..|.|+||++..-..+.+
T Consensus 2388 s~g~ikIw~~s~~~ll~~ 2405 (2439)
T KOG1064|consen 2388 SEGNIKIWRLSEFGLLHT 2405 (2439)
T ss_pred cccceEEEEccccchhhc
Confidence 999999999988654333
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=98.93 E-value=8.7e-07 Score=82.45 Aligned_cols=172 Identities=18% Similarity=0.168 Sum_probs=121.5
Q ss_pred cCCcEEEEEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCC-eEEEEECCCCeEEEEec
Q psy14130 138 AGGGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDY-LIILWDVGKGEALTVID 216 (494)
Q Consensus 138 ~~~g~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~-~v~iwd~~~~~~~~~~~ 216 (494)
..|..++..+-++..|.+...+- . .-.+|...|.-..+.-+++ -++.|..|| .+-|+|..+++. ..+.
T Consensus 330 ~~Gd~ia~VSRGkaFi~~~~~~~-------~--iqv~~~~~VrY~r~~~~~e-~~vigt~dgD~l~iyd~~~~e~-kr~e 398 (668)
T COG4946 330 VNGDYIALVSRGKAFIMRPWDGY-------S--IQVGKKGGVRYRRIQVDPE-GDVIGTNDGDKLGIYDKDGGEV-KRIE 398 (668)
T ss_pred CCCcEEEEEecCcEEEECCCCCe-------e--EEcCCCCceEEEEEccCCc-ceEEeccCCceEEEEecCCceE-EEee
Confidence 34556666667777777765541 1 2235888899999988874 788999999 899999987764 4555
Q ss_pred CCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCC-CCceEEEEeC
Q psy14130 217 CHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRH-SDRQVGLWDE 295 (494)
Q Consensus 217 ~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~-~d~~i~iwd~ 295 (494)
..-+.|.++..+++|++++.+-....+.+.|+.+|.....-+...+- +....|+|+ ++.++-+|..+ --..|+++|+
T Consensus 399 ~~lg~I~av~vs~dGK~~vvaNdr~el~vididngnv~~idkS~~~l-Itdf~~~~n-sr~iAYafP~gy~tq~Iklydm 476 (668)
T COG4946 399 KDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRLIDKSEYGL-ITDFDWHPN-SRWIAYAFPEGYYTQSIKLYDM 476 (668)
T ss_pred CCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeEecccccce-eEEEEEcCC-ceeEEEecCcceeeeeEEEEec
Confidence 57789999999999999999999999999999999855444444444 899999998 77777776322 2357899998
Q ss_pred CCCCCceeEeeecCCCceEEeEEeCCCCEE
Q psy14130 296 NDLNTPLALETVDSSSGVLFPYYDHDTRIL 325 (494)
Q Consensus 296 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 325 (494)
.+.+.- ... .....-.+++|+||+++|
T Consensus 477 ~~~Kiy-~vT--T~ta~DfsPaFD~d~ryL 503 (668)
T COG4946 477 DGGKIY-DVT--TPTAYDFSPAFDPDGRYL 503 (668)
T ss_pred CCCeEE-Eec--CCcccccCcccCCCCcEE
Confidence 764321 111 111223345666666665
|
|
| >KOG2314|consensus | Back alignment and domain information |
|---|
Probab=98.91 E-value=8e-07 Score=84.24 Aligned_cols=319 Identities=12% Similarity=0.167 Sum_probs=177.3
Q ss_pred eeEEECCCCCeeEEeecCCCcEEEEeeeecccc-cc--cccC-cccccccccceeecCCceEEEEEEEecCceEEEEecc
Q psy14130 10 LDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRD-GC--YDNV-PITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIH 85 (494)
Q Consensus 10 ~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~-~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~ 85 (494)
+-+.||| .|.||+|--.-|.. +|.-..-.. .. +... -+..+++...++..++.-...-+....|..+.++.+.
T Consensus 214 tyv~wSP-~GTYL~t~Hk~GI~--lWGG~~f~r~~RF~Hp~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~ 290 (698)
T KOG2314|consen 214 TYVRWSP-KGTYLVTFHKQGIA--LWGGESFDRIQRFYHPGVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIA 290 (698)
T ss_pred eeEEecC-CceEEEEEecccee--eecCccHHHHHhccCCCceeeecCCccceEEEecCCccccCcccCCCceEEEEEcc
Confidence 5689999 89999999988866 565322111 11 1111 1234444444444433333222222333344443332
Q ss_pred ccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCCCCc
Q psy14130 86 RFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLSGNL 165 (494)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~~~~ 165 (494)
.. .....|.. ++-....|...--.++.++.|.... +.|.||+.+.-.+...
T Consensus 291 tG------~lkrsF~~----------~~~~~~~WP~frWS~DdKy~Arm~~------------~sisIyEtpsf~lld~- 341 (698)
T KOG2314|consen 291 TG------LLKRSFPV----------IKSPYLKWPIFRWSHDDKYFARMTG------------NSISIYETPSFMLLDK- 341 (698)
T ss_pred cc------chhcceec----------cCCCccccceEEeccCCceeEEecc------------ceEEEEecCceeeecc-
Confidence 21 11111110 0111112332223334455444332 4688888776432110
Q ss_pred ccceEecccccccEEEEEEcCCCCCEEEEEeCC-----CeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEe--
Q psy14130 166 NEWIMDLHGHKRRVGYIEWHPTAENVVASAGFD-----YLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTC-- 238 (494)
Q Consensus 166 ~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d-----~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~-- 238 (494)
..+ .-..|....|+|.+ ++||--+.. ..+.+-.+-+++.+++-.-|.-.=..+.|-.+|.+|+.--
T Consensus 342 ----Ksl--ki~gIr~FswsP~~-~llAYwtpe~~~~parvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdyLcvkvdR 414 (698)
T KOG2314|consen 342 ----KSL--KISGIRDFSWSPTS-NLLAYWTPETNNIPARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDYLCVKVDR 414 (698)
T ss_pred ----ccc--CCccccCcccCCCc-ceEEEEcccccCCcceEEEEecCccceeeeccceeeeccEEEeccCCcEEEEEEEe
Confidence 111 33567888999997 687765432 2456666666666665554443334567777888887422
Q ss_pred --------CCCeEEEEeCCCCc-eEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCC-CCCCceeEeeec
Q psy14130 239 --------KDKTVRVLDPRTGL-VISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEN-DLNTPLALETVD 308 (494)
Q Consensus 239 --------~d~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~-~~~~~~~~~~~~ 308 (494)
.-..+.|+.++... ++..+... .. +...+|-|.++++.+.. ......++.+|.++ +...+..+..++
T Consensus 415 ~tK~~~~g~f~n~eIfrireKdIpve~velk-e~-vi~FaWEP~gdkF~vi~-g~~~k~tvsfY~~e~~~~~~~lVk~~d 491 (698)
T KOG2314|consen 415 HTKSKVKGQFSNLEIFRIREKDIPVEVVELK-ES-VIAFAWEPHGDKFAVIS-GNTVKNTVSFYAVETNIKKPSLVKELD 491 (698)
T ss_pred eccccccceEeeEEEEEeeccCCCceeeecc-hh-eeeeeeccCCCeEEEEE-ccccccceeEEEeecCCCchhhhhhhc
Confidence 12246677777655 33333322 22 78889999987766654 11335679999988 444444454454
Q ss_pred CCCceEEeEEeCCCCEEEEEE--eCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec
Q psy14130 309 SSSGVLFPYYDHDTRILFLAG--KGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ 374 (494)
Q Consensus 309 ~~~~v~~~~~~~~~~~l~~~g--~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~ 374 (494)
. ...+.+.|+|.|+++++++ |..|.+.++|+........-... ....+.+.|.|.|.++++.
T Consensus 492 k-~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~a~~k~~~~~e---h~~at~veWDPtGRYvvT~ 555 (698)
T KOG2314|consen 492 K-KFANTVFWSPKGRFVVVAALVSRRGDLEFYDTDYADLKDTASPE---HFAATEVEWDPTGRYVVTS 555 (698)
T ss_pred c-cccceEEEcCCCcEEEEEEecccccceEEEecchhhhhhccCcc---ccccccceECCCCCEEEEe
Confidence 4 5677899999999996654 34889999999853321111111 2346778999999999885
|
|
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.88 E-value=2.1e-06 Score=80.67 Aligned_cols=179 Identities=13% Similarity=0.167 Sum_probs=116.9
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeC----------CCeEEEEECCCCeEEEEecCCC
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGF----------DYLIILWDVGKGEALTVIDCHP 219 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~----------d~~v~iwd~~~~~~~~~~~~h~ 219 (494)
.++||.++.+..+ ..++|. .-.=..+.|++.|..+|+-.-. ..++.|++++... +.....-.
T Consensus 203 ~~~i~sIp~~s~l-----~tk~lf--k~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~-i~V~~~~~ 274 (561)
T COG5354 203 MVRILSIPKNSVL-----VTKNLF--KVSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERS-IPVEKDLK 274 (561)
T ss_pred EEEEEEccCCCee-----eeeeeE--eecccEEEEecCCceEEEEEEEeeecccceeccceEEEEeecccc-cceecccc
Confidence 4889988865321 112221 1222468899998544333211 2467888886433 33333567
Q ss_pred CceEEEEEcCCCCEEEEEe--CCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCC
Q psy14130 220 DVINCLSFNRDGSRLVTTC--KDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEND 297 (494)
Q Consensus 220 ~~v~~l~~~~~~~~l~s~~--~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~ 297 (494)
++|...+|.|.++.+++.+ .+-.+-++|++.. ++..+. .+. -..+.|+|....++.+||.+ ..|.|-+||...
T Consensus 275 ~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N-l~~~~P--e~~-rNT~~fsp~~r~il~agF~n-l~gni~i~~~~~ 349 (561)
T COG5354 275 DPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN-LRFYFP--EQK-RNTIFFSPHERYILFAGFDN-LQGNIEIFDPAG 349 (561)
T ss_pred ccceeeeecccCCceeEEecccccceeecccccc-eEEecC--Ccc-cccccccCcccEEEEecCCc-cccceEEeccCC
Confidence 9999999999988877665 6888999999865 443332 333 47788999988999998743 357899999765
Q ss_pred CCCceeEeeecCCCceEEeEEeCCCCEEEEEEe-----CCCcEEEEEeeCCC
Q psy14130 298 LNTPLALETVDSSSGVLFPYYDHDTRILFLAGK-----GDGNIRYYELTNER 344 (494)
Q Consensus 298 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~-----~dg~i~~wd~~~~~ 344 (494)
... ....... ....-+.|+||++++..... .|..|.+||+....
T Consensus 350 rf~--~~~~~~~-~n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g~~ 398 (561)
T COG5354 350 RFK--VAGAFNG-LNTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYGAK 398 (561)
T ss_pred ceE--EEEEeec-CCceEeeccCCceEEEecCCCcccccCcceEEEEecCch
Confidence 322 1212222 34555789999999855432 47889999997654
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.86 E-value=6.6e-06 Score=89.47 Aligned_cols=159 Identities=18% Similarity=0.215 Sum_probs=107.9
Q ss_pred EEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCC---------------CCceEEEEEcCCCCEE-EEEeCCCeE
Q psy14130 180 GYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCH---------------PDVINCLSFNRDGSRL-VTTCKDKTV 243 (494)
Q Consensus 180 ~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h---------------~~~v~~l~~~~~~~~l-~s~~~d~~v 243 (494)
..++++|++..++++.+.++.|++||..++... .+.+. -.....|+++|+|..| ++-+.+++|
T Consensus 686 ~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~-~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~I 764 (1057)
T PLN02919 686 WDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTR-VFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSI 764 (1057)
T ss_pred eEEEEecCCCeEEEEECCCCeEEEEECCCCeEE-EEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeE
Confidence 579999955478888888999999999876542 22111 1245679999999844 455567999
Q ss_pred EEEeCCCCceEEEeee-------------cCC-------CCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCcee
Q psy14130 244 RVLDPRTGLVISQGVC-------------HPG-------TRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLA 303 (494)
Q Consensus 244 ~iwd~~~~~~~~~~~~-------------~~~-------~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~ 303 (494)
++||+.++.......+ ..+ .....+++.++ +.++++. ..++.|++||..+... ..
T Consensus 765 rv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~d-G~LYVAD---s~N~rIrviD~~tg~v-~t 839 (1057)
T PLN02919 765 RALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKD-GQIYVAD---SYNHKIKKLDPATKRV-TT 839 (1057)
T ss_pred EEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCC-CcEEEEE---CCCCEEEEEECCCCeE-EE
Confidence 9999987763211100 000 11457788887 4577777 6899999999876432 11
Q ss_pred Eeeec------------CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCc
Q psy14130 304 LETVD------------SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERP 345 (494)
Q Consensus 304 ~~~~~------------~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~ 345 (494)
+.... .-.....++++++|+. |++-+.++.|++||+.+++.
T Consensus 840 iaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~l-yVaDt~Nn~Irvid~~~~~~ 892 (1057)
T PLN02919 840 LAGTGKAGFKDGKALKAQLSEPAGLALGENGRL-FVADTNNSLIRYLDLNKGEA 892 (1057)
T ss_pred EeccCCcCCCCCcccccccCCceEEEEeCCCCE-EEEECCCCEEEEEECCCCcc
Confidence 11110 1124667899999985 48888999999999998764
|
|
| >KOG4532|consensus | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.2e-06 Score=75.70 Aligned_cols=210 Identities=10% Similarity=0.008 Sum_probs=132.4
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+...+|...+... .......|...|+-+.=.-+...-+..++.|.++++.++..+.....+....-.+.+++++
T Consensus 94 g~fd~~~~~tn~~------h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~~~~~h~~~~~~ns~~~s 167 (344)
T KOG4532|consen 94 GQFDLFACNTNDG------HLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSNKFAVHNQNLTQNSLHYS 167 (344)
T ss_pred ceeeeecccCccc------ceeeecccccchhhhhhhcccccceeeccCCcceeEEEEecCcccceeeccccceeeeEEc
Confidence 3688898876531 1122222333332222111222346778889999999987554332222111238899999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCc--eEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEee
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGL--VISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALET 306 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~ 306 (494)
+|++++++.+....|-.|.+.... .+....+.....-....|+.. ...+|++ ..||++.|||+|....|.....
T Consensus 168 nd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~-~~~FAv~---~Qdg~~~I~DVR~~~tpm~~~s 243 (344)
T KOG4532|consen 168 NDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSEN-DLQFAVV---FQDGTCAIYDVRNMATPMAEIS 243 (344)
T ss_pred CCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccC-cceEEEE---ecCCcEEEEEecccccchhhhc
Confidence 999999999999999999886543 333233333222466677776 6788888 5999999999998776654432
Q ss_pred ---ecCCCceEEeEEeCCCC--EEEEEEeCCCcEEEEEeeCCCceEEeccc----ccCC-CCeeEEEEecCCc
Q psy14130 307 ---VDSSSGVLFPYYDHDTR--ILFLAGKGDGNIRYYELTNERPYIHFLNQ----SLSG-APQRGLGFMPKRG 369 (494)
Q Consensus 307 ---~~~~~~v~~~~~~~~~~--~l~~~g~~dg~i~~wd~~~~~~~~~~~~~----~~~~-~~v~~~~~~p~~~ 369 (494)
-.|.+.++.+.|++.|. +|+. .-.=+.+.+-|+++.+..+..+.. ..+. ..+.+-+|+.++.
T Consensus 244 strp~hnGa~R~c~Fsl~g~lDLLf~-sEhfs~~hv~D~R~~~~~q~I~i~~d~~~~~~tq~ifgt~f~~~n~ 315 (344)
T KOG4532|consen 244 STRPHHNGAFRVCRFSLYGLLDLLFI-SEHFSRVHVVDTRNYVNHQVIVIPDDVERKHNTQHIFGTNFNNENE 315 (344)
T ss_pred ccCCCCCCceEEEEecCCCcceEEEE-ecCcceEEEEEcccCceeeEEecCccccccccccccccccccCCCc
Confidence 24567899999998664 3433 345678999999998765444322 1122 2366777776554
|
|
| >COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.1e-07 Score=83.58 Aligned_cols=214 Identities=13% Similarity=0.239 Sum_probs=145.2
Q ss_pred ccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe-----EEEEecCCC------------CceEEEEEcCCCC--EEE
Q psy14130 175 HKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE-----ALTVIDCHP------------DVINCLSFNRDGS--RLV 235 (494)
Q Consensus 175 h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~-----~~~~~~~h~------------~~v~~l~~~~~~~--~l~ 235 (494)
....|+++.|...| .+|++|...|.|.++.-+... -...+++|. +.|..+.|..++. .++
T Consensus 25 ead~ItaVefd~tg-~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFL 103 (460)
T COG5170 25 EADKITAVEFDETG-LYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFL 103 (460)
T ss_pred ccceeeEEEecccc-ceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEE
Confidence 34678999999998 799999988999999865432 233456664 4678888877543 667
Q ss_pred EEeCCCeEEEEeCCCCc---------------------------eEEEe----------------eecCCCCceEEEEEC
Q psy14130 236 TTCKDKTVRVLDPRTGL---------------------------VISQG----------------VCHPGTRSSKAVFIG 272 (494)
Q Consensus 236 s~~~d~~v~iwd~~~~~---------------------------~~~~~----------------~~~~~~~~~~~~~~~ 272 (494)
..+.|++|++|.+.... .+..+ ..|.-. +.++.+..
T Consensus 104 lstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yh-iNSiS~Ns 182 (460)
T COG5170 104 LSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYH-INSISFNS 182 (460)
T ss_pred EecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeE-eeeeeecC
Confidence 77789999999875431 00000 123322 66777777
Q ss_pred CCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCC------CceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCc-
Q psy14130 273 DTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSS------SGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERP- 345 (494)
Q Consensus 273 ~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~------~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~- 345 (494)
+...++++ .|-.|.+|++.-......+..+..+ .-+++..|+|....++.-.+..|.|++-|++....
T Consensus 183 D~et~lSa-----DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alc 257 (460)
T COG5170 183 DKETLLSA-----DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALC 257 (460)
T ss_pred chheeeec-----cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhc
Confidence 75555554 5889999998765554444443322 23678899998887778888999999999984321
Q ss_pred -----eE-Eeccccc------CCCCeeEEEEecCCceeeecc-ceeEEEEeeCCCCeEEEeEE
Q psy14130 346 -----YI-HFLNQSL------SGAPQRGLGFMPKRGCDVTQC-EIFRFFKLHTTRNMCEPISM 395 (494)
Q Consensus 346 -----~~-~~~~~~~------~~~~v~~~~~~p~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~ 395 (494)
+. ..+.... ....|..+.|+|.|.++++.| -++++|+++..++.+..+++
T Consensus 258 dn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdyltvkiwDvnm~k~pikTi~~ 320 (460)
T COG5170 258 DNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDYLTVKIWDVNMAKNPIKTIPM 320 (460)
T ss_pred cCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEeccceEEEEecccccCCceeech
Confidence 00 0111111 124678899999999999875 58999999987766666543
|
|
| >KOG2695|consensus | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.3e-08 Score=90.53 Aligned_cols=165 Identities=13% Similarity=0.187 Sum_probs=114.5
Q ss_pred EEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc-----eEEEeeecCCCCceE
Q psy14130 193 ASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGL-----VISQGVCHPGTRSSK 267 (494)
Q Consensus 193 ~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~-----~~~~~~~~~~~~~~~ 267 (494)
++.+.+..|-+-|+++|- -+.|. ..+.|.++.|...++++..|+..|.|..+|+|.+. +.+. .-|.+. +++
T Consensus 228 fs~G~sqqv~L~nvetg~-~qsf~-sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~r-lyh~Ss-vts 303 (425)
T KOG2695|consen 228 FSVGLSQQVLLTNVETGH-QQSFQ-SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQR-LYHDSS-VTS 303 (425)
T ss_pred ecccccceeEEEEeeccc-ccccc-cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEE-EEcCcc-hhh
Confidence 566677889999998874 33444 56789999999999999999999999999998762 3333 346665 677
Q ss_pred EEEEC-CCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCC---CceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCC
Q psy14130 268 AVFIG-DTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSS---SGVLFPYYDHDTRILFLAGKGDGNIRYYELTNE 343 (494)
Q Consensus 268 ~~~~~-~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~ 343 (494)
+.... ++..|++++ .+|.|++||+|..+....+....++ ....-+...+....+ ++++.|...|||.++.+
T Consensus 304 lq~Lq~s~q~LmaS~----M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I-~s~GdDcytRiWsl~~g 378 (425)
T KOG2695|consen 304 LQILQFSQQKLMASD----MTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSI-FSVGDDCYTRIWSLDSG 378 (425)
T ss_pred hhhhccccceEeecc----CcCceeEeeehhhhcccceeeeecccccccccccccccccceE-EEccCeeEEEEEecccC
Confidence 76655 445666666 8999999999976653333333222 223334556666677 77889999999999999
Q ss_pred CceEEeccccc-CCCCeeEEEEec
Q psy14130 344 RPYIHFLNQSL-SGAPQRGLGFMP 366 (494)
Q Consensus 344 ~~~~~~~~~~~-~~~~v~~~~~~p 366 (494)
..+...-..+. ...-+.+++|..
T Consensus 379 hLl~tipf~~s~~e~d~~sv~~~s 402 (425)
T KOG2695|consen 379 HLLCTIPFPYSASEVDIPSVAFDS 402 (425)
T ss_pred ceeeccCCCCccccccccceehhc
Confidence 86544332222 223566677754
|
|
| >KOG2315|consensus | Back alignment and domain information |
|---|
Probab=98.82 E-value=2.9e-06 Score=80.75 Aligned_cols=211 Identities=14% Similarity=0.201 Sum_probs=136.2
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCC-EEEE-----EeCCCeEEEEECCCCeEE-----EEecCC
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAEN-VVAS-----AGFDYLIILWDVGKGEAL-----TVIDCH 218 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~-~l~s-----~s~d~~v~iwd~~~~~~~-----~~~~~h 218 (494)
.+++|++.... .....+ |...|+.+.++|..+. .+|+ .+.-..|+||.......- ++| .
T Consensus 147 ev~f~~~~~f~------~~~~kl--~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~~~a~ksF--F 216 (566)
T KOG2315|consen 147 EVQFYDLGSFK------TIQHKL--SVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQHQPVANKSF--F 216 (566)
T ss_pred eEEEEecCCcc------ceeeee--eccceeeEEecCCCCCceEEEEccCCCCCCcEEEEeccccccccchhhhccc--c
Confidence 58999987642 222222 6788999999998433 3332 244568999987632211 111 1
Q ss_pred CCceEEEEEcCCCC-EE--EEEeCC---------CeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEE-EEecCC
Q psy14130 219 PDVINCLSFNRDGS-RL--VTTCKD---------KTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVT-TGFSRH 285 (494)
Q Consensus 219 ~~~v~~l~~~~~~~-~l--~s~~~d---------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~ 285 (494)
...=..+.|++-|. +| ++..-| .++++.++...+++-.+. ..++ |..+.|++++..+.+ -||
T Consensus 217 kadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L~-k~GP-Vhdv~W~~s~~EF~VvyGf--- 291 (566)
T KOG2315|consen 217 KADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPLL-KEGP-VHDVTWSPSGREFAVVYGF--- 291 (566)
T ss_pred ccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEecC-CCCC-ceEEEECCCCCEEEEEEec---
Confidence 12223577888666 22 233233 368888888333443333 3455 999999999655443 464
Q ss_pred CCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeC--CCcEEEEEeeCCCceEEecccccCCCCeeEEE
Q psy14130 286 SDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKG--DGNIRYYELTNERPYIHFLNQSLSGAPQRGLG 363 (494)
Q Consensus 286 ~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~--dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~ 363 (494)
.--.+.|||++. .. +..+ ..++-.++.|+|.|++++++|-+ -|.|-+||+.+.+.+..+ .. .-.+-+.
T Consensus 292 MPAkvtifnlr~-~~---v~df-~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~----~a-~~tt~~e 361 (566)
T KOG2315|consen 292 MPAKVTIFNLRG-KP---VFDF-PEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKF----KA-ANTTVFE 361 (566)
T ss_pred ccceEEEEcCCC-CE---eEeC-CCCCccceEECCCCCEEEEeecCCCCCceEEEeccchhhcccc----cc-CCceEEE
Confidence 667899999885 22 1222 34566788999999999888654 488999999996654332 21 2246678
Q ss_pred EecCCceeeec--------cceeEEEEeeC
Q psy14130 364 FMPKRGCDVTQ--------CEIFRFFKLHT 385 (494)
Q Consensus 364 ~~p~~~~~~~~--------~~~~~~~~l~~ 385 (494)
|+|||.+++++ |.-++||..+.
T Consensus 362 W~PdGe~flTATTaPRlrvdNg~KiwhytG 391 (566)
T KOG2315|consen 362 WSPDGEYFLTATTAPRLRVDNGIKIWHYTG 391 (566)
T ss_pred EcCCCcEEEEEeccccEEecCCeEEEEecC
Confidence 99999998873 77899999876
|
|
| >KOG4714|consensus | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.2e-07 Score=81.39 Aligned_cols=99 Identities=17% Similarity=0.147 Sum_probs=75.9
Q ss_pred EEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe-EEEEecCCCCceE
Q psy14130 145 VLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE-ALTVIDCHPDVIN 223 (494)
Q Consensus 145 ~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~-~~~~~~~h~~~v~ 223 (494)
+-..+..++|++...+.. ......+ ..|.+++-+|.-.+++++|+.||.+-+||.+... +...++.|+..|.
T Consensus 155 ~n~~d~~~a~~~~p~~t~---~~~~~~~----~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~ 227 (319)
T KOG4714|consen 155 WNAQDNFYANTLDPIKTL---IPSKKAL----DAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIW 227 (319)
T ss_pred Eeeccceeeecccccccc---ccccccc----ccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhh
Confidence 334456778887654321 1111222 2399999999887899999999999999998774 3445678999999
Q ss_pred EEEEcC-CCCEEEEEeCCCeEEEEeCCC
Q psy14130 224 CLSFNR-DGSRLVTTCKDKTVRVLDPRT 250 (494)
Q Consensus 224 ~l~~~~-~~~~l~s~~~d~~v~iwd~~~ 250 (494)
.+.|+| ++..|++++.||.+..||..+
T Consensus 228 eV~FHpk~p~~Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 228 EVHFHPKNPEHLFTCSEDGSLWHWDAST 255 (319)
T ss_pred heeccCCCchheeEecCCCcEEEEcCCC
Confidence 999999 678999999999999999775
|
|
| >KOG0309|consensus | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.8e-08 Score=98.13 Aligned_cols=135 Identities=17% Similarity=0.242 Sum_probs=92.6
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe--EEEEecCCCCceEEEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE--ALTVIDCHPDVINCLSF 227 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~--~~~~~~~h~~~v~~l~~ 227 (494)
.|.+||...+. .++..+++|...|+.++|+.--...+.+++.|++|+.||..... ..... ....+|.--.+
T Consensus 181 ~i~vwd~r~gs------~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~v-tt~~piw~~r~ 253 (1081)
T KOG0309|consen 181 DIFVWDLRKGS------TPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRTV-TTNFPIWRGRY 253 (1081)
T ss_pred ceEEEeccCCC------cceEEecccceeeehHHHhhhhhhhhcccCCCCceeeecccccccccceec-cccCcceeccc
Confidence 69999999885 78889999999999999987665689999999999999987543 22222 23456666666
Q ss_pred cC--CCCEEEEEeCCCeEEEEeCCC----------CceEEEeeecCCCCceEEEEECCC---------C-eEEEEEecCC
Q psy14130 228 NR--DGSRLVTTCKDKTVRVLDPRT----------GLVISQGVCHPGTRSSKAVFIGDT---------G-RIVTTGFSRH 285 (494)
Q Consensus 228 ~~--~~~~l~s~~~d~~v~iwd~~~----------~~~~~~~~~~~~~~~~~~~~~~~~---------~-~l~~~g~~~~ 285 (494)
.| +|.++.---.+..+.+++.++ .++++.+.+|... +....|-..+ . +|++- +
T Consensus 254 ~Pfg~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~-V~eFlWR~r~e~~~d~d~rdfQLVTW----S 328 (1081)
T KOG0309|consen 254 LPFGEGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDV-VLEFLWRKRKECDGDYDSRDFQLVTW----S 328 (1081)
T ss_pred cccCceeEeccccCCeeeeeccccchhhhhccccCCcceeeecCcchH-HHHHhhhhcccccCCCCccceeEEEe----e
Confidence 66 333333332333555554432 2478999999876 5555554321 1 34444 4
Q ss_pred CCceEEEEeCC
Q psy14130 286 SDRQVGLWDEN 296 (494)
Q Consensus 286 ~d~~i~iwd~~ 296 (494)
.|..+++|-+.
T Consensus 329 kD~~lrlWpI~ 339 (1081)
T KOG0309|consen 329 KDQTLRLWPID 339 (1081)
T ss_pred cCCceEeeecc
Confidence 89999999765
|
|
| >KOG2695|consensus | Back alignment and domain information |
|---|
Probab=98.79 E-value=3e-08 Score=88.32 Aligned_cols=135 Identities=16% Similarity=0.181 Sum_probs=104.6
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC-----eEEEEecCCCCceEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKG-----EALTVIDCHPDVINC 224 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~-----~~~~~~~~h~~~v~~ 224 (494)
+|-|-|+.++-. +.+. ..+.|.++.|...+ +++..|...|.|...|++.+ .+.+.+- |...|++
T Consensus 235 qv~L~nvetg~~--------qsf~-sksDVfAlQf~~s~-nLv~~GcRngeI~~iDLR~rnqG~~~~a~rly-h~Ssvts 303 (425)
T KOG2695|consen 235 QVLLTNVETGHQ--------QSFQ-SKSDVFALQFAGSD-NLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLY-HDSSVTS 303 (425)
T ss_pred eeEEEEeecccc--------cccc-cchhHHHHHhcccC-CeeEecccCCcEEEEEeeecccCCCcceEEEE-cCcchhh
Confidence 578888887621 2333 56778999999987 79999999999999999865 3555555 9999999
Q ss_pred EEEcC-CCCEEEEEeCCCeEEEEeCCCCce---EEEeeecCCCCceEE--EEECCCCeEEEEEecCCCCceEEEEeCCCC
Q psy14130 225 LSFNR-DGSRLVTTCKDKTVRVLDPRTGLV---ISQGVCHPGTRSSKA--VFIGDTGRIVTTGFSRHSDRQVGLWDENDL 298 (494)
Q Consensus 225 l~~~~-~~~~l~s~~~d~~v~iwd~~~~~~---~~~~~~~~~~~~~~~--~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~ 298 (494)
+.... ++.+|++.+.+|+|++||+|.-++ +.++.+|-.. ...+ -..+..+.++++| .|...|||.++.+
T Consensus 304 lq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~-~a~l~~~v~~eeg~I~s~G----dDcytRiWsl~~g 378 (425)
T KOG2695|consen 304 LQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNL-SAYLPAHVKEEEGSIFSVG----DDCYTRIWSLDSG 378 (425)
T ss_pred hhhhccccceEeeccCcCceeEeeehhhhcccceeeeeccccc-ccccccccccccceEEEcc----CeeEEEEEecccC
Confidence 98877 788999999999999999998777 8999999654 2222 2234445666666 9999999999875
Q ss_pred CC
Q psy14130 299 NT 300 (494)
Q Consensus 299 ~~ 300 (494)
..
T Consensus 379 hL 380 (425)
T KOG2695|consen 379 HL 380 (425)
T ss_pred ce
Confidence 43
|
|
| >PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=98.75 E-value=3.6e-08 Score=61.00 Aligned_cols=39 Identities=31% Similarity=0.555 Sum_probs=37.0
Q ss_pred CeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEe
Q psy14130 209 GEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLD 247 (494)
Q Consensus 209 ~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd 247 (494)
++++.++.+|.+.|++|+|+|++.+|++++.|+.|++||
T Consensus 1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 467889999999999999999999999999999999997
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g .... |
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=98.75 E-value=5.3e-06 Score=88.52 Aligned_cols=200 Identities=15% Similarity=0.151 Sum_probs=124.9
Q ss_pred ccccEEEEEEcCCCCCEEEEEeCCCeEEEEECC---------------C--------CeEEEEecC--------------
Q psy14130 175 HKRRVGYIEWHPTAENVVASAGFDYLIILWDVG---------------K--------GEALTVIDC-------------- 217 (494)
Q Consensus 175 h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~---------------~--------~~~~~~~~~-------------- 217 (494)
-...|.+++||||++ +|+..+.++++.+-+-. . |+.-..|+|
T Consensus 119 vd~GI~a~~WSPD~E-lla~vT~~~~l~~mt~~fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~ 197 (928)
T PF04762_consen 119 VDSGILAASWSPDEE-LLALVTGEGNLLLMTRDFDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPT 197 (928)
T ss_pred EcCcEEEEEECCCcC-EEEEEeCCCEEEEEeccceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCC
Confidence 346799999999984 88877778888765431 0 000111111
Q ss_pred ----------CCCceEEEEEcCCCCEEEEEeC------CCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEE
Q psy14130 218 ----------HPDVINCLSFNRDGSRLVTTCK------DKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTG 281 (494)
Q Consensus 218 ----------h~~~v~~l~~~~~~~~l~s~~~------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 281 (494)
+.+.-..|+|-.||.++|+.+- -+.+|||+-+ |.+...-..-.+- -..++|-|.| .++++.
T Consensus 198 ~~~~d~~~~s~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE~v~gL-e~~l~WrPsG-~lIA~~ 274 (928)
T PF04762_consen 198 VPKVDEGKLSWDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQSTSEPVDGL-EGALSWRPSG-NLIASS 274 (928)
T ss_pred CCccccCccccCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ceEEeccccCCCc-cCCccCCCCC-CEEEEE
Confidence 2234567899999999998774 2689999965 7655444433333 4578999994 566655
Q ss_pred ecCCCCceEEEEeCCCCCCceeEeee-cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCee
Q psy14130 282 FSRHSDRQVGLWDENDLNTPLALETV-DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQR 360 (494)
Q Consensus 282 ~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~ 360 (494)
-.......|.+|.-+..+........ .....+..+.|++|+..| +..-.|. |.+|-..+-.-+.+.--.+.....+.
T Consensus 275 q~~~~~~~VvFfErNGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iL-Av~~~~~-vqLWt~~NYHWYLKqei~~~~~~~~~ 352 (928)
T PF04762_consen 275 QRLPDRHDVVFFERNGLRHGEFTLRFDPEEEKVIELAWNSDSEIL-AVWLEDR-VQLWTRSNYHWYLKQEIRFSSSESVN 352 (928)
T ss_pred EEcCCCcEEEEEecCCcEeeeEecCCCCCCceeeEEEECCCCCEE-EEEecCC-ceEEEeeCCEEEEEEEEEccCCCCCC
Confidence 33334567888875543322111111 234578999999999999 4444444 99999988765555444444455566
Q ss_pred EEEEecCCc---eeeeccceeEE
Q psy14130 361 GLGFMPKRG---CDVTQCEIFRF 380 (494)
Q Consensus 361 ~~~~~p~~~---~~~~~~~~~~~ 380 (494)
.+.|+|... .+++.++.+..
T Consensus 353 ~~~Wdpe~p~~L~v~t~~g~~~~ 375 (928)
T PF04762_consen 353 FVKWDPEKPLRLHVLTSNGQYEI 375 (928)
T ss_pred ceEECCCCCCEEEEEecCCcEEE
Confidence 799999543 23334344433
|
|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=1e-05 Score=79.09 Aligned_cols=177 Identities=14% Similarity=0.102 Sum_probs=109.5
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCC--CeEEEEECCCCeEEEEecCCCCceEEEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFD--YLIILWDVGKGEALTVIDCHPDVINCLSF 227 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d--~~v~iwd~~~~~~~~~~~~h~~~v~~l~~ 227 (494)
.|.++|+.+++. . .+....+.+....|+|+|..++++.+.+ ..|.++|+.+++. ..+..+........|
T Consensus 214 ~Iyv~dl~tg~~-------~-~lt~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~-~~LT~~~~~d~~p~~ 284 (419)
T PRK04043 214 TLYKYNLYTGKK-------E-KIASSQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKTL-TQITNYPGIDVNGNF 284 (419)
T ss_pred EEEEEECCCCcE-------E-EEecCCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCcE-EEcccCCCccCccEE
Confidence 588889877632 1 2222445566788999996666666544 4688888877763 445444443456689
Q ss_pred cCCCCEEEEEeC-CC--eEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCC----C-ceEEEEeCCCCC
Q psy14130 228 NRDGSRLVTTCK-DK--TVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHS----D-RQVGLWDENDLN 299 (494)
Q Consensus 228 ~~~~~~l~s~~~-d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~----d-~~i~iwd~~~~~ 299 (494)
+|||+.|+-.+. .+ .|.+.|+.+++..+... . +. ....|+|++..++.+...... . ..|.+.|+.+..
T Consensus 285 SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~-~-g~--~~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~ 360 (419)
T PRK04043 285 VEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVF-H-GK--NNSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDY 360 (419)
T ss_pred CCCCCEEEEEECCCCCceEEEEECCCCCeEeCcc-C-CC--cCceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCC
Confidence 999998877663 23 58888888777533322 2 21 124899998888887721111 1 478888887654
Q ss_pred CceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCc--EEEEEeeCC
Q psy14130 300 TPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGN--IRYYELTNE 343 (494)
Q Consensus 300 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~--i~~wd~~~~ 343 (494)
. ..+. .......+.|+|||+.++.+....+. +.+.++...
T Consensus 361 ~-~~LT---~~~~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l~g~ 402 (419)
T PRK04043 361 I-RRLT---ANGVNQFPRFSSDGGSIMFIKYLGNQSALGIIRLNYN 402 (419)
T ss_pred e-EECC---CCCCcCCeEECCCCCEEEEEEccCCcEEEEEEecCCC
Confidence 2 2221 11223358999999988666544444 455555443
|
|
| >KOG3914|consensus | Back alignment and domain information |
|---|
Probab=98.73 E-value=3.3e-07 Score=83.57 Aligned_cols=116 Identities=19% Similarity=0.251 Sum_probs=84.8
Q ss_pred EEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEe-
Q psy14130 179 VGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQG- 257 (494)
Q Consensus 179 V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~- 257 (494)
+..+...... .+.-.++....+.+|....+.+ ..+-||-..++.|+|+||+++|+++.+|..||+-.......+..+
T Consensus 113 i~~~~~~~sv-~v~dkagD~~~~di~s~~~~~~-~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~Iesfc 190 (390)
T KOG3914|consen 113 ISFIREDTSV-LVADKAGDVYSFDILSADSGRC-EPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFC 190 (390)
T ss_pred eeeeeccceE-EEEeecCCceeeeeecccccCc-chhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhc
Confidence 3334334333 3444455667788888766443 344579999999999999999999999999999877666555555
Q ss_pred eecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCce
Q psy14130 258 VCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPL 302 (494)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~ 302 (494)
.+|... +.+++..++ +++.+| +.|++|++||+++++.+.
T Consensus 191 lGH~eF-VS~isl~~~--~~LlS~---sGD~tlr~Wd~~sgk~L~ 229 (390)
T KOG3914|consen 191 LGHKEF-VSTISLTDN--YLLLSG---SGDKTLRLWDITSGKLLD 229 (390)
T ss_pred cccHhh-eeeeeeccC--ceeeec---CCCCcEEEEecccCCccc
Confidence 468887 888887765 445555 589999999999887753
|
|
| >KOG2041|consensus | Back alignment and domain information |
|---|
Probab=98.71 E-value=2.7e-06 Score=83.10 Aligned_cols=215 Identities=10% Similarity=0.190 Sum_probs=133.0
Q ss_pred cEEEEEcCCCCCCCCcccceEec--ccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEE-EEecCCCCceEEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDL--HGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEAL-TVIDCHPDVINCLS 226 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~--~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~-~~~~~h~~~v~~l~ 226 (494)
-|.+|-+-.+.- ...+ ....+.|.+++|+.+| +.++..-.||.|.+=.+...+.- ..+++ .....+.
T Consensus 94 lIiVWmlykgsW-------~EEMiNnRnKSvV~SmsWn~dG-~kIcIvYeDGavIVGsvdGNRIwgKeLkg--~~l~hv~ 163 (1189)
T KOG2041|consen 94 LIIVWMLYKGSW-------CEEMINNRNKSVVVSMSWNLDG-TKICIVYEDGAVIVGSVDGNRIWGKELKG--QLLAHVL 163 (1189)
T ss_pred eEEEEeeecccH-------HHHHhhCcCccEEEEEEEcCCC-cEEEEEEccCCEEEEeeccceecchhcch--hecccee
Confidence 488999887732 2222 2256778999999999 68888999999988777543321 11222 2344788
Q ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCc-------eEEEeee---cCCCCceEEEEE-------CCCCeEEEEEecCCCCce
Q psy14130 227 FNRDGSRLVTTCKDKTVRVLDPRTGL-------VISQGVC---HPGTRSSKAVFI-------GDTGRIVTTGFSRHSDRQ 289 (494)
Q Consensus 227 ~~~~~~~l~s~~~d~~v~iwd~~~~~-------~~~~~~~---~~~~~~~~~~~~-------~~~~~l~~~g~~~~~d~~ 289 (494)
|++|.+.++.+-..|.+++||....- +.-...+ ..+.++..+.|. +++.-.++++| .+|.
T Consensus 164 ws~D~~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lavcy---~nGr 240 (1189)
T KOG2041|consen 164 WSEDLEQALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVCY---ANGR 240 (1189)
T ss_pred ecccHHHHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCCEEEEEE---cCce
Confidence 99999999999999999999976321 1111111 111124444443 32345666664 7888
Q ss_pred EEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeC-------C-CcEEEEEeeCCCceEEecccccCCCCeeE
Q psy14130 290 VGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKG-------D-GNIRYYELTNERPYIHFLNQSLSGAPQRG 361 (494)
Q Consensus 290 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~-------d-g~i~~wd~~~~~~~~~~~~~~~~~~~v~~ 361 (494)
+.|-.-.+...|..+. ..-.+....|+++|..|.++|.. | +.|++|.. -|+.+..+ . ..+..|++
T Consensus 241 ~QiMR~eND~~Pvv~d---tgm~~vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fysp-~G~i~gtl-k--vpg~~It~ 313 (1189)
T KOG2041|consen 241 MQIMRSENDPEPVVVD---TGMKIVGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFYSP-YGHIVGTL-K--VPGSCITG 313 (1189)
T ss_pred ehhhhhcCCCCCeEEe---cccEeecceecCCCcEEEEccCcccccCccccceEEEecc-chhheEEE-e--cCCceeee
Confidence 8887766655555443 33567889999999999666532 1 23444432 22221111 1 13567999
Q ss_pred EEEecCCceeeec-cceeEEEEee
Q psy14130 362 LGFMPKRGCDVTQ-CEIFRFFKLH 384 (494)
Q Consensus 362 ~~~~p~~~~~~~~-~~~~~~~~l~ 384 (494)
++|-..|..++.+ |+.+.+=++.
T Consensus 314 lsWEg~gLriA~AvdsfiyfanIR 337 (1189)
T KOG2041|consen 314 LSWEGTGLRIAIAVDSFIYFANIR 337 (1189)
T ss_pred eEEcCCceEEEEEecceEEEEeec
Confidence 9998888766654 6665554443
|
|
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.6e-05 Score=74.79 Aligned_cols=193 Identities=11% Similarity=0.068 Sum_probs=119.0
Q ss_pred CcEEEEEcCCCCCCCCcccceE-ecccccccEEEEEEcCCCCCEEEEEe-C-CCeEEEEECCCCeEEEEecCCC------
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIM-DLHGHKRRVGYIEWHPTAENVVASAG-F-DYLIILWDVGKGEALTVIDCHP------ 219 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~-~~~~h~~~V~~~~~~p~~~~~l~s~s-~-d~~v~iwd~~~~~~~~~~~~h~------ 219 (494)
+.|.+||..+.+....+..+-. .+. ....-..++++|+| ++|+... . +..|.+.|+.+++.+..+.--.
T Consensus 77 d~V~v~D~~t~~~~~~i~~p~~p~~~-~~~~~~~~~ls~dg-k~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~~~~vy~ 154 (352)
T TIGR02658 77 DYVEVIDPQTHLPIADIELPEGPRFL-VGTYPWMTSLTPDN-KTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPDCYHIFP 154 (352)
T ss_pred CEEEEEECccCcEEeEEccCCCchhh-ccCccceEEECCCC-CEEEEecCCCCCEEEEEECCCCcEEEEEeCCCCcEEEE
Confidence 4699999999844332211100 000 12233478899999 5666544 3 7899999998877655432100
Q ss_pred ------------C-------------ceEEEE--------------EcC-CCCEEEEEeCCCeEEEEeCCCCc-----eE
Q psy14130 220 ------------D-------------VINCLS--------------FNR-DGSRLVTTCKDKTVRVLDPRTGL-----VI 254 (494)
Q Consensus 220 ------------~-------------~v~~l~--------------~~~-~~~~l~s~~~d~~v~iwd~~~~~-----~~ 254 (494)
+ .+.... |.+ +|+++..... |+|.+.|+.... ..
T Consensus 155 t~e~~~~~~~~Dg~~~~v~~d~~g~~~~~~~~vf~~~~~~v~~rP~~~~~dg~~~~vs~e-G~V~~id~~~~~~~~~~~~ 233 (352)
T TIGR02658 155 TANDTFFMHCRDGSLAKVGYGTKGNPKIKPTEVFHPEDEYLINHPAYSNKSGRLVWPTYT-GKIFQIDLSSGDAKFLPAI 233 (352)
T ss_pred ecCCccEEEeecCceEEEEecCCCceEEeeeeeecCCccccccCCceEcCCCcEEEEecC-CeEEEEecCCCcceeccee
Confidence 0 011111 223 6766666655 999999965433 22
Q ss_pred EEeeec-------CCCCceEEEEECCCCeEEEEEec------CCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCC
Q psy14130 255 SQGVCH-------PGTRSSKAVFIGDTGRIVTTGFS------RHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHD 321 (494)
Q Consensus 255 ~~~~~~-------~~~~~~~~~~~~~~~~l~~~g~~------~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 321 (494)
..+... .+. ..-++++++++++++.... ....+.|.++|..+.+. ...+.....+..++++||
T Consensus 234 ~~~~~~~~~~~wrP~g-~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kv---i~~i~vG~~~~~iavS~D 309 (352)
T TIGR02658 234 EAFTEAEKADGWRPGG-WQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKR---LRKIELGHEIDSINVSQD 309 (352)
T ss_pred eeccccccccccCCCc-ceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeE---EEEEeCCCceeeEEECCC
Confidence 222111 111 3348899998888875410 01235899999887554 333344568889999999
Q ss_pred CC-EEEEEEeCCCcEEEEEeeCCCceEE
Q psy14130 322 TR-ILFLAGKGDGNIRYYELTNERPYIH 348 (494)
Q Consensus 322 ~~-~l~~~g~~dg~i~~wd~~~~~~~~~ 348 (494)
++ .||++...++.|.++|..+++.+..
T Consensus 310 gkp~lyvtn~~s~~VsViD~~t~k~i~~ 337 (352)
T TIGR02658 310 AKPLLYALSTGDKTLYIFDAETGKELSS 337 (352)
T ss_pred CCeEEEEeCCCCCcEEEEECcCCeEEee
Confidence 99 8877777889999999999886544
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.69 E-value=2.1e-06 Score=75.75 Aligned_cols=161 Identities=19% Similarity=0.290 Sum_probs=107.6
Q ss_pred ccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe---EEEEecCCC-----CceEEEEEcCC-CCEEEEEeCCCeE
Q psy14130 173 HGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE---ALTVIDCHP-----DVINCLSFNRD-GSRLVTTCKDKTV 243 (494)
Q Consensus 173 ~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~---~~~~~~~h~-----~~v~~l~~~~~-~~~l~s~~~d~~v 243 (494)
..|.--|+++.|+.+.+ .++++ .|-.|.+|++.... .+..++.|. ..|++..|+|. ...+.-.+..|.|
T Consensus 169 NaH~yhiNSiS~NsD~e-t~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~I 246 (460)
T COG5170 169 NAHPYHINSISFNSDKE-TLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEI 246 (460)
T ss_pred ccceeEeeeeeecCchh-eeeec-cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcE
Confidence 45888899999999974 56554 47889999986432 233445553 56899999994 5566777788999
Q ss_pred EEEeCCCCceE------EEe----------eecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee
Q psy14130 244 RVLDPRTGLVI------SQG----------VCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV 307 (494)
Q Consensus 244 ~iwd~~~~~~~------~~~----------~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~ 307 (494)
++-|+|+..+- ... ..-... +..+.|+++ ++++.+- .--+|+|||++....|.....+
T Consensus 247 kl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsS-ISD~kFs~n-gryIlsR----dyltvkiwDvnm~k~pikTi~~ 320 (460)
T COG5170 247 KLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSS-ISDFKFSDN-GRYILSR----DYLTVKIWDVNMAKNPIKTIPM 320 (460)
T ss_pred EehhhhhhhhccCchhhhhhccCcccchhHHHHhhh-hcceEEcCC-CcEEEEe----ccceEEEEecccccCCceeech
Confidence 99999954311 000 111122 677889888 4455444 4679999999876666554311
Q ss_pred c-----------CCCce---EEeEEeCCCCEEEEEEeCCCcEEEEEeeC
Q psy14130 308 D-----------SSSGV---LFPYYDHDTRILFLAGKGDGNIRYYELTN 342 (494)
Q Consensus 308 ~-----------~~~~v---~~~~~~~~~~~l~~~g~~dg~i~~wd~~~ 342 (494)
. ....| ..+.|+-|.+.+ ++|+..+..-+|-..+
T Consensus 321 h~~l~~~l~d~YEnDaifdkFeisfSgd~~~v-~sgsy~NNfgiyp~~s 368 (460)
T COG5170 321 HCDLMDELNDVYENDAIFDKFEISFSGDDKHV-LSGSYSNNFGIYPTDS 368 (460)
T ss_pred HHHHHHHHHhhhhccceeeeEEEEecCCcccc-cccccccceeeecccc
Confidence 0 01112 346788888888 8998888888876443
|
|
| >PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal | Back alignment and domain information |
|---|
Probab=98.66 E-value=2.5e-05 Score=68.72 Aligned_cols=197 Identities=11% Similarity=0.107 Sum_probs=125.8
Q ss_pred EEEcCCCCCEEEEEeCCCeEEEEECCCC--eEEEEecCCC---CceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEE
Q psy14130 182 IEWHPTAENVVASAGFDYLIILWDVGKG--EALTVIDCHP---DVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQ 256 (494)
Q Consensus 182 ~~~~p~~~~~l~s~s~d~~v~iwd~~~~--~~~~~~~~h~---~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~ 256 (494)
++.+.+| ++||.- .|..|.|-..+.. ..+.+.+... -.=+-++|+||+.+||.+...|+|++||+.... +..
T Consensus 3 ~~~~~~G-k~lAi~-qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~-lf~ 79 (282)
T PF15492_consen 3 LALSSDG-KLLAIL-QDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMGSE-LFV 79 (282)
T ss_pred eeecCCC-cEEEEE-eccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEecccce-eEE
Confidence 4567777 466554 5778888776543 2223322222 234679999999999999999999999998543 333
Q ss_pred eeec------CCCCceEEEEECCC------CeEEEEEecCCCCceEEEEeCCCC--C---CceeEeee-cCCCceEEeEE
Q psy14130 257 GVCH------PGTRSSKAVFIGDT------GRIVTTGFSRHSDRQVGLWDENDL--N---TPLALETV-DSSSGVLFPYY 318 (494)
Q Consensus 257 ~~~~------~~~~~~~~~~~~~~------~~l~~~g~~~~~d~~i~iwd~~~~--~---~~~~~~~~-~~~~~v~~~~~ 318 (494)
+... -...+..+.|.... ..+++.. -+|.++=|-+..+ . ....+... ....+|.++.|
T Consensus 80 I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~----Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy 155 (282)
T PF15492_consen 80 IPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVIN----YRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVY 155 (282)
T ss_pred cCcccccCCccccceeeeEeeccccccccceeEEEEe----ccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEE
Confidence 3221 11225556665542 2577777 4777776665321 1 11111111 23478999999
Q ss_pred eCCCCEEEEEEeCCCc----------EEEEEeeCCCceEEecccc--------------------------cCCCCeeEE
Q psy14130 319 DHDTRILFLAGKGDGN----------IRYYELTNERPYIHFLNQS--------------------------LSGAPQRGL 362 (494)
Q Consensus 319 ~~~~~~l~~~g~~dg~----------i~~wd~~~~~~~~~~~~~~--------------------------~~~~~v~~~ 362 (494)
+|..+.|++.|+.... +.-|.+-++.|+....... .....|-.+
T Consensus 156 ~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~~~~~d~i~km 235 (282)
T PF15492_consen 156 HPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFKFFSRQGQEQDGIFKM 235 (282)
T ss_pred cCCCCEEEEeccCCCCCccccccccCceEEEEcCCCCcEEEccccCccccccccccceeeccceeeeeccccCCCceEEE
Confidence 9999999887765433 6778887776554322211 123457778
Q ss_pred EEecCCceeeec--cceeEEEEeeC
Q psy14130 363 GFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 363 ~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
..+|||.++++- +|.+.+|.+-.
T Consensus 236 SlSPdg~~La~ih~sG~lsLW~iPs 260 (282)
T PF15492_consen 236 SLSPDGSLLACIHFSGSLSLWEIPS 260 (282)
T ss_pred EECCCCCEEEEEEcCCeEEEEecCc
Confidence 999999999884 99999999876
|
|
| >KOG2314|consensus | Back alignment and domain information |
|---|
Probab=98.66 E-value=6.9e-06 Score=78.10 Aligned_cols=243 Identities=11% Similarity=0.171 Sum_probs=145.5
Q ss_pred CccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEe
Q psy14130 117 NAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAG 196 (494)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s 196 (494)
.-|.-++..|+|....++..-.. .|.+|--++- ..++.+. |. .|.-+.|||+. ++|+|=|
T Consensus 209 enWTetyv~wSP~GTYL~t~Hk~----------GI~lWGG~~f-------~r~~RF~-Hp-~Vq~idfSP~E-kYLVT~s 268 (698)
T KOG2314|consen 209 ENWTETYVRWSPKGTYLVTFHKQ----------GIALWGGESF-------DRIQRFY-HP-GVQFIDFSPNE-KYLVTYS 268 (698)
T ss_pred hcceeeeEEecCCceEEEEEecc----------ceeeecCccH-------HHHHhcc-CC-CceeeecCCcc-ceEEEec
Confidence 33666777777776555544333 3899976654 2333333 54 48899999996 8999876
Q ss_pred C-----------CCeEEEEECCCCeEEEEecCCC--Cce-EEEEEcCCCCEEEEEeCCCeEEEEeCCCC-----------
Q psy14130 197 F-----------DYLIILWDVGKGEALTVIDCHP--DVI-NCLSFNRDGSRLVTTCKDKTVRVLDPRTG----------- 251 (494)
Q Consensus 197 ~-----------d~~v~iwd~~~~~~~~~~~~h~--~~v-~~l~~~~~~~~l~s~~~d~~v~iwd~~~~----------- 251 (494)
. ...++|||+.+|...+.+.... ..+ .-..||.|++++|.-..| .|.||+..+-
T Consensus 269 ~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~~-sisIyEtpsf~lld~Kslki~ 347 (698)
T KOG2314|consen 269 PEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTGN-SISIYETPSFMLLDKKSLKIS 347 (698)
T ss_pred CCccccCcccCCCceEEEEEccccchhcceeccCCCccccceEEeccCCceeEEeccc-eEEEEecCceeeecccccCCc
Confidence 4 2579999999999888776522 222 236788888888866554 5666654221
Q ss_pred ------------------------------------ceEEEeeecCCCCceEEEEECCCCeEEEEEe---cC----CCCc
Q psy14130 252 ------------------------------------LVISQGVCHPGTRSSKAVFIGDTGRIVTTGF---SR----HSDR 288 (494)
Q Consensus 252 ------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~---~~----~~d~ 288 (494)
+.+++-..+.-. -+.+-|-.+ +..|+.-. .+ +.-.
T Consensus 348 gIr~FswsP~~~llAYwtpe~~~~parvtL~evPs~~~iRt~nlfnVs-DckLhWQk~-gdyLcvkvdR~tK~~~~g~f~ 425 (698)
T KOG2314|consen 348 GIRDFSWSPTSNLLAYWTPETNNIPARVTLMEVPSKREIRTKNLFNVS-DCKLHWQKS-GDYLCVKVDRHTKSKVKGQFS 425 (698)
T ss_pred cccCcccCCCcceEEEEcccccCCcceEEEEecCccceeeeccceeee-ccEEEeccC-CcEEEEEEEeeccccccceEe
Confidence 111111111111 122334444 33333211 11 1123
Q ss_pred eEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeC--CCcEEEEEeeCCCceEEecccccCCCCeeEEEEec
Q psy14130 289 QVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKG--DGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMP 366 (494)
Q Consensus 289 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~--dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p 366 (494)
.+.|+.++....|+.. .+-...+...+|.|.|..+.+..+. ..++.+|.+.+......++..+.. ...+.+-|+|
T Consensus 426 n~eIfrireKdIpve~--velke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~dk-~~~N~vfwsP 502 (698)
T KOG2314|consen 426 NLEIFRIREKDIPVEV--VELKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELDK-KFANTVFWSP 502 (698)
T ss_pred eEEEEEeeccCCCcee--eecchheeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhhhhcc-cccceEEEcC
Confidence 4667777765555443 3345678999999999887444433 356999999843222333444432 5678899999
Q ss_pred CCceeeec-----cceeEEEEeeC
Q psy14130 367 KRGCDVTQ-----CEIFRFFKLHT 385 (494)
Q Consensus 367 ~~~~~~~~-----~~~~~~~~l~~ 385 (494)
+|.++|.+ .+.+.+++...
T Consensus 503 kG~fvvva~l~s~~g~l~F~D~~~ 526 (698)
T KOG2314|consen 503 KGRFVVVAALVSRRGDLEFYDTDY 526 (698)
T ss_pred CCcEEEEEEecccccceEEEecch
Confidence 99988764 66777777663
|
|
| >PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=98.66 E-value=7.9e-08 Score=59.43 Aligned_cols=38 Identities=32% Similarity=0.652 Sum_probs=35.5
Q ss_pred cceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEE
Q psy14130 167 EWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWD 205 (494)
Q Consensus 167 ~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd 205 (494)
+++.++.+|...|++|+|+|++ .+|++|+.|++|++||
T Consensus 2 ~~~~~~~~h~~~i~~i~~~~~~-~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 2 KCVRTFRGHSSSINSIAWSPDG-NFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEESSSSSEEEEEEETTS-SEEEEEETTSEEEEEE
T ss_pred eEEEEEcCCCCcEEEEEEeccc-ccceeeCCCCEEEEEC
Confidence 4677899999999999999997 7999999999999998
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g .... |
| >KOG1275|consensus | Back alignment and domain information |
|---|
Probab=98.65 E-value=6.8e-07 Score=89.51 Aligned_cols=185 Identities=13% Similarity=0.162 Sum_probs=135.8
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEE
Q psy14130 190 NVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAV 269 (494)
Q Consensus 190 ~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 269 (494)
..++.|+.-..+..+|+++.+..+...-....|+-+.. +++.+.+|...|+|.+-|+++.+.++++.+|.+. +..
T Consensus 148 ~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR~--Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~s-iSD-- 222 (1118)
T KOG1275|consen 148 STLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMRY--NNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGS-ISD-- 222 (1118)
T ss_pred cceeecchhhheeeeecccceeeeeeeccCCceEEEEe--cCcEEEeecccceEEeecCCcCceeeeeeccccc-eee--
Confidence 45677777778888999988877766544445666655 5889999999999999999999999999999986 554
Q ss_pred EECCCCeEEEEEecCC-----CCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeC-C
Q psy14130 270 FIGDTGRIVTTGFSRH-----SDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTN-E 343 (494)
Q Consensus 270 ~~~~~~~l~~~g~~~~-----~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~-~ 343 (494)
|.-.|+.|+++||+.. .|.-|+|||+|..+....+. -..+...+.|.|.-...++..+..|...+-|..+ +
T Consensus 223 fDv~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~---~~~~P~flrf~Psl~t~~~V~S~sGq~q~vd~~~ls 299 (1118)
T KOG1275|consen 223 FDVQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQ---FPYGPQFLRFHPSLTTRLAVTSQSGQFQFVDTATLS 299 (1118)
T ss_pred eeccCCeEEEeecccccccccccchhhhhhhhhhhccCCcc---cccCchhhhhcccccceEEEEecccceeeccccccC
Confidence 4456679999998643 37889999999866533332 3334466778886555557778889999999433 2
Q ss_pred CceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEE
Q psy14130 344 RPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFK 382 (494)
Q Consensus 344 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~ 382 (494)
.+..........+..+.++++++.+..++.+ ++.+.+|.
T Consensus 300 NP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 300 NPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWA 340 (1118)
T ss_pred CCccceeEEccCCCcceeEEecCCCceEEEecccCcEeeec
Confidence 2212222223334559999999999988886 78899997
|
|
| >KOG1409|consensus | Back alignment and domain information |
|---|
Probab=98.64 E-value=6.2e-06 Score=73.91 Aligned_cols=231 Identities=12% Similarity=0.122 Sum_probs=156.3
Q ss_pred cCCcEEEEEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCC----CeEEE
Q psy14130 138 AGGGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGK----GEALT 213 (494)
Q Consensus 138 ~~~g~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~----~~~~~ 213 (494)
...|.+.+..+.+++||--.+...- .-.....-..+++++.++++. ..|+.|-..|++.-+.+.. ....+
T Consensus 35 ~e~gv~~~s~drtvrv~lkrds~q~-----wpsI~~~mP~~~~~~~y~~e~-~~L~vg~~ngtvtefs~sedfnkm~~~r 108 (404)
T KOG1409|consen 35 KEEGVISVSEDRTVRVWLKRDSGQY-----WPSIYHYMPSPCSAMEYVSES-RRLYVGQDNGTVTEFALSEDFNKMTFLK 108 (404)
T ss_pred CCCCeEEccccceeeeEEecccccc-----CchhhhhCCCCceEeeeeccc-eEEEEEEecceEEEEEhhhhhhhcchhh
Confidence 3455666666678999975544221 111112245678999999987 6899999999998887643 33455
Q ss_pred EecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEE
Q psy14130 214 VIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLW 293 (494)
Q Consensus 214 ~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iw 293 (494)
....|...|..+-|+-....+++.+.|+.+.---.+.+..+..+..... ..+....+..+|.+...|.|.+-
T Consensus 109 ~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~--------~t~~~~d~~~~fvGd~~gqvt~l 180 (404)
T KOG1409|consen 109 DYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFETP--------ASALQFDALYAFVGDHSGQITML 180 (404)
T ss_pred hhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEeecc--------CCCCceeeEEEEecccccceEEE
Confidence 5667999999999999999999999998876554455543322211111 01112222244444777888777
Q ss_pred eCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeee
Q psy14130 294 DENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVT 373 (494)
Q Consensus 294 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~ 373 (494)
.+...........-++...+.++.|++..+.| .+|..|..+.+||+...+-....+.. +...|+.+...+--..+.+
T Consensus 181 r~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~L-fSg~~d~~vi~wdigg~~g~~~el~g--h~~kV~~l~~~~~t~~l~S 257 (404)
T KOG1409|consen 181 KLEQNGCQLITTFNGHTGEVTCLKWDPGQRLL-FSGASDHSVIMWDIGGRKGTAYELQG--HNDKVQALSYAQHTRQLIS 257 (404)
T ss_pred EEeecCCceEEEEcCcccceEEEEEcCCCcEE-EeccccCceEEEeccCCcceeeeecc--chhhhhhhhhhhhheeeee
Confidence 76654555555556788999999999998888 89999999999999876654444433 3456777777665444444
Q ss_pred --ccceeEEEEeeC
Q psy14130 374 --QCEIFRFFKLHT 385 (494)
Q Consensus 374 --~~~~~~~~~l~~ 385 (494)
.|+.+-+|+.+.
T Consensus 258 ~~edg~i~~w~mn~ 271 (404)
T KOG1409|consen 258 CGEDGGIVVWNMNV 271 (404)
T ss_pred ccCCCeEEEEeccc
Confidence 488999999876
|
|
| >KOG4190|consensus | Back alignment and domain information |
|---|
Probab=98.64 E-value=1e-07 Score=89.98 Aligned_cols=196 Identities=15% Similarity=0.139 Sum_probs=126.8
Q ss_pred cCCcEEEEEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEec-
Q psy14130 138 AGGGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVID- 216 (494)
Q Consensus 138 ~~~g~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~- 216 (494)
..+..+....+.+|++|.+...+-......+..+++.|+.+|.++.|-.+- +.++++ ||.|.+||.-.+..+..+.
T Consensus 746 NENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~l-r~i~Sc--D~giHlWDPFigr~Laq~~d 822 (1034)
T KOG4190|consen 746 NENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADL-RSIASC--DGGIHLWDPFIGRLLAQMED 822 (1034)
T ss_pred cccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeecc-ceeeec--cCcceeecccccchhHhhhc
Confidence 444555566667899999987654444446778899999999999999886 567655 8999999998887665432
Q ss_pred -CCCCceEEEEEcCC--CCEE-EEEeCCCeEEEEeCCCCceEEEeeecC----CCCceEEEEECCCCeEEEEEecCCCCc
Q psy14130 217 -CHPDVINCLSFNRD--GSRL-VTTCKDKTVRVLDPRTGLVISQGVCHP----GTRSSKAVFIGDTGRIVTTGFSRHSDR 288 (494)
Q Consensus 217 -~h~~~v~~l~~~~~--~~~l-~s~~~d~~v~iwd~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~g~~~~~d~ 288 (494)
...+.+..+..-++ ...+ +.++...+|+++|.+.++...+++... ...+.+++..+. +..+++| -++|
T Consensus 823 apk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaVa~~-GN~lAa~---LSnG 898 (1034)
T KOG4190|consen 823 APKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAVADK-GNKLAAA---LSNG 898 (1034)
T ss_pred CcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEEEeccC-cchhhHH---hcCC
Confidence 12233334444443 3333 344678999999999998666654321 121344444454 6666777 5899
Q ss_pred eEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEE-EEeeCCC
Q psy14130 289 QVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRY-YELTNER 344 (494)
Q Consensus 289 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~-wd~~~~~ 344 (494)
.|.+.|.|++...-..... ......++ .|..+.| +....|.++.+ |....+.
T Consensus 899 ci~~LDaR~G~vINswrpm--ecdllqla-apsdq~L-~~saldHslaVnWhaldgi 951 (1034)
T KOG4190|consen 899 CIAILDARNGKVINSWRPM--ECDLLQLA-APSDQAL-AQSALDHSLAVNWHALDGI 951 (1034)
T ss_pred cEEEEecCCCceeccCCcc--cchhhhhc-CchhHHH-HhhcccceeEeeehhcCCe
Confidence 9999999987642222111 11122222 3555666 66677888888 8877764
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=98.63 E-value=3.6e-05 Score=72.05 Aligned_cols=218 Identities=12% Similarity=0.078 Sum_probs=138.1
Q ss_pred cCCcEEEEEEcCcEEEEEcCCCCCCCC-cccceEe---cccccccEEEEE-EcCCCCCEEEEEeCCCeEEEEECCCCeEE
Q psy14130 138 AGGGAFLVLPIHRVKLWYIPDGGLSGN-LNEWIMD---LHGHKRRVGYIE-WHPTAENVVASAGFDYLIILWDVGKGEAL 212 (494)
Q Consensus 138 ~~~g~~~~~~~~~v~iw~~~~~~~~~~-~~~~~~~---~~~h~~~V~~~~-~~p~~~~~l~s~s~d~~v~iwd~~~~~~~ 212 (494)
++|.+++....+.|.+||-.+..+..- +.-++.. ..-...+..-+. |++....+++..|. |...+.+...+-.+
T Consensus 276 sDGkrIvFq~~GdIylydP~td~lekldI~lpl~rk~k~~k~~~pskyledfa~~~Gd~ia~VSR-GkaFi~~~~~~~~i 354 (668)
T COG4946 276 SDGKRIVFQNAGDIYLYDPETDSLEKLDIGLPLDRKKKQPKFVNPSKYLEDFAVVNGDYIALVSR-GKAFIMRPWDGYSI 354 (668)
T ss_pred CCCcEEEEecCCcEEEeCCCcCcceeeecCCccccccccccccCHHHhhhhhccCCCcEEEEEec-CcEEEECCCCCeeE
Confidence 445556666667899999877654311 1001110 000111111222 44443468888885 66777776555443
Q ss_pred EEecCCCCceEEEEEcCCCCEEEEEeCCC-eEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEE
Q psy14130 213 TVIDCHPDVINCLSFNRDGSRLVTTCKDK-TVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVG 291 (494)
Q Consensus 213 ~~~~~h~~~v~~l~~~~~~~~l~s~~~d~-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~ 291 (494)
+ + +|.+.|.-..+..++.-++.|..|| .+-|+|.++++. ..+...-+. +.++..+++ +..++++ ....+|.
T Consensus 355 q-v-~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~-kr~e~~lg~-I~av~vs~d-GK~~vva---Ndr~el~ 426 (668)
T COG4946 355 Q-V-GKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEV-KRIEKDLGN-IEAVKVSPD-GKKVVVA---NDRFELW 426 (668)
T ss_pred E-c-CCCCceEEEEEccCCcceEEeccCCceEEEEecCCceE-EEeeCCccc-eEEEEEcCC-CcEEEEE---cCceEEE
Confidence 3 2 4777898888888888999999999 999999998874 344444444 888888888 5555555 4778899
Q ss_pred EEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCC----CcEEEEEeeCCCceEEecccccCCCCeeEEEEecC
Q psy14130 292 LWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGD----GNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPK 367 (494)
Q Consensus 292 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~d----g~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 367 (494)
+.|+.++.....- .....-|+...|+|+++++ +-+--+ ..|++||+.+++.+. ..... .-=-+-+|.|+
T Consensus 427 vididngnv~~id--kS~~~lItdf~~~~nsr~i-AYafP~gy~tq~Iklydm~~~Kiy~-vTT~t---a~DfsPaFD~d 499 (668)
T COG4946 427 VIDIDNGNVRLID--KSEYGLITDFDWHPNSRWI-AYAFPEGYYTQSIKLYDMDGGKIYD-VTTPT---AYDFSPAFDPD 499 (668)
T ss_pred EEEecCCCeeEec--ccccceeEEEEEcCCceeE-EEecCcceeeeeEEEEecCCCeEEE-ecCCc---ccccCcccCCC
Confidence 9999986643222 1233568889999999999 554444 459999999987532 22211 11234467778
Q ss_pred Ccee
Q psy14130 368 RGCD 371 (494)
Q Consensus 368 ~~~~ 371 (494)
+..+
T Consensus 500 ~ryL 503 (668)
T COG4946 500 GRYL 503 (668)
T ss_pred CcEE
Confidence 7644
|
|
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=98.63 E-value=7.9e-05 Score=67.85 Aligned_cols=204 Identities=19% Similarity=0.145 Sum_probs=124.3
Q ss_pred EEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc-CCCCEEEEEeCCCeEEEEeCCCCceEEEeee
Q psy14130 181 YIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN-RDGSRLVTTCKDKTVRVLDPRTGLVISQGVC 259 (494)
Q Consensus 181 ~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~ 259 (494)
+..|.+....++++--..+.|..||..+++... +.... ..++++. +++ .|+.+..++ +.++|+.+++.......
T Consensus 4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~-~~~~~--~~G~~~~~~~g-~l~v~~~~~-~~~~d~~~g~~~~~~~~ 78 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEV-IDLPG--PNGMAFDRPDG-RLYVADSGG-IAVVDPDTGKVTVLADL 78 (246)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTTEEEE-EESSS--EEEEEEECTTS-EEEEEETTC-EEEEETTTTEEEEEEEE
T ss_pred ceEEECCCCEEEEEEcCCCEEEEEECCCCeEEE-EecCC--CceEEEEccCC-EEEEEEcCc-eEEEecCCCcEEEEeec
Confidence 678888443688887788999999998876543 33222 7788888 565 455555544 55569998874333332
Q ss_pred ----cCCCCceEEEEECCCCeEEEEEecCC---CC--ceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEe
Q psy14130 260 ----HPGTRSSKAVFIGDTGRIVTTGFSRH---SD--RQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGK 330 (494)
Q Consensus 260 ----~~~~~~~~~~~~~~~~~l~~~g~~~~---~d--~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~ 330 (494)
+.....+.+++.+++ .++++..... .. +.|..++.. ...... .........++|+|+++.||++-+
T Consensus 79 ~~~~~~~~~~ND~~vd~~G-~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~---~~~~~~pNGi~~s~dg~~lyv~ds 153 (246)
T PF08450_consen 79 PDGGVPFNRPNDVAVDPDG-NLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVV---ADGLGFPNGIAFSPDGKTLYVADS 153 (246)
T ss_dssp ETTCSCTEEEEEEEE-TTS--EEEEEECCBCTTCGGSEEEEEEETT-SEEEEE---EEEESSEEEEEEETTSSEEEEEET
T ss_pred cCCCcccCCCceEEEcCCC-CEEEEecCCCccccccccceEEECCC-CeEEEE---ecCcccccceEECCcchheeeccc
Confidence 133447788999985 4555541100 01 567777766 222221 223345778999999999989999
Q ss_pred CCCcEEEEEeeCCCc-eE--EecccccCC-CCeeEEEEecCCceeeeccceeEEEEeeCCCCeEEEeE
Q psy14130 331 GDGNIRYYELTNERP-YI--HFLNQSLSG-APQRGLGFMPKRGCDVTQCEIFRFFKLHTTRNMCEPIS 394 (494)
Q Consensus 331 ~dg~i~~wd~~~~~~-~~--~~~~~~~~~-~~v~~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 394 (494)
..+.|..|++..... +. +........ ....++++..+|.+.++.-...+|+.++.....+.-+.
T Consensus 154 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~G~~~~~i~ 221 (246)
T PF08450_consen 154 FNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPDGKLLREIE 221 (246)
T ss_dssp TTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETTSCEEEEEE
T ss_pred ccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCCccEEEEEc
Confidence 999999999975432 11 112222222 24789999999998888533344444444223444443
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >KOG1645|consensus | Back alignment and domain information |
|---|
Probab=98.61 E-value=9.8e-07 Score=80.51 Aligned_cols=94 Identities=16% Similarity=0.101 Sum_probs=78.6
Q ss_pred EEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCC
Q psy14130 151 VKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRD 230 (494)
Q Consensus 151 v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~ 230 (494)
|+..+..+- +...-+.+|...|..++|+|..+-++..++.+..|+|.|+++...+..+..+ ..+++++|.-|
T Consensus 175 v~~l~~~~f-------kssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDld 246 (463)
T KOG1645|consen 175 VQKLESHDF-------KSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLD 246 (463)
T ss_pred eEEeccCCc-------chhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccC
Confidence 566655544 4445677899999999999987558999999999999999999988888877 88999999986
Q ss_pred CC-EEEEEeCCCeEEEEeCCCCc
Q psy14130 231 GS-RLVTTCKDKTVRVLDPRTGL 252 (494)
Q Consensus 231 ~~-~l~s~~~d~~v~iwd~~~~~ 252 (494)
.. +|..|...|.|.|||++..+
T Consensus 247 e~h~IYaGl~nG~VlvyD~R~~~ 269 (463)
T KOG1645|consen 247 ERHVIYAGLQNGMVLVYDMRQPE 269 (463)
T ss_pred CcceeEEeccCceEEEEEccCCC
Confidence 55 67777889999999999765
|
|
| >PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal | Back alignment and domain information |
|---|
Probab=98.61 E-value=7.4e-05 Score=65.88 Aligned_cols=204 Identities=16% Similarity=0.135 Sum_probs=121.9
Q ss_pred cCCcEEEEEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecC
Q psy14130 138 AGGGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDC 217 (494)
Q Consensus 138 ~~~g~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~ 217 (494)
+.|..+++..+..|.|-...+.= ...+.++ +..+.....=.-++|+|++ .+||.+...|+|+++|+.. ..+..+..
T Consensus 7 ~~Gk~lAi~qd~~iEiRsa~Ddf-~si~~kc-qVpkD~~PQWRkl~WSpD~-tlLa~a~S~G~i~vfdl~g-~~lf~I~p 82 (282)
T PF15492_consen 7 SDGKLLAILQDQCIEIRSAKDDF-SSIIGKC-QVPKDPNPQWRKLAWSPDC-TLLAYAESTGTIRVFDLMG-SELFVIPP 82 (282)
T ss_pred CCCcEEEEEeccEEEEEeccCCc-hheeEEE-ecCCCCCchheEEEECCCC-cEEEEEcCCCeEEEEeccc-ceeEEcCc
Confidence 34445556666666666554431 0000011 1222222334679999998 7999999999999999964 44444432
Q ss_pred -------CCCceEEEEEcCC------CCEEEEEeCCCeEEEEeCCCC-----ceEEE--eeecCCCCceEEEEECCCCeE
Q psy14130 218 -------HPDVINCLSFNRD------GSRLVTTCKDKTVRVLDPRTG-----LVISQ--GVCHPGTRSSKAVFIGDTGRI 277 (494)
Q Consensus 218 -------h~~~v~~l~~~~~------~~~l~s~~~d~~v~iwd~~~~-----~~~~~--~~~~~~~~~~~~~~~~~~~~l 277 (494)
-...|.++.|.+. ...|+.-..+|.++=|-+..+ +..+. +..|-...+..++|+|....|
T Consensus 83 ~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~LL 162 (282)
T PF15492_consen 83 AMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHRLL 162 (282)
T ss_pred ccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCCCEE
Confidence 2345677777652 225666777888877765322 22333 333433348999999986666
Q ss_pred EEEEecCCCCc-------eEEEEeCCCCCCc-----------------------ee--Ee--eecCCCceEEeEEeCCCC
Q psy14130 278 VTTGFSRHSDR-------QVGLWDENDLNTP-----------------------LA--LE--TVDSSSGVLFPYYDHDTR 323 (494)
Q Consensus 278 ~~~g~~~~~d~-------~i~iwd~~~~~~~-----------------------~~--~~--~~~~~~~v~~~~~~~~~~ 323 (494)
+++|.....++ -+.-|.+-+...- .. +. .......|..+..||||+
T Consensus 163 lVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~~~~~d~i~kmSlSPdg~ 242 (282)
T PF15492_consen 163 LVGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFKFFSRQGQEQDGIFKMSLSPDGS 242 (282)
T ss_pred EEeccCCCCCccccccccCceEEEEcCCCCcEEEccccCccccccccccceeeccceeeeeccccCCCceEEEEECCCCC
Confidence 66663222221 2555653221110 00 00 011246788899999999
Q ss_pred EEEEEEeCCCcEEEEEeeCCCce
Q psy14130 324 ILFLAGKGDGNIRYYELTNERPY 346 (494)
Q Consensus 324 ~l~~~g~~dg~i~~wd~~~~~~~ 346 (494)
.| ++...+|.|.+|++.+-+..
T Consensus 243 ~L-a~ih~sG~lsLW~iPsL~~~ 264 (282)
T PF15492_consen 243 LL-ACIHFSGSLSLWEIPSLRLQ 264 (282)
T ss_pred EE-EEEEcCCeEEEEecCcchhh
Confidence 99 88899999999999886653
|
|
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=98.59 E-value=0.00014 Score=66.03 Aligned_cols=220 Identities=15% Similarity=0.103 Sum_probs=138.8
Q ss_pred cEEEEEcCCCCCCCCcc-cceEecccccccEEEEEEcCCCCCEEEEEeC-----CCeEEEEECC-CCeEEEEecCCCCce
Q psy14130 150 RVKLWYIPDGGLSGNLN-EWIMDLHGHKRRVGYIEWHPTAENVVASAGF-----DYLIILWDVG-KGEALTVIDCHPDVI 222 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~-~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~-----d~~v~iwd~~-~~~~~~~~~~h~~~v 222 (494)
-..+||..++.....+. .+-+.+.|| -.|+++| .+|++.-. .|.|-|||.. +-+.+..+..|.-..
T Consensus 29 ~~~v~D~~~g~~~~~~~a~~gRHFyGH------g~fs~dG-~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~GIGP 101 (305)
T PF07433_consen 29 FALVFDCRTGQLLQRLWAPPGRHFYGH------GVFSPDG-RLLYTTENDYETGRGVIGVYDAARGYRRIGEFPSHGIGP 101 (305)
T ss_pred EEEEEEcCCCceeeEEcCCCCCEEecC------EEEcCCC-CEEEEeccccCCCcEEEEEEECcCCcEEEeEecCCCcCh
Confidence 36778887774432221 122344555 5699999 57777644 4799999998 567788888888788
Q ss_pred EEEEEcCCCCEEEEEe------------------CCCeEEEEeCCCCceEEEeee----cCCCCceEEEEECCCCeEEEE
Q psy14130 223 NCLSFNRDGSRLVTTC------------------KDKTVRVLDPRTGLVISQGVC----HPGTRSSKAVFIGDTGRIVTT 280 (494)
Q Consensus 223 ~~l~~~~~~~~l~s~~------------------~d~~v~iwd~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~ 280 (494)
..+.+.|||+.|+.+- .+-.+...|.++|+++.+... |..+ +..+++.++ +.++..
T Consensus 102 Hel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lS-iRHLa~~~~-G~V~~a 179 (305)
T PF07433_consen 102 HELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLS-IRHLAVDGD-GTVAFA 179 (305)
T ss_pred hhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCccccccc-eeeEEecCC-CcEEEE
Confidence 8899999998877662 234567778899997777432 5555 788888887 444443
Q ss_pred E-ecCC---CCceEEEEeCCCCCCceeEe---eecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccc
Q psy14130 281 G-FSRH---SDRQVGLWDENDLNTPLALE---TVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQS 353 (494)
Q Consensus 281 g-~~~~---~d~~i~iwd~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~ 353 (494)
. |... .--.|-+++....-...... ...-...+-++++++++..+++|+-.-+.+.+||..+++.+... .
T Consensus 180 ~Q~qg~~~~~~PLva~~~~g~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~~~~~-~-- 256 (305)
T PF07433_consen 180 MQYQGDPGDAPPLVALHRRGGALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRLLGSV-P-- 256 (305)
T ss_pred EecCCCCCccCCeEEEEcCCCcceeccCChHHHHhhCCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCEeecc-c--
Confidence 3 1111 01123344332211100000 01123568899999999999888888899999999999753221 1
Q ss_pred cCCCCeeEEEEecCCceeeeccceeEEEEeeC
Q psy14130 354 LSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 354 ~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~~ 385 (494)
-.-+.+++-.+++ ++.+++...++.+..
T Consensus 257 --l~D~cGva~~~~~--f~~ssG~G~~~~~~~ 284 (305)
T PF07433_consen 257 --LPDACGVAPTDDG--FLVSSGQGQLIRLSP 284 (305)
T ss_pred --cCceeeeeecCCc--eEEeCCCccEEEccC
Confidence 1236677777776 444455556666655
|
|
| >KOG4532|consensus | Back alignment and domain information |
|---|
Probab=98.58 E-value=4.5e-06 Score=72.26 Aligned_cols=218 Identities=11% Similarity=0.032 Sum_probs=134.5
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCC----CCEEEEEeCCCeEEEEECCCCeE-EEEecCCCCceEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTA----ENVVASAGFDYLIILWDVGKGEA-LTVIDCHPDVINC 224 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~----~~~l~s~s~d~~v~iwd~~~~~~-~~~~~~h~~~v~~ 224 (494)
.+.+|++-+.. +.+..+. ..+.|-|.. .-+||.|+..|...+|...+.+. +.....|...|+-
T Consensus 53 sv~i~~~y~N~------~~iv~~y------~g~~F~p~s~~~kc~~la~gG~~g~fd~~~~~tn~~h~~~cd~snn~v~~ 120 (344)
T KOG4532|consen 53 SVPINSHYSNP------KGIVEFY------TGMTFTPGSFINKCVTLADGGASGQFDLFACNTNDGHLYQCDVSNNDVTL 120 (344)
T ss_pred eeEeccccCCc------hhhEEee------ecccccchHhhccccEEEeccccceeeeecccCcccceeeecccccchhh
Confidence 47888876652 1111111 345555531 13799999999999999986553 3333444443332
Q ss_pred EEEcC-CCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCcee
Q psy14130 225 LSFNR-DGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLA 303 (494)
Q Consensus 225 l~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~ 303 (494)
+.=.- ....+..++.|.++++.++.-+.......... -....+.+++++..+.++| ..+.|..|.+........
T Consensus 121 ~~r~cd~~~~~~i~sndht~k~~~~~~~s~~~~~h~~~-~~~ns~~~snd~~~~~~Vg----ds~~Vf~y~id~~sey~~ 195 (344)
T KOG4532|consen 121 VKRYCDLKFPLNIASNDHTGKTMVVSGDSNKFAVHNQN-LTQNSLHYSNDPSWGSSVG----DSRRVFRYAIDDESEYIE 195 (344)
T ss_pred hhhhcccccceeeccCCcceeEEEEecCcccceeeccc-cceeeeEEcCCCceEEEec----CCCcceEEEeCCccceee
Confidence 21111 22356677888888888887554333222222 2267788899866667777 788999999876443222
Q ss_pred E-eeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecc--cccCCCCeeEEEEecCCce---eeec-cc
Q psy14130 304 L-ETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLN--QSLSGAPQRGLGFMPKRGC---DVTQ-CE 376 (494)
Q Consensus 304 ~-~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~--~~~~~~~v~~~~~~p~~~~---~~~~-~~ 376 (494)
. ...+....-.+..|+.....+ |++..||++.|||++.......... ...+.+.++.+.|+|.|.+ +.+. -+
T Consensus 196 ~~~~a~t~D~gF~~S~s~~~~~F-Av~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs 274 (344)
T KOG4532|consen 196 NIYEAPTSDHGFYNSFSENDLQF-AVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFS 274 (344)
T ss_pred eeEecccCCCceeeeeccCcceE-EEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcc
Confidence 2 233344455667888777666 9999999999999997543222221 2235688999999997763 3333 45
Q ss_pred eeEEEEeeC
Q psy14130 377 IFRFFKLHT 385 (494)
Q Consensus 377 ~~~~~~l~~ 385 (494)
.+.+.++..
T Consensus 275 ~~hv~D~R~ 283 (344)
T KOG4532|consen 275 RVHVVDTRN 283 (344)
T ss_pred eEEEEEccc
Confidence 566666665
|
|
| >KOG1275|consensus | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.4e-06 Score=87.31 Aligned_cols=177 Identities=16% Similarity=0.165 Sum_probs=128.9
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcC
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNR 229 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~ 229 (494)
.+-.+|+.+.+ ..+...-....|.-|+-+ + +.+.+|...|+|.+-|+++.+.+.++..|.+.|..+..
T Consensus 158 ~li~~Dl~~~~-------e~r~~~v~a~~v~imR~N--n-r~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDfDv-- 225 (1118)
T KOG1275|consen 158 KLIHIDLNTEK-------ETRTTNVSASGVTIMRYN--N-RNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDFDV-- 225 (1118)
T ss_pred heeeeecccce-------eeeeeeccCCceEEEEec--C-cEEEeecccceEEeecCCcCceeeeeeccccceeeeec--
Confidence 35556666552 222222223346666654 3 68999999999999999999999999999999987655
Q ss_pred CCCEEEEEeC---------CCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCC
Q psy14130 230 DGSRLVTTCK---------DKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNT 300 (494)
Q Consensus 230 ~~~~l~s~~~---------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~ 300 (494)
.|++|++++. |..|++||+|.-+.+..+..+.++ .-+.|+|.-...+++. +..|+..+-|..+...
T Consensus 226 ~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P--~flrf~Psl~t~~~V~---S~sGq~q~vd~~~lsN 300 (1118)
T KOG1275|consen 226 QGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGP--QFLRFHPSLTTRLAVT---SQSGQFQFVDTATLSN 300 (1118)
T ss_pred cCCeEEEeecccccccccccchhhhhhhhhhhccCCcccccCc--hhhhhcccccceEEEE---ecccceeeccccccCC
Confidence 5889999985 567899999998877777777665 4566777655555555 5899999999544433
Q ss_pred c-eeEeee-cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCc
Q psy14130 301 P-LALETV-DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERP 345 (494)
Q Consensus 301 ~-~~~~~~-~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~ 345 (494)
| ...... ...+.+..+.+++++..| +.|..+|.|.+|- ...++
T Consensus 301 P~~~~~~v~p~~s~i~~fDiSsn~~al-afgd~~g~v~~wa-~~~~P 345 (1118)
T KOG1275|consen 301 PPAGVKMVNPNGSGISAFDISSNGDAL-AFGDHEGHVNLWA-DRPQP 345 (1118)
T ss_pred CccceeEEccCCCcceeEEecCCCceE-EEecccCcEeeec-CCCCC
Confidence 3 222222 344568999999999999 9999999999998 44333
|
|
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=98.55 E-value=0.00034 Score=63.67 Aligned_cols=195 Identities=15% Similarity=0.085 Sum_probs=122.2
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEc-CCCCCEEEEEeCCCeEEEEECCCCeEEEEecC-----CCCceE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWH-PTAENVVASAGFDYLIILWDVGKGEALTVIDC-----HPDVIN 223 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~-p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~-----h~~~v~ 223 (494)
+|..|+..++. .. .+... . ...+++. +++ .|+.+..++ +.++|+.+++....... .....+
T Consensus 23 ~i~~~~~~~~~-------~~-~~~~~-~-~~G~~~~~~~g--~l~v~~~~~-~~~~d~~~g~~~~~~~~~~~~~~~~~~N 89 (246)
T PF08450_consen 23 RIYRVDPDTGE-------VE-VIDLP-G-PNGMAFDRPDG--RLYVADSGG-IAVVDPDTGKVTVLADLPDGGVPFNRPN 89 (246)
T ss_dssp EEEEEETTTTE-------EE-EEESS-S-EEEEEEECTTS--EEEEEETTC-EEEEETTTTEEEEEEEEETTCSCTEEEE
T ss_pred EEEEEECCCCe-------EE-EEecC-C-CceEEEEccCC--EEEEEEcCc-eEEEecCCCcEEEEeeccCCCcccCCCc
Confidence 57777776652 11 11111 1 6677777 664 455555544 55569988864433332 345688
Q ss_pred EEEEcCCCCEEEEEeCC--------CeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeC
Q psy14130 224 CLSFNRDGSRLVTTCKD--------KTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDE 295 (494)
Q Consensus 224 ~l~~~~~~~~l~s~~~d--------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~ 295 (494)
.+++.++|++.++.... +.|..++.. ++....... -.. ...++|++++..++++- +..+.|..+++
T Consensus 90 D~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~~-~~~-pNGi~~s~dg~~lyv~d---s~~~~i~~~~~ 163 (246)
T PF08450_consen 90 DVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVADG-LGF-PNGIAFSPDGKTLYVAD---SFNGRIWRFDL 163 (246)
T ss_dssp EEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEEE-ESS-EEEEEEETTSSEEEEEE---TTTTEEEEEEE
T ss_pred eEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEecC-ccc-ccceEECCcchheeecc---cccceeEEEec
Confidence 99999999988776654 568888887 554333332 222 68999999977788877 78889999998
Q ss_pred CCCCC-c---eeEeeecCC-CceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEe-cCC
Q psy14130 296 NDLNT-P---LALETVDSS-SGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFM-PKR 368 (494)
Q Consensus 296 ~~~~~-~---~~~~~~~~~-~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~-p~~ 368 (494)
..... . ..+...... ...-.++++.+|+.. ++....+.|.+++.+ |+.+..+... ...+++++|. |+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~-va~~~~~~I~~~~p~-G~~~~~i~~p---~~~~t~~~fgg~~~ 237 (246)
T PF08450_consen 164 DADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLW-VADWGGGRIVVFDPD-GKLLREIELP---VPRPTNCAFGGPDG 237 (246)
T ss_dssp ETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EE-EEEETTTEEEEEETT-SCEEEEEE-S---SSSEEEEEEESTTS
T ss_pred cccccceeeeeeEEEcCCCCcCCCcceEcCCCCEE-EEEcCCCEEEEECCC-ccEEEEEcCC---CCCEEEEEEECCCC
Confidence 64333 1 112222222 236679999999766 777788999999987 6653333211 2468999995 453
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=98.51 E-value=8e-05 Score=73.96 Aligned_cols=152 Identities=14% Similarity=0.133 Sum_probs=107.1
Q ss_pred EcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEe-------------------------
Q psy14130 184 WHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTC------------------------- 238 (494)
Q Consensus 184 ~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~------------------------- 238 (494)
+.|+|..+..+.-..+.+.+.|..+.+...++.- .+....++++++|+++++++
T Consensus 200 lpnDGk~l~~~~ey~~~vSvID~etmeV~~qV~V-dgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfni 278 (635)
T PRK02888 200 LPNDGKDLDDPKKYRSLFTAVDAETMEVAWQVMV-DGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFNI 278 (635)
T ss_pred cCCCCCEeecccceeEEEEEEECccceEEEEEEe-CCCcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEch
Confidence 5667732334444567788889888777666552 23456678888888887775
Q ss_pred ---------------CCCeEEEEeCCC-----CceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCC
Q psy14130 239 ---------------KDKTVRVLDPRT-----GLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDL 298 (494)
Q Consensus 239 ---------------~d~~v~iwd~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~ 298 (494)
.+++|.+.|.++ .+.+..+..... ...+.++|++.+++++| ..+.+|.|.|+.+.
T Consensus 279 ~~iea~vkdGK~~~V~gn~V~VID~~t~~~~~~~v~~yIPVGKs--PHGV~vSPDGkylyVan---klS~tVSVIDv~k~ 353 (635)
T PRK02888 279 ARIEEAVKAGKFKTIGGSKVPVVDGRKAANAGSALTRYVPVPKN--PHGVNTSPDGKYFIANG---KLSPTVTVIDVRKL 353 (635)
T ss_pred HHHHHhhhCCCEEEECCCEEEEEECCccccCCcceEEEEECCCC--ccceEECCCCCEEEEeC---CCCCcEEEEEChhh
Confidence 235588888887 344555544333 68899999999999999 78999999999875
Q ss_pred CCc---------eeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeC
Q psy14130 299 NTP---------LALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTN 342 (494)
Q Consensus 299 ~~~---------~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~ 342 (494)
... ..........+.+..+|+++|. .|.+-..|..|..|++..
T Consensus 354 k~~~~~~~~~~~~vvaevevGlGPLHTaFDg~G~-aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 354 DDLFDGKIKPRDAVVAEPELGLGPLHTAFDGRGN-AYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred hhhhhccCCccceEEEeeccCCCcceEEECCCCC-EEEeEeecceeEEEehHH
Confidence 431 1122233345667789999987 458889999999999986
|
|
| >KOG0882|consensus | Back alignment and domain information |
|---|
Probab=98.49 E-value=1.6e-06 Score=80.30 Aligned_cols=207 Identities=15% Similarity=0.074 Sum_probs=145.8
Q ss_pred ccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCC--C-eEEEEecCCCCceEEEEEcCCCCEEEEEeC-CCeEEEEeCCC
Q psy14130 175 HKRRVGYIEWHPTAENVVASAGFDYLIILWDVGK--G-EALTVIDCHPDVINCLSFNRDGSRLVTTCK-DKTVRVLDPRT 250 (494)
Q Consensus 175 h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~--~-~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~-d~~v~iwd~~~ 250 (494)
|...|+.+..... .++.+++.||.++.|--.. + +-+..+..|...|.+++.+.+|.++.|.+. |..++++|+.+
T Consensus 8 hrd~i~hv~~tka--~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn 85 (558)
T KOG0882|consen 8 HRDVITHVFPTKA--KFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVEN 85 (558)
T ss_pred ccceeeeEeeehh--heEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeec
Confidence 8888888876655 5999999999999998643 2 234456678999999999999999999887 99999999987
Q ss_pred CceEEEeeecCCCCceEEEEECCCC-eEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEE
Q psy14130 251 GLVISQGVCHPGTRSSKAVFIGDTG-RIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAG 329 (494)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g 329 (494)
-..+..++...-+....+..++.+. .+++++- -.++.+.++|-+....+.....--|.++|..+.+.+-+... ++.
T Consensus 86 ~DminmiKL~~lPg~a~wv~skGd~~s~IAVs~--~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~-vSi 162 (558)
T KOG0882|consen 86 FDMINMIKLVDLPGFAEWVTSKGDKISLIAVSL--FKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSA-VSI 162 (558)
T ss_pred cchhhhcccccCCCceEEecCCCCeeeeEEeec--ccCCCcEEECCcCCcCccceecccccCceEEEEeeccccce-eec
Confidence 6654333332222122222222211 2334331 47899999998865555555444577899999999999888 888
Q ss_pred eCCCcEEEEEeeC------CCce-----EEec-ccccCCCCeeEEEEecCCceeee--ccceeEEEEeeCC
Q psy14130 330 KGDGNIRYYELTN------ERPY-----IHFL-NQSLSGAPQRGLGFMPKRGCDVT--QCEIFRFFKLHTT 386 (494)
Q Consensus 330 ~~dg~i~~wd~~~------~~~~-----~~~~-~~~~~~~~v~~~~~~p~~~~~~~--~~~~~~~~~l~~~ 386 (494)
...|-|..|.... .+.. ...+ ...+......++.|+|++..+.. .|..+|++.+.++
T Consensus 163 D~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtG 233 (558)
T KOG0882|consen 163 DISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTG 233 (558)
T ss_pred cccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCcccEEEEEEeccc
Confidence 8889999998873 1100 0111 11233466789999999987765 4888999988874
|
|
| >KOG1912|consensus | Back alignment and domain information |
|---|
Probab=98.47 E-value=3.9e-05 Score=75.98 Aligned_cols=233 Identities=15% Similarity=0.038 Sum_probs=151.4
Q ss_pred cCCcEEEEEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCC-----------CCEEEEEeCCCeEEEEEC
Q psy14130 138 AGGGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTA-----------ENVVASAGFDYLIILWDV 206 (494)
Q Consensus 138 ~~~g~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~-----------~~~l~s~s~d~~v~iwd~ 206 (494)
+.+|.++....+.|.+-|..+- +.++.+.-|...|+.+.|.|.. .-+||++...|.|.+||.
T Consensus 24 ~~~GLiAygshslV~VVDs~s~-------q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~ 96 (1062)
T KOG1912|consen 24 SPSGLIAYGSHSLVSVVDSRSL-------QLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDF 96 (1062)
T ss_pred CccceEEEecCceEEEEehhhh-------hhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEe
Confidence 3445555555567888888777 5667777899999999997642 235788888899999999
Q ss_pred CCCeEEEEecCCCCceEEEEEcC---CC-CEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEe
Q psy14130 207 GKGEALTVIDCHPDVINCLSFNR---DG-SRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGF 282 (494)
Q Consensus 207 ~~~~~~~~~~~h~~~v~~l~~~~---~~-~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 282 (494)
..+..+..++.|.+++..++|-+ +. ..|+.-....++.+|+..+|+........... ..++.+.|-+.+.++.-
T Consensus 97 ~~~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~i-Ls~f~~DPfd~rh~~~l- 174 (1062)
T KOG1912|consen 97 VLASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHEI-LSCFRVDPFDSRHFCVL- 174 (1062)
T ss_pred hhhhhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccCCcc-eeeeeeCCCCcceEEEE-
Confidence 99998999999999999999987 33 46777777889999999999977666544433 45566666555444443
Q ss_pred cCCCCceEEEEeCCCCCCc---eeEee--ecCCC-------------------c------eEEeEEeCCCCEEEEEEeCC
Q psy14130 283 SRHSDRQVGLWDENDLNTP---LALET--VDSSS-------------------G------VLFPYYDHDTRILFLAGKGD 332 (494)
Q Consensus 283 ~~~~d~~i~iwd~~~~~~~---~~~~~--~~~~~-------------------~------v~~~~~~~~~~~l~~~g~~d 332 (494)
+..|.+.+-+.-....+ ..... .++.. . ...++|+|.-+.+ +-...-
T Consensus 175 --~s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~-lfi~~p 251 (1062)
T KOG1912|consen 175 --GSKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNI-LFITFP 251 (1062)
T ss_pred --ccCceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhce-EEEEec
Confidence 35666666654321111 00000 01100 0 1235678876655 233467
Q ss_pred CcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCc----eeeeccceeEEEEeeC
Q psy14130 333 GNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRG----CDVTQCEIFRFFKLHT 385 (494)
Q Consensus 333 g~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~----~~~~~~~~~~~~~l~~ 385 (494)
..+.++|++-..++....-+ .+.+.-+.+.|+.. +.+-.+|.+.+|.-..
T Consensus 252 rellv~dle~~~~l~vvpie---r~~akfv~vlP~~~rd~LfclH~nG~ltirvrk~ 305 (1062)
T KOG1912|consen 252 RELLVFDLEYECCLAVVPIE---RGGAKFVDVLPDPRRDALFCLHSNGRLTIRVRKE 305 (1062)
T ss_pred cceEEEcchhhceeEEEEec---cCCcceeEeccCCCcceEEEEecCCeEEEEEeec
Confidence 78999999887764332211 23355667777543 2333588888886543
|
|
| >KOG3914|consensus | Back alignment and domain information |
|---|
Probab=98.44 E-value=4.9e-06 Score=76.12 Aligned_cols=157 Identities=10% Similarity=0.066 Sum_probs=104.4
Q ss_pred EEEEEcCCCCEEEEEeCCCeEEEEeCCCCc----eEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCC
Q psy14130 223 NCLSFNRDGSRLVTTCKDKTVRVLDPRTGL----VISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDL 298 (494)
Q Consensus 223 ~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~ 298 (494)
..+..+++++++|.+..++...+++.+... ++........ ...+.+..+....+.+- ..++...+.+|....+
T Consensus 66 ~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v~~~--~~ai~~~~~~~sv~v~d-kagD~~~~di~s~~~~ 142 (390)
T KOG3914|consen 66 ALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSCVPKR--PTAISFIREDTSVLVAD-KAGDVYSFDILSADSG 142 (390)
T ss_pred cccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEeecccC--cceeeeeeccceEEEEe-ecCCceeeeeeccccc
Confidence 345567788888888888887777766443 2333333222 45566666544444432 1134555666665542
Q ss_pred CCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCcee-eeccce
Q psy14130 299 NTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCD-VTQCEI 377 (494)
Q Consensus 299 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~-~~~~~~ 377 (494)
.. ...++|..-++.++++||++++ +++..|..|++-.......+..+..+ |..-|..++..++..++ .++|++
T Consensus 143 ~~---~~~lGhvSml~dVavS~D~~~I-itaDRDEkIRvs~ypa~f~IesfclG--H~eFVS~isl~~~~~LlS~sGD~t 216 (390)
T KOG3914|consen 143 RC---EPILGHVSMLLDVAVSPDDQFI-ITADRDEKIRVSRYPATFVIESFCLG--HKEFVSTISLTDNYLLLSGSGDKT 216 (390)
T ss_pred Cc---chhhhhhhhhheeeecCCCCEE-EEecCCceEEEEecCcccchhhhccc--cHhheeeeeeccCceeeecCCCCc
Confidence 22 3345677889999999999999 99999999999888765544344333 35679999999987733 446999
Q ss_pred eEEEEeeCCCC
Q psy14130 378 FRFFKLHTTRN 388 (494)
Q Consensus 378 ~~~~~l~~~~~ 388 (494)
+|+|++..++.
T Consensus 217 lr~Wd~~sgk~ 227 (390)
T KOG3914|consen 217 LRLWDITSGKL 227 (390)
T ss_pred EEEEecccCCc
Confidence 99999998653
|
|
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=98.41 E-value=0.00078 Score=65.68 Aligned_cols=175 Identities=15% Similarity=0.096 Sum_probs=102.2
Q ss_pred EEEEEeCCCeEEEEECCCCeEEEEecCC-CC---c---eEEEEEcC--CCCEEEEEeCCCeEEEEeCCCCceEEEeeecC
Q psy14130 191 VVASAGFDYLIILWDVGKGEALTVIDCH-PD---V---INCLSFNR--DGSRLVTTCKDKTVRVLDPRTGLVISQGVCHP 261 (494)
Q Consensus 191 ~l~s~s~d~~v~iwd~~~~~~~~~~~~h-~~---~---v~~l~~~~--~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~ 261 (494)
.++.+..++.+..+|+++|+.+...... .. . ...+.-+| .+..++.++.++.+..||.++|+.+.......
T Consensus 192 ~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~tG~~~W~~~~~~ 271 (377)
T TIGR03300 192 GVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVAALDLRSGRVLWKRDASS 271 (377)
T ss_pred EEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEEECCEEEEEEcCCEEEEEECCCCcEEEeeccCC
Confidence 6777888899999999999876543311 00 0 00011111 35578888899999999999998776554211
Q ss_pred CCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEee
Q psy14130 262 GTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELT 341 (494)
Q Consensus 262 ~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~ 341 (494)
...... .++.+++.. .+|.+..+|..+++..-....... .....+.. .+..+ ++++.+|.|+++|..
T Consensus 272 ---~~~p~~--~~~~vyv~~----~~G~l~~~d~~tG~~~W~~~~~~~-~~~ssp~i--~g~~l-~~~~~~G~l~~~d~~ 338 (377)
T TIGR03300 272 ---YQGPAV--DDNRLYVTD----ADGVVVALDRRSGSELWKNDELKY-RQLTAPAV--VGGYL-VVGDFEGYLHWLSRE 338 (377)
T ss_pred ---ccCceE--eCCEEEEEC----CCCeEEEEECCCCcEEEccccccC-CccccCEE--ECCEE-EEEeCCCEEEEEECC
Confidence 122222 235666554 799999999987654322211111 11222222 35566 667899999999999
Q ss_pred CCCceEEecccccCCCC-eeEEEEecCCceeeeccceeEEE
Q psy14130 342 NERPYIHFLNQSLSGAP-QRGLGFMPKRGCDVTQCEIFRFF 381 (494)
Q Consensus 342 ~~~~~~~~~~~~~~~~~-v~~~~~~p~~~~~~~~~~~~~~~ 381 (494)
+++.+.+.-.. ..+ ..+.++..++.++.+.++.+..|
T Consensus 339 tG~~~~~~~~~---~~~~~~sp~~~~~~l~v~~~dG~l~~~ 376 (377)
T TIGR03300 339 DGSFVARLKTD---GSGIASPPVVVGDGLLVQTRDGDLYAF 376 (377)
T ss_pred CCCEEEEEEcC---CCccccCCEEECCEEEEEeCCceEEEe
Confidence 99865433211 112 22233444444444456666544
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats | Back alignment and domain information |
|---|
Probab=98.40 E-value=0.00013 Score=70.73 Aligned_cols=97 Identities=14% Similarity=0.159 Sum_probs=73.6
Q ss_pred EEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCC
Q psy14130 151 VKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRD 230 (494)
Q Consensus 151 v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~ 230 (494)
-++|++..+++.. ..+.. -.....|.|++++|+. ..|+.|..||+|.+||...+... +....-.++.++|+|+
T Consensus 238 ~ciYE~~r~klqr---vsvts-ipL~s~v~~ca~sp~E-~kLvlGC~DgSiiLyD~~~~~t~--~~ka~~~P~~iaWHp~ 310 (545)
T PF11768_consen 238 SCIYECSRNKLQR---VSVTS-IPLPSQVICCARSPSE-DKLVLGCEDGSIILYDTTRGVTL--LAKAEFIPTLIAWHPD 310 (545)
T ss_pred EEEEEeecCceeE---EEEEE-EecCCcceEEecCccc-ceEEEEecCCeEEEEEcCCCeee--eeeecccceEEEEcCC
Confidence 5677776553321 11112 2477889999999997 69999999999999998776432 2235566889999999
Q ss_pred CCEEEEEeCCCeEEEEeCCCCceE
Q psy14130 231 GSRLVTTCKDKTVRVLDPRTGLVI 254 (494)
Q Consensus 231 ~~~l~s~~~d~~v~iwd~~~~~~~ 254 (494)
|..+++|+..|.+.+||+.-+...
T Consensus 311 gai~~V~s~qGelQ~FD~ALspi~ 334 (545)
T PF11768_consen 311 GAIFVVGSEQGELQCFDMALSPIK 334 (545)
T ss_pred CcEEEEEcCCceEEEEEeecCccc
Confidence 999999999999999998765533
|
|
| >KOG2041|consensus | Back alignment and domain information |
|---|
Probab=98.35 E-value=1.8e-06 Score=84.23 Aligned_cols=160 Identities=14% Similarity=0.172 Sum_probs=115.9
Q ss_pred ccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe---------------EEEEecCCCCceEEEEEcCCCCEEEEEeC
Q psy14130 175 HKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE---------------ALTVIDCHPDVINCLSFNRDGSRLVTTCK 239 (494)
Q Consensus 175 h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~---------------~~~~~~~h~~~v~~l~~~~~~~~l~s~~~ 239 (494)
......|++|+... .++|.|+.||.+++..+.+.. .-+++.||.+.|.-+.|+.+.+.|-|+..
T Consensus 13 nnvkL~c~~WNke~-gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt 91 (1189)
T KOG2041|consen 13 NNVKLHCAEWNKES-GYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDT 91 (1189)
T ss_pred CCceEEEEEEcccC-CeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCC
Confidence 33557899999987 699999999999999886432 12467899999999999999999999999
Q ss_pred CCeEEEEeCCCCceEEEe-eecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEE
Q psy14130 240 DKTVRVLDPRTGLVISQG-VCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYY 318 (494)
Q Consensus 240 d~~v~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 318 (494)
+|.|.+|-+-.|.-..++ .......+.++.|..+|.++..+= .||.|.+=.+...+. .. ..+ .......+.|
T Consensus 92 ~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvY----eDGavIVGsvdGNRI-wg-KeL-kg~~l~hv~w 164 (1189)
T KOG2041|consen 92 SGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVY----EDGAVIVGSVDGNRI-WG-KEL-KGQLLAHVLW 164 (1189)
T ss_pred CceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEE----ccCCEEEEeecccee-cc-hhc-chheccceee
Confidence 999999998887733332 233344478899999976665553 777776655543211 00 000 0112336789
Q ss_pred eCCCCEEEEEEeCCCcEEEEEeeCC
Q psy14130 319 DHDTRILFLAGKGDGNIRYYELTNE 343 (494)
Q Consensus 319 ~~~~~~l~~~g~~dg~i~~wd~~~~ 343 (494)
++|.+.+ +.+...|.+++||.+..
T Consensus 165 s~D~~~~-Lf~~ange~hlydnqgn 188 (1189)
T KOG2041|consen 165 SEDLEQA-LFKKANGETHLYDNQGN 188 (1189)
T ss_pred cccHHHH-HhhhcCCcEEEeccccc
Confidence 9999888 77788899999997643
|
|
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.33 E-value=0.00033 Score=66.36 Aligned_cols=180 Identities=14% Similarity=0.199 Sum_probs=115.5
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCC---------------eEEEEECCCCeEEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDY---------------LIILWDVGKGEALTV 214 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~---------------~v~iwd~~~~~~~~~ 214 (494)
.|.+|..+.. ..+..+. | ..|..+.|+|.+ ++|.+-+..+ .+.+||+.+|..+..
T Consensus 54 ~V~~~~g~~~-------~~l~~~~-~-~~V~~~~fSP~~-kYL~tw~~~pi~~pe~e~sp~~~~n~~~vwd~~sg~iv~s 123 (561)
T COG5354 54 GVECWGGPSK-------AKLVRFR-H-PDVKYLDFSPNE-KYLVTWSREPIIEPEIEISPFTSKNNVFVWDIASGMIVFS 123 (561)
T ss_pred ceEEccccch-------hheeeee-c-CCceecccCccc-ceeeeeccCCccChhhccCCccccCceeEEeccCceeEee
Confidence 4999998776 3333333 3 458999999998 7999987644 389999988776544
Q ss_pred ecCCC---------------------------------------------CceEEEEEcCCC--CEEEE-----EeCCCe
Q psy14130 215 IDCHP---------------------------------------------DVINCLSFNRDG--SRLVT-----TCKDKT 242 (494)
Q Consensus 215 ~~~h~---------------------------------------------~~v~~l~~~~~~--~~l~s-----~~~d~~ 242 (494)
+.... ..|....|+|.| ..|+. ...+++
T Consensus 124 f~~~~q~~~~Wp~~k~s~~D~y~ARvv~~sl~i~e~t~n~~~~p~~~lr~~gi~dFsisP~~n~~~la~~tPEk~~kpa~ 203 (561)
T COG5354 124 FNGISQPYLGWPVLKFSIDDKYVARVVGSSLYIHEITDNIEEHPFKNLRPVGILDFSISPEGNHDELAYWTPEKLNKPAM 203 (561)
T ss_pred ccccCCcccccceeeeeecchhhhhhccCeEEEEecCCccccCchhhccccceeeEEecCCCCCceEEEEccccCCCCcE
Confidence 43211 235556666642 23342 345677
Q ss_pred EEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEec-----CC--CCceEEEEeCCCCCCceeEeeecCCCceEE
Q psy14130 243 VRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFS-----RH--SDRQVGLWDENDLNTPLALETVDSSSGVLF 315 (494)
Q Consensus 243 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~-----~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~ 315 (494)
+++|.+..++.+.+-..-.-. -..+.|.+.+..+++-.-. ++ .+..+.|++++....+... +....|..
T Consensus 204 ~~i~sIp~~s~l~tk~lfk~~-~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~i~V~~---~~~~pVhd 279 (561)
T COG5354 204 VRILSIPKNSVLVTKNLFKVS-GVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERSIPVEK---DLKDPVHD 279 (561)
T ss_pred EEEEEccCCCeeeeeeeEeec-ccEEEEecCCceEEEEEEEeeecccceeccceEEEEeecccccceec---ccccccee
Confidence 888888766654443322222 4677888887766554310 01 2467889998854444332 44578999
Q ss_pred eEEeCCCCEEEE-EEeCCCcEEEEEeeCC
Q psy14130 316 PYYDHDTRILFL-AGKGDGNIRYYELTNE 343 (494)
Q Consensus 316 ~~~~~~~~~l~~-~g~~dg~i~~wd~~~~ 343 (494)
.+|.|.++.+.+ +|-.+..+.++|++..
T Consensus 280 f~W~p~S~~F~vi~g~~pa~~s~~~lr~N 308 (561)
T COG5354 280 FTWEPLSSRFAVISGYMPASVSVFDLRGN 308 (561)
T ss_pred eeecccCCceeEEecccccceeecccccc
Confidence 999999877633 3467888888888775
|
|
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=98.31 E-value=0.0003 Score=64.00 Aligned_cols=205 Identities=14% Similarity=0.007 Sum_probs=129.1
Q ss_pred EEEEEEcCCCCCEEEEEeCCC-eEEEEECCCCeEEEEecCCCCceE--EEEEcCCCCEEEEEeC-----CCeEEEEeCC-
Q psy14130 179 VGYIEWHPTAENVVASAGFDY-LIILWDVGKGEALTVIDCHPDVIN--CLSFNRDGSRLVTTCK-----DKTVRVLDPR- 249 (494)
Q Consensus 179 V~~~~~~p~~~~~l~s~s~d~-~v~iwd~~~~~~~~~~~~h~~~v~--~l~~~~~~~~l~s~~~-----d~~v~iwd~~- 249 (494)
...++.+|.....++.+-.-| ...+||..+++....+....+.-. .-.|++||++|++.-. .|.|-|||..
T Consensus 7 gH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~ 86 (305)
T PF07433_consen 7 GHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAAR 86 (305)
T ss_pred ccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcC
Confidence 346788996656778777766 478999999998887765444332 3679999999998754 4889999999
Q ss_pred CCceEEEeeecCCCCceEEEEECCCCeEEEEEec--------------CCCCceEEEEeCCCCCCceeEee--ecCCCce
Q psy14130 250 TGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFS--------------RHSDRQVGLWDENDLNTPLALET--VDSSSGV 313 (494)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~--------------~~~d~~i~iwd~~~~~~~~~~~~--~~~~~~v 313 (494)
+-+.+.++..|.-. ...+.+.|++..|+++-.. ...+-.+...|.+++........ -.+...+
T Consensus 87 ~~~ri~E~~s~GIG-PHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSi 165 (305)
T PF07433_consen 87 GYRRIGEFPSHGIG-PHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSI 165 (305)
T ss_pred CcEEEeEecCCCcC-hhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCccccccce
Confidence 55678888877655 7888999996555544210 01233444445554433222111 2345678
Q ss_pred EEeEEeCCCCEEEEEEeCCCc-----EEEEEeeCCCceEEecc----cccCCCCeeEEEEecCCceeee-c--cceeEEE
Q psy14130 314 LFPYYDHDTRILFLAGKGDGN-----IRYYELTNERPYIHFLN----QSLSGAPQRGLGFMPKRGCDVT-Q--CEIFRFF 381 (494)
Q Consensus 314 ~~~~~~~~~~~l~~~g~~dg~-----i~~wd~~~~~~~~~~~~----~~~~~~~v~~~~~~p~~~~~~~-~--~~~~~~~ 381 (494)
..++++++|..+++ .-..|. =-+.-.+.++.+..+-. ...-..-+-+|++++++..++. + .+.+-+|
T Consensus 166 RHLa~~~~G~V~~a-~Q~qg~~~~~~PLva~~~~g~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~ 244 (305)
T PF07433_consen 166 RHLAVDGDGTVAFA-MQYQGDPGDAPPLVALHRRGGALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRGGRVAVW 244 (305)
T ss_pred eeEEecCCCcEEEE-EecCCCCCccCCeEEEEcCCCcceeccCChHHHHhhCCceEEEEEeCCCCEEEEECCCCCEEEEE
Confidence 89999999877733 222221 11222223332111110 0112356889999999876644 3 8889999
Q ss_pred EeeC
Q psy14130 382 KLHT 385 (494)
Q Consensus 382 ~l~~ 385 (494)
+..+
T Consensus 245 d~~t 248 (305)
T PF07433_consen 245 DAAT 248 (305)
T ss_pred ECCC
Confidence 8877
|
|
| >KOG4714|consensus | Back alignment and domain information |
|---|
Probab=98.31 E-value=3.2e-06 Score=72.84 Aligned_cols=168 Identities=14% Similarity=0.105 Sum_probs=104.4
Q ss_pred ceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeE-EEEecCCCCceEEEEEcCCCCEEEEEeC-----CC
Q psy14130 168 WIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEA-LTVIDCHPDVINCLSFNRDGSRLVTTCK-----DK 241 (494)
Q Consensus 168 ~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~-~~~~~~h~~~v~~l~~~~~~~~l~s~~~-----d~ 241 (494)
+...+.-|+++-.+-+.+-.+ +-++++..||.+.+.+.+.-.. ...+..-...-.+.+....+..+.++.- -+
T Consensus 81 ~~~~~a~~sep~p~~~~s~~~-t~V~~~~~dg~~~v~s~~~~~~~~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d 159 (319)
T KOG4714|consen 81 PFKVLAKNSEIDPNDACTMTD-NRVCIGYADGSLAVFSTDKDLALMSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQD 159 (319)
T ss_pred ceeeeeccCCCCCcccccccC-CceEecCCCceEEEEechHHHhhhhhcccccccccccceeecccEEecCCcceEeecc
Confidence 344444455544444444444 6799999999999999765211 1111111111122233334555544331 23
Q ss_pred eEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCC
Q psy14130 242 TVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHD 321 (494)
Q Consensus 242 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 321 (494)
..+.|+++..+.+..-...... +..++-+|....++++| +.||.+-+||.|+...|..+. ..|...+..+.|+|.
T Consensus 160 ~~~a~~~~p~~t~~~~~~~~~~-v~~l~~hp~qq~~v~cg---t~dg~~~l~d~rn~~~p~S~l-~ahk~~i~eV~FHpk 234 (319)
T KOG4714|consen 160 NFYANTLDPIKTLIPSKKALDA-VTALCSHPAQQHLVCCG---TDDGIVGLWDARNVAMPVSLL-KAHKAEIWEVHFHPK 234 (319)
T ss_pred ceeeeccccccccccccccccc-chhhhCCcccccEEEEe---cCCCeEEEEEcccccchHHHH-HHhhhhhhheeccCC
Confidence 5667776654422222212222 77788888888999999 899999999999876555443 246678899999995
Q ss_pred C-CEEEEEEeCCCcEEEEEeeC
Q psy14130 322 T-RILFLAGKGDGNIRYYELTN 342 (494)
Q Consensus 322 ~-~~l~~~g~~dg~i~~wd~~~ 342 (494)
. ..| .++++||.+.-||..+
T Consensus 235 ~p~~L-ft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 235 NPEHL-FTCSEDGSLWHWDAST 255 (319)
T ss_pred Cchhe-eEecCCCcEEEEcCCC
Confidence 4 556 7889999999999875
|
|
| >KOG1008|consensus | Back alignment and domain information |
|---|
Probab=98.31 E-value=2.6e-07 Score=89.03 Aligned_cols=234 Identities=16% Similarity=0.213 Sum_probs=146.1
Q ss_pred ecccccccEEEEEEcCCCCCEEEEEe----CCCeEEEEECCCC--eEEE--EecC-CCCceEEEEEcCCCCEEEEEeCCC
Q psy14130 171 DLHGHKRRVGYIEWHPTAENVVASAG----FDYLIILWDVGKG--EALT--VIDC-HPDVINCLSFNRDGSRLVTTCKDK 241 (494)
Q Consensus 171 ~~~~h~~~V~~~~~~p~~~~~l~s~s----~d~~v~iwd~~~~--~~~~--~~~~-h~~~v~~l~~~~~~~~l~s~~~d~ 241 (494)
...+|....++++|++-..+.||.|- .|..+.|||+.++ .+.. .|.+ ......+++|..+.+++++|...+
T Consensus 97 ~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr 176 (783)
T KOG1008|consen 97 VTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSR 176 (783)
T ss_pred ecccccccccccccccccHHHHHhhhhhhcccCCccceecccccCCCccccccccccccCccccccccCcchhhcccccc
Confidence 45578899999999998667888874 3668999999876 2221 2222 445566899999999999999999
Q ss_pred eEEEEeCCCCc-eEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEe-CCCCCCceeEeeec---CCCceEEe
Q psy14130 242 TVRVLDPRTGL-VISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWD-ENDLNTPLALETVD---SSSGVLFP 316 (494)
Q Consensus 242 ~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd-~~~~~~~~~~~~~~---~~~~v~~~ 316 (494)
.++++|+|... ....+. +.. +..+...|-....++.- .|+.|.+|| .++.+.++...... ....+..+
T Consensus 177 ~~~ifdlRqs~~~~~svn--Tk~-vqG~tVdp~~~nY~cs~----~dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~ 249 (783)
T KOG1008|consen 177 SVHIFDLRQSLDSVSSVN--TKY-VQGITVDPFSPNYFCSN----SDGDIAIWDTYRNIENPLQIILRNENKKPKQLFAL 249 (783)
T ss_pred hhhhhhhhhhhhhhhhhh--hhh-cccceecCCCCCceecc----ccCceeeccchhhhccHHHHHhhCCCCcccceeeE
Confidence 99999998432 222221 111 33444555334566665 599999999 66666554432211 11348889
Q ss_pred EEeCCCCEEEEEEeC-CCcEEEEEeeCC--------CceEEeccc--ccCC---CCeeEEEEecCC----ceeeecccee
Q psy14130 317 YYDHDTRILFLAGKG-DGNIRYYELTNE--------RPYIHFLNQ--SLSG---APQRGLGFMPKR----GCDVTQCEIF 378 (494)
Q Consensus 317 ~~~~~~~~l~~~g~~-dg~i~~wd~~~~--------~~~~~~~~~--~~~~---~~v~~~~~~p~~----~~~~~~~~~~ 378 (494)
+|+|...-++++... .++|++||+..- ......... +++. ..|..++|++.. ..++.-....
T Consensus 250 aycPtrtglla~l~RdS~tIrlydi~~v~t~~s~nn~~~~~~~s~~~~q~~~~~s~I~~f~wH~~s~~er~il~~~nl~~ 329 (783)
T KOG1008|consen 250 AYCPTRTGLLAVLSRDSITIRLYDICVVGTEGSANNSVFVNYESKYPVQPNSQCSGIDFFTWHTASPTERQILGVINLQP 329 (783)
T ss_pred EeccCCcchhhhhccCcceEEEecccccCCcccccccceeeecccccccccccccceeecCcCcCCccceeEEeeccCCh
Confidence 999987666566554 467999998631 111111111 2222 456777777754 2344446666
Q ss_pred EEEEeeCCCCeEEEeEEEeeCCC--CCCCCCCCCCCCCC
Q psy14130 379 RFFKLHTTRNMCEPISMIVPRKS--DQFQDDLYPDTAAP 415 (494)
Q Consensus 379 ~~~~l~~~~~~~~~~~~~~pr~~--~~~~~~~~~~~~~~ 415 (494)
.-+++.. .+-|..+. |+.. -.|+..+|+....+
T Consensus 330 ~Df~V~e---~~~pa~s~-p~n~L~~s~~r~ly~~~S~~ 364 (783)
T KOG1008|consen 330 KDFSVHE---EVIPASSN-PYNDLIFSFKRKLYPLNSSP 364 (783)
T ss_pred hhccchh---heecccCC-CcccchhhhcccccCCCCCc
Confidence 6666665 34444443 6553 34667788876554
|
|
| >KOG3617|consensus | Back alignment and domain information |
|---|
Probab=98.30 E-value=5.4e-05 Score=75.73 Aligned_cols=112 Identities=21% Similarity=0.259 Sum_probs=80.9
Q ss_pred CCeeeeCCc--eEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCC
Q psy14130 121 SHFCAANPK--FVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFD 198 (494)
Q Consensus 121 ~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d 198 (494)
..++.|+|. +++++..+...| +.|.||- ++++.......| -.+++++|||.. -+|+.|-.-
T Consensus 18 sti~SWHPsePlfAVA~fS~er~-------GSVtIfa-dtGEPqr~Vt~P--------~hatSLCWHpe~-~vLa~gwe~ 80 (1416)
T KOG3617|consen 18 STISSWHPSEPLFAVASFSPERG-------GSVTIFA-DTGEPQRDVTYP--------VHATSLCWHPEE-FVLAQGWEM 80 (1416)
T ss_pred ccccccCCCCceeEEEEecCCCC-------ceEEEEe-cCCCCCcccccc--------eehhhhccChHH-HHHhhcccc
Confidence 344455443 455555544332 2577774 455332222222 225679999996 789999999
Q ss_pred CeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCC
Q psy14130 199 YLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPR 249 (494)
Q Consensus 199 ~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~ 249 (494)
|.+.+|...+.+.-.....|..+|..+.|+++|..++|+..-|.|.+|.+.
T Consensus 81 g~~~v~~~~~~e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 81 GVSDVQKTNTTETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred ceeEEEecCCceeeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 999999998777666667799999999999999999999999999999764
|
|
| >KOG2066|consensus | Back alignment and domain information |
|---|
Probab=98.28 E-value=6.5e-05 Score=74.91 Aligned_cols=189 Identities=11% Similarity=0.050 Sum_probs=128.4
Q ss_pred cccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEE
Q psy14130 176 KRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVIS 255 (494)
Q Consensus 176 ~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~ 255 (494)
...++|++++. .+|+-|+.+|.|++.+.. +.+ .+...|... ..+|.+++||+.||+|.|-.+-+++...
T Consensus 39 ~D~is~~av~~---~~~~~GtH~g~v~~~~~~-~~~-~~~~~~s~~------~~~Gey~asCS~DGkv~I~sl~~~~~~~ 107 (846)
T KOG2066|consen 39 NDAISCCAVHD---KFFALGTHRGAVYLTTCQ-GNP-KTNFDHSSS------ILEGEYVASCSDDGKVVIGSLFTDDEIT 107 (846)
T ss_pred hhHHHHHHhhc---ceeeeccccceEEEEecC-Ccc-ccccccccc------ccCCceEEEecCCCcEEEeeccCCccce
Confidence 35567777773 589999999999999975 443 333345544 6689999999999999999999888777
Q ss_pred EeeecCCCCceEEEEECC----CCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeC
Q psy14130 256 QGVCHPGTRSSKAVFIGD----TGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKG 331 (494)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~----~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~ 331 (494)
++..+.. +..++++|+ ..+.+++| +.-| +.++.-+=.............+.|.++.| .|.++ +-+ .
T Consensus 108 ~~df~rp--iksial~Pd~~~~~sk~fv~G---G~ag-lvL~er~wlgnk~~v~l~~~eG~I~~i~W--~g~lI-AWa-n 177 (846)
T KOG2066|consen 108 QYDFKRP--IKSIALHPDFSRQQSKQFVSG---GMAG-LVLSERNWLGNKDSVVLSEGEGPIHSIKW--RGNLI-AWA-N 177 (846)
T ss_pred eEecCCc--ceeEEeccchhhhhhhheeec---Ccce-EEEehhhhhcCccceeeecCccceEEEEe--cCcEE-EEe-c
Confidence 7766554 678888887 23344445 3555 77776432222222333446688999999 46666 555 4
Q ss_pred CCcEEEEEeeCCCceEEecccc---cCCCCeeEEEEecCCceeeeccceeEEEEeeC
Q psy14130 332 DGNIRYYELTNERPYIHFLNQS---LSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 332 dg~i~~wd~~~~~~~~~~~~~~---~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~~ 385 (494)
|--|++||+.+++.+...-... ......-.+.|.++..+++.=..++++..+..
T Consensus 178 d~Gv~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~~LVIGW~d~v~i~~I~~ 234 (846)
T KOG2066|consen 178 DDGVKVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDEDRLVIGWGDSVKICSIKK 234 (846)
T ss_pred CCCcEEEeccccceeeccCCCCCCCCcccCCCceEecCCCeEEEecCCeEEEEEEec
Confidence 5559999999887643222111 11222356889988777777688899998884
|
|
| >PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] | Back alignment and domain information |
|---|
Probab=98.25 E-value=0.0018 Score=58.09 Aligned_cols=198 Identities=12% Similarity=0.122 Sum_probs=114.9
Q ss_pred ecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCC-CCceEEEEEcCCCCEEEEEeCCCeEEEEeCC
Q psy14130 171 DLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCH-PDVINCLSFNRDGSRLVTTCKDKTVRVLDPR 249 (494)
Q Consensus 171 ~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h-~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~ 249 (494)
.+.+-...+..++|+|+...+++.....+.|...+. +|+.+..+.-. .+..-.|++..++.++++.-.++.+.++++.
T Consensus 16 ~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~ 94 (248)
T PF06977_consen 16 PLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTID 94 (248)
T ss_dssp E-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE-
T ss_pred ECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEEe
Confidence 444555669999999987567888888889988887 57777776532 3567889999888877777679999999884
Q ss_pred CCc------eEEEee--ec--CCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCC--CCCceeEe-e--e----cCC
Q psy14130 250 TGL------VISQGV--CH--PGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEND--LNTPLALE-T--V----DSS 310 (494)
Q Consensus 250 ~~~------~~~~~~--~~--~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~--~~~~~~~~-~--~----~~~ 310 (494)
... ....+. .. .+...-.++|.+.+++++++- +..-..+|.+.. ........ . . ...
T Consensus 95 ~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~k----E~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (248)
T PF06977_consen 95 DDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAK----ERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFV 170 (248)
T ss_dssp ---TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEE----ESSSEEEEEEESTT-SS--EEEE-HHHH-HT--S
T ss_pred ccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEe----CCCChhhEEEccccCccceeecccccccccccee
Confidence 321 112221 11 122268899999988888775 455555665543 11111111 0 0 122
Q ss_pred CceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEe-cccc-----cCCCCeeEEEEecCCceeeec
Q psy14130 311 SGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHF-LNQS-----LSGAPQRGLGFMPKRGCDVTQ 374 (494)
Q Consensus 311 ~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~-~~~~-----~~~~~v~~~~~~p~~~~~~~~ 374 (494)
..+..+.++|....|++-+.....|..+| .+|+++..+ +..- ..-.+..+|+|.|+|.+.+++
T Consensus 171 ~d~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIvs 239 (248)
T PF06977_consen 171 RDLSGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIVS 239 (248)
T ss_dssp S---EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEEE
T ss_pred ccccceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEEEc
Confidence 45678899999988888888889999999 566653222 2211 112457899999999877766
|
Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A. |
| >KOG1912|consensus | Back alignment and domain information |
|---|
Probab=98.23 E-value=0.0004 Score=69.18 Aligned_cols=179 Identities=17% Similarity=0.204 Sum_probs=121.2
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCC---CCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPT---AENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLS 226 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~---~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~ 226 (494)
+|.+||...+ ..+..+..|.++|..++|-+. ...+|+.-....++.+|+..+|+.............++.
T Consensus 90 rIil~d~~~~-------s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~iLs~f~ 162 (1062)
T KOG1912|consen 90 RIILVDFVLA-------SVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHEILSCFR 162 (1062)
T ss_pred cEEEEEehhh-------hhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccCCcceeeee
Confidence 6999999887 455567778899999998553 224666666678999999999999888776666777899
Q ss_pred EcC-CCCEEEEEeCCCeEEEEeCCC-------CceEEEeeecCC----------------C--------CceEEEEECCC
Q psy14130 227 FNR-DGSRLVTTCKDKTVRVLDPRT-------GLVISQGVCHPG----------------T--------RSSKAVFIGDT 274 (494)
Q Consensus 227 ~~~-~~~~l~s~~~d~~v~iwd~~~-------~~~~~~~~~~~~----------------~--------~~~~~~~~~~~ 274 (494)
+.| |.+.+..-+..|.+.+-+.-. |+..+.-..|.. . .....+|+|.-
T Consensus 163 ~DPfd~rh~~~l~s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~ 242 (1062)
T KOG1912|consen 163 VDPFDSRHFCVLGSKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHW 242 (1062)
T ss_pred eCCCCcceEEEEccCceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhh
Confidence 999 777777777777777765421 122222222221 0 02235567776
Q ss_pred CeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCC--CEEEEEEeCCCcEEEEEeeC
Q psy14130 275 GRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDT--RILFLAGKGDGNIRYYELTN 342 (494)
Q Consensus 275 ~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~g~~dg~i~~wd~~~ 342 (494)
.+++...| .+.+.++|++-.. .+....+ ..+++..+.+-|+. ..| .++-.||.+.+|--+.
T Consensus 243 rn~lfi~~----prellv~dle~~~-~l~vvpi-er~~akfv~vlP~~~rd~L-fclH~nG~ltirvrk~ 305 (1062)
T KOG1912|consen 243 RNILFITF----PRELLVFDLEYEC-CLAVVPI-ERGGAKFVDVLPDPRRDAL-FCLHSNGRLTIRVRKE 305 (1062)
T ss_pred hceEEEEe----ccceEEEcchhhc-eeEEEEe-ccCCcceeEeccCCCcceE-EEEecCCeEEEEEeec
Confidence 67777774 7889999988533 3333333 23455566666654 455 7888999999997665
|
|
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=98.22 E-value=0.00025 Score=64.15 Aligned_cols=145 Identities=22% Similarity=0.235 Sum_probs=92.7
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEEe-cCCC---CceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCc
Q psy14130 190 NVVASAGFDYLIILWDVGKGEALTVI-DCHP---DVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRS 265 (494)
Q Consensus 190 ~~l~s~s~d~~v~iwd~~~~~~~~~~-~~h~---~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~ 265 (494)
..++.++.|+.++.+|..+|+.+... .... ..........++..++.+..++.|..+|+++|+.+...........
T Consensus 77 ~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~ 156 (238)
T PF13360_consen 77 GRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGS 156 (238)
T ss_dssp TEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS
T ss_pred cccccccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCC
Confidence 35666678889999999999988874 3221 1112222333478889999899999999999998888776442211
Q ss_pred ---------eEEEEECCCCeEEEEEecCCCCce-EEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcE
Q psy14130 266 ---------SKAVFIGDTGRIVTTGFSRHSDRQ-VGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNI 335 (494)
Q Consensus 266 ---------~~~~~~~~~~~l~~~g~~~~~d~~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i 335 (494)
..-....+ +.+++++ .++. +.+ |+.+++.. . ... ...... ....++..|++.. .++.|
T Consensus 157 ~~~~~~~~~~~~~~~~~-~~v~~~~----~~g~~~~~-d~~tg~~~--w-~~~-~~~~~~-~~~~~~~~l~~~~-~~~~l 224 (238)
T PF13360_consen 157 SPISSFSDINGSPVISD-GRVYVSS----GDGRVVAV-DLATGEKL--W-SKP-ISGIYS-LPSVDGGTLYVTS-SDGRL 224 (238)
T ss_dssp --EEEETTEEEEEECCT-TEEEEEC----CTSSEEEE-ETTTTEEE--E-EEC-SS-ECE-CEECCCTEEEEEE-TTTEE
T ss_pred cceeeecccccceEEEC-CEEEEEc----CCCeEEEE-ECCCCCEE--E-Eec-CCCccC-CceeeCCEEEEEe-CCCEE
Confidence 12222233 4666665 5664 556 99886532 2 222 222222 2457788885555 89999
Q ss_pred EEEEeeCCCce
Q psy14130 336 RYYELTNERPY 346 (494)
Q Consensus 336 ~~wd~~~~~~~ 346 (494)
..||+++++..
T Consensus 225 ~~~d~~tG~~~ 235 (238)
T PF13360_consen 225 YALDLKTGKVV 235 (238)
T ss_dssp EEEETTTTEEE
T ss_pred EEEECCCCCEE
Confidence 99999999754
|
... |
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=98.21 E-value=0.0059 Score=59.50 Aligned_cols=179 Identities=12% Similarity=0.028 Sum_probs=103.4
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEEecCCCCceE-----EEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCC-
Q psy14130 190 NVVASAGFDYLIILWDVGKGEALTVIDCHPDVIN-----CLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGT- 263 (494)
Q Consensus 190 ~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~-----~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~- 263 (494)
..++.++.++.+..||.++|+.+..+......+. +... .+..++.+..++.+..+|+++|+.+.+.......
T Consensus 146 ~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~--~~~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g 223 (377)
T TIGR03300 146 GLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRGSASPVI--ADGGVLVGFAGGKLVALDLQTGQPLWEQRVALPKG 223 (377)
T ss_pred CEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecCCCCCEE--ECCEEEEECCCCEEEEEEccCCCEeeeeccccCCC
Confidence 3566677899999999999998877654322111 1111 1346778888999999999999876543321100
Q ss_pred --C------c-eEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCc
Q psy14130 264 --R------S-SKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGN 334 (494)
Q Consensus 264 --~------~-~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~ 334 (494)
. + ..... .++.+++++ .++.+..||..+++..-... . .....+. .++..+ ..++.||.
T Consensus 224 ~~~~~~~~~~~~~p~~--~~~~vy~~~----~~g~l~a~d~~tG~~~W~~~---~-~~~~~p~--~~~~~v-yv~~~~G~ 290 (377)
T TIGR03300 224 RTELERLVDVDGDPVV--DGGQVYAVS----YQGRVAALDLRSGRVLWKRD---A-SSYQGPA--VDDNRL-YVTDADGV 290 (377)
T ss_pred CCchhhhhccCCccEE--ECCEEEEEE----cCCEEEEEECCCCcEEEeec---c-CCccCce--EeCCEE-EEECCCCe
Confidence 0 0 11111 235666666 78999999998765422221 1 1122222 245666 44568999
Q ss_pred EEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccceeEEEEeeC
Q psy14130 335 IRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 335 i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~~ 385 (494)
|..+|..+++.+.... ... .....+.....+..+....++.+.+++..+
T Consensus 291 l~~~d~~tG~~~W~~~-~~~-~~~~ssp~i~g~~l~~~~~~G~l~~~d~~t 339 (377)
T TIGR03300 291 VVALDRRSGSELWKND-ELK-YRQLTAPAVVGGYLVVGDFEGYLHWLSRED 339 (377)
T ss_pred EEEEECCCCcEEEccc-ccc-CCccccCEEECCEEEEEeCCCEEEEEECCC
Confidence 9999999997653321 111 111222222222223333477777777665
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=98.19 E-value=0.00046 Score=62.40 Aligned_cols=182 Identities=18% Similarity=0.103 Sum_probs=104.5
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEe-eecCCC-C-ce
Q psy14130 190 NVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQG-VCHPGT-R-SS 266 (494)
Q Consensus 190 ~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~-~~~~~~-~-~~ 266 (494)
..+++++.++.|..||..+|+.+..+.. .+.+.... ..++..++.++.++.+..+|..+|+.+.+. ...... . ..
T Consensus 37 ~~v~~~~~~~~l~~~d~~tG~~~W~~~~-~~~~~~~~-~~~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~ 114 (238)
T PF13360_consen 37 GRVYVASGDGNLYALDAKTGKVLWRFDL-PGPISGAP-VVDGGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRS 114 (238)
T ss_dssp TEEEEEETTSEEEEEETTTSEEEEEEEC-SSCGGSGE-EEETTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB-
T ss_pred CEEEEEcCCCEEEEEECCCCCEEEEeec-ccccccee-eecccccccccceeeeEecccCCcceeeeecccccccccccc
Confidence 4677778999999999999998888774 33222211 224556777778889999999999988774 332111 0 11
Q ss_pred EEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCC---------ceEEeEEeCCCCEEEEEEeCCCc-EE
Q psy14130 267 KAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSS---------GVLFPYYDHDTRILFLAGKGDGN-IR 336 (494)
Q Consensus 267 ~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~l~~~g~~dg~-i~ 336 (494)
.......++.+++.. .++.|..+|+++++..-.... .... ....-....++ .+++ ++.++. +.
T Consensus 115 ~~~~~~~~~~~~~~~----~~g~l~~~d~~tG~~~w~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~v~~-~~~~g~~~~ 187 (238)
T PF13360_consen 115 SSSPAVDGDRLYVGT----SSGKLVALDPKTGKLLWKYPV-GEPRGSSPISSFSDINGSPVISDG-RVYV-SSGDGRVVA 187 (238)
T ss_dssp -SEEEEETTEEEEEE----TCSEEEEEETTTTEEEEEEES-STT-SS--EEEETTEEEEEECCTT-EEEE-ECCTSSEEE
T ss_pred ccCceEecCEEEEEe----ccCcEEEEecCCCcEEEEeec-CCCCCCcceeeecccccceEEECC-EEEE-EcCCCeEEE
Confidence 122222245566555 689999999998765333322 1111 11122222244 6644 446665 55
Q ss_pred EEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec-cceeEEEEeeCC
Q psy14130 337 YYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ-CEIFRFFKLHTT 386 (494)
Q Consensus 337 ~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~-~~~~~~~~l~~~ 386 (494)
+ |+.+++...... ...+..+....++.+.+.. ++.+..|++.++
T Consensus 188 ~-d~~tg~~~w~~~-----~~~~~~~~~~~~~~l~~~~~~~~l~~~d~~tG 232 (238)
T PF13360_consen 188 V-DLATGEKLWSKP-----ISGIYSLPSVDGGTLYVTSSDGRLYALDLKTG 232 (238)
T ss_dssp E-ETTTTEEEEEEC-----SS-ECECEECCCTEEEEEETTTEEEEEETTTT
T ss_pred E-ECCCCCEEEEec-----CCCccCCceeeCCEEEEEeCCCEEEEEECCCC
Confidence 5 999997432111 1123332222333333333 788888888773
|
... |
| >KOG1920|consensus | Back alignment and domain information |
|---|
Probab=98.18 E-value=0.00076 Score=70.67 Aligned_cols=193 Identities=15% Similarity=0.173 Sum_probs=113.8
Q ss_pred EEEEEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEEC----CC---------
Q psy14130 142 AFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDV----GK--------- 208 (494)
Q Consensus 142 ~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~----~~--------- 208 (494)
.+++...+.|.+-|..+... + ....-...|.+++|+|+. ..++-.+.++++.+-+- -.
T Consensus 83 i~v~~~~G~iilvd~et~~~-----e---ivg~vd~GI~aaswS~De-e~l~liT~~~tll~mT~~f~~i~E~~L~~d~~ 153 (1265)
T KOG1920|consen 83 ICVITALGDIILVDPETLEL-----E---IVGNVDNGISAASWSPDE-ELLALITGRQTLLFMTKDFEPIAEKPLDADDE 153 (1265)
T ss_pred EEEEecCCcEEEEcccccce-----e---eeeeccCceEEEeecCCC-cEEEEEeCCcEEEEEeccccchhccccccccc
Confidence 33444445666666665422 1 112234679999999998 58887777777765432 00
Q ss_pred ----------CeEEEEecCC---------------------CCceEEEEEcCCCCEEEEEe----CC-CeEEEEeCCCCc
Q psy14130 209 ----------GEALTVIDCH---------------------PDVINCLSFNRDGSRLVTTC----KD-KTVRVLDPRTGL 252 (494)
Q Consensus 209 ----------~~~~~~~~~h---------------------~~~v~~l~~~~~~~~l~s~~----~d-~~v~iwd~~~~~ 252 (494)
|+....|.|. .+.=++|.|-.||.++++.. .+ +.|++||.+ |.
T Consensus 154 ~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~RkirV~drE-g~ 232 (1265)
T KOG1920|consen 154 RKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTRKIRVYDRE-GA 232 (1265)
T ss_pred cccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCceeEEEeccc-ch
Confidence 0111122211 11224699999999998843 24 899999977 54
Q ss_pred eEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCC-CceEEeEEeCCCCEEEEE--E
Q psy14130 253 VISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSS-SGVLFPYYDHDTRILFLA--G 329 (494)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~--g 329 (494)
+-..-....+. -.+++|-|. +.++++-..+.+|+.|.+|.-+...........+.. ..+..++|+.++..|.+. .
T Consensus 233 Lns~se~~~~l-~~~LsWkPs-gs~iA~iq~~~sd~~IvffErNGL~hg~f~l~~p~de~~ve~L~Wns~sdiLAv~~~~ 310 (1265)
T KOG1920|consen 233 LNSTSEPVEGL-QHSLSWKPS-GSLIAAIQCKTSDSDIVFFERNGLRHGEFVLPFPLDEKEVEELAWNSNSDILAVVTSN 310 (1265)
T ss_pred hhcccCccccc-ccceeecCC-CCeEeeeeecCCCCcEEEEecCCccccccccCCcccccchheeeecCCCCceeeeecc
Confidence 32222222222 457889997 555555445566778999986543332111111222 338899999999988431 3
Q ss_pred eCCCcEEEEEeeCCCce
Q psy14130 330 KGDGNIRYYELTNERPY 346 (494)
Q Consensus 330 ~~dg~i~~wd~~~~~~~ 346 (494)
.....|++|-+.+-.-+
T Consensus 311 ~e~~~v~lwt~~NyhWY 327 (1265)
T KOG1920|consen 311 LENSLVQLWTTGNYHWY 327 (1265)
T ss_pred cccceEEEEEecCeEEE
Confidence 33444999998775543
|
|
| >KOG1832|consensus | Back alignment and domain information |
|---|
Probab=98.16 E-value=2.8e-06 Score=84.97 Aligned_cols=196 Identities=17% Similarity=0.207 Sum_probs=136.1
Q ss_pred cceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCC--eEE
Q psy14130 167 EWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDK--TVR 244 (494)
Q Consensus 167 ~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~--~v~ 244 (494)
....++..|....+|++|+-.. +.|+.|+..|.|+++++.+|.......+|...|+.+.=+-||+.+++.+.-. -..
T Consensus 1092 r~w~~frd~~~~fTc~afs~~~-~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~Plsa 1170 (1516)
T KOG1832|consen 1092 RSWRSFRDETALFTCIAFSGGT-NHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSA 1170 (1516)
T ss_pred ccchhhhccccceeeEEeecCC-ceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHH
Confidence 4456778899999999999986 7999999999999999999999999999999999999999999887766543 477
Q ss_pred EEeCCC-CceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEee--ecCCCceEEeEEeCC
Q psy14130 245 VLDPRT-GLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALET--VDSSSGVLFPYYDHD 321 (494)
Q Consensus 245 iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~--~~~~~~v~~~~~~~~ 321 (494)
+|++.+ +...+++.. ...+.|+.. ...-+.| .......+||+.+......+.. ......-.+..|+|+
T Consensus 1171 LW~~~s~~~~~Hsf~e-----d~~vkFsn~-~q~r~~g---t~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~ 1241 (1516)
T KOG1832|consen 1171 LWDASSTGGPRHSFDE-----DKAVKFSNS-LQFRALG---TEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPC 1241 (1516)
T ss_pred HhccccccCccccccc-----cceeehhhh-HHHHHhc---ccccceEEEecccCcHHHHhcCcchhhhhhccccccCCC
Confidence 999864 234444332 345566554 3333344 3456789999998665443221 112233467889999
Q ss_pred CCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccceeEEEEeeC
Q psy14130 322 TRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 322 ~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~~ 385 (494)
...+ + .|| .+||++..+.+..+ ..+ .---+=.|+|.|..++.+.+ ||++.+
T Consensus 1242 D~LI-l---ndG--vLWDvR~~~aIh~F-D~f---t~~~~G~FHP~g~eVIINSE---IwD~RT 1292 (1516)
T KOG1832|consen 1242 DTLI-L---NDG--VLWDVRIPEAIHRF-DQF---TDYGGGGFHPSGNEVIINSE---IWDMRT 1292 (1516)
T ss_pred cceE-e---eCc--eeeeeccHHHHhhh-hhh---eecccccccCCCceEEeech---hhhhHH
Confidence 9888 3 566 47999987653222 222 11233468999988777654 455443
|
|
| >KOG2114|consensus | Back alignment and domain information |
|---|
Probab=98.15 E-value=0.00033 Score=70.59 Aligned_cols=191 Identities=12% Similarity=0.138 Sum_probs=125.1
Q ss_pred EcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCc-eEEEEEcCCCCEEEEEeCCC-----eEEEEeCCCC------
Q psy14130 184 WHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDV-INCLSFNRDGSRLVTTCKDK-----TVRVLDPRTG------ 251 (494)
Q Consensus 184 ~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~-v~~l~~~~~~~~l~s~~~d~-----~v~iwd~~~~------ 251 (494)
|++.+ ..+|.|+.||.|.+.+- .-+.++.++.+... |+.+....+..+|++.+.|+ .++|||++.-
T Consensus 31 ~~s~~-~~vvigt~~G~V~~Ln~-s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~sP 108 (933)
T KOG2114|consen 31 CSSST-GSVVIGTADGRVVILNS-SFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNSP 108 (933)
T ss_pred EcCCC-ceEEEeeccccEEEecc-cceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCCc
Confidence 46666 58999999998888774 23445778877777 55555544557888877665 4999998643
Q ss_pred ceE--EEeeecC----CCCceEEEEECCCCeEEEEEecCCCCceEEEEeC---CCCCCceeEeeecCCCceEEeEEeCCC
Q psy14130 252 LVI--SQGVCHP----GTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDE---NDLNTPLALETVDSSSGVLFPYYDHDT 322 (494)
Q Consensus 252 ~~~--~~~~~~~----~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~---~~~~~~~~~~~~~~~~~v~~~~~~~~~ 322 (494)
.++ ..+..+. ...+..++.+.+ -..+++|| .+|.|..+.- |.... ..........+|+.+++..++
T Consensus 109 ~c~~~~ri~~~~np~~~~p~s~l~Vs~~-l~~Iv~Gf---~nG~V~~~~GDi~RDrgs-r~~~~~~~~~pITgL~~~~d~ 183 (933)
T KOG2114|consen 109 QCLYEHRIFTIKNPTNPSPASSLAVSED-LKTIVCGF---TNGLVICYKGDILRDRGS-RQDYSHRGKEPITGLALRSDG 183 (933)
T ss_pred ceeeeeeeeccCCCCCCCcceEEEEEcc-ccEEEEEe---cCcEEEEEcCcchhcccc-ceeeeccCCCCceeeEEecCC
Confidence 233 1222211 222444555544 78899997 8999998852 22111 222233456789999999998
Q ss_pred CEE-EEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCc-eeeeccceeEEEEeeC
Q psy14130 323 RIL-FLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRG-CDVTQCEIFRFFKLHT 385 (494)
Q Consensus 323 ~~l-~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~-~~~~~~~~~~~~~l~~ 385 (494)
..+ |++ .-..|.+|.+....|....+.. ++.+..+-+|++... +++++.+.+.+|+...
T Consensus 184 ~s~lFv~--Tt~~V~~y~l~gr~p~~~~ld~--~G~~lnCss~~~~t~qfIca~~e~l~fY~sd~ 244 (933)
T KOG2114|consen 184 KSVLFVA--TTEQVMLYSLSGRTPSLKVLDN--NGISLNCSSFSDGTYQFICAGSEFLYFYDSDG 244 (933)
T ss_pred ceeEEEE--ecceeEEEEecCCCcceeeecc--CCccceeeecCCCCccEEEecCceEEEEcCCC
Confidence 883 333 3467999999854433332332 467788999988655 7777899999998765
|
|
| >KOG1645|consensus | Back alignment and domain information |
|---|
Probab=98.14 E-value=2.2e-05 Score=71.88 Aligned_cols=158 Identities=11% Similarity=0.071 Sum_probs=104.5
Q ss_pred EEEEECCCCeEEEEecCCCCceEEEEEcCCCC-EEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEE
Q psy14130 201 IILWDVGKGEALTVIDCHPDVINCLSFNRDGS-RLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVT 279 (494)
Q Consensus 201 v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~-~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 279 (494)
+++.+..+-+....+..|...|.+++|+|..+ ++..++.+.+|+|.|+++...+..+..+.. +.+++|.-+..+.+.
T Consensus 175 v~~l~~~~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~~~--~wSC~wDlde~h~IY 252 (463)
T KOG1645|consen 175 VQKLESHDFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAYNQ--IWSCCWDLDERHVIY 252 (463)
T ss_pred eEEeccCCcchhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheeccCC--ceeeeeccCCcceeE
Confidence 45555544444555667888999999999776 888999999999999999999999988843 799999999889999
Q ss_pred EEecCCCCceEEEEeCCCCCCceeEeee-cCCCceEEeEE------eCCCCEEEEEEeCCCcEEEEEeeCCCceEEeccc
Q psy14130 280 TGFSRHSDRQVGLWDENDLNTPLALETV-DSSSGVLFPYY------DHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQ 352 (494)
Q Consensus 280 ~g~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~v~~~~~------~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~ 352 (494)
+| ...|.|.|||+|..+.+...... -...+|..++. .+.+..| +....+ +.+|++...........+
T Consensus 253 aG---l~nG~VlvyD~R~~~~~~~e~~a~~t~~pv~~i~~~~~n~~f~~gglL-v~~lt~--l~f~ei~~s~~~~p~vle 326 (463)
T KOG1645|consen 253 AG---LQNGMVLVYDMRQPEGPLMELVANVTINPVHKIAPVQPNKIFTSGGLL-VFALTV--LQFYEIVFSAECLPCVLE 326 (463)
T ss_pred Ee---ccCceEEEEEccCCCchHhhhhhhhccCcceeecccCccccccccceE-Eeeehh--hhhhhhhccccCCCcccc
Confidence 99 89999999999976655433211 11123333222 2334444 444333 567776654322222222
Q ss_pred ccCCCCeeEEEEec
Q psy14130 353 SLSGAPQRGLGFMP 366 (494)
Q Consensus 353 ~~~~~~v~~~~~~p 366 (494)
....+...++...+
T Consensus 327 le~pG~cismqy~~ 340 (463)
T KOG1645|consen 327 LEPPGICISMQYHG 340 (463)
T ss_pred cCCCcceeeeeecC
Confidence 22334455555555
|
|
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=98.12 E-value=0.00022 Score=69.50 Aligned_cols=192 Identities=16% Similarity=0.204 Sum_probs=116.1
Q ss_pred EecccccccEEEEEEcCCCCCEEEEEeCC---CeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEe-CCCe--E
Q psy14130 170 MDLHGHKRRVGYIEWHPTAENVVASAGFD---YLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTC-KDKT--V 243 (494)
Q Consensus 170 ~~~~~h~~~V~~~~~~p~~~~~l~s~s~d---~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~-~d~~--v 243 (494)
+.+..-...+..-+|+|++..+....-.. ..+.++|+.+++....+. ..+.-..-+|+|||+.|+-+. .|+. |
T Consensus 186 ~~l~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~-~~g~~~~P~fspDG~~l~f~~~rdg~~~i 264 (425)
T COG0823 186 QKLTDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILN-FNGNNGAPAFSPDGSKLAFSSSRDGSPDI 264 (425)
T ss_pred eEecccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeec-cCCccCCccCCCCCCEEEEEECCCCCccE
Confidence 34444556677788999985443332222 359999999887554443 233344568999999777554 5665 5
Q ss_pred EEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCce--EEEEeCCCCCCceeEeeecCCCceEEeEEeCC
Q psy14130 244 RVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQ--VGLWDENDLNTPLALETVDSSSGVLFPYYDHD 321 (494)
Q Consensus 244 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~--i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 321 (494)
.++|+..+. +..+....+. -..-.|+|++..++.+. +..|. |.++|+..... ........ .-....|+||
T Consensus 265 y~~dl~~~~-~~~Lt~~~gi-~~~Ps~spdG~~ivf~S---dr~G~p~I~~~~~~g~~~--~riT~~~~-~~~~p~~Spd 336 (425)
T COG0823 265 YLMDLDGKN-LPRLTNGFGI-NTSPSWSPDGSKIVFTS---DRGGRPQIYLYDLEGSQV--TRLTFSGG-GNSNPVWSPD 336 (425)
T ss_pred EEEcCCCCc-ceecccCCcc-ccCccCCCCCCEEEEEe---CCCCCcceEEECCCCCce--eEeeccCC-CCcCccCCCC
Confidence 566877766 3334433333 34667999999998887 55554 55556554332 22222222 2227899999
Q ss_pred CCEEEEEEeCCCc--EEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec
Q psy14130 322 TRILFLAGKGDGN--IRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ 374 (494)
Q Consensus 322 ~~~l~~~g~~dg~--i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~ 374 (494)
|+.++..+..+|. |.+.|+.++.. .+.+.. ......-+|.|++..++..
T Consensus 337 G~~i~~~~~~~g~~~i~~~~~~~~~~-~~~lt~---~~~~e~ps~~~ng~~i~~~ 387 (425)
T COG0823 337 GDKIVFESSSGGQWDIDKNDLASGGK-IRILTS---TYLNESPSWAPNGRMIMFS 387 (425)
T ss_pred CCEEEEEeccCCceeeEEeccCCCCc-EEEccc---cccCCCCCcCCCCceEEEe
Confidence 9999776644555 66777766653 222221 2233455677777766654
|
|
| >PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals | Back alignment and domain information |
|---|
Probab=98.10 E-value=0.0014 Score=63.32 Aligned_cols=244 Identities=14% Similarity=0.118 Sum_probs=118.4
Q ss_pred cceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEe--cC------CCCceEEEEEcC-----CC--
Q psy14130 167 EWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVI--DC------HPDVINCLSFNR-----DG-- 231 (494)
Q Consensus 167 ~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~--~~------h~~~v~~l~~~~-----~~-- 231 (494)
.+...+....++|++++.+.-| ++|.|..+|.+.|.|++....+..- .. ....|+++.|.- |+
T Consensus 77 ~P~~l~~~~~g~vtal~~S~iG--Fvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~yS 154 (395)
T PF08596_consen 77 LPLTLLDAKQGPVTALKNSDIG--FVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYS 154 (395)
T ss_dssp EEEEEE---S-SEEEEEE-BTS--EEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSE
T ss_pred CchhheeccCCcEeEEecCCCc--EEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCccc
Confidence 3444555567899999999776 9999999999999999887766542 22 345688888863 33
Q ss_pred -CEEEEEeCCCeEEEEeCC--C-CceE----EEeeecCCCCceEEE-EECCC---------------------CeEEEEE
Q psy14130 232 -SRLVTTCKDKTVRVLDPR--T-GLVI----SQGVCHPGTRSSKAV-FIGDT---------------------GRIVTTG 281 (494)
Q Consensus 232 -~~l~s~~~d~~v~iwd~~--~-~~~~----~~~~~~~~~~~~~~~-~~~~~---------------------~~l~~~g 281 (494)
-.|++|...|.+.+|.+- . +.-. .....+.+. +..+. +..+. +.+++++
T Consensus 155 Si~L~vGTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~-i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvS 233 (395)
T PF08596_consen 155 SICLLVGTNSGNVLTFKILPSSNGRFSVQFAGATTNHDSP-ILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVS 233 (395)
T ss_dssp EEEEEEEETTSEEEEEEEEE-GGG-EEEEEEEEE--SS-----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-
T ss_pred ceEEEEEeCCCCEEEEEEecCCCCceEEEEeeccccCCCc-eEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEc
Confidence 378899999999999764 1 2111 111133333 44444 32221 2344444
Q ss_pred ecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEe----CCCCEEEEEEeCCCcEEEEEeeCCCceEEecc-cccCC
Q psy14130 282 FSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYD----HDTRILFLAGKGDGNIRYYELTNERPYIHFLN-QSLSG 356 (494)
Q Consensus 282 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~-~~~~~ 356 (494)
+..++++...+.+... ...+.......+.+- ..+...+++-..+|.|++|.+..-+.+....- .....
T Consensus 234 -----e~~irv~~~~~~k~~~--K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~~~~d~ 306 (395)
T PF08596_consen 234 -----ESDIRVFKPPKSKGAH--KSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLPPPLDS 306 (395)
T ss_dssp -----SSEEEEE-TT---EEE--EE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-SS---H
T ss_pred -----ccceEEEeCCCCcccc--eeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhcccCCCcccc
Confidence 8899999987644322 222222222233342 12344448888999999999998776544322 11112
Q ss_pred CCeeEEEEecCCceeee-ccceeEEEEeeCCCCeEEEeEEEeeCCCCCCCCCCCCCCC--CCCcccCHhhhcCC
Q psy14130 357 APQRGLGFMPKRGCDVT-QCEIFRFFKLHTTRNMCEPISMIVPRKSDQFQDDLYPDTA--APVPALSAADWYKG 427 (494)
Q Consensus 357 ~~v~~~~~~p~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~pr~~~~~~~~~~~~~~--~~~~~~~~~~w~~g 427 (494)
..+...+++++|..+.. +...+.++.+..... .. .. ....-.+.+|.+.. ...|..+.-+|..|
T Consensus 307 ~~~~~ssis~~Gdi~~~~gpsE~~l~sv~~~~~-~~--~~----~~~~~~d~L~np~~~ip~rP~~s~lqW~~G 373 (395)
T PF08596_consen 307 RRLSSSSISRNGDIFYWTGPSEIQLFSVWGEGR-TG--SS----LLAPPTDTLYNPNLIIPPRPTISNLQWASG 373 (395)
T ss_dssp HHHTT-EE-TTS-EEEE-SSSEEEEEEEES---------------------B---TT----------TTTS-SS
T ss_pred ccccccEECCCCCEEEEeCcccEEEEEEEccCC-cc--cc----ccCCCCCeEECCCCCCCCcCccchhHhhcc
Confidence 23556778888886644 455566665555211 10 00 00111122333322 13566777789888
|
The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A. |
| >PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats | Back alignment and domain information |
|---|
Probab=98.04 E-value=0.00039 Score=67.59 Aligned_cols=110 Identities=15% Similarity=0.244 Sum_probs=77.9
Q ss_pred EEEEEEcCCCCCEEEEEe----CCCe----EEEEECCCCeE----EEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEE
Q psy14130 179 VGYIEWHPTAENVVASAG----FDYL----IILWDVGKGEA----LTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVL 246 (494)
Q Consensus 179 V~~~~~~p~~~~~l~s~s----~d~~----v~iwd~~~~~~----~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iw 246 (494)
..++.|+-..++.+.|-. .+|. -.+|++..++. +.++ .....|.+++++|+...++.|+.||.|.+|
T Consensus 208 Pl~~~Fs~~~~~qi~tVE~s~s~~g~~~~d~ciYE~~r~klqrvsvtsi-pL~s~v~~ca~sp~E~kLvlGC~DgSiiLy 286 (545)
T PF11768_consen 208 PLDVEFSLNQPYQIHTVEQSISVKGEPSADSCIYECSRNKLQRVSVTSI-PLPSQVICCARSPSEDKLVLGCEDGSIILY 286 (545)
T ss_pred cEEEEccCCCCcEEEEEEEecCCCCCceeEEEEEEeecCceeEEEEEEE-ecCCcceEEecCcccceEEEEecCCeEEEE
Confidence 357778765555665542 3342 34566654432 2223 377899999999999999999999999999
Q ss_pred eCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCC
Q psy14130 247 DPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEN 296 (494)
Q Consensus 247 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~ 296 (494)
|...+..... ... -.+..++|+|+ +.++++| +..|.+.+||+.
T Consensus 287 D~~~~~t~~~--ka~-~~P~~iaWHp~-gai~~V~---s~qGelQ~FD~A 329 (545)
T PF11768_consen 287 DTTRGVTLLA--KAE-FIPTLIAWHPD-GAIFVVG---SEQGELQCFDMA 329 (545)
T ss_pred EcCCCeeeee--eec-ccceEEEEcCC-CcEEEEE---cCCceEEEEEee
Confidence 9987643322 222 33788999999 5677777 688999999975
|
|
| >KOG1008|consensus | Back alignment and domain information |
|---|
Probab=98.01 E-value=1.8e-06 Score=83.45 Aligned_cols=200 Identities=15% Similarity=0.173 Sum_probs=126.1
Q ss_pred cccEEEEEEcCCCC-CEEEEEeCCCeEEEEECCCCeE--EEEecCCCCceEEEEEcC-CCCEEEEEe----CCCeEEEEe
Q psy14130 176 KRRVGYIEWHPTAE-NVVASAGFDYLIILWDVGKGEA--LTVIDCHPDVINCLSFNR-DGSRLVTTC----KDKTVRVLD 247 (494)
Q Consensus 176 ~~~V~~~~~~p~~~-~~l~s~s~d~~v~iwd~~~~~~--~~~~~~h~~~v~~l~~~~-~~~~l~s~~----~d~~v~iwd 247 (494)
...+.|++++-+.. .+++.|..+|.|-+-.++...- -....+|...+++++|++ |.+.||.|- .|..+.|||
T Consensus 56 tqy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwd 135 (783)
T KOG1008|consen 56 TQYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWD 135 (783)
T ss_pred CCCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCcccee
Confidence 34567777655433 5899999999999988865432 234557888999999999 556666664 367899999
Q ss_pred CCCC--ceE--EEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCC-CceeEeeecCCCceEEeEEeC-C
Q psy14130 248 PRTG--LVI--SQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLN-TPLALETVDSSSGVLFPYYDH-D 321 (494)
Q Consensus 248 ~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~v~~~~~~~-~ 321 (494)
+.++ .+. ..+.+........++|..+ .+++.+| ...+.++++|+|... ....+. ...+..+..+| .
T Consensus 136 i~s~ltvPke~~~fs~~~l~gqns~cwlrd-~klvlaG---m~sr~~~ifdlRqs~~~~~svn----Tk~vqG~tVdp~~ 207 (783)
T KOG1008|consen 136 INSLLTVPKESPLFSSSTLDGQNSVCWLRD-TKLVLAG---MTSRSVHIFDLRQSLDSVSSVN----TKYVQGITVDPFS 207 (783)
T ss_pred cccccCCCccccccccccccCccccccccC-cchhhcc---cccchhhhhhhhhhhhhhhhhh----hhhcccceecCCC
Confidence 9876 221 1222212222567888855 7888888 788899999998322 211111 12344455666 4
Q ss_pred CCEEEEEEeCCCcEEEEE-eeCCCceEEecccc--cCCCCeeEEEEecCCc--eeee--ccceeEEEEeeC
Q psy14130 322 TRILFLAGKGDGNIRYYE-LTNERPYIHFLNQS--LSGAPQRGLGFMPKRG--CDVT--QCEIFRFFKLHT 385 (494)
Q Consensus 322 ~~~l~~~g~~dg~i~~wd-~~~~~~~~~~~~~~--~~~~~v~~~~~~p~~~--~~~~--~~~~~~~~~l~~ 385 (494)
..++ +...||.|.+|| .++-+.....+.+- +....+..++|.|.+. +.+. ...+++++++..
T Consensus 208 ~nY~--cs~~dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~~ 276 (783)
T KOG1008|consen 208 PNYF--CSNSDGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDICV 276 (783)
T ss_pred CCce--eccccCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEecccc
Confidence 4554 556799999999 44333222221111 1224589999999654 2222 367889998765
|
|
| >KOG2114|consensus | Back alignment and domain information |
|---|
Probab=98.01 E-value=0.001 Score=67.25 Aligned_cols=191 Identities=14% Similarity=0.159 Sum_probs=117.3
Q ss_pred EEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCC-----eEEEEECCCC------eEEE-
Q psy14130 146 LPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDY-----LIILWDVGKG------EALT- 213 (494)
Q Consensus 146 ~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~-----~v~iwd~~~~------~~~~- 213 (494)
.+....+||-+...- +.++.++.+...+...-+.-++.++|++-+.|+ .+++||++.- +++.
T Consensus 40 igt~~G~V~~Ln~s~------~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~sP~c~~~ 113 (933)
T KOG2114|consen 40 IGTADGRVVILNSSF------QLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNSPQCLYE 113 (933)
T ss_pred EeeccccEEEecccc------eeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCCcceeee
Confidence 333344556555441 333566667666333334444446888888775 5899998643 2331
Q ss_pred -EecC-----CCCceEEEEEcCCCCEEEEEeCCCeEEEEe--CCCCc-eEEEeeecCCCCceEEEEECCCCeEEEEEecC
Q psy14130 214 -VIDC-----HPDVINCLSFNRDGSRLVTTCKDKTVRVLD--PRTGL-VISQGVCHPGTRSSKAVFIGDTGRIVTTGFSR 284 (494)
Q Consensus 214 -~~~~-----h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 284 (494)
.+.. ...++.+++.+.+-+.+|+|-.+|.|..+. +...+ ....+.......++.+.+..++...+.+.
T Consensus 114 ~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s~lFv~--- 190 (933)
T KOG2114|consen 114 HRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKSVLFVA--- 190 (933)
T ss_pred eeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCceeEEEE---
Confidence 1222 246788999999999999999999999884 21111 22223323333488899888866634443
Q ss_pred CCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEe
Q psy14130 285 HSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHF 349 (494)
Q Consensus 285 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~ 349 (494)
.-..|.+|.+.+.. |.....-.+..++.|..+++....+ +++ ++.-+.+||.....+...+
T Consensus 191 -Tt~~V~~y~l~gr~-p~~~~ld~~G~~lnCss~~~~t~qf-Ica-~~e~l~fY~sd~~~~cfaf 251 (933)
T KOG2114|consen 191 -TTEQVMLYSLSGRT-PSLKVLDNNGISLNCSSFSDGTYQF-ICA-GSEFLYFYDSDGRGPCFAF 251 (933)
T ss_pred -ecceeEEEEecCCC-cceeeeccCCccceeeecCCCCccE-EEe-cCceEEEEcCCCcceeeee
Confidence 35679999998533 4333233345677888888777756 444 3567999998866554333
|
|
| >KOG1920|consensus | Back alignment and domain information |
|---|
Probab=97.97 E-value=0.0018 Score=67.96 Aligned_cols=204 Identities=12% Similarity=0.098 Sum_probs=127.6
Q ss_pred ccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeC----CC
Q psy14130 175 HKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDP----RT 250 (494)
Q Consensus 175 h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~----~~ 250 (494)
....|.++.|.-+. +.++.+..+|.|.+-|.++.... ....-...|.+++|+||+..++-.+.++++.+-+- -.
T Consensus 67 gd~~i~s~~fl~d~-~~i~v~~~~G~iilvd~et~~~e-ivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT~~f~~i~ 144 (1265)
T KOG1920|consen 67 GDDEIVSVQFLADT-NSICVITALGDIILVDPETLELE-IVGNVDNGISAASWSPDEELLALITGRQTLLFMTKDFEPIA 144 (1265)
T ss_pred CCcceEEEEEeccc-ceEEEEecCCcEEEEccccccee-eeeeccCceEEEeecCCCcEEEEEeCCcEEEEEeccccchh
Confidence 33689999999997 67888888999999998776432 23335678999999999999999998888876432 11
Q ss_pred -------------------CceEEEeeecCC--------------------CCceEEEEECCCCeEEEE-EecCCCC-ce
Q psy14130 251 -------------------GLVISQGVCHPG--------------------TRSSKAVFIGDTGRIVTT-GFSRHSD-RQ 289 (494)
Q Consensus 251 -------------------~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~l~~~-g~~~~~d-~~ 289 (494)
|+....+.+..+ ..-..+.|-.+ +.++++ +.....+ +.
T Consensus 145 E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgD-g~~fAVs~~~~~~~~Rk 223 (1265)
T KOG1920|consen 145 EKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGD-GEYFAVSFVESETGTRK 223 (1265)
T ss_pred ccccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccC-CcEEEEEEEeccCCcee
Confidence 011111221111 11345888888 555555 3333345 89
Q ss_pred EEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEE--eCCCcEEEEEeeCCCceEEeccccc-CCCCeeEEEEec
Q psy14130 290 VGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAG--KGDGNIRYYELTNERPYIHFLNQSL-SGAPQRGLGFMP 366 (494)
Q Consensus 290 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g--~~dg~i~~wd~~~~~~~~~~~~~~~-~~~~v~~~~~~p 366 (494)
|++||.+ +... ........--.+++|-|.|..+.+.. +.|+.|.+|+-..-+ ...+.-... ...++..++|+.
T Consensus 224 irV~drE-g~Ln--s~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL~-hg~f~l~~p~de~~ve~L~Wns 299 (1265)
T KOG1920|consen 224 IRVYDRE-GALN--STSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGLR-HGEFVLPFPLDEKEVEELAWNS 299 (1265)
T ss_pred EEEeccc-chhh--cccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecCCcc-ccccccCCcccccchheeeecC
Confidence 9999976 2111 11111222345689999998884432 356679999855432 122222222 223499999999
Q ss_pred CCceeee-----ccceeEEEEeeC
Q psy14130 367 KRGCDVT-----QCEIFRFFKLHT 385 (494)
Q Consensus 367 ~~~~~~~-----~~~~~~~~~l~~ 385 (494)
++..++. ....+++|-+..
T Consensus 300 ~sdiLAv~~~~~e~~~v~lwt~~N 323 (1265)
T KOG1920|consen 300 NSDILAVVTSNLENSLVQLWTTGN 323 (1265)
T ss_pred CCCceeeeecccccceEEEEEecC
Confidence 9988877 245588886543
|
|
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.00067 Score=66.16 Aligned_cols=165 Identities=19% Similarity=0.241 Sum_probs=105.1
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCe--EEEEECCCCeEEEEecCCCCceEEEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYL--IILWDVGKGEALTVIDCHPDVINCLSF 227 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~--v~iwd~~~~~~~~~~~~h~~~v~~l~~ 227 (494)
.+.++++.++.. ..+..+.++. ..-+|+|+|..++++...||. |.+.|+..++ +..+....+.-..=.|
T Consensus 219 ~i~~~~l~~g~~-----~~i~~~~g~~---~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~-~~~Lt~~~gi~~~Ps~ 289 (425)
T COG0823 219 RIYYLDLNTGKR-----PVILNFNGNN---GAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKN-LPRLTNGFGINTSPSW 289 (425)
T ss_pred eEEEEeccCCcc-----ceeeccCCcc---CCccCCCCCCEEEEEECCCCCccEEEEcCCCCc-ceecccCCccccCccC
Confidence 488889888743 2223334443 467899999877888888875 5566776665 3345533344446779
Q ss_pred cCCCCEEEEEeC-CCe--EEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCce--EEEEeCCCCCCce
Q psy14130 228 NRDGSRLVTTCK-DKT--VRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQ--VGLWDENDLNTPL 302 (494)
Q Consensus 228 ~~~~~~l~s~~~-d~~--v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~--i~iwd~~~~~~~~ 302 (494)
+|||+.|+-.+. .|. |.++|+..+.. ..+....+. ...-.|+|++.+++..+ ..+|. |.+.|+.+...
T Consensus 290 spdG~~ivf~Sdr~G~p~I~~~~~~g~~~-~riT~~~~~-~~~p~~SpdG~~i~~~~---~~~g~~~i~~~~~~~~~~-- 362 (425)
T COG0823 290 SPDGSKIVFTSDRGGRPQIYLYDLEGSQV-TRLTFSGGG-NSNPVWSPDGDKIVFES---SSGGQWDIDKNDLASGGK-- 362 (425)
T ss_pred CCCCCEEEEEeCCCCCcceEEECCCCCce-eEeeccCCC-CcCccCCCCCCEEEEEe---ccCCceeeEEeccCCCCc--
Confidence 999998887664 444 66667765553 444444443 33667999988888887 34555 66666665443
Q ss_pred eEeeecCCCceEEeEEeCCCCEEEEEEeC
Q psy14130 303 ALETVDSSSGVLFPYYDHDTRILFLAGKG 331 (494)
Q Consensus 303 ~~~~~~~~~~v~~~~~~~~~~~l~~~g~~ 331 (494)
...+..........+.++++.++.+++.
T Consensus 363 -~~~lt~~~~~e~ps~~~ng~~i~~~s~~ 390 (425)
T COG0823 363 -IRILTSTYLNESPSWAPNGRMIMFSSGQ 390 (425)
T ss_pred -EEEccccccCCCCCcCCCCceEEEeccC
Confidence 2333344455577889999888555433
|
|
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.023 Score=55.76 Aligned_cols=145 Identities=12% Similarity=0.093 Sum_probs=87.6
Q ss_pred EEEEEeCCCeEEEEECCCCeEEEEecCCC----C---ceEEEEEcC--CCCEEEEEeCCCeEEEEeCCCCceEEEeeecC
Q psy14130 191 VVASAGFDYLIILWDVGKGEALTVIDCHP----D---VINCLSFNR--DGSRLVTTCKDKTVRVLDPRTGLVISQGVCHP 261 (494)
Q Consensus 191 ~l~s~s~d~~v~iwd~~~~~~~~~~~~h~----~---~v~~l~~~~--~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~ 261 (494)
.++.++.++.+...|..+|+.+....... . ....+.-+| .+..++.++.++.+..+|+.+|+.+-+....
T Consensus 207 ~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~- 285 (394)
T PRK11138 207 GAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSGQIVWKREYG- 285 (394)
T ss_pred EEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEECCCCCEEEeecCC-
Confidence 46667778999999999988765543110 0 011111222 3456777888999999999999876554321
Q ss_pred CCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEee
Q psy14130 262 GTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELT 341 (494)
Q Consensus 262 ~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~ 341 (494)
. ...... .++.+++.. .++.+..+|..++...-....... .....+.. .+..| ..++.||.|++.|..
T Consensus 286 -~-~~~~~~--~~~~vy~~~----~~g~l~ald~~tG~~~W~~~~~~~-~~~~sp~v--~~g~l-~v~~~~G~l~~ld~~ 353 (394)
T PRK11138 286 -S-VNDFAV--DGGRIYLVD----QNDRVYALDTRGGVELWSQSDLLH-RLLTAPVL--YNGYL-VVGDSEGYLHWINRE 353 (394)
T ss_pred -C-ccCcEE--ECCEEEEEc----CCCeEEEEECCCCcEEEcccccCC-CcccCCEE--ECCEE-EEEeCCCEEEEEECC
Confidence 1 122222 235676665 789999999887653221111111 11222222 24556 567789999999999
Q ss_pred CCCceEE
Q psy14130 342 NERPYIH 348 (494)
Q Consensus 342 ~~~~~~~ 348 (494)
+|+.+.+
T Consensus 354 tG~~~~~ 360 (394)
T PRK11138 354 DGRFVAQ 360 (394)
T ss_pred CCCEEEE
Confidence 9986544
|
|
| >PF08953 DUF1899: Domain of unknown function (DUF1899); InterPro: IPR015048 This set of proteins are found in various eukaryotic proteins | Back alignment and domain information |
|---|
Probab=97.93 E-value=6.9e-06 Score=55.78 Aligned_cols=57 Identities=53% Similarity=1.001 Sum_probs=36.3
Q ss_pred cEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEEeccc
Q psy14130 30 TFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHR 86 (494)
Q Consensus 30 ~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~ 86 (494)
..|+++....+++.+++++++....++.+++++|++++++.|+..+||.+.|+|++.
T Consensus 7 KfRhv~g~~~kke~~y~~i~vs~~~~d~n~i~~N~kfiA~~~~~~GGG~~~Vlpl~~ 63 (65)
T PF08953_consen 7 KFRHVFGKPAKKEECYDNIRVSTSSWDSNFIAANPKFIAVPWESGGGGAFAVLPLNK 63 (65)
T ss_dssp TTTT-EEEE--GGGSEES--B-----SS-CEEE-SSEEEEEB--SSS--EEEEETT-
T ss_pred ccccccCccCCccccCcCEEEeCccccCCeEEEcCCEEEEEeccCCccEEEEEeCCC
Confidence 345678888899999999999999999999999999999999999999999999874
|
The function is unknown. ; PDB: 2B4E_A 2AQ5_A. |
| >COG3391 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.0087 Score=58.16 Aligned_cols=207 Identities=13% Similarity=0.075 Sum_probs=135.0
Q ss_pred cCcEEEEEcCCCCCCCCcccceEec-ccccccEEEEEEcCCCCCEEEEEe--CCCeEEEEECCCCeEEEEecCCCCceEE
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDL-HGHKRRVGYIEWHPTAENVVASAG--FDYLIILWDVGKGEALTVIDCHPDVINC 224 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~-~~h~~~V~~~~~~p~~~~~l~s~s--~d~~v~iwd~~~~~~~~~~~~h~~~v~~ 224 (494)
.+.|.+.|..+... .... .+. ....++++|++..+.++-. .++++.+.|..+++.+.+...-..+ ..
T Consensus 95 ~~~v~vid~~~~~~-------~~~~~vG~--~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~~P-~~ 164 (381)
T COG3391 95 SNTVSVIDTATNTV-------LGSIPVGL--GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGNTP-TG 164 (381)
T ss_pred CCeEEEEcCcccce-------eeEeeecc--CCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCCCc-ce
Confidence 45688888665522 2211 122 4568999999865555555 3789999999988888775543344 89
Q ss_pred EEEcCCCCEEEEEe-CCCeEEEEeCCCCceEE-E----eeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCC
Q psy14130 225 LSFNRDGSRLVTTC-KDKTVRVLDPRTGLVIS-Q----GVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDL 298 (494)
Q Consensus 225 l~~~~~~~~l~s~~-~d~~v~iwd~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~ 298 (494)
++++|+|..++.+. .++.|.+.|........ . ..... ....+.+.+++.+++++-. .+.++.+...|..+.
T Consensus 165 ~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~~--~P~~i~v~~~g~~~yV~~~-~~~~~~v~~id~~~~ 241 (381)
T COG3391 165 VAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGVGT--GPAGIAVDPDGNRVYVAND-GSGSNNVLKIDTATG 241 (381)
T ss_pred EEECCCCCeEEEEecCCCeEEEEeCCCcceeccccccccccCC--CCceEEECCCCCEEEEEec-cCCCceEEEEeCCCc
Confidence 99999999666665 78999999987666553 1 22222 2577888899776766651 122368888888764
Q ss_pred CCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCC
Q psy14130 299 NTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKR 368 (494)
Q Consensus 299 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~ 368 (494)
............ ....+..+|+|+.+++.-+..+.+.+.|..+.+..............+..+++.+..
T Consensus 242 ~v~~~~~~~~~~-~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 310 (381)
T COG3391 242 NVTATDLPVGSG-APRGVAVDPAGKAAYVANSQGGTVSVIDGATDRVVKTGPTGNEALGEPVSIAISPLY 310 (381)
T ss_pred eEEEeccccccC-CCCceeECCCCCEEEEEecCCCeEEEEeCCCCceeeeecccccccccceeccceeec
Confidence 432221122222 456688999999998887777899999988876543333322223345666666543
|
|
| >KOG4640|consensus | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.00011 Score=71.57 Aligned_cols=93 Identities=22% Similarity=0.293 Sum_probs=78.6
Q ss_pred ccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceE-EEEEcCCCCEEEEEeCCCeEEEEeCCCCceEE
Q psy14130 177 RRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVIN-CLSFNRDGSRLVTTCKDKTVRVLDPRTGLVIS 255 (494)
Q Consensus 177 ~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~-~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~ 255 (494)
..|.-+.|+|.- .++|.+..+|.|.+..+. .+.+.++.-|...++ +++|.|||+.|+.|-+||+|++.|..++..+.
T Consensus 21 ~~i~~~ewnP~~-dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~ 98 (665)
T KOG4640|consen 21 INIKRIEWNPKM-DLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLV 98 (665)
T ss_pred cceEEEEEcCcc-chhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCcee
Confidence 457789999997 599999999999999987 777888887777777 99999999999999999999999999999887
Q ss_pred EeeecCCCCceEEEEE
Q psy14130 256 QGVCHPGTRSSKAVFI 271 (494)
Q Consensus 256 ~~~~~~~~~~~~~~~~ 271 (494)
.........+..+.|.
T Consensus 99 ~~~~s~e~~is~~~w~ 114 (665)
T KOG4640|consen 99 SFLFSVETDISKGIWD 114 (665)
T ss_pred ccccccccchheeecc
Confidence 7544444446777775
|
|
| >COG3391 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.005 Score=59.83 Aligned_cols=188 Identities=18% Similarity=0.158 Sum_probs=134.2
Q ss_pred EEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeC---CCeEEEEeCCCCceEE
Q psy14130 179 VGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCK---DKTVRVLDPRTGLVIS 255 (494)
Q Consensus 179 V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~---d~~v~iwd~~~~~~~~ 255 (494)
-..++.++.+.+..++...+..|.+.|..+.........- .....+++++++..+..+.. ++++.+.|..+++.+.
T Consensus 76 p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~vG-~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~ 154 (381)
T COG3391 76 PAGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSIPVG-LGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTA 154 (381)
T ss_pred ccceeeCCCCCeEEEecCCCCeEEEEcCcccceeeEeeec-cCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEE
Confidence 3567888888667888877899999998877766665422 26778999999987777665 6899999999999887
Q ss_pred EeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeE--eeecCCCceEEeEEeCCCCEEEEEEeCC-
Q psy14130 256 QGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLAL--ETVDSSSGVLFPYYDHDTRILFLAGKGD- 332 (494)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~g~~d- 332 (494)
....-.. ...+++.|+++.++++- ..++.|.+.|.......... ...........+.++|++..++++-..+
T Consensus 155 ~~~vG~~--P~~~a~~p~g~~vyv~~---~~~~~v~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~ 229 (381)
T COG3391 155 TIPVGNT--PTGVAVDPDGNKVYVTN---SDDNTVSVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSG 229 (381)
T ss_pred EEecCCC--cceEEECCCCCeEEEEe---cCCCeEEEEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEeccCC
Confidence 7543332 47889999988788887 68999999997653221100 0122334556789999999988886665
Q ss_pred -CcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec
Q psy14130 333 -GNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ 374 (494)
Q Consensus 333 -g~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~ 374 (494)
+.+...|..++........ .... ...++...|+|......
T Consensus 230 ~~~v~~id~~~~~v~~~~~~-~~~~-~~~~v~~~p~g~~~yv~ 270 (381)
T COG3391 230 SNNVLKIDTATGNVTATDLP-VGSG-APRGVAVDPAGKAAYVA 270 (381)
T ss_pred CceEEEEeCCCceEEEeccc-cccC-CCCceeECCCCCEEEEE
Confidence 6888888888765332111 1112 46788999999876554
|
|
| >KOG2066|consensus | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.0016 Score=65.36 Aligned_cols=180 Identities=16% Similarity=0.164 Sum_probs=114.1
Q ss_pred CeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeE
Q psy14130 122 HFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLI 201 (494)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v 201 (494)
..|+++.+++++.. ..| .|++.+.+.. + .....|... ..+| .+++|||.||+|
T Consensus 43 s~~av~~~~~~~Gt---H~g--------~v~~~~~~~~--------~-~~~~~~s~~------~~~G-ey~asCS~DGkv 95 (846)
T KOG2066|consen 43 SCCAVHDKFFALGT---HRG--------AVYLTTCQGN--------P-KTNFDHSSS------ILEG-EYVASCSDDGKV 95 (846)
T ss_pred HHHHhhcceeeecc---ccc--------eEEEEecCCc--------c-ccccccccc------ccCC-ceEEEecCCCcE
Confidence 34555666666544 222 4777776543 1 222235443 5567 599999999999
Q ss_pred EEEECCCCeEEEEecCCCCceEEEEEcCC-----CCEEEEEeCCCeEEEEeCCC---CceEEEeeecCCCCceEEEEECC
Q psy14130 202 ILWDVGKGEALTVIDCHPDVINCLSFNRD-----GSRLVTTCKDKTVRVLDPRT---GLVISQGVCHPGTRSSKAVFIGD 273 (494)
Q Consensus 202 ~iwd~~~~~~~~~~~~h~~~v~~l~~~~~-----~~~l~s~~~d~~v~iwd~~~---~~~~~~~~~~~~~~~~~~~~~~~ 273 (494)
.|-.+-+.+...++. ...++.+++++|+ .+.+++|+.-| +.++.-+= ...+ .+....+. +.++.|..
T Consensus 96 ~I~sl~~~~~~~~~d-f~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v-~l~~~eG~-I~~i~W~g- 170 (846)
T KOG2066|consen 96 VIGSLFTDDEITQYD-FKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSV-VLSEGEGP-IHSIKWRG- 170 (846)
T ss_pred EEeeccCCccceeEe-cCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccce-eeecCccc-eEEEEecC-
Confidence 999998888777776 5678999999997 56899999888 77765321 1111 23333445 88898974
Q ss_pred CCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec----CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeC
Q psy14130 274 TGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD----SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTN 342 (494)
Q Consensus 274 ~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~ 342 (494)
.+++-. .|--|++||+........+..-. ...-...+.|.++.+. +.|-+| +|++..++.
T Consensus 171 --~lIAWa----nd~Gv~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~~L--VIGW~d-~v~i~~I~~ 234 (846)
T KOG2066|consen 171 --NLIAWA----NDDGVKVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDEDRL--VIGWGD-SVKICSIKK 234 (846)
T ss_pred --cEEEEe----cCCCcEEEeccccceeeccCCCCCCCCcccCCCceEecCCCeE--EEecCC-eEEEEEEec
Confidence 466666 46669999988654422222111 1112234677666544 456444 788888883
|
|
| >KOG1832|consensus | Back alignment and domain information |
|---|
Probab=97.79 E-value=3.1e-05 Score=77.78 Aligned_cols=162 Identities=12% Similarity=0.209 Sum_probs=116.9
Q ss_pred EEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCc-e
Q psy14130 211 ALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDR-Q 289 (494)
Q Consensus 211 ~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~-~ 289 (494)
...+|..|....++++|+.+.++|+.|+..|.|++|++.+|.......+|... ++.+.=+-++..+++++ +... .
T Consensus 1093 ~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~Sa-vT~vePs~dgs~~Ltss---s~S~Pl 1168 (1516)
T KOG1832|consen 1093 SWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSA-VTLVEPSVDGSTQLTSS---SSSSPL 1168 (1516)
T ss_pred cchhhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccc-cccccccCCcceeeeec---cccCch
Confidence 45567778899999999999999999999999999999999999999999988 88887777877777776 3444 6
Q ss_pred EEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccC-CCCeeEEEEecCC
Q psy14130 290 VGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLS-GAPQRGLGFMPKR 368 (494)
Q Consensus 290 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~-~~~v~~~~~~p~~ 368 (494)
..+|++.....+... -..-.++.|+.....- +.|.......+||++++.++.+++..... ...-..+.|+|+.
T Consensus 1169 saLW~~~s~~~~~Hs-----f~ed~~vkFsn~~q~r-~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~D 1242 (1516)
T KOG1832|consen 1169 SALWDASSTGGPRHS-----FDEDKAVKFSNSLQFR-ALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPCD 1242 (1516)
T ss_pred HHHhccccccCcccc-----ccccceeehhhhHHHH-HhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCCCc
Confidence 789998753222211 1344566777665444 44555567899999999987775554322 2223667899986
Q ss_pred ceeeeccceeEEEEeeC
Q psy14130 369 GCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 369 ~~~~~~~~~~~~~~l~~ 385 (494)
.++.. || -+|++..
T Consensus 1243 ~LIln-dG--vLWDvR~ 1256 (1516)
T KOG1832|consen 1243 TLILN-DG--VLWDVRI 1256 (1516)
T ss_pred ceEee-Cc--eeeeecc
Confidence 65443 33 4677665
|
|
| >PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.035 Score=54.44 Aligned_cols=218 Identities=11% Similarity=0.135 Sum_probs=113.4
Q ss_pred ecCCcEEEEEEcC------------cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEE
Q psy14130 137 VAGGGAFLVLPIH------------RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILW 204 (494)
Q Consensus 137 ~~~~g~~~~~~~~------------~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iw 204 (494)
+..||.+++.... .|+||+.... .+..+.=..+.+.++.|+.+. .|+.-..||.++++
T Consensus 37 a~~gGpIAi~~d~~k~~~~~~~~p~~I~iys~sG~--------ll~~i~w~~~~iv~~~wt~~e--~LvvV~~dG~v~vy 106 (410)
T PF04841_consen 37 APYGGPIAIIRDESKLVPVGSAKPNSIQIYSSSGK--------LLSSIPWDSGRIVGMGWTDDE--ELVVVQSDGTVRVY 106 (410)
T ss_pred cCCCceEEEEecCcccccccCCCCcEEEEECCCCC--------EeEEEEECCCCEEEEEECCCC--eEEEEEcCCEEEEE
Confidence 3456667666655 4888886543 222222222789999999874 45566789999999
Q ss_pred ECCCCeEEEEe-------cCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc-eEEEe---ee-----cCCCCceE-
Q psy14130 205 DVGKGEALTVI-------DCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGL-VISQG---VC-----HPGTRSSK- 267 (494)
Q Consensus 205 d~~~~~~~~~~-------~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~-~~~~~---~~-----~~~~~~~~- 267 (494)
|+. |+....+ .-....+....+..+|-.+++ .++.+.+..-.... ....+ .. +.......
T Consensus 107 ~~~-G~~~fsl~~~i~~~~v~e~~i~~~~~~~~GivvLt--~~~~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i 183 (410)
T PF04841_consen 107 DLF-GEFQFSLGEEIEEEKVLECRIFAIWFYKNGIVVLT--GNNRFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVI 183 (410)
T ss_pred eCC-CceeechhhhccccCcccccccccccCCCCEEEEC--CCCeEEEEeCccccchhhccccCCCcccccccccccccc
Confidence 986 3331111 112222333344445633333 34444443222111 11111 11 10000111
Q ss_pred EEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceE
Q psy14130 268 AVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYI 347 (494)
Q Consensus 268 ~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~ 347 (494)
..+..+....+... .++.+.+.+-..... ++..+.+..++.||+++++ +.-..+|.+.+....-.+.+.
T Consensus 184 ~~l~~~~~~~i~~~----~g~~i~~i~~~~~~~------i~~~~~i~~iavSpng~~i-Al~t~~g~l~v~ssDf~~~~~ 252 (410)
T PF04841_consen 184 PLLSSDRVVEILLA----NGETIYIIDENSFKQ------IDSDGPIIKIAVSPNGKFI-ALFTDSGNLWVVSSDFSEKLC 252 (410)
T ss_pred eEeecCcceEEEEe----cCCEEEEEEcccccc------ccCCCCeEEEEECCCCCEE-EEEECCCCEEEEECcccceeE
Confidence 22333333333333 455566444332111 2344679999999999999 666688999888766555443
Q ss_pred EecccccCCCCeeEEEEecCCceeeeccceeEE
Q psy14130 348 HFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRF 380 (494)
Q Consensus 348 ~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~ 380 (494)
.+-.. ...+...++|.-+...++.-...+.+
T Consensus 253 e~~~~--~~~~p~~~~WCG~dav~l~~~~~l~l 283 (410)
T PF04841_consen 253 EFDTD--SKSPPKQMAWCGNDAVVLSWEDELLL 283 (410)
T ss_pred EeecC--cCCCCcEEEEECCCcEEEEeCCEEEE
Confidence 33222 23556788887765544443333333
|
Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm |
| >COG3204 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.008 Score=53.75 Aligned_cols=166 Identities=18% Similarity=0.163 Sum_probs=113.9
Q ss_pred ecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEe
Q psy14130 215 IDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWD 294 (494)
Q Consensus 215 ~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd 294 (494)
+.+-...+.++.|+|+.+.|++......-.++=..+|+.+.++....-...-.+.|..+ +.++.+- -.++.+.++.
T Consensus 81 i~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~-n~fvi~d---ER~~~l~~~~ 156 (316)
T COG3204 81 ILGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGG-NQFVIVD---ERDRALYLFT 156 (316)
T ss_pred cccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecC-CEEEEEe---hhcceEEEEE
Confidence 34555669999999999999988888777777777899888876544444677888887 6666666 5788888887
Q ss_pred CCCCCCc-------eeEeeecC-CCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCc-eEE-ecccccC-----CCCe
Q psy14130 295 ENDLNTP-------LALETVDS-SSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERP-YIH-FLNQSLS-----GAPQ 359 (494)
Q Consensus 295 ~~~~~~~-------~~~~~~~~-~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~-~~~-~~~~~~~-----~~~v 359 (494)
+...... ..+....+ ..+.-.++|+|.+..| ....+-.-+.||.+..... +.. ....... -.-+
T Consensus 157 vd~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l-~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~Dv 235 (316)
T COG3204 157 VDADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRL-FVAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDV 235 (316)
T ss_pred EcCCccEEeccceEEeccccCCCCcCceeeecCCCCceE-EEEEccCCcEEEEEecCCcccccccccCcccccceEeecc
Confidence 6543221 11222222 4567789999999999 5556777888888875541 111 1111100 1346
Q ss_pred eEEEEec-CCceeeeccceeEEEEeeC
Q psy14130 360 RGLGFMP-KRGCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 360 ~~~~~~p-~~~~~~~~~~~~~~~~l~~ 385 (494)
.++.|.+ ++.++|.++|.-++..+..
T Consensus 236 Sgl~~~~~~~~LLVLS~ESr~l~Evd~ 262 (316)
T COG3204 236 SGLEFNAITNSLLVLSDESRRLLEVDL 262 (316)
T ss_pred ccceecCCCCcEEEEecCCceEEEEec
Confidence 7788886 5678888999999998887
|
|
| >KOG0882|consensus | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00029 Score=65.71 Aligned_cols=184 Identities=13% Similarity=0.090 Sum_probs=122.6
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeC-CCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGF-DYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~-d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
.++.|.-..-. ..+.+..+..|-..|.+++.+-++ .++.|.+. |..++++|+.+-..+.-++- ....-.+.|.
T Consensus 31 h~KFWkKs~is----GvEfVKhFraHL~~I~sl~~S~dg-~L~~Sv~d~Dhs~KvfDvEn~DminmiKL-~~lPg~a~wv 104 (558)
T KOG0882|consen 31 HKKFWKKSRIS----GVEFVKHFRAHLGVILSLAVSYDG-WLFRSVEDPDHSVKVFDVENFDMINMIKL-VDLPGFAEWV 104 (558)
T ss_pred hhhhcCCCCcc----ceeehhhhHHHHHHHHhhhccccc-eeEeeccCcccceeEEEeeccchhhhccc-ccCCCceEEe
Confidence 68899754311 115566777899999999999998 78899777 99999999987554433321 1111122332
Q ss_pred C-CC---CEEE-EEeCCCeEEEEeCCCCc--eEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCC-CCC
Q psy14130 229 R-DG---SRLV-TTCKDKTVRVLDPRTGL--VISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEND-LNT 300 (494)
Q Consensus 229 ~-~~---~~l~-s~~~d~~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~-~~~ 300 (494)
. .| ..|+ +.-.++.+.++|-+... ....-..|..+ +..+.+++.+ ..+.++ ...|.|.-|.... .+.
T Consensus 105 ~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sP-V~~i~y~qa~-Ds~vSi---D~~gmVEyWs~e~~~qf 179 (558)
T KOG0882|consen 105 TSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSP-VKKIRYNQAG-DSAVSI---DISGMVEYWSAEGPFQF 179 (558)
T ss_pred cCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCc-eEEEEeeccc-cceeec---cccceeEeecCCCcccC
Confidence 2 23 1333 33468999999987654 33344567766 8888888874 444444 4789999998762 222
Q ss_pred cee------------EeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCc
Q psy14130 301 PLA------------LETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERP 345 (494)
Q Consensus 301 ~~~------------~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~ 345 (494)
|.. +..........++.|+|++..+ .+-+.|..|+++++.+++.
T Consensus 180 Pr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qi-stl~~DrkVR~F~~KtGkl 235 (558)
T KOG0882|consen 180 PRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQI-STLNPDRKVRGFVFKTGKL 235 (558)
T ss_pred ccccccccccccchhhcccccccCccceEEccccCcc-cccCcccEEEEEEeccchh
Confidence 211 0111234557789999999999 7777999999999999874
|
|
| >smart00320 WD40 WD40 repeats | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00022 Score=42.86 Aligned_cols=39 Identities=28% Similarity=0.569 Sum_probs=34.7
Q ss_pred CeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEe
Q psy14130 209 GEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLD 247 (494)
Q Consensus 209 ~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd 247 (494)
++++..+..|...|.++.|++++..+++++.|+.+++||
T Consensus 2 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 2 GELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred cEEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 355667778999999999999999999999999999996
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. |
| >PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.05 Score=52.42 Aligned_cols=224 Identities=16% Similarity=0.155 Sum_probs=123.4
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEe-cCC----------
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVI-DCH---------- 218 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~-~~h---------- 218 (494)
...|+|+.++.. ..+......+....|+|+| +.+|-.. ++.|.+++..+++..+.- .+-
T Consensus 24 ~y~i~d~~~~~~--------~~l~~~~~~~~~~~~sP~g-~~~~~v~-~~nly~~~~~~~~~~~lT~dg~~~i~nG~~dw 93 (353)
T PF00930_consen 24 DYYIYDIETGEI--------TPLTPPPPKLQDAKWSPDG-KYIAFVR-DNNLYLRDLATGQETQLTTDGEPGIYNGVPDW 93 (353)
T ss_dssp EEEEEETTTTEE--------EESS-EETTBSEEEE-SSS-TEEEEEE-TTEEEEESSTTSEEEESES--TTTEEESB--H
T ss_pred eEEEEecCCCce--------EECcCCccccccceeecCC-CeeEEEe-cCceEEEECCCCCeEEeccccceeEEcCccce
Confidence 588999988622 2222235678899999998 5776665 689999998877544321 220
Q ss_pred ------CCceEEEEEcCCCCEEEEEeCC-C-----------------------------------eEEEEeCCCCceEE-
Q psy14130 219 ------PDVINCLSFNRDGSRLVTTCKD-K-----------------------------------TVRVLDPRTGLVIS- 255 (494)
Q Consensus 219 ------~~~v~~l~~~~~~~~l~s~~~d-~-----------------------------------~v~iwd~~~~~~~~- 255 (494)
-+.-..+-|+|||++|+....| . .+.++|+.+++...
T Consensus 94 vyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v~l~v~~~~~~~~~~~ 173 (353)
T PF00930_consen 94 VYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRVSLFVVDLASGKTTEL 173 (353)
T ss_dssp HHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EEEEEEEESSSTCCCEE
T ss_pred eccccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCccccCCcccccccCCCCCcCCceEEEEEECCCCcEEEe
Confidence 1123568899999998866432 1 23445665555321
Q ss_pred Eee---ecCCCCceEEEEECCCCeEEEEEecCCC-CceEEEEeCCCCCCceeEeeecCC--CceEEeEEe-CCCCEEEEE
Q psy14130 256 QGV---CHPGTRSSKAVFIGDTGRIVTTGFSRHS-DRQVGLWDENDLNTPLALETVDSS--SGVLFPYYD-HDTRILFLA 328 (494)
Q Consensus 256 ~~~---~~~~~~~~~~~~~~~~~~l~~~g~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~--~~v~~~~~~-~~~~~l~~~ 328 (494)
... ......+..+.|.+++..+++.-.++.. ...+.++|..+............. .....+.+. +++..++..
T Consensus 174 ~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~ 253 (353)
T PF00930_consen 174 DPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDVYDPPHFLGPDGNEFLWI 253 (353)
T ss_dssp ---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSSSSEEEE-TTTSSEEEEE
T ss_pred eeccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCCcceeeecccccccCCCCEEEEE
Confidence 111 1123336788898886545555433322 235667787765544333322111 112234454 677666566
Q ss_pred EeCCCcEEEEEeeCCCceEEecccccCCCCeeE-EEEecCCceee-ec----cceeEEEEeeC
Q psy14130 329 GKGDGNIRYYELTNERPYIHFLNQSLSGAPQRG-LGFMPKRGCDV-TQ----CEIFRFFKLHT 385 (494)
Q Consensus 329 g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~-~~~~p~~~~~~-~~----~~~~~~~~l~~ 385 (494)
...||.-+||-+.........+.. ..-.|.. +.+.+++..+. .+ -..-.+|.+..
T Consensus 254 s~~~G~~hly~~~~~~~~~~~lT~--G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~ 314 (353)
T PF00930_consen 254 SERDGYRHLYLYDLDGGKPRQLTS--GDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSL 314 (353)
T ss_dssp EETTSSEEEEEEETTSSEEEESS---SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEET
T ss_pred EEcCCCcEEEEEcccccceecccc--CceeecccceEcCCCCEEEEEecCCCCCceEEEEEEe
Confidence 668998777776654433333332 1334644 66778765332 22 23567777766
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: |
| >PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.022 Score=55.97 Aligned_cols=183 Identities=11% Similarity=0.127 Sum_probs=93.9
Q ss_pred ecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy14130 171 DLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRT 250 (494)
Q Consensus 171 ~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~ 250 (494)
.+-...-....+.++|+| ++++.++ ||.-.|+.......... +.-...+|.+.+ .+|+-...++|.|+.--+
T Consensus 27 ~lg~~~~~p~~ls~npng-r~v~V~g-~geY~iyt~~~~r~k~~-----G~g~~~vw~~~n-~yAv~~~~~~I~I~kn~~ 98 (443)
T PF04053_consen 27 ELGSCEIYPQSLSHNPNG-RFVLVCG-DGEYEIYTALAWRNKAF-----GSGLSFVWSSRN-RYAVLESSSTIKIYKNFK 98 (443)
T ss_dssp EEEE-SS--SEEEE-TTS-SEEEEEE-TTEEEEEETTTTEEEEE-----EE-SEEEE-TSS-EEEEE-TTS-EEEEETTE
T ss_pred cCCCCCcCCeeEEECCCC-CEEEEEc-CCEEEEEEccCCccccc-----CceeEEEEecCc-cEEEEECCCeEEEEEcCc
Confidence 333344557899999998 5666654 78888888554444332 334578899844 577777788999963222
Q ss_pred CceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEe
Q psy14130 251 GLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGK 330 (494)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~ 330 (494)
.+....+.... . +..+ |. +.++... .++.|.+||..+... +..++. ..|..+.|+++++++.+++
T Consensus 99 ~~~~k~i~~~~-~-~~~I-f~---G~LL~~~----~~~~i~~yDw~~~~~---i~~i~v-~~vk~V~Ws~~g~~val~t- 163 (443)
T PF04053_consen 99 NEVVKSIKLPF-S-VEKI-FG---GNLLGVK----SSDFICFYDWETGKL---IRRIDV-SAVKYVIWSDDGELVALVT- 163 (443)
T ss_dssp E-TT-----SS---EEEE-E----SSSEEEE----ETTEEEEE-TTT--E---EEEESS--E-EEEEE-TTSSEEEEE--
T ss_pred cccceEEcCCc-c-cceE-Ec---CcEEEEE----CCCCEEEEEhhHcce---eeEEec-CCCcEEEEECCCCEEEEEe-
Confidence 22222333221 1 2333 32 4455444 366899999987543 333433 3489999999999995554
Q ss_pred CCCcEEEEEeeCC----------CceEEecccccCCCCeeEEEEecCCceeeeccceeEE
Q psy14130 331 GDGNIRYYELTNE----------RPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRF 380 (494)
Q Consensus 331 ~dg~i~~wd~~~~----------~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~ 380 (494)
+..+.+++.... +.....+.+. ...|.+.+|.-+ .++-+....++.
T Consensus 164 -~~~i~il~~~~~~~~~~~~~g~e~~f~~~~E~--~~~IkSg~W~~d-~fiYtT~~~lkY 219 (443)
T PF04053_consen 164 -KDSIYILKYNLEAVAAIPEEGVEDAFELIHEI--SERIKSGCWVED-CFIYTTSNHLKY 219 (443)
T ss_dssp -S-SEEEEEE-HHHHHHBTTTB-GGGEEEEEEE---S--SEEEEETT-EEEEE-TTEEEE
T ss_pred -CCeEEEEEecchhcccccccCchhceEEEEEe--cceeEEEEEEcC-EEEEEcCCeEEE
Confidence 446777766543 0012333322 467999999988 444444335555
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B. |
| >PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.042 Score=49.40 Aligned_cols=166 Identities=18% Similarity=0.181 Sum_probs=98.0
Q ss_pred EecCCCCceEEEEEcCCCC-EEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEE
Q psy14130 214 VIDCHPDVINCLSFNRDGS-RLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGL 292 (494)
Q Consensus 214 ~~~~h~~~v~~l~~~~~~~-~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~i 292 (494)
.+.+-...+.+|+|+|+.. ++++....+.|..++. +|+.++++........-.+++..+ +.++.+. -.++.+.+
T Consensus 16 ~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~~D~EgI~y~g~-~~~vl~~---Er~~~L~~ 90 (248)
T PF06977_consen 16 PLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGFGDYEGITYLGN-GRYVLSE---ERDQRLYI 90 (248)
T ss_dssp E-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS-SSEEEEEE-ST-TEEEEEE---TTTTEEEE
T ss_pred ECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCCCCceeEEEECC-CEEEEEE---cCCCcEEE
Confidence 4556666799999999755 6666677888988897 488888877665445788999877 5666665 46889999
Q ss_pred EeCCCCCCceeE---e--e--e--cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeC---CCceE-Eeccccc----C
Q psy14130 293 WDENDLNTPLAL---E--T--V--DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTN---ERPYI-HFLNQSL----S 355 (494)
Q Consensus 293 wd~~~~~~~~~~---~--~--~--~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~---~~~~~-~~~~~~~----~ 355 (494)
+++......... . . . .+..+.-.++|+|.++.|++ +.+..-..+|.+.. ...+. .....+. .
T Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v-~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (248)
T PF06977_consen 91 FTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFV-AKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLF 169 (248)
T ss_dssp EEE----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEE-EEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--
T ss_pred EEEeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEE-EeCCCChhhEEEccccCccceeeccccccccccce
Confidence 988432221111 1 1 1 13356889999999998855 56777788888875 22211 1111111 2
Q ss_pred CCCeeEEEEecC-CceeeeccceeEEEEeeC
Q psy14130 356 GAPQRGLGFMPK-RGCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 356 ~~~v~~~~~~p~-~~~~~~~~~~~~~~~l~~ 385 (494)
...+.+++++|. +.+++.+++.-++..++.
T Consensus 170 ~~d~S~l~~~p~t~~lliLS~es~~l~~~d~ 200 (248)
T PF06977_consen 170 VRDLSGLSYDPRTGHLLILSDESRLLLELDR 200 (248)
T ss_dssp SS---EEEEETTTTEEEEEETTTTEEEEE-T
T ss_pred eccccceEEcCCCCeEEEEECCCCeEEEECC
Confidence 345789999996 557777888778877776
|
Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A. |
| >PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0077 Score=62.54 Aligned_cols=142 Identities=13% Similarity=0.160 Sum_probs=91.2
Q ss_pred CEEEEE-eCCCeEEEEECCCCeEEEEecCCCCc-eEEEEEcC-----CCCEEEEEeCCCeEEEEeCCCCc--eEEEeeec
Q psy14130 190 NVVASA-GFDYLIILWDVGKGEALTVIDCHPDV-INCLSFNR-----DGSRLVTTCKDKTVRVLDPRTGL--VISQGVCH 260 (494)
Q Consensus 190 ~~l~s~-s~d~~v~iwd~~~~~~~~~~~~h~~~-v~~l~~~~-----~~~~l~s~~~d~~v~iwd~~~~~--~~~~~~~~ 260 (494)
++|+.- .....|+-.|++.|+.+..++.|... |..++=.. ....-+.|-.+..+..||+|-.. ++.. ..|
T Consensus 494 ~mil~~~~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~-~~k 572 (794)
T PF08553_consen 494 NMILLDPNNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDS-QSK 572 (794)
T ss_pred ceEeecCCCCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeec-ccc
Confidence 444443 45578999999999999999877654 55443221 13345677788899999999643 3321 111
Q ss_pred ---CCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEE
Q psy14130 261 ---PGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRY 337 (494)
Q Consensus 261 ---~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~ 337 (494)
......+++-..+ |+ +++| +.+|.||+||--..+....+. .-..+|..+..+.||+++++|+ +..+.+
T Consensus 573 ~Y~~~~~Fs~~aTt~~-G~-iavg---s~~G~IRLyd~~g~~AKT~lp--~lG~pI~~iDvt~DGkwilaTc--~tyLlL 643 (794)
T PF08553_consen 573 QYSSKNNFSCFATTED-GY-IAVG---SNKGDIRLYDRLGKRAKTALP--GLGDPIIGIDVTADGKWILATC--KTYLLL 643 (794)
T ss_pred ccccCCCceEEEecCC-ce-EEEE---eCCCcEEeecccchhhhhcCC--CCCCCeeEEEecCCCcEEEEee--cceEEE
Confidence 2222444444333 44 4555 599999999943222111111 2357899999999999997766 678888
Q ss_pred EEee
Q psy14130 338 YELT 341 (494)
Q Consensus 338 wd~~ 341 (494)
++..
T Consensus 644 i~t~ 647 (794)
T PF08553_consen 644 IDTL 647 (794)
T ss_pred EEEe
Confidence 8863
|
Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ]. |
| >PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.0089 Score=45.50 Aligned_cols=102 Identities=18% Similarity=0.158 Sum_probs=69.0
Q ss_pred EEEEEE---cCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEE
Q psy14130 179 VGYIEW---HPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVIS 255 (494)
Q Consensus 179 V~~~~~---~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~ 255 (494)
|++|++ ..+|.+.|+.||.|..||+|+- .+.+..+. -.+.|++++-... ..++.+..+|+|-+|+-.. .+.
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~--~e~~~Ei~-e~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~~--RlW 75 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKG--DEIVAEIT-ETDKVTSLCSLGG-GRFAYALANGTVGVYDRSQ--RLW 75 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeC--CcEEEEEe-cccceEEEEEcCC-CEEEEEecCCEEEEEeCcc--eee
Confidence 455554 5566689999999999999984 46677776 4567888887765 5789999999999998532 222
Q ss_pred EeeecCCCCceEEEEECC---CCeEEEEEecCCCCceEE
Q psy14130 256 QGVCHPGTRSSKAVFIGD---TGRIVTTGFSRHSDRQVG 291 (494)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~---~~~l~~~g~~~~~d~~i~ 291 (494)
..+ +..++.++.+..- +..-+.+|+ ++|.|-
T Consensus 76 RiK--SK~~~~~~~~~D~~gdG~~eLI~Gw---snGkve 109 (111)
T PF14783_consen 76 RIK--SKNQVTSMAFYDINGDGVPELIVGW---SNGKVE 109 (111)
T ss_pred eec--cCCCeEEEEEEcCCCCCceEEEEEe---cCCeEE
Confidence 222 2223566665543 334566673 677664
|
|
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.047 Score=53.55 Aligned_cols=214 Identities=8% Similarity=-0.081 Sum_probs=113.3
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccccccEEE-EEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEE-E
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGY-IEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINC-L 225 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~-~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~-l 225 (494)
.+.+.-+|..+++..... .+.+ .+.+ .... + ..++.++.++.+.-+|..+|+.+..+......+.. .
T Consensus 129 ~g~l~ald~~tG~~~W~~-----~~~~---~~~ssP~v~-~--~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~ 197 (394)
T PRK11138 129 KGQVYALNAEDGEVAWQT-----KVAG---EALSRPVVS-D--GLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRG 197 (394)
T ss_pred CCEEEEEECCCCCCcccc-----cCCC---ceecCCEEE-C--CEEEEECCCCEEEEEEccCCCEeeeecCCCCcccccC
Confidence 346788888888553222 1111 1111 1111 2 35666778899999999999988777532111000 0
Q ss_pred EEcC--CCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCC---C---ceEEEEEC--CCCeEEEEEecCCCCceEEEEeC
Q psy14130 226 SFNR--DGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGT---R---SSKAVFIG--DTGRIVTTGFSRHSDRQVGLWDE 295 (494)
Q Consensus 226 ~~~~--~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~---~---~~~~~~~~--~~~~l~~~g~~~~~d~~i~iwd~ 295 (494)
.-+| .+..++.++.++.+..+|..+|+.+.+....... . ...+...| .++.+++++ .++.+..+|+
T Consensus 198 ~~sP~v~~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~----~~g~l~ald~ 273 (394)
T PRK11138 198 ESAPATAFGGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALA----YNGNLVALDL 273 (394)
T ss_pred CCCCEEECCEEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEE----cCCeEEEEEC
Confidence 0111 1335677788999999999999866554321110 0 00000111 135677666 6899999999
Q ss_pred CCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeecc
Q psy14130 296 NDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQC 375 (494)
Q Consensus 296 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~ 375 (494)
.+++..-... . .....+.. .+..+|+ ++.||.+..+|..+++.+...-. . ......+.....+..++...+
T Consensus 274 ~tG~~~W~~~-~---~~~~~~~~--~~~~vy~-~~~~g~l~ald~~tG~~~W~~~~-~-~~~~~~sp~v~~g~l~v~~~~ 344 (394)
T PRK11138 274 RSGQIVWKRE-Y---GSVNDFAV--DGGRIYL-VDQNDRVYALDTRGGVELWSQSD-L-LHRLLTAPVLYNGYLVVGDSE 344 (394)
T ss_pred CCCCEEEeec-C---CCccCcEE--ECCEEEE-EcCCCeEEEEECCCCcEEEcccc-c-CCCcccCCEEECCEEEEEeCC
Confidence 8765432211 1 11112222 4556634 56899999999999875433211 0 011122222332222333346
Q ss_pred ceeEEEEeeC
Q psy14130 376 EIFRFFKLHT 385 (494)
Q Consensus 376 ~~~~~~~l~~ 385 (494)
+.+..++..+
T Consensus 345 G~l~~ld~~t 354 (394)
T PRK11138 345 GYLHWINRED 354 (394)
T ss_pred CEEEEEECCC
Confidence 6666666655
|
|
| >PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.0064 Score=63.10 Aligned_cols=141 Identities=16% Similarity=0.169 Sum_probs=89.7
Q ss_pred CEEEEE-eCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCC------CeEEEEEecCCCCceEEEEeCCCCCCcee-
Q psy14130 232 SRLVTT-CKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDT------GRIVTTGFSRHSDRQVGLWDENDLNTPLA- 303 (494)
Q Consensus 232 ~~l~s~-~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~l~~~g~~~~~d~~i~iwd~~~~~~~~~- 303 (494)
++|+.. .....|+-.|+..|+.+.++..|....+. .+.|+. +.-...| -++..+..||.|-....+.
T Consensus 494 ~mil~~~~~~~~ly~mDLe~GKVV~eW~~~~~~~v~--~~~p~~K~aqlt~e~tflG---ls~n~lfriDpR~~~~k~v~ 568 (794)
T PF08553_consen 494 NMILLDPNNPNKLYKMDLERGKVVEEWKVHDDIPVV--DIAPDSKFAQLTNEQTFLG---LSDNSLFRIDPRLSGNKLVD 568 (794)
T ss_pred ceEeecCCCCCceEEEecCCCcEEEEeecCCCccee--EecccccccccCCCceEEE---ECCCceEEeccCCCCCceee
Confidence 344433 35678999999999999999998865333 333431 1222334 3688899999985332221
Q ss_pred --EeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccce-eEE
Q psy14130 304 --LETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEI-FRF 380 (494)
Q Consensus 304 --~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~-~~~ 380 (494)
...........|++-+.+| +| |.|+.+|.||+||- .++.-.+.+.. .+.||.+|..+.||..+++.|.+ +-+
T Consensus 569 ~~~k~Y~~~~~Fs~~aTt~~G-~i-avgs~~G~IRLyd~-~g~~AKT~lp~--lG~pI~~iDvt~DGkwilaTc~tyLlL 643 (794)
T PF08553_consen 569 SQSKQYSSKNNFSCFATTEDG-YI-AVGSNKGDIRLYDR-LGKRAKTALPG--LGDPIIGIDVTADGKWILATCKTYLLL 643 (794)
T ss_pred ccccccccCCCceEEEecCCc-eE-EEEeCCCcEEeecc-cchhhhhcCCC--CCCCeeEEEecCCCcEEEEeecceEEE
Confidence 1112233445666666555 44 78999999999994 44332333433 27899999999999988776543 344
Q ss_pred EE
Q psy14130 381 FK 382 (494)
Q Consensus 381 ~~ 382 (494)
++
T Consensus 644 i~ 645 (794)
T PF08553_consen 644 ID 645 (794)
T ss_pred EE
Confidence 44
|
Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ]. |
| >PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.13 Score=50.93 Aligned_cols=204 Identities=16% Similarity=0.127 Sum_probs=105.6
Q ss_pred cEEEEEEcCCCCCEEEEEeCCC----eEEEEECCCCeEEEE-ecCCCCceEEEEEcCCCCEEEEEeCCC-----------
Q psy14130 178 RVGYIEWHPTAENVVASAGFDY----LIILWDVGKGEALTV-IDCHPDVINCLSFNRDGSRLVTTCKDK----------- 241 (494)
Q Consensus 178 ~V~~~~~~p~~~~~l~s~s~d~----~v~iwd~~~~~~~~~-~~~h~~~v~~l~~~~~~~~l~s~~~d~----------- 241 (494)
.+....++|++..++++-+..| .+++.|+.+++.+.. +... ...++.|.++++.|+....+.
T Consensus 125 ~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~--~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~ 202 (414)
T PF02897_consen 125 SLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENP--KFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPR 202 (414)
T ss_dssp EEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEE--ESEEEEECTTSSEEEEEECSTTTSS-CCGCCE
T ss_pred EeeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCccccc--ccceEEEeCCCCEEEEEEeCcccccccCCCCc
Confidence 3446889999954444545544 599999999976543 2321 112399999988877665433
Q ss_pred eEEEEeCCCCce--EEEeeecCCCC-ceEEEEECCCCeEEEEEecCCCCceEEEEeCCCC---CCceeEeeecCCCceEE
Q psy14130 242 TVRVLDPRTGLV--ISQGVCHPGTR-SSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDL---NTPLALETVDSSSGVLF 315 (494)
Q Consensus 242 ~v~iwd~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~---~~~~~~~~~~~~~~v~~ 315 (494)
.|+.|.+.++.. ...+....... ...+..++++..++....+......+.+.|+... ....... .....++..
T Consensus 203 ~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l-~~~~~~~~~ 281 (414)
T PF02897_consen 203 QVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLL-SPREDGVEY 281 (414)
T ss_dssp EEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEE-EESSSS-EE
T ss_pred EEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEE-eCCCCceEE
Confidence 378888877652 23344444332 4567778886666655533222367899998864 1222221 122233333
Q ss_pred eEEeCCCCEEEEEE--eCCCcEEEEEeeCCCc--eEEecccccCCCCeeEEEEecCCceeeec-c--ceeEEEEee
Q psy14130 316 PYYDHDTRILFLAG--KGDGNIRYYELTNERP--YIHFLNQSLSGAPQRGLGFMPKRGCDVTQ-C--EIFRFFKLH 384 (494)
Q Consensus 316 ~~~~~~~~~l~~~g--~~dg~i~~wd~~~~~~--~~~~~~~~~~~~~v~~~~~~p~~~~~~~~-~--~~~~~~~l~ 384 (494)
..-...+.+++.+. ...+.|.-.++..... ....+........+.++....+..++... + ..++++++.
T Consensus 282 ~v~~~~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~Lvl~~~~~~~~~l~v~~~~ 357 (414)
T PF02897_consen 282 YVDHHGDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSLFKDYLVLSYRENGSSRLRVYDLD 357 (414)
T ss_dssp EEEEETTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEEETTEEEEEEEETTEEEEEEEETT
T ss_pred EEEccCCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEEECCEEEEEEEECCccEEEEEECC
Confidence 22222444443442 2345566666666542 12223222222346666655444333322 3 345555555
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A .... |
| >PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.098 Score=49.66 Aligned_cols=167 Identities=13% Similarity=0.176 Sum_probs=97.6
Q ss_pred CEEEEEeC----------CCeEEEEECCCC----eEEEEe--cCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc-
Q psy14130 190 NVVASAGF----------DYLIILWDVGKG----EALTVI--DCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGL- 252 (494)
Q Consensus 190 ~~l~s~s~----------d~~v~iwd~~~~----~~~~~~--~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~- 252 (494)
.+++.|+. .|.|.++++... ..+..+ ....++|++++-- ++. |+.+. .+.|.+|++...+
T Consensus 43 ~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i~~~~~~g~V~ai~~~-~~~-lv~~~-g~~l~v~~l~~~~~ 119 (321)
T PF03178_consen 43 EYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLIHSTEVKGPVTAICSF-NGR-LVVAV-GNKLYVYDLDNSKT 119 (321)
T ss_dssp EEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEEEEEEESS-EEEEEEE-TTE-EEEEE-TTEEEEEEEETTSS
T ss_pred CEEEEEecccccccccccCcEEEEEEEEcccccceEEEEEEEEeecCcceEhhhh-CCE-EEEee-cCEEEEEEccCccc
Confidence 57777743 289999999884 122221 2357889998876 444 44444 4789999999888
Q ss_pred eEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCC-ceeEeeecCCCceEEeEEeCCCCEEEEEEeC
Q psy14130 253 VISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNT-PLALETVDSSSGVLFPYYDHDTRILFLAGKG 331 (494)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~ 331 (494)
....-..+....+.++....+ ++.+| .....+.++..+.... ...+..-.....+.++.+-++++.+ +++..
T Consensus 120 l~~~~~~~~~~~i~sl~~~~~---~I~vg---D~~~sv~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~-i~~D~ 192 (321)
T PF03178_consen 120 LLKKAFYDSPFYITSLSVFKN---YILVG---DAMKSVSLLRYDEENNKLILVARDYQPRWVTAAEFLVDEDTI-IVGDK 192 (321)
T ss_dssp EEEEEEE-BSSSEEEEEEETT---EEEEE---ESSSSEEEEEEETTTE-EEEEEEESS-BEEEEEEEE-SSSEE-EEEET
T ss_pred chhhheecceEEEEEEecccc---EEEEE---EcccCEEEEEEEccCCEEEEEEecCCCccEEEEEEecCCcEE-EEEcC
Confidence 555555444444666666543 55555 4666777764433222 2222222234567888888777655 88999
Q ss_pred CCcEEEEEeeCC------Cc-eEEecccccCCCCeeEE---EEec
Q psy14130 332 DGNIRYYELTNE------RP-YIHFLNQSLSGAPQRGL---GFMP 366 (494)
Q Consensus 332 dg~i~~wd~~~~------~~-~~~~~~~~~~~~~v~~~---~~~p 366 (494)
+|.+.++..... .. .......+..+..|+++ ++.|
T Consensus 193 ~gnl~~l~~~~~~~~~~~~~~~L~~~~~f~lg~~v~~~~~~~l~~ 237 (321)
T PF03178_consen 193 DGNLFVLRYNPEIPNSRDGDPKLERISSFHLGDIVNSFRRGSLIP 237 (321)
T ss_dssp TSEEEEEEE-SS-SSTTTTTTBEEEEEEEE-SS-EEEEEE--SS-
T ss_pred CCeEEEEEECCCCcccccccccceeEEEEECCCccceEEEEEeee
Confidence 999999998742 11 23444555556778887 5555
|
CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A .... |
| >PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.051 Score=51.59 Aligned_cols=175 Identities=13% Similarity=0.113 Sum_probs=103.8
Q ss_pred CeEEEEECCCCeEEEEecC-CCCceEEEE---EcCC----CCEEEEEeC----------CCeEEEEeCCCC-----c--e
Q psy14130 199 YLIILWDVGKGEALTVIDC-HPDVINCLS---FNRD----GSRLVTTCK----------DKTVRVLDPRTG-----L--V 253 (494)
Q Consensus 199 ~~v~iwd~~~~~~~~~~~~-h~~~v~~l~---~~~~----~~~l~s~~~----------d~~v~iwd~~~~-----~--~ 253 (494)
..|++.|..+.+.+.++.- ..+.+++++ +..+ ..+|+.|+. .|.|.++++... + .
T Consensus 2 s~i~l~d~~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~ 81 (321)
T PF03178_consen 2 SSIRLVDPTTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKL 81 (321)
T ss_dssp -EEEEEETTTSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEE
T ss_pred cEEEEEeCCCCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEE
Confidence 3688888888776665432 233444443 4432 457776653 289999999984 2 2
Q ss_pred EEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCC
Q psy14130 254 ISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDG 333 (494)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg 333 (494)
+.+.. ..+. +.+++-. +++++++. ++.|.+|++............+....+.++... ++++ +.|....
T Consensus 82 i~~~~-~~g~-V~ai~~~--~~~lv~~~-----g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~--~~~I-~vgD~~~ 149 (321)
T PF03178_consen 82 IHSTE-VKGP-VTAICSF--NGRLVVAV-----GNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVF--KNYI-LVGDAMK 149 (321)
T ss_dssp EEEEE-ESS--EEEEEEE--TTEEEEEE-----TTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEE--TTEE-EEEESSS
T ss_pred EEEEe-ecCc-ceEhhhh--CCEEEEee-----cCEEEEEEccCcccchhhheecceEEEEEEecc--ccEE-EEEEccc
Confidence 22222 2444 7777766 35655555 789999999875533444444444456665554 5577 7888888
Q ss_pred cEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 334 NIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 334 ~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
.+.++.++........+..-.....+.++.|.+++..++.+ ++.+.++....
T Consensus 150 sv~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~ 203 (321)
T PF03178_consen 150 SVSLLRYDEENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNP 203 (321)
T ss_dssp SEEEEEEETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-S
T ss_pred CEEEEEEEccCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECC
Confidence 89988777643323333333335568899998766444444 66777777653
|
CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A .... |
| >smart00320 WD40 WD40 repeats | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00045 Score=41.38 Aligned_cols=38 Identities=37% Similarity=0.556 Sum_probs=32.9
Q ss_pred cceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEE
Q psy14130 167 EWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWD 205 (494)
Q Consensus 167 ~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd 205 (494)
.+...+..|...|.++.|++.+ .++++++.|+.+++||
T Consensus 3 ~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 3 ELLKTLKGHTGPVTSVAFSPDG-KYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEEecCCceeEEEECCCC-CEEEEecCCCeEEEcC
Confidence 3455667789999999999987 7999999999999996
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. |
| >PRK13616 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.042 Score=56.23 Aligned_cols=179 Identities=14% Similarity=0.078 Sum_probs=96.6
Q ss_pred ccccEEEEEEcCCCCCEEEEEe-----CCC--eEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCC-------
Q psy14130 175 HKRRVGYIEWHPTAENVVASAG-----FDY--LIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKD------- 240 (494)
Q Consensus 175 h~~~V~~~~~~p~~~~~l~s~s-----~d~--~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d------- 240 (494)
....+.+.+.+|+|....++.. .|+ .|.+++. .+.......+ ...+.-.|+|||+.|++.+..
T Consensus 348 ~~~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~-gg~~~~lt~g--~~~t~PsWspDG~~lw~v~dg~~~~~v~ 424 (591)
T PRK13616 348 QMGNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPL-GGVAVQVLEG--HSLTRPSWSLDADAVWVVVDGNTVVRVI 424 (591)
T ss_pred cccCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeC-CCcceeeecC--CCCCCceECCCCCceEEEecCcceEEEe
Confidence 3346789999999965555542 243 5555565 2333222333 237888999999988877533
Q ss_pred -----CeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEE---EeCCCCCCce-eEeee--cC
Q psy14130 241 -----KTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGL---WDENDLNTPL-ALETV--DS 309 (494)
Q Consensus 241 -----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~i---wd~~~~~~~~-~~~~~--~~ 309 (494)
+.+.+.++..++... ...+. +..+.|+|++.+++... ++.|.+ -....+...+ ....+ ..
T Consensus 425 ~~~~~gql~~~~vd~ge~~~---~~~g~-Issl~wSpDG~RiA~i~-----~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l 495 (591)
T PRK13616 425 RDPATGQLARTPVDASAVAS---RVPGP-ISELQLSRDGVRAAMII-----GGKVYLAVVEQTEDGQYALTNPREVGPGL 495 (591)
T ss_pred ccCCCceEEEEeccCchhhh---ccCCC-cCeEEECCCCCEEEEEE-----CCEEEEEEEEeCCCCceeecccEEeeccc
Confidence 223333443333222 11233 89999999988888776 467776 3323322111 00111 11
Q ss_pred CCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecC
Q psy14130 310 SSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPK 367 (494)
Q Consensus 310 ~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 367 (494)
...+..+.|..++..+++ ..++...+|.+.-.-.....+..-....++.+++=.|.
T Consensus 496 ~~~~~~l~W~~~~~L~V~--~~~~~~~v~~v~vDG~~~~~~~~~n~~~~v~~vaa~~~ 551 (591)
T PRK13616 496 GDTAVSLDWRTGDSLVVG--RSDPEHPVWYVNLDGSNSDALPSRNLSAPVVAVAASPS 551 (591)
T ss_pred CCccccceEecCCEEEEE--ecCCCCceEEEecCCccccccCCCCccCceEEEecCCc
Confidence 223578899999986533 33444445555432211122122112456777777774
|
|
| >PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.05 Score=51.94 Aligned_cols=148 Identities=15% Similarity=0.155 Sum_probs=79.3
Q ss_pred EEEEEEcCCCCCEEEEEeC--------------------CCeEEEEECCCCeEEEEecCCC--CceEEEEEcCC--CCE-
Q psy14130 179 VGYIEWHPTAENVVASAGF--------------------DYLIILWDVGKGEALTVIDCHP--DVINCLSFNRD--GSR- 233 (494)
Q Consensus 179 V~~~~~~p~~~~~l~s~s~--------------------d~~v~iwd~~~~~~~~~~~~h~--~~v~~l~~~~~--~~~- 233 (494)
-..+.|+|.. +.++|.+. ..++.+||+.+.+.++++.--. .....|.|..+ ..+
T Consensus 183 gYDfw~qpr~-nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~g 261 (461)
T PF05694_consen 183 GYDFWYQPRH-NVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYG 261 (461)
T ss_dssp ---EEEETTT-TEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EE
T ss_pred CCCeEEcCCC-CEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccce
Confidence 3567777775 67777643 4689999999999999987433 24667888664 333
Q ss_pred EEEEeCCCeEEEE-eCCCCc----eEEEeeec--------C--------CCCceEEEEECCCCeEEEEEecCCCCceEEE
Q psy14130 234 LVTTCKDKTVRVL-DPRTGL----VISQGVCH--------P--------GTRSSKAVFIGDTGRIVTTGFSRHSDRQVGL 292 (494)
Q Consensus 234 l~s~~~d~~v~iw-d~~~~~----~~~~~~~~--------~--------~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~i 292 (494)
++.+....+|..| ....++ .+.++... . ..-++.+..+.++..|+++.| ..|.|+.
T Consensus 262 Fvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W---~~Gdvrq 338 (461)
T PF05694_consen 262 FVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDILISLDDRFLYVSNW---LHGDVRQ 338 (461)
T ss_dssp EEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------EEE-TTS-EEEEEET---TTTEEEE
T ss_pred EEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCceEeEEEccCCCEEEEEcc---cCCcEEE
Confidence 3333344455544 334443 22222211 0 122678888999888888884 8999999
Q ss_pred EeCCCCCCceeEeeecC-----------------CCceEEeEEeCCCCEEEEEEe
Q psy14130 293 WDENDLNTPLALETVDS-----------------SSGVLFPYYDHDTRILFLAGK 330 (494)
Q Consensus 293 wd~~~~~~~~~~~~~~~-----------------~~~v~~~~~~~~~~~l~~~g~ 330 (494)
||+.+...|.......- .++...+..|.||+.||+|.|
T Consensus 339 YDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgPqMvqlS~DGkRlYvTnS 393 (461)
T PF05694_consen 339 YDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGPQMVQLSLDGKRLYVTNS 393 (461)
T ss_dssp EE-SSTTS-EEEEEEE-BTTTT-B--TTS------S----EEE-TTSSEEEEE--
T ss_pred EecCCCCCCcEEeEEEECcEeccCCCccccccccCCCCCeEEEccCCeEEEEEee
Confidence 99998877766543211 123467889999999999875
|
The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A. |
| >KOG2395|consensus | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.01 Score=57.16 Aligned_cols=142 Identities=15% Similarity=0.152 Sum_probs=93.4
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCC--EE-----EEEeCCCeEEEEeCCCCc--eEEEeeec
Q psy14130 190 NVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGS--RL-----VTTCKDKTVRVLDPRTGL--VISQGVCH 260 (494)
Q Consensus 190 ~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~--~l-----~s~~~d~~v~iwd~~~~~--~~~~~~~~ 260 (494)
-+|.++..-..++-.|++.|+.+..++-+.. |+-+.+.|+.+ .| +.|-.|..|.-||+|-.. .+....+|
T Consensus 347 lil~~~~~~~~l~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~k 425 (644)
T KOG2395|consen 347 LILMDGGEQDKLYKLDIERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSK 425 (644)
T ss_pred eEeeCCCCcCcceeeecccceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeecc
Confidence 3455666667788899999999999987766 88888888643 22 346678899999998443 22222333
Q ss_pred C---CCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEE
Q psy14130 261 P---GTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRY 337 (494)
Q Consensus 261 ~---~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~ 337 (494)
. .....+.+-..+ +.+++.+ .+|.||+||--.......+. .-..+|..+..+.+|++|++|+ +.++.+
T Consensus 426 qy~~k~nFsc~aTT~s-G~IvvgS----~~GdIRLYdri~~~AKTAlP--gLG~~I~hVdvtadGKwil~Tc--~tyLlL 496 (644)
T KOG2395|consen 426 QYSTKNNFSCFATTES-GYIVVGS----LKGDIRLYDRIGRRAKTALP--GLGDAIKHVDVTADGKWILATC--KTYLLL 496 (644)
T ss_pred ccccccccceeeecCC-ceEEEee----cCCcEEeehhhhhhhhhccc--ccCCceeeEEeeccCcEEEEec--ccEEEE
Confidence 2 222344444333 5555554 99999999963222222222 2346789999999999996665 677888
Q ss_pred EEee
Q psy14130 338 YELT 341 (494)
Q Consensus 338 wd~~ 341 (494)
-++.
T Consensus 497 i~t~ 500 (644)
T KOG2395|consen 497 IDTL 500 (644)
T ss_pred EEEe
Confidence 7774
|
|
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.026 Score=56.67 Aligned_cols=159 Identities=11% Similarity=0.025 Sum_probs=103.7
Q ss_pred EEEcCCCCEEEEEe-CCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCC------------------
Q psy14130 225 LSFNRDGSRLVTTC-KDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRH------------------ 285 (494)
Q Consensus 225 l~~~~~~~~l~s~~-~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~------------------ 285 (494)
+=+.|||+.+...+ ..+.+.+.|..+.+...++.-... ...+.+.++++++++++|+.-
T Consensus 198 ~PlpnDGk~l~~~~ey~~~vSvID~etmeV~~qV~Vdgn--pd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vv 275 (635)
T PRK02888 198 IPLPNDGKDLDDPKKYRSLFTAVDAETMEVAWQVMVDGN--LDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVV 275 (635)
T ss_pred cccCCCCCEeecccceeEEEEEEECccceEEEEEEeCCC--cccceECCCCCEEEEeccCcccCcceeeeccccCceEEE
Confidence 33566776554333 356788889888877766654432 456677788777777754210
Q ss_pred ------------------CCceEEEEeCCCC--CCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCc
Q psy14130 286 ------------------SDRQVGLWDENDL--NTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERP 345 (494)
Q Consensus 286 ------------------~d~~i~iwd~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~ 345 (494)
.++.|.+.|.++. ........+........+.++|||+++++++..+.++.++|+.+.+.
T Consensus 276 fni~~iea~vkdGK~~~V~gn~V~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~ 355 (635)
T PRK02888 276 FNIARIEEAVKAGKFKTIGGSKVPVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDD 355 (635)
T ss_pred EchHHHHHhhhCCCEEEECCCEEEEEECCccccCCcceEEEEECCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhh
Confidence 1245777776651 00112333445566778899999999999999999999999988553
Q ss_pred eE--------EecccccCCCCeeEEEEecCCceeee--ccceeEEEEeeC
Q psy14130 346 YI--------HFLNQSLSGAPQRGLGFMPKRGCDVT--QCEIFRFFKLHT 385 (494)
Q Consensus 346 ~~--------~~~~~~~~~~~v~~~~~~p~~~~~~~--~~~~~~~~~l~~ 385 (494)
.+ ....+...+......+|.++|....+ -|..+-.|++..
T Consensus 356 ~~~~~~~~~~~vvaevevGlGPLHTaFDg~G~aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 356 LFDGKIKPRDAVVAEPELGLGPLHTAFDGRGNAYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred hhhccCCccceEEEeeccCCCcceEEECCCCCEEEeEeecceeEEEehHH
Confidence 11 11222233444567889999876665 488899999876
|
|
| >KOG4649|consensus | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.029 Score=49.21 Aligned_cols=135 Identities=17% Similarity=0.131 Sum_probs=89.2
Q ss_pred cCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCC
Q psy14130 185 HPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTR 264 (494)
Q Consensus 185 ~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~ 264 (494)
-++...+++.||..+.+.--|..+|+.+..-. -..+|.+-+.- -|++++.|+..|.+.+.+..+|+....+..-...
T Consensus 19 ~~dskT~v~igSHs~~~~avd~~sG~~~We~i-lg~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~v- 95 (354)
T KOG4649|consen 19 CNDSKTLVVIGSHSGIVIAVDPQSGNLIWEAI-LGVRIECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETV- 95 (354)
T ss_pred ecCCceEEEEecCCceEEEecCCCCcEEeehh-hCceeeeeeEE-ECCEEEEEEccCcEEEEEecchhheeeeeehhhh-
Confidence 34445789999999999999999998765432 22334332222 4778999999999999999999877777655443
Q ss_pred ceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEE
Q psy14130 265 SSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLA 328 (494)
Q Consensus 265 ~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 328 (494)
-.+....++ +.++.+| +.|+..+..|.++.......+- ....-.+++.+|-...||++
T Consensus 96 k~~a~~d~~-~glIycg---shd~~~yalD~~~~~cVykskc--gG~~f~sP~i~~g~~sly~a 153 (354)
T KOG4649|consen 96 KVRAQCDFD-GGLIYCG---SHDGNFYALDPKTYGCVYKSKC--GGGTFVSPVIAPGDGSLYAA 153 (354)
T ss_pred ccceEEcCC-CceEEEe---cCCCcEEEecccccceEEeccc--CCceeccceecCCCceEEEE
Confidence 233444455 6677788 7999999999987554333211 12223345666633334343
|
|
| >PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.11 Score=49.97 Aligned_cols=149 Identities=17% Similarity=0.193 Sum_probs=83.0
Q ss_pred CCceEEEEEcCCCCEEEEEe--CC---CeEEEEeCCCCceEEEeeecCCCC---ceEEEEE-CCCCeEEEEEecCCCCce
Q psy14130 219 PDVINCLSFNRDGSRLVTTC--KD---KTVRVLDPRTGLVISQGVCHPGTR---SSKAVFI-GDTGRIVTTGFSRHSDRQ 289 (494)
Q Consensus 219 ~~~v~~l~~~~~~~~l~s~~--~d---~~v~iwd~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~l~~~g~~~~~d~~ 289 (494)
...+..+.|.+++..|+..- .+ ..+.++|..++............- .....+. +++..++.... +..-..
T Consensus 183 ~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~-~~G~~h 261 (353)
T PF00930_consen 183 DYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISE-RDGYRH 261 (353)
T ss_dssp SEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEE-TTSSEE
T ss_pred ccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCCcceeeecccccccCCCCEEEEEEE-cCCCcE
Confidence 34578899999988444333 22 347778888776443333222221 2355555 77777877772 223345
Q ss_pred EEEEeCCCCCCceeEeeecCCCceE-EeEEeCCCCEEEEEEeCCC--cEEEEEeeCC-CceEEecccccCCCCe-eEEEE
Q psy14130 290 VGLWDENDLNTPLALETVDSSSGVL-FPYYDHDTRILFLAGKGDG--NIRYYELTNE-RPYIHFLNQSLSGAPQ-RGLGF 364 (494)
Q Consensus 290 i~iwd~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~g~~dg--~i~~wd~~~~-~~~~~~~~~~~~~~~v-~~~~~ 364 (494)
|.+++..... +. ....+.-.|. .+.++++++.|+.++..++ .-.+|-+.-. ......+.. .... ..+.|
T Consensus 262 ly~~~~~~~~-~~--~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~~~~LT~---~~~~~~~~~~ 335 (353)
T PF00930_consen 262 LYLYDLDGGK-PR--QLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSGGEPKCLTC---EDGDHYSASF 335 (353)
T ss_dssp EEEEETTSSE-EE--ESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTETTEEEESST---TSSTTEEEEE
T ss_pred EEEEcccccc-ee--ccccCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCCCCeEeccC---CCCCceEEEE
Confidence 5566655432 11 1112334453 4789999999988887643 4555555443 222233332 2223 58999
Q ss_pred ecCCceeeec
Q psy14130 365 MPKRGCDVTQ 374 (494)
Q Consensus 365 ~p~~~~~~~~ 374 (494)
+|++.+++..
T Consensus 336 Spdg~y~v~~ 345 (353)
T PF00930_consen 336 SPDGKYYVDT 345 (353)
T ss_dssp -TTSSEEEEE
T ss_pred CCCCCEEEEE
Confidence 9999987764
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: |
| >PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.022 Score=54.23 Aligned_cols=192 Identities=11% Similarity=0.037 Sum_probs=90.6
Q ss_pred CcEEEEEcCCCCCCCCcccceEe--ccc--ccccEEEEEEcCCCCCEEEEEeC------CCeEEEEECCCCeEEEEecCC
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMD--LHG--HKRRVGYIEWHPTAENVVASAGF------DYLIILWDVGKGEALTVIDCH 218 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~--~~~--h~~~V~~~~~~p~~~~~l~s~s~------d~~v~iwd~~~~~~~~~~~~h 218 (494)
++|.|.|+.+....-.+.+.+.. +.. .-..-..+..-|+| .+++|+-. -|.+.+.|-++.+.+...+..
T Consensus 98 srIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G-~imIS~lGd~~G~g~Ggf~llD~~tf~v~g~We~~ 176 (461)
T PF05694_consen 98 SRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDG-RIMISALGDADGNGPGGFVLLDGETFEVKGRWEKD 176 (461)
T ss_dssp --EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS---EEEEEEEETTS-S--EEEEE-TTT--EEEE--SB
T ss_pred CcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCc-cEEEEeccCCCCCCCCcEEEEcCccccccceeccC
Confidence 35888888865433222221111 110 01122234445777 57777632 256888888877777666532
Q ss_pred ---CCceEEEEEcCCCCEEEEEeC--------------------CCeEEEEeCCCCceEEEeeecCCC-CceEEEEECC-
Q psy14130 219 ---PDVINCLSFNRDGSRLVTTCK--------------------DKTVRVLDPRTGLVISQGVCHPGT-RSSKAVFIGD- 273 (494)
Q Consensus 219 ---~~~v~~l~~~~~~~~l~s~~~--------------------d~~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~- 273 (494)
..--+.+-|.|..+.++|+.. ..++++||+.+.+.++++...... .+..+.|..+
T Consensus 177 ~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P 256 (461)
T PF05694_consen 177 RGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDP 256 (461)
T ss_dssp -TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SST
T ss_pred CCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCC
Confidence 233467888888888888753 358999999999999988654322 2445666544
Q ss_pred -CCeEEEEEecCCCCceEEEEeC-CCCCCcee-EeeecC------------------CCceEEeEEeCCCCEEEEEEeCC
Q psy14130 274 -TGRIVTTGFSRHSDRQVGLWDE-NDLNTPLA-LETVDS------------------SSGVLFPYYDHDTRILFLAGKGD 332 (494)
Q Consensus 274 -~~~l~~~g~~~~~d~~i~iwd~-~~~~~~~~-~~~~~~------------------~~~v~~~~~~~~~~~l~~~g~~d 332 (494)
...=++.+ .-..+|..|-- ....-... +..+.. ..-++.+..|.|.++||++.-.+
T Consensus 257 ~~~~gFvg~---aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~ 333 (461)
T PF05694_consen 257 DANYGFVGC---ALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDILISLDDRFLYVSNWLH 333 (461)
T ss_dssp T--EEEEEE---E--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------EEE-TTS-EEEEEETTT
T ss_pred CccceEEEE---eccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCceEeEEEccCCCEEEEEcccC
Confidence 33333332 13444444432 22211000 001100 12357789999999999999999
Q ss_pred CcEEEEEeeCCC
Q psy14130 333 GNIRYYELTNER 344 (494)
Q Consensus 333 g~i~~wd~~~~~ 344 (494)
|.|+.||+....
T Consensus 334 GdvrqYDISDP~ 345 (461)
T PF05694_consen 334 GDVRQYDISDPF 345 (461)
T ss_dssp TEEEEEE-SSTT
T ss_pred CcEEEEecCCCC
Confidence 999999998754
|
The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A. |
| >KOG2395|consensus | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.018 Score=55.48 Aligned_cols=133 Identities=17% Similarity=0.162 Sum_probs=87.4
Q ss_pred EEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCC--------CeEEEEEecCCCCceEEEEeCCCCCC-cee
Q psy14130 233 RLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDT--------GRIVTTGFSRHSDRQVGLWDENDLNT-PLA 303 (494)
Q Consensus 233 ~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~l~~~g~~~~~d~~i~iwd~~~~~~-~~~ 303 (494)
+|.++.....++-.|++.|+.+.++..+.. +.-+.+.|+. +.++ | -++..|.-||+|-... .+.
T Consensus 348 il~~~~~~~~l~klDIE~GKIVeEWk~~~d--i~mv~~t~d~K~~Ql~~e~Tlv--G---Ls~n~vfriDpRv~~~~kl~ 420 (644)
T KOG2395|consen 348 ILMDGGEQDKLYKLDIERGKIVEEWKFEDD--INMVDITPDFKFAQLTSEQTLV--G---LSDNSVFRIDPRVQGKNKLA 420 (644)
T ss_pred EeeCCCCcCcceeeecccceeeeEeeccCC--cceeeccCCcchhcccccccEE--e---ecCCceEEecccccCcceee
Confidence 344555667899999999999999998877 4555555542 2233 3 3588999999984332 111
Q ss_pred E-e--eecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccce
Q psy14130 304 L-E--TVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEI 377 (494)
Q Consensus 304 ~-~--~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~ 377 (494)
. + .......-.|.+-..+| ++ ++|+.+|.||+||- .+..-.+.++.+ +.+|..+..+.+|..+++.|.+
T Consensus 421 ~~q~kqy~~k~nFsc~aTT~sG-~I-vvgS~~GdIRLYdr-i~~~AKTAlPgL--G~~I~hVdvtadGKwil~Tc~t 492 (644)
T KOG2395|consen 421 VVQSKQYSTKNNFSCFATTESG-YI-VVGSLKGDIRLYDR-IGRRAKTALPGL--GDAIKHVDVTADGKWILATCKT 492 (644)
T ss_pred eeeccccccccccceeeecCCc-eE-EEeecCCcEEeehh-hhhhhhhccccc--CCceeeEEeeccCcEEEEeccc
Confidence 1 1 11122334444444443 45 78999999999997 444334444444 6889999999999988877554
|
|
| >PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.045 Score=50.69 Aligned_cols=147 Identities=18% Similarity=0.222 Sum_probs=91.5
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeE----
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLAL---- 304 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~---- 304 (494)
..++.|+.|+.+| +.+++........... +... +..+...++-+.+++.. |+.+.++++.........
T Consensus 5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~-~~~~-I~ql~vl~~~~~llvLs-----d~~l~~~~L~~l~~~~~~~~~~ 76 (275)
T PF00780_consen 5 SWGDRLLVGTEDG-LYVYDLSDPSKPTRIL-KLSS-ITQLSVLPELNLLLVLS-----DGQLYVYDLDSLEPVSTSAPLA 76 (275)
T ss_pred cCCCEEEEEECCC-EEEEEecCCccceeEe-ecce-EEEEEEecccCEEEEEc-----CCccEEEEchhhcccccccccc
Confidence 3578899999988 8999983333222222 2222 88899999877788776 799999998765443311
Q ss_pred --------eeecCCCceEEeE--EeCCCCEEEEEEeCCCcEEEEEeeCCCceE-EecccccCCCCeeEEEEecCCceeee
Q psy14130 305 --------ETVDSSSGVLFPY--YDHDTRILFLAGKGDGNIRYYELTNERPYI-HFLNQSLSGAPQRGLGFMPKRGCDVT 373 (494)
Q Consensus 305 --------~~~~~~~~v~~~~--~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~-~~~~~~~~~~~v~~~~~~p~~~~~~~ 373 (494)
.......++...+ -...+... ++......|.+|......... ....++.-...+.+++|.++..++..
T Consensus 77 ~~~~~~~~~~~~~~~~v~~f~~~~~~~~~~~-L~va~kk~i~i~~~~~~~~~f~~~~ke~~lp~~~~~i~~~~~~i~v~~ 155 (275)
T PF00780_consen 77 FPKSRSLPTKLPETKGVSFFAVNGGHEGSRR-LCVAVKKKILIYEWNDPRNSFSKLLKEISLPDPPSSIAFLGNKICVGT 155 (275)
T ss_pred ccccccccccccccCCeeEEeeccccccceE-EEEEECCEEEEEEEECCcccccceeEEEEcCCCcEEEEEeCCEEEEEe
Confidence 0222334455444 12233333 333355699999998753323 44555666788999999955444443
Q ss_pred ccceeEEEEeeC
Q psy14130 374 QCEIFRFFKLHT 385 (494)
Q Consensus 374 ~~~~~~~~~l~~ 385 (494)
.....+.++.+
T Consensus 156 -~~~f~~idl~~ 166 (275)
T PF00780_consen 156 -SKGFYLIDLNT 166 (275)
T ss_pred -CCceEEEecCC
Confidence 44567777775
|
These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity |
| >PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.21 Score=46.21 Aligned_cols=183 Identities=13% Similarity=0.073 Sum_probs=104.6
Q ss_pred CEEEEEeCCCeEEEEECCC-CeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEe-----------
Q psy14130 190 NVVASAGFDYLIILWDVGK-GEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQG----------- 257 (494)
Q Consensus 190 ~~l~s~s~d~~v~iwd~~~-~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~----------- 257 (494)
+.|+.|..+| +.++++.. .......+ ...|..+...++-+.|++-+ |+.+.++++..-......
T Consensus 8 ~~L~vGt~~G-l~~~~~~~~~~~~~i~~--~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~~~~ 83 (275)
T PF00780_consen 8 DRLLVGTEDG-LYVYDLSDPSKPTRILK--LSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKSRSL 83 (275)
T ss_pred CEEEEEECCC-EEEEEecCCccceeEee--cceEEEEEEecccCEEEEEc-CCccEEEEchhhccccccccccccccccc
Confidence 6888898888 89999833 33333332 33499999999877777665 599999998765433211
Q ss_pred --eecCCCCceEEE--EECCCCeEEEEEecCCCCceEEEEeCCCCCC-c-eeEeeecCCCceEEeEEeCCCCEEEEEEeC
Q psy14130 258 --VCHPGTRSSKAV--FIGDTGRIVTTGFSRHSDRQVGLWDENDLNT-P-LALETVDSSSGVLFPYYDHDTRILFLAGKG 331 (494)
Q Consensus 258 --~~~~~~~~~~~~--~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~-~-~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~ 331 (494)
.......+...+ -...+...++++ ..+.|.+|....... . .....+.....+..+.|. ++.+ +.|.
T Consensus 84 ~~~~~~~~~v~~f~~~~~~~~~~~L~va----~kk~i~i~~~~~~~~~f~~~~ke~~lp~~~~~i~~~--~~~i-~v~~- 155 (275)
T PF00780_consen 84 PTKLPETKGVSFFAVNGGHEGSRRLCVA----VKKKILIYEWNDPRNSFSKLLKEISLPDPPSSIAFL--GNKI-CVGT- 155 (275)
T ss_pred cccccccCCeeEEeeccccccceEEEEE----ECCEEEEEEEECCcccccceeEEEEcCCCcEEEEEe--CCEE-EEEe-
Confidence 011111122222 123345566666 466999998765322 1 344455566788888898 4455 4454
Q ss_pred CCcEEEEEeeCCCceEEeccccc---------CCCCeeEEEEecCCceeeeccceeEEEEeeC
Q psy14130 332 DGNIRYYELTNERPYIHFLNQSL---------SGAPQRGLGFMPKRGCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 332 dg~i~~wd~~~~~~~~~~~~~~~---------~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~~ 385 (494)
.....+.|+.++... .+..... .......+.-.+++.++++-++..-+.+...
T Consensus 156 ~~~f~~idl~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Ll~~~~~g~fv~~~G 217 (275)
T PF00780_consen 156 SKGFYLIDLNTGSPS-ELLDPSDSSSSFKSRNSSSKPLGIFQLSDNEFLLCYDNIGVFVNKNG 217 (275)
T ss_pred CCceEEEecCCCCce-EEeCccCCcchhhhcccCCCceEEEEeCCceEEEEecceEEEEcCCC
Confidence 455889999977652 2221110 0111233333345566666665555555433
|
These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity |
| >KOG2079|consensus | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0034 Score=65.24 Aligned_cols=107 Identities=20% Similarity=0.165 Sum_probs=75.2
Q ss_pred CeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEeccccc
Q psy14130 275 GRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSL 354 (494)
Q Consensus 275 ~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~ 354 (494)
+..++.| ++.|.+...|.+..-.+. ........+|.+++|+.+|+.+ +.|-.+|.|.+||+..++++..+.....
T Consensus 99 ~~~ivi~---Ts~ghvl~~d~~~nL~~~-~~ne~v~~~Vtsvafn~dg~~l-~~G~~~G~V~v~D~~~~k~l~~i~e~~a 173 (1206)
T KOG2079|consen 99 VVPIVIG---TSHGHVLLSDMTGNLGPL-HQNERVQGPVTSVAFNQDGSLL-LAGLGDGHVTVWDMHRAKILKVITEHGA 173 (1206)
T ss_pred eeeEEEE---cCchhhhhhhhhcccchh-hcCCccCCcceeeEecCCCcee-ccccCCCcEEEEEccCCcceeeeeecCC
Confidence 4466667 688889999887633332 2233455789999999999999 8999999999999999887544432222
Q ss_pred CCCCeeEEEEecCCceeeeccceeEEEEeeCC
Q psy14130 355 SGAPQRGLGFMPKRGCDVTQCEIFRFFKLHTT 386 (494)
Q Consensus 355 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~~~ 386 (494)
....+--+.+..++..+.++|.-..+|++.-+
T Consensus 174 p~t~vi~v~~t~~nS~llt~D~~Gsf~~lv~n 205 (1206)
T KOG2079|consen 174 PVTGVIFVGRTSQNSKLLTSDTGGSFWKLVFN 205 (1206)
T ss_pred ccceEEEEEEeCCCcEEEEccCCCceEEEEec
Confidence 22333344455566778888888889988653
|
|
| >COG3204 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.25 Score=44.51 Aligned_cols=167 Identities=10% Similarity=0.121 Sum_probs=109.0
Q ss_pred cccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecC-CCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy14130 172 LHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDC-HPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRT 250 (494)
Q Consensus 172 ~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~-h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~ 250 (494)
+.|-...|.++.|+|+. +.|++......-.+|=-.+|+.+.++.- .-...-.|.+..+|.+.++--.++.+.++-+..
T Consensus 81 i~g~~~nvS~LTynp~~-rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~ 159 (316)
T COG3204 81 ILGETANVSSLTYNPDT-RTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDA 159 (316)
T ss_pred cccccccccceeeCCCc-ceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcC
Confidence 34455569999999998 5777776666666776668888887652 122344678888888888888899999887766
Q ss_pred CceEEE-----ee----ecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee-cC-------CCce
Q psy14130 251 GLVISQ-----GV----CHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV-DS-------SSGV 313 (494)
Q Consensus 251 ~~~~~~-----~~----~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~-~~-------~~~v 313 (494)
+..+.. +. .+.+...-.++|.+.+.+++++= +-.-+.||.............. +. ...+
T Consensus 160 ~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aK----Er~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~Dv 235 (316)
T COG3204 160 DTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAK----ERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDV 235 (316)
T ss_pred CccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEE----ccCCcEEEEEecCCcccccccccCcccccceEeecc
Confidence 532211 11 12122267899999988888876 5666777765532222221111 01 1346
Q ss_pred EEeEEeCCCCEEEEEEeCCCcEEEEEeeCC
Q psy14130 314 LFPYYDHDTRILFLAGKGDGNIRYYELTNE 343 (494)
Q Consensus 314 ~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~ 343 (494)
..+.|++....|++-+.+++.+.-.|....
T Consensus 236 Sgl~~~~~~~~LLVLS~ESr~l~Evd~~G~ 265 (316)
T COG3204 236 SGLEFNAITNSLLVLSDESRRLLEVDLSGE 265 (316)
T ss_pred ccceecCCCCcEEEEecCCceEEEEecCCC
Confidence 678899888888787878887777776544
|
|
| >PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.081 Score=40.39 Aligned_cols=101 Identities=19% Similarity=0.332 Sum_probs=63.2
Q ss_pred eEEEEEcC---CC-CEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCC
Q psy14130 222 INCLSFNR---DG-SRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEND 297 (494)
Q Consensus 222 v~~l~~~~---~~-~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~ 297 (494)
|+++++.. || +.|+.||.|..||+|+= .+.+.++..+.. +..++.... + .++.| ..+|+|-+|+-..
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~--~e~~~Ei~e~~~--v~~L~~~~~-~-~F~Y~---l~NGTVGvY~~~~ 72 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKG--DEIVAEITETDK--VTSLCSLGG-G-RFAYA---LANGTVGVYDRSQ 72 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeC--CcEEEEEecccc--eEEEEEcCC-C-EEEEE---ecCCEEEEEeCcc
Confidence 56666554 33 58999999999999974 356666655443 677777665 3 35555 4899999998532
Q ss_pred CCCceeEeeecCCCceEEe-EEeCC--CCEEEEEEeCCCcEE
Q psy14130 298 LNTPLALETVDSSSGVLFP-YYDHD--TRILFLAGKGDGNIR 336 (494)
Q Consensus 298 ~~~~~~~~~~~~~~~v~~~-~~~~~--~~~l~~~g~~dg~i~ 336 (494)
. +........+.++ .|+.+ |..-+++|-.+|.|-
T Consensus 73 --R---lWRiKSK~~~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 73 --R---LWRIKSKNQVTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred --e---eeeeccCCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 1 2222233345544 33333 333338888888774
|
|
| >KOG1897|consensus | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.71 Score=48.48 Aligned_cols=175 Identities=9% Similarity=0.034 Sum_probs=105.4
Q ss_pred eEEEEECCCCeEEEEecC-CC---CceEEEEEcCC-CCEEEEEeC----------CCeEEEEeCCCCceEEEeeecC--C
Q psy14130 200 LIILWDVGKGEALTVIDC-HP---DVINCLSFNRD-GSRLVTTCK----------DKTVRVLDPRTGLVISQGVCHP--G 262 (494)
Q Consensus 200 ~v~iwd~~~~~~~~~~~~-h~---~~v~~l~~~~~-~~~l~s~~~----------d~~v~iwd~~~~~~~~~~~~~~--~ 262 (494)
.++++|-++-+.+...+- .. ..|.++.|..| +.+++.|.. .|+|.+|....++.+.....+. +
T Consensus 751 ~l~vlD~nTf~vl~~hef~~~E~~~Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v~G 830 (1096)
T KOG1897|consen 751 FLRVLDQNTFEVLSSHEFERNETALSIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVVKG 830 (1096)
T ss_pred EEEEecCCceeEEeeccccccceeeeeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeeecc
Confidence 467777666554433221 11 23555668887 677777753 5788888887744333332221 2
Q ss_pred CCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeC
Q psy14130 263 TRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTN 342 (494)
Q Consensus 263 ~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~ 342 (494)
. +..+.-. +++++++= +..|++|+..+.+.... .-.+..++..+...-.+..+ +.|.--++|.+--.+.
T Consensus 831 a-v~aL~~f--ngkllA~I-----n~~vrLye~t~~~eLr~--e~~~~~~~~aL~l~v~gdeI-~VgDlm~Sitll~y~~ 899 (1096)
T KOG1897|consen 831 A-VYALVEF--NGKLLAGI-----NQSVRLYEWTTERELRI--ECNISNPIIALDLQVKGDEI-AVGDLMRSITLLQYKG 899 (1096)
T ss_pred c-eeehhhh--CCeEEEec-----CcEEEEEEccccceehh--hhcccCCeEEEEEEecCcEE-EEeeccceEEEEEEec
Confidence 2 3333322 25666654 78899999887533222 22345677778888888888 7787778888777666
Q ss_pred CCceEEecccccCCCCeeEEEEecCCceeeec-cceeEEEEeeC
Q psy14130 343 ERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ-CEIFRFFKLHT 385 (494)
Q Consensus 343 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~-~~~~~~~~l~~ 385 (494)
.+.........-.+...+++.+..+..++.+. ++.+.+-+.+.
T Consensus 900 ~eg~f~evArD~~p~Wmtaveil~~d~ylgae~~gNlf~v~~d~ 943 (1096)
T KOG1897|consen 900 DEGNFEEVARDYNPNWMTAVEILDDDTYLGAENSGNLFTVRKDS 943 (1096)
T ss_pred cCCceEEeehhhCccceeeEEEecCceEEeecccccEEEEEecC
Confidence 55333344444446667888888777777664 66666655543
|
|
| >KOG3621|consensus | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.024 Score=56.48 Aligned_cols=201 Identities=13% Similarity=0.075 Sum_probs=121.9
Q ss_pred ccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEE-EecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc-
Q psy14130 175 HKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALT-VIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGL- 252 (494)
Q Consensus 175 h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~-~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~- 252 (494)
|...|.--++..++ .+++.|+.-|.+++++-..++... ...+-.+.+..+..+++..++|.|+..|.|.++-+..+.
T Consensus 32 ~~~~v~lTc~dst~-~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p 110 (726)
T KOG3621|consen 32 FPARVKLTCVDATE-EYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELP 110 (726)
T ss_pred CcceEEEEEeecCC-ceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCC
Confidence 44455555566666 699999999999999987765432 233345666778889889899999999999999887643
Q ss_pred --eEEEeeecC--CCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCC-CCcee-EeeecCCCceEEeEEeCCCCEEE
Q psy14130 253 --VISQGVCHP--GTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDL-NTPLA-LETVDSSSGVLFPYYDHDTRILF 326 (494)
Q Consensus 253 --~~~~~~~~~--~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~-~~~~~-~~~~~~~~~v~~~~~~~~~~~l~ 326 (494)
....-..+. +.+++++.|+++ +.-+.+| .+.|.|..-.+... ..... .......+.|..+.+. ..+|+
T Consensus 111 ~~~~~~t~~d~~~~~rVTal~Ws~~-~~k~ysG---D~~Gkv~~~~L~s~~~~~~~~q~il~~ds~IVQlD~~--q~~LL 184 (726)
T KOG3621|consen 111 RDLDYVTPCDKSHKCRVTALEWSKN-GMKLYSG---DSQGKVVLTELDSRQAFLSKSQEILSEDSEIVQLDYL--QSYLL 184 (726)
T ss_pred CcceeeccccccCCceEEEEEeccc-ccEEeec---CCCceEEEEEechhhhhccccceeeccCcceEEeecc--cceeh
Confidence 222222333 445999999999 5555566 68899988877651 00000 1111233456555543 34443
Q ss_pred EEEeCCCcEEEEEeeCCCceEEecccccCCC-CeeEEEEecCC-----ceeeeccceeEEEEeeCC
Q psy14130 327 LAGKGDGNIRYYELTNERPYIHFLNQSLSGA-PQRGLGFMPKR-----GCDVTQCEIFRFFKLHTT 386 (494)
Q Consensus 327 ~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~-~v~~~~~~p~~-----~~~~~~~~~~~~~~l~~~ 386 (494)
++...- -.+++++.+.. ..+......+ .--+.||.|.. ..++++---.|+|..+-.
T Consensus 185 VStl~r--~~Lc~tE~eti--~QIG~k~R~~~~~~GACF~~g~~~~q~~~IycaRPG~RlWead~~ 246 (726)
T KOG3621|consen 185 VSTLTR--CILCQTEAETI--TQIGKKPRKSLIDFGACFFPGQCKAQKPQIYCARPGLRLWEADFA 246 (726)
T ss_pred Hhhhhh--hheeecchhHH--HHhcCCCcCCccccceEEeeccccCCCceEEEecCCCceEEeecc
Confidence 544332 34555554431 1122211122 23567787752 356666666799988873
|
|
| >PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.48 Score=46.04 Aligned_cols=199 Identities=16% Similarity=0.180 Sum_probs=107.8
Q ss_pred cEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe-------------------------------------------EEEE
Q psy14130 178 RVGYIEWHPTAENVVASAGFDYLIILWDVGKGE-------------------------------------------ALTV 214 (494)
Q Consensus 178 ~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~-------------------------------------------~~~~ 214 (494)
.|+.+.|.++. .-|+.|...|.|.||.....+ +...
T Consensus 3 ~v~~vs~a~~t-~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l 81 (395)
T PF08596_consen 3 SVTHVSFAPET-LELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTL 81 (395)
T ss_dssp -EEEEEEETTT-TEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEE
T ss_pred eEEEEEecCCC-ceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhh
Confidence 47888998886 588888889998888653211 1112
Q ss_pred ecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeec-------CCCCceEEEEE----CCCC---eEEEE
Q psy14130 215 IDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCH-------PGTRSSKAVFI----GDTG---RIVTT 280 (494)
Q Consensus 215 ~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~-------~~~~~~~~~~~----~~~~---~l~~~ 280 (494)
++...++|++++.+.= -+++.|..+|.+.|.|+|....+..-... ....+..+.|. .+++ -++.+
T Consensus 82 ~~~~~g~vtal~~S~i-GFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~v 160 (395)
T PF08596_consen 82 LDAKQGPVTALKNSDI-GFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLV 160 (395)
T ss_dssp E---S-SEEEEEE-BT-SEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEE
T ss_pred eeccCCcEeEEecCCC-cEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEE
Confidence 2234588999999844 49999999999999999988876653221 22235556554 2223 46777
Q ss_pred EecCCCCceEEEEeCC-CCCCceeE--eee--cCCCceEEeE-EeCCC--------------------CEEEEEEeCCCc
Q psy14130 281 GFSRHSDRQVGLWDEN-DLNTPLAL--ETV--DSSSGVLFPY-YDHDT--------------------RILFLAGKGDGN 334 (494)
Q Consensus 281 g~~~~~d~~i~iwd~~-~~~~~~~~--~~~--~~~~~v~~~~-~~~~~--------------------~~l~~~g~~dg~ 334 (494)
| ...|.+.+|.+. ........ ... .+...+..+. ++.+. +.+ +....+..
T Consensus 161 G---Tn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~-vVvvSe~~ 236 (395)
T PF08596_consen 161 G---TNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGY-VVVVSESD 236 (395)
T ss_dssp E---ETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EE-EEEE-SSE
T ss_pred E---eCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcE-EEEEcccc
Confidence 7 578999999764 11111111 111 1223333322 32221 122 23345778
Q ss_pred EEEEEeeCCCceEEecccccCCCCeeEEEEec-----CCceeee--ccceeEEEEeeC
Q psy14130 335 IRYYELTNERPYIHFLNQSLSGAPQRGLGFMP-----KRGCDVT--QCEIFRFFKLHT 385 (494)
Q Consensus 335 i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p-----~~~~~~~--~~~~~~~~~l~~ 385 (494)
|+++...+.+...+.. .......++++.+ .+.++++ +++.+++|.|-.
T Consensus 237 irv~~~~~~k~~~K~~---~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~ 291 (395)
T PF08596_consen 237 IRVFKPPKSKGAHKSF---DDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPS 291 (395)
T ss_dssp EEEE-TT---EEEEE----SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT
T ss_pred eEEEeCCCCcccceee---ccccccceEEEEeecccCCceEEEEEECCCcEEEEECCC
Confidence 9999998877543333 2223345566642 3444443 699999999876
|
The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A. |
| >KOG2079|consensus | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.021 Score=59.62 Aligned_cols=71 Identities=15% Similarity=0.236 Sum_probs=57.1
Q ss_pred ccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEE---EEEcCCCCEEEEEeCCCeEEEEeC
Q psy14130 175 HKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINC---LSFNRDGSRLVTTCKDKTVRVLDP 248 (494)
Q Consensus 175 h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~---l~~~~~~~~l~s~~~d~~v~iwd~ 248 (494)
-.++|++++|+.+| .+++.|-.+|.|.+||...++.++.+..|..+.++ +.+..+++.++++...|. +|.+
T Consensus 129 v~~~Vtsvafn~dg-~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~vi~v~~t~~nS~llt~D~~Gs--f~~l 202 (1206)
T KOG2079|consen 129 VQGPVTSVAFNQDG-SLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTGVIFVGRTSQNSKLLTSDTGGS--FWKL 202 (1206)
T ss_pred cCCcceeeEecCCC-ceeccccCCCcEEEEEccCCcceeeeeecCCccceEEEEEEeCCCcEEEEccCCCc--eEEE
Confidence 46789999999998 79999999999999999999988888776665554 344556778888887776 5554
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.95 Score=47.74 Aligned_cols=200 Identities=12% Similarity=0.079 Sum_probs=101.3
Q ss_pred ccEEEEEEcCCCCCEEEEEeCCC----eEEEEECCCCeEEEE-ecCCCCceEEEEEcCCCCEEEEEeCC------CeEEE
Q psy14130 177 RRVGYIEWHPTAENVVASAGFDY----LIILWDVGKGEALTV-IDCHPDVINCLSFNRDGSRLVTTCKD------KTVRV 245 (494)
Q Consensus 177 ~~V~~~~~~p~~~~~l~s~s~d~----~v~iwd~~~~~~~~~-~~~h~~~v~~l~~~~~~~~l~s~~~d------~~v~i 245 (494)
-.+..+.|+|++..++++.+.+| .|++.|+.++..+.. +.+ .-..++|.+|++.|+.+..+ ..|..
T Consensus 127 ~~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~---~~~~~~w~~D~~~~~y~~~~~~~~~~~~v~~ 203 (686)
T PRK10115 127 YTLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDN---VEPSFVWANDSWTFYYVRKHPVTLLPYQVWR 203 (686)
T ss_pred EEEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccC---cceEEEEeeCCCEEEEEEecCCCCCCCEEEE
Confidence 34677889999853444433333 688999988863322 221 12569999998866655432 36888
Q ss_pred EeCCCC--ceEEEeeecCCCCceEEEEEC-CCCeEEEEEecCCCCceEEEEeCCCCC-CceeEeeecCCCceEEeEEeCC
Q psy14130 246 LDPRTG--LVISQGVCHPGTRSSKAVFIG-DTGRIVTTGFSRHSDRQVGLWDENDLN-TPLALETVDSSSGVLFPYYDHD 321 (494)
Q Consensus 246 wd~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~g~~~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~v~~~~~~~~ 321 (494)
+++.++ +-...+...... ..-..+.+ ++..++ ...+...++.+.+++..... .+..... ....+..-..+..
T Consensus 204 h~lgt~~~~d~lv~~e~~~~-~~~~~~~s~d~~~l~-i~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 279 (686)
T PRK10115 204 HTIGTPASQDELVYEEKDDT-FYVSLHKTTSKHYVV-IHLASATTSEVLLLDAELADAEPFVFLP--RRKDHEYSLDHYQ 279 (686)
T ss_pred EECCCChhHCeEEEeeCCCC-EEEEEEEcCCCCEEE-EEEECCccccEEEEECcCCCCCceEEEE--CCCCCEEEEEeCC
Confidence 888888 333333332222 22233444 545555 44344556789999954321 1222211 2222221112333
Q ss_pred CCEEEEEEeC-CCcEEEE--EeeCCCceEEecccccCCCCeeEEEEecCCceeee-ccceeEEEEeeC
Q psy14130 322 TRILFLAGKG-DGNIRYY--ELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVT-QCEIFRFFKLHT 385 (494)
Q Consensus 322 ~~~l~~~g~~-dg~i~~w--d~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~-~~~~~~~~~l~~ 385 (494)
..+++.... ....++. ++........++ .......+.++.+..+..++.. .++..+++.+..
T Consensus 280 -~~ly~~tn~~~~~~~l~~~~~~~~~~~~~l~-~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~~~~~ 345 (686)
T PRK10115 280 -HRFYLRSNRHGKNFGLYRTRVRDEQQWEELI-PPRENIMLEGFTLFTDWLVVEERQRGLTSLRQINR 345 (686)
T ss_pred -CEEEEEEcCCCCCceEEEecCCCcccCeEEE-CCCCCCEEEEEEEECCEEEEEEEeCCEEEEEEEcC
Confidence 444444332 2333444 443211112222 2222346888888855333333 266777776654
|
|
| >KOG4640|consensus | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0094 Score=58.55 Aligned_cols=96 Identities=13% Similarity=0.150 Sum_probs=75.3
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCC
Q psy14130 219 PDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDL 298 (494)
Q Consensus 219 ~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~ 298 (494)
.-.|.-+.|+|.-.+||.+..+|.|.+..+. .+.+.++..|......+++|.|+ ++++++|| .||+|++.|+.++
T Consensus 20 ~~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~D-GkllaVg~---kdG~I~L~Dve~~ 94 (665)
T KOG4640|consen 20 PINIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPD-GKLLAVGF---KDGTIRLHDVEKG 94 (665)
T ss_pred ccceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCC-CCEEEEEe---cCCeEEEEEccCC
Confidence 4567789999999999999999999999988 77788888676663349999999 89999996 8999999999886
Q ss_pred CCceeEeeecCCCceEEeEEeC
Q psy14130 299 NTPLALETVDSSSGVLFPYYDH 320 (494)
Q Consensus 299 ~~~~~~~~~~~~~~v~~~~~~~ 320 (494)
...... .......|.++.|++
T Consensus 95 ~~l~~~-~~s~e~~is~~~w~~ 115 (665)
T KOG4640|consen 95 GRLVSF-LFSVETDISKGIWDR 115 (665)
T ss_pred Cceecc-ccccccchheeeccc
Confidence 553321 123445677777764
|
|
| >PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.68 Score=45.75 Aligned_cols=198 Identities=13% Similarity=0.139 Sum_probs=109.7
Q ss_pred CCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCCCCcccceEe-cccccccEEEEEEcCCCCCEEEEEeCC-------
Q psy14130 127 NPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMD-LHGHKRRVGYIEWHPTAENVVASAGFD------- 198 (494)
Q Consensus 127 ~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~-~~~h~~~V~~~~~~p~~~~~l~s~s~d------- 198 (494)
+.+++++.....|+... .+++.|+.++. .+.. +.. ..-..+.|.+++..++.+...+
T Consensus 134 dg~~la~~~s~~G~e~~------~l~v~Dl~tg~-------~l~d~i~~--~~~~~~~W~~d~~~~~y~~~~~~~~~~~~ 198 (414)
T PF02897_consen 134 DGKRLAYSLSDGGSEWY------TLRVFDLETGK-------FLPDGIEN--PKFSSVSWSDDGKGFFYTRFDEDQRTSDS 198 (414)
T ss_dssp TSSEEEEEEEETTSSEE------EEEEEETTTTE-------EEEEEEEE--EESEEEEECTTSSEEEEEECSTTTSS-CC
T ss_pred CCCEEEEEecCCCCceE------EEEEEECCCCc-------CcCCcccc--cccceEEEeCCCCEEEEEEeCcccccccC
Confidence 44556666655555432 59999999983 2221 111 1122499999985455555322
Q ss_pred ---CeEEEEECCCCeE--EEEecCCCCc--eEEEEEcCCCCEEEEEeC---C-CeEEEEeCCCC----ceEEEeeecCCC
Q psy14130 199 ---YLIILWDVGKGEA--LTVIDCHPDV--INCLSFNRDGSRLVTTCK---D-KTVRVLDPRTG----LVISQGVCHPGT 263 (494)
Q Consensus 199 ---~~v~iwd~~~~~~--~~~~~~h~~~--v~~l~~~~~~~~l~s~~~---d-~~v~iwd~~~~----~~~~~~~~~~~~ 263 (494)
..|+.|.+.+... ...+...... ...+..++|+++|+..+. + ..+.+.|+..+ .....+..+...
T Consensus 199 ~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~ 278 (414)
T PF02897_consen 199 GYPRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDG 278 (414)
T ss_dssp GCCEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS
T ss_pred CCCcEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCc
Confidence 3488889877642 3445443333 678899999998775442 2 45888898875 233344433333
Q ss_pred CceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCce-eEeeecCCCceEEeEEeCCCCEEEEEEeCCCc--EEEEEe
Q psy14130 264 RSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPL-ALETVDSSSGVLFPYYDHDTRILFLAGKGDGN--IRYYEL 340 (494)
Q Consensus 264 ~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~--i~~wd~ 340 (494)
....+... ++.++.........+.|.-.++.+..... ......+...+.-..+...+.+|++....++. |+++++
T Consensus 279 ~~~~v~~~--~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~Lvl~~~~~~~~~l~v~~~ 356 (414)
T PF02897_consen 279 VEYYVDHH--GDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSLFKDYLVLSYRENGSSRLRVYDL 356 (414)
T ss_dssp -EEEEEEE--TTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEEETTEEEEEEEETTEEEEEEEET
T ss_pred eEEEEEcc--CCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEEECCEEEEEEEECCccEEEEEEC
Confidence 12333333 35555544233456778888887755311 11233344444445556677788777776665 777887
Q ss_pred e
Q psy14130 341 T 341 (494)
Q Consensus 341 ~ 341 (494)
.
T Consensus 357 ~ 357 (414)
T PF02897_consen 357 D 357 (414)
T ss_dssp T
T ss_pred C
Confidence 7
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A .... |
| >TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118 | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.43 Score=43.41 Aligned_cols=201 Identities=13% Similarity=0.129 Sum_probs=119.4
Q ss_pred EEEEEEcCCCCCEEEEEeCCCeEEEEECC------CCe-EEEEecC-----CCCceEEEEEcCCCC------------EE
Q psy14130 179 VGYIEWHPTAENVVASAGFDYLIILWDVG------KGE-ALTVIDC-----HPDVINCLSFNRDGS------------RL 234 (494)
Q Consensus 179 V~~~~~~p~~~~~l~s~s~d~~v~iwd~~------~~~-~~~~~~~-----h~~~v~~l~~~~~~~------------~l 234 (494)
-..|+++|.+ .+-++....+...+||.. ..+ .+.++.. .....+.+.|+.... .+
T Consensus 25 ~WGia~~p~~-~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~F 103 (336)
T TIGR03118 25 AWGLSYRPGG-PFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSRF 103 (336)
T ss_pred cceeEecCCC-CEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccceeE
Confidence 4689999998 577777778899999986 122 2333332 234678888885433 36
Q ss_pred EEEeCCCeEEEEeCCCCce-----EEEeeec-CCCCceEEEEE--CCCCeEEEEEecCCCCceEEEEeCCCCCC------
Q psy14130 235 VTTCKDKTVRVLDPRTGLV-----ISQGVCH-PGTRSSKAVFI--GDTGRIVTTGFSRHSDRQVGLWDENDLNT------ 300 (494)
Q Consensus 235 ~s~~~d~~v~iwd~~~~~~-----~~~~~~~-~~~~~~~~~~~--~~~~~l~~~g~~~~~d~~i~iwd~~~~~~------ 300 (494)
+.++.||+|.-|...-+.. ...+... .+..-..++.. ..+..|+++-| ..++|.+||-.=...
T Consensus 104 if~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF---~~g~IDVFd~~f~~~~~~g~F 180 (336)
T TIGR03118 104 LFVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANF---RQGRIDVFKGSFRPPPLPGSF 180 (336)
T ss_pred EEEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEecc---CCCceEEecCccccccCCCCc
Confidence 7788999999998644332 1122111 23322333333 23568888886 789999998542111
Q ss_pred ----------ceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEec----
Q psy14130 301 ----------PLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMP---- 366 (494)
Q Consensus 301 ----------~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p---- 366 (494)
|.-++.+...--|+-..-+++...= +.|.+-|.|-+||+.. +.++++... ..-...++++..|
T Consensus 181 ~DP~iPagyAPFnIqnig~~lyVtYA~qd~~~~d~-v~G~G~G~VdvFd~~G-~l~~r~as~-g~LNaPWG~a~APa~FG 257 (336)
T TIGR03118 181 IDPALPAGYAPFNVQNLGGTLYVTYAQQDADRNDE-VAGAGLGYVNVFTLNG-QLLRRVASS-GRLNAPWGLAIAPESFG 257 (336)
T ss_pred cCCCCCCCCCCcceEEECCeEEEEEEecCCccccc-ccCCCcceEEEEcCCC-cEEEEeccC-CcccCCceeeeChhhhC
Confidence 1111222211122222233444333 5566778999999764 443444332 2235578899877
Q ss_pred --CCceeee--ccceeEEEEeeCC
Q psy14130 367 --KRGCDVT--QCEIFRFFKLHTT 386 (494)
Q Consensus 367 --~~~~~~~--~~~~~~~~~l~~~ 386 (494)
.+.+++. +|+.|..||..++
T Consensus 258 ~~sg~lLVGNFGDG~InaFD~~sG 281 (336)
T TIGR03118 258 SLSGALLVGNFGDGTINAYDPQSG 281 (336)
T ss_pred CCCCCeEEeecCCceeEEecCCCC
Confidence 3567776 4999999998763
|
This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus. |
| >PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.54 Score=46.41 Aligned_cols=191 Identities=16% Similarity=0.137 Sum_probs=92.0
Q ss_pred CCcEEEEEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCC
Q psy14130 139 GGGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCH 218 (494)
Q Consensus 139 ~~g~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h 218 (494)
.+..++|++.+.-.|+..... .. . ..+.-....|.+.+ .+|+-...++|.|+.--+.+....++.
T Consensus 43 ngr~v~V~g~geY~iyt~~~~-------r~--k---~~G~g~~~vw~~~n--~yAv~~~~~~I~I~kn~~~~~~k~i~~- 107 (443)
T PF04053_consen 43 NGRFVLVCGDGEYEIYTALAW-------RN--K---AFGSGLSFVWSSRN--RYAVLESSSTIKIYKNFKNEVVKSIKL- 107 (443)
T ss_dssp TSSEEEEEETTEEEEEETTTT-------EE--E---EEEE-SEEEE-TSS--EEEEE-TTS-EEEEETTEE-TT------
T ss_pred CCCEEEEEcCCEEEEEEccCC-------cc--c---ccCceeEEEEecCc--cEEEEECCCeEEEEEcCccccceEEcC-
Confidence 344555555566667763221 11 1 22344578898854 577777788999964322222223332
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCC
Q psy14130 219 PDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDL 298 (494)
Q Consensus 219 ~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~ 298 (494)
...+..|-. |.+|+..+.+ .|.+||..+++.++++.... +..+.|++++..+..++ +..+.|++....
T Consensus 108 ~~~~~~If~---G~LL~~~~~~-~i~~yDw~~~~~i~~i~v~~---vk~V~Ws~~g~~val~t-----~~~i~il~~~~~ 175 (443)
T PF04053_consen 108 PFSVEKIFG---GNLLGVKSSD-FICFYDWETGKLIRRIDVSA---VKYVIWSDDGELVALVT-----KDSIYILKYNLE 175 (443)
T ss_dssp SS-EEEEE----SSSEEEEETT-EEEEE-TTT--EEEEESS-E----EEEEE-TTSSEEEEE------S-SEEEEEE-HH
T ss_pred CcccceEEc---CcEEEEECCC-CEEEEEhhHcceeeEEecCC---CcEEEEECCCCEEEEEe-----CCeEEEEEecch
Confidence 123344422 7777777655 89999999999999887542 68899999855555554 567788764321
Q ss_pred --------CCceeEeeecC-CCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEec
Q psy14130 299 --------NTPLALETVDS-SSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMP 366 (494)
Q Consensus 299 --------~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p 366 (494)
.....+..... ...|.+.+|.-+ -++ .+. .. .|+. +..|+. ..+... ..++.=+...|
T Consensus 176 ~~~~~~~~g~e~~f~~~~E~~~~IkSg~W~~d-~fi-YtT-~~-~lkY--l~~Ge~--~~i~~l--d~~~yllgy~~ 242 (443)
T PF04053_consen 176 AVAAIPEEGVEDAFELIHEISERIKSGCWVED-CFI-YTT-SN-HLKY--LVNGET--GIIAHL--DKPLYLLGYLP 242 (443)
T ss_dssp HHHHBTTTB-GGGEEEEEEE-S--SEEEEETT-EEE-EE--TT-EEEE--EETTEE--EEEEE---SS--EEEEEET
T ss_pred hcccccccCchhceEEEEEecceeEEEEEEcC-EEE-EEc-CC-eEEE--EEcCCc--ceEEEc--CCceEEEEEEc
Confidence 00001122212 457888888766 333 332 22 6666 555542 222222 23455556666
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B. |
| >KOG3621|consensus | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.017 Score=57.59 Aligned_cols=119 Identities=13% Similarity=0.140 Sum_probs=85.0
Q ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEE-EeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCC
Q psy14130 218 HPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVIS-QGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEN 296 (494)
Q Consensus 218 h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~ 296 (494)
+...|.--+++..+++++.|+.-|.+.+|+-..++... ...+..+. +..+..++. .+++++| +..|.|.++-+.
T Consensus 32 ~~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~-~~~~~vs~~-e~lvAag---t~~g~V~v~ql~ 106 (726)
T KOG3621|consen 32 FPARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGI-TCVRSVSSV-EYLVAAG---TASGRVSVFQLN 106 (726)
T ss_pred CcceEEEEEeecCCceEEEecccceEEEEecCchhhhcccccCccce-EEEEEecch-hHhhhhh---cCCceEEeehhh
Confidence 44555556677789999999999999999987776332 22222232 344444444 7888888 789999999887
Q ss_pred CCCCceeE--ee--ecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeC
Q psy14130 297 DLNTPLAL--ET--VDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTN 342 (494)
Q Consensus 297 ~~~~~~~~--~~--~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~ 342 (494)
....+... .. ..|...|++++|++++..+ .+|..-|.|.+-.+..
T Consensus 107 ~~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~-ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 107 KELPRDLDYVTPCDKSHKCRVTALEWSKNGMKL-YSGDSQGKVVLTELDS 155 (726)
T ss_pred ccCCCcceeeccccccCCceEEEEEecccccEE-eecCCCceEEEEEech
Confidence 63322221 11 1246789999999999999 8899999999988877
|
|
| >PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.71 Score=43.92 Aligned_cols=176 Identities=16% Similarity=0.187 Sum_probs=87.9
Q ss_pred EEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeC---CC-eEEEEECCC-CeEEEEecCCC--CceE
Q psy14130 151 VKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGF---DY-LIILWDVGK-GEALTVIDCHP--DVIN 223 (494)
Q Consensus 151 v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~---d~-~v~iwd~~~-~~~~~~~~~h~--~~v~ 223 (494)
|.--|+.++ +. ..+..-...+..+.|+|..+.+|+-|-+ |. .-|||-+++ +.....+..+. ..+.
T Consensus 170 i~~idl~tG-------~~-~~v~~~~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~~e~~g 241 (386)
T PF14583_consen 170 IFTIDLKTG-------ER-KVVFEDTDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRMEGESVG 241 (386)
T ss_dssp EEEEETTT---------E-EEEEEESS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS---EESS---TTEEEE
T ss_pred EEEEECCCC-------ce-eEEEecCccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCcceeeecCCCCcccc
Confidence 555666666 22 2233356678899999998778887754 22 236666543 33444443332 3344
Q ss_pred EEEEcCCCCEEEEEe-----CCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCC-----------
Q psy14130 224 CLSFNRDGSRLVTTC-----KDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSD----------- 287 (494)
Q Consensus 224 ~l~~~~~~~~l~s~~-----~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d----------- 287 (494)
.=-|.|||+.|.--+ .+..|.-+|+.+++....... .. ......+++ +.|++.- +.|
T Consensus 242 HEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~~~~~~~~~--p~-~~H~~ss~D-g~L~vGD---G~d~p~~v~~~~~~ 314 (386)
T PF14583_consen 242 HEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDTGERRRLMEM--PW-CSHFMSSPD-GKLFVGD---GGDAPVDVADAGGY 314 (386)
T ss_dssp EEEE-TTSS-EEEEEEETTT--EEEEEE-TTT--EEEEEEE---S-EEEEEE-TT-SSEEEEE---E-------------
T ss_pred cccccCCCCEEEEEeecCCCCceEEEeeCCCCCCceEEEeC--Cc-eeeeEEcCC-CCEEEec---CCCCCccccccccc
Confidence 556999999776533 255688889998875432222 12 345555566 5666553 122
Q ss_pred -----ceEEEEeCCCCCCceeEee-------ecCCCc--eEEeEEeCCCCEEEEEEeCCCcEEEEEeeC
Q psy14130 288 -----RQVGLWDENDLNTPLALET-------VDSSSG--VLFPYYDHDTRILFLAGKGDGNIRYYELTN 342 (494)
Q Consensus 288 -----~~i~iwd~~~~~~~~~~~~-------~~~~~~--v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~ 342 (494)
..|+++++..... ..+.. ..+... =..+.|+||+++++.++...|...||=++-
T Consensus 315 ~~~~~p~i~~~~~~~~~~-~~l~~h~~sw~v~~~~~q~~hPhp~FSPDgk~VlF~Sd~~G~~~vY~v~i 382 (386)
T PF14583_consen 315 KIENDPWIYLFDVEAGRF-RKLARHDTSWKVLDGDRQVTHPHPSFSPDGKWVLFRSDMEGPPAVYLVEI 382 (386)
T ss_dssp ------EEEEEETTTTEE-EEEEE-------BTTBSSTT----EE-TTSSEEEEEE-TTSS-EEEEEE-
T ss_pred eecCCcEEEEeccccCce-eeeeeccCcceeecCCCccCCCCCccCCCCCEEEEECCCCCCccEEEEeC
Confidence 2566777765332 11111 111111 245799999999989998999988886653
|
|
| >PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.4 Score=47.09 Aligned_cols=48 Identities=29% Similarity=0.361 Sum_probs=37.1
Q ss_pred eEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCC
Q psy14130 200 LIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPR 249 (494)
Q Consensus 200 ~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~ 249 (494)
.|.+|+. .|+.+.++.--.+.|.++.|+.+. .|+....||.+++||+.
T Consensus 62 ~I~iys~-sG~ll~~i~w~~~~iv~~~wt~~e-~LvvV~~dG~v~vy~~~ 109 (410)
T PF04841_consen 62 SIQIYSS-SGKLLSSIPWDSGRIVGMGWTDDE-ELVVVQSDGTVRVYDLF 109 (410)
T ss_pred EEEEECC-CCCEeEEEEECCCCEEEEEECCCC-eEEEEEcCCEEEEEeCC
Confidence 5999997 466666654333899999999754 56677799999999987
|
Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm |
| >KOG3630|consensus | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.043 Score=57.83 Aligned_cols=104 Identities=13% Similarity=0.043 Sum_probs=74.3
Q ss_pred cccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe-EEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceE
Q psy14130 176 KRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE-ALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVI 254 (494)
Q Consensus 176 ~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~-~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~ 254 (494)
..-+.++.|+|.-....+.+..|+.|++..+.... .+..+. -....++++|+|.|+.++.|-..|++.-|-.. .+..
T Consensus 155 ~vf~~~~~wnP~vp~n~av~l~dlsl~V~~~~~~~~~v~s~p-~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~-leik 232 (1405)
T KOG3630|consen 155 PVFQLKNVWNPLVPLNSAVDLSDLSLRVKSTKQLAQNVTSFP-VTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPS-LEIK 232 (1405)
T ss_pred ccccccccccCCccchhhhhccccchhhhhhhhhhhhhcccC-cccceeeEEeccccceeeEecCCCeEEEeecc-ccee
Confidence 34567899999876677888889999988775432 222333 45678999999999999999999999999875 3333
Q ss_pred EEeee---cCCCCceEEEEECCCCeEEEEE
Q psy14130 255 SQGVC---HPGTRSSKAVFIGDTGRIVTTG 281 (494)
Q Consensus 255 ~~~~~---~~~~~~~~~~~~~~~~~l~~~g 281 (494)
..+.+ ....++.+++|......+++-+
T Consensus 233 ~~ip~Pp~~e~yrvl~v~Wl~t~eflvvy~ 262 (1405)
T KOG3630|consen 233 SEIPEPPVEENYRVLSVTWLSTQEFLVVYG 262 (1405)
T ss_pred ecccCCCcCCCcceeEEEEecceeEEEEec
Confidence 33322 2234588999998855555544
|
|
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.71 Score=43.14 Aligned_cols=180 Identities=17% Similarity=0.145 Sum_probs=98.5
Q ss_pred CCcEEEEEEcCcEEEEEcCCCCCCCCcccceEecccc-cccEEEEEEcCCCCCEEEEEeC-----------CCeEEEEEC
Q psy14130 139 GGGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGH-KRRVGYIEWHPTAENVVASAGF-----------DYLIILWDV 206 (494)
Q Consensus 139 ~~g~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h-~~~V~~~~~~p~~~~~l~s~s~-----------d~~v~iwd~ 206 (494)
.+|.++++.. .+.+++.+++.....+... ..+. ...-+.+...|+| .+.++... -|.|+..|.
T Consensus 76 ~~g~Lv~~~~-g~~~~~~~~~~~~t~~~~~---~~~~~~~r~ND~~v~pdG-~~wfgt~~~~~~~~~~~~~~G~lyr~~p 150 (307)
T COG3386 76 AGGRLIACEH-GVRLLDPDTGGKITLLAEP---EDGLPLNRPNDGVVDPDG-RIWFGDMGYFDLGKSEERPTGSLYRVDP 150 (307)
T ss_pred CCCeEEEEcc-ccEEEeccCCceeEEeccc---cCCCCcCCCCceeEcCCC-CEEEeCCCccccCccccCCcceEEEEcC
Confidence 3444444433 3677777555331111111 1111 1345678888998 44444333 133444454
Q ss_pred CCCeEEEEecCCCCceEEEEEcCCCCEEEEEeC-CCeEEEEeCCC--Cc---e--EEEeeecCCCCceEEEEECCCCeEE
Q psy14130 207 GKGEALTVIDCHPDVINCLSFNRDGSRLVTTCK-DKTVRVLDPRT--GL---V--ISQGVCHPGTRSSKAVFIGDTGRIV 278 (494)
Q Consensus 207 ~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~-d~~v~iwd~~~--~~---~--~~~~~~~~~~~~~~~~~~~~~~~l~ 278 (494)
.+..+..+..+-..-++|+||||++.|+.+.. .+.|.-|++.. +. . ...+....+. .-.++...+ +.+.
T Consensus 151 -~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~-PDG~~vDad-G~lw 227 (307)
T COG3386 151 -DGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGL-PDGMAVDAD-GNLW 227 (307)
T ss_pred -CCCEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCC-CCceEEeCC-CCEE
Confidence 45666666666666788999999987777665 47888887752 21 1 1112222232 455555556 5555
Q ss_pred EEEecCCCCc-eEEEEeCCCCCCceeEeeecCCCceEEeEE-eCCCCEEEEEEeCC
Q psy14130 279 TTGFSRHSDR-QVGLWDENDLNTPLALETVDSSSGVLFPYY-DHDTRILFLAGKGD 332 (494)
Q Consensus 279 ~~g~~~~~d~-~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~l~~~g~~d 332 (494)
+++ ..+| .|.+|+.. ++. .....+.. ..+.+++| .|+.+.||+++...
T Consensus 228 ~~a---~~~g~~v~~~~pd-G~l-~~~i~lP~-~~~t~~~FgG~~~~~L~iTs~~~ 277 (307)
T COG3386 228 VAA---VWGGGRVVRFNPD-GKL-LGEIKLPV-KRPTNPAFGGPDLNTLYITSARS 277 (307)
T ss_pred Eec---ccCCceEEEECCC-CcE-EEEEECCC-CCCccceEeCCCcCEEEEEecCC
Confidence 444 2343 89999987 333 33333332 45555555 56678888887554
|
|
| >PHA02713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.13 Score=52.70 Aligned_cols=146 Identities=10% Similarity=0.017 Sum_probs=75.5
Q ss_pred CEEEEEeCCC-----eEEEEECCCCeEEE--EecCCCCceEEEEEcCCCCEEEEEeCC----------------------
Q psy14130 190 NVVASAGFDY-----LIILWDVGKGEALT--VIDCHPDVINCLSFNRDGSRLVTTCKD---------------------- 240 (494)
Q Consensus 190 ~~l~s~s~d~-----~v~iwd~~~~~~~~--~~~~h~~~v~~l~~~~~~~~l~s~~~d---------------------- 240 (494)
.+.+.|+.++ ++..||..+.+-.. .+.........+.. +|...+.|+.+
T Consensus 353 ~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r~~~~~~~~--~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~ 430 (557)
T PHA02713 353 TIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSSYGMCVL--DQYIYIIGGRTEHIDYTSVHHMNSIDMEEDTHS 430 (557)
T ss_pred EEEEECCcCCCCCCceEEEEECCCCeEEECCCCCcccccccEEEE--CCEEEEEeCCCcccccccccccccccccccccc
Confidence 6778888754 48889988764322 12211111112222 57777777754
Q ss_pred -CeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCC------ceEEEEeCCC-CCCceeEeeecCCCc
Q psy14130 241 -KTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSD------RQVGLWDEND-LNTPLALETVDSSSG 312 (494)
Q Consensus 241 -~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d------~~i~iwd~~~-~~~~~~~~~~~~~~~ 312 (494)
..+..||+++.+-...-..........++.. + +.|++.| +.+ ..+..||.++ ..-. ..........
T Consensus 431 ~~~ve~YDP~td~W~~v~~m~~~r~~~~~~~~-~-~~IYv~G---G~~~~~~~~~~ve~Ydp~~~~~W~-~~~~m~~~r~ 504 (557)
T PHA02713 431 SNKVIRYDTVNNIWETLPNFWTGTIRPGVVSH-K-DDIYVVC---DIKDEKNVKTCIFRYNTNTYNGWE-LITTTESRLS 504 (557)
T ss_pred cceEEEECCCCCeEeecCCCCcccccCcEEEE-C-CEEEEEe---CCCCCCccceeEEEecCCCCCCee-EccccCcccc
Confidence 3578899987763221111111101223322 2 5777776 332 3467899886 3321 1111111111
Q ss_pred eEEeEEeCCCCEEEEEEeCCC--cEEEEEeeCCCc
Q psy14130 313 VLFPYYDHDTRILFLAGKGDG--NIRYYELTNERP 345 (494)
Q Consensus 313 v~~~~~~~~~~~l~~~g~~dg--~i~~wd~~~~~~ 345 (494)
...++. -+..||+.|+.|| .+..||..+.+-
T Consensus 505 ~~~~~~--~~~~iyv~Gg~~~~~~~e~yd~~~~~W 537 (557)
T PHA02713 505 ALHTIL--HDNTIMMLHCYESYMLQDTFNVYTYEW 537 (557)
T ss_pred cceeEE--ECCEEEEEeeecceeehhhcCcccccc
Confidence 111111 2456669999888 678888887763
|
|
| >COG3490 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.64 Score=41.72 Aligned_cols=215 Identities=14% Similarity=0.135 Sum_probs=112.7
Q ss_pred eeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCCCCcc-cceEecccccccEEEEEEcCCCCC
Q psy14130 112 VPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLSGNLN-EWIMDLHGHKRRVGYIEWHPTAEN 190 (494)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~~~~~-~~~~~~~~h~~~V~~~~~~p~~~~ 190 (494)
+.+....+++.+.+..|..++++-. .| . -..++|.........+. ..-+-+.||. .|||+| .
T Consensus 64 ~~lpaR~Hgi~~~p~~~ravafARr--PG-t-------f~~vfD~~~~~~pv~~~s~~~RHfyGHG------vfs~dG-~ 126 (366)
T COG3490 64 TALPARGHGIAFHPALPRAVAFARR--PG-T-------FAMVFDPNGAQEPVTLVSQEGRHFYGHG------VFSPDG-R 126 (366)
T ss_pred eecccccCCeecCCCCcceEEEEec--CC-c-------eEEEECCCCCcCcEEEecccCceeeccc------ccCCCC-c
Confidence 3333444566665555655555432 22 1 25677776663321111 1112334443 589999 5
Q ss_pred EEEEEeCC-----CeEEEEECCCC-eEEEEecCCCCceEEEEEcCCCCEEEEEeC------------------CCeEEEE
Q psy14130 191 VVASAGFD-----YLIILWDVGKG-EALTVIDCHPDVINCLSFNRDGSRLVTTCK------------------DKTVRVL 246 (494)
Q Consensus 191 ~l~s~s~d-----~~v~iwd~~~~-~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~------------------d~~v~iw 246 (494)
+|...-.| |.|-|||.+.+ +.+-.+..|.-....+.|.+||+.++.+.. .-.+.+.
T Consensus 127 ~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsMePSlvll 206 (366)
T COG3490 127 LLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLL 206 (366)
T ss_pred EEEeecCCCCCCCceEEEEecccccceecccccCCcCcceeEEecCCcEEEEeCCceecccccCccccchhhcCccEEEE
Confidence 77666544 78999999754 456677788888889999999999887643 1134445
Q ss_pred eCCCCceEEEeee----cCCCCceEEEEECCCCeEEEEE-ecCCCCceEEEEeCCCCCCceeEeee------cCCCceEE
Q psy14130 247 DPRTGLVISQGVC----HPGTRSSKAVFIGDTGRIVTTG-FSRHSDRQVGLWDENDLNTPLALETV------DSSSGVLF 315 (494)
Q Consensus 247 d~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~g-~~~~~d~~i~iwd~~~~~~~~~~~~~------~~~~~v~~ 315 (494)
|..+|.++.+... +..+ +..+..-++ +.+++.+ |.+..+..--+.-......++..... .-.+.+-+
T Consensus 207 d~atG~liekh~Lp~~l~~lS-iRHld~g~d-gtvwfgcQy~G~~~d~ppLvg~~~~g~~l~~~~~pee~~~~~anYigs 284 (366)
T COG3490 207 DAATGNLIEKHTLPASLRQLS-IRHLDIGRD-GTVWFGCQYRGPRNDLPPLVGHFRKGEPLEFLDLPEEQTAAFANYIGS 284 (366)
T ss_pred eccccchhhhccCchhhhhcc-eeeeeeCCC-CcEEEEEEeeCCCccCCcceeeccCCCcCcccCCCHHHHHHHHhhhhh
Confidence 5555554433221 1111 333333333 3333322 11011100000000011111111111 01234566
Q ss_pred eEEeCCCCEEEEEEeCCCcEEEEEeeCCCc
Q psy14130 316 PYYDHDTRILFLAGKGDGNIRYYELTNERP 345 (494)
Q Consensus 316 ~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~ 345 (494)
++.+.+..++.+|+-..+...+||..+|..
T Consensus 285 iA~n~~~glV~lTSP~GN~~vi~da~tG~v 314 (366)
T COG3490 285 IAANRRDGLVALTSPRGNRAVIWDAATGAV 314 (366)
T ss_pred eeecccCCeEEEecCCCCeEEEEEcCCCcE
Confidence 777777788867776667788999999975
|
|
| >PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2 | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.69 Score=41.62 Aligned_cols=194 Identities=13% Similarity=0.095 Sum_probs=114.2
Q ss_pred EEEEEEcCCCCCEEEEEeCCC--eEEEEECCCCeEEEEecCCC-CceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEE
Q psy14130 179 VGYIEWHPTAENVVASAGFDY--LIILWDVGKGEALTVIDCHP-DVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVIS 255 (494)
Q Consensus 179 V~~~~~~p~~~~~l~s~s~d~--~v~iwd~~~~~~~~~~~~h~-~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~ 255 (494)
...+.|..++ .++-|.+.-| .|+.+|+.+++......-.. ----.++.. +++...-.=.++...+||..+-+.+.
T Consensus 47 TQGL~~~~~g-~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~-~d~l~qLTWk~~~~f~yd~~tl~~~~ 124 (264)
T PF05096_consen 47 TQGLEFLDDG-TLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITIL-GDKLYQLTWKEGTGFVYDPNTLKKIG 124 (264)
T ss_dssp EEEEEEEETT-EEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEE-TTEEEEEESSSSEEEEEETTTTEEEE
T ss_pred CccEEecCCC-EEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEE-CCEEEEEEecCCeEEEEccccceEEE
Confidence 3568886666 6778887766 79999999998766544211 111223333 22333334468899999999999888
Q ss_pred EeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCC---ceEEeEEeCCCCEEEEEEeCC
Q psy14130 256 QGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSS---GVLFPYYDHDTRILFLAGKGD 332 (494)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~g~~d 332 (494)
++.-... -..++ .++..++.+- ....|+++|..+......+...+... .++-+.|- +| .+++---..
T Consensus 125 ~~~y~~E--GWGLt--~dg~~Li~SD----GS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i-~G-~IyANVW~t 194 (264)
T PF05096_consen 125 TFPYPGE--GWGLT--SDGKRLIMSD----GSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI-NG-KIYANVWQT 194 (264)
T ss_dssp EEE-SSS----EEE--ECSSCEEEE-----SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE-TT-EEEEEETTS
T ss_pred EEecCCc--ceEEE--cCCCEEEEEC----CccceEEECCcccceEEEEEEEECCEECCCcEeEEEE-cC-EEEEEeCCC
Confidence 8865543 46666 4445666665 57789999988776544444333332 34456665 44 455766677
Q ss_pred CcEEEEEeeCCCceEEe-ccc-----------ccCCCCeeEEEEecCC-ceeeeccceeEEEEee
Q psy14130 333 GNIRYYELTNERPYIHF-LNQ-----------SLSGAPQRGLGFMPKR-GCDVTQCEIFRFFKLH 384 (494)
Q Consensus 333 g~i~~wd~~~~~~~~~~-~~~-----------~~~~~~v~~~~~~p~~-~~~~~~~~~~~~~~l~ 384 (494)
..|...|..+|+....+ +.. .....-..+||+.|+. .+++++-.--++|.+.
T Consensus 195 d~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTGK~Wp~lyeV~ 259 (264)
T PF05096_consen 195 DRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTGKLWPKLYEVK 259 (264)
T ss_dssp SEEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEETT-SEEEEEE
T ss_pred CeEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEeCCCCceEEEE
Confidence 77888888888753222 111 1113457999999864 5667776655666554
|
3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X. |
| >KOG3617|consensus | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.0099 Score=60.29 Aligned_cols=108 Identities=11% Similarity=0.150 Sum_probs=81.2
Q ss_pred EEEEEcCCCCEEEEEe----CCCeEEEEeCCCCceEEE--eeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCC
Q psy14130 223 NCLSFNRDGSRLVTTC----KDKTVRVLDPRTGLVISQ--GVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEN 296 (494)
Q Consensus 223 ~~l~~~~~~~~l~s~~----~d~~v~iwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~ 296 (494)
+-..|+|...+++.++ ..|.|.||- .+|++-.. .+.| +.+++|+|. ..+++.| -.-|.+.+|...
T Consensus 19 ti~SWHPsePlfAVA~fS~er~GSVtIfa-dtGEPqr~Vt~P~h----atSLCWHpe-~~vLa~g---we~g~~~v~~~~ 89 (1416)
T KOG3617|consen 19 TISSWHPSEPLFAVASFSPERGGSVTIFA-DTGEPQRDVTYPVH----ATSLCWHPE-EFVLAQG---WEMGVSDVQKTN 89 (1416)
T ss_pred cccccCCCCceeEEEEecCCCCceEEEEe-cCCCCCccccccee----hhhhccChH-HHHHhhc---cccceeEEEecC
Confidence 3457999988888776 468888883 45553332 2333 567999998 7889999 478999999876
Q ss_pred CCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeC
Q psy14130 297 DLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTN 342 (494)
Q Consensus 297 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~ 342 (494)
+.+. ......|...+..+.||++|..| +++..-|.+.+|....
T Consensus 90 ~~e~--htv~~th~a~i~~l~wS~~G~~l-~t~d~~g~v~lwr~d~ 132 (1416)
T KOG3617|consen 90 TTET--HTVVETHPAPIQGLDWSHDGTVL-MTLDNPGSVHLWRYDV 132 (1416)
T ss_pred Ccee--eeeccCCCCCceeEEecCCCCeE-EEcCCCceeEEEEeee
Confidence 5332 23334577889999999999999 9999999999998873
|
|
| >PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.37 Score=45.77 Aligned_cols=187 Identities=10% Similarity=0.035 Sum_probs=93.3
Q ss_pred EEcCCCCCEEEEEeCCC--eEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeec
Q psy14130 183 EWHPTAENVVASAGFDY--LIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCH 260 (494)
Q Consensus 183 ~~~p~~~~~l~s~s~d~--~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~ 260 (494)
+|.++|.++|+++..|| .+.+.|+.+++..+.-.+-.....+..++++++.++-....+.|+-.|+++.+....+...
T Consensus 42 ~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~~~vy~~p 121 (386)
T PF14583_consen 42 CFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEERVVYEVP 121 (386)
T ss_dssp -B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--EEEEEE--
T ss_pred CcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECCCeEEEEECCcCcEEEEEECC
Confidence 57888877777776665 6777789888766544433333446778898888877767789999999998865555555
Q ss_pred CCCCceEEEEE-CCCCeEEEEEecC-------------------CCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeC
Q psy14130 261 PGTRSSKAVFI-GDTGRIVTTGFSR-------------------HSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDH 320 (494)
Q Consensus 261 ~~~~~~~~~~~-~~~~~l~~~g~~~-------------------~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~ 320 (494)
... .-...|. +.+...++..-.. .-...|.--|+.+++.... +....-+..+.|+|
T Consensus 122 ~~~-~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~~~v---~~~~~wlgH~~fsP 197 (386)
T PF14583_consen 122 DDW-KGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGERKVV---FEDTDWLGHVQFSP 197 (386)
T ss_dssp TTE-EEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT--EEEE---EEESS-EEEEEEET
T ss_pred ccc-ccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCceeEE---EecCccccCcccCC
Confidence 554 3334553 3334444332100 1123444556665443222 22334566789999
Q ss_pred CCCEEEEEEe---CCCc-EEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeee
Q psy14130 321 DTRILFLAGK---GDGN-IRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVT 373 (494)
Q Consensus 321 ~~~~l~~~g~---~dg~-i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~ 373 (494)
....+++-|- .|.. -|+|-+++...-...+........+.-=-|.|||..+.-
T Consensus 198 ~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~~e~~gHEfw~~DG~~i~y 254 (386)
T PF14583_consen 198 TDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRMEGESVGHEFWVPDGSTIWY 254 (386)
T ss_dssp TEEEEEEEEE-S-TTTSS-SEEEEETTS---EESS---TTEEEEEEEE-TTSS-EEE
T ss_pred CCCCEEEEeccCCcceeceEEEEEEcCCCcceeeecCCCCcccccccccCCCCEEEE
Confidence 8877744432 2332 377877754333344444333334444458899876544
|
|
| >PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.76 Score=41.83 Aligned_cols=146 Identities=10% Similarity=0.062 Sum_probs=86.5
Q ss_pred ceEEEEEcCCCCEEEEEe---CCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEe-CC
Q psy14130 221 VINCLSFNRDGSRLVTTC---KDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWD-EN 296 (494)
Q Consensus 221 ~v~~l~~~~~~~~l~s~~---~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd-~~ 296 (494)
.+.+.+++++++.++... ....+.++... ....... .+.....-.|.++ +.+.+.. ..+...+++. ..
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~--~~~~~~~--~g~~l~~PS~d~~-g~~W~v~---~~~~~~~~~~~~~ 96 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAG--GPVRPVL--TGGSLTRPSWDPD-GWVWTVD---DGSGGVRVVRDSA 96 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcCC--Ccceeec--cCCccccccccCC-CCEEEEE---cCCCceEEEEecC
Confidence 688999999999887766 33455555543 3222221 2223677789998 7777776 4566666663 22
Q ss_pred CCCC-ceeEeeecCCCceEEeEEeCCCCEEEEEE--eCCCcEEEEEeeCCCce--EEecccc----cCCCCeeEEEEecC
Q psy14130 297 DLNT-PLALETVDSSSGVLFPYYDHDTRILFLAG--KGDGNIRYYELTNERPY--IHFLNQS----LSGAPQRGLGFMPK 367 (494)
Q Consensus 297 ~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~g--~~dg~i~~wd~~~~~~~--~~~~~~~----~~~~~v~~~~~~p~ 367 (494)
+... +...........|..+.+||||..+++.. ..++.|.+=-+.....- ..+.... .....+.+++|.++
T Consensus 97 ~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~ 176 (253)
T PF10647_consen 97 SGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDD 176 (253)
T ss_pred CCcceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCC
Confidence 2222 22222111112799999999999985554 34577777665422110 1111111 12457899999999
Q ss_pred Cceeeec
Q psy14130 368 RGCDVTQ 374 (494)
Q Consensus 368 ~~~~~~~ 374 (494)
..+++..
T Consensus 177 ~~L~V~~ 183 (253)
T PF10647_consen 177 STLVVLG 183 (253)
T ss_pred CEEEEEe
Confidence 9887775
|
It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues. |
| >PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A | Back alignment and domain information |
|---|
Probab=96.19 E-value=1.1 Score=41.75 Aligned_cols=172 Identities=16% Similarity=0.193 Sum_probs=85.5
Q ss_pred EEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCC
Q psy14130 152 KLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDG 231 (494)
Q Consensus 152 ~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~ 231 (494)
.||...+++. .......+-...+..+.-+++| .+++.++.-....-||.-...-...-..-...|.++.|.|++
T Consensus 125 ~iy~T~DgG~-----tW~~~~~~~~gs~~~~~r~~dG-~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~ 198 (302)
T PF14870_consen 125 AIYRTTDGGK-----TWQAVVSETSGSINDITRSSDG-RYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDG 198 (302)
T ss_dssp -EEEESSTTS-----SEEEEE-S----EEEEEE-TTS--EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS
T ss_pred cEEEeCCCCC-----CeeEcccCCcceeEeEEECCCC-cEEEEECcccEEEEecCCCccceEEccCccceehhceecCCC
Confidence 5666666543 3333344455778899999998 688887766666788864322222222346889999999998
Q ss_pred CEEEEEeCCCeEEEEe-CCCCceEEE--eee-cCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee
Q psy14130 232 SRLVTTCKDKTVRVLD-PRTGLVISQ--GVC-HPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV 307 (494)
Q Consensus 232 ~~l~s~~~d~~v~iwd-~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~ 307 (494)
.+.+.+ ..|.|++=+ ....+.... ... ..+..+..++|.++ +.+.++| ..|.+.. ....++.=......
T Consensus 199 ~lw~~~-~Gg~~~~s~~~~~~~~w~~~~~~~~~~~~~~ld~a~~~~-~~~wa~g----g~G~l~~-S~DgGktW~~~~~~ 271 (302)
T PF14870_consen 199 NLWMLA-RGGQIQFSDDPDDGETWSEPIIPIKTNGYGILDLAYRPP-NEIWAVG----GSGTLLV-STDGGKTWQKDRVG 271 (302)
T ss_dssp -EEEEE-TTTEEEEEE-TTEEEEE---B-TTSS--S-EEEEEESSS-S-EEEEE----STT-EEE-ESSTTSS-EE-GGG
T ss_pred CEEEEe-CCcEEEEccCCCCccccccccCCcccCceeeEEEEecCC-CCEEEEe----CCccEEE-eCCCCccceECccc
Confidence 776644 888898887 222222222 111 12222677888877 7788887 4554433 33333322111111
Q ss_pred -cCCCceEEeEEeCCCCEEEEEEeCCCcEEEE
Q psy14130 308 -DSSSGVLFPYYDHDTRILFLAGKGDGNIRYY 338 (494)
Q Consensus 308 -~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~w 338 (494)
........+.|..+.+-+ +.| .+|.|.-|
T Consensus 272 ~~~~~n~~~i~f~~~~~gf-~lG-~~G~ll~~ 301 (302)
T PF14870_consen 272 ENVPSNLYRIVFVNPDKGF-VLG-QDGVLLRY 301 (302)
T ss_dssp TTSSS---EEEEEETTEEE-EE--STTEEEEE
T ss_pred cCCCCceEEEEEcCCCceE-EEC-CCcEEEEe
Confidence 123456677776554444 555 78877554
|
|
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.17 E-value=1.1 Score=41.80 Aligned_cols=195 Identities=11% Similarity=0.003 Sum_probs=110.9
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEec----C-CCCceEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVID----C-HPDVINC 224 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~----~-h~~~v~~ 224 (494)
.|.-|+..++.. ..+. +.+.+.++..-..+ ..|+++. ..+.+++++++..+..+. + -....+.
T Consensus 48 ~i~r~~~~~g~~--------~~~~-~p~~~~~~~~~d~~-g~Lv~~~--~g~~~~~~~~~~~~t~~~~~~~~~~~~r~ND 115 (307)
T COG3386 48 RIHRLDPETGKK--------RVFP-SPGGFSSGALIDAG-GRLIACE--HGVRLLDPDTGGKITLLAEPEDGLPLNRPND 115 (307)
T ss_pred eEEEecCCcCce--------EEEE-CCCCcccceeecCC-CeEEEEc--cccEEEeccCCceeEEeccccCCCCcCCCCc
Confidence 466677654421 1222 22333444433333 3566654 346777876665533332 1 1245667
Q ss_pred EEEcCCCCEEEEEeC-----------CCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEE
Q psy14130 225 LSFNRDGSRLVTTCK-----------DKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLW 293 (494)
Q Consensus 225 l~~~~~~~~l~s~~~-----------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iw 293 (494)
+...|+|++.++... -|.|.-+|. .+..+..+..+-.. .+.++|+|++..++.+- +..+.|.-|
T Consensus 116 ~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p-~g~~~~l~~~~~~~-~NGla~SpDg~tly~aD---T~~~~i~r~ 190 (307)
T COG3386 116 GVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDP-DGGVVRLLDDDLTI-PNGLAFSPDGKTLYVAD---TPANRIHRY 190 (307)
T ss_pred eeEcCCCCEEEeCCCccccCccccCCcceEEEEcC-CCCEEEeecCcEEe-cCceEECCCCCEEEEEe---CCCCeEEEE
Confidence 889999987776544 134555555 45555555554433 68899999988888887 677889888
Q ss_pred eCCC--CC--CceeEeeec-CCCceEEeEEeCCCCEEEEEEeCC-CcEEEEEeeCCCceEEecccccCCCCeeEEEEec
Q psy14130 294 DEND--LN--TPLALETVD-SSSGVLFPYYDHDTRILFLAGKGD-GNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMP 366 (494)
Q Consensus 294 d~~~--~~--~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~g~~d-g~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p 366 (494)
++.. .. ........+ .....-.++.+.+|.+. +++-.+ +.|..|+.. ++.+....-. ...+.+++|--
T Consensus 191 ~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw-~~a~~~g~~v~~~~pd-G~l~~~i~lP---~~~~t~~~FgG 264 (307)
T COG3386 191 DLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLW-VAAVWGGGRVVRFNPD-GKLLGEIKLP---VKRPTNPAFGG 264 (307)
T ss_pred ecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEE-EecccCCceEEEECCC-CcEEEEEECC---CCCCccceEeC
Confidence 8752 11 111111111 22344457778888777 344344 389999988 6654333221 14577888864
|
|
| >PHA02713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.59 Score=47.98 Aligned_cols=61 Identities=5% Similarity=0.063 Sum_probs=35.3
Q ss_pred CEEEEEeCC------CeEEEEECCCCeEEE--EecCCCCceEEEEEcCCCCEEEEEeCCC-----eEEEEeCCCCc
Q psy14130 190 NVVASAGFD------YLIILWDVGKGEALT--VIDCHPDVINCLSFNRDGSRLVTTCKDK-----TVRVLDPRTGL 252 (494)
Q Consensus 190 ~~l~s~s~d------~~v~iwd~~~~~~~~--~~~~h~~~v~~l~~~~~~~~l~s~~~d~-----~v~iwd~~~~~ 252 (494)
.+++.|+.+ ..+..||+.+..-.. .+.........+.. +|+..+.|+.++ .+..||+.+.+
T Consensus 305 ~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~~~~m~~~R~~~~~~~~--~g~IYviGG~~~~~~~~sve~Ydp~~~~ 378 (557)
T PHA02713 305 EIIIAGGYNFNNPSLNKVYKINIENKIHVELPPMIKNRCRFSLAVI--DDTIYAIGGQNGTNVERTIECYTMGDDK 378 (557)
T ss_pred EEEEEcCCCCCCCccceEEEEECCCCeEeeCCCCcchhhceeEEEE--CCEEEEECCcCCCCCCceEEEEECCCCe
Confidence 577778754 347788887764321 11111111122222 577778887653 48899998775
|
|
| >PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.014 Score=36.99 Aligned_cols=34 Identities=26% Similarity=0.430 Sum_probs=29.1
Q ss_pred CCccccceeeEEECCCCCeeEEeecCCCcEEEEeee
Q psy14130 2 DKLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGV 37 (494)
Q Consensus 2 ~~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~ 37 (494)
||.-.+.|.+++|+| ..++||.|..||.|. ++..
T Consensus 7 ~k~l~~~v~~~~w~P-~mdLiA~~t~~g~v~-v~Rl 40 (47)
T PF12894_consen 7 EKNLPSRVSCMSWCP-TMDLIALGTEDGEVL-VYRL 40 (47)
T ss_pred ccCCCCcEEEEEECC-CCCEEEEEECCCeEE-EEEC
Confidence 355667899999999 899999999999997 7654
|
|
| >PRK13616 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.45 Score=48.87 Aligned_cols=175 Identities=10% Similarity=-0.005 Sum_probs=94.3
Q ss_pred CCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEe------CCC--eEEEEeCCCCceEEEeeecCCCCceEEE
Q psy14130 198 DYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTC------KDK--TVRVLDPRTGLVISQGVCHPGTRSSKAV 269 (494)
Q Consensus 198 d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~------~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 269 (494)
+|.+.-.+-....++.-..+....+.+.+.+|+|+.++... .|. .|.+++.. +.. ..+.. ... ...-.
T Consensus 328 ~G~l~~~~~~~~~pv~g~~g~~~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~g-g~~-~~lt~-g~~-~t~Ps 403 (591)
T PRK13616 328 DGSLVSVDGQGVTPVPGAFGQMGNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLG-GVA-VQVLE-GHS-LTRPS 403 (591)
T ss_pred CCeEEEecCCCeeeCCCccccccCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCC-Ccc-eeeec-CCC-CCCce
Confidence 66665443222223222223334678999999999887765 243 55555652 322 22221 112 57778
Q ss_pred EECCCCeEEEEEe--------cCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEE---E
Q psy14130 270 FIGDTGRIVTTGF--------SRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRY---Y 338 (494)
Q Consensus 270 ~~~~~~~l~~~g~--------~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~---w 338 (494)
|+|+++.+.++.- .....+++.+.++....... .....|..+.|||||..+++.. +|.|++ -
T Consensus 404 WspDG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~-----~~~g~Issl~wSpDG~RiA~i~--~g~v~Va~Vv 476 (591)
T PRK13616 404 WSLDADAVWVVVDGNTVVRVIRDPATGQLARTPVDASAVAS-----RVPGPISELQLSRDGVRAAMII--GGKVYLAVVE 476 (591)
T ss_pred ECCCCCceEEEecCcceEEEeccCCCceEEEEeccCchhhh-----ccCCCcCeEEECCCCCEEEEEE--CCEEEEEEEE
Confidence 9998666665540 00112333333443321111 2235699999999999985554 467776 3
Q ss_pred EeeCCCceEEecc----cccCCCCeeEEEEecCCceeeec-cceeEEEEeeC
Q psy14130 339 ELTNERPYIHFLN----QSLSGAPQRGLGFMPKRGCDVTQ-CEIFRFFKLHT 385 (494)
Q Consensus 339 d~~~~~~~~~~~~----~~~~~~~v~~~~~~p~~~~~~~~-~~~~~~~~l~~ 385 (494)
....|. .++.. .......+.++.|.+++.+++.. +....+|.+.-
T Consensus 477 r~~~G~--~~l~~~~~l~~~l~~~~~~l~W~~~~~L~V~~~~~~~~v~~v~v 526 (591)
T PRK13616 477 QTEDGQ--YALTNPREVGPGLGDTAVSLDWRTGDSLVVGRSDPEHPVWYVNL 526 (591)
T ss_pred eCCCCc--eeecccEEeecccCCccccceEecCCEEEEEecCCCCceEEEec
Confidence 333443 12211 01123346889999999876553 34445666655
|
|
| >cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases | Back alignment and domain information |
|---|
Probab=96.04 E-value=1.8 Score=43.69 Aligned_cols=156 Identities=13% Similarity=0.086 Sum_probs=88.0
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEEecCCCCc--eEEEEEcC--CCCEEEEEe---------CCCeEEEEeCCCCceEEE
Q psy14130 190 NVVASAGFDYLIILWDVGKGEALTVIDCHPDV--INCLSFNR--DGSRLVTTC---------KDKTVRVLDPRTGLVISQ 256 (494)
Q Consensus 190 ~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~--v~~l~~~~--~~~~l~s~~---------~d~~v~iwd~~~~~~~~~ 256 (494)
..++.++.++.|.-+|.++|+.+..+...... -..+.-+| .+..++.++ .++.+..+|..+|+.+-.
T Consensus 111 ~~V~v~~~~g~v~AlD~~TG~~~W~~~~~~~~~~~~~i~ssP~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~ 190 (488)
T cd00216 111 RKVFFGTFDGRLVALDAETGKQVWKFGNNDQVPPGYTMTGAPTIVKKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWR 190 (488)
T ss_pred CeEEEecCCCeEEEEECCCCCEeeeecCCCCcCcceEecCCCEEECCEEEEeccccccccCCCCcEEEEEECCCCceeeE
Confidence 36777888999999999999988877643221 01111112 123455543 368899999999998776
Q ss_pred eeecCCC-------------------Cc-eEEEEECCCCeEEEEEecCCCCc------------------eEEEEeCCCC
Q psy14130 257 GVCHPGT-------------------RS-SKAVFIGDTGRIVTTGFSRHSDR------------------QVGLWDENDL 298 (494)
Q Consensus 257 ~~~~~~~-------------------~~-~~~~~~~~~~~l~~~g~~~~~d~------------------~i~iwd~~~~ 298 (494)
+...... .+ ...+..+.++.+ ..+ ..++ .|.-+|+.++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~g~V-~vg---~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG 266 (488)
T cd00216 191 FYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKTNLV-YVG---TGNGSPWNWGGRRTPGDNLYTDSIVALDADTG 266 (488)
T ss_pred eeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCCCEE-EEE---CCCCCCCccCCccCCCCCCceeeEEEEcCCCC
Confidence 6542110 00 112333333334 444 2333 6888888877
Q ss_pred CCceeEeeecCC----CceEEeEEe----CCCC--EEEEEEeCCCcEEEEEeeCCCceEEe
Q psy14130 299 NTPLALETVDSS----SGVLFPYYD----HDTR--ILFLAGKGDGNIRYYELTNERPYIHF 349 (494)
Q Consensus 299 ~~~~~~~~~~~~----~~v~~~~~~----~~~~--~l~~~g~~dg~i~~wd~~~~~~~~~~ 349 (494)
+..-......+. .....+.+. -++. .+++.++.+|.+...|.++|+.+...
T Consensus 267 ~~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~ 327 (488)
T cd00216 267 KVKWFYQTTPHDLWDYDGPNQPSLADIKPKDGKPVPAIVHAPKNGFFYVLDRTTGKLISAR 327 (488)
T ss_pred CEEEEeeCCCCCCcccccCCCCeEEeccccCCCeeEEEEEECCCceEEEEECCCCcEeeEe
Confidence 654433221110 010111111 2333 23467888999999999999876543
|
The alignment model contains an 8-bladed beta-propeller. |
| >PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.031 Score=35.46 Aligned_cols=33 Identities=18% Similarity=0.243 Sum_probs=29.5
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc
Q psy14130 219 PDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGL 252 (494)
Q Consensus 219 ~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~ 252 (494)
...|..++|+|...+||.++.+|.|.++.+ +++
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~q 43 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQ 43 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCc
Confidence 457999999999999999999999999998 454
|
|
| >KOG4649|consensus | Back alignment and domain information |
|---|
Probab=95.94 E-value=1.1 Score=39.68 Aligned_cols=91 Identities=18% Similarity=0.159 Sum_probs=68.1
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEE
Q psy14130 190 NVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAV 269 (494)
Q Consensus 190 ~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 269 (494)
.+++.|...|.+++.+..+|+....+..-+.-=......+++.++..|+.|++....|+++..++.+.+...+. ..+-+
T Consensus 64 dfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~a~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~~-f~sP~ 142 (354)
T KOG4649|consen 64 DFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGGT-FVSPV 142 (354)
T ss_pred CEEEEEEccCcEEEEEecchhheeeeeehhhhccceEEcCCCceEEEecCCCcEEEecccccceEEecccCCce-eccce
Confidence 58999999999999999999877777643332234556778999999999999999999999988887655443 33344
Q ss_pred EECCCCeEEEEE
Q psy14130 270 FIGDTGRIVTTG 281 (494)
Q Consensus 270 ~~~~~~~l~~~g 281 (494)
..+-.+.++++.
T Consensus 143 i~~g~~sly~a~ 154 (354)
T KOG4649|consen 143 IAPGDGSLYAAI 154 (354)
T ss_pred ecCCCceEEEEe
Confidence 445345566555
|
|
| >KOG2444|consensus | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.01 Score=50.97 Aligned_cols=104 Identities=16% Similarity=0.051 Sum_probs=56.6
Q ss_pred EEEEEeCCCeEEEEeCCCCceE-EEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCC
Q psy14130 233 RLVTTCKDKTVRVLDPRTGLVI-SQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSS 311 (494)
Q Consensus 233 ~l~s~~~d~~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 311 (494)
.+...+.|+.|+-++++.-+.. +.-..+... .-.+..+.-+.+| +.+|.|.+|...-.......... ...
T Consensus 32 ~l~~~sa~~~v~~~~~~k~k~s~rse~~~~e~-----~~v~~~~~~~~vG---~~dg~v~~~n~n~~g~~~d~~~s-~~e 102 (238)
T KOG2444|consen 32 LLRATSADGLVRERKVRKHKESCRSERFIDEG-----QRVVTASAKLMVG---TSDGAVYVFNWNLEGAHSDRVCS-GEE 102 (238)
T ss_pred hhccccCCcccccchhhhhhhhhhhhhhhhcc-----eeecccCceEEee---cccceEEEecCCccchHHHhhhc-ccc
Confidence 4556678899998888765421 111112111 1112224456666 68999999987632221111111 112
Q ss_pred ceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCc
Q psy14130 312 GVLFPYYDHDTRILFLAGKGDGNIRYYELTNERP 345 (494)
Q Consensus 312 ~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~ 345 (494)
.+.++.-.-+...+..+++.||.|+.|++...+.
T Consensus 103 ~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~ 136 (238)
T KOG2444|consen 103 SIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKV 136 (238)
T ss_pred cceeccccccccceeEEeccCCceeeeccccCce
Confidence 2222222222222558899999999999988775
|
|
| >TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain | Back alignment and domain information |
|---|
Probab=95.88 E-value=1.9 Score=41.82 Aligned_cols=100 Identities=14% Similarity=0.074 Sum_probs=56.5
Q ss_pred cccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC-----e--EE-EEecC----CCCceEEEEEcCCCCEEEEEeC----
Q psy14130 176 KRRVGYIEWHPTAENVVASAGFDYLIILWDVGKG-----E--AL-TVIDC----HPDVINCLSFNRDGSRLVTTCK---- 239 (494)
Q Consensus 176 ~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~-----~--~~-~~~~~----h~~~v~~l~~~~~~~~l~s~~~---- 239 (494)
-.....+++.+++ ++++ +.....++.|.... + .+ ..+.. +......++|.|||.+.++.+.
T Consensus 71 l~~p~Gi~~~~~G--lyV~-~~~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~ 147 (367)
T TIGR02604 71 LSMVTGLAVAVGG--VYVA-TPPDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLAS 147 (367)
T ss_pred CCCccceeEecCC--EEEe-CCCeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCc
Confidence 3446789998886 5554 44443344454321 2 11 12322 2345778999999987775552
Q ss_pred ---------------CCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEE
Q psy14130 240 ---------------DKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTG 281 (494)
Q Consensus 240 ---------------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 281 (494)
.+.|.-+|+..++......++. ....++|.++ +.++++-
T Consensus 148 ~~~~~~~~~~~~~~~~g~i~r~~pdg~~~e~~a~G~r--np~Gl~~d~~-G~l~~td 201 (367)
T TIGR02604 148 KVTRPGTSDESRQGLGGGLFRYNPDGGKLRVVAHGFQ--NPYGHSVDSW-GDVFFCD 201 (367)
T ss_pred eeccCCCccCcccccCceEEEEecCCCeEEEEecCcC--CCccceECCC-CCEEEEc
Confidence 1456666776555322222332 2578899887 5666654
|
All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs. |
| >KOG4441|consensus | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.68 Score=47.52 Aligned_cols=182 Identities=13% Similarity=0.080 Sum_probs=95.3
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCC------CeEEEEECCCCeEEE--EecCCCC
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFD------YLIILWDVGKGEALT--VIDCHPD 220 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d------~~v~iwd~~~~~~~~--~~~~h~~ 220 (494)
..+..+|..++.- .....+. +...-.+++...+ .+.++|+.| .++..||..+.+-.. .+.....
T Consensus 301 ~~ve~yd~~~~~w-----~~~a~m~-~~r~~~~~~~~~~--~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~~a~M~~~R~ 372 (571)
T KOG4441|consen 301 RSVECYDPKTNEW-----SSLAPMP-SPRCRVGVAVLNG--KLYVVGGYDSGSDRLSSVERYDPRTNQWTPVAPMNTKRS 372 (571)
T ss_pred ceeEEecCCcCcE-----eecCCCC-cccccccEEEECC--EEEEEccccCCCcccceEEEecCCCCceeccCCccCccc
Confidence 4588888877621 1222222 3333445555554 588999988 367788888776322 1221111
Q ss_pred ceEEEEEcCCCCEEEEEeCCC-----eEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCC---ceEEE
Q psy14130 221 VINCLSFNRDGSRLVTTCKDK-----TVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSD---RQVGL 292 (494)
Q Consensus 221 ~v~~l~~~~~~~~l~s~~~d~-----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d---~~i~i 292 (494)
....... +|.+.+.|+.|| ++-.||+++.+-...-.... . ........-+++++++|-..... ..+..
T Consensus 373 ~~~v~~l--~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~-~-r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~ 448 (571)
T KOG4441|consen 373 DFGVAVL--DGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLT-R-RSGHGVAVLGGKLYIIGGGDGSSNCLNSVEC 448 (571)
T ss_pred cceeEEE--CCEEEEEeccccccccccEEEecCCCCcccccCCCCc-c-eeeeEEEEECCEEEEEcCcCCCccccceEEE
Confidence 1111222 688888999886 47789988776222111111 1 12222222246787777211112 56788
Q ss_pred EeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCc-----EEEEEeeCCCc
Q psy14130 293 WDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGN-----IRYYELTNERP 345 (494)
Q Consensus 293 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~-----i~~wd~~~~~~ 345 (494)
||..+......-. ......-..++ --+..||+.|+.|+. |..||..+.+.
T Consensus 449 YDP~t~~W~~~~~-M~~~R~~~g~a--~~~~~iYvvGG~~~~~~~~~VE~ydp~~~~W 503 (571)
T KOG4441|consen 449 YDPETNTWTLIAP-MNTRRSGFGVA--VLNGKIYVVGGFDGTSALSSVERYDPETNQW 503 (571)
T ss_pred EcCCCCceeecCC-cccccccceEE--EECCEEEEECCccCCCccceEEEEcCCCCce
Confidence 9887644311111 10111111111 134566688888773 77788887763
|
|
| >KOG4441|consensus | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.64 Score=47.73 Aligned_cols=184 Identities=16% Similarity=0.133 Sum_probs=99.0
Q ss_pred CEEEEEeCC------CeEEEEECCCCeEEEE--ecCCCCceEEEEEcCCCCEEEEEeCC------CeEEEEeCCCCceEE
Q psy14130 190 NVVASAGFD------YLIILWDVGKGEALTV--IDCHPDVINCLSFNRDGSRLVTTCKD------KTVRVLDPRTGLVIS 255 (494)
Q Consensus 190 ~~l~s~s~d------~~v~iwd~~~~~~~~~--~~~h~~~v~~l~~~~~~~~l~s~~~d------~~v~iwd~~~~~~~~ 255 (494)
.+++.|+.+ ..+..+|..+++-... +. ....-.+++.. ++...++|+.| ..+..||+++.+-..
T Consensus 286 ~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~-~~r~~~~~~~~-~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~ 363 (571)
T KOG4441|consen 286 KLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMP-SPRCRVGVAVL-NGKLYVVGGYDSGSDRLSSVERYDPRTNQWTP 363 (571)
T ss_pred eEEEECCCCCCCcccceeEEecCCcCcEeecCCCC-cccccccEEEE-CCEEEEEccccCCCcccceEEEecCCCCceec
Confidence 577888777 3688899887743322 22 22233444444 45788888888 468889999887333
Q ss_pred EeeecCCCCceEEEEECCCCeEEEEEecCCCCc-----eEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEe
Q psy14130 256 QGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDR-----QVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGK 330 (494)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~-----~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~ 330 (494)
.-.-.... .......-++.++++| +.|| +|..||.++......-. ............-+..||++|+
T Consensus 364 ~a~M~~~R--~~~~v~~l~g~iYavG---G~dg~~~l~svE~YDp~~~~W~~va~---m~~~r~~~gv~~~~g~iYi~GG 435 (571)
T KOG4441|consen 364 VAPMNTKR--SDFGVAVLDGKLYAVG---GFDGEKSLNSVECYDPVTNKWTPVAP---MLTRRSGHGVAVLGGKLYIIGG 435 (571)
T ss_pred cCCccCcc--ccceeEEECCEEEEEe---ccccccccccEEEecCCCCcccccCC---CCcceeeeEEEEECCEEEEEcC
Confidence 11111111 1122222246788888 5664 47778877543311110 1112223333334556668888
Q ss_pred CCC------cEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec-cc-----eeEEEEeeC
Q psy14130 331 GDG------NIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ-CE-----IFRFFKLHT 385 (494)
Q Consensus 331 ~dg------~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~-~~-----~~~~~~l~~ 385 (494)
.|+ ++..||..+++ .+.+..+.....-.+++...+..+.+.+ ++ .+..|+..+
T Consensus 436 ~~~~~~~l~sve~YDP~t~~--W~~~~~M~~~R~~~g~a~~~~~iYvvGG~~~~~~~~~VE~ydp~~ 500 (571)
T KOG4441|consen 436 GDGSSNCLNSVECYDPETNT--WTLIAPMNTRRSGFGVAVLNGKIYVVGGFDGTSALSSVERYDPET 500 (571)
T ss_pred cCCCccccceEEEEcCCCCc--eeecCCcccccccceEEEECCEEEEECCccCCCccceEEEEcCCC
Confidence 654 46788888776 3444444333334455555554444444 22 245555555
|
|
| >KOG4499|consensus | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.24 Score=43.01 Aligned_cols=99 Identities=17% Similarity=0.284 Sum_probs=72.1
Q ss_pred EEEEEEcCCCCCEEEEEeCCCeEEEEE--CCCCe-----EEEEecC---CCC-ceEEEEEcCCCCEEEEEeCCCeEEEEe
Q psy14130 179 VGYIEWHPTAENVVASAGFDYLIILWD--VGKGE-----ALTVIDC---HPD-VINCLSFNRDGSRLVTTCKDKTVRVLD 247 (494)
Q Consensus 179 V~~~~~~p~~~~~l~s~s~d~~v~iwd--~~~~~-----~~~~~~~---h~~-~v~~l~~~~~~~~l~s~~~d~~v~iwd 247 (494)
-+.++|+.+...+.++-+.+.+|.-|| ..+|. .+..++. .+. ..-.++...+|.+.+++-..++|...|
T Consensus 160 sNgl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~d 239 (310)
T KOG4499|consen 160 SNGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVD 239 (310)
T ss_pred CccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEEC
Confidence 357899988777788888899998888 55553 2323321 111 123456677888888888999999999
Q ss_pred CCCCceEEEeeecCCCCceEEEEECCCCeEE
Q psy14130 248 PRTGLVISQGVCHPGTRSSKAVFIGDTGRIV 278 (494)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 278 (494)
+.+|+.+.++...... +++++|-..+-.++
T Consensus 240 p~tGK~L~eiklPt~q-itsccFgGkn~d~~ 269 (310)
T KOG4499|consen 240 PTTGKILLEIKLPTPQ-ITSCCFGGKNLDIL 269 (310)
T ss_pred CCCCcEEEEEEcCCCc-eEEEEecCCCccEE
Confidence 9999999999887665 89999976633333
|
|
| >COG3490 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.29 Score=43.80 Aligned_cols=110 Identities=15% Similarity=0.142 Sum_probs=71.8
Q ss_pred eEEEEECCCCeEEEEEecCCCCc-eEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEe----CCCcEEEEEe
Q psy14130 266 SKAVFIGDTGRIVTTGFSRHSDR-QVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGK----GDGNIRYYEL 340 (494)
Q Consensus 266 ~~~~~~~~~~~l~~~g~~~~~d~-~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~----~dg~i~~wd~ 340 (494)
..++++|...+-++.. ..-| ...++|......+..........-.-.-.|||||.+||+|-. .-|.|-+||.
T Consensus 71 Hgi~~~p~~~ravafA---RrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~ 147 (366)
T COG3490 71 HGIAFHPALPRAVAFA---RRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDA 147 (366)
T ss_pred CCeecCCCCcceEEEE---ecCCceEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEec
Confidence 4567777766666555 3334 457889887777666543322222223469999999988842 3477999999
Q ss_pred eCCCceEEecccc-cCCCCeeEEEEecCCceeeeccceeEEE
Q psy14130 341 TNERPYIHFLNQS-LSGAPQRGLGFMPKRGCDVTQCEIFRFF 381 (494)
Q Consensus 341 ~~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~~~~~~~~~~~~ 381 (494)
+.+- .+ +.++ .++-....+.|.+||..++..++-|+.-
T Consensus 148 r~~f--qr-vgE~~t~GiGpHev~lm~DGrtlvvanGGIeth 186 (366)
T COG3490 148 REGF--QR-VGEFSTHGIGPHEVTLMADGRTLVVANGGIETH 186 (366)
T ss_pred cccc--ce-ecccccCCcCcceeEEecCCcEEEEeCCceecc
Confidence 8553 22 2222 2344567899999999999887766654
|
|
| >cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.82 Score=46.20 Aligned_cols=156 Identities=13% Similarity=0.124 Sum_probs=90.9
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEEecCCCC------ceE--EEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecC
Q psy14130 190 NVVASAGFDYLIILWDVGKGEALTVIDCHPD------VIN--CLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHP 261 (494)
Q Consensus 190 ~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~------~v~--~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~ 261 (494)
..++.++.++.|.-.|..+|+.+..+..... .+. .+... ++..++.++.++.|.-+|.++|+.+-+.....
T Consensus 62 g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~-~~~~V~v~~~~g~v~AlD~~TG~~~W~~~~~~ 140 (488)
T cd00216 62 GDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYW-DPRKVFFGTFDGRLVALDAETGKQVWKFGNND 140 (488)
T ss_pred CEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEc-cCCeEEEecCCCeEEEEECCCCCEeeeecCCC
Confidence 3567777789999999999988777653322 010 11111 22678888899999999999999887765432
Q ss_pred CC-----CceEEEEECCCCeEEEEEecC-----CCCceEEEEeCCCCCCceeEeeecC------------------CCce
Q psy14130 262 GT-----RSSKAVFIGDTGRIVTTGFSR-----HSDRQVGLWDENDLNTPLALETVDS------------------SSGV 313 (494)
Q Consensus 262 ~~-----~~~~~~~~~~~~~l~~~g~~~-----~~d~~i~iwd~~~~~~~~~~~~~~~------------------~~~v 313 (494)
.. ......... +.+++..... ..++.+.-+|..+++..-....... ...+
T Consensus 141 ~~~~~~~i~ssP~v~~--~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~v 218 (488)
T cd00216 141 QVPPGYTMTGAPTIVK--KLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGTS 218 (488)
T ss_pred CcCcceEecCCCEEEC--CEEEEeccccccccCCCCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCCCCc
Confidence 20 011112221 3333322000 1357788888887665433322110 0111
Q ss_pred -EEeEEeCCCCEEEEEEeCCC------------------cEEEEEeeCCCceEEe
Q psy14130 314 -LFPYYDHDTRILFLAGKGDG------------------NIRYYELTNERPYIHF 349 (494)
Q Consensus 314 -~~~~~~~~~~~l~~~g~~dg------------------~i~~wd~~~~~~~~~~ 349 (494)
..+++++.+..+ +.++.++ .|.-+|..+++...++
T Consensus 219 w~~pa~d~~~g~V-~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~ 272 (488)
T cd00216 219 WASPTYDPKTNLV-YVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFY 272 (488)
T ss_pred cCCeeEeCCCCEE-EEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEe
Confidence 235666666677 4454454 7999999999876554
|
The alignment model contains an 8-bladed beta-propeller. |
| >PF15390 DUF4613: Domain of unknown function (DUF4613) | Back alignment and domain information |
|---|
Probab=95.47 E-value=1.2 Score=44.25 Aligned_cols=183 Identities=12% Similarity=0.063 Sum_probs=102.5
Q ss_pred cccEEEEEEcCCCCCEEEEEe--CCCeEEEEECCCCeEEEEecCCCCceEEEEEcCC----CCEEEEEeCCCeEEEEeCC
Q psy14130 176 KRRVGYIEWHPTAENVVASAG--FDYLIILWDVGKGEALTVIDCHPDVINCLSFNRD----GSRLVTTCKDKTVRVLDPR 249 (494)
Q Consensus 176 ~~~V~~~~~~p~~~~~l~s~s--~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~----~~~l~s~~~d~~v~iwd~~ 249 (494)
-.+|..++|.. |.+++.|.- ..|.+++=| ...+. .-+.|.++.|.|- -..|+..-..+.|.+|.+.
T Consensus 19 iHPvhGlaWTD-GkqVvLT~L~l~~gE~kfGd---s~viG----qFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~ 90 (671)
T PF15390_consen 19 IHPVHGLAWTD-GKQVVLTDLQLHNGEPKFGD---SKVIG----QFEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLC 90 (671)
T ss_pred hccccceEecC-CCEEEEEeeeeeCCccccCC---ccEee----ccceeeeeeecCcccCCCCceEEEeccceEEEEEec
Confidence 35677888874 435555543 233343322 12233 3346889999994 3356666677899999875
Q ss_pred -----CCceEEEeeecCC----CCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeC
Q psy14130 250 -----TGLVISQGVCHPG----TRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDH 320 (494)
Q Consensus 250 -----~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~ 320 (494)
+++.+....++-. .-...+.|+|. ..++++= .....=-+++++....... ..+...+-|.|.+|.+
T Consensus 91 ~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk-~~iL~VL---T~~dvSV~~sV~~d~srVk-aDi~~~G~IhCACWT~ 165 (671)
T PF15390_consen 91 PSTTERNKLLMSQTCEIREPFPVLPQGCVWHPK-KAILTVL---TARDVSVLPSVHCDSSRVK-ADIKTSGLIHCACWTK 165 (671)
T ss_pred cCccccccceeeeeeeccCCcccCCCcccccCC-CceEEEE---ecCceeEeeeeeeCCceEE-EeccCCceEEEEEecC
Confidence 2333333322221 12457889998 4555553 1233334556664433332 3446778899999999
Q ss_pred CCCEEEEEEeCCCcEEEEEeeCCCce-EEecccccCCCCeeEEEEecCCcee
Q psy14130 321 DTRILFLAGKGDGNIRYYELTNERPY-IHFLNQSLSGAPQRGLGFMPKRGCD 371 (494)
Q Consensus 321 ~~~~l~~~g~~dg~i~~wd~~~~~~~-~~~~~~~~~~~~v~~~~~~p~~~~~ 371 (494)
||+.|+++-+..=.-++||-...... ..+..-+.-++.|.++.-.-+....
T Consensus 166 DG~RLVVAvGSsLHSyiWd~~qKtL~~CsfcPVFdv~~~Icsi~AT~dsqVA 217 (671)
T PF15390_consen 166 DGQRLVVAVGSSLHSYIWDSAQKTLHRCSFCPVFDVGGYICSIEATVDSQVA 217 (671)
T ss_pred cCCEEEEEeCCeEEEEEecCchhhhhhCCcceeecCCCceEEEEEeccceEE
Confidence 99999666655555678875443210 1122223334556665554444433
|
|
| >PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length | Back alignment and domain information |
|---|
Probab=95.30 E-value=1.4 Score=45.17 Aligned_cols=110 Identities=15% Similarity=0.207 Sum_probs=72.0
Q ss_pred EEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEec-CCCCceEEEEEcC--CCCEEEEEeCCCeEEEEeCC-----C
Q psy14130 179 VGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVID-CHPDVINCLSFNR--DGSRLVTTCKDKTVRVLDPR-----T 250 (494)
Q Consensus 179 V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~h~~~v~~l~~~~--~~~~l~s~~~d~~v~iwd~~-----~ 250 (494)
..-+.-+..+ ...+.-+....+.|||.+.+.....-. ...+.|.++.|.. +|+.+++.+-...|.+|--. .
T Consensus 32 ~~li~gss~~-k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~ 110 (631)
T PF12234_consen 32 PSLISGSSIK-KIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTN 110 (631)
T ss_pred cceEeecccC-cEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhc
Confidence 3444445554 344444445689999998886433322 3578899999965 88999999999999998531 1
Q ss_pred ----CceEEEe--eecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeC
Q psy14130 251 ----GLVISQG--VCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDE 295 (494)
Q Consensus 251 ----~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~ 295 (494)
...+.++ ..++...+....|.++ +.++++. ++++.|+|-
T Consensus 111 ~~p~w~~i~~i~i~~~T~h~Igds~Wl~~-G~LvV~s-----GNqlfv~dk 155 (631)
T PF12234_consen 111 KGPSWAPIRKIDISSHTPHPIGDSIWLKD-GTLVVGS-----GNQLFVFDK 155 (631)
T ss_pred CCcccceeEEEEeecCCCCCccceeEecC-CeEEEEe-----CCEEEEECC
Confidence 1133332 4455444888999998 4555444 578999984
|
This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits. |
| >PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2 | Back alignment and domain information |
|---|
Probab=95.25 E-value=2.2 Score=38.47 Aligned_cols=166 Identities=15% Similarity=0.090 Sum_probs=97.6
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcC
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNR 229 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~ 229 (494)
.|+.+|+.+++... ...+.. .----.++...+ .+..-.-.++...+||..+-+.+.++. ..+.=..++ .
T Consensus 69 ~l~~~d~~tg~~~~-----~~~l~~-~~FgEGit~~~d--~l~qLTWk~~~~f~yd~~tl~~~~~~~-y~~EGWGLt--~ 137 (264)
T PF05096_consen 69 SLRKVDLETGKVLQ-----SVPLPP-RYFGEGITILGD--KLYQLTWKEGTGFVYDPNTLKKIGTFP-YPGEGWGLT--S 137 (264)
T ss_dssp EEEEEETTTSSEEE-----EEE-TT-T--EEEEEEETT--EEEEEESSSSEEEEEETTTTEEEEEEE--SSS--EEE--E
T ss_pred EEEEEECCCCcEEE-----EEECCc-cccceeEEEECC--EEEEEEecCCeEEEEccccceEEEEEe-cCCcceEEE--c
Confidence 59999999984321 112221 111223444433 355555668899999999999888876 344556666 4
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceEEEeeecCC----CCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEe
Q psy14130 230 DGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPG----TRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALE 305 (494)
Q Consensus 230 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~ 305 (494)
||..|+.+....+|+++|+.+-+....+.-... ...+.+.|. ++.+++--+ ....|...|..++.....+.
T Consensus 138 dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i--~G~IyANVW---~td~I~~Idp~tG~V~~~iD 212 (264)
T PF05096_consen 138 DGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI--NGKIYANVW---QTDRIVRIDPETGKVVGWID 212 (264)
T ss_dssp CSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE--TTEEEEEET---TSSEEEEEETTT-BEEEEEE
T ss_pred CCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEE--cCEEEEEeC---CCCeEEEEeCCCCeEEEEEE
Confidence 677777777788999999998887666643322 125556666 367777774 34455556777654322111
Q ss_pred e-------------ecCCCceEEeEEeCCCCEEEEEEeC
Q psy14130 306 T-------------VDSSSGVLFPYYDHDTRILFLAGKG 331 (494)
Q Consensus 306 ~-------------~~~~~~v~~~~~~~~~~~l~~~g~~ 331 (494)
. .....-.+.++|+|.+..+++||..
T Consensus 213 ls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTGK~ 251 (264)
T PF05096_consen 213 LSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTGKL 251 (264)
T ss_dssp -HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEETT
T ss_pred hhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEeCC
Confidence 0 0012345679999999999999953
|
3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X. |
| >KOG2444|consensus | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.11 Score=45.01 Aligned_cols=106 Identities=12% Similarity=0.120 Sum_probs=62.2
Q ss_pred CEEEEEeCCCeEEEEECCCCeEE-EEecC-CCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceE
Q psy14130 190 NVVASAGFDYLIILWDVGKGEAL-TVIDC-HPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSK 267 (494)
Q Consensus 190 ~~l~s~s~d~~v~iwd~~~~~~~-~~~~~-h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~ 267 (494)
.-++.|+.+|.|.+|....-... ..+.. -....+.+.-..++.+.++++.|+.||.|++.-++.+.....|.......
T Consensus 71 ~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~ 150 (238)
T KOG2444|consen 71 AKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEE 150 (238)
T ss_pred ceEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCceeeeeccccCCCcce
Confidence 56888999999999998622111 11111 11222333334466789999999999999999888776666666322333
Q ss_pred EEEECCCCeEEEEEecCCCCceEEEEeCCC
Q psy14130 268 AVFIGDTGRIVTTGFSRHSDRQVGLWDEND 297 (494)
Q Consensus 268 ~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~ 297 (494)
...+..+..+..+- -+.|..++.|++..
T Consensus 151 ~ivv~sd~~i~~a~--~S~d~~~k~W~ve~ 178 (238)
T KOG2444|consen 151 LIVVGSDEFLKIAD--TSHDRVLKKWNVEK 178 (238)
T ss_pred eEEecCCceEEeec--cccchhhhhcchhh
Confidence 33333323333330 02566666666553
|
|
| >PHA03098 kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=95.07 E-value=1.7 Score=44.66 Aligned_cols=147 Identities=14% Similarity=0.161 Sum_probs=68.0
Q ss_pred CEEEEEeCC-----CeEEEEECCCCeEEE--EecCCCCceEEEEEcCCCCEEEEEeCC------CeEEEEeCCCCceEEE
Q psy14130 190 NVVASAGFD-----YLIILWDVGKGEALT--VIDCHPDVINCLSFNRDGSRLVTTCKD------KTVRVLDPRTGLVISQ 256 (494)
Q Consensus 190 ~~l~s~s~d-----~~v~iwd~~~~~~~~--~~~~h~~~v~~l~~~~~~~~l~s~~~d------~~v~iwd~~~~~~~~~ 256 (494)
.+++.|+.+ ..+..||+.+++-.. .+...... .+++ .-+++.++.|+.+ ..+..||+.+++-...
T Consensus 344 ~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~lp~~r~~-~~~~-~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~ 421 (534)
T PHA03098 344 RIYVIGGIYNSISLNTVESWKPGESKWREEPPLIFPRYN-PCVV-NVNNLIYVIGGISKNDELLKTVECFSLNTNKWSKG 421 (534)
T ss_pred EEEEEeCCCCCEecceEEEEcCCCCceeeCCCcCcCCcc-ceEE-EECCEEEEECCcCCCCcccceEEEEeCCCCeeeec
Confidence 577888765 357788887664221 11111111 1122 2256677777632 4688999987653221
Q ss_pred eeecCCCCceEEEEECCCCeEEEEE-ecCCC----CceEEEEeCCCCCCceeEeeecCC-CceEEeEEeCCCCEEEEEEe
Q psy14130 257 GVCHPGTRSSKAVFIGDTGRIVTTG-FSRHS----DRQVGLWDENDLNTPLALETVDSS-SGVLFPYYDHDTRILFLAGK 330 (494)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~l~~~g-~~~~~----d~~i~iwd~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~g~ 330 (494)
-..........++.. + +.+++.| ++... -..+.+||..+..-.. ....... .....+.+ ++ .|++.|+
T Consensus 422 ~~~p~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~-~~~~~~~r~~~~~~~~--~~-~iyv~GG 495 (534)
T PHA03098 422 SPLPISHYGGCAIYH-D-GKIYVIGGISYIDNIKVYNIVESYNPVTNKWTE-LSSLNFPRINASLCIF--NN-KIYVVGG 495 (534)
T ss_pred CCCCccccCceEEEE-C-CEEEEECCccCCCCCcccceEEEecCCCCceee-CCCCCcccccceEEEE--CC-EEEEEcC
Confidence 111111101222222 3 5666666 11000 1238889987643211 1111111 11111222 44 4557776
Q ss_pred CC-----CcEEEEEeeCCC
Q psy14130 331 GD-----GNIRYYELTNER 344 (494)
Q Consensus 331 ~d-----g~i~~wd~~~~~ 344 (494)
.+ +.|.+||..+.+
T Consensus 496 ~~~~~~~~~v~~yd~~~~~ 514 (534)
T PHA03098 496 DKYEYYINEIEVYDDKTNT 514 (534)
T ss_pred CcCCcccceeEEEeCCCCE
Confidence 54 357777776654
|
|
| >TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain | Back alignment and domain information |
|---|
Probab=95.07 E-value=1.7 Score=42.15 Aligned_cols=152 Identities=10% Similarity=0.017 Sum_probs=81.5
Q ss_pred CceEEEEEcCCCCEEEEEe-----------CCC-eEEEEeCCCC--c--eEEEeeecCCCCceEEEEECCCCeEEEEEec
Q psy14130 220 DVINCLSFNRDGSRLVTTC-----------KDK-TVRVLDPRTG--L--VISQGVCHPGTRSSKAVFIGDTGRIVTTGFS 283 (494)
Q Consensus 220 ~~v~~l~~~~~~~~l~s~~-----------~d~-~v~iwd~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 283 (494)
.....|+|.++|+++++-. ..+ .|.+++-.++ + ....+..... ....+++.++ + ++++.
T Consensus 14 ~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~-~p~Gi~~~~~-G-lyV~~-- 88 (367)
T TIGR02604 14 RNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELS-MVTGLAVAVG-G-VYVAT-- 88 (367)
T ss_pred CCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCC-CccceeEecC-C-EEEeC--
Confidence 4567889999999877653 223 7777765433 3 1223322222 2577888877 4 55554
Q ss_pred CCCCceEEEEeCCCC-----CCceeEeeecC-----CCceEEeEEeCCCCEEEEEEeC------------------CCcE
Q psy14130 284 RHSDRQVGLWDENDL-----NTPLALETVDS-----SSGVLFPYYDHDTRILFLAGKG------------------DGNI 335 (494)
Q Consensus 284 ~~~d~~i~iwd~~~~-----~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~g~~------------------dg~i 335 (494)
.....++.|.... ........+.. ......+.|.|||.+.+..|+. .|.|
T Consensus 89 --~~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i 166 (367)
T TIGR02604 89 --PPDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGL 166 (367)
T ss_pred --CCeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceE
Confidence 3443344454321 11111222211 2446789999999876444421 1345
Q ss_pred EEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccceeEEEE
Q psy14130 336 RYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFK 382 (494)
Q Consensus 336 ~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~ 382 (494)
.-++..+++. ..+... .....+++|+|+|.++++..+....+.
T Consensus 167 ~r~~pdg~~~-e~~a~G---~rnp~Gl~~d~~G~l~~tdn~~~~~~~ 209 (367)
T TIGR02604 167 FRYNPDGGKL-RVVAHG---FQNPYGHSVDSWGDVFFCDNDDPPLCR 209 (367)
T ss_pred EEEecCCCeE-EEEecC---cCCCccceECCCCCEEEEccCCCceeE
Confidence 5555544432 122211 233578999999988887643333333
|
All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs. |
| >PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases | Back alignment and domain information |
|---|
Probab=95.07 E-value=3.3 Score=39.45 Aligned_cols=204 Identities=16% Similarity=0.143 Sum_probs=99.9
Q ss_pred cccccEEEEEEcCC---CCCEEEEEeCC--------CeEEEEECCCC-------eEE-EEecC---CCCceEEEEEcCCC
Q psy14130 174 GHKRRVGYIEWHPT---AENVVASAGFD--------YLIILWDVGKG-------EAL-TVIDC---HPDVINCLSFNRDG 231 (494)
Q Consensus 174 ~h~~~V~~~~~~p~---~~~~l~s~s~d--------~~v~iwd~~~~-------~~~-~~~~~---h~~~v~~l~~~~~~ 231 (494)
........++++|+ ...+.++-+.. ..|.-|....+ +.+ ..+.. ....-..|.|.|||
T Consensus 46 ~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG 125 (331)
T PF07995_consen 46 DGERGLLGIAFHPDFASNGYLYVYYTNADEDGGDNDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDG 125 (331)
T ss_dssp STTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSSEEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTS
T ss_pred cccCCcccceeccccCCCCEEEEEEEcccCCCCCcceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCC
Confidence 45567899999994 11333333321 23444544433 111 12222 23445679999999
Q ss_pred CEEEEEeCC-------------CeEEEEeCCCCce-------------EEE-eeecCCCCceEEEEECCCCeEEEEEecC
Q psy14130 232 SRLVTTCKD-------------KTVRVLDPRTGLV-------------ISQ-GVCHPGTRSSKAVFIGDTGRIVTTGFSR 284 (494)
Q Consensus 232 ~~l~s~~~d-------------~~v~iwd~~~~~~-------------~~~-~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 284 (494)
.+.++.+.. |.|.-.+.. ++. ... -.++.. ...++|.|..+.|+++-...
T Consensus 126 ~LYvs~G~~~~~~~~~~~~~~~G~ilri~~d-G~~p~dnP~~~~~~~~~~i~A~GlRN--~~~~~~d~~tg~l~~~d~G~ 202 (331)
T PF07995_consen 126 KLYVSVGDGGNDDNAQDPNSLRGKILRIDPD-GSIPADNPFVGDDGADSEIYAYGLRN--PFGLAFDPNTGRLWAADNGP 202 (331)
T ss_dssp EEEEEEB-TTTGGGGCSTTSSTTEEEEEETT-SSB-TTSTTTTSTTSTTTEEEE--SE--EEEEEEETTTTEEEEEEE-S
T ss_pred cEEEEeCCCCCcccccccccccceEEEeccc-CcCCCCCccccCCCceEEEEEeCCCc--cccEEEECCCCcEEEEccCC
Confidence 877766543 233333332 110 000 112222 57899999877787765311
Q ss_pred CCCceEEEEeCCCCCC---c-----------------------eeEeeecCCCceEEeEEeCCCC------EEEEEEeCC
Q psy14130 285 HSDRQVGLWDENDLNT---P-----------------------LALETVDSSSGVLFPYYDHDTR------ILFLAGKGD 332 (494)
Q Consensus 285 ~~d~~i~iwd~~~~~~---~-----------------------~~~~~~~~~~~v~~~~~~~~~~------~l~~~g~~d 332 (494)
.....|.+-. .+.. | .......++..+..+.|-.... .++++.-..
T Consensus 203 ~~~dein~i~--~G~nYGWP~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~~~~~~~~~ 280 (331)
T PF07995_consen 203 DGWDEINRIE--PGGNYGWPYCEGGPKYSGPPIGDAPSCPGFVPPVFAYPPHSAPTGIIFYRGSAFPEYRGDLFVADYGG 280 (331)
T ss_dssp SSSEEEEEE---TT-B--TTTBSSSCSTTSS-ECTGSS-TTS---SEEETTT--EEEEEEE-SSSSGGGTTEEEEEETTT
T ss_pred CCCcEEEEec--cCCcCCCCCCcCCCCCCCCccccccCCCCcCccceeecCccccCceEEECCccCccccCcEEEecCCC
Confidence 1122333322 1110 0 0111233445566666654322 243666667
Q ss_pred CcEEEEEeeCCCceEEecccc-cCCCCeeEEEEecCCceeeeccceeEEEE
Q psy14130 333 GNIRYYELTNERPYIHFLNQS-LSGAPQRGLGFMPKRGCDVTQCEIFRFFK 382 (494)
Q Consensus 333 g~i~~wd~~~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~~~~~~~~~~~~~ 382 (494)
+.|...++..+........-. .....+.++++.|||.+.++.+...+||+
T Consensus 281 ~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~pDG~Lyv~~d~~G~iyR 331 (331)
T PF07995_consen 281 GRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQGPDGALYVSDDSDGKIYR 331 (331)
T ss_dssp TEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEETTSEEEEEE-TTTTEEE
T ss_pred CEEEEEeeecCCCccceEEccccCCCCceEEEEcCCCeEEEEECCCCeEeC
Confidence 789888887654322221111 12347999999999999999877777764
|
The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B .... |
| >PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation | Back alignment and domain information |
|---|
Probab=95.03 E-value=2.7 Score=38.27 Aligned_cols=156 Identities=15% Similarity=0.045 Sum_probs=92.3
Q ss_pred cEEEEEEcCCCCCEEEEEe--CCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCceE
Q psy14130 178 RVGYIEWHPTAENVVASAG--FDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLD-PRTGLVI 254 (494)
Q Consensus 178 ~V~~~~~~p~~~~~l~s~s--~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd-~~~~~~~ 254 (494)
.+.+.++++++..+.+... ....+.++.. +.....+. -...+..-.|++++...+....+...+++. ..++...
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~--~~~~~~~~-~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~ 101 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPA--GGPVRPVL-TGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGE 101 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcC--CCcceeec-cCCccccccccCCCCEEEEEcCCCceEEEEecCCCcce
Confidence 6889999999954444442 3345555554 33333322 223778889999988777777677777773 3444422
Q ss_pred -EEeeecCCC-CceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCC-C-ceeE----eee-cCCCceEEeEEeCCCCEE
Q psy14130 255 -SQGVCHPGT-RSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLN-T-PLAL----ETV-DSSSGVLFPYYDHDTRIL 325 (494)
Q Consensus 255 -~~~~~~~~~-~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~-~-~~~~----~~~-~~~~~v~~~~~~~~~~~l 325 (494)
......... .+..+.++|++.+++...- ...++.|.+--+.... . +..+ ... .....+..+.|.+++.++
T Consensus 102 ~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~-~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~ 180 (253)
T PF10647_consen 102 PVEVDWPGLRGRITALRVSPDGTRVAVVVE-DGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLV 180 (253)
T ss_pred eEEecccccCCceEEEEECCCCcEEEEEEe-cCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCCEEE
Confidence 222222111 4899999999888766651 1235677776543211 1 1111 111 223578899999999988
Q ss_pred EEEEeCCCcEEE
Q psy14130 326 FLAGKGDGNIRY 337 (494)
Q Consensus 326 ~~~g~~dg~i~~ 337 (494)
+++...++.+..
T Consensus 181 V~~~~~~~~~~~ 192 (253)
T PF10647_consen 181 VLGRSAGGPVVR 192 (253)
T ss_pred EEeCCCCCceeE
Confidence 777666665555
|
It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues. |
| >PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal | Back alignment and domain information |
|---|
Probab=95.02 E-value=1.4 Score=34.97 Aligned_cols=112 Identities=13% Similarity=0.079 Sum_probs=69.7
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEeCCCCc--------eEEEeeecCCCCceEEEEEC----CCCeEEEEEecCCCCceEE
Q psy14130 224 CLSFNRDGSRLVTTCKDKTVRVLDPRTGL--------VISQGVCHPGTRSSKAVFIG----DTGRIVTTGFSRHSDRQVG 291 (494)
Q Consensus 224 ~l~~~~~~~~l~s~~~d~~v~iwd~~~~~--------~~~~~~~~~~~~~~~~~~~~----~~~~l~~~g~~~~~d~~i~ 291 (494)
.-.|......|+.++.-++|.|+++.... .+..+..... +.+++.-+ ++..+|..| ....+.
T Consensus 3 iGkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LNin~~--italaaG~l~~~~~~D~LliG----t~t~ll 76 (136)
T PF14781_consen 3 IGKFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLNINQE--ITALAAGRLKPDDGRDCLLIG----TQTSLL 76 (136)
T ss_pred EEEeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEECCCc--eEEEEEEecCCCCCcCEEEEe----ccceEE
Confidence 34577677789999999999999987442 3344433322 55555433 345678888 688899
Q ss_pred EEeCCCCCCceeEeeecCCCceEEeEE---eCCCCEEEEEEeCCCcEEEEEeeCCCc
Q psy14130 292 LWDENDLNTPLALETVDSSSGVLFPYY---DHDTRILFLAGKGDGNIRYYELTNERP 345 (494)
Q Consensus 292 iwd~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~l~~~g~~dg~i~~wd~~~~~~ 345 (494)
.||+.+....... +...++.++.+ ......|+++| +...|.-||....+.
T Consensus 77 aYDV~~N~d~Fyk---e~~DGvn~i~~g~~~~~~~~l~ivG-Gncsi~Gfd~~G~e~ 129 (136)
T PF14781_consen 77 AYDVENNSDLFYK---EVPDGVNAIVIGKLGDIPSPLVIVG-GNCSIQGFDYEGNEI 129 (136)
T ss_pred EEEcccCchhhhh---hCccceeEEEEEecCCCCCcEEEEC-ceEEEEEeCCCCcEE
Confidence 9999875543322 23345555544 33234453444 677888888766554
|
|
| >PHA03098 kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=94.86 E-value=2.3 Score=43.65 Aligned_cols=148 Identities=13% Similarity=0.008 Sum_probs=70.1
Q ss_pred CEEEEEeCCC------eEEEEECCCCeEEEE--ecCCCCceEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCCceEEE
Q psy14130 190 NVVASAGFDY------LIILWDVGKGEALTV--IDCHPDVINCLSFNRDGSRLVTTCKD-----KTVRVLDPRTGLVISQ 256 (494)
Q Consensus 190 ~~l~s~s~d~------~v~iwd~~~~~~~~~--~~~h~~~v~~l~~~~~~~~l~s~~~d-----~~v~iwd~~~~~~~~~ 256 (494)
.+++.|+.++ .+..||+.+.+-... +.........+.+ ++.+++.|+.+ ..+..||+.+++-...
T Consensus 296 ~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 373 (534)
T PHA03098 296 VIYFIGGMNKNNLSVNSVVSYDTKTKSWNKVPELIYPRKNPGVTVF--NNRIYVIGGIYNSISLNTVESWKPGESKWREE 373 (534)
T ss_pred EEEEECCCcCCCCeeccEEEEeCCCCeeeECCCCCcccccceEEEE--CCEEEEEeCCCCCEecceEEEEcCCCCceeeC
Confidence 4677776543 577888877654221 1111111222222 57777777765 3577899887663221
Q ss_pred eeecCCCCceEEEEECCCCeEEEEEe-cCCC--CceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCC
Q psy14130 257 GVCHPGTRSSKAVFIGDTGRIVTTGF-SRHS--DRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDG 333 (494)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~l~~~g~-~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg 333 (494)
-..........++. - ++.+++.|. .... -..+..||+.+..-.. .........-.++ ...+ ..||+.|+.++
T Consensus 374 ~~lp~~r~~~~~~~-~-~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~-~~~~p~~r~~~~~-~~~~-~~iyv~GG~~~ 448 (534)
T PHA03098 374 PPLIFPRYNPCVVN-V-NNLIYVIGGISKNDELLKTVECFSLNTNKWSK-GSPLPISHYGGCA-IYHD-GKIYVIGGISY 448 (534)
T ss_pred CCcCcCCccceEEE-E-CCEEEEECCcCCCCcccceEEEEeCCCCeeee-cCCCCccccCceE-EEEC-CEEEEECCccC
Confidence 11111110112222 2 356777661 0000 1468889987533211 1111111001111 2223 45567776432
Q ss_pred --------cEEEEEeeCCC
Q psy14130 334 --------NIRYYELTNER 344 (494)
Q Consensus 334 --------~i~~wd~~~~~ 344 (494)
.+.+||..+++
T Consensus 449 ~~~~~~~~~v~~yd~~~~~ 467 (534)
T PHA03098 449 IDNIKVYNIVESYNPVTNK 467 (534)
T ss_pred CCCCcccceEEEecCCCCc
Confidence 38888988765
|
|
| >PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=94.85 E-value=3.5 Score=38.66 Aligned_cols=112 Identities=13% Similarity=0.092 Sum_probs=67.8
Q ss_pred EEEEEeCCCeEEEEECCCCeE--EEEecCC----------CCceEEEEEcCCCCEEEEEeC--------C--CeEEEEeC
Q psy14130 191 VVASAGFDYLIILWDVGKGEA--LTVIDCH----------PDVINCLSFNRDGSRLVTTCK--------D--KTVRVLDP 248 (494)
Q Consensus 191 ~l~s~s~d~~v~iwd~~~~~~--~~~~~~h----------~~~v~~l~~~~~~~~l~s~~~--------d--~~v~iwd~ 248 (494)
.++--+.+|.|+--|+..... ...+..- .+.-.-+++++..+.|+..-. | ..|.++|+
T Consensus 197 ~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~ 276 (342)
T PF06433_consen 197 RLYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDL 276 (342)
T ss_dssp EEEEEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEET
T ss_pred eEEEEecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEEC
Confidence 455567888888888865542 2222210 123345778776655554322 1 25888999
Q ss_pred CCCceEEEeeecCCCCceEEEEECCCC-eEEEEEecCCCCceEEEEeCCCCCCceeEeee
Q psy14130 249 RTGLVISQGVCHPGTRSSKAVFIGDTG-RIVTTGFSRHSDRQVGLWDENDLNTPLALETV 307 (494)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~ 307 (494)
.+++.+..+..... +.++..+.+.. .|++.. ..++.+.+||..+++.......+
T Consensus 277 ~t~krv~Ri~l~~~--~~Si~Vsqd~~P~L~~~~---~~~~~l~v~D~~tGk~~~~~~~l 331 (342)
T PF06433_consen 277 KTHKRVARIPLEHP--IDSIAVSQDDKPLLYALS---AGDGTLDVYDAATGKLVRSIEQL 331 (342)
T ss_dssp TTTEEEEEEEEEEE--ESEEEEESSSS-EEEEEE---TTTTEEEEEETTT--EEEEE---
T ss_pred CCCeEEEEEeCCCc--cceEEEccCCCcEEEEEc---CCCCeEEEEeCcCCcEEeehhcc
Confidence 99999988875332 56777777755 455555 46899999999987654444443
|
4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). |
| >PHA02790 Kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=94.82 E-value=2.5 Score=42.62 Aligned_cols=142 Identities=14% Similarity=0.023 Sum_probs=68.7
Q ss_pred CEEEEEeCC--CeEEEEECCCCeEEE--EecCCCCceEEEEEcCCCCEEEEEeCC---CeEEEEeCCCCceEEEeeecCC
Q psy14130 190 NVVASAGFD--YLIILWDVGKGEALT--VIDCHPDVINCLSFNRDGSRLVTTCKD---KTVRVLDPRTGLVISQGVCHPG 262 (494)
Q Consensus 190 ~~l~s~s~d--~~v~iwd~~~~~~~~--~~~~h~~~v~~l~~~~~~~~l~s~~~d---~~v~iwd~~~~~~~~~~~~~~~ 262 (494)
.+.+.|+.+ ..+..||..+++-.. .+.........+. -+|+..+.|+.+ ..+..||+++.+-...-.....
T Consensus 320 ~iYviGG~~~~~sve~ydp~~n~W~~~~~l~~~r~~~~~~~--~~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~ 397 (480)
T PHA02790 320 KLYVVGGLPNPTSVERWFHGDAAWVNMPSLLKPRCNPAVAS--INNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYP 397 (480)
T ss_pred EEEEECCcCCCCceEEEECCCCeEEECCCCCCCCcccEEEE--ECCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCc
Confidence 577777754 357888887654221 2221111111222 257777777755 3477899987653221111111
Q ss_pred CCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCC-----CcEEE
Q psy14130 263 TRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGD-----GNIRY 337 (494)
Q Consensus 263 ~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~d-----g~i~~ 337 (494)
..-..++ . -++.|++.| + .+.+||.++..-.. .........-..++. -++ .||+.|+.+ ..+..
T Consensus 398 r~~~~~~-~-~~~~IYv~G---G---~~e~ydp~~~~W~~-~~~m~~~r~~~~~~v-~~~-~IYviGG~~~~~~~~~ve~ 466 (480)
T PHA02790 398 HYKSCAL-V-FGRRLFLVG---R---NAEFYCESSNTWTL-IDDPIYPRDNPELII-VDN-KLLLIGGFYRGSYIDTIEV 466 (480)
T ss_pred cccceEE-E-ECCEEEEEC---C---ceEEecCCCCcEeE-cCCCCCCccccEEEE-ECC-EEEEECCcCCCcccceEEE
Confidence 1011222 2 236888887 2 46788887543211 111111111111222 244 456888754 34666
Q ss_pred EEeeCCC
Q psy14130 338 YELTNER 344 (494)
Q Consensus 338 wd~~~~~ 344 (494)
||..+++
T Consensus 467 Yd~~~~~ 473 (480)
T PHA02790 467 YNNRTYS 473 (480)
T ss_pred EECCCCe
Confidence 7766554
|
|
| >KOG3630|consensus | Back alignment and domain information |
|---|
Probab=94.61 E-value=0.45 Score=50.63 Aligned_cols=148 Identities=12% Similarity=-0.008 Sum_probs=92.2
Q ss_pred CceEEEEEcCCCCEEEE--EeCCCeEEEEeCCCCceEE-----Eeeec-----CCCCceEEEEECCCCeEEEEEecCCCC
Q psy14130 220 DVINCLSFNRDGSRLVT--TCKDKTVRVLDPRTGLVIS-----QGVCH-----PGTRSSKAVFIGDTGRIVTTGFSRHSD 287 (494)
Q Consensus 220 ~~v~~l~~~~~~~~l~s--~~~d~~v~iwd~~~~~~~~-----~~~~~-----~~~~~~~~~~~~~~~~l~~~g~~~~~d 287 (494)
-.|..+...+|+...++ .+.+..|..||+++-..-. -+..| .......+.|+|.-....++. ..|
T Consensus 101 ~pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~---l~d 177 (1405)
T KOG3630|consen 101 IPIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVD---LSD 177 (1405)
T ss_pred ccceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhh---ccc
Confidence 35556666677664443 3445578999987543111 11111 112255677888755555555 579
Q ss_pred ceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecC
Q psy14130 288 RQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPK 367 (494)
Q Consensus 288 ~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 367 (494)
+.|++.-+...... ....+.....++++|+|.|+.+ +.|...|++.-|...-................|.+|+|...
T Consensus 178 lsl~V~~~~~~~~~--v~s~p~t~~~Tav~WSprGKQl-~iG~nnGt~vQy~P~leik~~ip~Pp~~e~yrvl~v~Wl~t 254 (1405)
T KOG3630|consen 178 LSLRVKSTKQLAQN--VTSFPVTNSQTAVLWSPRGKQL-FIGRNNGTEVQYEPSLEIKSEIPEPPVEENYRVLSVTWLST 254 (1405)
T ss_pred cchhhhhhhhhhhh--hcccCcccceeeEEecccccee-eEecCCCeEEEeecccceeecccCCCcCCCcceeEEEEecc
Confidence 99998876543222 2223455678999999999999 88999999998876544211111111122467999999988
Q ss_pred Cceeee
Q psy14130 368 RGCDVT 373 (494)
Q Consensus 368 ~~~~~~ 373 (494)
..++|.
T Consensus 255 ~eflvv 260 (1405)
T KOG3630|consen 255 QEFLVV 260 (1405)
T ss_pred eeEEEE
Confidence 887765
|
|
| >PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length | Back alignment and domain information |
|---|
Probab=94.54 E-value=1.8 Score=44.36 Aligned_cols=113 Identities=14% Similarity=0.082 Sum_probs=73.2
Q ss_pred eEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEe--CCCCEEEEEEeCCCcEEEEEe---
Q psy14130 266 SKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYD--HDTRILFLAGKGDGNIRYYEL--- 340 (494)
Q Consensus 266 ~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~g~~dg~i~~wd~--- 340 (494)
..+.-+.- +++..+. +...++.|||.+... ......+.....|..+.|. |+++.+ ++-+....|.+|--
T Consensus 33 ~li~gss~-~k~a~V~---~~~~~LtIWD~~~~~-lE~~~~f~~~~~I~dLDWtst~d~qsi-LaVGf~~~v~l~~Q~R~ 106 (631)
T PF12234_consen 33 SLISGSSI-KKIAVVD---SSRSELTIWDTRSGV-LEYEESFSEDDPIRDLDWTSTPDGQSI-LAVGFPHHVLLYTQLRY 106 (631)
T ss_pred ceEeeccc-CcEEEEE---CCCCEEEEEEcCCcE-EEEeeeecCCCceeeceeeecCCCCEE-EEEEcCcEEEEEEccch
Confidence 33444443 5666666 567789999998654 2222333456778888774 788998 44457888888754
Q ss_pred --eCCCc----eEEe-cccccCCCCeeEEEEecCCceeeeccceeEEEEeeC
Q psy14130 341 --TNERP----YIHF-LNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 341 --~~~~~----~~~~-~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~~ 385 (494)
....| +... +..+ .+.+|.+.+|.++|.+++..+..+.+++-.-
T Consensus 107 dy~~~~p~w~~i~~i~i~~~-T~h~Igds~Wl~~G~LvV~sGNqlfv~dk~~ 157 (631)
T PF12234_consen 107 DYTNKGPSWAPIRKIDISSH-TPHPIGDSIWLKDGTLVVGSGNQLFVFDKWL 157 (631)
T ss_pred hhhcCCcccceeEEEEeecC-CCCCccceeEecCCeEEEEeCCEEEEECCCc
Confidence 22222 1121 1122 2468999999999999999888888886444
|
This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits. |
| >TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family | Back alignment and domain information |
|---|
Probab=94.52 E-value=7.9 Score=41.28 Aligned_cols=157 Identities=14% Similarity=0.122 Sum_probs=86.1
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEEecCCCCceE-------------EEEEcC--CCCEEEEEeC----------CCeEE
Q psy14130 190 NVVASAGFDYLIILWDVGKGEALTVIDCHPDVIN-------------CLSFNR--DGSRLVTTCK----------DKTVR 244 (494)
Q Consensus 190 ~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~-------------~l~~~~--~~~~l~s~~~----------d~~v~ 244 (494)
..++.++.|+.+.-.|.++|+.+..+.. .+.|. .+.-.| .+..++.|+. +|.|+
T Consensus 261 ~rV~~~T~Dg~LiALDA~TGk~~W~fg~-~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~ 339 (764)
T TIGR03074 261 RRIILPTSDARLIALDADTGKLCEDFGN-NGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIR 339 (764)
T ss_pred CEEEEecCCCeEEEEECCCCCEEEEecC-CCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEE
Confidence 4778888899999999999998877642 22210 111122 1345566643 68899
Q ss_pred EEeCCCCceEEEeeecC----------------CCCc-eEEEEECCCCeEEEEEec---------------CCCCceEEE
Q psy14130 245 VLDPRTGLVISQGVCHP----------------GTRS-SKAVFIGDTGRIVTTGFS---------------RHSDRQVGL 292 (494)
Q Consensus 245 iwd~~~~~~~~~~~~~~----------------~~~~-~~~~~~~~~~~l~~~g~~---------------~~~d~~i~i 292 (494)
-+|.++|+.+-.+..-. +... ...++.+..+.++ .+.. ....+.|.-
T Consensus 340 A~Da~TGkl~W~~~~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glvy-~ptGn~~pd~~g~~r~~~~n~y~~slvA 418 (764)
T TIGR03074 340 AFDVNTGALVWAWDPGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLVY-LPMGNQTPDQWGGDRTPADEKYSSSLVA 418 (764)
T ss_pred EEECCCCcEeeEEecCCCCcccCCCCCCEeccCCCCccCceEEcCCCCeEE-EeCCCccccccCCccccCcccccceEEE
Confidence 99999999877664210 0001 2233333322222 2200 011234455
Q ss_pred EeCCCCCCceeEeeecC-------CCceEEeEEeC-CCC--EEEEEEeCCCcEEEEEeeCCCceEE
Q psy14130 293 WDENDLNTPLALETVDS-------SSGVLFPYYDH-DTR--ILFLAGKGDGNIRYYELTNERPYIH 348 (494)
Q Consensus 293 wd~~~~~~~~~~~~~~~-------~~~v~~~~~~~-~~~--~l~~~g~~dg~i~~wd~~~~~~~~~ 348 (494)
.|+++++..-.++...| .....-+.+.. +|+ -+++.++.+|.++++|-++|+++..
T Consensus 419 LD~~TGk~~W~~Q~~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~~ 484 (764)
T TIGR03074 419 LDATTGKERWVFQTVHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIVP 484 (764)
T ss_pred EeCCCCceEEEecccCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEee
Confidence 56666554333332211 11122222322 553 2448888999999999999987644
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases. |
| >KOG2377|consensus | Back alignment and domain information |
|---|
Probab=94.39 E-value=1.5 Score=42.20 Aligned_cols=129 Identities=9% Similarity=0.178 Sum_probs=80.6
Q ss_pred CCceEEEeeecCCC-----CceEEEEECCCCeEEEEEecCCCCceEEEEeCCC--CCCceeEeeecCCCceEEeEEeCCC
Q psy14130 250 TGLVISQGVCHPGT-----RSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEND--LNTPLALETVDSSSGVLFPYYDHDT 322 (494)
Q Consensus 250 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~--~~~~~~~~~~~~~~~v~~~~~~~~~ 322 (494)
+|..-+.+..|... ..+.+-|...+..++++- .|.+.=|-... ...+..+... ..+++.++.|++|.
T Consensus 5 sGalyhelihhPslfcnipesngvFfDDaNkqlfavr-----SggatgvvvkgpndDVpiSfdm~-d~G~I~SIkFSlDn 78 (657)
T KOG2377|consen 5 SGALYHELIHHPSLFCNIPESNGVFFDDANKQLFAVR-----SGGATGVVVKGPNDDVPISFDMD-DKGEIKSIKFSLDN 78 (657)
T ss_pred CcceEEEEecCchhhccCCcccceeeccCcceEEEEe-----cCCeeEEEEeCCCCCCCceeeec-CCCceeEEEeccCc
Confidence 34444555555421 123344443334444444 55566666543 3344444333 44689999999999
Q ss_pred CEEEEEEeCCCcEEEEEeeCCCceEEecccccCCC-CeeEEEEecCCceeeeccceeEEEEeeC
Q psy14130 323 RILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGA-PQRGLGFMPKRGCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 323 ~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~-~v~~~~~~p~~~~~~~~~~~~~~~~l~~ 385 (494)
+.| +.--.|++|.+++....++.......++.+. .|.+++|+....+....+.-+.+|....
T Consensus 79 kil-AVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s~e~A~i~~~G~e~y~v~p 141 (657)
T KOG2377|consen 79 KIL-AVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSSTEIAFITDQGIEFYQVLP 141 (657)
T ss_pred ceE-EEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecCeeEEEEecCCeEEEEEch
Confidence 999 8888999999999976665444444444443 4999999988766666666666776554
|
|
| >PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=94.38 E-value=4.5 Score=37.92 Aligned_cols=183 Identities=14% Similarity=0.146 Sum_probs=105.3
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECC-CCeEEEE----ecCCCCce-
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVG-KGEALTV----IDCHPDVI- 222 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~-~~~~~~~----~~~h~~~v- 222 (494)
..|.|-|+..+ +.+.++. -.+ |.-.-|.++.-+.+-+.||.+.-..+. .|+...+ |..-.+++
T Consensus 118 ~SVtVVDl~~~-------kvv~ei~-~PG---C~~iyP~~~~~F~~lC~DGsl~~v~Ld~~Gk~~~~~t~~F~~~~dp~f 186 (342)
T PF06433_consen 118 TSVTVVDLAAK-------KVVGEID-TPG---CWLIYPSGNRGFSMLCGDGSLLTVTLDADGKEAQKSTKVFDPDDDPLF 186 (342)
T ss_dssp EEEEEEETTTT-------EEEEEEE-GTS---EEEEEEEETTEEEEEETTSCEEEEEETSTSSEEEEEEEESSTTTS-B-
T ss_pred CeEEEEECCCC-------ceeeeec-CCC---EEEEEecCCCceEEEecCCceEEEEECCCCCEeEeeccccCCCCcccc
Confidence 35888888777 3333222 111 222234444567788889999888887 4554332 22222323
Q ss_pred EEEEEcCCCCEEEEEeCCCeEEEEeCCCCce--EEEeeec----------CCCCceEEEEECCCCeEEEEEecC----CC
Q psy14130 223 NCLSFNRDGSRLVTTCKDKTVRVLDPRTGLV--ISQGVCH----------PGTRSSKAVFIGDTGRIVTTGFSR----HS 286 (494)
Q Consensus 223 ~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~--~~~~~~~----------~~~~~~~~~~~~~~~~l~~~g~~~----~~ 286 (494)
..-++...+..++-.+.+|.|+--|+..... ...+..- .+. ...+++++..++|++.-..+ ..
T Consensus 187 ~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG-~Q~~A~~~~~~rlyvLMh~g~~gsHK 265 (342)
T PF06433_consen 187 EHPAYSRDGGRLYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGG-WQLIAYHAASGRLYVLMHQGGEGSHK 265 (342)
T ss_dssp S--EEETTTTEEEEEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-S-SS-EEEETTTTEEEEEEEE--TT-TT
T ss_pred cccceECCCCeEEEEecCCEEEEEeccCCcccccCcccccCccccccCcCCcc-eeeeeeccccCeEEEEecCCCCCCcc
Confidence 2344555566677788999999999886652 2222111 112 35577888777777664211 11
Q ss_pred --CceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEE-EEEeCCCcEEEEEeeCCCce
Q psy14130 287 --DRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILF-LAGKGDGNIRYYELTNERPY 346 (494)
Q Consensus 287 --d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~g~~dg~i~~wd~~~~~~~ 346 (494)
..+|-++|+.+.+... .++....+.++..+.+.+-++ +....++.+.+||..+++.+
T Consensus 266 dpgteVWv~D~~t~krv~---Ri~l~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~ 325 (342)
T PF06433_consen 266 DPGTEVWVYDLKTHKRVA---RIPLEHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLV 325 (342)
T ss_dssp S-EEEEEEEETTTTEEEE---EEEEEEEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EE
T ss_pred CCceEEEEEECCCCeEEE---EEeCCCccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEE
Confidence 2367788887755433 233334577899999887553 44456899999999999864
|
4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). |
| >COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=94.32 E-value=1.4 Score=42.94 Aligned_cols=190 Identities=15% Similarity=0.136 Sum_probs=104.2
Q ss_pred CcEEEEEEcCcEEEEEcCCCCCCCCcccce---EecccccccEEEEEEc-CCCCCEEEEEeCCCeEEEEECCCCeEEEEe
Q psy14130 140 GGAFLVLPIHRVKLWYIPDGGLSGNLNEWI---MDLHGHKRRVGYIEWH-PTAENVVASAGFDYLIILWDVGKGEALTVI 215 (494)
Q Consensus 140 ~g~~~~~~~~~v~iw~~~~~~~~~~~~~~~---~~~~~h~~~V~~~~~~-p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~ 215 (494)
+.+-.|+..++|-++.....+..+ +...+ ....|..-...-+-.+ .+..-++..|..-..++--|++.|+.+..+
T Consensus 428 n~rsyVtR~n~IGVFk~~de~~Le-F~aaiknvs~~~GKSidp~K~mlh~~dssli~~dg~~~~kLykmDIErGkvveeW 506 (776)
T COG5167 428 NERSYVTRGNSIGVFKNTDEGSLE-FKAAIKNVSDDGGKSIDPEKIMLHDNDSSLIYLDGGERDKLYKMDIERGKVVEEW 506 (776)
T ss_pred ccceeEeeCCeeeeEeccCCccee-hhhhhhhccCCCCCcCChhhceeecCCcceEEecCCCcccceeeecccceeeeEe
Confidence 334455666678888765443110 00111 1122222122222233 333234455566678888899999999999
Q ss_pred cCCCCceEEEEEcCCCC-------EEEEEeCCCeEEEEeCCCCc-eE--EEeeecC-CCCceEEEEECCCCeEEEEEecC
Q psy14130 216 DCHPDVINCLSFNRDGS-------RLVTTCKDKTVRVLDPRTGL-VI--SQGVCHP-GTRSSKAVFIGDTGRIVTTGFSR 284 (494)
Q Consensus 216 ~~h~~~v~~l~~~~~~~-------~l~s~~~d~~v~iwd~~~~~-~~--~~~~~~~-~~~~~~~~~~~~~~~l~~~g~~~ 284 (494)
.-|... -+.|.|+.+ .-+.|-.+..|.-.|+|... .+ .+.+... ....++..- ...+++.+++
T Consensus 507 ~~~ddv--vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~v~esKdY~tKn~Fss~~t-TesGyIa~as--- 580 (776)
T COG5167 507 DLKDDV--VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIKVVESKDYKTKNKFSSGMT-TESGYIAAAS--- 580 (776)
T ss_pred ecCCcc--eeecCCchhHHhcCccceEEeecccceEEecccccCCceeeeeehhcccccccccccc-ccCceEEEec---
Confidence 877665 577888532 23345556667667776433 12 1221111 111222222 2335555554
Q ss_pred CCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEee
Q psy14130 285 HSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELT 341 (494)
Q Consensus 285 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~ 341 (494)
..|-|++||.-..+....+.. -...|..+..+.+|+++++++ ..++.+-|++
T Consensus 581 -~kGDirLyDRig~rAKtalP~--lG~aIk~idvta~Gk~ilaTC--k~yllL~d~~ 632 (776)
T COG5167 581 -RKGDIRLYDRIGKRAKTALPG--LGDAIKHIDVTANGKHILATC--KNYLLLTDVP 632 (776)
T ss_pred -CCCceeeehhhcchhhhcCcc--cccceeeeEeecCCcEEEEee--cceEEEEecc
Confidence 899999999543332222222 235688889999999997776 4567777764
|
|
| >TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family | Back alignment and domain information |
|---|
Probab=94.31 E-value=7.1 Score=39.87 Aligned_cols=158 Identities=15% Similarity=0.113 Sum_probs=91.9
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEEecCCC-CceE----------EEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEee
Q psy14130 190 NVVASAGFDYLIILWDVGKGEALTVIDCHP-DVIN----------CLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGV 258 (494)
Q Consensus 190 ~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~-~~v~----------~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~ 258 (494)
..++.++.++.|.-.|..+|+.+.++.... ..+. .+++ .+..++.++.|+.|.-.|.++|+.+-+..
T Consensus 70 g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av--~~~~v~v~t~dg~l~ALDa~TGk~~W~~~ 147 (527)
T TIGR03075 70 GVMYVTTSYSRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVAL--YDGKVFFGTLDARLVALDAKTGKVVWSKK 147 (527)
T ss_pred CEEEEECCCCcEEEEECCCCceeeEecCCCCcccccccccccccccceE--ECCEEEEEcCCCEEEEEECCCCCEEeecc
Confidence 367777778899999999999887765311 1111 1122 23467788889999999999999876654
Q ss_pred ecCCC---CceE-EEEECCCCeEEEEEec--CCCCceEEEEeCCCCCCceeEeeec------------------------
Q psy14130 259 CHPGT---RSSK-AVFIGDTGRIVTTGFS--RHSDRQVGLWDENDLNTPLALETVD------------------------ 308 (494)
Q Consensus 259 ~~~~~---~~~~-~~~~~~~~~l~~~g~~--~~~d~~i~iwd~~~~~~~~~~~~~~------------------------ 308 (494)
..... .+.. -... + +.+++...+ ...++.|.-+|.++++..-......
T Consensus 148 ~~~~~~~~~~tssP~v~-~-g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~p~~~~~~~~~~~~~~~~~~~~tw~~ 225 (527)
T TIGR03075 148 NGDYKAGYTITAAPLVV-K-GKVITGISGGEFGVRGYVTAYDAKTGKLVWRRYTVPGDMGYLDKADKPVGGEPGAKTWPG 225 (527)
T ss_pred cccccccccccCCcEEE-C-CEEEEeecccccCCCcEEEEEECCCCceeEeccCcCCCcccccccccccccccccCCCCC
Confidence 22110 0111 1111 2 445443300 0126788888887765432222111
Q ss_pred ------CCCceEEeEEeCCCCEEEEEEeC----CC-----------cEEEEEeeCCCceEEecc
Q psy14130 309 ------SSSGVLFPYYDHDTRILFLAGKG----DG-----------NIRYYELTNERPYIHFLN 351 (494)
Q Consensus 309 ------~~~~v~~~~~~~~~~~l~~~g~~----dg-----------~i~~wd~~~~~~~~~~~~ 351 (494)
....-..+.++|....+|+-.+. ++ .|.-.|+++|+...++..
T Consensus 226 ~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~TG~~~W~~Q~ 289 (527)
T TIGR03075 226 DAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPDTGKIKWHYQT 289 (527)
T ss_pred CccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEccccCCEEEeeeC
Confidence 11112346888888887665433 22 677889999987666543
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens. |
| >PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins | Back alignment and domain information |
|---|
Probab=94.17 E-value=0.28 Score=30.20 Aligned_cols=32 Identities=19% Similarity=0.405 Sum_probs=26.9
Q ss_pred CceEEEEEcCCC---CEEEEEeCCCeEEEEeCCCC
Q psy14130 220 DVINCLSFNRDG---SRLVTTCKDKTVRVLDPRTG 251 (494)
Q Consensus 220 ~~v~~l~~~~~~---~~l~s~~~d~~v~iwd~~~~ 251 (494)
+.|.++.|+|+. .+|+.+-.-+.|.|+|++++
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~~ 35 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRSN 35 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEcccC
Confidence 468899999844 58888888999999999963
|
It contains a characteristic DLL sequence motif. |
| >PF15390 DUF4613: Domain of unknown function (DUF4613) | Back alignment and domain information |
|---|
Probab=94.10 E-value=5 Score=40.15 Aligned_cols=119 Identities=13% Similarity=0.177 Sum_probs=75.8
Q ss_pred ccccEEEEEEcCCCC---CEEEEEeCCCeEEEEECCC-----CeEEEEecC-C----CCceEEEEEcCCCCEEEEEeCCC
Q psy14130 175 HKRRVGYIEWHPTAE---NVVASAGFDYLIILWDVGK-----GEALTVIDC-H----PDVINCLSFNRDGSRLVTTCKDK 241 (494)
Q Consensus 175 h~~~V~~~~~~p~~~---~~l~s~s~d~~v~iwd~~~-----~~~~~~~~~-h----~~~v~~l~~~~~~~~l~s~~~d~ 241 (494)
.-.-|..+.|.|-+. -.|.+......|.+|-+.. ++.+..-.. . .---.++.|+|....|+.-....
T Consensus 55 qFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~d 134 (671)
T PF15390_consen 55 QFEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARD 134 (671)
T ss_pred ccceeeeeeecCcccCCCCceEEEeccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCc
Confidence 445589999998631 1344455678999999852 222221111 1 11235688999999888877776
Q ss_pred eEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCC
Q psy14130 242 TVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEN 296 (494)
Q Consensus 242 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~ 296 (494)
.-.+++++.....-+..-.....+.+.+|..||.+++++- ++.=.-++||-.
T Consensus 135 vSV~~sV~~d~srVkaDi~~~G~IhCACWT~DG~RLVVAv---GSsLHSyiWd~~ 186 (671)
T PF15390_consen 135 VSVLPSVHCDSSRVKADIKTSGLIHCACWTKDGQRLVVAV---GSSLHSYIWDSA 186 (671)
T ss_pred eeEeeeeeeCCceEEEeccCCceEEEEEecCcCCEEEEEe---CCeEEEEEecCc
Confidence 6677777755533333223334489999999988887765 455566789843
|
|
| >KOG4499|consensus | Back alignment and domain information |
|---|
Probab=93.89 E-value=4.1 Score=35.68 Aligned_cols=169 Identities=15% Similarity=0.102 Sum_probs=94.4
Q ss_pred EEEEEeCCCeEEEEECCC--CeEEEEe---c--CCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCC
Q psy14130 191 VVASAGFDYLIILWDVGK--GEALTVI---D--CHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGT 263 (494)
Q Consensus 191 ~l~s~s~d~~v~iwd~~~--~~~~~~~---~--~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~ 263 (494)
+.+.++..-.|.-||... .....++ + ....+.+.-..+|+|++++-.-.|-.- .+....+.+..-+.+|.-.
T Consensus 73 ~~v~~G~kf~i~nwd~~~~~a~v~~t~~ev~~d~kknR~NDgkvdP~Gryy~GtMad~~~-~le~~~g~Ly~~~~~h~v~ 151 (310)
T KOG4499|consen 73 FAVGCGSKFVIVNWDGVSESAKVYRTLFEVQPDRKKNRLNDGKVDPDGRYYGGTMADFGD-DLEPIGGELYSWLAGHQVE 151 (310)
T ss_pred EEEeecceEEEEEcccccceeeeeeeccccCchHHhcccccCccCCCCceeeeeeccccc-cccccccEEEEeccCCCce
Confidence 455555555666788432 2233332 1 123456667789999985543333211 3333333333333333321
Q ss_pred -------CceEEEEECCCCeEEEEEecCCCCceEEEEe--CCCCCC--ceeEeeecC-----CCceEEeEEeCCCCEEEE
Q psy14130 264 -------RSSKAVFIGDTGRIVTTGFSRHSDRQVGLWD--ENDLNT--PLALETVDS-----SSGVLFPYYDHDTRILFL 327 (494)
Q Consensus 264 -------~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd--~~~~~~--~~~~~~~~~-----~~~v~~~~~~~~~~~l~~ 327 (494)
..+.+.|..+...+.... +.+-+|.-|| ..++.. +..+..+.. +...-.++.+.+|... +
T Consensus 152 ~i~~~v~IsNgl~Wd~d~K~fY~iD---sln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~-V 227 (310)
T KOG4499|consen 152 LIWNCVGISNGLAWDSDAKKFYYID---SLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLY-V 227 (310)
T ss_pred eeehhccCCccccccccCcEEEEEc---cCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEE-E
Confidence 145677887767777777 7788887787 333221 111111111 1112234456666665 7
Q ss_pred EEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecC
Q psy14130 328 AGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPK 367 (494)
Q Consensus 328 ~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 367 (494)
+.-..++|.-.|..+|+.+..+.-. ...+++.||--+
T Consensus 228 a~~ng~~V~~~dp~tGK~L~eiklP---t~qitsccFgGk 264 (310)
T KOG4499|consen 228 ATFNGGTVQKVDPTTGKILLEIKLP---TPQITSCCFGGK 264 (310)
T ss_pred EEecCcEEEEECCCCCcEEEEEEcC---CCceEEEEecCC
Confidence 7778899999999999987665322 467999999755
|
|
| >PRK13684 Ycf48-like protein; Provisional | Back alignment and domain information |
|---|
Probab=93.80 E-value=6.4 Score=37.54 Aligned_cols=152 Identities=15% Similarity=0.137 Sum_probs=82.1
Q ss_pred cccEEEEEEcCCCCCEEEEEeCCCeEEE-EECCCCeEEEEe-cCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce
Q psy14130 176 KRRVGYIEWHPTAENVVASAGFDYLIIL-WDVGKGEALTVI-DCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLV 253 (494)
Q Consensus 176 ~~~V~~~~~~p~~~~~l~s~s~d~~v~i-wd~~~~~~~~~~-~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~ 253 (494)
...+.++.+.|++ .+++.+ ..|.+.. +|- .++.-..+ ..-...++++.+.++++.++.+ ..|.+++=....|..
T Consensus 172 ~g~~~~i~~~~~g-~~v~~g-~~G~i~~s~~~-gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg-~~G~~~~~s~d~G~s 247 (334)
T PRK13684 172 AGVVRNLRRSPDG-KYVAVS-SRGNFYSTWEP-GQTAWTPHQRNSSRRLQSMGFQPDGNLWMLA-RGGQIRFNDPDDLES 247 (334)
T ss_pred cceEEEEEECCCC-eEEEEe-CCceEEEEcCC-CCCeEEEeeCCCcccceeeeEcCCCCEEEEe-cCCEEEEccCCCCCc
Confidence 4568899999986 455554 4565543 222 22222222 2345678999999999877665 457665333444442
Q ss_pred EEEeeec---CCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEee-ecCCCceEEeEEeCCCCEEEEEE
Q psy14130 254 ISQGVCH---PGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALET-VDSSSGVLFPYYDHDTRILFLAG 329 (494)
Q Consensus 254 ~~~~~~~---~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~g 329 (494)
-.....+ ....+..+.+.++ +.++++| .+|.+.. ....+..-..... .........+.|..+++.+ ++|
T Consensus 248 W~~~~~~~~~~~~~l~~v~~~~~-~~~~~~G----~~G~v~~-S~d~G~tW~~~~~~~~~~~~~~~~~~~~~~~~~-~~G 320 (334)
T PRK13684 248 WSKPIIPEITNGYGYLDLAYRTP-GEIWAGG----GNGTLLV-SKDGGKTWEKDPVGEEVPSNFYKIVFLDPEKGF-VLG 320 (334)
T ss_pred cccccCCccccccceeeEEEcCC-CCEEEEc----CCCeEEE-eCCCCCCCeECCcCCCCCcceEEEEEeCCCceE-EEC
Confidence 2222111 1122566777776 6788887 5775553 3332222111110 0112356667777666655 555
Q ss_pred eCCCcEEEEE
Q psy14130 330 KGDGNIRYYE 339 (494)
Q Consensus 330 ~~dg~i~~wd 339 (494)
..|.|.-|+
T Consensus 321 -~~G~il~~~ 329 (334)
T PRK13684 321 -QRGVLLRYV 329 (334)
T ss_pred -CCceEEEec
Confidence 678877665
|
|
| >PHA02790 Kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=93.57 E-value=6.8 Score=39.52 Aligned_cols=145 Identities=11% Similarity=-0.028 Sum_probs=69.3
Q ss_pred CEEEEEeCCC-----eEEEEECCCCeEEE--EecCCCCceEEEEEcCCCCEEEEEeCC--CeEEEEeCCCCceEEEeeec
Q psy14130 190 NVVASAGFDY-----LIILWDVGKGEALT--VIDCHPDVINCLSFNRDGSRLVTTCKD--KTVRVLDPRTGLVISQGVCH 260 (494)
Q Consensus 190 ~~l~s~s~d~-----~v~iwd~~~~~~~~--~~~~h~~~v~~l~~~~~~~~l~s~~~d--~~v~iwd~~~~~~~~~~~~~ 260 (494)
.+++.|+.++ ++..||..+++-.. .+.........+. -+|...+.|+.+ ..+..||+.+++-...-...
T Consensus 273 ~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~~~~v~--~~~~iYviGG~~~~~sve~ydp~~n~W~~~~~l~ 350 (480)
T PHA02790 273 VVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLYASGVP--ANNKLYVVGGLPNPTSVERWFHGDAAWVNMPSLL 350 (480)
T ss_pred EEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCchhhcceEEE--ECCEEEEECCcCCCCceEEEECCCCeEEECCCCC
Confidence 5677777543 57778887765322 2221111112222 357777777753 45888998766532211111
Q ss_pred CCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEe
Q psy14130 261 PGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYEL 340 (494)
Q Consensus 261 ~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~ 340 (494)
....-..++. - ++++++.|........+..||.++..-.. .........-.+ +..-+ ..||+.| |.+.+||.
T Consensus 351 ~~r~~~~~~~-~-~g~IYviGG~~~~~~~ve~ydp~~~~W~~-~~~m~~~r~~~~-~~~~~-~~IYv~G---G~~e~ydp 422 (480)
T PHA02790 351 KPRCNPAVAS-I-NNVIYVIGGHSETDTTTEYLLPNHDQWQF-GPSTYYPHYKSC-ALVFG-RRLFLVG---RNAEFYCE 422 (480)
T ss_pred CCCcccEEEE-E-CCEEEEecCcCCCCccEEEEeCCCCEEEe-CCCCCCccccce-EEEEC-CEEEEEC---CceEEecC
Confidence 1110112222 2 36787776211122457788876532211 100111100111 11223 4566877 45778998
Q ss_pred eCCC
Q psy14130 341 TNER 344 (494)
Q Consensus 341 ~~~~ 344 (494)
.+++
T Consensus 423 ~~~~ 426 (480)
T PHA02790 423 SSNT 426 (480)
T ss_pred CCCc
Confidence 7765
|
|
| >KOG1897|consensus | Back alignment and domain information |
|---|
Probab=93.39 E-value=13 Score=39.71 Aligned_cols=205 Identities=15% Similarity=0.119 Sum_probs=108.7
Q ss_pred eEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeec-CCCCceEEEEECC--CC-
Q psy14130 200 LIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCH-PGTRSSKAVFIGD--TG- 275 (494)
Q Consensus 200 ~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~- 275 (494)
.||+.+-. ..+..+. ..+.++..+.+.+...++.++.++.+...++..+. ++....+ ....+.++.++|- +.
T Consensus 471 ~iRl~ss~--~~~~~W~-~p~~~ti~~~~~n~sqVvvA~~~~~l~y~~i~~~~-l~e~~~~~~e~evaCLDisp~~d~~~ 546 (1096)
T KOG1897|consen 471 SIRLVSSA--GLRSEWR-PPGKITIGVVSANASQVVVAGGGLALFYLEIEDGG-LREVSHKEFEYEVACLDISPLGDAPN 546 (1096)
T ss_pred cEEEEcch--hhhhccc-CCCceEEEEEeecceEEEEecCccEEEEEEeeccc-eeeeeeheecceeEEEecccCCCCCC
Confidence 46666643 2233333 23344444444456678888888888777777666 2222222 2222666666653 33
Q ss_pred --eEEEEEecCCCCceEEEEeCCCCCCceeEeeecCC---CceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEec
Q psy14130 276 --RIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSS---SGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFL 350 (494)
Q Consensus 276 --~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~ 350 (494)
+++++| ..+..+.+--.-.............. ..+....+-.|..+| .++.+||.+..|-+........-.
T Consensus 547 ~s~~~aVG---~Ws~~~~~l~~~pd~~~~~~~~l~~~~iPRSIl~~~~e~d~~yL-lvalgdG~l~~fv~d~~tg~lsd~ 622 (1096)
T KOG1897|consen 547 KSRLLAVG---LWSDISMILTFLPDLILITHEQLSGEIIPRSILLTTFEGDIHYL-LVALGDGALLYFVLDINTGQLSDR 622 (1096)
T ss_pred cceEEEEE---eecceEEEEEECCCcceeeeeccCCCccchheeeEEeeccceEE-EEEcCCceEEEEEEEcccceEccc
Confidence 489999 45555544322211111111212222 344555565666777 888899999887776554322222
Q ss_pred c-cccCCCCeeEEEEecCCc--eeeeccceeEEEEeeCCCCeEEEeEEEeeCCCCCCCCCCCCCCC
Q psy14130 351 N-QSLSGAPQRGLGFMPKRG--CDVTQCEIFRFFKLHTTRNMCEPISMIVPRKSDQFQDDLYPDTA 413 (494)
Q Consensus 351 ~-~~~~~~~v~~~~~~p~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~pr~~~~~~~~~~~~~~ 413 (494)
. .+....|+.--.|+-++. .++.+|.-.-+|--+. +-...|+++..--....|.++.||+..
T Consensus 623 Kk~~lGt~P~~Lr~f~sk~~t~vfa~sdrP~viY~~n~-kLv~spls~kev~~~c~f~s~a~~d~l 687 (1096)
T KOG1897|consen 623 KKVTLGTQPISLRTFSSKSRTAVFALSDRPTVIYSSNG-KLVYSPLSLKEVNHMCPFNSDAYPDSL 687 (1096)
T ss_pred cccccCCCCcEEEEEeeCCceEEEEeCCCCEEEEecCC-cEEEeccchHHhhhhcccccccCCceE
Confidence 1 223345666666765543 5555666666665444 444566654332234456666666643
|
|
| >PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A | Back alignment and domain information |
|---|
Probab=93.26 E-value=7.1 Score=36.40 Aligned_cols=155 Identities=14% Similarity=0.136 Sum_probs=79.2
Q ss_pred cCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeC
Q psy14130 216 DCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDE 295 (494)
Q Consensus 216 ~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~ 295 (494)
..-.+.+..+.-++||+++++++.-..+.-||.-... -.........++..+.|.++ +.+..++ ..+.|++=+.
T Consensus 141 ~~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~-w~~~~r~~~~riq~~gf~~~-~~lw~~~----~Gg~~~~s~~ 214 (302)
T PF14870_consen 141 SETSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTT-WQPHNRNSSRRIQSMGFSPD-GNLWMLA----RGGQIQFSDD 214 (302)
T ss_dssp -S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS--EEEE--SSS-EEEEEE-TT-S-EEEEE----TTTEEEEEE-
T ss_pred cCCcceeEeEEECCCCcEEEEECcccEEEEecCCCcc-ceEEccCccceehhceecCC-CCEEEEe----CCcEEEEccC
Confidence 4455778999999999999998887778889875433 12222223445899999998 6666666 7888888772
Q ss_pred CCCCCceeE--eee-cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCc-ee
Q psy14130 296 NDLNTPLAL--ETV-DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRG-CD 371 (494)
Q Consensus 296 ~~~~~~~~~--~~~-~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~-~~ 371 (494)
......... ... .....+..++|.++++.. ++| +.|.+ +.....|+...+.........-...+.|.++.. ++
T Consensus 215 ~~~~~~w~~~~~~~~~~~~~~ld~a~~~~~~~w-a~g-g~G~l-~~S~DgGktW~~~~~~~~~~~n~~~i~f~~~~~gf~ 291 (302)
T PF14870_consen 215 PDDGETWSEPIIPIKTNGYGILDLAYRPPNEIW-AVG-GSGTL-LVSTDGGKTWQKDRVGENVPSNLYRIVFVNPDKGFV 291 (302)
T ss_dssp TTEEEEE---B-TTSS--S-EEEEEESSSS-EE-EEE-STT-E-EEESSTTSS-EE-GGGTTSSS---EEEEEETTEEEE
T ss_pred CCCccccccccCCcccCceeeEEEEecCCCCEE-EEe-CCccE-EEeCCCCccceECccccCCCCceEEEEEcCCCceEE
Confidence 211110000 111 133458899999887666 655 45543 455666766544433223344577888866544 44
Q ss_pred eeccceeE
Q psy14130 372 VTQCEIFR 379 (494)
Q Consensus 372 ~~~~~~~~ 379 (494)
+..++.+-
T Consensus 292 lG~~G~ll 299 (302)
T PF14870_consen 292 LGQDGVLL 299 (302)
T ss_dssp E-STTEEE
T ss_pred ECCCcEEE
Confidence 44566543
|
|
| >PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins | Back alignment and domain information |
|---|
Probab=93.16 E-value=0.54 Score=28.96 Aligned_cols=32 Identities=16% Similarity=0.177 Sum_probs=26.9
Q ss_pred ccEEEEEEcCCCC--CEEEEEeCCCeEEEEECCC
Q psy14130 177 RRVGYIEWHPTAE--NVVASAGFDYLIILWDVGK 208 (494)
Q Consensus 177 ~~V~~~~~~p~~~--~~l~s~s~d~~v~iwd~~~ 208 (494)
+.|.++.|+|... .+|+.+-.-+.|.|+|+++
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 3689999998653 5888888889999999985
|
It contains a characteristic DLL sequence motif. |
| >PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus | Back alignment and domain information |
|---|
Probab=92.97 E-value=1.5 Score=42.72 Aligned_cols=49 Identities=12% Similarity=0.053 Sum_probs=41.2
Q ss_pred ecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCC
Q psy14130 215 IDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGT 263 (494)
Q Consensus 215 ~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~ 263 (494)
+......+.+++.+|++++.++...=|+|.++|+.++..++.+++-.+.
T Consensus 303 l~D~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdA 351 (415)
T PF14655_consen 303 LPDSKREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDA 351 (415)
T ss_pred eccCCceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccc
Confidence 3334556889999999999999888899999999999988888877665
|
|
| >COG5276 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=92.82 E-value=7.4 Score=35.44 Aligned_cols=156 Identities=12% Similarity=0.054 Sum_probs=99.9
Q ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEe-eecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCC
Q psy14130 218 HPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQG-VCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEN 296 (494)
Q Consensus 218 h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~ 296 (494)
-.+.+..+.++ +++...+..+.-++|.|+.+...-... .-.... ...... -.++...++. .+.-+.+.|+.
T Consensus 85 ~~~l~~Dv~vs--e~yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~g-yaygv~-vsGn~aYVad----lddgfLivdvs 156 (370)
T COG5276 85 ARDLFADVRVS--EEYVYVADWSSGLRIVDISTPDSPTLIGFLNTDG-YAYGVY-VSGNYAYVAD----LDDGFLIVDVS 156 (370)
T ss_pred hhhhhheeEec--ccEEEEEcCCCceEEEeccCCCCcceeccccCCc-eEEEEE-ecCCEEEEee----ccCcEEEEECC
Confidence 44566777786 557777888888999999887622221 111212 223322 2334555555 56668889999
Q ss_pred CCCCceeEeeecCCCc-eEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeecc
Q psy14130 297 DLNTPLALETVDSSSG-VLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQC 375 (494)
Q Consensus 297 ~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~ 375 (494)
+...|........... ...++.| |++-|++ ..|+-+.+-|+.+... ..++.....+..+.++..++++.+++..+
T Consensus 157 dpssP~lagrya~~~~d~~~v~IS--Gn~AYvA-~~d~GL~ivDVSnp~s-Pvli~~~n~g~g~~sv~vsdnr~y~vvy~ 232 (370)
T COG5276 157 DPSSPQLAGRYALPGGDTHDVAIS--GNYAYVA-WRDGGLTIVDVSNPHS-PVLIGSYNTGPGTYSVSVSDNRAYLVVYD 232 (370)
T ss_pred CCCCceeeeeeccCCCCceeEEEe--cCeEEEE-EeCCCeEEEEccCCCC-CeEEEEEecCCceEEEEecCCeeEEEEcc
Confidence 8887776555433322 2445554 4555343 4788899999988754 34455555455789999999999988877
Q ss_pred ceeEEEEeeC
Q psy14130 376 EIFRFFKLHT 385 (494)
Q Consensus 376 ~~~~~~~l~~ 385 (494)
+-+-+-+...
T Consensus 233 egvlivd~s~ 242 (370)
T COG5276 233 EGVLIVDVSG 242 (370)
T ss_pred cceEEEecCC
Confidence 7776666555
|
|
| >PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus | Back alignment and domain information |
|---|
Probab=92.59 E-value=2.1 Score=41.66 Aligned_cols=92 Identities=16% Similarity=0.158 Sum_probs=64.2
Q ss_pred EecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEE-EEE-cCCC---------------C
Q psy14130 170 MDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINC-LSF-NRDG---------------S 232 (494)
Q Consensus 170 ~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~-l~~-~~~~---------------~ 232 (494)
..+......+.++..+|.+ ++.|+...=|.|.++|+.++..++.++|..+.=.. +.. .... .
T Consensus 301 ~~l~D~~R~~~~i~~sP~~-~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~ 379 (415)
T PF14655_consen 301 FGLPDSKREGESICLSPSG-RLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFA 379 (415)
T ss_pred EeeccCCceEEEEEECCCC-CEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcce
Confidence 3455667789999999997 68888777799999999999888888876543111 111 0111 1
Q ss_pred --EEEEEeCCCeEEEEeCCCCceEEEeeecCC
Q psy14130 233 --RLVTTCKDKTVRVLDPRTGLVISQGVCHPG 262 (494)
Q Consensus 233 --~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~ 262 (494)
+++-+-.-|.|.||.+++|..+..+....+
T Consensus 380 l~LvIyaprRg~lEvW~~~~g~Rv~a~~v~k~ 411 (415)
T PF14655_consen 380 LFLVIYAPRRGILEVWSMRQGPRVAAFNVGKG 411 (415)
T ss_pred EEEEEEeccCCeEEEEecCCCCEEEEEEeCCC
Confidence 233456788999999999988877765433
|
|
| >TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family | Back alignment and domain information |
|---|
Probab=92.39 E-value=14 Score=37.68 Aligned_cols=154 Identities=15% Similarity=0.161 Sum_probs=85.8
Q ss_pred EEEEEeCCCeEEEEECCCCeEEEEecCCCCc-eEEEEEcC---CCCEEEEEe------CCCeEEEEeCCCCceEEEeeec
Q psy14130 191 VVASAGFDYLIILWDVGKGEALTVIDCHPDV-INCLSFNR---DGSRLVTTC------KDKTVRVLDPRTGLVISQGVCH 260 (494)
Q Consensus 191 ~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~-v~~l~~~~---~~~~l~s~~------~d~~v~iwd~~~~~~~~~~~~~ 260 (494)
.++.++.|+.+.-.|..+|+.+......... -..+.-+| ++ .++.++ .+|.|..+|.++|+.+-++..-
T Consensus 122 ~v~v~t~dg~l~ALDa~TGk~~W~~~~~~~~~~~~~tssP~v~~g-~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~ 200 (527)
T TIGR03075 122 KVFFGTLDARLVALDAKTGKVVWSKKNGDYKAGYTITAAPLVVKG-KVITGISGGEFGVRGYVTAYDAKTGKLVWRRYTV 200 (527)
T ss_pred EEEEEcCCCEEEEEECCCCCEEeecccccccccccccCCcEEECC-EEEEeecccccCCCcEEEEEECCCCceeEeccCc
Confidence 5667788999999999999988765421100 01111122 34 444443 2689999999999976554321
Q ss_pred CC------------------------------CC-ceEEEEECCCCeEEEEEecC------C---CC----ceEEEEeCC
Q psy14130 261 PG------------------------------TR-SSKAVFIGDTGRIVTTGFSR------H---SD----RQVGLWDEN 296 (494)
Q Consensus 261 ~~------------------------------~~-~~~~~~~~~~~~l~~~g~~~------~---~d----~~i~iwd~~ 296 (494)
.. .. -..+.+.+..+ ++..+.+. . .| ..|.-.|++
T Consensus 201 p~~~~~~~~~~~~~~~~~~~~tw~~~~~~~gg~~~W~~~s~D~~~~-lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~ 279 (527)
T TIGR03075 201 PGDMGYLDKADKPVGGEPGAKTWPGDAWKTGGGATWGTGSYDPETN-LIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPD 279 (527)
T ss_pred CCCcccccccccccccccccCCCCCCccccCCCCccCceeEcCCCC-eEEEeCCCCCCCCCCCCCCCCccceeEEEEccc
Confidence 11 00 11223444423 33333100 0 01 145555777
Q ss_pred CCCCceeEeeecC-------CCceEEeEEeCCCC--EEEEEEeCCCcEEEEEeeCCCce
Q psy14130 297 DLNTPLALETVDS-------SSGVLFPYYDHDTR--ILFLAGKGDGNIRYYELTNERPY 346 (494)
Q Consensus 297 ~~~~~~~~~~~~~-------~~~v~~~~~~~~~~--~l~~~g~~dg~i~~wd~~~~~~~ 346 (494)
+++..-.++...| .....-+....+|+ .+++.+..+|.+++.|-++++++
T Consensus 280 TG~~~W~~Q~~~~D~wD~d~~~~p~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i 338 (527)
T TIGR03075 280 TGKIKWHYQTTPHDEWDYDGVNEMILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLL 338 (527)
T ss_pred cCCEEEeeeCCCCCCccccCCCCcEEEEeccCCcEEEEEEEeCCCceEEEEECCCCcee
Confidence 6665444443222 12222233335776 45588999999999999999874
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens. |
| >COG5276 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=92.30 E-value=8.7 Score=35.00 Aligned_cols=193 Identities=9% Similarity=0.086 Sum_probs=115.8
Q ss_pred ccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecC--CCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc--
Q psy14130 177 RRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDC--HPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGL-- 252 (494)
Q Consensus 177 ~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~--h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~-- 252 (494)
+-+..+.++.+ +...+..+.-++|.|+.+...-..+.. -.+.-+++.. .|++...+..|.-+.+.|+.+.+
T Consensus 87 ~l~~Dv~vse~---yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gyaygv~v--sGn~aYVadlddgfLivdvsdpssP 161 (370)
T COG5276 87 DLFADVRVSEE---YVYVADWSSGLRIVDISTPDSPTLIGFLNTDGYAYGVYV--SGNYAYVADLDDGFLIVDVSDPSSP 161 (370)
T ss_pred hhhheeEeccc---EEEEEcCCCceEEEeccCCCCcceeccccCCceEEEEEe--cCCEEEEeeccCcEEEEECCCCCCc
Confidence 44567777754 566666777899999987653322211 2233444444 58899998877778889987665
Q ss_pred -eEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeC
Q psy14130 253 -VISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKG 331 (494)
Q Consensus 253 -~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~ 331 (494)
+.......... ...++.+.+ +-+.+. .|+-+.+-|+.+...|......+...++.++..+++.-++ +. .
T Consensus 162 ~lagrya~~~~d-~~~v~ISGn--~AYvA~----~d~GL~ivDVSnp~sPvli~~~n~g~g~~sv~vsdnr~y~-vv--y 231 (370)
T COG5276 162 QLAGRYALPGGD-THDVAISGN--YAYVAW----RDGGLTIVDVSNPHSPVLIGSYNTGPGTYSVSVSDNRAYL-VV--Y 231 (370)
T ss_pred eeeeeeccCCCC-ceeEEEecC--eEEEEE----eCCCeEEEEccCCCCCeEEEEEecCCceEEEEecCCeeEE-EE--c
Confidence 23333333332 345555543 444444 6888999999999999888777776688888777776555 33 3
Q ss_pred CCcEEEEEeeCCCceEEecccccCCCC--eeEEEEecCCceeeeccceeEEEEeeC
Q psy14130 332 DGNIRYYELTNERPYIHFLNQSLSGAP--QRGLGFMPKRGCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 332 dg~i~~wd~~~~~~~~~~~~~~~~~~~--v~~~~~~p~~~~~~~~~~~~~~~~l~~ 385 (494)
+--+.+-|..+.+.. ..+..+....+ +..+..+.+..+++-++.-+-+-++..
T Consensus 232 ~egvlivd~s~~ssp-~~~gsyet~~p~~~s~v~Vs~~~~Yvadga~gl~~idisn 286 (370)
T COG5276 232 DEGVLIVDVSGPSSP-TVFGSYETSNPVSISTVPVSGEYAYVADGAKGLPIIDISN 286 (370)
T ss_pred ccceEEEecCCCCCc-eEeeccccCCcccccceecccceeeeeccccCceeEeccC
Confidence 444667777766532 22233332322 333455545445555555555554443
|
|
| >TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein | Back alignment and domain information |
|---|
Probab=92.25 E-value=10 Score=35.86 Aligned_cols=104 Identities=9% Similarity=0.044 Sum_probs=49.7
Q ss_pred CEEEEEeCC-----CeEEEEECCCCeE---EEEecCCCCce--EEEEEcCCCCEEEEEeC-----CCeEEEEeCCCCceE
Q psy14130 190 NVVASAGFD-----YLIILWDVGKGEA---LTVIDCHPDVI--NCLSFNRDGSRLVTTCK-----DKTVRVLDPRTGLVI 254 (494)
Q Consensus 190 ~~l~s~s~d-----~~v~iwd~~~~~~---~~~~~~h~~~v--~~l~~~~~~~~l~s~~~-----d~~v~iwd~~~~~~~ 254 (494)
.+++.|+.+ ..+..+|+.+.+. ...+..-..+. .+++. -++++.+.|+. ...+..||+.+.+-.
T Consensus 74 ~lyviGG~~~~~~~~~v~~~d~~~~~w~~~~~~~~~lp~~~~~~~~~~-~~~~iYv~GG~~~~~~~~~v~~yd~~~~~W~ 152 (323)
T TIGR03548 74 GIYYIGGSNSSERFSSVYRITLDESKEELICETIGNLPFTFENGSACY-KDGTLYVGGGNRNGKPSNKSYLFNLETQEWF 152 (323)
T ss_pred EEEEEcCCCCCCCceeEEEEEEcCCceeeeeeEcCCCCcCccCceEEE-ECCEEEEEeCcCCCccCceEEEEcCCCCCee
Confidence 566777654 3566677766542 12222111111 12222 24666666664 246888999876632
Q ss_pred EEeeecCCCCceEEEEECCCCeEEEEEecCCCCc----eEEEEeCCCC
Q psy14130 255 SQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDR----QVGLWDENDL 298 (494)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~----~i~iwd~~~~ 298 (494)
..-......+....+..-+ ++|++.| +.++ .+.+||+.+.
T Consensus 153 ~~~~~p~~~r~~~~~~~~~-~~iYv~G---G~~~~~~~~~~~yd~~~~ 196 (323)
T TIGR03548 153 ELPDFPGEPRVQPVCVKLQ-NELYVFG---GGSNIAYTDGYKYSPKKN 196 (323)
T ss_pred ECCCCCCCCCCcceEEEEC-CEEEEEc---CCCCccccceEEEecCCC
Confidence 2111111111222222233 5677666 3332 3568888764
|
Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat. |
| >PF14761 HPS3_N: Hermansky-Pudlak syndrome 3 | Back alignment and domain information |
|---|
Probab=92.08 E-value=7.5 Score=33.80 Aligned_cols=100 Identities=14% Similarity=0.124 Sum_probs=64.7
Q ss_pred EEEEEeCCCeEEEEECC--CCeEEEEecCCCCceEEEEEcCCCCEEEEEeCC---C---eEEEE---eCC--CCceEE-E
Q psy14130 191 VVASAGFDYLIILWDVG--KGEALTVIDCHPDVINCLSFNRDGSRLVTTCKD---K---TVRVL---DPR--TGLVIS-Q 256 (494)
Q Consensus 191 ~l~s~s~d~~v~iwd~~--~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d---~---~v~iw---d~~--~~~~~~-~ 256 (494)
.|+.+.....|.+|++. ..+.+.+|. --+.|..+.++..|++|+|--.+ . .+|+| +.. ..+++. .
T Consensus 30 ~Lfva~~g~~Vev~~l~~~~~~~~~~F~-Tv~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~~~~~v~vR 108 (215)
T PF14761_consen 30 ALFVAASGCKVEVYDLEQEECPLLCTFS-TVGRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQKEENSPVRVR 108 (215)
T ss_pred eEEEEcCCCEEEEEEcccCCCceeEEEc-chhheeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhcccCCcEEEE
Confidence 34333556789999998 334566676 34889999999999999987532 2 56665 222 111111 1
Q ss_pred eeec--------------------CCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCC
Q psy14130 257 GVCH--------------------PGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEN 296 (494)
Q Consensus 257 ~~~~--------------------~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~ 296 (494)
+.+| ....+.+++..|-.|.|+++. ++.+.+|.+.
T Consensus 109 iaG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~LlVg~-----~~~l~lf~l~ 163 (215)
T PF14761_consen 109 IAGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGNLLVGC-----GNKLVLFTLK 163 (215)
T ss_pred EcccccccCCCCccccceEEEEecCCCCCCEEEecCCCCCEEEEc-----CCEEEEEEEE
Confidence 2221 122367788888888888876 7889999865
|
|
| >PF12768 Rax2: Cortical protein marker for cell polarity | Back alignment and domain information |
|---|
Probab=91.99 E-value=10 Score=35.01 Aligned_cols=97 Identities=15% Similarity=0.147 Sum_probs=61.8
Q ss_pred CeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEe------CCCeEEEEeCCCCceEEEeee-c----CCCCceE
Q psy14130 199 YLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTC------KDKTVRVLDPRTGLVISQGVC-H----PGTRSSK 267 (494)
Q Consensus 199 ~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~------~d~~v~iwd~~~~~~~~~~~~-~----~~~~~~~ 267 (494)
..|++||..+.+-..--.+-.+.|+++.|..+.++++.|. ....+..||..+... ..+.. . .+. +..
T Consensus 16 ~~lC~yd~~~~qW~~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w-~~~~~~~s~~ipgp-v~a 93 (281)
T PF12768_consen 16 PGLCLYDTDNSQWSSPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTW-SSLGGGSSNSIPGP-VTA 93 (281)
T ss_pred CEEEEEECCCCEeecCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCee-eecCCcccccCCCc-EEE
Confidence 4699999987765544455678899999997777777664 356788999887652 22222 1 133 555
Q ss_pred EEEEC-CCCeEEEEEecCCCCceEEEEeCCC
Q psy14130 268 AVFIG-DTGRIVTTGFSRHSDRQVGLWDEND 297 (494)
Q Consensus 268 ~~~~~-~~~~l~~~g~~~~~d~~i~iwd~~~ 297 (494)
+.+.. +...+.++|-....+..|..||=.+
T Consensus 94 ~~~~~~d~~~~~~aG~~~~g~~~l~~~dGs~ 124 (281)
T PF12768_consen 94 LTFISNDGSNFWVAGRSANGSTFLMKYDGSS 124 (281)
T ss_pred EEeeccCCceEEEeceecCCCceEEEEcCCc
Confidence 55543 4446776664333455677887443
|
|
| >PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes | Back alignment and domain information |
|---|
Probab=91.92 E-value=2.3 Score=38.14 Aligned_cols=141 Identities=16% Similarity=0.200 Sum_probs=75.5
Q ss_pred EEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEe----eecCCCceEEeEE
Q psy14130 243 VRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALE----TVDSSSGVLFPYY 318 (494)
Q Consensus 243 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~----~~~~~~~v~~~~~ 318 (494)
-.+||+.+++.. .+......-+..-.+.++ ++++.+|-.......+++++........... .+.....-....-
T Consensus 48 s~~yD~~tn~~r-pl~v~td~FCSgg~~L~d-G~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~~~RWYpT~~~ 125 (243)
T PF07250_consen 48 SVEYDPNTNTFR-PLTVQTDTFCSGGAFLPD-GRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQSGRWYPTATT 125 (243)
T ss_pred EEEEecCCCcEE-eccCCCCCcccCcCCCCC-CCEEEeCCCCccccceEEEecCCCCCCCCceECcccccCCCccccceE
Confidence 458999888743 333333322344456777 5666665222234568888865411111111 1112223334556
Q ss_pred eCCCCEEEEEEeCCCcEEEEEeeCC--Cce-EEeccccc---CCCCeeEEEEecCCceeeeccceeEEEEeeC
Q psy14130 319 DHDTRILFLAGKGDGNIRYYELTNE--RPY-IHFLNQSL---SGAPQRGLGFMPKRGCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 319 ~~~~~~l~~~g~~dg~i~~wd~~~~--~~~-~~~~~~~~---~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~~ 385 (494)
-|||+.|++.|....+..+|.-... ... ..++.... ...----+...|+|.+++.++....+|+...
T Consensus 126 L~DG~vlIvGG~~~~t~E~~P~~~~~~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~~s~i~d~~~ 198 (243)
T PF07250_consen 126 LPDGRVLIVGGSNNPTYEFWPPKGPGPGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANRGSIIYDYKT 198 (243)
T ss_pred CCCCCEEEEeCcCCCcccccCCccCCCCceeeecchhhhccCccccCceEEEcCCCCEEEEEcCCcEEEeCCC
Confidence 6899999555555445666654321 111 11222111 1112234667899999999988889998877
|
Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium []. |
| >PLN00033 photosystem II stability/assembly factor; Provisional | Back alignment and domain information |
|---|
Probab=91.63 E-value=14 Score=36.03 Aligned_cols=148 Identities=13% Similarity=0.166 Sum_probs=79.9
Q ss_pred EEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc-----e
Q psy14130 179 VGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGL-----V 253 (494)
Q Consensus 179 V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~-----~ 253 (494)
...+..++++ .+++.+..-..++-||-....-...-......++++.|.+++..++++ .+|.+ ++....++ .
T Consensus 241 f~~v~~~~dG-~~~~vg~~G~~~~s~d~G~~~W~~~~~~~~~~l~~v~~~~dg~l~l~g-~~G~l-~~S~d~G~~~~~~~ 317 (398)
T PLN00033 241 FSTVNRSPDG-DYVAVSSRGNFYLTWEPGQPYWQPHNRASARRIQNMGWRADGGLWLLT-RGGGL-YVSKGTGLTEEDFD 317 (398)
T ss_pred eeeEEEcCCC-CEEEEECCccEEEecCCCCcceEEecCCCccceeeeeEcCCCCEEEEe-CCceE-EEecCCCCcccccc
Confidence 4456667777 466666544334445532211011112235678999999999887766 45554 33333343 1
Q ss_pred EEEeeec-CCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEee--ecCCCceEEeEEeCCCCEEEEEEe
Q psy14130 254 ISQGVCH-PGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALET--VDSSSGVLFPYYDHDTRILFLAGK 330 (494)
Q Consensus 254 ~~~~~~~-~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~g~ 330 (494)
....... ....+..+.+.++ +.++++| ..|.+....- .++. -.... -........+.|.++++.+ ++|
T Consensus 318 f~~~~~~~~~~~l~~v~~~~d-~~~~a~G----~~G~v~~s~D-~G~t-W~~~~~~~~~~~~ly~v~f~~~~~g~-~~G- 388 (398)
T PLN00033 318 FEEADIKSRGFGILDVGYRSK-KEAWAAG----GSGILLRSTD-GGKS-WKRDKGADNIAANLYSVKFFDDKKGF-VLG- 388 (398)
T ss_pred eeecccCCCCcceEEEEEcCC-CcEEEEE----CCCcEEEeCC-CCcc-eeEccccCCCCcceeEEEEcCCCceE-EEe-
Confidence 2222221 2222667778766 7888888 6777666542 2222 11111 1112456788887776665 665
Q ss_pred CCCcEEEE
Q psy14130 331 GDGNIRYY 338 (494)
Q Consensus 331 ~dg~i~~w 338 (494)
.+|.|.-|
T Consensus 389 ~~G~il~~ 396 (398)
T PLN00033 389 NDGVLLRY 396 (398)
T ss_pred CCcEEEEe
Confidence 77876554
|
|
| >KOG2280|consensus | Back alignment and domain information |
|---|
Probab=91.63 E-value=19 Score=37.38 Aligned_cols=208 Identities=12% Similarity=0.109 Sum_probs=105.0
Q ss_pred cCCcEEEEEEcC-----------cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEEC
Q psy14130 138 AGGGAFLVLPIH-----------RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDV 206 (494)
Q Consensus 138 ~~~g~~~~~~~~-----------~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~ 206 (494)
.-||.++|.-.. .|+|+++... .+..+.-....+-.+.|+.+. -|+.-..||++.++++
T Consensus 42 p~gGpIAV~r~p~~~~~~~~a~~~I~If~~sG~--------lL~~~~w~~~~lI~mgWs~~e--eLI~v~k~g~v~Vy~~ 111 (829)
T KOG2280|consen 42 PFGGPIAVTRSPSKLVPLYSARPYIRIFNISGQ--------LLGRILWKHGELIGMGWSDDE--ELICVQKDGTVHVYGL 111 (829)
T ss_pred ccCCceEEEecccccccccccceeEEEEecccc--------chHHHHhcCCCeeeecccCCc--eEEEEeccceEEEeec
Confidence 456667666554 1788886543 222232233478899999885 5667788999999998
Q ss_pred CCCeEEEE--e--cCCCCceEEEEEcCCCCEEEEEeCCCeEEE-EeCCCCceEEEeee---cCCCCceEEEEECC-CCeE
Q psy14130 207 GKGEALTV--I--DCHPDVINCLSFNRDGSRLVTTCKDKTVRV-LDPRTGLVISQGVC---HPGTRSSKAVFIGD-TGRI 277 (494)
Q Consensus 207 ~~~~~~~~--~--~~h~~~v~~l~~~~~~~~l~s~~~d~~v~i-wd~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~l 277 (494)
. |+.+.. . ......|..+.|..+|-.+++. +|.+.+ -+.... .+.+++. .... ..+....++ ....
T Consensus 112 ~-ge~ie~~svg~e~~~~~I~ec~~f~~GVavlt~--~g~v~~i~~~~~~-~~~~~~diP~~~~~-~~~Wt~~~~~~~~~ 186 (829)
T KOG2280|consen 112 L-GEFIESNSVGFESQMSDIVECRFFHNGVAVLTV--SGQVILINGVEEP-KLRKMPDIPYNELP-KSCWTVFQPHRQST 186 (829)
T ss_pred c-hhhhcccccccccccCceeEEEEecCceEEEec--CCcEEEEcCCCcc-hhhhCCCCCCccCC-CcceeEecCCCcce
Confidence 5 332222 1 2233445555665566444444 344443 333221 2222222 1111 122222222 1111
Q ss_pred EEEEecCCCCce--EEEEeCCCCCCceeEeeec-CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEeccccc
Q psy14130 278 VTTGFSRHSDRQ--VGLWDENDLNTPLALETVD-SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSL 354 (494)
Q Consensus 278 ~~~g~~~~~d~~--i~iwd~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~ 354 (494)
+..+ -+.. ..++-....... ...+. ....+..+..||+.++| +-=..+|.|.+-+....+.+..+-..
T Consensus 187 ~ll~----v~~~v~~~~~q~~~~~~q--~~~~~~~~~~~~ki~VS~n~~~l-aLyt~~G~i~~vs~D~~~~lce~~~~-- 257 (829)
T KOG2280|consen 187 ILLD----VDVAVGLHICQVEESRVQ--LHALSWPNSSVVKISVSPNRRFL-ALYTETGKIWVVSIDLSQILCEFNCT-- 257 (829)
T ss_pred eEEe----echhhhhcccceeccccc--ccccCCCCceEEEEEEcCCcceE-EEEecCCcEEEEecchhhhhhccCCC--
Confidence 1111 0100 112222211111 11111 23567889999999999 55568899999888877665443211
Q ss_pred CCCCeeEEEEecCCc
Q psy14130 355 SGAPQRGLGFMPKRG 369 (494)
Q Consensus 355 ~~~~v~~~~~~p~~~ 369 (494)
...+...++|..+..
T Consensus 258 ~~~~p~qm~Wcgnda 272 (829)
T KOG2280|consen 258 DHDPPKQMAWCGNDA 272 (829)
T ss_pred CCCchHhceeecCCc
Confidence 123344666665443
|
|
| >KOG2377|consensus | Back alignment and domain information |
|---|
Probab=91.58 E-value=5.8 Score=38.32 Aligned_cols=117 Identities=13% Similarity=0.120 Sum_probs=73.8
Q ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEE----EeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEE
Q psy14130 218 HPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVIS----QGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLW 293 (494)
Q Consensus 218 h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iw 293 (494)
..++|.++.|++|.+.||.--.|++|.+++....+... +.+..... +...+|... ..+.... +.-+.+|
T Consensus 65 d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~-IlGF~W~~s-~e~A~i~-----~~G~e~y 137 (657)
T KOG2377|consen 65 DKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNAN-ILGFCWTSS-TEIAFIT-----DQGIEFY 137 (657)
T ss_pred CCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcce-eEEEEEecC-eeEEEEe-----cCCeEEE
Confidence 46799999999999999999999999999975443222 22222222 677888876 4444444 3446666
Q ss_pred eCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEe-CCCcEEEEEeeC
Q psy14130 294 DENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGK-GDGNIRYYELTN 342 (494)
Q Consensus 294 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~-~dg~i~~wd~~~ 342 (494)
-.......+... ..+...|.-..|.++.+.++++.+ ..+++.=+.+++
T Consensus 138 ~v~pekrslRlV-ks~~~nvnWy~yc~et~v~LL~t~~~~n~lnpf~~~~ 186 (657)
T KOG2377|consen 138 QVLPEKRSLRLV-KSHNLNVNWYMYCPETAVILLSTTVLENVLNPFHFRA 186 (657)
T ss_pred EEchhhhhhhhh-hhcccCccEEEEccccceEeeeccccccccccEEEee
Confidence 544322222221 124567888899999988877766 344444444443
|
|
| >PF14761 HPS3_N: Hermansky-Pudlak syndrome 3 | Back alignment and domain information |
|---|
Probab=91.51 E-value=8.8 Score=33.40 Aligned_cols=107 Identities=17% Similarity=0.151 Sum_probs=64.0
Q ss_pred CEEEEEeCCCeEEEEeCCCCc--eEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCc---eEEEE---eCC-CCCCce
Q psy14130 232 SRLVTTCKDKTVRVLDPRTGL--VISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDR---QVGLW---DEN-DLNTPL 302 (494)
Q Consensus 232 ~~l~s~~~d~~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~---~i~iw---d~~-~~~~~~ 302 (494)
..|+.+.....|.+|++.+.. .+.++..- ..+..+.++..|+++++.= .+.... .+|+| +.. ....+.
T Consensus 29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv--~~V~~l~y~~~GDYlvTlE-~k~~~~~~~fvR~Y~NWr~~~~~~~~v 105 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQEECPLLCTFSTV--GRVLQLVYSEAGDYLVTLE-EKNKRSPVDFVRAYFNWRSQKEENSPV 105 (215)
T ss_pred ceEEEEcCCCEEEEEEcccCCCceeEEEcch--hheeEEEeccccceEEEEE-eecCCccceEEEEEEEhhhhcccCCcE
Confidence 345444667789999998433 45555443 3388999999976666653 222233 56665 221 111222
Q ss_pred e---------------------EeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCC
Q psy14130 303 A---------------------LETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNE 343 (494)
Q Consensus 303 ~---------------------~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~ 343 (494)
. ...++....+.+++..|-...| +.| .++.+.+|.+...
T Consensus 106 ~vRiaG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~L-lVg-~~~~l~lf~l~~~ 165 (215)
T PF14761_consen 106 RVRIAGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGNL-LVG-CGNKLVLFTLKYQ 165 (215)
T ss_pred EEEEcccccccCCCCccccceEEEEecCCCCCCEEEecCCCCCE-EEE-cCCEEEEEEEEEE
Confidence 2 2233344567788888876666 444 4678999998754
|
|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
Probab=91.26 E-value=11 Score=39.89 Aligned_cols=82 Identities=20% Similarity=0.179 Sum_probs=54.7
Q ss_pred CceEEEEEcCCCCEEEEEeCCCeEEEEeCCC---------Cce---EEEe-------eecCCCCceEEEEECC---CCeE
Q psy14130 220 DVINCLSFNRDGSRLVTTCKDKTVRVLDPRT---------GLV---ISQG-------VCHPGTRSSKAVFIGD---TGRI 277 (494)
Q Consensus 220 ~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~---------~~~---~~~~-------~~~~~~~~~~~~~~~~---~~~l 277 (494)
-.|..|..+|+|++++..+..|...+.=++. |+. .+++ ..+....+..+.|+|. +..+
T Consensus 85 f~v~~i~~n~~g~~lal~G~~~v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~l 164 (717)
T PF10168_consen 85 FEVHQISLNPTGSLLALVGPRGVVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSHL 164 (717)
T ss_pred eeEEEEEECCCCCEEEEEcCCcEEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCeE
Confidence 4688899999999999988876554443331 111 1111 1233345889999987 3567
Q ss_pred EEEEecCCCCceEEEEeCCCCCCceeEe
Q psy14130 278 VTTGFSRHSDRQVGLWDENDLNTPLALE 305 (494)
Q Consensus 278 ~~~g~~~~~d~~i~iwd~~~~~~~~~~~ 305 (494)
++-. +|+++|+||+.....+..+.
T Consensus 165 ~vLt----sdn~lR~y~~~~~~~p~~v~ 188 (717)
T PF10168_consen 165 VVLT----SDNTLRLYDISDPQHPWQVL 188 (717)
T ss_pred EEEe----cCCEEEEEecCCCCCCeEEE
Confidence 6665 79999999998766665544
|
It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells []. |
| >PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3 | Back alignment and domain information |
|---|
Probab=90.77 E-value=16 Score=35.11 Aligned_cols=154 Identities=14% Similarity=0.097 Sum_probs=84.7
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEE--ECCCCe--EEEEEecCCC-CceEEEEeCCCCCCcee
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVF--IGDTGR--IVTTGFSRHS-DRQVGLWDENDLNTPLA 303 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--l~~~g~~~~~-d~~i~iwd~~~~~~~~~ 303 (494)
|..++++...+++-+.+||+. |+.++.+..-.-. -..+.+ .-.+.. |++++ .+.. ...|++|.+......+.
T Consensus 66 p~kSlIigTdK~~GL~VYdL~-Gk~lq~~~~Gr~N-NVDvrygf~l~g~~vDlavas-~R~~g~n~l~~f~id~~~g~L~ 142 (381)
T PF02333_consen 66 PAKSLIIGTDKKGGLYVYDLD-GKELQSLPVGRPN-NVDVRYGFPLNGKTVDLAVAS-DRSDGRNSLRLFRIDPDTGELT 142 (381)
T ss_dssp GGG-EEEEEETTTEEEEEETT-S-EEEEE-SS-EE-EEEEEEEEEETTEEEEEEEEE-E-CCCT-EEEEEEEETTTTEEE
T ss_pred cccceEEEEeCCCCEEEEcCC-CcEEEeecCCCcc-eeeeecceecCCceEEEEEEe-cCcCCCCeEEEEEecCCCCcce
Confidence 356788899999999999998 6666666422111 122221 112233 33443 1111 25799997753222221
Q ss_pred Eee-----e-cCCCceEEeE--EeC-CCCEEEEEEeCCCcEEEEEeeC---CCceEEecccccCCCCeeEEEEecCCcee
Q psy14130 304 LET-----V-DSSSGVLFPY--YDH-DTRILFLAGKGDGNIRYYELTN---ERPYIHFLNQSLSGAPQRGLGFMPKRGCD 371 (494)
Q Consensus 304 ~~~-----~-~~~~~v~~~~--~~~-~~~~l~~~g~~dg~i~~wd~~~---~~~~~~~~~~~~~~~~v~~~~~~p~~~~~ 371 (494)
... + .....+..++ -++ +|.+.++....+|.+..|.+.. +....+.+..+.....+.+++.......+
T Consensus 143 ~v~~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f~~~sQ~EGCVVDDe~g~L 222 (381)
T PF02333_consen 143 DVTDPAAPIATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREFKVGSQPEGCVVDDETGRL 222 (381)
T ss_dssp E-CBTTC-EE-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEEE-SS-EEEEEEETTTTEE
T ss_pred EcCCCCcccccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEecCCCcceEEEEecccCCE
Confidence 110 0 1112233333 354 4666656677889999999863 33334455566666789999999887877
Q ss_pred eeccceeEEEEeeC
Q psy14130 372 VTQCEIFRFFKLHT 385 (494)
Q Consensus 372 ~~~~~~~~~~~l~~ 385 (494)
-.+.|..-||++..
T Consensus 223 YvgEE~~GIW~y~A 236 (381)
T PF02333_consen 223 YVGEEDVGIWRYDA 236 (381)
T ss_dssp EEEETTTEEEEEES
T ss_pred EEecCccEEEEEec
Confidence 77878888888865
|
1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A. |
| >COG4257 Vgb Streptogramin lyase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=90.45 E-value=13 Score=33.57 Aligned_cols=194 Identities=18% Similarity=0.045 Sum_probs=115.0
Q ss_pred EEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEe-
Q psy14130 179 VGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQG- 257 (494)
Q Consensus 179 V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~- 257 (494)
-..++-.|+| .+-+++...+.|--.|..+|+....--+....-..|...|||..-++-+.. -|.-.|.++.+. .++
T Consensus 64 p~dvapapdG-~VWft~qg~gaiGhLdP~tGev~~ypLg~Ga~Phgiv~gpdg~~Witd~~~-aI~R~dpkt~ev-t~f~ 140 (353)
T COG4257 64 PFDVAPAPDG-AVWFTAQGTGAIGHLDPATGEVETYPLGSGASPHGIVVGPDGSAWITDTGL-AIGRLDPKTLEV-TRFP 140 (353)
T ss_pred ccccccCCCC-ceEEecCccccceecCCCCCceEEEecCCCCCCceEEECCCCCeeEecCcc-eeEEecCcccce-EEee
Confidence 3567888998 688898888899889999998776655666677788999999877765544 566677766652 222
Q ss_pred --eecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcE
Q psy14130 258 --VCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNI 335 (494)
Q Consensus 258 --~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i 335 (494)
..|........+|.+. +.+-.+| ..|.---.|... ..+.+.......+...++..|||+.. .+.-.++.|
T Consensus 141 lp~~~a~~nlet~vfD~~-G~lWFt~----q~G~yGrLdPa~--~~i~vfpaPqG~gpyGi~atpdGsvw-yaslagnai 212 (353)
T COG4257 141 LPLEHADANLETAVFDPW-GNLWFTG----QIGAYGRLDPAR--NVISVFPAPQGGGPYGICATPDGSVW-YASLAGNAI 212 (353)
T ss_pred cccccCCCcccceeeCCC-ccEEEee----ccccceecCccc--CceeeeccCCCCCCcceEECCCCcEE-EEeccccce
Confidence 2333344677788777 6677776 222221112211 11122222233455667788999988 444466677
Q ss_pred EEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccceeEEEEee
Q psy14130 336 RYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLH 384 (494)
Q Consensus 336 ~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~ 384 (494)
-..|..++.........- ....-+.+.-.|.|..-++.-+..++..++
T Consensus 213 aridp~~~~aev~p~P~~-~~~gsRriwsdpig~~wittwg~g~l~rfd 260 (353)
T COG4257 213 ARIDPFAGHAEVVPQPNA-LKAGSRRIWSDPIGRAWITTWGTGSLHRFD 260 (353)
T ss_pred EEcccccCCcceecCCCc-ccccccccccCccCcEEEeccCCceeeEeC
Confidence 777777764321111111 022234455556666555554444444443
|
|
| >PF12768 Rax2: Cortical protein marker for cell polarity | Back alignment and domain information |
|---|
Probab=90.42 E-value=12 Score=34.50 Aligned_cols=95 Identities=14% Similarity=0.211 Sum_probs=59.7
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEe------CCCeEEEEECCCCeEEEEecC-----
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAG------FDYLIILWDVGKGEALTVIDC----- 217 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s------~d~~v~iwd~~~~~~~~~~~~----- 217 (494)
..|++||..+. ++...-.+-.+.|+++.|..+. ++++.|. ....+..||+.+..- ..+.+
T Consensus 16 ~~lC~yd~~~~-------qW~~~g~~i~G~V~~l~~~~~~-~Llv~G~ft~~~~~~~~la~yd~~~~~w-~~~~~~~s~~ 86 (281)
T PF12768_consen 16 PGLCLYDTDNS-------QWSSPGNGISGTVTDLQWASNN-QLLVGGNFTLNGTNSSNLATYDFKNQTW-SSLGGGSSNS 86 (281)
T ss_pred CEEEEEECCCC-------EeecCCCCceEEEEEEEEecCC-EEEEEEeeEECCCCceeEEEEecCCCee-eecCCccccc
Confidence 45999998877 4444444566789999998654 6777774 356788999876642 23332
Q ss_pred CCCceEEEEEcC-CCCEEE-EEe---CCCeEEEEeCCCCc
Q psy14130 218 HPDVINCLSFNR-DGSRLV-TTC---KDKTVRVLDPRTGL 252 (494)
Q Consensus 218 h~~~v~~l~~~~-~~~~l~-s~~---~d~~v~iwd~~~~~ 252 (494)
-.++|..+.+.. |+..+. .|. .+..|..||=.+..
T Consensus 87 ipgpv~a~~~~~~d~~~~~~aG~~~~g~~~l~~~dGs~W~ 126 (281)
T PF12768_consen 87 IPGPVTALTFISNDGSNFWVAGRSANGSTFLMKYDGSSWS 126 (281)
T ss_pred CCCcEEEEEeeccCCceEEEeceecCCCceEEEEcCCceE
Confidence 247788887754 443343 332 23456677644433
|
|
| >COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.86 E-value=13 Score=36.02 Aligned_cols=156 Identities=17% Similarity=0.197 Sum_probs=85.7
Q ss_pred CceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce-EEEeeec-CC---CCce-EEEEECCCCeEEEEEecCCCCceEEEE
Q psy14130 220 DVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLV-ISQGVCH-PG---TRSS-KAVFIGDTGRIVTTGFSRHSDRQVGLW 293 (494)
Q Consensus 220 ~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~-~~~~~~~-~~---~~~~-~~~~~~~~~~l~~~g~~~~~d~~i~iw 293 (494)
..|..+-..|||+.+..-+. ..+.++++.+... .+++... .+ ..+. ...... ++.-+.++ +.||-|.-|
T Consensus 221 ~~v~qllL~Pdg~~LYv~~g-~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~-Gg~SLLv~---~~dG~vsQW 295 (733)
T COG4590 221 SDVSQLLLTPDGKTLYVRTG-SELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLS-GGFSLLVV---HEDGLVSQW 295 (733)
T ss_pred cchHhhEECCCCCEEEEecC-CeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHh-CceeEEEE---cCCCceeee
Confidence 44566778899998887666 6888998876542 1122111 11 1111 111122 23333344 488888877
Q ss_pred -eCCCCCCceeEe--eecCC-CceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCc
Q psy14130 294 -DENDLNTPLALE--TVDSS-SGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRG 369 (494)
Q Consensus 294 -d~~~~~~~~~~~--~~~~~-~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ 369 (494)
|.+....+.... ...-. ..+..+.-. +.+.-|++-...|++.++.....+++... .. -....-++++|.+.
T Consensus 296 Fdvr~~~~p~l~h~R~f~l~pa~~~~l~pe-~~rkgF~~l~~~G~L~~f~st~~~~lL~~-~~---~~~~~~~~~Sp~~~ 370 (733)
T COG4590 296 FDVRRDGQPHLNHIRNFKLAPAEVQFLLPE-TNRKGFYSLYRNGTLQSFYSTSEKLLLFE-RA---YQAPQLVAMSPNQA 370 (733)
T ss_pred eeeecCCCCcceeeeccccCcccceeeccc-cccceEEEEcCCCceeeeecccCcceehh-hh---hcCcceeeeCcccc
Confidence 666544332211 11111 122222111 22333467778888888876665543211 11 23466789999999
Q ss_pred eeeec-cceeEEEEeeC
Q psy14130 370 CDVTQ-CEIFRFFKLHT 385 (494)
Q Consensus 370 ~~~~~-~~~~~~~~l~~ 385 (494)
.+++. .+.++++.+.+
T Consensus 371 ~Ll~e~~gki~~~~l~N 387 (733)
T COG4590 371 YLLSEDQGKIRLAQLEN 387 (733)
T ss_pred hheeecCCceEEEEecC
Confidence 88886 77899999887
|
|
| >PF14727 PHTB1_N: PTHB1 N-terminus | Back alignment and domain information |
|---|
Probab=89.80 E-value=21 Score=34.98 Aligned_cols=148 Identities=8% Similarity=0.045 Sum_probs=83.9
Q ss_pred cCCCCCEEEEEeCCCeEEEEECCCCe-----EEEEecCCCCceEEEEEcC----CCCEEEEEeCCCeEEEEeCCCC----
Q psy14130 185 HPTAENVVASAGFDYLIILWDVGKGE-----ALTVIDCHPDVINCLSFNR----DGSRLVTTCKDKTVRVLDPRTG---- 251 (494)
Q Consensus 185 ~p~~~~~l~s~s~d~~v~iwd~~~~~-----~~~~~~~h~~~v~~l~~~~----~~~~l~s~~~d~~v~iwd~~~~---- 251 (494)
++++...++.||..|.++|++...+. .+... .-..+|..+.... .....+..-.-+++.+|.+...
T Consensus 33 ~~~~~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~-~l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~vY~v~~~~g~~ 111 (418)
T PF14727_consen 33 SPSGSDKIIVGSYSGILRIYDPSGNEFQPEDLLLET-QLKDPILQVECGKFVSGSEDLQLAVLHPRKLSVYSVSLVDGTV 111 (418)
T ss_pred CCCCccEEEEeccccEEEEEccCCCCCCCccEEEEE-ecCCcEEEEEeccccCCCCcceEEEecCCEEEEEEEEecCCCc
Confidence 34445689999999999999996543 22222 2457888887643 2223333355678888887321
Q ss_pred ---c--eEEEeeecC-CCCceEEEEECCC----CeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCC
Q psy14130 252 ---L--VISQGVCHP-GTRSSKAVFIGDT----GRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHD 321 (494)
Q Consensus 252 ---~--~~~~~~~~~-~~~~~~~~~~~~~----~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 321 (494)
. .+..+..|. ......+++-+-+ ..++.+= +.||.+.+|+-+...- ...+...--.-.+.|.+.
T Consensus 112 ~~g~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQ---S~DG~L~~feqe~~~f---~~~lp~~llPgPl~Y~~~ 185 (418)
T PF14727_consen 112 EHGNQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQ---SMDGSLSFFEQESFAF---SRFLPDFLLPGPLCYCPR 185 (418)
T ss_pred ccCcEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEE---ecCceEEEEeCCcEEE---EEEcCCCCCCcCeEEeec
Confidence 1 122222222 2213334433322 3455555 6899999999654221 111222222234577787
Q ss_pred CCEEEEEEeCCCcEEEEEe
Q psy14130 322 TRILFLAGKGDGNIRYYEL 340 (494)
Q Consensus 322 ~~~l~~~g~~dg~i~~wd~ 340 (494)
...+ ++++.+..+.-|..
T Consensus 186 tDsf-vt~sss~~l~~Yky 203 (418)
T PF14727_consen 186 TDSF-VTASSSWTLECYKY 203 (418)
T ss_pred CCEE-EEecCceeEEEecH
Confidence 7777 67767777777775
|
|
| >COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=89.63 E-value=13 Score=32.18 Aligned_cols=169 Identities=14% Similarity=0.069 Sum_probs=83.8
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
++|++||+.+++.... ..+. ...+..=-...-++.+.+-.-.+|.-..+|..+-+++..+. .++.=+.++-
T Consensus 68 S~ir~~~L~~gq~~~s-----~~l~--~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg~~~-y~GeGWgLt~- 138 (262)
T COG3823 68 SKIRVSDLTTGQEIFS-----EKLA--PDTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELGRFS-YEGEGWGLTS- 138 (262)
T ss_pred ceeEEEeccCceEEEE-----eecC--CccccccceeeccceEEEEEeccceeEEEChHHhhhhcccc-cCCcceeeec-
Confidence 4699999998843211 1111 01111100111122333444557888889988877766654 3333344444
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceEEEe----eecCCCCceEEEEECCCCeEEEEEecC-------CCCceE-EEEeCC
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGLVISQG----VCHPGTRSSKAVFIGDTGRIVTTGFSR-------HSDRQV-GLWDEN 296 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~g~~~-------~~d~~i-~iwd~~ 296 (494)
|+..|+.++...+++.-|+++-....+. .+..-...+.+.|.. +.+++--|-. -..|.| ...|+.
T Consensus 139 -d~~~LimsdGsatL~frdP~tfa~~~~v~VT~~g~pv~~LNELE~Vd--G~lyANVw~t~~I~rI~p~sGrV~~widlS 215 (262)
T COG3823 139 -DDKNLIMSDGSATLQFRDPKTFAELDTVQVTDDGVPVSKLNELEWVD--GELYANVWQTTRIARIDPDSGRVVAWIDLS 215 (262)
T ss_pred -CCcceEeeCCceEEEecCHHHhhhcceEEEEECCeecccccceeeec--cEEEEeeeeecceEEEcCCCCcEEEEEEcc
Confidence 5666777777778999888765433322 222212233334432 3444433200 122222 223433
Q ss_pred CCCCceeEeeecCCCceEEeEEeCCCCEEEEEEe
Q psy14130 297 DLNTPLALETVDSSSGVLFPYYDHDTRILFLAGK 330 (494)
Q Consensus 297 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~ 330 (494)
........ ...+..-.+.+++.|++..++++|.
T Consensus 216 ~L~~~~~~-~~~~~nvlNGIA~~~~~~r~~iTGK 248 (262)
T COG3823 216 GLLKELNL-DKSNDNVLNGIAHDPQQDRFLITGK 248 (262)
T ss_pred CCchhcCc-cccccccccceeecCcCCeEEEecC
Confidence 32111111 1112234567899999988879884
|
|
| >KOG2280|consensus | Back alignment and domain information |
|---|
Probab=89.57 E-value=10 Score=39.16 Aligned_cols=193 Identities=14% Similarity=0.129 Sum_probs=91.1
Q ss_pred EEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEe-
Q psy14130 179 VGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQG- 257 (494)
Q Consensus 179 V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~- 257 (494)
..++.-+|..-.-++ +.-..|+|+++ +|+.+..+.-..+.+..+.|+.+. .|++...||++++|++-... +...
T Consensus 46 pIAV~r~p~~~~~~~--~a~~~I~If~~-sG~lL~~~~w~~~~lI~mgWs~~e-eLI~v~k~g~v~Vy~~~ge~-ie~~s 120 (829)
T KOG2280|consen 46 PIAVTRSPSKLVPLY--SARPYIRIFNI-SGQLLGRILWKHGELIGMGWSDDE-ELICVQKDGTVHVYGLLGEF-IESNS 120 (829)
T ss_pred ceEEEeccccccccc--ccceeEEEEec-cccchHHHHhcCCCeeeecccCCc-eEEEEeccceEEEeecchhh-hcccc
Confidence 345555553211122 33456888887 566666554333478899999655 56778899999999986332 2221
Q ss_pred e--ecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCC-CceEEe-EEeCCCC-EEEE-EEeC
Q psy14130 258 V--CHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSS-SGVLFP-YYDHDTR-ILFL-AGKG 331 (494)
Q Consensus 258 ~--~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~-~~v~~~-~~~~~~~-~l~~-~g~~ 331 (494)
. ......+..+.+..+ |-.+.+. ++..+.+-+..... .......+.. -...+- ++.|... .+++ ..-.
T Consensus 121 vg~e~~~~~I~ec~~f~~-GVavlt~----~g~v~~i~~~~~~~-~~~~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~~ 194 (829)
T KOG2280|consen 121 VGFESQMSDIVECRFFHN-GVAVLTV----SGQVILINGVEEPK-LRKMPDIPYNELPKSCWTVFQPHRQSTILLDVDVA 194 (829)
T ss_pred cccccccCceeEEEEecC-ceEEEec----CCcEEEEcCCCcch-hhhCCCCCCccCCCcceeEecCCCcceeEEeechh
Confidence 1 112222555555554 4444443 23333444333211 1111111000 000111 1222211 1111 1101
Q ss_pred CCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccceeEEEEeeC
Q psy14130 332 DGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 332 dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~~ 385 (494)
.+ ..++...........+.. ..+.+..++.+|++..++.=.+..++|.+..
T Consensus 195 v~-~~~~q~~~~~~q~~~~~~--~~~~~~ki~VS~n~~~laLyt~~G~i~~vs~ 245 (829)
T KOG2280|consen 195 VG-LHICQVEESRVQLHALSW--PNSSVVKISVSPNRRFLALYTETGKIWVVSI 245 (829)
T ss_pred hh-hcccceecccccccccCC--CCceEEEEEEcCCcceEEEEecCCcEEEEec
Confidence 11 122223322211111111 1256888999999998888766777776654
|
|
| >COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=89.54 E-value=13 Score=32.13 Aligned_cols=176 Identities=14% Similarity=0.104 Sum_probs=94.4
Q ss_pred CEEEEEeCC--CeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEE-EeCCCeEEEEeCCCCceEEEeeecCCCCce
Q psy14130 190 NVVASAGFD--YLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVT-TCKDKTVRVLDPRTGLVISQGVCHPGTRSS 266 (494)
Q Consensus 190 ~~l~s~s~d--~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s-~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~ 266 (494)
.++.+.+.- ..|++||+.+++.+.+-.-....+..=-...-|..+.. .=.+|....+|.++-+++..+.-.... .
T Consensus 57 ~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg~~~y~GeG--W 134 (262)
T COG3823 57 HILESTGLYGFSKIRVSDLTTGQEIFSEKLAPDTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELGRFSYEGEG--W 134 (262)
T ss_pred EEEEeccccccceeEEEeccCceEEEEeecCCccccccceeeccceEEEEEeccceeEEEChHHhhhhcccccCCcc--e
Confidence 566666653 47999999999877654422122221111111333333 336788899999988877776544332 4
Q ss_pred EEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceE---EeEEeCCCCEEEEEEeCCCcEEEEEeeCC
Q psy14130 267 KAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVL---FPYYDHDTRILFLAGKGDGNIRYYELTNE 343 (494)
Q Consensus 267 ~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~---~~~~~~~~~~l~~~g~~dg~i~~wd~~~~ 343 (494)
.++ .++..++.+. ...+++.-|..+......+.......+|. -+.|- ||..+ +---.+..|...|..+|
T Consensus 135 gLt--~d~~~Limsd----GsatL~frdP~tfa~~~~v~VT~~g~pv~~LNELE~V-dG~ly-ANVw~t~~I~rI~p~sG 206 (262)
T COG3823 135 GLT--SDDKNLIMSD----GSATLQFRDPKTFAELDTVQVTDDGVPVSKLNELEWV-DGELY-ANVWQTTRIARIDPDSG 206 (262)
T ss_pred eee--cCCcceEeeC----CceEEEecCHHHhhhcceEEEEECCeecccccceeee-ccEEE-EeeeeecceEEEcCCCC
Confidence 443 3444555443 45677777777665544443332332332 23332 44333 55555556666666666
Q ss_pred CceEEe--------cc-cccCCCCeeEEEEecCC-ceeeecc
Q psy14130 344 RPYIHF--------LN-QSLSGAPQRGLGFMPKR-GCDVTQC 375 (494)
Q Consensus 344 ~~~~~~--------~~-~~~~~~~v~~~~~~p~~-~~~~~~~ 375 (494)
+...-+ +. .-.+.+...++++.|++ .+++++-
T Consensus 207 rV~~widlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iTGK 248 (262)
T COG3823 207 RVVAWIDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLITGK 248 (262)
T ss_pred cEEEEEEccCCchhcCccccccccccceeecCcCCeEEEecC
Confidence 532111 11 11123457889999876 5666653
|
|
| >KOG1916|consensus | Back alignment and domain information |
|---|
Probab=89.53 E-value=0.34 Score=50.15 Aligned_cols=235 Identities=16% Similarity=0.184 Sum_probs=122.0
Q ss_pred EEEEEEcC---CCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEE-----------EcCCCCEEEEEeCCCeEE
Q psy14130 179 VGYIEWHP---TAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLS-----------FNRDGSRLVTTCKDKTVR 244 (494)
Q Consensus 179 V~~~~~~p---~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~-----------~~~~~~~l~s~~~d~~v~ 244 (494)
+.-+.|.| +. -++..+-.+++|++..+.+... ..+.+|...++.++ .+|||..++.++.||.++
T Consensus 183 ~~~V~wcp~~~~~-~~ic~~~~~~~i~lL~~~ra~~-~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~ 260 (1283)
T KOG1916|consen 183 PQLVSWCPIAVNK-VYICYGLKGGEIRLLNINRALR-SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVG 260 (1283)
T ss_pred cceeeeccccccc-ceeeeccCCCceeEeeechHHH-HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccc
Confidence 34455544 43 4667777788888877755432 33445765555443 589999999999999998
Q ss_pred EEeCC-----CCceEEEeeecCCCCceEEEEECCCC---------eEEEEEecCCCCceEEEEeCCCCCCceeEeeecCC
Q psy14130 245 VLDPR-----TGLVISQGVCHPGTRSSKAVFIGDTG---------RIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSS 310 (494)
Q Consensus 245 iwd~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~---------~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 310 (494)
+|.+. .-++++.++.|.+..-.+..+..+.. .++++. ..++.+++|.-....+.+.. ..
T Consensus 261 f~Qiyi~g~~~~rclhewkphd~~p~vC~lc~~~~~~~v~i~~w~~~Ittt---d~nre~k~w~~a~w~Cll~~----~~ 333 (1283)
T KOG1916|consen 261 FYQIYITGKIVHRCLHEWKPHDKHPRVCWLCHKQEILVVSIGKWVLRITTT---DVNREEKFWAEAPWQCLLDK----LI 333 (1283)
T ss_pred eeeeeeeccccHhhhhccCCCCCCCceeeeeccccccCCccceeEEEEecc---cCCcceeEeeccchhhhhhh----cc
Confidence 88653 33477788888854233333332211 233444 55778899986544433111 11
Q ss_pred CceEEeEEeCCCCEE-----------EEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEE--ecC---Cceeeec
Q psy14130 311 SGVLFPYYDHDTRIL-----------FLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGF--MPK---RGCDVTQ 374 (494)
Q Consensus 311 ~~v~~~~~~~~~~~l-----------~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~--~p~---~~~~~~~ 374 (494)
..+..+. -++++.- +++-+-|+.|.+|--+.-.+.... ......+|.+..| +|. ...+..+
T Consensus 334 d~v~iV~-p~~~~v~~~~~~~~~~~~~v~r~v~~~i~~~qn~~a~~~~vs--~~~~~hpV~S~i~v~S~~R~~h~e~~~~ 410 (1283)
T KOG1916|consen 334 DGVQIVG-PHDGEVTDLSMCQWMTTRLVSRSVDGTIKIWQNRKAQPLVVS--RPHDGHPVLSAIFVTSPERPDHIELITG 410 (1283)
T ss_pred cceEeec-CCCccccchhhhHHHHHHHHHhhhHHHHHHhhcchhhhhhhh--hhhhcceeccccccccCCCccccccccC
Confidence 1222222 2222211 134566888888865543322111 1112334444333 343 2333443
Q ss_pred ---cceeEEEEeeCCCCeEEEeEE-----EeeCC----CCCCCCCCCCCCCCCCcccCHhhhc
Q psy14130 375 ---CEIFRFFKLHTTRNMCEPISM-----IVPRK----SDQFQDDLYPDTAAPVPALSAADWY 425 (494)
Q Consensus 375 ---~~~~~~~~l~~~~~~~~~~~~-----~~pr~----~~~~~~~~~~~~~~~~~~~~~~~w~ 425 (494)
...+++|-.....+...|-.. .+.-+ ...|+.+.+|+.....++++..+.+
T Consensus 411 ~~~nr~~~i~~s~g~~g~ls~a~v~~k~rcv~tklqd~~~~~ePq~~~d~~n~~~als~h~~~ 473 (1283)
T KOG1916|consen 411 GPLNRELKIWVSAGEEGWLSPADVESKWRCVQTKLQDLKSSTEPQAEPDFFNQVIALSEHGLL 473 (1283)
T ss_pred CcchhhhhhhhhcccccccchhhhhhhHHHhhhhhhhcccccCCccchhhhcchHHHHHHHHH
Confidence 334555544332211111111 11111 2346677788888788887776543
|
|
| >TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat | Back alignment and domain information |
|---|
Probab=89.37 E-value=1 Score=27.45 Aligned_cols=27 Identities=11% Similarity=0.309 Sum_probs=23.0
Q ss_pred CCCCEEEEEEeCCCcEEEEEeeCCCce
Q psy14130 320 HDTRILFLAGKGDGNIRYYELTNERPY 346 (494)
Q Consensus 320 ~~~~~l~~~g~~dg~i~~wd~~~~~~~ 346 (494)
|+++.||++...++.|.++|..+++.+
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~ 27 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVI 27 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEE
Confidence 688999898888999999999877654
|
This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400). |
| >PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates | Back alignment and domain information |
|---|
Probab=89.28 E-value=3.9 Score=42.12 Aligned_cols=70 Identities=17% Similarity=0.165 Sum_probs=43.6
Q ss_pred CEEEEEeCCCeEEEEECCC----CeEEEE--ecC--------------------CCCceEEEEEcC----CCCEEEEEeC
Q psy14130 190 NVVASAGFDYLIILWDVGK----GEALTV--IDC--------------------HPDVINCLSFNR----DGSRLVTTCK 239 (494)
Q Consensus 190 ~~l~s~s~d~~v~iwd~~~----~~~~~~--~~~--------------------h~~~v~~l~~~~----~~~~l~s~~~ 239 (494)
..++.+..||.+....... +..... +.. -...+.+++.+. +..+|++.+.
T Consensus 159 ~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~tl~~ 238 (547)
T PF11715_consen 159 ANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEINDDTFLFTLSR 238 (547)
T ss_dssp SBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ETTTEEEEEET
T ss_pred CEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCCCCEEEEEeC
Confidence 5677777888887777654 221111 110 123456666766 6789999999
Q ss_pred CCeEEEEeCCCCceEEEeee
Q psy14130 240 DKTVRVLDPRTGLVISQGVC 259 (494)
Q Consensus 240 d~~v~iwd~~~~~~~~~~~~ 259 (494)
|+++|+||+.+++++.+...
T Consensus 239 D~~LRiW~l~t~~~~~~~~~ 258 (547)
T PF11715_consen 239 DHTLRIWSLETGQCLATIDL 258 (547)
T ss_dssp TSEEEEEETTTTCEEEEEET
T ss_pred CCeEEEEECCCCeEEEEecc
Confidence 99999999999998766533
|
The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A. |
| >PF13449 Phytase-like: Esterase-like activity of phytase | Back alignment and domain information |
|---|
Probab=89.18 E-value=21 Score=33.96 Aligned_cols=161 Identities=15% Similarity=0.176 Sum_probs=88.5
Q ss_pred CceEEEEEcCCCCEEEEEeCCCe------EEEEeCCC--C--c---eEE--EeeecCCC-------CceEEEEECCCCeE
Q psy14130 220 DVINCLSFNRDGSRLVTTCKDKT------VRVLDPRT--G--L---VIS--QGVCHPGT-------RSSKAVFIGDTGRI 277 (494)
Q Consensus 220 ~~v~~l~~~~~~~~l~s~~~d~~------v~iwd~~~--~--~---~~~--~~~~~~~~-------~~~~~~~~~~~~~l 277 (494)
+.+.+|.+.+++..+++.+.++. +..+++.. + . ... .+....+. ..-.+++.++ +.+
T Consensus 20 GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~-g~~ 98 (326)
T PF13449_consen 20 GGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPD-GSF 98 (326)
T ss_pred CcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecC-CCE
Confidence 55677888865556666676666 55554443 1 0 011 11111111 2346777444 666
Q ss_pred EEEEecCCCC------ceEEEEeCCCCCC------ceeE-------eeecCCCceEEeEEeCCCCEEEEEE----eCCC-
Q psy14130 278 VTTGFSRHSD------RQVGLWDENDLNT------PLAL-------ETVDSSSGVLFPYYDHDTRILFLAG----KGDG- 333 (494)
Q Consensus 278 ~~~g~~~~~d------~~i~iwd~~~~~~------~~~~-------~~~~~~~~v~~~~~~~~~~~l~~~g----~~dg- 333 (494)
+.+. -.+ ..|..++.. +.. |..+ .......+.-.++++|+|+.|+++- ..|+
T Consensus 99 ~is~---E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E~~l~~d~~ 174 (326)
T PF13449_consen 99 WISS---EGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAMESPLKQDGP 174 (326)
T ss_pred EEEe---CCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEECccccCCCc
Confidence 6665 344 678888765 222 1111 1223446788899999999664442 1122
Q ss_pred -c-------EEEEEee--C-CCceEEeccccc------CCCCeeEEEEecCCceeeec-------cceeEEEEeeC
Q psy14130 334 -N-------IRYYELT--N-ERPYIHFLNQSL------SGAPQRGLGFMPKRGCDVTQ-------CEIFRFFKLHT 385 (494)
Q Consensus 334 -~-------i~~wd~~--~-~~~~~~~~~~~~------~~~~v~~~~~~p~~~~~~~~-------~~~~~~~~l~~ 385 (494)
. ++++.+. + +++...+..... ....+..+++.+++.+++.. ....|++.+..
T Consensus 175 ~~~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLvLER~~~~~~~~~~ri~~v~l 250 (326)
T PF13449_consen 175 RANPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLVLERDFSPGTGNYKRIYRVDL 250 (326)
T ss_pred ccccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEEEEccCCCCccceEEEEEEEc
Confidence 1 5555544 3 323333333322 35678999999999888874 23667777665
|
|
| >COG4257 Vgb Streptogramin lyase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=89.17 E-value=14 Score=33.47 Aligned_cols=134 Identities=16% Similarity=0.144 Sum_probs=84.0
Q ss_pred CceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCC
Q psy14130 220 DVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLN 299 (494)
Q Consensus 220 ~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~ 299 (494)
..-..++-.|||..-+++...+.|--.|.++|+...- ....+.....+..-|+++..++-+ .. -|.-.|.++..
T Consensus 62 ~ap~dvapapdG~VWft~qg~gaiGhLdP~tGev~~y-pLg~Ga~Phgiv~gpdg~~Witd~----~~-aI~R~dpkt~e 135 (353)
T COG4257 62 SAPFDVAPAPDGAVWFTAQGTGAIGHLDPATGEVETY-PLGSGASPHGIVVGPDGSAWITDT----GL-AIGRLDPKTLE 135 (353)
T ss_pred CCccccccCCCCceEEecCccccceecCCCCCceEEE-ecCCCCCCceEEECCCCCeeEecC----cc-eeEEecCcccc
Confidence 4456778889999889999899999999999985443 333444467777778866655543 22 55556765543
Q ss_pred CceeEeeecC-CCceEEeEEeCCCCEEEEEEeC---------CCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCc
Q psy14130 300 TPLALETVDS-SSGVLFPYYDHDTRILFLAGKG---------DGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRG 369 (494)
Q Consensus 300 ~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~g~~---------dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ 369 (494)
........++ ........|+++|..- .++.. .+.|++|+... +....++|..|||.
T Consensus 136 vt~f~lp~~~a~~nlet~vfD~~G~lW-Ft~q~G~yGrLdPa~~~i~vfpaPq-------------G~gpyGi~atpdGs 201 (353)
T COG4257 136 VTRFPLPLEHADANLETAVFDPWGNLW-FTGQIGAYGRLDPARNVISVFPAPQ-------------GGGPYGICATPDGS 201 (353)
T ss_pred eEEeecccccCCCcccceeeCCCccEE-EeeccccceecCcccCceeeeccCC-------------CCCCcceEECCCCc
Confidence 2111111222 2557778999999887 55532 23345554433 23356788888887
Q ss_pred eeee
Q psy14130 370 CDVT 373 (494)
Q Consensus 370 ~~~~ 373 (494)
+-.+
T Consensus 202 vwya 205 (353)
T COG4257 202 VWYA 205 (353)
T ss_pred EEEE
Confidence 6555
|
|
| >PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases | Back alignment and domain information |
|---|
Probab=88.94 E-value=11 Score=35.82 Aligned_cols=103 Identities=16% Similarity=0.239 Sum_probs=60.3
Q ss_pred ceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEee-----ecCCCceEEeEEeCC---CCEEEEEEeCC----
Q psy14130 265 SSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALET-----VDSSSGVLFPYYDHD---TRILFLAGKGD---- 332 (494)
Q Consensus 265 ~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~-----~~~~~~v~~~~~~~~---~~~l~~~g~~d---- 332 (494)
...++|.|+ ++++++- ..|.|++++.. ......+.. .....+...++++|+ ..+||++.+..
T Consensus 4 P~~~a~~pd-G~l~v~e----~~G~i~~~~~~-g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~ 77 (331)
T PF07995_consen 4 PRSMAFLPD-GRLLVAE----RSGRIWVVDKD-GSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDG 77 (331)
T ss_dssp EEEEEEETT-SCEEEEE----TTTEEEEEETT-TEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSS
T ss_pred ceEEEEeCC-CcEEEEe----CCceEEEEeCC-CcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCC
Confidence 678999999 7888877 69999999932 222111211 123467889999994 46776776632
Q ss_pred ----CcEEEEEeeCCC----ceEEecccc----cCCCCeeEEEEecCCceeee
Q psy14130 333 ----GNIRYYELTNER----PYIHFLNQS----LSGAPQRGLGFMPKRGCDVT 373 (494)
Q Consensus 333 ----g~i~~wd~~~~~----~~~~~~~~~----~~~~~v~~~~~~p~~~~~~~ 373 (494)
..|.-|.+..+. ....++... ........|+|.||+.+.++
T Consensus 78 ~~~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs 130 (331)
T PF07995_consen 78 GDNDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVS 130 (331)
T ss_dssp SSEEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEE
T ss_pred CCcceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEE
Confidence 345556555441 111122111 12345678999999987776
|
The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B .... |
| >PLN02193 nitrile-specifier protein | Back alignment and domain information |
|---|
Probab=88.89 E-value=28 Score=35.07 Aligned_cols=107 Identities=12% Similarity=0.090 Sum_probs=51.0
Q ss_pred CEEEEEeCC-----CeEEEEECCCCeEEEE--ec--CCCCceEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCCceEE
Q psy14130 190 NVVASAGFD-----YLIILWDVGKGEALTV--ID--CHPDVINCLSFNRDGSRLVTTCKD-----KTVRVLDPRTGLVIS 255 (494)
Q Consensus 190 ~~l~s~s~d-----~~v~iwd~~~~~~~~~--~~--~h~~~v~~l~~~~~~~~l~s~~~d-----~~v~iwd~~~~~~~~ 255 (494)
.+++.|+.+ ..+..+|+.+.+-... +. .....-.+++ .-++++++.|+.+ ..+..||+.+.+-..
T Consensus 230 ~lYvfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~h~~~-~~~~~iYv~GG~~~~~~~~~~~~yd~~t~~W~~ 308 (470)
T PLN02193 230 TLYVFGGRDASRQYNGFYSFDTTTNEWKLLTPVEEGPTPRSFHSMA-ADEENVYVFGGVSATARLKTLDSYNIVDKKWFH 308 (470)
T ss_pred EEEEECCCCCCCCCccEEEEECCCCEEEEcCcCCCCCCCccceEEE-EECCEEEEECCCCCCCCcceEEEEECCCCEEEe
Confidence 577777655 3578889887653221 11 0111111222 2256666777654 347788888765321
Q ss_pred Eee--ecCCCC-ceEEEEECCCCeEEEEE-ecCCCCceEEEEeCCCCC
Q psy14130 256 QGV--CHPGTR-SSKAVFIGDTGRIVTTG-FSRHSDRQVGLWDENDLN 299 (494)
Q Consensus 256 ~~~--~~~~~~-~~~~~~~~~~~~l~~~g-~~~~~d~~i~iwd~~~~~ 299 (494)
.-. .....+ -..++.. + +++++.| ++...-..+.+||+.+..
T Consensus 309 ~~~~~~~~~~R~~~~~~~~-~-gkiyviGG~~g~~~~dv~~yD~~t~~ 354 (470)
T PLN02193 309 CSTPGDSFSIRGGAGLEVV-Q-GKVWVVYGFNGCEVDDVHYYDPVQDK 354 (470)
T ss_pred CCCCCCCCCCCCCcEEEEE-C-CcEEEEECCCCCccCceEEEECCCCE
Confidence 110 000111 1122222 3 3455444 322222568999987643
|
|
| >KOG4460|consensus | Back alignment and domain information |
|---|
Probab=88.45 E-value=24 Score=34.99 Aligned_cols=81 Identities=15% Similarity=0.130 Sum_probs=52.8
Q ss_pred ccEEEEEEcCCCCCEEEEEeCCCeEEEEEC---------CCCeEEEE---e-------c-CCCCceEEEEEcCCC---CE
Q psy14130 177 RRVGYIEWHPTAENVVASAGFDYLIILWDV---------GKGEALTV---I-------D-CHPDVINCLSFNRDG---SR 233 (494)
Q Consensus 177 ~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~---------~~~~~~~~---~-------~-~h~~~v~~l~~~~~~---~~ 233 (494)
-.|..+..++.| ..++-++.+|.+.+.=. +.|+.... + . ...-.+..++|+|+. ..
T Consensus 104 feV~~vl~s~~G-S~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~h 182 (741)
T KOG4460|consen 104 FEVYQVLLSPTG-SHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPH 182 (741)
T ss_pred EEEEEEEecCCC-ceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCce
Confidence 357788889999 56766777886655432 23322111 1 1 111245678899964 67
Q ss_pred EEEEeCCCeEEEEeCCCCceEEEee
Q psy14130 234 LVTTCKDKTVRVLDPRTGLVISQGV 258 (494)
Q Consensus 234 l~s~~~d~~v~iwd~~~~~~~~~~~ 258 (494)
|..-+.|..+|+||+.....+....
T Consensus 183 L~iL~sdnviRiy~lS~~telylqp 207 (741)
T KOG4460|consen 183 LVLLTSDNVIRIYSLSEPTELYLQP 207 (741)
T ss_pred EEEEecCcEEEEEecCCcchhhccC
Confidence 8888899999999998776554433
|
|
| >PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I [] | Back alignment and domain information |
|---|
Probab=88.19 E-value=38 Score=36.50 Aligned_cols=131 Identities=13% Similarity=0.157 Sum_probs=79.1
Q ss_pred ccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEE
Q psy14130 177 RRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQ 256 (494)
Q Consensus 177 ~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~ 256 (494)
.+...++|+|.....||.-...|.-.|||+...... + ... +-+.....|.| ++|...-
T Consensus 146 ~~~aDv~FnP~~~~q~AiVD~~G~Wsvw~i~~~~~~-----~-~~~----------~~~~~~~~gsi-~~d~~e~----- 203 (765)
T PF10214_consen 146 FPHADVAFNPWDQRQFAIVDEKGNWSVWDIKGRPKR-----K-SSN----------LRLSRNISGSI-IFDPEEL----- 203 (765)
T ss_pred CccceEEeccCccceEEEEeccCcEEEEEecccccc-----C-Ccc----------eeeccCCCccc-cCCCccc-----
Confidence 356789999987789999999999999999221110 0 111 11222222333 3333211
Q ss_pred eeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCC--CCEEEEEEeCCCc
Q psy14130 257 GVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHD--TRILFLAGKGDGN 334 (494)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~g~~dg~ 334 (494)
.. ..++.|.++.+.+|++. ...+.++|+++......+........+..+.-+|. +..+++|. ..
T Consensus 204 -----s~-w~rI~W~~~~~~lLv~~-----r~~l~~~d~~~~~~~~~l~~~~~~~~IlDv~~~~~~~~~~FiLTs---~e 269 (765)
T PF10214_consen 204 -----SN-WKRILWVSDSNRLLVCN-----RSKLMLIDFESNWQTEYLVTAKTWSWILDVKRSPDNPSHVFILTS---KE 269 (765)
T ss_pred -----Cc-ceeeEecCCCCEEEEEc-----CCceEEEECCCCCccchhccCCChhheeeEEecCCccceEEEEec---Ce
Confidence 22 57888988877777765 77899999987544221222234456777777776 33443433 56
Q ss_pred EEEEEeeCC
Q psy14130 335 IRYYELTNE 343 (494)
Q Consensus 335 i~~wd~~~~ 343 (494)
|...|+...
T Consensus 270 iiw~~~~~~ 278 (765)
T PF10214_consen 270 IIWLDVKSS 278 (765)
T ss_pred EEEEEccCC
Confidence 878888773
|
These proteins are found in fungi. |
| >PF14727 PHTB1_N: PTHB1 N-terminus | Back alignment and domain information |
|---|
Probab=88.09 E-value=28 Score=34.16 Aligned_cols=182 Identities=16% Similarity=0.151 Sum_probs=95.7
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCC-------------------
Q psy14130 190 NVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRT------------------- 250 (494)
Q Consensus 190 ~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~------------------- 250 (494)
.+++.=+.||.+.+++-+.-.....+.. ---.-.+.|.+.-..|++++.+..+..|....
T Consensus 146 ~~IcVQS~DG~L~~feqe~~~f~~~lp~-~llPgPl~Y~~~tDsfvt~sss~~l~~Yky~~La~~s~~~~~~~~~~~~~~ 224 (418)
T PF14727_consen 146 DFICVQSMDGSLSFFEQESFAFSRFLPD-FLLPGPLCYCPRTDSFVTASSSWTLECYKYQDLASASEASSRQSGTEQDIS 224 (418)
T ss_pred eEEEEEecCceEEEEeCCcEEEEEEcCC-CCCCcCeEEeecCCEEEEecCceeEEEecHHHhhhcccccccccccccccc
Confidence 6888889999999999765443333332 22223467888888899999888888886421
Q ss_pred -Cc-eEEEeeecCCCCceEEEE---ECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEe-----EEeC
Q psy14130 251 -GL-VISQGVCHPGTRSSKAVF---IGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFP-----YYDH 320 (494)
Q Consensus 251 -~~-~~~~~~~~~~~~~~~~~~---~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~-----~~~~ 320 (494)
++ ....+...-+..+..+.. ......+++.| .+.+.+.+... .......++......++ ...+
T Consensus 225 ~~k~l~~dWs~nlGE~~l~i~v~~~~~~~~~IvvLg-----er~Lf~l~~~G--~l~~~krLd~~p~~~~~Y~~~~~~~~ 297 (418)
T PF14727_consen 225 SGKKLNPDWSFNLGEQALDIQVVRFSSSESDIVVLG-----ERSLFCLKDNG--SLRFQKRLDYNPSCFCPYRVPWYNEP 297 (418)
T ss_pred ccccccceeEEECCceeEEEEEEEcCCCCceEEEEe-----cceEEEEcCCC--eEEEEEecCCceeeEEEEEeecccCC
Confidence 11 111122222222333332 22345677777 66677766532 33333344332222221 1122
Q ss_pred CCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEe---c-CCceeee-ccceeEEEEeeC
Q psy14130 321 DTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFM---P-KRGCDVT-QCEIFRFFKLHT 385 (494)
Q Consensus 321 ~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~---p-~~~~~~~-~~~~~~~~~l~~ 385 (494)
..+..++.++.++.+.||.=.+ ....... ...|| ++... . +|...+. .++.+.+--|-+
T Consensus 298 ~~~~~llV~t~t~~LlVy~d~~----L~WsA~l-~~~PV-al~v~~~~~~~G~IV~Ls~~G~L~v~YLGT 361 (418)
T PF14727_consen 298 STRLNLLVGTHTGTLLVYEDTT----LVWSAQL-PHVPV-ALSVANFNGLKGLIVSLSDEGQLSVSYLGT 361 (418)
T ss_pred CCceEEEEEecCCeEEEEeCCe----EEEecCC-CCCCE-EEEecccCCCCceEEEEcCCCcEEEEEeCC
Confidence 3333447788999999986333 1222222 12232 33332 1 3333322 477777776665
|
|
| >TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat | Back alignment and domain information |
|---|
Probab=88.02 E-value=3 Score=25.27 Aligned_cols=41 Identities=7% Similarity=0.096 Sum_probs=28.1
Q ss_pred CCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEE
Q psy14130 186 PTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSF 227 (494)
Q Consensus 186 p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~ 227 (494)
|++..++++...+++|.++|..+++.+..+.. ......++|
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~v-g~~P~~i~~ 41 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPV-GGYPFGVAV 41 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEEC-CCCCceEEe
Confidence 45544566666788999999999888877764 333344444
|
This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400). |
| >PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes [] | Back alignment and domain information |
|---|
Probab=87.88 E-value=28 Score=36.43 Aligned_cols=147 Identities=14% Similarity=0.110 Sum_probs=84.1
Q ss_pred CEEEEEeCCCeEEEEECCCCeEE------EEec----------------CCCCceEEEEEcC--CCCEEEEEeCCCeEEE
Q psy14130 190 NVVASAGFDYLIILWDVGKGEAL------TVID----------------CHPDVINCLSFNR--DGSRLVTTCKDKTVRV 245 (494)
Q Consensus 190 ~~l~s~s~d~~v~iwd~~~~~~~------~~~~----------------~h~~~v~~l~~~~--~~~~l~s~~~d~~v~i 245 (494)
++|+.|. .+.|.||++..-... ..+. .....|+.|.... +...|+.|..||.|.+
T Consensus 50 n~LFiA~-~s~I~Vy~~d~l~~~p~~~p~~~~~t~p~~~~~~D~~~s~~p~PHtIN~i~v~~lg~~EVLl~c~DdG~V~~ 128 (717)
T PF08728_consen 50 NLLFIAY-QSEIYVYDPDGLTQLPSRKPCLRFDTKPEFTSTPDRLISTWPFPHTINFIKVGDLGGEEVLLLCTDDGDVLA 128 (717)
T ss_pred CEEEEEE-CCEEEEEecCCcccccccccccccccCccccccccccccCCCCCceeeEEEecccCCeeEEEEEecCCeEEE
Confidence 5666665 678999998542211 1110 0112355554433 4558889999999999
Q ss_pred EeCCC-------C-------c----eEEEeeecCCCCceEEEEE-CCCCeEEEEEecCCCCceEEEEeCCCC-CCceeEe
Q psy14130 246 LDPRT-------G-------L----VISQGVCHPGTRSSKAVFI-GDTGRIVTTGFSRHSDRQVGLWDENDL-NTPLALE 305 (494)
Q Consensus 246 wd~~~-------~-------~----~~~~~~~~~~~~~~~~~~~-~~~~~l~~~g~~~~~d~~i~iwd~~~~-~~~~~~~ 305 (494)
|.+++ . . ....+..+-+.....++++ .+..+++|++ +....|.||-.... .......
T Consensus 129 Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~~~rlIAVS---sNs~~VTVFaf~l~~~r~~~~~ 205 (717)
T PF08728_consen 129 YYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYKKSRLIAVS---SNSQEVTVFAFALVDERFYHVP 205 (717)
T ss_pred EEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecCcceEEEEe---cCCceEEEEEEecccccccccc
Confidence 96521 0 0 0001222222236777776 2337899998 67777887754321 1111111
Q ss_pred eecCCCceEEeEEeCCC---C--EEEEEEeCCCcEEEEEe
Q psy14130 306 TVDSSSGVLFPYYDHDT---R--ILFLAGKGDGNIRYYEL 340 (494)
Q Consensus 306 ~~~~~~~v~~~~~~~~~---~--~l~~~g~~dg~i~~wd~ 340 (494)
...+...|.++.|-++. . ..+++++-.|.+.+|++
T Consensus 206 s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 206 SHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred ccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 22344567777776654 2 24478889999999988
|
RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance []. |
| >PLN02153 epithiospecifier protein | Back alignment and domain information |
|---|
Probab=87.33 E-value=28 Score=33.27 Aligned_cols=63 Identities=16% Similarity=0.044 Sum_probs=33.9
Q ss_pred CEEEEEeCC-----CeEEEEECCCCeEE--EEecC---CCCceEEEEEcCCCCEEEEEeCC-----------CeEEEEeC
Q psy14130 190 NVVASAGFD-----YLIILWDVGKGEAL--TVIDC---HPDVINCLSFNRDGSRLVTTCKD-----------KTVRVLDP 248 (494)
Q Consensus 190 ~~l~s~s~d-----~~v~iwd~~~~~~~--~~~~~---h~~~v~~l~~~~~~~~l~s~~~d-----------~~v~iwd~ 248 (494)
.+++.|+.+ ..+.++|+.+.+-. ..+.. ........+..-++++++.|+.+ ..+.+||+
T Consensus 87 ~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~p~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~v~~yd~ 166 (341)
T PLN02153 87 KLYIFGGRDEKREFSDFYSYDTVKNEWTFLTKLDEEGGPEARTFHSMASDENHVYVFGGVSKGGLMKTPERFRTIEAYNI 166 (341)
T ss_pred EEEEECCCCCCCccCcEEEEECCCCEEEEeccCCCCCCCCCceeeEEEEECCEEEEECCccCCCccCCCcccceEEEEEC
Confidence 577777753 25778898776432 12210 11111112222356667777653 25788999
Q ss_pred CCCc
Q psy14130 249 RTGL 252 (494)
Q Consensus 249 ~~~~ 252 (494)
.+.+
T Consensus 167 ~~~~ 170 (341)
T PLN02153 167 ADGK 170 (341)
T ss_pred CCCe
Confidence 8765
|
|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
Probab=87.02 E-value=45 Score=35.41 Aligned_cols=75 Identities=21% Similarity=0.215 Sum_probs=51.8
Q ss_pred ccEEEEEEcCCCCCEEEEEeCCCeEEEEECCC---------CeE---EEEe--------cCCCCceEEEEEcCC---CCE
Q psy14130 177 RRVGYIEWHPTAENVVASAGFDYLIILWDVGK---------GEA---LTVI--------DCHPDVINCLSFNRD---GSR 233 (494)
Q Consensus 177 ~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~---------~~~---~~~~--------~~h~~~v~~l~~~~~---~~~ 233 (494)
-.|..+..||+| .+||-.|..|.+.+.=.+. |+. .+++ ..+...|..+.|+|. +..
T Consensus 85 f~v~~i~~n~~g-~~lal~G~~~v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~ 163 (717)
T PF10168_consen 85 FEVHQISLNPTG-SLLALVGPRGVVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSH 163 (717)
T ss_pred eeEEEEEECCCC-CEEEEEcCCcEEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCe
Confidence 468899999999 6777777666443322221 111 1111 134567899999995 589
Q ss_pred EEEEeCCCeEEEEeCCCCc
Q psy14130 234 LVTTCKDKTVRVLDPRTGL 252 (494)
Q Consensus 234 l~s~~~d~~v~iwd~~~~~ 252 (494)
|+.-..|+++|+||+....
T Consensus 164 l~vLtsdn~lR~y~~~~~~ 182 (717)
T PF10168_consen 164 LVVLTSDNTLRLYDISDPQ 182 (717)
T ss_pred EEEEecCCEEEEEecCCCC
Confidence 9999999999999997654
|
It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells []. |
| >PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=86.97 E-value=3 Score=24.95 Aligned_cols=28 Identities=14% Similarity=0.395 Sum_probs=21.7
Q ss_pred CceEEeEEeCCCCEEEEEEeCC--CcEEEE
Q psy14130 311 SGVLFPYYDHDTRILFLAGKGD--GNIRYY 338 (494)
Q Consensus 311 ~~v~~~~~~~~~~~l~~~g~~d--g~i~~w 338 (494)
..-..+.|+|||+.|+.++..+ |.-.||
T Consensus 9 ~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 9 GDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp SSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred ccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 4567789999999998888777 777666
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A .... |
| >PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal | Back alignment and domain information |
|---|
Probab=86.85 E-value=14 Score=29.44 Aligned_cols=107 Identities=11% Similarity=0.100 Sum_probs=64.0
Q ss_pred EEEEcCCCCCEEEEEeCCCeEEEEECCCCe--------EEEEecCCCCceEEEEEcC-----CCCEEEEEeCCCeEEEEe
Q psy14130 181 YIEWHPTAENVVASAGFDYLIILWDVGKGE--------ALTVIDCHPDVINCLSFNR-----DGSRLVTTCKDKTVRVLD 247 (494)
Q Consensus 181 ~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~--------~~~~~~~h~~~v~~l~~~~-----~~~~l~s~~~d~~v~iwd 247 (494)
.-.|....+ .|+.++.-+.|.|++..... .+..+. -...|++|+-.+ +...|+.|+. ..+..||
T Consensus 3 iGkfDG~~p-cL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LN-in~~italaaG~l~~~~~~D~LliGt~-t~llaYD 79 (136)
T PF14781_consen 3 IGKFDGVHP-CLACATTGGKVFIHNPHERGQRTGRQDSDISFLN-INQEITALAAGRLKPDDGRDCLLIGTQ-TSLLAYD 79 (136)
T ss_pred EEEeCCCce-eEEEEecCCEEEEECCCccccccccccCceeEEE-CCCceEEEEEEecCCCCCcCEEEEecc-ceEEEEE
Confidence 345666663 67788888999999986432 344444 556777776444 2346666654 5799999
Q ss_pred CCCCceEEEeeecCCCCceEEEEE---CCCCeEEEEEecCCCCceEEEEeCC
Q psy14130 248 PRTGLVISQGVCHPGTRSSKAVFI---GDTGRIVTTGFSRHSDRQVGLWDEN 296 (494)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~g~~~~~d~~i~iwd~~ 296 (494)
+....-+..-..+.+ +..+.+- .....++.+| .+..|.-||..
T Consensus 80 V~~N~d~Fyke~~DG--vn~i~~g~~~~~~~~l~ivG----Gncsi~Gfd~~ 125 (136)
T PF14781_consen 80 VENNSDLFYKEVPDG--VNAIVIGKLGDIPSPLVIVG----GNCSIQGFDYE 125 (136)
T ss_pred cccCchhhhhhCccc--eeEEEEEecCCCCCcEEEEC----ceEEEEEeCCC
Confidence 987764433333333 3444432 2123455555 46666666654
|
|
| >KOG2247|consensus | Back alignment and domain information |
|---|
Probab=86.59 E-value=0.098 Score=50.27 Aligned_cols=143 Identities=18% Similarity=0.200 Sum_probs=94.5
Q ss_pred CceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCC
Q psy14130 220 DVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLN 299 (494)
Q Consensus 220 ~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~ 299 (494)
.......|-+.+.-++.++.+-.+..||-. ++........ + ....++|.-++..++... ...+.+.+||+.+..
T Consensus 35 v~pi~~~w~~e~~nlavaca~tiv~~YD~a-gq~~le~n~t-g-~aldm~wDkegdvlavlA---ek~~piylwd~n~ey 108 (615)
T KOG2247|consen 35 VGPIIHRWRPEGHNLAVACANTIVIYYDKA-GQVILELNPT-G-KALDMAWDKEGDVLAVLA---EKTGPIYLWDVNSEY 108 (615)
T ss_pred cccceeeEecCCCceehhhhhhHHHhhhhh-cceecccCCc-h-hHhhhhhccccchhhhhh---hcCCCeeechhhhhh
Confidence 334456688877778889999899999954 4444333322 2 256777877767776666 578899999997633
Q ss_pred CceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec
Q psy14130 300 TPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ 374 (494)
Q Consensus 300 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~ 374 (494)
... +. ......-.-+.|++.+..+ +.|...|.+.++...+.+..... -++...+..+++.+.+..+..+
T Consensus 109 tqq-LE-~gg~~s~sll~wsKg~~el-~ig~~~gn~viynhgtsR~iiv~---Gkh~RRgtq~av~lEd~vil~d 177 (615)
T KOG2247|consen 109 TQQ-LE-SGGTSSKSLLAWSKGTPEL-VIGNNAGNIVIYNHGTSRRIIVM---GKHQRRGTQIAVTLEDYVILCD 177 (615)
T ss_pred HHH-Hh-ccCcchHHHHhhccCCccc-cccccccceEEEeccchhhhhhh---cccccceeEEEecccceeeecC
Confidence 211 11 1122222237899999888 88889999999999887643221 1234568889998876655443
|
|
| >PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin | Back alignment and domain information |
|---|
Probab=86.34 E-value=6.4 Score=34.84 Aligned_cols=63 Identities=17% Similarity=0.272 Sum_probs=42.6
Q ss_pred CCCCCEEEEEeCCCeEEEEECCCCeEEEEe-------c-------CCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy14130 186 PTAENVVASAGFDYLIILWDVGKGEALTVI-------D-------CHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRT 250 (494)
Q Consensus 186 p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~-------~-------~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~ 250 (494)
..+ ++|+.-+.+|.+++||+.+++.+..- . .....|.++..+.+|.-|++-+ +|....||..-
T Consensus 20 ~~~-~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~~L 96 (219)
T PF07569_consen 20 CNG-SYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSPDL 96 (219)
T ss_pred eCC-CEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEecccc
Confidence 344 57888888999999999988754321 1 2445677777777777666554 45667776553
|
These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus |
| >KOG4460|consensus | Back alignment and domain information |
|---|
Probab=86.03 E-value=34 Score=34.00 Aligned_cols=27 Identities=7% Similarity=-0.036 Sum_probs=21.4
Q ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEe
Q psy14130 221 VINCLSFNRDGSRLVTTCKDKTVRVLD 247 (494)
Q Consensus 221 ~v~~l~~~~~~~~l~s~~~d~~v~iwd 247 (494)
.|..+..++.|+.++-.+.+|.+.++=
T Consensus 105 eV~~vl~s~~GS~VaL~G~~Gi~vMeL 131 (741)
T KOG4460|consen 105 EVYQVLLSPTGSHVALIGIKGLMVMEL 131 (741)
T ss_pred EEEEEEecCCCceEEEecCCeeEEEEc
Confidence 467788899999999888888766653
|
|
| >KOG1898|consensus | Back alignment and domain information |
|---|
Probab=85.90 E-value=57 Score=35.46 Aligned_cols=175 Identities=9% Similarity=0.039 Sum_probs=88.1
Q ss_pred eEEEEECCCCeEEEEecCC----CCceEEEEEcCCCC--EEEEEe-----------CCCeEEEEeCC-CCceEEEeeecC
Q psy14130 200 LIILWDVGKGEALTVIDCH----PDVINCLSFNRDGS--RLVTTC-----------KDKTVRVLDPR-TGLVISQGVCHP 261 (494)
Q Consensus 200 ~v~iwd~~~~~~~~~~~~h----~~~v~~l~~~~~~~--~l~s~~-----------~d~~v~iwd~~-~~~~~~~~~~~~ 261 (494)
.|++.|..+++.+..+.-. .-.+..+.|+.... +++.++ .+|.++.|+.- .|+ ..++..+.
T Consensus 854 ~I~~~d~~s~~~~~~~~l~~ne~a~~v~~~~fs~~~~~~~~~v~~~~~~~l~~~~~~~g~~ytyk~~~~g~-~lellh~T 932 (1205)
T KOG1898|consen 854 SIRVFDPKSGKIICLVELGQNEAAFSVCAVDFSSSEYQPFVAVGVATTEQLDSKSISSGFVYTYKFVRNGD-KLELLHKT 932 (1205)
T ss_pred eEEEEcCCCCceEEEEeecCCcchhheeeeeeccCCCceEEEEEeeccccccccccCCCceEEEEEEecCc-eeeeeecc
Confidence 5888888877765554421 12456667766433 233332 23446666643 333 22333333
Q ss_pred CCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecC-CCceEEeEEeCCCCEEEEEEeCCCcEEEEEe
Q psy14130 262 GTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDS-SSGVLFPYYDHDTRILFLAGKGDGNIRYYEL 340 (494)
Q Consensus 262 ~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~ 340 (494)
.....-.+..|-.+++++. -.+.+++||+.+.+ ++....... ...|..+.+ .+..+ +.|..--.++++-.
T Consensus 933 ~~~~~v~Ai~~f~~~~Lag-----vG~~l~~YdlG~K~-lLRk~e~k~~p~~Is~iqt--~~~RI-~VgD~qeSV~~~~y 1003 (1205)
T KOG1898|consen 933 EIPGPVGAICPFQGRVLAG-----VGRFLRLYDLGKKK-LLRKCELKFIPNRISSIQT--YGARI-VVGDIQESVHFVRY 1003 (1205)
T ss_pred CCCccceEEeccCCEEEEe-----cccEEEEeeCChHH-HHhhhhhccCceEEEEEee--cceEE-EEeeccceEEEEEE
Confidence 3323334556665655554 37899999987532 222111112 234444444 45556 44544445555555
Q ss_pred eCCCceEEecccccCCCCeeEEEEecCCceeeeccceeEEEEeeC
Q psy14130 341 TNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~~ 385 (494)
+.+.........-..+.-|+++.+.- ...++.+|....+|-+.-
T Consensus 1004 ~~~~n~l~~fadD~~pR~Vt~~~~lD-~~tvagaDrfGNi~~vR~ 1047 (1205)
T KOG1898|consen 1004 RREDNQLIVFADDPVPRHVTALELLD-YDTVAGADRFGNIAVVRI 1047 (1205)
T ss_pred ecCCCeEEEEeCCCccceeeEEEEec-CCceeeccccCcEEEEEC
Confidence 44332222222211223355555554 455666777777777665
|
|
| >PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes | Back alignment and domain information |
|---|
Probab=85.25 E-value=21 Score=32.06 Aligned_cols=139 Identities=14% Similarity=0.169 Sum_probs=71.9
Q ss_pred EEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeC---CCeEEEEeCCC----CceEEEee-ecCCCCceEEEEEC
Q psy14130 201 IILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCK---DKTVRVLDPRT----GLVISQGV-CHPGTRSSKAVFIG 272 (494)
Q Consensus 201 v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~---d~~v~iwd~~~----~~~~~~~~-~~~~~~~~~~~~~~ 272 (494)
-.+||+.+++....-....--+.+-.+.+||++|.+|+. ...+|+++... ........ -.....--...-.+
T Consensus 48 s~~yD~~tn~~rpl~v~td~FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~~~RWYpT~~~L~ 127 (243)
T PF07250_consen 48 SVEYDPNTNTFRPLTVQTDTFCSGGAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQSGRWYPTATTLP 127 (243)
T ss_pred EEEEecCCCcEEeccCCCCCcccCcCCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceECcccccCCCccccceECC
Confidence 468999887643221112223344567889999999875 35688998765 11111100 01111123445567
Q ss_pred CCCeEEEEEecCCCCceEEEEeCCCC-CCceeEeeec------CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCc
Q psy14130 273 DTGRIVTTGFSRHSDRQVGLWDENDL-NTPLALETVD------SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERP 345 (494)
Q Consensus 273 ~~~~l~~~g~~~~~d~~i~iwd~~~~-~~~~~~~~~~------~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~ 345 (494)
++..++..| ....+..+|..+.. ........+. ...--..+...|+|+.+ +.+..+ -.|||..+.+.
T Consensus 128 DG~vlIvGG---~~~~t~E~~P~~~~~~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lF-i~an~~--s~i~d~~~n~v 201 (243)
T PF07250_consen 128 DGRVLIVGG---SNNPTYEFWPPKGPGPGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLF-IFANRG--SIIYDYKTNTV 201 (243)
T ss_pred CCCEEEEeC---cCCCcccccCCccCCCCceeeecchhhhccCccccCceEEEcCCCCEE-EEEcCC--cEEEeCCCCeE
Confidence 755555555 44445666664321 1122211111 11222346778999988 555443 45678887754
|
Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium []. |
| >TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family | Back alignment and domain information |
|---|
Probab=85.19 E-value=58 Score=34.94 Aligned_cols=162 Identities=13% Similarity=0.093 Sum_probs=93.2
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEEecCCCCc--------eEEEEEcC----------------CCCEEEEEeCCCeEEE
Q psy14130 190 NVVASAGFDYLIILWDVGKGEALTVIDCHPDV--------INCLSFNR----------------DGSRLVTTCKDKTVRV 245 (494)
Q Consensus 190 ~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~--------v~~l~~~~----------------~~~~l~s~~~d~~v~i 245 (494)
..|+.++.++.|.-.|..+|+.+.++...... ...+.+.. .+..++.++.|+.+.-
T Consensus 195 g~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~LiA 274 (764)
T TIGR03074 195 DTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLIA 274 (764)
T ss_pred CEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEEE
Confidence 47777888899999999999988877632211 12233321 3447888999999999
Q ss_pred EeCCCCceEEEeeecCCC-------Cc----eEEEEEC--CCCeEEEEEecC------CCCceEEEEeCCCCCCceeEee
Q psy14130 246 LDPRTGLVISQGVCHPGT-------RS----SKAVFIG--DTGRIVTTGFSR------HSDRQVGLWDENDLNTPLALET 306 (494)
Q Consensus 246 wd~~~~~~~~~~~~~~~~-------~~----~~~~~~~--~~~~l~~~g~~~------~~d~~i~iwd~~~~~~~~~~~~ 306 (494)
.|.++|+.+..+...... .. ....-.| .++.+++.+... .-+|.|+-+|.++++..-....
T Consensus 275 LDA~TGk~~W~fg~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W~~~~ 354 (764)
T TIGR03074 275 LDADTGKLCEDFGNNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVWAWDP 354 (764)
T ss_pred EECCCCCEEEEecCCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCcEeeEEec
Confidence 999999987665321100 00 0000001 024444433100 1268899999887665333221
Q ss_pred e----------------cCCCceEEeEEeCCCCEEEEEEe-----------------CCCcEEEEEeeCCCceEEecc
Q psy14130 307 V----------------DSSSGVLFPYYDHDTRILFLAGK-----------------GDGNIRYYELTNERPYIHFLN 351 (494)
Q Consensus 307 ~----------------~~~~~v~~~~~~~~~~~l~~~g~-----------------~dg~i~~wd~~~~~~~~~~~~ 351 (494)
. ...+.-..+++++....+|+-.+ ..+.|.-.|.++|+...++..
T Consensus 355 g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~~r~~~~n~y~~slvALD~~TGk~~W~~Q~ 432 (764)
T TIGR03074 355 GNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGGDRTPADEKYSSSLVALDATTGKERWVFQT 432 (764)
T ss_pred CCCCcccCCCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccccccCCccccCcccccceEEEEeCCCCceEEEecc
Confidence 0 11112244677777777655211 235677788888887666543
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases. |
| >PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin | Back alignment and domain information |
|---|
Probab=85.02 E-value=6.4 Score=34.86 Aligned_cols=28 Identities=18% Similarity=0.317 Sum_probs=23.6
Q ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCceE
Q psy14130 227 FNRDGSRLVTTCKDKTVRVLDPRTGLVI 254 (494)
Q Consensus 227 ~~~~~~~l~s~~~d~~v~iwd~~~~~~~ 254 (494)
+..++.+|++.+.+|.+++||+.+++.+
T Consensus 18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~ 45 (219)
T PF07569_consen 18 LECNGSYLLAITSSGLLYVWNLKKGKAV 45 (219)
T ss_pred EEeCCCEEEEEeCCCeEEEEECCCCeec
Confidence 3346889999999999999999998754
|
These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus |
| >COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=84.51 E-value=24 Score=34.88 Aligned_cols=129 Identities=13% Similarity=0.134 Sum_probs=73.9
Q ss_pred EEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCC-------CCEEEEEeCCCeEEEEECCC-CeEEEEecCCCCce
Q psy14130 151 VKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTA-------ENVVASAGFDYLIILWDVGK-GEALTVIDCHPDVI 222 (494)
Q Consensus 151 v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~-------~~~l~s~s~d~~v~iwd~~~-~~~~~~~~~h~~~v 222 (494)
+.-.|++.| +.+.+..-|..- -+.|.|.. ++.|+ |-.+..|.-.|.+- |..+...+ ....+
T Consensus 492 LykmDIErG-------kvveeW~~~ddv--vVqy~p~~kf~qmt~eqtlv-GlS~~svFrIDPR~~gNKi~v~e-sKdY~ 560 (776)
T COG5167 492 LYKMDIERG-------KVVEEWDLKDDV--VVQYNPYFKFQQMTDEQTLV-GLSDYSVFRIDPRARGNKIKVVE-SKDYK 560 (776)
T ss_pred ceeeecccc-------eeeeEeecCCcc--eeecCCchhHHhcCccceEE-eecccceEEecccccCCceeeee-ehhcc
Confidence 444455555 333334434443 46666642 12344 44456666667653 32222222 22223
Q ss_pred EEEEEcC----CCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCC
Q psy14130 223 NCLSFNR----DGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEN 296 (494)
Q Consensus 223 ~~l~~~~----~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~ 296 (494)
+--.|+. ..-+++.+|..|-||+||--.-+....+++-... +..+....+|..+++++ ...+.+-|++
T Consensus 561 tKn~Fss~~tTesGyIa~as~kGDirLyDRig~rAKtalP~lG~a-Ik~idvta~Gk~ilaTC-----k~yllL~d~~ 632 (776)
T COG5167 561 TKNKFSSGMTTESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDA-IKHIDVTANGKHILATC-----KNYLLLTDVP 632 (776)
T ss_pred ccccccccccccCceEEEecCCCceeeehhhcchhhhcCcccccc-eeeeEeecCCcEEEEee-----cceEEEEecc
Confidence 3333333 3448999999999999995433333334444444 78888888888999998 6778888865
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=83.97 E-value=63 Score=34.36 Aligned_cols=179 Identities=11% Similarity=-0.019 Sum_probs=89.9
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCC-----CeEEEEECCCC--eEEEEecCCCCce
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFD-----YLIILWDVGKG--EALTVIDCHPDVI 222 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d-----~~v~iwd~~~~--~~~~~~~~h~~~v 222 (494)
+|++-|+.++.... . .+. ... ..++|.+++..++++.-.+ ..|..+++.++ +....+.......
T Consensus 154 ~l~v~d~~tg~~l~---~---~i~-~~~--~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~lgt~~~~d~lv~~e~~~~~ 224 (686)
T PRK10115 154 GIRFRNLETGNWYP---E---LLD-NVE--PSFVWANDSWTFYYVRKHPVTLLPYQVWRHTIGTPASQDELVYEEKDDTF 224 (686)
T ss_pred EEEEEECCCCCCCC---c---ccc-Ccc--eEEEEeeCCCEEEEEEecCCCCCCCEEEEEECCCChhHCeEEEeeCCCCE
Confidence 48888888773211 1 111 111 4699999986566655432 47888899887 3344444333333
Q ss_pred E-EEEEcCCCCEEEEEeC---CCeEEEEeCC--CCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCC
Q psy14130 223 N-CLSFNRDGSRLVTTCK---DKTVRVLDPR--TGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEN 296 (494)
Q Consensus 223 ~-~l~~~~~~~~l~s~~~---d~~v~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~ 296 (494)
. ++..+.++++++..+. ++.+.+++.. .+.....+ .+......... ... +.++...-.+.....|...++.
T Consensus 225 ~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~-~~ly~~tn~~~~~~~l~~~~~~ 301 (686)
T PRK10115 225 YVSLHKTTSKHYVVIHLASATTSEVLLLDAELADAEPFVFL-PRRKDHEYSLD-HYQ-HRFYLRSNRHGKNFGLYRTRVR 301 (686)
T ss_pred EEEEEEcCCCCEEEEEEECCccccEEEEECcCCCCCceEEE-ECCCCCEEEEE-eCC-CEEEEEEcCCCCCceEEEecCC
Confidence 3 3333447886665443 4678898853 34322222 23322122222 222 4444443111223344444554
Q ss_pred CCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeC
Q psy14130 297 DLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTN 342 (494)
Q Consensus 297 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~ 342 (494)
+......+........+..+.+. ++.|+++...+|.-+++-+..
T Consensus 302 ~~~~~~~l~~~~~~~~i~~~~~~--~~~l~~~~~~~g~~~l~~~~~ 345 (686)
T PRK10115 302 DEQQWEELIPPRENIMLEGFTLF--TDWLVVEERQRGLTSLRQINR 345 (686)
T ss_pred CcccCeEEECCCCCCEEEEEEEE--CCEEEEEEEeCCEEEEEEEcC
Confidence 32211122111112346666665 567778888888866665543
|
|
| >KOG1916|consensus | Back alignment and domain information |
|---|
Probab=82.63 E-value=0.97 Score=47.06 Aligned_cols=83 Identities=17% Similarity=0.161 Sum_probs=51.2
Q ss_pred ecccccccEEEEE-----------EcCCCCCEEEEEeCCCeEEEEECC-CC----eEEEEecCCCC-ceEEEEEcCCC--
Q psy14130 171 DLHGHKRRVGYIE-----------WHPTAENVVASAGFDYLIILWDVG-KG----EALTVIDCHPD-VINCLSFNRDG-- 231 (494)
Q Consensus 171 ~~~~h~~~V~~~~-----------~~p~~~~~l~s~s~d~~v~iwd~~-~~----~~~~~~~~h~~-~v~~l~~~~~~-- 231 (494)
.+.+|..++..++ .+||| +.+|++..||.++.|-+. +| .++...+.|.+ +-.|.-++.+.
T Consensus 219 l~rsHs~~~~d~a~~~~g~~~l~~lSpDG-tv~a~a~~dG~v~f~Qiyi~g~~~~rclhewkphd~~p~vC~lc~~~~~~ 297 (1283)
T KOG1916|consen 219 LFRSHSQRVTDMAFFAEGVLKLASLSPDG-TVFAWAISDGSVGFYQIYITGKIVHRCLHEWKPHDKHPRVCWLCHKQEIL 297 (1283)
T ss_pred HHHhcCCCcccHHHHhhchhhheeeCCCC-cEEEEeecCCccceeeeeeeccccHhhhhccCCCCCCCceeeeecccccc
Confidence 3456777776665 47888 788999999988888764 22 34455566663 22222233221
Q ss_pred -------CEEEEEe-CCCeEEEEeCCCCceE
Q psy14130 232 -------SRLVTTC-KDKTVRVLDPRTGLVI 254 (494)
Q Consensus 232 -------~~l~s~~-~d~~v~iwd~~~~~~~ 254 (494)
.++++++ ....+++|.....+|+
T Consensus 298 ~v~i~~w~~~Itttd~nre~k~w~~a~w~Cl 328 (1283)
T KOG1916|consen 298 VVSIGKWVLRITTTDVNREEKFWAEAPWQCL 328 (1283)
T ss_pred CCccceeEEEEecccCCcceeEeeccchhhh
Confidence 2344444 4567999988777765
|
|
| >PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=81.18 E-value=6.3 Score=23.49 Aligned_cols=30 Identities=10% Similarity=0.210 Sum_probs=20.9
Q ss_pred ccccEEEEEEcCCCCCEEEEEeCC--CeEEEE
Q psy14130 175 HKRRVGYIEWHPTAENVVASAGFD--YLIILW 204 (494)
Q Consensus 175 h~~~V~~~~~~p~~~~~l~s~s~d--~~v~iw 204 (494)
....-....|+|+|..++.++..+ |.-.||
T Consensus 7 ~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 7 SPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp SSSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred CCccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 445567899999997677777776 666665
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A .... |
| >PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes [] | Back alignment and domain information |
|---|
Probab=81.05 E-value=78 Score=33.35 Aligned_cols=113 Identities=12% Similarity=0.080 Sum_probs=70.2
Q ss_pred cEEEEEEcCC-CCCEEEEEeCCCeEEEEECCC-------C----e---------EEEEecCCCCceEEEEEc--CCCCEE
Q psy14130 178 RVGYIEWHPT-AENVVASAGFDYLIILWDVGK-------G----E---------ALTVIDCHPDVINCLSFN--RDGSRL 234 (494)
Q Consensus 178 ~V~~~~~~p~-~~~~l~s~s~d~~v~iwd~~~-------~----~---------~~~~~~~h~~~v~~l~~~--~~~~~l 234 (494)
.|+.|....- ++.+|+.|.+||.|.+|.+++ . . +...+. -...+++++++ ...++|
T Consensus 102 tIN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~-v~~SaWGLdIh~~~~~rlI 180 (717)
T PF08728_consen 102 TINFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR-VGASAWGLDIHDYKKSRLI 180 (717)
T ss_pred eeeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEee-cCCceeEEEEEecCcceEE
Confidence 3555544332 235899999999999997621 0 0 111222 34578999998 788899
Q ss_pred EEEeCCCeEEEEeCCCC--ce-EEEeeecCCCCceEEEEECCC----C-eEEEEEecCCCCceEEEEeC
Q psy14130 235 VTTCKDKTVRVLDPRTG--LV-ISQGVCHPGTRSSKAVFIGDT----G-RIVTTGFSRHSDRQVGLWDE 295 (494)
Q Consensus 235 ~s~~~d~~v~iwd~~~~--~~-~~~~~~~~~~~~~~~~~~~~~----~-~l~~~g~~~~~d~~i~iwd~ 295 (494)
|.++....|.||-.... +. ...-..+... +-++.|.++. + ..+++. +-.|.+.+|++
T Consensus 181 AVSsNs~~VTVFaf~l~~~r~~~~~s~~~~hN-IP~VSFl~~~~d~~G~v~v~a~---dI~G~v~~~~I 245 (717)
T PF08728_consen 181 AVSSNSQEVTVFAFALVDERFYHVPSHQHSHN-IPNVSFLDDDLDPNGHVKVVAT---DISGEVWTFKI 245 (717)
T ss_pred EEecCCceEEEEEEeccccccccccccccccC-CCeeEeecCCCCCccceEEEEE---eccCcEEEEEE
Confidence 99988888888755432 11 1110112222 6788887764 2 255555 57888888887
|
RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance []. |
| >PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides | Back alignment and domain information |
|---|
Probab=80.71 E-value=11 Score=27.64 Aligned_cols=32 Identities=19% Similarity=0.096 Sum_probs=27.5
Q ss_pred CceEEeEEeCCCCEEEEEEeCCCcEEEEEeeC
Q psy14130 311 SGVLFPYYDHDTRILFLAGKGDGNIRYYELTN 342 (494)
Q Consensus 311 ~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~ 342 (494)
.....+.++|+++.|+++....+.|++|+.+.
T Consensus 54 ~~aNGI~~s~~~k~lyVa~~~~~~I~vy~~~~ 85 (86)
T PF01731_consen 54 SFANGIAISPDKKYLYVASSLAHSIHVYKRHK 85 (86)
T ss_pred CCCceEEEcCCCCEEEEEeccCCeEEEEEecC
Confidence 44566789999999999999999999998764
|
The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity |
| >PLN00033 photosystem II stability/assembly factor; Provisional | Back alignment and domain information |
|---|
Probab=80.50 E-value=60 Score=31.75 Aligned_cols=147 Identities=13% Similarity=0.103 Sum_probs=78.4
Q ss_pred eEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCc
Q psy14130 222 INCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTP 301 (494)
Q Consensus 222 v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~ 301 (494)
...+..+++|.+++.+..-..++-||-.... -..........+..+.+.++ +.++.++ ..|.+..= ...+..-
T Consensus 241 f~~v~~~~dG~~~~vg~~G~~~~s~d~G~~~-W~~~~~~~~~~l~~v~~~~d-g~l~l~g----~~G~l~~S-~d~G~~~ 313 (398)
T PLN00033 241 FSTVNRSPDGDYVAVSSRGNFYLTWEPGQPY-WQPHNRASARRIQNMGWRAD-GGLWLLT----RGGGLYVS-KGTGLTE 313 (398)
T ss_pred eeeEEEcCCCCEEEEECCccEEEecCCCCcc-eEEecCCCccceeeeeEcCC-CCEEEEe----CCceEEEe-cCCCCcc
Confidence 4456677788777777655545555543211 12222233333678888777 5666666 46665442 2222110
Q ss_pred --eeEeeec---CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec-c
Q psy14130 302 --LALETVD---SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ-C 375 (494)
Q Consensus 302 --~~~~~~~---~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~-~ 375 (494)
..+.... ....+..+.|.+++..+ ++| ..|.+... ...++........-........+.|.+++...+.+ +
T Consensus 314 ~~~~f~~~~~~~~~~~l~~v~~~~d~~~~-a~G-~~G~v~~s-~D~G~tW~~~~~~~~~~~~ly~v~f~~~~~g~~~G~~ 390 (398)
T PLN00033 314 EDFDFEEADIKSRGFGILDVGYRSKKEAW-AAG-GSGILLRS-TDGGKSWKRDKGADNIAANLYSVKFFDDKKGFVLGND 390 (398)
T ss_pred cccceeecccCCCCcceEEEEEcCCCcEE-EEE-CCCcEEEe-CCCCcceeEccccCCCCcceeEEEEcCCCceEEEeCC
Confidence 0122221 12357888898887765 655 67766554 34555432221111223567899998866666665 5
Q ss_pred cee
Q psy14130 376 EIF 378 (494)
Q Consensus 376 ~~~ 378 (494)
+.+
T Consensus 391 G~i 393 (398)
T PLN00033 391 GVL 393 (398)
T ss_pred cEE
Confidence 543
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 494 | ||||
| 2b4e_A | 402 | Crystal Structure Of Murine Coronin-1: Monoclinic F | 2e-99 | ||
| 2aq5_A | 402 | Crystal Structure Of Murine Coronin-1 Length = 402 | 6e-99 | ||
| 2cnx_A | 315 | Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2. | 7e-08 | ||
| 2xl2_A | 334 | Wdr5 In Complex With An Rbbp5 Peptide Recruited To | 9e-08 | ||
| 2xl2_A | 334 | Wdr5 In Complex With An Rbbp5 Peptide Recruited To | 2e-07 | ||
| 2gnq_A | 336 | Structure Of Wdr5 Length = 336 | 1e-07 | ||
| 2gnq_A | 336 | Structure Of Wdr5 Length = 336 | 2e-07 | ||
| 3emh_A | 318 | Structural Basis Of Wdr5-Mll Interaction Length = 3 | 1e-07 | ||
| 3emh_A | 318 | Structural Basis Of Wdr5-Mll Interaction Length = 3 | 2e-07 | ||
| 2h9l_A | 329 | Wdr5delta23 Length = 329 | 1e-07 | ||
| 2h9l_A | 329 | Wdr5delta23 Length = 329 | 3e-07 | ||
| 3n0e_A | 315 | Crystal Structure Of Wdr5 Mutant (W330y) Length = 3 | 1e-07 | ||
| 3n0e_A | 315 | Crystal Structure Of Wdr5 Mutant (W330y) Length = 3 | 4e-07 | ||
| 3n0d_A | 315 | Crystal Structure Of Wdr5 Mutant (W330f) Length = 3 | 1e-07 | ||
| 3n0d_A | 315 | Crystal Structure Of Wdr5 Mutant (W330f) Length = 3 | 4e-07 | ||
| 3psl_A | 318 | Fine-Tuning The Stimulation Of Mll1 Methyltransfera | 1e-07 | ||
| 3psl_A | 318 | Fine-Tuning The Stimulation Of Mll1 Methyltransfera | 3e-07 | ||
| 2h68_A | 312 | Histone H3 Recognition And Presentation By The Wdr5 | 1e-07 | ||
| 2h68_A | 312 | Histone H3 Recognition And Presentation By The Wdr5 | 2e-07 | ||
| 2co0_A | 315 | Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs | 1e-07 | ||
| 2h9m_A | 313 | Wdr5 In Complex With Unmodified H3k4 Peptide Length | 1e-07 | ||
| 2h9m_A | 313 | Wdr5 In Complex With Unmodified H3k4 Peptide Length | 3e-07 | ||
| 2h13_A | 317 | Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length | 1e-07 | ||
| 2h13_A | 317 | Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length | 3e-07 | ||
| 2g99_A | 308 | Structural Basis For The Specific Recognition Of Me | 1e-07 | ||
| 2g99_A | 308 | Structural Basis For The Specific Recognition Of Me | 2e-07 | ||
| 4a7j_A | 318 | Symmetric Dimethylation Of H3 Arginine 2 Is A Novel | 1e-07 | ||
| 4a7j_A | 318 | Symmetric Dimethylation Of H3 Arginine 2 Is A Novel | 3e-07 | ||
| 3mxx_A | 315 | Crystal Structure Of Wdr5 Mutant (S62a) Length = 31 | 1e-07 | ||
| 3mxx_A | 315 | Crystal Structure Of Wdr5 Mutant (S62a) Length = 31 | 5e-07 | ||
| 2g9a_A | 311 | Structural Basis For The Specific Recognition Of Me | 1e-07 | ||
| 2g9a_A | 311 | Structural Basis For The Specific Recognition Of Me | 3e-07 | ||
| 3smr_A | 312 | Crystal Structure Of Human Wd Repeat Domain 5 With | 1e-07 | ||
| 3smr_A | 312 | Crystal Structure Of Human Wd Repeat Domain 5 With | 3e-07 | ||
| 1erj_A | 393 | Crystal Structure Of The C-Terminal Wd40 Domain Of | 2e-06 | ||
| 1p22_A | 435 | Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex | 7e-06 | ||
| 3cfs_B | 414 | Structural Basis Of The Interaction Of Rbap46RBAP48 | 2e-05 | ||
| 3cfv_B | 414 | Structural Basis Of The Interaction Of Rbap46RBAP48 | 4e-05 | ||
| 1nex_B | 464 | Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Comp | 5e-05 | ||
| 3mks_B | 464 | Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH | 7e-05 | ||
| 2ymu_A | 577 | Structure Of A Highly Repetitive Propeller Structur | 1e-04 | ||
| 1vyh_C | 410 | Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | 2e-04 | ||
| 3sfz_A | 1249 | Crystal Structure Of Full-Length Murine Apaf-1 Leng | 2e-04 | ||
| 3shf_A | 1256 | Crystal Structure Of The R265s Mutant Of Full-Lengt | 2e-04 | ||
| 2ovp_B | 445 | Structure Of The Skp1-Fbw7 Complex Length = 445 | 4e-04 | ||
| 4e54_B | 435 | Damaged Dna Induced Uv-Damaged Dna-Binding Protein | 4e-04 | ||
| 4e5z_B | 436 | Damaged Dna Induced Uv-Damaged Dna-Binding Protein | 5e-04 | ||
| 3ei4_B | 436 | Structure Of The Hsddb1-Hsddb2 Complex Length = 436 | 5e-04 | ||
| 3zey_7 | 318 | High-resolution Cryo-electron Microscopy Structure | 5e-04 | ||
| 4i79_A | 399 | Crystal Structure Of Human Nup43 Length = 399 | 9e-04 |
| >pdb|2B4E|A Chain A, Crystal Structure Of Murine Coronin-1: Monoclinic Form Length = 402 | Back alignment and structure |
|
| >pdb|2AQ5|A Chain A, Crystal Structure Of Murine Coronin-1 Length = 402 | Back alignment and structure |
|
| >pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315 | Back alignment and structure |
|
| >pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334 | Back alignment and structure |
|
| >pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334 | Back alignment and structure |
|
| >pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336 | Back alignment and structure |
|
| >pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336 | Back alignment and structure |
|
| >pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318 | Back alignment and structure |
|
| >pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318 | Back alignment and structure |
|
| >pdb|2H9L|A Chain A, Wdr5delta23 Length = 329 | Back alignment and structure |
|
| >pdb|2H9L|A Chain A, Wdr5delta23 Length = 329 | Back alignment and structure |
|
| >pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315 | Back alignment and structure |
|
| >pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315 | Back alignment and structure |
|
| >pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315 | Back alignment and structure |
|
| >pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315 | Back alignment and structure |
|
| >pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318 | Back alignment and structure |
|
| >pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318 | Back alignment and structure |
|
| >pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312 | Back alignment and structure |
|
| >pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312 | Back alignment and structure |
|
| >pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315 | Back alignment and structure |
|
| >pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313 | Back alignment and structure |
|
| >pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313 | Back alignment and structure |
|
| >pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317 | Back alignment and structure |
|
| >pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317 | Back alignment and structure |
|
| >pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308 | Back alignment and structure |
|
| >pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308 | Back alignment and structure |
|
| >pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318 | Back alignment and structure |
|
| >pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318 | Back alignment and structure |
|
| >pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315 | Back alignment and structure |
|
| >pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315 | Back alignment and structure |
|
| >pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311 | Back alignment and structure |
|
| >pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311 | Back alignment and structure |
|
| >pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312 | Back alignment and structure |
|
| >pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312 | Back alignment and structure |
|
| >pdb|1ERJ|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1 Length = 393 | Back alignment and structure |
|
| >pdb|1P22|A Chain A, Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex: Destruction Motif Binding And Lysine Specificity On The Scfbeta-Trcp1 Ubiquitin Ligase Length = 435 | Back alignment and structure |
|
| >pdb|3CFS|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH Histone H4 Length = 414 | Back alignment and structure |
|
| >pdb|3CFV|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH Histone H4 Length = 414 | Back alignment and structure |
|
| >pdb|1NEX|B Chain B, Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Complex Length = 464 | Back alignment and structure |
|
| >pdb|3MKS|B Chain B, Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH AN ALLOSTERIC Inhibitor Scf-I2 Length = 464 | Back alignment and structure |
|
| >pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577 | Back alignment and structure |
|
| >pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | Back alignment and structure |
|
| >pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249 | Back alignment and structure |
|
| >pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256 | Back alignment and structure |
|
| >pdb|2OVP|B Chain B, Structure Of The Skp1-Fbw7 Complex Length = 445 | Back alignment and structure |
|
| >pdb|4E54|B Chain B, Damaged Dna Induced Uv-Damaged Dna-Binding Protein (Uv-Ddb) Dimerization And Its Roles In Chromatinized Dna Repair Length = 435 | Back alignment and structure |
|
| >pdb|4E5Z|B Chain B, Damaged Dna Induced Uv-Damaged Dna-Binding Protein (Uv-Ddb) Dimerization And Its Roles In Chromatinized Dna Repair Length = 436 | Back alignment and structure |
|
| >pdb|3EI4|B Chain B, Structure Of The Hsddb1-Hsddb2 Complex Length = 436 | Back alignment and structure |
|
| >pdb|3ZEY|7 Chain 7, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 318 | Back alignment and structure |
|
| >pdb|4I79|A Chain A, Crystal Structure Of Human Nup43 Length = 399 | Back alignment and structure |
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 494 | |||
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 100.0 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 100.0 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 100.0 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 100.0 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 100.0 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 100.0 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 100.0 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 100.0 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 100.0 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 100.0 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 100.0 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 100.0 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 100.0 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 100.0 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 100.0 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 100.0 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 100.0 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 100.0 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 100.0 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 100.0 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 100.0 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 100.0 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 100.0 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 100.0 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 100.0 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 100.0 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 100.0 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 100.0 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 100.0 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 100.0 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 100.0 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 100.0 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 100.0 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 100.0 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 100.0 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 100.0 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 100.0 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 100.0 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 100.0 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 100.0 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 100.0 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 100.0 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 100.0 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 100.0 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 100.0 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 100.0 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 100.0 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 100.0 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 100.0 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 100.0 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 100.0 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 100.0 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 100.0 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 100.0 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 100.0 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 100.0 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 100.0 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 100.0 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 100.0 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 99.98 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 99.98 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 99.98 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 99.98 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 99.98 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 99.97 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 99.97 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 99.97 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 99.97 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 99.97 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 99.97 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 99.97 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 99.97 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 99.97 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 99.97 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 99.97 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 99.97 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 99.97 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 99.97 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 99.97 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 99.97 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 99.97 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 99.97 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 99.97 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 99.97 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 99.97 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 99.97 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 99.97 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 99.97 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 99.97 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 99.97 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 99.96 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 99.96 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 99.96 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 99.96 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 99.96 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 99.96 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 99.96 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 99.96 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 99.96 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 99.96 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 99.96 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 99.96 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 99.96 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 99.96 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 99.96 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 99.96 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 99.96 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 99.95 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 99.95 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.95 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 99.95 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 99.95 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 99.95 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 99.95 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 99.95 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.95 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.94 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 99.94 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 99.94 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 99.94 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 99.94 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 99.94 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 99.93 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 99.93 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.93 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 99.92 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.92 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 99.89 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 99.89 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.88 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.88 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.87 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 99.87 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 99.87 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.87 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.86 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 99.85 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.85 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 99.83 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.83 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.83 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.83 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.83 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.83 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.82 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 99.82 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.8 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 99.8 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 99.8 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.77 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 99.77 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.76 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 99.75 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 99.75 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 99.75 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.73 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 99.73 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 99.72 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 99.71 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.7 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 99.7 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 99.69 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 99.66 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.64 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.64 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.64 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.64 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.63 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 99.62 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 99.62 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 99.56 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 99.56 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 99.56 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.54 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 99.53 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 99.53 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.53 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 99.51 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 99.5 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 99.5 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 99.48 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 99.47 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 99.47 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 99.47 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 99.45 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 99.45 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 99.43 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.43 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 99.4 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.4 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 99.4 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 99.39 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 99.37 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 99.36 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.36 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 99.36 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 99.35 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 99.34 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 99.33 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.33 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 99.32 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 99.3 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 99.2 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 99.19 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 99.19 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 99.19 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 99.16 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.16 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 99.15 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.12 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 99.09 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 99.07 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 99.07 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 99.07 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 99.06 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.05 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 99.03 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 99.01 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 98.99 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 98.98 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 98.95 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 98.94 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 98.94 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 98.93 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 98.93 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 98.89 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 98.88 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 98.88 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 98.88 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 98.87 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 98.83 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 98.82 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 98.81 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 98.79 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 98.77 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 98.74 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 98.7 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 98.7 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 98.68 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 98.67 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 98.67 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 98.59 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 98.59 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 98.59 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 98.58 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 98.56 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 98.53 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 98.5 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 98.47 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 98.43 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 98.43 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 98.43 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 98.36 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 98.36 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 98.35 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 98.34 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 98.34 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 98.31 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 98.29 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 98.29 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 98.28 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 98.25 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 98.25 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 98.23 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 98.23 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 98.22 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 98.21 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 98.21 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 98.13 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 98.12 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 98.11 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 98.1 | |
| 4a0p_A | 628 | LRP6, LRP-6, low-density lipoprotein receptor-rela | 98.06 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 98.05 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 98.01 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 97.97 | |
| 3s94_A | 619 | LRP-6, low-density lipoprotein receptor-related pr | 97.95 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 97.91 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 97.91 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 97.91 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 97.85 | |
| 2p9w_A | 334 | MAL S 1 allergenic protein; beta propeller; 1.35A | 97.84 | |
| 3v9f_A | 781 | Two-component system sensor histidine kinase/RESP | 97.84 | |
| 3s94_A | 619 | LRP-6, low-density lipoprotein receptor-related pr | 97.84 | |
| 3amr_A | 355 | 3-phytase; beta-propeller, phytate, MYO-inositol h | 97.82 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 97.81 | |
| 2g8s_A | 353 | Glucose/sorbosone dehydrogenases; bladed beta-prop | 97.81 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 97.77 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 97.76 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 97.72 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 97.67 | |
| 2ism_A | 352 | Putative oxidoreductase; BL41XU spring-8, bladed b | 97.66 | |
| 3sre_A | 355 | PON1, serum paraoxonase; directed evolution, 6-bla | 97.64 | |
| 3ei3_A | 1158 | DNA damage-binding protein 1; UV-damage, DDB, nucl | 97.62 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 97.58 | |
| 3a9g_A | 354 | Putative uncharacterized protein; PQQ dependent de | 97.54 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 97.53 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 97.53 | |
| 3v9f_A | 781 | Two-component system sensor histidine kinase/RESP | 97.47 | |
| 2p9w_A | 334 | MAL S 1 allergenic protein; beta propeller; 1.35A | 97.45 | |
| 4a0p_A | 628 | LRP6, LRP-6, low-density lipoprotein receptor-rela | 97.42 | |
| 3amr_A | 355 | 3-phytase; beta-propeller, phytate, MYO-inositol h | 97.4 | |
| 2xbg_A | 327 | YCF48-like protein; photosynthesis, photosystem II | 97.32 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 97.28 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 97.18 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 97.16 | |
| 2ism_A | 352 | Putative oxidoreductase; BL41XU spring-8, bladed b | 96.83 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 96.81 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 96.67 | |
| 3sre_A | 355 | PON1, serum paraoxonase; directed evolution, 6-bla | 96.66 | |
| 3das_A | 347 | Putative oxidoreductase; aldose sugar dehydrogenas | 96.57 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 96.55 | |
| 2xzh_A | 365 | Clathrin heavy chain 1; endocytosis, endocytosis i | 96.52 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 96.38 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 96.38 | |
| 2xbg_A | 327 | YCF48-like protein; photosynthesis, photosystem II | 96.35 | |
| 3a9g_A | 354 | Putative uncharacterized protein; PQQ dependent de | 96.33 | |
| 2xzh_A | 365 | Clathrin heavy chain 1; endocytosis, endocytosis i | 96.15 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 96.09 | |
| 3pbp_A | 452 | Nucleoporin NUP82; beta-propeller, mRNA export, mR | 96.08 | |
| 1bpo_A | 494 | Protein (clathrin); clathrin endocytosis beta-prop | 96.01 | |
| 1cru_A | 454 | Protein (soluble quinoprotein glucose dehydrogena; | 95.95 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 95.86 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 95.75 | |
| 3pbp_A | 452 | Nucleoporin NUP82; beta-propeller, mRNA export, mR | 95.45 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 95.44 | |
| 1cru_A | 454 | Protein (soluble quinoprotein glucose dehydrogena; | 95.31 | |
| 1bpo_A | 494 | Protein (clathrin); clathrin endocytosis beta-prop | 94.93 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 94.88 | |
| 1tl2_A | 236 | L10, protein (tachylectin-2); animal lectin, horse | 94.28 | |
| 2g8s_A | 353 | Glucose/sorbosone dehydrogenases; bladed beta-prop | 94.25 | |
| 1tl2_A | 236 | L10, protein (tachylectin-2); animal lectin, horse | 94.25 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 94.22 | |
| 4gq2_M | 950 | Nucleoporin NUP120; beta propeller alpha helical, | 94.16 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 94.1 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 93.88 | |
| 3das_A | 347 | Putative oxidoreductase; aldose sugar dehydrogenas | 93.62 | |
| 3ei3_A | 1158 | DNA damage-binding protein 1; UV-damage, DDB, nucl | 93.36 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 93.06 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 92.7 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 92.6 | |
| 3s25_A | 302 | Hypothetical 7-bladed beta-propeller-like protein; | 89.39 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 89.05 | |
| 3s25_A | 302 | Hypothetical 7-bladed beta-propeller-like protein; | 88.93 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 87.97 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 87.51 | |
| 2wg3_C | 463 | Hedgehog-interacting protein; lipoprotein, develop | 85.03 | |
| 2be1_A | 339 | Serine/threonine-protein kinase/endoribonuclease; | 83.92 |
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-49 Score=388.11 Aligned_cols=353 Identities=53% Similarity=1.014 Sum_probs=312.9
Q ss_pred ccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEc-------------------
Q psy14130 88 RGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPI------------------- 148 (494)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~------------------- 148 (494)
+.++.+||+|+++...+.+.++.++++....++..++++++++.++++.++++|.+.+...
T Consensus 4 ~~~~~sk~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~ 83 (402)
T 2aq5_A 4 QVVRSSKFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAP 83 (402)
T ss_dssp ----CCTTTTCEEEECCGGGSEESCCBCCCCCSSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSC
T ss_pred cccCCCCCccccCcCCChhhcEecceeecCccCCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCC
Confidence 4568999999999999999999999999999999999999999988876655555555543
Q ss_pred --------------------CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCC
Q psy14130 149 --------------------HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGK 208 (494)
Q Consensus 149 --------------------~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~ 208 (494)
+.|+|||+.++........++..+.+|...|.+++|+|++.++|++|+.|+.|++||+.+
T Consensus 84 V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~ 163 (402)
T 2aq5_A 84 VLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGT 163 (402)
T ss_dssp EEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTT
T ss_pred EEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCC
Confidence 229999999886655555677889999999999999999867999999999999999999
Q ss_pred CeEEEEe--cCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEe-eecCCCCceEEEEECCCCeEEEEEecCC
Q psy14130 209 GEALTVI--DCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQG-VCHPGTRSSKAVFIGDTGRIVTTGFSRH 285 (494)
Q Consensus 209 ~~~~~~~--~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~g~~~~ 285 (494)
++.+..+ .+|.+.|++++|+|++++|++++.|+.|++||+++++.+..+ ..|.+..+..+.|+++ +.++++|++++
T Consensus 164 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~g~~~~ 242 (402)
T 2aq5_A 164 GAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSE-GKILTTGFSRM 242 (402)
T ss_dssp TEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECST-TEEEEEEECTT
T ss_pred CCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCC-CcEEEEeccCC
Confidence 9999999 889999999999999999999999999999999999999888 7888766889999998 78888887777
Q ss_pred CCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEe
Q psy14130 286 SDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFM 365 (494)
Q Consensus 286 ~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~ 365 (494)
.|+.|++||+++...+......++...+.+++|+|+++.|+++|+.||.|++||+.++++....+..+.+..++.+++|+
T Consensus 243 ~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~s 322 (402)
T 2aq5_A 243 SERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYM 322 (402)
T ss_dssp CCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEEC
T ss_pred CCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEe
Confidence 89999999999877666666667778899999999999997888899999999999998755566666677899999999
Q ss_pred cCCceeeeccceeEEEEeeCCCCeEEEeEEEeeCCCCCCCCCCCCCCCCCCcccCHhhhcCCCCCCCeEeccCCCCcc
Q psy14130 366 PKRGCDVTQCEIFRFFKLHTTRNMCEPISMIVPRKSDQFQDDLYPDTAAPVPALSAADWYKGVNRPPVLMSMRTGVNV 443 (494)
Q Consensus 366 p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pr~~~~~~~~~~~~~~~~~~~~~~~~w~~g~~~~~~~~sl~~~~~~ 443 (494)
|++.+++++++.+++|++.. +.++|+.+.+||+++.||.++||++....|+++++||+.|.+.+|.++||+|++.+
T Consensus 323 p~~~~~~s~~~~~~~~~l~~--~~~~~i~~~~pr~~~~f~~d~~p~~~~~~~~~sa~~w~~g~~~~~~~~s~~~~~~~ 398 (402)
T 2aq5_A 323 PKRGLEVNKCEIARFYKLHE--RKCEPIAMTVPRKSDLFQEDLYPPTAGPDPALTAEEWLGGRDAGPLLISLKDGYVP 398 (402)
T ss_dssp CGGGSCGGGTEEEEEEEEET--TEEEEEEEECCCCCSSCCTTTCCCEECSSCSBCHHHHHTTCCCCCCEECCSTTCCC
T ss_pred cccccceecceeEEEEEcCC--CcEEEEEEEcccchhhcccccCCCCCCCCcccCHHHHhCCCCCCceEEecCCcccC
Confidence 99999999999999999998 47999999999999999999999999999999999999999999999999998863
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-39 Score=317.93 Aligned_cols=217 Identities=21% Similarity=0.310 Sum_probs=190.6
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
++|+|||+.+. +.+..+.+|...|.+++|+|++ .+|++|+.|++|++||++++.++..+.+|...|.++.|+
T Consensus 172 ~~i~iwd~~~~-------~~~~~~~~h~~~V~~v~~~p~~-~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~ 243 (410)
T 1vyh_C 172 MTIKLWDFQGF-------ECIRTMHGHDHNVSSVSIMPNG-DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243 (410)
T ss_dssp SCCCEEETTSS-------CEEECCCCCSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEC
T ss_pred CeEEEEeCCCC-------ceeEEEcCCCCCEEEEEEeCCC-CEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEEC
Confidence 47999999887 6778889999999999999998 799999999999999999999999999999999999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCC-------------------CeEEEEEecCCCCce
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDT-------------------GRIVTTGFSRHSDRQ 289 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~l~~~g~~~~~d~~ 289 (494)
|++.+|++|+.|++|++||++++++...+..|... +.++.|+|+. +.++++| +.|+.
T Consensus 244 ~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sg---s~D~~ 319 (410)
T 1vyh_C 244 QDGTLIASCSNDQTVRVWVVATKECKAELREHRHV-VECISWAPESSYSSISEATGSETKKSGKPGPFLLSG---SRDKT 319 (410)
T ss_dssp TTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSC-EEEEEECCSCGGGGGGGCCSCC-------CCEEEEE---ETTSE
T ss_pred CCCCEEEEEcCCCeEEEEECCCCceeeEecCCCce-EEEEEEcCcccccchhhhccccccccCCCCCEEEEE---eCCCe
Confidence 99999999999999999999999999999999887 9999999863 4567777 69999
Q ss_pred EEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCc
Q psy14130 290 VGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRG 369 (494)
Q Consensus 290 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ 369 (494)
|++||+++......+ ..|...|.+++|+|++++| ++|+.||.|++||+.+++.+..+. .+...|.+++|+|++.
T Consensus 320 i~iwd~~~~~~~~~~--~~h~~~v~~v~~~~~g~~l-~s~s~D~~i~vwd~~~~~~~~~~~---~h~~~v~~l~~~~~~~ 393 (410)
T 1vyh_C 320 IKMWDVSTGMCLMTL--VGHDNWVRGVLFHSGGKFI-LSCADDKTLRVWDYKNKRCMKTLN---AHEHFVTSLDFHKTAP 393 (410)
T ss_dssp EEEEETTTTEEEEEE--ECCSSCEEEEEECSSSSCE-EEEETTTEEEEECCTTSCCCEEEE---CCSSCEEEEEECSSSS
T ss_pred EEEEECCCCceEEEE--ECCCCcEEEEEEcCCCCEE-EEEeCCCeEEEEECCCCceEEEEc---CCCCcEEEEEEcCCCC
Confidence 999999876543322 3466789999999999999 899999999999999988755442 2357899999999999
Q ss_pred eeeec--cceeEEEEe
Q psy14130 370 CDVTQ--CEIFRFFKL 383 (494)
Q Consensus 370 ~~~~~--~~~~~~~~l 383 (494)
+++++ |+.+++|++
T Consensus 394 ~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 394 YVVTGSVDQTVKVWEC 409 (410)
T ss_dssp CEEEEETTSEEEEEC-
T ss_pred EEEEEeCCCcEEEEeC
Confidence 88875 999999985
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-39 Score=304.46 Aligned_cols=216 Identities=15% Similarity=0.233 Sum_probs=190.6
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.|++||+.++ +.+..+.+|...+.+++|+|++ .+|++|+.|+.|++||+.+++....+..|...|.+++|+
T Consensus 102 ~~i~lWd~~~~-------~~~~~~~~~~~~~~~~~~spdg-~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~s 173 (321)
T 3ow8_A 102 AHIRLWDLENG-------KQIKSIDAGPVDAWTLAFSPDS-QYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYS 173 (321)
T ss_dssp SEEEEEETTTT-------EEEEEEECCTTCCCCEEECTTS-SEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEEC
T ss_pred CcEEEEECCCC-------CEEEEEeCCCccEEEEEECCCC-CEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEEC
Confidence 37999999988 6777888899999999999998 799999999999999999999999999999999999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD 308 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~ 308 (494)
|+|++|++|+.|+.|++||+++++.+..+.+|... +..++|+|+ +.++++| +.|+.|++||+++...... ...
T Consensus 174 pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~-v~~l~~spd-~~~l~s~---s~dg~i~iwd~~~~~~~~~--~~~ 246 (321)
T 3ow8_A 174 PDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMP-IRSLTFSPD-SQLLVTA---SDDGYIKIYDVQHANLAGT--LSG 246 (321)
T ss_dssp TTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC-CCEEEECTT-SCEEEEE---CTTSCEEEEETTTCCEEEE--ECC
T ss_pred CCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCc-eeEEEEcCC-CCEEEEE---cCCCeEEEEECCCcceeEE--EcC
Confidence 99999999999999999999999999999999887 999999998 5666777 6999999999987543222 234
Q ss_pred CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEe
Q psy14130 309 SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKL 383 (494)
Q Consensus 309 ~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l 383 (494)
|...|.+++|+|++++| ++|+.|+.|++||+.+++++..+. .+...|.+++|+|++..++++ |+.+++|++
T Consensus 247 h~~~v~~~~~sp~~~~l-~s~s~D~~v~iwd~~~~~~~~~~~---~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 247 HASWVLNVAFCPDDTHF-VSSSSDKSVKVWDVGTRTCVHTFF---DHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp CSSCEEEEEECTTSSEE-EEEETTSCEEEEETTTTEEEEEEC---CCSSCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred CCCceEEEEECCCCCEE-EEEeCCCcEEEEeCCCCEEEEEEc---CCCCcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 66789999999999998 899999999999999988755543 246789999999999888774 899999985
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-39 Score=305.95 Aligned_cols=220 Identities=16% Similarity=0.212 Sum_probs=185.4
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.|++|++.+.... ......+.+|...|.++.|++++ .+++++.|++|++||+.+++.+..+.+|.+.|.+++|+
T Consensus 119 ~~v~iw~~~~~~~~---~~~~~~~~~h~~~v~~~~~~~~~--~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~ 193 (340)
T 1got_B 119 NICSIYNLKTREGN---VRVSRELAGHTGYLSCCRFLDDN--QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLA 193 (340)
T ss_dssp CEEEEEETTTCSBS---CEEEEEEECCSSCEEEEEEEETT--EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred CeEEEEECccCCCc---ceeEEEecCCCccEEEEEECCCC--cEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEEC
Confidence 36999999875321 13456788999999999999985 58999999999999999999999999999999999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD 308 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~ 308 (494)
|++++|++|+.|+.|++||+++++++..+.+|... +..++|+|++ .++++| +.|+.|++||+++...........
T Consensus 194 ~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~-v~~v~~~p~~-~~l~s~---s~d~~v~iwd~~~~~~~~~~~~~~ 268 (340)
T 1got_B 194 PDTRLFVSGACDASAKLWDVREGMCRQTFTGHESD-INAICFFPNG-NAFATG---SDDATCRLFDLRADQELMTYSHDN 268 (340)
T ss_dssp TTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSC-EEEEEECTTS-SEEEEE---ETTSCEEEEETTTTEEEEEECCTT
T ss_pred CCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCC-EEEEEEcCCC-CEEEEE---cCCCcEEEEECCCCcEEEEEccCC
Confidence 99999999999999999999999999999999887 9999999985 455555 599999999998754332222112
Q ss_pred CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEE
Q psy14130 309 SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFK 382 (494)
Q Consensus 309 ~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~ 382 (494)
....+.+++|+|++++| ++|+.||.|++||+.+++....+ .. +..+|.+++|+|++..++++ |+.+++|+
T Consensus 269 ~~~~v~~~~~s~~g~~l-~~g~~d~~i~vwd~~~~~~~~~~-~~--h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 269 IICGITSVSFSKSGRLL-LAGYDDFNCNVWDALKADRAGVL-AG--HDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp CCSCEEEEEECTTSSEE-EEEETTSEEEEEETTTCCEEEEE-EC--CSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred cccceEEEEECCCCCEE-EEECCCCeEEEEEcccCcEeeEe-ec--CCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 23479999999999999 89999999999999988765443 22 46789999999999988875 89999995
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-38 Score=305.49 Aligned_cols=290 Identities=17% Similarity=0.168 Sum_probs=224.9
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 82 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~ 82 (494)
+||.++|++++|+| ++++|+|||.||+|+ +|+....+... .+
T Consensus 61 ~gH~~~V~~~~~s~-d~~~l~s~s~Dg~v~-vWd~~~~~~~~--~~---------------------------------- 102 (354)
T 2pbi_B 61 KGHGNKVLCMDWCK-DKRRIVSSSQDGKVI-VWDSFTTNKEH--AV---------------------------------- 102 (354)
T ss_dssp ECCSSCEEEEEECT-TSSEEEEEETTSEEE-EEETTTCCEEE--EE----------------------------------
T ss_pred cCCCCeEEEEEECC-CCCEEEEEeCCCeEE-EEECCCCCcce--EE----------------------------------
Confidence 59999999999999 899999999999999 88642211000 00
Q ss_pred eccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCC
Q psy14130 83 PIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLS 162 (494)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~ 162 (494)
. ........+.++|....++..+ .+ +.+++|++......
T Consensus 103 ------------------------------~--~~~~~v~~~~~sp~g~~lasg~-~d--------~~i~v~~~~~~~~~ 141 (354)
T 2pbi_B 103 ------------------------------T--MPCTWVMACAYAPSGCAIACGG-LD--------NKCSVYPLTFDKNE 141 (354)
T ss_dssp ------------------------------E--CSSSCCCEEEECTTSSEEEEES-TT--------SEEEEEECCCCTTC
T ss_pred ------------------------------e--cCCCCEEEEEECCCCCEEEEee-CC--------CCEEEEEEeccccc
Confidence 0 0001223344444332333222 22 36999998765322
Q ss_pred CCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcC--CCCEEEEEeCC
Q psy14130 163 GNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNR--DGSRLVTTCKD 240 (494)
Q Consensus 163 ~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~--~~~~l~s~~~d 240 (494)
.. ......+.+|...|.+++|+|++ ..|++++.|++|++||+++++.+..+.+|...|.+++|+| ++++|++|+.|
T Consensus 142 ~~-~~~~~~~~~h~~~v~~~~~~~~~-~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~D 219 (354)
T 2pbi_B 142 NM-AAKKKSVAMHTNYLSACSFTNSD-MQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCD 219 (354)
T ss_dssp CS-GGGCEEEEECSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETT
T ss_pred cc-cccceeeeccCCcEEEEEEeCCC-CEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCC
Confidence 21 24456778899999999999998 7999999999999999999999999999999999999988 57899999999
Q ss_pred CeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeC
Q psy14130 241 KTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDH 320 (494)
Q Consensus 241 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~ 320 (494)
++|++||+++++++..+..|... +..++|+|++ .++++| +.|++|++||++................+.+++|+|
T Consensus 220 g~v~~wd~~~~~~~~~~~~h~~~-v~~v~~~p~~-~~l~s~---s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~ 294 (354)
T 2pbi_B 220 KKAMVWDMRSGQCVQAFETHESD-VNSVRYYPSG-DAFASG---SDDATCRLYDLRADREVAIYSKESIIFGASSVDFSL 294 (354)
T ss_dssp SCEEEEETTTCCEEEEECCCSSC-EEEEEECTTS-SEEEEE---ETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECT
T ss_pred CeEEEEECCCCcEEEEecCCCCC-eEEEEEeCCC-CEEEEE---eCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeC
Confidence 99999999999999999999887 9999999985 455555 589999999998754322222222335788999999
Q ss_pred CCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEE
Q psy14130 321 DTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFK 382 (494)
Q Consensus 321 ~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~ 382 (494)
++++| ++|+.|+.|++||+.+++.+..+ . .+..+|.+++|+|++.+++++ |+.+++|+
T Consensus 295 ~g~~l-~~g~~d~~i~vwd~~~~~~~~~l-~--~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 295 SGRLL-FAGYNDYTINVWDVLKGSRVSIL-F--GHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp TSSEE-EEEETTSCEEEEETTTCSEEEEE-C--CCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred CCCEE-EEEECCCcEEEEECCCCceEEEE-E--CCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 99998 89999999999999998865443 2 346789999999999988885 89999994
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-38 Score=304.69 Aligned_cols=224 Identities=14% Similarity=0.141 Sum_probs=184.6
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.|+|||+.+++... .....+.+|...|++++|+|++ ++|++|+.|++|++||+++++++..+.+|.+.|++++|+
T Consensus 103 g~v~lWd~~~~~~~~---~~~~~~~~H~~~V~~v~~spdg-~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~ 178 (344)
T 4gqb_B 103 GAVELWELDENETLI---VSKFCKYEHDDIVSTVSVLSSG-TQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAAS 178 (344)
T ss_dssp SEEEEEEECTTSSCE---EEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred CEEEEEeccCCCcee---EeeccccCCCCCEEEEEECCCC-CEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEec
Confidence 479999999884321 1223456899999999999998 799999999999999999999999999999999999999
Q ss_pred CCCC-EEEEEeCCCeEEEEeCCCCceEEEeeecC-CCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEee
Q psy14130 229 RDGS-RLVTTCKDKTVRVLDPRTGLVISQGVCHP-GTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALET 306 (494)
Q Consensus 229 ~~~~-~l~s~~~d~~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~ 306 (494)
+++. +|++++.|++|++||+++++....+..+. ...+..++|+|+++.++++| +.|+.|++||+++.+....+.
T Consensus 179 ~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg---~~dg~v~~wd~~~~~~~~~~~- 254 (344)
T 4gqb_B 179 PHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFG---DENGTVSLVDTKSTSCVLSSA- 254 (344)
T ss_dssp SSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEE---ETTSEEEEEESCC--CCEEEE-
T ss_pred CCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEe---ccCCcEEEEECCCCcEEEEEc-
Confidence 9874 78999999999999999999887764332 22378899999888899888 799999999999876544433
Q ss_pred ecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCce-eee--ccceeEEEEe
Q psy14130 307 VDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGC-DVT--QCEIFRFFKL 383 (494)
Q Consensus 307 ~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~-~~~--~~~~~~~~~l 383 (494)
.|...|.+++|+|++..++++|+.|++|++||+.+++.+ .. ..|...|++++|+|++.. +++ .|+.+++|++
T Consensus 255 -~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~---~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v 329 (344)
T 4gqb_B 255 -VHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RS---QAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVV 329 (344)
T ss_dssp -CCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EE---CCCSSCEEEEEECSSSTTEEEEEETTSCEEEEEC
T ss_pred -CCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EE---cCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEEC
Confidence 467889999999998655599999999999999988753 22 235678999999999864 444 3999999999
Q ss_pred eC
Q psy14130 384 HT 385 (494)
Q Consensus 384 ~~ 385 (494)
..
T Consensus 330 ~~ 331 (344)
T 4gqb_B 330 PT 331 (344)
T ss_dssp CC
T ss_pred CC
Confidence 77
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-38 Score=306.80 Aligned_cols=224 Identities=13% Similarity=0.140 Sum_probs=180.3
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEE
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSF 227 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~ 227 (494)
.++|+|||+.+++... .......+|...|++++|+|++ ++|++|+.|++|++||+++++.+..+.+|...|++++|
T Consensus 114 dg~v~lWd~~~~~~~~---~~~~~~~~h~~~V~~v~~spdg-~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~ 189 (357)
T 4g56_B 114 SGAVELWEILEKESLL---VNKFAKYEHDDIVKTLSVFSDG-TQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAA 189 (357)
T ss_dssp TSCEEEC--------C---CCCEEECCCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred CCEEEEeeccccceeE---EEeeccCCCCCCEEEEEECCCC-CEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEE
Confidence 3579999998874321 1223456899999999999998 79999999999999999999999999999999999999
Q ss_pred cCCCC-EEEEEeCCCeEEEEeCCCCceEEEeee--cCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeE
Q psy14130 228 NRDGS-RLVTTCKDKTVRVLDPRTGLVISQGVC--HPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLAL 304 (494)
Q Consensus 228 ~~~~~-~l~s~~~d~~v~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~ 304 (494)
++++. ++++++.|++|++||+++++.+..+.. |... +.+++|+|+++.++++| +.|+.|++||+++......+
T Consensus 190 s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~-v~~v~~sp~~~~~la~g---~~d~~i~~wd~~~~~~~~~~ 265 (357)
T 4g56_B 190 CPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTI-PTSVTWHPEKDDTFACG---DETGNVSLVNIKNPDSAQTS 265 (357)
T ss_dssp CTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSC-EEEEEECTTSTTEEEEE---ESSSCEEEEESSCGGGCEEE
T ss_pred ccCCCceeeeeccCCceEEEECCCCceeeeeeecccccc-ccchhhhhcccceEEEe---ecccceeEEECCCCcEeEEE
Confidence 99875 789999999999999999987665543 3344 78999999988899888 79999999999886544333
Q ss_pred eeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEec-CCceeeec--cceeEEE
Q psy14130 305 ETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMP-KRGCDVTQ--CEIFRFF 381 (494)
Q Consensus 305 ~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~~~~--~~~~~~~ 381 (494)
..+...|.+++|+|++..++++|+.|++|++||+++++.+ ..+ .+...|++++|+| ++.+++++ |+.+++|
T Consensus 266 --~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~-~~~---~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW 339 (357)
T 4g56_B 266 --AVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVF-RDL---SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHH 339 (357)
T ss_dssp --CCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEE-EEC---CCSSCEEEEEECSSSTTEEEEEETTSCEEEE
T ss_pred --eccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEe-EEC---CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEE
Confidence 2366789999999998665599999999999999998764 322 3568899999999 67777764 9999999
Q ss_pred EeeC
Q psy14130 382 KLHT 385 (494)
Q Consensus 382 ~l~~ 385 (494)
++..
T Consensus 340 ~~~~ 343 (357)
T 4g56_B 340 HLPS 343 (357)
T ss_dssp ECC-
T ss_pred ECCC
Confidence 9976
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-38 Score=294.93 Aligned_cols=220 Identities=18% Similarity=0.266 Sum_probs=180.3
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC-eEEEEecCCCCceEEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKG-EALTVIDCHPDVINCLSF 227 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~-~~~~~~~~h~~~v~~l~~ 227 (494)
+.|++||+.++ +.+..+.+|...|.+++|+|++ .+|++|+.|++|++||++++ .....+.+|...|.+++|
T Consensus 77 ~~i~vwd~~~~-------~~~~~~~~h~~~v~~~~~~~~~-~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~ 148 (304)
T 2ynn_A 77 FRIRVFNYNTG-------EKVVDFEAHPDYIRSIAVHPTK-PYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAF 148 (304)
T ss_dssp SEEEEEETTTC-------CEEEEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEE
T ss_pred CEEEEEECCCC-------cEEEEEeCCCCcEEEEEEcCCC-CEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEE
Confidence 37999999988 6778899999999999999998 79999999999999999887 566778999999999999
Q ss_pred cC-CCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECC-CCeEEEEEecCCCCceEEEEeCCCCCCceeEe
Q psy14130 228 NR-DGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGD-TGRIVTTGFSRHSDRQVGLWDENDLNTPLALE 305 (494)
Q Consensus 228 ~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~ 305 (494)
+| ++.+|++|+.|++|++||++++.....+..+....+..+.|.+. ++.++++| +.|++|++||+++......+
T Consensus 149 ~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~---s~D~~i~iWd~~~~~~~~~~- 224 (304)
T 2ynn_A 149 NPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITA---SDDLTIKIWDYQTKSCVATL- 224 (304)
T ss_dssp CTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEE---ETTSEEEEEETTTTEEEEEE-
T ss_pred CCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEE---cCCCeEEEEeCCCCccceee-
Confidence 99 67899999999999999999888666665444333788888773 34566666 69999999999875443222
Q ss_pred eecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCc--eeeec-cceeEEEE
Q psy14130 306 TVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRG--CDVTQ-CEIFRFFK 382 (494)
Q Consensus 306 ~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~--~~~~~-~~~~~~~~ 382 (494)
..|...|.+++|+|+++.| ++|+.||.|++||+.+++....+. . +...+.+++|+|++. +++++ ++.+.+|.
T Consensus 225 -~~h~~~v~~~~~~p~~~~l-~s~s~Dg~i~iWd~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~asg~~~g~~~~~ 299 (304)
T 2ynn_A 225 -EGHMSNVSFAVFHPTLPII-ISGSEDGTLKIWNSSTYKVEKTLN-V--GLERSWCIATHPTGRKNYIASGFDNGFTVLS 299 (304)
T ss_dssp -ECCSSCEEEEEECSSSSEE-EEEETTSCEEEEETTTCCEEEEEC-C--SSSSEEEEEECTTCGGGCEEEEETTEEEEEE
T ss_pred -CCCCCCEEEEEECCCCCEE-EEEcCCCeEEEEECCCCceeeecc-C--CCccEEEEEECCCCCceEEEEecCCceEEEE
Confidence 3467889999999999988 999999999999999988754442 2 346799999999875 35555 77788888
Q ss_pred eeC
Q psy14130 383 LHT 385 (494)
Q Consensus 383 l~~ 385 (494)
+..
T Consensus 300 ~~~ 302 (304)
T 2ynn_A 300 LGN 302 (304)
T ss_dssp CC-
T ss_pred ecc
Confidence 764
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-38 Score=309.14 Aligned_cols=298 Identities=19% Similarity=0.245 Sum_probs=227.0
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 82 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~ 82 (494)
+||.++|++++|+| ++++|+|||.|++|+ +|+....+... .+
T Consensus 63 ~gH~~~V~~~~~sp-~~~~l~s~s~D~~v~-iWd~~~~~~~~------------------------------------~~ 104 (380)
T 3iz6_a 63 QGHSGKVYSLDWTP-EKNWIVSASQDGRLI-VWNALTSQKTH------------------------------------AI 104 (380)
T ss_dssp CCCSSCEEEEEECT-TSSCEEEEETTSEEE-EEETTTTEEEE------------------------------------EE
T ss_pred cccccEEEEEEEcC-CCCEEEEEeCCCeEE-EEECCCCccce------------------------------------EE
Confidence 69999999999999 899999999999999 88743221000 00
Q ss_pred eccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCC
Q psy14130 83 PIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLS 162 (494)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~ 162 (494)
.. ....+..++++|+...++..+ .+ +.|+||++.+....
T Consensus 105 ~~--------------------------------h~~~v~~~~~s~~g~~las~~-~d--------~~v~iw~~~~~~~~ 143 (380)
T 3iz6_a 105 KL--------------------------------HCPWVMECAFAPNGQSVACGG-LD--------SACSIFNLSSQADR 143 (380)
T ss_dssp EC--------------------------------CCTTCCCCEECTTSSEEEECC-SS--------SCCEEEECCCCSSC
T ss_pred ec--------------------------------CCCCEEEEEECCCCCEEEEee-CC--------CcEEEEECCCCccc
Confidence 00 001122233444332222222 22 36999999765322
Q ss_pred CCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEe-----cCCCCceEEEEEcC-CCCEEEE
Q psy14130 163 GNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVI-----DCHPDVINCLSFNR-DGSRLVT 236 (494)
Q Consensus 163 ~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~-----~~h~~~v~~l~~~~-~~~~l~s 236 (494)
.........+.+|.+.|.++.|+|+++..|++|+.|++|++||+.+++.+..+ .+|...|.+++|++ ++.+|++
T Consensus 144 ~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s 223 (380)
T 3iz6_a 144 DGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFIS 223 (380)
T ss_dssp CCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEE
T ss_pred cCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEE
Confidence 22223456788999999999999987678999999999999999999988877 67999999999987 8899999
Q ss_pred EeCCCeEEEEeCC-CCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec-----CC
Q psy14130 237 TCKDKTVRVLDPR-TGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD-----SS 310 (494)
Q Consensus 237 ~~~d~~v~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~-----~~ 310 (494)
|+.|++|++||++ .++.+..+.+|.+. +..++|+|+ +.++++| +.|++|++||+++........... +.
T Consensus 224 gs~D~~v~~wd~~~~~~~~~~~~~h~~~-v~~v~~~p~-~~~l~s~---s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~ 298 (380)
T 3iz6_a 224 GSCDTTVRLWDLRITSRAVRTYHGHEGD-INSVKFFPD-GQRFGTG---SDDGTCRLFDMRTGHQLQVYNREPDRNDNEL 298 (380)
T ss_dssp EETTSCEEEEETTTTCCCCEEECCCSSC-CCEEEECTT-SSEEEEE---CSSSCEEEEETTTTEEEEEECCCCSSSCCSS
T ss_pred EECCCeEEEEECCCCCcceEEECCcCCC-eEEEEEecC-CCeEEEE---cCCCeEEEEECCCCcEEEEeccccccccccc
Confidence 9999999999998 45678889999988 999999998 5566666 699999999998754432222111 11
Q ss_pred CceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEeccc-ccCCCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 311 SGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQ-SLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 311 ~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
..+.+++|+|++++| ++|+.||.|++||+..++....+... ..+...|.+++|+|++..++++ |+.+++|++..
T Consensus 299 ~~v~~~~~s~~g~~l-~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 299 PIVTSVAFSISGRLL-FAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp CSCSEEEECSSSSEE-EEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCS
T ss_pred CceEEEEECCCCCEE-EEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCC
Confidence 347899999999999 88999999999999988765444221 2356789999999999999886 89999999876
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-37 Score=318.45 Aligned_cols=331 Identities=14% Similarity=0.169 Sum_probs=226.8
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecC---ceE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGG---GAF 79 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~ 79 (494)
+||...|++++|+| +|++||||+.|++|| +|+....+......+...... -.-++.+++...++....+. +.+
T Consensus 56 ~~h~~~v~~~~~sp-dg~~lasg~~d~~v~-lWd~~~~~~~~~~~~~~~~~~--v~~v~fs~dg~~l~~~~~~~~~~~~v 131 (611)
T 1nr0_A 56 TEHSHQTTVAKTSP-SGYYCASGDVHGNVR-IWDTTQTTHILKTTIPVFSGP--VKDISWDSESKRIAAVGEGRERFGHV 131 (611)
T ss_dssp CCCSSCEEEEEECT-TSSEEEEEETTSEEE-EEESSSTTCCEEEEEECSSSC--EEEEEECTTSCEEEEEECCSSCSEEE
T ss_pred cCCCCceEEEEECC-CCcEEEEEeCCCCEE-EeECCCCcceeeEeecccCCc--eEEEEECCCCCEEEEEECCCCceeEE
Confidence 59999999999999 899999999999999 888643222111111111110 11122233322222111110 111
Q ss_pred EEEeccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceE-EEEEeecCCcEEEEEEcCcEEEEEcCC
Q psy14130 80 LVLPIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFV-AVVTEVAGGGAFLVLPIHRVKLWYIPD 158 (494)
Q Consensus 80 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~v~iw~~~~ 158 (494)
.++.. .. ... .+..+...+..+.++|... .++. ++ .+++|++||..+
T Consensus 132 ~~wd~-------------------~~--~~~--~l~gh~~~v~~v~f~p~~~~~l~s-~s--------~D~~v~lwd~~~ 179 (611)
T 1nr0_A 132 FLFDT-------------------GT--SNG--NLTGQARAMNSVDFKPSRPFRIIS-GS--------DDNTVAIFEGPP 179 (611)
T ss_dssp EETTT-------------------CC--BCB--CCCCCSSCEEEEEECSSSSCEEEE-EE--------TTSCEEEEETTT
T ss_pred EEeeC-------------------CC--Ccc--eecCCCCCceEEEECCCCCeEEEE-Ee--------CCCeEEEEECCC
Confidence 11110 00 000 0111222333444444321 1111 12 234799999877
Q ss_pred CCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEec-------CCCCceEEEEEcCCC
Q psy14130 159 GGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVID-------CHPDVINCLSFNRDG 231 (494)
Q Consensus 159 ~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-------~h~~~v~~l~~~~~~ 231 (494)
. +....+.+|...|.+++|+|++ .+|++|+.|++|++||+.+++.+..+. +|.+.|.+++|+|+|
T Consensus 180 ~-------~~~~~l~~H~~~V~~v~fspdg-~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg 251 (611)
T 1nr0_A 180 F-------KFKSTFGEHTKFVHSVRYNPDG-SLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDG 251 (611)
T ss_dssp B-------EEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTS
T ss_pred C-------eEeeeeccccCceEEEEECCCC-CEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCC
Confidence 6 6677899999999999999998 799999999999999999999888884 799999999999999
Q ss_pred CEEEEEeCCCeEEEEeCCCCceEEEe-------------------------------------------eecCCCCceEE
Q psy14130 232 SRLVTTCKDKTVRVLDPRTGLVISQG-------------------------------------------VCHPGTRSSKA 268 (494)
Q Consensus 232 ~~l~s~~~d~~v~iwd~~~~~~~~~~-------------------------------------------~~~~~~~~~~~ 268 (494)
++|++++.|++|++||+++++++.++ .+|... +..+
T Consensus 252 ~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~-v~~l 330 (611)
T 1nr0_A 252 TKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKA-ITAL 330 (611)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSC-EEEE
T ss_pred CEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCC-EEEE
Confidence 99999999999999999987755433 457666 8999
Q ss_pred EEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeE--------------------------------------------
Q psy14130 269 VFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLAL-------------------------------------------- 304 (494)
Q Consensus 269 ~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~-------------------------------------------- 304 (494)
+|+|++..+++ | +.|++|++||+.+.......
T Consensus 331 ~~spdg~~l~s-~---s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~ 406 (611)
T 1nr0_A 331 SSSADGKTLFS-A---DAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAV 406 (611)
T ss_dssp EECTTSSEEEE-E---ETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCC
T ss_pred EEeCCCCEEEE-E---eCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCcccccccee
Confidence 99998555554 4 48999999998753211000
Q ss_pred ------------------------------------eeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEE
Q psy14130 305 ------------------------------------ETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIH 348 (494)
Q Consensus 305 ------------------------------------~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~ 348 (494)
....+...+.+++|+||+++| ++|+.|+.|++||+.+++....
T Consensus 407 ~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~l-asgs~D~~v~lwd~~~~~~~~~ 485 (611)
T 1nr0_A 407 ANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFV-AVGGQDSKVHVYKLSGASVSEV 485 (611)
T ss_dssp EEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEE-EEEETTSEEEEEEEETTEEEEE
T ss_pred eeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEE-EEeCCCCeEEEEEccCCceeee
Confidence 000112346789999999998 9999999999999988653211
Q ss_pred ecccccCCCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 349 FLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 349 ~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
....+...|.+++|+|++.+++++ |+.+++|++..
T Consensus 486 --~~~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~ 522 (611)
T 1nr0_A 486 --KTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVAN 522 (611)
T ss_dssp --EEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGG
T ss_pred --eccCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCC
Confidence 113456789999999999999885 89999999876
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=288.47 Aligned_cols=218 Identities=16% Similarity=0.251 Sum_probs=182.7
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
++|+|||+.++ +.+..+.+|...|.+++|+|++ .+|++|+.|++|++||++ ++++..+.+|...|.+++|+
T Consensus 87 ~~v~~wd~~~~-------~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~ 157 (319)
T 3frx_A 87 KTLRLWDVATG-------ETYQRFVGHKSDVMSVDIDKKA-SMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVV 157 (319)
T ss_dssp SEEEEEETTTT-------EEEEEEECCSSCEEEEEECTTS-CEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEEC
T ss_pred CEEEEEECCCC-------CeeEEEccCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEc
Confidence 47999999988 7778899999999999999998 799999999999999996 56778889999999999999
Q ss_pred CC------CCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCce
Q psy14130 229 RD------GSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPL 302 (494)
Q Consensus 229 ~~------~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~ 302 (494)
|. +..|++++.|+.|++||+++++....+.+|... +..++|+|++ .++++| +.|+.|++||+++...
T Consensus 158 ~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~-v~~~~~sp~g-~~l~s~---~~dg~i~iwd~~~~~~-- 230 (319)
T 3frx_A 158 PNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSN-INTLTASPDG-TLIASA---GKDGEIMLWNLAAKKA-- 230 (319)
T ss_dssp CC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSC-EEEEEECTTS-SEEEEE---ETTCEEEEEETTTTEE--
T ss_pred cCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCc-EEEEEEcCCC-CEEEEE---eCCCeEEEEECCCCcE--
Confidence 85 458999999999999999999999999999988 9999999985 455555 5899999999987543
Q ss_pred eEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccc-----cCCCCeeEEEEecCCceeeec--c
Q psy14130 303 ALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQS-----LSGAPQRGLGFMPKRGCDVTQ--C 375 (494)
Q Consensus 303 ~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~-----~~~~~v~~~~~~p~~~~~~~~--~ 375 (494)
...+.....+.+++|+|++.+| ++++ ++.+++|++..+.....+...+ .+...+.+++|+|++.+++++ |
T Consensus 231 -~~~~~~~~~v~~~~~sp~~~~l-a~~~-~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~D 307 (319)
T 3frx_A 231 -MYTLSAQDEVFSLAFSPNRYWL-AAAT-ATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTD 307 (319)
T ss_dssp -EEEEECCSCEEEEEECSSSSEE-EEEE-TTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETT
T ss_pred -EEEecCCCcEEEEEEcCCCCEE-EEEc-CCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecC
Confidence 2333456789999999999988 6665 4569999998766543332221 234578999999999998875 8
Q ss_pred ceeEEEEeeC
Q psy14130 376 EIFRFFKLHT 385 (494)
Q Consensus 376 ~~~~~~~l~~ 385 (494)
+.+++|++.+
T Consensus 308 g~i~vWd~~t 317 (319)
T 3frx_A 308 NVIRVWQVMT 317 (319)
T ss_dssp SCEEEEEEEE
T ss_pred ceEEEEEEee
Confidence 9999999876
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-36 Score=286.09 Aligned_cols=220 Identities=20% Similarity=0.361 Sum_probs=178.9
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.|++||+.++ +.+..+.+|...|.+++|+|++ ++|++|+.|+.|++||+++++.+..+..|...|.+++|+
T Consensus 87 ~~i~vwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~ 158 (312)
T 4ery_A 87 KTLKIWDVSSG-------KCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN 158 (312)
T ss_dssp SEEEEEETTTC-------CEEEEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEC
T ss_pred CEEEEEECCCC-------cEEEEEcCCCCCEEEEEEcCCC-CEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEc
Confidence 47999999988 6778889999999999999998 799999999999999999999999999999999999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD 308 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~ 308 (494)
|++++|++++.|+.|++||+++++.+..+..+....+..+.|+|++..+++++ .|+.|++||+++...........
T Consensus 159 ~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~d~~i~iwd~~~~~~~~~~~~~~ 234 (312)
T 4ery_A 159 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT----LDNTLKLWDYSKGKCLKTYTGHK 234 (312)
T ss_dssp TTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEE----TTTEEEEEETTTTEEEEEECSSC
T ss_pred CCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEc----CCCeEEEEECCCCcEEEEEEecC
Confidence 99999999999999999999999988777655544488899999865555544 89999999998754432222211
Q ss_pred CCCceEEeEEe-CCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec----cceeEEEEe
Q psy14130 309 SSSGVLFPYYD-HDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ----CEIFRFFKL 383 (494)
Q Consensus 309 ~~~~v~~~~~~-~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~----~~~~~~~~l 383 (494)
.........++ +++.+| ++|+.||.|++||+.+++.+..+. . +...|.+++|+|++..++++ |+.+++|+.
T Consensus 235 ~~~~~~~~~~~~~~~~~l-~sg~~dg~i~vwd~~~~~~~~~~~-~--h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~ 310 (312)
T 4ery_A 235 NEKYCIFANFSVTGGKWI-VSGSEDNLVYIWNLQTKEIVQKLQ-G--HTDVVISTACHPTENIIASAALENDKTIKLWKS 310 (312)
T ss_dssp CSSSCCCEEEECSSSCEE-EECCTTSCEEEEETTTCCEEEEEC-C--CSSCEEEEEECSSSSEEEEEECTTTCCEEEEEC
T ss_pred CceEEEEEEEEeCCCcEE-EEECCCCEEEEEECCCchhhhhhh-c--cCCcEEEEeecCcCCceEEEEccCCccEEEecC
Confidence 11222333444 556666 999999999999999988654443 2 35789999999999988764 899999986
Q ss_pred e
Q psy14130 384 H 384 (494)
Q Consensus 384 ~ 384 (494)
+
T Consensus 311 d 311 (312)
T 4ery_A 311 D 311 (312)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-36 Score=290.43 Aligned_cols=225 Identities=18% Similarity=0.281 Sum_probs=179.8
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC---eEEEEecCCCCceEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKG---EALTVIDCHPDVINCL 225 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~---~~~~~~~~h~~~v~~l 225 (494)
+.|+||++..+.. +.+..+.+|...|.+++|+|++ ++|++|+.|++|++||+.++ ..+..+.+|...|.++
T Consensus 83 ~~v~iw~~~~~~~-----~~~~~~~~h~~~v~~v~~sp~~-~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~ 156 (345)
T 3fm0_A 83 ATTCIWKKNQDDF-----ECVTTLEGHENEVKSVAWAPSG-NLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHV 156 (345)
T ss_dssp SCEEEEEECCC-E-----EEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEE
T ss_pred CcEEEEEccCCCe-----EEEEEccCCCCCceEEEEeCCC-CEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEE
Confidence 4799999887632 4567889999999999999998 79999999999999999876 3566788999999999
Q ss_pred EEcCCCCEEEEEeCCCeEEEEeCCCCc--eEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCce-
Q psy14130 226 SFNRDGSRLVTTCKDKTVRVLDPRTGL--VISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPL- 302 (494)
Q Consensus 226 ~~~~~~~~l~s~~~d~~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~- 302 (494)
+|+|++++|++++.|++|++||.++++ +...+.+|... +..++|+|++ .+|++| +.|++|++||........
T Consensus 157 ~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~-v~~l~~sp~g-~~l~s~---s~D~~v~iW~~~~~~~~~~ 231 (345)
T 3fm0_A 157 VWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHEST-VWSLAFDPSG-QRLASC---SDDRTVRIWRQYLPGNEQG 231 (345)
T ss_dssp EECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSC-EEEEEECTTS-SEEEEE---ETTSCEEEEEEECTTCTTC
T ss_pred EECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCc-eEEEEECCCC-CEEEEE---eCCCeEEEeccccCCCCcc
Confidence 999999999999999999999998876 45778889887 9999999985 455555 599999999964322110
Q ss_pred -----------eEeee--cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCC----ceEEecc--cccCCCCeeEEE
Q psy14130 303 -----------ALETV--DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNER----PYIHFLN--QSLSGAPQRGLG 363 (494)
Q Consensus 303 -----------~~~~~--~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~----~~~~~~~--~~~~~~~v~~~~ 363 (494)
..... .+...|.+++|+|++..| ++++.|+.|++|+...+. +...... ...+...|.+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l-~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~ 310 (345)
T 3fm0_A 232 VACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGAL-ATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVA 310 (345)
T ss_dssp CCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCE-EEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEE
T ss_pred ceeeccCCccceeEEecCCCCCcEEEEEEecCCCEE-EEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeE
Confidence 01111 256789999999999998 899999999999998653 1111111 123567899999
Q ss_pred EecCCc-eeeec--cceeEEEEeeC
Q psy14130 364 FMPKRG-CDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 364 ~~p~~~-~~~~~--~~~~~~~~l~~ 385 (494)
|+|++. +++++ |+.+++|++..
T Consensus 311 ~~p~~~~~laS~s~Dg~v~~W~~~~ 335 (345)
T 3fm0_A 311 WNPKEPGLLASCSDDGEVAFWKYQR 335 (345)
T ss_dssp ECSSSTTEEEEEETTSCEEEEEECC
T ss_pred EeCCCceEEEEcCCCCcEEEEEecC
Confidence 999874 66664 99999999987
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-36 Score=284.04 Aligned_cols=228 Identities=15% Similarity=0.224 Sum_probs=168.6
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCC----CeEEEEecCCCCceEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGK----GEALTVIDCHPDVINC 224 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~----~~~~~~~~~h~~~v~~ 224 (494)
+.|+||++............+..+.+|...|.+++|+|++ ++|++|+.|++|++||+.. .+++..+.+|...|.+
T Consensus 80 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g-~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~ 158 (330)
T 2hes_X 80 STVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDG-YYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKH 158 (330)
T ss_dssp SCEEEEEC-------CCCEEEEEEC----CEEEEEECTTS-CEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEE
T ss_pred CcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCC-CEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEE
Confidence 4799999864321101114567789999999999999998 7999999999999999943 2567788999999999
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEeCCCC--ceEEEeeecCCCCceEEEEECCC-CeEEEEEecCCCCceEEEEeCCCCCCc
Q psy14130 225 LSFNRDGSRLVTTCKDKTVRVLDPRTG--LVISQGVCHPGTRSSKAVFIGDT-GRIVTTGFSRHSDRQVGLWDENDLNTP 301 (494)
Q Consensus 225 l~~~~~~~~l~s~~~d~~v~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~g~~~~~d~~i~iwd~~~~~~~ 301 (494)
++|+|++.+|++++.|++|++||.+++ +++..+.+|... +..+.|+|++ +.++++| +.|++|++||++.....
T Consensus 159 v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~-v~~~~~~~~~~~~~l~s~---s~D~~v~iw~~~~~~~~ 234 (330)
T 2hes_X 159 VIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGT-VWSSDFDKTEGVFRLCSG---SDDSTVRVWKYMGDDED 234 (330)
T ss_dssp EEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSC-EEEEEECCSSSSCEEEEE---ETTSCEEEEEEEEECTT
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCc-EEEEEecCCCCeeEEEEE---eCCCeEEEEEecCCCcc
Confidence 999999999999999999999999876 578888999987 9999999974 3456666 59999999998653211
Q ss_pred -----eeEeee--cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCc--eEEecccccCCC-CeeEEEEec--CCc
Q psy14130 302 -----LALETV--DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERP--YIHFLNQSLSGA-PQRGLGFMP--KRG 369 (494)
Q Consensus 302 -----~~~~~~--~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~--~~~~~~~~~~~~-~v~~~~~~p--~~~ 369 (494)
.....+ .|...|.+++|++++ .| ++++.||.|++||..+++. ...... .+.. .|.+++|+| ++.
T Consensus 235 ~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l-~s~~~dg~v~iw~~~~~~~~~~~~~~~--~h~~~~v~~v~~~~~~~~~ 310 (330)
T 2hes_X 235 DQQEWVCEAILPDVHKRQVYNVAWGFNG-LI-ASVGADGVLAVYEEVDGEWKVFAKRAL--CHGVYEINVVKWLELNGKT 310 (330)
T ss_dssp SCEEEEEEEECCSCCSSCEEEEEECTTS-CE-EEEETTSCEEEEEEETTEEEEEEEESC--TTTTSCEEEEEEC-----C
T ss_pred ccceeEEeeecccccccceEEEEEcCCC-EE-EEEeCCCEEEEEEcCCCceEEEecccc--ccccceEEEEEEecCCCce
Confidence 111112 266789999999765 55 8899999999999988742 222222 2344 799999999 677
Q ss_pred eeeec--cceeEEEEeeC
Q psy14130 370 CDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 370 ~~~~~--~~~~~~~~l~~ 385 (494)
+++++ |+.+++|++..
T Consensus 311 ~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 311 ILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp CEEEEETTSEEEEEEC--
T ss_pred EEEEecCCCcEEEEEecc
Confidence 77764 99999999865
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-35 Score=280.01 Aligned_cols=218 Identities=16% Similarity=0.237 Sum_probs=175.2
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEec---CCCCceEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVID---CHPDVINCL 225 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~---~h~~~v~~l 225 (494)
++|+|||+.++ +.+..+.+|...|.+++|+|++ .+|++|+.|++|++||+... ...... +|...|.++
T Consensus 98 ~~v~lwd~~~~-------~~~~~~~~h~~~v~~v~~sp~~-~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~v~~~ 168 (343)
T 2xzm_R 98 KTLRLWDLRTG-------TTYKRFVGHQSEVYSVAFSPDN-RQILSAGAEREIKLWNILGE-CKFSSAEKENHSDWVSCV 168 (343)
T ss_dssp SEEEEEETTSS-------CEEEEEECCCSCEEEEEECSST-TEEEEEETTSCEEEEESSSC-EEEECCTTTSCSSCEEEE
T ss_pred CcEEEEECCCC-------cEEEEEcCCCCcEEEEEECCCC-CEEEEEcCCCEEEEEeccCC-ceeeeecccCCCceeeee
Confidence 47999999988 6677889999999999999998 79999999999999999744 333333 789999999
Q ss_pred EEcCCC----------CEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeC
Q psy14130 226 SFNRDG----------SRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDE 295 (494)
Q Consensus 226 ~~~~~~----------~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~ 295 (494)
+|+|++ .+|++++.|+.|++||. .++....+.+|... +..++|+|++ .++++| +.|+.|++||+
T Consensus 169 ~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~-v~~~~~s~~g-~~l~sg---s~dg~v~iwd~ 242 (343)
T 2xzm_R 169 RYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESN-VNHLSISPNG-KYIATG---GKDKKLLIWDI 242 (343)
T ss_dssp EECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSC-EEEEEECTTS-SEEEEE---ETTCEEEEEES
T ss_pred eeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCcccc-ceEEEECCCC-CEEEEE---cCCCeEEEEEC
Confidence 999987 79999999999999994 56677888899887 9999999995 555555 59999999999
Q ss_pred CCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceE--Eeccc--------ccCCCCeeEEEEe
Q psy14130 296 NDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYI--HFLNQ--------SLSGAPQRGLGFM 365 (494)
Q Consensus 296 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~--~~~~~--------~~~~~~v~~~~~~ 365 (494)
++...+... ..+...+.+++|+|++.++ ++ +.|+.|++||+.+++... .+... ..+...+.+++|+
T Consensus 243 ~~~~~~~~~--~~~~~~v~~v~~sp~~~~l-a~-~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 318 (343)
T 2xzm_R 243 LNLTYPQRE--FDAGSTINQIAFNPKLQWV-AV-GTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWN 318 (343)
T ss_dssp SCCSSCSEE--EECSSCEEEEEECSSSCEE-EE-EESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEEC
T ss_pred CCCccccee--ecCCCcEEEEEECCCCCEE-EE-ECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEEC
Confidence 654443332 2345579999999999876 54 468889999998876432 21100 1245679999999
Q ss_pred cCCceeeec--cceeEEEEeeC
Q psy14130 366 PKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 366 p~~~~~~~~--~~~~~~~~l~~ 385 (494)
|++..++++ |+.+++|++.+
T Consensus 319 p~g~~l~sg~~Dg~v~~w~~~~ 340 (343)
T 2xzm_R 319 ALGKKLFAGFTDGVIRTFSFET 340 (343)
T ss_dssp SSSCCEEEEETTSEEEEEEEEE
T ss_pred CCCCeEEEecCCceEEEEEEEc
Confidence 999988875 99999999876
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-34 Score=281.79 Aligned_cols=219 Identities=20% Similarity=0.365 Sum_probs=181.5
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.|+|||+.++ +.+..+.+|...|.+++|+|++ .+|++|+.|++|++||+++++....+. +...+.+++|+
T Consensus 145 ~~i~iwd~~~~-------~~~~~~~~h~~~v~~~~~~p~~-~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~ 215 (393)
T 1erj_A 145 RLIRIWDIENR-------KIVMILQGHEQDIYSLDYFPSG-DKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVS 215 (393)
T ss_dssp SCEEEEETTTT-------EEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEEC
T ss_pred CeEEEEECCCC-------cEEEEEccCCCCEEEEEEcCCC-CEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEE
Confidence 47999999987 6778899999999999999998 799999999999999999999888877 66789999999
Q ss_pred C-CCCEEEEEeCCCeEEEEeCCCCceEEEe-------eecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCC
Q psy14130 229 R-DGSRLVTTCKDKTVRVLDPRTGLVISQG-------VCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNT 300 (494)
Q Consensus 229 ~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~ 300 (494)
| ++++|++|+.|+.|++||+++++.+..+ .+|... +..++|+|++. ++++| +.|+.|++||+++...
T Consensus 216 ~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~-v~~v~~~~~g~-~l~s~---s~d~~v~~wd~~~~~~ 290 (393)
T 1erj_A 216 PGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDS-VYSVVFTRDGQ-SVVSG---SLDRSVKLWNLQNANN 290 (393)
T ss_dssp STTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSC-EEEEEECTTSS-EEEEE---ETTSEEEEEEC-----
T ss_pred CCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCC-EEEEEECCCCC-EEEEE---eCCCEEEEEECCCCCC
Confidence 9 8999999999999999999999877776 467776 99999999854 55555 5899999999976432
Q ss_pred c----------eeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEec----
Q psy14130 301 P----------LALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMP---- 366 (494)
Q Consensus 301 ~----------~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p---- 366 (494)
. .......|...|.+++|+|++++| ++|+.|+.|++||+.+++++..+ .. +...|.+++|+|
T Consensus 291 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~sgs~D~~v~iwd~~~~~~~~~l-~~--h~~~v~~v~~~~~~~~ 366 (393)
T 1erj_A 291 KSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYI-LSGSKDRGVLFWDKKSGNPLLML-QG--HRNSVISVAVANGSSL 366 (393)
T ss_dssp ----------CEEEEEECCSSCEEEEEECGGGCEE-EEEETTSEEEEEETTTCCEEEEE-EC--CSSCEEEEEECSSCTT
T ss_pred cccccCCCCCcceEEEecccCcEEEEEECCCCCEE-EEEeCCCeEEEEECCCCeEEEEE-CC--CCCCEEEEEecCCcCc
Confidence 1 112233566789999999999998 89999999999999999875443 22 357899999986
Q ss_pred --CCceeeec--cceeEEEEeeC
Q psy14130 367 --KRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 367 --~~~~~~~~--~~~~~~~~l~~ 385 (494)
++..++++ |+.+++|++..
T Consensus 367 ~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 367 GPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp CTTCEEEEEEETTSEEEEEEEEE
T ss_pred CCCCCEEEEECCCCcEEECcccc
Confidence 56777774 99999999875
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-34 Score=298.16 Aligned_cols=332 Identities=13% Similarity=0.163 Sum_probs=218.7
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccc-cCcccccccccc--eeecCCceEEEEEEEecCceE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYD-NVPITRNAHDSH--FCAANPKFVAVVTEVAGGGAF 79 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~ 79 (494)
+||.+.|++++|+| ++++|+||+.|++|+ +|+....+..... ........+... -++.+++...++ ....++.+
T Consensus 187 ~~H~~~V~~v~fsp-dg~~las~s~D~~i~-lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~-s~s~D~~v 263 (611)
T 1nr0_A 187 GEHTKFVHSVRYNP-DGSLFASTGGDGTIV-LYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIA-SASADKTI 263 (611)
T ss_dssp CCCSSCEEEEEECT-TSSEEEEEETTSCEE-EEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEE-EEETTSEE
T ss_pred ccccCceEEEEECC-CCCEEEEEECCCcEE-EEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEE-EEeCCCeE
Confidence 58999999999999 899999999999999 8875433221100 000000011111 112222222111 12233344
Q ss_pred EEEeccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCC
Q psy14130 80 LVLPIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDG 159 (494)
Q Consensus 80 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~ 159 (494)
.++.+.... +...+........ ....+.+ .+...+.....+.+++|+...+
T Consensus 264 ~lWd~~~~~-------------------~~~~~~~~~~~~~--------~~~~~~~--~~~~l~s~s~d~~i~~~~~~~~ 314 (611)
T 1nr0_A 264 KIWNVATLK-------------------VEKTIPVGTRIED--------QQLGIIW--TKQALVSISANGFINFVNPELG 314 (611)
T ss_dssp EEEETTTTE-------------------EEEEEECCSSGGG--------CEEEEEE--CSSCEEEEETTCCEEEEETTTT
T ss_pred EEEeCCCCc-------------------eeeeecCCCCccc--------eeEEEEE--cCCEEEEEeCCCcEEEEeCCCC
Confidence 443332100 0011111000000 0011111 1222223333457999998876
Q ss_pred CCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEe-cC---------------------
Q psy14130 160 GLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVI-DC--------------------- 217 (494)
Q Consensus 160 ~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~-~~--------------------- 217 (494)
.....+.+|...|.+++|+|++ .+|++++.|++|++||+.+++....+ .+
T Consensus 315 -------~~~~~~~gh~~~v~~l~~spdg-~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~ 386 (611)
T 1nr0_A 315 -------SIDQVRYGHNKAITALSSSADG-KTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSW 386 (611)
T ss_dssp -------EEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEET
T ss_pred -------CcceEEcCCCCCEEEEEEeCCC-CEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEc
Confidence 5667888999999999999998 79999999999999999876543221 01
Q ss_pred ------------------------------------------------------------CCCceEEEEEcCCCCEEEEE
Q psy14130 218 ------------------------------------------------------------HPDVINCLSFNRDGSRLVTT 237 (494)
Q Consensus 218 ------------------------------------------------------------h~~~v~~l~~~~~~~~l~s~ 237 (494)
|...+.+++|+|||++|++|
T Consensus 387 d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasg 466 (611)
T 1nr0_A 387 DDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVG 466 (611)
T ss_dssp TTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEE
T ss_pred CCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEe
Confidence 23457789999999999999
Q ss_pred eCCCeEEEEeCCCCce--EEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec-CCCceE
Q psy14130 238 CKDKTVRVLDPRTGLV--ISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD-SSSGVL 314 (494)
Q Consensus 238 ~~d~~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~v~ 314 (494)
+.|++|++||+.++.. +.. ..|... +..++|+|++ .+++++ +.|++|++||+.+........... |...|.
T Consensus 467 s~D~~v~lwd~~~~~~~~~~~-~~h~~~-v~~v~fspdg-~~las~---s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~ 540 (611)
T 1nr0_A 467 GQDSKVHVYKLSGASVSEVKT-IVHPAE-ITSVAFSNNG-AFLVAT---DQSRKVIPYSVANNFELAHTNSWTFHTAKVA 540 (611)
T ss_dssp ETTSEEEEEEEETTEEEEEEE-EECSSC-EEEEEECTTS-SEEEEE---ETTSCEEEEEGGGTTEESCCCCCCCCSSCEE
T ss_pred CCCCeEEEEEccCCceeeeec-cCCCCc-eEEEEECCCC-CEEEEE---cCCCCEEEEEcCCCCceeeeeeeeeccccee
Confidence 9999999999987753 233 678877 9999999995 455555 599999999987622222111122 678899
Q ss_pred EeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceE-EecccccCCCCeeEEEEecCCceeee--ccceeEEEEe
Q psy14130 315 FPYYDHDTRILFLAGKGDGNIRYYELTNERPYI-HFLNQSLSGAPQRGLGFMPKRGCDVT--QCEIFRFFKL 383 (494)
Q Consensus 315 ~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~-~~~~~~~~~~~v~~~~~~p~~~~~~~--~~~~~~~~~l 383 (494)
+++|+||+++| ++|+.|++|++||+.++.... ..+..+ ....|.+++|+|++. +++ .|+.+++|++
T Consensus 541 ~v~fspdg~~l-asgs~D~~v~lW~~~~~~~~~~~~~~~h-~~~~v~~v~fs~d~~-l~s~~~D~~i~lW~~ 609 (611)
T 1nr0_A 541 CVSWSPDNVRL-ATGSLDNSVIVWNMNKPSDHPIIIKGAH-AMSSVNSVIWLNETT-IVSAGQDSNIKFWNV 609 (611)
T ss_dssp EEEECTTSSEE-EEEETTSCEEEEETTCTTSCCEEETTSS-TTSCEEEEEEEETTE-EEEEETTSCEEEEEC
T ss_pred EEEECCCCCEE-EEEECCCcEEEEECCCcccccchhhccC-cccCeeEEEEcCCCE-EEEecCCCCEEEEec
Confidence 99999999999 999999999999998875322 333322 156899999999998 555 3999999987
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-35 Score=278.63 Aligned_cols=182 Identities=15% Similarity=0.172 Sum_probs=157.2
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEec--CCCCceEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVID--CHPDVINCLS 226 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~--~h~~~v~~l~ 226 (494)
+.|+|||+.++ +.+..+.+|...|.+++|+|++..+|++|+.|++|++||+++++....+. .|...+.+++
T Consensus 149 ~~i~iwd~~~~-------~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 221 (344)
T 4gqb_B 149 ICIKVWDLAQQ-------VVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLA 221 (344)
T ss_dssp SCEEEEETTTT-------EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEE
T ss_pred CeEEEEECCCC-------cEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeee
Confidence 47999999988 78889999999999999999987799999999999999999998888764 4667899999
Q ss_pred EcC-CCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEe
Q psy14130 227 FNR-DGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALE 305 (494)
Q Consensus 227 ~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~ 305 (494)
|+| ++.+|++|+.|++|++||+++++++.++.+|... +.+++|+|++..++++| +.|++|+|||+++.+. ..
T Consensus 222 ~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~-v~~v~fsp~g~~~lasg---s~D~~i~vwd~~~~~~---~~ 294 (344)
T 4gqb_B 222 WHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQC-VTGLVFSPHSVPFLASL---SEDCSLAVLDSSLSEL---FR 294 (344)
T ss_dssp ECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSC-EEEEEECSSSSCCEEEE---ETTSCEEEECTTCCEE---EE
T ss_pred ecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCC-EEEEEEccCCCeEEEEE---eCCCeEEEEECCCCcE---EE
Confidence 999 4678999999999999999999999999999988 99999999977788877 6999999999987532 33
Q ss_pred eecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCC
Q psy14130 306 TVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNER 344 (494)
Q Consensus 306 ~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~ 344 (494)
...|...|.+++|+|+++.++++|+.|++|++|++.++.
T Consensus 295 ~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 295 SQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp ECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred EcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 346778999999999998877899999999999998754
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-34 Score=267.42 Aligned_cols=211 Identities=18% Similarity=0.203 Sum_probs=168.9
Q ss_pred EecccccccEEEEEEcCC--CCCEEEEEeCCCeEEEEECCCCe--EEEEecCCCCceEEEEEcCC--CCEEEEEeCCCeE
Q psy14130 170 MDLHGHKRRVGYIEWHPT--AENVVASAGFDYLIILWDVGKGE--ALTVIDCHPDVINCLSFNRD--GSRLVTTCKDKTV 243 (494)
Q Consensus 170 ~~~~~h~~~V~~~~~~p~--~~~~l~s~s~d~~v~iwd~~~~~--~~~~~~~h~~~v~~l~~~~~--~~~l~s~~~d~~v 243 (494)
.++.+|...|.+++|+|. + ++|+||+.|++|++||+.+++ .+..+.+|...|.+++|+|+ +.+|++++.|++|
T Consensus 47 ~~l~gH~~~V~~v~~s~~~~g-~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v 125 (297)
T 2pm7_B 47 DTLTGHEGPVWRVDWAHPKFG-TILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKV 125 (297)
T ss_dssp EEECCCSSCEEEEEECCGGGC-SEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEE
T ss_pred EEEccccCCeEEEEecCCCcC-CEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcE
Confidence 456679999999999864 5 799999999999999998874 56678889999999999997 8999999999999
Q ss_pred EEEeCCCCc--eEEEeeecCCCCceEEEEECCC------------CeEEEEEecCCCCceEEEEeCCCCCCcee-Eee-e
Q psy14130 244 RVLDPRTGL--VISQGVCHPGTRSSKAVFIGDT------------GRIVTTGFSRHSDRQVGLWDENDLNTPLA-LET-V 307 (494)
Q Consensus 244 ~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~------------~~l~~~g~~~~~d~~i~iwd~~~~~~~~~-~~~-~ 307 (494)
++||++++. ....+.+|... +..+.|+|+. +.++++| +.|++|++||+++...... ... .
T Consensus 126 ~~wd~~~~~~~~~~~~~~h~~~-v~~~~~~p~~~~~~~~~~~~~~~~~l~sg---s~D~~v~lwd~~~~~~~~~~~~~l~ 201 (297)
T 2pm7_B 126 SVVEFKENGTTSPIIIDAHAIG-VNSASWAPATIEEDGEHNGTKESRKFVTG---GADNLVKIWKYNSDAQTYVLESTLE 201 (297)
T ss_dssp EEEEBCSSSCBCCEEEECCSSC-EEEEEECCCC------------CCEEEEE---ETTSCEEEEEEETTTTEEEEEEEEC
T ss_pred EEEEecCCCceeeeeeecccCc-cceEeecCCcccccccCCCCCCcceEEEE---cCCCcEEEEEEcCCCceEEEEEEec
Confidence 999998764 24567788877 8999999863 3567777 6999999999987543221 222 2
Q ss_pred cCCCceEEeEEeCCC--CEEEEEEeCCCcEEEEEeeCCCc--eEEecccccCCCCeeEEEEecCCceeeec--cceeEEE
Q psy14130 308 DSSSGVLFPYYDHDT--RILFLAGKGDGNIRYYELTNERP--YIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFF 381 (494)
Q Consensus 308 ~~~~~v~~~~~~~~~--~~l~~~g~~dg~i~~wd~~~~~~--~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~ 381 (494)
.|...|.+++|+|++ ..++++|+.|++|++||++++.. ....+....+...|.+++|+|++..++++ |+.+++|
T Consensus 202 ~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw 281 (297)
T 2pm7_B 202 GHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLW 281 (297)
T ss_dssp CCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEE
T ss_pred CCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEE
Confidence 466889999999996 34449999999999999987532 12233223446789999999999988874 8999999
Q ss_pred EeeC
Q psy14130 382 KLHT 385 (494)
Q Consensus 382 ~l~~ 385 (494)
+...
T Consensus 282 ~~~~ 285 (297)
T 2pm7_B 282 KENL 285 (297)
T ss_dssp EECT
T ss_pred EECC
Confidence 9876
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-34 Score=270.74 Aligned_cols=244 Identities=20% Similarity=0.268 Sum_probs=195.5
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 82 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~ 82 (494)
+||..+|++++|+| ++.+|+||+.|++|+ +|+....+... .+
T Consensus 77 ~gh~~~v~~~~~~~-~~~~l~s~s~D~~i~-lWd~~~~~~~~--~~---------------------------------- 118 (321)
T 3ow8_A 77 EGHQLGVVSVDISH-TLPIAASSSLDAHIR-LWDLENGKQIK--SI---------------------------------- 118 (321)
T ss_dssp CCCSSCEEEEEECS-SSSEEEEEETTSEEE-EEETTTTEEEE--EE----------------------------------
T ss_pred ccCCCCEEEEEECC-CCCEEEEEeCCCcEE-EEECCCCCEEE--EE----------------------------------
Confidence 69999999999999 899999999999999 88753221100 00
Q ss_pred eccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCC
Q psy14130 83 PIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLS 162 (494)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~ 162 (494)
. ........+.++|+...++.. +.+ +.|++|++.++
T Consensus 119 ~--------------------------------~~~~~~~~~~~spdg~~l~~g-~~d--------g~v~i~~~~~~--- 154 (321)
T 3ow8_A 119 D--------------------------------AGPVDAWTLAFSPDSQYLATG-THV--------GKVNIFGVESG--- 154 (321)
T ss_dssp E--------------------------------CCTTCCCCEEECTTSSEEEEE-CTT--------SEEEEEETTTC---
T ss_pred e--------------------------------CCCccEEEEEECCCCCEEEEE-cCC--------CcEEEEEcCCC---
Confidence 0 000111223333332222222 222 36999999988
Q ss_pred CCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCe
Q psy14130 163 GNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKT 242 (494)
Q Consensus 163 ~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~ 242 (494)
.....+..|...|.+++|+|++ ++|++|+.|+.|++||+++++.+..+.+|...|.+++|+|++++|++++.|+.
T Consensus 155 ----~~~~~~~~~~~~v~~~~~spdg-~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~ 229 (321)
T 3ow8_A 155 ----KKEYSLDTRGKFILSIAYSPDG-KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGY 229 (321)
T ss_dssp ----SEEEEEECSSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSC
T ss_pred ----ceeEEecCCCceEEEEEECCCC-CEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCe
Confidence 5667788899999999999998 79999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCC
Q psy14130 243 VRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDT 322 (494)
Q Consensus 243 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 322 (494)
|++||+++++.+..+.+|... +..++|+|++..++ +| +.|++|++||+++......+ ..+...|.+++|+|++
T Consensus 230 i~iwd~~~~~~~~~~~~h~~~-v~~~~~sp~~~~l~-s~---s~D~~v~iwd~~~~~~~~~~--~~h~~~v~~v~~s~~g 302 (321)
T 3ow8_A 230 IKIYDVQHANLAGTLSGHASW-VLNVAFCPDDTHFV-SS---SSDKSVKVWDVGTRTCVHTF--FDHQDQVWGVKYNGNG 302 (321)
T ss_dssp EEEEETTTCCEEEEECCCSSC-EEEEEECTTSSEEE-EE---ETTSCEEEEETTTTEEEEEE--CCCSSCEEEEEECTTS
T ss_pred EEEEECCCcceeEEEcCCCCc-eEEEEECCCCCEEE-EE---eCCCcEEEEeCCCCEEEEEE--cCCCCcEEEEEECCCC
Confidence 999999999999999999988 99999999955554 55 48999999999875443222 3567889999999999
Q ss_pred CEEEEEEeCCCcEEEEEee
Q psy14130 323 RILFLAGKGDGNIRYYELT 341 (494)
Q Consensus 323 ~~l~~~g~~dg~i~~wd~~ 341 (494)
+.| ++++.||.|++||+.
T Consensus 303 ~~l-~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 303 SKI-VSVGDDQEIHIYDCP 320 (321)
T ss_dssp SEE-EEEETTCCEEEEECC
T ss_pred CEE-EEEeCCCeEEEEeCC
Confidence 998 899999999999963
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-34 Score=274.63 Aligned_cols=220 Identities=14% Similarity=0.252 Sum_probs=181.4
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcC-CCCCEEEEEeCCCeEEEEECCCCeEEEEe---cCCCCceEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHP-TAENVVASAGFDYLIILWDVGKGEALTVI---DCHPDVINC 224 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p-~~~~~l~s~s~d~~v~iwd~~~~~~~~~~---~~h~~~v~~ 224 (494)
+.|++||+.++ +.+..+.+|...|.+++|+| ++ .+|++|+.|+.|++||+.+++.+..+ .+|...|.+
T Consensus 95 g~i~v~d~~~~-------~~~~~~~~~~~~i~~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~ 166 (366)
T 3k26_A 95 GIIRIINPITM-------QCIKHYVGHGNAINELKFHPRDP-NLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLS 166 (366)
T ss_dssp CEEEEECTTTC-------CEEEEEESCCSCEEEEEECSSCT-TEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEE
T ss_pred CEEEEEEchhc-------eEeeeecCCCCcEEEEEECCCCC-CEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeE
Confidence 36999999987 66778889999999999999 66 79999999999999999999999888 689999999
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeee----------------------------cCCCCceEEEEECCCCe
Q psy14130 225 LSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVC----------------------------HPGTRSSKAVFIGDTGR 276 (494)
Q Consensus 225 l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~~~ 276 (494)
++|+|++++|++++.|+.|++||+++++.+..+.. |... +.++.|+ +.
T Consensus 167 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~---~~ 242 (366)
T 3k26_A 167 ADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNY-VDCVRWL---GD 242 (366)
T ss_dssp EEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSC-CCEEEEE---TT
T ss_pred EEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcce-EEEEEEc---CC
Confidence 99999999999999999999999998765443332 7776 8999998 33
Q ss_pred EEEEEecCCCCceEEEEeCCCCCCc------------eeEeeecCCCceEEeEEeCC--CCEEEEEEeCCCcEEEEEeeC
Q psy14130 277 IVTTGFSRHSDRQVGLWDENDLNTP------------LALETVDSSSGVLFPYYDHD--TRILFLAGKGDGNIRYYELTN 342 (494)
Q Consensus 277 l~~~g~~~~~d~~i~iwd~~~~~~~------------~~~~~~~~~~~v~~~~~~~~--~~~l~~~g~~dg~i~~wd~~~ 342 (494)
+++++ +.|+.|++||+++.... .......+...+.+++|+|+ +++| ++|+.||.|++||+.+
T Consensus 243 ~l~~~---~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l-~~~~~dg~i~vwd~~~ 318 (366)
T 3k26_A 243 LILSK---SCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKML-ALGNQVGKLYVWDLEV 318 (366)
T ss_dssp EEEEE---CSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEE-EEECTTSCEEEEECCS
T ss_pred EEEEE---ecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEE-EEEecCCcEEEEECCC
Confidence 66666 68999999998875431 11222245567899999999 8988 8999999999999999
Q ss_pred CCceE---EecccccCCCCeeEEEEecCCceeeec--cceeEEEEee
Q psy14130 343 ERPYI---HFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLH 384 (494)
Q Consensus 343 ~~~~~---~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~ 384 (494)
+++.. ..+..+.+..+|.+++|+|++.+++++ |+.+++|++.
T Consensus 319 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 319 EDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp SSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred CCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 86532 233344446889999999999988875 8899999975
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-34 Score=297.45 Aligned_cols=219 Identities=19% Similarity=0.264 Sum_probs=178.2
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEe---cCCCCceEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVI---DCHPDVINCL 225 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~---~~h~~~v~~l 225 (494)
+.|+|||+.++ .....+.+|...|.+++|+|++ .+|+||+.|++|++||+......... .+|...|.++
T Consensus 452 g~v~vwd~~~~-------~~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~ 523 (694)
T 3dm0_A 452 GELRLWDLAAG-------VSTRRFVGHTKDVLSVAFSLDN-RQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCV 523 (694)
T ss_dssp SEEEEEETTTT-------EEEEEEECCSSCEEEEEECTTS-SCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEE
T ss_pred CcEEEEECCCC-------cceeEEeCCCCCEEEEEEeCCC-CEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEE
Confidence 47999999988 6778889999999999999998 79999999999999998765443332 4688999999
Q ss_pred EEcCCC--CEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCcee
Q psy14130 226 SFNRDG--SRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLA 303 (494)
Q Consensus 226 ~~~~~~--~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~ 303 (494)
+|+|++ ..|++++.|++|++||++++++...+.+|.+. +.+++|+|++ .++++| +.|+.|++||+++...
T Consensus 524 ~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~-v~~v~~spdg-~~l~sg---~~Dg~i~iwd~~~~~~--- 595 (694)
T 3dm0_A 524 RFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGY-VSTVAVSPDG-SLCASG---GKDGVVLLWDLAEGKK--- 595 (694)
T ss_dssp EECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSC-EEEEEECTTS-SEEEEE---ETTSBCEEEETTTTEE---
T ss_pred EEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCC-EEEEEEeCCC-CEEEEE---eCCCeEEEEECCCCce---
Confidence 999986 68999999999999999999999999999988 9999999985 555555 5899999999987543
Q ss_pred EeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEeccccc----------------CCCCeeEEEEecC
Q psy14130 304 LETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSL----------------SGAPQRGLGFMPK 367 (494)
Q Consensus 304 ~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~----------------~~~~v~~~~~~p~ 367 (494)
+..+.+...+.+++|+|++.+| +++ .|+.|++||+++++.+..+..... ....+.+++|+|+
T Consensus 596 ~~~~~~~~~v~~~~~sp~~~~l-~~~-~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spd 673 (694)
T 3dm0_A 596 LYSLEANSVIHALCFSPNRYWL-CAA-TEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSAD 673 (694)
T ss_dssp EECCBCSSCEEEEEECSSSSEE-EEE-ETTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTT
T ss_pred EEEecCCCcEEEEEEcCCCcEE-EEE-cCCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCC
Confidence 3334456789999999999877 554 567799999999876544322111 1123789999999
Q ss_pred Cceeeec--cceeEEEEeeC
Q psy14130 368 RGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 368 ~~~~~~~--~~~~~~~~l~~ 385 (494)
+..++++ |+.+++|++..
T Consensus 674 g~~l~sgs~Dg~i~iW~i~~ 693 (694)
T 3dm0_A 674 GSTLFSGYTDGVIRVWGIGR 693 (694)
T ss_dssp SSEEEEEETTSEEEEEEC--
T ss_pred CCEEEEEcCCCeEEEEeccC
Confidence 9999885 99999999753
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-33 Score=264.81 Aligned_cols=293 Identities=16% Similarity=0.194 Sum_probs=218.1
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 82 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~ 82 (494)
+||+++|++|+|+|+++++|+|||.|++|+ +|+.............
T Consensus 35 ~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~-vWd~~~~~~~~~~~~~--------------------------------- 80 (340)
T 4aow_A 35 KGHNGWVTQIATTPQFPDMILSASRDKTII-MWKLTRDETNYGIPQR--------------------------------- 80 (340)
T ss_dssp CCCSSCEEEEEECTTCTTEEEEEETTSCEE-EEEECCSSSCSEEEEE---------------------------------
T ss_pred CCccCCEEEEEEeCCCCCEEEEEcCCCeEE-EEECCCCCcccceeeE---------------------------------
Confidence 699999999999995589999999999999 8886533211000000
Q ss_pred eccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCC
Q psy14130 83 PIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLS 162 (494)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~ 162 (494)
.+......+..+.++|+...++.. +. ++.|++|+....
T Consensus 81 ------------------------------~l~~h~~~V~~~~~s~dg~~l~s~-~~--------d~~i~~~~~~~~--- 118 (340)
T 4aow_A 81 ------------------------------ALRGHSHFVSDVVISSDGQFALSG-SW--------DGTLRLWDLTTG--- 118 (340)
T ss_dssp ------------------------------EECCCSSCEEEEEECTTSSEEEEE-ET--------TSEEEEEETTTT---
T ss_pred ------------------------------EEeCCCCCEEEEEECCCCCEEEEE-cc--------cccceEEeeccc---
Confidence 000000112222232221111111 12 236999999887
Q ss_pred CCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEE-EEecCCCCceEEEEEcCCC--CEEEEEeC
Q psy14130 163 GNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEAL-TVIDCHPDVINCLSFNRDG--SRLVTTCK 239 (494)
Q Consensus 163 ~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~-~~~~~h~~~v~~l~~~~~~--~~l~s~~~ 239 (494)
........+...+..+.+++.+ .+|++|+.|+.+++||+...... ..+.+|...+..++|++++ .++++++.
T Consensus 119 ----~~~~~~~~~~~~~~~~~~~~~~-~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~ 193 (340)
T 4aow_A 119 ----TTTRRFVGHTKDVLSVAFSSDN-RQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGW 193 (340)
T ss_dssp ----EEEEEEECCSSCEEEEEECTTS-SCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEET
T ss_pred ----ceeeeecCCCCceeEEEEeecC-ccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcC
Confidence 5566677788899999999998 79999999999999999776543 4456899999999999864 57899999
Q ss_pred CCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEe
Q psy14130 240 DKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYD 319 (494)
Q Consensus 240 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~ 319 (494)
|+.|++||+++++.+..+.+|.+. +.+++|+|++ .++++| +.|+.|++||+++... ...+.+...+.++.|+
T Consensus 194 d~~i~i~d~~~~~~~~~~~~h~~~-v~~~~~s~~~-~~l~s~---s~Dg~i~iwd~~~~~~---~~~~~~~~~v~~~~~~ 265 (340)
T 4aow_A 194 DKLVKVWNLANCKLKTNHIGHTGY-LNTVTVSPDG-SLCASG---GKDGQAMLWDLNEGKH---LYTLDGGDIINALCFS 265 (340)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSC-EEEEEECTTS-SEEEEE---ETTCEEEEEETTTTEE---EEEEECSSCEEEEEEC
T ss_pred CCEEEEEECCCCceeeEecCCCCc-EEEEEECCCC-CEEEEE---eCCCeEEEEEeccCce---eeeecCCceEEeeecC
Confidence 999999999999999999999987 9999999985 555555 5899999999987543 3344566789999999
Q ss_pred CCCCEEEEEEeCCCcEEEEEeeCCCceEEecc------cccCCCCeeEEEEecCCceeeec--cceeEEEEeeCC
Q psy14130 320 HDTRILFLAGKGDGNIRYYELTNERPYIHFLN------QSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHTT 386 (494)
Q Consensus 320 ~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~------~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~~ 386 (494)
|++.++ +++.|+.|++||++++.....+.. ...+...|.+++|+|++.+++++ |+.+++|++.++
T Consensus 266 ~~~~~~--~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tG 338 (340)
T 4aow_A 266 PNRYWL--CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 338 (340)
T ss_dssp SSSSEE--EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC-
T ss_pred CCCcee--eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCc
Confidence 987655 566899999999988765433322 12346789999999999988875 899999999873
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-33 Score=263.49 Aligned_cols=216 Identities=16% Similarity=0.161 Sum_probs=183.3
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.|++||+.++.. .....+.+|...|.+++|+|++ ++|++++.|+.|++||+++++.+..+..|...|.+++|+
T Consensus 119 ~~i~~~d~~~~~~-----~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~ 192 (337)
T 1gxr_A 119 STLSIWDLAAPTP-----RIKAELTSSAPACYALAISPDS-KVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS 192 (337)
T ss_dssp SEEEEEECCCC-------EEEEEEECSSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred CcEEEEECCCCCc-----ceeeecccCCCceEEEEECCCC-CEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEEC
Confidence 4799999988732 3556778899999999999998 799999999999999999999999999999999999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD 308 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~ 308 (494)
|++++|++++.|+.|++||+++++.+..+. +... +..+.|+|++. ++++| +.++.|++||+++... .....
T Consensus 193 ~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~-v~~~~~s~~~~-~l~~~---~~~~~i~~~~~~~~~~---~~~~~ 263 (337)
T 1gxr_A 193 NDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQ-IFSLGYCPTGE-WLAVG---MESSNVEVLHVNKPDK---YQLHL 263 (337)
T ss_dssp TTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSC-EEEEEECTTSS-EEEEE---ETTSCEEEEETTSSCE---EEECC
T ss_pred CCCCEEEEEecCCcEEEEECCCCceEeeec-CCCc-eEEEEECCCCC-EEEEE---cCCCcEEEEECCCCCe---EEEcC
Confidence 999999999999999999999999877765 4444 89999999855 55555 4899999999987542 23345
Q ss_pred CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEee
Q psy14130 309 SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLH 384 (494)
Q Consensus 309 ~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~ 384 (494)
+...+.+++|+|++++| ++++.||.|++||+.+++.... ..+..++.+++|+|++..++++ |+.+++|++.
T Consensus 264 ~~~~v~~~~~~~~~~~l-~~~~~dg~i~~~~~~~~~~~~~----~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 264 HESCVLSLKFAYCGKWF-VSTGKDNLLNAWRTPYGASIFQ----SKESSSVLSCDISVDDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp CSSCEEEEEECTTSSEE-EEEETTSEEEEEETTTCCEEEE----EECSSCEEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred CccceeEEEECCCCCEE-EEecCCCcEEEEECCCCeEEEE----ecCCCcEEEEEECCCCCEEEEecCCCeEEEEEEe
Confidence 67889999999999998 8899999999999999886522 2346789999999999888764 8899999974
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-33 Score=287.31 Aligned_cols=317 Identities=18% Similarity=0.282 Sum_probs=222.6
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 82 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~ 82 (494)
.||..+|++++|+| ++++|++++.|++|+ +|+...... ..+..... .-.-++.+++...++. ...++.+.++
T Consensus 259 ~~~~~~v~~v~~~~-d~~~l~~~~~d~~i~-~w~~~~~~~---~~~~~h~~--~v~~~~~~~~~~~l~t-~~~d~~i~~w 330 (577)
T 2ymu_A 259 TGHSSSVNGVAFRP-DGQTIASASDDKTVK-LWNRNGQLL---QTLTGHSS--SVWGVAFSPDGQTIAS-ASDDKTVKLW 330 (577)
T ss_dssp CCCSSCEEEEEECT-TSSEEEEEETTSCEE-EEETTSCEE---EEECCCSS--CEEEEEECTTSSEEEE-EETTSCEEEE
T ss_pred ecCCCCEEEEEEcC-CCCEEEEEeCCCEEE-EEeCCCcEE---EEEecCCC--CeEEEEECCCCCEEEE-EeCCCeEEEE
Confidence 58999999999999 899999999999999 787432211 11110000 0001122222222211 2223333333
Q ss_pred eccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCC
Q psy14130 83 PIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLS 162 (494)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~ 162 (494)
..... ... .+.........++++|+...++.. ...+.|++|+.. +
T Consensus 331 ~~~~~--------------------~~~--~~~~~~~~v~~~~~s~~g~~l~~~---------~~dg~v~~~~~~-~--- 375 (577)
T 2ymu_A 331 NRNGQ--------------------HLQ--TLTGHSSSVWGVAFSPDGQTIASA---------SDDKTVKLWNRN-G--- 375 (577)
T ss_dssp ETTSC--------------------EEE--EECCCSSCEEEEEECTTSSEEEEE---------ETTSEEEEEETT-C---
T ss_pred eCCCC--------------------eeE--EEeCCCCCEEEEEECCCCCEEEEE---------eCCCEEEEEcCC-C---
Confidence 22110 000 011111122223333322111111 123469999953 3
Q ss_pred CCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCe
Q psy14130 163 GNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKT 242 (494)
Q Consensus 163 ~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~ 242 (494)
+.+..+.+|...|.+++|+|++ .+|++++.|+.|++||. +++.+..+.+|...|++++|+|++++|++++.|+.
T Consensus 376 ----~~~~~~~~~~~~v~~~~~s~dg-~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~ 449 (577)
T 2ymu_A 376 ----QLLQTLTGHSSSVRGVAFSPDG-QTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKT 449 (577)
T ss_dssp ----CEEEEEECCSSCEEEEEECTTS-SCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred ----CEEEEecCCCCCeEEEEECCCC-CEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCE
Confidence 5567788999999999999998 79999999999999996 57788889999999999999999999999999999
Q ss_pred EEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCC
Q psy14130 243 VRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDT 322 (494)
Q Consensus 243 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 322 (494)
|++||. +++.+..+.+|... +..++|+|++ .+++++ +.|+.|++||... .... ....|...|.+++|+|++
T Consensus 450 v~~w~~-~~~~~~~~~~~~~~-v~~~~~spd~-~~las~---~~d~~i~iw~~~~-~~~~--~~~~h~~~v~~l~~s~dg 520 (577)
T 2ymu_A 450 VKLWNR-NGQLLQTLTGHSSS-VRGVAFSPDG-QTIASA---SDDKTVKLWNRNG-QLLQ--TLTGHSSSVRGVAFSPDG 520 (577)
T ss_dssp EEEEET-TSCEEEEEECCSSC-EEEEEECTTS-CEEEEE---ETTSEEEEEETTS-CEEE--EEECCSSCEEEEEECTTS
T ss_pred EEEEEC-CCCEEEEEcCCCCC-EEEEEEcCCC-CEEEEE---eCCCEEEEEcCCC-CEEE--EEeCCCCCEEEEEEcCCC
Confidence 999996 57788889999887 9999999985 555555 5899999999643 3222 223467889999999999
Q ss_pred CEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEE
Q psy14130 323 RILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFK 382 (494)
Q Consensus 323 ~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~ 382 (494)
++| ++++.||.|++||. +++.+..+. .|..+|++++|+||+.+++++ |+.+++|+
T Consensus 521 ~~l-~s~~~dg~v~lwd~-~~~~~~~~~---~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 521 QTI-ASASDDKTVKLWNR-NGQLLQTLT---GHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp SCE-EEEETTSEEEEECT-TSCEEEEEE---CCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CEE-EEEECcCEEEEEeC-CCCEEEEEc---CCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 999 89999999999996 555544332 246789999999999988875 89999996
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-33 Score=270.22 Aligned_cols=289 Identities=11% Similarity=0.098 Sum_probs=208.1
Q ss_pred CccccceeeEEECCCCC-eeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEE
Q psy14130 3 KLYRGPVLDIKWNPFND-NIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLV 81 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~-~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v 81 (494)
.||...|++++|+| ++ ++|++|+.||+|+ +|+....+.....
T Consensus 70 ~~h~~~v~~~~~~~-~~~~~l~s~~~dg~i~-iwd~~~~~~~~~~----------------------------------- 112 (383)
T 3ei3_B 70 SPFDRRVTSLEWHP-THPTTVAVGSKGGDII-LWDYDVQNKTSFI----------------------------------- 112 (383)
T ss_dssp CCCSSCEEEEEECS-SCTTEEEEEEBTSCEE-EEETTSTTCEEEE-----------------------------------
T ss_pred cCCCCCEEEEEECC-CCCCEEEEEcCCCeEE-EEeCCCcccceee-----------------------------------
Confidence 58999999999999 66 9999999999999 8875432211000
Q ss_pred EeccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCC-ceEEEEEeecCCcEEEEEEcCcEEEEEcCCCC
Q psy14130 82 LPIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANP-KFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGG 160 (494)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~ 160 (494)
........+..+.++| ....++. ++.+ +.|++||+.+..
T Consensus 113 -------------------------------~~~~h~~~v~~~~~~~~~~~~l~s-~~~d--------~~i~iwd~~~~~ 152 (383)
T 3ei3_B 113 -------------------------------QGMGPGDAITGMKFNQFNTNQLFV-SSIR--------GATTLRDFSGSV 152 (383)
T ss_dssp -------------------------------CCCSTTCBEEEEEEETTEEEEEEE-EETT--------TEEEEEETTSCE
T ss_pred -------------------------------ecCCcCCceeEEEeCCCCCCEEEE-EeCC--------CEEEEEECCCCc
Confidence 0000111222333444 1111222 1222 369999998531
Q ss_pred CCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCC-EEEEEeC
Q psy14130 161 LSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGS-RLVTTCK 239 (494)
Q Consensus 161 ~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~-~l~s~~~ 239 (494)
. .......+|...|.+++|+|++ .+|++|+.|+.|++||+ +++.+..+.+|...|.+++|+|+++ +|++++.
T Consensus 153 ~-----~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~ 225 (383)
T 3ei3_B 153 I-----QVFAKTDSWDYWYCCVDVSVSR-QMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSV 225 (383)
T ss_dssp E-----EEEECCCCSSCCEEEEEEETTT-TEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEET
T ss_pred e-----EEEeccCCCCCCeEEEEECCCC-CEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeC
Confidence 1 2222234456889999999998 79999999999999999 5778889999999999999999999 9999999
Q ss_pred CCeEEEEeCCC----CceEEEeeecCCCCceEEEEEC-CCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec-----C
Q psy14130 240 DKTVRVLDPRT----GLVISQGVCHPGTRSSKAVFIG-DTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD-----S 309 (494)
Q Consensus 240 d~~v~iwd~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~-----~ 309 (494)
|+.|++||+++ +.++..+ .|... +..+.|+| + +.+++++ +.|+.|++||+++......+.... +
T Consensus 226 d~~i~iwd~~~~~~~~~~~~~~-~~~~~-v~~~~~s~~~-~~~l~~~---~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 299 (383)
T 3ei3_B 226 DATVKLWDLRNIKDKNSYIAEM-PHEKP-VNAAYFNPTD-STKLLTT---DQRNEIRVYSSYDWSKPDQIIIHPHRQFQH 299 (383)
T ss_dssp TSEEEEEEGGGCCSTTCEEEEE-ECSSC-EEEEEECTTT-SCEEEEE---ESSSEEEEEETTBTTSCSEEEECCBCCCTT
T ss_pred CCEEEEEeCCCCCcccceEEEe-cCCCc-eEEEEEcCCC-CCEEEEE---cCCCcEEEEECCCCcccccccccccccccc
Confidence 99999999998 5566666 67776 99999999 7 4555555 489999999999866554443211 1
Q ss_pred C----------CceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec-ccee
Q psy14130 310 S----------SGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ-CEIF 378 (494)
Q Consensus 310 ~----------~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~-~~~~ 378 (494)
. ..+..++|+|++++ +|+.||.|++||+.+++.+..+ ..+.+...+..++|+|++.+++++ |+.+
T Consensus 300 ~~~~~~~~~p~~~~~~~~~s~dg~~---s~s~d~~i~iwd~~~~~~~~~l-~~~~~~~~~~~~~~s~~g~~l~s~sd~~i 375 (383)
T 3ei3_B 300 LTPIKATWHPMYDLIVAGRYPDDQL---LLNDKRTIDIYDANSGGLVHQL-RDPNAAGIISLNKFSPTGDVLASGMGFNI 375 (383)
T ss_dssp SCCCCCEECSSSSEEEEECBCCTTT---CTTCCCCEEEEETTTCCEEEEE-CBTTBCSCCCEEEECTTSSEEEEEETTEE
T ss_pred ccceEEeccCCCCceEEEecCCccc---ccCCCCeEEEEecCCCceeeee-cCCCCCceEEEEEEecCccEEEEecCCcE
Confidence 1 23334555555554 6678999999999999875444 333345678888999999988775 8899
Q ss_pred EEEEeeC
Q psy14130 379 RFFKLHT 385 (494)
Q Consensus 379 ~~~~l~~ 385 (494)
++|++.+
T Consensus 376 ~iw~~~~ 382 (383)
T 3ei3_B 376 LIWNRED 382 (383)
T ss_dssp EEEECC-
T ss_pred EEEecCC
Confidence 9999865
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-33 Score=275.32 Aligned_cols=177 Identities=20% Similarity=0.385 Sum_probs=157.6
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.|++||+.++ .++..+.+|...|.++.|+|++ .+|++|+.|++|++||+.++++...+.+|...|.+++|+
T Consensus 214 ~~i~~wd~~~~-------~~~~~~~~h~~~v~~~~~~~~g-~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~ 285 (410)
T 1vyh_C 214 KTIKMWEVQTG-------YCVKTFTGHREWVRMVRPNQDG-TLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWA 285 (410)
T ss_dssp SEEEEEETTTC-------CEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEC
T ss_pred CeEEEEECCCC-------cEEEEEeCCCccEEEEEECCCC-CEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEc
Confidence 47999999988 6778899999999999999998 799999999999999999999999999999999999999
Q ss_pred CC--------------------CCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCc
Q psy14130 229 RD--------------------GSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDR 288 (494)
Q Consensus 229 ~~--------------------~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~ 288 (494)
|+ |.+|++|+.|++|++||+++++++..+.+|... +..+.|+|++..+++++ .|+
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~-v~~v~~~~~g~~l~s~s----~D~ 360 (410)
T 1vyh_C 286 PESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCA----DDK 360 (410)
T ss_dssp CSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSC-EEEEEECSSSSCEEEEE----TTT
T ss_pred CcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCc-EEEEEEcCCCCEEEEEe----CCC
Confidence 96 679999999999999999999999999999987 89999999866555555 899
Q ss_pred eEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEee
Q psy14130 289 QVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELT 341 (494)
Q Consensus 289 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~ 341 (494)
.|++||+++......+. .|...|.+++|+|++.+| ++|+.||.|++|+++
T Consensus 361 ~i~vwd~~~~~~~~~~~--~h~~~v~~l~~~~~~~~l-~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 361 TLRVWDYKNKRCMKTLN--AHEHFVTSLDFHKTAPYV-VTGSVDQTVKVWECR 410 (410)
T ss_dssp EEEEECCTTSCCCEEEE--CCSSCEEEEEECSSSSCE-EEEETTSEEEEEC--
T ss_pred eEEEEECCCCceEEEEc--CCCCcEEEEEEcCCCCEE-EEEeCCCcEEEEeCC
Confidence 99999998766544432 466789999999999998 999999999999864
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-32 Score=259.67 Aligned_cols=220 Identities=15% Similarity=0.207 Sum_probs=190.2
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.|+|||+.++ ..+..+.+|...|.+++|+|++ ++|++|+.|++|++||+.+++.+..+.+|.+.|++++|+
T Consensus 35 g~v~lWd~~~~-------~~~~~~~~~~~~v~~~~~~~~~-~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~ 106 (304)
T 2ynn_A 35 GRVELWNYETQ-------VEVRSIQVTETPVRAGKFIARK-NWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVH 106 (304)
T ss_dssp SEEEEEETTTT-------EEEEEEECCSSCEEEEEEEGGG-TEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEC
T ss_pred CcEEEEECCCC-------ceeEEeeccCCcEEEEEEeCCC-CEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEc
Confidence 47999999988 6778889999999999999998 799999999999999999999999999999999999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCc-eEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGL-VISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV 307 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~ 307 (494)
|++++|++|+.|++|++||++++. ....+.+|... +.+++|+|.++.++++| +.|++|++||+++........ .
T Consensus 107 ~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~-v~~v~~~p~~~~~l~sg---s~D~~v~iwd~~~~~~~~~~~-~ 181 (304)
T 2ynn_A 107 PTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHF-VMCVAFNPKDPSTFASG---CLDRTVKVWSLGQSTPNFTLT-T 181 (304)
T ss_dssp SSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSC-EEEEEECTTCTTEEEEE---ETTSEEEEEETTCSSCSEEEE-C
T ss_pred CCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCc-EEEEEECCCCCCEEEEE---eCCCeEEEEECCCCCccceec-c
Confidence 999999999999999999999874 56778889887 99999999767777777 699999999998765544332 2
Q ss_pred cCCCceEEeEEeC--CCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEe
Q psy14130 308 DSSSGVLFPYYDH--DTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKL 383 (494)
Q Consensus 308 ~~~~~v~~~~~~~--~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l 383 (494)
.+...+..+.|+| ++++| ++|+.|+.|++||+++++.+..+. . +...|.+++|+|++..++++ |+.+++|++
T Consensus 182 ~~~~~v~~~~~~~~~~~~~l-~s~s~D~~i~iWd~~~~~~~~~~~-~--h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~ 257 (304)
T 2ynn_A 182 GQERGVNYVDYYPLPDKPYM-ITASDDLTIKIWDYQTKSCVATLE-G--HMSNVSFAVFHPTLPIIISGSEDGTLKIWNS 257 (304)
T ss_dssp CCTTCEEEEEECCSTTCCEE-EEEETTSEEEEEETTTTEEEEEEE-C--CSSCEEEEEECSSSSEEEEEETTSCEEEEET
T ss_pred CCcCcEEEEEEEEcCCCCEE-EEEcCCCeEEEEeCCCCccceeeC-C--CCCCEEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 3456788888887 66677 999999999999999988754443 2 35789999999999888875 899999998
Q ss_pred eC
Q psy14130 384 HT 385 (494)
Q Consensus 384 ~~ 385 (494)
.+
T Consensus 258 ~~ 259 (304)
T 2ynn_A 258 ST 259 (304)
T ss_dssp TT
T ss_pred CC
Confidence 87
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-33 Score=270.97 Aligned_cols=229 Identities=13% Similarity=0.095 Sum_probs=170.6
Q ss_pred cEEEEEcCCCCCCCCcccc--eEecccccccEEEEEEcCCCCCEEE--EEeCCCeEEEEECCCCeEEEEecCCCCceEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEW--IMDLHGHKRRVGYIEWHPTAENVVA--SAGFDYLIILWDVGKGEALTVIDCHPDVINCL 225 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~--~~~~~~h~~~V~~~~~~p~~~~~l~--s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l 225 (494)
.+++|++.+.......... ......+...+.+++|+|+| ++|+ +++.|++|+|||+.+++++..+. |...|.++
T Consensus 105 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg-~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v 182 (365)
T 4h5i_A 105 HLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREG-TVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDL 182 (365)
T ss_dssp CEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTS-SCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEE
T ss_pred cEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCC-CEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEE
Confidence 6899998765321110000 01123455679999999999 5655 44579999999999999998887 77889999
Q ss_pred EEcCCCCEEEEEeCCCeEEEEeCCCCceEEE--eeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCcee
Q psy14130 226 SFNRDGSRLVTTCKDKTVRVLDPRTGLVISQ--GVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLA 303 (494)
Q Consensus 226 ~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~ 303 (494)
+|+|||++|++++.+ .+++|+..+++.+.. ...|... +..++|+|++..+++++..+.....+++||+........
T Consensus 183 ~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~-v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~ 260 (365)
T 4h5i_A 183 HFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWS-LSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVL 260 (365)
T ss_dssp EECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEE-EEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEE
T ss_pred EEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCC-EEEEEEcCCCCEEEEEecCCcceeEEeecccccceecce
Confidence 999999999999855 566777777775543 3445555 889999999666666552111222788999875432211
Q ss_pred --EeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeE
Q psy14130 304 --LETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFR 379 (494)
Q Consensus 304 --~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~ 379 (494)
.....+...|.+++|+|||++| ++|+.|++|+|||+++++++..++..| ..+|++++|+||+.+++++ |+++|
T Consensus 261 ~~~~~~~~~~~V~~~~~Spdg~~l-asgs~D~~V~iwd~~~~~~~~~~~~gH--~~~V~~v~fSpdg~~laS~S~D~tvr 337 (365)
T 4h5i_A 261 RSKQVTNRFKGITSMDVDMKGELA-VLASNDNSIALVKLKDLSMSKIFKQAH--SFAITEVTISPDSTYVASVSAANTIH 337 (365)
T ss_dssp EEEEEESSCSCEEEEEECTTSCEE-EEEETTSCEEEEETTTTEEEEEETTSS--SSCEEEEEECTTSCEEEEEETTSEEE
T ss_pred eeeeecCCCCCeEeEEECCCCCce-EEEcCCCEEEEEECCCCcEEEEecCcc--cCCEEEEEECCCCCEEEEEeCCCeEE
Confidence 1223566789999999999999 999999999999999998866665543 6789999999999999885 99999
Q ss_pred EEEeeC
Q psy14130 380 FFKLHT 385 (494)
Q Consensus 380 ~~~l~~ 385 (494)
||++..
T Consensus 338 vw~ip~ 343 (365)
T 4h5i_A 338 IIKLPL 343 (365)
T ss_dssp EEECCT
T ss_pred EEEcCC
Confidence 999965
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-33 Score=265.47 Aligned_cols=224 Identities=13% Similarity=0.180 Sum_probs=176.5
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEE------cCCCCCEEEEEeCCCeEEEEECCCCe-EEEEecCCCC-
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEW------HPTAENVVASAGFDYLIILWDVGKGE-ALTVIDCHPD- 220 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~------~p~~~~~l~s~s~d~~v~iwd~~~~~-~~~~~~~h~~- 220 (494)
+.|++||+.++. ..+..+.+|...|.+++| +|++ .+|++++.|+.|++||+.+++ .+..+..|.+
T Consensus 90 g~i~iwd~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~s~~~-~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~ 162 (357)
T 3i2n_A 90 GNLHIWNLEAPE------MPVYSVKGHKEIINAIDGIGGLGIGEGA-PEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGE 162 (357)
T ss_dssp SCEEEECTTSCS------SCSEEECCCSSCEEEEEEESGGGCC-CC-CEEEEEETTSCEEEECTTSCSSCSEEECCCTTS
T ss_pred CeEEEEeCCCCC------ccEEEEEecccceEEEeeccccccCCCc-cEEEEEeCCCeEEEEeCCCCCCcceeccccCCC
Confidence 479999999873 266788899999999955 6787 799999999999999999886 6777776655
Q ss_pred ---ceEEEE----EcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEEC---CCCeEEEEEecCCCCceE
Q psy14130 221 ---VINCLS----FNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIG---DTGRIVTTGFSRHSDRQV 290 (494)
Q Consensus 221 ---~v~~l~----~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~g~~~~~d~~i 290 (494)
.|.+++ |+|++++|++++.|+.|++||+++++.... ..|... +..+.|+| ++. ++++| +.|+.|
T Consensus 163 ~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~-v~~~~~~~~~~~~~-~l~~~---~~dg~i 236 (357)
T 3i2n_A 163 NKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNG-VCSLEFDRKDISMN-KLVAT---SLEGKF 236 (357)
T ss_dssp CCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSC-EEEEEESCSSSSCC-EEEEE---ESTTEE
T ss_pred CCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCc-eEEEEcCCCCCCCC-EEEEE---CCCCeE
Confidence 899998 788999999999999999999999886544 556666 89999999 644 45555 489999
Q ss_pred EEEeCCCCCCceeEe---eecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceE----------------Eecc
Q psy14130 291 GLWDENDLNTPLALE---TVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYI----------------HFLN 351 (494)
Q Consensus 291 ~iwd~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~----------------~~~~ 351 (494)
++||+++........ ...+...+.+++|+|+++.++++|+.||.|++||++++.... ....
T Consensus 237 ~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 316 (357)
T 3i2n_A 237 HVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQN 316 (357)
T ss_dssp EEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEE
T ss_pred EEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeec
Confidence 999998654433322 125678899999999999555999999999999999764321 1111
Q ss_pred cccCCCCeeEEEEecCCceee-ec--cceeEEEEeeC
Q psy14130 352 QSLSGAPQRGLGFMPKRGCDV-TQ--CEIFRFFKLHT 385 (494)
Q Consensus 352 ~~~~~~~v~~~~~~p~~~~~~-~~--~~~~~~~~l~~ 385 (494)
...+..+|.+++|+|++..++ ++ |+.+++|++..
T Consensus 317 ~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~ 353 (357)
T 3i2n_A 317 VTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTK 353 (357)
T ss_dssp EECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC
T ss_pred cccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCC
Confidence 223467899999999998876 43 89999999976
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-33 Score=269.80 Aligned_cols=227 Identities=11% Similarity=0.123 Sum_probs=179.0
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccc-----cccEEEEEEc----CCCCCE-EEEEeCCCeEEEEECCC------CeEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGH-----KRRVGYIEWH----PTAENV-VASAGFDYLIILWDVGK------GEAL 212 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h-----~~~V~~~~~~----p~~~~~-l~s~s~d~~v~iwd~~~------~~~~ 212 (494)
+.|++|++.++.... ......+.+| ...|.+++|+ |++ .+ |++++.|+.|++||+.+ ++.+
T Consensus 91 g~i~iw~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 167 (397)
T 1sq9_A 91 GDLLFYRITREDETK--KVIFEKLDLLDSDMKKHSFWALKWGASNDRLL-SHRLVATDVKGTTYIWKFHPFADESNSLTL 167 (397)
T ss_dssp SCEEEEEEEECTTTC--CEEEEEECCSCTTGGGSCEEEEEEECCC-----CEEEEEEETTSCEEEEEEESSSSHHHHTTT
T ss_pred CCEEEEEccCCcccc--cccceeecccccccCCCcEEEEEEeeccCCCC-ceEEEEEeCCCcEEEEeCCcccccccccee
Confidence 479999998873210 0116677788 5999999999 998 68 99999999999999988 6555
Q ss_pred E-----Ee-------cCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeee---c---CCCCceEEEEECCC
Q psy14130 213 T-----VI-------DCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVC---H---PGTRSSKAVFIGDT 274 (494)
Q Consensus 213 ~-----~~-------~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~---~---~~~~~~~~~~~~~~ 274 (494)
. .+ ..|...|.+++|+|++ +|++++.|+.|++||+++++.+..+.. | ... +..++|+|++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~-i~~i~~~~~~ 245 (397)
T 1sq9_A 168 NWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNS-IRSVKFSPQG 245 (397)
T ss_dssp CCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCC-EEEEEECSST
T ss_pred eccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCc-cceEEECCCC
Confidence 5 66 4589999999999999 999999999999999999999999988 8 776 9999999985
Q ss_pred CeEEEEEecCCCC---ceEEEEeCCCCCCceeEeee-----------cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEe
Q psy14130 275 GRIVTTGFSRHSD---RQVGLWDENDLNTPLALETV-----------DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYEL 340 (494)
Q Consensus 275 ~~l~~~g~~~~~d---~~i~iwd~~~~~~~~~~~~~-----------~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~ 340 (494)
. ++++| +.| +.|++||+++......+... .+...+.+++|+|++++| ++|+.||.|++||+
T Consensus 246 ~-~l~~~---~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iwd~ 320 (397)
T 1sq9_A 246 S-LLAIA---HDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETL-CSAGWDGKLRFWDV 320 (397)
T ss_dssp T-EEEEE---EEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEE-EEEETTSEEEEEET
T ss_pred C-EEEEE---ecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEE-EEEeCCCeEEEEEc
Confidence 5 55555 478 99999999876543322210 056789999999999998 88999999999999
Q ss_pred eCCCceEEeccc---ccC---------------CCCeeEEEEecCC----------ceeeec--cceeEEEEeeC
Q psy14130 341 TNERPYIHFLNQ---SLS---------------GAPQRGLGFMPKR----------GCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 341 ~~~~~~~~~~~~---~~~---------------~~~v~~~~~~p~~----------~~~~~~--~~~~~~~~l~~ 385 (494)
.+++.+..+... ..+ ..+|.+++|+|++ .+++++ |+.+++|++..
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 321 KTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp TTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred CCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCC
Confidence 998875554310 022 6789999999998 566654 99999999976
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-32 Score=262.34 Aligned_cols=177 Identities=21% Similarity=0.312 Sum_probs=153.9
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEE
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSF 227 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~ 227 (494)
++.|++||+.++ +.+..+.+|...|.+++|+|++ .+|++|+.|++|++||+++++++..+.+|...|++++|
T Consensus 163 d~~i~~wd~~~~-------~~~~~~~~h~~~v~~~~~~~~~-~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~ 234 (340)
T 1got_B 163 DTTCALWDIETG-------QQTTTFTGHTGDVMSLSLAPDT-RLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICF 234 (340)
T ss_dssp TSCEEEEETTTT-------EEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEE
T ss_pred CCcEEEEECCCC-------cEEEEEcCCCCceEEEEECCCC-CEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEE
Confidence 347999999988 7778899999999999999998 79999999999999999999999999999999999999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCC-CCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEee
Q psy14130 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPG-TRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALET 306 (494)
Q Consensus 228 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~ 306 (494)
+|++++|++|+.|++|++||+++++.+..+..+.. ..+..+.|+|+ +.++++| +.|+.|++||+.+......+
T Consensus 235 ~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~-g~~l~~g---~~d~~i~vwd~~~~~~~~~~-- 308 (340)
T 1got_B 235 FPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKS-GRLLLAG---YDDFNCNVWDALKADRAGVL-- 308 (340)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTT-SSEEEEE---ETTSEEEEEETTTCCEEEEE--
T ss_pred cCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCC-CCEEEEE---CCCCeEEEEEcccCcEeeEe--
Confidence 99999999999999999999999987777653321 23789999998 5566666 59999999999875543322
Q ss_pred ecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEE
Q psy14130 307 VDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYE 339 (494)
Q Consensus 307 ~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd 339 (494)
..|...|.+++|+|++.+| ++|+.||.|++||
T Consensus 309 ~~h~~~v~~~~~s~dg~~l-~s~s~D~~i~iWd 340 (340)
T 1got_B 309 AGHDNRVSCLGVTDDGMAV-ATGSWDSFLKIWN 340 (340)
T ss_dssp ECCSSCEEEEEECTTSSCE-EEEETTSCEEEEC
T ss_pred ecCCCcEEEEEEcCCCCEE-EEEcCCccEEecC
Confidence 3577899999999999999 9999999999996
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-33 Score=266.05 Aligned_cols=207 Identities=15% Similarity=0.181 Sum_probs=163.8
Q ss_pred ecccccccEEEEEEcCC--CCCEEEEEeCCCeEEEEECCCC--eEEEEecCCCCceEEEEEcCC--CCEEEEEeCCCeEE
Q psy14130 171 DLHGHKRRVGYIEWHPT--AENVVASAGFDYLIILWDVGKG--EALTVIDCHPDVINCLSFNRD--GSRLVTTCKDKTVR 244 (494)
Q Consensus 171 ~~~~h~~~V~~~~~~p~--~~~~l~s~s~d~~v~iwd~~~~--~~~~~~~~h~~~v~~l~~~~~--~~~l~s~~~d~~v~ 244 (494)
.+.+|...|.+++|+|. + ++|++|+.|++|++||++++ +.+..+.+|...|.+++|+|+ +.+|++|+.|++|+
T Consensus 52 ~l~gH~~~V~~v~~~~~~~~-~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~ 130 (316)
T 3bg1_A 52 DLRGHEGPVWQVAWAHPMYG-NILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAIS 130 (316)
T ss_dssp EEECCSSCEEEEEECCGGGS-SCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEE
T ss_pred EEcCCCccEEEEEeCCCCCC-CEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEE
Confidence 45679999999999763 5 79999999999999999887 466778899999999999997 78999999999999
Q ss_pred EEeCCCCce---EEEeeecCCCCceEEEEECCC----------------CeEEEEEecCCCCceEEEEeCCCCCCceeEe
Q psy14130 245 VLDPRTGLV---ISQGVCHPGTRSSKAVFIGDT----------------GRIVTTGFSRHSDRQVGLWDENDLNTPLALE 305 (494)
Q Consensus 245 iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~----------------~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~ 305 (494)
+||++.+.. ...+.+|... +..+.|+|+. +.++++| +.|+.|++||++.........
T Consensus 131 lwd~~~~~~~~~~~~~~~h~~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg---s~D~~v~lWd~~~~~~~~~~~ 206 (316)
T 3bg1_A 131 LLTYTGEGQWEVKKINNAHTIG-CNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASG---GCDNLIKLWKEEEDGQWKEEQ 206 (316)
T ss_dssp EEEECSSSCEEECCBTTSSSSC-BCCCEECCCCCC------CCSCCCCCCCBEECC---BTTSBCCEEEECTTSCEEEEE
T ss_pred EEecCCCCCcceeeeeccccCC-cceEEEccccCCccccccccccCccccceEEEe---cCCCeEEEEEeCCCCccceee
Confidence 999987642 3445677766 8889998863 3567777 699999999997543222222
Q ss_pred e-ecCCCceEEeEEeCCC----CEEEEEEeCCCcEEEEEeeCCC---ceEEecccccCCCCeeEEEEecCCceeeec--c
Q psy14130 306 T-VDSSSGVLFPYYDHDT----RILFLAGKGDGNIRYYELTNER---PYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--C 375 (494)
Q Consensus 306 ~-~~~~~~v~~~~~~~~~----~~l~~~g~~dg~i~~wd~~~~~---~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~ 375 (494)
. ..|...|.+++|+|++ +.| ++|+.|++|++||+.+.. .....+. .+...|.+++|+|++..++++ |
T Consensus 207 ~l~~h~~~V~~v~~sp~~~~~~~~l-as~s~D~~v~iw~~~~~~~~~~~~~~~~--~~~~~v~~v~~sp~g~~las~~~D 283 (316)
T 3bg1_A 207 KLEAHSDWVRDVAWAPSIGLPTSTI-ASCSQDGRVFIWTCDDASSNTWSPKLLH--KFNDVVWHVSWSITANILAVSGGD 283 (316)
T ss_dssp CCBCCSSCEEEEECCCCSSCSCCEE-EEEETTCEEEEEECSSTTCCCCBCCEEE--ECSSCEEEEEECTTTCCEEEEESS
T ss_pred ecccCCCceEEEEecCCCCCCCceE-EEEcCCCeEEEEEccCccccchhhhhhh--cCCCcEEEEEEcCCCCEEEEEcCC
Confidence 2 2466789999999987 556 999999999999998731 1111222 236789999999999988774 8
Q ss_pred ceeEEEEeeC
Q psy14130 376 EIFRFFKLHT 385 (494)
Q Consensus 376 ~~~~~~~l~~ 385 (494)
+.+++|++..
T Consensus 284 ~~v~lw~~~~ 293 (316)
T 3bg1_A 284 NKVTLWKESV 293 (316)
T ss_dssp SCEEEEEECT
T ss_pred CeEEEEEECC
Confidence 9999999875
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-32 Score=276.36 Aligned_cols=319 Identities=18% Similarity=0.283 Sum_probs=223.2
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 82 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~ 82 (494)
.+|...|.+++|+| ++++|++++.|++|+ +|+...+.. ..+..... .-.-++..++...++. ...++.+.++
T Consensus 218 ~~~~~~v~~~~~s~-dg~~l~~~~~d~~i~-~w~~~~~~~---~~~~~~~~--~v~~v~~~~d~~~l~~-~~~d~~i~~w 289 (577)
T 2ymu_A 218 TGHSSSVRGVAFSP-DGQTIASASDDKTVK-LWNRNGQLL---QTLTGHSS--SVNGVAFRPDGQTIAS-ASDDKTVKLW 289 (577)
T ss_dssp ECCSSCEEEEEECT-TSSCEEEEETTSCEE-EECTTSCEE---EEECCCSS--CEEEEEECTTSSEEEE-EETTSCEEEE
T ss_pred ecCCCCEEEEEECC-CCCEEEEEeCCCEEE-EEeCCCCEE---EEEecCCC--CEEEEEEcCCCCEEEE-EeCCCEEEEE
Confidence 47999999999999 899999999999999 886432211 11110000 0011112222221111 1222333332
Q ss_pred eccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEE-EcCcEEEEEcCCCCC
Q psy14130 83 PIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL-PIHRVKLWYIPDGGL 161 (494)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~v~iw~~~~~~~ 161 (494)
.... ..... +.........++++|+. ..++.. .++.|++||+...
T Consensus 290 ~~~~--------------------~~~~~--~~~h~~~v~~~~~~~~~----------~~l~t~~~d~~i~~w~~~~~-- 335 (577)
T 2ymu_A 290 NRNG--------------------QLLQT--LTGHSSSVWGVAFSPDG----------QTIASASDDKTVKLWNRNGQ-- 335 (577)
T ss_dssp ETTS--------------------CEEEE--ECCCSSCEEEEEECTTS----------SEEEEEETTSCEEEEETTSC--
T ss_pred eCCC--------------------cEEEE--EecCCCCeEEEEECCCC----------CEEEEEeCCCeEEEEeCCCC--
Confidence 2110 00000 01111122223333322 222222 2347999997643
Q ss_pred CCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCC
Q psy14130 162 SGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDK 241 (494)
Q Consensus 162 ~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~ 241 (494)
.+..+.+|...|.+++|+|++ .+|++++.|+.|++||. +++.+..+.+|...|.+++|+|+|++|++++.|+
T Consensus 336 ------~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~ 407 (577)
T 2ymu_A 336 ------HLQTLTGHSSSVWGVAFSPDG-QTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDK 407 (577)
T ss_dssp ------EEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTS
T ss_pred ------eeEEEeCCCCCEEEEEECCCC-CEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCC
Confidence 456778899999999999998 79999999999999996 5778888999999999999999999999999999
Q ss_pred eEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCC
Q psy14130 242 TVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHD 321 (494)
Q Consensus 242 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 321 (494)
.|++||. +++.+..+.+|... +..++|+|++.. ++++ +.|+.|++||... .. ......+...+.+++|+|+
T Consensus 408 ~v~~~~~-~~~~~~~~~~~~~~-v~~~~~s~d~~~-l~~~---~~d~~v~~w~~~~-~~--~~~~~~~~~~v~~~~~spd 478 (577)
T 2ymu_A 408 TVKLWNR-NGQLLQTLTGHSSS-VWGVAFSPDDQT-IASA---SDDKTVKLWNRNG-QL--LQTLTGHSSSVRGVAFSPD 478 (577)
T ss_dssp EEEEECT-TCCEEEEEECCSSC-EEEEEECTTSSE-EEEE---ETTSEEEEEETTS-CE--EEEEECCSSCEEEEEECTT
T ss_pred EEEEEeC-CCCEEEEecCCCCC-eEEEEECCCCCE-EEEE---cCCCEEEEEECCC-CE--EEEEcCCCCCEEEEEEcCC
Confidence 9999995 57788899999887 999999999554 4555 4899999999653 22 2223356788999999999
Q ss_pred CCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 322 TRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 322 ~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
+++| ++++.|+.|++||. +++.+..+. . +..+|++++|+|++.+++++ |+.+++|++..
T Consensus 479 ~~~l-as~~~d~~i~iw~~-~~~~~~~~~-~--h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~ 539 (577)
T 2ymu_A 479 GQTI-ASASDDKTVKLWNR-NGQLLQTLT-G--HSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG 539 (577)
T ss_dssp SCEE-EEEETTSEEEEEET-TSCEEEEEE-C--CSSCEEEEEECTTSSCEEEEETTSEEEEECTTS
T ss_pred CCEE-EEEeCCCEEEEEcC-CCCEEEEEe-C--CCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCC
Confidence 9998 89999999999995 555544332 2 46789999999999988875 88999999643
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-33 Score=273.34 Aligned_cols=327 Identities=13% Similarity=0.135 Sum_probs=219.9
Q ss_pred ccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEEecc
Q psy14130 6 RGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIH 85 (494)
Q Consensus 6 ~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~ 85 (494)
...+++++|+| ++++|++|+.|+.|+ +|+......... +. ...........++...++ ....++.+.++.+.
T Consensus 56 ~~~~~~~~~s~-~g~~l~~~~~d~~v~-i~d~~~~~~~~~--~~---~~~~~~~~~~~~~~~~l~-~~~~dg~i~iwd~~ 127 (420)
T 3vl1_A 56 VDAGKGNTFEK-VGSHLYKARLDGHDF-LFNTIIRDGSKM--LK---RADYTAVDTAKLQMRRFI-LGTTEGDIKVLDSN 127 (420)
T ss_dssp CBCCTTCEEEE-EETTEEEEEETTEEE-EEECCSEETTTT--SC---SCCEEEEEEECSSSCEEE-EEETTSCEEEECTT
T ss_pred cccccceeeee-cCCeEEEEEcCCcEE-EEEecccceeeE--Ee---cCCceEEEEEecCCCEEE-EEECCCCEEEEeCC
Confidence 44567999999 899999999999999 888654332111 10 000011111122221111 12233444443322
Q ss_pred ccccccCCCCceeecccCCccceeeceec-cCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCCCC
Q psy14130 86 RFRGVRSSKFRHVYGVHSKRDGCYDNVPI-TRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLSGN 164 (494)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~~~ 164 (494)
.. ..+.. ......+..+.++|....++.. ..++.|++||+.++
T Consensus 128 ~~----------------------~~~~~~~~h~~~v~~~~~~~~~~~l~s~---------s~d~~i~iwd~~~~----- 171 (420)
T 3vl1_A 128 FN----------------------LQREIDQAHVSEITKLKFFPSGEALISS---------SQDMQLKIWSVKDG----- 171 (420)
T ss_dssp SC----------------------EEEEETTSSSSCEEEEEECTTSSEEEEE---------ETTSEEEEEETTTC-----
T ss_pred Cc----------------------ceeeecccccCccEEEEECCCCCEEEEE---------eCCCeEEEEeCCCC-----
Confidence 10 00011 1122233334444332211111 12247999999988
Q ss_pred cccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecC---CCCceEE-----------------
Q psy14130 165 LNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDC---HPDVINC----------------- 224 (494)
Q Consensus 165 ~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~---h~~~v~~----------------- 224 (494)
+.+..+.+|...|.+++|+|++ .+|++++.|++|++||+++++.+..+.. |...|.+
T Consensus 172 --~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 248 (420)
T 3vl1_A 172 --SNPRTLIGHRATVTDIAIIDRG-RNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTS 248 (420)
T ss_dssp --CCCEEEECCSSCEEEEEEETTT-TEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCC
T ss_pred --cCceEEcCCCCcEEEEEEcCCC-CEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccC
Confidence 5667888999999999999998 7999999999999999999999988874 3444444
Q ss_pred ----EEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeee-cCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCC
Q psy14130 225 ----LSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVC-HPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLN 299 (494)
Q Consensus 225 ----l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~ 299 (494)
++|+|++++|++++.||.|++||+++++.+..+.. |... +..++|+|++..++++| +.|+.|++||+++..
T Consensus 249 ~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~g---~~dg~i~vwd~~~~~ 324 (420)
T 3vl1_A 249 KKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCS-CNSLTVDGNNANYIYAG---YENGMLAQWDLRSPE 324 (420)
T ss_dssp CCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSC-EEEEEECSSCTTEEEEE---ETTSEEEEEETTCTT
T ss_pred cccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCC-ceeEEEeCCCCCEEEEE---eCCCeEEEEEcCCCc
Confidence 45578999999999999999999999997777754 5555 99999999976477777 699999999999876
Q ss_pred CceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEec------ccccCCCCeeEEEEecCCc----
Q psy14130 300 TPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFL------NQSLSGAPQRGLGFMPKRG---- 369 (494)
Q Consensus 300 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~------~~~~~~~~v~~~~~~p~~~---- 369 (494)
.+.......+...+.++.+ +++++| ++++.||.|++||+.......... ....+...+.+++|+|++.
T Consensus 325 ~~~~~~~~~~~~~v~~~~~-~~~~~l-~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~ 402 (420)
T 3vl1_A 325 CPVGEFLINEGTPINNVYF-AAGALF-VSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGE 402 (420)
T ss_dssp SCSEEEEESTTSCEEEEEE-ETTEEE-EEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCE
T ss_pred CchhhhhccCCCCceEEEe-CCCCEE-EEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcce
Confidence 6444444335566777754 577766 899999999999998742210000 0122457899999999988
Q ss_pred eeeec-cceeEEEEeeC
Q psy14130 370 CDVTQ-CEIFRFFKLHT 385 (494)
Q Consensus 370 ~~~~~-~~~~~~~~l~~ 385 (494)
+++++ ++.+++|++..
T Consensus 403 l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 403 VLEVGKNNFCALYNLSN 419 (420)
T ss_dssp EEEEETTTEEEEEESCC
T ss_pred EEEEcCCceEEEEeccC
Confidence 55554 88999999764
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-32 Score=270.11 Aligned_cols=218 Identities=16% Similarity=0.161 Sum_probs=179.7
Q ss_pred cCcEEEEEcCCCCCCCCcccceEeccccccc---------------EEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEE
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKRR---------------VGYIEWHPTAENVVASAGFDYLIILWDVGKGEAL 212 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~---------------V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~ 212 (494)
.+.|++||+.++ +.+..+..|... +.+++|+|++ .+++++.|+.|++||+.+++.+
T Consensus 170 d~~i~iwd~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~i~~~d~~~~~~~ 240 (425)
T 1r5m_A 170 ENVTILWNVISG-------TVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD--KFVIPGPKGAIFVYQITEKTPT 240 (425)
T ss_dssp TCCEEEEETTTT-------EEEEEECCC---------------CCCBSCCEEEETT--EEEEECGGGCEEEEETTCSSCS
T ss_pred CCeEEEEECCCC-------cEEEEeeccccCccceeeccccCCcceeeEEEEcCCC--EEEEEcCCCeEEEEEcCCCcee
Confidence 357999999887 566666667666 9999999985 6899999999999999999999
Q ss_pred EEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEE
Q psy14130 213 TVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGL 292 (494)
Q Consensus 213 ~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~i 292 (494)
..+..|...|.+++|+|++++|++++.|+.|++||+++++.+..+..|... +..+.|+|++ +++++ +.|+.|++
T Consensus 241 ~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-i~~~~~~~~~--~l~~~---~~d~~i~i 314 (425)
T 1r5m_A 241 GKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQS-IVSASWVGDD--KVISC---SMDGSVRL 314 (425)
T ss_dssp EEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSC-EEEEEEETTT--EEEEE---ETTSEEEE
T ss_pred eeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCcc-EEEEEECCCC--EEEEE---eCCCcEEE
Confidence 999999999999999999999999999999999999999988899888887 9999999985 55555 48999999
Q ss_pred EeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCC--------------------ceEEeccc
Q psy14130 293 WDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNER--------------------PYIHFLNQ 352 (494)
Q Consensus 293 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~--------------------~~~~~~~~ 352 (494)
||+++....... ..+...+.+++|+|++++| ++++.||.|++||+.+++ .+.. +..
T Consensus 315 ~d~~~~~~~~~~--~~~~~~i~~~~~s~~~~~l-~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 390 (425)
T 1r5m_A 315 WSLKQNTLLALS--IVDGVPIFAGRISQDGQKY-AVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYAS-YQS 390 (425)
T ss_dssp EETTTTEEEEEE--ECTTCCEEEEEECTTSSEE-EEEETTSCEEEEECHHHHC--------------CEECCEEEE-ECC
T ss_pred EECCCCcEeEec--ccCCccEEEEEEcCCCCEE-EEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhh-hcC
Confidence 999875432222 2456789999999999998 889999999999999876 3322 222
Q ss_pred ccCCCCeeEEEEecCCceeeec--cceeEEEEee
Q psy14130 353 SLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLH 384 (494)
Q Consensus 353 ~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~ 384 (494)
+....+|.+++|+|++.+++++ |+.+++|++.
T Consensus 391 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 391 SQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp TTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred cccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 2111289999999999888664 8999999975
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-31 Score=258.87 Aligned_cols=216 Identities=15% Similarity=0.192 Sum_probs=179.7
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCC-----CeEEEEECCCCe-----------EE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFD-----YLIILWDVGKGE-----------AL 212 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d-----~~v~iwd~~~~~-----------~~ 212 (494)
+.|++||+.++ +.+..+. |...|.+++|+|++ .+|++++.+ +.|++||+..+. .+
T Consensus 96 g~i~iwd~~~~-------~~~~~~~-~~~~v~~~~~~~~~-~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~ 166 (369)
T 3zwl_B 96 YSIKLWDVSNG-------QCVATWK-SPVPVKRVEFSPCG-NYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPI 166 (369)
T ss_dssp TEEEEEETTTC-------CEEEEEE-CSSCEEEEEECTTS-SEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCS
T ss_pred CeEEEEECCCC-------cEEEEee-cCCCeEEEEEccCC-CEEEEecCCccCCCCEEEEEEecCCccceeeccccccee
Confidence 36999999988 5555666 88999999999998 799999998 999999997553 34
Q ss_pred EEecCCCC--ceEEEEEcCCCCEEEEEeCCCeEEEEeCCC-CceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCce
Q psy14130 213 TVIDCHPD--VINCLSFNRDGSRLVTTCKDKTVRVLDPRT-GLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQ 289 (494)
Q Consensus 213 ~~~~~h~~--~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~ 289 (494)
..+..|.+ .+.+++|+|++++|++++.|+.|++||+++ ++.+..+..|... +..+.|+|++..+ +++ +.|+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l-~~~---~~d~~ 241 (369)
T 3zwl_B 167 HKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKS-ISDMQFSPDLTYF-ITS---SRDTN 241 (369)
T ss_dssp EEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSC-EEEEEECTTSSEE-EEE---ETTSE
T ss_pred eeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCc-eeEEEECCCCCEE-EEe---cCCce
Confidence 45556666 999999999999999999999999999999 6788888888887 9999999985555 455 48999
Q ss_pred EEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCC--------------cEEEEEeeCCCceEEecccccC
Q psy14130 290 VGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDG--------------NIRYYELTNERPYIHFLNQSLS 355 (494)
Q Consensus 290 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg--------------~i~~wd~~~~~~~~~~~~~~~~ 355 (494)
|++||+++..... .+.+...+..++|+|+++++ ++++.++ .+++||+.+++.+..+.. +
T Consensus 242 i~v~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~---~ 314 (369)
T 3zwl_B 242 SFLVDVSTLQVLK---KYETDCPLNTAVITPLKEFI-ILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQG---H 314 (369)
T ss_dssp EEEEETTTCCEEE---EEECSSCEEEEEECSSSSEE-EEEECCC-------------CEEEEEETTTCCEEEEEEC---C
T ss_pred EEEEECCCCceee---eecCCCCceeEEecCCCceE-EEeecCCCceEEEEecCCCcceeEEEecCCCcchhheec---c
Confidence 9999998765432 23367789999999999999 6777777 899999999987554432 3
Q ss_pred CCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 356 GAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 356 ~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
...|.+++|+|++.+++++ |+.+++|++..
T Consensus 315 ~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 315 FGPLNTVAISPQGTSYASGGEDGFIRLHHFEK 346 (369)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEEECH
T ss_pred cCcEEEEEECCCCCEEEEEcCCCeEEEEECcc
Confidence 5789999999999988875 89999999976
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=280.18 Aligned_cols=295 Identities=13% Similarity=0.124 Sum_probs=203.4
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 82 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~ 82 (494)
.+|...|+||+|||.++++||||+.||+|+ +|+...........
T Consensus 116 ~~~~~~V~~l~~~P~~~~~lasGs~dg~i~-lWd~~~~~~~~~~~----------------------------------- 159 (435)
T 4e54_B 116 APFDRRATSLAWHPTHPSTVAVGSKGGDIM-LWNFGIKDKPTFIK----------------------------------- 159 (435)
T ss_dssp EECSSCEEEEEECSSCTTCEEEEETTSCEE-EECSSCCSCCEEEC-----------------------------------
T ss_pred CCCCCCEEEEEEeCCCCCEEEEEeCCCEEE-EEECCCCCceeEEE-----------------------------------
Confidence 468899999999997788999999999999 88754332111000
Q ss_pred eccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCC
Q psy14130 83 PIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLS 162 (494)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~ 162 (494)
...+...+..+.|+|..-..+..++.+ ++|+|||+.++..
T Consensus 160 -------------------------------~~gH~~~V~~l~f~p~~~~~l~s~s~D--------~~v~iwd~~~~~~- 199 (435)
T 4e54_B 160 -------------------------------GIGAGGSITGLKFNPLNTNQFYASSME--------GTTRLQDFKGNIL- 199 (435)
T ss_dssp -------------------------------CCSSSCCCCEEEECSSCTTEEEEECSS--------SCEEEEETTSCEE-
T ss_pred -------------------------------ccCCCCCEEEEEEeCCCCCEEEEEeCC--------CEEEEeeccCCce-
Confidence 000112233334433110011112223 4799999976521
Q ss_pred CCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCC-EEEEEeCCC
Q psy14130 163 GNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGS-RLVTTCKDK 241 (494)
Q Consensus 163 ~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~-~l~s~~~d~ 241 (494)
........+...+.+++|+|++ .+|++|+.||.|++||++ ++.+..+.+|...|++++|+|++. +|++++.|+
T Consensus 200 ----~~~~~~~~~~~~~~~~~~~~~~-~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~ 273 (435)
T 4e54_B 200 ----RVFASSDTINIWFCSLDVSASS-RMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASVDQ 273 (435)
T ss_dssp ----EEEECCSSCSCCCCCEEEETTT-TEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTS
T ss_pred ----eEEeccCCCCccEEEEEECCCC-CEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEecCcc
Confidence 1122223345568899999998 799999999999999996 456778889999999999999876 788999999
Q ss_pred eEEEEeCCCCceEEE---eeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecC----CCceE
Q psy14130 242 TVRVLDPRTGLVISQ---GVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDS----SSGVL 314 (494)
Q Consensus 242 ~v~iwd~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~----~~~v~ 314 (494)
.|++||+++++.... ..+|... +.+++|+|++..+++++ .|+.|+|||+++...+........ ...+.
T Consensus 274 ~v~iwd~~~~~~~~~~~~~~~h~~~-v~~~~~spdg~~l~s~~----~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 348 (435)
T 4e54_B 274 TVKIWDLRQVRGKASFLYSLPHRHP-VNAACFSPDGARLLTTD----QKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPI 348 (435)
T ss_dssp BCCEEETTTCCSSSCCSBCCBCSSC-EEECCBCTTSSEEEEEE----SSSCEEEEESSSSSSEEEECCCCCCCCSSSCCC
T ss_pred eeeEEecccccccceEEEeeecccc-ccceeECCCCCeeEEEc----CCCEEEEEECCCCccceEEecccccccccceeE
Confidence 999999998764333 3567777 89999999865555544 899999999988765544322111 11233
Q ss_pred EeEEeCCCCEEEEE-----------EeCCCcEEEEEeeCCCceEEecccccCCCCeeEE-EEecCCceeeec-cceeEEE
Q psy14130 315 FPYYDHDTRILFLA-----------GKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGL-GFMPKRGCDVTQ-CEIFRFF 381 (494)
Q Consensus 315 ~~~~~~~~~~l~~~-----------g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~-~~~p~~~~~~~~-~~~~~~~ 381 (494)
...|+|++..++++ +..++.|++||..+++.+..+... +...|.++ +|+|++.+++++ |+.+++|
T Consensus 349 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~--~~~~v~s~~~fspdg~~lasg~d~~i~iW 426 (435)
T 4e54_B 349 KAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDP--ESSGISSLNEFNPMGDTLASAMGYHILIW 426 (435)
T ss_dssp BCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCS--SCCCCCCEEEECTTSSCEEEECSSEEEEC
T ss_pred EEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCC--CCCcEEEEEEECCCCCEEEEEcCCcEEEE
Confidence 45566666665332 234467999999999876554433 34567777 699999998886 8899999
Q ss_pred EeeCC
Q psy14130 382 KLHTT 386 (494)
Q Consensus 382 ~l~~~ 386 (494)
++..+
T Consensus 427 ~~~~g 431 (435)
T 4e54_B 427 SQQEA 431 (435)
T ss_dssp CCC--
T ss_pred ECCcC
Confidence 98873
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-33 Score=267.57 Aligned_cols=182 Identities=14% Similarity=0.189 Sum_probs=157.0
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEe--cCCCCceEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVI--DCHPDVINCLS 226 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~--~~h~~~v~~l~ 226 (494)
+.|++||+.++ +.+..+.+|...|++++|+|++..++++++.|++|++||+++++++..+ ..|...+++++
T Consensus 161 g~v~iwd~~~~-------~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~ 233 (357)
T 4g56_B 161 FSVKVWDLSQK-------AVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVT 233 (357)
T ss_dssp SCEEEEETTTT-------EEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEE
T ss_pred CeEEEEECCCC-------cEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchh
Confidence 47999999988 7788899999999999999998778999999999999999998876654 35778899999
Q ss_pred EcCC-CCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEe
Q psy14130 227 FNRD-GSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALE 305 (494)
Q Consensus 227 ~~~~-~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~ 305 (494)
|+|+ +.+|++|+.|+.|++||+++++.+..+.+|... +.+++|+|+++.+|++| +.|++|+|||+++.+. +.
T Consensus 234 ~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~-v~~l~~sp~~~~~lasg---s~D~~i~iwd~~~~~~---~~ 306 (357)
T 4g56_B 234 WHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQN-ITGLAYSYHSSPFLASI---SEDCTVAVLDADFSEV---FR 306 (357)
T ss_dssp ECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSC-EEEEEECSSSSCCEEEE---ETTSCEEEECTTSCEE---EE
T ss_pred hhhcccceEEEeecccceeEEECCCCcEeEEEecccee-EEEEEEcCCCCCEEEEE---eCCCEEEEEECCCCcE---eE
Confidence 9997 568999999999999999999999999999887 99999999987888888 6999999999987532 34
Q ss_pred eecCCCceEEeEEeC-CCCEEEEEEeCCCcEEEEEeeCCCc
Q psy14130 306 TVDSSSGVLFPYYDH-DTRILFLAGKGDGNIRYYELTNERP 345 (494)
Q Consensus 306 ~~~~~~~v~~~~~~~-~~~~l~~~g~~dg~i~~wd~~~~~~ 345 (494)
...|...|.+++|+| ++++| ++|+.||+|++||+.....
T Consensus 307 ~~~H~~~V~~vafsP~d~~~l-~s~s~Dg~v~iW~~~~~~~ 346 (357)
T 4g56_B 307 DLSHRDFVTGVAWSPLDHSKF-TTVGWDHKVLHHHLPSEGR 346 (357)
T ss_dssp ECCCSSCEEEEEECSSSTTEE-EEEETTSCEEEEECC----
T ss_pred ECCCCCCEEEEEEeCCCCCEE-EEEcCCCeEEEEECCCCCc
Confidence 456888999999999 67777 9999999999999976543
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-32 Score=263.71 Aligned_cols=223 Identities=17% Similarity=0.282 Sum_probs=187.8
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECC-CCeEEEEecCCCCceEEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVG-KGEALTVIDCHPDVINCLSF 227 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~-~~~~~~~~~~h~~~v~~l~~ 227 (494)
+.|++||+.++ +.+..+.+|...|.+++|++ .+|++|+.|+.|++||++ .+..+..+.+|.+.|.+++|
T Consensus 156 g~i~iwd~~~~-------~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~ 225 (401)
T 4aez_A 156 GLVDIYDVESQ-------TKLRTMAGHQARVGCLSWNR---HVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAW 225 (401)
T ss_dssp SCEEEEETTTC-------CEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEE
T ss_pred CeEEEEECcCC-------eEEEEecCCCCceEEEEECC---CEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEE
Confidence 47999999988 66778889999999999953 599999999999999998 56678889999999999999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee
Q psy14130 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV 307 (494)
Q Consensus 228 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~ 307 (494)
+|++++|++++.|+.|++||+++++.+..+..|... +..++|+|++..++++| +++.|+.|++||+++... ...+
T Consensus 226 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~-v~~~~~~p~~~~ll~~~-~gs~d~~i~i~d~~~~~~---~~~~ 300 (401)
T 4aez_A 226 RSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAA-VKAVAWCPWQSNLLATG-GGTMDKQIHFWNAATGAR---VNTV 300 (401)
T ss_dssp CTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSC-CCEEEECTTSTTEEEEE-CCTTTCEEEEEETTTCCE---EEEE
T ss_pred cCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcce-EEEEEECCCCCCEEEEe-cCCCCCEEEEEECCCCCE---EEEE
Confidence 999999999999999999999999999999888887 99999999988999987 002699999999987644 2333
Q ss_pred cCCCceEEeEEeCCCCEEEEE-EeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEee
Q psy14130 308 DSSSGVLFPYYDHDTRILFLA-GKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLH 384 (494)
Q Consensus 308 ~~~~~v~~~~~~~~~~~l~~~-g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~ 384 (494)
.+...+.+++|+|+++.++++ |+.||.|++||+.+++..... ....+...|.+++|+|++..++++ |+.+++|++.
T Consensus 301 ~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~-~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~ 379 (401)
T 4aez_A 301 DAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQV-DIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVY 379 (401)
T ss_dssp ECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEE-EEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECC
T ss_pred eCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEE-EecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECC
Confidence 466789999999999999444 558999999999987643322 122346789999999999988774 8999999998
Q ss_pred CCC
Q psy14130 385 TTR 387 (494)
Q Consensus 385 ~~~ 387 (494)
.++
T Consensus 380 ~~~ 382 (401)
T 4aez_A 380 DGD 382 (401)
T ss_dssp C--
T ss_pred CCc
Confidence 743
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-32 Score=270.60 Aligned_cols=230 Identities=12% Similarity=0.138 Sum_probs=181.4
Q ss_pred CcEEEEEcCCCCCCCC--cccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCC------CC
Q psy14130 149 HRVKLWYIPDGGLSGN--LNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCH------PD 220 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~--~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h------~~ 220 (494)
+.|++||+.++..... .......+.+|...|.+++|+|++..+|++++.|+.|++||+++++.+..+..| ..
T Consensus 136 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 215 (416)
T 2pm9_A 136 GEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQ 215 (416)
T ss_dssp SCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCC
T ss_pred CeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCC
Confidence 4799999988741100 001223456799999999999995589999999999999999999999988876 78
Q ss_pred ceEEEEEcCCC-CEEEEEeCCC---eEEEEeCCCC-ceEEEee-ecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEe
Q psy14130 221 VINCLSFNRDG-SRLVTTCKDK---TVRVLDPRTG-LVISQGV-CHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWD 294 (494)
Q Consensus 221 ~v~~l~~~~~~-~~l~s~~~d~---~v~iwd~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd 294 (494)
.|.+++|+|++ .+|++++.|+ .|++||++++ ..+..+. +|... +..++|+|+++.++++| +.|+.|++||
T Consensus 216 ~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~-v~~~~~s~~~~~~l~s~---~~dg~v~~wd 291 (416)
T 2pm9_A 216 QLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKG-ILSLDWCHQDEHLLLSS---GRDNTVLLWN 291 (416)
T ss_dssp CEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSC-EEEEEECSSCSSCEEEE---ESSSEEEEEC
T ss_pred ceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCc-eeEEEeCCCCCCeEEEE---eCCCCEEEee
Confidence 99999999997 6999999998 9999999987 5677777 78877 99999999445666666 5899999999
Q ss_pred CCCCCCceeEeeecCCCceEEeEEeCCC-CEEEEEEeCCCcEEEEEeeCCCceEEec--------------cc-------
Q psy14130 295 ENDLNTPLALETVDSSSGVLFPYYDHDT-RILFLAGKGDGNIRYYELTNERPYIHFL--------------NQ------- 352 (494)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~g~~dg~i~~wd~~~~~~~~~~~--------------~~------- 352 (494)
+++......+ ..+...+.+++|+|++ .+| ++++.||.|++||+.+.+...... ..
T Consensus 292 ~~~~~~~~~~--~~~~~~v~~~~~s~~~~~~l-~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (416)
T 2pm9_A 292 PESAEQLSQF--PARGNWCFKTKFAPEAPDLF-ACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESK 368 (416)
T ss_dssp SSSCCEEEEE--ECSSSCCCCEEECTTCTTEE-EECCSSSEEEEEESCCCCCSSCC----------------------CC
T ss_pred CCCCccceee--cCCCCceEEEEECCCCCCEE-EEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccc
Confidence 9876543322 2466789999999999 555 999999999999998765321110 00
Q ss_pred -----------ccCCCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 353 -----------SLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 353 -----------~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
.-+..++.+++|+|+|.+++++ |+.+++|++.+
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~ 414 (416)
T 2pm9_A 369 EKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKI 414 (416)
T ss_dssp SCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCC
T ss_pred cccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEecc
Confidence 0035678899999999999886 89999999876
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-32 Score=265.00 Aligned_cols=185 Identities=25% Similarity=0.353 Sum_probs=154.3
Q ss_pred CcEEEEEcCCCCCCCCcccceEec-----ccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECC-CCeEEEEecCCCCce
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDL-----HGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVG-KGEALTVIDCHPDVI 222 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~-----~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~-~~~~~~~~~~h~~~v 222 (494)
++|++||+.++ +.+..+ .+|...|.+++|++...++|++|+.|++|++||++ .++.+..+.+|.+.|
T Consensus 180 ~~i~~wd~~~~-------~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v 252 (380)
T 3iz6_a 180 QTCVLWDVTTG-------QRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDI 252 (380)
T ss_dssp SCEEEECTTTC-------CEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCC
T ss_pred CcEEEEEcCCC-------cEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCe
Confidence 37999999988 333333 67999999999988444899999999999999998 457788899999999
Q ss_pred EEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCC------CceEEEEECCCCeEEEEEecCCCCceEEEEeCC
Q psy14130 223 NCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGT------RSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEN 296 (494)
Q Consensus 223 ~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~ 296 (494)
++++|+|++++|++|+.|++|++||+++++.+..+..+... .+..++|+|+ +.++++| +.|+.|++||+.
T Consensus 253 ~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-g~~l~~g---~~dg~i~vwd~~ 328 (380)
T 3iz6_a 253 NSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSIS-GRLLFAG---YSNGDCYVWDTL 328 (380)
T ss_dssp CEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSS-SSEEEEE---CTTSCEEEEETT
T ss_pred EEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCC-CCEEEEE---ECCCCEEEEECC
Confidence 99999999999999999999999999999988877654321 2688999998 5667777 699999999998
Q ss_pred CCCCceeEee--ecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCc
Q psy14130 297 DLNTPLALET--VDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERP 345 (494)
Q Consensus 297 ~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~ 345 (494)
.......... ..|...|.+++|+|++++| ++|+.||.|++|++...+.
T Consensus 329 ~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l-~sgs~D~~i~iW~~~~~~~ 378 (380)
T 3iz6_a 329 LAEMVLNLGTLQNSHEGRISCLGLSSDGSAL-CTGSWDKNLKIWAFSGHRK 378 (380)
T ss_dssp TCCEEEEECCSCSSCCCCCCEEEECSSSSEE-EEECTTSCEEEEECCSSSS
T ss_pred CCceEEEEecccCCCCCceEEEEECCCCCEE-EEeeCCCCEEEEecCCCcc
Confidence 7554333221 2466789999999999998 9999999999999987653
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-32 Score=269.38 Aligned_cols=227 Identities=16% Similarity=0.223 Sum_probs=185.6
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe------EEEE---ecCCC
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE------ALTV---IDCHP 219 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~------~~~~---~~~h~ 219 (494)
+.|++|++.+.... ......+.+|...|.+++|+|++..+|++++.|+.|++||+.+++ .... +..|.
T Consensus 89 g~v~vw~~~~~~~~---~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 165 (416)
T 2pm9_A 89 GSLELYSTNEANNA---INSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSV 165 (416)
T ss_dssp SCEEEECCSSTTSC---CCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSS
T ss_pred CeEEEeeccccccc---ccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCC
Confidence 47999999872111 046678889999999999999844799999999999999999876 3322 36799
Q ss_pred CceEEEEEcCC-CCEEEEEeCCCeEEEEeCCCCceEEEeeecC-----CCCceEEEEECCCCeEEEEEecCCCCc---eE
Q psy14130 220 DVINCLSFNRD-GSRLVTTCKDKTVRVLDPRTGLVISQGVCHP-----GTRSSKAVFIGDTGRIVTTGFSRHSDR---QV 290 (494)
Q Consensus 220 ~~v~~l~~~~~-~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~g~~~~~d~---~i 290 (494)
..|.+++|+|+ +.+|++++.|+.|++||+++++.+..+..+. ...+..++|+|++..+++++ +.|+ .|
T Consensus 166 ~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~---~~d~~~~~i 242 (416)
T 2pm9_A 166 DEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATA---TGSDNDPSI 242 (416)
T ss_dssp CCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEE---ECCSSSCCC
T ss_pred CCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEE---ECCCCCceE
Confidence 99999999998 7899999999999999999999988888773 33499999999976777777 5777 99
Q ss_pred EEEeCCCCCCceeEeeecCCCceEEeEEeC-CCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCC-
Q psy14130 291 GLWDENDLNTPLALETVDSSSGVLFPYYDH-DTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKR- 368 (494)
Q Consensus 291 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~- 368 (494)
++||+++...+.......+...+.+++|+| ++++| ++++.||.|++||+++++++..+. .+..+|.+++|+|++
T Consensus 243 ~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l-~s~~~dg~v~~wd~~~~~~~~~~~---~~~~~v~~~~~s~~~~ 318 (416)
T 2pm9_A 243 LIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLL-LSSGRDNTVLLWNPESAEQLSQFP---ARGNWCFKTKFAPEAP 318 (416)
T ss_dssp CEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCE-EEEESSSEEEEECSSSCCEEEEEE---CSSSCCCCEEECTTCT
T ss_pred EEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeE-EEEeCCCCEEEeeCCCCccceeec---CCCCceEEEEECCCCC
Confidence 999999764443332214678899999999 78877 899999999999999988754443 235789999999998
Q ss_pred ceeeec--cceeEEEEeeC
Q psy14130 369 GCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 369 ~~~~~~--~~~~~~~~l~~ 385 (494)
.+++++ |+.+++|++..
T Consensus 319 ~~l~s~~~d~~i~iw~~~~ 337 (416)
T 2pm9_A 319 DLFACASFDNKIEVQTLQN 337 (416)
T ss_dssp TEEEECCSSSEEEEEESCC
T ss_pred CEEEEEecCCcEEEEEccC
Confidence 677764 89999999987
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-31 Score=256.11 Aligned_cols=218 Identities=17% Similarity=0.208 Sum_probs=175.9
Q ss_pred ecccccccEEEEEEcCC--CCCEEEEEeCCCeEEEEECCCCe--EEEEecCCCCceEEEEEcCC--CCEEEEEeCCCeEE
Q psy14130 171 DLHGHKRRVGYIEWHPT--AENVVASAGFDYLIILWDVGKGE--ALTVIDCHPDVINCLSFNRD--GSRLVTTCKDKTVR 244 (494)
Q Consensus 171 ~~~~h~~~V~~~~~~p~--~~~~l~s~s~d~~v~iwd~~~~~--~~~~~~~h~~~v~~l~~~~~--~~~l~s~~~d~~v~ 244 (494)
.+.+|...|.+++|+++ + .+|++|+.|+.|++||+.+++ .+..+..|...|.+++|+|+ +.+|++++.|+.|+
T Consensus 50 ~~~~h~~~v~~~~~~~~~~~-~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~ 128 (379)
T 3jrp_A 50 TLTGHEGPVWRVDWAHPKFG-TILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVS 128 (379)
T ss_dssp EECCCSSCEEEEEECCGGGC-SEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEE
T ss_pred EecCCCCcEEEEEeCCCCCC-CEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEE
Confidence 45569999999999877 6 799999999999999999987 77788889999999999999 99999999999999
Q ss_pred EEeCCCCc--eEEEeeecCCCCceEEEEECC------------CCeEEEEEecCCCCceEEEEeCCCCCCceeE--eeec
Q psy14130 245 VLDPRTGL--VISQGVCHPGTRSSKAVFIGD------------TGRIVTTGFSRHSDRQVGLWDENDLNTPLAL--ETVD 308 (494)
Q Consensus 245 iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~------------~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~--~~~~ 308 (494)
+||++++. ....+..|... +..+.|+|. ++.++++| +.|+.|++||+++....... ....
T Consensus 129 v~d~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~dg~i~i~d~~~~~~~~~~~~~~~~ 204 (379)
T 3jrp_A 129 VVEFKENGTTSPIIIDAHAIG-VNSASWAPATIEEDGEHNGTKESRKFVTG---GADNLVKIWKYNSDAQTYVLESTLEG 204 (379)
T ss_dssp EEECCTTSCCCEEEEECCTTC-EEEEEECCCC----------CTTCEEEEE---ETTSCEEEEEEETTTTEEEEEEEECC
T ss_pred EEecCCCCceeeEEecCCCCc-eEEEEEcCccccccccccCCCCCCEEEEE---eCCCeEEEEEecCCCcceeeEEEEec
Confidence 99999874 44566778777 999999994 35566666 58999999999875543222 2224
Q ss_pred CCCceEEeEEeCC---CCEEEEEEeCCCcEEEEEeeCCCce--EEecccccCCCCeeEEEEecCCceeeec--cceeEEE
Q psy14130 309 SSSGVLFPYYDHD---TRILFLAGKGDGNIRYYELTNERPY--IHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFF 381 (494)
Q Consensus 309 ~~~~v~~~~~~~~---~~~l~~~g~~dg~i~~wd~~~~~~~--~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~ 381 (494)
|...|.+++|+|+ +++| ++++.||.|++||++++... ........+...+.+++|+|++.+++++ |+.+++|
T Consensus 205 h~~~v~~~~~sp~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw 283 (379)
T 3jrp_A 205 HSDWVRDVAWSPTVLLRSYL-ASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLW 283 (379)
T ss_dssp CSSCEEEEEECCCCSSSEEE-EEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEE
T ss_pred ccCcEeEEEECCCCCCCCeE-EEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEE
Confidence 6678999999999 6666 99999999999999987421 2333344467789999999999988764 8999999
Q ss_pred EeeCCCCeEEEeEE
Q psy14130 382 KLHTTRNMCEPISM 395 (494)
Q Consensus 382 ~l~~~~~~~~~~~~ 395 (494)
++.. ....+++..
T Consensus 284 ~~~~-~~~~~~~~~ 296 (379)
T 3jrp_A 284 KENL-EGKWEPAGE 296 (379)
T ss_dssp EEEE-TTEEEEEEE
T ss_pred eCCC-CCccccccc
Confidence 9987 335555543
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-31 Score=253.59 Aligned_cols=246 Identities=17% Similarity=0.204 Sum_probs=186.1
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 82 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~ 82 (494)
+||...|++++|+| ++++|+||+.|++|+ +|+....+.. ..+
T Consensus 62 ~~h~~~v~~~~~s~-dg~~l~s~s~D~~v~-~wd~~~~~~~--~~~---------------------------------- 103 (319)
T 3frx_A 62 KGHSHIVQDCTLTA-DGAYALSASWDKTLR-LWDVATGETY--QRF---------------------------------- 103 (319)
T ss_dssp ECCSSCEEEEEECT-TSSEEEEEETTSEEE-EEETTTTEEE--EEE----------------------------------
T ss_pred eCCcccEEEEEECC-CCCEEEEEeCCCEEE-EEECCCCCee--EEE----------------------------------
Confidence 58999999999999 899999999999999 8875332210 000
Q ss_pred eccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCC
Q psy14130 83 PIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLS 162 (494)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~ 162 (494)
......+..+.+++....++.. +. +++|++||+..
T Consensus 104 --------------------------------~~h~~~v~~~~~~~~~~~l~s~-s~--------D~~i~vwd~~~---- 138 (319)
T 3frx_A 104 --------------------------------VGHKSDVMSVDIDKKASMIISG-SR--------DKTIKVWTIKG---- 138 (319)
T ss_dssp --------------------------------ECCSSCEEEEEECTTSCEEEEE-ET--------TSCEEEEETTS----
T ss_pred --------------------------------ccCCCcEEEEEEcCCCCEEEEE-eC--------CCeEEEEECCC----
Confidence 0000111122222222112221 22 23799999863
Q ss_pred CCcccceEecccccccEEEEEEcCCC-----CCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEE
Q psy14130 163 GNLNEWIMDLHGHKRRVGYIEWHPTA-----ENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTT 237 (494)
Q Consensus 163 ~~~~~~~~~~~~h~~~V~~~~~~p~~-----~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~ 237 (494)
..+..+.+|...|.+++|+|.. ...|++++.|+.|++||+++++....+.+|...|.+++|+|+|++|+++
T Consensus 139 ----~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~ 214 (319)
T 3frx_A 139 ----QCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASA 214 (319)
T ss_dssp ----CEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEE
T ss_pred ----CeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEE
Confidence 4567888999999999999853 2489999999999999999999999999999999999999999999999
Q ss_pred eCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEe------eecCCC
Q psy14130 238 CKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALE------TVDSSS 311 (494)
Q Consensus 238 ~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~------~~~~~~ 311 (494)
+.|++|++||+++++.+..+..+. . +..++|+|+ +.+++++ .+..+++|++.......... ...+..
T Consensus 215 ~~dg~i~iwd~~~~~~~~~~~~~~-~-v~~~~~sp~-~~~la~~----~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (319)
T 3frx_A 215 GKDGEIMLWNLAAKKAMYTLSAQD-E-VFSLAFSPN-RYWLAAA----TATGIKVFSLDPQYLVDDLRPEFAGYSKAAEP 287 (319)
T ss_dssp ETTCEEEEEETTTTEEEEEEECCS-C-EEEEEECSS-SSEEEEE----ETTEEEEEEETTEEEEEEECCCCTTCCGGGCC
T ss_pred eCCCeEEEEECCCCcEEEEecCCC-c-EEEEEEcCC-CCEEEEE----cCCCcEEEEeCcCeeeeccCccccccccCcCc
Confidence 999999999999999888887654 3 899999998 5566666 36679999987532211111 012345
Q ss_pred ceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCC
Q psy14130 312 GVLFPYYDHDTRILFLAGKGDGNIRYYELTNE 343 (494)
Q Consensus 312 ~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~ 343 (494)
.+.+++|+|||++| ++|+.||.|++||+.++
T Consensus 288 ~v~~~~~spdg~~l-~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 288 HAVSLAWSADGQTL-FAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp CEEEEEECTTSSEE-EEEETTSCEEEEEEEEC
T ss_pred ceeEEEECCCCCEE-EEeecCceEEEEEEeec
Confidence 68899999999999 89999999999999875
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-32 Score=258.21 Aligned_cols=257 Identities=20% Similarity=0.314 Sum_probs=185.6
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 82 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~ 82 (494)
.||...|++++|+| ++++|+||+.|++++ +|+.......+...+
T Consensus 58 ~~h~~~v~~~~~sp-~g~~l~s~s~D~~v~-iw~~~~~~~~~~~~~---------------------------------- 101 (345)
T 3fm0_A 58 EGHQRTVRKVAWSP-CGNYLASASFDATTC-IWKKNQDDFECVTTL---------------------------------- 101 (345)
T ss_dssp SSCSSCEEEEEECT-TSSEEEEEETTSCEE-EEEECCC-EEEEEEE----------------------------------
T ss_pred cccCCcEEEEEECC-CCCEEEEEECCCcEE-EEEccCCCeEEEEEc----------------------------------
Confidence 68999999999999 899999999999999 887532211000000
Q ss_pred eccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCC
Q psy14130 83 PIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLS 162 (494)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~ 162 (494)
......+..+.++|....++..+ . ++.|++||+.++...
T Consensus 102 --------------------------------~~h~~~v~~v~~sp~~~~l~s~s-~--------D~~v~iwd~~~~~~~ 140 (345)
T 3fm0_A 102 --------------------------------EGHENEVKSVAWAPSGNLLATCS-R--------DKSVWVWEVDEEDEY 140 (345)
T ss_dssp --------------------------------CCCSSCEEEEEECTTSSEEEEEE-T--------TSCEEEEEECTTSCE
T ss_pred --------------------------------cCCCCCceEEEEeCCCCEEEEEE-C--------CCeEEEEECCCCCCe
Confidence 00011122233333221122211 2 247999999876321
Q ss_pred CCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe--EEEEecCCCCceEEEEEcCCCCEEEEEeCC
Q psy14130 163 GNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE--ALTVIDCHPDVINCLSFNRDGSRLVTTCKD 240 (494)
Q Consensus 163 ~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~--~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d 240 (494)
..+..+.+|...|.+++|+|++ .+|++|+.|++|++||+.+++ +...+.+|...|++++|+|+|++|++++.|
T Consensus 141 ----~~~~~~~~h~~~v~~~~~~p~~-~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D 215 (345)
T 3fm0_A 141 ----ECVSVLNSHTQDVKHVVWHPSQ-ELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDD 215 (345)
T ss_dssp ----EEEEEECCCCSCEEEEEECSSS-SCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred ----EEEEEecCcCCCeEEEEECCCC-CEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCC
Confidence 3456788999999999999998 699999999999999998875 457789999999999999999999999999
Q ss_pred CeEEEEeCCCC---------------ceEEEeee-cCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCc---
Q psy14130 241 KTVRVLDPRTG---------------LVISQGVC-HPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTP--- 301 (494)
Q Consensus 241 ~~v~iwd~~~~---------------~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~--- 301 (494)
++|++||.... +++..+.+ |... +..++|+++++.+++++ .|+.|++|+......+
T Consensus 216 ~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-v~~v~~~~~~~~l~s~~----~d~~i~vw~~~~~~~~~~~ 290 (345)
T 3fm0_A 216 RTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRT-IYDIAWCQLTGALATAC----GDDAIRVFQEDPNSDPQQP 290 (345)
T ss_dssp SCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSC-EEEEEECTTTCCEEEEE----TTSCEEEEEECTTSCTTSC
T ss_pred CeEEEeccccCCCCccceeeccCCccceeEEecCCCCCc-EEEEEEecCCCEEEEEe----CCCeEEEEEeCCCCCccee
Confidence 99999996432 23444544 5555 89999999966665555 8999999998653321
Q ss_pred e-eE--e-eecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCce
Q psy14130 302 L-AL--E-TVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPY 346 (494)
Q Consensus 302 ~-~~--~-~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~ 346 (494)
. .. . ...|...|.+++|+|++..++++|+.||.|++|++.+++.+
T Consensus 291 ~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~ 339 (345)
T 3fm0_A 291 TFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGL 339 (345)
T ss_dssp CEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC----
T ss_pred eEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCc
Confidence 1 11 1 12466889999999998644499999999999999988753
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-31 Score=251.65 Aligned_cols=217 Identities=14% Similarity=0.197 Sum_probs=168.6
Q ss_pred ecccccccEEEEEEcC--CCCCEEEEEeCCCeEEEEECCCC---------eEEEEecCCCCceEEEEEcCC--CCEEEEE
Q psy14130 171 DLHGHKRRVGYIEWHP--TAENVVASAGFDYLIILWDVGKG---------EALTVIDCHPDVINCLSFNRD--GSRLVTT 237 (494)
Q Consensus 171 ~~~~h~~~V~~~~~~p--~~~~~l~s~s~d~~v~iwd~~~~---------~~~~~~~~h~~~v~~l~~~~~--~~~l~s~ 237 (494)
.+.+|...|.+++|+| ++ .+|++|+.|+.|++||+.++ +.+..+.+|...|.+++|+|+ +.+|+++
T Consensus 52 ~~~~~~~~v~~~~~~~~~d~-~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~ 130 (351)
T 3f3f_A 52 SWRAHDSSIVAIDWASPEYG-RIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACL 130 (351)
T ss_dssp EEECCSSCEEEEEECCGGGC-SEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEE
T ss_pred eeccCCCcEEEEEEcCCCCC-CEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEe
Confidence 4556999999999999 46 79999999999999999887 668888899999999999999 9999999
Q ss_pred eCCCeEEEEeCCCCceEEEee-------------ecCCCCceEEEEECC--CCeEEEEEecCCCCceEEEEeCCCCCCce
Q psy14130 238 CKDKTVRVLDPRTGLVISQGV-------------CHPGTRSSKAVFIGD--TGRIVTTGFSRHSDRQVGLWDENDLNTPL 302 (494)
Q Consensus 238 ~~d~~v~iwd~~~~~~~~~~~-------------~~~~~~~~~~~~~~~--~~~l~~~g~~~~~d~~i~iwd~~~~~~~~ 302 (494)
+.|+.|++||+++++.+..+. .|... +..+.|+|+ .+.++++| +.++.+.+|+........
T Consensus 131 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~ 206 (351)
T 3f3f_A 131 GNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQS-DFCLSWCPSRFSPEKLAVS---ALEQAIIYQRGKDGKLHV 206 (351)
T ss_dssp ETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCC-CEEEEECCCSSSCCEEEEE---ETTEEEEEEECTTSCEEE
T ss_pred cCCCcEEEecCCChHHhccccccccccccccccCCcccc-eeEEEeccCCCCCcEEEEe---cCCCcEEEEccCCCceee
Confidence 999999999999887544432 34555 889999997 34555555 489999888776543322
Q ss_pred eEeeecCCCceEEeEEeCCC----CEEEEEEeCCCcEEEEEeeCCCce--------------------------------
Q psy14130 303 ALETVDSSSGVLFPYYDHDT----RILFLAGKGDGNIRYYELTNERPY-------------------------------- 346 (494)
Q Consensus 303 ~~~~~~~~~~v~~~~~~~~~----~~l~~~g~~dg~i~~wd~~~~~~~-------------------------------- 346 (494)
......|...|.+++|+|++ ++| ++|+.||.|++||++.+...
T Consensus 207 ~~~~~~h~~~i~~~~~~p~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (351)
T 3f3f_A 207 AAKLPGHKSLIRSISWAPSIGRWYQLI-ATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTE 285 (351)
T ss_dssp EEECCCCCSCEEEEEECCCSSCSSEEE-EEEETTSCEEEEEEEECC----------------------------------
T ss_pred eeecCCCCcceeEEEECCCCCCcceEE-EEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccc
Confidence 22333466889999999998 555 99999999999999875210
Q ss_pred ----------EEeccc-ccCCCCeeEEEEecCCceeeec--cceeEEEEeeCCCCeEEEeE
Q psy14130 347 ----------IHFLNQ-SLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHTTRNMCEPIS 394 (494)
Q Consensus 347 ----------~~~~~~-~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~~~~~~~~~~ 394 (494)
...+.. ..+..+|.+++|+|++.+++++ |+.+++|++..+ +..+.+.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~-~~~~~~~ 345 (351)
T 3f3f_A 286 EKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYS-NEFKCMS 345 (351)
T ss_dssp -----CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTT-SCEEEEE
T ss_pred eeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcC-cchhhee
Confidence 011111 1246789999999999988875 899999999983 3455444
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-31 Score=264.76 Aligned_cols=201 Identities=11% Similarity=0.126 Sum_probs=161.6
Q ss_pred ccccEEEEE--EcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecC--CCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy14130 175 HKRRVGYIE--WHPTAENVVASAGFDYLIILWDVGKGEALTVIDC--HPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRT 250 (494)
Q Consensus 175 h~~~V~~~~--~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~--h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~ 250 (494)
+...+.++. +++++ .+|++|+.|+.|++||+++++.+..+.+ |.+.|++++|+|++++|++|+.||.|++||+++
T Consensus 167 ~~~~~~~~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 245 (437)
T 3gre_A 167 KNEYAVRMRAFVNEEK-SLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRF 245 (437)
T ss_dssp SCCCEEEEEEEECSSC-EEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTT
T ss_pred cccCceEEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCC
Confidence 556677777 56777 7999999999999999999999999988 899999999999999999999999999999999
Q ss_pred CceEEEee-ecCCCCceEEEEECC---CCeEEEEEecCCCCceEEEEeCCCCCCceeEeee-------------------
Q psy14130 251 GLVISQGV-CHPGTRSSKAVFIGD---TGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV------------------- 307 (494)
Q Consensus 251 ~~~~~~~~-~~~~~~~~~~~~~~~---~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~------------------- 307 (494)
++++..+. .|... +..++|+|. ++.++++| +.|+.|++||+++......+...
T Consensus 246 ~~~~~~~~~~~~~~-v~~~~~~~~~s~~~~~l~s~---~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 321 (437)
T 3gre_A 246 NVLIRSWSFGDHAP-ITHVEVCQFYGKNSVIVVGG---SSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEEL 321 (437)
T ss_dssp TEEEEEEBCTTCEE-EEEEEECTTTCTTEEEEEEE---STTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGC
T ss_pred ccEEEEEecCCCCc-eEEEEeccccCCCccEEEEE---cCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccc
Confidence 99988886 55554 888877763 36688888 79999999999875533322211
Q ss_pred -----cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEeccc------------------------------
Q psy14130 308 -----DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQ------------------------------ 352 (494)
Q Consensus 308 -----~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~------------------------------ 352 (494)
.+...|.+++|+ ++++| ++|+.||.|++||+.+++....+...
T Consensus 322 ~~~~~~~~~~v~~l~~~-~~~~l-~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (437)
T 3gre_A 322 NFCGIRSLNALSTISVS-NDKIL-LTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHS 399 (437)
T ss_dssp CCCCCCSGGGGCCEEEE-TTEEE-EEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC------
T ss_pred eecccccCCceEEEEEC-CceEE-EecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccc
Confidence 144568889999 66666 99999999999999998865444321
Q ss_pred ----ccCCCCeeEEEEecC--Cceeeec--cceeEEEE
Q psy14130 353 ----SLSGAPQRGLGFMPK--RGCDVTQ--CEIFRFFK 382 (494)
Q Consensus 353 ----~~~~~~v~~~~~~p~--~~~~~~~--~~~~~~~~ 382 (494)
..+...|.+++|+++ +.+++++ |+.+++|+
T Consensus 400 ~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 400 VDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp -------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred cCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 015788999999998 7777775 89999994
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-30 Score=246.01 Aligned_cols=213 Identities=15% Similarity=0.144 Sum_probs=174.3
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.|++|++...... .....+.+|...|.+++|+ + .+|++++.|+.|++|| .++.+..+..|...+.+++|.
T Consensus 81 g~i~~~~~~~~~~~----~~~~~~~~~~~~i~~~~~~--~-~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~ 151 (313)
T 3odt_A 81 TMINGVPLFATSGE----DPLYTLIGHQGNVCSLSFQ--D-GVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVV 151 (313)
T ss_dssp SCEEEEETTCCTTS----CC-CEECCCSSCEEEEEEE--T-TEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEE
T ss_pred CeEEEEEeeecCCC----CcccchhhcccCEEEEEec--C-CEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEc
Confidence 46999999875332 4456778999999999993 4 5999999999999999 678888899999999999999
Q ss_pred C-CCCEEEEEeCCCeEEEEeCCCCceEEEeee-cCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEee
Q psy14130 229 R-DGSRLVTTCKDKTVRVLDPRTGLVISQGVC-HPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALET 306 (494)
Q Consensus 229 ~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~ 306 (494)
| ++.++++++.|+.|++|| .++....+.. |... +..+.|++++ .++ +| +.|+.|++||+++......+
T Consensus 152 ~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~-i~~~~~~~~~-~~~-~~---~~dg~i~i~d~~~~~~~~~~-- 221 (313)
T 3odt_A 152 SFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDV-VRHLAVVDDG-HFI-SC---SNDGLIKLVDMHTGDVLRTY-- 221 (313)
T ss_dssp ETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSC-EEEEEEEETT-EEE-EE---ETTSEEEEEETTTCCEEEEE--
T ss_pred cCCCCEEEEEECCCCEEEEe--cCceEEEEeccCccc-EEEEEEcCCC-eEE-Ec---cCCCeEEEEECCchhhhhhh--
Confidence 8 899999999999999999 4566777776 5555 9999999984 455 44 48999999999876543322
Q ss_pred ecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec-cceeEEEEeeC
Q psy14130 307 VDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ-CEIFRFFKLHT 385 (494)
Q Consensus 307 ~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~-~~~~~~~~l~~ 385 (494)
..+...+.+++|+|++ .| ++++.||.|++||+.+++....+.. +..++.+++|+|++.+++.+ |+.+++|++..
T Consensus 222 ~~~~~~i~~~~~~~~~-~l-~~~~~dg~v~iwd~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~dg~i~iw~~~~ 296 (313)
T 3odt_A 222 EGHESFVYCIKLLPNG-DI-VSCGEDRTVRIWSKENGSLKQVITL---PAISIWSVDCMSNGDIIVGSSDNLVRIFSQEK 296 (313)
T ss_dssp ECCSSCEEEEEECTTS-CE-EEEETTSEEEEECTTTCCEEEEEEC---SSSCEEEEEECTTSCEEEEETTSCEEEEESCG
T ss_pred hcCCceEEEEEEecCC-CE-EEEecCCEEEEEECCCCceeEEEec---cCceEEEEEEccCCCEEEEeCCCcEEEEeCCC
Confidence 2466889999999999 45 7889999999999999987544422 35689999999999866554 99999999987
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-31 Score=255.70 Aligned_cols=177 Identities=20% Similarity=0.348 Sum_probs=152.0
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCC-CCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTA-ENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSF 227 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~-~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~ 227 (494)
++|++||+.++ +.+..+.+|...|.+++|+|+. .++|++|+.|++|++||+++++++..+.+|...|++++|
T Consensus 176 ~~v~lwd~~~~-------~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~ 248 (354)
T 2pbi_B 176 GTCALWDVESG-------QLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRY 248 (354)
T ss_dssp SEEEEEETTTC-------CEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE
T ss_pred CcEEEEeCCCC-------eEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEE
Confidence 47999999988 6778899999999999998852 279999999999999999999999999999999999999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCC-CCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEee
Q psy14130 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPG-TRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALET 306 (494)
Q Consensus 228 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~ 306 (494)
+|++.+|++++.|++|++||+++++.+..+..+.. ..+..+.|+|+ +.++++| +.|+.|++||+.+...... .
T Consensus 249 ~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~-g~~l~~g---~~d~~i~vwd~~~~~~~~~--l 322 (354)
T 2pbi_B 249 YPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLS-GRLLFAG---YNDYTINVWDVLKGSRVSI--L 322 (354)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTT-SSEEEEE---ETTSCEEEEETTTCSEEEE--E
T ss_pred eCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCC-CCEEEEE---ECCCcEEEEECCCCceEEE--E
Confidence 99999999999999999999999887766654432 22678899998 5566666 5899999999987553322 2
Q ss_pred ecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEE
Q psy14130 307 VDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYE 339 (494)
Q Consensus 307 ~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd 339 (494)
..|...|.+++|+|++++| ++|+.||.|++|+
T Consensus 323 ~~h~~~v~~l~~spdg~~l-~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 323 FGHENRVSTLRVSPDGTAF-CSGSWDHTLRVWA 354 (354)
T ss_dssp CCCSSCEEEEEECTTSSCE-EEEETTSEEEEEC
T ss_pred ECCCCcEEEEEECCCCCEE-EEEcCCCCEEecC
Confidence 3577899999999999999 9999999999995
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-31 Score=261.56 Aligned_cols=204 Identities=15% Similarity=0.157 Sum_probs=155.5
Q ss_pred cccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCC-CeEEE-------EecCCCCceEEEEEcCCC-CEEEEEeCCCe
Q psy14130 172 LHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGK-GEALT-------VIDCHPDVINCLSFNRDG-SRLVTTCKDKT 242 (494)
Q Consensus 172 ~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~-~~~~~-------~~~~h~~~v~~l~~~~~~-~~l~s~~~d~~ 242 (494)
+.+|...|.+++|+|++ .+|++| .|+.|++||+.+ ++.+. .+.+|...|++++|+|++ ++|++|+.|+.
T Consensus 173 ~~~h~~~v~~~~~~~~~-~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~ 250 (447)
T 3dw8_B 173 ANAHTYHINSISINSDY-ETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGT 250 (447)
T ss_dssp CSCCSSCCCEEEECTTS-SEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSC
T ss_pred ccCCCcceEEEEEcCCC-CEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCe
Confidence 46899999999999998 799998 799999999984 44444 256899999999999998 99999999999
Q ss_pred EEEEeCCCCce----EEEeeecCC-----------CCceEEEEECCCCeEEEEEecCCCCceEEEEeCCC-CCCceeEee
Q psy14130 243 VRVLDPRTGLV----ISQGVCHPG-----------TRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEND-LNTPLALET 306 (494)
Q Consensus 243 v~iwd~~~~~~----~~~~~~~~~-----------~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~-~~~~~~~~~ 306 (494)
|++||+++++. +..+..|.. ..+..+.|+|++ .++++| +. +.|++||+++ ......+..
T Consensus 251 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~~---~~-~~v~iwd~~~~~~~~~~~~~ 325 (447)
T 3dw8_B 251 IRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSG-RYMMTR---DY-LSVKVWDLNMENRPVETYQV 325 (447)
T ss_dssp EEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTS-SEEEEE---ES-SEEEEEETTCCSSCSCCEES
T ss_pred EEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCC-CEEEEe---eC-CeEEEEeCCCCccccceeec
Confidence 99999999886 788888875 138999999985 455555 35 9999999986 333322322
Q ss_pred ecCCC-------------ceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecc----------------------
Q psy14130 307 VDSSS-------------GVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLN---------------------- 351 (494)
Q Consensus 307 ~~~~~-------------~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~---------------------- 351 (494)
..... .+..++|+|++++| ++|+.||.|++||+.+++.+.....
T Consensus 326 ~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l-~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (447)
T 3dw8_B 326 HEYLRSKLCSLYENDCIFDKFECCWNGSDSVV-MTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRK 404 (447)
T ss_dssp CGGGTTTHHHHHHTSGGGCCCCEEECTTSSEE-EEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCC
T ss_pred cccccccccccccccccccceEEEECCCCCEE-EEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcc
Confidence 11000 12348999999999 9999999999999998875421110
Q ss_pred -------cccCCCCeeEEEEecCCceeeec-cceeEEEEe
Q psy14130 352 -------QSLSGAPQRGLGFMPKRGCDVTQ-CEIFRFFKL 383 (494)
Q Consensus 352 -------~~~~~~~v~~~~~~p~~~~~~~~-~~~~~~~~l 383 (494)
.......|..++|+|++..++++ .+.+.+|.-
T Consensus 405 ~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~~~~~~~ 444 (447)
T 3dw8_B 405 KDEISVDSLDFNKKILHTAWHPKENIIAVATTNNLYIFQD 444 (447)
T ss_dssp TTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSCEEEEEC
T ss_pred cccccccccccCCceeEEEECCCCCEEEEEecceeeeecc
Confidence 11234578999999999988875 556777753
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-31 Score=256.71 Aligned_cols=222 Identities=12% Similarity=0.110 Sum_probs=174.1
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeE----EEEecCCCCceEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEA----LTVIDCHPDVINC 224 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~----~~~~~~h~~~v~~ 224 (494)
+.|++||+.++.. .....+.+|...|.+++|+|++ .+|++++.|+.|++||+..++. .....+|...|.+
T Consensus 74 g~i~vwd~~~~~~-----~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~ 147 (372)
T 1k8k_C 74 RNAYVWTLKGRTW-----KPTLVILRINRAARCVRWAPNE-KKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLS 147 (372)
T ss_dssp SCEEEEEEETTEE-----EEEEECCCCSSCEEEEEECTTS-SEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEE
T ss_pred CeEEEEECCCCee-----eeeEEeecCCCceeEEEECCCC-CEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeE
Confidence 4799999987632 2234457799999999999998 7999999999999999987752 3334678999999
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEeCC------------------CCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCC
Q psy14130 225 LSFNRDGSRLVTTCKDKTVRVLDPR------------------TGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHS 286 (494)
Q Consensus 225 l~~~~~~~~l~s~~~d~~v~iwd~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 286 (494)
++|+|++++|++++.|+.|++||++ .++.+..+..|... +..+.|+|++. ++++| +.
T Consensus 148 ~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~-~l~~~---~~ 222 (372)
T 1k8k_C 148 LDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGW-VHGVCFSANGS-RVAWV---SH 222 (372)
T ss_dssp EEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSC-EEEEEECSSSS-EEEEE---ET
T ss_pred EEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCe-EEEEEECCCCC-EEEEE---eC
Confidence 9999999999999999999999954 67788888888887 99999999855 45555 48
Q ss_pred CceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeC--CCceE-----------------
Q psy14130 287 DRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTN--ERPYI----------------- 347 (494)
Q Consensus 287 d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~--~~~~~----------------- 347 (494)
|+.|++||+++......+ ..+...+.+++|+|+++++ ++| .|+.|++|++.+ ++...
T Consensus 223 d~~i~i~d~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l-~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (372)
T 1k8k_C 223 DSTVCLADADKKMAVATL--ASETLPLLAVTFITESSLV-AAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTA 298 (372)
T ss_dssp TTEEEEEEGGGTTEEEEE--ECSSCCEEEEEEEETTEEE-EEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CH
T ss_pred CCEEEEEECCCCceeEEE--ccCCCCeEEEEEecCCCEE-EEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcch
Confidence 999999999876543332 2355689999999999877 666 999999999998 42000
Q ss_pred -----------E--------ecccccCCCCeeEEEEe-cCC---ceeeec--cceeEEEEeeC
Q psy14130 348 -----------H--------FLNQSLSGAPQRGLGFM-PKR---GCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 348 -----------~--------~~~~~~~~~~v~~~~~~-p~~---~~~~~~--~~~~~~~~l~~ 385 (494)
. ......+..+|.+++|. +++ .+++++ |+.+++|++..
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~ 361 (372)
T 1k8k_C 299 RERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRS 361 (372)
T ss_dssp HHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHH
T ss_pred hhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecC
Confidence 0 00011456789999977 565 677764 99999999876
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-31 Score=282.88 Aligned_cols=211 Identities=10% Similarity=0.066 Sum_probs=133.0
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 82 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~ 82 (494)
.||.+.|++++|+| ++++||+|+.||+|+ +|+........ .... .. .-..++.++.. .+.....++.+.++
T Consensus 14 ~gh~~~V~~lafsp-dg~~lAsgs~Dg~I~-lw~~~~~~~~~--~~~~-~~--~V~~l~fspg~--~L~S~s~D~~v~lW 84 (902)
T 2oaj_A 14 YGMSSKPIAAAFDF-TQNLLAIATVTGEVH-IYGQQQVEVVI--KLED-RS--AIKEMRFVKGI--YLVVINAKDTVYVL 84 (902)
T ss_dssp EECSSCEEEEEEET-TTTEEEEEETTSEEE-EECSTTCEEEE--ECSS-CC--CEEEEEEETTT--EEEEEETTCEEEEE
T ss_pred cCCCCCcEEEEECC-CCCEEEEEeCCCEEE-EEeCCCcEEEE--EcCC-CC--CEEEEEEcCCC--EEEEEECcCeEEEE
Confidence 58999999999999 899999999999999 88754322111 0100 00 00001111111 11222233444443
Q ss_pred eccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCC
Q psy14130 83 PIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLS 162 (494)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~ 162 (494)
.+... .++..+. ....+..+.++|....++... .++.|++||+.++...
T Consensus 85 d~~~~-------------------~~~~~~~---~~~~V~~v~~sp~g~~l~sgs---------~dg~V~lwd~~~~~~~ 133 (902)
T 2oaj_A 85 SLYSQ-------------------KVLTTVF---VPGKITSIDTDASLDWMLIGL---------QNGSMIVYDIDRDQLS 133 (902)
T ss_dssp ETTTC-------------------SEEEEEE---CSSCEEEEECCTTCSEEEEEE---------TTSCEEEEETTTTEEE
T ss_pred ECCCC-------------------cEEEEEc---CCCCEEEEEECCCCCEEEEEc---------CCCcEEEEECCCCccc
Confidence 33210 0011111 011223333443322222222 2347999999877421
Q ss_pred CCccc-----ceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCC------------------C
Q psy14130 163 GNLNE-----WIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCH------------------P 219 (494)
Q Consensus 163 ~~~~~-----~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h------------------~ 219 (494)
.+.. ....+.+|...|.+++|+|++...|++|+.|+.| +||+++++++..+..| .
T Consensus 134 -~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~ 211 (902)
T 2oaj_A 134 -SFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRT 211 (902)
T ss_dssp -EEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBC
T ss_pred -cceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccC
Confidence 0000 0024578999999999999754689999999999 9999999998888766 5
Q ss_pred CceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEE
Q psy14130 220 DVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVIS 255 (494)
Q Consensus 220 ~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~ 255 (494)
..|++++|+|+|++|++++.|++|++||+++++++.
T Consensus 212 ~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~ 247 (902)
T 2oaj_A 212 PKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIM 247 (902)
T ss_dssp CCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEE
T ss_pred CCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEE
Confidence 779999999999999999999999999998877543
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-32 Score=271.18 Aligned_cols=228 Identities=9% Similarity=0.036 Sum_probs=176.9
Q ss_pred CcEEEEEcCCCCCCC----CcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC-eEEEEecCCCCceE
Q psy14130 149 HRVKLWYIPDGGLSG----NLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKG-EALTVIDCHPDVIN 223 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~----~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~-~~~~~~~~h~~~v~ 223 (494)
++|+|||+.++.... ....+...+.+|...|++++|+++ ..|++|+.||+|++||++++ .+...+.+|...|+
T Consensus 235 gtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~--~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~ 312 (524)
T 2j04_B 235 GTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP--TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYIL 312 (524)
T ss_dssp SCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS--SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEE
T ss_pred CeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC--CeEEEEeCCCEEEEEECCCCCCceEEeecccccEE
Confidence 479999998764321 122345678899999999999986 48999999999999999876 35567889999999
Q ss_pred EE--EEcCCC-CEEEEEeCCCeEEEEeCCCCceEEEeeecCCC-CceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCC
Q psy14130 224 CL--SFNRDG-SRLVTTCKDKTVRVLDPRTGLVISQGVCHPGT-RSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLN 299 (494)
Q Consensus 224 ~l--~~~~~~-~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~ 299 (494)
+| +|+|+| .+|+||+.|++|+|||+++++++..+.+|... .+.+++|+|++.. ++++ +.|++|++||+++..
T Consensus 313 sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~-l~s~---~~d~tv~lwd~~~~~ 388 (524)
T 2j04_B 313 SVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYS-YIYS---DGASSLRAVPSRAAF 388 (524)
T ss_dssp EEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTE-EEEE---CSSSEEEEEETTCTT
T ss_pred EEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCe-EEEe---CCCCcEEEEECcccc
Confidence 99 578887 89999999999999999998877777777542 2678999998554 5555 589999999999866
Q ss_pred CceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCc--------------eEEe----------------
Q psy14130 300 TPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERP--------------YIHF---------------- 349 (494)
Q Consensus 300 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~--------------~~~~---------------- 349 (494)
....+. .|...|.+++|+|+++.| ++|+.||+|++||+..... +...
T Consensus 389 ~~~~l~--gH~~~V~sva~Sp~g~~l-~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~ 465 (524)
T 2j04_B 389 AVHPLV--SRETTITAIGVSRLHPMV-LAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYE 465 (524)
T ss_dssp CCEEEE--ECSSCEEEEECCSSCCBC-EEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCC
T ss_pred cceeee--cCCCceEEEEeCCCCCeE-EEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCce
Confidence 544443 477899999999999998 9999999999998643210 0000
Q ss_pred -----------cccccCCCCeeEEEEecCCc---eeeec--cceeEEEEeeC
Q psy14130 350 -----------LNQSLSGAPQRGLGFMPKRG---CDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 350 -----------~~~~~~~~~v~~~~~~p~~~---~~~~~--~~~~~~~~l~~ 385 (494)
..-..+..+|.+++|+|++. .++++ ++.+|||++..
T Consensus 466 ~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~ 517 (524)
T 2j04_B 466 VYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSL 517 (524)
T ss_dssp CCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSC
T ss_pred ecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEccc
Confidence 00012456889999999964 66664 79999999876
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-30 Score=248.85 Aligned_cols=220 Identities=17% Similarity=0.217 Sum_probs=184.5
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecc--cccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe--EEEEecCCCCceE
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLH--GHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE--ALTVIDCHPDVIN 223 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~--~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~--~~~~~~~h~~~v~ 223 (494)
.+.|++|++.++... .....+. +|...|.+++|+|++ ++|++++.|+.|++||+.+++ ....+..|...|.
T Consensus 71 dg~i~iw~~~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~ 145 (337)
T 1gxr_A 71 KGCVKVWDISHPGNK----SPVSQLDCLNRDNYIRSCKLLPDG-CTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACY 145 (337)
T ss_dssp BSEEEEEETTSTTCC----SCSEEEECSCTTSBEEEEEECTTS-SEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEE
T ss_pred CCeEEEEECCCCCce----eeeecccccCCCCcEEEEEEcCCC-CEEEEEcCCCcEEEEECCCCCcceeeecccCCCceE
Confidence 347999999887533 2223333 799999999999998 799999999999999999887 6677888999999
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCcee
Q psy14130 224 CLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLA 303 (494)
Q Consensus 224 ~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~ 303 (494)
+++|+|++++|++++.|+.|++||+++++.+..+..|... +..+.|+|++..+++++ .|+.|++||+++...
T Consensus 146 ~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~-i~~~~~~~~~~~l~~~~----~dg~i~~~d~~~~~~--- 217 (337)
T 1gxr_A 146 ALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDG-ASCIDISNDGTKLWTGG----LDNTVRSWDLREGRQ--- 217 (337)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC-EEEEEECTTSSEEEEEE----TTSEEEEEETTTTEE---
T ss_pred EEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCc-eEEEEECCCCCEEEEEe----cCCcEEEEECCCCce---
Confidence 9999999999999999999999999999999999988887 99999999855555544 899999999987543
Q ss_pred EeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEE
Q psy14130 304 LETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFF 381 (494)
Q Consensus 304 ~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~ 381 (494)
.....+...+.+++|+|+++.+ ++++.|+.|++||+.+++.. .. ..+..++.+++|+|++.+++++ ++.+++|
T Consensus 218 ~~~~~~~~~v~~~~~s~~~~~l-~~~~~~~~i~~~~~~~~~~~-~~---~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~ 292 (337)
T 1gxr_A 218 LQQHDFTSQIFSLGYCPTGEWL-AVGMESSNVEVLHVNKPDKY-QL---HLHESCVLSLKFAYCGKWFVSTGKDNLLNAW 292 (337)
T ss_dssp EEEEECSSCEEEEEECTTSSEE-EEEETTSCEEEEETTSSCEE-EE---CCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred EeeecCCCceEEEEECCCCCEE-EEEcCCCcEEEEECCCCCeE-EE---cCCccceeEEEECCCCCEEEEecCCCcEEEE
Confidence 2334466789999999999998 88889999999999988752 22 2346789999999999988775 8999999
Q ss_pred EeeC
Q psy14130 382 KLHT 385 (494)
Q Consensus 382 ~l~~ 385 (494)
++..
T Consensus 293 ~~~~ 296 (337)
T 1gxr_A 293 RTPY 296 (337)
T ss_dssp ETTT
T ss_pred ECCC
Confidence 9987
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-31 Score=252.73 Aligned_cols=183 Identities=21% Similarity=0.336 Sum_probs=141.5
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC--eEEEEecCCCCceEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKG--EALTVIDCHPDVINCLS 226 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~--~~~~~~~~h~~~v~~l~ 226 (494)
++|+|||+...... .+.+..+.+|...|.+++|+|++ .+|++|+.|++|++||..++ +++..+.+|.+.|.+++
T Consensus 129 ~~v~iwd~~~~~~~---~~~~~~~~~h~~~v~~v~~~p~~-~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~ 204 (330)
T 2hes_X 129 KSVWIWETDESGEE---YECISVLQEHSQDVKHVIWHPSE-ALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSD 204 (330)
T ss_dssp SCEEEEECCTTCCC---CEEEEEECCCSSCEEEEEECSSS-SEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEE
T ss_pred CEEEEEeccCCCCC---eEEEEEeccCCCceEEEEECCCC-CEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEE
Confidence 47999999543211 14567788999999999999998 79999999999999999776 67888999999999999
Q ss_pred EcCC--CCEEEEEeCCCeEEEEeCCCC--------ceEEEeee-cCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeC
Q psy14130 227 FNRD--GSRLVTTCKDKTVRVLDPRTG--------LVISQGVC-HPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDE 295 (494)
Q Consensus 227 ~~~~--~~~l~s~~~d~~v~iwd~~~~--------~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~ 295 (494)
|+|+ +.+|++++.|++|++||++.+ .+...+.. |... +..++|+++ +.++++| .|+.|++||.
T Consensus 205 ~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~-v~~v~~s~~-~~l~s~~----~dg~v~iw~~ 278 (330)
T 2hes_X 205 FDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQ-VYNVAWGFN-GLIASVG----ADGVLAVYEE 278 (330)
T ss_dssp ECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSC-EEEEEECTT-SCEEEEE----TTSCEEEEEE
T ss_pred ecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccc-eEEEEEcCC-CEEEEEe----CCCEEEEEEc
Confidence 9998 779999999999999998764 33444444 6666 899999865 5555555 8999999998
Q ss_pred CCCCCceeEee-ecCCC-ceEEeEEeC--CCCEEEEEEeCCCcEEEEEeeC
Q psy14130 296 NDLNTPLALET-VDSSS-GVLFPYYDH--DTRILFLAGKGDGNIRYYELTN 342 (494)
Q Consensus 296 ~~~~~~~~~~~-~~~~~-~v~~~~~~~--~~~~l~~~g~~dg~i~~wd~~~ 342 (494)
.+......... ..|.. .+.+++|+| ++++| ++|+.||.|++||++.
T Consensus 279 ~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~l-as~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 279 VDGEWKVFAKRALCHGVYEINVVKWLELNGKTIL-ATGGDDGIVNFWSLEK 328 (330)
T ss_dssp ETTEEEEEEEESCTTTTSCEEEEEEC-----CCE-EEEETTSEEEEEEC--
T ss_pred CCCceEEEeccccccccceEEEEEEecCCCceEE-EEecCCCcEEEEEecc
Confidence 75421111111 23444 799999999 67777 9999999999999865
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-32 Score=262.47 Aligned_cols=180 Identities=14% Similarity=0.149 Sum_probs=136.4
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe---EEEEecC-CCCceEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE---ALTVIDC-HPDVINC 224 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~---~~~~~~~-h~~~v~~ 224 (494)
+.|++||+.++... .+...+.+|...|.+++|+|++ ++|++|+.|+.|++||+++++ ....+.. |...|++
T Consensus 77 ~~v~vwd~~~~~~~----~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~ 151 (377)
T 3dwl_C 77 RNAYVYEKRPDGTW----KQTLVLLRLNRAATFVRWSPNE-DKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILS 151 (377)
T ss_dssp SSEEEC------CC----CCEEECCCCSSCEEEEECCTTS-SCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEE
T ss_pred CeEEEEEcCCCCce----eeeeEecccCCceEEEEECCCC-CEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEE
Confidence 47999999987411 3566788899999999999998 799999999999999999887 3677877 9999999
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEeCC------------------CCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCC
Q psy14130 225 LSFNRDGSRLVTTCKDKTVRVLDPR------------------TGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHS 286 (494)
Q Consensus 225 l~~~~~~~~l~s~~~d~~v~iwd~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 286 (494)
++|+|++++|++++.|+.|++||++ .++++..+ .|... +..++|+|++..+++++ .
T Consensus 152 ~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-v~~~~~sp~~~~l~~~~----~ 225 (377)
T 3dwl_C 152 LDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGW-VHAVGFSPSGNALAYAG----H 225 (377)
T ss_dssp EEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSS-EEEEEECTTSSCEEEEE----T
T ss_pred EEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCce-EEEEEECCCCCEEEEEe----C
Confidence 9999999999999999999999985 34466666 77777 99999999955455444 8
Q ss_pred CceEEEEeCCCCCCcee--EeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEee
Q psy14130 287 DRQVGLWDENDLNTPLA--LETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELT 341 (494)
Q Consensus 287 d~~i~iwd~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~ 341 (494)
|+.|++||+++...+.. .....+...+.+++|+|++++| ++|+.|+.+ +|+..
T Consensus 226 d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 226 DSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIV-AAGYNYSPI-LLQGN 280 (377)
T ss_dssp TTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEE-EEESSSSEE-EECCC
T ss_pred CCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEE-EEEcCCcEE-EEEeC
Confidence 99999999998765221 1222466789999999999888 777655555 66665
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-30 Score=277.55 Aligned_cols=219 Identities=19% Similarity=0.277 Sum_probs=184.3
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC-eEEEEecCCCCceEEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKG-EALTVIDCHPDVINCLSF 227 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~-~~~~~~~~h~~~v~~l~~ 227 (494)
+.|++||+.++ +.+..+.+|...|.+++|+|++ .+|++++.||+|++||+.++ .....+.+|...|.+++|
T Consensus 77 g~i~vw~~~~~-------~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~ 148 (814)
T 3mkq_A 77 FRIRVFNYNTG-------EKVVDFEAHPDYIRSIAVHPTK-PYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAF 148 (814)
T ss_dssp SEEEEEETTTC-------CEEEEEECCSSCEEEEEECSSS-SEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEE
T ss_pred CeEEEEECCCC-------cEEEEEecCCCCEEEEEEeCCC-CEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEE
Confidence 47999999988 6777889999999999999998 69999999999999999887 677888999999999999
Q ss_pred cC-CCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEEC--CCCeEEEEEecCCCCceEEEEeCCCCCCceeE
Q psy14130 228 NR-DGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIG--DTGRIVTTGFSRHSDRQVGLWDENDLNTPLAL 304 (494)
Q Consensus 228 ~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~ 304 (494)
+| ++..|++++.|+.|++||+++++....+..+....+..+.|+| + +.++++| +.|+.|++||+++......+
T Consensus 149 ~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~l~~~---~~dg~i~~~d~~~~~~~~~~ 224 (814)
T 3mkq_A 149 NPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPD-KPYMITA---SDDLTIKIWDYQTKSCVATL 224 (814)
T ss_dssp ETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTT-CCEEEEE---CTTSEEEEEETTTTEEEEEE
T ss_pred EcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCC-CCEEEEE---eCCCEEEEEECCCCcEEEEE
Confidence 99 8899999999999999999998887777777644489999998 6 5566666 68999999999875432222
Q ss_pred eeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCc--eeee-ccceeEEE
Q psy14130 305 ETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRG--CDVT-QCEIFRFF 381 (494)
Q Consensus 305 ~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~--~~~~-~~~~~~~~ 381 (494)
..+...+.+++|+|+++.+ ++|+.||.|++||+.+++....+.. +..++.+++|+|++. ++++ .++.+.+|
T Consensus 225 --~~~~~~v~~~~~~~~~~~l-~~~~~dg~v~vwd~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (814)
T 3mkq_A 225 --EGHMSNVSFAVFHPTLPII-ISGSEDGTLKIWNSSTYKVEKTLNV---GLERSWCIATHPTGRKNYIASGFDNGFTVL 298 (814)
T ss_dssp --ECCSSCEEEEEECSSSSEE-EEEETTSCEEEEETTTCSEEEEECC---SSSSEEEEEECTTCGGGEEEEEETTEEEEE
T ss_pred --cCCCCCEEEEEEcCCCCEE-EEEeCCCeEEEEECCCCcEEEEeec---CCCcEEEEEEccCCCceEEEEEeCCCEEEE
Confidence 2366789999999999988 8999999999999999886544432 256899999999986 2444 48888899
Q ss_pred EeeC
Q psy14130 382 KLHT 385 (494)
Q Consensus 382 ~l~~ 385 (494)
++..
T Consensus 299 ~~~~ 302 (814)
T 3mkq_A 299 SLGN 302 (814)
T ss_dssp ECSC
T ss_pred EcCC
Confidence 8765
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-30 Score=290.72 Aligned_cols=329 Identities=17% Similarity=0.237 Sum_probs=230.6
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 82 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~ 82 (494)
+||.+.|++++|+| ++++|+||+.||+|+ +|+....+.. ..+..... .-..++.+++...++. ...++.+.++
T Consensus 612 ~~h~~~v~~~~~s~-~~~~l~s~~~d~~i~-vw~~~~~~~~--~~~~~h~~--~v~~~~~s~~~~~l~s-~~~d~~v~vw 684 (1249)
T 3sfz_A 612 RPHTDAVYHACFSQ-DGQRIASCGADKTLQ-VFKAETGEKL--LDIKAHED--EVLCCAFSSDDSYIAT-CSADKKVKIW 684 (1249)
T ss_dssp CCCSSCEEEEEECT-TSSEEEEEETTSCEE-EEETTTCCEE--EEECCCSS--CEEEEEECTTSSEEEE-EETTSEEEEE
T ss_pred ecccccEEEEEECC-CCCEEEEEeCCCeEE-EEECCCCCEE--EEeccCCC--CEEEEEEecCCCEEEE-EeCCCeEEEE
Confidence 58999999999999 899999999999999 8886544321 11111000 0011122222221111 2233444444
Q ss_pred eccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEE--EcCcEEEEEcCCCC
Q psy14130 83 PIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL--PIHRVKLWYIPDGG 160 (494)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~v~iw~~~~~~ 160 (494)
.+... +.. ..+. ........+.+++ .+++.+++. .++.|++||+.++
T Consensus 685 d~~~~------~~~-------------~~~~--~~~~~v~~~~~~~---------~~~~~~l~sg~~d~~v~vwd~~~~- 733 (1249)
T 3sfz_A 685 DSATG------KLV-------------HTYD--EHSEQVNCCHFTN---------KSNHLLLATGSNDFFLKLWDLNQK- 733 (1249)
T ss_dssp ETTTC------CEE-------------EEEE--CCSSCEEEEEECS---------SSSCCEEEEEETTSCEEEEETTSS-
T ss_pred ECCCC------ceE-------------EEEc--CCCCcEEEEEEec---------CCCceEEEEEeCCCeEEEEECCCc-
Confidence 43211 000 0110 1112222333333 111112111 1247999999988
Q ss_pred CCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEe-------------------------
Q psy14130 161 LSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVI------------------------- 215 (494)
Q Consensus 161 ~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~------------------------- 215 (494)
.....+.+|...|.+++|+|++ .+|++++.||+|++||+.+++....+
T Consensus 734 ------~~~~~~~~h~~~v~~~~~sp~~-~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 806 (1249)
T 3sfz_A 734 ------ECRNTMFGHTNSVNHCRFSPDD-ELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSW 806 (1249)
T ss_dssp ------SEEEEECCCSSCEEEEEECSST-TEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCB
T ss_pred ------chhheecCCCCCEEEEEEecCC-CEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEE
Confidence 6778889999999999999998 79999999999999999776544332
Q ss_pred ------------------------------cCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCc
Q psy14130 216 ------------------------------DCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRS 265 (494)
Q Consensus 216 ------------------------------~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~ 265 (494)
.+|...|.+++|+|+++++++++.|+.|++||+.++..+..+.+|... +
T Consensus 807 s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~-v 885 (1249)
T 3sfz_A 807 SADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSW-V 885 (1249)
T ss_dssp CTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSC-E
T ss_pred CCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccc-e
Confidence 167788999999999999999999999999999999999999999988 9
Q ss_pred eEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCc----------------------------eeE-------eeecCC
Q psy14130 266 SKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTP----------------------------LAL-------ETVDSS 310 (494)
Q Consensus 266 ~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~----------------------------~~~-------~~~~~~ 310 (494)
..+.|+|++..+++++ .|+.|++||+.+.... ... ......
T Consensus 886 ~~v~~spdg~~l~s~s----~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 961 (1249)
T 3sfz_A 886 HGVMFSPDGSSFLTAS----DDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPE 961 (1249)
T ss_dssp EEEEECTTSSEEEEEE----TTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECC
T ss_pred EEEEECCCCCEEEEEe----CCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEccc
Confidence 9999999865555555 8999999996531100 000 001123
Q ss_pred CceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 311 SGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 311 ~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
..+.+++|+|+++++ ++|+.||.|++||+.+++...... .+...|.+++|+|++..++++ |+.+++|++..
T Consensus 962 ~~i~~~~~sp~g~~l-~~g~~~g~i~i~d~~~~~~~~~~~---~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~ 1034 (1249)
T 3sfz_A 962 AQVSCCCLSPHLEYV-AFGDEDGAIKIIELPNNRVFSSGV---GHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQT 1034 (1249)
T ss_dssp SCEEEEEECTTSSEE-EEEETTSCCEEEETTTTSCEEECC---CCSSCCCCEEECSSSSCEEEECSSSBEEEEETTT
T ss_pred CcEEEEEEcCCCCEE-EEEcCCCCEEEEEcCCCceeeecc---cCCCceEEEEECCCCCEEEEEcCCCEEEEEECCC
Confidence 568899999999998 899999999999999988654332 346789999999999988875 89999999876
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=99.98 E-value=1.4e-29 Score=239.23 Aligned_cols=221 Identities=20% Similarity=0.357 Sum_probs=183.8
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.|++|++.++ +....+.+|...|.+++|+|++ ++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+
T Consensus 45 g~i~iw~~~~~-------~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~ 116 (312)
T 4ery_A 45 KLIKIWGAYDG-------KFEKTISGHKLGISDVAWSSDS-NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFN 116 (312)
T ss_dssp SCEEEEETTTC-------CEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEC
T ss_pred CeEEEEeCCCc-------ccchhhccCCCceEEEEEcCCC-CEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEc
Confidence 47999999887 5667888999999999999998 799999999999999999999999999999999999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD 308 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~ 308 (494)
|++++|++++.|+.|++||+++++.+..+..|... +..+.|++++. ++++| +.|+.|++||+++...... ....
T Consensus 117 ~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~-~l~~~---~~d~~i~~wd~~~~~~~~~-~~~~ 190 (312)
T 4ery_A 117 PQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDP-VSAVHFNRDGS-LIVSS---SYDGLCRIWDTASGQCLKT-LIDD 190 (312)
T ss_dssp SSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSC-EEEEEECTTSS-EEEEE---ETTSCEEEEETTTCCEEEE-ECCS
T ss_pred CCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCc-EEEEEEcCCCC-EEEEE---eCCCcEEEEECCCCceeeE-Eecc
Confidence 99999999999999999999999999999999887 89999999854 55555 4899999999987543222 2223
Q ss_pred CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEe-cCCceeeec--cceeEEEEeeC
Q psy14130 309 SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFM-PKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 309 ~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~-p~~~~~~~~--~~~~~~~~l~~ 385 (494)
+...+..++|+|++++| ++++.||.|++||+++++.+..+.. +..........++ +++.+++++ |+.+++|++..
T Consensus 191 ~~~~~~~~~~~~~~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~ 268 (312)
T 4ery_A 191 DNPPVSFVKFSPNGKYI-LAATLDNTLKLWDYSKGKCLKTYTG-HKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT 268 (312)
T ss_dssp SCCCEEEEEECTTSSEE-EEEETTTEEEEEETTTTEEEEEECS-SCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTT
T ss_pred CCCceEEEEECCCCCEE-EEEcCCCeEEEEECCCCcEEEEEEe-cCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCC
Confidence 45678899999999999 8899999999999999887544432 2222222333444 567777765 88999999987
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=99.98 E-value=6.7e-30 Score=253.88 Aligned_cols=216 Identities=19% Similarity=0.353 Sum_probs=178.3
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEE
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSF 227 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~ 227 (494)
++.|++||+.++ +.+..+.+|...|.+++| ++ .++++|+.|+.|++||+++++.+..+.+|...|.+++|
T Consensus 218 dg~i~~wd~~~~-------~~~~~~~~~~~~v~~~~~--~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 287 (445)
T 2ovr_B 218 DATLRVWDIETG-------QCLHVLMGHVAAVRCVQY--DG-RRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF 287 (445)
T ss_dssp TSEEEEEESSSC-------CEEEEEECCSSCEEEEEE--CS-SCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE
T ss_pred CCEEEEEECCCC-------cEEEEEcCCcccEEEEEE--CC-CEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE
Confidence 347999999988 677788899999999999 44 68999999999999999999999999999999999999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee
Q psy14130 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV 307 (494)
Q Consensus 228 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~ 307 (494)
++.++++++.|+.|++||+++++.+..+.+|... +..+.+.+ .++++| +.|+.|++||+++......+...
T Consensus 288 --~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-v~~~~~~~---~~l~~~---~~dg~i~vwd~~~~~~~~~~~~~ 358 (445)
T 2ovr_B 288 --DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSL-TSGMELKD---NILVSG---NADSTVKIWDIKTGQCLQTLQGP 358 (445)
T ss_dssp --CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSC-EEEEEEET---TEEEEE---ETTSCEEEEETTTCCEEEEECST
T ss_pred --CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCccc-EEEEEEeC---CEEEEE---eCCCeEEEEECCCCcEEEEEccC
Confidence 7899999999999999999999999999999876 67666643 355555 58999999999876543333221
Q ss_pred -cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEec--ccccCCCCeeEEEEecCCceeeec--cce----e
Q psy14130 308 -DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFL--NQSLSGAPQRGLGFMPKRGCDVTQ--CEI----F 378 (494)
Q Consensus 308 -~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~--~~~~~~~~v~~~~~~p~~~~~~~~--~~~----~ 378 (494)
.+...|.+++|+ +++| ++|+.||.|++||+.+++.+..+. ....+..+|.+++|+|++.+++++ |+. +
T Consensus 359 ~~~~~~v~~~~~~--~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l 435 (445)
T 2ovr_B 359 NKHQSAVTCLQFN--KNFV-ITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKL 435 (445)
T ss_dssp TSCSSCEEEEEEC--SSEE-EEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEE
T ss_pred CCCCCCEEEEEEC--CCEE-EEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEE
Confidence 255788999885 4666 899999999999999998765552 223456889999999999988775 665 8
Q ss_pred EEEEeeC
Q psy14130 379 RFFKLHT 385 (494)
Q Consensus 379 ~~~~l~~ 385 (494)
.+|++..
T Consensus 436 ~v~df~~ 442 (445)
T 2ovr_B 436 LVLDFDV 442 (445)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 8898876
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=99.98 E-value=1.4e-29 Score=242.53 Aligned_cols=224 Identities=15% Similarity=0.194 Sum_probs=180.4
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
++|+|||+.+.........+...+.+|...|.+++|+|++ .+|++|+.|++|++||+++++.+..+.+|...|.+++|+
T Consensus 49 ~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~-~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~s 127 (343)
T 2xzm_R 49 KTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQEN-CFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFS 127 (343)
T ss_dssp SCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSST-TEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEEC
T ss_pred CEEEEEECCcCCcccccccccchhccCCCceEEEEECCCC-CEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEEC
Confidence 4799999987643333335667889999999999999998 799999999999999999999999999999999999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceEEEee---ecCCCCceEEEEECCCC---------eEEEEEecCCCCceEEEEeCC
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGLVISQGV---CHPGTRSSKAVFIGDTG---------RIVTTGFSRHSDRQVGLWDEN 296 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~---------~l~~~g~~~~~d~~i~iwd~~ 296 (494)
|++++|++++.|++|++||+.. ....... .|... +..+.|+|++. .++++| +.|+.|++||..
T Consensus 128 p~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~~~~l~s~---~~d~~i~iwd~~ 202 (343)
T 2xzm_R 128 PDNRQILSAGAEREIKLWNILG-ECKFSSAEKENHSDW-VSCVRYSPIMKSANKVQPFAPYFASV---GWDGRLKVWNTN 202 (343)
T ss_dssp SSTTEEEEEETTSCEEEEESSS-CEEEECCTTTSCSSC-EEEEEECCCCCSCSCCCSSCCEEEEE---ETTSEEEEEETT
T ss_pred CCCCEEEEEcCCCEEEEEeccC-CceeeeecccCCCce-eeeeeeccccccccccCCCCCEEEEE---cCCCEEEEEcCC
Confidence 9999999999999999999984 3333333 56666 88999998752 456666 589999999943
Q ss_pred CCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec-c
Q psy14130 297 DLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ-C 375 (494)
Q Consensus 297 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~-~ 375 (494)
. . .......|...|.+++|+|++++| ++|+.||.|++||+......... +.....|.+++|+|++.+++++ +
T Consensus 203 ~-~--~~~~~~~h~~~v~~~~~s~~g~~l-~sgs~dg~v~iwd~~~~~~~~~~---~~~~~~v~~v~~sp~~~~la~~~d 275 (343)
T 2xzm_R 203 F-Q--IRYTFKAHESNVNHLSISPNGKYI-ATGGKDKKLLIWDILNLTYPQRE---FDAGSTINQIAFNPKLQWVAVGTD 275 (343)
T ss_dssp T-E--EEEEEECCSSCEEEEEECTTSSEE-EEEETTCEEEEEESSCCSSCSEE---EECSSCEEEEEECSSSCEEEEEES
T ss_pred C-c--eeEEEcCccccceEEEECCCCCEE-EEEcCCCeEEEEECCCCccccee---ecCCCcEEEEEECCCCCEEEEECC
Confidence 2 2 222233567889999999999998 99999999999999543322222 2234679999999999887765 8
Q ss_pred ceeEEEEeeC
Q psy14130 376 EIFRFFKLHT 385 (494)
Q Consensus 376 ~~~~~~~l~~ 385 (494)
+.+++|++.+
T Consensus 276 ~~v~iw~~~~ 285 (343)
T 2xzm_R 276 QGVKIFNLMT 285 (343)
T ss_dssp SCEEEEESSS
T ss_pred CCEEEEEeCC
Confidence 8999999876
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=99.98 E-value=5.3e-29 Score=257.45 Aligned_cols=217 Identities=19% Similarity=0.192 Sum_probs=171.9
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccc---cEEEEEEcCC-CCCEEEEEeCCCeEEEEECCCCeEEEEe-c---CCCC
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKR---RVGYIEWHPT-AENVVASAGFDYLIILWDVGKGEALTVI-D---CHPD 220 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~---~V~~~~~~p~-~~~~l~s~s~d~~v~iwd~~~~~~~~~~-~---~h~~ 220 (494)
+.|++||+.++ +.+..+.+|.. .|.+++|+|+ + .+|++++.|+.|++||+.+++.+..+ . .|..
T Consensus 183 ~~v~vwd~~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 254 (615)
T 1pgu_A 183 GSVVFYQGPPF-------KFSASDRTHHKQGSFVRDVEFSPDSG-EFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQG 254 (615)
T ss_dssp TEEEEEETTTB-------EEEEEECSSSCTTCCEEEEEECSTTC-CEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCS
T ss_pred CcEEEEeCCCc-------ceeeeecccCCCCceEEEEEECCCCC-CEEEEEeCCCeEEEEECCCCCEeEEecccccccCC
Confidence 47999999887 67788889999 9999999999 7 79999999999999999999999998 6 8999
Q ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeec----------------------------------------
Q psy14130 221 VINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCH---------------------------------------- 260 (494)
Q Consensus 221 ~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~---------------------------------------- 260 (494)
.|.+++|+ ++++|++++.|+.|++||+++++.+..+..+
T Consensus 255 ~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~ 333 (615)
T 1pgu_A 255 GIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLK 333 (615)
T ss_dssp CEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEE
T ss_pred ceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEE
Confidence 99999999 9999999999999999999876543332221
Q ss_pred --------------------------------------------------------------------------------
Q psy14130 261 -------------------------------------------------------------------------------- 260 (494)
Q Consensus 261 -------------------------------------------------------------------------------- 260 (494)
T Consensus 334 ~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~ 413 (615)
T 1pgu_A 334 TISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVAS 413 (615)
T ss_dssp EECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEE
T ss_pred EEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEE
Confidence
Q ss_pred --------------------------------------------------------------------------CCCCce
Q psy14130 261 --------------------------------------------------------------------------PGTRSS 266 (494)
Q Consensus 261 --------------------------------------------------------------------------~~~~~~ 266 (494)
... +.
T Consensus 414 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~-v~ 492 (615)
T 1pgu_A 414 ANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAK-PS 492 (615)
T ss_dssp ECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSC-EE
T ss_pred EcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCc-eE
Confidence 111 44
Q ss_pred EEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec-CCCceEEeEEeC----------CCCEEEEEEeCCCcE
Q psy14130 267 KAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD-SSSGVLFPYYDH----------DTRILFLAGKGDGNI 335 (494)
Q Consensus 267 ~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~v~~~~~~~----------~~~~l~~~g~~dg~i 335 (494)
.++|+|++ .++++| +.|+.|++||+.+...... ... |...|.+++|+| ++++| ++|+.||.|
T Consensus 493 ~~~~s~~g-~~l~~~---~~dg~i~iw~~~~~~~~~~--~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l-~~~~~dg~i 565 (615)
T 1pgu_A 493 YISISPSE-TYIAAG---DVMGKILLYDLQSREVKTS--RWAFRTSKINAISWKPAEKGANEEEIEEDLV-ATGSLDTNI 565 (615)
T ss_dssp EEEECTTS-SEEEEE---ETTSCEEEEETTTTEEEEC--CSCCCSSCEEEEEECCCC------CCSCCEE-EEEETTSCE
T ss_pred EEEECCCC-CEEEEc---CCCCeEEEeeCCCCcceeE--eecCCCCceeEEEEcCccccccccccCCCEE-EEEcCCCcE
Confidence 55666663 444444 4788888888776433211 122 668899999999 99998 999999999
Q ss_pred EEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 336 RYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 336 ~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
++||+.++......+.. +...|.+++|+|++. ++++ |+.+++|++..
T Consensus 566 ~iw~~~~~~~~~~~~~~--h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 566 FIYSVKRPMKIIKALNA--HKDGVNNLLWETPST-LVSSGADACIKRWNVVL 614 (615)
T ss_dssp EEEESSCTTCCEEETTS--STTCEEEEEEEETTE-EEEEETTSCEEEEEEC-
T ss_pred EEEECCCCceechhhhc--CccceEEEEEcCCCC-eEEecCCceEEEEeeec
Confidence 99999998332343333 367899999999999 7664 89999999865
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=99.98 E-value=1.3e-29 Score=242.05 Aligned_cols=182 Identities=18% Similarity=0.261 Sum_probs=151.3
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCC-CEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAE-NVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSF 227 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~-~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~ 227 (494)
+.+++||+.... .....+.+|...|.+++|++++. .++++++.|+.|++||+.+++.+..+.+|.+.|++++|
T Consensus 150 ~~~~~~d~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~ 223 (340)
T 4aow_A 150 KTIKLWNTLGVC------KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTV 223 (340)
T ss_dssp SCEEEECTTSCE------EEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred CeEEEEEeCCCc------eEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEE
Confidence 369999987652 33455678999999999998753 47899999999999999999999999999999999999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeE---
Q psy14130 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLAL--- 304 (494)
Q Consensus 228 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~--- 304 (494)
+|++++|++|+.|+.|++||+++++.+..+..+.. +..+.|+|+ +.+++++ .|+.|++||+++.......
T Consensus 224 s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~--v~~~~~~~~-~~~~~~~----~d~~i~iwd~~~~~~~~~~~~~ 296 (340)
T 4aow_A 224 SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDI--INALCFSPN-RYWLCAA----TGPSIKIWDLEGKIIVDELKQE 296 (340)
T ss_dssp CTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSC--EEEEEECSS-SSEEEEE----ETTEEEEEETTTTEEEEEECCC
T ss_pred CCCCCEEEEEeCCCeEEEEEeccCceeeeecCCce--EEeeecCCC-Cceeecc----CCCEEEEEECCCCeEEEecccc
Confidence 99999999999999999999999999888876643 788888887 6777777 7999999999864321111
Q ss_pred ----eeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCC
Q psy14130 305 ----ETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNER 344 (494)
Q Consensus 305 ----~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~ 344 (494)
....+...|.+++|+|++++| ++|+.||.|++||+++|+
T Consensus 297 ~~~~~~~~h~~~v~~l~~s~dg~~l-~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 297 VISTSSKAEPPQCTSLAWSADGQTL-FAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp -------CCCCCEEEEEECTTSSEE-EEEETTSCEEEEEEEC--
T ss_pred ceeeeccCCCCCEEEEEECCCCCEE-EEEeCCCEEEEEeCCCcC
Confidence 112456789999999999998 899999999999999985
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=99.97 E-value=4.7e-29 Score=245.78 Aligned_cols=219 Identities=18% Similarity=0.297 Sum_probs=184.6
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC-eEEEEecCCCCceEEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKG-EALTVIDCHPDVINCLSF 227 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~-~~~~~~~~h~~~v~~l~~ 227 (494)
+.|+|||+.++ +.+..+.+|...|.++++++ .+|++|+.|+.+++||.... ..+..+.+|...+..+.|
T Consensus 169 g~v~iWd~~~~-------~~~~~~~~h~~~v~~~s~~~---~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~ 238 (420)
T 4gga_A 169 AEVQLWDVQQQ-------KRLRNMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRW 238 (420)
T ss_dssp SCEEEEETTTT-------EEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEE
T ss_pred CeEEEEEcCCC-------cEEEEEeCCCCceEEEeeCC---CEEEEEeCCCceeEeeecccceeeEEecccccceeeeee
Confidence 47999999988 77888999999999998864 58999999999999998864 466788999999999999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCc----eEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCcee
Q psy14130 228 NRDGSRLVTTCKDKTVRVLDPRTGL----VISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLA 303 (494)
Q Consensus 228 ~~~~~~l~s~~~d~~v~iwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~ 303 (494)
+|+++++++++.|+.+++||..+++ .+.....|... +..++|+|.+..+++++ +++.|+.|++||++++..
T Consensus 239 ~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~-V~~~~~~p~~~~~la~~-~gs~D~~I~iwd~~t~~~--- 313 (420)
T 4gga_A 239 APDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGA-VKAVAWCPWQSNVLATG-GGTSDRHIRIWNVCSGAC--- 313 (420)
T ss_dssp CTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSC-EEEEEECTTCTTEEEEE-ECTTTCEEEEEETTTTEE---
T ss_pred cCCCCeeeeeeccccceEEeeccccccceeeeeecccCCc-eeeeeeCCCcccEEEEE-eecCCCEEEEEeCCcccc---
Confidence 9999999999999999999998876 34566777777 89999999988888764 226799999999987644
Q ss_pred EeeecCCCceEEeEEeCCCCEEEEE-EeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEE
Q psy14130 304 LETVDSSSGVLFPYYDHDTRILFLA-GKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRF 380 (494)
Q Consensus 304 ~~~~~~~~~v~~~~~~~~~~~l~~~-g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~ 380 (494)
...+.....+.++.|+|+++.++++ |+.|+.|++||+.+++++..+. . |..+|.+++|+|++.+++++ |+.+|+
T Consensus 314 ~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~-g--H~~~V~~l~~spdg~~l~S~s~D~tvri 390 (420)
T 4gga_A 314 LSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELK-G--HTSRVLSLTMSPDGATVASAAADETLRL 390 (420)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEEC-C--CSSCEEEEEECTTSSCEEEEETTTEEEE
T ss_pred ceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEc-C--CCCCEEEEEEcCCCCEEEEEecCCeEEE
Confidence 3334466789999999999998544 3379999999999998865543 3 46789999999999988875 999999
Q ss_pred EEeeC
Q psy14130 381 FKLHT 385 (494)
Q Consensus 381 ~~l~~ 385 (494)
|++..
T Consensus 391 Wdv~~ 395 (420)
T 4gga_A 391 WRCFE 395 (420)
T ss_dssp ECCSC
T ss_pred EECCC
Confidence 99876
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.5e-29 Score=242.71 Aligned_cols=221 Identities=15% Similarity=0.117 Sum_probs=170.0
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCC--CEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEE
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAE--NVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCL 225 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~--~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l 225 (494)
++.|++||+.++ +....+. +...+.++.|+|.+. .++++++.|+.|++||+.+++.+..+.+|...|.++
T Consensus 121 d~~i~iwd~~~~-------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~ 192 (408)
T 4a11_B 121 DKTLKVWDTNTL-------QTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAV 192 (408)
T ss_dssp TSEEEEEETTTT-------EEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEE
T ss_pred CCeEEEeeCCCC-------ccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEE
Confidence 347999999987 5555554 788899999998642 499999999999999999999999999999999999
Q ss_pred EEcCCCC-EEEEEeCCCeEEEEeCCCCc-eEEEe---------------eecCCCCceEEEEECCCCeEEEEEecCCCCc
Q psy14130 226 SFNRDGS-RLVTTCKDKTVRVLDPRTGL-VISQG---------------VCHPGTRSSKAVFIGDTGRIVTTGFSRHSDR 288 (494)
Q Consensus 226 ~~~~~~~-~l~s~~~d~~v~iwd~~~~~-~~~~~---------------~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~ 288 (494)
+|+|+++ +|++++.|+.|++||++++. .+..+ ..|... +..++|+|++..+++++ .|+
T Consensus 193 ~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~----~dg 267 (408)
T 4a11_B 193 SWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGK-VNGLCFTSDGLHLLTVG----TDN 267 (408)
T ss_dssp EECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSC-EEEEEECTTSSEEEEEE----TTS
T ss_pred EECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCc-eeEEEEcCCCCEEEEec----CCC
Confidence 9999998 69999999999999998876 44444 456666 89999999855555544 899
Q ss_pred eEEEEeCCCCCCceeEeeec---CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEe
Q psy14130 289 QVGLWDENDLNTPLALETVD---SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFM 365 (494)
Q Consensus 289 ~i~iwd~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~ 365 (494)
.|++||+++........... ....+........+..+ ++++.|+.|++||+.+++.+..+. . +..+|.+++|+
T Consensus 268 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~d~~~~~~~~~~~-~--~~~~v~~~~~s 343 (408)
T 4a11_B 268 RMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEF-VFVPYGSTIAVYTVYSGEQITMLK-G--HYKTVDCCVFQ 343 (408)
T ss_dssp CEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCE-EEEEETTEEEEEETTTCCEEEEEC-C--CSSCEEEEEEE
T ss_pred eEEEEECCCCccceeccccccccccccceeEEecCCCceE-EEEecCCEEEEEECcCCcceeeec-c--CCCeEEEEEEc
Confidence 99999998765433222111 11122222222334444 566789999999999998755443 2 35789999999
Q ss_pred cCCceeeec--cceeEEEEeeC
Q psy14130 366 PKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 366 p~~~~~~~~--~~~~~~~~l~~ 385 (494)
|++.+++++ |+.+++|++..
T Consensus 344 ~~~~~l~s~~~dg~i~iw~~~~ 365 (408)
T 4a11_B 344 SNFQELYSGSRDCNILAWVPSL 365 (408)
T ss_dssp TTTTEEEEEETTSCEEEEEECC
T ss_pred CCCCEEEEECCCCeEEEEeCCC
Confidence 999888875 89999999987
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-30 Score=287.93 Aligned_cols=220 Identities=20% Similarity=0.337 Sum_probs=186.9
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEE
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSF 227 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~ 227 (494)
.+.|++|++.++ .....+.+|...|.+++|+|++ .+|++++.|+.|++||+.+++.. .+..|...|.+++|
T Consensus 982 ~g~i~i~d~~~~-------~~~~~~~~h~~~v~~l~~s~dg-~~l~s~~~dg~i~vwd~~~~~~~-~~~~~~~~v~~~~~ 1052 (1249)
T 3sfz_A 982 DGAIKIIELPNN-------RVFSSGVGHKKAVRHIQFTADG-KTLISSSEDSVIQVWNWQTGDYV-FLQAHQETVKDFRL 1052 (1249)
T ss_dssp TSCCEEEETTTT-------SCEEECCCCSSCCCCEEECSSS-SCEEEECSSSBEEEEETTTTEEE-CCBCCSSCEEEEEE
T ss_pred CCCEEEEEcCCC-------ceeeecccCCCceEEEEECCCC-CEEEEEcCCCEEEEEECCCCceE-EEecCCCcEEEEEE
Confidence 457999999988 6667888999999999999998 79999999999999999998766 45679999999999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee
Q psy14130 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV 307 (494)
Q Consensus 228 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~ 307 (494)
+|++ .+++++.|+.|++||+.+++.+..+.+|.+. +..++|+|++. ++++| +.|+.|++||+.+......+.
T Consensus 1053 ~~~~-~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~-v~~~~~s~d~~-~l~s~---s~d~~v~iwd~~~~~~~~~l~-- 1124 (1249)
T 3sfz_A 1053 LQDS-RLLSWSFDGTVKVWNVITGRIERDFTCHQGT-VLSCAISSDAT-KFSST---SADKTAKIWSFDLLSPLHELK-- 1124 (1249)
T ss_dssp CSSS-EEEEEESSSEEEEEETTTTCCCEEEECCSSC-CCCEEECSSSS-SCEEE---CCSSCCCEECSSSSSCSBCCC--
T ss_pred cCCC-cEEEEECCCcEEEEECCCCceeEEEcccCCc-EEEEEECCCCC-EEEEE---cCCCcEEEEECCCcceeeeec--
Confidence 9966 6789999999999999999999999999988 99999999955 45555 589999999998765433332
Q ss_pred cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEec------ccccCCCCeeEEEEecCCceeeeccceeEEE
Q psy14130 308 DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFL------NQSLSGAPQRGLGFMPKRGCDVTQCEIFRFF 381 (494)
Q Consensus 308 ~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~------~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~ 381 (494)
.|...|.+++|+|++++| ++|+.||.|++||+.+++...... ....+...|.+++|+|++.+++++++.+++|
T Consensus 1125 ~h~~~v~~~~~s~dg~~l-at~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~g~v~vw 1203 (1249)
T 3sfz_A 1125 GHNGCVRCSAFSLDGILL-ATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAGGYLKWW 1203 (1249)
T ss_dssp CCSSCEEEEEECSSSSEE-EEEETTSCCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEESSSEEEB
T ss_pred cCCCcEEEEEECCCCCEE-EEEeCCCEEEEEECCCCceEEEeccccccccccccCceEEEEEECCCCCEEEECCCeEEEE
Confidence 466789999999999998 999999999999999987643321 0123567899999999999999999999999
Q ss_pred EeeC
Q psy14130 382 KLHT 385 (494)
Q Consensus 382 ~l~~ 385 (494)
++.+
T Consensus 1204 d~~~ 1207 (1249)
T 3sfz_A 1204 NVAT 1207 (1249)
T ss_dssp CSSS
T ss_pred ECCC
Confidence 9887
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=99.97 E-value=8.3e-29 Score=241.76 Aligned_cols=224 Identities=17% Similarity=0.271 Sum_probs=177.8
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccc------------------cccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGH------------------KRRVGYIEWHPTAENVVASAGFDYLIILWDVGKG 209 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h------------------~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~ 209 (494)
.+.++||++.++. .+..+.+| ...|.+++|+|++ ++|++|+.|++|++||+.++
T Consensus 84 ~~~v~i~~~~~g~-------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg-~~l~s~~~d~~i~iwd~~~~ 155 (393)
T 1erj_A 84 NKTTQVYRVSDGS-------LVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDG-KFLATGAEDRLIRIWDIENR 155 (393)
T ss_dssp BSCEEEEETTTCC-------EEEEECC-----------------CCCCBEEEEEECTTS-SEEEEEETTSCEEEEETTTT
T ss_pred CCcEEEEEecCCC-------EEEEecCccccccccccccccccCCCceeEEEEEECCCC-CEEEEEcCCCeEEEEECCCC
Confidence 4579999998883 33334333 2359999999998 79999999999999999999
Q ss_pred eEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCce
Q psy14130 210 EALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQ 289 (494)
Q Consensus 210 ~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~ 289 (494)
+.+..+.+|...|++++|+|++++|++++.|++|++||++++++...+..+. . +..++++|.++.++++| +.|+.
T Consensus 156 ~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~-~-v~~~~~~~~~~~~l~~~---s~d~~ 230 (393)
T 1erj_A 156 KIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIED-G-VTTVAVSPGDGKYIAAG---SLDRA 230 (393)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSS-C-EEEEEECSTTCCEEEEE---ETTSC
T ss_pred cEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCC-C-cEEEEEECCCCCEEEEE---cCCCc
Confidence 9999999999999999999999999999999999999999999887776443 3 78899999557777777 69999
Q ss_pred EEEEeCCCCCCceeEe-----eecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEE---------ecccccC
Q psy14130 290 VGLWDENDLNTPLALE-----TVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIH---------FLNQSLS 355 (494)
Q Consensus 290 i~iwd~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~---------~~~~~~~ 355 (494)
|++||+++......+. ...|...|.+++|+|++++| ++|+.|+.|++||+++...... ......+
T Consensus 231 v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l-~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h 309 (393)
T 1erj_A 231 VRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSV-VSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGH 309 (393)
T ss_dssp EEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEE-EEEETTSEEEEEEC---------------CEEEEEECC
T ss_pred EEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEE-EEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecc
Confidence 9999998754322221 12466789999999999998 8999999999999986432110 0111234
Q ss_pred CCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 356 GAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 356 ~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
...|.+++|+|++.+++++ |+.+++|++..
T Consensus 310 ~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~ 341 (393)
T 1erj_A 310 KDFVLSVATTQNDEYILSGSKDRGVLFWDKKS 341 (393)
T ss_dssp SSCEEEEEECGGGCEEEEEETTSEEEEEETTT
T ss_pred cCcEEEEEECCCCCEEEEEeCCCeEEEEECCC
Confidence 5779999999999988875 89999999877
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-29 Score=250.25 Aligned_cols=214 Identities=16% Similarity=0.252 Sum_probs=177.8
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcC--CCCCEEEEEeCCCeEEEEECCCCeE---------------
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHP--TAENVVASAGFDYLIILWDVGKGEA--------------- 211 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p--~~~~~l~s~s~d~~v~iwd~~~~~~--------------- 211 (494)
++|++||+.++ +.+..+.+|...|.+++|++ ++ .+|++|+.|++|++||+.++..
T Consensus 183 g~i~vwd~~~~-------~~~~~~~~h~~~v~~l~~~~~~~~-~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~ 254 (464)
T 3v7d_B 183 RTVRVWDIKKG-------CCTHVFEGHNSTVRCLDIVEYKNI-KYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFH 254 (464)
T ss_dssp SCEEEEETTTT-------EEEEEECCCSSCEEEEEEEESSSC-EEEEEEETTSCEEEEECCCCCCC------CCSSEEES
T ss_pred CCEEEEECCCC-------cEEEEECCCCCccEEEEEecCCCC-CEEEEEcCCCcEEEeeCCCCcccccccccCCcceEee
Confidence 37999999988 77788999999999999984 55 7999999999999999987652
Q ss_pred --------EEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEec
Q psy14130 212 --------LTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFS 283 (494)
Q Consensus 212 --------~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 283 (494)
+..+.+|...|.++ +++++++++++.|+.|++||+++++.+..+.+|... +..+.|++++..++ +|
T Consensus 255 ~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~-sg-- 328 (464)
T 3v7d_B 255 TPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDR-IYSTIYDHERKRCI-SA-- 328 (464)
T ss_dssp CGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSC-EEEEEEETTTTEEE-EE--
T ss_pred ccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCC-EEEEEEcCCCCEEE-EE--
Confidence 55677899999887 567899999999999999999999999999999887 99999999855554 55
Q ss_pred CCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEE
Q psy14130 284 RHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLG 363 (494)
Q Consensus 284 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~ 363 (494)
+.|+.|++||+++......+ ..|...+.++.|+ +++| ++|+.||.|++||+.+++..... .+...+..++
T Consensus 329 -~~dg~i~vwd~~~~~~~~~~--~~h~~~v~~~~~~--~~~l-~s~s~dg~v~vwd~~~~~~~~~~----~~~~~~~~~~ 398 (464)
T 3v7d_B 329 -SMDTTIRIWDLENGELMYTL--QGHTALVGLLRLS--DKFL-VSAAADGSIRGWDANDYSRKFSY----HHTNLSAITT 398 (464)
T ss_dssp -ETTSCEEEEETTTTEEEEEE--CCCSSCEEEEEEC--SSEE-EEEETTSEEEEEETTTCCEEEEE----ECTTCCCEEE
T ss_pred -eCCCcEEEEECCCCcEEEEE--eCCCCcEEEEEEc--CCEE-EEEeCCCcEEEEECCCCceeeee----cCCCCccEEE
Confidence 48999999999875433222 2466789999987 4666 89999999999999987754332 2356788899
Q ss_pred EecCCceeeec-cceeEEEEeeCC
Q psy14130 364 FMPKRGCDVTQ-CEIFRFFKLHTT 386 (494)
Q Consensus 364 ~~p~~~~~~~~-~~~~~~~~l~~~ 386 (494)
|+|++.+++++ ++.+++|++.++
T Consensus 399 ~~~~~~~l~~~~dg~i~iwd~~~g 422 (464)
T 3v7d_B 399 FYVSDNILVSGSENQFNIYNLRSG 422 (464)
T ss_dssp EEECSSEEEEEETTEEEEEETTTC
T ss_pred EEeCCCEEEEecCCeEEEEECCCC
Confidence 99999988875 899999999873
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.3e-29 Score=248.15 Aligned_cols=218 Identities=18% Similarity=0.308 Sum_probs=170.9
Q ss_pred CcEEEEEcCCCCCCCCccc----------------ceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNE----------------WIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEAL 212 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~----------------~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~ 212 (494)
+.|++||+.+......... ....+.+|...|.++. +++ .++++|+.|+.|++||+.+++.+
T Consensus 227 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~-~~l~~~~~d~~i~vwd~~~~~~~ 303 (464)
T 3v7d_B 227 NTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVS--GHG-NIVVSGSYDNTLIVWDVAQMKCL 303 (464)
T ss_dssp SCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEE--EET-TEEEEEETTSCEEEEETTTTEEE
T ss_pred CcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEc--CCC-CEEEEEeCCCeEEEEECCCCcEE
Confidence 4799999987753321111 2557788999999884 555 69999999999999999999999
Q ss_pred EEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEE
Q psy14130 213 TVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGL 292 (494)
Q Consensus 213 ~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~i 292 (494)
..+.+|...|.+++|+|++++|++|+.|+.|++||+++++++..+.+|... +..+.+++ .++++| +.|+.|++
T Consensus 304 ~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~-v~~~~~~~---~~l~s~---s~dg~v~v 376 (464)
T 3v7d_B 304 YILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTAL-VGLLRLSD---KFLVSA---AADGSIRG 376 (464)
T ss_dssp EEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSC-EEEEEECS---SEEEEE---ETTSEEEE
T ss_pred EEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCc-EEEEEEcC---CEEEEE---eCCCcEEE
Confidence 999999999999999999999999999999999999999999999999887 88888863 355555 48999999
Q ss_pred EeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceee
Q psy14130 293 WDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDV 372 (494)
Q Consensus 293 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~ 372 (494)
||+++..... ...+...+..++|+++++++ ++|+ ||.|++||+++++.+..... .+..+|.+++|+++..+.+
T Consensus 377 wd~~~~~~~~---~~~~~~~~~~~~~~~~~~~l-~~~~-dg~i~iwd~~~g~~~~~~~~--~~~~~v~~v~~~~~~l~~~ 449 (464)
T 3v7d_B 377 WDANDYSRKF---SYHHTNLSAITTFYVSDNIL-VSGS-ENQFNIYNLRSGKLVHANIL--KDADQIWSVNFKGKTLVAA 449 (464)
T ss_dssp EETTTCCEEE---EEECTTCCCEEEEEECSSEE-EEEE-TTEEEEEETTTCCEEESCTT--TTCSEEEEEEEETTEEEEE
T ss_pred EECCCCceee---eecCCCCccEEEEEeCCCEE-EEec-CCeEEEEECCCCcEEehhhc--cCCCcEEEEEecCCEEEEE
Confidence 9998755322 23355667778999999988 7776 99999999999987544333 3467899999985543333
Q ss_pred ec-cceeEEEEe
Q psy14130 373 TQ-CEIFRFFKL 383 (494)
Q Consensus 373 ~~-~~~~~~~~l 383 (494)
.+ ++...+|.+
T Consensus 450 ~~~~g~~~i~~l 461 (464)
T 3v7d_B 450 VEKDGQSFLEIL 461 (464)
T ss_dssp EEETTEEEEEEE
T ss_pred EEeCCeEEEEEe
Confidence 33 555544443
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-29 Score=246.09 Aligned_cols=188 Identities=18% Similarity=0.284 Sum_probs=153.4
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.|++||+.... .....+.+|...|.+++|+|++ .+|++|+.|+.|++||+.+++.+..+..|...|.+++|+
T Consensus 196 g~i~i~d~~~~~------~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~ 268 (401)
T 4aez_A 196 GAIHHHDVRIAN------HQIGTLQGHSSEVCGLAWRSDG-LQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWC 268 (401)
T ss_dssp SEEEEEETTSSS------CEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEEC
T ss_pred CCEEEEecccCc------ceeeEEcCCCCCeeEEEEcCCC-CEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEEC
Confidence 369999998542 5567888999999999999998 799999999999999999999999999999999999999
Q ss_pred CCCC-EEEEEe--CCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEE-EecCCCCceEEEEeCCCCCCceeE
Q psy14130 229 RDGS-RLVTTC--KDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTT-GFSRHSDRQVGLWDENDLNTPLAL 304 (494)
Q Consensus 229 ~~~~-~l~s~~--~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~d~~i~iwd~~~~~~~~~~ 304 (494)
|++. ++++++ .|+.|++||+++++.+..+..+ .. +..+.|++++..++++ | ..|+.|++||+++.......
T Consensus 269 p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~-~~-v~~~~~s~~~~~l~~~~g---~~dg~i~v~~~~~~~~~~~~ 343 (401)
T 4aez_A 269 PWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAG-SQ-VTSLIWSPHSKEIMSTHG---FPDNNLSIWSYSSSGLTKQV 343 (401)
T ss_dssp TTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECS-SC-EEEEEECSSSSEEEEEEC---TTTCEEEEEEEETTEEEEEE
T ss_pred CCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCC-Cc-EEEEEECCCCCeEEEEee---cCCCcEEEEecCCccceeEE
Confidence 9764 666655 7999999999999988888643 44 8999999996666665 4 57999999999875433333
Q ss_pred eeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEe
Q psy14130 305 ETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHF 349 (494)
Q Consensus 305 ~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~ 349 (494)
....+...|.+++|+|++++| ++++.||.|++||+.+++.+...
T Consensus 344 ~~~~h~~~v~~~~~s~dg~~l-~s~~~dg~i~iw~~~~~~~~~~~ 387 (401)
T 4aez_A 344 DIPAHDTRVLYSALSPDGRIL-STAASDENLKFWRVYDGDHVKRP 387 (401)
T ss_dssp EEECCSSCCCEEEECTTSSEE-EEECTTSEEEEEECCC-------
T ss_pred EecCCCCCEEEEEECCCCCEE-EEEeCCCcEEEEECCCCcccccc
Confidence 334567889999999999999 89999999999999998765443
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.4e-29 Score=267.50 Aligned_cols=207 Identities=13% Similarity=0.130 Sum_probs=162.8
Q ss_pred cccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEE----EE--ec-----CCCCceEEEEEcCCCCEEEEEeCC
Q psy14130 172 LHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEAL----TV--ID-----CHPDVINCLSFNRDGSRLVTTCKD 240 (494)
Q Consensus 172 ~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~----~~--~~-----~h~~~v~~l~~~~~~~~l~s~~~d 240 (494)
+.||...+.+++|+|++ ++|+||+.|++|++||+.++... .. +. +|...|++++|+|||++||+|+.|
T Consensus 431 l~G~~~~v~sv~~spdg-~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~D 509 (902)
T 2oaj_A 431 LKGGVRTKRQKLPAEYG-TAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIET 509 (902)
T ss_dssp CCCSBCCCCCCCCCSEE-EEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETT
T ss_pred ccCCcCCCCcccccccC-cEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecC
Confidence 45666667777788988 79999999999999999877421 11 22 799999999999999999999999
Q ss_pred CeEEEEeCCCCc---------------------------------------------eEEEeeecCCCCceEEEEECCCC
Q psy14130 241 KTVRVLDPRTGL---------------------------------------------VISQGVCHPGTRSSKAVFIGDTG 275 (494)
Q Consensus 241 ~~v~iwd~~~~~---------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~ 275 (494)
|+|+|||+.+++ ++..+.+|.+. +..++|+|++
T Consensus 510 gtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~-V~svafSpdG- 587 (902)
T 2oaj_A 510 GDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGK-TSAINNSNIG- 587 (902)
T ss_dssp SCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCS-EEEEEECBTS-
T ss_pred cEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCc-EEEEEecCCc-
Confidence 999999998662 36777889888 9999999995
Q ss_pred eEEEEEecCCCCceEEEEeCCCCCCcee--Eeee--cCCCceEEeEEe-----CCC---CEEEEEEeCCCcEEEEEe---
Q psy14130 276 RIVTTGFSRHSDRQVGLWDENDLNTPLA--LETV--DSSSGVLFPYYD-----HDT---RILFLAGKGDGNIRYYEL--- 340 (494)
Q Consensus 276 ~l~~~g~~~~~d~~i~iwd~~~~~~~~~--~~~~--~~~~~v~~~~~~-----~~~---~~l~~~g~~dg~i~~wd~--- 340 (494)
+|++| +.|++|+|||+++...... ...+ .|...|.+++|+ ||| ++| ++|+.|++|++||+
T Consensus 588 -~lAsg---s~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l-~sgs~D~tv~~wd~~p~ 662 (902)
T 2oaj_A 588 -FVGIA---YAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILM-VCGTDMGEVITYKILPA 662 (902)
T ss_dssp -EEEEE---ETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEE-EEEETTSEEEEEEEEEC
T ss_pred -EEEEE---eCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEE-EEEecCCcEEEEEEecC
Confidence 77777 6999999999876432111 1112 466789999999 886 566 99999999999999
Q ss_pred eCCCceEEecccc--cCCCCeeEEE-Ee----------------------cCCceeeeccceeEEEEeeCC
Q psy14130 341 TNERPYIHFLNQS--LSGAPQRGLG-FM----------------------PKRGCDVTQCEIFRFFKLHTT 386 (494)
Q Consensus 341 ~~~~~~~~~~~~~--~~~~~v~~~~-~~----------------------p~~~~~~~~~~~~~~~~l~~~ 386 (494)
.+|+....+.... .+..+|.+++ |+ +++.+++++++.+|+|++.+.
T Consensus 663 ~~g~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l~~~~~~ir~~~~~~~ 733 (902)
T 2oaj_A 663 SGGKFDVQLMDITNVTSKGPIHKIDAFSKETKSSCLATIPKMQNLSKGLCIPGIVLITGFDDIRLITLGKS 733 (902)
T ss_dssp GGGCEEEEEEEEEECCSSCCCCEEEEEETTTCCBCBCBHHHHHGGGGTCCCCEEEEEECSSEEEEECTTCC
T ss_pred CCCcEEEEecCceecCCCCceEEEEeEecCCCCcccCCHHHHhccCCCCCCCeEEEEEeccceEEEeCccc
Confidence 7777654443332 2356788777 66 677788999999999999773
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-29 Score=249.99 Aligned_cols=269 Identities=18% Similarity=0.280 Sum_probs=197.5
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 82 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~ 82 (494)
.+|.+.|++++|+|+++++|++|+.||.|+ +|+......... ... .
T Consensus 125 ~~h~~~v~~l~~~p~~~~~lat~~~dg~V~-vwd~~~~~~~~~--------~~~--------~----------------- 170 (430)
T 2xyi_A 125 INHEGEVNRARYMPQNACVIATKTPSSDVL-VFDYTKHPSKPE--------PSG--------E----------------- 170 (430)
T ss_dssp EEESSCCSEEEEETTEEEEEEEECSSSCEE-EEEGGGSCSSCC--------TTC--------C-----------------
T ss_pred EcCCCcEEEEEECCCCCcEEEEECCCCcEE-EEECCCcccccC--------ccc--------c-----------------
Confidence 479999999999994488999999999999 887643211000 000 0
Q ss_pred eccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceE-EEEEeecCCcEEEEEEcCcEEEEEcCCCCC
Q psy14130 83 PIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFV-AVVTEVAGGGAFLVLPIHRVKLWYIPDGGL 161 (494)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~ 161 (494)
.. ....+......+..+.++|... .++. ++.+ +.|++|++.++..
T Consensus 171 ------------~~-------------~~~~~~~h~~~v~~l~~~~~~~~~l~s-~~~d--------g~i~vwd~~~~~~ 216 (430)
T 2xyi_A 171 ------------CQ-------------PDLRLRGHQKEGYGLSWNPNLNGYLLS-ASDD--------HTICLWDINATPK 216 (430)
T ss_dssp ------------CC-------------CSEEEECCSSCCCCEEECTTSTTEEEE-ECTT--------SCEEEEETTSCCB
T ss_pred ------------CC-------------CcEEecCCCCCeEEEEeCCCCCCeEEE-EeCC--------CeEEEEeCCCCCC
Confidence 00 0000011112334444544321 1111 1222 4799999988543
Q ss_pred CCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC---eEEEEecCCCCceEEEEEcCCCC-EEEEE
Q psy14130 162 SGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKG---EALTVIDCHPDVINCLSFNRDGS-RLVTT 237 (494)
Q Consensus 162 ~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~---~~~~~~~~h~~~v~~l~~~~~~~-~l~s~ 237 (494)
......+...+.+|...|.+++|+|++..+|++++.|+.|++||++++ +.+..+..|...|++++|+|++. +|++|
T Consensus 217 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg 296 (430)
T 2xyi_A 217 EHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATG 296 (430)
T ss_dssp GGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEE
T ss_pred CCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEE
Confidence 222223456777899999999999965689999999999999999987 57778889999999999999887 78999
Q ss_pred eCCCeEEEEeCCC-CceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCC------------ceeE
Q psy14130 238 CKDKTVRVLDPRT-GLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNT------------PLAL 304 (494)
Q Consensus 238 ~~d~~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~------------~~~~ 304 (494)
+.||.|++||+++ +..+..+..|... +.++.|+|++..++++| +.|+.|++||++.... ....
T Consensus 297 ~~dg~v~vwd~~~~~~~~~~~~~h~~~-v~~i~~sp~~~~~l~s~---~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 372 (430)
T 2xyi_A 297 SADKTVALWDLRNLKLKLHSFESHKDE-IFQVQWSPHNETILASS---GTDRRLHVWDLSKIGEEQSTEDAEDGPPELLF 372 (430)
T ss_dssp ETTSEEEEEETTCTTSCSEEEECCSSC-EEEEEECSSCTTEEEEE---ETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEE
T ss_pred eCCCeEEEEeCCCCCCCeEEeecCCCC-EEEEEECCCCCCEEEEE---eCCCcEEEEeCCCCccccCccccccCCcceEE
Confidence 9999999999998 4578888889887 99999999977777777 6899999999986332 2222
Q ss_pred eeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCC
Q psy14130 305 ETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNE 343 (494)
Q Consensus 305 ~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~ 343 (494)
....|...|..++|+|++++++++++.||.|++|++...
T Consensus 373 ~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 373 IHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp ECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred EcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 233456779999999999955599999999999999764
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=99.97 E-value=5.1e-29 Score=233.59 Aligned_cols=210 Identities=12% Similarity=0.152 Sum_probs=169.8
Q ss_pred EecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCC--CeEEEEecCCCCceEEEEEcCC--CCEEEEEeCCCeEEE
Q psy14130 170 MDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGK--GEALTVIDCHPDVINCLSFNRD--GSRLVTTCKDKTVRV 245 (494)
Q Consensus 170 ~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~--~~~~~~~~~h~~~v~~l~~~~~--~~~l~s~~~d~~v~i 245 (494)
..+.+|...|.+++|+|+| ++||+|+.|++|++||+.. .+.+.++.+|.+.|++++|+++ +++|++|+.|++|++
T Consensus 3 ~~~~~h~~~V~~~~~s~~g-~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~i 81 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYG-KRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMI 81 (297)
T ss_dssp EECCSCSSCEEEEEECTTS-SEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEE
T ss_pred eeccCCcCceEEEEECCCC-CEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEE
Confidence 4577899999999999998 7999999999999999974 3677889999999999999863 899999999999999
Q ss_pred EeCCCCc--eEEEeeecCCCCceEEEEECCC-CeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCC
Q psy14130 246 LDPRTGL--VISQGVCHPGTRSSKAVFIGDT-GRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDT 322 (494)
Q Consensus 246 wd~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 322 (494)
||+++++ .+..+..|... +..++|+|+. +.++++| +.|+.|++||+++...........|...+.+++|+|++
T Consensus 82 Wd~~~~~~~~~~~~~~h~~~-v~~v~~~p~~~g~~l~s~---s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 157 (297)
T 2pm7_B 82 WKEENGRWSQIAVHAVHSAS-VNSVQWAPHEYGPMLLVA---SSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPAT 157 (297)
T ss_dssp EEBSSSCBCCCEEECCCSSC-EEEEEECCGGGCSEEEEE---ETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC
T ss_pred EEcCCCceEEEEEeecCCCc-eeEEEeCcCCCCcEEEEE---ECCCcEEEEEecCCCceeeeeeecccCccceEeecCCc
Confidence 9999874 56667788877 9999999972 4566666 59999999999865332222333567889999999973
Q ss_pred -------------CEEEEEEeCCCcEEEEEeeCCCceEEecccc-cCCCCeeEEEEecCC---ceeeec--cceeEEEEe
Q psy14130 323 -------------RILFLAGKGDGNIRYYELTNERPYIHFLNQS-LSGAPQRGLGFMPKR---GCDVTQ--CEIFRFFKL 383 (494)
Q Consensus 323 -------------~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~-~~~~~v~~~~~~p~~---~~~~~~--~~~~~~~~l 383 (494)
+.| ++|+.|+.|++||+++++........+ .+...|.+++|+|++ .+++++ |+.+++|++
T Consensus 158 ~~~~~~~~~~~~~~~l-~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~ 236 (297)
T 2pm7_B 158 IEEDGEHNGTKESRKF-VTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQ 236 (297)
T ss_dssp ------------CCEE-EEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEE
T ss_pred ccccccCCCCCCcceE-EEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEe
Confidence 456 999999999999999876322222111 246789999999984 667664 999999998
Q ss_pred eC
Q psy14130 384 HT 385 (494)
Q Consensus 384 ~~ 385 (494)
..
T Consensus 237 ~~ 238 (297)
T 2pm7_B 237 DN 238 (297)
T ss_dssp SS
T ss_pred CC
Confidence 76
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.4e-28 Score=227.96 Aligned_cols=219 Identities=18% Similarity=0.295 Sum_probs=179.1
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC-eEEEEecCCCCceEEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKG-EALTVIDCHPDVINCLSF 227 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~-~~~~~~~~h~~~v~~l~~ 227 (494)
+.|+||++.++ +.+..+.+|...+.++.+.+ .++++++.++.+++|+.... ..+..+.+|...+..+.|
T Consensus 89 g~v~iw~~~~~-------~~~~~~~~h~~~~~~~~~~~---~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (318)
T 4ggc_A 89 AEVQLWDVQQQ-------KRLRNMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRW 158 (318)
T ss_dssp SEEEEEETTTT-------EEEEEEECCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEE
T ss_pred CcEEEeecCCc-------eeEEEecCccceEEEeecCC---CEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEE
Confidence 37999999998 77888999999998877654 58999999999999998875 466778899999999999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCce----EEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCcee
Q psy14130 228 NRDGSRLVTTCKDKTVRVLDPRTGLV----ISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLA 303 (494)
Q Consensus 228 ~~~~~~l~s~~~d~~v~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~ 303 (494)
++++++|++++.|+.|++||+++++. ......+.+. +..+.+.+.+..++..+ +.+.++.|++||.+....
T Consensus 159 ~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~-~~~~~~~i~lwd~~~~~~--- 233 (318)
T 4ggc_A 159 APDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGA-VKAVAWCPWQSNVLATG-GGTSDRHIRIWNVCSGAC--- 233 (318)
T ss_dssp CTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSC-EEEEEECTTSTTEEEEE-ECTTTCEEEEEETTTCCE---
T ss_pred cCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCc-eEEEEecCCCCcEEEEE-ecCCCCEEEEEecccccc---
Confidence 99999999999999999999998762 3444555555 88899999877766443 126789999999887543
Q ss_pred EeeecCCCceEEeEEeCCCCEEEEE-EeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEE
Q psy14130 304 LETVDSSSGVLFPYYDHDTRILFLA-GKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRF 380 (494)
Q Consensus 304 ~~~~~~~~~v~~~~~~~~~~~l~~~-g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~ 380 (494)
.....+...+..+.|+|+++.++++ |+.|+.|++||+++++++..+. . |..+|++++|+|++.+++++ |+.+|+
T Consensus 234 ~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~-g--H~~~V~~l~~spdg~~l~S~s~D~~v~i 310 (318)
T 4ggc_A 234 LSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELK-G--HTSRVLSLTMSPDGATVASAAADETLRL 310 (318)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEEC-C--CSSCEEEEEECTTSSCEEEEETTTEEEE
T ss_pred cccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEc-C--CCCCEEEEEEcCCCCEEEEEecCCeEEE
Confidence 2333466789999999999988543 4479999999999998865543 2 46789999999999998875 999999
Q ss_pred EEeeC
Q psy14130 381 FKLHT 385 (494)
Q Consensus 381 ~~l~~ 385 (494)
|++.+
T Consensus 311 Wd~~~ 315 (318)
T 4ggc_A 311 WRCFE 315 (318)
T ss_dssp ECCSC
T ss_pred EECCC
Confidence 99876
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.6e-29 Score=246.26 Aligned_cols=179 Identities=15% Similarity=0.189 Sum_probs=154.0
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEE
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSF 227 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~ 227 (494)
.+.|++||+.++ ..+..+.+|...|.+++|+|++ .+|++++.|+.|++||+.+++.+..+.+|...|.+++|
T Consensus 226 ~g~i~~~d~~~~-------~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~ 297 (425)
T 1r5m_A 226 KGAIFVYQITEK-------TPTGKLIGHHGPISVLEFNDTN-KLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASW 297 (425)
T ss_dssp GGCEEEEETTCS-------SCSEEECCCSSCEEEEEEETTT-TEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEE
T ss_pred CCeEEEEEcCCC-------ceeeeeccCCCceEEEEECCCC-CEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEE
Confidence 347999999987 5667788899999999999998 69999999999999999999999999999999999999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCc------
Q psy14130 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTP------ 301 (494)
Q Consensus 228 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~------ 301 (494)
+|++ ++++++.|+.|++||+++++.+..+..|... +..+.|+|++ .++++| +.|+.|++||+++...+
T Consensus 298 ~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-i~~~~~s~~~-~~l~~~---~~dg~i~i~~~~~~~~~~~~~~~ 371 (425)
T 1r5m_A 298 VGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVP-IFAGRISQDG-QKYAVA---FMDGQVNVYDLKKLNSKSRSLYG 371 (425)
T ss_dssp ETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCC-EEEEEECTTS-SEEEEE---ETTSCEEEEECHHHHC-------
T ss_pred CCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCcc-EEEEEEcCCC-CEEEEE---ECCCeEEEEECCCCccceeeeec
Confidence 9999 9999999999999999999999999988887 9999999985 455555 48999999999764410
Q ss_pred -----------eeEeee-cCCC--ceEEeEEeCCCCEEEEEEeCCCcEEEEEee
Q psy14130 302 -----------LALETV-DSSS--GVLFPYYDHDTRILFLAGKGDGNIRYYELT 341 (494)
Q Consensus 302 -----------~~~~~~-~~~~--~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~ 341 (494)
.....+ .+.. .|.+++|+|++++| ++++.||.|++||++
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 372 NRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKI-SVAYSLQEGSVVAIP 424 (425)
T ss_dssp -------CEECCEEEEECCTTCCCCEEEEEECTTSSEE-EEEESSSCCEEEECC
T ss_pred ccccccCcccchhhhhhcCcccCCceEEEEccCCCceE-EEEecCceEEEEeec
Confidence 012222 2333 89999999999988 889999999999985
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-28 Score=243.94 Aligned_cols=208 Identities=20% Similarity=0.298 Sum_probs=168.0
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEE---EEecCCCCceEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEAL---TVIDCHPDVINCL 225 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~---~~~~~h~~~v~~l 225 (494)
+.|++||+.++ +.+..+.+|...|.+++|++ ..+++|+.|+.|++||+.+++.. ..+.+|...|.++
T Consensus 193 g~i~vwd~~~~-------~~~~~~~~h~~~v~~l~~~~---~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~ 262 (435)
T 1p22_A 193 STVRVWDVNTG-------EMLNTLIHHCEAVLHLRFNN---GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVV 262 (435)
T ss_dssp SCEEEEESSSC-------CEEEEECCCCSCEEEEECCT---TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEE
T ss_pred CeEEEEECCCC-------cEEEEEcCCCCcEEEEEEcC---CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEE
Confidence 37999999988 67788889999999999974 48999999999999999887654 6778999999999
Q ss_pred EEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEe
Q psy14130 226 SFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALE 305 (494)
Q Consensus 226 ~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~ 305 (494)
+| ++++|++|+.|+.|++||+++++.+..+.+|... +..+.+. +.++++| +.|+.|++||+++......+
T Consensus 263 ~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~-v~~~~~~---~~~l~~g---~~dg~i~iwd~~~~~~~~~~- 332 (435)
T 1p22_A 263 DF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRG-IACLQYR---DRLVVSG---SSDNTIRLWDIECGACLRVL- 332 (435)
T ss_dssp EE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSC-EEEEEEE---TTEEEEE---ETTSCEEEEETTTCCEEEEE-
T ss_pred Ee--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCc-EEEEEeC---CCEEEEE---eCCCeEEEEECCCCCEEEEE-
Confidence 99 6889999999999999999999999999999887 8888884 3455666 58999999999986543322
Q ss_pred eecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCC---------ceEEecccccCCCCeeEEEEecCCceeee--c
Q psy14130 306 TVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNER---------PYIHFLNQSLSGAPQRGLGFMPKRGCDVT--Q 374 (494)
Q Consensus 306 ~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~---------~~~~~~~~~~~~~~v~~~~~~p~~~~~~~--~ 374 (494)
..+...+.+++| ++++| ++|+.||.|++||+.+++ .+.. +. .+..+|.+++| ++..+++ .
T Consensus 333 -~~h~~~v~~~~~--~~~~l-~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~-~~--~h~~~v~~l~~--~~~~l~s~s~ 403 (435)
T 1p22_A 333 -EGHEELVRCIRF--DNKRI-VSGAYDGKIKVWDLVAALDPRAPAGTLCLRT-LV--EHSGRVFRLQF--DEFQIVSSSH 403 (435)
T ss_dssp -CCCSSCEEEEEC--CSSEE-EEEETTSCEEEEEHHHHTSTTSCTTTTEEEE-EC--CCSSCCCCEEE--CSSCEEECCS
T ss_pred -eCCcCcEEEEEe--cCCEE-EEEeCCCcEEEEECCCCCCccccccchheee-cc--CCCCCeEEEEe--CCCEEEEEeC
Confidence 236678888888 67777 999999999999998765 3222 22 24578999999 4444555 4
Q ss_pred cceeEEEEeeC
Q psy14130 375 CEIFRFFKLHT 385 (494)
Q Consensus 375 ~~~~~~~~l~~ 385 (494)
|+.+++|++..
T Consensus 404 Dg~i~iwd~~~ 414 (435)
T 1p22_A 404 DDTILIWDFLN 414 (435)
T ss_dssp SSEEEEEC---
T ss_pred CCEEEEEECCC
Confidence 89999999987
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-28 Score=240.51 Aligned_cols=227 Identities=13% Similarity=0.113 Sum_probs=164.6
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcC--------CCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCC
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHP--------TAENVVASAGFDYLIILWDVGKGEALTVIDCHPD 220 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p--------~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~ 220 (494)
++|+|||+.++.... ...+..+.||.+.|++++|+| ++ ++|||||.|++|+|||+.++.++..+.+|..
T Consensus 111 ~~v~lw~~~~~~~~~--~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~-~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~ 187 (393)
T 4gq1_A 111 NTVRLIITKNETIIT--QHVLGGKSGHHNFVNDIDIADVYSADNRLAE-QVIASVGDDCTLIIWRLTDEGPILAGYPLSS 187 (393)
T ss_dssp SCEEEEEEETTEEEE--EEEECTTTSCSSCEEEEEEEEEECTTCSEEE-EEEEEEETTSEEEEEEEETTEEEEEEEECSS
T ss_pred CcEEEEECCCCccce--eeeecccCCCCCceEEEEEccccccccCCCC-CEEEEEECCCeEEEEECCCCceeeeecCCCC
Confidence 379999998773211 023446789999999999998 55 7999999999999999999888888888999
Q ss_pred ceEEEEEcCCCC-EEEEEeCCCeEEEEeCCCCceEEEe-------------------------eecCCCCceEEEEECCC
Q psy14130 221 VINCLSFNRDGS-RLVTTCKDKTVRVLDPRTGLVISQG-------------------------VCHPGTRSSKAVFIGDT 274 (494)
Q Consensus 221 ~v~~l~~~~~~~-~l~s~~~d~~v~iwd~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~ 274 (494)
.|.+++|+|++. +|++++.|++|++||+++++..... .+|... +..+.|.+.+
T Consensus 188 ~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~-v~~v~~~~~d 266 (393)
T 4gq1_A 188 PGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASS-LANVRWIGSD 266 (393)
T ss_dssp CEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSS-CSEEEEETTT
T ss_pred CcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccccccc-ceeeeeecCC
Confidence 999999999874 8999999999999999987643322 234444 7788888555
Q ss_pred CeEEEEEecCCCCceEEEEeCCCCCCceeEe----------------eecCCCceEEeEEe-CCCCEEEEEEeCCCcEEE
Q psy14130 275 GRIVTTGFSRHSDRQVGLWDENDLNTPLALE----------------TVDSSSGVLFPYYD-HDTRILFLAGKGDGNIRY 337 (494)
Q Consensus 275 ~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~----------------~~~~~~~v~~~~~~-~~~~~l~~~g~~dg~i~~ 337 (494)
+..++++ +.|+++++||+........+. ............++ +.++.++++|+.||.|++
T Consensus 267 g~~l~s~---s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~l 343 (393)
T 4gq1_A 267 GSGILAM---CKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQL 343 (393)
T ss_dssp TCEEEEE---CTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEE
T ss_pred CCEEEEE---eCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEE
Confidence 6666777 699999999987543322111 11111122223333 445666688999999999
Q ss_pred EEeeCCCceEEecccccCCCCeeEEEEecCCceeeec-cceeEEEEeeC
Q psy14130 338 YELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ-CEIFRFFKLHT 385 (494)
Q Consensus 338 wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~-~~~~~~~~l~~ 385 (494)
||+.+++....... +..+|++++|+|+|..++++ ++-+.+|+|..
T Consensus 344 wd~~~~~~~~~~~~---~~~~V~svafspdG~~LA~as~~Gv~lvrL~g 389 (393)
T 4gq1_A 344 INTYEKDSNSIPIQ---LGMPIVDFCWHQDGSHLAIATEGSVLLTRLMG 389 (393)
T ss_dssp EETTCTTCCEEEEE---CSSCEEEEEECTTSSEEEEEESSEEEEEEEGG
T ss_pred EECCCCcEEEEecC---CCCcEEEEEEcCCCCEEEEEeCCCeEEEEEeC
Confidence 99999887655433 35789999999999998886 67778887754
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=99.97 E-value=7.2e-29 Score=237.10 Aligned_cols=206 Identities=11% Similarity=0.017 Sum_probs=161.6
Q ss_pred CcEEEEEc-CCCCCCCCcccceEeccc--ccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCC---------CeEEEEec
Q psy14130 149 HRVKLWYI-PDGGLSGNLNEWIMDLHG--HKRRVGYIEWHPTAENVVASAGFDYLIILWDVGK---------GEALTVID 216 (494)
Q Consensus 149 ~~v~iw~~-~~~~~~~~~~~~~~~~~~--h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~---------~~~~~~~~ 216 (494)
+.|++||+ .++. ...+.+ |...|.+++|+| + .+|++++.|+.|++||+++ ++++..+.
T Consensus 79 g~i~~wd~~~~~~--------~~~~~~~~~~~~v~~l~~~~-~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 148 (342)
T 1yfq_A 79 GEILKVDLIGSPS--------FQALTNNEANLGICRICKYG-D-DKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK 148 (342)
T ss_dssp SCEEEECSSSSSS--------EEECBSCCCCSCEEEEEEET-T-TEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS
T ss_pred CeEEEEEeccCCc--------eEeccccCCCCceEEEEeCC-C-CEEEEEcCCCeEEEEcccccccccccccCCeeeEEe
Confidence 47999999 7652 267778 999999999999 6 7999999999999999987 66666666
Q ss_pred CCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCC-Cc--eEEEeeecCCCCceEEEEEC-CCCeEEEEEecCCCCceEEE
Q psy14130 217 CHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRT-GL--VISQGVCHPGTRSSKAVFIG-DTGRIVTTGFSRHSDRQVGL 292 (494)
Q Consensus 217 ~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~-~~--~~~~~~~~~~~~~~~~~~~~-~~~~l~~~g~~~~~d~~i~i 292 (494)
|...|.+++|+|++ +++++.|+.|++||+++ +. .......|... +..+.|+| ++ .++++| +.|+.|++
T Consensus 149 -~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~-i~~i~~~~~~~-~~l~~~---~~dg~i~i 220 (342)
T 1yfq_A 149 -VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQ-IRDVALLPKEQ-EGYACS---SIDGRVAV 220 (342)
T ss_dssp -SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSC-EEEEEECSGGG-CEEEEE---ETTSEEEE
T ss_pred -eCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCc-eeEEEECCCCC-CEEEEE---ecCCcEEE
Confidence 89999999999887 99999999999999998 55 23334455555 89999999 74 455555 48999999
Q ss_pred EeCCCC------CCceeEeeec-------CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCe
Q psy14130 293 WDENDL------NTPLALETVD-------SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQ 359 (494)
Q Consensus 293 wd~~~~------~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v 359 (494)
||++.. .....+.... +...+.+++|+|++++| ++|+.||.|++||+.+++.+..+. .+ +..+|
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l-~~~~~dg~i~vwd~~~~~~~~~~~-~~-h~~~v 297 (342)
T 1yfq_A 221 EFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFL-YTAGSDGIISCWNLQTRKKIKNFA-KF-NEDSV 297 (342)
T ss_dssp EECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCE-EEEETTSCEEEEETTTTEEEEECC-CC-SSSEE
T ss_pred EEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEE-EEecCCceEEEEcCccHhHhhhhh-cc-cCCCc
Confidence 999875 3322222211 12389999999999998 899999999999999988654432 21 15789
Q ss_pred eEEEEecCCceeeec--cce
Q psy14130 360 RGLGFMPKRGCDVTQ--CEI 377 (494)
Q Consensus 360 ~~~~~~p~~~~~~~~--~~~ 377 (494)
.+++ |++..++++ |+.
T Consensus 298 ~~~~--~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 298 VKIA--CSDNILCLATSDDT 315 (342)
T ss_dssp EEEE--ECSSEEEEEEECTH
T ss_pred eEec--CCCCeEEEEecCCc
Confidence 9999 999888775 555
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-29 Score=266.61 Aligned_cols=209 Identities=17% Similarity=0.205 Sum_probs=170.3
Q ss_pred ecccccccEEEEEEcCC--CCCEEEEEeCCCeEEEEECCCCe--EEEEecCCCCceEEEEEcCC--CCEEEEEeCCCeEE
Q psy14130 171 DLHGHKRRVGYIEWHPT--AENVVASAGFDYLIILWDVGKGE--ALTVIDCHPDVINCLSFNRD--GSRLVTTCKDKTVR 244 (494)
Q Consensus 171 ~~~~h~~~V~~~~~~p~--~~~~l~s~s~d~~v~iwd~~~~~--~~~~~~~h~~~v~~l~~~~~--~~~l~s~~~d~~v~ 244 (494)
.+.+|.+.|.+++|+|+ + ++|++|+.||.|++||+.+++ .+..+.+|...|++++|+|+ +..+++|+.||.|+
T Consensus 48 ~l~~h~~~V~~l~~s~~~~~-~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~ 126 (753)
T 3jro_A 48 TLTGHEGPVWRVDWAHPKFG-TILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVS 126 (753)
T ss_dssp EECCCSSCEEEEEECCTTSC-SEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEE
T ss_pred eccCCcCceEEEEecCCCCC-CEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEE
Confidence 45569999999999987 6 799999999999999999987 67788899999999999999 99999999999999
Q ss_pred EEeCCCCc--eEEEeeecCCCCceEEEEECC------------CCeEEEEEecCCCCceEEEEeCCCCCCceeE--eeec
Q psy14130 245 VLDPRTGL--VISQGVCHPGTRSSKAVFIGD------------TGRIVTTGFSRHSDRQVGLWDENDLNTPLAL--ETVD 308 (494)
Q Consensus 245 iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~------------~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~--~~~~ 308 (494)
+||++++. ....+..|... +..+.|+|. ++.++++| +.||.|++||+++....... ....
T Consensus 127 vwdl~~~~~~~~~~~~~~~~~-v~~l~~~p~~~~~~~~~~~~~d~~~l~sg---s~dg~I~iwd~~~~~~~~~~~~~~~~ 202 (753)
T 3jro_A 127 VVEFKENGTTSPIIIDAHAIG-VNSASWAPATIEEDGEHNGTKESRKFVTG---GADNLVKIWKYNSDAQTYVLESTLEG 202 (753)
T ss_dssp EEECCSSSCCCCEEEECCSSC-EEEEEECCCC---------CGGGCCEEEE---ETTSCEEEEEEETTTTEEEEEEEECC
T ss_pred EEEeecCCCcceeEeecCCCc-eEEEEecCcccccccccccCCCCCEEEEE---ECCCeEEEEeccCCcccceeeeeecC
Confidence 99999874 44556778777 999999994 24555555 58999999999876543221 2234
Q ss_pred CCCceEEeEEeCC---CCEEEEEEeCCCcEEEEEeeCCCce--EEecccccCCCCeeEEEEecCCceeeec--cceeEEE
Q psy14130 309 SSSGVLFPYYDHD---TRILFLAGKGDGNIRYYELTNERPY--IHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFF 381 (494)
Q Consensus 309 ~~~~v~~~~~~~~---~~~l~~~g~~dg~i~~wd~~~~~~~--~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~ 381 (494)
|...|.+++|+|+ ++++ ++|+.||.|++||+.+++.. ........+...|.+++|+|++..++++ |+.+++|
T Consensus 203 h~~~V~~l~~sp~~~~~~~l-~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vw 281 (753)
T 3jro_A 203 HSDWVRDVAWSPTVLLRSYL-ASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLW 281 (753)
T ss_dssp CSSCEEEEEECCCCSSSEEE-EEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECC
T ss_pred CCCcEEEEEeccCCCCCCEE-EEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEE
Confidence 6688999999999 6776 99999999999999987421 1122233356789999999999988874 8999999
Q ss_pred EeeC
Q psy14130 382 KLHT 385 (494)
Q Consensus 382 ~l~~ 385 (494)
++..
T Consensus 282 d~~~ 285 (753)
T 3jro_A 282 KENL 285 (753)
T ss_dssp BCCS
T ss_pred ecCC
Confidence 9985
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.4e-29 Score=244.44 Aligned_cols=192 Identities=12% Similarity=-0.002 Sum_probs=152.8
Q ss_pred cccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCC-----ceEEEEEcCCCCEEEEEeCCCeEEEEeC
Q psy14130 174 GHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPD-----VINCLSFNRDGSRLVTTCKDKTVRVLDP 248 (494)
Q Consensus 174 ~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~-----~v~~l~~~~~~~~l~s~~~d~~v~iwd~ 248 (494)
+|...|.+++|+|+| ..||+++.||.|++||.+. .+..+. |.. .|.+++|+|||++|++|+.||+|++||+
T Consensus 83 ~~~~~V~~vawSPdG-~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~ 158 (588)
T 2j04_A 83 QPVCYPRVCKPSPID-DWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSI 158 (588)
T ss_dssp SCSCCEEEEEECSSS-SCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEEC
T ss_pred CCCCcEEEEEECCCC-CEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEEC
Confidence 468899999999999 7999999999999999643 666777 665 4999999999999999999999999999
Q ss_pred CCCce-------EEEe----eecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee--cCCCceEE
Q psy14130 249 RTGLV-------ISQG----VCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV--DSSSGVLF 315 (494)
Q Consensus 249 ~~~~~-------~~~~----~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~--~~~~~v~~ 315 (494)
.++.. +.++ .+|... +.+++|+|++ +++++ .|+.|++||+.+.........+ .|...|.+
T Consensus 159 ~~~~l~~~~~i~l~ti~~~~~gh~~~-V~sVawSPdg--Laass----~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~s 231 (588)
T 2j04_A 159 RKNSENTPEFYFESSIRLSDAGSKDW-VTHIVWYEDV--LVAAL----SNNSVFSMTVSASSHQPVSRMIQNASRRKITD 231 (588)
T ss_dssp CCCTTTCCCCEEEEEEECSCTTCCCC-EEEEEEETTE--EEEEE----TTCCEEEECCCSSSSCCCEEEEECCCSSCCCC
T ss_pred CCCccccccceeeeeeeccccccccc-EEEEEEcCCc--EEEEe----CCCeEEEEECCCCccccceeeecccccCcEEE
Confidence 98863 5666 455555 9999999985 66665 8999999999875532111112 35578999
Q ss_pred eEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEE--ecCCceeeec--cceeEEEEee
Q psy14130 316 PYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGF--MPKRGCDVTQ--CEIFRFFKLH 384 (494)
Q Consensus 316 ~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~--~p~~~~~~~~--~~~~~~~~l~ 384 (494)
++|+ ++.| ++++ ++.|++||+.+++...... .+...+.+++| +|++..++++ ++. |+|.++
T Consensus 232 vaFs--g~~L-ASa~-~~tIkLWd~~~~~~~~~~~---gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 232 LKIV--DYKV-VLTC-PGYVHKIDLKNYSISSLKT---GSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp EEEE--TTEE-EEEC-SSEEEEEETTTTEEEEEEC---SCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred EEEE--CCEE-EEEe-CCeEEEEECCCCeEEEEEc---CCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 9999 5777 6665 7999999999877522222 35788999999 9999887775 666 899875
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=99.97 E-value=9e-29 Score=243.60 Aligned_cols=220 Identities=15% Similarity=0.177 Sum_probs=179.7
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEE
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSF 227 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~ 227 (494)
.+.|++||+.++ .....+.+|...|.+++|+|++ .+|++|+.|++|++||+.+++.+..+.+|...|.+++|
T Consensus 118 dg~i~iwd~~~~-------~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~ 189 (420)
T 3vl1_A 118 EGDIKVLDSNFN-------LQREIDQAHVSEITKLKFFPSG-EALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAI 189 (420)
T ss_dssp TSCEEEECTTSC-------EEEEETTSSSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEE
T ss_pred CCCEEEEeCCCc-------ceeeecccccCccEEEEECCCC-CEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEE
Confidence 347999999877 6677788999999999999998 79999999999999999999999999999999999999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecC---CCCceEE---------------------EEECCCCeEEEEEec
Q psy14130 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHP---GTRSSKA---------------------VFIGDTGRIVTTGFS 283 (494)
Q Consensus 228 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~---~~~~~~~---------------------~~~~~~~~l~~~g~~ 283 (494)
+|++++|++++.|+.|++||+++++.+..+..|. .. +..+ .|+|+ +.++++|
T Consensus 190 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~-- 265 (420)
T 3vl1_A 190 IDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDG-VNSIALFVGTDRQLHEISTSKKNNLEFGTY-GKYVIAG-- 265 (420)
T ss_dssp ETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCC-EEEEEEEECCCSSCGGGCCCCCCTTCSSCT-TEEEEEE--
T ss_pred cCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCC-ccEEEEecCCcceeeecccCcccceEEcCC-CCEEEEE--
Confidence 9999999999999999999999999888887542 22 3444 44566 5666666
Q ss_pred CCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCC-EEEEEEeCCCcEEEEEeeCCCc-eEEecccccCCCCeeE
Q psy14130 284 RHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTR-ILFLAGKGDGNIRYYELTNERP-YIHFLNQSLSGAPQRG 361 (494)
Q Consensus 284 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~g~~dg~i~~wd~~~~~~-~~~~~~~~~~~~~v~~ 361 (494)
+.|+.|++||+++....... ...+...+.+++|+|+++ +| ++|+.||.|++||+++++. +..+... +..++.+
T Consensus 266 -~~dg~i~i~d~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l-~~g~~dg~i~vwd~~~~~~~~~~~~~~--~~~~v~~ 340 (420)
T 3vl1_A 266 -HVSGVITVHNVFSKEQTIQL-PSKFTCSCNSLTVDGNNANYI-YAGYENGMLAQWDLRSPECPVGEFLIN--EGTPINN 340 (420)
T ss_dssp -ETTSCEEEEETTTCCEEEEE-CCTTSSCEEEEEECSSCTTEE-EEEETTSEEEEEETTCTTSCSEEEEES--TTSCEEE
T ss_pred -cCCCeEEEEECCCCceeEEc-ccccCCCceeEEEeCCCCCEE-EEEeCCCeEEEEEcCCCcCchhhhhcc--CCCCceE
Confidence 58999999999876543332 234567899999999999 55 9999999999999998754 3333222 3567888
Q ss_pred EEEecCCceeeec--cceeEEEEeeC
Q psy14130 362 LGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 362 ~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
+.|. ++.+++++ |+.+++|++..
T Consensus 341 ~~~~-~~~~l~s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 341 VYFA-AGALFVSSGFDTSIKLDIISD 365 (420)
T ss_dssp EEEE-TTEEEEEETTTEEEEEEEECC
T ss_pred EEeC-CCCEEEEecCCccEEEEeccC
Confidence 8665 56666664 89999999987
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-28 Score=257.31 Aligned_cols=224 Identities=16% Similarity=0.224 Sum_probs=184.6
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEE
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSF 227 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~ 227 (494)
+++|+||++.+.... .......+.+|...|.+++|+|++ ++|++|+.|++|++||+.+++.+..+.+|...|.+++|
T Consensus 404 D~~i~~W~~~~~~~~--~~~~~~~~~~h~~~v~~v~~s~~g-~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~ 480 (694)
T 3dm0_A 404 DKSIILWKLTKDDKA--YGVAQRRLTGHSHFVEDVVLSSDG-QFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAF 480 (694)
T ss_dssp TSEEEEEECCCSTTC--SCEEEEEEECCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE
T ss_pred CCcEEEEEccCCCcc--cccccceecCCCCcEEEEEECCCC-CEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEE
Confidence 457999999865321 113456788999999999999998 79999999999999999999999999999999999999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceEEEe---eecCCCCceEEEEECCCC-eEEEEEecCCCCceEEEEeCCCCCCcee
Q psy14130 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQG---VCHPGTRSSKAVFIGDTG-RIVTTGFSRHSDRQVGLWDENDLNTPLA 303 (494)
Q Consensus 228 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~d~~i~iwd~~~~~~~~~ 303 (494)
+|++++|++++.|++|++||+......... .+|... +.++.|+|++. .++++| +.|+.|++||+++.....
T Consensus 481 s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~-v~~~~~~~~~~~~~l~s~---s~d~~v~vwd~~~~~~~~- 555 (694)
T 3dm0_A 481 SLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDW-VSCVRFSPNTLQPTIVSA---SWDKTVKVWNLSNCKLRS- 555 (694)
T ss_dssp CTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSC-EEEEEECSCSSSCEEEEE---ETTSCEEEEETTTCCEEE-
T ss_pred eCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCc-EEEEEEeCCCCcceEEEE---eCCCeEEEEECCCCcEEE-
Confidence 999999999999999999998755433222 356666 89999999853 456666 599999999998754322
Q ss_pred EeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec-cceeEEEE
Q psy14130 304 LETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ-CEIFRFFK 382 (494)
Q Consensus 304 ~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~-~~~~~~~~ 382 (494)
....|...|.+++|+|++++| ++|+.||.|++||+++++.+.. +.....+.+++|+|++.+++++ ++.+++|+
T Consensus 556 -~~~~h~~~v~~v~~spdg~~l-~sg~~Dg~i~iwd~~~~~~~~~----~~~~~~v~~~~~sp~~~~l~~~~~~~i~iwd 629 (694)
T 3dm0_A 556 -TLAGHTGYVSTVAVSPDGSLC-ASGGKDGVVLLWDLAEGKKLYS----LEANSVIHALCFSPNRYWLCAATEHGIKIWD 629 (694)
T ss_dssp -EECCCSSCEEEEEECTTSSEE-EEEETTSBCEEEETTTTEEEEC----CBCSSCEEEEEECSSSSEEEEEETTEEEEEE
T ss_pred -EEcCCCCCEEEEEEeCCCCEE-EEEeCCCeEEEEECCCCceEEE----ecCCCcEEEEEEcCCCcEEEEEcCCCEEEEE
Confidence 223467889999999999998 9999999999999999876432 2335679999999999887775 78899999
Q ss_pred eeC
Q psy14130 383 LHT 385 (494)
Q Consensus 383 l~~ 385 (494)
+..
T Consensus 630 ~~~ 632 (694)
T 3dm0_A 630 LES 632 (694)
T ss_dssp TTT
T ss_pred CCC
Confidence 987
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-28 Score=239.52 Aligned_cols=186 Identities=12% Similarity=0.139 Sum_probs=152.6
Q ss_pred CcEEEEEcCC------CCCCCCcccceEec-------ccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEe
Q psy14130 149 HRVKLWYIPD------GGLSGNLNEWIMDL-------HGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVI 215 (494)
Q Consensus 149 ~~v~iw~~~~------~~~~~~~~~~~~~~-------~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~ 215 (494)
+.|++||+.+ +.... ..+...+ ..|...|.+++|+|++ +|++++.|+.|++||+++++.+..+
T Consensus 148 g~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~ 223 (397)
T 1sq9_A 148 GTTYIWKFHPFADESNSLTLN--WSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELSTLRPLYNF 223 (397)
T ss_dssp SCEEEEEEESSSSHHHHTTTC--CCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTTTEEEEEE
T ss_pred CcEEEEeCCccccccccceee--ccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCCCceeEEE
Confidence 4799999988 53221 0111245 4489999999999997 9999999999999999999999999
Q ss_pred cC---C---CCceEEEEEcCCCCEEEEEeCC---CeEEEEeCCCCceEEEeee-------------cCCCCceEEEEECC
Q psy14130 216 DC---H---PDVINCLSFNRDGSRLVTTCKD---KTVRVLDPRTGLVISQGVC-------------HPGTRSSKAVFIGD 273 (494)
Q Consensus 216 ~~---h---~~~v~~l~~~~~~~~l~s~~~d---~~v~iwd~~~~~~~~~~~~-------------~~~~~~~~~~~~~~ 273 (494)
.. | ...|.+++|+|++++|++++.| +.|++||+++++.+..+.. |... +..+.|+|+
T Consensus 224 ~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~ 302 (397)
T 1sq9_A 224 ESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSW-VMSLSFNDS 302 (397)
T ss_dssp ECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSC-EEEEEECSS
T ss_pred eccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCc-EEEEEECCC
Confidence 98 9 9999999999999999999999 9999999999999999988 8877 999999998
Q ss_pred CCeEEEEEecCCCCceEEEEeCCCCCCceeEeee----cC---------------CCceEEeEEeCCC----------CE
Q psy14130 274 TGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV----DS---------------SSGVLFPYYDHDT----------RI 324 (494)
Q Consensus 274 ~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~----~~---------------~~~v~~~~~~~~~----------~~ 324 (494)
+. ++++| +.|+.|++||+++......+... .+ ...|.+++|+|++ ++
T Consensus 303 ~~-~l~~~---~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~ 378 (397)
T 1sq9_A 303 GE-TLCSA---GWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNES 378 (397)
T ss_dssp SS-EEEEE---ETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCE
T ss_pred CC-EEEEE---eCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccce
Confidence 55 55555 48999999999876543333200 24 6789999999998 56
Q ss_pred EEEEEeCCCcEEEEEeeCCC
Q psy14130 325 LFLAGKGDGNIRYYELTNER 344 (494)
Q Consensus 325 l~~~g~~dg~i~~wd~~~~~ 344 (494)
| ++|+.||.|++||+.+++
T Consensus 379 l-~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 379 L-CCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp E-EEEETTTEEEEEEEEC--
T ss_pred E-EEecCCCcEEEEEcCCCC
Confidence 6 999999999999998864
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=99.97 E-value=6.3e-28 Score=249.40 Aligned_cols=329 Identities=12% Similarity=0.075 Sum_probs=213.5
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecc----cccccccCcccccccccceeecCC--ceEEEEEEEecC
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSK----RDGCYDNVPITRNAHDSHFCAANP--KFVAVVTEVAGG 76 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 76 (494)
.+|.+.|++++|+| ++++|++++ |+.|+ +|+.... +. ...+...... .-..++.++ +...++. ...+
T Consensus 15 ~~~~~~v~~~~~sp-dg~~l~~~~-~~~v~-v~~~~~~~~~~~~--~~~~~~h~~~-~v~~~~~sp~~~~~~l~s-~~~d 87 (615)
T 1pgu_A 15 STQRNFTTHLSYDP-TTNAIAYPC-GKSAF-VRCLDDGDSKVPP--VVQFTGHGSS-VVTTVKFSPIKGSQYLCS-GDES 87 (615)
T ss_dssp CCCTTCCCCCEEET-TTTEEEEEE-TTEEE-EEECCSSCCSSCS--EEEECTTTTS-CEEEEEECSSTTCCEEEE-EETT
T ss_pred CCccCceeEEEECC-CCCEEEEec-CCeEE-EEECCCCCCcccc--ceEEecCCCc-eEEEEEECcCCCCCEEEE-ecCC
Confidence 68999999999999 899999999 88998 8887643 21 1111110000 011122333 2222222 2234
Q ss_pred ceEEEEeccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEc-----CcE
Q psy14130 77 GAFLVLPIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPI-----HRV 151 (494)
Q Consensus 77 g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-----~~v 151 (494)
|.+.++.+........ . .......+ .........+.++|+ +..+++... +.|
T Consensus 88 g~v~vw~~~~~~~~~~--~---------~~~~~~~~--~~~~~~v~~~~~s~~----------~~~l~~~~~~~~~~~~v 144 (615)
T 1pgu_A 88 GKVIVWGWTFDKESNS--V---------EVNVKSEF--QVLAGPISDISWDFE----------GRRLCVVGEGRDNFGVF 144 (615)
T ss_dssp SEEEEEEEEEEGGGTE--E---------EEEEEEEE--ECCSSCEEEEEECTT----------SSEEEEEECCSSCSEEE
T ss_pred CEEEEEeCCCCccccc--c---------cccccchh--hcccccEEEEEEeCC----------CCEEEEeccCCCCccEE
Confidence 4444444321000000 0 00000000 011122223333332 222333222 257
Q ss_pred EEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCC---ceEEEEEc
Q psy14130 152 KLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPD---VINCLSFN 228 (494)
Q Consensus 152 ~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~---~v~~l~~~ 228 (494)
.+|| .+ ..+..+.+|...|.+++|+|++..++++++.|+.|++||+.+++.+..+.+|.. .|.+++|+
T Consensus 145 ~~~d--~~-------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 215 (615)
T 1pgu_A 145 ISWD--SG-------NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFS 215 (615)
T ss_dssp EETT--TC-------CEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEEC
T ss_pred EEEE--CC-------CcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEEC
Confidence 7777 44 566788899999999999999855899999999999999999999999999999 99999999
Q ss_pred CC-CCEEEEEeCCCeEEEEeCCCCceEEEe-e---ecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCcee
Q psy14130 229 RD-GSRLVTTCKDKTVRVLDPRTGLVISQG-V---CHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLA 303 (494)
Q Consensus 229 ~~-~~~l~s~~~d~~v~iwd~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~ 303 (494)
|+ +++|++++.|+.|++||+++++.+..+ . .|... +..+.|+ + +.+++++ +.|+.|++||+++......
T Consensus 216 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~-v~~~~~~-~-~~~l~~~---~~d~~i~~wd~~~~~~~~~ 289 (615)
T 1pgu_A 216 PDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGG-IFALSWL-D-SQKFATV---GADATIRVWDVTTSKCVQK 289 (615)
T ss_dssp STTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSC-EEEEEES-S-SSEEEEE---ETTSEEEEEETTTTEEEEE
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCc-eEEEEEc-C-CCEEEEE---cCCCcEEEEECCCCcEEEE
Confidence 99 999999999999999999999999888 5 78777 8999999 6 4555555 4899999999987544332
Q ss_pred Eeeec--CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccceeEEE
Q psy14130 304 LETVD--SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFF 381 (494)
Q Consensus 304 ~~~~~--~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~ 381 (494)
+.... ....+..+.|. +++.+ ++|+.||.|++||+.+++++..+. . +..+|.+++| |+ ....+.|+.+++|
T Consensus 290 ~~~~~~~~~~~~~~~~~~-~~~~l-~~~~~~g~i~~~d~~~~~~~~~~~-~--~~~~v~~~~~-~~-l~~~~~dg~i~~w 362 (615)
T 1pgu_A 290 WTLDKQQLGNQQVGVVAT-GNGRI-ISLSLDGTLNFYELGHDEVLKTIS-G--HNKGITALTV-NP-LISGSYDGRIMEW 362 (615)
T ss_dssp EECCTTCGGGCEEEEEEE-ETTEE-EEEETTSCEEEEETTEEEEEEEEC-C--CSSCEEEEET-TT-TEEEETTSCEEET
T ss_pred EcCCCCcccCceeEEEeC-CCCeE-EEEECCCCEEEEECCCCcEEEEEe-C--CCCCEEEEEe-cC-cEEECCCCeEEEE
Confidence 22110 12556777775 88888 889999999999999876644332 2 3455666666 65 2222235555555
Q ss_pred Ee
Q psy14130 382 KL 383 (494)
Q Consensus 382 ~l 383 (494)
++
T Consensus 363 ~~ 364 (615)
T 1pgu_A 363 SS 364 (615)
T ss_dssp TT
T ss_pred Ec
Confidence 43
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.6e-28 Score=239.49 Aligned_cols=183 Identities=19% Similarity=0.300 Sum_probs=152.5
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe----EEEEecCCCCceEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE----ALTVIDCHPDVINCL 225 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~----~~~~~~~h~~~v~~l 225 (494)
.+++||..... ..+..+.+|...+.++.|+|++ .++++++.|+.+++||..+++ .+.....|...|.++
T Consensus 210 ~i~~~d~~~~~------~~~~~~~~h~~~~~~~~~~~~g-~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~ 282 (420)
T 4gga_A 210 HIHHHDVRVAE------HHVATLSGHSQEVCGLRWAPDG-RHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAV 282 (420)
T ss_dssp EEEEEETTSSS------CEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEE
T ss_pred ceeEeeecccc------eeeEEecccccceeeeeecCCC-CeeeeeeccccceEEeeccccccceeeeeecccCCceeee
Confidence 69999987653 4567788999999999999998 799999999999999998765 356677899999999
Q ss_pred EEcCCCC-EEEEE--eCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCce
Q psy14130 226 SFNRDGS-RLVTT--CKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPL 302 (494)
Q Consensus 226 ~~~~~~~-~l~s~--~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~ 302 (494)
+|+|++. +++++ +.|++|++||+++++++..+..|.. +..+.|.+++..+++++. ..|+.|+|||+++.....
T Consensus 283 ~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~--v~~~~~~~~~~~lv~~sg--~~d~~I~iwd~~~~~~v~ 358 (420)
T 4gga_A 283 AWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQ--VCSILWSPHYKELISGHG--FAQNQLVIWKYPTMAKVA 358 (420)
T ss_dssp EECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSC--EEEEEEETTTTEEEEEEC--TTTCCEEEEETTTCCEEE
T ss_pred eeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccc--eeeeeecCCCCeEEEEEe--cCCCEEEEEECCCCcEEE
Confidence 9999654 55554 4799999999999999888887654 789999999888776641 478999999998865433
Q ss_pred eEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCce
Q psy14130 303 ALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPY 346 (494)
Q Consensus 303 ~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~ 346 (494)
.+ ..|...|.+++|+|||++| ++|+.|++|++||+....+.
T Consensus 359 ~l--~gH~~~V~~l~~spdg~~l-~S~s~D~tvriWdv~~~~~~ 399 (420)
T 4gga_A 359 EL--KGHTSRVLSLTMSPDGATV-ASAAADETLRLWRCFELDPA 399 (420)
T ss_dssp EE--CCCSSCEEEEEECTTSSCE-EEEETTTEEEEECCSCSSCC
T ss_pred EE--cCCCCCEEEEEEcCCCCEE-EEEecCCeEEEEECCCCCcc
Confidence 33 2467899999999999999 99999999999999876553
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=99.97 E-value=9.2e-29 Score=240.56 Aligned_cols=182 Identities=21% Similarity=0.293 Sum_probs=140.2
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCC----CeEEEEecCCCCceEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGK----GEALTVIDCHPDVINC 224 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~----~~~~~~~~~h~~~v~~ 224 (494)
+.|++||+. + +++..+.+|...|.+++|+|++..+|++|+.|+.|++||+++ +..+..+ +|...|.+
T Consensus 185 ~~i~i~d~~-~-------~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~ 255 (383)
T 3ei3_B 185 GRLLLLGLD-G-------HEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNA 255 (383)
T ss_dssp SEEEEEETT-S-------CEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEE
T ss_pred CCEEEEECC-C-------CEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEE
Confidence 479999984 4 567788899999999999999844999999999999999987 6666666 59999999
Q ss_pred EEEcC-CCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCC-----CceEEEEECCCCeEEEEEe------cCCCCceEEE
Q psy14130 225 LSFNR-DGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGT-----RSSKAVFIGDTGRIVTTGF------SRHSDRQVGL 292 (494)
Q Consensus 225 l~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~g~------~~~~d~~i~i 292 (494)
++|+| ++++|++++.|+.|++||+++++....+..|... ....+.|+|+ +.++++++ +.+.|+.|++
T Consensus 256 ~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~s~dg~~s~s~d~~i~i 334 (383)
T 3ei3_B 256 AYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPM-YDLIVAGRYPDDQLLLNDKRTIDI 334 (383)
T ss_dssp EEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSS-SSEEEEECBCCTTTCTTCCCCEEE
T ss_pred EEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCC-CCceEEEecCCcccccCCCCeEEE
Confidence 99999 9999999999999999999999877777765421 0122345444 22333222 1158999999
Q ss_pred EeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeC
Q psy14130 293 WDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTN 342 (494)
Q Consensus 293 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~ 342 (494)
||+++......+....+...+..++|+|++++| ++|+ ||.|++||+++
T Consensus 335 wd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l-~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 335 YDANSGGLVHQLRDPNAAGIISLNKFSPTGDVL-ASGM-GFNILIWNRED 382 (383)
T ss_dssp EETTTCCEEEEECBTTBCSCCCEEEECTTSSEE-EEEE-TTEEEEEECC-
T ss_pred EecCCCceeeeecCCCCCceEEEEEEecCccEE-EEec-CCcEEEEecCC
Confidence 999886553333322234556667999999998 7776 99999999875
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=99.97 E-value=5.8e-28 Score=238.71 Aligned_cols=229 Identities=16% Similarity=0.240 Sum_probs=184.5
Q ss_pred cEEEEEcCCCCCCC---CcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeE-------EEEecCCC
Q psy14130 150 RVKLWYIPDGGLSG---NLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEA-------LTVIDCHP 219 (494)
Q Consensus 150 ~v~iw~~~~~~~~~---~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~-------~~~~~~h~ 219 (494)
.|++|++.+..... ....++..+.+|...|.+++|+|++..+|++|+.||.|++||+.++.. ...+.+|.
T Consensus 152 ~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~ 231 (430)
T 2xyi_A 152 DVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHT 231 (430)
T ss_dssp CEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCS
T ss_pred cEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCC
Confidence 69999997621110 001566788899999999999999855999999999999999987421 45677899
Q ss_pred CceEEEEEcC-CCCEEEEEeCCCeEEEEeCCCC---ceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeC
Q psy14130 220 DVINCLSFNR-DGSRLVTTCKDKTVRVLDPRTG---LVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDE 295 (494)
Q Consensus 220 ~~v~~l~~~~-~~~~l~s~~~d~~v~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~ 295 (494)
..|.+++|+| ++.+|++++.|+.|++||++++ +.+..+..|... +.+++|+|++..++++| +.|+.|++||+
T Consensus 232 ~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~-v~~i~~~p~~~~~l~tg---~~dg~v~vwd~ 307 (430)
T 2xyi_A 232 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAE-VNCLSFNPYSEFILATG---SADKTVALWDL 307 (430)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSC-EEEEEECSSCTTEEEEE---ETTSEEEEEET
T ss_pred CCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCC-eEEEEeCCCCCCEEEEE---eCCCeEEEEeC
Confidence 9999999999 7889999999999999999987 567777888877 99999999977788888 69999999999
Q ss_pred CCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCC-------------ceEEecccccCCCCeeEE
Q psy14130 296 NDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNER-------------PYIHFLNQSLSGAPQRGL 362 (494)
Q Consensus 296 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~-------------~~~~~~~~~~~~~~v~~~ 362 (494)
++...+.... ..|...|.+++|+|+++.++++++.||.|++||+.... .+... ...+...|+++
T Consensus 308 ~~~~~~~~~~-~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~--~~~h~~~v~~~ 384 (430)
T 2xyi_A 308 RNLKLKLHSF-ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFI--HGGHTAKISDF 384 (430)
T ss_dssp TCTTSCSEEE-ECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEE--CCCCSSCEEEE
T ss_pred CCCCCCeEEe-ecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEE--cCCCCCCceEE
Confidence 9855443332 24678899999999998776999999999999998732 11111 12345679999
Q ss_pred EEecCCc-eeeec--cceeEEEEeeC
Q psy14130 363 GFMPKRG-CDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 363 ~~~p~~~-~~~~~--~~~~~~~~l~~ 385 (494)
+|+|++. +++++ |+.+++|++..
T Consensus 385 ~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 385 SWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp EECSSSTTEEEEEETTSEEEEEEECH
T ss_pred EECCCCCCEEEEEECCCCEEEeEccc
Confidence 9999998 66553 89999999876
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.3e-28 Score=233.80 Aligned_cols=218 Identities=13% Similarity=0.130 Sum_probs=160.4
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEE--cCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEW--HPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLS 226 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~--~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~ 226 (494)
+.|++||+.++ +.. .+.+|...|.+++| +|++ .+|++++.|+.|++||+++++.+..+..+. .+.++.
T Consensus 108 g~v~iwd~~~~-------~~~-~~~~~~~~v~~~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~ 177 (368)
T 3mmy_A 108 KTAKMWDLSSN-------QAI-QIAQHDAPVKTIHWIKAPNY-SCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCYCAD 177 (368)
T ss_dssp SEEEEEETTTT-------EEE-EEEECSSCEEEEEEEECSSC-EEEEEEETTSEEEEECSSCSSCSEEEECSS-CEEEEE
T ss_pred CcEEEEEcCCC-------Cce-eeccccCceEEEEEEeCCCC-CEEEEccCCCcEEEEECCCCcEEEEEecCC-CceEEE
Confidence 36999999887 333 35679999999999 8887 799999999999999999999888888664 666777
Q ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCceEEE-eeecCCCCceEEEEECCCC---eEEEEEecCCCCceEEEEeCCCCCCce
Q psy14130 227 FNRDGSRLVTTCKDKTVRVLDPRTGLVISQ-GVCHPGTRSSKAVFIGDTG---RIVTTGFSRHSDRQVGLWDENDLNTPL 302 (494)
Q Consensus 227 ~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~l~~~g~~~~~d~~i~iwd~~~~~~~~ 302 (494)
+. +..+++++.++.+++||++....... ...........+.+.+... ..+++| +.|+.|++||++......
T Consensus 178 ~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~dg~i~i~~~~~~~~~~ 252 (368)
T 3mmy_A 178 VI--YPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALG---SIEGRVAIHYINPPNPAK 252 (368)
T ss_dssp EE--TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEE---ETTSEEEEEESSCSCHHH
T ss_pred ec--CCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEe---cCCCcEEEEecCCCCccc
Confidence 76 45889999999999999987763332 2222222244555554422 225555 589999999998753211
Q ss_pred eEeeecCC-C------------ceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCc
Q psy14130 303 ALETVDSS-S------------GVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRG 369 (494)
Q Consensus 303 ~~~~~~~~-~------------~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ 369 (494)
....+..+ . .+.+++|+|++++| ++|+.||.|++||+.+++.+..+. .+..+|.+++|+|++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~---~~~~~v~~~~~s~~g~ 328 (368)
T 3mmy_A 253 DNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTL-ATVGSDGRFSFWDKDARTKLKTSE---QLDQPISACCFNHNGN 328 (368)
T ss_dssp HSEEEECSEEC----CCCEEECCEEEEEECTTTCCE-EEEETTSCEEEEETTTTEEEEECC---CCSSCEEEEEECTTSS
T ss_pred cceeeeeeecccccccccccccceEEEEEecCCCEE-EEEccCCeEEEEECCCCcEEEEec---CCCCCceEEEECCCCC
Confidence 11122222 2 69999999999998 899999999999999987754432 2367899999999999
Q ss_pred eeeec--cceeEEEEeeC
Q psy14130 370 CDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 370 ~~~~~--~~~~~~~~l~~ 385 (494)
+++++ |+..+.|++..
T Consensus 329 ~l~~~s~d~~~~~~~~~~ 346 (368)
T 3mmy_A 329 IFAYASSYDWSKGHEFYN 346 (368)
T ss_dssp CEEEEECCCSTTCGGGCC
T ss_pred eEEEEecccccccccccC
Confidence 88875 55555555443
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-28 Score=232.92 Aligned_cols=214 Identities=10% Similarity=-0.010 Sum_probs=157.3
Q ss_pred cEEEEEcCCCCCCCCcccceEec-ccccccEEEEEEcC--CCCCEEEEEeCCCeEEEEECCCCeEEEEec-CCCCceEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDL-HGHKRRVGYIEWHP--TAENVVASAGFDYLIILWDVGKGEALTVID-CHPDVINCL 225 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~-~~h~~~V~~~~~~p--~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~h~~~v~~l 225 (494)
.+.+|++.++ +.+..+ .+|...|.+++|+| ++ .+|++|+.|++|++||+++++.+.... .|...|+++
T Consensus 105 ~~~~~~~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~ 176 (343)
T 3lrv_A 105 QITILDSKTN-------KVLREIEVDSANEIIYMYGHNEVNT-EYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSG 176 (343)
T ss_dssp EEEEEETTTC-------CEEEEEECCCSSCEEEEECCC---C-CEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEE
T ss_pred ceEEeecCCc-------ceeEEeecCCCCCEEEEEcCCCCCC-CEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEE
Confidence 3455565555 323333 36778999999999 87 799999999999999999998877664 456689999
Q ss_pred EEcCCCCEEEEEeCCCeEEEEeCCCCceE-EEeee-cCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCcee
Q psy14130 226 SFNRDGSRLVTTCKDKTVRVLDPRTGLVI-SQGVC-HPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLA 303 (494)
Q Consensus 226 ~~~~~~~~l~s~~~d~~v~iwd~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~ 303 (494)
+|+|+|.+|++|+.|+.|++||+++++.+ ..+.. |... +..+.|+|++ .++++| + ++.|++||+++......
T Consensus 177 ~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~-v~~l~fs~~g-~~l~s~---~-~~~v~iwd~~~~~~~~~ 250 (343)
T 3lrv_A 177 VLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAK-IKEVKFADNG-YWMVVE---C-DQTVVCFDLRKDVGTLA 250 (343)
T ss_dssp EECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSC-EEEEEECTTS-SEEEEE---E-SSBEEEEETTSSTTCBS
T ss_pred EECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCC-EEEEEEeCCC-CEEEEE---e-CCeEEEEEcCCCCccee
Confidence 99999999999999999999999999977 78887 8877 9999999984 555555 3 55999999998665433
Q ss_pred Eeeec-CCCce--EEeEEeCCCCEEEEEEeC-CCcEEEEEeeCCCceEEecccccCCCCeeEEEEec---CCceeee--c
Q psy14130 304 LETVD-SSSGV--LFPYYDHDTRILFLAGKG-DGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMP---KRGCDVT--Q 374 (494)
Q Consensus 304 ~~~~~-~~~~v--~~~~~~~~~~~l~~~g~~-dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p---~~~~~~~--~ 374 (494)
+..+. +...+ .+++|+|++++| ++++. |+.|++|++......... .++..++|.| +...+++ .
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~g~~l-~~~s~~d~~i~v~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~~~~ 322 (343)
T 3lrv_A 251 YPTYTIPEFKTGTVTYDIDDSGKNM-IAYSNESNSLTIYKFDKKTKNWTK-------DEESALCLQSDTADFTDMDVVCG 322 (343)
T ss_dssp SCCCBC-----CCEEEEECTTSSEE-EEEETTTTEEEEEEECTTTCSEEE-------EEEEECCC----CCCCEEEEEEE
T ss_pred ecccccccccccceEEEECCCCCEE-EEecCCCCcEEEEEEcccccceEe-------cCceeEecCccccccceeEEEec
Confidence 32211 11222 469999999999 66666 999999999776543222 4567778887 5554443 4
Q ss_pred cceeEEEEeeC
Q psy14130 375 CEIFRFFKLHT 385 (494)
Q Consensus 375 ~~~~~~~~l~~ 385 (494)
++.++++-...
T Consensus 323 d~~~~~~~~~~ 333 (343)
T 3lrv_A 323 DGGIAAILKTN 333 (343)
T ss_dssp TTEEEEEEECS
T ss_pred CCceEEEEecC
Confidence 77777765443
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.3e-28 Score=233.77 Aligned_cols=184 Identities=17% Similarity=0.139 Sum_probs=147.6
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccc----cEEEEE----EcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCC
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKR----RVGYIE----WHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPD 220 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~----~V~~~~----~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~ 220 (494)
+.|++||+.++. .+...+..|.. .|.+++ |+|++ .+|++++.|+.|++||+++++.... ..|..
T Consensus 139 ~~i~vwd~~~~~------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~ 210 (357)
T 3i2n_A 139 GTVKVWDPRQKD------DPVANMEPVQGENKRDCWTVAFGNAYNQEE-RVVCAGYDNGDIKLFDLRNMALRWE-TNIKN 210 (357)
T ss_dssp SCEEEECTTSCS------SCSEEECCCTTSCCCCEEEEEEECCCC-CC-CEEEEEETTSEEEEEETTTTEEEEE-EECSS
T ss_pred CeEEEEeCCCCC------CcceeccccCCCCCCceEEEEEEeccCCCC-CEEEEEccCCeEEEEECccCceeee-cCCCC
Confidence 379999998873 14455544444 899998 78887 7999999999999999999887554 45899
Q ss_pred ceEEEEEcC---CCCEEEEEeCCCeEEEEeCCCCceEEEee-----ecCCCCceEEEEECCCCeEEEEEecCCCCceEEE
Q psy14130 221 VINCLSFNR---DGSRLVTTCKDKTVRVLDPRTGLVISQGV-----CHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGL 292 (494)
Q Consensus 221 ~v~~l~~~~---~~~~l~s~~~d~~v~iwd~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~i 292 (494)
.|.+++|+| ++.+|++++.|+.|++||+++++.+..+. .|... +..+.|+|++..++++| +.|+.|++
T Consensus 211 ~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~---~~dg~i~i 286 (357)
T 3i2n_A 211 GVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKST-VWQVRHLPQNRELFLTA---GGAGGLHL 286 (357)
T ss_dssp CEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSC-EEEEEEETTEEEEEEEE---ETTSEEEE
T ss_pred ceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCC-EEEEEECCCCCcEEEEE---eCCCcEEE
Confidence 999999999 99999999999999999999877554443 78877 99999999966577777 69999999
Q ss_pred EeCCCCCCc-----------------eeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCC
Q psy14130 293 WDENDLNTP-----------------LALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNER 344 (494)
Q Consensus 293 wd~~~~~~~-----------------~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~ 344 (494)
||++..... .......+...|.+++|+|++++|+++|+.||.|++||+.+.+
T Consensus 287 wd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 287 WKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp EEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred eecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence 998864433 1122234667899999999999995589999999999998754
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-28 Score=245.90 Aligned_cols=226 Identities=10% Similarity=0.045 Sum_probs=177.0
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCC-----CCEEEEEeCCCeEEEEECCCCeE-----------
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTA-----ENVVASAGFDYLIILWDVGKGEA----------- 211 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~-----~~~l~s~s~d~~v~iwd~~~~~~----------- 211 (494)
+++|+||++.++.... .....+.+|.+.|.+++|+|++ ..+||+|+.||+|++||+.++..
T Consensus 182 D~tI~iWd~~~~~~~~---~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p 258 (524)
T 2j04_B 182 SSCIQIFKMNTSTLHC---VKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKP 258 (524)
T ss_dssp CEEEEEEEEETTTCCE---EEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSC
T ss_pred CceEEEEEccCCCCCc---eEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCc
Confidence 4579999998764210 1124466788999999999971 26999999999999999976632
Q ss_pred EEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc-eEEEeeecCCCCceEE--EEECCCCeEEEEEecCCCCc
Q psy14130 212 LTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGL-VISQGVCHPGTRSSKA--VFIGDTGRIVTTGFSRHSDR 288 (494)
Q Consensus 212 ~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~l~~~g~~~~~d~ 288 (494)
...+.+|...|++++|++++ .|++|+.||+|++||++++. +...+.+|... +.++ .|.+++..++++| +.|+
T Consensus 259 ~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~-V~sv~~~~s~~g~~~laS~---S~D~ 333 (524)
T 2j04_B 259 SLTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSY-ILSVSTAYSDFEDTVVSTV---AVDG 333 (524)
T ss_dssp SEEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEECSSSC-EEEEEEECCTTSCCEEEEE---ETTS
T ss_pred eEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEeeccccc-EEEEEEEcCCCCCeEEEEe---ccCC
Confidence 34678899999999999864 89999999999999999774 45668889887 8888 3455533777777 7999
Q ss_pred eEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCC
Q psy14130 289 QVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKR 368 (494)
Q Consensus 289 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~ 368 (494)
+|+|||+++......+........+.+++|+|+++.+ ++++.|++|++||++++.....+. .+..+|.+++|+|++
T Consensus 334 tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l-~s~~~d~tv~lwd~~~~~~~~~l~---gH~~~V~sva~Sp~g 409 (524)
T 2j04_B 334 YFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSY-IYSDGASSLRAVPSRAAFAVHPLV---SRETTITAIGVSRLH 409 (524)
T ss_dssp EEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEE-EEECSSSEEEEEETTCTTCCEEEE---ECSSCEEEEECCSSC
T ss_pred eEEEEECCCCCcccccccccccCcccceEeCCCcCeE-EEeCCCCcEEEEECcccccceeee---cCCCceEEEEeCCCC
Confidence 9999999875543333322222347889999999987 889999999999999987654433 246789999999999
Q ss_pred ceeeec--cceeEEEEeeC
Q psy14130 369 GCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 369 ~~~~~~--~~~~~~~~l~~ 385 (494)
..++++ |+.+++|++..
T Consensus 410 ~~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 410 PMVLAGSADGSLIITNAAR 428 (524)
T ss_dssp CBCEEEETTTEEECCBSCS
T ss_pred CeEEEEECCCEEEEEechH
Confidence 988875 99999999755
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-27 Score=229.67 Aligned_cols=214 Identities=11% Similarity=0.055 Sum_probs=158.6
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC-eEEEEecCCCCceEEEEEc
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKG-EALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~-~~~~~~~~h~~~v~~l~~~ 228 (494)
+|+|||+.++ +.+..+. |...|.+++|+++. ++.+. |+.|++||+.++ +.+..+.. ....++++
T Consensus 82 ~v~iWd~~~~-------~~~~~~~-~~~~v~~v~~~~~~---~~~~~-~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s 146 (355)
T 3vu4_A 82 VVHIWDDVKK-------QDVSRIK-VDAPVKDLFLSREF---IVVSY-GDVISVFKFGNPWKRITDDIR---FGGVCEFS 146 (355)
T ss_dssp EEEEEETTTT-------EEEEEEE-CSSCEEEEEECSSE---EEEEE-TTEEEEEESSTTCCBSSCCEE---EEEEEEEE
T ss_pred EEEEEECCCC-------cEEEEEE-CCCceEEEEEcCCE---EEEEE-cCEEEEEECCCCceeeEEecc---CCceEEEE
Confidence 7999999988 5666665 67799999999863 33343 789999999988 66555553 44456677
Q ss_pred CCCCEEEE--EeCCCeEEEEeCCCCc----------------eEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCce-
Q psy14130 229 RDGSRLVT--TCKDKTVRVLDPRTGL----------------VISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQ- 289 (494)
Q Consensus 229 ~~~~~l~s--~~~d~~v~iwd~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~- 289 (494)
+ .+++. |+.||.|++||+++++ .+..+.+|... +.+++|+|+ +.++++| +.|++
T Consensus 147 ~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~-v~~~~~s~~-g~~l~s~---s~d~~~ 219 (355)
T 3vu4_A 147 N--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNP-IKMVRLNRK-SDMVATC---SQDGTI 219 (355)
T ss_dssp T--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSC-EEEEEECTT-SSEEEEE---ETTCSE
T ss_pred c--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCc-eEEEEECCC-CCEEEEE---eCCCCE
Confidence 6 56666 5789999999999865 26788899988 999999998 5566666 59998
Q ss_pred EEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCce-EEeccc----------------
Q psy14130 290 VGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPY-IHFLNQ---------------- 352 (494)
Q Consensus 290 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~-~~~~~~---------------- 352 (494)
|++||+++......+....|...|.+++|+|++++| ++|+.|+.|++||++.+... ...+..
T Consensus 220 v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l-~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (355)
T 3vu4_A 220 IRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKL-AVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNF 298 (355)
T ss_dssp EEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEE-EEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEE
T ss_pred EEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEE-EEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEE
Confidence 999999986543333211267889999999999998 89999999999999865321 011100
Q ss_pred ---ccCCCCeeEEEEecCCceeeec--cceeEEEEeeCC
Q psy14130 353 ---SLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHTT 386 (494)
Q Consensus 353 ---~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~~ 386 (494)
.....+...++|+|++..++.+ |+.+++|++...
T Consensus 299 ~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~ 337 (355)
T 3vu4_A 299 KLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFD 337 (355)
T ss_dssp ECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEE
T ss_pred EeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcC
Confidence 0011234679999999887775 899999998763
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-27 Score=236.60 Aligned_cols=224 Identities=9% Similarity=-0.001 Sum_probs=172.6
Q ss_pred cCcEEEEEcC--CCCCCCCcccceEecc--cccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEE----EecCCC
Q psy14130 148 IHRVKLWYIP--DGGLSGNLNEWIMDLH--GHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALT----VIDCHP 219 (494)
Q Consensus 148 ~~~v~iw~~~--~~~~~~~~~~~~~~~~--~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~----~~~~h~ 219 (494)
++.|+|||+. ++ ..+..+. .|...|.+++|+|++ .+|++|+.|+.|++|++.+++... .+.+|.
T Consensus 124 dg~v~iwd~~~~~~-------~~~~~~~~~~~~~~v~~~~~sp~~-~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~ 195 (450)
T 2vdu_B 124 DKSLLVFDVDKTSK-------NVLKLRKRFCFSKRPNAISIAEDD-TTVIIADKFGDVYSIDINSIPEEKFTQEPILGHV 195 (450)
T ss_dssp GTEEEEEEECSSSS-------SCEEEEEEEECSSCEEEEEECTTS-SEEEEEETTSEEEEEETTSCCCSSCCCCCSEECS
T ss_pred CCeEEEEECcCCCC-------ceeeeeecccCCCCceEEEEcCCC-CEEEEEeCCCcEEEEecCCcccccccceeeeccc
Confidence 3579999998 66 4455554 577899999999998 799999999999999998876543 677899
Q ss_pred CceEEEEEcCC---CCEEEEEeCCCeEEEEeCCCCceEEE-eeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeC
Q psy14130 220 DVINCLSFNRD---GSRLVTTCKDKTVRVLDPRTGLVISQ-GVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDE 295 (494)
Q Consensus 220 ~~v~~l~~~~~---~~~l~s~~~d~~v~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~ 295 (494)
..|++++|+|+ +++|++++.|+.|++||+++++.+.. +.+|... +..++|+ + +.++++| +.|+.|++||+
T Consensus 196 ~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~-v~~~~~s-d-~~~l~s~---~~d~~v~vwd~ 269 (450)
T 2vdu_B 196 SMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHF-VSSICCG-K-DYLLLSA---GGDDKIFAWDW 269 (450)
T ss_dssp SCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSC-EEEEEEC-S-TTEEEEE---ESSSEEEEEET
T ss_pred CceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCc-eEEEEEC-C-CCEEEEE---eCCCeEEEEEC
Confidence 99999999999 99999999999999999999998877 5578877 9999999 6 5555555 58999999999
Q ss_pred CCCCCceeEeee-----------------------cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEe--eCCCceEEec
Q psy14130 296 NDLNTPLALETV-----------------------DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYEL--TNERPYIHFL 350 (494)
Q Consensus 296 ~~~~~~~~~~~~-----------------------~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~--~~~~~~~~~~ 350 (494)
++......+... .....+..++|+|++++|++++..|+.|++|++ ..+.. ...+
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~-l~~~ 348 (450)
T 2vdu_B 270 KTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGD-LALK 348 (450)
T ss_dssp TTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTC-EEEE
T ss_pred CCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCc-eeec
Confidence 986543333211 123468899999999999444448999999999 55422 1222
Q ss_pred ccccCCCCeeEEEEecCCceeeec--------cceeEEEEeeCC
Q psy14130 351 NQSLSGAPQRGLGFMPKRGCDVTQ--------CEIFRFFKLHTT 386 (494)
Q Consensus 351 ~~~~~~~~v~~~~~~p~~~~~~~~--------~~~~~~~~l~~~ 386 (494)
..+.....+.+++|+|++.+++.+ +..+++|.+...
T Consensus 349 ~~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 349 QIITFPYNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp EEEECSSCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred cEeccCCceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcC
Confidence 233334789999999975544443 234799998763
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-28 Score=237.49 Aligned_cols=179 Identities=17% Similarity=0.312 Sum_probs=146.1
Q ss_pred CcEEEEEcCCCCCCCCcccceEec---ccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEe----------
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDL---HGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVI---------- 215 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~---~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~---------- 215 (494)
+.|++||+.++ +.+..+ .+|...|.+++|+|++ .+|++++.|+.|++||+++++.+..+
T Consensus 138 g~i~iwd~~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 209 (366)
T 3k26_A 138 HALRLWNIQTD-------TLVAIFGGVEGHRDEVLSADYDLLG-EKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNK 209 (366)
T ss_dssp SCEEEEETTTT-------EEEEEECSTTSCSSCEEEEEECTTS-SEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGG
T ss_pred CeEEEEEeecC-------eEEEEecccccccCceeEEEECCCC-CEEEEecCCCCEEEEECCCCccccccceeEEecCCC
Confidence 47999999987 555555 7899999999999998 79999999999999999876544333
Q ss_pred ------------------cCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce--------------EEEeeecCCC
Q psy14130 216 ------------------DCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLV--------------ISQGVCHPGT 263 (494)
Q Consensus 216 ------------------~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~--------------~~~~~~~~~~ 263 (494)
.+|...|.+++|+ +++|++++.|+.|++||+++++. +..+..|...
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (366)
T 3k26_A 210 TNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCD 287 (366)
T ss_dssp CSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCC
T ss_pred CcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCc
Confidence 3499999999998 77999999999999999988744 7778888877
Q ss_pred CceEEEEECCC-CeEEEEEecCCCCceEEEEeCCCCCCce-eEeee-cC--CCceEEeEEeCCCCEEEEEEeCCCcEEEE
Q psy14130 264 RSSKAVFIGDT-GRIVTTGFSRHSDRQVGLWDENDLNTPL-ALETV-DS--SSGVLFPYYDHDTRILFLAGKGDGNIRYY 338 (494)
Q Consensus 264 ~~~~~~~~~~~-~~l~~~g~~~~~d~~i~iwd~~~~~~~~-~~~~~-~~--~~~v~~~~~~~~~~~l~~~g~~dg~i~~w 338 (494)
+..+.|+|+. +.++++| +.|+.|++||+++..... ....+ .+ ...|.+++|+|++++| ++|+.||.|++|
T Consensus 288 -v~~~~~s~~~~~~~l~~~---~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~s~~~dg~i~iw 362 (366)
T 3k26_A 288 -IWYMRFSMDFWQKMLALG---NQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSIL-IAVCDDASIWRW 362 (366)
T ss_dssp -SSCCCCEECTTSSEEEEE---CTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEE-EEEETTSEEEEE
T ss_pred -EEEEEEcCCCCCcEEEEE---ecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeE-EEEeCCCEEEEE
Confidence 8899999882 4566666 699999999998765322 11122 22 5889999999999998 899999999999
Q ss_pred EeeC
Q psy14130 339 ELTN 342 (494)
Q Consensus 339 d~~~ 342 (494)
|+.+
T Consensus 363 d~~~ 366 (366)
T 3k26_A 363 DRLR 366 (366)
T ss_dssp EC--
T ss_pred EecC
Confidence 9853
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-28 Score=238.76 Aligned_cols=225 Identities=12% Similarity=0.081 Sum_probs=171.8
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe---EEEEecCCCCceEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE---ALTVIDCHPDVINCL 225 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~---~~~~~~~h~~~v~~l 225 (494)
+.|+|||+.++.. .....+.+|...|.+++|+|++ ++|++++.|++|++||+.+++ ....+.+|...|.++
T Consensus 33 ~~i~iw~~~~~~~-----~~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~ 106 (377)
T 3dwl_C 33 NQVELYEQDGNGW-----KHARTFSDHDKIVTCVDWAPKS-NRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFV 106 (377)
T ss_dssp SCBCEEEEETTEE-----EECCCBCCCSSCEEEEEECTTT-CCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEE
T ss_pred CEEEEEEccCCce-----EEEEEEecCCceEEEEEEeCCC-CEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEE
Confidence 3799999987621 3455778999999999999998 799999999999999999877 677788899999999
Q ss_pred EEcCCCCEEEEEeCCCeEEEEeCCCCc---eEEEeee-cCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCC-
Q psy14130 226 SFNRDGSRLVTTCKDKTVRVLDPRTGL---VISQGVC-HPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNT- 300 (494)
Q Consensus 226 ~~~~~~~~l~s~~~d~~v~iwd~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~- 300 (494)
+|+|++++|++++.|+.|++||+++++ ....+.. |... +..++|+|++ .++++| +.|+.|++||++....
T Consensus 107 ~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~-v~~~~~~~~~-~~l~~~---~~d~~i~iwd~~~~~~~ 181 (377)
T 3dwl_C 107 RWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRST-ILSLDWHPNN-VLLAAG---CADRKAYVLSAYVRDVD 181 (377)
T ss_dssp ECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSC-EEEEEECTTS-SEEEEE---ESSSCEEEEEECCSSCC
T ss_pred EECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCC-eEEEEEcCCC-CEEEEE---eCCCEEEEEEEEecccC
Confidence 999999999999999999999999887 4677777 7777 9999999985 555555 5899999999863220
Q ss_pred --------------ceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEeccc-ccCCCCeeEEEEe
Q psy14130 301 --------------PLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQ-SLSGAPQRGLGFM 365 (494)
Q Consensus 301 --------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~-~~~~~~v~~~~~~ 365 (494)
......+.+...|.+++|+|++++| ++|+.||.|++||+.+++.....+.. ..+..+|.+++|+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s 260 (377)
T 3dwl_C 182 AKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNAL-AYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWA 260 (377)
T ss_dssp -CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCE-EEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEE
T ss_pred CCccccccccccchhhhhhcccCCceEEEEEECCCCCEE-EEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEc
Confidence 1112222577889999999999998 89999999999999998763222222 2345789999999
Q ss_pred cCCceeeec-cceeEEEEeeC
Q psy14130 366 PKRGCDVTQ-CEIFRFFKLHT 385 (494)
Q Consensus 366 p~~~~~~~~-~~~~~~~~l~~ 385 (494)
|++.+++++ ++.+.+|....
T Consensus 261 ~~~~~l~~~~~~~~~~~~~~~ 281 (377)
T 3dwl_C 261 NESAIVAAGYNYSPILLQGNE 281 (377)
T ss_dssp ETTEEEEEESSSSEEEECCCC
T ss_pred CCCCEEEEEcCCcEEEEEeCC
Confidence 999988886 55556776654
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=99.96 E-value=9.8e-28 Score=234.96 Aligned_cols=236 Identities=16% Similarity=0.231 Sum_probs=186.9
Q ss_pred EcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcC-CCCCEEEEEeCCCeEEEEECCCC-------eEEEEecCC
Q psy14130 147 PIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHP-TAENVVASAGFDYLIILWDVGKG-------EALTVIDCH 218 (494)
Q Consensus 147 ~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p-~~~~~l~s~s~d~~v~iwd~~~~-------~~~~~~~~h 218 (494)
..+.|+||++...+.. ......+.+|...|.+++|+| ++ .+|++|+.||+|++||+.++ +++..+.+|
T Consensus 55 ~~g~i~v~~~~~~~~~---~~~~~~~~~h~~~V~~~~~~p~~~-~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h 130 (402)
T 2aq5_A 55 GGGAFLVLPLGKTGRV---DKNVPLVCGHTAPVLDIAWCPHND-NVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGH 130 (402)
T ss_dssp SSCCEEEEETTCCEEC---CTTCCCBCCCSSCEEEEEECTTCT-TEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECC
T ss_pred CCCEEEEEECccCCCC---CCCCceEecCCCCEEEEEeCCCCC-CEEEEEeCCCeEEEEEccCCCCccccCCceEEecCC
Confidence 3678999999664221 134456789999999999999 66 79999999999999999987 567889999
Q ss_pred CCceEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCceEEEe--eecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeC
Q psy14130 219 PDVINCLSFNRDG-SRLVTTCKDKTVRVLDPRTGLVISQG--VCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDE 295 (494)
Q Consensus 219 ~~~v~~l~~~~~~-~~l~s~~~d~~v~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~ 295 (494)
...|.+++|+|++ .+|++++.|+.|++||+++++.+..+ ..|... +..++|+|++..+++++ .|+.|++||+
T Consensus 131 ~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~----~d~~i~iwd~ 205 (402)
T 2aq5_A 131 TKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDT-IYSVDWSRDGALICTSC----RDKRVRVIEP 205 (402)
T ss_dssp SSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSC-EEEEEECTTSSCEEEEE----TTSEEEEEET
T ss_pred CCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCc-eEEEEECCCCCEEEEEe----cCCcEEEEeC
Confidence 9999999999998 69999999999999999999999888 778877 99999999855555554 8999999999
Q ss_pred CCCCCceeEeeecCCC-ceEEeEEeCCCCEEEEEE---eCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCcee
Q psy14130 296 NDLNTPLALETVDSSS-GVLFPYYDHDTRILFLAG---KGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCD 371 (494)
Q Consensus 296 ~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~g---~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~ 371 (494)
++......+. ..+.. .+..+.|+|++++| ++| +.|+.|++||+++++...... ...+...+.+++|+|++..+
T Consensus 206 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l-~~g~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l 282 (402)
T 2aq5_A 206 RKGTVVAEKD-RPHEGTRPVHAVFVSEGKIL-TTGFSRMSERQVALWDTKHLEEPLSLQ-ELDTSSGVLLPFFDPDTNIV 282 (402)
T ss_dssp TTTEEEEEEE-CSSCSSSCCEEEECSTTEEE-EEEECTTCCEEEEEEETTBCSSCSEEE-ECCCCSSCEEEEEETTTTEE
T ss_pred CCCceeeeec-cCCCCCcceEEEEcCCCcEE-EEeccCCCCceEEEEcCccccCCceEE-eccCCCceeEEEEcCCCCEE
Confidence 8754432221 23333 37889999999877 777 789999999999876422221 22345679999999999877
Q ss_pred e-e--ccceeEEEEeeCCCCeEEEeE
Q psy14130 372 V-T--QCEIFRFFKLHTTRNMCEPIS 394 (494)
Q Consensus 372 ~-~--~~~~~~~~~l~~~~~~~~~~~ 394 (494)
+ + .|+.+++|++...+..+..+.
T Consensus 283 ~~~g~~dg~i~i~d~~~~~~~~~~l~ 308 (402)
T 2aq5_A 283 YLCGKGDSSIRYFEITSEAPFLHYLS 308 (402)
T ss_dssp EEEETTCSCEEEEEECSSTTCEEEEE
T ss_pred EEEEcCCCeEEEEEecCCCcceEeec
Confidence 4 3 389999999988442244433
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-28 Score=231.90 Aligned_cols=209 Identities=12% Similarity=0.118 Sum_probs=163.0
Q ss_pred ecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe--EEEEecCCCCceEEEEEcC--CCCEEEEEeCCCeEEEE
Q psy14130 171 DLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE--ALTVIDCHPDVINCLSFNR--DGSRLVTTCKDKTVRVL 246 (494)
Q Consensus 171 ~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~--~~~~~~~h~~~v~~l~~~~--~~~~l~s~~~d~~v~iw 246 (494)
.+.+|.+.|++++|+|++ ++||+|+.|++|++||+.+++ .+..+.+|.+.|++++|++ ++++|++|+.|++|++|
T Consensus 8 ~~~~H~~~V~~v~~s~~g-~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iW 86 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYG-TRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIW 86 (316)
T ss_dssp ------CCEEEEEECGGG-CEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEE
T ss_pred ecccccCeEEEeeEcCCC-CEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEE
Confidence 456899999999999998 799999999999999998875 4678899999999999986 48999999999999999
Q ss_pred eCCCCc--eEEEeeecCCCCceEEEEECCC-CeEEEEEecCCCCceEEEEeCCCCCCcee-EeeecCCCceEEeEEeCCC
Q psy14130 247 DPRTGL--VISQGVCHPGTRSSKAVFIGDT-GRIVTTGFSRHSDRQVGLWDENDLNTPLA-LETVDSSSGVLFPYYDHDT 322 (494)
Q Consensus 247 d~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~l~~~g~~~~~d~~i~iwd~~~~~~~~~-~~~~~~~~~v~~~~~~~~~ 322 (494)
|+++++ .+..+.+|... +.+++|+|+. +.++++| +.|+.|++||++....... .....|...+.++.|+|+.
T Consensus 87 d~~~~~~~~~~~~~~h~~~-V~~v~~~p~~~g~~lasg---s~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 162 (316)
T 3bg1_A 87 REENGTWEKSHEHAGHDSS-VNSVCWAPHDYGLILACG---SSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAV 162 (316)
T ss_dssp CCSSSCCCEEEEECCCSSC-CCEEEECCTTTCSCEEEE---CSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCC
T ss_pred ECCCCcceEEEEccCCCCc-eEEEEECCCCCCcEEEEE---cCCCCEEEEecCCCCCcceeeeeccccCCcceEEEcccc
Confidence 999874 56777889887 9999999973 5677788 7999999999986432111 1112455778899999983
Q ss_pred -----------------CEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCC----ceeeec--cceeE
Q psy14130 323 -----------------RILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKR----GCDVTQ--CEIFR 379 (494)
Q Consensus 323 -----------------~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~----~~~~~~--~~~~~ 379 (494)
++| ++|+.|+.|++||++.+........-..+...|++++|+|++ ..++++ |+.++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~l-~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~ 241 (316)
T 3bg1_A 163 VPGSLIDHPSGQKPNYIKRF-ASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVF 241 (316)
T ss_dssp CC------CCSCCCCCCCBE-ECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEE
T ss_pred CCccccccccccCccccceE-EEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEE
Confidence 556 999999999999997653211111112346789999999986 556654 99999
Q ss_pred EEEeeC
Q psy14130 380 FFKLHT 385 (494)
Q Consensus 380 ~~~l~~ 385 (494)
+|++..
T Consensus 242 iw~~~~ 247 (316)
T 3bg1_A 242 IWTCDD 247 (316)
T ss_dssp EEECSS
T ss_pred EEEccC
Confidence 999875
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=99.96 E-value=4.6e-27 Score=227.21 Aligned_cols=222 Identities=10% Similarity=0.103 Sum_probs=179.9
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEE--ecCCCCceEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTV--IDCHPDVINCLS 226 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~--~~~h~~~v~~l~ 226 (494)
+.|++||+.++.. ..+..+.+|...|.+++|+|++ .+|++++.|+.|++||+.+++.... +..|...|.+++
T Consensus 30 ~~v~i~~~~~~~~-----~~~~~~~~h~~~v~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~ 103 (372)
T 1k8k_C 30 HEVHIYEKSGNKW-----VQVHELKEHNGQVTGVDWAPDS-NRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVR 103 (372)
T ss_dssp SEEEEEEEETTEE-----EEEEEEECCSSCEEEEEEETTT-TEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEE
T ss_pred CEEEEEeCCCCcE-----EeeeeecCCCCcccEEEEeCCC-CEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEE
Confidence 4799999987721 2677888999999999999998 7999999999999999988875444 467999999999
Q ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCce---EEEe-eecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCC---
Q psy14130 227 FNRDGSRLVTTCKDKTVRVLDPRTGLV---ISQG-VCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLN--- 299 (494)
Q Consensus 227 ~~~~~~~l~s~~~d~~v~iwd~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~--- 299 (494)
|+|++++|++++.|+.|++||++.++. ...+ ..|... +..+.|+|++ .++++| +.|+.|++||++...
T Consensus 104 ~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~-~~l~~~---~~dg~i~~~d~~~~~~~~ 178 (372)
T 1k8k_C 104 WAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRST-VLSLDWHPNS-VLLAAG---SCDFKCRIFSAYIKEVEE 178 (372)
T ss_dssp ECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSC-EEEEEECTTS-SEEEEE---ETTSCEEEEECCCTTTSC
T ss_pred ECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCC-eeEEEEcCCC-CEEEEE---cCCCCEEEEEcccccccc
Confidence 999999999999999999999998772 3333 456665 9999999985 455555 489999999975210
Q ss_pred ------------CceeEeee-cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEec
Q psy14130 300 ------------TPLALETV-DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMP 366 (494)
Q Consensus 300 ------------~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p 366 (494)
.......+ .+...+.+++|+|++++| ++++.||.|++||+++++.+..+. .+..++.+++|+|
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~---~~~~~v~~~~~~~ 254 (372)
T 1k8k_C 179 RPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRV-AWVSHDSTVCLADADKKMAVATLA---SETLPLLAVTFIT 254 (372)
T ss_dssp CCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEE-EEEETTTEEEEEEGGGTTEEEEEE---CSSCCEEEEEEEE
T ss_pred cccccccccccchhhheEecCCCCCeEEEEEECCCCCEE-EEEeCCCEEEEEECCCCceeEEEc---cCCCCeEEEEEec
Confidence 11112222 466789999999999988 889999999999999998755443 2356899999999
Q ss_pred CCceeeec-cceeEEEEeeC
Q psy14130 367 KRGCDVTQ-CEIFRFFKLHT 385 (494)
Q Consensus 367 ~~~~~~~~-~~~~~~~~l~~ 385 (494)
++.+++++ ++.+++|++..
T Consensus 255 ~~~~l~~~~d~~i~i~~~~~ 274 (372)
T 1k8k_C 255 ESSLVAAGHDCFPVLFTYDS 274 (372)
T ss_dssp TTEEEEEETTSSCEEEEEET
T ss_pred CCCEEEEEeCCeEEEEEccC
Confidence 99988775 89999999987
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=7.3e-27 Score=225.24 Aligned_cols=186 Identities=17% Similarity=0.157 Sum_probs=154.0
Q ss_pred CcEEEEEcCCCCCCCCcc----cceEecccccc--cEEEEEEcCCCCCEEEEEeCCCeEEEEECCC-CeEEEEecCCCCc
Q psy14130 149 HRVKLWYIPDGGLSGNLN----EWIMDLHGHKR--RVGYIEWHPTAENVVASAGFDYLIILWDVGK-GEALTVIDCHPDV 221 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~----~~~~~~~~h~~--~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~-~~~~~~~~~h~~~ 221 (494)
+.|++||+........+. .....+..|.. .+.+++|+|++ .+|++++.|+.|++||+.+ ++.+..+..|...
T Consensus 142 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 220 (369)
T 3zwl_B 142 GSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKG-KYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKS 220 (369)
T ss_dssp CEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGG-CEEEEEETTSEEEEEETTTTTEEEEEEECCSSC
T ss_pred CEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCC-CEEEEEcCCCEEEEEECCCCcEeEEEEecCCCc
Confidence 369999998765432211 23455666776 99999999998 7999999999999999998 7888999999999
Q ss_pred eEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCc-------------
Q psy14130 222 INCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDR------------- 288 (494)
Q Consensus 222 v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~------------- 288 (494)
|.+++|+|++++|++++.|+.|++||+++++.+..+. +... +..+.|+|++..+++++ .++
T Consensus 221 v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~-~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~~ 294 (369)
T 3zwl_B 221 ISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-TDCP-LNTAVITPLKEFIILGG----GQEAKDVTTTSANEGK 294 (369)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSC-EEEEEECSSSSEEEEEE----CCC-------------
T ss_pred eeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec-CCCC-ceeEEecCCCceEEEee----cCCCceEEEEecCCCc
Confidence 9999999999999999999999999999999888887 4444 88999999966665555 555
Q ss_pred -eEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCC
Q psy14130 289 -QVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNER 344 (494)
Q Consensus 289 -~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~ 344 (494)
.+++||+.+......+ ..+...|.+++|+|++++| ++|+.||.|++|++..+.
T Consensus 295 ~~i~~~d~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l-~s~~~dg~v~iw~~~~~~ 348 (369)
T 3zwl_B 295 FEARFYHKIFEEEIGRV--QGHFGPLNTVAISPQGTSY-ASGGEDGFIRLHHFEKSY 348 (369)
T ss_dssp CEEEEEETTTCCEEEEE--ECCSSCEEEEEECTTSSEE-EEEETTSEEEEEEECHHH
T ss_pred ceeEEEecCCCcchhhe--ecccCcEEEEEECCCCCEE-EEEcCCCeEEEEECcccc
Confidence 8999999876543332 3467889999999999998 899999999999998764
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-27 Score=232.84 Aligned_cols=216 Identities=18% Similarity=0.201 Sum_probs=143.2
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe-EEEEe------------
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE-ALTVI------------ 215 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~-~~~~~------------ 215 (494)
+.|++||+.++ ..+..+.+|...|.+++|+|++..+|++|+.||.|++||++++. .+..+
T Consensus 166 ~~v~~~d~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 238 (408)
T 4a11_B 166 PKVQLCDLKSG-------SCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVE 238 (408)
T ss_dssp SSEEEEESSSS-------CCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTT
T ss_pred CeEEEEeCCCc-------ceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeec
Confidence 37999999887 56678889999999999999986589999999999999998765 44444
Q ss_pred ---cCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCC----CCceEEEEECCCCeEEEEEecCCCCc
Q psy14130 216 ---DCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPG----TRSSKAVFIGDTGRIVTTGFSRHSDR 288 (494)
Q Consensus 216 ---~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~g~~~~~d~ 288 (494)
..|...|.+++|+|++++|++++.|+.|++||+++++.......+.. ..............+++++ .++
T Consensus 239 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 314 (408)
T 4a11_B 239 SANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVP----YGS 314 (408)
T ss_dssp TSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEE----ETT
T ss_pred cccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEe----cCC
Confidence 56889999999999999999999999999999999886544433211 1122222233335566665 799
Q ss_pred eEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCC
Q psy14130 289 QVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKR 368 (494)
Q Consensus 289 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~ 368 (494)
.|++||+.+......+ ..|...|.+++|+|++++| ++|+.||.|++||+.+++++...... .....+.|..
T Consensus 315 ~i~v~d~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l-~s~~~dg~i~iw~~~~~~~~~~~~~~------~~~~~~~~~~ 385 (408)
T 4a11_B 315 TIAVYTVYSGEQITML--KGHYKTVDCCVFQSNFQEL-YSGSRDCNILAWVPSLYEPVPDDDET------TTKSQLNPAF 385 (408)
T ss_dssp EEEEEETTTCCEEEEE--CCCSSCEEEEEEETTTTEE-EEEETTSCEEEEEECC--------------------------
T ss_pred EEEEEECcCCcceeee--ccCCCeEEEEEEcCCCCEE-EEECCCCeEEEEeCCCCCccCCCCce------Eecccccccc
Confidence 9999999876543322 2466889999999999998 89999999999999998764322111 1112233322
Q ss_pred ceeee---ccceeEEEEee
Q psy14130 369 GCDVT---QCEIFRFFKLH 384 (494)
Q Consensus 369 ~~~~~---~~~~~~~~~l~ 384 (494)
....+ .++.+++|...
T Consensus 386 ~~~~~~~~~~~~~~~W~~~ 404 (408)
T 4a11_B 386 EDAWSSSDEEGGTSAWSHP 404 (408)
T ss_dssp -------------------
T ss_pred ceeecccCccCceeecCCc
Confidence 22221 37788888754
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-28 Score=242.54 Aligned_cols=211 Identities=17% Similarity=0.178 Sum_probs=169.7
Q ss_pred eEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeE--EEEecCCCCceEEEEEcC-CCCEEEEEeCCCeEEE
Q psy14130 169 IMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEA--LTVIDCHPDVINCLSFNR-DGSRLVTTCKDKTVRV 245 (494)
Q Consensus 169 ~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~--~~~~~~h~~~v~~l~~~~-~~~~l~s~~~d~~v~i 245 (494)
.....+|...|+||+|||..+++||+|+.||+|+|||+.+++. ...+.+|.+.|++|+|+| ++.+|+||+.|++|++
T Consensus 112 ~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~i 191 (435)
T 4e54_B 112 LQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRL 191 (435)
T ss_dssp CCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEE
T ss_pred cccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEE
Confidence 3456679999999999997668999999999999999987653 445568999999999998 7899999999999999
Q ss_pred EeCCCCceEEEeeecCC-CCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCE
Q psy14130 246 LDPRTGLVISQGVCHPG-TRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRI 324 (494)
Q Consensus 246 wd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 324 (494)
||++++........+.. ..+..+.|+++ +.++++| +.|+.|++||++.. .... ...|...|.+++|+|+++.
T Consensus 192 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~g---~~dg~i~~wd~~~~-~~~~--~~~h~~~v~~v~~~p~~~~ 264 (435)
T 4e54_B 192 QDFKGNILRVFASSDTINIWFCSLDVSAS-SRMVVTG---DNVGNVILLNMDGK-ELWN--LRMHKKKVTHVALNPCCDW 264 (435)
T ss_dssp EETTSCEEEEEECCSSCSCCCCCEEEETT-TTEEEEE---CSSSBEEEEESSSC-BCCC--SBCCSSCEEEEEECTTCSS
T ss_pred eeccCCceeEEeccCCCCccEEEEEECCC-CCEEEEE---eCCCcEeeeccCcc-eeEE--EecccceEEeeeecCCCce
Confidence 99987654333333322 12577899998 5677777 69999999998753 2222 2246688999999999987
Q ss_pred EEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEeeCC
Q psy14130 325 LFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHTT 386 (494)
Q Consensus 325 l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~~ 386 (494)
++++|+.|+.|++||+++.+....+.....+..+|.+++|+|++.+++++ |+.+++|++...
T Consensus 265 ~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~ 328 (435)
T 4e54_B 265 FLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQW 328 (435)
T ss_dssp EEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSS
T ss_pred EEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCC
Confidence 77999999999999999877654444445567889999999999988875 899999999873
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-27 Score=236.40 Aligned_cols=177 Identities=14% Similarity=0.102 Sum_probs=146.2
Q ss_pred CcEEEEEcCCCCCCCCcccceEeccc--ccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEec-CCCCceEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHG--HKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVID-CHPDVINCL 225 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~--h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~h~~~v~~l 225 (494)
+.|++||+.++ +.+..+.+ |...|++++|+|++ .+|++|+.||.|++||+++++++..+. .|...|+++
T Consensus 192 ~~i~iwd~~~~-------~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~ 263 (437)
T 3gre_A 192 SRVIIFDIRTL-------ERLQIIENSPRHGAVSSICIDEEC-CVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHV 263 (437)
T ss_dssp SEEEEEETTTC-------CEEEEEECCGGGCCEEEEEECTTS-CEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEE
T ss_pred CeEEEEeCCCC-------eeeEEEccCCCCCceEEEEECCCC-CEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEE
Confidence 47999999988 66777877 89999999999998 799999999999999999999999886 788899999
Q ss_pred EEcC----CCCEEEEEeCCCeEEEEeCCCCceEEEeeecCC-------------------------CCceEEEEECCCCe
Q psy14130 226 SFNR----DGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPG-------------------------TRSSKAVFIGDTGR 276 (494)
Q Consensus 226 ~~~~----~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~ 276 (494)
+|+| ++.+|++++.|+.|++||+++++++..+.+|.. ..+..++|+ + +.
T Consensus 264 ~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~-~~ 341 (437)
T 3gre_A 264 EVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-N-DK 341 (437)
T ss_dssp EECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-T-TE
T ss_pred EeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-C-ce
Confidence 6665 677999999999999999999998888876531 126778888 4 47
Q ss_pred EEEEEecCCCCceEEEEeCCCCCCceeEeee-----------------------------------cCCCceEEeEEeCC
Q psy14130 277 IVTTGFSRHSDRQVGLWDENDLNTPLALETV-----------------------------------DSSSGVLFPYYDHD 321 (494)
Q Consensus 277 l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~-----------------------------------~~~~~v~~~~~~~~ 321 (494)
++++| +.|+.|++||+++......+... .|...|.+++|+++
T Consensus 342 ~l~s~---~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~ 418 (437)
T 3gre_A 342 ILLTD---EATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEV 418 (437)
T ss_dssp EEEEE---GGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEES
T ss_pred EEEec---CCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeecc
Confidence 77777 79999999999876544333211 16678999999998
Q ss_pred --CCEEEEEEeCCCcEEEEE
Q psy14130 322 --TRILFLAGKGDGNIRYYE 339 (494)
Q Consensus 322 --~~~l~~~g~~dg~i~~wd 339 (494)
+.+| ++|+.||.|++|.
T Consensus 419 ~~~~~l-~s~~~dG~I~iw~ 437 (437)
T 3gre_A 419 DETPLL-VACDNSGLIGIFQ 437 (437)
T ss_dssp SSSEEE-EEEETTSCEEEEC
T ss_pred CCceEE-EEEcCCceEEEeC
Confidence 4455 9999999999994
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.4e-27 Score=228.54 Aligned_cols=213 Identities=12% Similarity=0.167 Sum_probs=176.9
Q ss_pred ceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECC--CCeEEEEecCCCCceEEEEEcCC--CCEEEEEeCCCeE
Q psy14130 168 WIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVG--KGEALTVIDCHPDVINCLSFNRD--GSRLVTTCKDKTV 243 (494)
Q Consensus 168 ~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~--~~~~~~~~~~h~~~v~~l~~~~~--~~~l~s~~~d~~v 243 (494)
.+..+.+|...|++++|+|++ .+|++|+.|+.|++||+. +++.+..+.+|...|++++|+++ +++|++++.|+.|
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v 81 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDYYG-KRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 81 (379)
T ss_dssp --CCEEECCCCEEEEEECSSS-SEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred ccEEecCCcccEEEEEEcCCC-CEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEE
Confidence 456788999999999999998 799999999999999998 55677889999999999999987 9999999999999
Q ss_pred EEEeCCCCc--eEEEeeecCCCCceEEEEECCC-CeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeC
Q psy14130 244 RVLDPRTGL--VISQGVCHPGTRSSKAVFIGDT-GRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDH 320 (494)
Q Consensus 244 ~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~ 320 (494)
++||+++++ .+..+..|... +..+.|+|+. +.++++| +.|+.|++||+++...........+...+.+++|+|
T Consensus 82 ~iwd~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~l~~~---~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~ 157 (379)
T 3jrp_A 82 LIWKEENGRWSQIAVHAVHSAS-VNSVQWAPHEYGPLLLVA---SSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAP 157 (379)
T ss_dssp EEEEEETTEEEEEEEECCCSSC-EEEEEECCGGGCSEEEEE---ETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECC
T ss_pred EEEEcCCCceeEeeeecCCCcc-eEEEEeCCCCCCCEEEEe---cCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcC
Confidence 999999987 67777788877 9999999983 3444444 489999999999865544444456778899999999
Q ss_pred -------------CCCEEEEEEeCCCcEEEEEeeCCCceEEecccc-cCCCCeeEEEEecC---Cceeeec--cceeEEE
Q psy14130 321 -------------DTRILFLAGKGDGNIRYYELTNERPYIHFLNQS-LSGAPQRGLGFMPK---RGCDVTQ--CEIFRFF 381 (494)
Q Consensus 321 -------------~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~-~~~~~v~~~~~~p~---~~~~~~~--~~~~~~~ 381 (494)
++..+ ++|+.||.|++||+++++........+ .+..+|.+++|+|+ +.+++++ |+.+++|
T Consensus 158 ~~~~~~~~~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iw 236 (379)
T 3jrp_A 158 ATIEEDGEHNGTKESRKF-VTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIW 236 (379)
T ss_dssp CC----------CTTCEE-EEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEE
T ss_pred ccccccccccCCCCCCEE-EEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEE
Confidence 57777 899999999999999876543333222 24678999999999 7877775 8999999
Q ss_pred EeeCC
Q psy14130 382 KLHTT 386 (494)
Q Consensus 382 ~l~~~ 386 (494)
++...
T Consensus 237 d~~~~ 241 (379)
T 3jrp_A 237 TQDNE 241 (379)
T ss_dssp EESST
T ss_pred eCCCC
Confidence 99873
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=9.4e-27 Score=219.32 Aligned_cols=175 Identities=20% Similarity=0.340 Sum_probs=149.5
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcC-CCCCEEEEEeCCCeEEEEECCCCeEEEEecC-CCCceEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHP-TAENVVASAGFDYLIILWDVGKGEALTVIDC-HPDVINCLS 226 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p-~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~-h~~~v~~l~ 226 (494)
+.|++|| .+ .....+.+|...|.+++|+| ++ .++++++.|+.|++|| .++....+.. |...|.+++
T Consensus 124 ~~i~~~d--~~-------~~~~~~~~~~~~v~~~~~~~~~~-~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~ 191 (313)
T 3odt_A 124 KTAKVWK--EG-------SLVYNLQAHNASVWDAKVVSFSE-NKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLA 191 (313)
T ss_dssp SEEEEEE--TT-------EEEEEEECCSSCEEEEEEEETTT-TEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEE
T ss_pred CCEEEEc--CC-------cEEEecccCCCceeEEEEccCCC-CEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEE
Confidence 4799999 33 66678889999999999998 55 7999999999999999 5667777777 999999999
Q ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEee
Q psy14130 227 FNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALET 306 (494)
Q Consensus 227 ~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~ 306 (494)
|+|++. +++++.|+.|++||+++++.+..+..|... +..++|+|++ .+++++ .|+.|++||+++......+
T Consensus 192 ~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-i~~~~~~~~~-~l~~~~----~dg~v~iwd~~~~~~~~~~-- 262 (313)
T 3odt_A 192 VVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESF-VYCIKLLPNG-DIVSCG----EDRTVRIWSKENGSLKQVI-- 262 (313)
T ss_dssp EEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSC-EEEEEECTTS-CEEEEE----TTSEEEEECTTTCCEEEEE--
T ss_pred EcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCce-EEEEEEecCC-CEEEEe----cCCEEEEEECCCCceeEEE--
Confidence 999998 999999999999999999999999999887 9999999985 666555 8999999999886543333
Q ss_pred ecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCce
Q psy14130 307 VDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPY 346 (494)
Q Consensus 307 ~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~ 346 (494)
..+...+.+++|+|+++ + ++++.||.|++||+++++..
T Consensus 263 ~~~~~~i~~~~~~~~~~-~-~~~~~dg~i~iw~~~~~~~~ 300 (313)
T 3odt_A 263 TLPAISIWSVDCMSNGD-I-IVGSSDNLVRIFSQEKSRWA 300 (313)
T ss_dssp ECSSSCEEEEEECTTSC-E-EEEETTSCEEEEESCGGGCC
T ss_pred eccCceEEEEEEccCCC-E-EEEeCCCcEEEEeCCCCcee
Confidence 23556899999999998 4 56889999999999987653
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-26 Score=217.77 Aligned_cols=181 Identities=17% Similarity=0.270 Sum_probs=146.4
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe----EEEEecCCCCceEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE----ALTVIDCHPDVINCL 225 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~----~~~~~~~h~~~v~~l 225 (494)
.+++|+..... ..+..+.+|...+.++.|++++ .+|++++.|++|++||+++++ .......|.+.|.++
T Consensus 130 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~ 202 (318)
T 4ggc_A 130 HIHHHDVRVAE------HHVATLSGHSQEVCGLRWAPDG-RHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAV 202 (318)
T ss_dssp EEEEEETTSSS------CEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEE
T ss_pred ceEeeecCCCc------eeEEEEcCccCceEEEEEcCCC-CEEEEEecCcceeEEECCCCcccccceeeecccCCceEEE
Confidence 58889887653 4566788999999999999998 799999999999999998765 345566788999999
Q ss_pred EEcCCCCEE---EEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCce
Q psy14130 226 SFNRDGSRL---VTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPL 302 (494)
Q Consensus 226 ~~~~~~~~l---~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~ 302 (494)
+++|++..+ ++++.++.|++||.+.......... ... +..+.|.+++..+++++. +.|+.|++||+++.....
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~-~~~-v~~~~~~~~~~~~~~~sg--~~d~~i~iwd~~~~~~~~ 278 (318)
T 4ggc_A 203 AWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDA-HSQ-VCSILWSPHYKELISGHG--FAQNQLVIWKYPTMAKVA 278 (318)
T ss_dssp EECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEEC-SSC-EEEEEEETTTTEEEEEEC--TTTCCEEEEETTTCCEEE
T ss_pred EecCCCCcEEEEEecCCCCEEEEEecccccccccccc-eee-eeeeeecccccceEEEEE--cCCCEEEEEECCCCcEEE
Confidence 999976533 4567889999999998886666543 344 788999999877776541 579999999998865433
Q ss_pred eEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCC
Q psy14130 303 ALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNER 344 (494)
Q Consensus 303 ~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~ 344 (494)
.+ ..|...|.+++|+|++++| ++|+.||+|++||+....
T Consensus 279 ~l--~gH~~~V~~l~~spdg~~l-~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 279 EL--KGHTSRVLSLTMSPDGATV-ASAAADETLRLWRCFELD 317 (318)
T ss_dssp EE--CCCSSCEEEEEECTTSSCE-EEEETTTEEEEECCSCCC
T ss_pred EE--cCCCCCEEEEEEcCCCCEE-EEEecCCeEEEEECCCCC
Confidence 32 2467899999999999998 999999999999997654
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-27 Score=228.68 Aligned_cols=178 Identities=12% Similarity=0.056 Sum_probs=144.5
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEE--ecCCCCceEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTV--IDCHPDVINCLS 226 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~--~~~h~~~v~~l~ 226 (494)
+.|+|||+.++ +++..+. |...|.+++|+|+| ++|++++.| .+++|+..+++.+.. ...|...|.+++
T Consensus 157 ~~i~iwd~~~~-------~~~~~~~-~~~~V~~v~fspdg-~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~ 226 (365)
T 4h5i_A 157 AIMRIIDPSDL-------TEKFEIE-TRGEVKDLHFSTDG-KVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKIN 226 (365)
T ss_dssp CEEEEEETTTT-------EEEEEEE-CSSCCCEEEECTTS-SEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEE
T ss_pred CEEEEeECCCC-------cEEEEeC-CCCceEEEEEccCC-ceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEE
Confidence 36999999988 5666665 78889999999998 799999855 567777777765543 456889999999
Q ss_pred EcCCCCEEEEEeCCC----eEEEEeCCCCce----EEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCC
Q psy14130 227 FNRDGSRLVTTCKDK----TVRVLDPRTGLV----ISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDL 298 (494)
Q Consensus 227 ~~~~~~~l~s~~~d~----~v~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~ 298 (494)
|+|+++++++++.|+ .+++||+..+.. ...+..|... +.+++|+|+ +.+|++| +.|++|+|||++++
T Consensus 227 fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-V~~~~~Spd-g~~lasg---s~D~~V~iwd~~~~ 301 (365)
T 4h5i_A 227 FIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKG-ITSMDVDMK-GELAVLA---SNDNSIALVKLKDL 301 (365)
T ss_dssp EEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSC-EEEEEECTT-SCEEEEE---ETTSCEEEEETTTT
T ss_pred EcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCC-eEeEEECCC-CCceEEE---cCCCEEEEEECCCC
Confidence 999999999999887 689999887653 3456778777 999999998 5677777 69999999999875
Q ss_pred CCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCC
Q psy14130 299 NTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNE 343 (494)
Q Consensus 299 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~ 343 (494)
+.... ....|...|.+++|+|||++| ++|+.|++|+|||+...
T Consensus 302 ~~~~~-~~~gH~~~V~~v~fSpdg~~l-aS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 302 SMSKI-FKQAHSFAITEVTISPDSTYV-ASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEEEE-ETTSSSSCEEEEEECTTSCEE-EEEETTSEEEEEECCTT
T ss_pred cEEEE-ecCcccCCEEEEEECCCCCEE-EEEeCCCeEEEEEcCCC
Confidence 43222 122477899999999999999 99999999999999754
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=99.95 E-value=9.6e-27 Score=230.39 Aligned_cols=298 Identities=15% Similarity=0.216 Sum_probs=189.1
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 82 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~ 82 (494)
.+|..+|+|++| ++++|++|+.||+|+ +|+....+...... .... .-..+..++..+ .....+|.+.++
T Consensus 130 ~~~~~~v~~~~~---d~~~l~~g~~dg~i~-iwd~~~~~~~~~~~--~h~~--~v~~l~~~~~~l---~sg~~dg~i~vw 198 (435)
T 1p22_A 130 SETSKGVYCLQY---DDQKIVSGLRDNTIK-IWDKNTLECKRILT--GHTG--SVLCLQYDERVI---ITGSSDSTVRVW 198 (435)
T ss_dssp CSSCCCEEEEEC---CSSEEEEEESSSCEE-EEESSSCCEEEEEC--CCSS--CEEEEECCSSEE---EEEETTSCEEEE
T ss_pred cCCCCcEEEEEE---CCCEEEEEeCCCeEE-EEeCCCCeEEEEEc--CCCC--cEEEEEECCCEE---EEEcCCCeEEEE
Confidence 689999999999 456999999999999 88887665322110 0000 000011122211 122233444443
Q ss_pred eccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCC
Q psy14130 83 PIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLS 162 (494)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~ 162 (494)
.+... + ....+ ......+..+.+++..++.+ ..++.|++||+.++...
T Consensus 199 d~~~~------~-------------~~~~~--~~h~~~v~~l~~~~~~l~s~-----------s~dg~i~vwd~~~~~~~ 246 (435)
T 1p22_A 199 DVNTG------E-------------MLNTL--IHHCEAVLHLRFNNGMMVTC-----------SKDRSIAVWDMASPTDI 246 (435)
T ss_dssp ESSSC------C-------------EEEEE--CCCCSCEEEEECCTTEEEEE-----------ETTSCEEEEECSSSSCC
T ss_pred ECCCC------c-------------EEEEE--cCCCCcEEEEEEcCCEEEEe-----------eCCCcEEEEeCCCCCCc
Confidence 33211 0 00000 01112222333344322221 12247999999887332
Q ss_pred CCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCe
Q psy14130 163 GNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKT 242 (494)
Q Consensus 163 ~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~ 242 (494)
.....+.+|...|.+++| ++ ++|++|+.|+.|++||+++++.+..+.+|...|.+++|+ +.++++|+.|+.
T Consensus 247 ----~~~~~~~~~~~~v~~~~~--~~-~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~ 317 (435)
T 1p22_A 247 ----TLRRVLVGHRAAVNVVDF--DD-KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNT 317 (435)
T ss_dssp ----EEEEEECCCSSCEEEEEE--ET-TEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSC
T ss_pred ----eeeeEecCCCCcEEEEEe--CC-CEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCe
Confidence 233677899999999999 44 699999999999999999999999999999999999994 789999999999
Q ss_pred EEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCc-------eeEeeecCCCceEE
Q psy14130 243 VRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTP-------LALETVDSSSGVLF 315 (494)
Q Consensus 243 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~-------~~~~~~~~~~~v~~ 315 (494)
|++||+++++++..+.+|... +.++.+ + +.++++| +.||.|++||+++...+ .......|...|.+
T Consensus 318 i~iwd~~~~~~~~~~~~h~~~-v~~~~~--~-~~~l~sg---~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 390 (435)
T 1p22_A 318 IRLWDIECGACLRVLEGHEEL-VRCIRF--D-NKRIVSG---AYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFR 390 (435)
T ss_dssp EEEEETTTCCEEEEECCCSSC-EEEEEC--C-SSEEEEE---ETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCC
T ss_pred EEEEECCCCCEEEEEeCCcCc-EEEEEe--c-CCEEEEE---eCCCcEEEEECCCCCCccccccchheeeccCCCCCeEE
Confidence 999999999999999999887 888887 4 4556666 58999999998654321 22223356678999
Q ss_pred eEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEec
Q psy14130 316 PYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMP 366 (494)
Q Consensus 316 ~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p 366 (494)
++| +++.| ++|+.||.|++||+.++...... ....+..++.|.+
T Consensus 391 l~~--~~~~l-~s~s~Dg~i~iwd~~~~~~~~~~----~~~~~~~~~~~~~ 434 (435)
T 1p22_A 391 LQF--DEFQI-VSSSHDDTILIWDFLNDPAAQAE----PPRSPSRTYTYIS 434 (435)
T ss_dssp EEE--CSSCE-EECCSSSEEEEEC---------------------------
T ss_pred EEe--CCCEE-EEEeCCCEEEEEECCCCCCcccC----CCCCCccceeeec
Confidence 988 67777 89999999999999887643222 2234566666654
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2.6e-26 Score=245.42 Aligned_cols=220 Identities=15% Similarity=0.200 Sum_probs=190.3
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.|+|||+.++ ..+..+.+|...|.+++|+|++ .+|++|+.||.|++||+.+++.+..+.+|.+.|++++|+
T Consensus 35 g~v~iwd~~~~-------~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s 106 (814)
T 3mkq_A 35 GRVEIWNYETQ-------VEVRSIQVTETPVRAGKFIARK-NWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVH 106 (814)
T ss_dssp SEEEEEETTTT-------EEEEEEECCSSCEEEEEEEGGG-TEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEC
T ss_pred CEEEEEECCCC-------ceEEEEecCCCcEEEEEEeCCC-CEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEe
Confidence 47999999988 6778888999999999999998 799999999999999999999999999999999999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCC-ceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTG-LVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV 307 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~ 307 (494)
|++++|++++.|+.|++||++++ .....+.+|... +..+.|+|.++.++++| +.|+.|++||+++........ .
T Consensus 107 ~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~-v~~~~~~p~~~~~l~~~---~~dg~v~vwd~~~~~~~~~~~-~ 181 (814)
T 3mkq_A 107 PTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHF-VMCVAFNPKDPSTFASG---CLDRTVKVWSLGQSTPNFTLT-T 181 (814)
T ss_dssp SSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSC-EEEEEEETTEEEEEEEE---ETTSEEEEEETTCSSCSEEEE-C
T ss_pred CCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCc-EEEEEEEcCCCCEEEEE---eCCCeEEEEECCCCcceeEEe-c
Confidence 99999999999999999999987 577788888887 99999999446667777 589999999998765544333 2
Q ss_pred cCCCceEEeEEeC--CCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEe
Q psy14130 308 DSSSGVLFPYYDH--DTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKL 383 (494)
Q Consensus 308 ~~~~~v~~~~~~~--~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l 383 (494)
.+...+.+++|+| ++..| ++|+.||.|++||+.+++....+. .+..+|.+++|+|++..++++ |+.+++|++
T Consensus 182 ~~~~~v~~~~~~~~~~~~~l-~~~~~dg~i~~~d~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~ 257 (814)
T 3mkq_A 182 GQERGVNYVDYYPLPDKPYM-ITASDDLTIKIWDYQTKSCVATLE---GHMSNVSFAVFHPTLPIIISGSEDGTLKIWNS 257 (814)
T ss_dssp CCTTCCCEEEECCSTTCCEE-EEECTTSEEEEEETTTTEEEEEEE---CCSSCEEEEEECSSSSEEEEEETTSCEEEEET
T ss_pred CCCCCEEEEEEEECCCCCEE-EEEeCCCEEEEEECCCCcEEEEEc---CCCCCEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 3447899999999 88888 889999999999999987644432 235789999999999887775 899999998
Q ss_pred eC
Q psy14130 384 HT 385 (494)
Q Consensus 384 ~~ 385 (494)
.+
T Consensus 258 ~~ 259 (814)
T 3mkq_A 258 ST 259 (814)
T ss_dssp TT
T ss_pred CC
Confidence 76
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.95 E-value=9.6e-27 Score=214.86 Aligned_cols=174 Identities=15% Similarity=0.197 Sum_probs=134.4
Q ss_pred CcEEEEEcCC-CCCCCCcccceEecccccccEEEEEEcC---CCCCEEEEEeCCCeEEEEECCCCeEEEEecCCC---Cc
Q psy14130 149 HRVKLWYIPD-GGLSGNLNEWIMDLHGHKRRVGYIEWHP---TAENVVASAGFDYLIILWDVGKGEALTVIDCHP---DV 221 (494)
Q Consensus 149 ~~v~iw~~~~-~~~~~~~~~~~~~~~~h~~~V~~~~~~p---~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~---~~ 221 (494)
+.|++|++.. + +.+..+.+|...++.++|+| ++ .+||+|+.|++|+|||+.+++++.++.+|. ..
T Consensus 157 ~~V~~~~~s~dG-------~~~~s~~~~~~~v~~l~fs~~~g~~-~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~ 228 (356)
T 2w18_A 157 QQVEVMTFAEDG-------GGKENQFLMPPEETILTFAEVQGMQ-EALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQAS 228 (356)
T ss_dssp CEEEEEEECTTS-------CEEEEEEECCCSSCEEEEEEEETST-TEEEEEETTSEEEEEETTTCCEEEEEECCC---CC
T ss_pred CcEEEEEECCCC-------ceeeeeccCCCceeeEEeeccCCCC-ceEEEecCCCcEEEEECCCCcEEEEEcCCCcceee
Confidence 4799999954 5 55667788999999999999 65 699999999999999999999999998654 36
Q ss_pred eEEEEEcCCCCEE------------EEEeCCCeEEEEeCCCCceEEEee-----ecCCCCceEEEEECCCCeEEEEEecC
Q psy14130 222 INCLSFNRDGSRL------------VTTCKDKTVRVLDPRTGLVISQGV-----CHPGTRSSKAVFIGDTGRIVTTGFSR 284 (494)
Q Consensus 222 v~~l~~~~~~~~l------------~s~~~d~~v~iwd~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~g~~~ 284 (494)
+.+++|+|+|.++ ++|+.|++|++||+.+++.+..+. +|... .....+. +.++++|
T Consensus 229 v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~-~lsg~~s---g~~lASg--- 301 (356)
T 2w18_A 229 VCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGR-FLEGDVK---DHCAAAI--- 301 (356)
T ss_dssp CEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCC-EEEEEEE---TTEEEEE---
T ss_pred eEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcce-eEccccC---CCEEEEE---
Confidence 7788999999876 568889999999999999776652 44443 3322332 4577777
Q ss_pred CCCceEEEEeCCCCCCceeEeeecCCCceE-EeEEeCCCCEEEEEEeCCCcEEEEEe
Q psy14130 285 HSDRQVGLWDENDLNTPLALETVDSSSGVL-FPYYDHDTRILFLAGKGDGNIRYYEL 340 (494)
Q Consensus 285 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~g~~dg~i~~wd~ 340 (494)
+.|++|+|||+.+++....+. +|...+. .++|+|||++| ++|+.|++|++||+
T Consensus 302 S~DgTIkIWDl~tGk~l~tL~--gH~~~vvs~vafSPDG~~L-aSGS~D~TIklWd~ 355 (356)
T 2w18_A 302 LTSGTIAIWDLLLGQCTALLP--PVSDQHWSFVKWSGTDSHL-LAGQKDGNIFVYHY 355 (356)
T ss_dssp ETTSCEEEEETTTCSEEEEEC--CC--CCCCEEEECSSSSEE-EEECTTSCEEEEEE
T ss_pred cCCCcEEEEECCCCcEEEEec--CCCCCeEEEEEECCCCCEE-EEEECCCcEEEecC
Confidence 689999999999866433322 2444444 58999999999 99999999999996
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=99.95 E-value=9.2e-26 Score=223.02 Aligned_cols=217 Identities=13% Similarity=0.140 Sum_probs=175.4
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.|++||+.++ +.+..+..|...+.+++|+|++..++++++.|+.|++||+.+++.+..+..+ ..+.+++|+
T Consensus 191 ~~v~~~d~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~ 262 (433)
T 3bws_A 191 NAVHVFDLKTL-------AYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLS 262 (433)
T ss_dssp TEEEEEETTTC-------CEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEEC
T ss_pred CEEEEEECCCc-------eEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEc
Confidence 47999999887 5666777899999999999998544467778999999999999988888754 569999999
Q ss_pred CCCCEEEEEe--------CCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCC
Q psy14130 229 RDGSRLVTTC--------KDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNT 300 (494)
Q Consensus 229 ~~~~~l~s~~--------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~ 300 (494)
|+|+.|++++ .|+.|++||+++++.+..+. |... +..++|+|++..+++++ +.++.|++||+.+...
T Consensus 263 ~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~-~~~~-~~~~~~~~~g~~l~~~~---~~~~~v~v~d~~~~~~ 337 (433)
T 3bws_A 263 KDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG-PPGN-KRHIVSGNTENKIYVSD---MCCSKIEVYDLKEKKV 337 (433)
T ss_dssp TTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE-EEEC-EEEEEECSSTTEEEEEE---TTTTEEEEEETTTTEE
T ss_pred CCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeecc-CCCC-cceEEECCCCCEEEEEe---cCCCEEEEEECCCCcE
Confidence 9999999988 58899999999998776653 3333 78899999977898988 7899999999986443
Q ss_pred ceeEeeecCCCceEEeEEeCCCCEEEEEEeC--------------CCcEEEEEeeCCCceEEecccccCCCCeeEEEEec
Q psy14130 301 PLALETVDSSSGVLFPYYDHDTRILFLAGKG--------------DGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMP 366 (494)
Q Consensus 301 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~--------------dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p 366 (494)
...+.+...+..++|+|+++.+++++.. ||.|++||+.+++....+. ....+.+++|+|
T Consensus 338 ---~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~----~~~~~~~~~~s~ 410 (433)
T 3bws_A 338 ---QKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWE----AGNQPTGLDVSP 410 (433)
T ss_dssp ---EEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEE----CSSSEEEEEECT
T ss_pred ---EEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEec----CCCCCceEEEcC
Confidence 2334466789999999999998555543 5799999999987643332 245789999999
Q ss_pred CCceeeec---cceeEEEEeeC
Q psy14130 367 KRGCDVTQ---CEIFRFFKLHT 385 (494)
Q Consensus 367 ~~~~~~~~---~~~~~~~~l~~ 385 (494)
++..+++. ++.+++|++..
T Consensus 411 dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 411 DNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp TSCEEEEEETTTTEEEEEEETT
T ss_pred CCCEEEEEECCCCeEEEEEecC
Confidence 99876642 89999999863
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-26 Score=220.40 Aligned_cols=220 Identities=10% Similarity=0.083 Sum_probs=168.9
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECC---------CCeEEEEec-CC
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVG---------KGEALTVID-CH 218 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~---------~~~~~~~~~-~h 218 (494)
+.|++||+.++ +.+..+. ...|.++.|+|. +++++.|++|++|+.. +++.+..+. +|
T Consensus 58 g~v~iwd~~~~-------~~~~~~~--~~~v~~~~~~~~----~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~ 124 (343)
T 3lrv_A 58 GALHFTQLKDS-------KTITTIT--TPNPRTGGEHPA----IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDS 124 (343)
T ss_dssp TEEEEEEESSS-------SCEEEEE--EECCCTTCCCCS----EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCC
T ss_pred CcEEEEECCCC-------cEEEEEe--cCCceeeeeCCc----eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCC
Confidence 47999999988 4444443 466888889887 9999999999999765 455455544 67
Q ss_pred CCceEEEEEcC--CCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCC
Q psy14130 219 PDVINCLSFNR--DGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEN 296 (494)
Q Consensus 219 ~~~v~~l~~~~--~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~ 296 (494)
.+.|.+++|+| ++++|++++.|++|++||+++++.+.....+....+.+++|+|+ +.++++| +.|+.|++||++
T Consensus 125 ~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pd-g~~lasg---~~dg~i~iwd~~ 200 (343)
T 3lrv_A 125 ANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKD-SLLLALY---SPDGILDVYNLS 200 (343)
T ss_dssp SSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTT-SCEEEEE---CTTSCEEEEESS
T ss_pred CCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCC-CCEEEEE---cCCCEEEEEECC
Confidence 78999999999 99999999999999999999999877665555444899999998 6788887 799999999999
Q ss_pred CCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCe--eEEEEecCCceeee-
Q psy14130 297 DLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQ--RGLGFMPKRGCDVT- 373 (494)
Q Consensus 297 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v--~~~~~~p~~~~~~~- 373 (494)
+...........|...|.+++|+|++.+| ++++ |+.|++||+++++....+.....+..++ .+++|+|++.++++
T Consensus 201 ~~~~~~~~~~~~h~~~v~~l~fs~~g~~l-~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~ 278 (343)
T 3lrv_A 201 SPDQASSRFPVDEEAKIKEVKFADNGYWM-VVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAY 278 (343)
T ss_dssp CTTSCCEECCCCTTSCEEEEEECTTSSEE-EEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEE
T ss_pred CCCCCccEEeccCCCCEEEEEEeCCCCEE-EEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEe
Confidence 87654222222367899999999999999 7777 5599999999987642221110111223 46999999999988
Q ss_pred -c-cceeEEEEeeCCC
Q psy14130 374 -Q-CEIFRFFKLHTTR 387 (494)
Q Consensus 374 -~-~~~~~~~~l~~~~ 387 (494)
+ ++.+++|++....
T Consensus 279 s~~d~~i~v~~~~~~~ 294 (343)
T 3lrv_A 279 SNESNSLTIYKFDKKT 294 (343)
T ss_dssp ETTTTEEEEEEECTTT
T ss_pred cCCCCcEEEEEEcccc
Confidence 7 9999999997643
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2.9e-26 Score=218.97 Aligned_cols=221 Identities=12% Similarity=0.054 Sum_probs=179.9
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCC-EEEEEeCCCeEEEEEC-CCCeEEEEecC--CCCceE
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAEN-VVASAGFDYLIILWDV-GKGEALTVIDC--HPDVIN 223 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~-~l~s~s~d~~v~iwd~-~~~~~~~~~~~--h~~~v~ 223 (494)
++.|+||++.++... .....+.+|...|.+++|+|++ . +|++|+.|+.|++||+ .+++. ..+.+ |...|.
T Consensus 32 d~~v~iw~~~~~~~~----~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~ 105 (342)
T 1yfq_A 32 DGSLTVYKFDIQAKN----VDLLQSLRYKHPLLCCNFIDNT-DLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANLGIC 105 (342)
T ss_dssp TSEEEEEEEETTTTE----EEEEEEEECSSCEEEEEEEESS-SEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCSCEE
T ss_pred CCeEEEEEeCCCCcc----ccceeeeecCCceEEEEECCCC-CcEEEEEcCCCeEEEEEeccCCce-EeccccCCCCceE
Confidence 357999999877311 1244556899999999999997 8 9999999999999999 77754 77888 999999
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEeCCC---------CceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEe
Q psy14130 224 CLSFNRDGSRLVTTCKDKTVRVLDPRT---------GLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWD 294 (494)
Q Consensus 224 ~l~~~~~~~~l~s~~~d~~v~iwd~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd 294 (494)
+++|+| +.+|++++.|+.|++||+++ ++++..+. |... +..+.|+++. + ++| +.|+.|++||
T Consensus 106 ~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~-v~~~~~~~~~--l-~~~---~~d~~i~i~d 176 (342)
T 1yfq_A 106 RICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNK-IFTMDTNSSR--L-IVG---MNNSQVQWFR 176 (342)
T ss_dssp EEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCC-EEEEEECSSE--E-EEE---ESTTEEEEEE
T ss_pred EEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCc-eEEEEecCCc--E-EEE---eCCCeEEEEE
Confidence 999999 99999999999999999987 77666666 6665 8999998873 4 444 4899999999
Q ss_pred CCC-CCCceeEeeecCCCceEEeEEeC-CCCEEEEEEeCCCcEEEEEeeCC------CceEEeccccc-------CCCCe
Q psy14130 295 END-LNTPLALETVDSSSGVLFPYYDH-DTRILFLAGKGDGNIRYYELTNE------RPYIHFLNQSL-------SGAPQ 359 (494)
Q Consensus 295 ~~~-~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~g~~dg~i~~wd~~~~------~~~~~~~~~~~-------~~~~v 359 (494)
+++ ...........+...+.+++|+| +++.+ ++|+.||.|++|++... +....+ ..+. +..+|
T Consensus 177 ~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l-~~~~~dg~i~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i 254 (342)
T 1yfq_A 177 LPLCEDDNGTIEESGLKYQIRDVALLPKEQEGY-ACSSIDGRVAVEFFDDQGDDYNSSKRFAF-RCHRLNLKDTNLAYPV 254 (342)
T ss_dssp SSCCTTCCCEEEECSCSSCEEEEEECSGGGCEE-EEEETTSEEEEEECCTTCCSTTCTTCEEE-ECCCCCTTCCSSCCCE
T ss_pred CCccccccceeeecCCCCceeEEEECCCCCCEE-EEEecCCcEEEEEEcCCCcccccccceee-ecccccccccccceeE
Confidence 998 65544445556678899999999 99988 88999999999999887 544333 2222 13489
Q ss_pred eEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 360 RGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 360 ~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
.+++|+|++.+++++ ++.+++|++..
T Consensus 255 ~~~~~s~~~~~l~~~~~dg~i~vwd~~~ 282 (342)
T 1yfq_A 255 NSIEFSPRHKFLYTAGSDGIISCWNLQT 282 (342)
T ss_dssp EEEEECTTTCCEEEEETTSCEEEEETTT
T ss_pred EEEEEcCCCCEEEEecCCceEEEEcCcc
Confidence 999999999888775 88999999987
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-26 Score=229.07 Aligned_cols=229 Identities=14% Similarity=0.166 Sum_probs=170.5
Q ss_pred CcEEEEEcCCCCCC----CCcccceEeccccc------------ccEEEEEEcCCCC-CEEEEEeCCCeEEEEECCCCeE
Q psy14130 149 HRVKLWYIPDGGLS----GNLNEWIMDLHGHK------------RRVGYIEWHPTAE-NVVASAGFDYLIILWDVGKGEA 211 (494)
Q Consensus 149 ~~v~iw~~~~~~~~----~~~~~~~~~~~~h~------------~~V~~~~~~p~~~-~~l~s~s~d~~v~iwd~~~~~~ 211 (494)
+.|+||++.++... .........+.+|. ..|.+++|+|++. ..|++++.|++|++||+.++..
T Consensus 50 g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~ 129 (447)
T 3dw8_B 50 GRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDK 129 (447)
T ss_dssp SEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEE
T ss_pred CeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccC
Confidence 47999999876410 01112467888998 8899999999963 4899999999999999976443
Q ss_pred E---------------------------------------EE-ecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy14130 212 L---------------------------------------TV-IDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTG 251 (494)
Q Consensus 212 ~---------------------------------------~~-~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~ 251 (494)
. .. ..+|...|++++|+|++++|++| .|+.|++||++++
T Consensus 130 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~ 208 (447)
T 3dw8_B 130 RPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-DDLRINLWHLEIT 208 (447)
T ss_dssp EEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEE
T ss_pred CcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCC
Confidence 2 12 36799999999999999999998 7999999999944
Q ss_pred -ceEE-------EeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCce-eEeeec-CCC----------
Q psy14130 252 -LVIS-------QGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPL-ALETVD-SSS---------- 311 (494)
Q Consensus 252 -~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~-~~~~~~-~~~---------- 311 (494)
+.+. .+..|... +..++|+|++..++++| +.|+.|++||+++..... ....+. +..
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~-v~~~~~~p~~~~~l~s~---~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (447)
T 3dw8_B 209 DRSFNIVDIKPANMEELTEV-ITAAEFHPNSCNTFVYS---SSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEI 284 (447)
T ss_dssp EEEEEEEECCCSSGGGCCCC-EEEEEECSSCTTEEEEE---ETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHH
T ss_pred CceeeeeecccccccccCcc-eEEEEECCCCCcEEEEE---eCCCeEEEEECcCCccccceeeEeccCCCcccccccccc
Confidence 3444 24577776 99999999964677777 699999999998765311 011122 222
Q ss_pred --ceEEeEEeCCCCEEEEEEeCCCcEEEEEeeC-CCceEEecccccCC----------C---CeeEEEEecCCceeeec-
Q psy14130 312 --GVLFPYYDHDTRILFLAGKGDGNIRYYELTN-ERPYIHFLNQSLSG----------A---PQRGLGFMPKRGCDVTQ- 374 (494)
Q Consensus 312 --~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~-~~~~~~~~~~~~~~----------~---~v~~~~~~p~~~~~~~~- 374 (494)
.+.+++|+|++++| ++++. +.|++||+++ ++++..+.. +... . .+..++|+|++.+++++
T Consensus 285 ~~~v~~~~~s~~g~~l-~~~~~-~~v~iwd~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s 361 (447)
T 3dw8_B 285 ISSISDVKFSHSGRYM-MTRDY-LSVKVWDLNMENRPVETYQV-HEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGS 361 (447)
T ss_dssp TTCEEEEEECTTSSEE-EEEES-SEEEEEETTCCSSCSCCEES-CGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEEC
T ss_pred CceEEEEEECCCCCEE-EEeeC-CeEEEEeCCCCccccceeec-cccccccccccccccccccceEEEECCCCCEEEEec
Confidence 79999999999998 77877 9999999997 665433322 1110 0 13349999999988875
Q ss_pred -cceeEEEEeeC
Q psy14130 375 -CEIFRFFKLHT 385 (494)
Q Consensus 375 -~~~~~~~~l~~ 385 (494)
|+.+++|++..
T Consensus 362 ~dg~v~iwd~~~ 373 (447)
T 3dw8_B 362 YNNFFRMFDRNT 373 (447)
T ss_dssp STTEEEEEETTT
T ss_pred cCCEEEEEEcCC
Confidence 89999999987
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.2e-25 Score=221.63 Aligned_cols=202 Identities=13% Similarity=0.083 Sum_probs=165.5
Q ss_pred cccccEEEEEEcCCCCCE-EEEEeCCCeEEEEECC--CCeEEEEec--CCCCceEEEEEcCCCCEEEEEeCCCeEEEEeC
Q psy14130 174 GHKRRVGYIEWHPTAENV-VASAGFDYLIILWDVG--KGEALTVID--CHPDVINCLSFNRDGSRLVTTCKDKTVRVLDP 248 (494)
Q Consensus 174 ~h~~~V~~~~~~p~~~~~-l~s~s~d~~v~iwd~~--~~~~~~~~~--~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~ 248 (494)
+|...|.+++|+|++ .+ +++|+.|+.|++||+. +++.+..+. .|...|++++|+|++++|++++.|+.|++||+
T Consensus 100 ~~~~~v~~~~~s~d~-~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~ 178 (450)
T 2vdu_B 100 PIYSYIRNLRLTSDE-SRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDI 178 (450)
T ss_dssp CCCCCEEEEEECTTS-SEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred ccCCceEEEEEcCCC-CEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEec
Confidence 466689999999998 56 5999999999999999 888887776 57789999999999999999999999999999
Q ss_pred CCCceEE----EeeecCCCCceEEEEECC--CCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCC
Q psy14130 249 RTGLVIS----QGVCHPGTRSSKAVFIGD--TGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDT 322 (494)
Q Consensus 249 ~~~~~~~----~~~~~~~~~~~~~~~~~~--~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 322 (494)
.+++... .+.+|... +..+.|+|+ ++.++++| +.|+.|++||+++...... ....|...|.+++|+ ++
T Consensus 179 ~~~~~~~~~~~~~~~h~~~-v~~~~~sp~~~~~~~l~s~---~~d~~i~vwd~~~~~~~~~-~~~~h~~~v~~~~~s-d~ 252 (450)
T 2vdu_B 179 NSIPEEKFTQEPILGHVSM-LTDVHLIKDSDGHQFIITS---DRDEHIKISHYPQCFIVDK-WLFGHKHFVSSICCG-KD 252 (450)
T ss_dssp TSCCCSSCCCCCSEECSSC-EEEEEEEECTTSCEEEEEE---ETTSCEEEEEESCTTCEEE-ECCCCSSCEEEEEEC-ST
T ss_pred CCcccccccceeeecccCc-eEEEEEcCCCCCCcEEEEE---cCCCcEEEEECCCCceeee-eecCCCCceEEEEEC-CC
Confidence 8887544 77888877 999999998 24455555 5899999999987654322 223567889999999 99
Q ss_pred CEEEEEEeCCCcEEEEEeeCCCceEEecccc----------------------cCCCCeeEEEEecCCceeee---ccce
Q psy14130 323 RILFLAGKGDGNIRYYELTNERPYIHFLNQS----------------------LSGAPQRGLGFMPKRGCDVT---QCEI 377 (494)
Q Consensus 323 ~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~----------------------~~~~~v~~~~~~p~~~~~~~---~~~~ 377 (494)
++| ++|+.|+.|++||+.+++.+..+.... .....+.+++|+|++.++++ .++.
T Consensus 253 ~~l-~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~ 331 (450)
T 2vdu_B 253 YLL-LSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKC 331 (450)
T ss_dssp TEE-EEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSE
T ss_pred CEE-EEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCe
Confidence 998 899999999999999998755442110 22356899999999987766 3789
Q ss_pred eEEEEe
Q psy14130 378 FRFFKL 383 (494)
Q Consensus 378 ~~~~~l 383 (494)
+++|++
T Consensus 332 i~iw~~ 337 (450)
T 2vdu_B 332 IIILEM 337 (450)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 999999
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.95 E-value=1e-24 Score=212.55 Aligned_cols=216 Identities=13% Similarity=0.113 Sum_probs=174.3
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.|++||+.++ +.+..+..|. .+.+++|+|++..++++++.|+.|++||+.+++.+..+..+ ..+.+++|+
T Consensus 54 ~~i~v~d~~~~-------~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s 124 (391)
T 1l0q_A 54 NDVSIIDTATN-------NVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALS 124 (391)
T ss_dssp TEEEEEETTTT-------EEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEEC
T ss_pred CeEEEEECCCC-------eEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEEC
Confidence 47999999887 5556666454 89999999998544566777899999999999988888754 578999999
Q ss_pred CCCCEE-EEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee
Q psy14130 229 RDGSRL-VTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV 307 (494)
Q Consensus 229 ~~~~~l-~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~ 307 (494)
|+++.| ++++.|+.|++||+++++.+..+..+.. +..++|+|++..+++++ ..++.|++||+++... ....
T Consensus 125 ~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~~~~~~~~dg~~l~~~~---~~~~~v~~~d~~~~~~---~~~~ 196 (391)
T 1l0q_A 125 PDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRS--PKGIAVTPDGTKVYVAN---FDSMSISVIDTVTNSV---IDTV 196 (391)
T ss_dssp TTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSS--EEEEEECTTSSEEEEEE---TTTTEEEEEETTTTEE---EEEE
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCC--cceEEECCCCCEEEEEe---CCCCEEEEEECCCCeE---EEEE
Confidence 999977 6888899999999999998888876644 68899999977887888 7899999999987543 2333
Q ss_pred cCCCceEEeEEeCCCCEEEEEEe--CCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCcee-ee--ccceeEEEE
Q psy14130 308 DSSSGVLFPYYDHDTRILFLAGK--GDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCD-VT--QCEIFRFFK 382 (494)
Q Consensus 308 ~~~~~v~~~~~~~~~~~l~~~g~--~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~-~~--~~~~~~~~~ 382 (494)
.+...+.+++|+|++++|++++. .++.|++||+.+++.+..+. ....+.+++|+|++..+ ++ .++.+++|+
T Consensus 197 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~----~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d 272 (391)
T 1l0q_A 197 KVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIP----VGPDPAGIAVTPDGKKVYVALSFXNTVSVID 272 (391)
T ss_dssp ECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEE----CCSSEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred ecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEe----cCCCccEEEEccCCCEEEEEcCCCCEEEEEE
Confidence 45667899999999999966655 79999999999887643332 23457899999999765 44 389999999
Q ss_pred eeC
Q psy14130 383 LHT 385 (494)
Q Consensus 383 l~~ 385 (494)
+.+
T Consensus 273 ~~~ 275 (391)
T 1l0q_A 273 TAT 275 (391)
T ss_dssp TTT
T ss_pred CCC
Confidence 887
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.94 E-value=3.5e-25 Score=204.46 Aligned_cols=228 Identities=10% Similarity=0.001 Sum_probs=155.4
Q ss_pred EEEEEcCcEEEEEcCCCCCCCCcccceEecccccc-------------------------cEEEEEEcCC----CCCEEE
Q psy14130 143 FLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKR-------------------------RVGYIEWHPT----AENVVA 193 (494)
Q Consensus 143 ~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~-------------------------~V~~~~~~p~----~~~~l~ 193 (494)
+++.....|++|+..+... .+.++++.+|+. .|.+++|+|+ + +.++
T Consensus 57 ~~~~~~~~v~lw~~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~-~~l~ 131 (356)
T 2w18_A 57 IITACEDVVSLWKALDAWQ----WEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEK-QVLL 131 (356)
T ss_dssp EEEEESSEEEEEEESSSSB----EEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CC-EEEE
T ss_pred EEEeccceEEEcccCCCcc----ceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccc-cEEE
Confidence 3344555799999887611 133444555544 5666667777 5 4666
Q ss_pred EEeC--------------------CCeEEEEECC-CCeEEEEecCCCCceEEEEEcC---CCCEEEEEeCCCeEEEEeCC
Q psy14130 194 SAGF--------------------DYLIILWDVG-KGEALTVIDCHPDVINCLSFNR---DGSRLVTTCKDKTVRVLDPR 249 (494)
Q Consensus 194 s~s~--------------------d~~v~iwd~~-~~~~~~~~~~h~~~v~~l~~~~---~~~~l~s~~~d~~v~iwd~~ 249 (494)
+++. |+.|++|++. +++.+..+.+|...++.++|++ ++.+|++++.|++|+|||++
T Consensus 132 s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~ 211 (356)
T 2w18_A 132 KSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLK 211 (356)
T ss_dssp EEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETT
T ss_pred eCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECC
Confidence 6553 8888888884 4777777778888888888888 67899999999999999999
Q ss_pred CCceEEEeeecCC--CCceEEEEECCCCeEE-----------EEEecCCCCceEEEEeCCCCCCceeEe---eecCCCce
Q psy14130 250 TGLVISQGVCHPG--TRSSKAVFIGDTGRIV-----------TTGFSRHSDRQVGLWDENDLNTPLALE---TVDSSSGV 313 (494)
Q Consensus 250 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~-----------~~g~~~~~d~~i~iwd~~~~~~~~~~~---~~~~~~~v 313 (494)
+|++++++.+|.. ..+..++|+|++..++ ++| +.|++|++||..+........ ...+...+
T Consensus 212 TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSG---s~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~ 288 (356)
T 2w18_A 212 TGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLR---SPVFQLIVINPKTTLSVGVMLYCLPPGQAGRF 288 (356)
T ss_dssp TCCEEEEEECCC---CCCEEEEEEETTEEEEEEC---------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCE
T ss_pred CCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeecc---CCCcEEEEEECCCCEEEEEEEeeccCCCccee
Confidence 9999999986543 2256778999854432 455 789999999998754322111 01222233
Q ss_pred EEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEe
Q psy14130 314 LFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKL 383 (494)
Q Consensus 314 ~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l 383 (494)
.+..++ +..+ ++|+.|++|+|||+.+++.+..+. .+. ...+..++|+|++.+++++ |+++|+|++
T Consensus 289 lsg~~s--g~~l-ASgS~DgTIkIWDl~tGk~l~tL~-gH~-~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 289 LEGDVK--DHCA-AAILTSGTIAIWDLLLGQCTALLP-PVS-DQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEEEEE--TTEE-EEEETTSCEEEEETTTCSEEEEEC-CC---CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EccccC--CCEE-EEEcCCCcEEEEECCCCcEEEEec-CCC-CCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 333333 5566 999999999999999999765543 221 2234568999999998885 999999986
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=99.94 E-value=7.6e-26 Score=220.67 Aligned_cols=179 Identities=10% Similarity=0.025 Sum_probs=128.8
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEE--------------
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTV-------------- 214 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~-------------- 214 (494)
++|+|||+.++ .+...+.+|...|.+++|+|++.++|++|+.|++|++||+++++....
T Consensus 166 ~tv~~Wd~~~~-------~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s 238 (393)
T 4gq1_A 166 CTLIIWRLTDE-------GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLT 238 (393)
T ss_dssp SEEEEEEEETT-------EEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEE
T ss_pred CeEEEEECCCC-------ceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEe
Confidence 47999999877 666777889999999999999767899999999999999988754322
Q ss_pred -----------ecCCCCceEEEEEc-CCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCC-----------------Cc
Q psy14130 215 -----------IDCHPDVINCLSFN-RDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGT-----------------RS 265 (494)
Q Consensus 215 -----------~~~h~~~v~~l~~~-~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~-----------------~~ 265 (494)
..+|...+.++.|+ ++++.|++++.|+++++||+..++....+..|... ..
T Consensus 239 ~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (393)
T 4gq1_A 239 LNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSL 318 (393)
T ss_dssp EESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCS
T ss_pred cccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcc
Confidence 23577889999987 79999999999999999999887765555444322 01
Q ss_pred eEEEEEC-CCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEee
Q psy14130 266 SKAVFIG-DTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELT 341 (494)
Q Consensus 266 ~~~~~~~-~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~ 341 (494)
....+.+ .++.++++| +.|+.|++||+.+....... ..+...|.+++|+|||++| ++++.|| +.+|.+.
T Consensus 319 ~~~~~~~~~~~~~~~sg---s~Dg~V~lwd~~~~~~~~~~--~~~~~~V~svafspdG~~L-A~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 319 LGACPHPRYMDYFATAH---SQHGLIQLINTYEKDSNSIP--IQLGMPIVDFCWHQDGSHL-AIATEGS-VLLTRLM 388 (393)
T ss_dssp SCCEECSSCTTEEEEEE---TTTTEEEEEETTCTTCCEEE--EECSSCEEEEEECTTSSEE-EEEESSE-EEEEEEG
T ss_pred eeEEEccCCCCEEEEEE---CCCCEEEEEECCCCcEEEEe--cCCCCcEEEEEEcCCCCEE-EEEeCCC-eEEEEEe
Confidence 2233444 345677888 88999999999886654433 3466789999999999999 7887655 6666654
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.7e-24 Score=213.40 Aligned_cols=214 Identities=23% Similarity=0.370 Sum_probs=176.5
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.|++||+.++ +.+..+.+|...|.+++|++ ..+++|+.|++|++||+.+++.+..+.+|...|.+++|
T Consensus 179 g~i~vwd~~~~-------~~~~~~~~h~~~v~~~~~~~---~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~- 247 (445)
T 2ovr_B 179 RTLKVWNAETG-------ECIHTLYGHTSTVRCMHLHE---KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY- 247 (445)
T ss_dssp SCEEEEETTTT-------EEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE-
T ss_pred CeEEEEECCcC-------cEEEEECCCCCcEEEEEecC---CEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE-
Confidence 47999999988 77788899999999999963 57999999999999999999999999999999999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD 308 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~ 308 (494)
++.++++++.|+.|++||+++++.+..+.+|... +..+.| + +..+++| +.|+.|++||+++......+ ..
T Consensus 248 -~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~-v~~~~~--~-~~~l~~~---~~d~~i~i~d~~~~~~~~~~--~~ 317 (445)
T 2ovr_B 248 -DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNR-VYSLQF--D-GIHVVSG---SLDTSIRVWDVETGNCIHTL--TG 317 (445)
T ss_dssp -CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSC-EEEEEE--C-SSEEEEE---ETTSCEEEEETTTCCEEEEE--CC
T ss_pred -CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCc-eEEEEE--C-CCEEEEE---eCCCeEEEEECCCCCEEEEE--cC
Confidence 6889999999999999999999999999999887 888888 4 4455555 48999999999886543322 23
Q ss_pred CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccceeEEEEeeCC
Q psy14130 309 SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHTT 386 (494)
Q Consensus 309 ~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~~~ 386 (494)
+...+.++.+ +++.+ ++|+.||.|++||+++++.+..+.....+..+|.+++|+++.....+.|+.+++|++.++
T Consensus 318 ~~~~v~~~~~--~~~~l-~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~v~iwd~~~~ 392 (445)
T 2ovr_B 318 HQSLTSGMEL--KDNIL-VSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTG 392 (445)
T ss_dssp CCSCEEEEEE--ETTEE-EEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEEETTTC
T ss_pred CcccEEEEEE--eCCEE-EEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEEeCCCeEEEEECCCC
Confidence 5566776666 45666 899999999999999998766655444467889999997643333345999999999873
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=99.94 E-value=8.8e-25 Score=208.56 Aligned_cols=208 Identities=15% Similarity=0.112 Sum_probs=169.3
Q ss_pred EecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC----eEEEEecCCCCceEEEEEcC--CCCEEEEEeCCCeE
Q psy14130 170 MDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKG----EALTVIDCHPDVINCLSFNR--DGSRLVTTCKDKTV 243 (494)
Q Consensus 170 ~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~----~~~~~~~~h~~~v~~l~~~~--~~~~l~s~~~d~~v 243 (494)
..+.+|.+.|++++|+|++ .+|++|+.||.|++||+.++ +....+.+|...|++++|+| ++++|++++.|+.|
T Consensus 5 ~~~~gH~~~v~~~~~~~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v 83 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYG-RHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTV 83 (351)
T ss_dssp CEECCCSSCEEEEEECSSS-SEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred ccCcccccceeEEEEcCCC-CEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeE
Confidence 3567899999999999998 79999999999999999876 46777889999999999999 69999999999999
Q ss_pred EEEeCCCC---------ceEEEeeecCCCCceEEEEECC--CCeEEEEEecCCCCceEEEEeCCCCCCceeEe-------
Q psy14130 244 RVLDPRTG---------LVISQGVCHPGTRSSKAVFIGD--TGRIVTTGFSRHSDRQVGLWDENDLNTPLALE------- 305 (494)
Q Consensus 244 ~iwd~~~~---------~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~------- 305 (494)
++||++++ +.+..+..|... +..+.|+|+ +..+++++ .|+.|++||+++........
T Consensus 84 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~l~~~~----~dg~v~iwd~~~~~~~~~~~~~~~~~~ 158 (351)
T 3f3f_A 84 KLWEEDPDQEECSGRRWNKLCTLNDSKGS-LYSVKFAPAHLGLKLACLG----NDGILRLYDALEPSDLRSWTLTSEMKV 158 (351)
T ss_dssp EEEEECTTSCTTSSCSEEEEEEECCCSSC-EEEEEECCGGGCSEEEEEE----TTCEEEEEECSSTTCTTCCEEEEEEES
T ss_pred EEEecCCCcccccccCcceeeeecccCCc-eeEEEEcCCCCCcEEEEec----CCCcEEEecCCChHHhccccccccccc
Confidence 99999987 557788888887 999999998 55555555 89999999998765432221
Q ss_pred ----eecCCCceEEeEEeCC---CCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCC----ceeeec
Q psy14130 306 ----TVDSSSGVLFPYYDHD---TRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKR----GCDVTQ 374 (494)
Q Consensus 306 ----~~~~~~~v~~~~~~~~---~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~----~~~~~~ 374 (494)
...+...+.++.|+|+ +..+ ++++.|+.+.+|+...++.. .......+..+|.+++|+|++ .+++++
T Consensus 159 ~~~~~~~~~~~~~~~~~~p~~~~~~~l-~~~~~~~~~~~~~~~~~~~~-~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~ 236 (351)
T 3f3f_A 159 LSIPPANHLQSDFCLSWCPSRFSPEKL-AVSALEQAIIYQRGKDGKLH-VAAKLPGHKSLIRSISWAPSIGRWYQLIATG 236 (351)
T ss_dssp CSCCCSSCSCCCEEEEECCCSSSCCEE-EEEETTEEEEEEECTTSCEE-EEEECCCCCSCEEEEEECCCSSCSSEEEEEE
T ss_pred cccccCCcccceeEEEeccCCCCCcEE-EEecCCCcEEEEccCCCcee-eeeecCCCCcceeEEEECCCCCCcceEEEEE
Confidence 1135577899999997 7776 88999999988887776642 111222346789999999998 667664
Q ss_pred --cceeEEEEeeC
Q psy14130 375 --CEIFRFFKLHT 385 (494)
Q Consensus 375 --~~~~~~~~l~~ 385 (494)
|+.+++|++..
T Consensus 237 ~~dg~i~iwd~~~ 249 (351)
T 3f3f_A 237 CKDGRIRIFKITE 249 (351)
T ss_dssp ETTSCEEEEEEEE
T ss_pred cCCCeEEEEeCCC
Confidence 89999999987
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.8e-26 Score=223.59 Aligned_cols=203 Identities=12% Similarity=0.087 Sum_probs=151.5
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccccc-----cEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe-------EEEEe
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKR-----RVGYIEWHPTAENVVASAGFDYLIILWDVGKGE-------ALTVI 215 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~-----~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~-------~~~~~ 215 (494)
.+.|+|||... .+..+. |.. .|.+++|||+| ++||+|+.||+|++||+.++. .+.++
T Consensus 106 dg~V~iwd~~~---------~l~~l~-~~~~~~~~sv~svafSPDG-~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti 174 (588)
T 2j04_A 106 NGNVSVFKDNK---------MLTNLD-SKGNLSSRTYHCFEWNPIE-SSIVVGNEDGELQFFSIRKNSENTPEFYFESSI 174 (588)
T ss_dssp TSCEEEEETTE---------EEEECC-CSSCSTTTCEEEEEECSSS-SCEEEEETTSEEEEEECCCCTTTCCCCEEEEEE
T ss_pred CCcEEEEeCCc---------eeeecc-CCCccccccEEEEEEcCCC-CEEEEEcCCCEEEEEECCCCccccccceeeeee
Confidence 34799999532 344555 655 59999999998 799999999999999999875 35676
Q ss_pred ----cCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce---EEEee-ecCCCCceEEEEECCCCeEEEEEecCCCC
Q psy14130 216 ----DCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLV---ISQGV-CHPGTRSSKAVFIGDTGRIVTTGFSRHSD 287 (494)
Q Consensus 216 ----~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~l~~~g~~~~~d 287 (494)
.+|.+.|.+++|+|+| +++++.|++|++||+..++. .+++. +|... +..++|+ + ..++++ .+
T Consensus 175 ~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~-V~svaFs--g-~~LASa----~~ 244 (588)
T 2j04_A 175 RLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRK-ITDLKIV--D-YKVVLT----CP 244 (588)
T ss_dssp ECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSC-CCCEEEE--T-TEEEEE----CS
T ss_pred ecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCc-EEEEEEE--C-CEEEEE----eC
Confidence 6788999999999999 88999999999999988773 35664 66655 9999999 3 455555 26
Q ss_pred ceEEEEeCCCCCCceeEeeecCCCceEEeEE--eCCCCEEEEEEeCCCcEEEEEeeC-----CCceE-------------
Q psy14130 288 RQVGLWDENDLNTPLALETVDSSSGVLFPYY--DHDTRILFLAGKGDGNIRYYELTN-----ERPYI------------- 347 (494)
Q Consensus 288 ~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~g~~dg~i~~wd~~~-----~~~~~------------- 347 (494)
++|++||+.+... .....+|...+..++| +|++..| ++++.||+ ++|.... ...+.
T Consensus 245 ~tIkLWd~~~~~~--~~~~~gh~~~V~~va~~~s~d~~~L-a~a~edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~ 320 (588)
T 2j04_A 245 GYVHKIDLKNYSI--SSLKTGSLENFHIIPLNHEKESTIL-LMSNKTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTI 320 (588)
T ss_dssp SEEEEEETTTTEE--EEEECSCCSCCCEEEETTCSSCEEE-EECSSCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTT
T ss_pred CeEEEEECCCCeE--EEEEcCCCceEEEEEeeeCCCCCEE-EEEcCCCC-EEEeeccEEECCCceEEEEcCCEEEEEECC
Confidence 9999999986432 1223367888999999 9999888 88889999 9998731 11000
Q ss_pred -EecccccCCCCeeEEEEecCCceeeecc
Q psy14130 348 -HFLNQSLSGAPQRGLGFMPKRGCDVTQC 375 (494)
Q Consensus 348 -~~~~~~~~~~~v~~~~~~p~~~~~~~~~ 375 (494)
..+..+.+...|.+++|+|+|..++++.
T Consensus 321 g~~l~~~~~~~~I~~va~SPdG~~lA~~~ 349 (588)
T 2j04_A 321 WNEFNNYETTLVIHGISLSPDGYSIAIVY 349 (588)
T ss_dssp TTSSSSSCCEEEEEEEEECTTSSEEEEEE
T ss_pred CCceeeeccceEEEEEEECCCCCEEEEEE
Confidence 0011112223478899999988777654
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.2e-25 Score=234.14 Aligned_cols=211 Identities=12% Similarity=0.169 Sum_probs=172.8
Q ss_pred EecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECC--CCeEEEEecCCCCceEEEEEcCC--CCEEEEEeCCCeEEE
Q psy14130 170 MDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVG--KGEALTVIDCHPDVINCLSFNRD--GSRLVTTCKDKTVRV 245 (494)
Q Consensus 170 ~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~--~~~~~~~~~~h~~~v~~l~~~~~--~~~l~s~~~d~~v~i 245 (494)
..+.+|.+.|++++|+|++ .+|++|+.||+|++||+. +++.+..+.+|.+.|++++|+|+ +++|++|+.||.|++
T Consensus 3 ~~l~gH~~~V~~l~~s~dg-~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~v 81 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYG-KRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI 81 (753)
T ss_dssp -----CCCCEEEECCCSSS-CCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEE
T ss_pred eecccCcceeEEEEECCCC-CeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEE
Confidence 4578999999999999998 699999999999999998 45678889999999999999988 999999999999999
Q ss_pred EeCCCCc--eEEEeeecCCCCceEEEEECCC-CeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeC--
Q psy14130 246 LDPRTGL--VISQGVCHPGTRSSKAVFIGDT-GRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDH-- 320 (494)
Q Consensus 246 wd~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-- 320 (494)
||+++++ .+..+..|... +.++.|+|+. +.++++| +.||.|++||+++...........+...+.++.|+|
T Consensus 82 wd~~~~~~~~~~~~~~h~~~-V~~v~~sp~~~~~~l~sg---s~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~ 157 (753)
T 3jro_A 82 WKEENGRWSQIAVHAVHSAS-VNSVQWAPHEYGPLLLVA---SSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPAT 157 (753)
T ss_dssp EEEETTEEEEEEEECCCSSC-EEEEEECCGGGCSEEEEE---ETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC
T ss_pred EECCCCcccccccccCCCCC-eEEEEECCCCCCCEEEEE---eCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcc
Confidence 9999987 67777888887 9999999982 3445555 489999999998764444444456778999999999
Q ss_pred -----------CCCEEEEEEeCCCcEEEEEeeCCCceEEeccc-ccCCCCeeEEEEecC---Cceeeec--cceeEEEEe
Q psy14130 321 -----------DTRILFLAGKGDGNIRYYELTNERPYIHFLNQ-SLSGAPQRGLGFMPK---RGCDVTQ--CEIFRFFKL 383 (494)
Q Consensus 321 -----------~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~-~~~~~~v~~~~~~p~---~~~~~~~--~~~~~~~~l 383 (494)
++..+ ++|+.||.|++||++++......... ..+..+|.+++|+|+ +..++++ |+.+++|++
T Consensus 158 ~~~~~~~~~~~d~~~l-~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~ 236 (753)
T 3jro_A 158 IEEDGEHNGTKESRKF-VTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQ 236 (753)
T ss_dssp ---------CGGGCCE-EEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEE
T ss_pred cccccccccCCCCCEE-EEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecC
Confidence 47777 89999999999999988643333222 234678999999999 7888775 899999999
Q ss_pred eCC
Q psy14130 384 HTT 386 (494)
Q Consensus 384 ~~~ 386 (494)
...
T Consensus 237 ~~~ 239 (753)
T 3jro_A 237 DNE 239 (753)
T ss_dssp SSS
T ss_pred CCC
Confidence 873
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=3e-24 Score=206.76 Aligned_cols=221 Identities=17% Similarity=0.178 Sum_probs=170.9
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEE-
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSF- 227 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~- 227 (494)
+.|+|||+.+.+. .....+.+|...|.+++|+|++ .+|++++.|+.|++||+.+++.+. +.+|...|.+++|
T Consensus 64 g~i~iw~~~~~~~-----~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~ 136 (368)
T 3mmy_A 64 NDVRCWEVQDSGQ-----TIPKAQQMHTGPVLDVCWSDDG-SKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWI 136 (368)
T ss_dssp SEEEEEEECTTSC-----EEEEEEEECSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEE
T ss_pred CcEEEEEcCCCCc-----eeEEEeccccCCEEEEEECcCC-CEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEE
Confidence 4799999987321 2336788899999999999998 799999999999999999988776 4559999999999
Q ss_pred -cCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEee
Q psy14130 228 -NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALET 306 (494)
Q Consensus 228 -~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~ 306 (494)
++++++|++++.|+.|++||+++++.+..+..+.. +..+.+.++ .+++++ .++.+++||++..........
T Consensus 137 ~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~----~~~~i~~~~~~~~~~~~~~~~ 208 (368)
T 3mmy_A 137 KAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPER--CYCADVIYP--MAVVAT----AERGLIVYQLENQPSEFRRIE 208 (368)
T ss_dssp ECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSC--EEEEEEETT--EEEEEE----GGGCEEEEECSSSCEEEEECC
T ss_pred eCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCC--ceEEEecCC--eeEEEe----CCCcEEEEEeccccchhhhcc
Confidence 89999999999999999999999998888887753 566666654 455554 799999999987544333333
Q ss_pred ecCCCceEEeEEeCCCCE----EEEEEeCCCcEEEEEeeCCC---ceEEeccccc---------CCCCeeEEEEecCCce
Q psy14130 307 VDSSSGVLFPYYDHDTRI----LFLAGKGDGNIRYYELTNER---PYIHFLNQSL---------SGAPQRGLGFMPKRGC 370 (494)
Q Consensus 307 ~~~~~~v~~~~~~~~~~~----l~~~g~~dg~i~~wd~~~~~---~~~~~~~~~~---------~~~~v~~~~~~p~~~~ 370 (494)
........++.+.++... + ++|+.||.|++||++... ....+..... +..+|.+++|+|++.+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 287 (368)
T 3mmy_A 209 SPLKHQHRCVAIFKDKQNKPTGF-ALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGT 287 (368)
T ss_dssp CSCSSCEEEEEEEECTTSCEEEE-EEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCC
T ss_pred ccccCCCceEEEcccCCCCCCeE-EEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCE
Confidence 333345566666555543 5 899999999999999873 2222222111 1126999999999988
Q ss_pred eeec--cceeEEEEeeC
Q psy14130 371 DVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 371 ~~~~--~~~~~~~~l~~ 385 (494)
++++ |+.+++|++..
T Consensus 288 l~s~~~dg~i~iwd~~~ 304 (368)
T 3mmy_A 288 LATVGSDGRFSFWDKDA 304 (368)
T ss_dssp EEEEETTSCEEEEETTT
T ss_pred EEEEccCCeEEEEECCC
Confidence 8775 89999999887
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=99.93 E-value=6.3e-24 Score=209.83 Aligned_cols=224 Identities=11% Similarity=0.069 Sum_probs=177.3
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcC
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNR 229 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~ 229 (494)
.|++||+.++..... .....+.+|...|.+++|+|++ .++++++.|+.|++||+.+++.+..+..|...+.+++|+|
T Consensus 145 ~i~~~d~~~g~~~~~--~~~~~~~~~~~~v~~~~~~~~~-~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 221 (433)
T 3bws_A 145 GMDVLDINSGQTVRL--SPPEKYKKKLGFVETISIPEHN-ELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDP 221 (433)
T ss_dssp SEEEEETTTCCEEEE--CCCHHHHTTCCEEEEEEEGGGT-EEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEET
T ss_pred eEEEEECCCCeEeee--cCcccccccCCceeEEEEcCCC-EEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcC
Confidence 699999998743210 0111456899999999999998 7999999999999999999999999999999999999999
Q ss_pred CCCEEEEEe-CCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCC----CCceEEEEeCCCCCCceeE
Q psy14130 230 DGSRLVTTC-KDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRH----SDRQVGLWDENDLNTPLAL 304 (494)
Q Consensus 230 ~~~~l~s~~-~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~----~d~~i~iwd~~~~~~~~~~ 304 (494)
+++.+++++ .|+.|++||+++++.+..+..+.. +..++|+|++..+++++.... .|+.|++||+++....
T Consensus 222 ~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~--- 296 (433)
T 3bws_A 222 IRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGL--PRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLI--- 296 (433)
T ss_dssp TTTEEEEEETTTTEEEEEETTTTEEEEECCCCSE--EEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEE---
T ss_pred CCCEEEEEecCCCcEEEEECCCCcEEEEecCCCC--ceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEE---
Confidence 999885554 799999999999998887766543 789999999767766663111 4889999999875432
Q ss_pred eeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeecc---------
Q psy14130 305 ETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQC--------- 375 (494)
Q Consensus 305 ~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~--------- 375 (494)
....+...+..++|+|+++.++++++.|+.|++||+.+++....+ .....+.+++|+|++..++.++
T Consensus 297 ~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~----~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 372 (433)
T 3bws_A 297 DTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSI----PVFDKPNTIALSPDGKYLYVSCRGPNHPTEG 372 (433)
T ss_dssp EEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEE----ECSSSEEEEEECTTSSEEEEEECCCCCTTTC
T ss_pred eeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEe----cCCCCCCeEEEcCCCCEEEEEecCCCccccc
Confidence 222334578889999999988899999999999999988754332 2356799999999998665532
Q ss_pred --------ceeEEEEeeC
Q psy14130 376 --------EIFRFFKLHT 385 (494)
Q Consensus 376 --------~~~~~~~l~~ 385 (494)
+.+++|++.+
T Consensus 373 ~~~~g~~dg~v~~~d~~~ 390 (433)
T 3bws_A 373 YLKKGLVLGKVYVIDTTT 390 (433)
T ss_dssp TTSCCSSCCEEEEEETTT
T ss_pred cccccccceEEEEEECCC
Confidence 4899999876
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.5e-23 Score=204.21 Aligned_cols=184 Identities=9% Similarity=0.057 Sum_probs=148.1
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.|++||+.++ +.+..+.. ...+.+++|+|++..++++++.|+.|++||+.+++.+..+..+ ..+.+++|+
T Consensus 96 ~~v~v~d~~~~-------~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~ 166 (391)
T 1l0q_A 96 STLSVIDTTSN-------TVAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVT 166 (391)
T ss_dssp TEEEEEETTTT-------EEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEEC
T ss_pred CEEEEEECCCC-------eEEEEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEEC
Confidence 47999999987 55555554 4568999999998544588899999999999999998888865 567999999
Q ss_pred CCCCEE-EEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCC--CCceEEEEeCCCCCCceeEe
Q psy14130 229 RDGSRL-VTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRH--SDRQVGLWDENDLNTPLALE 305 (494)
Q Consensus 229 ~~~~~l-~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~--~d~~i~iwd~~~~~~~~~~~ 305 (494)
|+++.| ++++.|+.|++||+++++.+..+..+. . +..++|+|++..+++++ . .++.|++||+++... ..
T Consensus 167 ~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~-~~~~~~~~~g~~l~~~~---~~~~~~~v~~~d~~~~~~---~~ 238 (391)
T 1l0q_A 167 PDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEA-A-PSGIAVNPEGTKAYVTN---VDKYFNTVSMIDTGTNKI---TA 238 (391)
T ss_dssp TTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS-E-EEEEEECTTSSEEEEEE---ECSSCCEEEEEETTTTEE---EE
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCC-C-ccceEECCCCCEEEEEe---cCcCCCcEEEEECCCCeE---EE
Confidence 999987 577789999999999998877776443 3 78899999976666665 3 689999999987543 23
Q ss_pred eecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEe
Q psy14130 306 TVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHF 349 (494)
Q Consensus 306 ~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~ 349 (494)
.+.....+.+++|+|+++.|+++++.|+.|++||+.+++....+
T Consensus 239 ~~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~ 282 (391)
T 1l0q_A 239 RIPVGPDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATM 282 (391)
T ss_dssp EEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEecCCCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEE
Confidence 33345568899999999999889899999999999998765443
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.9e-23 Score=200.81 Aligned_cols=208 Identities=9% Similarity=0.070 Sum_probs=151.7
Q ss_pred cceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEE-EEEeCCCeEEE
Q psy14130 167 EWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRL-VTTCKDKTVRV 245 (494)
Q Consensus 167 ~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l-~s~~~d~~v~i 245 (494)
.++..+.+|...|.+++|+|+| ++|++|+.|+ +++||+.+++.+..... ..+..+++.++++.+ ++++.|++|++
T Consensus 10 ~~~~~~~~h~~~V~~v~fs~dg-~~la~g~~~~-~~iw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~v~i 85 (355)
T 3vu4_A 10 NPIVPENHVSNPVTDYEFNQDQ-SCLILSTLKS-FEIYNVHPVAHIMSQEM--RHLSKVRMLHRTNYVAFVTGVKEVVHI 85 (355)
T ss_dssp ---------CCCCCEEEECTTS-SEEEEECSSE-EEEEEETTEEEEEEEEC--SCCCEEEECTTSSEEEEECSSTTEEEE
T ss_pred CCccccccCCCceEEEEECCCC-CEEEEEcCCE-EEEEecCCcceeeeeec--CCeEEEEEcCCCCEEEEEECCccEEEE
Confidence 5556678899999999999998 7999988765 78999988876655442 247888999988877 56778899999
Q ss_pred EeCCCCceEEEeeecCCCCceEEEEECCC-----------------------------------CeEEEE-EecCCCCce
Q psy14130 246 LDPRTGLVISQGVCHPGTRSSKAVFIGDT-----------------------------------GRIVTT-GFSRHSDRQ 289 (494)
Q Consensus 246 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------~~l~~~-g~~~~~d~~ 289 (494)
||+++++.+..+..+ .. +..+.++++. ..++++ | +.+|.
T Consensus 86 Wd~~~~~~~~~~~~~-~~-v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg---~~~g~ 160 (355)
T 3vu4_A 86 WDDVKKQDVSRIKVD-AP-VKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNE---FNLGQ 160 (355)
T ss_dssp EETTTTEEEEEEECS-SC-EEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEES---SCTTC
T ss_pred EECCCCcEEEEEECC-Cc-eEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCC---CcCcE
Confidence 999999988887643 33 6666665431 112222 4 67888
Q ss_pred EEEEeCCCCCC--------------ceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCc-EEEEEeeCCCceEEeccccc
Q psy14130 290 VGLWDENDLNT--------------PLALETVDSSSGVLFPYYDHDTRILFLAGKGDGN-IRYYELTNERPYIHFLNQSL 354 (494)
Q Consensus 290 i~iwd~~~~~~--------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~-i~~wd~~~~~~~~~~~~~~~ 354 (494)
|++||+++... +.......|...|.+++|+|++++| ++|+.|++ |++||+++++.+..+... .
T Consensus 161 v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l-~s~s~d~~~v~iwd~~~~~~~~~~~~g-~ 238 (355)
T 3vu4_A 161 IHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMV-ATCSQDGTIIRVFKTEDGVLVREFRRG-L 238 (355)
T ss_dssp EEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEE-EEEETTCSEEEEEETTTCCEEEEEECT-T
T ss_pred EEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEE-EEEeCCCCEEEEEECCCCcEEEEEEcC-C
Confidence 88888876431 1012223567889999999999998 99999998 999999999876554321 1
Q ss_pred CCCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 355 SGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 355 ~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
+..+|.+++|+|++.+++++ |+.+++|++..
T Consensus 239 h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~ 271 (355)
T 3vu4_A 239 DRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFN 271 (355)
T ss_dssp CCSCEEEEEECTTSCEEEEEETTCEEEEEESSC
T ss_pred CCCcEEEEEECCCCCEEEEEECCCEEEEEEccC
Confidence 46789999999999988875 89999999976
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.92 E-value=2.5e-22 Score=197.01 Aligned_cols=213 Identities=13% Similarity=0.161 Sum_probs=162.1
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCC---eEEEEECCCCeEEEEecCCCCceEEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDY---LIILWDVGKGEALTVIDCHPDVINCLS 226 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~---~v~iwd~~~~~~~~~~~~h~~~v~~l~ 226 (494)
.|++||+... ....+.+|...|.+++|+|+| +.|++++.|+ .|++||+.+++.. .+..|.+.+.+++
T Consensus 160 ~i~i~d~~g~--------~~~~l~~~~~~v~~~~~Spdg-~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~ 229 (415)
T 2hqs_A 160 ELRVSDYDGY--------NQFVVHRSPQPLMSPAWSPDG-SKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPA 229 (415)
T ss_dssp EEEEEETTSC--------SCEEEEEESSCEEEEEECTTS-SEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEE
T ss_pred eEEEEcCCCC--------CCEEEeCCCCcceeeEEcCCC-CEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEE
Confidence 6999998743 345677899999999999999 6899998875 9999999988765 5667888999999
Q ss_pred EcCCCCEEE-EEeCCC--eEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCc--eEEEEeCCCCCCc
Q psy14130 227 FNRDGSRLV-TTCKDK--TVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDR--QVGLWDENDLNTP 301 (494)
Q Consensus 227 ~~~~~~~l~-s~~~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~--~i~iwd~~~~~~~ 301 (494)
|+|||+.|+ +++.|+ .|++||+++++. ..+..|... +..+.|+|++..+++++ ..++ .|.+||+.+...
T Consensus 230 ~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~-~~~~~~spdg~~l~~~s---~~~g~~~i~~~d~~~~~~- 303 (415)
T 2hqs_A 230 FSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSN-NTEPTWFPDSQNLAFTS---DQAGRPQVYKVNINGGAP- 303 (415)
T ss_dssp ECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSC-EEEEEECTTSSEEEEEE---CTTSSCEEEEEETTSSCC-
T ss_pred EcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCc-ccceEECCCCCEEEEEE---CCCCCcEEEEEECCCCCE-
Confidence 999999888 666655 499999998875 566667665 88999999977777776 3344 788889886542
Q ss_pred eeEeeecCCCceEEeEEeCCCCEEEEEEeC--CCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cc-
Q psy14130 302 LALETVDSSSGVLFPYYDHDTRILFLAGKG--DGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CE- 376 (494)
Q Consensus 302 ~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~--dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~- 376 (494)
..+ ..+...+..++|+|+|++|+.++.. +..|++||+.+++. ..+... ..+.+++|+|++..++.. ++
T Consensus 304 ~~l--~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~--~~l~~~---~~~~~~~~spdg~~l~~~s~~~~ 376 (415)
T 2hqs_A 304 QRI--TWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV--QVLSST---FLDETPSLAPNGTMVIYSSSQGM 376 (415)
T ss_dssp EEC--CCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE--EECCCS---SSCEEEEECTTSSEEEEEEEETT
T ss_pred EEE--ecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE--EEecCC---CCcCCeEEcCCCCEEEEEEcCCC
Confidence 211 2244578889999999999555544 35899999998875 223222 378999999999877664 33
Q ss_pred --eeEEEEeeC
Q psy14130 377 --IFRFFKLHT 385 (494)
Q Consensus 377 --~~~~~~l~~ 385 (494)
.+.+|++..
T Consensus 377 ~~~l~~~d~~g 387 (415)
T 2hqs_A 377 GSVLNLVSTDG 387 (415)
T ss_dssp EEEEEEEETTS
T ss_pred ccEEEEEECCC
Confidence 567777654
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=5.1e-21 Score=193.58 Aligned_cols=224 Identities=13% Similarity=0.111 Sum_probs=164.7
Q ss_pred CcEEEEEcCCCCCCCCcccceEeccc----------ccc-cEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEE--Ee
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHG----------HKR-RVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALT--VI 215 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~----------h~~-~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~--~~ 215 (494)
++|.|||..+. +++..+.. |.. .+.++.++|++..++++...++.|.+||+.+.+.+. .+
T Consensus 248 ~~v~v~D~~t~-------~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i 320 (543)
T 1nir_A 248 PQFAIMDGETL-------EPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI 320 (543)
T ss_dssp SEEEEEETTTC-------CEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE
T ss_pred CeEEEEecccc-------ccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEe
Confidence 57999999887 44444432 333 789999999887788899999999999998765433 44
Q ss_pred cCCCCceEEEEEcCCCCEEEEEe-CCCeEEEEeCCCCceEEEeee----cCCCCceEEEEECCCCeEEEEEecCC-CCce
Q psy14130 216 DCHPDVINCLSFNRDGSRLVTTC-KDKTVRVLDPRTGLVISQGVC----HPGTRSSKAVFIGDTGRIVTTGFSRH-SDRQ 289 (494)
Q Consensus 216 ~~h~~~v~~l~~~~~~~~l~s~~-~d~~v~iwd~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~g~~~~-~d~~ 289 (494)
. +...+.++.|+|+|++|++++ .+++|.+||+.+++++..+.. |.+. ... .+.|+++.+++++ . .|++
T Consensus 321 ~-~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~-g~~-~~~p~~g~~~~s~---~~~d~~ 394 (543)
T 1nir_A 321 G-AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGR-GAN-FVHPKYGPVWSTS---HLGDGS 394 (543)
T ss_dssp E-CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTT-CEE-EEETTTEEEEEEE---BSSSSE
T ss_pred c-cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCC-Ccc-cCCCCCccEEEec---cCCCce
Confidence 4 667788999999999877655 589999999999998888774 5443 222 2567778888887 4 5799
Q ss_pred EEEEeCCCCCC----ceeEeeec-CCCceEEeEEeCCCCEEEEEE--e----CCCcEEEEEeeCCCceEEecc--c----
Q psy14130 290 VGLWDENDLNT----PLALETVD-SSSGVLFPYYDHDTRILFLAG--K----GDGNIRYYELTNERPYIHFLN--Q---- 352 (494)
Q Consensus 290 i~iwd~~~~~~----~~~~~~~~-~~~~v~~~~~~~~~~~l~~~g--~----~dg~i~~wd~~~~~~~~~~~~--~---- 352 (494)
|.+||+.+... ...+..+. +..++..+.++|++++|++.. . .+++|.+||+.+++.....+. .
T Consensus 395 V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~ 474 (543)
T 1nir_A 395 ISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADL 474 (543)
T ss_dssp EEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCC
T ss_pred EEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhccc
Confidence 99999986211 11223333 346778899999999995543 1 277999999999886533321 1
Q ss_pred ccCCCCeeEEEEecCCceeeec-------cceeEEEEeeC
Q psy14130 353 SLSGAPQRGLGFMPKRGCDVTQ-------CEIFRFFKLHT 385 (494)
Q Consensus 353 ~~~~~~v~~~~~~p~~~~~~~~-------~~~~~~~~l~~ 385 (494)
..+...+..++|+|+|..+..+ ++.+.+|+..+
T Consensus 475 ~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t 514 (543)
T 1nir_A 475 GEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKT 514 (543)
T ss_dssp CSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTT
T ss_pred CCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCC
Confidence 1235679999999999977632 58999999887
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=99.89 E-value=2.8e-20 Score=177.24 Aligned_cols=235 Identities=11% Similarity=0.130 Sum_probs=161.2
Q ss_pred CcEEEEEcC--CCCCCCCcccceEecccccccEEEEEEcCCCCCEEE-EEeCCCeEEEEECC---CCeEEEEecCCCCce
Q psy14130 149 HRVKLWYIP--DGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVA-SAGFDYLIILWDVG---KGEALTVIDCHPDVI 222 (494)
Q Consensus 149 ~~v~iw~~~--~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~-s~s~d~~v~iwd~~---~~~~~~~~~~h~~~v 222 (494)
+.|.+|++. ++.. ..+..+..+. .+.+++|+|++ +.|+ ++..++.|.+||+. ..+.+..+.. ...+
T Consensus 60 ~~v~~~~~~~~~~~~-----~~~~~~~~~~-~~~~~~~s~dg-~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~ 131 (343)
T 1ri6_A 60 FRVLAYRIAPDDGAL-----TFAAESALPG-SLTHISTDHQG-QFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG-LDGC 131 (343)
T ss_dssp TEEEEEEECTTTCCE-----EEEEEEECSS-CCSEEEECTTS-SEEEEEETTTTEEEEEEEETTEEEEEEEEECC-CTTB
T ss_pred CeEEEEEecCCCCce-----eeccccccCC-CCcEEEEcCCC-CEEEEEecCCCeEEEEECCCCccccccccccC-CCCc
Confidence 379999997 4421 2333444333 78899999998 5554 44558999999994 3445555554 3468
Q ss_pred EEEEEcCCCCEEEEEe-CCCeEEEEeCCC-CceEE----EeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCC
Q psy14130 223 NCLSFNRDGSRLVTTC-KDKTVRVLDPRT-GLVIS----QGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEN 296 (494)
Q Consensus 223 ~~l~~~~~~~~l~s~~-~d~~v~iwd~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~ 296 (494)
.+++|+|+|++|++++ .++.|++||+.+ ++... ....+.+..+..++|+|++..+++++ ..++.|.+||+.
T Consensus 132 ~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~---~~~~~i~~~~~~ 208 (343)
T 1ri6_A 132 HSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVN---ELNSSVDVWELK 208 (343)
T ss_dssp CCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEE---TTTTEEEEEESS
T ss_pred eEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEe---CCCCEEEEEEec
Confidence 9999999999888887 899999999987 65432 33444444477899999977788887 689999999996
Q ss_pred CCC-CceeEeee---c----CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCC
Q psy14130 297 DLN-TPLALETV---D----SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKR 368 (494)
Q Consensus 297 ~~~-~~~~~~~~---~----~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~ 368 (494)
... ........ . ....+..++|+|++++|++++..|+.|.+||+.........+........+.+++|+|++
T Consensus 209 ~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg 288 (343)
T 1ri6_A 209 DPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSG 288 (343)
T ss_dssp CTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTS
T ss_pred CCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCC
Confidence 421 11111111 1 123466799999999997888889999999998321112222223333448899999999
Q ss_pred ceeeec---cceeEEEEeeCCCCeEEEeE
Q psy14130 369 GCDVTQ---CEIFRFFKLHTTRNMCEPIS 394 (494)
Q Consensus 369 ~~~~~~---~~~~~~~~l~~~~~~~~~~~ 394 (494)
..++.. ++.+++|++.......+.+.
T Consensus 289 ~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 317 (343)
T 1ri6_A 289 KYLIAAGQKSHHISVYEIVGEQGLLHEKG 317 (343)
T ss_dssp SEEEEECTTTCEEEEEEEETTTTEEEEEE
T ss_pred CEEEEecCCCCeEEEEEEcCCCceeeEcc
Confidence 855543 68999998875333444443
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.88 E-value=4.3e-20 Score=175.34 Aligned_cols=223 Identities=9% Similarity=0.068 Sum_probs=160.3
Q ss_pred cEEEEEcCCCCCCCCcccc-eEecccccccEEEEEEcCCCCCEEEEEeCCC---eEEEEECCCCeEEEEecCCCCceEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEW-IMDLHGHKRRVGYIEWHPTAENVVASAGFDY---LIILWDVGKGEALTVIDCHPDVINCL 225 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~-~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~---~v~iwd~~~~~~~~~~~~h~~~v~~l 225 (494)
.|.+||+.++ +. ...+..+.....+++|+|++ ++|+++..++ .|.+||+.+++.+..+.. .....++
T Consensus 63 ~i~~~d~~~~-------~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~ 133 (331)
T 3u4y_A 63 TLVQIETQLE-------PPKVVAIQEGQSSMADVDITPDD-QFAVTVTGLNHPFNMQSYSFLKNKFISTIPI-PYDAVGI 133 (331)
T ss_dssp EEEEEECSSS-------SCEEEEEEECSSCCCCEEECTTS-SEEEECCCSSSSCEEEEEETTTTEEEEEEEC-CTTEEEE
T ss_pred eEEEEECCCC-------ceeEEecccCCCCccceEECCCC-CEEEEecCCCCcccEEEEECCCCCeEEEEEC-CCCccce
Confidence 6999999887 33 45556566666569999998 6777555543 899999999998888774 4557999
Q ss_pred EEcCCCCEEEEE-eCCCe-EEEEeCCCCceEE----EeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCC
Q psy14130 226 SFNRDGSRLVTT-CKDKT-VRVLDPRTGLVIS----QGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLN 299 (494)
Q Consensus 226 ~~~~~~~~l~s~-~~d~~-v~iwd~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~ 299 (494)
+|+|+|++|+++ ..++. |.+|++.....+. ..... +..+..++|+|++..+++++ ..++.|++||+.+..
T Consensus 134 ~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~---~~~~~v~v~d~~~~~ 209 (331)
T 3u4y_A 134 AISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISG-GTRPFNITFTPDGNFAFVAN---LIGNSIGILETQNPE 209 (331)
T ss_dssp EECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECS-SSSEEEEEECTTSSEEEEEE---TTTTEEEEEECSSTT
T ss_pred EECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccC-CCCccceEECCCCCEEEEEe---CCCCeEEEEECCCCc
Confidence 999999855554 55578 9999988644321 11122 22378899999977788888 678999999998765
Q ss_pred CceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCc--eEEecccc-cCC---CCeeEEEEecCCceeee
Q psy14130 300 TPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERP--YIHFLNQS-LSG---APQRGLGFMPKRGCDVT 373 (494)
Q Consensus 300 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~--~~~~~~~~-~~~---~~v~~~~~~p~~~~~~~ 373 (494)
.......+.....+..++|+|||++++++...++.|.+||+.+++. +..+.... ... ....+++|+|++..++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v 289 (331)
T 3u4y_A 210 NITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFI 289 (331)
T ss_dssp SCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEE
T ss_pred ccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEE
Confidence 5222333445567788999999999978877889999999998865 22221110 011 12256899999986643
Q ss_pred -c--cceeEEEEeeC
Q psy14130 374 -Q--CEIFRFFKLHT 385 (494)
Q Consensus 374 -~--~~~~~~~~l~~ 385 (494)
. ++.+++|++..
T Consensus 290 ~~~~~~~v~v~d~~~ 304 (331)
T 3u4y_A 290 SANISRELKVFTISG 304 (331)
T ss_dssp EETTTTEEEEEETTS
T ss_pred ecCCCCcEEEEEecC
Confidence 2 56899999876
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=5.9e-20 Score=175.92 Aligned_cols=205 Identities=15% Similarity=0.104 Sum_probs=157.9
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccc---------cEEEEEEcCCCCCEEEEEe--CCCeEEEEECCCCeEEEEecC
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKR---------RVGYIEWHPTAENVVASAG--FDYLIILWDVGKGEALTVIDC 217 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~---------~V~~~~~~p~~~~~l~s~s--~d~~v~iwd~~~~~~~~~~~~ 217 (494)
+.|.+||..++ +.+..+..+.. .+.+++|+|++. .++.++ .++.|.+||+.+++.+..+..
T Consensus 111 ~~v~~~d~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~~~i~~~d~~~~~~~~~~~~ 182 (353)
T 3vgz_A 111 SAVTAIDAKTG-------EVKGRLVLDDRKRTEEVRPLQPRELVADDATN-TVYISGIGKESVIWVVDGGNIKLKTAIQN 182 (353)
T ss_dssp TEEEEEETTTC-------CEEEEEESCCCCCCSSCCCCEEEEEEEETTTT-EEEEEEESSSCEEEEEETTTTEEEEEECC
T ss_pred CEEEEEeCCCC-------eeEEEEecCCCccccccCCCCCceEEECCCCC-EEEEEecCCCceEEEEcCCCCceEEEecC
Confidence 36999999887 33344433322 278999999984 555544 578999999999999888886
Q ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeee----cCCCCceEEEEECCCCeEEEEEecCCCCceEEEE
Q psy14130 218 HPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVC----HPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLW 293 (494)
Q Consensus 218 h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iw 293 (494)
+...+.+++|+|+|++|++++.++.|.+||+.+++.+..+.. +... +..++|+|+++.+++++ ..++.|.+|
T Consensus 183 ~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~---~~~~~v~~~ 258 (353)
T 3vgz_A 183 TGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHF-FINISLDTARQRAFITD---SKAAEVLVV 258 (353)
T ss_dssp CCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCC-EEEEEEETTTTEEEEEE---SSSSEEEEE
T ss_pred CCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcc-cceEEECCCCCEEEEEe---CCCCEEEEE
Confidence 667789999999999999999999999999999998877764 2223 66799999988888887 567999999
Q ss_pred eCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeee
Q psy14130 294 DENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVT 373 (494)
Q Consensus 294 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~ 373 (494)
|+.+........ ... ...++|+|+++.++++...++.|.+||..+++....+ .....+.+++|+|++..+..
T Consensus 259 d~~~~~~~~~~~---~~~-~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~----~~~~~~~~~~~s~dg~~l~v 330 (353)
T 3vgz_A 259 DTRNGNILAKVA---APE-SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTF----DTPTHPNSLALSADGKTLYV 330 (353)
T ss_dssp ETTTCCEEEEEE---CSS-CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEE----ECCSEEEEEEECTTSCEEEE
T ss_pred ECCCCcEEEEEE---cCC-CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEE----ecCCCCCeEEEcCCCCEEEE
Confidence 998755432222 222 3568999999998888888999999999988764332 23456899999999985443
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.1e-19 Score=192.06 Aligned_cols=217 Identities=10% Similarity=0.043 Sum_probs=152.8
Q ss_pred CCcEEEEEEcCcEEEEEcCCCCCCCCcccceEeccccccc----------------EEEEEEcCCCCCEEEEEeCCC---
Q psy14130 139 GGGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRR----------------VGYIEWHPTAENVVASAGFDY--- 199 (494)
Q Consensus 139 ~~g~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~----------------V~~~~~~p~~~~~l~s~s~d~--- 199 (494)
+|..++....+.|.+||+.++ +.......+... +.+++|+|+| +.|++++.|+
T Consensus 162 DG~~la~~~~~~i~~~d~~~g-------~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg-~~l~~~~~d~~~~ 233 (741)
T 2ecf_A 162 KGGFVSFIRGRNLWVIDLASG-------RQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDD-SAIAYARIDESPV 233 (741)
T ss_dssp TSSEEEEEETTEEEEEETTTT-------EEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTS-SCEEEEEEECTTS
T ss_pred CCCEEEEEeCCcEEEEecCCC-------CEEEeccCCccceeccccceeeeeccccccceEECCCC-CEEEEEEEcCCCC
Confidence 344455555668999999876 332222223322 4789999999 5777777665
Q ss_pred ------------------------------eEEEEECCC-CeEEEEec--CCCCceEEEEEcCCCCEEEEEeC-----CC
Q psy14130 200 ------------------------------LIILWDVGK-GEALTVID--CHPDVINCLSFNRDGSRLVTTCK-----DK 241 (494)
Q Consensus 200 ------------------------------~v~iwd~~~-~~~~~~~~--~h~~~v~~l~~~~~~~~l~s~~~-----d~ 241 (494)
.|.+||+.+ ++...... .|...+.+++| |||+.|++++. +.
T Consensus 234 ~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~ 312 (741)
T 2ecf_A 234 PVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKL 312 (741)
T ss_dssp CEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEE
T ss_pred ceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeE
Confidence 889999988 77554433 47788999999 99999997764 57
Q ss_pred eEEEEeCCCCceEEEeeecCCC---CceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEe-E
Q psy14130 242 TVRVLDPRTGLVISQGVCHPGT---RSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFP-Y 317 (494)
Q Consensus 242 ~v~iwd~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~-~ 317 (494)
.|++||+.+++....+..+... .+..+.|+|++. +++++ +.++.++||.+...... .....+...+..+ .
T Consensus 313 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~---~~~g~~~l~~~~~~~~~--~~l~~~~~~v~~~~~ 386 (741)
T 2ecf_A 313 DLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGS-ILWSS---ERTGFQHLYRIDSKGKA--AALTHGNWSVDELLA 386 (741)
T ss_dssp EEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSC-EEEEE---CTTSSCEEEEECSSSCE--EESCCSSSCEEEEEE
T ss_pred EEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCe-EEEEe---cCCCccEEEEEcCCCCe--eeeeecceEEEeEeE
Confidence 8999999999977777666532 145789999965 77777 67887788776522221 2222344567676 5
Q ss_pred EeCCCCEEEEEEeCCC--cEEEEEeeC-CCceEEecccccCCCCeeEEEEecCCceeeec
Q psy14130 318 YDHDTRILFLAGKGDG--NIRYYELTN-ERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ 374 (494)
Q Consensus 318 ~~~~~~~l~~~g~~dg--~i~~wd~~~-~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~ 374 (494)
|+|+++.|+++++.|+ .+++|++.. ++.. ..+.. ...+..++|+|++..++..
T Consensus 387 ~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~-~~l~~---~~~~~~~~~spdg~~l~~~ 442 (741)
T 2ecf_A 387 VDEKAGLAYFRAGIESARESQIYAVPLQGGQP-QRLSK---APGMHSASFARNASVYVDS 442 (741)
T ss_dssp EETTTTEEEEEECSSCTTCBEEEEEETTCCCC-EECCC---SCSEEEEEECTTSSEEEEE
T ss_pred EeCCCCEEEEEEeCCCCceEEEEEEEcCCCCe-eeccc---CCCceEEEECCCCCEEEEE
Confidence 9999999977777777 899999985 4432 22322 4568899999999877764
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=99.87 E-value=2.4e-19 Score=170.79 Aligned_cols=211 Identities=12% Similarity=0.084 Sum_probs=140.4
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEe-CCCeEEEEECCC-CeEEE----EecC-CCCc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAG-FDYLIILWDVGK-GEALT----VIDC-HPDV 221 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s-~d~~v~iwd~~~-~~~~~----~~~~-h~~~ 221 (494)
+.|.+||+.++.. ......+..+ ..+.+++|+|++ +.|++++ .++.|.+||+.+ ++... .+.. ....
T Consensus 106 ~~i~~~d~~~~~~----~~~~~~~~~~-~~~~~~~~s~dg-~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~ 179 (343)
T 1ri6_A 106 GNVSVTRLEDGLP----VGVVDVVEGL-DGCHSANISPDN-RTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAG 179 (343)
T ss_dssp TEEEEEEEETTEE----EEEEEEECCC-TTBCCCEECTTS-SEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCC
T ss_pred CeEEEEECCCCcc----ccccccccCC-CCceEEEECCCC-CEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCC
Confidence 3699999952211 1333344433 458899999998 5666665 899999999987 54332 2232 3457
Q ss_pred eEEEEEcCCCCEEEEEe-CCCeEEEEeCCC--Cce--EEEeeec----C-CCCceEEEEECCCCeEEEEEecCCCCceEE
Q psy14130 222 INCLSFNRDGSRLVTTC-KDKTVRVLDPRT--GLV--ISQGVCH----P-GTRSSKAVFIGDTGRIVTTGFSRHSDRQVG 291 (494)
Q Consensus 222 v~~l~~~~~~~~l~s~~-~d~~v~iwd~~~--~~~--~~~~~~~----~-~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~ 291 (494)
+.+++|+|+|++++.++ .++.|.+||+.. ++. ....... . ...+..++|+|++..+++++ ..++.|.
T Consensus 180 ~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~---~~~~~i~ 256 (343)
T 1ri6_A 180 PRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACD---RTASLIT 256 (343)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEE---TTTTEEE
T ss_pred cceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEe---cCCCEEE
Confidence 88999999999776555 789999999953 442 2222211 1 11255799999977787777 6799999
Q ss_pred EEeCCCC-CCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCC
Q psy14130 292 LWDENDL-NTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKR 368 (494)
Q Consensus 292 iwd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~ 368 (494)
+||+... ..............+..++|+|++++|++++..++.|.+|++.........+.....+....+++|.|+.
T Consensus 257 v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~g~~p~~i~~~~~~ 334 (343)
T 1ri6_A 257 VFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAHE 334 (343)
T ss_dssp EEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECSSSCCEEEEEEEC
T ss_pred EEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccccccCCCCeeEEEEccc
Confidence 9999731 1222233333344588899999999997776689999999776432112333344444567788888754
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=2.2e-19 Score=181.58 Aligned_cols=221 Identities=11% Similarity=0.051 Sum_probs=174.1
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEEC--CCCeEEEEecCCCCceEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDV--GKGEALTVIDCHPDVINCLS 226 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~--~~~~~~~~~~~h~~~v~~l~ 226 (494)
++|.+||..++ +.+.++..+.. +.+++|+|+| ++|++++.|++|++||+ .+++.+.++. +...+.+++
T Consensus 159 ~~V~v~D~~t~-------~~~~~i~~g~~-~~~v~~spdg-~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~va 228 (543)
T 1nir_A 159 GQIALVDGDSK-------KIVKVIDTGYA-VHISRMSASG-RYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIEARSVE 228 (543)
T ss_dssp TEEEEEETTTC-------CEEEEEECSTT-EEEEEECTTS-CEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSEEEEEE
T ss_pred CeEEEEECCCc-------eEEEEEecCcc-cceEEECCCC-CEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCCcceEE
Confidence 36999999988 55666663323 8899999998 79999999999999999 8899888888 556789999
Q ss_pred EcC----CCCEEEEEe-CCCeEEEEeCCCCceEEEeee----------cCCCCceEEEEECCCCeEEEEEecCCCCceEE
Q psy14130 227 FNR----DGSRLVTTC-KDKTVRVLDPRTGLVISQGVC----------HPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVG 291 (494)
Q Consensus 227 ~~~----~~~~l~s~~-~d~~v~iwd~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~ 291 (494)
|+| ||++|++++ .+++|.+||..+++++..+.. |....+..+.++++++.++++. ..++.|.
T Consensus 229 ~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~---~~~g~i~ 305 (543)
T 1nir_A 229 SSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNV---KETGKVL 305 (543)
T ss_dssp ECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEE---TTTTEEE
T ss_pred eCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEE---CCCCeEE
Confidence 999 999999988 489999999999998888765 3343578899999888888888 7899999
Q ss_pred EEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEeccc-ccCCCCeeEEE-EecC-C
Q psy14130 292 LWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQ-SLSGAPQRGLG-FMPK-R 368 (494)
Q Consensus 292 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~-~~~~~~v~~~~-~~p~-~ 368 (494)
+||+.+..... ...+.+...+..+.|+|+++++++++..+++|.+||+.+++....+-.. ..+.. +++. ++|+ +
T Consensus 306 vvd~~~~~~l~-~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g--~g~~~~~p~~g 382 (543)
T 1nir_A 306 LVNYKDIDNLT-VTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPG--RGANFVHPKYG 382 (543)
T ss_dssp EEECTTSSSCE-EEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCT--TCEEEEETTTE
T ss_pred EEEecCCCcce-eEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCC--CCcccCCCCCc
Confidence 99998755433 2334455678889999999999788888999999999999864433211 11222 2333 4687 6
Q ss_pred ceeeec---cceeEEEEeeC
Q psy14130 369 GCDVTQ---CEIFRFFKLHT 385 (494)
Q Consensus 369 ~~~~~~---~~~~~~~~l~~ 385 (494)
.+++++ ++.+++|++.+
T Consensus 383 ~~~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 383 PVWSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp EEEEEEBSSSSEEEEEECCT
T ss_pred cEEEeccCCCceEEEEEeCC
Confidence 666663 68999999876
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.1e-19 Score=178.29 Aligned_cols=197 Identities=11% Similarity=0.062 Sum_probs=145.5
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEE-EEeCCCe--EEEEECCCCeEEEEecCCCCceEEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVA-SAGFDYL--IILWDVGKGEALTVIDCHPDVINCLS 226 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~-s~s~d~~--v~iwd~~~~~~~~~~~~h~~~v~~l~ 226 (494)
.|++||+.++ +. ..+..|...+.+++|+|+| +.|+ +++.|+. |++||+.+++. ..+..|...+.+++
T Consensus 204 ~i~~~d~~tg-------~~-~~l~~~~~~~~~~~~spdg-~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~ 273 (415)
T 2hqs_A 204 ALVIQTLANG-------AV-RQVASFPRHNGAPAFSPDG-SKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPT 273 (415)
T ss_dssp EEEEEETTTC-------CE-EEEECCSSCEEEEEECTTS-SEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEE
T ss_pred EEEEEECCCC-------cE-EEeecCCCcccCEEEcCCC-CEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceE
Confidence 6999999887 33 3466788899999999999 4555 7777664 99999988775 56777889999999
Q ss_pred EcCCCCEEEEEeC-CC--eEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCcee
Q psy14130 227 FNRDGSRLVTTCK-DK--TVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLA 303 (494)
Q Consensus 227 ~~~~~~~l~s~~~-d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~ 303 (494)
|+|||+.|++++. ++ .|.+||+.+++. ..+..+... +..+.|+|++..+++++. ...+..|++||+.+... ..
T Consensus 274 ~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~-~~~~~~spdG~~l~~~~~-~~g~~~i~~~d~~~~~~-~~ 349 (415)
T 2hqs_A 274 WFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQ-NQDADVSSDGKFMVMVSS-NGGQQHIAKQDLATGGV-QV 349 (415)
T ss_dssp ECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSE-EEEEEECTTSSEEEEEEE-CSSCEEEEEEETTTCCE-EE
T ss_pred ECCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEecCCCc-ccCeEECCCCCEEEEEEC-cCCceEEEEEECCCCCE-EE
Confidence 9999999998886 44 688889988774 344445444 778999999776766661 11146899999987543 21
Q ss_pred EeeecCCCceEEeEEeCCCCEEEEEEeCCC---cEEEEEeeCCCceEEecccccCCCCeeEEEEecCC
Q psy14130 304 LETVDSSSGVLFPYYDHDTRILFLAGKGDG---NIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKR 368 (494)
Q Consensus 304 ~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg---~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~ 368 (494)
+.....+..++|+|+|+.| ++++.|+ .|++||+..+. ...+.. +...|++++|+|.-
T Consensus 350 ---l~~~~~~~~~~~spdg~~l-~~~s~~~~~~~l~~~d~~g~~--~~~l~~--~~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 350 ---LSSTFLDETPSLAPNGTMV-IYSSSQGMGSVLNLVSTDGRF--KARLPA--TDGQVKFPAWSPYL 409 (415)
T ss_dssp ---CCCSSSCEEEEECTTSSEE-EEEEEETTEEEEEEEETTSCC--EEECCC--SSSEEEEEEECCCC
T ss_pred ---ecCCCCcCCeEEcCCCCEE-EEEEcCCCccEEEEEECCCCc--EEEeeC--CCCCCcCCcccccc
Confidence 2222478899999999999 4454555 79999987554 233332 35679999999974
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.3e-19 Score=170.35 Aligned_cols=223 Identities=12% Similarity=0.036 Sum_probs=166.7
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeE-EEEecCCCCceEEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEA-LTVIDCHPDVINCLSF 227 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~-~~~~~~h~~~v~~l~~ 227 (494)
+.|.+||+.++ +....+..+...+ +++|+|++..+++++..++.|.+||+.+++. ...+..+..+..+++|
T Consensus 20 ~~v~~~d~~~~-------~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 91 (331)
T 3u4y_A 20 RRISFFSTDTL-------EILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDI 91 (331)
T ss_dssp TEEEEEETTTC-------CEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEE
T ss_pred CeEEEEeCccc-------ceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEE
Confidence 36999999988 4444555556667 9999999843455555589999999999887 7777766666666999
Q ss_pred cCCCCEEEEEeCCC---eEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCce-EEEEeCCCCCCcee
Q psy14130 228 NRDGSRLVTTCKDK---TVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQ-VGLWDENDLNTPLA 303 (494)
Q Consensus 228 ~~~~~~l~s~~~d~---~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~-i~iwd~~~~~~~~~ 303 (494)
+|+|++|+++..++ .|.+||+.+++.+..+..+.. ...++|+|++..+++++ ..++. |.+|++........
T Consensus 92 s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~--~~~~~~spdg~~l~~~~---~~~~~~i~~~~~~~~g~~~~ 166 (331)
T 3u4y_A 92 TPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYD--AVGIAISPNGNGLILID---RSSANTVRRFKIDADGVLFD 166 (331)
T ss_dssp CTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTT--EEEEEECTTSSCEEEEE---ETTTTEEEEEEECTTCCEEE
T ss_pred CCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCC--ccceEECCCCCEEEEEe---cCCCceEEEEEECCCCcEee
Confidence 99999999555553 899999999998887765443 68999999987788887 46677 99999875433221
Q ss_pred --EeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCcee-eec--ccee
Q psy14130 304 --LETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCD-VTQ--CEIF 378 (494)
Q Consensus 304 --~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~-~~~--~~~~ 378 (494)
.........+..++|+|+|+++++++..++.|++||+.+++.. ..+........+.+++|+|++..+ ++. ++.+
T Consensus 167 ~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~-~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i 245 (331)
T 3u4y_A 167 TGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENI-TLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDV 245 (331)
T ss_dssp EEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSC-EEEEEEECSSCCCCEEECTTSSEEEEECSSEEEE
T ss_pred cCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCccc-ceeeeccCCCCCceEEECCCCCEEEEEEcCCCEE
Confidence 1222344568899999999998888888999999999988761 111222234667899999999854 332 6678
Q ss_pred EEEEeeC
Q psy14130 379 RFFKLHT 385 (494)
Q Consensus 379 ~~~~l~~ 385 (494)
.+|++.+
T Consensus 246 ~~~d~~~ 252 (331)
T 3u4y_A 246 FNFNQLS 252 (331)
T ss_dssp EEEETTT
T ss_pred EEEECCC
Confidence 8888776
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.4e-18 Score=166.11 Aligned_cols=236 Identities=14% Similarity=0.181 Sum_probs=162.8
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEe-CCCeEEEEECCC-C--eEEEEecC-------
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAG-FDYLIILWDVGK-G--EALTVIDC------- 217 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s-~d~~v~iwd~~~-~--~~~~~~~~------- 217 (494)
+.|.+|++.++.. +.+..+..+...+..++|+|+| ++|++++ .++.|.+||+.. + +.+..+..
T Consensus 63 ~~v~~~~~~~g~~-----~~~~~~~~~~~~p~~~a~spdg-~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~ 136 (347)
T 3hfq_A 63 GGIAAWQIDGQTA-----HKLNTVVAPGTPPAYVAVDEAR-QLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRP 136 (347)
T ss_dssp EEEEEEEEETTEE-----EEEEEEEEESCCCSEEEEETTT-TEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSST
T ss_pred ceEEEEEecCCcE-----EEeeeeecCCCCCEEEEECCCC-CEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCc
Confidence 4799999976532 2344555677888999999999 5666666 789999999963 2 33333332
Q ss_pred --CCCceEEEEEcCCCCEEEEEeCCCeEEEEeCC-CCceE--EEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEE
Q psy14130 218 --HPDVINCLSFNRDGSRLVTTCKDKTVRVLDPR-TGLVI--SQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGL 292 (494)
Q Consensus 218 --h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~i 292 (494)
+...+.+++|+|+|+++++...++.|++||+. +++.. ..+..+.+..+..++|+|++..+++++ ..++.|.+
T Consensus 137 ~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~---~~~~~v~v 213 (347)
T 3hfq_A 137 EQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAG---ELSSQIAS 213 (347)
T ss_dssp TCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEE---TTTTEEEE
T ss_pred cccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEe---CCCCEEEE
Confidence 12348899999999966666678999999998 55532 223344443477899999977788887 68899999
Q ss_pred EeCCCCCCce-eEeee---cC----CCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEeccccc-CCCCeeEEE
Q psy14130 293 WDENDLNTPL-ALETV---DS----SSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSL-SGAPQRGLG 363 (494)
Q Consensus 293 wd~~~~~~~~-~~~~~---~~----~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~-~~~~v~~~~ 363 (494)
|++....... ..... .. ...+..++|+|||++|++++..++.|.+|++..... ...+.... ....+.+++
T Consensus 214 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~-~~~~~~~~~~~~~~~~~~ 292 (347)
T 3hfq_A 214 LKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGH-LTLIQQISTEGDFPRDFD 292 (347)
T ss_dssp EEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGC-EEEEEEEECSSSCCCEEE
T ss_pred EEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCc-EEEeEEEecCCCCcCeEE
Confidence 9987421111 11111 11 145788999999999988888899999999974321 22222222 244588999
Q ss_pred EecCCceeeec---cceeEEEEeeCCCCeEEEeE
Q psy14130 364 FMPKRGCDVTQ---CEIFRFFKLHTTRNMCEPIS 394 (494)
Q Consensus 364 ~~p~~~~~~~~---~~~~~~~~l~~~~~~~~~~~ 394 (494)
|+|++..++.. ++.+.+|++......+..+.
T Consensus 293 ~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~~~ 326 (347)
T 3hfq_A 293 LDPTEAFVVVVNQNTDNATLYARDLTSGKLSLLQ 326 (347)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEE
T ss_pred ECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEecc
Confidence 99999865543 57899998875334555554
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.85 E-value=1.8e-19 Score=177.34 Aligned_cols=189 Identities=13% Similarity=0.101 Sum_probs=134.9
Q ss_pred CcEEEEEcCCC-----CCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceE
Q psy14130 149 HRVKLWYIPDG-----GLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVIN 223 (494)
Q Consensus 149 ~~v~iw~~~~~-----~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~ 223 (494)
+.|+|||+.+. ..... ......+.+|...|.+++|+|+..++|++++.||+|++||++++..+....+|...|+
T Consensus 118 ~~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~ 196 (434)
T 2oit_A 118 SIIAFFDVRTFSNEAKQQKRP-FAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVT 196 (434)
T ss_dssp EEEEEEEHHHHHCTTCSSCCC-SEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEE
T ss_pred ceEEEEEccccccCCcCCcce-eeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCcee
Confidence 36999998654 11000 1234567789999999999998548999999999999999999887777778999999
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCC------CCceEEEEECCCCeEEEEEecCCCC------ceEE
Q psy14130 224 CLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPG------TRSSKAVFIGDTGRIVTTGFSRHSD------RQVG 291 (494)
Q Consensus 224 ~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~~g~~~~~d------~~i~ 291 (494)
+++|+|+|++|++|+.||+|++||++ ++....+..|.. ..+..+.|+++...+++.+ ..+ ..++
T Consensus 197 ~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~---~~dg~~~~~~~v~ 272 (434)
T 2oit_A 197 SVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYA---AADGTLETSPDVV 272 (434)
T ss_dssp EEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEE---ETTCCSSSCCEEE
T ss_pred EEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEc---cCCCccCCCCceE
Confidence 99999999999999999999999999 666666655432 1478899998744343333 233 2499
Q ss_pred EEeCCCCCC--ceeEeee-cC-------CCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeC
Q psy14130 292 LWDENDLNT--PLALETV-DS-------SSGVLFPYYDHDTRILFLAGKGDGNIRYYELTN 342 (494)
Q Consensus 292 iwd~~~~~~--~~~~~~~-~~-------~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~ 342 (494)
+||+++... +...... +. ......+.+-++.+.++++.+..+.|.+.....
T Consensus 273 i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~vl~~~~ 333 (434)
T 2oit_A 273 MALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILARQS 333 (434)
T ss_dssp EEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEEEEECT
T ss_pred EEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCceeEEEecC
Confidence 999986432 2222211 11 111223344478888888877777788877543
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=99.83 E-value=2e-17 Score=159.10 Aligned_cols=211 Identities=11% Similarity=0.075 Sum_probs=137.3
Q ss_pred CcEEEEEcCCCCCCCCcccceEec--------ccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe-------E--
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDL--------HGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE-------A-- 211 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~--------~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~-------~-- 211 (494)
+.|.+|++...+........ ... ..+...+.+++|+|+|..+++++..++.|.+|++.... .
T Consensus 120 ~~v~~~~~~~~g~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~ 198 (361)
T 3scy_A 120 GSITVFPIGQDGALLPASDV-IEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLT 198 (361)
T ss_dssp TEEEEEEBCTTSCBCSCSEE-EECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEE
T ss_pred CEEEEEEeCCCCcCccccee-EEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceee
Confidence 36999999765433222111 111 11234468899999994355555568999999987533 1
Q ss_pred ----EEEecCCCCceEEEEEcCCCCEEEEEe-CCCeEEEEeCCCCce--EEEeeecCC--CCceEEEEECCCCeEEEEEe
Q psy14130 212 ----LTVIDCHPDVINCLSFNRDGSRLVTTC-KDKTVRVLDPRTGLV--ISQGVCHPG--TRSSKAVFIGDTGRIVTTGF 282 (494)
Q Consensus 212 ----~~~~~~h~~~v~~l~~~~~~~~l~s~~-~d~~v~iwd~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~l~~~g~ 282 (494)
......+...+.+++|+|+|+++++++ .++.|.+||+.+++. +..+..... .....++|+|++..++++.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~- 277 (361)
T 3scy_A 199 KGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASN- 277 (361)
T ss_dssp EEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEE-
T ss_pred cccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEEC-
Confidence 112223456788999999999888777 689999999987764 233322211 2256899999977777777
Q ss_pred cCCC-CceEEEEeCCCC-CCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEee--CCCceEEecccccCCCC
Q psy14130 283 SRHS-DRQVGLWDENDL-NTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELT--NERPYIHFLNQSLSGAP 358 (494)
Q Consensus 283 ~~~~-d~~i~iwd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~--~~~~~~~~~~~~~~~~~ 358 (494)
.. ++.|.+|++... ..............+..++|+|||++|++++..++.|.+|++. +++ ...+........
T Consensus 278 --~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~--~~~~~~~~~~~~ 353 (361)
T 3scy_A 278 --RLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGL--LTDIKKDIKVDK 353 (361)
T ss_dssp --CSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCC--EEECSCCEECSS
T ss_pred --CCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCc--EeecceeeeCCC
Confidence 45 689999998621 2222233333345678899999999997777688999998765 444 333332222345
Q ss_pred eeEEEEe
Q psy14130 359 QRGLGFM 365 (494)
Q Consensus 359 v~~~~~~ 365 (494)
+.+++|.
T Consensus 354 p~~v~~~ 360 (361)
T 3scy_A 354 PVCLKFV 360 (361)
T ss_dssp EEEEEEE
T ss_pred CeEEEEc
Confidence 7888886
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.83 E-value=2e-18 Score=181.86 Aligned_cols=219 Identities=10% Similarity=0.036 Sum_probs=146.1
Q ss_pred EEEEEEcCcEEEEEcCCCCCCCCcccceEecccccc------------------cEEEEEEcCCCCCEEEEEeCCC----
Q psy14130 142 AFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKR------------------RVGYIEWHPTAENVVASAGFDY---- 199 (494)
Q Consensus 142 ~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~------------------~V~~~~~~p~~~~~l~s~s~d~---- 199 (494)
.++....++|.+|++.++. .......+.. .+.+++|+|+| +.|++++.|+
T Consensus 127 ~la~~~~~~i~~~~~~~g~-------~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg-~~la~~~~~~~~~~ 198 (723)
T 1xfd_A 127 QLIFIFENNIYYCAHVGKQ-------AIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDG-TRLAYAAINDSRVP 198 (723)
T ss_dssp CEEEEETTEEEEESSSSSC-------CEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTS-SEEEEEEEECTTSC
T ss_pred EEEEEECCeEEEEECCCCc-------eEEEecCCCCCceECcccceeEEEEeccCcceEEECCCC-CEEEEEEECCCccc
Confidence 3333444579999998873 3333333332 23789999999 6888877543
Q ss_pred ------------------------------eEEEEECCCCeEEEEecCC------CCceEEEEEcCCCCEEEEEeC----
Q psy14130 200 ------------------------------LIILWDVGKGEALTVIDCH------PDVINCLSFNRDGSRLVTTCK---- 239 (494)
Q Consensus 200 ------------------------------~v~iwd~~~~~~~~~~~~h------~~~v~~l~~~~~~~~l~s~~~---- 239 (494)
.|++||+.+++....+..+ ...+.+++|+|||++|++.+.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~ 278 (723)
T 1xfd_A 199 IMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQN 278 (723)
T ss_dssp EEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSC
T ss_pred eEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCC
Confidence 8999999988765666654 567899999999998877653
Q ss_pred CCeEEEEeCCCCceEEEeeecCCCCc----eEEEEECCCCeEEEE-EecCCCCc------eEEEEeC-CCCCC--ceeEe
Q psy14130 240 DKTVRVLDPRTGLVISQGVCHPGTRS----SKAVFIGDTGRIVTT-GFSRHSDR------QVGLWDE-NDLNT--PLALE 305 (494)
Q Consensus 240 d~~v~iwd~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~-g~~~~~d~------~i~iwd~-~~~~~--~~~~~ 305 (494)
+..|++||+.++++...+..+....+ ..+.|+|++..++.+ + ..++ .|.+||+ ..... ...+.
T Consensus 279 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~---~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~ 355 (723)
T 1xfd_A 279 VSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRA---IPQGGRGKFYHITVSSSQPNSSNDNIQSIT 355 (723)
T ss_dssp EEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEE---ECCSSSSCEEEEEEECSSCCSSSCCCCBSC
T ss_pred eEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEe---cccCCCcceeEEEEEeccCCCCccceeEee
Confidence 36799999999987666554332212 367999998877775 4 3555 5777773 33220 22221
Q ss_pred eecCCCceEE-eEEeCCCCEEEEEEeCC--CcEEEEEeeCCCc-eEEeccc-ccCCCCeeEEEEecCCceeee
Q psy14130 306 TVDSSSGVLF-PYYDHDTRILFLAGKGD--GNIRYYELTNERP-YIHFLNQ-SLSGAPQRGLGFMPKRGCDVT 373 (494)
Q Consensus 306 ~~~~~~~v~~-~~~~~~~~~l~~~g~~d--g~i~~wd~~~~~~-~~~~~~~-~~~~~~v~~~~~~p~~~~~~~ 373 (494)
.+...+.. ++|+|||+.|+.++..+ +.+++|++..... ....+.. ..+...+..++|+|++..++.
T Consensus 356 --~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~ 426 (723)
T 1xfd_A 356 --SGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLL 426 (723)
T ss_dssp --CSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEE
T ss_pred --cCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEE
Confidence 12334444 68999999996666666 8899999975421 1111221 113456889999999987765
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.7e-18 Score=160.93 Aligned_cols=216 Identities=11% Similarity=0.054 Sum_probs=157.6
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCC-CeEEEEecCC-CCceEEEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGK-GEALTVIDCH-PDVINCLSF 227 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~-~~~~~~~~~h-~~~v~~l~~ 227 (494)
+|++||+.++ +. ..+..|...|.+++|+|++ ++|++++ ++.|++||+.+ ++.......+ ...+.+++|
T Consensus 23 ~i~~~d~~~~-------~~-~~~~~~~~~v~~~~~spdg-~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 92 (297)
T 2ojh_A 23 SIEIFNIRTR-------KM-RVVWQTPELFEAPNWSPDG-KYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGI 92 (297)
T ss_dssp EEEEEETTTT-------EE-EEEEEESSCCEEEEECTTS-SEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEE
T ss_pred eEEEEeCCCC-------ce-eeeccCCcceEeeEECCCC-CEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEE
Confidence 6999999876 33 3455689999999999998 6888877 78999999998 8777666555 478899999
Q ss_pred cCCCCEEEEEeC--C--CeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCcee
Q psy14130 228 NRDGSRLVTTCK--D--KTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLA 303 (494)
Q Consensus 228 ~~~~~~l~s~~~--d--~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~ 303 (494)
+|+|++|++++. + ..|..||+.+++ ...+..+. . +..+.|+|++..++.++ ..++.++||++.......
T Consensus 93 spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~-~-~~~~~~spdg~~l~~~~---~~~~~~~l~~~~~~~~~~- 165 (297)
T 2ojh_A 93 SPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNL-P-SYWHGWSPDGKSFTYCG---IRDQVFDIYSMDIDSGVE- 165 (297)
T ss_dssp CTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSS-S-EEEEEECTTSSEEEEEE---EETTEEEEEEEETTTCCE-
T ss_pred CCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCC-C-ccceEECCCCCEEEEEE---CCCCceEEEEEECCCCcc-
Confidence 999999999993 3 445555555555 33444333 2 67889999977777666 578999999864322211
Q ss_pred EeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEee-CCCceEEecccccCCCCeeEEEEecCCceeeec--c-----
Q psy14130 304 LETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELT-NERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--C----- 375 (494)
Q Consensus 304 ~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~-~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~----- 375 (494)
.....+...+.++.|+|+++.|++++..|+.+++|++. .+... ..+.. +...+..++|+|++..++.. +
T Consensus 166 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~-~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~~~~ 242 (297)
T 2ojh_A 166 TRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSV-ERITD--SAYGDWFPHPSPSGDKVVFVSYDADVFD 242 (297)
T ss_dssp EECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCE-EECCC--CSEEEEEEEECTTSSEEEEEEEETTCCS
T ss_pred eEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCc-EEEec--CCcccCCeEECCCCCEEEEEEcCCCCCc
Confidence 22233556789999999999996666679999999998 34433 33332 23568899999999877664 2
Q ss_pred ------ceeEEEEeeC
Q psy14130 376 ------EIFRFFKLHT 385 (494)
Q Consensus 376 ------~~~~~~~l~~ 385 (494)
..+.+|++..
T Consensus 243 ~~~~~~~~l~~~d~~~ 258 (297)
T 2ojh_A 243 HPRDLDVRVQLMDMDG 258 (297)
T ss_dssp CCSSEEEEEEEEETTS
T ss_pred ccccCceEEEEEecCC
Confidence 3477888766
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=3.7e-18 Score=179.36 Aligned_cols=196 Identities=10% Similarity=0.130 Sum_probs=138.3
Q ss_pred EEEEEEcCCCCCEEEEEe---------------------------------CCCeEEEEECCCCeEEEEec--CCCCceE
Q psy14130 179 VGYIEWHPTAENVVASAG---------------------------------FDYLIILWDVGKGEALTVID--CHPDVIN 223 (494)
Q Consensus 179 V~~~~~~p~~~~~l~s~s---------------------------------~d~~v~iwd~~~~~~~~~~~--~h~~~v~ 223 (494)
+.+++|+|+| +.|++++ .+..|++||+.+++...... .|...+.
T Consensus 183 ~~~~~~SpDg-~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 261 (706)
T 2z3z_A 183 EKGTFWSPKG-SCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLT 261 (706)
T ss_dssp CCSEEECTTS-SEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEE
T ss_pred CceEEECCCC-CEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEe
Confidence 5899999999 6888887 45789999999887654442 4677899
Q ss_pred EEEEcCCCCEEEEEeCCC-----eEEEEeCCCCceEEEee-ecCCC---CceEEEEEC--CCCeEEEEEecCCCCceEEE
Q psy14130 224 CLSFNRDGSRLVTTCKDK-----TVRVLDPRTGLVISQGV-CHPGT---RSSKAVFIG--DTGRIVTTGFSRHSDRQVGL 292 (494)
Q Consensus 224 ~l~~~~~~~~l~s~~~d~-----~v~iwd~~~~~~~~~~~-~~~~~---~~~~~~~~~--~~~~l~~~g~~~~~d~~i~i 292 (494)
+++|+|||+.|++++.++ .|++||+.+++....+. .+... .+..+.|+| + +.+++++ ..++.++|
T Consensus 262 ~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~d-g~~l~~~---~~~g~~~l 337 (706)
T 2z3z_A 262 NLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSN-NQFIWQS---RRDGWNHL 337 (706)
T ss_dssp EEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCS-SEEEEEE---CTTSSCEE
T ss_pred eEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCC-CEEEEEE---ccCCccEE
Confidence 999999999999988776 99999999984333332 22211 135678999 7 5577777 67888999
Q ss_pred EeCCCCCCceeEeeecCCCceEE-eEEeCCCCEEEEEEeCCC----cEEEEEeeCCCceEEecccccCCCCeeEEEEecC
Q psy14130 293 WDENDLNTPLALETVDSSSGVLF-PYYDHDTRILFLAGKGDG----NIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPK 367 (494)
Q Consensus 293 wd~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~g~~dg----~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 367 (494)
|++........ ....+...+.. ++|+|+++.|++++..++ .|..||+.+++. ..+. +...+.+++|+|+
T Consensus 338 ~~~~~~~~~~~-~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~--~~l~---~~~~~~~~~~spd 411 (706)
T 2z3z_A 338 YLYDTTGRLIR-QVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKT--KDLT---PESGMHRTQLSPD 411 (706)
T ss_dssp EEEETTSCEEE-ECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCC--EESC---CSSSEEEEEECTT
T ss_pred EEEECCCCEEE-ecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCc--eecc---CCCceEEEEECCC
Confidence 98752122111 11223445655 799999999977777766 566666666552 2222 3456899999999
Q ss_pred Cceeeec--c----ceeEEEEeeC
Q psy14130 368 RGCDVTQ--C----EIFRFFKLHT 385 (494)
Q Consensus 368 ~~~~~~~--~----~~~~~~~l~~ 385 (494)
+..++.. + ..+.+|++..
T Consensus 412 g~~l~~~~~~~~~p~~i~l~d~~~ 435 (706)
T 2z3z_A 412 GSAIIDIFQSPTVPRKVTVTNIGK 435 (706)
T ss_dssp SSEEEEEEECSSCSCEEEEEESSS
T ss_pred CCEEEEEecCCCCCcEEEEEECCC
Confidence 9877653 2 4588998876
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.83 E-value=3.6e-19 Score=175.24 Aligned_cols=162 Identities=12% Similarity=0.107 Sum_probs=127.7
Q ss_pred ccccEEEEEEcCCCCCEEE----EEeCCCeEEEEECCCC--------e---EEEEecCCCCceEEEEEcCC-CCEEEEEe
Q psy14130 175 HKRRVGYIEWHPTAENVVA----SAGFDYLIILWDVGKG--------E---ALTVIDCHPDVINCLSFNRD-GSRLVTTC 238 (494)
Q Consensus 175 h~~~V~~~~~~p~~~~~l~----s~s~d~~v~iwd~~~~--------~---~~~~~~~h~~~v~~l~~~~~-~~~l~s~~ 238 (494)
|...|.+++|+|++ ++|+ +|+.|++|++||+.++ + .+..+.+|...|.+++|+|+ +.+|++++
T Consensus 91 ~~~~v~~l~~spdg-~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s 169 (434)
T 2oit_A 91 MKFPIHHLALSCDN-LTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCL 169 (434)
T ss_dssp CSSCEEEEEECTTS-CEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEE
T ss_pred CCCcccEEEEcCCC-CEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEE
Confidence 66789999999998 6888 8889999999998654 2 24556779999999999997 88999999
Q ss_pred CCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee-----cCCCce
Q psy14130 239 KDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV-----DSSSGV 313 (494)
Q Consensus 239 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~-----~~~~~v 313 (494)
.||+|++||++++..+.....|... +.+++|+|++. ++++| +.|+.|++||++ ......+... ++...+
T Consensus 170 ~Dg~v~iwD~~~~~~~~~~~~~~~~-v~~v~wspdg~-~lasg---s~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v 243 (434)
T 2oit_A 170 ADGSIAVLQVTETVKVCATLPSTVA-VTSVCWSPKGK-QLAVG---KQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRV 243 (434)
T ss_dssp TTSCEEEEEESSSEEEEEEECGGGC-EEEEEECTTSS-CEEEE---ETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEE
T ss_pred CCCeEEEEEcCCCcceeeccCCCCc-eeEEEEcCCCC-EEEEE---cCCCcEEEEccC-CcccccccCCcccCCCCceeE
Confidence 9999999999999777666777766 99999999954 55555 489999999998 2222111111 112378
Q ss_pred EEeEEeCCCCEEEEEEeCCCc------EEEEEeeCC
Q psy14130 314 LFPYYDHDTRILFLAGKGDGN------IRYYELTNE 343 (494)
Q Consensus 314 ~~~~~~~~~~~l~~~g~~dg~------i~~wd~~~~ 343 (494)
.++.|++++.++++.+..||. +++|+++..
T Consensus 244 ~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 244 LDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred EEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 999999998888666767654 899999865
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.83 E-value=8.8e-19 Score=179.84 Aligned_cols=185 Identities=11% Similarity=-0.008 Sum_probs=132.3
Q ss_pred EEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCC----CeEEEEeCCCCceE
Q psy14130 179 VGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKD----KTVRVLDPRTGLVI 254 (494)
Q Consensus 179 V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d----~~v~iwd~~~~~~~ 254 (494)
+...+|+|++..++++.+.++.+.+||+.+++.......+ . .+++|+|||++|++++.| +.|++||+.+++..
T Consensus 112 ~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~-~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~ 188 (582)
T 3o4h_A 112 MRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLP-G--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR 188 (582)
T ss_dssp BEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEES-S--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE
T ss_pred ceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCC-C--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce
Confidence 3356788887555555444555669999988766555433 3 889999999999988877 78999999988854
Q ss_pred EEeeecCCCCceEEEEECCCCeEEEEEecCCCCc--eEEEEeCCCCCCceeEeeecCCCceEEeE--------EeCCCCE
Q psy14130 255 SQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDR--QVGLWDENDLNTPLALETVDSSSGVLFPY--------YDHDTRI 324 (494)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~v~~~~--------~~~~~~~ 324 (494)
.+..|... +...+|+|++..++ ++ ..++ .|++||+.+.... ....+...+..+. |+||| .
T Consensus 189 -~l~~~~~~-~~~~~~SpDG~~l~-~~---~~~~~~~i~~~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~spdg-~ 258 (582)
T 3o4h_A 189 -VFDSGEGS-FSSASISPGMKVTA-GL---ETAREARLVTVDPRDGSVE---DLELPSKDFSSYRPTAITWLGYLPDG-R 258 (582)
T ss_dssp -EECCSSCE-EEEEEECTTSCEEE-EE---ECSSCEEEEEECTTTCCEE---ECCCSCSHHHHHCCSEEEEEEECTTS-C
T ss_pred -EeecCCCc-cccceECCCCCEEE-Ec---cCCCeeEEEEEcCCCCcEE---EccCCCcChhhhhhccccceeEcCCC-c
Confidence 56667665 78999999966666 44 4677 8999999875432 2223344555666 99999 5
Q ss_pred EEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec---cceeEEEEeeC
Q psy14130 325 LFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ---CEIFRFFKLHT 385 (494)
Q Consensus 325 l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~---~~~~~~~~l~~ 385 (494)
++++++.|+.+++|++ ++... .....+.+++|+ ++.++++. ....++|.+..
T Consensus 259 ~~~~~~~~g~~~l~~~--g~~~~------~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~ 313 (582)
T 3o4h_A 259 LAVVARREGRSAVFID--GERVE------APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPS 313 (582)
T ss_dssp EEEEEEETTEEEEEET--TEEEC------CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETT
T ss_pred EEEEEEcCCcEEEEEE--CCeec------cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcC
Confidence 5588999999999999 54321 123568899999 88877653 33355665554
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1e-17 Score=160.21 Aligned_cols=220 Identities=12% Similarity=0.008 Sum_probs=165.3
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCc------
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDV------ 221 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~------ 221 (494)
.+.|.+||..++ +.+..+. ....+.+++|+|++..+++++..++.|.+||+.+++.+..+..+...
T Consensus 68 ~~~v~~~d~~~~-------~~~~~~~-~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~ 139 (353)
T 3vgz_A 68 GGVVYRLDPVTL-------EVTQAIH-NDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVR 139 (353)
T ss_dssp SEEEEEECTTTC-------CEEEEEE-ESSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCC
T ss_pred CccEEEEcCCCC-------eEEEEEe-cCCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccC
Confidence 347999999887 4444443 23457789999998546677777899999999999988888754432
Q ss_pred ---eEEEEEcCCCCEEEEEe--CCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCC
Q psy14130 222 ---INCLSFNRDGSRLVTTC--KDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEN 296 (494)
Q Consensus 222 ---v~~l~~~~~~~~l~s~~--~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~ 296 (494)
+.+++|+|+|+++++++ .++.|.+||+.+++.+..+..+... +..+.|+|+++.++++. .++.|.+||+.
T Consensus 140 ~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~----~~~~i~~~d~~ 214 (353)
T 3vgz_A 140 PLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKM-STGLALDSEGKRLYTTN----ADGELITIDTA 214 (353)
T ss_dssp CCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTT-CCCCEEETTTTEEEEEC----TTSEEEEEETT
T ss_pred CCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCc-cceEEECCCCCEEEEEc----CCCeEEEEECC
Confidence 78999999999888776 4789999999999988887744443 68889999977666665 68999999998
Q ss_pred CCCCceeEeee--cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCce-eee
Q psy14130 297 DLNTPLALETV--DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGC-DVT 373 (494)
Q Consensus 297 ~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~-~~~ 373 (494)
+.......... .+...+..++|+|+++.++++...++.|.+||+.+++....... .. ..+++|+|++.. +++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~----~~-~~~~~~s~dg~~l~v~ 289 (353)
T 3vgz_A 215 DNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAA----PE-SLAVLFNPARNEAYVT 289 (353)
T ss_dssp TTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEEC----SS-CCCEEEETTTTEEEEE
T ss_pred CCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEc----CC-CceEEECCCCCEEEEE
Confidence 75433222211 12345677999999999988887789999999999886443321 22 367999999984 444
Q ss_pred c--cceeEEEEeeC
Q psy14130 374 Q--CEIFRFFKLHT 385 (494)
Q Consensus 374 ~--~~~~~~~~l~~ 385 (494)
. ++.+.+|++.+
T Consensus 290 ~~~~~~v~~~d~~~ 303 (353)
T 3vgz_A 290 HRQAGKVSVIDAKS 303 (353)
T ss_dssp ETTTTEEEEEETTT
T ss_pred ECCCCeEEEEECCC
Confidence 3 78899999876
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=99.82 E-value=4.4e-18 Score=161.50 Aligned_cols=212 Identities=12% Similarity=0.058 Sum_probs=155.1
Q ss_pred cEEEEEcCCCCCCCCcccceEeccc-----ccccEEEEEEcCCCCCEEEEEe------------CCCeEEEEECCCCeEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHG-----HKRRVGYIEWHPTAENVVASAG------------FDYLIILWDVGKGEAL 212 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~-----h~~~V~~~~~~p~~~~~l~s~s------------~d~~v~iwd~~~~~~~ 212 (494)
.|.+||+.+++ .+..+.. |...+.+++|+|++ +.|++++ .++.|.+||+.+++.+
T Consensus 57 ~v~~~d~~~~~-------~~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~ 128 (337)
T 1pby_B 57 SLVKIDLVTGE-------TLGRIDLSTPEERVKSLFGAALSPDG-KTLAIYESPVRLELTHFEVQPTRVALYDAETLSRR 128 (337)
T ss_dssp EEEEEETTTCC-------EEEEEECCBTTEEEECTTCEEECTTS-SEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEE
T ss_pred eEEEEECCCCC-------eEeeEEcCCcccccccccceEECCCC-CEEEEEecccccccccccccCceEEEEECCCCcEE
Confidence 69999998873 3333321 22357789999998 5777775 5799999999999888
Q ss_pred EEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCc----
Q psy14130 213 TVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDR---- 288 (494)
Q Consensus 213 ~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~---- 288 (494)
..+.. ...+.+++|+|+|++|+++ ++.|.+||+.+++.+..+..+... ....|+|++..+++++ ..++
T Consensus 129 ~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~--~~~~~s~dg~~l~~~~---~~~~~~~~ 200 (337)
T 1pby_B 129 KAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWE--AETYAQPDVLAVWNQH---ESSGVMAT 200 (337)
T ss_dssp EEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTT--TTTBCCCBCCCCCCCC---TTTTEEEE
T ss_pred EEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccC--CCceeCCCccEEeeec---cCCCceee
Confidence 77764 5568889999999988888 688999999999987777655422 1236778766565544 2333
Q ss_pred -------------------eEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEe
Q psy14130 289 -------------------QVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHF 349 (494)
Q Consensus 289 -------------------~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~ 349 (494)
.|.+||+.+.... ......+...+..++|+|++++++++ ++.|++||+.+++....+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~---~~~v~~~d~~~~~~~~~~ 276 (337)
T 1pby_B 201 PFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MREVRIMDVFYFSTAVNPAKTRAFGA---YNVLESFDLEKNASIKRV 276 (337)
T ss_dssp EEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEEEECSSCEEEEEECTTSSEEEEE---ESEEEEEETTTTEEEEEE
T ss_pred eeeccccccccccccccccceEEEeCCCCCce-EeecCCCCCceeeEEECCCCCEEEEe---CCeEEEEECCCCcCccee
Confidence 5789999876543 33223344567889999999999554 789999999988754332
Q ss_pred cccccCCCCeeEEEEecCCceeee--ccceeEEEEeeC
Q psy14130 350 LNQSLSGAPQRGLGFMPKRGCDVT--QCEIFRFFKLHT 385 (494)
Q Consensus 350 ~~~~~~~~~v~~~~~~p~~~~~~~--~~~~~~~~~l~~ 385 (494)
. ....+.+++|+|++..++. .++.+++|++.+
T Consensus 277 ~----~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~ 310 (337)
T 1pby_B 277 P----LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAET 310 (337)
T ss_dssp E----CSSCCCEEEECTTSCEEEEESBSSEEEEEETTT
T ss_pred c----CCCceeeEEECCCCCEEEEEcCCCcEEEEECcC
Confidence 2 2356789999999986554 378899999877
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.1e-17 Score=155.43 Aligned_cols=155 Identities=10% Similarity=0.074 Sum_probs=113.5
Q ss_pred cEEEEEEcCCCCCEEEEEeCCCeEEEEECCC-CeEEEEecCCCCceEEEEEcCCCCEEEEEe-CCCeEEEEeCC-CCceE
Q psy14130 178 RVGYIEWHPTAENVVASAGFDYLIILWDVGK-GEALTVIDCHPDVINCLSFNRDGSRLVTTC-KDKTVRVLDPR-TGLVI 254 (494)
Q Consensus 178 ~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~-~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~-~d~~v~iwd~~-~~~~~ 254 (494)
.+.+++|+|++..++++++.|+.+++|++.. +.....+..|...+.+++|+|+|+.|+.++ .++.+++|++. .+..+
T Consensus 130 ~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~ 209 (297)
T 2ojh_A 130 PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSV 209 (297)
T ss_dssp SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCE
T ss_pred CccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCc
Confidence 4899999999954445888899999998632 334456677888999999999999888766 58999999886 45566
Q ss_pred EEeeecCCCCceEEEEECCCCeEEEEEecCC-------CCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEE
Q psy14130 255 SQGVCHPGTRSSKAVFIGDTGRIVTTGFSRH-------SDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFL 327 (494)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~-------~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 327 (494)
..+..|... +..+.|+|++..+++++.... .++.|.+||+.+...........+...+..+.|+|+++.|++
T Consensus 210 ~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~ 288 (297)
T 2ojh_A 210 ERITDSAYG-DWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAY 288 (297)
T ss_dssp EECCCCSEE-EEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEE
T ss_pred EEEecCCcc-cCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEE
Confidence 677666654 788999999777776662110 126799999987654333332345667888999999999956
Q ss_pred EEeCCC
Q psy14130 328 AGKGDG 333 (494)
Q Consensus 328 ~g~~dg 333 (494)
++..++
T Consensus 289 ~~~~~~ 294 (297)
T 2ojh_A 289 VRYFPV 294 (297)
T ss_dssp EEECCC
T ss_pred EEeccC
Confidence 555443
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1e-17 Score=183.35 Aligned_cols=216 Identities=10% Similarity=0.044 Sum_probs=159.1
Q ss_pred cEE-EEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 150 RVK-LWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 150 ~v~-iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
.+. +|++.++ .. ..+.+|...+.+++|+|+| +.|++++.++.|++||+.+++....+.+|.+.+.+++|+
T Consensus 359 ~l~~~~d~~~~-------~~-~~l~~~~~~~~~~~~SpDG-~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~S 429 (1045)
T 1k32_A 359 DFLGIYDYRTG-------KA-EKFEENLGNVFAMGVDRNG-KFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTIS 429 (1045)
T ss_dssp EEEEEEETTTC-------CE-EECCCCCCSEEEEEECTTS-SEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEEC
T ss_pred ceEEEEECCCC-------Cc-eEecCCccceeeeEECCCC-CEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEEC
Confidence 466 7788765 22 3344788899999999998 799999999999999999998888887899999999999
Q ss_pred CCCCEEEEEeCCC----------eEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCC
Q psy14130 229 RDGSRLVTTCKDK----------TVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDL 298 (494)
Q Consensus 229 ~~~~~l~s~~~d~----------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~ 298 (494)
|||++|++++.++ .|++||+.+++ +..+..|... +..+.|+|++..+++.+ .++...+|+....
T Consensus 430 pDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~-~~~~~~spdG~~l~~~s----~~~~~~~~~~~~~ 503 (1045)
T 1k32_A 430 DNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSH-DYAPAFDADSKNLYYLS----YRSLDPSPDRVVL 503 (1045)
T ss_dssp TTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSB-EEEEEECTTSCEEEEEE----SCCCCCEECSSSS
T ss_pred CCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcc-cCCceEcCCCCEEEEEe----cccCCcCcchhcc
Confidence 9999999887654 89999999887 6667677655 77889999977777665 5555555653221
Q ss_pred CC-------------------c---------------------eeEeee-cCCCceEEeEEeCCCCEEEE----------
Q psy14130 299 NT-------------------P---------------------LALETV-DSSSGVLFPYYDHDTRILFL---------- 327 (494)
Q Consensus 299 ~~-------------------~---------------------~~~~~~-~~~~~v~~~~~~~~~~~l~~---------- 327 (494)
.. + .....+ .+...+..+.++||++.+++
T Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~ 583 (1045)
T 1k32_A 504 NFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAY 583 (1045)
T ss_dssp CEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHH
T ss_pred ccccccCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCccccc
Confidence 10 0 001111 13356778999999987743
Q ss_pred --EEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec-cceeEEEEeeCCC
Q psy14130 328 --AGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ-CEIFRFFKLHTTR 387 (494)
Q Consensus 328 --~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~-~~~~~~~~l~~~~ 387 (494)
+...+..|.+||+.+++. ..+. ..+.+++|+|||..+++. ++.+++|++.+.+
T Consensus 584 ~~~~~~~~~l~~~d~~~~~~-~~l~------~~v~~~~~S~DG~~l~~~~~~~i~~~d~~~~~ 639 (1045)
T 1k32_A 584 YQGAPEKGVLLKYDVKTRKV-TEVK------NNLTDLRLSADRKTVMVRKDDGKIYTFPLEKP 639 (1045)
T ss_dssp HHCCCCCEEEEEEETTTCCE-EEEE------EEEEEEEECTTSCEEEEEETTSCEEEEESSCT
T ss_pred ccccCCCceEEEEECCCCcE-EEee------cCcceEEECCCCCEEEEEcCCcEEEEeCccCc
Confidence 122355788888888764 2222 458899999999877664 5689999998743
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.9e-16 Score=173.41 Aligned_cols=184 Identities=10% Similarity=0.022 Sum_probs=140.7
Q ss_pred EEEEEEcCcEEEEEcCCCCCCCCcccceEecccccc-cEEEEEEcCCCCCEEEEEeCCCeEE-EEECCCCeEEEEecCCC
Q psy14130 142 AFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKR-RVGYIEWHPTAENVVASAGFDYLII-LWDVGKGEALTVIDCHP 219 (494)
Q Consensus 142 ~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~-~V~~~~~~p~~~~~l~s~s~d~~v~-iwd~~~~~~~~~~~~h~ 219 (494)
.+++...+.|.+|++.++ . ...+..|.. .+.+++|+ +| ..|++++.+..+. +||+.+++.. .+.+|.
T Consensus 310 ~la~~~~~~i~~~~~~~~-------~-~~~~~~~~~~~~~~~~~s-dg-~~l~~~s~~~~l~~~~d~~~~~~~-~l~~~~ 378 (1045)
T 1k32_A 310 LIAFVSRGQAFIQDVSGT-------Y-VLKVPEPLRIRYVRRGGD-TK-VAFIHGTREGDFLGIYDYRTGKAE-KFEENL 378 (1045)
T ss_dssp CEEEEETTEEEEECTTSS-------B-EEECSCCSCEEEEEECSS-SE-EEEEEEETTEEEEEEEETTTCCEE-ECCCCC
T ss_pred EEEEEEcCEEEEEcCCCC-------c-eEEccCCCcceEEeeeEc-CC-CeEEEEECCCceEEEEECCCCCce-EecCCc
Confidence 344444567999998765 2 234566777 89999999 87 6888888888898 9999877654 444788
Q ss_pred CceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecC------CCCceEEEE
Q psy14130 220 DVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSR------HSDRQVGLW 293 (494)
Q Consensus 220 ~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~------~~d~~i~iw 293 (494)
..+.+++|+|||++|++++.++.|++||+.+++.......|... +..++|+|++..+++++... ..++.|++|
T Consensus 379 ~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~-v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~ 457 (1045)
T 1k32_A 379 GNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAM-ITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVY 457 (1045)
T ss_dssp CSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSC-CCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEE
T ss_pred cceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCC-ccceEECCCCCeEEEEecCccccccCCCCCeEEEE
Confidence 99999999999999999999999999999999987777677776 78999999977776666211 123599999
Q ss_pred eCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEee
Q psy14130 294 DENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELT 341 (494)
Q Consensus 294 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~ 341 (494)
|+.+.. . .....+...+..++|+|||+.| +.++.++...+|+..
T Consensus 458 d~~~g~-~--~~l~~~~~~~~~~~~spdG~~l-~~~s~~~~~~~~~~~ 501 (1045)
T 1k32_A 458 DMEGRK-I--FAATTENSHDYAPAFDADSKNL-YYLSYRSLDPSPDRV 501 (1045)
T ss_dssp ETTTTE-E--EECSCSSSBEEEEEECTTSCEE-EEEESCCCCCEECSS
T ss_pred ECCCCc-E--EEeeCCCcccCCceEcCCCCEE-EEEecccCCcCcchh
Confidence 998743 2 2223355668889999999999 566677766666643
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.7e-17 Score=173.75 Aligned_cols=202 Identities=10% Similarity=0.128 Sum_probs=144.4
Q ss_pred cEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe--EEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEE
Q psy14130 178 RVGYIEWHPTAENVVASAGFDYLIILWDVGKGE--ALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVIS 255 (494)
Q Consensus 178 ~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~--~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~ 255 (494)
.|.+++|+|+| +.|++++. +.|++||+.++. ....+..|...+.+++|+|||++|++++ ++.|++||+.+++...
T Consensus 110 ~v~~~~~SpDg-~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~ 186 (741)
T 2ecf_A 110 GIVDYQWSPDA-QRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQ 186 (741)
T ss_dssp ESCCCEECTTS-SEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEE
T ss_pred CcceeEECCCC-CEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEE
Confidence 37899999999 68888876 999999998873 3455677888999999999999999987 4699999999887655
Q ss_pred EeeecCCC---------------CceEEEEECCCCeEEEEEecCC-----------------------------CCceEE
Q psy14130 256 QGVCHPGT---------------RSSKAVFIGDTGRIVTTGFSRH-----------------------------SDRQVG 291 (494)
Q Consensus 256 ~~~~~~~~---------------~~~~~~~~~~~~~l~~~g~~~~-----------------------------~d~~i~ 291 (494)
....+... .+..+.|+|++..|+++..... ....|.
T Consensus 187 ~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~ 266 (741)
T 2ecf_A 187 LTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLG 266 (741)
T ss_dssp CCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEE
T ss_pred eccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEE
Confidence 44433321 1367899999877777762110 001788
Q ss_pred EEeCCC-CCCceeEeee-cCCCceEEeEEeCCCCEEEEEEe----CCCcEEEEEeeCCCceEEecccccCC--CCeeEEE
Q psy14130 292 LWDEND-LNTPLALETV-DSSSGVLFPYYDHDTRILFLAGK----GDGNIRYYELTNERPYIHFLNQSLSG--APQRGLG 363 (494)
Q Consensus 292 iwd~~~-~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~g~----~dg~i~~wd~~~~~~~~~~~~~~~~~--~~v~~~~ 363 (494)
+||+.+ .... .+... .+...+..++| |||+.|++++. .+..|++||+.+++... .+...... ..+.+++
T Consensus 267 ~~d~~~~~~~~-~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~-~~~~~~~~~~~~~~~~~ 343 (741)
T 2ecf_A 267 VISPAEQAQTQ-WIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRV-LAHETSPTWVPLHNSLR 343 (741)
T ss_dssp EECSSTTCCCE-EECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEE-EEEEECSSCCCCCSCCE
T ss_pred EEECCCCCceE-EecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEE-EEEcCCCCcCCcCCceE
Confidence 999876 5432 22111 24567889999 99999955543 35779999999987532 22222111 1457899
Q ss_pred EecCCceeeec--cceeEEEEeeC
Q psy14130 364 FMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 364 ~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
|+|++.+++++ ++..++|.+..
T Consensus 344 ~spdg~~~~~~~~~g~~~l~~~~~ 367 (741)
T 2ecf_A 344 FLDDGSILWSSERTGFQHLYRIDS 367 (741)
T ss_dssp ECTTSCEEEEECTTSSCEEEEECS
T ss_pred ECCCCeEEEEecCCCccEEEEEcC
Confidence 99999876664 67789998874
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.1e-16 Score=151.05 Aligned_cols=208 Identities=10% Similarity=0.103 Sum_probs=146.1
Q ss_pred ccccccEEEEEEcCCCCCEEEEEeC--CCeEEEEECCCCe--EEEEecCCCCceEEEEEcCCCCEEEEEe-CCCeEEEEe
Q psy14130 173 HGHKRRVGYIEWHPTAENVVASAGF--DYLIILWDVGKGE--ALTVIDCHPDVINCLSFNRDGSRLVTTC-KDKTVRVLD 247 (494)
Q Consensus 173 ~~h~~~V~~~~~~p~~~~~l~s~s~--d~~v~iwd~~~~~--~~~~~~~h~~~v~~l~~~~~~~~l~s~~-~d~~v~iwd 247 (494)
..+...+..++|+|+| ++++++.. ++.|.+||+.+++ .+..+..+...+..++|+|+|++|++++ .++.|++||
T Consensus 36 ~~~~~~p~~~a~spdg-~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~ 114 (347)
T 3hfq_A 36 LAATQNPTYLALSAKD-CLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMK 114 (347)
T ss_dssp EEECSCCCCEEECTTC-EEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred eeccCCcceEEEccCC-eEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEE
Confidence 3455677889999998 45544432 6899999997776 4445455778899999999999998888 789999999
Q ss_pred CC-CCc--eEEEeeecC--------CCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEe--eecCCCceE
Q psy14130 248 PR-TGL--VISQGVCHP--------GTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALE--TVDSSSGVL 314 (494)
Q Consensus 248 ~~-~~~--~~~~~~~~~--------~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~--~~~~~~~v~ 314 (494)
+. ++. .+..+.... ...+..++|+|++. +++++ ..++.|++||+.......... .......+.
T Consensus 115 ~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~---~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~ 190 (347)
T 3hfq_A 115 IAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVID---LGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPR 190 (347)
T ss_dssp ECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEE---TTTTEEEEEEECTTSCEEEEEEEECCTTCCEE
T ss_pred eCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEe---CCCCEEEEEEECCCCcEEEeeeEEcCCCCCCc
Confidence 96 333 233332211 11266799999966 88888 678999999998322222222 222334678
Q ss_pred EeEEeCCCCEEEEEEeCCCcEEEEEeeC--CCceE-EecccccC----CCCeeEEEEecCCcee-eec--cceeEEEEee
Q psy14130 315 FPYYDHDTRILFLAGKGDGNIRYYELTN--ERPYI-HFLNQSLS----GAPQRGLGFMPKRGCD-VTQ--CEIFRFFKLH 384 (494)
Q Consensus 315 ~~~~~~~~~~l~~~g~~dg~i~~wd~~~--~~~~~-~~~~~~~~----~~~v~~~~~~p~~~~~-~~~--~~~~~~~~l~ 384 (494)
.++|+|||+++++++..++.|.+|++.. ++... ..+..... ...+.+++|+|+|..+ ++. ++.+.+|++.
T Consensus 191 ~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~ 270 (347)
T 3hfq_A 191 HLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVT 270 (347)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEEC
T ss_pred eEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEEC
Confidence 8999999999988888899999999985 43211 11111111 1458899999999865 443 7889999997
Q ss_pred C
Q psy14130 385 T 385 (494)
Q Consensus 385 ~ 385 (494)
.
T Consensus 271 ~ 271 (347)
T 3hfq_A 271 A 271 (347)
T ss_dssp G
T ss_pred C
Confidence 5
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=6.1e-17 Score=170.07 Aligned_cols=203 Identities=11% Similarity=0.036 Sum_probs=143.7
Q ss_pred ccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCC-----C
Q psy14130 177 RRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRT-----G 251 (494)
Q Consensus 177 ~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~-----~ 251 (494)
..|.+++|+|+ ..++++. |+.|++||+.+++... +..+...+.+++|+|||+.|+++ .|+.|++||+.+ +
T Consensus 82 ~~v~~~~~spd-~~~~~~~--~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g 156 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT--QGGLVGFDMLARKVTY-LFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMS 156 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE--TTEEEEEETTTTEEEE-EECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCC
T ss_pred cCceeEEECCC-CeEEEEE--CCEEEEEECCCCceEE-ccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCC
Confidence 56999999999 4555553 5999999999887654 44467789999999999999985 689999999998 7
Q ss_pred ceEEEeeecCCC-------------CceEEEEECCCCeEEEEEecC-----------------------------CCCce
Q psy14130 252 LVISQGVCHPGT-------------RSSKAVFIGDTGRIVTTGFSR-----------------------------HSDRQ 289 (494)
Q Consensus 252 ~~~~~~~~~~~~-------------~~~~~~~~~~~~~l~~~g~~~-----------------------------~~d~~ 289 (494)
+.......+... .+..+.|+|++..|+++++.. ..+..
T Consensus 157 ~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~ 236 (706)
T 2z3z_A 157 RAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVT 236 (706)
T ss_dssp CCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEE
T ss_pred CcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeE
Confidence 765544433331 137889999977777665321 14578
Q ss_pred EEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCC-----cEEEEEeeCCCceEEecccccC--CCCeeEE
Q psy14130 290 VGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDG-----NIRYYELTNERPYIHFLNQSLS--GAPQRGL 362 (494)
Q Consensus 290 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg-----~i~~wd~~~~~~~~~~~~~~~~--~~~v~~~ 362 (494)
|++||+.+...........+...+..++|+|||+.| ++++.|+ .|++||+.+++........... ...+.++
T Consensus 237 l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l-~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~ 315 (706)
T 2z3z_A 237 VGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENIL-YVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPL 315 (706)
T ss_dssp EEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEE-EEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCC
T ss_pred EEEEECCCCceEeeccCCCCceeEeeEEEECCCCEE-EEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCc
Confidence 999999875422111111344678899999999998 5545554 8999999998433333222111 1235788
Q ss_pred EEec--CCceeeec--cceeEEEEeeC
Q psy14130 363 GFMP--KRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 363 ~~~p--~~~~~~~~--~~~~~~~~l~~ 385 (494)
+|+| ++.+++++ ++.+++|.+..
T Consensus 316 ~~sp~~dg~~l~~~~~~g~~~l~~~~~ 342 (706)
T 2z3z_A 316 TFLPGSNNQFIWQSRRDGWNHLYLYDT 342 (706)
T ss_dssp EECTTCSSEEEEEECTTSSCEEEEEET
T ss_pred eeecCCCCEEEEEEccCCccEEEEEEC
Confidence 9999 99877764 67899999874
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=99.75 E-value=1.4e-15 Score=146.06 Aligned_cols=224 Identities=13% Similarity=0.157 Sum_probs=147.9
Q ss_pred CcEEEEEcCCC-CCCCCcccceEecccccccEEEEEEcCCCCCEEEEEe-CCCeEEEEECCCCeEEEE------ecC---
Q psy14130 149 HRVKLWYIPDG-GLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAG-FDYLIILWDVGKGEALTV------IDC--- 217 (494)
Q Consensus 149 ~~v~iw~~~~~-~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s-~d~~v~iwd~~~~~~~~~------~~~--- 217 (494)
+.|.+|++... +.. ..+.....+......+++ ++ +.|++++ .++.|.+|++.....+.. ..+
T Consensus 75 ~~v~~~~~~~~~g~~----~~~~~~~~~~~~p~~~~~--dg-~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~ 147 (361)
T 3scy_A 75 AAVSAFAFDKEKGTL----HLLNTQKTMGADPCYLTT--NG-KNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGP 147 (361)
T ss_dssp CEEEEEEEETTTTEE----EEEEEEECSSSCEEEEEE--CS-SEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCS
T ss_pred CcEEEEEEeCCCCcE----EEeeEeccCCCCcEEEEE--CC-CEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCC
Confidence 36899988753 111 233344445566778888 66 4555554 688999999975432211 111
Q ss_pred -----CCCceEEEEEcCCCCEEEEEe-CCCeEEEEeCCCCc-------eE-----EEeeecCCCCceEEEEECCCCeEEE
Q psy14130 218 -----HPDVINCLSFNRDGSRLVTTC-KDKTVRVLDPRTGL-------VI-----SQGVCHPGTRSSKAVFIGDTGRIVT 279 (494)
Q Consensus 218 -----h~~~v~~l~~~~~~~~l~s~~-~d~~v~iwd~~~~~-------~~-----~~~~~~~~~~~~~~~~~~~~~~l~~ 279 (494)
+...+.+++|+|+|++|++++ .++.|++|++.... .. .......+..+..++|+|++..+++
T Consensus 148 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v 227 (361)
T 3scy_A 148 DKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYL 227 (361)
T ss_dssp CTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEE
T ss_pred CccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEE
Confidence 123458899999999776655 58999999887543 11 2222333333788999999777777
Q ss_pred EEecCCCCceEEEEeCCCCCCceeEeee----cCCCceEEeEEeCCCCEEEEEEeC-CCcEEEEEee--CCCceEEeccc
Q psy14130 280 TGFSRHSDRQVGLWDENDLNTPLALETV----DSSSGVLFPYYDHDTRILFLAGKG-DGNIRYYELT--NERPYIHFLNQ 352 (494)
Q Consensus 280 ~g~~~~~d~~i~iwd~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~g~~-dg~i~~wd~~--~~~~~~~~~~~ 352 (494)
++ ..++.|.+||+.+... ...... .+......++|+|||++|+++... ++.|.+|++. +++. ..+..
T Consensus 228 ~~---~~~~~v~v~~~~~g~~-~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~--~~~~~ 301 (361)
T 3scy_A 228 IN---EIGGTVIAFRYADGML-DEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTL--TKVGY 301 (361)
T ss_dssp EE---TTTCEEEEEEEETTEE-EEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCE--EEEEE
T ss_pred Ec---CCCCeEEEEEecCCce-EEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcE--EEeeE
Confidence 77 5789999999875321 111111 122456789999999999777766 7899999996 3442 22222
Q ss_pred ccCCCCeeEEEEecCCceeeec---cceeEEEEeeC
Q psy14130 353 SLSGAPQRGLGFMPKRGCDVTQ---CEIFRFFKLHT 385 (494)
Q Consensus 353 ~~~~~~v~~~~~~p~~~~~~~~---~~~~~~~~l~~ 385 (494)
...+..+++++|+|++..++.+ ++.+.+|++..
T Consensus 302 ~~~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~ 337 (361)
T 3scy_A 302 QLTGIHPRNFIITPNGKYLLVACRDTNVIQIFERDQ 337 (361)
T ss_dssp EECSSCCCEEEECTTSCEEEEEETTTTEEEEEEECT
T ss_pred ecCCCCCceEEECCCCCEEEEEECCCCCEEEEEEEC
Confidence 3224568899999999866553 67899988875
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=99.75 E-value=3.6e-16 Score=149.14 Aligned_cols=214 Identities=10% Similarity=0.014 Sum_probs=151.1
Q ss_pred CcEEEEEcCCCCCCCCcccceEeccccc-ccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCC------Cc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHK-RRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHP------DV 221 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~-~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~------~~ 221 (494)
++|.+||+.++ +.+..+..+. ..+..++|+|++..+++++..++.|.+||+.+++.+..+..+. ..
T Consensus 21 ~~v~~~d~~~~-------~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~ 93 (349)
T 1jmx_B 21 NNLHVVDVASD-------TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRS 93 (349)
T ss_dssp TEEEEEETTTT-------EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEEC
T ss_pred CeEEEEECCCC-------cEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEccccccccccc
Confidence 47999999887 4444554332 2577899999984455677788999999999998887776332 23
Q ss_pred eEEEEEcCCCCEEEEEeCC------------CeEEEEeCCCCce---EEEeeecCCCCceEEEEECCCCeEEEEEecCCC
Q psy14130 222 INCLSFNRDGSRLVTTCKD------------KTVRVLDPRTGLV---ISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHS 286 (494)
Q Consensus 222 v~~l~~~~~~~~l~s~~~d------------~~v~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 286 (494)
+.+++|+|+|++|++++.+ +.|.+||+.+++. +..+..+. . +..++|+|++. +++++ .
T Consensus 94 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~-~-~~~~~~s~dg~-l~~~~----~ 166 (349)
T 1jmx_B 94 MYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPR-Q-VYLMRAADDGS-LYVAG----P 166 (349)
T ss_dssp SSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCS-S-CCCEEECTTSC-EEEES----S
T ss_pred ccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCC-c-ccceeECCCCc-EEEcc----C
Confidence 7889999999999998865 8999999988543 33333333 3 67888999965 66543 3
Q ss_pred CceEEEEeCCCCCCceeEeeec----------------------------------------------------------
Q psy14130 287 DRQVGLWDENDLNTPLALETVD---------------------------------------------------------- 308 (494)
Q Consensus 287 d~~i~iwd~~~~~~~~~~~~~~---------------------------------------------------------- 308 (494)
.|.+||+.+......+....
T Consensus 167 --~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 244 (349)
T 1jmx_B 167 --DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGK 244 (349)
T ss_dssp --SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCC
T ss_pred --cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCc
Confidence 39999987654322111000
Q ss_pred --------CCCceEEeEEeC-CCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cce
Q psy14130 309 --------SSSGVLFPYYDH-DTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEI 377 (494)
Q Consensus 309 --------~~~~v~~~~~~~-~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~ 377 (494)
....+..++++| +++.++++ ++.|.+||+.+++....+. ....+.+++|+|++..++.+ ++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~sp~dg~~l~~~---~~~v~~~d~~~~~~~~~~~----~~~~~~~~~~s~dg~~l~~~~~~~~ 317 (349)
T 1jmx_B 245 THTQEFADLTELYFTGLRSPKDPNQIYGV---LNRLAKYDLKQRKLIKAAN----LDHTYYCVAFDKKGDKLYLGGTFND 317 (349)
T ss_dssp EEEEEEEECSSCEEEEEECSSCTTEEEEE---ESEEEEEETTTTEEEEEEE----CSSCCCEEEECSSSSCEEEESBSSE
T ss_pred EEecccccCCCcceeeEecCCCCCEEEEE---cCeEEEEECccCeEEEEEc----CCCCccceEECCCCCEEEEecCCCe
Confidence 001344667889 99998554 8899999999987543332 23457899999998765543 788
Q ss_pred eEEEEeeC
Q psy14130 378 FRFFKLHT 385 (494)
Q Consensus 378 ~~~~~l~~ 385 (494)
+++|++.+
T Consensus 318 v~v~d~~~ 325 (349)
T 1jmx_B 318 LAVFNPDT 325 (349)
T ss_dssp EEEEETTT
T ss_pred EEEEeccc
Confidence 99999876
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.1e-16 Score=151.85 Aligned_cols=217 Identities=12% Similarity=0.033 Sum_probs=156.9
Q ss_pred CcEEEEEcCCCCCCCCcccceEecc-cccc-cEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecC-C----CCc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLH-GHKR-RVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDC-H----PDV 221 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~-~h~~-~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~-h----~~~ 221 (494)
+.|.+||+.++ +.+..+. ++.. .+.+++|+|++..++++++.++.|.+||+.+++.+..+.. + ...
T Consensus 11 ~~v~~~d~~~~-------~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~ 83 (337)
T 1pby_B 11 DKLVVIDTEKM-------AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKS 83 (337)
T ss_dssp TEEEEEETTTT-------EEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEEC
T ss_pred CeEEEEECCCC-------cEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccccc
Confidence 37999999887 4444444 2222 4789999999855567777789999999999988877653 2 126
Q ss_pred eEEEEEcCCCCEEEEEe------------CCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCce
Q psy14130 222 INCLSFNRDGSRLVTTC------------KDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQ 289 (494)
Q Consensus 222 v~~l~~~~~~~~l~s~~------------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~ 289 (494)
+.+++|+|+|++|++++ .++.|.+||+.+++.+..+.... .+..+.|+|++..++++ ++.
T Consensus 84 ~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~------~~~ 155 (337)
T 1pby_B 84 LFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPR--QITMLAWARDGSKLYGL------GRD 155 (337)
T ss_dssp TTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCS--SCCCEEECTTSSCEEEE------SSS
T ss_pred ccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCC--CcceeEECCCCCEEEEe------CCe
Confidence 77899999999999886 57999999999998877776532 26788899996555544 467
Q ss_pred EEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCC-----------------------cEEEEEeeCCCce
Q psy14130 290 VGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDG-----------------------NIRYYELTNERPY 346 (494)
Q Consensus 290 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg-----------------------~i~~wd~~~~~~~ 346 (494)
|.+||+.+...... +........+.|+|+++.+++++..++ .|.+||+.+++..
T Consensus 156 i~~~d~~~~~~~~~---~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 232 (337)
T 1pby_B 156 LHVMDPEAGTLVED---KPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA 232 (337)
T ss_dssp EEEEETTTTEEEEE---ECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE
T ss_pred EEEEECCCCcEeee---eeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce
Confidence 99999987543222 222211123478999998866655444 3689999988753
Q ss_pred EEecccccCCCCeeEEEEecCCceeeeccceeEEEEeeC
Q psy14130 347 IHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 347 ~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~~ 385 (494)
.+........+.+++|+|++..++..++.+++|++.+
T Consensus 233 --~~~~~~~~~~~~~~~~s~dg~~l~~~~~~v~~~d~~~ 269 (337)
T 1pby_B 233 --MREVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDLEK 269 (337)
T ss_dssp --EEEEEECSSCEEEEEECTTSSEEEEEESEEEEEETTT
T ss_pred --EeecCCCCCceeeEEECCCCCEEEEeCCeEEEEECCC
Confidence 2222223456789999999998887799999999876
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.73 E-value=1.9e-16 Score=166.69 Aligned_cols=225 Identities=14% Similarity=0.069 Sum_probs=150.6
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCce-------
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVI------- 222 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v------- 222 (494)
.+.+||+.++.. ..+....+|...+.+++|+|+| +.||.++. +.|++||+.+++.......+...+
T Consensus 92 ~i~~~d~~~~~~-----~~l~~~~~~~~~~~~~~~SPdG-~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~ 164 (723)
T 1xfd_A 92 YYVLSKIPHGDP-----QSLDPPEVSNAKLQYAGWGPKG-QQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSD 164 (723)
T ss_dssp EEEEEESSSCCC-----EECCCTTCCSCCCSBCCBCSST-TCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECC
T ss_pred eEEEEECCCCce-----EeccCCccccccccccEECCCC-CEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccc
Confidence 689999988743 1222334566678999999999 67888775 799999999888766665544433
Q ss_pred -----------EEEEEcCCCCEEEEEeCCC----------------------------------eEEEEeCCCCceEEEe
Q psy14130 223 -----------NCLSFNRDGSRLVTTCKDK----------------------------------TVRVLDPRTGLVISQG 257 (494)
Q Consensus 223 -----------~~l~~~~~~~~l~s~~~d~----------------------------------~v~iwd~~~~~~~~~~ 257 (494)
.+++|+|||+.|++++.|+ .|++||+.+++....+
T Consensus 165 ~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l 244 (723)
T 1xfd_A 165 WLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEM 244 (723)
T ss_dssp HHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEEC
T ss_pred eeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEe
Confidence 7899999999999987653 7999999988865666
Q ss_pred eecC-----CCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCce----EEeEEeCCCCEEEEE
Q psy14130 258 VCHP-----GTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGV----LFPYYDHDTRILFLA 328 (494)
Q Consensus 258 ~~~~-----~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v----~~~~~~~~~~~l~~~ 328 (494)
..+. ...+..+.|+|++..+++.......+..|++||+.+......... .+...+ ..++|+|||+.|++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~ 323 (723)
T 1xfd_A 245 MPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHED-ESEAWLHRQNEEPVFSKDGRKFFFI 323 (723)
T ss_dssp CCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEE-ECSSCCCCCCCCCEECTTSCSEEEE
T ss_pred eCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEe-ccCCEEeccCCCceEcCCCCeEEEE
Confidence 5542 223778999999554434432122457899999987653322221 122222 378999999988555
Q ss_pred -EeCCC------cEEEEE-eeCCCc--eEEecccccCCCCeeE-EEEecCCceeee--cc---ceeEEEEeeC
Q psy14130 329 -GKGDG------NIRYYE-LTNERP--YIHFLNQSLSGAPQRG-LGFMPKRGCDVT--QC---EIFRFFKLHT 385 (494)
Q Consensus 329 -g~~dg------~i~~wd-~~~~~~--~~~~~~~~~~~~~v~~-~~~~p~~~~~~~--~~---~~~~~~~l~~ 385 (494)
+..|+ .|.+|| ..+++. ...+. . ....+.. ++|+|++..++. .+ +..++|++..
T Consensus 324 ~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~-~--~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~ 393 (723)
T 1xfd_A 324 RAIPQGGRGKFYHITVSSSQPNSSNDNIQSIT-S--GDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANT 393 (723)
T ss_dssp EEECCSSSSCEEEEEEECSSCCSSSCCCCBSC-C--SSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECS
T ss_pred EecccCCCcceeEEEEEeccCCCCccceeEee-c--CCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeC
Confidence 66777 466666 333330 22221 1 1233444 699999987654 23 6789999875
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=99.73 E-value=9.7e-15 Score=140.49 Aligned_cols=187 Identities=11% Similarity=0.093 Sum_probs=123.5
Q ss_pred CcEEEEEcCC-CCCCCCcccceEecc-cccccEEEEEEcCCCCCEEEEEe-CCCeEEEEECC-CCeEE--EEec--CCCC
Q psy14130 149 HRVKLWYIPD-GGLSGNLNEWIMDLH-GHKRRVGYIEWHPTAENVVASAG-FDYLIILWDVG-KGEAL--TVID--CHPD 220 (494)
Q Consensus 149 ~~v~iw~~~~-~~~~~~~~~~~~~~~-~h~~~V~~~~~~p~~~~~l~s~s-~d~~v~iwd~~-~~~~~--~~~~--~h~~ 220 (494)
+.+.+|++.. +.+. ..+..+. .+...+.+++|+|+| ++|+++. .++.|++||+. +++.. ..+. .|..
T Consensus 119 g~v~v~~~~~~g~~~----~~~~~~~~~~~~~~~~~~~spdG-~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~ 193 (365)
T 1jof_A 119 GYGNVFSVSETGKLE----KNVQNYEYQENTGIHGMVFDPTE-TYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGD 193 (365)
T ss_dssp CEEEEEEECTTCCEE----EEEEEEECCTTCCEEEEEECTTS-SEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTC
T ss_pred ceEEEEccCCCCcCc----ceEeeEEeCCCCcceEEEECCCC-CEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCC
Confidence 3689999974 4221 1111111 245679999999999 5666655 46899999998 67543 3343 2467
Q ss_pred ceEEEEEcCCCCEEEEEeC-CCeEEEEeCC--CCceE---EEeeecC----C-C-------CceEEE-EECCCCeEEEEE
Q psy14130 221 VINCLSFNRDGSRLVTTCK-DKTVRVLDPR--TGLVI---SQGVCHP----G-T-------RSSKAV-FIGDTGRIVTTG 281 (494)
Q Consensus 221 ~v~~l~~~~~~~~l~s~~~-d~~v~iwd~~--~~~~~---~~~~~~~----~-~-------~~~~~~-~~~~~~~l~~~g 281 (494)
.+..++|+|||++|++++. ++.|.+|++. +++.. ..+.... + . .+..++ |+|++..++++.
T Consensus 194 ~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~ 273 (365)
T 1jof_A 194 HPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASS 273 (365)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEE
T ss_pred CCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEEC
Confidence 7999999999999988775 7899999765 56542 2222111 1 1 267888 999977676655
Q ss_pred ecCCCCc-----eEEEEeCCCCCCceeEe-eec-CCCceEEeEEeC---CCCEEEEEEeCCCcEEEEEeeCC
Q psy14130 282 FSRHSDR-----QVGLWDENDLNTPLALE-TVD-SSSGVLFPYYDH---DTRILFLAGKGDGNIRYYELTNE 343 (494)
Q Consensus 282 ~~~~~d~-----~i~iwd~~~~~~~~~~~-~~~-~~~~v~~~~~~~---~~~~l~~~g~~dg~i~~wd~~~~ 343 (494)
..+. .|.+|++.......... ... ....+..++|+| ||++|++++..++.|.+|++...
T Consensus 274 ---~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 274 ---RANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp ---EESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred ---CCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 2223 89999986322222211 122 234566789999 89999666555699999999876
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=99.72 E-value=8.7e-16 Score=146.43 Aligned_cols=176 Identities=10% Similarity=0.042 Sum_probs=122.4
Q ss_pred CcEEEEEcCCCCCCCCcccceEeccc-c-----cccEEEEEEcCCCCCEEEEEeCC------------CeEEEEECCCCe
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHG-H-----KRRVGYIEWHPTAENVVASAGFD------------YLIILWDVGKGE 210 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~-h-----~~~V~~~~~~p~~~~~l~s~s~d------------~~v~iwd~~~~~ 210 (494)
+.|.+||+.++ +....+.. + ...+.+++|+|+| +.|++++.+ +.|.+||+.+++
T Consensus 65 ~~i~~~d~~t~-------~~~~~~~~~~~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 136 (349)
T 1jmx_B 65 GDIYGIDLDTC-------KNTFHANLSSVPGEVGRSMYSFAISPDG-KEVYATVNPTQRLNDHYVVKPPRLEVFSTADGL 136 (349)
T ss_dssp TEEEEEETTTT-------EEEEEEESCCSTTEEEECSSCEEECTTS-SEEEEEEEEEEECSSCEEECCCEEEEEEGGGGG
T ss_pred CcEEEEeCCCC-------cEEEEEEcccccccccccccceEECCCC-CEEEEEcccccccccccccCCCeEEEEECCCcc
Confidence 36999999887 33333332 2 2347789999998 677777755 899999998743
Q ss_pred ---EEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCC-------------------------
Q psy14130 211 ---ALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPG------------------------- 262 (494)
Q Consensus 211 ---~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~------------------------- 262 (494)
.+..+. +...+.+++|+|+|+ +++++. .|.+||+.+++.+..+..+..
T Consensus 137 ~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (349)
T 1jmx_B 137 EAKPVRTFP-MPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSM 212 (349)
T ss_dssp GBCCSEEEE-CCSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEE
T ss_pred ccceeeecc-CCCcccceeECCCCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEe
Confidence 334444 344688999999999 555544 499999999987766653320
Q ss_pred ------------------------------------------CCceEEEEEC-CCCeEEEEEecCCCCceEEEEeCCCCC
Q psy14130 263 ------------------------------------------TRSSKAVFIG-DTGRIVTTGFSRHSDRQVGLWDENDLN 299 (494)
Q Consensus 263 ------------------------------------------~~~~~~~~~~-~~~~l~~~g~~~~~d~~i~iwd~~~~~ 299 (494)
..+..++++| ++. +++++ ++.|.+||+.+.+
T Consensus 213 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~-~l~~~-----~~~v~~~d~~~~~ 286 (349)
T 1jmx_B 213 LYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPN-QIYGV-----LNRLAKYDLKQRK 286 (349)
T ss_dssp EEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTT-EEEEE-----ESEEEEEETTTTE
T ss_pred eeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCC-EEEEE-----cCeEEEEECccCe
Confidence 0123445557 644 44444 6799999998754
Q ss_pred CceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCce
Q psy14130 300 TPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPY 346 (494)
Q Consensus 300 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~ 346 (494)
.. ..+.....+..++|+|+++.|++ ++.++.|.+||+.+++.+
T Consensus 287 ~~---~~~~~~~~~~~~~~s~dg~~l~~-~~~~~~v~v~d~~~~~~~ 329 (349)
T 1jmx_B 287 LI---KAANLDHTYYCVAFDKKGDKLYL-GGTFNDLAVFNPDTLEKV 329 (349)
T ss_dssp EE---EEEECSSCCCEEEECSSSSCEEE-ESBSSEEEEEETTTTEEE
T ss_pred EE---EEEcCCCCccceEECCCCCEEEE-ecCCCeEEEEecccccee
Confidence 32 22223445778999999999955 678899999999987754
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=99.71 E-value=4.5e-15 Score=142.82 Aligned_cols=240 Identities=7% Similarity=0.001 Sum_probs=153.9
Q ss_pred EEEEEEcCcEEEEEcC-CCCCCCCcccceEecccccccEEEEEEcCCCCC-EEEEEe-------------CCCeEEEEEC
Q psy14130 142 AFLVLPIHRVKLWYIP-DGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAEN-VVASAG-------------FDYLIILWDV 206 (494)
Q Consensus 142 ~~~~~~~~~v~iw~~~-~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~-~l~s~s-------------~d~~v~iwd~ 206 (494)
.+++...+.|.+|++. ++.+. .+.....+ +.+.+++|+|+|.. ++++++ .++++.+|++
T Consensus 53 ~l~~~~~~~v~~~~~~~~g~~~-----~~~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~ 126 (365)
T 1jof_A 53 NIYGAAMKKWSSFAVKSPTEIV-----HEASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSV 126 (365)
T ss_dssp EEEEEEBTEEEEEEEEETTEEE-----EEEEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEE
T ss_pred EEEEEccceEEEEEECCCCCEE-----EeeEeecC-CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEcc
Confidence 3444444479999987 55221 11111111 22456899999832 355553 6899999999
Q ss_pred C-CCeEEEEec----CCCCceEEEEEcCCCCEEEEEeC-CCeEEEEeCC-CCceE--EEeeecC-CCCceEEEEECCCCe
Q psy14130 207 G-KGEALTVID----CHPDVINCLSFNRDGSRLVTTCK-DKTVRVLDPR-TGLVI--SQGVCHP-GTRSSKAVFIGDTGR 276 (494)
Q Consensus 207 ~-~~~~~~~~~----~h~~~v~~l~~~~~~~~l~s~~~-d~~v~iwd~~-~~~~~--~~~~~~~-~~~~~~~~~~~~~~~ 276 (494)
. .++....+. .+...+.+++|+|||++|++++. ++.|++||+. +++.. ..+.... +..+..++|+|++..
T Consensus 127 ~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~ 206 (365)
T 1jof_A 127 SETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNY 206 (365)
T ss_dssp CTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSE
T ss_pred CCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCE
Confidence 7 465544333 25578999999999998887764 6899999998 77643 3333211 233788999999777
Q ss_pred EEEEEecCCCCceEEEEeCCC--CCCce---eEeeecCC----C-------ceEEeE-EeCCCCEEEEEEeCCC-----c
Q psy14130 277 IVTTGFSRHSDRQVGLWDEND--LNTPL---ALETVDSS----S-------GVLFPY-YDHDTRILFLAGKGDG-----N 334 (494)
Q Consensus 277 l~~~g~~~~~d~~i~iwd~~~--~~~~~---~~~~~~~~----~-------~v~~~~-~~~~~~~l~~~g~~dg-----~ 334 (494)
+++++ ..++.|.+|++.. +.... .+..+... . .+..++ |+|||++|+++...++ .
T Consensus 207 l~v~~---~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~ 283 (365)
T 1jof_A 207 LYALM---EAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGY 283 (365)
T ss_dssp EEEEE---TTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCE
T ss_pred EEEEE---CCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCe
Confidence 77777 5678999998653 22111 11112111 2 477899 9999999977665444 8
Q ss_pred EEEEEee-CCCceEEecccc-cCCCCeeEEEEec---CCceeeec---cceeEEEEeeCCCCeEEEe
Q psy14130 335 IRYYELT-NERPYIHFLNQS-LSGAPQRGLGFMP---KRGCDVTQ---CEIFRFFKLHTTRNMCEPI 393 (494)
Q Consensus 335 i~~wd~~-~~~~~~~~~~~~-~~~~~v~~~~~~p---~~~~~~~~---~~~~~~~~l~~~~~~~~~~ 393 (494)
|.+|++. +++. ....... .....+.+++|+| ++..+++. ++.+++|++.. + .+.++
T Consensus 284 i~v~~~~~~g~~-~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~-~-~l~~~ 347 (365)
T 1jof_A 284 IAGFKLRDCGSI-EKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKD-E-FLHRV 347 (365)
T ss_dssp EEEEEECTTSCE-EEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEET-T-EEEEE
T ss_pred EEEEEECCCCCE-EEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEch-h-hCcee
Confidence 9999997 5553 2211111 1234567899999 78776653 47899999987 2 44444
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.70 E-value=2.8e-15 Score=157.76 Aligned_cols=239 Identities=13% Similarity=0.045 Sum_probs=147.3
Q ss_pred cEEEEEEcCcEEEEEcCCCCCCCCcc--cceEecccccccE---------EEEEEcCCCCCEEEEEeCCC----------
Q psy14130 141 GAFLVLPIHRVKLWYIPDGGLSGNLN--EWIMDLHGHKRRV---------GYIEWHPTAENVVASAGFDY---------- 199 (494)
Q Consensus 141 g~~~~~~~~~v~iw~~~~~~~~~~~~--~~~~~~~~h~~~V---------~~~~~~p~~~~~l~s~s~d~---------- 199 (494)
..++....++|++|++.++....... .....+.||...| .+++|+|+| +.|++++.|.
T Consensus 122 ~~la~~~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG-~~la~~~~d~~~~~~~~~~~ 200 (719)
T 1z68_A 122 SKLAYVYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNG-KFLAYAEFNDTDIPVIAYSY 200 (719)
T ss_dssp TCEEEEETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTS-SEEEEEEEECTTSCEEEEEE
T ss_pred CEEEEEECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCC-CEEEEEEECCCCCceEEeec
Confidence 34444455689999998774311000 0000112222222 489999999 6888887552
Q ss_pred ------------------------eEEEEECCCCeEE---E-----EecCCCCceEEEEEcCCCCEEEEEeCC----CeE
Q psy14130 200 ------------------------LIILWDVGKGEAL---T-----VIDCHPDVINCLSFNRDGSRLVTTCKD----KTV 243 (494)
Q Consensus 200 ------------------------~v~iwd~~~~~~~---~-----~~~~h~~~v~~l~~~~~~~~l~s~~~d----~~v 243 (494)
.|++||+.+++.. . .+.+|...+.+++|+||++++++.... ..|
T Consensus 201 ~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l 280 (719)
T 1z68_A 201 YGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVL 280 (719)
T ss_dssp CCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEE
T ss_pred cCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEE
Confidence 7899999887642 1 234688899999999998877775432 348
Q ss_pred EEEe----CCCCceEEEe----eecCCCCce-----EEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCC
Q psy14130 244 RVLD----PRTGLVISQG----VCHPGTRSS-----KAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSS 310 (494)
Q Consensus 244 ~iwd----~~~~~~~~~~----~~~~~~~~~-----~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 310 (494)
.+|| +.++++...+ ..|... +. ...|+|++..++...........|.+||+.+.. ...+ ..+.
T Consensus 281 ~~~d~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~l--t~~~ 356 (719)
T 1z68_A 281 SICDFREDWQTWDCPKTQEHIEESRTGW-AGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQI--TSGK 356 (719)
T ss_dssp EEEEECSSSSSEECCGGGEEEEECSSSC-SSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEEC--SCSS
T ss_pred EEEcccCCCCCCceEEEEecccccCCce-EccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEec--ccCc
Confidence 8999 8877755444 355544 44 678999977766643222233467888876644 2222 1233
Q ss_pred CceEEeEEeCCCCEEEEEEeC----CCcEEEEEeeC--CCceEEeccc-cc-CCCCeeEEEEecCCceeeec---c--ce
Q psy14130 311 SGVLFPYYDHDTRILFLAGKG----DGNIRYYELTN--ERPYIHFLNQ-SL-SGAPQRGLGFMPKRGCDVTQ---C--EI 377 (494)
Q Consensus 311 ~~v~~~~~~~~~~~l~~~g~~----dg~i~~wd~~~--~~~~~~~~~~-~~-~~~~v~~~~~~p~~~~~~~~---~--~~ 377 (494)
..+..+.++ +++.|++++.. ++.+++|.+.. +......+.. .. +...+..+.|+|++..++.. . ..
T Consensus 357 ~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~ 435 (719)
T 1z68_A 357 WEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPI 435 (719)
T ss_dssp SCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCE
T ss_pred eEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCe
Confidence 456677777 88888777655 58899999875 3211222221 11 23457789999998866642 1 34
Q ss_pred eEEEEeeC
Q psy14130 378 FRFFKLHT 385 (494)
Q Consensus 378 ~~~~~l~~ 385 (494)
+.+|++.+
T Consensus 436 ~~l~d~~~ 443 (719)
T 1z68_A 436 STLHDGRT 443 (719)
T ss_dssp EEEECSSS
T ss_pred EEEEECCC
Confidence 56776654
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.70 E-value=5.3e-15 Score=143.41 Aligned_cols=223 Identities=11% Similarity=0.048 Sum_probs=141.9
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEE--EcCCCCCEEEEE----------------------eCCCeEEEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIE--WHPTAENVVASA----------------------GFDYLIILWD 205 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~--~~p~~~~~l~s~----------------------s~d~~v~iwd 205 (494)
.|.+||+.++ +....+..+...+.... ++|++ .+++.. ..+..|.+||
T Consensus 103 ~l~~~d~~~g-------~~~~~~~~~~~~~~~~~~~~~~dg-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d 174 (388)
T 3pe7_A 103 NLMRVDLATL-------EENVVYQVPAEWVGYGTWVANSDC-TKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVD 174 (388)
T ss_dssp EEEEEETTTC-------CEEEEEECCTTEEEEEEEEECTTS-SEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEE
T ss_pred eEEEEECCCC-------cceeeeechhhcccccceeECCCC-CeeccccccCcccccccccchhhhhhccCCcceEEEEE
Confidence 6999999987 33334444555554444 48988 566632 2457899999
Q ss_pred CCCCeEEEEecCCCCceEEEEEcC-CCCEEEEEeCC------CeEEEEeCCCCceEEEeeecCC-CCceEEEEECCCCeE
Q psy14130 206 VGKGEALTVIDCHPDVINCLSFNR-DGSRLVTTCKD------KTVRVLDPRTGLVISQGVCHPG-TRSSKAVFIGDTGRI 277 (494)
Q Consensus 206 ~~~~~~~~~~~~h~~~v~~l~~~~-~~~~l~s~~~d------~~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l 277 (494)
+.+++... +..+...+..++|+| ||+.|+.++.+ ..|.++|+..++. ..+..+.. ..+....|+|++..+
T Consensus 175 ~~~g~~~~-l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l 252 (388)
T 3pe7_A 175 LKTGESTV-ILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFWVPDGSAL 252 (388)
T ss_dssp TTTCCEEE-EEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEECTTSSCE
T ss_pred CCCCceEE-eecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceECCCCCEE
Confidence 99886544 444667899999999 99999887753 3788888876653 33333332 225678899998778
Q ss_pred EEEEecCCC-CceEEEEeCCCCCCceeEeeecCCCc----eEEeEEeCCCCEEEEEE--------eCCCcEEEEEeeCCC
Q psy14130 278 VTTGFSRHS-DRQVGLWDENDLNTPLALETVDSSSG----VLFPYYDHDTRILFLAG--------KGDGNIRYYELTNER 344 (494)
Q Consensus 278 ~~~g~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~----v~~~~~~~~~~~l~~~g--------~~dg~i~~wd~~~~~ 344 (494)
+.++..... +..|.+||+.+.... .+........ .....|+|||+.|+++. ..+..|++||+.+++
T Consensus 253 ~~~~~~~~~~~~~l~~~d~~~g~~~-~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~ 331 (388)
T 3pe7_A 253 VYVSYLKGSPDRFIYSADPETLENR-QLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGT 331 (388)
T ss_dssp EEEEEETTCCCEEEEEECTTTCCEE-EEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTE
T ss_pred EEEecCCCCCcceEEEEecCCCceE-EEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCc
Confidence 776632111 235999999876532 2222221000 11237999999885543 567789999999876
Q ss_pred ceEEecccccC---------CCCeeEEEEecCCceeeec---cceeEEEEeeC
Q psy14130 345 PYIHFLNQSLS---------GAPQRGLGFMPKRGCDVTQ---CEIFRFFKLHT 385 (494)
Q Consensus 345 ~~~~~~~~~~~---------~~~v~~~~~~p~~~~~~~~---~~~~~~~~l~~ 385 (494)
. ..+ ..... ...+..++|+|||..++.. ++...+|.+..
T Consensus 332 ~-~~l-~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l 382 (388)
T 3pe7_A 332 Q-HRV-ARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATL 382 (388)
T ss_dssp E-EEE-EECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEEC
T ss_pred e-EEe-ccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEEC
Confidence 4 222 22211 0147788999999866542 66777887664
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=3.3e-14 Score=134.70 Aligned_cols=223 Identities=6% Similarity=-0.011 Sum_probs=159.5
Q ss_pred cEEEEEcCCCCCCCCcccceEec-ccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe-EEEEe---------cCC
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDL-HGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE-ALTVI---------DCH 218 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~-~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~-~~~~~---------~~h 218 (494)
+|.+||..++.. ...+ .++-.....++++|+| +++++.+.++.|++||..... .+..+ .++
T Consensus 70 ~i~~~d~~~g~~-------~~~~~~~~~~~p~gia~d~~g-~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~ 141 (329)
T 3fvz_A 70 TILVIDPNNAEI-------LQSSGKNLFYLPHGLSIDTDG-NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNH 141 (329)
T ss_dssp CEEEECTTTCCE-------EEEECTTTCSSEEEEEECTTS-CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTC
T ss_pred cEEEEECCCCeE-------EeccCCCccCCceEEEECCCC-CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccc
Confidence 589999887732 2222 2455678999999998 689998889999999986442 45555 344
Q ss_pred CCceEEEEEcC-CCCEEEEEe-CCCeEEEEeCCCCceEEEeeecCC---------CCceEEEEECCCCeEEEEEecCCCC
Q psy14130 219 PDVINCLSFNR-DGSRLVTTC-KDKTVRVLDPRTGLVISQGVCHPG---------TRSSKAVFIGDTGRIVTTGFSRHSD 287 (494)
Q Consensus 219 ~~~v~~l~~~~-~~~~l~s~~-~d~~v~iwd~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~l~~~g~~~~~d 287 (494)
-....+|+++| ++.++++.+ .++.|++|| .+++.+..+..... ..+..+++.++++.++++. ..+
T Consensus 142 ~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d---~~~ 217 (329)
T 3fvz_A 142 FCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVAD---REN 217 (329)
T ss_dssp CSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEE---TTT
T ss_pred cCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEE---CCC
Confidence 55789999999 788888886 699999999 55776666642211 1267899999878899998 789
Q ss_pred ceEEEEeCCCCCCceeEeeecCCCceEEeEEeC------CCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeE
Q psy14130 288 RQVGLWDENDLNTPLALETVDSSSGVLFPYYDH------DTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRG 361 (494)
Q Consensus 288 ~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~------~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~ 361 (494)
+.|++||..++.....+........+..++++| +++.+ ++...+..|++||+.+++.+..+-........+.+
T Consensus 218 ~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~-v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ 296 (329)
T 3fvz_A 218 GRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPY-FGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHD 296 (329)
T ss_dssp TEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCC-TTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEE
T ss_pred CEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEE-eccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeE
Confidence 999999988544332222223345678888998 33322 33445568999999999875444222223456899
Q ss_pred EEEecCCceeeec--cceeEEEEeeC
Q psy14130 362 LGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 362 ~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
++++|+|.++++. +..+++|++..
T Consensus 297 ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 297 IVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred EEECCCCCEEEEECCCCEEEEEeCCc
Confidence 9999999888875 67788887765
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=99.66 E-value=2.1e-13 Score=126.30 Aligned_cols=188 Identities=14% Similarity=0.208 Sum_probs=130.2
Q ss_pred CcEEEEEE---cCcEEEEEcCCCCCCCCcccceEecc-cccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEe
Q psy14130 140 GGAFLVLP---IHRVKLWYIPDGGLSGNLNEWIMDLH-GHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVI 215 (494)
Q Consensus 140 ~g~~~~~~---~~~v~iw~~~~~~~~~~~~~~~~~~~-~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~ 215 (494)
+|.+.+.. .+.|.+|+ .++ ..+..+. .+...+.+++++|++ +++++...++.|.+||.. ++.+..+
T Consensus 88 ~g~l~v~~~~~~~~i~~~d-~~g-------~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~-g~~~~~~ 157 (286)
T 1q7f_A 88 SGDIIVTERSPTHQIQIYN-QYG-------QFVRKFGATILQHPRGVTVDNKG-RIIVVECKVMRVIIFDQN-GNVLHKF 157 (286)
T ss_dssp TTEEEEEECGGGCEEEEEC-TTS-------CEEEEECTTTCSCEEEEEECTTS-CEEEEETTTTEEEEECTT-SCEEEEE
T ss_pred CCeEEEEcCCCCCEEEEEC-CCC-------cEEEEecCccCCCceEEEEeCCC-CEEEEECCCCEEEEEcCC-CCEEEEe
Confidence 34444444 35689998 444 2223332 344678999999998 688888888999999964 5556555
Q ss_pred c--CCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecC-CCCceEEEEECCCCeEEEEEecCCCCc-eEE
Q psy14130 216 D--CHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHP-GTRSSKAVFIGDTGRIVTTGFSRHSDR-QVG 291 (494)
Q Consensus 216 ~--~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~g~~~~~d~-~i~ 291 (494)
. .+...+.+++++++|+++++...++.|++||.. ++.+..+..+. ...+..+++.++ +.++++. ..++ .|.
T Consensus 158 ~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~-G~l~v~~---~~~~~~i~ 232 (286)
T 1q7f_A 158 GCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSN-GEILIAD---NHNNFNLT 232 (286)
T ss_dssp ECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTT-CCEEEEE---CSSSCEEE
T ss_pred CCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCC-CCEEEEe---CCCCEEEE
Confidence 4 455678999999999988888889999999984 56666664432 123788889888 5677776 4665 999
Q ss_pred EEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCc
Q psy14130 292 LWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERP 345 (494)
Q Consensus 292 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~ 345 (494)
+||... .....+........+..++++|+|+.+ ++ +.|+.|++|++....+
T Consensus 233 ~~~~~g-~~~~~~~~~~~~~~~~~i~~~~~g~l~-vs-~~~~~v~v~~~~~~~p 283 (286)
T 1q7f_A 233 IFTQDG-QLISALESKVKHAQCFDVALMDDGSVV-LA-SKDYRLYIYRYVQLAP 283 (286)
T ss_dssp EECTTS-CEEEEEEESSCCSCEEEEEEETTTEEE-EE-ETTTEEEEEECSCCCC
T ss_pred EECCCC-CEEEEEcccCCCCcceeEEECCCCcEE-EE-CCCCeEEEEEcccccc
Confidence 999643 322222221222347789999999754 66 5799999999876543
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.64 E-value=2.1e-13 Score=142.06 Aligned_cols=195 Identities=10% Similarity=-0.003 Sum_probs=131.8
Q ss_pred ccccEEEEEEcCCCCCEEEEEeCC----------CeEEEEECCC------CeEEEEec-CCCCceEEEEEcCCCCEEEEE
Q psy14130 175 HKRRVGYIEWHPTAENVVASAGFD----------YLIILWDVGK------GEALTVID-CHPDVINCLSFNRDGSRLVTT 237 (494)
Q Consensus 175 h~~~V~~~~~~p~~~~~l~s~s~d----------~~v~iwd~~~------~~~~~~~~-~h~~~v~~l~~~~~~~~l~s~ 237 (494)
|...+.+++|+|+| +.|++++.| ..|++||+.+ ++ ...+. .+...+.+++|+|||++|+.+
T Consensus 128 ~~~~~~~~~~spDg-~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~SpDG~~la~~ 205 (662)
T 3azo_A 128 GGLRWADPVLLPER-GEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSA-VRELSDDAHRFVTGPRLSPDGRQAVWL 205 (662)
T ss_dssp TCEEEEEEEEETTT-TEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGG-SEESSCSCSSEECCCEECTTSSEEEEE
T ss_pred CCccccCcEECCCC-CEEEEEEecccCCCCCCceeEEEEEECCCCccccCCc-eeEEEecCCCcccCceECCCCCEEEEE
Confidence 67789999999999 688888776 5899999987 54 34555 566788899999999999988
Q ss_pred eCC--------CeEEEEeCC-CC---ceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCc--eEEEEeCCCCCCcee
Q psy14130 238 CKD--------KTVRVLDPR-TG---LVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDR--QVGLWDENDLNTPLA 303 (494)
Q Consensus 238 ~~d--------~~v~iwd~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~--~i~iwd~~~~~~~~~ 303 (494)
+.+ ..|++||+. ++ +.......+... +..+.|+|++. +++++ ..++ .|.+||+.+... ..
T Consensus 206 ~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~-~~~~~~spdg~-l~~~~---~~~~~~~l~~~~~~~~~~-~~ 279 (662)
T 3azo_A 206 AWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEA-IAQAEWAPDGS-LIVAT---DRTGWWNLHRVDPATGAA-TQ 279 (662)
T ss_dssp EECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBC-EEEEEECTTSC-EEEEE---CTTSSCEEEEECTTTCCE-EE
T ss_pred ECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCce-EcceEECCCCe-EEEEE---CCCCCeEEEEEECCCCce-ee
Confidence 755 379999999 57 333333444444 78899999966 77777 5677 677777654332 11
Q ss_pred EeeecCCC---------ceEEeEEeCCCCEEEEEEeCCCcEEEEEee--CCCceEEecccccCCCCeeEE-EEecCCcee
Q psy14130 304 LETVDSSS---------GVLFPYYDHDTRILFLAGKGDGNIRYYELT--NERPYIHFLNQSLSGAPQRGL-GFMPKRGCD 371 (494)
Q Consensus 304 ~~~~~~~~---------~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~--~~~~~~~~~~~~~~~~~v~~~-~~~p~~~~~ 371 (494)
+. .+.. .+..++|+|+++.+ +++.. +.+++|.+. +++ ...+... ...+..+ ++.+++.++
T Consensus 280 l~--~~~~~~~~p~w~~~~~~~~~~~~~~~~-~~~~~-~~~~l~~~d~~~~~--~~~l~~~--~~~~~~~~s~~~~~~~~ 351 (662)
T 3azo_A 280 LC--RREEEFAGPLWTPGMRWFAPLANGLIA-VVHGK-GAAVLGILDPESGE--LVDAAGP--WTEWAATLTVSGTRAVG 351 (662)
T ss_dssp SS--CCSSBSSCCCCSTTCCSEEECTTSCEE-EEEBS-SSCEEEEEETTTTE--EEECCSS--CCEEEEEEEEETTEEEE
T ss_pred cc--cccccccCccccccCceEeEeCCCEEE-EEEEc-CccEEEEEECCCCc--EEEecCC--CCeEEEEEecCCCEEEE
Confidence 11 1111 14567888998877 66767 999999655 343 2333322 3456666 555554444
Q ss_pred eec--cceeEEEEeeC
Q psy14130 372 VTQ--CEIFRFFKLHT 385 (494)
Q Consensus 372 ~~~--~~~~~~~~l~~ 385 (494)
++. +...++|.+..
T Consensus 352 ~~~~~~~~~~i~~~d~ 367 (662)
T 3azo_A 352 VAASPRTAYEVVELDT 367 (662)
T ss_dssp EEEETTEEEEEEEEET
T ss_pred EEcCCCCCCEEEEEEC
Confidence 443 55567777664
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.64 E-value=4.2e-14 Score=149.05 Aligned_cols=220 Identities=10% Similarity=0.094 Sum_probs=136.1
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEE-ecCCCCce------
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTV-IDCHPDVI------ 222 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~-~~~h~~~v------ 222 (494)
.+.+||+.++.. ..+..|...+...+|||+| +.||.++ |+.|++||+.+++..+. ..++...+
T Consensus 93 ~~~~~d~~~~~~--------~~l~~~~~~~~~~~~SPdG-~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~ 162 (740)
T 4a5s_A 93 SYDIYDLNKRQL--------ITEERIPNNTQWVTWSPVG-HKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITD 162 (740)
T ss_dssp EEEEEETTTTEE--------CCSSCCCTTEEEEEECSST-TCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCC
T ss_pred EEEEEECCCCcE--------EEcccCCCcceeeEECCCC-CEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCccc
Confidence 578999998732 2456678889999999999 5777775 68999999988775432 22333323
Q ss_pred -----------EEEEEcCCCCEEEEEeCCC------------------------------------eEEEEeCCC---Cc
Q psy14130 223 -----------NCLSFNRDGSRLVTTCKDK------------------------------------TVRVLDPRT---GL 252 (494)
Q Consensus 223 -----------~~l~~~~~~~~l~s~~~d~------------------------------------~v~iwd~~~---~~ 252 (494)
.++.|+|||+.|+.++.|. +|++||+.+ ++
T Consensus 163 ~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~ 242 (740)
T 4a5s_A 163 WVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVT 242 (740)
T ss_dssp HHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSS
T ss_pred ccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCC
Confidence 3589999999999876321 588899988 73
Q ss_pred --eEEEeee------cCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCC----C--ceeEeeecCCCce-----
Q psy14130 253 --VISQGVC------HPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLN----T--PLALETVDSSSGV----- 313 (494)
Q Consensus 253 --~~~~~~~------~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~----~--~~~~~~~~~~~~v----- 313 (494)
....+.. |... +..+.|+|++..++........+..|.+||+.++. . ...+....+...+
T Consensus 243 ~~~~~~l~~~~~~~~~~~~-~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~ 321 (740)
T 4a5s_A 243 NATSIQITAPASMLIGDHY-LCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRP 321 (740)
T ss_dssp CCCEEEECCCHHHHTSCEE-EEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSC
T ss_pred cceEEEecCCccCCCCCeE-EEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcC
Confidence 2233332 4444 78899999955444443212334579999998765 1 1112111222222
Q ss_pred EEeEEeCCCCEEE-EEEeCCC--cEEEEEeeCCCceEEecccccCCCCeeEEEEecCCc-eeeecc------ceeEEEEe
Q psy14130 314 LFPYYDHDTRILF-LAGKGDG--NIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRG-CDVTQC------EIFRFFKL 383 (494)
Q Consensus 314 ~~~~~~~~~~~l~-~~g~~dg--~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~-~~~~~~------~~~~~~~l 383 (494)
..+.|+|||+.|+ .....+| .|++||+.+++. .. +... ...+..+.. +++. +...+. ....+|.+
T Consensus 322 ~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~-~~-lT~g--~~~v~~~~~-~d~~~i~f~~~~~~~~~~~~~ly~v 396 (740)
T 4a5s_A 322 SEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDC-TF-ITKG--TWEVIGIEA-LTSDYLYYISNEYKGMPGGRNLYKI 396 (740)
T ss_dssp CCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSC-EE-SCCS--SSCEEEEEE-ECSSEEEEEESCGGGCTTCBEEEEE
T ss_pred CCceEcCCCCEEEEEEEcCCCceEEEEEECCCCce-Ee-cccC--CEEEEEEEE-EeCCEEEEEEecCCCCCceeEEEEE
Confidence 3689999999885 3433444 477778776654 22 2221 234555432 3343 333332 24677777
Q ss_pred eC
Q psy14130 384 HT 385 (494)
Q Consensus 384 ~~ 385 (494)
..
T Consensus 397 ~~ 398 (740)
T 4a5s_A 397 QL 398 (740)
T ss_dssp ET
T ss_pred EC
Confidence 65
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.64 E-value=1.6e-14 Score=148.00 Aligned_cols=212 Identities=11% Similarity=0.003 Sum_probs=141.5
Q ss_pred cCcEEEEEcCCCCCCCCcccceEeccccc-ccEEEEEEcCCCCCEEEEEeC---CCeEEEEECCC---CeEEEEecCCCC
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHK-RRVGYIEWHPTAENVVASAGF---DYLIILWDVGK---GEALTVIDCHPD 220 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~-~~V~~~~~~p~~~~~l~s~s~---d~~v~iwd~~~---~~~~~~~~~h~~ 220 (494)
.++++||++.++ +. ..+..|. ..|.+++|+|+ +++++++. +...++|.+.. +... .+... .
T Consensus 43 ~g~~~lw~~~~g-------~~-~~lt~~~~~~~~~~~~spd--~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~-~ 110 (582)
T 3o4h_A 43 EGSVNAYLYDGG-------ET-VKLNREPINSVLDPHYGVG--RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEAV-K 110 (582)
T ss_dssp TTEEEEEEEETT-------EE-EECCSSCCSEECEECTTCS--EEEEEEECSTTSCCEEEEEEETTSTTCCE-ECTTS-C
T ss_pred CCceeEEEEcCC-------Cc-EeeecccccccccccCCCC--eEEEEeccCCCCcceEEEEEeccCCCccc-cccCC-C
Confidence 457999998654 33 3444455 68999999998 58887775 45556654432 2222 44322 2
Q ss_pred ceEEEEEcCCCCE-EEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCC
Q psy14130 221 VINCLSFNRDGSR-LVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLN 299 (494)
Q Consensus 221 ~v~~l~~~~~~~~-l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~ 299 (494)
.+...+|+|+|+. +++++.++.+.+||+.+++.......+. ....|+|++..+++++......+.|++||+.+..
T Consensus 111 ~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~----~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~ 186 (582)
T 3o4h_A 111 PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG----FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGG 186 (582)
T ss_dssp SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS----CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCC
T ss_pred CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC----ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCC
Confidence 3446688888753 3334444455599999887655444332 6788999976666565211112789999998755
Q ss_pred CceeEeeecCCCceEEeEEeCCCCEEEEEEeCCC--cEEEEEeeCCCceEEecccccCCCCeeEEE--------EecCCc
Q psy14130 300 TPLALETVDSSSGVLFPYYDHDTRILFLAGKGDG--NIRYYELTNERPYIHFLNQSLSGAPQRGLG--------FMPKRG 369 (494)
Q Consensus 300 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg--~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~--------~~p~~~ 369 (494)
.. .+ ..+...+..++|+|||+.| +++..++ .|++||+.+++.. .+..+ ...+.+++ |+|||.
T Consensus 187 ~~-~l--~~~~~~~~~~~~SpDG~~l-~~~~~~~~~~i~~~d~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~spdg~ 258 (582)
T 3o4h_A 187 LR-VF--DSGEGSFSSASISPGMKVT-AGLETAREARLVTVDPRDGSVE--DLELP--SKDFSSYRPTAITWLGYLPDGR 258 (582)
T ss_dssp CE-EE--CCSSCEEEEEEECTTSCEE-EEEECSSCEEEEEECTTTCCEE--ECCCS--CSHHHHHCCSEEEEEEECTTSC
T ss_pred ce-Ee--ecCCCccccceECCCCCEE-EEccCCCeeEEEEEcCCCCcEE--EccCC--CcChhhhhhccccceeEcCCCc
Confidence 32 22 2355678999999999999 5777888 8999999988764 33322 33455566 999996
Q ss_pred eeeec--cceeEEEEe
Q psy14130 370 CDVTQ--CEIFRFFKL 383 (494)
Q Consensus 370 ~~~~~--~~~~~~~~l 383 (494)
++++. ++.+++|++
T Consensus 259 ~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 259 LAVVARREGRSAVFID 274 (582)
T ss_dssp EEEEEEETTEEEEEET
T ss_pred EEEEEEcCCcEEEEEE
Confidence 66554 889999998
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.64 E-value=3.2e-15 Score=157.36 Aligned_cols=224 Identities=10% Similarity=0.014 Sum_probs=144.3
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccc---cEEEEEEcCCCCCEEEEEeC---------CCeEEEEECCCCeEEEEec
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKR---RVGYIEWHPTAENVVASAGF---------DYLIILWDVGKGEALTVID 216 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~---~V~~~~~~p~~~~~l~s~s~---------d~~v~iwd~~~~~~~~~~~ 216 (494)
++|++||+.++ +....+.+|.. .|.+++|+|+| +.|++++. |+.|++||+.+++.+....
T Consensus 36 ~~i~~~~~~~g-------~~~~~~~~~~~~~~~~~~~~~SpDg-~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~ 107 (719)
T 1z68_A 36 NNIVLYNIETG-------QSYTILSNRTMKSVNASNYGLSPDR-QFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNE 107 (719)
T ss_dssp SCEEEEESSSC-------CEEEEECHHHHHTTTCSEEEECTTS-SEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSC
T ss_pred CCEEEEEcCCC-------cEEEEEccccccccceeeEEECCCC-CeEEEEecCceeEEeecceEEEEEECCCCcccccee
Confidence 47999999988 44445554543 38999999999 68888776 7899999999987621111
Q ss_pred CCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEe-eecCCC----------------CceEEEEECCCCeEEE
Q psy14130 217 CHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQG-VCHPGT----------------RSSKAVFIGDTGRIVT 279 (494)
Q Consensus 217 ~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~-~~~~~~----------------~~~~~~~~~~~~~l~~ 279 (494)
....+.+++|+|||+.|+++. |+.|++||+.+++..+.. .++... ....+.|+|++..|++
T Consensus 108 -l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~ 185 (719)
T 1z68_A 108 -LPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAY 185 (719)
T ss_dssp -CCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEE
T ss_pred -cCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEE
Confidence 235688999999999999986 789999999988765432 222211 1247999999777776
Q ss_pred EEecCC------------------------------CCceEEEEeCCCCCCc--eeEe----eecCCCceEEeEEeCCCC
Q psy14130 280 TGFSRH------------------------------SDRQVGLWDENDLNTP--LALE----TVDSSSGVLFPYYDHDTR 323 (494)
Q Consensus 280 ~g~~~~------------------------------~d~~i~iwd~~~~~~~--~~~~----~~~~~~~v~~~~~~~~~~ 323 (494)
++.... ....|++||+.+.... ..+. ...+...+..++|+||++
T Consensus 186 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~ 265 (719)
T 1z68_A 186 AEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDER 265 (719)
T ss_dssp EEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSE
T ss_pred EEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCe
Confidence 663211 1127899998864321 1110 012445688999999976
Q ss_pred EEEEEEeCC----CcEEEEE----eeCCCceEEecc--cccCCCCee-----EEEEecCCceeee----ccceeEEEEee
Q psy14130 324 ILFLAGKGD----GNIRYYE----LTNERPYIHFLN--QSLSGAPQR-----GLGFMPKRGCDVT----QCEIFRFFKLH 384 (494)
Q Consensus 324 ~l~~~g~~d----g~i~~wd----~~~~~~~~~~~~--~~~~~~~v~-----~~~~~p~~~~~~~----~~~~~~~~~l~ 384 (494)
.+ ++.... ..|.+|| +.+++.. ..+. ...+...+. .++|+|+|..++. .++..++|.+.
T Consensus 266 ~~-~~~~~~~~~~~~l~~~d~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~ 343 (719)
T 1z68_A 266 VC-LQWLKRVQNVSVLSICDFREDWQTWDCP-KTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIK 343 (719)
T ss_dssp EE-EEEEESSTTEEEEEEEEECSSSSSEECC-GGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEES
T ss_pred EE-EEEeccccCeEEEEEEcccCCCCCCceE-EEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEE
Confidence 65 553322 2488888 6665532 1111 012233444 7899999985432 35555555443
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.63 E-value=2.8e-14 Score=150.44 Aligned_cols=234 Identities=7% Similarity=0.013 Sum_probs=150.6
Q ss_pred cEEEEEEcCcEEEEEcCCCCCCCCcccceEeccccccc-----EEEEEEcCCCCCEEEEEeCC---------CeEEEEEC
Q psy14130 141 GAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRR-----VGYIEWHPTAENVVASAGFD---------YLIILWDV 206 (494)
Q Consensus 141 g~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~-----V~~~~~~p~~~~~l~s~s~d---------~~v~iwd~ 206 (494)
|.+++...++|++||+.++ +....+.+|... ...++|||+| +.|+.++.+ +.+.+||+
T Consensus 28 g~~~~~~~~~i~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~Spdg-~~l~~~~~~~~~~r~~~~~~~~~~d~ 99 (740)
T 4a5s_A 28 HEYLYKQENNILVFNAEYG-------NSSVFLENSTFDEFGHSINDYSISPDG-QFILLEYNYVKQWRHSYTASYDIYDL 99 (740)
T ss_dssp SEEEEEETTEEEEEETTTC-------CEEEEECTTTTTTCCSCCCEEEECTTS-SEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred CcEEEEcCCcEEEEECCCC-------ceEEEEechhhhhhcccccceEECCCC-CEEEEEECCeeeEEEccceEEEEEEC
Confidence 3444444568999999988 444555666532 2457899999 688888776 56679999
Q ss_pred CCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEe-eecCCC----------------CceEEE
Q psy14130 207 GKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQG-VCHPGT----------------RSSKAV 269 (494)
Q Consensus 207 ~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~-~~~~~~----------------~~~~~~ 269 (494)
.+++.. .+..|.+.+...+|||||+.|+.+. |+.|++||+.+++..+.. .++... ....+.
T Consensus 100 ~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~ 177 (740)
T 4a5s_A 100 NKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALW 177 (740)
T ss_dssp TTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEE
T ss_pred CCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceE
Confidence 998754 4667888999999999999999885 689999999988754321 222211 123488
Q ss_pred EECCCCeEEEEEecCC--------------------------------CCceEEEEeCCC---CCC--ceeEeee----c
Q psy14130 270 FIGDTGRIVTTGFSRH--------------------------------SDRQVGLWDEND---LNT--PLALETV----D 308 (494)
Q Consensus 270 ~~~~~~~l~~~g~~~~--------------------------------~d~~i~iwd~~~---~~~--~~~~~~~----~ 308 (494)
|+|++..|+.+.+..+ ...+|++||+.+ ... ...+... .
T Consensus 178 wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~ 257 (740)
T 4a5s_A 178 WSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLI 257 (740)
T ss_dssp ECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHT
T ss_pred ECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCC
Confidence 9999777777653211 012688899887 532 1111110 1
Q ss_pred CCCceEEeEEeCCCCEEEEEEeC---CCcEEEEEeeCCCc------eEEecccccCCCC-----eeEEEEecCCceee-e
Q psy14130 309 SSSGVLFPYYDHDTRILFLAGKG---DGNIRYYELTNERP------YIHFLNQSLSGAP-----QRGLGFMPKRGCDV-T 373 (494)
Q Consensus 309 ~~~~v~~~~~~~~~~~l~~~g~~---dg~i~~wd~~~~~~------~~~~~~~~~~~~~-----v~~~~~~p~~~~~~-~ 373 (494)
+...+..++|+|||+.++..... +..|++||+.+++. ...... ..+... ....+|+|||..++ .
T Consensus 258 ~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~-~~~~~~v~~~~~~~p~fspDG~~l~~~ 336 (740)
T 4a5s_A 258 GDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIE-MSTTGWVGRFRPSEPHFTLDGNSFYKI 336 (740)
T ss_dssp SCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEE-ECSSSCSSSSSCCCCEECTTSSEEEEE
T ss_pred CCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeee-ccCCceEccCcCCCceEcCCCCEEEEE
Confidence 44568889999999966444332 34699999999871 111100 111222 23788999998554 2
Q ss_pred ---ccc--eeEEEEeeC
Q psy14130 374 ---QCE--IFRFFKLHT 385 (494)
Q Consensus 374 ---~~~--~~~~~~l~~ 385 (494)
.++ .+.+|++..
T Consensus 337 ~s~~~G~~~l~~~~~~~ 353 (740)
T 4a5s_A 337 ISNEEGYRHICYFQIDK 353 (740)
T ss_dssp EECTTSCEEEEEEETTC
T ss_pred EEcCCCceEEEEEECCC
Confidence 233 455555443
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=99.62 E-value=8.7e-13 Score=122.08 Aligned_cols=217 Identities=11% Similarity=0.158 Sum_probs=150.4
Q ss_pred CcEEEEEcCCCCCCCCcccceEec------ccccccEEEEEE-cCCCCCEEEEEeC-CCeEEEEECCCCeEEEEec-CCC
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDL------HGHKRRVGYIEW-HPTAENVVASAGF-DYLIILWDVGKGEALTVID-CHP 219 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~------~~h~~~V~~~~~-~p~~~~~l~s~s~-d~~v~iwd~~~~~~~~~~~-~h~ 219 (494)
+.|.+||.. +. .+..+ .+|...+.++++ .+++ +++++... ++.|.+|| .+++.+..+. .+.
T Consensus 51 ~~i~~~d~~-g~-------~~~~~~~~~~~~~~~~~p~~i~~~~~~g-~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~ 120 (286)
T 1q7f_A 51 HRIQIFDKE-GR-------FKFQFGECGKRDSQLLYPNRVAVVRNSG-DIIVTERSPTHQIQIYN-QYGQFVRKFGATIL 120 (286)
T ss_dssp TEEEEECTT-SC-------EEEEECCBSSSTTCBSSEEEEEEETTTT-EEEEEECGGGCEEEEEC-TTSCEEEEECTTTC
T ss_pred CEEEEECCC-Cc-------EEEEecccCCCcccccCceEEEEEcCCC-eEEEEcCCCCCEEEEEC-CCCcEEEEecCccC
Confidence 468999876 32 22222 235567899999 4666 56666643 78999999 5677666664 344
Q ss_pred CceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeee--cCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCC
Q psy14130 220 DVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVC--HPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEND 297 (494)
Q Consensus 220 ~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~ 297 (494)
..+.+++++++|+++++...++.|.+||.. ++.+..+.. +.. .+..+++.++ +.++++. ..++.|++||...
T Consensus 121 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~-~p~~i~~~~~-g~l~v~~---~~~~~i~~~~~~g 194 (286)
T 1q7f_A 121 QHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLE-FPNGVVVNDK-QEIFISD---NRAHCVKVFNYEG 194 (286)
T ss_dssp SCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCS-SEEEEEECSS-SEEEEEE---GGGTEEEEEETTC
T ss_pred CCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccC-CcEEEEECCC-CCEEEEE---CCCCEEEEEcCCC
Confidence 678999999999988888888999999965 565655542 222 3788889887 6688877 5789999999753
Q ss_pred CCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCC-cEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec-c
Q psy14130 298 LNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDG-NIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ-C 375 (494)
Q Consensus 298 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg-~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~-~ 375 (494)
.....+........+..++++++|+.+ ++...++ .|.+||. +++.+..+. .......+.+++++|++.++++. +
T Consensus 195 -~~~~~~~~~g~~~~p~~i~~d~~G~l~-v~~~~~~~~i~~~~~-~g~~~~~~~-~~~~~~~~~~i~~~~~g~l~vs~~~ 270 (286)
T 1q7f_A 195 -QYLRQIGGEGITNYPIGVGINSNGEIL-IADNHNNFNLTIFTQ-DGQLISALE-SKVKHAQCFDVALMDDGSVVLASKD 270 (286)
T ss_dssp -CEEEEESCTTTSCSEEEEEECTTCCEE-EEECSSSCEEEEECT-TSCEEEEEE-ESSCCSCEEEEEEETTTEEEEEETT
T ss_pred -CEEEEEccCCccCCCcEEEECCCCCEE-EEeCCCCEEEEEECC-CCCEEEEEc-ccCCCCcceeEEECCCCcEEEECCC
Confidence 221111111112567889999999766 7777775 9999995 444433332 22223347899999999888775 7
Q ss_pred ceeEEEEeeC
Q psy14130 376 EIFRFFKLHT 385 (494)
Q Consensus 376 ~~~~~~~l~~ 385 (494)
+.+++|++..
T Consensus 271 ~~v~v~~~~~ 280 (286)
T 1q7f_A 271 YRLYIYRYVQ 280 (286)
T ss_dssp TEEEEEECSC
T ss_pred CeEEEEEccc
Confidence 8899998765
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.1e-13 Score=134.06 Aligned_cols=223 Identities=12% Similarity=0.016 Sum_probs=146.5
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEE--E
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLS--F 227 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~--~ 227 (494)
.|.+||+.++ +......++...+..+.|+|++ +.|+.++.++.|++||+.+++....+..+...+.... +
T Consensus 61 ~l~~~d~~~g-------~~~~lt~~~~~~~~~~~~spdg-~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 132 (388)
T 3pe7_A 61 NYYLLDLNTQ-------VATQLTEGRGDNTFGGFLSPDD-DALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVA 132 (388)
T ss_dssp EEEEEETTTC-------EEEECCCSSCBCSSSCEECTTS-SEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEE
T ss_pred eEEEEeCCCC-------ceEEeeeCCCCCccceEEcCCC-CEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeE
Confidence 4888898877 4445555666666678899999 6899999999999999999987777776666665444 4
Q ss_pred cCCCCEEEEEe----------------------CCCeEEEEeCCCCceEEEeeecCCCCceEEEEEC-CCCeEEEEEecC
Q psy14130 228 NRDGSRLVTTC----------------------KDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIG-DTGRIVTTGFSR 284 (494)
Q Consensus 228 ~~~~~~l~s~~----------------------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~g~~~ 284 (494)
++++++++... .+..|.+||+.+++.. .+..+... +..+.|+| ++..++.+....
T Consensus 133 ~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~-~l~~~~~~-~~~~~~sp~dg~~l~~~~~~~ 210 (388)
T 3pe7_A 133 NSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGEST-VILQENQW-LGHPIYRPYDDSTVAFCHEGP 210 (388)
T ss_dssp CTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEE-EEEEESSC-EEEEEEETTEEEEEEEEECSC
T ss_pred CCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceE-EeecCCcc-ccccEECCCCCCEEEEEEecC
Confidence 89999887532 4478999999998754 34444444 78899999 866666665100
Q ss_pred C--CCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCC----cEEEEEeeCCCceEEecccccCC--
Q psy14130 285 H--SDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDG----NIRYYELTNERPYIHFLNQSLSG-- 356 (494)
Q Consensus 285 ~--~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg----~i~~wd~~~~~~~~~~~~~~~~~-- 356 (494)
. ....|.++|+..... ..+........+..+.|+|||+.|+.++..++ .|++||+.+++.. .+......
T Consensus 211 ~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~--~l~~~~~~~~ 287 (388)
T 3pe7_A 211 HDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENR--QLTSMPACSH 287 (388)
T ss_dssp TTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEE--EEEEECCEEE
T ss_pred CCCCcceEEEEeCCCCce-EEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceE--EEEcCCCcee
Confidence 0 034788888765332 22211111124778899999998744443332 3999999988742 12111110
Q ss_pred --CCeeEEEEecCCceeee-----------ccceeEEEEeeC
Q psy14130 357 --APQRGLGFMPKRGCDVT-----------QCEIFRFFKLHT 385 (494)
Q Consensus 357 --~~v~~~~~~p~~~~~~~-----------~~~~~~~~~l~~ 385 (494)
....+++|+|||..++. ++..+.+|++..
T Consensus 288 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~ 329 (388)
T 3pe7_A 288 LMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKN 329 (388)
T ss_dssp EEECTTSSEEEEEECCC------------CCCCEEEEEETTT
T ss_pred eeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccC
Confidence 01233479999987763 355778888766
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=99.56 E-value=1.5e-13 Score=133.27 Aligned_cols=194 Identities=11% Similarity=0.120 Sum_probs=123.5
Q ss_pred EEEcCCCCCEEEEE-----eCCCeEEEEECCCCeEEEEecCCCCceEEEEEcC-CCCEEEEEeCC------CeEEEEeCC
Q psy14130 182 IEWHPTAENVVASA-----GFDYLIILWDVGKGEALTVIDCHPDVINCLSFNR-DGSRLVTTCKD------KTVRVLDPR 249 (494)
Q Consensus 182 ~~~~p~~~~~l~s~-----s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~-~~~~l~s~~~d------~~v~iwd~~ 249 (494)
+.|+|++ ..++.+ ..+..|.+||+.+++..... .+...+..+.|+| +++.|+.++.+ ..|.+||+.
T Consensus 147 ~~~spdg-~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~ 224 (396)
T 3c5m_A 147 RDWQPLT-SWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNED 224 (396)
T ss_dssp GGCCCCC-SHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETT
T ss_pred cccCCCC-cceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECC
Confidence 3567777 344433 45678999999988765544 4677899999999 78877776643 468899987
Q ss_pred CCceEEEeeecC-CCCceEEEEECCCCeEEEEEecCC-CCceEEEEeCCCCCCceeEeeecCCCceEEeEEeC-CCCEEE
Q psy14130 250 TGLVISQGVCHP-GTRSSKAVFIGDTGRIVTTGFSRH-SDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDH-DTRILF 326 (494)
Q Consensus 250 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~g~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~ 326 (494)
.++... +..+. ...+..+.|+|++..++.++.... .++.|++||+.+... ..+.... ... +.|+| ||+.++
T Consensus 225 ~~~~~~-l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~-~~l~~~~---~~~-~~~s~~dg~~l~ 298 (396)
T 3c5m_A 225 GSNVRK-IKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLEN-EEVMVMP---PCS-HLMSNFDGSLMV 298 (396)
T ss_dssp SCCCEE-SSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCE-EEEEECC---SEE-EEEECSSSSEEE
T ss_pred CCceeE-eeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCe-EEeeeCC---CCC-CCccCCCCceEE
Confidence 665333 32232 223667899999777777763111 125599999987543 2222221 233 88999 999774
Q ss_pred EEEe---------------CCCcEEEEEeeCCCceEEecccccCC---------CCeeEEEEecCCceeeec---cceeE
Q psy14130 327 LAGK---------------GDGNIRYYELTNERPYIHFLNQSLSG---------APQRGLGFMPKRGCDVTQ---CEIFR 379 (494)
Q Consensus 327 ~~g~---------------~dg~i~~wd~~~~~~~~~~~~~~~~~---------~~v~~~~~~p~~~~~~~~---~~~~~ 379 (494)
.+++ .++.|++||+.+++.. .+ ...... ..+..++|+|++..++.. ++...
T Consensus 299 ~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l-~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~ 376 (396)
T 3c5m_A 299 GDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ-KL-CKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPA 376 (396)
T ss_dssp EEECCC----------CCCCCCEEEEEETTTTBCC-EE-EECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCE
T ss_pred EecCCcceeeccccccccCCCCcEEEEecccCceE-Ec-cCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCce
Confidence 4331 3578999999887642 22 211110 025668999999766542 45667
Q ss_pred EEEeeC
Q psy14130 380 FFKLHT 385 (494)
Q Consensus 380 ~~~l~~ 385 (494)
+|.+..
T Consensus 377 l~~~~~ 382 (396)
T 3c5m_A 377 IYIADV 382 (396)
T ss_dssp EEEEEC
T ss_pred EEEEEE
Confidence 777664
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=99.56 E-value=3.1e-12 Score=121.16 Aligned_cols=221 Identities=13% Similarity=0.031 Sum_probs=144.5
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCC----CeEEEEECCCCeEEEEec--CCCCceE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFD----YLIILWDVGKGEALTVID--CHPDVIN 223 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d----~~v~iwd~~~~~~~~~~~--~h~~~v~ 223 (494)
.|.+||..++. .......+...+.+++++|++ ++++++..+ +.|.+||..++.....+. .+...+.
T Consensus 67 ~i~~~d~~~~~-------~~~~~~~~~~~~~~i~~~~dg-~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 138 (333)
T 2dg1_A 67 NIFKINPETKE-------IKRPFVSHKANPAAIKIHKDG-RLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCID 138 (333)
T ss_dssp EEEEECTTTCC-------EEEEEECSSSSEEEEEECTTS-CEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEE
T ss_pred EEEEEeCCCCc-------EEEEeeCCCCCcceEEECCCC-cEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCccc
Confidence 58899887762 222222456789999999998 678777766 689999998776543333 3456799
Q ss_pred EEEEcCCCCEEEEEeC------CCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCC
Q psy14130 224 CLSFNRDGSRLVTTCK------DKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEND 297 (494)
Q Consensus 224 ~l~~~~~~~~l~s~~~------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~ 297 (494)
+++++|+|+++++... .+.|..+|..+++..... .+... +..++|++++..++++. ..++.|.+||+.+
T Consensus 139 ~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~-~~~i~~~~dg~~l~v~~---~~~~~i~~~d~~~ 213 (333)
T 2dg1_A 139 DMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPII-QNISV-ANGIALSTDEKVLWVTE---TTANRLHRIALED 213 (333)
T ss_dssp EEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEE-EEESS-EEEEEECTTSSEEEEEE---GGGTEEEEEEECT
T ss_pred ceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEee-cCCCc-ccceEECCCCCEEEEEe---CCCCeEEEEEecC
Confidence 9999999998887654 356777777665543322 22222 67889999966677776 5688999999864
Q ss_pred C-CCceeE-----eeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEeccccc---CCCCeeEEEEecCC
Q psy14130 298 L-NTPLAL-----ETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSL---SGAPQRGLGFMPKR 368 (494)
Q Consensus 298 ~-~~~~~~-----~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~---~~~~v~~~~~~p~~ 368 (494)
. ...... ........+..++++++|+.+ ++...++.|.+||. .++.+..+..... +...+.+++|+|++
T Consensus 214 ~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~-v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg 291 (333)
T 2dg1_A 214 DGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLY-VAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGT 291 (333)
T ss_dssp TSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEE-EEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTS
T ss_pred CCcCcccccceEEEecCCCCCCCceEECCCCCEE-EEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCC
Confidence 2 221111 111122467789999999866 77777899999998 4544333211100 01157899999997
Q ss_pred cee-eec-cc----eeEEEEeeC
Q psy14130 369 GCD-VTQ-CE----IFRFFKLHT 385 (494)
Q Consensus 369 ~~~-~~~-~~----~~~~~~l~~ 385 (494)
..+ ++. .+ ...+|.+..
T Consensus 292 ~~L~v~~~~g~~~~~~~l~~~~~ 314 (333)
T 2dg1_A 292 NQLIICSNDIEMGGGSMLYTVNG 314 (333)
T ss_dssp CEEEEEEECGGGTCCEEEEEEEC
T ss_pred CEEEEEeCccCCCCCceEEEEec
Confidence 544 443 21 356666654
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=99.56 E-value=1.6e-12 Score=124.62 Aligned_cols=217 Identities=9% Similarity=0.050 Sum_probs=139.3
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEe----------CCCeEEEEECCCCeEEEEecCC-
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAG----------FDYLIILWDVGKGEALTVIDCH- 218 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s----------~d~~v~iwd~~~~~~~~~~~~h- 218 (494)
.|.+||..++ +.+..+..+..+ .++|+|++ ++|+++. .++.|.+||+.+++.+..+...
T Consensus 32 ~v~v~D~~t~-------~~~~~i~~g~~p--~i~~spdg-~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~ 101 (361)
T 2oiz_A 32 RVHVYDYTNG-------KFLGMVPTAFNG--HVQVSNDG-KKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPP 101 (361)
T ss_dssp EEEEEETTTC-------CEEEEEECCEEE--EEEECTTS-SEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECT
T ss_pred eEEEEECCCC-------eEEEEecCCCCC--ceEECCCC-CEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCc
Confidence 6999998887 444555555554 89999999 5777765 3678999999998888777532
Q ss_pred -----CCceEEEEEcCCCCEEEEEeC--CCeEEEEeCCCCceEEE-eeecCCCCceEEEEECCCCeEEEEE---------
Q psy14130 219 -----PDVINCLSFNRDGSRLVTTCK--DKTVRVLDPRTGLVISQ-GVCHPGTRSSKAVFIGDTGRIVTTG--------- 281 (494)
Q Consensus 219 -----~~~v~~l~~~~~~~~l~s~~~--d~~v~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~g--------- 281 (494)
......++++|||++|+++.. ++.|.+||+.+++.+.. +.... ...+.+.|++...+++.
T Consensus 102 ~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~---~~~v~~~p~~~~~~~~~~~dg~~~~v 178 (361)
T 2oiz_A 102 KRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAG---CWSVIPQPNRPRSFMTICGDGGLLTI 178 (361)
T ss_dssp TBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTT---EEEEEECTTSSSEEEEEETTSSEEEE
T ss_pred cccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCC---cceeEEcCCCCeeEEEECCCCcEEEE
Confidence 345678999999999998874 68999999999988776 43211 11112222221111111
Q ss_pred -ecC-----------------------------------CCCceEEEEeCCCCCCceeEeeec--------C---CCceE
Q psy14130 282 -FSR-----------------------------------HSDRQVGLWDENDLNTPLALETVD--------S---SSGVL 314 (494)
Q Consensus 282 -~~~-----------------------------------~~d~~i~iwd~~~~~~~~~~~~~~--------~---~~~v~ 314 (494)
+.. +.++.|.++|+....... ..... . ..+..
T Consensus 179 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~-~~~~~~~~~~~~~~~~~p~g~~ 257 (361)
T 2oiz_A 179 NLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKV-DGPWSLLNDEDKAKNWVPGGYN 257 (361)
T ss_dssp EECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEE-EEEEESCCHHHHHTTCEECCSS
T ss_pred EECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCcee-cccccccCccccccccccCCee
Confidence 000 123445555544321110 00000 0 01122
Q ss_pred EeEEeCCCCEEEEEEe----------CCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec-cceeEEEEe
Q psy14130 315 FPYYDHDTRILFLAGK----------GDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ-CEIFRFFKL 383 (494)
Q Consensus 315 ~~~~~~~~~~l~~~g~----------~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~-~~~~~~~~l 383 (494)
.++++|+++.+|++.. ..+.|.+||+.+++.+..+. .+. +.+++|+|+|..+.+. .+.+.+|++
T Consensus 258 ~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~----~~~-p~~ia~spdg~~l~v~n~~~v~v~D~ 332 (361)
T 2oiz_A 258 LVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIP----GRD-ALSMTIDQQRNLMLTLDGGNVNVYDI 332 (361)
T ss_dssp CEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEE----CTT-CCEEEEETTTTEEEEECSSCEEEEEC
T ss_pred EEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEe----cCC-eeEEEECCCCCEEEEeCCCeEEEEEC
Confidence 3689999999988765 13479999999987654432 234 8999999999876553 578999998
Q ss_pred eC
Q psy14130 384 HT 385 (494)
Q Consensus 384 ~~ 385 (494)
.+
T Consensus 333 ~t 334 (361)
T 2oiz_A 333 SQ 334 (361)
T ss_dssp SS
T ss_pred CC
Confidence 77
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=1.6e-12 Score=136.29 Aligned_cols=221 Identities=9% Similarity=0.023 Sum_probs=143.7
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCe----------------EEEEECCCCeE--
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYL----------------IILWDVGKGEA-- 211 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~----------------v~iwd~~~~~~-- 211 (494)
+|++||+.++ +.......+ ..+.+++|+|+| +.|+.++.++. |++|++.+++.
T Consensus 152 ~i~v~d~~tg-------~~~~~~~~~-~~~~~~~wspDg-~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~ 222 (710)
T 2xdw_A 152 TIKFMKVDGA-------KELPDVLER-VKFSCMAWTHDG-KGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSED 222 (710)
T ss_dssp EEEEEETTTT-------EEEEEEEEE-ECSCCEEECTTS-SEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGC
T ss_pred EEEEEECCCC-------CCCcccccC-cccceEEEEeCC-CEEEEEEECCccccccccccccCCCCEEEEEECCCCcccc
Confidence 5999999887 333222212 236789999999 57777777765 99999988752
Q ss_pred EEEec--CCCCceEEEEEcCCCCEEEEEeC-----CCeEEEEeCCC------Cc-eEEEeeecCCCCceEEEEECCCCeE
Q psy14130 212 LTVID--CHPDVINCLSFNRDGSRLVTTCK-----DKTVRVLDPRT------GL-VISQGVCHPGTRSSKAVFIGDTGRI 277 (494)
Q Consensus 212 ~~~~~--~h~~~v~~l~~~~~~~~l~s~~~-----d~~v~iwd~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~~l 277 (494)
...+. .|...+.++.|+|||++|+.++. +..|.+||+.+ +. ....+..+... .. ..|+++++.+
T Consensus 223 ~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~-~~-~~~s~dg~~l 300 (710)
T 2xdw_A 223 ILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEG-EY-DYVTNEGTVF 300 (710)
T ss_dssp EEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSS-CE-EEEEEETTEE
T ss_pred eEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCc-EE-EEEeccCCEE
Confidence 22233 35666889999999999988765 67899999986 53 35566666554 33 3578888888
Q ss_pred EEEEecCCCCceEEEEeCCCCCCceeEeeecCCC--ceEEeEEeCCCCEEEEEEeCCCcE--EEEEeeCCCceEEecccc
Q psy14130 278 VTTGFSRHSDRQVGLWDENDLNTPLALETVDSSS--GVLFPYYDHDTRILFLAGKGDGNI--RYYELTNERPYIHFLNQS 353 (494)
Q Consensus 278 ~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~g~~dg~i--~~wd~~~~~~~~~~~~~~ 353 (494)
+..+........|.+||+.+...........+.. .+..+.|++++. ++++...|+.. .+||+.+++.... +...
T Consensus 301 ~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-lv~~~~~~g~~~l~~~~~~~g~~~~~-l~~~ 378 (710)
T 2xdw_A 301 TFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNF-LVLCYLHDVKNTLQLHDLATGALLKI-FPLE 378 (710)
T ss_dssp EEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTE-EEEEEEETTEEEEEEEETTTCCEEEE-ECCC
T ss_pred EEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCE-EEEEEEECCEEEEEEEECCCCCEEEe-cCCC
Confidence 8877211224579999998753211111122322 566788886554 54888888864 5556656664333 2221
Q ss_pred cCCCCeeEEEEecCCceeee---c---cceeEEEEeeC
Q psy14130 354 LSGAPQRGLGFMPKRGCDVT---Q---CEIFRFFKLHT 385 (494)
Q Consensus 354 ~~~~~v~~~~~~p~~~~~~~---~---~~~~~~~~l~~ 385 (494)
...+.+++++|++..++. + ...+..|++.+
T Consensus 379 --~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~t 414 (710)
T 2xdw_A 379 --VGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTK 414 (710)
T ss_dssp --SSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTS
T ss_pred --CceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCC
Confidence 456888999998864442 1 35677777765
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=4.7e-12 Score=119.78 Aligned_cols=203 Identities=14% Similarity=0.063 Sum_probs=145.4
Q ss_pred cccEEEEEEcCCCCCEEEEEeCC------------------------CeEEEEECCCCeEEEEec-CCCCceEEEEEcCC
Q psy14130 176 KRRVGYIEWHPTAENVVASAGFD------------------------YLIILWDVGKGEALTVID-CHPDVINCLSFNRD 230 (494)
Q Consensus 176 ~~~V~~~~~~p~~~~~l~s~s~d------------------------~~v~iwd~~~~~~~~~~~-~h~~~v~~l~~~~~ 230 (494)
-..+.+++++|+| +++++.+.+ ++|.+||..+++.+..+. ++-.....++++++
T Consensus 23 l~~v~~va~d~~G-~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~ 101 (329)
T 3fvz_A 23 PGQVSGVALDSKN-NLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTD 101 (329)
T ss_dssp CSCEEEEEECTTC-CEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTT
T ss_pred cCCceEEEECCCC-CEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCC
Confidence 4668999999998 688888877 479999999888776664 45567899999999
Q ss_pred CCEEEEEeCCCeEEEEeCCCCc-eEEEee---------ecCCCCceEEEEECCCCeEEEEEecCC-CCceEEEEeCCCCC
Q psy14130 231 GSRLVTTCKDKTVRVLDPRTGL-VISQGV---------CHPGTRSSKAVFIGDTGRIVTTGFSRH-SDRQVGLWDENDLN 299 (494)
Q Consensus 231 ~~~l~s~~~d~~v~iwd~~~~~-~~~~~~---------~~~~~~~~~~~~~~~~~~l~~~g~~~~-~d~~i~iwd~~~~~ 299 (494)
|+++++...++.|++||..... .+..+. .+.. .+..+++.++++.++++. + .++.|++||.. +.
T Consensus 102 g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~-~P~~ia~~~~~g~lyv~d---~~~~~~I~~~~~~-g~ 176 (329)
T 3fvz_A 102 GNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFC-QPTDVAVEPSTGAVFVSD---GYCNSRIVQFSPS-GK 176 (329)
T ss_dssp SCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCS-SEEEEEECTTTCCEEEEE---CSSCCEEEEECTT-SC
T ss_pred CCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccC-CCcEEEEeCCCCeEEEEe---CCCCCeEEEEcCC-CC
Confidence 9988888889999999986542 444442 2222 378899999557888887 5 58999999943 23
Q ss_pred CceeEeeec--------CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEec-----
Q psy14130 300 TPLALETVD--------SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMP----- 366 (494)
Q Consensus 300 ~~~~~~~~~--------~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p----- 366 (494)
....+.... .......++++|++..||++...++.|++||..+++.+..+ ........+.+++|+|
T Consensus 177 ~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~-~~~~~~~~~~~~~~~pg~~~~ 255 (329)
T 3fvz_A 177 FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREI-KHASFGRNVFAISYIPGFLFA 255 (329)
T ss_dssp EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEE-CCTTTTTCEEEEEEETTEEEE
T ss_pred EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEE-eccccCCCcceeeecCCEEEE
Confidence 222221111 11237889999997777799999999999999988765443 2223356688999999
Q ss_pred -CCceeeec--cceeEEEEeeC
Q psy14130 367 -KRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 367 -~~~~~~~~--~~~~~~~~l~~ 385 (494)
++...++. +..+++|++..
T Consensus 256 ~~g~~~v~~~~~~~v~~~~~~~ 277 (329)
T 3fvz_A 256 VNGKPYFGDQEPVQGFVMNFSS 277 (329)
T ss_dssp EECCCCTTCSCCCCEEEEETTT
T ss_pred eCCCEEeccCCCcEEEEEEcCC
Confidence 33333332 33677777665
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=1.4e-11 Score=124.43 Aligned_cols=222 Identities=12% Similarity=0.047 Sum_probs=162.3
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECC--CCeEEEEecCCCCceEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVG--KGEALTVIDCHPDVINCLS 226 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~--~~~~~~~~~~h~~~v~~l~ 226 (494)
++|.++|..++ +.+..+. ....+..+.|+|+| +++++++.|+.|.+||+. +++.+..+.. ......++
T Consensus 177 ~~V~viD~~t~-------~v~~~i~-~g~~p~~v~~SpDG-r~lyv~~~dg~V~viD~~~~t~~~v~~i~~-G~~P~~ia 246 (567)
T 1qks_A 177 GQIALIDGSTY-------EIKTVLD-TGYAVHISRLSASG-RYLFVIGRDGKVNMIDLWMKEPTTVAEIKI-GSEARSIE 246 (567)
T ss_dssp TEEEEEETTTC-------CEEEEEE-CSSCEEEEEECTTS-CEEEEEETTSEEEEEETTSSSCCEEEEEEC-CSEEEEEE
T ss_pred CeEEEEECCCC-------eEEEEEe-CCCCccceEECCCC-CEEEEEcCCCeEEEEECCCCCCcEeEEEec-CCCCceeE
Confidence 36999999988 4444444 23356799999999 688888999999999995 7788888874 34568999
Q ss_pred Ec----CCCCEEEEEeC-CCeEEEEeCCCCceEEEeee----------cCCCCceEEEEECCCCeEEEEEecCCCCceEE
Q psy14130 227 FN----RDGSRLVTTCK-DKTVRVLDPRTGLVISQGVC----------HPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVG 291 (494)
Q Consensus 227 ~~----~~~~~l~s~~~-d~~v~iwd~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~ 291 (494)
|+ |||++++++.. +++|.++|..+.+.+..+.. |...++..+..++++..+++.- ...|.|.
T Consensus 247 ~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~---~~~g~v~ 323 (567)
T 1qks_A 247 TSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV---KETGKIL 323 (567)
T ss_dssp ECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEE---TTTTEEE
T ss_pred EccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEe---cCCCeEE
Confidence 99 69998887764 59999999999998877653 2233467788888766666666 6789999
Q ss_pred EEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEeccc-ccCCCCeeEEE-EecC-C
Q psy14130 292 LWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQ-SLSGAPQRGLG-FMPK-R 368 (494)
Q Consensus 292 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~-~~~~~~v~~~~-~~p~-~ 368 (494)
++|..+... .....+........+.|+|++++++++...++.|.++|+.+++..... .. -....+-+++. ++|+ +
T Consensus 324 ~vd~~~~~~-~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i-~vgg~~Phpg~g~~~~~p~~g 401 (567)
T 1qks_A 324 LVDYTDLNN-LKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIE-DTGGQTPHPGRGANFVHPTFG 401 (567)
T ss_dssp EEETTCSSE-EEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEE-ECSSSSBCCTTCEEEEETTTE
T ss_pred EEecCCCcc-ceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEE-eccCcCCCCccceeeECCCCC
Confidence 999876442 233344455567788999999999888888999999999998754333 22 11122334444 4787 4
Q ss_pred ceeee---ccceeEEEEeeC
Q psy14130 369 GCDVT---QCEIFRFFKLHT 385 (494)
Q Consensus 369 ~~~~~---~~~~~~~~~l~~ 385 (494)
.+.++ +++.+.+++...
T Consensus 402 ~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 402 PVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp EEEEEEBSSSSEEEEEECCT
T ss_pred cEEEeCCCCCCeEEEecCCC
Confidence 44444 357899998765
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.53 E-value=8e-13 Score=137.59 Aligned_cols=224 Identities=8% Similarity=-0.040 Sum_probs=143.3
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEE---------EEEEc--CCCCCEEEEEe-CCCeEEEEECC--CCeEEEEe
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVG---------YIEWH--PTAENVVASAG-FDYLIILWDVG--KGEALTVI 215 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~---------~~~~~--p~~~~~l~s~s-~d~~v~iwd~~--~~~~~~~~ 215 (494)
...||....+ .....+..|...+. ...|+ |+|..+|+.++ .+..|.+|++. .......+
T Consensus 48 ~~~l~~~~~~-------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l 120 (662)
T 3azo_A 48 RATLVRRRAD-------GAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPL 120 (662)
T ss_dssp EEEEEEECTT-------SCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEEC
T ss_pred cEEEEEECCC-------CCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEec
Confidence 5788986444 23345666665555 56565 99854144444 46677777775 20334556
Q ss_pred cC-----CCCceEEEEEcCCCCEEEEEeCC----------CeEEEEeCCC------CceEEEee-ecCCCCceEEEEECC
Q psy14130 216 DC-----HPDVINCLSFNRDGSRLVTTCKD----------KTVRVLDPRT------GLVISQGV-CHPGTRSSKAVFIGD 273 (494)
Q Consensus 216 ~~-----h~~~v~~l~~~~~~~~l~s~~~d----------~~v~iwd~~~------~~~~~~~~-~~~~~~~~~~~~~~~ 273 (494)
.. |...+.+++|+|||+.|++++.| ..|++||+.+ ++. ..+. .+... +..+.|+|+
T Consensus 121 ~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~-~~~~~~SpD 198 (662)
T 3azo_A 121 TPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRF-VTGPRLSPD 198 (662)
T ss_dssp SCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSE-ECCCEECTT
T ss_pred cCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCc-ccCceECCC
Confidence 55 66788999999999999998877 5899999988 554 3343 33333 677899999
Q ss_pred CCeEEEEEecCC----CCceEEEEeCC-CCC--CceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCc--EEEEEeeCCC
Q psy14130 274 TGRIVTTGFSRH----SDRQVGLWDEN-DLN--TPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGN--IRYYELTNER 344 (494)
Q Consensus 274 ~~~l~~~g~~~~----~d~~i~iwd~~-~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~--i~~wd~~~~~ 344 (494)
+..|+.++.... ....|++||+. ++. ....+. ..+...+..+.|+|||+ +++++..|+. |.+||+.+++
T Consensus 199 G~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~-~~~~~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~~~ 276 (662)
T 3azo_A 199 GRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLL-GGPEEAIAQAEWAPDGS-LIVATDRTGWWNLHRVDPATGA 276 (662)
T ss_dssp SSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEE-EETTBCEEEEEECTTSC-EEEEECTTSSCEEEEECTTTCC
T ss_pred CCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeC-CCCCceEcceEECCCCe-EEEEECCCCCeEEEEEECCCCc
Confidence 777776662110 12589999998 331 222221 12346788999999999 5577778884 5555554555
Q ss_pred ceEEecccccC-CCC-----eeEEEEecCCceeeec-cceeEEEEeeC
Q psy14130 345 PYIHFLNQSLS-GAP-----QRGLGFMPKRGCDVTQ-CEIFRFFKLHT 385 (494)
Q Consensus 345 ~~~~~~~~~~~-~~~-----v~~~~~~p~~~~~~~~-~~~~~~~~l~~ 385 (494)
. ..+...... ..+ +..++|+|++.++++. .+..++|.+..
T Consensus 277 ~-~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~ 323 (662)
T 3azo_A 277 A-TQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAVLGILDP 323 (662)
T ss_dssp E-EESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCEEEEEET
T ss_pred e-eecccccccccCccccccCceEeEeCCCEEEEEEEcCccEEEEEEC
Confidence 3 232221110 011 5679999998877664 27788997764
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=99.51 E-value=5.5e-12 Score=120.84 Aligned_cols=202 Identities=12% Similarity=0.118 Sum_probs=132.9
Q ss_pred CcEEEEEcCCCCCCCCcccceEe-cccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCC-CeEEEE------ecCCCC
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMD-LHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGK-GEALTV------IDCHPD 220 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~-~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~-~~~~~~------~~~h~~ 220 (494)
+.|.+||+.++ +.+.. +. +.. ...+.+.|++...+++.+.||.+.+|++.. ++.... +..+..
T Consensus 131 ~~v~v~d~~~~-------~~~~~~i~-~~~-~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~ 201 (361)
T 2oiz_A 131 TSIGIVDVAKG-------DYVEDVTA-AAG-CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDD 201 (361)
T ss_dssp EEEEEEETTTT-------EEEEEEGG-GTT-EEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTS
T ss_pred CeEEEEECCCC-------cEEEEEec-CCC-cceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCC
Confidence 46999999987 44444 33 222 233667888767889999999999999865 544422 222222
Q ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce--EEEeee------cCCC---CceEEEEECCCCeEEEEEecCC----
Q psy14130 221 VINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLV--ISQGVC------HPGT---RSSKAVFIGDTGRIVTTGFSRH---- 285 (494)
Q Consensus 221 ~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~--~~~~~~------~~~~---~~~~~~~~~~~~~l~~~g~~~~---- 285 (494)
++ .+.+++++..++..+.++.|.++|+..+.. ...+.. +... ....+++++++++++++.....
T Consensus 202 ~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~ 280 (361)
T 2oiz_A 202 PI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGT 280 (361)
T ss_dssp CB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTC
T ss_pred ce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCccc
Confidence 22 334567788888888899999999976542 222211 0000 0223788999888887751000
Q ss_pred ---CCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCC--CceEEecccccCCCCee
Q psy14130 286 ---SDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNE--RPYIHFLNQSLSGAPQR 360 (494)
Q Consensus 286 ---~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~--~~~~~~~~~~~~~~~v~ 360 (494)
....|.+||+.+.+. +..+.... +..++|+|||++||+++ . +.|.+||..++ +.+..+. ..+...+
T Consensus 281 ~~~~~~~v~viD~~t~~~---v~~i~~~~-p~~ia~spdg~~l~v~n-~-~~v~v~D~~t~~l~~~~~i~---~~G~~P~ 351 (361)
T 2oiz_A 281 HKFPAAEIWVMDTKTKQR---VARIPGRD-ALSMTIDQQRNLMLTLD-G-GNVNVYDISQPEPKLLRTIE---GAAEASL 351 (361)
T ss_dssp TTCCCSEEEEEETTTTEE---EEEEECTT-CCEEEEETTTTEEEEEC-S-SCEEEEECSSSSCEEEEEET---TSCSSEE
T ss_pred ccCCCceEEEEECCCCcE---EEEEecCC-eeEEEECCCCCEEEEeC-C-CeEEEEECCCCcceeeEEec---cCCCCcE
Confidence 135899999987643 23333334 88999999999996554 4 99999999998 6543321 2356688
Q ss_pred EEEEecCCc
Q psy14130 361 GLGFMPKRG 369 (494)
Q Consensus 361 ~~~~~p~~~ 369 (494)
.++++|+|.
T Consensus 352 ~~~~~p~G~ 360 (361)
T 2oiz_A 352 QVQFHPVGG 360 (361)
T ss_dssp EEEECCCSC
T ss_pred EEEecCCCC
Confidence 999999985
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=99.50 E-value=1e-11 Score=117.47 Aligned_cols=210 Identities=10% Similarity=-0.009 Sum_probs=146.4
Q ss_pred cceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCC----Ce
Q psy14130 167 EWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKD----KT 242 (494)
Q Consensus 167 ~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d----~~ 242 (494)
+....+.++...+.+++|+|++ ++++++..++.|.+||..+++.......+...+.+++|+++|++++++..+ +.
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~g-~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~ 113 (333)
T 2dg1_A 35 EPWLEISKKGLQLEGLNFDRQG-QLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGG 113 (333)
T ss_dssp EEEEEEESSCCCEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCE
T ss_pred ceeEEEeccCccccCcEECCCC-CEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCce
Confidence 3445566677778999999998 688888889999999998887665554567889999999999988887766 78
Q ss_pred EEEEeCCCCceEEEeee-cCCCCceEEEEECCCCeEEEEEecCCC------CceEEEEeCCCCCCceeEeeecCCCceEE
Q psy14130 243 VRVLDPRTGLVISQGVC-HPGTRSSKAVFIGDTGRIVTTGFSRHS------DRQVGLWDENDLNTPLALETVDSSSGVLF 315 (494)
Q Consensus 243 v~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~g~~~~~------d~~i~iwd~~~~~~~~~~~~~~~~~~v~~ 315 (494)
|.+||..+++....+.. .....+..+++.++ +.++++. .. .+.|..+|..+... ..+. .....+..
T Consensus 114 i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~-g~l~v~~---~~~~~~~~~~~l~~~~~~~~~~-~~~~--~~~~~~~~ 186 (333)
T 2dg1_A 114 IFAATENGDNLQDIIEDLSTAYCIDDMVFDSK-GGFYFTD---FRGYSTNPLGGVYYVSPDFRTV-TPII--QNISVANG 186 (333)
T ss_dssp EEEECTTSCSCEEEECSSSSCCCEEEEEECTT-SCEEEEE---CCCBTTBCCEEEEEECTTSCCE-EEEE--EEESSEEE
T ss_pred EEEEeCCCCEEEEEEccCccCCcccceEECCC-CCEEEEe---ccccccCCCceEEEEeCCCCEE-EEee--cCCCcccc
Confidence 99999988775433321 12233788889888 4666665 22 35666666554222 1111 12235678
Q ss_pred eEEeCCCCEEEEEEeCCCcEEEEEeeC-CCceEEe----cccccCCCCeeEEEEecCCceeeec--cceeEEEEee
Q psy14130 316 PYYDHDTRILFLAGKGDGNIRYYELTN-ERPYIHF----LNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLH 384 (494)
Q Consensus 316 ~~~~~~~~~l~~~g~~dg~i~~wd~~~-~~~~~~~----~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~ 384 (494)
++|+|+++.|+++...++.|.+||+.+ +.....+ .........+.++++.+++.+.++. ++.+.+|+..
T Consensus 187 i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~ 262 (333)
T 2dg1_A 187 IALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKR 262 (333)
T ss_dssp EEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTT
T ss_pred eEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECCC
Confidence 999999998878887889999999974 3322111 1111112357889999999888775 5678888763
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=99.50 E-value=1.4e-11 Score=113.00 Aligned_cols=216 Identities=12% Similarity=0.050 Sum_probs=158.1
Q ss_pred CcEEEEEcCCCCCCCCcccceEeccccc-ccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCC-CCceEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHK-RRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCH-PDVINCLS 226 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~-~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h-~~~v~~l~ 226 (494)
+.|.+||.+++ +.+..+..+. ..+.++.+.|+| ++|+ +.++.|..||. +++.+..+..+ ...+.++.
T Consensus 15 ~~v~~~d~~tG-------~~~w~~~~~~~~~~~~~~~~pdG-~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~ 83 (276)
T 3no2_A 15 NKIAIINKDTK-------EIVWEYPLEKGWECNSVAATKAG-EILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTAR 83 (276)
T ss_dssp SEEEEEETTTT-------EEEEEEECCTTCCCCEEEECTTS-CEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEE
T ss_pred CEEEEEECCCC-------eEEEEeCCCccCCCcCeEECCCC-CEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccE
Confidence 36999998888 5555665554 468899999998 6888 45788999999 89999988865 35788999
Q ss_pred EcCCCCEEEEEeC-CCeEEEEeCCCCceEEEeeecCC-----CCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCC
Q psy14130 227 FNRDGSRLVTTCK-DKTVRVLDPRTGLVISQGVCHPG-----TRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNT 300 (494)
Q Consensus 227 ~~~~~~~l~s~~~-d~~v~iwd~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~ 300 (494)
+.++|+.+++.+. ++.|..+|. +|+.+.++..... .....+...++ +.++++. ..++.|..||.. ++.
T Consensus 84 ~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~-G~~lv~~---~~~~~v~~~d~~-G~~ 157 (276)
T 3no2_A 84 ILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKK-GNYLVPL---FATSEVREIAPN-GQL 157 (276)
T ss_dssp ECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTT-SCEEEEE---TTTTEEEEECTT-SCE
T ss_pred ECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCC-CCEEEEe---cCCCEEEEECCC-CCE
Confidence 9999999999887 888988886 6887777653221 01334556676 5566666 589999999987 554
Q ss_pred ceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccc-c--CCCCeeEEEEecCCceeeec--c
Q psy14130 301 PLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQS-L--SGAPQRGLGFMPKRGCDVTQ--C 375 (494)
Q Consensus 301 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~-~--~~~~v~~~~~~p~~~~~~~~--~ 375 (494)
.-. ......+..+...++++.+ +++..++.|..+|..+++.+.++-..- . .-..+.+++..++|.++++. +
T Consensus 158 ~w~---~~~~~~~~~~~~~~~g~~~-v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g 233 (276)
T 3no2_A 158 LNS---VKLSGTPFSSAFLDNGDCL-VACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQG 233 (276)
T ss_dssp EEE---EECSSCCCEEEECTTSCEE-EECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECT
T ss_pred EEE---EECCCCccceeEcCCCCEE-EEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccC
Confidence 332 2233455667788999988 777778889999999998866654321 1 11237888999999988875 2
Q ss_pred --------ceeEEEEeeC
Q psy14130 376 --------EIFRFFKLHT 385 (494)
Q Consensus 376 --------~~~~~~~l~~ 385 (494)
+..++++++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~ 251 (276)
T 3no2_A 234 HDREAGKGKHPQLVEIDS 251 (276)
T ss_dssp TCTTGGGSCCCSEEEECT
T ss_pred ccccccccCCceEEEECC
Confidence 2557888876
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=99.48 E-value=4.6e-11 Score=112.83 Aligned_cols=213 Identities=12% Similarity=0.079 Sum_probs=148.1
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCC-----CceE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHP-----DVIN 223 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~-----~~v~ 223 (494)
+.|.+||..++ +.+.++. .......+++++++ .++++...++.|.+||+.+++....+.... ....
T Consensus 64 ~~v~viD~~t~-------~~~~~i~-~~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~ 134 (328)
T 3dsm_A 64 HVIFAIDINTF-------KEVGRIT-GFTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTE 134 (328)
T ss_dssp TEEEEEETTTC-------CEEEEEE-CCSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCC
T ss_pred CEEEEEECccc-------EEEEEcC-CCCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcc
Confidence 46999999988 4444443 34568899999987 666666589999999999998877776332 1556
Q ss_pred EEEEcCCCCEEEEEe--CCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCC----------ceEE
Q psy14130 224 CLSFNRDGSRLVTTC--KDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSD----------RQVG 291 (494)
Q Consensus 224 ~l~~~~~~~~l~s~~--~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d----------~~i~ 291 (494)
.+++ ++..|+.+. .++.|.++|+.+++.+..+..... ...+.+.++ +++++++ ..+ +.|.
T Consensus 135 ~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~--p~~i~~~~d-G~l~v~~---~~~~~~~~~~~~~~~v~ 206 (328)
T 3dsm_A 135 QMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQ--PTSLVMDKY-NKMWTIT---DGGYEGSPYGYEAPSLY 206 (328)
T ss_dssp CEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSC--BCCCEECTT-SEEEEEB---CCBCTTCSSCBCCCEEE
T ss_pred eEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCC--ccceEEcCC-CCEEEEE---CCCccCCccccCCceEE
Confidence 7777 344555554 489999999999998877765433 567888887 5676666 333 7899
Q ss_pred EEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEeccccc-CCCCeeEEEEec-CCc
Q psy14130 292 LWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSL-SGAPQRGLGFMP-KRG 369 (494)
Q Consensus 292 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~-~~~~v~~~~~~p-~~~ 369 (494)
++|..+...... ...........++++|+++.||++.+ .|.+||..+++.... .... ......+++++| ++.
T Consensus 207 ~id~~t~~v~~~-~~~~~g~~p~~la~~~d~~~lyv~~~---~v~~~d~~t~~~~~~--~~~~~~~~~p~gi~vdp~~g~ 280 (328)
T 3dsm_A 207 RIDAETFTVEKQ-FKFKLGDWPSEVQLNGTRDTLYWINN---DIWRMPVEADRVPVR--PFLEFRDTKYYGLTVNPNNGE 280 (328)
T ss_dssp EEETTTTEEEEE-EECCTTCCCEEEEECTTSCEEEEESS---SEEEEETTCSSCCSS--CSBCCCSSCEEEEEECTTTCC
T ss_pred EEECCCCeEEEE-EecCCCCCceeEEEecCCCEEEEEcc---EEEEEECCCCceeee--eeecCCCCceEEEEEcCCCCe
Confidence 999886542212 22222346889999999999977643 899999988764211 1111 135689999999 566
Q ss_pred eeeec------cceeEEEEee
Q psy14130 370 CDVTQ------CEIFRFFKLH 384 (494)
Q Consensus 370 ~~~~~------~~~~~~~~l~ 384 (494)
+.++. ++.+.+|+..
T Consensus 281 lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 281 VYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp EEEEECTTSSSEEEEEEECTT
T ss_pred EEEEcccccccCCEEEEECCC
Confidence 66665 4566666654
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=99.47 E-value=1.9e-11 Score=113.66 Aligned_cols=205 Identities=12% Similarity=0.015 Sum_probs=145.4
Q ss_pred EecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCC
Q psy14130 170 MDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPR 249 (494)
Q Consensus 170 ~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~ 249 (494)
..+..+.....+++|+|++..+++++..++.|..||..++ ...+..+...+.+++++++|+++++...++.|.+||..
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~ 98 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREP 98 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECST
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCC
Confidence 3444456677899999998438889999999999999877 56676777889999999999988887778999999998
Q ss_pred CCceEEEeeecC---CCCceEEEEECCCCeEEEEEec-CC-------------CCceEEEEeCCCCCCceeEeeecCCCc
Q psy14130 250 TGLVISQGVCHP---GTRSSKAVFIGDTGRIVTTGFS-RH-------------SDRQVGLWDENDLNTPLALETVDSSSG 312 (494)
Q Consensus 250 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~g~~-~~-------------~d~~i~iwd~~~~~~~~~~~~~~~~~~ 312 (494)
+++......... ...+..+++.++ +.++++... .. ..+.|..+|.. .... ........
T Consensus 99 ~g~~~~~~~~~~~~~~~~~~~i~~d~~-G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~--g~~~--~~~~~~~~ 173 (296)
T 3e5z_A 99 GGEWESIADSFEGKKLNSPNDVCLAPD-GSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD--GTLS--APIRDRVK 173 (296)
T ss_dssp TCCEEEEECEETTEECCCCCCEEECTT-SCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT--SCEE--EEECCCSS
T ss_pred CCcEEEEeeccCCCCCCCCCCEEECCC-CCEEEECCccccccccccccccccCCCcEEEEECCC--CCEE--EeecCCCC
Confidence 887543332211 112567888888 566665200 01 13456666654 2211 12234456
Q ss_pred eEEeEEeCCCCEEEEEEeCCCcEEEEEee-CCCc-e-EEecccccCCCCeeEEEEecCCceeeeccceeEEEEee
Q psy14130 313 VLFPYYDHDTRILFLAGKGDGNIRYYELT-NERP-Y-IHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLH 384 (494)
Q Consensus 313 v~~~~~~~~~~~l~~~g~~dg~i~~wd~~-~~~~-~-~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~ 384 (494)
...++|+|+++.+ ++.+.++.|.+|++. +++. . .... . .....+.++++.++|.+.++.++.+.+|+..
T Consensus 174 ~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~-~-~~~~~p~~i~~d~~G~l~v~~~~~v~~~~~~ 245 (296)
T 3e5z_A 174 PNGLAFLPSGNLL-VSDTGDNATHRYCLNARGETEYQGVHF-T-VEPGKTDGLRVDAGGLIWASAGDGVHVLTPD 245 (296)
T ss_dssp EEEEEECTTSCEE-EEETTTTEEEEEEECSSSCEEEEEEEE-C-CSSSCCCSEEEBTTSCEEEEETTEEEEECTT
T ss_pred CccEEECCCCCEE-EEeCCCCeEEEEEECCCCcCcCCCeEe-e-CCCCCCCeEEECCCCCEEEEcCCeEEEECCC
Confidence 7889999999999 888889999999997 4443 1 1222 2 1345578999999999888877778888765
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=8.3e-10 Score=102.25 Aligned_cols=197 Identities=9% Similarity=0.026 Sum_probs=133.3
Q ss_pred ccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEE-EecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce
Q psy14130 175 HKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALT-VIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLV 253 (494)
Q Consensus 175 h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~-~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~ 253 (494)
....+.++++.+++ .++++...++.|.+||. +++... ....+...+.+++++++|+++++...++.|..||. +++.
T Consensus 97 ~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~ 173 (299)
T 2z2n_A 97 PDSAPYGITEGPNG-DIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDI 173 (299)
T ss_dssp TTCCEEEEEECTTS-CEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCE
T ss_pred cCCCceeeEECCCC-CEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcE
Confidence 44578999999998 68888777889999998 554433 23335567899999999988887777889999999 6765
Q ss_pred EEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCC
Q psy14130 254 ISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDG 333 (494)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg 333 (494)
...........+..+++.++ +.++++. ..++.|.+||. +.. ............+..++++++|+.+ ++...++
T Consensus 174 ~~~~~~~~~~~~~~i~~~~~-g~l~v~~---~~~~~i~~~~~-~g~-~~~~~~~~~~~~~~~i~~~~~g~l~-v~~~~~~ 246 (299)
T 2z2n_A 174 TEFKIPTPASGPVGITKGND-DALWFVE---IIGNKIGRITT-SGE-ITEFKIPTPNARPHAITAGAGIDLW-FTEWGAN 246 (299)
T ss_dssp EEEECSSTTCCEEEEEECTT-SSEEEEE---TTTTEEEEECT-TCC-EEEEECSSTTCCEEEEEECSTTCEE-EEETTTT
T ss_pred EEeeCCCCCCcceeEEECCC-CCEEEEc---cCCceEEEECC-CCc-EEEEECCCCCCCceeEEECCCCCEE-EeccCCc
Confidence 43211112223678888887 5677766 46789999998 433 2222111234568899999998854 7666788
Q ss_pred cEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec-cceeEEEEeeC
Q psy14130 334 NIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ-CEIFRFFKLHT 385 (494)
Q Consensus 334 ~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~-~~~~~~~~l~~ 385 (494)
.|..||. +++. ..+. .......+.++++ +++.+.++. .+.+..++..+
T Consensus 247 ~i~~~d~-~g~~-~~~~-~~~~~~~~~~i~~-~~g~l~v~~~~~~l~~~~~~~ 295 (299)
T 2z2n_A 247 KIGRLTS-NNII-EEYP-IQIKSAEPHGICF-DGETIWFAMECDKIGKLTLIK 295 (299)
T ss_dssp EEEEEET-TTEE-EEEE-CSSSSCCEEEEEE-CSSCEEEEETTTEEEEEEEC-
T ss_pred eEEEECC-CCce-EEEe-CCCCCCccceEEe-cCCCEEEEecCCcEEEEEcCc
Confidence 9999998 4432 2221 1122356899999 988877764 44444444433
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=99.47 E-value=7.7e-13 Score=128.31 Aligned_cols=217 Identities=7% Similarity=-0.074 Sum_probs=138.4
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEE-----
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINC----- 224 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~----- 224 (494)
.|.+||+.++ +......++......+.|+|+| +.|+.++.++.|++||+.+++.......+......
T Consensus 61 ~l~~~d~~~~-------~~~~l~~~~~~~~~~~~~spdg-~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~ 132 (396)
T 3c5m_A 61 NYYLLNLETQ-------QAVQLTEGKGDNTFGGFISTDE-RAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVA 132 (396)
T ss_dssp EEEEEETTTT-------EEEECCCSSCBCTTTCEECTTS-SEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEE
T ss_pred eEEEEECCCC-------cEEEeecCCCCccccceECCCC-CEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEE
Confidence 5788898776 3222222222223347899998 68988888899999999988766665545443322
Q ss_pred --------------EEEcCCCCEEEEE-----eCCCeEEEEeCCCCceEEEeeecCCCCceEEEEEC-CCCeEEEEEecC
Q psy14130 225 --------------LSFNRDGSRLVTT-----CKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIG-DTGRIVTTGFSR 284 (494)
Q Consensus 225 --------------l~~~~~~~~l~s~-----~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~g~~~ 284 (494)
+.|+|+++.++.+ ..+..|.+||+.+++..... .+... +..+.|+| ++..++.+.-
T Consensus 133 ~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~-~~~~~~sp~dg~~l~~~~~-- 208 (396)
T 3c5m_A 133 NSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAW-LGHPIYRPFDDSTVGFCHE-- 208 (396)
T ss_dssp CTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSC-EEEEEEETTEEEEEEEEEC--
T ss_pred eccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcc-cccceECCCCCCEEEEEec--
Confidence 3567777766554 35678999999988855444 34444 78889999 6555666551
Q ss_pred CCC----ceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCC----CcEEEEEeeCCCceEEecccccCC
Q psy14130 285 HSD----RQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGD----GNIRYYELTNERPYIHFLNQSLSG 356 (494)
Q Consensus 285 ~~d----~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~d----g~i~~wd~~~~~~~~~~~~~~~~~ 356 (494)
... ..|.+||+..... ..+........+..+.|+|||+.|+.++..+ +.|++||+.+++.. . +....
T Consensus 209 ~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~-~-l~~~~-- 283 (396)
T 3c5m_A 209 GPHDLVDARMWLVNEDGSNV-RKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENE-E-VMVMP-- 283 (396)
T ss_dssp SCSSSCSCCCEEEETTSCCC-EESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEE-E-EEECC--
T ss_pred CCCCCCCceEEEEECCCCce-eEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeE-E-eeeCC--
Confidence 112 4789999865432 2221110123577889999999884544332 34999999888642 2 22111
Q ss_pred CCeeEEEEec-CCceeeec------------------cceeEEEEeeC
Q psy14130 357 APQRGLGFMP-KRGCDVTQ------------------CEIFRFFKLHT 385 (494)
Q Consensus 357 ~~v~~~~~~p-~~~~~~~~------------------~~~~~~~~l~~ 385 (494)
... ++|+| ++..++.. +..+.+|++..
T Consensus 284 -~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~ 329 (396)
T 3c5m_A 284 -PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKA 329 (396)
T ss_dssp -SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTT
T ss_pred -CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEeccc
Confidence 123 89999 99877752 35677777665
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=99.45 E-value=3.1e-11 Score=114.02 Aligned_cols=222 Identities=8% Similarity=-0.058 Sum_probs=151.7
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.|.++|..+++....+.... .-.........+.+... .++++...++.|.+||..+++.+.++. .......++++
T Consensus 17 ~~l~~~d~~t~~~~~~i~~~~-n~~~lg~~~~~i~~~~~--~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~ 92 (328)
T 3dsm_A 17 ATLSYYDPATCEVENEVFYRA-NGFKLGDVAQSMVIRDG--IGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFL 92 (328)
T ss_dssp BEEEEEETTTTEEECSHHHHH-HSSCCBSCEEEEEEETT--EEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEE
T ss_pred ceEEEEECCCCEEhhhhHhhh-cCcccCccceEEEEECC--EEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEe
Confidence 369999998874432221000 00112244677877542 577777778999999999999988886 45678999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCC----CceEEEEECCCCeEEEEEecCC-CCceEEEEeCCCCCCcee
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGT----RSSKAVFIGDTGRIVTTGFSRH-SDRQVGLWDENDLNTPLA 303 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~g~~~~-~d~~i~iwd~~~~~~~~~ 303 (494)
++++.+++...++.|.+||+.+++....+...... ....+++ ++++++++. . .++.|.++|+.+.....
T Consensus 93 ~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~---~~~~~~v~viD~~t~~~~~- 166 (328)
T 3dsm_A 93 SDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNC---WSYQNRILKIDTETDKVVD- 166 (328)
T ss_dssp ETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEE---CTTCCEEEEEETTTTEEEE-
T ss_pred CCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEc---CCCCCEEEEEECCCCeEEE-
Confidence 99855555448999999999999987777654410 2456666 457888887 3 48899999998754322
Q ss_pred EeeecCCCceEEeEEeCCCCEEEEEEeCC----------CcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeee
Q psy14130 304 LETVDSSSGVLFPYYDHDTRILFLAGKGD----------GNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVT 373 (494)
Q Consensus 304 ~~~~~~~~~v~~~~~~~~~~~l~~~g~~d----------g~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~ 373 (494)
.+........++++|+|+.+ +++..+ +.|.++|..+++....+. ...+....+++|+|++..+..
T Consensus 167 --~i~~g~~p~~i~~~~dG~l~-v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~--~~~g~~p~~la~~~d~~~lyv 241 (328)
T 3dsm_A 167 --ELTIGIQPTSLVMDKYNKMW-TITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFK--FKLGDWPSEVQLNGTRDTLYW 241 (328)
T ss_dssp --EEECSSCBCCCEECTTSEEE-EEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEE--CCTTCCCEEEEECTTSCEEEE
T ss_pred --EEEcCCCccceEEcCCCCEE-EEECCCccCCccccCCceEEEEECCCCeEEEEEe--cCCCCCceeEEEecCCCEEEE
Confidence 22333456778999999866 655554 789999998887533321 112346899999998887766
Q ss_pred ccceeEEEEeeC
Q psy14130 374 QCEIFRFFKLHT 385 (494)
Q Consensus 374 ~~~~~~~~~l~~ 385 (494)
.++.+.+|++.+
T Consensus 242 ~~~~v~~~d~~t 253 (328)
T 3dsm_A 242 INNDIWRMPVEA 253 (328)
T ss_dssp ESSSEEEEETTC
T ss_pred EccEEEEEECCC
Confidence 655666666554
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=99.45 E-value=2.4e-11 Score=111.13 Aligned_cols=216 Identities=8% Similarity=-0.014 Sum_probs=143.5
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEec-CCCCceEEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVID-CHPDVINCLSF 227 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~h~~~v~~l~~ 227 (494)
+.|.+|+..+... ......+...+.++++++++ +++++.. ++.|.+||...... ..+. .....+.++++
T Consensus 46 ~~i~~~~~~~~~~-------~~~~~~~~~~p~~i~~~~~g-~l~v~~~-~~~i~~~d~~~~~~-~~~~~~~~~~p~~i~~ 115 (270)
T 1rwi_B 46 GRVVKLATGSTGT-------TVLPFNGLYQPQGLAVDGAG-TVYVTDF-NNRVVTLAAGSNNQ-TVLPFDGLNYPEGLAV 115 (270)
T ss_dssp CEEEEECC------------EECCCCSCCSCCCEEECTTC-CEEEEET-TTEEEEECTTCSCC-EECCCCSCSSEEEEEE
T ss_pred CcEEEecCCCccc-------ceEeeCCcCCcceeEECCCC-CEEEEcC-CCEEEEEeCCCceE-eeeecCCcCCCcceEE
Confidence 4688887654421 11112233567889999998 5666666 88999999876543 3333 23367899999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee
Q psy14130 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV 307 (494)
Q Consensus 228 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~ 307 (494)
+++|+++++...++.|.+||..+............ .+..+++.+++ .++++. ..++.|.+||....... ....
T Consensus 116 ~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~-~p~~i~~~~~g-~l~v~~---~~~~~i~~~~~~~~~~~--~~~~ 188 (270)
T 1rwi_B 116 DTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLN-DPDGVAVDNSG-NVYVTD---TDNNRVVKLEAESNNQV--VLPF 188 (270)
T ss_dssp CTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCC-SCCCEEECTTC-CEEEEE---GGGTEEEEECTTTCCEE--ECCC
T ss_pred CCCCCEEEEECCCCEEEEEECCCceeEeeccccCC-CceeEEEeCCC-CEEEEE---CCCCEEEEEecCCCceE--eecc
Confidence 99999888877889999998766553332222222 26788888874 577776 46789999998754321 1112
Q ss_pred cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 308 DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 308 ~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
.....+..++++++|. |+++...++.|.+||....... .. .......+.++++.|++.+.++. ++.++++++..
T Consensus 189 ~~~~~p~~i~~d~~g~-l~v~~~~~~~v~~~~~~~~~~~-~~--~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 189 TDITAPWGIAVDEAGT-VYVTEHNTNQVVKLLAGSTTST-VL--PFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLE 264 (270)
T ss_dssp SSCCSEEEEEECTTCC-EEEEETTTSCEEEECTTCSCCE-EC--CCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCG
T ss_pred cCCCCceEEEECCCCC-EEEEECCCCcEEEEcCCCCcce-ee--ccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCC
Confidence 2235678899999995 5488778899999998765432 21 11122468999999999877775 67777777655
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=99.43 E-value=3.5e-11 Score=114.47 Aligned_cols=201 Identities=15% Similarity=0.179 Sum_probs=129.0
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCC---C--eEEEEECCCCeEEEEecCCCCceE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFD---Y--LIILWDVGKGEALTVIDCHPDVIN 223 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d---~--~v~iwd~~~~~~~~~~~~h~~~v~ 223 (494)
..|.+|++.++. . ..+ ..+.+++|+|+| +.|+.++.+ + .|.+||+.+++.......+ . +.
T Consensus 43 ~~l~~~d~~~~~-------~-~~l----~~~~~~~~SpDg-~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~ 107 (347)
T 2gop_A 43 NTIVIENLKNNA-------R-RFI----ENATMPRISPDG-KKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IR 107 (347)
T ss_dssp EEEEEEETTTCC-------E-EEE----ESCEEEEECTTS-SEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EE
T ss_pred ceEEEEeCCCCc-------e-EEc----ccCCCeEECCCC-CEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-cc
Confidence 358999988762 2 222 467899999999 577766543 3 4888899888766555433 3 99
Q ss_pred EEEEcCCCCEEEEEeCC---------------------------CeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCe
Q psy14130 224 CLSFNRDGSRLVTTCKD---------------------------KTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGR 276 (494)
Q Consensus 224 ~l~~~~~~~~l~s~~~d---------------------------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (494)
+++|+|||+.|+.++.+ ..|.+||+.+++.+..+.. . .+..+.|+|++
T Consensus 108 ~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~--~~~~~~~spdg-- 182 (347)
T 2gop_A 108 SLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P--RFSSGIWHRDK-- 182 (347)
T ss_dssp EEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E--TTCEEEEETTE--
T ss_pred ceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C--CcccccCCCCe--
Confidence 99999999999888742 5799999998886455554 3 37899999996
Q ss_pred EEEEEecCCC------CceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCC-------CcEEEEEeeCC
Q psy14130 277 IVTTGFSRHS------DRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGD-------GNIRYYELTNE 343 (494)
Q Consensus 277 l~~~g~~~~~------d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~d-------g~i~~wd~~~~ 343 (494)
+++++..... ...|.++| +. ....+.. + ..+..+ +|||+.|+..+..+ ..|.+|| ++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~l~~~d--~~-~~~~l~~--~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~ 252 (347)
T 2gop_A 183 IVVNVPHREIIPQYFKFWDIYIWE--DG-KEEKMFE--K-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GK 252 (347)
T ss_dssp EEEEEECCCSSCCSSCCEEEEEEE--TT-EEEEEEE--E-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SS
T ss_pred EEEEEecccccccccccccEEEeC--CC-ceEEecc--C-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CC
Confidence 5555411000 22455555 32 2222221 2 334433 99999984444332 3677777 44
Q ss_pred CceEEecccccCCCCeeE-EEEecCCceeee--ccceeEEEEeeC
Q psy14130 344 RPYIHFLNQSLSGAPQRG-LGFMPKRGCDVT--QCEIFRFFKLHT 385 (494)
Q Consensus 344 ~~~~~~~~~~~~~~~v~~-~~~~p~~~~~~~--~~~~~~~~~l~~ 385 (494)
+. ...... ....+.. ++|+ ++ ++++ .++..++| +..
T Consensus 253 ~~-~~l~~~--~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~ 291 (347)
T 2gop_A 253 EV-MGILDE--VDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWD 291 (347)
T ss_dssp CE-EESSTT--CCSEEEEEEEET-TE-EEEEEEETTEEEEE-EES
T ss_pred ce-Eecccc--CCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcC
Confidence 42 233322 2345776 8999 87 5554 37889999 874
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.43 E-value=1.9e-11 Score=127.76 Aligned_cols=185 Identities=7% Similarity=-0.053 Sum_probs=116.7
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCC----eEEEEECCCCeEEEEecCCCCceEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDY----LIILWDVGKGEALTVIDCHPDVINCL 225 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~----~v~iwd~~~~~~~~~~~~h~~~v~~l 225 (494)
+|++|++.++.... ..+....+|...+.++.|+|+|. +|+.++.++ .|.+||..+++ ...+..+...+...
T Consensus 203 ~v~~~~l~t~~~~~---~lv~~~~~~~~~~~~~~~SpDG~-~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~~~ 277 (695)
T 2bkl_A 203 TIRYHTLGTEPSKD---TVVHERTGDPTTFLQSDLSRDGK-YLFVYILRGWSENDVYWKRPGEKD-FRLLVKGVGAKYEV 277 (695)
T ss_dssp EEEEEETTSCGGGC---EEEECCCCCTTCEEEEEECTTSC-CEEEEEEETTTEEEEEEECTTCSS-CEEEEECSSCCEEE
T ss_pred EEEEEECCCCchhc---eEEEecCCCCEEEEEEEECCCCC-EEEEEEeCCCCceEEEEEcCCCCc-eEEeecCCCceEEE
Confidence 58999998773210 12333445667889999999994 555555444 67777765554 34444566666777
Q ss_pred EEcCCCCEEEEEe---CCCeEEEEeCCCCce--EEEeeecC-CCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCC
Q psy14130 226 SFNRDGSRLVTTC---KDKTVRVLDPRTGLV--ISQGVCHP-GTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLN 299 (494)
Q Consensus 226 ~~~~~~~~l~s~~---~d~~v~iwd~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~ 299 (494)
.| ++|.+++++. .++.|.+||+.+++. ...+..+. ...+..+.+. ++.++++. ..|+..+||.+.-..
T Consensus 278 ~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~--~~~lv~~~---~~dg~~~l~~~~~~g 351 (695)
T 2bkl_A 278 HA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV--GGHLSLEY---LKDATSEVRVATLKG 351 (695)
T ss_dssp EE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE--TTEEEEEE---EETTEEEEEEEETTC
T ss_pred Ee-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE--CCEEEEEE---EECCEEEEEEEeCCC
Confidence 67 5566444444 258999999987753 23444343 4335667777 36777777 578888877654211
Q ss_pred CceeEeeecCCCceEEeEEeCCCCEEEEEEeC---CCcEEEEEeeCCCc
Q psy14130 300 TPLALETVDSSSGVLFPYYDHDTRILFLAGKG---DGNIRYYELTNERP 345 (494)
Q Consensus 300 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~---dg~i~~wd~~~~~~ 345 (494)
.............+..+.++|+++.++++.+. .+.|++||+.+++.
T Consensus 352 ~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 352 KPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp CEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred CeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 11111122234567778899999888655543 46799999988763
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=99.40 E-value=2e-10 Score=106.62 Aligned_cols=210 Identities=12% Similarity=0.036 Sum_probs=138.9
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCC----CCceEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCH----PDVINC 224 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h----~~~v~~ 224 (494)
+.|..|+..++ ...+..+...+.+++++|+| +++++...++.|.+||..+++........ ...+..
T Consensus 50 ~~i~~~~~~~~---------~~~~~~~~~~~~~l~~~~dg-~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~ 119 (296)
T 3e5z_A 50 NRTWAWSDDGQ---------LSPEMHPSHHQNGHCLNKQG-HLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPND 119 (296)
T ss_dssp TEEEEEETTSC---------EEEEESSCSSEEEEEECTTC-CEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCC
T ss_pred CEEEEEECCCC---------eEEEECCCCCcceeeECCCC-cEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCC
Confidence 46899997754 23344566789999999998 68887777789999999888754433221 235678
Q ss_pred EEEcCCCCEEEEEe-----------------CCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCC
Q psy14130 225 LSFNRDGSRLVTTC-----------------KDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSD 287 (494)
Q Consensus 225 l~~~~~~~~l~s~~-----------------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d 287 (494)
++++|+|+++++.+ ..+.|..+|.. ++ +..+..+... ...++|+|++..+ ++. ..+
T Consensus 120 i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~-~~gi~~s~dg~~l-v~~---~~~ 192 (296)
T 3e5z_A 120 VCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDRVK-PNGLAFLPSGNLL-VSD---TGD 192 (296)
T ss_dssp EEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCCSS-EEEEEECTTSCEE-EEE---TTT
T ss_pred EEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCCCC-CccEEECCCCCEE-EEe---CCC
Confidence 99999999888732 13467777766 54 3334444443 6889999996666 777 678
Q ss_pred ceEEEEeCCCCCCc-eeEee-ecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEE-
Q psy14130 288 RQVGLWDENDLNTP-LALET-VDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGF- 364 (494)
Q Consensus 288 ~~i~iwd~~~~~~~-~~~~~-~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~- 364 (494)
+.|.+||+...... ..... ......+..++++++|+.+ ++. ++.|.+||.. ++.+..+ .. ... +.+++|
T Consensus 193 ~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~-v~~--~~~v~~~~~~-g~~~~~~-~~--~~~-~~~~~f~ 264 (296)
T 3e5z_A 193 NATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIW-ASA--GDGVHVLTPD-GDELGRV-LT--PQT-TSNLCFG 264 (296)
T ss_dssp TEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEE-EEE--TTEEEEECTT-SCEEEEE-EC--SSC-CCEEEEE
T ss_pred CeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEE-EEc--CCeEEEECCC-CCEEEEE-EC--CCC-ceeEEEE
Confidence 99999998632222 11111 1133456678999999866 555 7889999986 5543322 21 123 889999
Q ss_pred ecCCceee-eccceeEEEEeeC
Q psy14130 365 MPKRGCDV-TQCEIFRFFKLHT 385 (494)
Q Consensus 365 ~p~~~~~~-~~~~~~~~~~l~~ 385 (494)
.|++..+. +... .+|++..
T Consensus 265 ~~d~~~L~v~t~~--~l~~~~~ 284 (296)
T 3e5z_A 265 GPEGRTLYMTVST--EFWSIET 284 (296)
T ss_dssp STTSCEEEEEETT--EEEEEEC
T ss_pred CCCCCEEEEEcCC--eEEEEEc
Confidence 58876444 4333 5666665
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=5.5e-11 Score=124.68 Aligned_cols=204 Identities=9% Similarity=-0.013 Sum_probs=135.1
Q ss_pred cccccEEEEEEcCCCCCEEEEEeCC-C----eEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCe------
Q psy14130 174 GHKRRVGYIEWHPTAENVVASAGFD-Y----LIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKT------ 242 (494)
Q Consensus 174 ~h~~~V~~~~~~p~~~~~l~s~s~d-~----~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~------ 242 (494)
+|...+..++|||+| ++||.++.+ | .|++||+.+++.+.....+ ..+.+++|+|||+.|+.++.++.
T Consensus 122 ~~~~~~~~~~~SPDg-~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~ 199 (710)
T 2xdw_A 122 DGTVALRGYAFSEDG-EYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDG 199 (710)
T ss_dssp TSCEEEEEEEECTTS-SEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSS
T ss_pred CCCEEEEEEEECCCC-CEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccc
Confidence 355578899999999 566655443 3 8999999999876533222 23678999999999999988766
Q ss_pred ----------EEEEeCCCCce--EEEeee--cCCCCceEEEEECCCCeEEEEEecCCC-CceEEEEeCCC------CC-C
Q psy14130 243 ----------VRVLDPRTGLV--ISQGVC--HPGTRSSKAVFIGDTGRIVTTGFSRHS-DRQVGLWDEND------LN-T 300 (494)
Q Consensus 243 ----------v~iwd~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~l~~~g~~~~~-d~~i~iwd~~~------~~-~ 300 (494)
|++|++.+++. ...+.. |... ...+.|+|++..++.+...... +..|++||+.+ .. .
T Consensus 200 ~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~-~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~ 278 (710)
T 2xdw_A 200 TETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKW-MGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILK 278 (710)
T ss_dssp SCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTC-EEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCC
T ss_pred cccccCCCCEEEEEECCCCcccceEEeccCCCCeE-EEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccc
Confidence 99999988762 222222 3333 5688999997777776621121 67899999875 32 2
Q ss_pred ceeEeeecCCCceEEeEEeCCCCEEEEEEeCCC---cEEEEEeeCCCc--eEEecccccCCCCeeEEEEecCCceeeec-
Q psy14130 301 PLALETVDSSSGVLFPYYDHDTRILFLAGKGDG---NIRYYELTNERP--YIHFLNQSLSGAPQRGLGFMPKRGCDVTQ- 374 (494)
Q Consensus 301 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg---~i~~wd~~~~~~--~~~~~~~~~~~~~v~~~~~~p~~~~~~~~- 374 (494)
...+. .+...+.. .|+|+|+.|++.+..++ .|.+||+.++.. ...++.. .....+.+++|++++.++++.
T Consensus 279 ~~~l~--~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~lv~~~~ 354 (710)
T 2xdw_A 279 WVKLI--DNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPE-HEKDVLEWVACVRSNFLVLCYL 354 (710)
T ss_dssp CEEEE--CSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECC-CSSCEEEEEEEETTTEEEEEEE
T ss_pred eEEee--CCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCC-CCCCeEEEEEEEcCCEEEEEEE
Confidence 22222 23333333 58899999877665443 699999887642 2333322 112368889999877776664
Q ss_pred -cceeEEEEee
Q psy14130 375 -CEIFRFFKLH 384 (494)
Q Consensus 375 -~~~~~~~~l~ 384 (494)
++..++|.+.
T Consensus 355 ~~g~~~l~~~~ 365 (710)
T 2xdw_A 355 HDVKNTLQLHD 365 (710)
T ss_dssp ETTEEEEEEEE
T ss_pred ECCEEEEEEEE
Confidence 6666666554
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=99.40 E-value=1.2e-10 Score=106.47 Aligned_cols=180 Identities=11% Similarity=0.032 Sum_probs=126.3
Q ss_pred CcEEEEEcCCCCCCCCcccceEecc-cccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLH-GHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSF 227 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~-~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~ 227 (494)
+.|.+||...... ..+. .....+.++++++++ +++++...++.|.+||..+.............+.++++
T Consensus 87 ~~i~~~d~~~~~~--------~~~~~~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~ 157 (270)
T 1rwi_B 87 NRVVTLAAGSNNQ--------TVLPFDGLNYPEGLAVDTQG-AVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAV 157 (270)
T ss_dssp TEEEEECTTCSCC--------EECCCCSCSSEEEEEECTTC-CEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEE
T ss_pred CEEEEEeCCCceE--------eeeecCCcCCCcceEECCCC-CEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEE
Confidence 3588888665421 1111 233568899999998 68888777889999987655433322233356789999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee
Q psy14130 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV 307 (494)
Q Consensus 228 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~ 307 (494)
+++|+++++...++.|.+||............+.. .+..+++.+++ .++++. ..++.|.+||...... . ....
T Consensus 158 ~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~-~p~~i~~d~~g-~l~v~~---~~~~~v~~~~~~~~~~-~-~~~~ 230 (270)
T 1rwi_B 158 DNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDIT-APWGIAVDEAG-TVYVTE---HNTNQVVKLLAGSTTS-T-VLPF 230 (270)
T ss_dssp CTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCC-SEEEEEECTTC-CEEEEE---TTTSCEEEECTTCSCC-E-ECCC
T ss_pred eCCCCEEEEECCCCEEEEEecCCCceEeecccCCC-CceEEEECCCC-CEEEEE---CCCCcEEEEcCCCCcc-e-eecc
Confidence 99999877777789999999987664433222323 37888888874 777777 5788999999865332 1 1111
Q ss_pred cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCc
Q psy14130 308 DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERP 345 (494)
Q Consensus 308 ~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~ 345 (494)
.+...+..++++++|+ |+++...++.|++|++...+.
T Consensus 231 ~~~~~p~~i~~~~~g~-l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 231 TGLNTPLAVAVDSDRT-VYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp CSCSCEEEEEECTTCC-EEEEEGGGTEEEEECCCGGGS
T ss_pred CCCCCceeEEECCCCC-EEEEECCCCEEEEEcCCCccc
Confidence 2335688999999997 558888999999999887653
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=99.39 E-value=6.4e-12 Score=119.65 Aligned_cols=173 Identities=9% Similarity=0.037 Sum_probs=129.1
Q ss_pred cEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe-----------EEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEE
Q psy14130 178 RVGYIEWHPTAENVVASAGFDYLIILWDVGKGE-----------ALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVL 246 (494)
Q Consensus 178 ~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~-----------~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iw 246 (494)
.++.+++++.. .++++|+.++ +++|++.... ..... .+.. |+.|+| |++.|+++ .++.|++|
T Consensus 39 ~~nlLais~~~-gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~v~ 111 (388)
T 1xip_A 39 SLQNLDISNSK-SLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALYSL 111 (388)
T ss_dssp CCBCEEEETTT-TEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEEEE
T ss_pred cccEEEEcCCC-CEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEEEE
Confidence 58899999998 6999999875 6669865322 11223 3566 999999 89999998 88999999
Q ss_pred eCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEE
Q psy14130 247 DPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILF 326 (494)
Q Consensus 247 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 326 (494)
|+++.........|... +..+.+.+. .++++. .||.|.+||+.+... .. ....|.+++|+|+| +
T Consensus 112 dv~sl~~~~~~~~~~~~-v~~i~~~~p--~~av~~----~dG~L~v~dl~~~~~-~~-----~~~~Vs~v~WSpkG--~- 175 (388)
T 1xip_A 112 DLEELSEFRTVTSFEKP-VFQLKNVNN--TLVILN----SVNDLSALDLRTKST-KQ-----LAQNVTSFDVTNSQ--L- 175 (388)
T ss_dssp ESSSTTCEEEEEECSSC-EEEEEECSS--EEEEEE----TTSEEEEEETTTCCE-EE-----EEESEEEEEECSSE--E-
T ss_pred EchhhhccCccceeecc-eeeEEecCC--CEEEEE----CCCCEEEEEccCCcc-cc-----ccCCceEEEEcCCc--e-
Confidence 99887766666677665 777777665 344444 899999999986543 11 23579999999999 4
Q ss_pred EEEeCCCcEEEEEeeCCCc--eEEec------ccccCCCCeeEEEEecCCceeee
Q psy14130 327 LAGKGDGNIRYYELTNERP--YIHFL------NQSLSGAPQRGLGFMPKRGCDVT 373 (494)
Q Consensus 327 ~~g~~dg~i~~wd~~~~~~--~~~~~------~~~~~~~~v~~~~~~p~~~~~~~ 373 (494)
+.|..||++++|+...++. ...+. .+..+...|.+++|.+++.++++
T Consensus 176 ~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 176 AVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 6788999999999887763 22221 11124577999999999998876
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=99.37 E-value=2.9e-10 Score=108.02 Aligned_cols=204 Identities=12% Similarity=0.122 Sum_probs=128.0
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeC---------------------------CCeEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGF---------------------------DYLII 202 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~---------------------------d~~v~ 202 (494)
.|.+|++.++ +...... +.. +.+++|+|+| +.|+.++. ...|.
T Consensus 86 ~l~~~~~~~g-------~~~~l~~-~~~-~~~~~wspdg-~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~ 155 (347)
T 2gop_A 86 EIWVADLETL-------SSKKILE-AKN-IRSLEWNEDS-RKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFW 155 (347)
T ss_dssp EEEEEETTTT-------EEEEEEE-ESE-EEEEEECTTS-SEEEEEEECCCC---------CCCC---------CEEEEE
T ss_pred eEEEEECCCC-------ceEEEEc-CCC-ccceeECCCC-CEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEE
Confidence 4778888766 3333222 334 9999999998 56666653 25799
Q ss_pred EEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCC-------eEEEEeCCCCceEEEeeecCCCCceEEEEECCCC
Q psy14130 203 LWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDK-------TVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTG 275 (494)
Q Consensus 203 iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~-------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (494)
+||+.+++.+..+.. . .+..++|+||| +++++..+. ...||.+.+++ ...+..+ .. +... +|++.
T Consensus 156 ~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~l~~~-~~-~~~~--spdg~ 227 (347)
T 2gop_A 156 IFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGK-EEKMFEK-VS-FYAV--DSDGE 227 (347)
T ss_dssp EEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTE-EEEEEEE-ES-EEEE--EECSS
T ss_pred EEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCc-eEEeccC-cc-eeeE--CCCCC
Confidence 999998887455554 4 78899999999 877776542 33444443554 3344444 32 3333 88877
Q ss_pred eEEEEEecCC----CCceEEEEeCCCCCCceeEeeecCCCceEE-eEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEec
Q psy14130 276 RIVTTGFSRH----SDRQVGLWDENDLNTPLALETVDSSSGVLF-PYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFL 350 (494)
Q Consensus 276 ~l~~~g~~~~----~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~ 350 (494)
.++.++.... ....|.+|| +.. ...+ ...+...+.. +.|+ |+ ++++++.++.+++| +.+++. ....
T Consensus 228 ~l~~~~~~~~~~~~~~~~l~~~d--~~~-~~~l-~~~~~~~~~~~~~~s-dg--~~~~~~~~~~~~l~-~~~g~~-~~~~ 298 (347)
T 2gop_A 228 RILLYGKPEKKYMSEHNKLYIYD--GKE-VMGI-LDEVDRGVGQAKIKD-GK--VYFTLFEEGSVNLY-IWDGEI-KPIA 298 (347)
T ss_dssp CEEEEECCSSSCCCSSCEEEEEC--SSC-EEES-STTCCSEEEEEEEET-TE--EEEEEEETTEEEEE-EESSSE-EEEE
T ss_pred EEEEEEccccCCccccceEEEEC--CCc-eEec-cccCCcccCCccEEc-Cc--EEEEEecCCcEEEE-EcCCce-EEEe
Confidence 7777761100 134788888 322 1111 1123355665 8899 87 55888899999999 886553 3332
Q ss_pred ccccCCCCeeEEEEecCCceeeec-cce-eEEEEee
Q psy14130 351 NQSLSGAPQRGLGFMPKRGCDVTQ-CEI-FRFFKLH 384 (494)
Q Consensus 351 ~~~~~~~~v~~~~~~p~~~~~~~~-~~~-~~~~~l~ 384 (494)
. ....+.+++|+| +.+++.. +.. .++|.+.
T Consensus 299 ~---~~~~v~~~~~s~-~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 299 K---GRHWIMGFDVDE-IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp C---SSSEEEEEEESS-SEEEEEECSSSCCEEEEES
T ss_pred c---CCCeEEeeeeeC-cEEEEEcCCCChHHheEeC
Confidence 2 246789999999 5444333 333 4888875
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=99.36 E-value=1.1e-09 Score=106.59 Aligned_cols=228 Identities=12% Similarity=0.013 Sum_probs=149.4
Q ss_pred CCcEEEEEEc--CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCC--eEEEEECCCCeEEEE
Q psy14130 139 GGGAFLVLPI--HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDY--LIILWDVGKGEALTV 214 (494)
Q Consensus 139 ~~g~~~~~~~--~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~--~v~iwd~~~~~~~~~ 214 (494)
.+|.+++... +.|++||..++. ....... ..... ++|+|++ ..|+++..++ .|.++|...+.....
T Consensus 140 ~~g~lyv~d~~~~~I~~id~~~g~-------~~~~~~~-~~~~~-ia~~~~g-~~l~~~d~~~~~~I~~~d~~~~~~~~~ 209 (409)
T 3hrp_A 140 GNNTVLAYQRDDPRVRLISVDDNK-------VTTVHPG-FKGGK-PAVTKDK-QRVYSIGWEGTHTVYVYMKASGWAPTR 209 (409)
T ss_dssp STTEEEEEETTTTEEEEEETTTTE-------EEEEEET-CCBCB-CEECTTS-SEEEEEBSSTTCEEEEEEGGGTTCEEE
T ss_pred CCCCEEEEecCCCcEEEEECCCCE-------EEEeecc-CCCCc-eeEecCC-CcEEEEecCCCceEEEEEcCCCceeEE
Confidence 4455666654 579999988762 2222222 22233 9999998 5788777765 899999876654334
Q ss_pred e----cCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEE----eeecCCCCce-EEEEECCCCeEEEEEecCC
Q psy14130 215 I----DCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQ----GVCHPGTRSS-KAVFIGDTGRIVTTGFSRH 285 (494)
Q Consensus 215 ~----~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~l~~~g~~~~ 285 (494)
+ ......+.+++++|++..|+.+..++.|+.||+.++..... ..++...... .+++.|+++.++++. .
T Consensus 210 ~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d---~ 286 (409)
T 3hrp_A 210 IGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSD---Q 286 (409)
T ss_dssp EEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEE---T
T ss_pred eeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEe---C
Confidence 4 22456788999999555555677789999999987763322 2222222123 899999778999888 7
Q ss_pred CCceEEEEeCCCCCCceeEeeec-------------CCCceEEeEEeCCCCEEEEEEe-CCCcEEEEEeeCCCceEEecc
Q psy14130 286 SDRQVGLWDENDLNTPLALETVD-------------SSSGVLFPYYDHDTRILFLAGK-GDGNIRYYELTNERPYIHFLN 351 (494)
Q Consensus 286 ~d~~i~iwd~~~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~l~~~g~-~dg~i~~wd~~~~~~~~~~~~ 351 (494)
.++.|+.||.... ...+.... .-.....++++|+|+ ||++-. .++.|+.|++.+++. ..+..
T Consensus 287 ~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyvad~~~~~~I~~~~~~~G~v-~~~~g 362 (409)
T 3hrp_A 287 NLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FYIVDGFKGYCLRKLDILDGYV-STVAG 362 (409)
T ss_dssp TTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEEETTTTCEEEEEETTTTEE-EEEEE
T ss_pred CCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EEEEeCCCCCEEEEEECCCCEE-EEEeC
Confidence 8899999997642 11111110 013477899999998 558888 899999999877753 22222
Q ss_pred cc-c-----------CCCCeeEEEEecCCceeeeccceeEEEEe
Q psy14130 352 QS-L-----------SGAPQRGLGFMPKRGCDVTQCEIFRFFKL 383 (494)
Q Consensus 352 ~~-~-----------~~~~v~~~~~~p~~~~~~~~~~~~~~~~l 383 (494)
.. . .-....++++.|++.++++..+.-+|.++
T Consensus 363 ~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i 406 (409)
T 3hrp_A 363 QVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKY 406 (409)
T ss_dssp CTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEE
T ss_pred CCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEE
Confidence 10 0 01357899999998888886444444433
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.36 E-value=8.1e-11 Score=123.08 Aligned_cols=201 Identities=10% Similarity=-0.019 Sum_probs=131.6
Q ss_pred cccccEEEEEEcCCCCCEEE-----EEeCCCeEEEEECCCCeEEEEecCCCCce--EEEEEcCCCCEEEEEeCCCe----
Q psy14130 174 GHKRRVGYIEWHPTAENVVA-----SAGFDYLIILWDVGKGEALTVIDCHPDVI--NCLSFNRDGSRLVTTCKDKT---- 242 (494)
Q Consensus 174 ~h~~~V~~~~~~p~~~~~l~-----s~s~d~~v~iwd~~~~~~~~~~~~h~~~v--~~l~~~~~~~~l~s~~~d~~---- 242 (494)
+|...+.+++|||+| ++|| +|+.+..|++||+.+++.+. ..+...+ .+++|+|||+.|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG-~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~ 194 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDG-KKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIK 194 (695)
T ss_dssp SSCEEEEEEEECTTS-SEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSC
T ss_pred CCCEEEEEEEECCCC-CEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCc
Confidence 466679999999999 5666 34445789999999987641 1122222 68999999999999998776
Q ss_pred ---------EEEEeCCCCc----eEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecC
Q psy14130 243 ---------VRVLDPRTGL----VISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDS 309 (494)
Q Consensus 243 ---------v~iwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 309 (494)
|++|++.++. ++.....+... +..+.|+|++..+++++........|.+||..+.. ...+. .+
T Consensus 195 ~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~-~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~--~~ 270 (695)
T 2bkl_A 195 VDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTT-FLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD-FRLLV--KG 270 (695)
T ss_dssp GGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTC-EEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS-CEEEE--EC
T ss_pred cccCCCCCEEEEEECCCCchhceEEEecCCCCEE-EEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc-eEEee--cC
Confidence 9999999876 23233333333 67889999987777776211012367777654432 22222 23
Q ss_pred CCceEEeEEeCCCCEEEEEEe---CCCcEEEEEeeCCCc--eEEecccccCCCCeeEEEEecCCceeeec--cceeEEEE
Q psy14130 310 SSGVLFPYYDHDTRILFLAGK---GDGNIRYYELTNERP--YIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFK 382 (494)
Q Consensus 310 ~~~v~~~~~~~~~~~l~~~g~---~dg~i~~wd~~~~~~--~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~ 382 (494)
...+....+ +++. +++.+. .++.|.+||+.+++. ...++.. .....+.+++|+ ++.++++. ++..++|.
T Consensus 271 ~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~-~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~ 346 (695)
T 2bkl_A 271 VGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPE-DSSASLLSVSIV-GGHLSLEYLKDATSEVRV 346 (695)
T ss_dssp SSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECC-CSSCEEEEEEEE-TTEEEEEEEETTEEEEEE
T ss_pred CCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecC-CCCCeEEEEEEE-CCEEEEEEEECCEEEEEE
Confidence 344555556 6777 656654 357899999987653 2333322 123457888998 55555553 78889998
Q ss_pred eeC
Q psy14130 383 LHT 385 (494)
Q Consensus 383 l~~ 385 (494)
+..
T Consensus 347 ~~~ 349 (695)
T 2bkl_A 347 ATL 349 (695)
T ss_dssp EET
T ss_pred EeC
Confidence 874
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=99.36 E-value=8.2e-09 Score=95.53 Aligned_cols=213 Identities=10% Similarity=0.005 Sum_probs=139.9
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEE-EecCCCCceEEEEEc
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALT-VIDCHPDVINCLSFN 228 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~-~~~~h~~~v~~l~~~ 228 (494)
.|..||.. +.. ....+......+.++++.+++ +++++...++.|..+|.. ++... .+......+.+++++
T Consensus 84 ~v~~~d~~-g~~------~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d 154 (300)
T 2qc5_A 84 KIGKLSKK-GGF------TEYPLPQPDSGPYGITEGLNG-DIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLG 154 (300)
T ss_dssp EEEEECTT-SCE------EEEECSSTTCCEEEEEECSTT-CEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEEC
T ss_pred eEEEECCC-CCe------EEecCCCCCCCCccceECCCC-CEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEEC
Confidence 47777765 321 111222234668999999998 688877778899999987 55442 233345678999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD 308 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~ 308 (494)
++|+++++...++.|..+|. +++............+..+++.++ +.++++. ...+.|.+||.. .. ........
T Consensus 155 ~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~-g~l~v~~---~~~~~i~~~~~~-g~-~~~~~~~~ 227 (300)
T 2qc5_A 155 SDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGND-GALWFVE---IMGNKIGRITTT-GE-ISEYDIPT 227 (300)
T ss_dssp TTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTT-SSEEEEE---TTTTEEEEECTT-CC-EEEEECSS
T ss_pred CCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCC-CCEEEEc---cCCCEEEEEcCC-Cc-EEEEECCC
Confidence 99997777767889999998 566443211122223678888876 5677776 467789999983 22 22221112
Q ss_pred CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccceeEEEEee
Q psy14130 309 SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLH 384 (494)
Q Consensus 309 ~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~ 384 (494)
....+..++++++|+.+ ++...++.|..||. +++. ..+. .......+.++++.++|.+.++.. . +++.+.
T Consensus 228 ~~~~~~~i~~d~~g~l~-v~~~~~~~i~~~~~-~g~~-~~~~-~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~ 297 (300)
T 2qc5_A 228 PNARPHAITAGKNSEIW-FTEWGANQIGRITN-DNTI-QEYQ-LQTENAEPHGITFGKDGSVWFALK-C-KIGKLN 297 (300)
T ss_dssp TTCCEEEEEECSTTCEE-EEETTTTEEEEECT-TSCE-EEEE-CCSTTCCCCCEEECTTSCEEEECS-S-EEEEEE
T ss_pred CCCCceEEEECCCCCEE-EeccCCCeEEEECC-CCcE-EEEE-CCccCCccceeEeCCCCCEEEEcc-C-ceEEeC
Confidence 34567889999998854 77667789999998 4443 2221 111235588999999998777765 3 565544
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=99.35 E-value=1.2e-10 Score=106.90 Aligned_cols=183 Identities=10% Similarity=0.017 Sum_probs=132.4
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEEecCCC-CceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEE
Q psy14130 190 NVVASAGFDYLIILWDVGKGEALTVIDCHP-DVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKA 268 (494)
Q Consensus 190 ~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~-~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~ 268 (494)
++|++++.|+.|.+||.++|+.+.++..+. ..+.++.++|+|++|+ +.++.|..||. +++.+.++..+....+..+
T Consensus 6 ~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~ 82 (276)
T 3no2_A 6 HLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTA 82 (276)
T ss_dssp EEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEE
T ss_pred cEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCcccccc
Confidence 699999999999999999999999998766 5789999999999888 45788999999 8999988887644346778
Q ss_pred EEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee----cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCC
Q psy14130 269 VFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV----DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNER 344 (494)
Q Consensus 269 ~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~ 344 (494)
.+.+++..+++.+ ..++.|..+|.. ++........ ........+...++|+++ ++...++.|..||.. ++
T Consensus 83 ~~~~dG~~lv~~~---~~~~~v~~vd~~-Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~l-v~~~~~~~v~~~d~~-G~ 156 (276)
T 3no2_A 83 RILPDGNALVAWC---GHPSTILEVNMK-GEVLSKTEFETGIERPHAQFRQINKNKKGNYL-VPLFATSEVREIAPN-GQ 156 (276)
T ss_dssp EECTTSCEEEEEE---STTEEEEEECTT-SCEEEEEEECCSCSSGGGSCSCCEECTTSCEE-EEETTTTEEEEECTT-SC
T ss_pred EECCCCCEEEEec---CCCCEEEEEeCC-CCEEEEEeccCCCCcccccccCceECCCCCEE-EEecCCCEEEEECCC-CC
Confidence 8888865555544 226778777753 3322222110 011234456788999988 788899999999988 87
Q ss_pred ceEEecccccCCCCeeEEEEecCCceeeeccceeEEEEeeC
Q psy14130 345 PYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 345 ~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~~ 385 (494)
.+.++-. ...+.++.+.+++.++++....-++..++.
T Consensus 157 ~~w~~~~----~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~ 193 (276)
T 3no2_A 157 LLNSVKL----SGTPFSSAFLDNGDCLVACGDAHCFVQLNL 193 (276)
T ss_dssp EEEEEEC----SSCCCEEEECTTSCEEEECBTTSEEEEECT
T ss_pred EEEEEEC----CCCccceeEcCCCCEEEEeCCCCeEEEEeC
Confidence 6555432 245667888999988887633334444443
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=99.34 E-value=1.1e-09 Score=102.49 Aligned_cols=222 Identities=12% Similarity=0.121 Sum_probs=142.1
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCC-CCCEEEEEeCCCeEEEEECCCCeEEEE-ecC----CCCc
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPT-AENVVASAGFDYLIILWDVGKGEALTV-IDC----HPDV 221 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~-~~~~l~s~s~d~~v~iwd~~~~~~~~~-~~~----h~~~ 221 (494)
.+.|.+||..++.... +.. ....++...+.+++++++ + +++++.. ...|.+||.. ++.... ... ....
T Consensus 45 ~~~i~~~d~~~g~~~~-~~~--~~~~~~~~~~~~i~~~~~~g-~l~v~~~-~~~l~~~d~~-g~~~~~~~~~~~~~~~~~ 118 (314)
T 1pjx_A 45 AGEILRIDLKTGKKTV-ICK--PEVNGYGGIPAGCQCDRDAN-QLFVADM-RLGLLVVQTD-GTFEEIAKKDSEGRRMQG 118 (314)
T ss_dssp CCEEEEECTTTCCEEE-EEC--CEETTEECCEEEEEECSSSS-EEEEEET-TTEEEEEETT-SCEEECCSBCTTSCBCBC
T ss_pred CCEEEEEeCCCCcEEE-EEe--cccCCCCCCCceEEEecCCC-cEEEEEC-CCCEEEEeCC-CCEEEEEeccCCCccccC
Confidence 4568999877663210 000 001235567899999999 6 5555544 4479999998 665433 221 1235
Q ss_pred eEEEEEcCCCCEEEEEeCC---------------CeEEEEeCCCCceEEEeeecCCCCceEEEEE----CCCCeEEEEEe
Q psy14130 222 INCLSFNRDGSRLVTTCKD---------------KTVRVLDPRTGLVISQGVCHPGTRSSKAVFI----GDTGRIVTTGF 282 (494)
Q Consensus 222 v~~l~~~~~~~~l~s~~~d---------------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~g~ 282 (494)
+.+++++++|+++++...+ +.|..||.. ++..... .+... ...+++. +++..++++.
T Consensus 119 ~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~-~~~~~-~~~i~~~~~~d~dg~~l~v~~- 194 (314)
T 1pjx_A 119 CNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD-TAFQF-PNGIAVRHMNDGRPYQLIVAE- 194 (314)
T ss_dssp CCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE-EEESS-EEEEEEEECTTSCEEEEEEEE-
T ss_pred CcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec-cCCCC-cceEEEecccCCCCCEEEEEE-
Confidence 8899999999988877665 578888876 5543332 22222 5788899 8865677776
Q ss_pred cCCCCceEEEEeCC-CCCC--ceeEeeecCC--CceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCC
Q psy14130 283 SRHSDRQVGLWDEN-DLNT--PLALETVDSS--SGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGA 357 (494)
Q Consensus 283 ~~~~d~~i~iwd~~-~~~~--~~~~~~~~~~--~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~ 357 (494)
..++.|.+||+. +... .......... ..+..++++++|+.+ ++...++.|.+||..+++....+. . ...
T Consensus 195 --~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~-v~~~~~~~i~~~d~~~g~~~~~~~-~--~~~ 268 (314)
T 1pjx_A 195 --TPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLL-VANWGSSHIEVFGPDGGQPKMRIR-C--PFE 268 (314)
T ss_dssp --TTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEE-EEEETTTEEEEECTTCBSCSEEEE-C--SSS
T ss_pred --CCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEE-EEEcCCCEEEEEcCCCCcEeEEEe-C--CCC
Confidence 568899999976 2211 0011222222 457789999999766 777778899999988666543321 1 235
Q ss_pred CeeEEEEecCCc-eeeeccc--eeEEEEeeC
Q psy14130 358 PQRGLGFMPKRG-CDVTQCE--IFRFFKLHT 385 (494)
Q Consensus 358 ~v~~~~~~p~~~-~~~~~~~--~~~~~~l~~ 385 (494)
.+.+++|+|++. +.++... .+..|++..
T Consensus 269 ~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 269 KPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 689999999998 5555544 555555543
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=5.8e-09 Score=96.52 Aligned_cols=215 Identities=10% Similarity=0.014 Sum_probs=145.0
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeE-EEEecCCCCceEEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEA-LTVIDCHPDVINCLSF 227 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~-~~~~~~h~~~v~~l~~ 227 (494)
+.|.+||.. +.. ....+..+...+.++++++++ .++++...++.|..||.. ++. ...+......+.++++
T Consensus 36 ~~v~~~d~~-~~~------~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~ 106 (299)
T 2z2n_A 36 NMISCINLD-GKI------TEYPLPTPDAKVMCLTISSDG-EVWFTENAANKIGRITKK-GIIKEYTLPNPDSAPYGITE 106 (299)
T ss_dssp TEEEEECTT-CCE------EEEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEE
T ss_pred CcEEEEcCC-CCe------EEecCCcccCceeeEEECCCC-CEEEeCCCCCeEEEECCC-CcEEEEeCCCcCCCceeeEE
Confidence 458888876 421 111222345678999999998 688877778899999986 432 2222234567899999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee
Q psy14130 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV 307 (494)
Q Consensus 228 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~ 307 (494)
+++|+++++...++.|..||. +++............+..+++.++ +.++++. ..++.|..||. +.. .......
T Consensus 107 ~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~-g~l~v~~---~~~~~i~~~~~-~g~-~~~~~~~ 179 (299)
T 2z2n_A 107 GPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSD-NALWFTE---NQNNAIGRITE-SGD-ITEFKIP 179 (299)
T ss_dssp CTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTT-SCEEEEE---TTTTEEEEECT-TCC-EEEEECS
T ss_pred CCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCC-CCEEEEe---CCCCEEEEEcC-CCc-EEEeeCC
Confidence 999998888878899999999 565433222212233778888877 5777776 46789999998 432 2222111
Q ss_pred cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEe
Q psy14130 308 DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKL 383 (494)
Q Consensus 308 ~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l 383 (494)
.....+..++++++++.+ ++...++.|.+||. +++. ..+ ........+.++++.|++.+.++. ++.+..|+.
T Consensus 180 ~~~~~~~~i~~~~~g~l~-v~~~~~~~i~~~~~-~g~~-~~~-~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 180 TPASGPVGITKGNDDALW-FVEIIGNKIGRITT-SGEI-TEF-KIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp STTCCEEEEEECTTSSEE-EEETTTTEEEEECT-TCCE-EEE-ECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET
T ss_pred CCCCcceeEEECCCCCEE-EEccCCceEEEECC-CCcE-EEE-ECCCCCCCceeEEECCCCCEEEeccCCceEEEECC
Confidence 233567889999998855 77667889999998 6653 222 111123568999999999887774 556666665
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.33 E-value=1e-09 Score=115.65 Aligned_cols=218 Identities=15% Similarity=0.078 Sum_probs=136.2
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCC--------------eEEEEECCCCeE--EE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDY--------------LIILWDVGKGEA--LT 213 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~--------------~v~iwd~~~~~~--~~ 213 (494)
+|++||+.++.. +.. ..+...+..++|+|+ . .|+.++.|+ .|++|++.++.. ..
T Consensus 190 ~i~v~dl~tg~~-------~~~-~~~~~~~~~~~wspD-~-~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~l 259 (741)
T 1yr2_A 190 TVKFVGVADGKP-------LAD-ELKWVKFSGLAWLGN-D-ALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQP 259 (741)
T ss_dssp EEEEEETTTCCE-------EEE-EEEEEESCCCEESTT-S-EEEEEECCCC--------CCCCCEEEEEETTSCGGGCEE
T ss_pred EEEEEECCCCCC-------CCc-cCCCceeccEEEECC-C-EEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEE
Confidence 599999998832 221 112222357899999 5 555555544 399999987652 22
Q ss_pred Eec--CCCCceEEEEEcCCCCEEEEEeCCC-----eEEEEeCCCC--ceEEEeeecCCCCceEEEEECCCCeEEEEEecC
Q psy14130 214 VID--CHPDVINCLSFNRDGSRLVTTCKDK-----TVRVLDPRTG--LVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSR 284 (494)
Q Consensus 214 ~~~--~h~~~v~~l~~~~~~~~l~s~~~d~-----~v~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 284 (494)
.+. .+...+.++.|+|||++|+..+.++ .|++||+.++ +....+..+... .... +.++++.++..+-..
T Consensus 260 v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~-~~~~-~~~dg~~l~~~s~~~ 337 (741)
T 1yr2_A 260 VFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKA-QWDF-VDGVGDQLWFVSGDG 337 (741)
T ss_dssp EECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSS-CEEE-EEEETTEEEEEECTT
T ss_pred EeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCc-eEEE-EeccCCEEEEEECCC
Confidence 333 3444688999999999988877544 8999999877 314555555544 3333 347777787776211
Q ss_pred CCCceEEEEeCCCCC-CceeEeeecCC-CceEEeEEeCCCCEEEEEEeCCCcEEEEEee-CCCceEEecccccCCCCeeE
Q psy14130 285 HSDRQVGLWDENDLN-TPLALETVDSS-SGVLFPYYDHDTRILFLAGKGDGNIRYYELT-NERPYIHFLNQSLSGAPQRG 361 (494)
Q Consensus 285 ~~d~~i~iwd~~~~~-~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~-~~~~~~~~~~~~~~~~~v~~ 361 (494)
..++.|.+||+.+.. ....+ ..+. ..+..+.++ +..++++...|+..++|.+. +++.. ..+. ......+.+
T Consensus 338 ~~~~~l~~~d~~~~~~~~~~l--~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~-~~l~-~~~~~~v~~ 411 (741)
T 1yr2_A 338 APLKKIVRVDLSGSTPRFDTV--VPESKDNLESVGIA--GNRLFASYIHDAKSQVLAFDLDGKPA-GAVS-LPGIGSASG 411 (741)
T ss_dssp CTTCEEEEEECSSSSCEEEEE--ECCCSSEEEEEEEE--BTEEEEEEEETTEEEEEEEETTSCEE-EECB-CSSSCEEEE
T ss_pred CCCCEEEEEeCCCCccccEEE--ecCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCce-eecc-CCCCeEEEE
Confidence 235679999987642 11112 2232 334456665 55666888899998888776 34432 2222 222456889
Q ss_pred EEEecCCceeee------ccceeEEEEeeC
Q psy14130 362 LGFMPKRGCDVT------QCEIFRFFKLHT 385 (494)
Q Consensus 362 ~~~~p~~~~~~~------~~~~~~~~~l~~ 385 (494)
++++|++..++. ....+.+|++.+
T Consensus 412 ~~~s~d~~~l~~~~ss~~~P~~i~~~d~~t 441 (741)
T 1yr2_A 412 LSGRPGDRHAYLSFSSFTQPATVLALDPAT 441 (741)
T ss_dssp EECCBTCSCEEEEEEETTEEEEEEEEETTT
T ss_pred eecCCCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 999998875542 145677777655
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=99.32 E-value=2.5e-09 Score=102.50 Aligned_cols=212 Identities=8% Similarity=-0.050 Sum_probs=134.9
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEe----------CCCeEEEEECCCCeEEEEecCC-
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAG----------FDYLIILWDVGKGEALTVIDCH- 218 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s----------~d~~v~iwd~~~~~~~~~~~~h- 218 (494)
.|.++|..++ +.+..+.....+ .++++|++ +.|+.+. .++.|.+||..+.+.+..+...
T Consensus 48 ~v~v~D~~t~-------~~~~~i~~g~~p--~i~~spDg-~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~ 117 (373)
T 2mad_H 48 QQWVLDAGSG-------SILGHVNGGFLP--NPVAAHSG-SEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPD 117 (373)
T ss_pred EEEEEECCCC-------eEEEEecCCCCC--CeEECCCC-CEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCC
Confidence 6899999887 334444433333 89999999 5666554 3678999999988877766422
Q ss_pred ------CCceEEEEEcCCCCEEEEEeC--CCeEEEEeCCCCceEEE-eeecCCCCceEEEEECCCCeEEEEEecCCCC--
Q psy14130 219 ------PDVINCLSFNRDGSRLVTTCK--DKTVRVLDPRTGLVISQ-GVCHPGTRSSKAVFIGDTGRIVTTGFSRHSD-- 287 (494)
Q Consensus 219 ------~~~v~~l~~~~~~~~l~s~~~--d~~v~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d-- 287 (494)
......+.|+|||++|+.+.. ++.|.++| .+++.+.. +.... ++.+.+++.+.+++. +.|
T Consensus 118 ~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~-----~~~~~~~~~~~~~~~---~~dg~ 188 (373)
T 2mad_H 118 APRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT-----CYHIHPGAPSTFYLL---CAQGG 188 (373)
T ss_pred ccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc-----eEEEEeCCCceEEEE---cCCCC
Confidence 133568999999999998874 57899999 99988777 53211 112222222222222 233
Q ss_pred ---------------------------------------------ceEEEEeCCCCCCceeEeeec-----------CCC
Q psy14130 288 ---------------------------------------------RQVGLWDENDLNTPLALETVD-----------SSS 311 (494)
Q Consensus 288 ---------------------------------------------~~i~iwd~~~~~~~~~~~~~~-----------~~~ 311 (494)
+.+.+.|+....... ...+. ...
T Consensus 189 ~~~vd~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v-~~~~~~~~~~~~~~~~~p~ 267 (373)
T 2mad_H 189 LAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATN-KAPIDALSGGRKADTWRPG 267 (373)
T ss_pred EEEEECCCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceE-eeeeeecCCcccccceecC
Confidence 344444443221100 00000 012
Q ss_pred ceEEeEEeCCCCEEEEEEe---------CCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCc-eeee-c--ccee
Q psy14130 312 GVLFPYYDHDTRILFLAGK---------GDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRG-CDVT-Q--CEIF 378 (494)
Q Consensus 312 ~v~~~~~~~~~~~l~~~g~---------~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~-~~~~-~--~~~~ 378 (494)
+...+.++|+++.+|++.. .++.|.++|+.+.+.+..+ ..+....+++|+||+. .+++ . ++.+
T Consensus 268 g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i----~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V 343 (373)
T 2mad_H 268 GWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQI----SLGHDVDAISVAQDGGPDLYALSAGTEVL 343 (373)
T ss_pred ceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEE----ECCCCcCeEEECCCCCeEEEEEcCCCCeE
Confidence 2334778999999988754 2467999999998765443 2244689999999988 4444 2 6788
Q ss_pred EEEEeeC
Q psy14130 379 RFFKLHT 385 (494)
Q Consensus 379 ~~~~l~~ 385 (494)
.++++.+
T Consensus 344 ~ViD~~t 350 (373)
T 2mad_H 344 HIYDAGA 350 (373)
T ss_pred EEEECCC
Confidence 8898877
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=5.7e-10 Score=112.59 Aligned_cols=188 Identities=13% Similarity=0.012 Sum_probs=143.5
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCC--CCceEEEeeecCCCCceE
Q psy14130 190 NVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPR--TGLVISQGVCHPGTRSSK 267 (494)
Q Consensus 190 ~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~--~~~~~~~~~~~~~~~~~~ 267 (494)
.++++...++.|.++|..+++.+.++.. ...+..+.|+|||+++++++.|+.|.+||+. +++.+.++..... ...
T Consensus 168 ~~~V~~~~~~~V~viD~~t~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~--P~~ 244 (567)
T 1qks_A 168 LFSVTLRDAGQIALIDGSTYEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSE--ARS 244 (567)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSE--EEE
T ss_pred eEEEEeCCCCeEEEEECCCCeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCC--Cce
Confidence 5777888899999999999999888873 4467799999999999999999999999996 7888877765433 578
Q ss_pred EEEE----CCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec---------CCCceEEeEEeCCCCEEEEEEeCCCc
Q psy14130 268 AVFI----GDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD---------SSSGVLFPYYDHDTRILFLAGKGDGN 334 (494)
Q Consensus 268 ~~~~----~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~---------~~~~v~~~~~~~~~~~l~~~g~~dg~ 334 (494)
++++ |++.+++++. ..+++|.++|..+.+....+.... ....+..+..++++..++++...+|.
T Consensus 245 ia~s~~~~pDGk~l~v~n---~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~ 321 (567)
T 1qks_A 245 IETSKMEGWEDKYAIAGA---YWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGK 321 (567)
T ss_dssp EEECCSTTCTTTEEEEEE---EETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTE
T ss_pred eEEccccCCCCCEEEEEE---ccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCe
Confidence 8999 5877888887 478999999988755433222111 02256778889998888788888899
Q ss_pred EEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec---cceeEEEEeeC
Q psy14130 335 IRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ---CEIFRFFKLHT 385 (494)
Q Consensus 335 i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~---~~~~~~~~l~~ 385 (494)
|.++|....+.+. ...........++.|+|++.+++.. +..+.++++.+
T Consensus 322 v~~vd~~~~~~~~--v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t 373 (567)
T 1qks_A 322 ILLVDYTDLNNLK--TTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKE 373 (567)
T ss_dssp EEEEETTCSSEEE--EEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTT
T ss_pred EEEEecCCCccce--eeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCC
Confidence 9999988765322 2223334567889999999876542 67788888876
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=99.20 E-value=5.6e-08 Score=89.85 Aligned_cols=215 Identities=7% Similarity=-0.034 Sum_probs=143.4
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEE-EEecCCCCceEEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEAL-TVIDCHPDVINCLSF 227 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~-~~~~~h~~~v~~l~~ 227 (494)
+.|.+|+.. +... ...+..+...+.++++.+++ +++++...++.|..+|.. ++.. ..+......+.++++
T Consensus 41 ~~v~~~~~~-~~~~------~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~ 111 (300)
T 2qc5_A 41 NKISSLDQS-GRIK------EFEVPTPDAKVMCLIVSSLG-DIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITE 111 (300)
T ss_dssp TEEEEECTT-SCEE------EEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEE
T ss_pred CeEEEECCC-CceE------EEECCCCCCcceeEEECCCC-CEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceE
Confidence 468888876 4211 11223344678999999998 677777778899999987 5543 223334567899999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee
Q psy14130 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV 307 (494)
Q Consensus 228 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~ 307 (494)
+++|+++++...++.|..+|.. ++............+..+++.++ +.++++. ..++.|..+|. +.. .......
T Consensus 112 ~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~-g~l~v~~---~~~~~i~~~~~-~g~-~~~~~~~ 184 (300)
T 2qc5_A 112 GLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSD-NALWFTE---NQNNSIGRITN-TGK-LEEYPLP 184 (300)
T ss_dssp CSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTT-SSEEEEE---TTTTEEEEECT-TCC-EEEEECS
T ss_pred CCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCC-CCEEEEe---cCCCeEEEECC-CCc-EEEeeCC
Confidence 9999988887778899999988 66442222212233778888887 4577766 46788999998 322 2222211
Q ss_pred cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEe
Q psy14130 308 DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKL 383 (494)
Q Consensus 308 ~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l 383 (494)
.....+..++++++++.+ ++....+.|.+||. +++....... .....+.++++.+++.+.++. ++.+..|+.
T Consensus 185 ~~~~~~~~i~~d~~g~l~-v~~~~~~~i~~~~~-~g~~~~~~~~--~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 185 TNAAAPVGITSGNDGALW-FVEIMGNKIGRITT-TGEISEYDIP--TPNARPHAITAGKNSEIWFTEWGANQIGRITN 258 (300)
T ss_dssp STTCCEEEEEECTTSSEE-EEETTTTEEEEECT-TCCEEEEECS--STTCCEEEEEECSTTCEEEEETTTTEEEEECT
T ss_pred CCCCCcceEEECCCCCEE-EEccCCCEEEEEcC-CCcEEEEECC--CCCCCceEEEECCCCCEEEeccCCCeEEEECC
Confidence 233567889999998655 77666778999998 5543222121 123568899999999887776 455666654
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=99.19 E-value=5.4e-09 Score=101.60 Aligned_cols=198 Identities=13% Similarity=0.058 Sum_probs=135.7
Q ss_pred ccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCC--eEEEEeCCCCceE
Q psy14130 177 RRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDK--TVRVLDPRTGLVI 254 (494)
Q Consensus 177 ~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~--~v~iwd~~~~~~~ 254 (494)
.....|+|++++ +++++...++.|++||+.++........ ..... ++|+++++.|+++..++ .|.++|...+...
T Consensus 131 ~~P~~la~d~~g-~lyv~d~~~~~I~~id~~~g~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~ 207 (409)
T 3hrp_A 131 KYMWGIAAVGNN-TVLAYQRDDPRVRLISVDDNKVTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAP 207 (409)
T ss_dssp CCEEEEEECSTT-EEEEEETTTTEEEEEETTTTEEEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCE
T ss_pred CCceEEEEeCCC-CEEEEecCCCcEEEEECCCCEEEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCcee
Confidence 357899999998 6888887789999999988876655554 33344 99999999999988866 8999998776543
Q ss_pred EEe---eecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEee--ecCCCce--E-EeEEeCCCCEEE
Q psy14130 255 SQG---VCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALET--VDSSSGV--L-FPYYDHDTRILF 326 (494)
Q Consensus 255 ~~~---~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~--~~~~~~v--~-~~~~~~~~~~l~ 326 (494)
..+ ..+....+..+++.|+++.++++. .++.|+.||..+... ..+.. ....... . .++|+|++..||
T Consensus 208 ~~~g~~~~~~~~~p~~iav~p~~g~lyv~d----~~~~I~~~d~~~~~~-~~~~~~~~~g~~~~~P~~~ia~~p~~g~ly 282 (409)
T 3hrp_A 208 TRIGQLGSTFSGKIGAVALDETEEWLYFVD----SNKNFGRFNVKTQEV-TLIKQLELSGSLGTNPGPYLIYYFVDSNFY 282 (409)
T ss_dssp EEEEECCTTSCSCCCBCEECTTSSEEEEEC----TTCEEEEEETTTCCE-EEEEECCCCSCCCCSSCCEEEEETTTTEEE
T ss_pred EEeeeccchhcCCcEEEEEeCCCCeEEEEE----CCCcEEEEECCCCCE-EEEecccccCCCCCCccccEEEeCCCCEEE
Confidence 333 121223367889999668888844 688999999876432 11211 1111112 2 899999877887
Q ss_pred EEEeCCCcEEEEEeeCCCceEEecccc------------cCCCCeeEEEEecCCceeeecc-ceeEEEEee
Q psy14130 327 LAGKGDGNIRYYELTNERPYIHFLNQS------------LSGAPQRGLGFMPKRGCDVTQC-EIFRFFKLH 384 (494)
Q Consensus 327 ~~g~~dg~i~~wd~~~~~~~~~~~~~~------------~~~~~v~~~~~~p~~~~~~~~~-~~~~~~~l~ 384 (494)
++...++.|+.|+.... ...+.... ..-....+++++|++.+.++.. +.-+|+.+.
T Consensus 283 v~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~ 351 (409)
T 3hrp_A 283 MSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLD 351 (409)
T ss_dssp EEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEE
T ss_pred EEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEE
Confidence 99888999999987643 12222111 0013478999999999888765 444555544
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=99.19 E-value=1.2e-08 Score=94.58 Aligned_cols=199 Identities=10% Similarity=0.007 Sum_probs=129.3
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecC----CCCceEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDC----HPDVINC 224 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~----h~~~v~~ 224 (494)
+.|..||..++.. ..+ .....+.+++++++| +++++ . +..|.+||..+++....... ....+..
T Consensus 35 ~~i~~~d~~~~~~--------~~~-~~~~~~~~i~~~~dG-~l~v~-~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~d 102 (297)
T 3g4e_A 35 KKVCRWDSFTKQV--------QRV-TMDAPVSSVALRQSG-GYVAT-I-GTKFCALNWKEQSAVVLATVDNDKKNNRFND 102 (297)
T ss_dssp TEEEEEETTTCCE--------EEE-ECSSCEEEEEEBTTS-SEEEE-E-TTEEEEEETTTTEEEEEEECCTTCSSEEEEE
T ss_pred CEEEEEECCCCcE--------EEE-eCCCceEEEEECCCC-CEEEE-E-CCeEEEEECCCCcEEEEEecCCCCCCCCCCC
Confidence 3688999876621 122 244679999999998 55554 3 56899999988865433321 1245789
Q ss_pred EEEcCCCCEEEEEeCC-----------CeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEE
Q psy14130 225 LSFNRDGSRLVTTCKD-----------KTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLW 293 (494)
Q Consensus 225 l~~~~~~~~l~s~~~d-----------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iw 293 (494)
++++|+|+++++...+ +.|..+|.. ++... +..+... ...++|+|++..++++. +.++.|.+|
T Consensus 103 i~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~-~~~~~~~-pngi~~spdg~~lyv~~---~~~~~i~~~ 176 (297)
T 3g4e_A 103 GKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKK-YFDQVDI-SNGLDWSLDHKIFYYID---SLSYSVDAF 176 (297)
T ss_dssp EEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEE-EEEEESB-EEEEEECTTSCEEEEEE---GGGTEEEEE
T ss_pred EEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEE-Eeecccc-ccceEEcCCCCEEEEec---CCCCcEEEE
Confidence 9999999977765322 344444543 33322 2222222 67899999977788887 678899999
Q ss_pred eCC--CCCCc--eeEeeec-CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEe-cC
Q psy14130 294 DEN--DLNTP--LALETVD-SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFM-PK 367 (494)
Q Consensus 294 d~~--~~~~~--~~~~~~~-~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~-p~ 367 (494)
|+. ++... ..+.... ....+..++++++|+.. ++...++.|..||..+++.+..+. . ....+++++|. |+
T Consensus 177 ~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lw-va~~~~~~v~~~d~~tG~~~~~i~-~--p~~~~t~~~f~g~d 252 (297)
T 3g4e_A 177 DYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLW-VACYNGGRVIRLDPVTGKRLQTVK-L--PVDKTTSCCFGGKN 252 (297)
T ss_dssp EECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEE-EEEETTTEEEEECTTTCCEEEEEE-C--SSSBEEEEEEESGG
T ss_pred eccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEE-EEEcCCCEEEEEcCCCceEEEEEE-C--CCCCceEEEEeCCC
Confidence 874 32211 1111111 22456788999999755 777778889999998887643332 1 12468999998 77
Q ss_pred Cc
Q psy14130 368 RG 369 (494)
Q Consensus 368 ~~ 369 (494)
+.
T Consensus 253 ~~ 254 (297)
T 3g4e_A 253 YS 254 (297)
T ss_dssp GC
T ss_pred CC
Confidence 65
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=99.19 E-value=1.8e-08 Score=94.07 Aligned_cols=189 Identities=9% Similarity=0.086 Sum_probs=119.9
Q ss_pred cEEEEEE-cCcEEEEEcCCCCCCCCcccceEecc-cccccEEEEEEcCCCCCEEEEEeCC---------------CeEEE
Q psy14130 141 GAFLVLP-IHRVKLWYIPDGGLSGNLNEWIMDLH-GHKRRVGYIEWHPTAENVVASAGFD---------------YLIIL 203 (494)
Q Consensus 141 g~~~~~~-~~~v~iw~~~~~~~~~~~~~~~~~~~-~h~~~V~~~~~~p~~~~~l~s~s~d---------------~~v~i 203 (494)
|.+.+.. .+.|.+||.. +.... +. ..... .....+.+++++++| +++++...+ +.|..
T Consensus 83 g~l~v~~~~~~l~~~d~~-g~~~~-~~--~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~~~~~~~~~~~~~~~~l~~ 157 (314)
T 1pjx_A 83 NQLFVADMRLGLLVVQTD-GTFEE-IA--KKDSEGRRMQGCNDCAFDYEG-NLWITAPAGEVAPADYTRSMQEKFGSIYC 157 (314)
T ss_dssp SEEEEEETTTEEEEEETT-SCEEE-CC--SBCTTSCBCBCCCEEEECTTS-CEEEEECBCBCTTSCCCBTTSSSCEEEEE
T ss_pred CcEEEEECCCCEEEEeCC-CCEEE-EE--eccCCCccccCCcCEEECCCC-CEEEEecCcccccccccccccCCCCeEEE
Confidence 3444433 2358888877 53210 00 00011 122457899999998 677776655 56777
Q ss_pred EECCCCeEEEEecCCCCceEEEEEc----CCCCEEEEE-eCCCeEEEEeCC-CCce-----EEEeeecCCCCceEEEEEC
Q psy14130 204 WDVGKGEALTVIDCHPDVINCLSFN----RDGSRLVTT-CKDKTVRVLDPR-TGLV-----ISQGVCHPGTRSSKAVFIG 272 (494)
Q Consensus 204 wd~~~~~~~~~~~~h~~~v~~l~~~----~~~~~l~s~-~~d~~v~iwd~~-~~~~-----~~~~~~~~~~~~~~~~~~~ 272 (494)
||.. ++..... .+......++|+ ++++.|+.+ ..++.|.+||+. +++. ...+..+....+..+++.+
T Consensus 158 ~~~~-g~~~~~~-~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~ 235 (314)
T 1pjx_A 158 FTTD-GQMIQVD-TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDE 235 (314)
T ss_dssp ECTT-SCEEEEE-EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBT
T ss_pred ECCC-CCEEEec-cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECC
Confidence 7775 5443332 234457889999 999765555 568899999986 4542 2222222202267788888
Q ss_pred CCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeC
Q psy14130 273 DTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTN 342 (494)
Q Consensus 273 ~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~ 342 (494)
+ +.++++. ..++.|.+||..+........ .+...+.+++++|+++.|+++...++.|..|++..
T Consensus 236 ~-G~l~v~~---~~~~~i~~~d~~~g~~~~~~~--~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 236 D-NNLLVAN---WGSSHIEVFGPDGGQPKMRIR--CPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp T-CCEEEEE---ETTTEEEEECTTCBSCSEEEE--CSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred C-CCEEEEE---cCCCEEEEEcCCCCcEeEEEe--CCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 7 4666665 367899999987544332222 13367889999999998878887888999999875
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=99.16 E-value=7.8e-10 Score=105.28 Aligned_cols=170 Identities=10% Similarity=-0.002 Sum_probs=120.8
Q ss_pred cCCcEEEEEEcCcEEEEEcCCCC-----CCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEE
Q psy14130 138 AGGGAFLVLPIHRVKLWYIPDGG-----LSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEAL 212 (494)
Q Consensus 138 ~~~g~~~~~~~~~v~iw~~~~~~-----~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~ 212 (494)
+..|.+++.+.+.+.+|++.+.. ....+ ++... ..+.. |+.++| ++ ++|+++ .++.|++||+.+....
T Consensus 47 ~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~-~~~~~-~~lp~-V~~l~f--d~-~~L~v~-~~~~l~v~dv~sl~~~ 119 (388)
T 1xip_A 47 NSKSLFVAASGSKAVVGELQLLRDHITSDSTPL-TFKWE-KEIPD-VIFVCF--HG-DQVLVS-TRNALYSLDLEELSEF 119 (388)
T ss_dssp TTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCC-CCSEE-EECTT-EEEEEE--ET-TEEEEE-ESSEEEEEESSSTTCE
T ss_pred CCCCEEEEeCCCEEEEEEhhHhhhhhccccccc-cceEE-eeCCC-eeEEEE--CC-CEEEEE-cCCcEEEEEchhhhcc
Confidence 45667777777789999975432 00001 22122 23566 999999 66 788888 7899999999876665
Q ss_pred EEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEE
Q psy14130 213 TVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGL 292 (494)
Q Consensus 213 ~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~i 292 (494)
.....|...+.++.+.+.. +++++.||.|.+||+.++.... +... +.+++|+|++ + +.| ..||.+++
T Consensus 120 ~~~~~~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~~~----~~~~-Vs~v~WSpkG--~-~vg---~~dg~i~~ 186 (388)
T 1xip_A 120 RTVTSFEKPVFQLKNVNNT--LVILNSVNDLSALDLRTKSTKQ----LAQN-VTSFDVTNSQ--L-AVL---LKDRSFQS 186 (388)
T ss_dssp EEEEECSSCEEEEEECSSE--EEEEETTSEEEEEETTTCCEEE----EEES-EEEEEECSSE--E-EEE---ETTSCEEE
T ss_pred CccceeecceeeEEecCCC--EEEEECCCCEEEEEccCCcccc----ccCC-ceEEEEcCCc--e-EEE---EcCCcEEE
Confidence 6666788889998887653 8889999999999999887643 2223 8999999995 3 445 47999999
Q ss_pred EeCCCCCC--ceeEe-------eecCCCceEEeEEeCCCCEEEE
Q psy14130 293 WDENDLNT--PLALE-------TVDSSSGVLFPYYDHDTRILFL 327 (494)
Q Consensus 293 wd~~~~~~--~~~~~-------~~~~~~~v~~~~~~~~~~~l~~ 327 (494)
|+...... ...+. ..++...|.++.|.+++.++++
T Consensus 187 ~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 187 FAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 98765431 11110 1125678999999999998844
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=6.3e-09 Score=108.58 Aligned_cols=184 Identities=12% Similarity=0.061 Sum_probs=119.4
Q ss_pred cEEEEEcCCCCCCCCcccceEeccc-ccccEEEEEEcCCCCCEEEEEeC---CCeEEEEECCCCe-EEEEecCCCCceEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHG-HKRRVGYIEWHPTAENVVASAGF---DYLIILWDVGKGE-ALTVIDCHPDVINC 224 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~-h~~~V~~~~~~p~~~~~l~s~s~---d~~v~iwd~~~~~-~~~~~~~h~~~v~~ 224 (494)
+|.+|++.++.... ..+..... |...+.++.|+|+|..++++.+. +..|.++|+.++. ....+..+......
T Consensus 209 ~v~~~~lgt~~~~~---~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~ 285 (693)
T 3iuj_A 209 KVYFHRLGTAQEDD---RLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVS 285 (693)
T ss_dssp EEEEEETTSCGGGC---EEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEE
T ss_pred EEEEEECCCCcccc---eEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEE
Confidence 58999988763210 12223334 55567899999999544455543 2589999997763 45556666666666
Q ss_pred EEEcCCCCEEEEEe-CC---CeEEEEeCCCCce--EEEeeecCCCCceEEEEECCCCeEEEEEecCCCCc--eEEEEeCC
Q psy14130 225 LSFNRDGSRLVTTC-KD---KTVRVLDPRTGLV--ISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDR--QVGLWDEN 296 (494)
Q Consensus 225 l~~~~~~~~l~s~~-~d---~~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~--~i~iwd~~ 296 (494)
. |+++|..|+..+ .+ +.|..+|+.++.. ...+..|... +. .|+++++.++.+. ..++ .|++||+.
T Consensus 286 ~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~-~~--~~s~~g~~lv~~~---~~~g~~~l~~~d~~ 358 (693)
T 3iuj_A 286 L-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQ-VL--TVHSGSGYLFAEY---MVDATARVEQFDYE 358 (693)
T ss_dssp E-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSS-CE--EEEEETTEEEEEE---EETTEEEEEEECTT
T ss_pred E-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCC-EE--EEEEECCEEEEEE---EECCeeEEEEEECC
Confidence 5 666666555444 33 6899999988764 3456666655 33 7888877777776 3454 68899987
Q ss_pred CCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCC---CcEEEEEeeCCCc
Q psy14130 297 DLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGD---GNIRYYELTNERP 345 (494)
Q Consensus 297 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~d---g~i~~wd~~~~~~ 345 (494)
.. . ......+....+..+.++++++.++++.+.. +.|+.||+.+++.
T Consensus 359 g~-~-~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 359 GK-R-VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp SC-E-EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred CC-e-eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 42 2 2222233445577788889998886655432 7899999887763
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=99.15 E-value=8.4e-09 Score=99.58 Aligned_cols=219 Identities=9% Similarity=-0.029 Sum_probs=139.8
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEe---------CCCeEEEEECCCCeEEEEecCC--
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAG---------FDYLIILWDVGKGEALTVIDCH-- 218 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s---------~d~~v~iwd~~~~~~~~~~~~h-- 218 (494)
.|.+.|..+. +.+.++.--..+ .++++|++..++++.. .++.|.++|..+++.+..+.-.
T Consensus 100 ~VsVID~~t~-------~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~ 170 (426)
T 3c75_H 100 QQFVIDGSTG-------RILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDA 170 (426)
T ss_dssp EEEEEETTTT-------EEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTC
T ss_pred eEEEEECCCC-------EEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCc
Confidence 6899999888 445555433444 8999999954444432 4678999999999988777521
Q ss_pred -----CCceEEEEEcCCCCEEEEEeC--CCeEEEEeCCCCceEEEeeecCC------CCceEEEEECC------------
Q psy14130 219 -----PDVINCLSFNRDGSRLVTTCK--DKTVRVLDPRTGLVISQGVCHPG------TRSSKAVFIGD------------ 273 (494)
Q Consensus 219 -----~~~v~~l~~~~~~~~l~s~~~--d~~v~iwd~~~~~~~~~~~~~~~------~~~~~~~~~~~------------ 273 (494)
......+.|+|||++++.+.. ++.|.+.|+.+++.+.++..... .....+.++++
T Consensus 171 ~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~ 250 (426)
T 3c75_H 171 PRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGE 250 (426)
T ss_dssp CCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTC
T ss_pred cccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCc
Confidence 234567899999999998874 58999999999998777653110 00111223333
Q ss_pred -------------------------CCeEEEEEecCCCCceEEEEeCCCCCCce--eEeee-----c---CCCceEEeEE
Q psy14130 274 -------------------------TGRIVTTGFSRHSDRQVGLWDENDLNTPL--ALETV-----D---SSSGVLFPYY 318 (494)
Q Consensus 274 -------------------------~~~l~~~g~~~~~d~~i~iwd~~~~~~~~--~~~~~-----~---~~~~v~~~~~ 318 (494)
++.++.+. ..+.|.+.|+....... ..... . ...+...+++
T Consensus 251 v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s----~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~ 326 (426)
T 3c75_H 251 TKVTNTEVFHTEDELLINHPAFSLRSGRLVWPT----YTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAY 326 (426)
T ss_dssp CEEEECCCCSCTTSCBCSCCEECTTTCEEEEEB----TTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEE
T ss_pred EEEEeeeeeccCCCceeeEeeecCCCCEEEEEe----CCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEE
Confidence 22223222 23455555554321000 00000 0 0011223689
Q ss_pred eCCCCEEEEEEeC---------CCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCc-eeee-c--cceeEEEEeeC
Q psy14130 319 DHDTRILFLAGKG---------DGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRG-CDVT-Q--CEIFRFFKLHT 385 (494)
Q Consensus 319 ~~~~~~l~~~g~~---------dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~-~~~~-~--~~~~~~~~l~~ 385 (494)
+|+++.+|++... ++.|.++|+.+.+.+.++.. +....+++|+||+. .+++ . ++.+.++|+.+
T Consensus 327 s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~v----g~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t 402 (426)
T 3c75_H 327 HRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIEL----GHEIDSINVSQDAEPLLYALSAGTQTLHIYDAAT 402 (426)
T ss_dssp EGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE----EEEECEEEECCSSSCEEEEEETTTTEEEEEETTT
T ss_pred cCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEEC----CCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCC
Confidence 9999999887532 35799999999987554422 33589999999987 5544 3 78899999887
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.12 E-value=1.1e-08 Score=107.72 Aligned_cols=203 Identities=11% Similarity=-0.025 Sum_probs=126.7
Q ss_pred cccccEEEEEEcCCCCCEEEEEeCC-----CeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCe------
Q psy14130 174 GHKRRVGYIEWHPTAENVVASAGFD-----YLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKT------ 242 (494)
Q Consensus 174 ~h~~~V~~~~~~p~~~~~l~s~s~d-----~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~------ 242 (494)
+|...+..++|||+| +.||.++.+ ..|++||+.+++.+.... +...+.+++|+|| +.|+.++.|+.
T Consensus 160 ~~~~~~~~~~~SPDG-~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~-~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~ 236 (741)
T 1yr2_A 160 DGATALDAWAASDDG-RLLAYSVQDGGSDWRTVKFVGVADGKPLADEL-KWVKFSGLAWLGN-DALLYSRFAEPKEGQAF 236 (741)
T ss_dssp ---EEEEEEEECTTS-SEEEEEEEETTCSEEEEEEEETTTCCEEEEEE-EEEESCCCEESTT-SEEEEEECCCC------
T ss_pred CCCEEEEeEEECCCC-CEEEEEEcCCCCceEEEEEEECCCCCCCCccC-CCceeccEEEECC-CEEEEEEecCccccccc
Confidence 344578899999999 566665543 469999999998654321 2222357899999 99988887654
Q ss_pred --------EEEEeCCCCce--EEEeeecCC-CCceEEEEECCCCeEEEEEecCC-CCceEEEEeCCCCC-C-ceeEeeec
Q psy14130 243 --------VRVLDPRTGLV--ISQGVCHPG-TRSSKAVFIGDTGRIVTTGFSRH-SDRQVGLWDENDLN-T-PLALETVD 308 (494)
Q Consensus 243 --------v~iwd~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~l~~~g~~~~-~d~~i~iwd~~~~~-~-~~~~~~~~ 308 (494)
|++|++.++.. ...+..... .....+.|+|++..++.++.... ....|++||+.+.. . ...+. .
T Consensus 237 ~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~--~ 314 (741)
T 1yr2_A 237 QALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALI--P 314 (741)
T ss_dssp --CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEE--C
T ss_pred ccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEec--C
Confidence 89999987762 222222221 12678899999777777662110 24589999987651 1 22222 2
Q ss_pred CCCceEEeEEeCCCCEEEEEEeC---CCcEEEEEeeCCC-ceEEecccccCCCCeeEEEEecCCceeee--ccceeEEEE
Q psy14130 309 SSSGVLFPYYDHDTRILFLAGKG---DGNIRYYELTNER-PYIHFLNQSLSGAPQRGLGFMPKRGCDVT--QCEIFRFFK 382 (494)
Q Consensus 309 ~~~~v~~~~~~~~~~~l~~~g~~---dg~i~~wd~~~~~-~~~~~~~~~~~~~~v~~~~~~p~~~~~~~--~~~~~~~~~ 382 (494)
........ ++|+++.|++.... ++.|.+||+.++. ....++... ...+.+++|. ++.++++ .++..++|.
T Consensus 315 ~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~--~~~l~~~~~~-~~~lv~~~~~dg~~~l~~ 390 (741)
T 1yr2_A 315 DLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPES--KDNLESVGIA-GNRLFASYIHDAKSQVLA 390 (741)
T ss_dssp SSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCC--SSEEEEEEEE-BTEEEEEEEETTEEEEEE
T ss_pred CCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCC--CCeEEEEEEE-CCEEEEEEEECCEEEEEE
Confidence 33334444 45899988665533 3459999988752 333444332 3356778888 4444444 378888888
Q ss_pred eeC
Q psy14130 383 LHT 385 (494)
Q Consensus 383 l~~ 385 (494)
+..
T Consensus 391 ~~~ 393 (741)
T 1yr2_A 391 FDL 393 (741)
T ss_dssp EET
T ss_pred EeC
Confidence 774
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.09 E-value=2.7e-08 Score=92.71 Aligned_cols=203 Identities=10% Similarity=0.020 Sum_probs=132.1
Q ss_pred cccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy14130 172 LHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTG 251 (494)
Q Consensus 172 ~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~ 251 (494)
+..+........|+|++..++++...++.|..|+. +++ ...+..+...+.+++++++|+++++...++.|.+||.. +
T Consensus 40 l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g 116 (305)
T 3dr2_A 40 LYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-G 116 (305)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred EecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-C
Confidence 33345567789999998547888888999999998 454 34455566789999999999977766667899999986 6
Q ss_pred ceEEEeeecC---CCCceEEEEECCCCeEEEE----EecC----------CCCceEEEEeCCCCCCceeEeeecCCCceE
Q psy14130 252 LVISQGVCHP---GTRSSKAVFIGDTGRIVTT----GFSR----------HSDRQVGLWDENDLNTPLALETVDSSSGVL 314 (494)
Q Consensus 252 ~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~----g~~~----------~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~ 314 (494)
+......... ...+..+++.++ +.++++ |... ...+.|..||..+....... ......
T Consensus 117 ~~~~~~~~~~~~~~~~~~~i~~d~d-G~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~----~~~~p~ 191 (305)
T 3dr2_A 117 QAHLLVGRYAGKRLNSPNDLIVARD-GAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA----DLDHPN 191 (305)
T ss_dssp CEEEEECEETTEECSCCCCEEECTT-SCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE----EESSEE
T ss_pred CEEEEEeccCCCccCCCCCEEECCC-CCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe----cCCCCc
Confidence 5322211111 112567888888 556664 3000 01356788887554332221 223467
Q ss_pred EeEEeCCCCEEEEEEeC-----CCcEEEEEeeCCCce-EEecccccCCCCeeEEEEecCCceeeeccceeEEEEe
Q psy14130 315 FPYYDHDTRILFLAGKG-----DGNIRYYELTNERPY-IHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKL 383 (494)
Q Consensus 315 ~~~~~~~~~~l~~~g~~-----dg~i~~wd~~~~~~~-~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l 383 (494)
.++|+||++.|+++.+. .+.|.+|++..+... ....... ......++++.++|.+.++..+.+.+|+.
T Consensus 192 gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~-~~~~pdgi~~d~~G~lwv~~~~gv~~~~~ 265 (305)
T 3dr2_A 192 GLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASV-PDGLPDGFCVDRGGWLWSSSGTGVCVFDS 265 (305)
T ss_dssp EEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECC-SSSCCCSEEECTTSCEEECCSSEEEEECT
T ss_pred ceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEEC-CCCCCCeEEECCCCCEEEecCCcEEEECC
Confidence 78999999988776654 378999999865410 0111111 13346789999999987776555666665
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.07 E-value=2e-08 Score=95.95 Aligned_cols=217 Identities=15% Similarity=0.011 Sum_probs=140.7
Q ss_pred CcEEEEEcCCCCCCCCcccceEecc------c-ccccEEEEEEcCCCCCEEEEEeCC------CeEEEEECCCCeEEEEe
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLH------G-HKRRVGYIEWHPTAENVVASAGFD------YLIILWDVGKGEALTVI 215 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~------~-h~~~V~~~~~~p~~~~~l~s~s~d------~~v~iwd~~~~~~~~~~ 215 (494)
++|.++|+.+....- +...+++ . ....-..+...|+| +++++..+ +.|.+.|..+.+.+.++
T Consensus 106 ~~I~viD~~t~p~~p---~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~ 180 (462)
T 2ece_A 106 SRIYIIDTKPNPREP---KIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEGEGPGGILMLDHYSFEPLGKW 180 (462)
T ss_dssp CCEEEEECCSCTTSC---EEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTSCSCCEEEEECTTTCCEEEEC
T ss_pred CeEEEEECCCCCCCc---eeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcCCCCCCeEEEEECCCCeEEEEE
Confidence 369999987542211 2222221 0 11234567788997 66676655 78999999999999888
Q ss_pred cCCC---CceEEEEEcCCCCEEEEEe-------------------CCCeEEEEeCCCCceEEEeeec-CCCCceEEEE--
Q psy14130 216 DCHP---DVINCLSFNRDGSRLVTTC-------------------KDKTVRVLDPRTGLVISQGVCH-PGTRSSKAVF-- 270 (494)
Q Consensus 216 ~~h~---~~v~~l~~~~~~~~l~s~~-------------------~d~~v~iwd~~~~~~~~~~~~~-~~~~~~~~~~-- 270 (494)
.... ..-+.+.|+|+++.+++.. .+.+|.+||+.+++.++++... .+.....+.|
T Consensus 181 ~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~ 260 (462)
T 2ece_A 181 EIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLH 260 (462)
T ss_dssp CSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECS
T ss_pred ccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeE
Confidence 6321 2245688999999888885 3689999999999888887653 2222344545
Q ss_pred ECCCCeEEEEEecCC-----CCceEEEEeCCCCCCceeEee--ecC-----------------CCceEEeEEeCCCCEEE
Q psy14130 271 IGDTGRIVTTGFSRH-----SDRQVGLWDENDLNTPLALET--VDS-----------------SSGVLFPYYDHDTRILF 326 (494)
Q Consensus 271 ~~~~~~l~~~g~~~~-----~d~~i~iwd~~~~~~~~~~~~--~~~-----------------~~~v~~~~~~~~~~~l~ 326 (494)
+|++...+++. . .+++|.+|....+. ...... +.. ......+.+++||++||
T Consensus 261 ~Pdg~~aYV~~---e~~~~~Lss~V~v~~~d~g~-~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLY 336 (462)
T 2ece_A 261 DPTKLMGFINM---VVSLKDLSSSIWLWFYEDGK-WNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLY 336 (462)
T ss_dssp STTCCEEEEEE---EEETTTCCEEEEEEEEETTE-EEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEE
T ss_pred CCCCCEEEEEE---eeeccCCCceEEEEEecCCc-eeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEE
Confidence 88876666666 4 56788776544311 000010 000 23466789999999999
Q ss_pred EEEeCCCcEEEEEeeCCCceEEecccccCC---------------CCeeEEEEecCCceeeecc
Q psy14130 327 LAGKGDGNIRYYELTNERPYIHFLNQSLSG---------------APQRGLGFMPKRGCDVTQC 375 (494)
Q Consensus 327 ~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~---------------~~v~~~~~~p~~~~~~~~~ 375 (494)
++.-..+.|.+||+..... .+.+.....+ ...+.++++|||..+...+
T Consensus 337 VSnrg~d~VavfdV~d~~~-~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 337 LSLWGIGEVRQYDISNPFK-PVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp EEETTTTEEEEEECSSTTS-CEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EEeCCCCEEEEEEecCCCC-cEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 9999999999999964321 1222222212 1358899999998766554
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=99.07 E-value=6.7e-08 Score=91.59 Aligned_cols=223 Identities=10% Similarity=0.033 Sum_probs=144.2
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccc-------cccEEEEEEcCCCCCEEEEEeC--CCeEEEEECCCCeEEEEecCCC
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGH-------KRRVGYIEWHPTAENVVASAGF--DYLIILWDVGKGEALTVIDCHP 219 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h-------~~~V~~~~~~p~~~~~l~s~s~--d~~v~iwd~~~~~~~~~~~~h~ 219 (494)
+.|.+||..+.+ .+.++.-. ...-..++|+|+| ++|+.+.. ++.|.++|+.+++.+.++...
T Consensus 109 ~~VsviD~~t~~-------v~~~I~v~~g~r~~~g~~P~~~a~spDG-k~lyVan~~~~~~VsVID~~t~~vv~tI~v~- 179 (386)
T 3sjl_D 109 DYVEVFDPVTLL-------PTADIELPDAPRFLVGTYPWMTSLTPDG-KTLLFYQFSPAPAVGVVDLEGKAFKRMLDVP- 179 (386)
T ss_dssp EEEEEECTTTCC-------EEEEEEETTCCCCCBSCCGGGEEECTTS-SEEEEEECSSSCEEEEEETTTTEEEEEEECC-
T ss_pred CEEEEEECCCCe-------EEEEEECCCccccccCCCCceEEEcCCC-CEEEEEEcCCCCeEEEEECCCCcEEEEEECC-
Confidence 469999999884 33333211 1134578999999 56665543 689999999999999888632
Q ss_pred CceEEEEEcCCCCEEEEEeCCCeEEEEeCCC-CceEEEeeecC----CCCceEEEEECCCCeEEEEEecCCCCceEEEEe
Q psy14130 220 DVINCLSFNRDGSRLVTTCKDKTVRVLDPRT-GLVISQGVCHP----GTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWD 294 (494)
Q Consensus 220 ~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd 294 (494)
+ . ...+....+.+++.+.||++.+.++.+ ++.......+. ........|.+.+++++... .+++|.+.|
T Consensus 180 g-~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs----~~g~V~v~d 253 (386)
T 3sjl_D 180 D-C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPT----YTGKIHQID 253 (386)
T ss_dssp S-E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEB----TTSEEEEEE
T ss_pred C-c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEe----CCCEEEEEE
Confidence 2 1 233433566788889999999999986 66533221111 11112246665557776666 579999999
Q ss_pred CCCCCCceeEeeec-----------CCCceEEeEEeCCCCEEEEEEeC---------CCcEEEEEeeCCCceEEeccccc
Q psy14130 295 ENDLNTPLALETVD-----------SSSGVLFPYYDHDTRILFLAGKG---------DGNIRYYELTNERPYIHFLNQSL 354 (494)
Q Consensus 295 ~~~~~~~~~~~~~~-----------~~~~v~~~~~~~~~~~l~~~g~~---------dg~i~~wd~~~~~~~~~~~~~~~ 354 (494)
+.+.... ....+. ...+...++++++++.+|++-.. .+.|.++|+.+.+.+.++..
T Consensus 254 ~~~~~~~-v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v--- 329 (386)
T 3sjl_D 254 LSSGDAK-FLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM--- 329 (386)
T ss_dssp CTTSSCE-ECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE---
T ss_pred CCCCcce-eecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEEC---
Confidence 8754321 111110 01233457789999999887532 25799999999987655433
Q ss_pred CCCCeeEEEEecCCc-e-eeec--cceeEEEEeeCCCCeEEE
Q psy14130 355 SGAPQRGLGFMPKRG-C-DVTQ--CEIFRFFKLHTTRNMCEP 392 (494)
Q Consensus 355 ~~~~v~~~~~~p~~~-~-~~~~--~~~~~~~~l~~~~~~~~~ 392 (494)
+..+.+++++||+. . +++. ++.+.+++..+.+ .+..
T Consensus 330 -g~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k-~~~~ 369 (386)
T 3sjl_D 330 -GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGE-ELRS 369 (386)
T ss_dssp -EEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCC-EEEE
T ss_pred -CCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCc-EEEE
Confidence 34688999999986 4 4433 7889999988733 4443
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=99.07 E-value=1.7e-07 Score=86.85 Aligned_cols=204 Identities=8% Similarity=0.013 Sum_probs=130.2
Q ss_pred ccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceE
Q psy14130 175 HKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVI 254 (494)
Q Consensus 175 h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~ 254 (494)
+..--.+..|+|++..++++...++.|..||..+++. ..+. ....+.+++++++|+++++. ++.|.+||..+++..
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~~ 86 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQSGGYVATI--GTKFCALNWKEQSAV 86 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEEE
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECCCCCEEEEE--CCeEEEEECCCCcEE
Confidence 3344568899997656888888889999999987764 3343 45789999999999965553 568999999888743
Q ss_pred EEeeec---CCCCceEEEEECCCCeEEEEEecCCC------CceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEE
Q psy14130 255 SQGVCH---PGTRSSKAVFIGDTGRIVTTGFSRHS------DRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRIL 325 (494)
Q Consensus 255 ~~~~~~---~~~~~~~~~~~~~~~~l~~~g~~~~~------d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 325 (494)
...... ....+..+++.+++ +++++...... ...-.||.+......... .........++|+||++.|
T Consensus 87 ~~~~~~~~~~~~~~~di~~d~dG-~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~--~~~~~~pngi~~spdg~~l 163 (297)
T 3g4e_A 87 VLATVDNDKKNNRFNDGKVDPAG-RYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKY--FDQVDISNGLDWSLDHKIF 163 (297)
T ss_dssp EEEECCTTCSSEEEEEEEECTTS-CEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEE--EEEESBEEEEEECTTSCEE
T ss_pred EEEecCCCCCCCCCCCEEECCCC-CEEEecCCcccccccccCCCcEEEEEECCCCEEEE--eeccccccceEEcCCCCEE
Confidence 322221 11235678888885 45554421110 122344444322222111 1223456789999999999
Q ss_pred EEEEeCCCcEEEEEee--CCCceE-Eecccc-cCCCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 326 FLAGKGDGNIRYYELT--NERPYI-HFLNQS-LSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 326 ~~~g~~dg~i~~wd~~--~~~~~~-~~~~~~-~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
|++.+.++.|.+||+. ++.... +.+..+ .......++++.++|.+.++. ++.+..|+..+
T Consensus 164 yv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~t 229 (297)
T 3g4e_A 164 YYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVT 229 (297)
T ss_dssp EEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTT
T ss_pred EEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCC
Confidence 8998889999999984 454211 111111 123457899999999887775 45566666553
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=99.06 E-value=2.5e-08 Score=94.57 Aligned_cols=195 Identities=12% Similarity=-0.012 Sum_probs=127.1
Q ss_pred cccccEEEEEEcCCCCCEEEEEeC-----CCeEEEEECCCCeEEEEecCC------CCceEEEEEcCCCCE-EEEEe---
Q psy14130 174 GHKRRVGYIEWHPTAENVVASAGF-----DYLIILWDVGKGEALTVIDCH------PDVINCLSFNRDGSR-LVTTC--- 238 (494)
Q Consensus 174 ~h~~~V~~~~~~p~~~~~l~s~s~-----d~~v~iwd~~~~~~~~~~~~h------~~~v~~l~~~~~~~~-l~s~~--- 238 (494)
+|-..+.++++++++ +++++-.. ++.|.+||+.+++.+..+... ...+..+++++++.. +++..
T Consensus 64 ~~~~~p~gv~~d~~g-~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~ 142 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNG-IVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPD 142 (343)
T ss_dssp CCCSCEEEEEECSSS-EEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSG
T ss_pred cceeEeeEEEEcCCC-cEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccC
Confidence 466789999999997 56665433 578999999999877766532 245689999986544 45554
Q ss_pred CCCeEEEEeCCCCceEEEeeecCC----------------------------CCceEEEEECCCCeEEEEEecCCCCceE
Q psy14130 239 KDKTVRVLDPRTGLVISQGVCHPG----------------------------TRSSKAVFIGDTGRIVTTGFSRHSDRQV 290 (494)
Q Consensus 239 ~d~~v~iwd~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~l~~~g~~~~~d~~i 290 (494)
.++.|.+||+.+++....+..|.. ..+..+++++++..++++. ...+.+
T Consensus 143 ~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~---~~~~~l 219 (343)
T 2qe8_A 143 DKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSP---MHSTSM 219 (343)
T ss_dssp GGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEE---SSCSEE
T ss_pred CCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEe---CCCCeE
Confidence 678999999998886655533210 1146788999876777766 444566
Q ss_pred EEEeCC---CCCCc-----eeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEE
Q psy14130 291 GLWDEN---DLNTP-----LALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGL 362 (494)
Q Consensus 291 ~iwd~~---~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~ 362 (494)
..++.. ..... ..+...........++++++|..+ ++...++.|.+||..+++. .... .......+.++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~-va~~~~~~V~~~d~~~G~~-~~~~-~~~~~~~p~~v 296 (343)
T 2qe8_A 220 YRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIY-VGDLAHSAIGVITSADRAY-KLLV-TDEKLSWTDSF 296 (343)
T ss_dssp EEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEE-EEEGGGTEEEEEETTTTEE-EEEE-ECGGGSCEEEE
T ss_pred EEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEE-EEccCCCeEEEEECCCCCE-EEEE-ECCceecCCee
Confidence 666532 11100 001111122345568899998755 8888899999999855542 2222 11123457899
Q ss_pred EEecCCceeeecc
Q psy14130 363 GFMPKRGCDVTQC 375 (494)
Q Consensus 363 ~~~p~~~~~~~~~ 375 (494)
+|.|++.+.++..
T Consensus 297 a~~~~g~l~v~~~ 309 (343)
T 2qe8_A 297 NFGSDGYLYFDCN 309 (343)
T ss_dssp EECTTSCEEEEEC
T ss_pred EECCCCcEEEEeC
Confidence 9999987776654
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=4.9e-08 Score=101.85 Aligned_cols=217 Identities=9% Similarity=0.026 Sum_probs=134.8
Q ss_pred cEEEEEcCCCCCCCCcccceEeccccccc--EEEEEEcCCCCCEEEEEeCCC-------------eEEEEECCCCeE--E
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRR--VGYIEWHPTAENVVASAGFDY-------------LIILWDVGKGEA--L 212 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~--V~~~~~~p~~~~~l~s~s~d~-------------~v~iwd~~~~~~--~ 212 (494)
.|++||+.+++ .+.. +... ...++|+ ++ +.|+.++.+. .|++|++.++.. .
T Consensus 156 ~i~v~dl~tg~-------~~~~---~~~~~k~~~~~Ws-Dg-~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~ 223 (693)
T 3iuj_A 156 EIHLMDVESKQ-------PLET---PLKDVKFSGISWL-GN-EGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDR 223 (693)
T ss_dssp EEEEEETTTCS-------EEEE---EEEEEESCCCEEE-TT-TEEEEEESSCCC-------CCCCEEEEEETTSCGGGCE
T ss_pred EEEEEECCCCC-------CCcc---ccCCceeccEEEe-CC-CEEEEEEecCcccccccccCCCcEEEEEECCCCcccce
Confidence 59999999983 2221 2222 3578899 98 5676666663 499999987642 2
Q ss_pred EEe--cC-CCCceEEEEEcCCCCEEEEEeC----CCeEEEEeCCCCc-eEEEeeecCCCCceEEEEECCCCeEEEEEecC
Q psy14130 213 TVI--DC-HPDVINCLSFNRDGSRLVTTCK----DKTVRVLDPRTGL-VISQGVCHPGTRSSKAVFIGDTGRIVTTGFSR 284 (494)
Q Consensus 213 ~~~--~~-h~~~v~~l~~~~~~~~l~s~~~----d~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 284 (494)
..+ .. |...+.++.|+|||++|+.... +..|+++|+.++. ....+..+... .... +.++++.++..+-..
T Consensus 224 ~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~-~~~~-~~~~g~~l~~~t~~~ 301 (693)
T 3iuj_A 224 LVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDA-DVSL-VDNKGSTLYLLTNRD 301 (693)
T ss_dssp EEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSS-CEEE-EEEETTEEEEEECTT
T ss_pred EEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCc-eEEE-EeccCCEEEEEECCC
Confidence 233 33 4556789999999998765442 3589999998774 34555555554 3333 667778888777211
Q ss_pred CCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCC--cEEEEEeeCCCceEEecccccCCCCeeEE
Q psy14130 285 HSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDG--NIRYYELTNERPYIHFLNQSLSGAPQRGL 362 (494)
Q Consensus 285 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg--~i~~wd~~~~~~~~~~~~~~~~~~~v~~~ 362 (494)
...+.|..+|+.+.....-.....+...+. .|+++++.|+++...++ .|++||+..+.. ..+. ......+..+
T Consensus 302 ~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~--~~l~-~p~~~~~~~~ 376 (693)
T 3iuj_A 302 APNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKRV--REVA-LPGLGSVSGF 376 (693)
T ss_dssp CTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSCEE--EEEC-CSSSSEEEEC
T ss_pred CCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCCee--EEee-cCCCceEEee
Confidence 124689999998754311111223444454 89999999977766666 578888775432 2221 1223456777
Q ss_pred EEecCCceeeec--c----ceeEEEEeeC
Q psy14130 363 GFMPKRGCDVTQ--C----EIFRFFKLHT 385 (494)
Q Consensus 363 ~~~p~~~~~~~~--~----~~~~~~~l~~ 385 (494)
.++|++..++.. + ..+..|++..
T Consensus 377 ~~~~d~~~l~~~~ss~~tP~~l~~~d~~~ 405 (693)
T 3iuj_A 377 NGKHDDPALYFGFENYAQPPTLYRFEPKS 405 (693)
T ss_dssp CCCTTCSCEEEEEECSSSCCEEEEECTTT
T ss_pred ecCCCCCEEEEEecCCCCCCEEEEEECCC
Confidence 788877654432 2 4555555544
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=99.03 E-value=2.3e-07 Score=87.25 Aligned_cols=198 Identities=12% Similarity=0.051 Sum_probs=126.8
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecC----CCCceEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDC----HPDVINC 224 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~----h~~~v~~ 224 (494)
+.|..||..++. . ..+. ....+.+++|+|++ +++++. .+ .|.+||..+++....... ....+.+
T Consensus 71 ~~i~~~d~~~~~-------~-~~~~-~~~~v~~i~~~~dg-~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~ 138 (326)
T 2ghs_A 71 RELHELHLASGR-------K-TVHA-LPFMGSALAKISDS-KQLIAS-DD-GLFLRDTATGVLTLHAELESDLPGNRSND 138 (326)
T ss_dssp TEEEEEETTTTE-------E-EEEE-CSSCEEEEEEEETT-EEEEEE-TT-EEEEEETTTCCEEEEECSSTTCTTEEEEE
T ss_pred CEEEEEECCCCc-------E-EEEE-CCCcceEEEEeCCC-eEEEEE-CC-CEEEEECCCCcEEEEeeCCCCCCCCCCCC
Confidence 468889887652 1 1122 34579999999998 566654 44 599999988775433221 1236889
Q ss_pred EEEcCCCCEEEEEeC------CCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCC--
Q psy14130 225 LSFNRDGSRLVTTCK------DKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEN-- 296 (494)
Q Consensus 225 l~~~~~~~~l~s~~~------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~-- 296 (494)
++++|+|+++++... .+.|..+| +++.. .+..+... ...++|++++..++++. ..++.|.+||+.
T Consensus 139 i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~~~~~-~~~i~~s~dg~~lyv~~---~~~~~I~~~d~~~~ 211 (326)
T 2ghs_A 139 GRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFADISI-PNSICFSPDGTTGYFVD---TKVNRLMRVPLDAR 211 (326)
T ss_dssp EEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEEEESS-EEEEEECTTSCEEEEEE---TTTCEEEEEEBCTT
T ss_pred EEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeCCCcc-cCCeEEcCCCCEEEEEE---CCCCEEEEEEcccc
Confidence 999999997776543 24566666 45533 23222222 67889999977777777 567899999985
Q ss_pred CC-CC--ceeEeeec-CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEe-cCCce
Q psy14130 297 DL-NT--PLALETVD-SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFM-PKRGC 370 (494)
Q Consensus 297 ~~-~~--~~~~~~~~-~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~-p~~~~ 370 (494)
++ .. ...+.... ....+..++++++|... ++...++.|..||. +++.+..+ .. ....+.+++|. |++..
T Consensus 212 ~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lw-va~~~~~~v~~~d~-~g~~~~~i-~~--~~~~~~~~af~g~d~~~ 285 (326)
T 2ghs_A 212 TGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIW-NARWGEGAVDRYDT-DGNHIARY-EV--PGKQTTCPAFIGPDASR 285 (326)
T ss_dssp TCCBSSCCEEEEECTTSSSEEEEEEECTTSCEE-EEEETTTEEEEECT-TCCEEEEE-EC--SCSBEEEEEEESTTSCE
T ss_pred cCCcccCceEEEECCCCCCCCCeeEECCCCCEE-EEEeCCCEEEEECC-CCCEEEEE-EC--CCCCcEEEEEecCCCCE
Confidence 33 21 11222221 22446678999999766 66667788999998 55543322 11 13458999998 77653
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=99.01 E-value=1.4e-07 Score=89.48 Aligned_cols=201 Identities=12% Similarity=0.008 Sum_probs=126.7
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEe---------CCCeEEEEECCCCeEEEEecCC--
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAG---------FDYLIILWDVGKGEALTVIDCH-- 218 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s---------~d~~v~iwd~~~~~~~~~~~~h-- 218 (494)
.|.+.|..+. +.+.++.....+ . ++++|+|..++++.+ .++.|.+||..+.+.+..+.-.
T Consensus 60 ~V~ViD~~t~-------~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g 130 (386)
T 3sjl_D 60 QQFVIDGEAG-------RVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDA 130 (386)
T ss_dssp EEEEEETTTT-------EEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTC
T ss_pred EEEEEECCCC-------eEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCc
Confidence 6899999887 445555434444 4 999999954444432 3678999999999988877522
Q ss_pred -----CCceEEEEEcCCCCEEEEEeC--CCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCC-eEEEEEecCCCCceE
Q psy14130 219 -----PDVINCLSFNRDGSRLVTTCK--DKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTG-RIVTTGFSRHSDRQV 290 (494)
Q Consensus 219 -----~~~v~~l~~~~~~~~l~s~~~--d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~d~~i 290 (494)
......++|+|||++++.+.. ++.|.++|+.+++.+.++.... ....+ |.+. .+++.+ .||.+
T Consensus 131 ~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g----~~~~~-P~g~~~~~~~~----~DG~~ 201 (386)
T 3sjl_D 131 PRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD----CYHIF-PTAPDTFFMHC----RDGSL 201 (386)
T ss_dssp CCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS----EEEEE-EEETTEEEEEE----TTSCE
T ss_pred cccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC----cceee-cCCCceeEEEC----CCCCE
Confidence 124667999999999988864 6899999999999988885421 12223 4334 344444 78999
Q ss_pred EEEeCCCCCCceeEe--eecCC-Cce-EEeEEe-CCCCEEEEEEeCCCcEEEEEeeCCCceEEeccccc-----------
Q psy14130 291 GLWDENDLNTPLALE--TVDSS-SGV-LFPYYD-HDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSL----------- 354 (494)
Q Consensus 291 ~iwd~~~~~~~~~~~--~~~~~-~~v-~~~~~~-~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~----------- 354 (494)
.+.++.+........ .++.. ..+ ..+.|. ++|+++|++ .+|.|++.|+.++... ......
T Consensus 202 ~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs--~~g~V~v~d~~~~~~~--v~~~~~~~~~~~~~~g~ 277 (386)
T 3sjl_D 202 AKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPT--YTGKIHQIDLSSGDAK--FLPAVEALTEAERADGW 277 (386)
T ss_dssp EEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEB--TTSEEEEEECTTSSCE--ECCCEESSCHHHHHTTE
T ss_pred EEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEe--CCCEEEEEECCCCcce--eecceeccccccccccc
Confidence 999987522222111 11111 111 124665 677766543 4789999999776531 111110
Q ss_pred CCCCeeEEEEecCCceee
Q psy14130 355 SGAPQRGLGFMPKRGCDV 372 (494)
Q Consensus 355 ~~~~v~~~~~~p~~~~~~ 372 (494)
.......++++|++..+.
T Consensus 278 ~p~g~q~~a~~~~~~~ly 295 (386)
T 3sjl_D 278 RPGGWQQVAYHRALDRIY 295 (386)
T ss_dssp EECSSSCEEEETTTTEEE
T ss_pred cCCCcceeeECCCCCeEE
Confidence 122345678888766443
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=98.99 E-value=7.8e-07 Score=85.08 Aligned_cols=184 Identities=11% Similarity=-0.033 Sum_probs=116.3
Q ss_pred CcEEEEEcCCCCCCCCcccceEe-cccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEec-----CCCCce
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMD-LHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVID-----CHPDVI 222 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~-~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-----~h~~~v 222 (494)
+.|.++| .+++ .+.. +.. .. ++.+.|.+...+++.+.||.+.++|. +++.+.... ....++
T Consensus 148 ~~v~viD-~t~~-------~~~~~i~~-~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~ 214 (373)
T 2mad_H 148 PAVGLVV-QGGS-------SDDQLLSS-PT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNL 214 (373)
T ss_pred CeEEEEE-CCCC-------EEeEEcCC-Cc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcce
Confidence 4689999 8773 3333 221 11 35566776667888889999999999 877663322 112222
Q ss_pred -EEEEEcCCCCEEEEEeCCCeEEEEeCCCCc--eEEEeeecC---------CCCceEEEEECCCCeEEEEEecC------
Q psy14130 223 -NCLSFNRDGSRLVTTCKDKTVRVLDPRTGL--VISQGVCHP---------GTRSSKAVFIGDTGRIVTTGFSR------ 284 (494)
Q Consensus 223 -~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~--~~~~~~~~~---------~~~~~~~~~~~~~~~l~~~g~~~------ 284 (494)
....+.+++..++..+.++.+.+.|+..+. .+..+.... ......+.+++++++++++.-..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~ 294 (373)
T 2mad_H 215 LTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLH 294 (373)
T ss_pred eecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCccccc
Confidence 234567766665555578899999997653 223322111 01023367888877877765100
Q ss_pred CCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCC-EEEEEEeCCCcEEEEEeeCCCceEE
Q psy14130 285 HSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTR-ILFLAGKGDGNIRYYELTNERPYIH 348 (494)
Q Consensus 285 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~g~~dg~i~~wd~~~~~~~~~ 348 (494)
...+.|.++|+.+.+.... +........++|+|||+ .+|++...++.|.+||+.+++.+..
T Consensus 295 ~~~~~V~VID~~t~~vv~~---i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 295 AAAKEVTSVTGLVGQTSSQ---ISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred CCCCeEEEEECCCCEEEEE---EECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 0236899999987554332 33444688999999999 6645444699999999999887544
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=98.98 E-value=4.9e-07 Score=84.95 Aligned_cols=195 Identities=11% Similarity=0.000 Sum_probs=125.9
Q ss_pred EEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEee
Q psy14130 179 VGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGV 258 (494)
Q Consensus 179 V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~ 258 (494)
..+..|+|++..++++...++.|..||..+++.. .+. ....+.+++|+++|+++++. . ..|.+||..+++......
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~~~~~ 126 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVLTLHAE 126 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEEEEEC
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcEEEEee
Confidence 4578899986567888888899999999887643 333 35689999999999877764 3 459999998887533222
Q ss_pred e---cCCCCceEEEEECCCCeEEEEEecC---CCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCC
Q psy14130 259 C---HPGTRSSKAVFIGDTGRIVTTGFSR---HSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGD 332 (494)
Q Consensus 259 ~---~~~~~~~~~~~~~~~~~l~~~g~~~---~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~d 332 (494)
. .....+..+.+.+++ +++++.... ...+.|..+| +.. ...+ .........++|+|+++.|+++.+.+
T Consensus 127 ~~~~~~~~~~~~i~~d~~G-~l~v~~~~~~~~~~~~~l~~~~--~g~-~~~~--~~~~~~~~~i~~s~dg~~lyv~~~~~ 200 (326)
T 2ghs_A 127 LESDLPGNRSNDGRMHPSG-ALWIGTMGRKAETGAGSIYHVA--KGK-VTKL--FADISIPNSICFSPDGTTGYFVDTKV 200 (326)
T ss_dssp SSTTCTTEEEEEEEECTTS-CEEEEEEETTCCTTCEEEEEEE--TTE-EEEE--EEEESSEEEEEECTTSCEEEEEETTT
T ss_pred CCCCCCCCCCCCEEECCCC-CEEEEeCCCcCCCCceEEEEEe--CCc-EEEe--eCCCcccCCeEEcCCCCEEEEEECCC
Confidence 1 111236778888885 455544100 0124566666 322 1111 11223466889999999988888788
Q ss_pred CcEEEEEee--CC-Cce-EEecccc-cCCCCeeEEEEecCCceeeec--cceeEEEEe
Q psy14130 333 GNIRYYELT--NE-RPY-IHFLNQS-LSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKL 383 (494)
Q Consensus 333 g~i~~wd~~--~~-~~~-~~~~~~~-~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l 383 (494)
+.|.+||+. ++ +.. ...+..+ .......++++.++|.+.++. ++.+..|+.
T Consensus 201 ~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~ 258 (326)
T 2ghs_A 201 NRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT 258 (326)
T ss_dssp CEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT
T ss_pred CEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC
Confidence 999999986 55 311 0111111 112456889999999887775 456666665
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=98.95 E-value=2.9e-06 Score=77.07 Aligned_cols=225 Identities=11% Similarity=-0.047 Sum_probs=140.0
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEE
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSF 227 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~ 227 (494)
.+.|+.+++....... + .....+......+.+++|++++..++++-..++.|..+|+..+.....+........++++
T Consensus 9 ~~~I~~~~~~g~~~~~-~-~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~ 86 (267)
T 1npe_A 9 TGKIERLPLERNTMKK-T-EAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIAL 86 (267)
T ss_dssp EEEEEEEEESSSCBCG-G-GCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEE
T ss_pred CCeEEEEEecCccccc-c-cceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEE
Confidence 3468888877653210 0 0011122223457899999976566667667889999999765543334333357889999
Q ss_pred cCCCCEEEEE-eCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCC--CceEEEEeCCCCCCceeE
Q psy14130 228 NRDGSRLVTT-CKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHS--DRQVGLWDENDLNTPLAL 304 (494)
Q Consensus 228 ~~~~~~l~s~-~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~--d~~i~iwd~~~~~~~~~~ 304 (494)
++++..|+.+ ...+.|.++|+..... ..+..........+++.++++.++++. .. .+.|..+++..... ..+
T Consensus 87 d~~~~~lyv~d~~~~~I~~~~~~g~~~-~~~~~~~~~~P~~i~vd~~~g~lyv~~---~~~~~~~I~~~~~dg~~~-~~~ 161 (267)
T 1npe_A 87 DHLGRTIFWTDSQLDRIEVAKMDGTQR-RVLFDTGLVNPRGIVTDPVRGNLYWTD---WNRDNPKIETSHMDGTNR-RIL 161 (267)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSSCSSEEEEEEETTTTEEEEEE---CCSSSCEEEEEETTSCCC-EEE
T ss_pred EecCCeEEEEECCCCEEEEEEcCCCCE-EEEEECCCCCccEEEEeeCCCEEEEEE---CCCCCcEEEEEecCCCCc-EEE
Confidence 9976555544 4578999999874432 222222212378899999778888877 33 46888888764222 222
Q ss_pred eeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEE
Q psy14130 305 ETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFK 382 (494)
Q Consensus 305 ~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~ 382 (494)
.. ........++++++++.||++-...+.|.++|...... ...... .....+++.. .+.+.++. .+.+..++
T Consensus 162 ~~-~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-~~~~~~---~~~P~gi~~d-~~~lyva~~~~~~v~~~d 235 (267)
T 1npe_A 162 AQ-DNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGR-RKVLEG---LQYPFAVTSY-GKNLYYTDWKTNSVIAMD 235 (267)
T ss_dssp EC-TTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEE-EEEEEC---CCSEEEEEEE-TTEEEEEETTTTEEEEEE
T ss_pred EE-CCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCce-EEEecC---CCCceEEEEe-CCEEEEEECCCCeEEEEe
Confidence 11 22345778999999999989988889999999875432 222221 2334677765 45555554 34454454
Q ss_pred eeC
Q psy14130 383 LHT 385 (494)
Q Consensus 383 l~~ 385 (494)
..+
T Consensus 236 ~~~ 238 (267)
T 1npe_A 236 LAI 238 (267)
T ss_dssp TTT
T ss_pred CCC
Confidence 433
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=98.94 E-value=2e-07 Score=89.06 Aligned_cols=198 Identities=9% Similarity=0.027 Sum_probs=132.3
Q ss_pred CCCCCEEEEEeCCCeEEEEECCCC----eEEEEec-------CCCCceEEEEEcCCCCEEEEEeCC------CeEEEEeC
Q psy14130 186 PTAENVVASAGFDYLIILWDVGKG----EALTVID-------CHPDVINCLSFNRDGSRLVTTCKD------KTVRVLDP 248 (494)
Q Consensus 186 p~~~~~l~s~s~d~~v~iwd~~~~----~~~~~~~-------~h~~~v~~l~~~~~~~~l~s~~~d------~~v~iwd~ 248 (494)
++...+++++..++.|.++|+.+. +...+++ ........+...|+| +++++..+ +.|.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 777667777888899999999755 6666663 112245678899999 77777666 78999999
Q ss_pred CCCceEEEeeecCCC--CceEEEEECCCCeEEEEEec----------C-----CCCceEEEEeCCCCCCceeEeeec-CC
Q psy14130 249 RTGLVISQGVCHPGT--RSSKAVFIGDTGRIVTTGFS----------R-----HSDRQVGLWDENDLNTPLALETVD-SS 310 (494)
Q Consensus 249 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~g~~----------~-----~~d~~i~iwd~~~~~~~~~~~~~~-~~ 310 (494)
.+.+.+.++...... ....+.|+|+++.++++.|. - ..+.+|.+||+.+.+ ........ ..
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k-~~~tI~vg~~g 250 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRK-RIHSLTLGEEN 250 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTE-EEEEEESCTTE
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCc-EeeEEecCCCC
Confidence 999999888633222 13457889997766666320 0 126899999998742 22222221 11
Q ss_pred CceEEeE--EeCCCCEEEEEEe-----CCCcEEEEEeeCCCceEEe---cccc--c------------CCCCeeEEEEec
Q psy14130 311 SGVLFPY--YDHDTRILFLAGK-----GDGNIRYYELTNERPYIHF---LNQS--L------------SGAPQRGLGFMP 366 (494)
Q Consensus 311 ~~v~~~~--~~~~~~~l~~~g~-----~dg~i~~wd~~~~~~~~~~---~~~~--~------------~~~~v~~~~~~p 366 (494)
.....+. |+|+++++|+++- .+++|.+|....++..... +... . ......++.++|
T Consensus 251 ~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~ 330 (462)
T 2ece_A 251 RMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISL 330 (462)
T ss_dssp EEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECT
T ss_pred CccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECC
Confidence 2344444 4999999999888 8889988887654311110 0110 0 024578999999
Q ss_pred CCceeeec---cceeEEEEeeC
Q psy14130 367 KRGCDVTQ---CEIFRFFKLHT 385 (494)
Q Consensus 367 ~~~~~~~~---~~~~~~~~l~~ 385 (494)
|+.++-.+ .+.+.+|++..
T Consensus 331 DGrfLYVSnrg~d~VavfdV~d 352 (462)
T 2ece_A 331 DDKFLYLSLWGIGEVRQYDISN 352 (462)
T ss_dssp TSCEEEEEETTTTEEEEEECSS
T ss_pred CCCEEEEEeCCCCEEEEEEecC
Confidence 99876553 77899999864
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=98.94 E-value=6.9e-07 Score=80.14 Aligned_cols=194 Identities=9% Similarity=-0.044 Sum_probs=129.6
Q ss_pred EEEEEEcCCCCCEEEEEeC--CCeEEEEECCCCeEEEEecCCC-CceEEEEEcCCCCEEEEE-eCCCeEEEEeCCCCceE
Q psy14130 179 VGYIEWHPTAENVVASAGF--DYLIILWDVGKGEALTVIDCHP-DVINCLSFNRDGSRLVTT-CKDKTVRVLDPRTGLVI 254 (494)
Q Consensus 179 V~~~~~~p~~~~~l~s~s~--d~~v~iwd~~~~~~~~~~~~h~-~~v~~l~~~~~~~~l~s~-~~d~~v~iwd~~~~~~~ 254 (494)
...++|++++ .++++.+. ++.|.+.|+.+++.+..+.-.. .....+++. +..|+.+ -.++.+.++|..+.+.+
T Consensus 23 ~~Gl~~~~dg-~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~ 99 (266)
T 2iwa_A 23 TQGLVYAEND-TLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNI 99 (266)
T ss_dssp EEEEEECSTT-EEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEE
T ss_pred cccEEEeCCC-eEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEE
Confidence 5789999986 56666553 5799999999999888875221 122345554 4455544 46889999999999998
Q ss_pred EEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCC---CceEEeEEeCCCCEEEEEEeC
Q psy14130 255 SQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSS---SGVLFPYYDHDTRILFLAGKG 331 (494)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~g~~ 331 (494)
.++... .. ......+++++++++. .++.|.++|..+.+....+..-... ..+..+.|. ++ .+|+....
T Consensus 100 ~~i~~g-~~--~g~glt~Dg~~l~vs~----gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg-~lyvn~~~ 170 (266)
T 2iwa_A 100 KNFTHQ-MK--DGWGLATDGKILYGSD----GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NG-EVWANIWQ 170 (266)
T ss_dssp EEEECC-SS--SCCEEEECSSSEEEEC----SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT-EEEEEETT
T ss_pred EEEECC-CC--CeEEEEECCCEEEEEC----CCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CC-EEEEecCC
Confidence 888644 12 1233455767777654 5789999999886654443322211 235567777 66 67688777
Q ss_pred CCcEEEEEeeCCCceEEecc-cc---------cCCCCeeEEEEecCCc-eeeeccceeEEEEee
Q psy14130 332 DGNIRYYELTNERPYIHFLN-QS---------LSGAPQRGLGFMPKRG-CDVTQCEIFRFFKLH 384 (494)
Q Consensus 332 dg~i~~wd~~~~~~~~~~~~-~~---------~~~~~v~~~~~~p~~~-~~~~~~~~~~~~~l~ 384 (494)
++.|.+.|..+++....+-. .. .......+++|+|++. +++++...-+++.+.
T Consensus 171 ~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~ 234 (266)
T 2iwa_A 171 TDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIK 234 (266)
T ss_dssp SSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEE
T ss_pred CCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEE
Confidence 89999999999987554422 11 1123568999999875 566664444555443
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=98.93 E-value=5e-08 Score=92.48 Aligned_cols=205 Identities=9% Similarity=-0.012 Sum_probs=128.5
Q ss_pred ccEEEEEEcCCCCCEEEEEe--CCCeEEEEECCCCeEEEEec-------CCCCceEEEEEcCCCCEEEEEeC-----CCe
Q psy14130 177 RRVGYIEWHPTAENVVASAG--FDYLIILWDVGKGEALTVID-------CHPDVINCLSFNRDGSRLVTTCK-----DKT 242 (494)
Q Consensus 177 ~~V~~~~~~p~~~~~l~s~s--~d~~v~iwd~~~~~~~~~~~-------~h~~~v~~l~~~~~~~~l~s~~~-----d~~ 242 (494)
..+..++++|+| +++++.. .++.++||.+.+++. ..+. .|-..+.+++++++|+++++-.. +..
T Consensus 17 ~~p~~va~~~~g-~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLTPDG-RLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEECTTS-CEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCE
T ss_pred CCcceEEECCCC-CEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCe
Confidence 678999999998 6888864 234355665545543 3231 24567999999999987666544 579
Q ss_pred EEEEeCCCCceEEEeeecC-----CCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEee-----------
Q psy14130 243 VRVLDPRTGLVISQGVCHP-----GTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALET----------- 306 (494)
Q Consensus 243 v~iwd~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~----------- 306 (494)
|.+||+.+++.+..+.... ......+++.++++.++++..+...++.|.+||+.+.........
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~ 174 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDL 174 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCC
T ss_pred EEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccce
Confidence 9999999998777665431 122578899887678888871101678999999875432111100
Q ss_pred -ec---------------CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeC---CCc----eEEecccccCCCCeeEEE
Q psy14130 307 -VD---------------SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTN---ERP----YIHFLNQSLSGAPQRGLG 363 (494)
Q Consensus 307 -~~---------------~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~---~~~----~~~~~~~~~~~~~v~~~~ 363 (494)
.+ ....+..++++|+++.||++......|..++... +.. +...+..........+++
T Consensus 175 ~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia 254 (343)
T 2qe8_A 175 VIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGIS 254 (343)
T ss_dssp EETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEE
T ss_pred eECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEE
Confidence 00 0123577999999999977655444555555321 110 000000001123567899
Q ss_pred EecCCceeeec--cceeEEEEe
Q psy14130 364 FMPKRGCDVTQ--CEIFRFFKL 383 (494)
Q Consensus 364 ~~p~~~~~~~~--~~~~~~~~l 383 (494)
+.++|.+.++. ++.+..|+.
T Consensus 255 ~d~~G~l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 255 IDKDHNIYVGDLAHSAIGVITS 276 (343)
T ss_dssp ECTTCCEEEEEGGGTEEEEEET
T ss_pred ECCCCCEEEEccCCCeEEEEEC
Confidence 99999888885 567777776
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=98.93 E-value=4.3e-08 Score=93.02 Aligned_cols=214 Identities=7% Similarity=-0.055 Sum_probs=131.6
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEe---------CCCeEEEEECCCCeEEEEecCC--
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAG---------FDYLIILWDVGKGEALTVIDCH-- 218 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s---------~d~~v~iwd~~~~~~~~~~~~h-- 218 (494)
+|.+.|..+. +.+.++.....+ .+.++|++..+.++.+ .++.|.+||+.+++.+.++...
T Consensus 47 ~vsvID~~t~-------~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~ 117 (368)
T 1mda_H 47 ENWVSCAGCG-------VTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDA 117 (368)
T ss_dssp EEEEEETTTT-------EEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTS
T ss_pred eEEEEECCCC-------eEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCc
Confidence 5788999888 555555544445 7999999954444432 4789999999999999888633
Q ss_pred -----CCceEEEEEcCCCCEEEEEeC--CCeEEE--EeCCCCceEEEeeecCCCC------ceEEEE-------------
Q psy14130 219 -----PDVINCLSFNRDGSRLVTTCK--DKTVRV--LDPRTGLVISQGVCHPGTR------SSKAVF------------- 270 (494)
Q Consensus 219 -----~~~v~~l~~~~~~~~l~s~~~--d~~v~i--wd~~~~~~~~~~~~~~~~~------~~~~~~------------- 270 (494)
......++++|||++++.+.. +..+.+ +|+.+ +.++....... ..-+..
T Consensus 118 ~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~ 194 (368)
T 1mda_H 118 PRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAA 194 (368)
T ss_dssp CSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCS
T ss_pred cccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECcc
Confidence 134568999999999998874 467888 99876 23332100000 000011
Q ss_pred ------------------------ECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec--------C---CCceEE
Q psy14130 271 ------------------------IGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD--------S---SSGVLF 315 (494)
Q Consensus 271 ------------------------~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~--------~---~~~v~~ 315 (494)
.++++.++.+. . +.|.+.|+...... ....+. . ..+...
T Consensus 195 ~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs----~-~~V~viD~~~~~~~-v~~~~~~~~~~~~~~~~~p~g~~~ 268 (368)
T 1mda_H 195 APAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAV----A-SSILQGDIPAAGAT-MKAAIDGNESGRKADNFRSAGFQM 268 (368)
T ss_dssp SCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECB----S-SCCEEEECCSSCCE-EECCCCSSCTHHHHTTEEECSSSC
T ss_pred ccccCCeEEEEeeeeeeCCCCccccccCCEEEEEc----C-CEEEEEECCCCcce-EEEEEEeccccccccccccCccee
Confidence 22223333333 2 55666665432110 011000 0 011122
Q ss_pred eEEeCCCCEEEEEEe---C-----CCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCc-eeee-c--cceeEEEEe
Q psy14130 316 PYYDHDTRILFLAGK---G-----DGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRG-CDVT-Q--CEIFRFFKL 383 (494)
Q Consensus 316 ~~~~~~~~~l~~~g~---~-----dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~-~~~~-~--~~~~~~~~l 383 (494)
++++||++.+|++.. . ++.+.++|+.+.+.+.++. .+....+++|+||+. ++++ . ++.+.++++
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~----vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~ 344 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPIS----NGHDSDAIIAAQDGASDNYANSAGTEVLDIYDA 344 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCE----EEEEECEEEECCSSSCEEEEEETTTTEEEEEES
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEE----CCCCcceEEECCCCCEEEEEccCCCCeEEEEEC
Confidence 679999999987754 2 2356699999987643332 233589999999987 3443 3 688999998
Q ss_pred eC
Q psy14130 384 HT 385 (494)
Q Consensus 384 ~~ 385 (494)
.+
T Consensus 345 ~t 346 (368)
T 1mda_H 345 AS 346 (368)
T ss_dssp SS
T ss_pred CC
Confidence 87
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.89 E-value=7.6e-10 Score=106.16 Aligned_cols=192 Identities=11% Similarity=0.007 Sum_probs=99.4
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCC-ceE-EEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPD-VIN-CLS 226 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~-~v~-~l~ 226 (494)
+.|..||..+++ .+-.+.. ..+.+..+..++ .++++++.|+.|+.||..+|+.+..+..+.. .+. +..
T Consensus 19 g~v~a~d~~tG~-------~~W~~~~--~~~~s~p~~~~g-~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~ 88 (369)
T 2hz6_A 19 GSLHAVSKRTGS-------IKWTLKE--DPVLQVPTHVEE-PAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPC 88 (369)
T ss_dssp SEEEEEETTTCC-------EEEEEEC--CCSCCCC------CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSC
T ss_pred CEEEEEECCCCC-------EEEEecC--CCceecceEcCC-CEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCce
Confidence 579999999884 3333333 344444455665 5788888999999999999987766653321 110 011
Q ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEee
Q psy14130 227 FNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALET 306 (494)
Q Consensus 227 ~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~ 306 (494)
+. ++..+++++.|+.|+.||.++|+.+..+..+.. ..++|+++.+++.+ .++.|+.||.++++..-....
T Consensus 89 ~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~-----~~~~p~~~~v~~~~----~dg~v~a~d~~tG~~~W~~~~ 158 (369)
T 2hz6_A 89 RS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA-----DSLSPSTSLLYLGR----TEYTITMYDTKTRELRWNATY 158 (369)
T ss_dssp C------CCCCEEEEEEEEECCC---------------------------EEEEE----EEEEEECCCSSSSSCCCEEEE
T ss_pred Ee-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc-----ccccccCCEEEEEe----cCCEEEEEECCCCCEEEeEec
Confidence 11 345778888999999999999998877765532 23345545555544 789999999988765443322
Q ss_pred ecCCCceEEeEEeCCC---CEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeE-EEEecCCc
Q psy14130 307 VDSSSGVLFPYYDHDT---RILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRG-LGFMPKRG 369 (494)
Q Consensus 307 ~~~~~~v~~~~~~~~~---~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~-~~~~p~~~ 369 (494)
.. ...+.++.+. ..+ ++++.||.|+.||..+++.+.... ...++.. .++++++.
T Consensus 159 ~~----~~~~~~~~~~~~~~~v-~~~~~dg~v~a~d~~tG~~~W~~~----~~~pv~~~~~~~~dg~ 216 (369)
T 2hz6_A 159 FD----YAASLPEDDVDYKMSH-FVSNGDGLVVTVDSESGDVLWIQN----YASPVVAFYVWQREGL 216 (369)
T ss_dssp EE----ECCBCCCCCTTCCCCE-EEEETSCEEEEECTTTCCEEEEEE----CSSCEEEEEECTTSSC
T ss_pred cc----ccCccccCCccccceE-EEECCCCEEEEEECCCCcEEEEec----CCCceEEEEEecCCce
Confidence 11 2233444432 445 457789999999999998654432 2344443 44556664
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=98.88 E-value=7.4e-08 Score=95.27 Aligned_cols=209 Identities=11% Similarity=0.060 Sum_probs=143.3
Q ss_pred cEEEEEcCCCCCCCCcccceE--ecccccccEEEEEE-c-CCCCCEEEEEe------------------CCCeEEEEECC
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIM--DLHGHKRRVGYIEW-H-PTAENVVASAG------------------FDYLIILWDVG 207 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~--~~~~h~~~V~~~~~-~-p~~~~~l~s~s------------------~d~~v~iwd~~ 207 (494)
.|.+.|+.+. +... .+. .......+++ + |+++ +++.++ .++.+.+.|..
T Consensus 113 rVavIdl~t~-------~~~~ii~ip-~g~~phg~~~~~~p~~~-~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~ 183 (595)
T 1fwx_A 113 RVARVRCDVM-------KCDAILEIP-NAKGIHGLRPQKWPRSN-YVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDAD 183 (595)
T ss_dssp EEEEEETTTT-------EEEEEEECS-SCCSEEEEEECCSSBCS-EEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETT
T ss_pred EEEEEECCCc-------eEeeEEeCC-CCCCCcceeeeecCCCc-EEEEecccccccCCCCcccccccccCceEEEEECC
Confidence 4778888776 3333 332 2234678887 5 8884 565553 35689999999
Q ss_pred CCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCC--------------------------------------eEEEEeCC
Q psy14130 208 KGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDK--------------------------------------TVRVLDPR 249 (494)
Q Consensus 208 ~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~--------------------------------------~v~iwd~~ 249 (494)
+.+.+.++.--. ....++++|+|+++++++.+. .|.+.|.+
T Consensus 184 t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~ 262 (595)
T 1fwx_A 184 KWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGR 262 (595)
T ss_dssp TTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECS
T ss_pred CCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCc
Confidence 998888876322 456788999999999988553 47788888
Q ss_pred C--Cce-EEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCC---------ceeEeeecCCCceEEeE
Q psy14130 250 T--GLV-ISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNT---------PLALETVDSSSGVLFPY 317 (494)
Q Consensus 250 ~--~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~---------~~~~~~~~~~~~v~~~~ 317 (494)
+ ++. +..+..... ...+.++|++.++++++ ..+.+|.++|+.+... ...........+...++
T Consensus 263 ~~~~~~~~~~Ipvg~~--PhGv~~sPDGk~v~V~~---~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~a 337 (595)
T 1fwx_A 263 KEASSLFTRYIPIANN--PHGCNMAPDKKHLCVAG---KLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTA 337 (595)
T ss_dssp GGGCCSSEEEEEEESS--CCCEEECTTSSEEEEEC---TTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEE
T ss_pred ccCCceeEEEEecCCC--ceEEEEcCCCCEEEEeC---CCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEE
Confidence 7 554 555554433 57899999988899998 7899999999885321 01223344557889999
Q ss_pred EeCCCCEEEEEEeCCCcEEEEEeeC----------CCceEEecccccC--CCCeeEEEEecCCceeeec
Q psy14130 318 YDHDTRILFLAGKGDGNIRYYELTN----------ERPYIHFLNQSLS--GAPQRGLGFMPKRGCDVTQ 374 (494)
Q Consensus 318 ~~~~~~~l~~~g~~dg~i~~wd~~~----------~~~~~~~~~~~~~--~~~v~~~~~~p~~~~~~~~ 374 (494)
|+|+| .+|++.-.|+.|.+||+.. .+.+.+.-.++.. ...-.+++++|||.++++.
T Consensus 338 F~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~ 405 (595)
T 1fwx_A 338 FDGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCL 405 (595)
T ss_dssp ECTTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEE
T ss_pred ECCCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEc
Confidence 99999 8889999999999999987 2222222111110 0111334568999988875
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=98.88 E-value=2.6e-07 Score=85.89 Aligned_cols=201 Identities=14% Similarity=0.076 Sum_probs=126.0
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEec---C-CCCceEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVID---C-HPDVINC 224 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~---~-h~~~v~~ 224 (494)
+.|..|+. ++. ...+..+...+.+++++++| +++++...++.|.+||.. ++...... + ....+.+
T Consensus 67 ~~i~~~~~-~g~--------~~~~~~~~~~~~gl~~d~dG-~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~ 135 (305)
T 3dr2_A 67 RRVLGWRE-DGT--------VDVLLDATAFTNGNAVDAQQ-RLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPND 135 (305)
T ss_dssp TEEEEEET-TSC--------EEEEEESCSCEEEEEECTTS-CEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCC
T ss_pred CEEEEEeC-CCC--------EEEEeCCCCccceeeECCCC-CEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCC
Confidence 35888876 331 23344456778999999998 677666666899999986 55322221 1 1134678
Q ss_pred EEEcCCCCEEEE----EeC-------------CCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCC-
Q psy14130 225 LSFNRDGSRLVT----TCK-------------DKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHS- 286 (494)
Q Consensus 225 l~~~~~~~~l~s----~~~-------------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~- 286 (494)
++++++|++++| |.. .+.|..||..+++..... .... ...++|+|++..++++. ..
T Consensus 136 i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~-p~gl~~spdg~~lyv~~---~~~ 209 (305)
T 3dr2_A 136 LIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDH-PNGLAFSPDEQTLYVSQ---TPE 209 (305)
T ss_dssp EEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESS-EEEEEECTTSSEEEEEE---CCC
T ss_pred EEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCC-CcceEEcCCCCEEEEEe---cCC
Confidence 999999998886 332 356888888777744333 2222 67899999976677766 33
Q ss_pred ----CceEEEEeCCCCCCceeEeee-c-CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCee
Q psy14130 287 ----DRQVGLWDENDLNTPLALETV-D-SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQR 360 (494)
Q Consensus 287 ----d~~i~iwd~~~~~~~~~~~~~-~-~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~ 360 (494)
.+.|.+||+.... ....... . .......++++++|+.. ++. .+| |.+|+. .++.+..+. ....+.
T Consensus 210 ~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d~~G~lw-v~~-~~g-v~~~~~-~g~~~~~~~----~~~~~~ 280 (305)
T 3dr2_A 210 QGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVDRGGWLW-SSS-GTG-VCVFDS-DGQLLGHIP----TPGTAS 280 (305)
T ss_dssp ---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEECTTSCEE-ECC-SSE-EEEECT-TSCEEEEEE----CSSCCC
T ss_pred cCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEECCCCCEE-Eec-CCc-EEEECC-CCCEEEEEE----CCCcee
Confidence 2789999986432 1111111 1 12334568899999954 544 444 999997 454433322 123588
Q ss_pred EEEEecCCce-eeecc
Q psy14130 361 GLGFMPKRGC-DVTQC 375 (494)
Q Consensus 361 ~~~~~p~~~~-~~~~~ 375 (494)
+++|.|++.. .++..
T Consensus 281 ~~~f~~d~~~L~it~~ 296 (305)
T 3dr2_A 281 NCTFDQAQQRLFITGG 296 (305)
T ss_dssp EEEECTTSCEEEEEET
T ss_pred EEEEeCCCCEEEEEcC
Confidence 9999998754 34443
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=98.88 E-value=1.1e-06 Score=78.77 Aligned_cols=180 Identities=12% Similarity=0.036 Sum_probs=125.1
Q ss_pred CcEEEEEcCCCCCCCCcccceEecc-cccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLH-GHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSF 227 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~-~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~ 227 (494)
+.|.+.|+.+++. +..+. +.......+++. +..+.++.-.++.+.++|..+.+.+.++...... ...+
T Consensus 44 s~v~~iD~~tg~v-------~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~--g~gl 112 (266)
T 2iwa_A 44 SSVRQVALQTGKV-------ENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKD--GWGL 112 (266)
T ss_dssp CEEEEEETTTCCE-------EEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEEEEEECCSSS--CCEE
T ss_pred CEEEEEECCCCCE-------EEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEEEEEECCCCC--eEEE
Confidence 4799999999843 33322 111122345555 3356666677899999999999999888632111 2335
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCC----CCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCcee
Q psy14130 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPG----TRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLA 303 (494)
Q Consensus 228 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~ 303 (494)
++||+.++.+..+++|.++|+.+.+.+..+..... .....+.|. + +++++.. ..++.|.+.|..+++....
T Consensus 113 t~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-d-g~lyvn~---~~~~~V~vID~~tg~V~~~ 187 (266)
T 2iwa_A 113 ATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-N-GEVWANI---WQTDCIARISAKDGTLLGW 187 (266)
T ss_dssp EECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-T-TEEEEEE---TTSSEEEEEETTTCCEEEE
T ss_pred EECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-C-CEEEEec---CCCCeEEEEECCCCcEEEE
Confidence 55777777777889999999999998777763321 125677777 4 6888777 4678999999998665333
Q ss_pred Eeeec-----------CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCC
Q psy14130 304 LETVD-----------SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNER 344 (494)
Q Consensus 304 ~~~~~-----------~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~ 344 (494)
+.... .......++|+|+++.+|+++...+.+...++....
T Consensus 188 I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~~ 239 (266)
T 2iwa_A 188 ILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLVR 239 (266)
T ss_dssp EECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEECC
T ss_pred EECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEeccc
Confidence 32110 012457899999999999999999999999987653
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=98.87 E-value=6.5e-07 Score=79.33 Aligned_cols=194 Identities=10% Similarity=-0.012 Sum_probs=131.5
Q ss_pred EEEEEEcCCCCCEEEEEeCCC--eEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEe-CCCeEEEEeCCCCceEE
Q psy14130 179 VGYIEWHPTAENVVASAGFDY--LIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTC-KDKTVRVLDPRTGLVIS 255 (494)
Q Consensus 179 V~~~~~~p~~~~~l~s~s~d~--~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~-~d~~v~iwd~~~~~~~~ 255 (494)
...+.|+ ++ .++.+++.+| .|+++|+.+++.+..+... .........+++..|.... .++.+.+||..+.+.+.
T Consensus 45 tqGL~~~-~~-~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ 121 (262)
T 3nol_A 45 TEGFFYR-NG-YFYESTGLNGRSSIRKVDIESGKTLQQIELG-KRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVR 121 (262)
T ss_dssp EEEEEEE-TT-EEEEEEEETTEEEEEEECTTTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEE
T ss_pred cceEEEE-CC-EEEEECCCCCCceEEEEECCCCcEEEEEecC-CccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEE
Confidence 3788898 55 6888888776 8999999999988887643 3343333333455555555 58899999999999999
Q ss_pred EeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCC---CceEEeEEeCCCCEEEEEEeCC
Q psy14130 256 QGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSS---SGVLFPYYDHDTRILFLAGKGD 332 (494)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~g~~d 332 (494)
++..... -..++ ++++.++.+. .++.|.++|..+.+....+...... ..+..+.|. +| .|++..-.+
T Consensus 122 ti~~~~e--G~glt--~dg~~L~~Sd----Gs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G-~lyan~w~~ 191 (262)
T 3nol_A 122 SFNYDGE--GWGLT--HNDQYLIMSD----GTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DG-EIFANVWQT 191 (262)
T ss_dssp EEECSSC--CCCEE--ECSSCEEECC----SSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TT-EEEEEETTS
T ss_pred EEECCCC--ceEEe--cCCCEEEEEC----CCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CC-EEEEEEccC
Confidence 9876433 23444 4556666654 4788999999886654443332222 233446676 56 566877788
Q ss_pred CcEEEEEeeCCCceEEeccc-c--------cCCCCeeEEEEecCC-ceeeeccceeEEEEeeC
Q psy14130 333 GNIRYYELTNERPYIHFLNQ-S--------LSGAPQRGLGFMPKR-GCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 333 g~i~~wd~~~~~~~~~~~~~-~--------~~~~~v~~~~~~p~~-~~~~~~~~~~~~~~l~~ 385 (494)
+.|.+.|.++++....+-.. . .......+|||+|++ .+++++-.--++|.+.-
T Consensus 192 ~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~ev~~ 254 (262)
T 3nol_A 192 NKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPKVFEITL 254 (262)
T ss_dssp SEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred CeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCCceEEEEE
Confidence 89999999999875444221 1 112456999999964 56677776677776643
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=98.83 E-value=3.2e-06 Score=87.65 Aligned_cols=186 Identities=15% Similarity=0.122 Sum_probs=118.9
Q ss_pred EEEEcCCCCCEEEEEeCCCe-------------------EEEEECCCCeEEEEecC--CC-------CceEEEEEcCCCC
Q psy14130 181 YIEWHPTAENVVASAGFDYL-------------------IILWDVGKGEALTVIDC--HP-------DVINCLSFNRDGS 232 (494)
Q Consensus 181 ~~~~~p~~~~~l~s~s~d~~-------------------v~iwd~~~~~~~~~~~~--h~-------~~v~~l~~~~~~~ 232 (494)
.++++|+. .+++.++.++. |..+|..+|+.+..++. |. ..+.......+|+
T Consensus 239 ~~~~d~~~-~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~ 317 (689)
T 1yiq_A 239 SFAYDPEL-NLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGK 317 (689)
T ss_dssp CEEEETTT-TEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTE
T ss_pred ceeEcCCC-CEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCc
Confidence 57888887 58888887764 99999999999888764 22 1122222223565
Q ss_pred ---EEEEEeCCCeEEEEeCCCCceEEEeeecCC--------------------------------------CCceEEEEE
Q psy14130 233 ---RLVTTCKDKTVRVLDPRTGLVISQGVCHPG--------------------------------------TRSSKAVFI 271 (494)
Q Consensus 233 ---~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~--------------------------------------~~~~~~~~~ 271 (494)
.++.++.+|.++++|.++|+++........ .....+++.
T Consensus 318 ~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~d 397 (689)
T 1yiq_A 318 PRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYN 397 (689)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEE
T ss_pred EEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceEC
Confidence 788999999999999999998744321110 001236788
Q ss_pred CCCCeEEEEEec---------C--------------------------------CCCceEEEEeCCCCCCceeEeeecCC
Q psy14130 272 GDTGRIVTTGFS---------R--------------------------------HSDRQVGLWDENDLNTPLALETVDSS 310 (494)
Q Consensus 272 ~~~~~l~~~g~~---------~--------------------------------~~d~~i~iwd~~~~~~~~~~~~~~~~ 310 (494)
|+.+.+++.... . ..++.|..||+.+++..-... ..
T Consensus 398 p~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~---~~ 474 (689)
T 1yiq_A 398 PDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVP---YV 474 (689)
T ss_dssp TTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEE---ES
T ss_pred CCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEcc---CC
Confidence 886655544210 0 014789999998876433322 22
Q ss_pred CceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeee
Q psy14130 311 SGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVT 373 (494)
Q Consensus 311 ~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~ 373 (494)
.......+...+..+ +.|+.||.|+.||.++++.+.++... ......-++|..+|...+.
T Consensus 475 ~~~~~g~~~tagglv-f~gt~dg~l~a~D~~tG~~lw~~~~~--~~~~~~p~ty~~~G~qyv~ 534 (689)
T 1yiq_A 475 TIFNGGTLSTAGNLV-FEGSADGRVIAYAADTGEKLWEQPAA--SGVMAAPVTYSVDGEQYVT 534 (689)
T ss_dssp SSCCCCEEEETTTEE-EEECTTSEEEEEETTTCCEEEEEECS--SCCCSCCEEEEETTEEEEE
T ss_pred CCccCccceECCCEE-EEECCCCcEEEEECCCCccceeeeCC--CCcccCceEEEECCEEEEE
Confidence 223333455677777 66789999999999999987655322 1222234677788775544
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=98.82 E-value=1.5e-05 Score=72.29 Aligned_cols=212 Identities=6% Similarity=-0.093 Sum_probs=133.1
Q ss_pred CcEEEEEEc--CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecC
Q psy14130 140 GGAFLVLPI--HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDC 217 (494)
Q Consensus 140 ~g~~~~~~~--~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~ 217 (494)
++.+.+... +.|..++...... .............+++++++..++++-...+.|.++++........+..
T Consensus 47 ~~~ly~~d~~~~~I~~~~~~g~~~-------~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~ 119 (267)
T 1npe_A 47 DKVVYWTDISEPSIGRASLHGGEP-------TTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDT 119 (267)
T ss_dssp TTEEEEEETTTTEEEEEESSSCCC-------EEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS
T ss_pred CCEEEEEECCCCEEEEEecCCCCc-------EEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEEC
Confidence 344444443 3588888765421 1122222246789999997646666767778999999865432222332
Q ss_pred CCCceEEEEEcCCCCEEEEEeC---CCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEe
Q psy14130 218 HPDVINCLSFNRDGSRLVTTCK---DKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWD 294 (494)
Q Consensus 218 h~~~v~~l~~~~~~~~l~s~~~---d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd 294 (494)
.......++++|++..|+.+.. .+.|..+++.... ...+..........+++.++++.++++. ...+.|.++|
T Consensus 120 ~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d~~~~~lyv~d---~~~~~I~~~~ 195 (267)
T 1npe_A 120 GLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFDAFSSQLCWVD---AGTHRAECLN 195 (267)
T ss_dssp SCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEETTTTEEEEEE---TTTTEEEEEE
T ss_pred CCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEcCCCCEEEEEE---CCCCEEEEEe
Confidence 2356789999997666655553 3688888876433 2333211222378899999888898888 6788999999
Q ss_pred CCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCc
Q psy14130 295 ENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRG 369 (494)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ 369 (494)
+..... ... .........++. ++..||++....+.|..+|..+++....+... ......++++.|++.
T Consensus 196 ~~g~~~-~~~--~~~~~~P~gi~~--d~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g--~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 196 PAQPGR-RKV--LEGLQYPFAVTS--YGKNLYYTDWKTNSVIAMDLAISKEMDTFHPH--KQTRLYGITIALSQC 263 (267)
T ss_dssp TTEEEE-EEE--EECCCSEEEEEE--ETTEEEEEETTTTEEEEEETTTTEEEEEECCS--SCCCCCCEEEECSCC
T ss_pred cCCCce-EEE--ecCCCCceEEEE--eCCEEEEEECCCCeEEEEeCCCCCceEEEccc--cccccceeeecCccC
Confidence 875321 111 122233445554 46778788878899999999988764443211 112368899998865
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.81 E-value=7.3e-10 Score=106.25 Aligned_cols=146 Identities=10% Similarity=0.043 Sum_probs=81.5
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEE
Q psy14130 190 NVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAV 269 (494)
Q Consensus 190 ~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 269 (494)
..+++++.|+.|+.||..+|+.+..+.. +.+.+..+..++..+++++.|+.|+.||..+|+.+..+..+....+....
T Consensus 10 ~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp 87 (369)
T 2hz6_A 10 TLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASP 87 (369)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCS
T ss_pred CEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCc
Confidence 5899999999999999999999988875 55666666677888888889999999999999876665443211010000
Q ss_pred EECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEE
Q psy14130 270 FIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIH 348 (494)
Q Consensus 270 ~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~ 348 (494)
....++.+++ | +.++.|+.||.++++..-.... .. ...++|++..+ ++++.|+.|+.||.++++....
T Consensus 88 ~~~~~~~v~~-g---~~dg~v~a~D~~tG~~~w~~~~---~~---~~~~~p~~~~v-~~~~~dg~v~a~d~~tG~~~W~ 155 (369)
T 2hz6_A 88 CRSSDGILYM-G---KKQDIWYVIDLLTGEKQQTLSS---AF---ADSLSPSTSLL-YLGRTEYTITMYDTKTRELRWN 155 (369)
T ss_dssp CC-----CCC-C---EEEEEEEEECCC----------------------------E-EEEEEEEEEECCCSSSSSCCCE
T ss_pred eEecCCEEEE-E---eCCCEEEEEECCCCcEEEEecC---CC---cccccccCCEE-EEEecCCEEEEEECCCCCEEEe
Confidence 1112344444 4 3789999999998765333221 11 13456677777 6677899999999999986544
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=98.79 E-value=2.3e-06 Score=75.10 Aligned_cols=195 Identities=11% Similarity=-0.012 Sum_probs=130.5
Q ss_pred cEEEEEEcCCCCCEEEEEeCCC--eEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEE-EeCCCeEEEEeCCCCceE
Q psy14130 178 RVGYIEWHPTAENVVASAGFDY--LIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVT-TCKDKTVRVLDPRTGLVI 254 (494)
Q Consensus 178 ~V~~~~~~p~~~~~l~s~s~d~--~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s-~~~d~~v~iwd~~~~~~~ 254 (494)
-...+.|++ + .++.+.+.+| .|+.+|+.+++.+..+... ...........+..|.. .-.++.+.+||..+.+.+
T Consensus 22 ftqGL~~~~-~-~LyestG~~g~S~v~~vD~~tgkv~~~~~l~-~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~ 98 (243)
T 3mbr_X 22 FTEGLFYLR-G-HLYESTGETGRSSVRKVDLETGRILQRAEVP-PPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPR 98 (243)
T ss_dssp CEEEEEEET-T-EEEEEECCTTSCEEEEEETTTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEE
T ss_pred ccccEEEEC-C-EEEEECCCCCCceEEEEECCCCCEEEEEeCC-CCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEE
Confidence 356899987 3 6778877764 8999999999988887633 23333222223444444 446899999999999999
Q ss_pred EEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCC---CceEEeEEeCCCCEEEEEEeC
Q psy14130 255 SQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSS---SGVLFPYYDHDTRILFLAGKG 331 (494)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~g~~ 331 (494)
.++..... -..++ +++++++++- .++.|.++|..+.+....+...... ..++.+.|. +| .+|+....
T Consensus 99 ~ti~~~~~--Gwglt--~dg~~L~vSd----gs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G-~lyanvw~ 168 (243)
T 3mbr_X 99 ARFRYPGE--GWALT--SDDSHLYMSD----GTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NG-ELLANVWL 168 (243)
T ss_dssp EEEECSSC--CCEEE--ECSSCEEEEC----SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT-EEEEEETT
T ss_pred EEEeCCCC--ceEEe--eCCCEEEEEC----CCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CC-EEEEEECC
Confidence 99876433 34444 4556676665 5788999999887654444332222 234455555 45 46677767
Q ss_pred CCcEEEEEeeCCCceEEeccc-c---------cCCCCeeEEEEecC-CceeeeccceeEEEEeeC
Q psy14130 332 DGNIRYYELTNERPYIHFLNQ-S---------LSGAPQRGLGFMPK-RGCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 332 dg~i~~wd~~~~~~~~~~~~~-~---------~~~~~v~~~~~~p~-~~~~~~~~~~~~~~~l~~ 385 (494)
+..|.+.|.++++.+..+-.. . ....-..+||+.|+ ..+++++-.--++|.+.-
T Consensus 169 s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~~~v~~ 233 (243)
T 3mbr_X 169 TSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWPMLYEIRL 233 (243)
T ss_dssp TTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred CCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCCcEEEEEE
Confidence 889999999999875443211 1 12345699999996 456777766667776653
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=98.77 E-value=1.3e-06 Score=77.32 Aligned_cols=191 Identities=8% Similarity=-0.040 Sum_probs=130.1
Q ss_pred EEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEE--EEEcCCCCEEEEEeCCCeEEEEeCCCCceEEE
Q psy14130 179 VGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINC--LSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQ 256 (494)
Q Consensus 179 V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~--l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~ 256 (494)
...+.|+. + .++++.+.+|.|+++|+.+++.+..+ - ...... +++.. +++.+..-.++.+.+||..+.+.+.+
T Consensus 57 tqGL~~~~-~-~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-~~~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~t 131 (268)
T 3nok_A 57 TQGLVFHQ-G-HFFESTGHQGTLRQLSLESAQPVWME-R-LGNIFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQRERT 131 (268)
T ss_dssp EEEEEEET-T-EEEEEETTTTEEEECCSSCSSCSEEE-E-CTTCCEEEEEECS-SCEEEEESSSCEEEEEETTTTEEEEE
T ss_pred cceEEEEC-C-EEEEEcCCCCEEEEEECCCCcEEeEE-C-CCCcceeEEEEeC-CEEEEEEccCCEEEEEECCcCcEEEE
Confidence 46788874 3 78899999999999999999887776 2 233333 55543 34444455789999999999999999
Q ss_pred eeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCC---CceEEeEEeCCCCEEEEEEeCCC
Q psy14130 257 GVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSS---SGVLFPYYDHDTRILFLAGKGDG 333 (494)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~g~~dg 333 (494)
+..... -..++ +++++++.+. .++.|.++|..+.+....+...... ..++.+.|. +| .|++....+.
T Consensus 132 i~~~~e--GwGLt--~Dg~~L~vSd----Gs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG-~lyanvw~s~ 201 (268)
T 3nok_A 132 TRYSGE--GWGLC--YWNGKLVRSD----GGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NG-VIYANIWHSS 201 (268)
T ss_dssp EECSSC--CCCEE--EETTEEEEEC----SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT-EEEEEETTCS
T ss_pred EeCCCc--eeEEe--cCCCEEEEEC----CCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CC-EEEEEECCCC
Confidence 876433 34555 4456666655 5889999999887654444332222 234556676 66 5667777788
Q ss_pred cEEEEEeeCCCceEEeccc-c---------cCCCCeeEEEEecC-CceeeeccceeEEEEee
Q psy14130 334 NIRYYELTNERPYIHFLNQ-S---------LSGAPQRGLGFMPK-RGCDVTQCEIFRFFKLH 384 (494)
Q Consensus 334 ~i~~wd~~~~~~~~~~~~~-~---------~~~~~v~~~~~~p~-~~~~~~~~~~~~~~~l~ 384 (494)
.|.+.|.++++.+..+-.. . ....-..+||+.|+ ..+++++-.--++|.+.
T Consensus 202 ~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp~~~ev~ 263 (268)
T 3nok_A 202 DVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWPRLFEVR 263 (268)
T ss_dssp EEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCSEEEEEE
T ss_pred eEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCCCceEEEE
Confidence 9999999999865443221 1 12346799999996 45777776666666654
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=98.74 E-value=3e-05 Score=72.26 Aligned_cols=222 Identities=14% Similarity=-0.007 Sum_probs=138.5
Q ss_pred EcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCC----CeEEEEecCCCCce
Q psy14130 147 PIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGK----GEALTVIDCHPDVI 222 (494)
Q Consensus 147 ~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~----~~~~~~~~~h~~~v 222 (494)
..+.|+..++..... ...+. .-....+++|++.+..++++-...+.|..+++.. ......+...-...
T Consensus 8 ~~~~I~~i~~~~~~~-------~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p 79 (316)
T 1ijq_A 8 NRHEVRKMTLDRSEY-------TSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 79 (316)
T ss_dssp CBSSEEEEETTSCCC-------EEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCC
T ss_pred CCCeEEEEECCCcce-------Eehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCc
Confidence 334688889887632 22222 3455789999987645666767778999999875 22222233233456
Q ss_pred EEEEEcCCCCEE-EEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCC-ceEEEEeCCCCCC
Q psy14130 223 NCLSFNRDGSRL-VTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSD-RQVGLWDENDLNT 300 (494)
Q Consensus 223 ~~l~~~~~~~~l-~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d-~~i~iwd~~~~~~ 300 (494)
.++++++.+..| ++-...+.|.++|+..... ..+..........++..|.++.++.+. ... +.|...++... .
T Consensus 80 ~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~-~~~~~~~~~~P~~iavdp~~g~ly~~d---~~~~~~I~~~~~dG~-~ 154 (316)
T 1ijq_A 80 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR-KTLFRENGSKPRAIVVDPVHGFMYWTD---WGTPAKIKKGGLNGV-D 154 (316)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSSSE-EEEEECTTCCEEEEEEETTTTEEEEEE---CSSSCEEEEEETTSC-C
T ss_pred CEEEEeecCCeEEEEECCCCEEEEEeCCCCce-EEEEECCCCCcceEEeCCCCCEEEEEc---cCCCCeEEEEcCCCC-C
Confidence 889999755544 5556788999999875433 333222223378899999888888887 333 78888887642 2
Q ss_pred ceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccceeEE
Q psy14130 301 PLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRF 380 (494)
Q Consensus 301 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~ 380 (494)
...+. .........+++++++..||++-...+.|..+|+..... ..+...........++++.. +.+.++.-+.-+|
T Consensus 155 ~~~~~-~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~-~~~~~~~~~~~~P~giav~~-~~ly~~d~~~~~V 231 (316)
T 1ijq_A 155 IYSLV-TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAI 231 (316)
T ss_dssp EEEEE-CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECTTTTSSEEEEEEET-TEEEEEETTTTEE
T ss_pred eEEEE-ECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCce-EEEeecCCccCCcEEEEEEC-CEEEEEECCCCeE
Confidence 21111 123356778999999999989888888999999875432 23322111123457888864 5666665444444
Q ss_pred EEee
Q psy14130 381 FKLH 384 (494)
Q Consensus 381 ~~l~ 384 (494)
+.++
T Consensus 232 ~~~~ 235 (316)
T 1ijq_A 232 FSAN 235 (316)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 4444
|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.70 E-value=3.1e-05 Score=68.93 Aligned_cols=209 Identities=9% Similarity=0.111 Sum_probs=137.2
Q ss_pred ecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecC-CCCceEEEEEcCCCCEEEEEeCCCeEEEEeCC
Q psy14130 171 DLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDC-HPDVINCLSFNRDGSRLVTTCKDKTVRVLDPR 249 (494)
Q Consensus 171 ~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~-h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~ 249 (494)
.+.+-...+..++|+|++..+++....++.|...|+. ++.+..+.- -....-.|++.+++.++++.-.++.+.++++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 4555667799999999875566667788999999997 877777642 22567889999999877776678899999876
Q ss_pred CCce---EEEeee-----cCCCCceEEEEECCCCeEEEEEecCCCCc-eEEEEeCCCCCCceeEeee------cCCCceE
Q psy14130 250 TGLV---ISQGVC-----HPGTRSSKAVFIGDTGRIVTTGFSRHSDR-QVGLWDENDLNTPLALETV------DSSSGVL 314 (494)
Q Consensus 250 ~~~~---~~~~~~-----~~~~~~~~~~~~~~~~~l~~~g~~~~~d~-~i~iwd~~~~~~~~~~~~~------~~~~~v~ 314 (494)
.... +..... ........++|.+.+++++++. ..+. .|..|+-............ .....+.
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~---E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S 176 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFK---EKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVS 176 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEE---ESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCC
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEE---CcCCceEEEEcccccCCceeeecchhhccccccCCce
Confidence 5442 222221 1122257899999988888877 2333 4555551000111111100 1224567
Q ss_pred EeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEe-ccc-c----cCCCCeeEEEEecCCceeeeccceeEEEEeeC
Q psy14130 315 FPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHF-LNQ-S----LSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 315 ~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~-~~~-~----~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~~ 385 (494)
.++++|....+++.......+..+|... +....+ +.. . ..-....+|+|.|+|.+.+++.. -.+|++..
T Consensus 177 ~l~~dp~tg~lliLS~~s~~L~~~d~~g-~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~-n~~y~f~~ 251 (255)
T 3qqz_A 177 GAEFNQQKNTLLVLSHESRALQEVTLVG-EVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEP-NRFYRFTP 251 (255)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTC-CEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETT-TEEEEEEC
T ss_pred eEEEcCCCCeEEEEECCCCeEEEEcCCC-CEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCC-ceEEEEEe
Confidence 8999999999988888888899999664 432222 221 1 01136799999999998877543 37777765
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.70 E-value=3.2e-05 Score=73.14 Aligned_cols=224 Identities=9% Similarity=-0.040 Sum_probs=142.3
Q ss_pred EEEEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCce
Q psy14130 143 FLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVI 222 (494)
Q Consensus 143 ~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v 222 (494)
+++...+.|+..++... .....+. ....+..++|++....++++-...+.|..+++..+.....+.......
T Consensus 47 ll~~~~~~I~~i~~~g~-------~~~~~~~-~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p 118 (349)
T 3v64_C 47 LLFANRIDIRQVLPHRS-------EYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESP 118 (349)
T ss_dssp EEEECBSCEEEECTTSC-------CEEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCC
T ss_pred eEeecccceEEEeCCCC-------eeEEeec-CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCc
Confidence 33333446777776544 2212222 334578999998764566666677899999997665444343333456
Q ss_pred EEEEEcCCCC-EEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCC-ceEEEEeCCCCCC
Q psy14130 223 NCLSFNRDGS-RLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSD-RQVGLWDENDLNT 300 (494)
Q Consensus 223 ~~l~~~~~~~-~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d-~~i~iwd~~~~~~ 300 (494)
.++++++.+. ++++-...+.|.+.++..... ..+..........+++.|.++.++.+. ... +.|..+++.....
T Consensus 119 ~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~-~~l~~~~l~~P~~iavdp~~g~ly~td---~~~~~~I~r~~~dG~~~ 194 (349)
T 3v64_C 119 GGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR-KVLLWQSLEKPRAIALHPMEGTIYWTD---WGNTPRIEASSMDGSGR 194 (349)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECTTCSCEEEEEEETTTTEEEEEE---CSSSCEEEEEETTSCSC
T ss_pred cEEEEecCCCeEEEEcCCCCeEEEEcCCCCce-EEEEeCCCCCcceEEEecCcCeEEEec---cCCCCEEEEEeCCCCCc
Confidence 7899998554 445555678999999875443 223222223378899999888898887 455 8899998875322
Q ss_pred ceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccceeEE
Q psy14130 301 PLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRF 380 (494)
Q Consensus 301 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~ 380 (494)
..+. .........++++|++..||++-...+.|..+|+..... ..++... .....++++ ..+.+.++.-+.-+|
T Consensus 195 -~~~~-~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~-~~~~~~~--~~~P~giav-~~~~ly~td~~~~~V 268 (349)
T 3v64_C 195 -RIIA-DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR-KAVISQG--LPHPFAITV-FEDSLYWTDWHTKSI 268 (349)
T ss_dssp -EESC-CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSS--CSSEEEEEE-ETTEEEEEETTTTEE
T ss_pred -EEEE-ECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCce-EEEEeCC--CCCceEEEE-ECCEEEEecCCCCeE
Confidence 1111 122345778999999999989988889999999875433 2332211 234678888 455666665444555
Q ss_pred EEee
Q psy14130 381 FKLH 384 (494)
Q Consensus 381 ~~l~ 384 (494)
+.++
T Consensus 269 ~~~~ 272 (349)
T 3v64_C 269 NSAN 272 (349)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5554
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=98.68 E-value=7e-07 Score=88.36 Aligned_cols=196 Identities=8% Similarity=-0.036 Sum_probs=138.0
Q ss_pred CCCCCEEEEEeCCCeEEEEECCCCeEEEEecC-CCCceEEEEE-c-CCCCEEEEEe------------------CCCeEE
Q psy14130 186 PTAENVVASAGFDYLIILWDVGKGEALTVIDC-HPDVINCLSF-N-RDGSRLVTTC------------------KDKTVR 244 (494)
Q Consensus 186 p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~-h~~~v~~l~~-~-~~~~~l~s~~------------------~d~~v~ 244 (494)
++|..++++...+..|.+.|+.+.++...+.- ....+..+++ + |++.++++++ .++.+.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 46645556666677899999999998775542 2356888898 5 8999998885 246899
Q ss_pred EEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCC----------------------------------CceE
Q psy14130 245 VLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHS----------------------------------DRQV 290 (494)
Q Consensus 245 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~----------------------------------d~~i 290 (494)
+.|..+.+.+.++.-... ...+..++++++++++.++... -+.|
T Consensus 179 vID~~t~~v~~qI~Vgg~--pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V 256 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVSGN--LDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGV 256 (595)
T ss_dssp EEETTTTEEEEEEEESSC--CCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTE
T ss_pred EEECCCCeEEEEEEeCCC--ccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcE
Confidence 999999998888775332 5677889998888888743211 0247
Q ss_pred EEEeCCC--CCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCce--------EEecccccCCCCee
Q psy14130 291 GLWDEND--LNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPY--------IHFLNQSLSGAPQR 360 (494)
Q Consensus 291 ~iwd~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~--------~~~~~~~~~~~~v~ 360 (494)
.+.|.++ ..... ..+.......++.++|||+++++++..+..|.++|+.+.+.. .........+...+
T Consensus 257 ~VID~~~~~~~~~~--~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~ 334 (595)
T 1fwx_A 257 KVVDGRKEASSLFT--RYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPL 334 (595)
T ss_dssp EEEECSGGGCCSSE--EEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEE
T ss_pred EEEeCcccCCceeE--EEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcc
Confidence 7777765 22211 122223456678999999999999999999999999965310 01122334456789
Q ss_pred EEEEecCCceeeec--cceeEEEEeeC
Q psy14130 361 GLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 361 ~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
.++|+|+|...++. ++.+-.|++..
T Consensus 335 h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 335 HTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp EEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred eEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 99999999554553 88899999876
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.67 E-value=2.4e-05 Score=75.11 Aligned_cols=226 Identities=9% Similarity=-0.051 Sum_probs=143.7
Q ss_pred cEEEEEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCC
Q psy14130 141 GAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPD 220 (494)
Q Consensus 141 g~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~ 220 (494)
+.+++...+.|+..++.... ....+. ....+..++|++.+..++++-...+.|..+++..+.....+.....
T Consensus 88 ~~l~~~~~~~I~~i~~~~~~-------~~~~~~-~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~ 159 (386)
T 3v65_B 88 PVLLFANRIDIRQVLPHRSE-------YTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLE 159 (386)
T ss_dssp CEEEEECBSCEEEECTTSCC-------CEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCS
T ss_pred ceeEeecCccceeeccCCCc-------EEEEec-CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCC
Confidence 34444444568888776542 212222 3345789999987645666666778999999976654444443334
Q ss_pred ceEEEEEcCCCCE-EEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCC-ceEEEEeCCCC
Q psy14130 221 VINCLSFNRDGSR-LVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSD-RQVGLWDENDL 298 (494)
Q Consensus 221 ~v~~l~~~~~~~~-l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d-~~i~iwd~~~~ 298 (494)
....+++++.+.. +++-...+.|.+.++........+. ........++..|.++.++.+. ... +.|..+++...
T Consensus 160 ~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~-~~l~~P~giavdp~~g~ly~td---~~~~~~I~r~~~dG~ 235 (386)
T 3v65_B 160 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW-QSLEKPRAIALHPMEGTIYWTD---WGNTPRIEASSMDGS 235 (386)
T ss_dssp CCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEEC-SSCSCEEEEEEETTTTEEEEEE---CSSSCEEEEEETTSC
T ss_pred CccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeec-CCCCCCcEEEEEcCCCeEEEec---cCCCCEEEEEeCCCC
Confidence 5678999985554 4555567889999987544322222 2223378899999888888887 445 78999998753
Q ss_pred CCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeecccee
Q psy14130 299 NTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIF 378 (494)
Q Consensus 299 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~ 378 (494)
.. ..+. .........++++|++..||++-+..+.|..+|+..... ..++... .....++++ ..+.+.++.-+.-
T Consensus 236 ~~-~~~~-~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~-~~~~~~~--~~~P~giav-~~~~ly~td~~~~ 309 (386)
T 3v65_B 236 GR-RIIA-DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR-KAVISQG--LPHPFAITV-FEDSLYWTDWHTK 309 (386)
T ss_dssp SC-EEEE-CSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSC-EEEECSS--CSSEEEEEE-ETTEEEEEETTTT
T ss_pred Cc-EEEE-ECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCee-EEEEECC--CCCceEEEE-ECCEEEEeeCCCC
Confidence 32 2221 123345778999999999989988889999999875433 2332211 234678888 4455666654444
Q ss_pred EEEEee
Q psy14130 379 RFFKLH 384 (494)
Q Consensus 379 ~~~~l~ 384 (494)
+|+.++
T Consensus 310 ~V~~~~ 315 (386)
T 3v65_B 310 SINSAN 315 (386)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 555554
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=98.67 E-value=4.5e-06 Score=73.91 Aligned_cols=164 Identities=13% Similarity=0.142 Sum_probs=109.9
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccE--EEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRV--GYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSF 227 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V--~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~ 227 (494)
.|+.+|+.+++. +..+.-. ... -.++.. ++.+.+..-.++.+.++|..+.+.+.++..... =..++
T Consensus 66 ~v~~vD~~Tgkv-------~~~~~l~-~~~FgeGit~~--g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~e-G~glt- 133 (262)
T 3nol_A 66 SIRKVDIESGKT-------LQQIELG-KRYFGEGISDW--KDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGE-GWGLT- 133 (262)
T ss_dssp EEEEECTTTCCE-------EEEEECC-TTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTCCEEEEEECSSC-CCCEE-
T ss_pred eEEEEECCCCcE-------EEEEecC-CccceeEEEEe--CCEEEEEEeeCCEEEEEECccCcEEEEEECCCC-ceEEe-
Confidence 699999999944 3333221 122 234443 435666666789999999999999998874222 13344
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCC----CCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCcee
Q psy14130 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPG----TRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLA 303 (494)
Q Consensus 228 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~ 303 (494)
+|+..|+.+..+++|.++|+.+.+.+..+..... ..++.+.|. + +++++.. -.+..|.+.|.++++....
T Consensus 134 -~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~-G~lyan~---w~~~~I~vIDp~tG~V~~~ 207 (262)
T 3nol_A 134 -HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-D-GEIFANV---WQTNKIVRIDPETGKVTGI 207 (262)
T ss_dssp -ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-T-TEEEEEE---TTSSEEEEECTTTCBEEEE
T ss_pred -cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-C-CEEEEEE---ccCCeEEEEECCCCcEEEE
Confidence 4677777777788999999999998887754321 113456776 4 6888877 4678999999988664333
Q ss_pred Eeee----------cCCCceEEeEEeCCCCEEEEEEeC
Q psy14130 304 LETV----------DSSSGVLFPYYDHDTRILFLAGKG 331 (494)
Q Consensus 304 ~~~~----------~~~~~v~~~~~~~~~~~l~~~g~~ 331 (494)
+... ......+.++|+|+++.||++|..
T Consensus 208 Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 208 IDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp EECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred EECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 3211 111345779999999999999853
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=98.59 E-value=2.5e-06 Score=82.26 Aligned_cols=190 Identities=17% Similarity=0.087 Sum_probs=121.4
Q ss_pred CCCCCEEEEEeCC----CeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEe----------CCCeEEEEeCCCC
Q psy14130 186 PTAENVVASAGFD----YLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTC----------KDKTVRVLDPRTG 251 (494)
Q Consensus 186 p~~~~~l~s~s~d----~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~----------~d~~v~iwd~~~~ 251 (494)
+++..++++...+ +.|.++|+.+++.+.++..-..+ .++++|||++++.+. .++.|.++|..++
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 4443344444444 79999999999999988755555 899999999888776 4678999999999
Q ss_pred ceEEEeeec-C-----CCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEE
Q psy14130 252 LVISQGVCH-P-----GTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRIL 325 (494)
Q Consensus 252 ~~~~~~~~~-~-----~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 325 (494)
+.+.++... . +.....+.++|++.+++++.+ ..++.|.+.|+.+.+.... +..... ....|+++..
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~--~~~~~VsVID~~t~kvv~~---I~v~g~---~~~~p~g~~~ 231 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQF--SPAPAVGVVDLEGKTFDRM---LDVPDC---YHIFPASPTV 231 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEEC--SSSCEEEEEETTTTEEEEE---EECCSE---EEEEEEETTE
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEec--CCCCeEEEEECCCCeEEEE---EEcCCc---eeeccCCCcE
Confidence 988887643 0 122567899999888888762 1268899999987654222 222211 2345555555
Q ss_pred EEEEeCCCcEEEEEeeCCCceEEecccccC-CCC-eeEEEEecCCce--eeeccceeEEEEeeC
Q psy14130 326 FLAGKGDGNIRYYELTNERPYIHFLNQSLS-GAP-QRGLGFMPKRGC--DVTQCEIFRFFKLHT 385 (494)
Q Consensus 326 ~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~-~~~-v~~~~~~p~~~~--~~~~~~~~~~~~l~~ 385 (494)
|++.+.||.+.+.+..+++........+.. ..+ ...+.|.|++.. +++..+.+.+.++..
T Consensus 232 ~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~ 295 (426)
T 3c75_H 232 FYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTA 295 (426)
T ss_dssp EEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECS
T ss_pred EEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccC
Confidence 577778888888888555543211001110 111 123567777553 233355666666644
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
Probab=98.59 E-value=0.00012 Score=70.64 Aligned_cols=227 Identities=13% Similarity=0.007 Sum_probs=140.4
Q ss_pred EEEEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC----eEEEEecCC
Q psy14130 143 FLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKG----EALTVIDCH 218 (494)
Q Consensus 143 ~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~----~~~~~~~~h 218 (494)
+++...+.|+..++.... ... +......+..++|++....++++-...+.|..+++... .....+...
T Consensus 86 ll~~~~~~I~~i~l~~~~-------~~~-~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~ 157 (400)
T 3p5b_L 86 LFFTNRHEVRKMTLDRSE-------YTS-LIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD 157 (400)
T ss_dssp EEEEETTEEEEECTTSCS-------CEE-EECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSS
T ss_pred eEEeccceeEEEccCCcc-------eeE-eccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCC
Confidence 333444568888876552 212 22345668899999876456666666789999998652 223334434
Q ss_pred CCceEEEEEcCC-CCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCC
Q psy14130 219 PDVINCLSFNRD-GSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEND 297 (494)
Q Consensus 219 ~~~v~~l~~~~~-~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~ 297 (494)
......+++++. ++++++-...+.|.+.|+........+. ........++..|.++.|+.+-+ ...+.|...++..
T Consensus 158 ~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~-~~~~~P~~iavdp~~g~ly~td~--~~~~~I~~~~~dG 234 (400)
T 3p5b_L 158 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR-ENGSKPRAIVVDPVHGFMYWTDW--GTPAKIKKGGLNG 234 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEE-CSSCCEEEEEEETTTTEEEEEEC--SSSCCEEEEETTS
T ss_pred CCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEe-CCCCCcceEEEecccCeEEEEeC--CCCCEEEEEeCCC
Confidence 556789999984 4455555567899999988554333333 23233788999998788888872 2247899888875
Q ss_pred CCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccce
Q psy14130 298 LNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEI 377 (494)
Q Consensus 298 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~ 377 (494)
... ..+. .........+++++++..||++-...+.|..+|+..... ..+...........++++.. +.++++.-+.
T Consensus 235 ~~~-~~~~-~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~-~~~~~~~~~l~~P~gl~v~~-~~lywtd~~~ 310 (400)
T 3p5b_L 235 VDI-YSLV-TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVFE-DKVFWTDIIN 310 (400)
T ss_dssp CSC-EEEE-CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCC-EEEEECSSTTSSEEEEEEET-TEEEEEESSS
T ss_pred Ccc-EEEE-ECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCcc-EEEEeCCCCCCCCEEEEEeC-CEEEEecCCC
Confidence 332 2221 123356788999999999989888888999999876543 33332211123356777743 3555554333
Q ss_pred eEEEEee
Q psy14130 378 FRFFKLH 384 (494)
Q Consensus 378 ~~~~~l~ 384 (494)
-+|+.++
T Consensus 311 ~~V~~~~ 317 (400)
T 3p5b_L 311 EAIFSAN 317 (400)
T ss_dssp CSEEEEE
T ss_pred CeEEEEE
Confidence 3444443
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=98.59 E-value=2.5e-05 Score=68.57 Aligned_cols=165 Identities=13% Similarity=0.090 Sum_probs=110.1
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccc-cEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKR-RVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~-~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
.|+.+|+.+++. +....-... ---.+++. +..+.+..-.++.+.++|..+.+.+.++..... =..++
T Consensus 44 ~v~~vD~~tgkv-------~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~-Gwglt-- 111 (243)
T 3mbr_X 44 SVRKVDLETGRI-------LQRAEVPPPYFGAGIVAW--RDRLIQLTWRNHEGFVYDLATLTPRARFRYPGE-GWALT-- 111 (243)
T ss_dssp EEEEEETTTCCE-------EEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTTEEEEEEECSSC-CCEEE--
T ss_pred eEEEEECCCCCE-------EEEEeCCCCcceeEEEEe--CCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCC-ceEEe--
Confidence 699999999844 333221111 11234443 335666667789999999999999999874322 24555
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCC----CCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeE
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPG----TRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLAL 304 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~ 304 (494)
+++..|+.+..+++|.++|+.+.+.+.++..... ...+.+.|. ++++++.. -.+..|.+.|.++++....+
T Consensus 112 ~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~--~G~lyanv---w~s~~I~vIDp~tG~V~~~i 186 (243)
T 3mbr_X 112 SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV--NGELLANV---WLTSRIARIDPASGKVVAWI 186 (243)
T ss_dssp ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEE---TTTTEEEEECTTTCBEEEEE
T ss_pred eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe--CCEEEEEE---CCCCeEEEEECCCCCEEEEE
Confidence 4566677667789999999999998877754321 124556665 46788777 35778999999886643332
Q ss_pred eee-----------cCCCceEEeEEeCCCCEEEEEEeC
Q psy14130 305 ETV-----------DSSSGVLFPYYDHDTRILFLAGKG 331 (494)
Q Consensus 305 ~~~-----------~~~~~v~~~~~~~~~~~l~~~g~~ 331 (494)
... ....-.+.++|+|+++.||+||..
T Consensus 187 dl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 187 DLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp ECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT
T ss_pred ECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC
Confidence 211 111345779999999999999854
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=98.58 E-value=1.5e-05 Score=70.68 Aligned_cols=165 Identities=9% Similarity=-0.043 Sum_probs=112.2
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcC
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNR 229 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~ 229 (494)
+|+++|+.+++....+ +.. ...--.+++. +..+.+..-.++.+.++|..+.+.+.++.... .-..++ +
T Consensus 76 ~v~~iD~~Tgkv~~~~------l~~-~~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~-eGwGLt--~ 143 (268)
T 3nok_A 76 TLRQLSLESAQPVWME------RLG-NIFAEGLASD--GERLYQLTWTEGLLFTWSGMPPQRERTTRYSG-EGWGLC--Y 143 (268)
T ss_dssp EEEECCSSCSSCSEEE------ECT-TCCEEEEEEC--SSCEEEEESSSCEEEEEETTTTEEEEEEECSS-CCCCEE--E
T ss_pred EEEEEECCCCcEEeEE------CCC-CcceeEEEEe--CCEEEEEEccCCEEEEEECCcCcEEEEEeCCC-ceeEEe--c
Confidence 5999999998543211 221 1111235554 33677777788999999999999999887432 223444 4
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCC----CceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEe
Q psy14130 230 DGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGT----RSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALE 305 (494)
Q Consensus 230 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~ 305 (494)
|+..|+.+..+++|.++|+.+.+.+.++...... ..+.+.|. + +++++.. -.+..|.+.|.++++....+.
T Consensus 144 Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-d-G~lyanv---w~s~~I~vIDp~TG~V~~~Id 218 (268)
T 3nok_A 144 WNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-N-GVIYANI---WHSSDVLEIDPATGTVVGVID 218 (268)
T ss_dssp ETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-T-TEEEEEE---TTCSEEEEECTTTCBEEEEEE
T ss_pred CCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-C-CEEEEEE---CCCCeEEEEeCCCCcEEEEEE
Confidence 6788888778999999999999988877543221 14556676 4 6788777 467899999998866433322
Q ss_pred ee-----------cCCCceEEeEEeCCCCEEEEEEeC
Q psy14130 306 TV-----------DSSSGVLFPYYDHDTRILFLAGKG 331 (494)
Q Consensus 306 ~~-----------~~~~~v~~~~~~~~~~~l~~~g~~ 331 (494)
.. +...-.+.++|+|+++.||+||..
T Consensus 219 l~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~ 255 (268)
T 3nok_A 219 ASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKL 255 (268)
T ss_dssp CHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETT
T ss_pred CCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCC
Confidence 11 111345779999999999999853
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=98.56 E-value=8.7e-06 Score=84.23 Aligned_cols=187 Identities=14% Similarity=0.093 Sum_probs=121.5
Q ss_pred EEEEEcCCCCCEEEEEeCCC-------------------eEEEEECCCCeEEEEecC--CC-------CceEEEEEcCCC
Q psy14130 180 GYIEWHPTAENVVASAGFDY-------------------LIILWDVGKGEALTVIDC--HP-------DVINCLSFNRDG 231 (494)
Q Consensus 180 ~~~~~~p~~~~~l~s~s~d~-------------------~v~iwd~~~~~~~~~~~~--h~-------~~v~~l~~~~~~ 231 (494)
..++++|++ .+++.++.++ .|..+|..+|+.+..++. |. ....-+....+|
T Consensus 246 ~~~~~d~~~-~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG 324 (677)
T 1kb0_A 246 DSMTFDAEL-NTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAG 324 (677)
T ss_dssp SCEEEETTT-TEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETT
T ss_pred cceeEcCCC-CEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCC
Confidence 467888887 5777777664 599999999998887763 21 122223333467
Q ss_pred ---CEEEEEeCCCeEEEEeCCCCceEEEeeecCCC----------------------------------CceEEEEECCC
Q psy14130 232 ---SRLVTTCKDKTVRVLDPRTGLVISQGVCHPGT----------------------------------RSSKAVFIGDT 274 (494)
Q Consensus 232 ---~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~~ 274 (494)
..++.++.+|.+.++|.++|+.+......... ....++++|+.
T Consensus 325 ~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~ 404 (677)
T 1kb0_A 325 KPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQT 404 (677)
T ss_dssp EEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTT
T ss_pred cEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCC
Confidence 68999999999999999999987665422100 01246778886
Q ss_pred CeEEEEEec------------C---------------------------CCCceEEEEeCCCCCCceeEeeecCCCceEE
Q psy14130 275 GRIVTTGFS------------R---------------------------HSDRQVGLWDENDLNTPLALETVDSSSGVLF 315 (494)
Q Consensus 275 ~~l~~~g~~------------~---------------------------~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~ 315 (494)
+.+++.... . ...+.|..||+.+++..-... ....+..
T Consensus 405 ~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~---~~~~~~~ 481 (677)
T 1kb0_A 405 GLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVE---HVSPWNG 481 (677)
T ss_dssp TEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEE---ESSSCCC
T ss_pred CEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecC---CCCCCcC
Confidence 666554310 0 012789999998865433322 2233444
Q ss_pred eEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeee
Q psy14130 316 PYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVT 373 (494)
Q Consensus 316 ~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~ 373 (494)
..+..++..+ +.++.||.+++||.++++.+..+... ......-+.+.++|...+.
T Consensus 482 g~~~~~g~~v-~~g~~dg~l~a~D~~tG~~lw~~~~~--~~~~~~p~~y~~~G~~~v~ 536 (677)
T 1kb0_A 482 GTLTTAGNVV-FQGTADGRLVAYHAATGEKLWEAPTG--TGVVAAPSTYMVDGRQYVS 536 (677)
T ss_dssp CEEEETTTEE-EEECTTSEEEEEETTTCCEEEEEECS--SCCCSCCEEEEETTEEEEE
T ss_pred cceEeCCCEE-EEECCCCcEEEEECCCCceeeeeeCC--CCcccCCEEEEeCCEEEEE
Confidence 4566677777 55789999999999999987665332 1222344566777765443
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=98.53 E-value=6.2e-06 Score=85.52 Aligned_cols=184 Identities=9% Similarity=0.038 Sum_probs=116.4
Q ss_pred CCCeEEEEECCCCeEEEEecCCC-------------------------------CceEEEEEcCCCCEEEEEeCCCe---
Q psy14130 197 FDYLIILWDVGKGEALTVIDCHP-------------------------------DVINCLSFNRDGSRLVTTCKDKT--- 242 (494)
Q Consensus 197 ~d~~v~iwd~~~~~~~~~~~~h~-------------------------------~~v~~l~~~~~~~~l~s~~~d~~--- 242 (494)
.++.|+.||..+|+.+..+.... .....++++|++.+++.++.++.
T Consensus 181 ~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~ 260 (689)
T 1yiq_A 181 VRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWD 260 (689)
T ss_dssp CBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSC
T ss_pred CCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccc
Confidence 37899999999999887765210 01125788998889999888764
Q ss_pred ----------------EEEEeCCCCceEEEeee--cCC------CCceEEEEECCCC--eEEEEEecCCCCceEEEEeCC
Q psy14130 243 ----------------VRVLDPRTGLVISQGVC--HPG------TRSSKAVFIGDTG--RIVTTGFSRHSDRQVGLWDEN 296 (494)
Q Consensus 243 ----------------v~iwd~~~~~~~~~~~~--~~~------~~~~~~~~~~~~~--~l~~~g~~~~~d~~i~iwd~~ 296 (494)
|..+|.++|+.+-.+.. |.. ..........++. .+++.+ +.+|.++++|.+
T Consensus 261 ~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~---~~~G~l~~lD~~ 337 (689)
T 1yiq_A 261 PKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQA---PKNGFFYVIDRA 337 (689)
T ss_dssp HHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEEC---CTTSEEEEEETT
T ss_pred cCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEE---CCCCeEEEEECC
Confidence 99999999998877654 221 0011111111321 266667 789999999998
Q ss_pred CCCCceeEeeec-------------------------------------CCCceEEeEEeCCCCEEEEEEeC--------
Q psy14130 297 DLNTPLALETVD-------------------------------------SSSGVLFPYYDHDTRILFLAGKG-------- 331 (494)
Q Consensus 297 ~~~~~~~~~~~~-------------------------------------~~~~v~~~~~~~~~~~l~~~g~~-------- 331 (494)
+++......... .......++|+|+...+|+....
T Consensus 338 tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~ 417 (689)
T 1yiq_A 338 TGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHI 417 (689)
T ss_dssp TCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECC
T ss_pred CCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeec
Confidence 866431111000 00011237899999988664221
Q ss_pred ------------------------------------CCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeee--
Q psy14130 332 ------------------------------------DGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVT-- 373 (494)
Q Consensus 332 ------------------------------------dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~-- 373 (494)
+|.|+.||+.+++...+.-. ..+..+-.+...+.++..
T Consensus 418 ~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~----~~~~~~g~~~tagglvf~gt 493 (689)
T 1yiq_A 418 PEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPY----VTIFNGGTLSTAGNLVFEGS 493 (689)
T ss_dssp SSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEE----SSSCCCCEEEETTTEEEEEC
T ss_pred cccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccC----CCCccCccceECCCEEEEEC
Confidence 47899999999986544322 233444455555554443
Q ss_pred ccceeEEEEeeCCC
Q psy14130 374 QCEIFRFFKLHTTR 387 (494)
Q Consensus 374 ~~~~~~~~~l~~~~ 387 (494)
.|+.++.|+..+++
T Consensus 494 ~dg~l~a~D~~tG~ 507 (689)
T 1yiq_A 494 ADGRVIAYAADTGE 507 (689)
T ss_dssp TTSEEEEEETTTCC
T ss_pred CCCcEEEEECCCCc
Confidence 48899999988744
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=98.50 E-value=5.8e-05 Score=70.45 Aligned_cols=197 Identities=13% Similarity=0.005 Sum_probs=123.9
Q ss_pred cEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecC--------------------CCCceEEEEEcC-CCCEEEE
Q psy14130 178 RVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDC--------------------HPDVINCLSFNR-DGSRLVT 236 (494)
Q Consensus 178 ~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~--------------------h~~~v~~l~~~~-~~~~l~s 236 (494)
...+++|++++ ++++++..++.|..||..+++.. .+.. ....+.++++.+ +|+ |+.
T Consensus 20 ~p~~i~~d~~g-~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v 96 (322)
T 2fp8_A 20 APNSFTFDSTN-KGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYI 96 (322)
T ss_dssp CCCCEECCTTC-SSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEE
T ss_pred CceEEEEcCCC-CEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEE
Confidence 34578899987 67788888999999998765432 2210 013578999998 554 555
Q ss_pred EeCCCeEEEEeCCCCceEEEeee----cCCCCceEEEEEC-CCCeEEEEEecC--------------CCCceEEEEeCCC
Q psy14130 237 TCKDKTVRVLDPRTGLVISQGVC----HPGTRSSKAVFIG-DTGRIVTTGFSR--------------HSDRQVGLWDEND 297 (494)
Q Consensus 237 ~~~d~~v~iwd~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~l~~~g~~~--------------~~d~~i~iwd~~~ 297 (494)
+...+.|..+|..+++. ..+.. ........+++.+ + +.++++.... ..++.|..||..+
T Consensus 97 ~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~-G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~ 174 (322)
T 2fp8_A 97 VDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRT-GIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPST 174 (322)
T ss_dssp EETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTT-CCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTT
T ss_pred EECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCC-CEEEEECCcccccccccceehcccCCCceEEEEeCCC
Confidence 55556689999876542 22211 1112256788888 6 5666654110 1236788888765
Q ss_pred CCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCc-eEEecccccCCCCeeEEEEecCCceeeeccc
Q psy14130 298 LNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERP-YIHFLNQSLSGAPQRGLGFMPKRGCDVTQCE 376 (494)
Q Consensus 298 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~-~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~ 376 (494)
......... ......++++|+++.||++-...+.|..|++..... ........ .. ..++++.++|.+.++..+
T Consensus 175 ~~~~~~~~~---~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~--~g-P~gi~~d~~G~l~va~~~ 248 (322)
T 2fp8_A 175 KETTLLLKE---LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKI--PN-PGNIKRNADGHFWVSSSE 248 (322)
T ss_dssp TEEEEEEEE---ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEEC--SS-EEEEEECTTSCEEEEEEE
T ss_pred CEEEEeccC---CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeC--CC-CCCeEECCCCCEEEEecC
Confidence 432111111 133456899999998888877888999999875321 01111121 23 788999999987777644
Q ss_pred ----------eeEEEEeeC
Q psy14130 377 ----------IFRFFKLHT 385 (494)
Q Consensus 377 ----------~~~~~~l~~ 385 (494)
..+++.+..
T Consensus 249 ~~~~~~~~~~~~~v~~~d~ 267 (322)
T 2fp8_A 249 ELDGNMHGRVDPKGIKFDE 267 (322)
T ss_dssp ETTSSTTSCEEEEEEEECT
T ss_pred cccccccCCCccEEEEECC
Confidence 466777766
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=98.47 E-value=0.00029 Score=67.22 Aligned_cols=179 Identities=7% Similarity=-0.044 Sum_probs=107.6
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEEecCCCCce-----EEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCC-
Q psy14130 190 NVVASAGFDYLIILWDVGKGEALTVIDCHPDVI-----NCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGT- 263 (494)
Q Consensus 190 ~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v-----~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~- 263 (494)
..++.++.++.|..+|..+|+.+.......... ...... +..++.++.++.|..+|..+|+.+.........
T Consensus 144 ~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~ 221 (376)
T 3q7m_A 144 GLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATG 221 (376)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC---
T ss_pred CEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCC
Confidence 377788889999999999999887776432211 122222 456788888999999999999987666533210
Q ss_pred ---------CceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCc
Q psy14130 264 ---------RSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGN 334 (494)
Q Consensus 264 ---------~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~ 334 (494)
........ ++.+++.+ .++.+..+|.++++..-.. . ......+.. ++..+ ..++.++.
T Consensus 222 ~~~~~~~~~~~~~p~~~--~~~v~~~~----~~g~l~~~d~~tG~~~w~~---~-~~~~~~~~~--~~~~l-~~~~~~g~ 288 (376)
T 3q7m_A 222 STEIDRLSDVDTTPVVV--NGVVFALA----YNGNLTALDLRSGQIMWKR---E-LGSVNDFIV--DGNRI-YLVDQNDR 288 (376)
T ss_dssp --------CCCCCCEEE--TTEEEEEC----TTSCEEEEETTTCCEEEEE---C-CCCEEEEEE--ETTEE-EEEETTCC
T ss_pred CcccccccccCCCcEEE--CCEEEEEe----cCcEEEEEECCCCcEEeec---c-CCCCCCceE--ECCEE-EEEcCCCe
Confidence 00111111 35555554 6889999999876543221 1 123334444 35566 44567899
Q ss_pred EEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccceeEEEEeeC
Q psy14130 335 IRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 335 i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~~ 385 (494)
|..+|..+++....... . ............+..++.+.++.+..++..+
T Consensus 289 l~~~d~~tG~~~w~~~~-~-~~~~~~~~~~~~~~l~v~~~~g~l~~~d~~t 337 (376)
T 3q7m_A 289 VMALTIDGGVTLWTQSD-L-LHRLLTSPVLYNGNLVVGDSEGYLHWINVED 337 (376)
T ss_dssp EEEEETTTCCEEEEECT-T-TTSCCCCCEEETTEEEEECTTSEEEEEETTT
T ss_pred EEEEECCCCcEEEeecc-c-CCCcccCCEEECCEEEEEeCCCeEEEEECCC
Confidence 99999999986544321 1 1122233333333223333467788888766
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=98.43 E-value=4.9e-05 Score=70.41 Aligned_cols=197 Identities=9% Similarity=-0.008 Sum_probs=120.5
Q ss_pred ccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCC--CeEEEEeCCCCceE
Q psy14130 177 RRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKD--KTVRVLDPRTGLVI 254 (494)
Q Consensus 177 ~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d--~~v~iwd~~~~~~~ 254 (494)
.....++|++++ +++++-..++.|..||.... ....+. ....+.+++++++|+++++.... ..|..+|..+++..
T Consensus 32 ~~pegia~~~~g-~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~ 108 (306)
T 2p4o_A 32 TFLENLASAPDG-TIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVE 108 (306)
T ss_dssp CCEEEEEECTTS-CEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEE
T ss_pred CCcceEEECCCC-CEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEE
Confidence 446789999988 67777778899999998654 333333 34578999999999976665443 25777888888754
Q ss_pred EEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeE-e------e-ecCCCceEEeEEeCCCCEEE
Q psy14130 255 SQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLAL-E------T-VDSSSGVLFPYYDHDTRILF 326 (494)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~-~------~-~~~~~~v~~~~~~~~~~~l~ 326 (494)
.............++.. .++.++++. ..++.|.++|.......... . . .........+ +|+++.||
T Consensus 109 ~~~~~~~~~~~~g~~~~-~~~~~~v~d---~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~ly 182 (306)
T 2p4o_A 109 TLLTLPDAIFLNGITPL-SDTQYLTAD---SYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLY 182 (306)
T ss_dssp EEEECTTCSCEEEEEES-SSSEEEEEE---TTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEE
T ss_pred EEEeCCCccccCccccc-CCCcEEEEE---CCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEE
Confidence 32222112212334433 346667766 46888999997642110100 0 0 0111223344 88999998
Q ss_pred EEEeCCCcEEEEEeeC-CCce-EEecccccCCCCeeEEEEecCCceeeeccceeEEEEeeC
Q psy14130 327 LAGKGDGNIRYYELTN-ERPY-IHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 327 ~~g~~dg~i~~wd~~~-~~~~-~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~~ 385 (494)
++-...+.|..|++.. ++.- ...... .....++++.++|.+.++.-+.-+|..+..
T Consensus 183 v~d~~~~~I~~~~~~~~g~~~~~~~~~~---~~~P~gi~vd~dG~l~va~~~~~~V~~~~~ 240 (306)
T 2p4o_A 183 VSNTEKMLLLRIPVDSTDKPGEPEIFVE---QTNIDDFAFDVEGNLYGATHIYNSVVRIAP 240 (306)
T ss_dssp EEETTTTEEEEEEBCTTSCBCCCEEEEE---SCCCSSEEEBTTCCEEEECBTTCCEEEECT
T ss_pred EEeCCCCEEEEEEeCCCCCCCccEEEec---cCCCCCeEECCCCCEEEEeCCCCeEEEECC
Confidence 9988899999999975 3210 111111 134688999999988877633333443443
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=98.43 E-value=9.1e-06 Score=84.10 Aligned_cols=183 Identities=13% Similarity=0.075 Sum_probs=119.0
Q ss_pred CCeEEEEECCCCeEEEEecCCCCc--------------------------------eEEEEEcCCCCEEEEEeCCC----
Q psy14130 198 DYLIILWDVGKGEALTVIDCHPDV--------------------------------INCLSFNRDGSRLVTTCKDK---- 241 (494)
Q Consensus 198 d~~v~iwd~~~~~~~~~~~~h~~~--------------------------------v~~l~~~~~~~~l~s~~~d~---- 241 (494)
++.|+.+|..+|+.+..+...... ...+++++++.+++.++.++
T Consensus 189 ~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~ 268 (677)
T 1kb0_A 189 RGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWS 268 (677)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSC
T ss_pred CCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCcccc
Confidence 799999999999998877532211 13578899888998887664
Q ss_pred ---------------eEEEEeCCCCceEEEeeecCC--------CCceEEEEECCCC--eEEEEEecCCCCceEEEEeCC
Q psy14130 242 ---------------TVRVLDPRTGLVISQGVCHPG--------TRSSKAVFIGDTG--RIVTTGFSRHSDRQVGLWDEN 296 (494)
Q Consensus 242 ---------------~v~iwd~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~--~l~~~g~~~~~d~~i~iwd~~ 296 (494)
.|..+|.++|+.+..+..... .....+....++. .+++.+ +.+|.|+++|.+
T Consensus 269 ~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~---~~~G~l~~lD~~ 345 (677)
T 1kb0_A 269 HKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHA---PKNGFFFVLDRT 345 (677)
T ss_dssp HHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEEC---CTTSEEEEEETT
T ss_pred CCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEE---CCCCEEEEEECC
Confidence 599999999998877654211 1112222222432 567777 789999999998
Q ss_pred CCCCceeEeeec--------CC-------------------------CceEEeEEeCCCCEEEEEEe-------------
Q psy14130 297 DLNTPLALETVD--------SS-------------------------SGVLFPYYDHDTRILFLAGK------------- 330 (494)
Q Consensus 297 ~~~~~~~~~~~~--------~~-------------------------~~v~~~~~~~~~~~l~~~g~------------- 330 (494)
+++......... .. .....++|+|++..+|+...
T Consensus 346 tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~ 425 (677)
T 1kb0_A 346 NGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWE 425 (677)
T ss_dssp TCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCC
T ss_pred CCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccc
Confidence 876432221100 00 00125789999999866432
Q ss_pred -----------------------------CCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeee--ccceeE
Q psy14130 331 -----------------------------GDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVT--QCEIFR 379 (494)
Q Consensus 331 -----------------------------~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~--~~~~~~ 379 (494)
..|.|..||+.+++...+.. ...++.+..+..++.+++. .++.++
T Consensus 426 ~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~----~~~~~~~g~~~~~g~~v~~g~~dg~l~ 501 (677)
T 1kb0_A 426 FNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVE----HVSPWNGGTLTTAGNVVFQGTADGRLV 501 (677)
T ss_dssp TTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEE----ESSSCCCCEEEETTTEEEEECTTSEEE
T ss_pred cccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecC----CCCCCcCcceEeCCCEEEEECCCCcEE
Confidence 12789999999998654432 2344556666666554443 488899
Q ss_pred EEEeeCCC
Q psy14130 380 FFKLHTTR 387 (494)
Q Consensus 380 ~~~l~~~~ 387 (494)
+|++.+++
T Consensus 502 a~D~~tG~ 509 (677)
T 1kb0_A 502 AYHAATGE 509 (677)
T ss_dssp EEETTTCC
T ss_pred EEECCCCc
Confidence 99987743
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=98.43 E-value=1.8e-05 Score=74.02 Aligned_cols=207 Identities=11% Similarity=-0.006 Sum_probs=127.8
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.|..+|.. + +.......+...+.++...+++ . +..++.++.|..+|.. ++.+..+......+.++...
T Consensus 117 ~~l~~~d~~-g-------~~~~~~~~~~~~~~~~~~~~~g-~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d 185 (330)
T 3hxj_A 117 GHLYAINTD-G-------TEKWRFKTKKAIYATPIVSEDG-T-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIG 185 (330)
T ss_dssp SEEEEECTT-S-------CEEEEEECSSCCCSCCEECTTS-C-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEEC
T ss_pred CEEEEEcCC-C-------CEEEEEcCCCceeeeeEEcCCC-E-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEc
Confidence 457777765 4 2222222334445666777776 3 6667788999999998 87777776566677888888
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD 308 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~ 308 (494)
+++.+++.+ +.|..+| .+++.+......... +..+...++ +.++++. .++.|..+|.. ........ .
T Consensus 186 ~~g~l~v~t---~~l~~~d-~~g~~~~~~~~~~~~-~~~~~~~~~-g~l~v~t----~~~gl~~~~~~-g~~~~~~~--~ 252 (330)
T 3hxj_A 186 KDGTIYFGS---DKVYAIN-PDGTEKWNFYAGYWT-VTRPAISED-GTIYVTS----LDGHLYAINPD-GTEKWRFK--T 252 (330)
T ss_dssp TTCCEEEES---SSEEEEC-TTSCEEEEECCSSCC-CSCCEECTT-SCEEEEE----TTTEEEEECTT-SCEEEEEE--C
T ss_pred CCCEEEEEe---CEEEEEC-CCCcEEEEEccCCcc-eeceEECCC-CeEEEEc----CCCeEEEECCC-CCEeEEee--C
Confidence 888755544 7899999 777766666544433 566666655 5666665 57788888743 22221111 1
Q ss_pred CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec-cceeEEEEeeC
Q psy14130 309 SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ-CEIFRFFKLHT 385 (494)
Q Consensus 309 ~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~-~~~~~~~~l~~ 385 (494)
....+..+..++++... .++.+|.|..+|. +++...... .....+.++...+++.+.+.. ++.+++.....
T Consensus 253 ~~~~~~~~~~~~~g~l~--v~t~~ggl~~~d~-~g~~~~~~~---~~~~~~~~~~~d~~g~l~~gt~~G~~~~~~~~~ 324 (330)
T 3hxj_A 253 GKRIESSPVIGNTDTIY--FGSYDGHLYAINP-DGTEKWNFE---TGSWIIATPVIDENGTIYFGTRNGKFYALFNLE 324 (330)
T ss_dssp SSCCCSCCEECTTSCEE--EECTTCEEEEECT-TSCEEEEEE---CSSCCCSCCEECTTCCEEEECTTSCEEEEEC--
T ss_pred CCCccccceEcCCCeEE--EecCCCCEEEECC-CCcEEEEEE---cCCccccceEEcCCCEEEEEcCCCeEEEEeccc
Confidence 22223345666666544 4567888999985 565433321 123456777777777766554 77777766544
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=98.36 E-value=0.00026 Score=73.15 Aligned_cols=166 Identities=15% Similarity=0.133 Sum_probs=107.0
Q ss_pred EEEEEcCCCCCEEEEEeCCC-------------------eEEEEECCCCeEEEEecC--CC-------CceEEEEEcCCC
Q psy14130 180 GYIEWHPTAENVVASAGFDY-------------------LIILWDVGKGEALTVIDC--HP-------DVINCLSFNRDG 231 (494)
Q Consensus 180 ~~~~~~p~~~~~l~s~s~d~-------------------~v~iwd~~~~~~~~~~~~--h~-------~~v~~l~~~~~~ 231 (494)
..+++.|.. .+++.++.++ .|..+|..+|+.+..++. |. .+.....+..+|
T Consensus 233 ~~~a~d~~~-~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G 311 (668)
T 1kv9_A 233 DSMAYDPEL-DLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDG 311 (668)
T ss_dssp SCEEEETTT-TEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETT
T ss_pred cceEEcCCC-CEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCC
Confidence 357888876 5788887766 499999999999888764 32 222222333366
Q ss_pred C---EEEEEeCCCeEEEEeCCCCceEEEeeecCCC-----------------------------------CceEEEEECC
Q psy14130 232 S---RLVTTCKDKTVRVLDPRTGLVISQGVCHPGT-----------------------------------RSSKAVFIGD 273 (494)
Q Consensus 232 ~---~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~-----------------------------------~~~~~~~~~~ 273 (494)
+ .++.++.+|.+.++|.++|+.+......... ....+++.|+
T Consensus 312 ~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~ 391 (668)
T 1kv9_A 312 KPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPG 391 (668)
T ss_dssp EEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETT
T ss_pred cEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCC
Confidence 5 6889999999999999999987443322100 0112567777
Q ss_pred CCeEEEEEe--------------------------------cCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCC
Q psy14130 274 TGRIVTTGF--------------------------------SRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHD 321 (494)
Q Consensus 274 ~~~l~~~g~--------------------------------~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 321 (494)
.+.+++... ....++.|.-||+.+++..-.... ............
T Consensus 392 ~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~---~~~~~~~~~~t~ 468 (668)
T 1kv9_A 392 TGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPY---PTHWNGGTLSTA 468 (668)
T ss_dssp TTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEE---SSSCCCCEEEET
T ss_pred CCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccC---CCCCcCceeEeC
Confidence 565554210 001348899999988654333322 222233334456
Q ss_pred CCEEEEEEeCCCcEEEEEeeCCCceEEec
Q psy14130 322 TRILFLAGKGDGNIRYYELTNERPYIHFL 350 (494)
Q Consensus 322 ~~~l~~~g~~dg~i~~wd~~~~~~~~~~~ 350 (494)
+..+ +.|+.||.++.||.++++.+.++.
T Consensus 469 gg~v-f~g~~dg~l~a~d~~tG~~l~~~~ 496 (668)
T 1kv9_A 469 GNLV-FQGTAAGQMHAYSADKGEALWQFE 496 (668)
T ss_dssp TTEE-EEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCEE-EEECCcccchhhhhhcChhheEec
Confidence 7777 557899999999999999866553
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=98.36 E-value=0.0013 Score=61.09 Aligned_cols=166 Identities=8% Similarity=-0.116 Sum_probs=111.2
Q ss_pred ccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCC--CeEEEEeCCCCceE
Q psy14130 177 RRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKD--KTVRVLDPRTGLVI 254 (494)
Q Consensus 177 ~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d--~~v~iwd~~~~~~~ 254 (494)
.....+++.+.+.+++++-...+.|.+.|+........+.........++++|.+..|+.+... +.|...++. |+..
T Consensus 77 ~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~ 155 (316)
T 1ijq_A 77 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDI 155 (316)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCE
T ss_pred CCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCe
Confidence 3457889987654666776778899999987544333344344678899999966666555543 688888886 4433
Q ss_pred EEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee-cCCCceEEeEEeCCCCEEEEEEeCCC
Q psy14130 255 SQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV-DSSSGVLFPYYDHDTRILFLAGKGDG 333 (494)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~g~~dg 333 (494)
..+....-.....+++.+++++++.+- ...+.|..+|+..... ..+... ........+++. +..||++-...+
T Consensus 156 ~~~~~~~~~~P~gla~d~~~~~lY~~D---~~~~~I~~~d~dg~~~-~~~~~~~~~~~~P~giav~--~~~ly~~d~~~~ 229 (316)
T 1ijq_A 156 YSLVTENIQWPNGITLDLLSGRLYWVD---SKLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVF--EDKVFWTDIINE 229 (316)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEE---TTTTEEEEEETTSCSC-EEEEECTTTTSSEEEEEEE--TTEEEEEETTTT
T ss_pred EEEEECCCCCceEEEEeccCCEEEEEE---CCCCeEEEEecCCCce-EEEeecCCccCCcEEEEEE--CCEEEEEECCCC
Confidence 333222223378999999888999888 6788999999875322 222221 122345566674 467778888889
Q ss_pred cEEEEEeeCCCceEEe
Q psy14130 334 NIRYYELTNERPYIHF 349 (494)
Q Consensus 334 ~i~~wd~~~~~~~~~~ 349 (494)
.|..++..+++....+
T Consensus 230 ~V~~~~~~~g~~~~~i 245 (316)
T 1ijq_A 230 AIFSANRLTGSDVNLL 245 (316)
T ss_dssp EEEEEETTTCCCCEEE
T ss_pred eEEEEeCCCCcceEEE
Confidence 9999998777654444
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=98.35 E-value=0.00015 Score=69.19 Aligned_cols=180 Identities=11% Similarity=0.008 Sum_probs=108.4
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCC----c
Q psy14130 190 NVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTR----S 265 (494)
Q Consensus 190 ~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~----~ 265 (494)
..++.++.++.|..+|..+|+.+................ +..++.++.++.|..+|.++|+.+.......... .
T Consensus 104 ~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~ 181 (376)
T 3q7m_A 104 GHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGE 181 (376)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCC
T ss_pred CEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCC
Confidence 467778889999999999999887776443222222222 4578888899999999999999877765433210 0
Q ss_pred eEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCC-----c---e-EEeEEeCCCCEEEEEEeCCCcEE
Q psy14130 266 SKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSS-----G---V-LFPYYDHDTRILFLAGKGDGNIR 336 (494)
Q Consensus 266 ~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~-----~---v-~~~~~~~~~~~l~~~g~~dg~i~ 336 (494)
...... ++.+++ | ..++.|..+|..+++..-......... . + ..+.. .+..+ ..++.++.+.
T Consensus 182 ~~~~~~--~~~v~~-g---~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~v-~~~~~~g~l~ 252 (376)
T 3q7m_A 182 SAPTTA--FGAAVV-G---GDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVV--VNGVV-FALAYNGNLT 252 (376)
T ss_dssp CCCEEE--TTEEEE-C---CTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEE--ETTEE-EEECTTSCEE
T ss_pred CCcEEE--CCEEEE-E---cCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEE--ECCEE-EEEecCcEEE
Confidence 122222 244444 4 478999999998765432222110000 0 1 11122 24556 4556889999
Q ss_pred EEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccceeEEEEeeC
Q psy14130 337 YYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 337 ~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~~ 385 (494)
.+|..+++...... .....++....+..++.+.++.+..++..+
T Consensus 253 ~~d~~tG~~~w~~~-----~~~~~~~~~~~~~l~~~~~~g~l~~~d~~t 296 (376)
T 3q7m_A 253 ALDLRSGQIMWKRE-----LGSVNDFIVDGNRIYLVDQNDRVMALTIDG 296 (376)
T ss_dssp EEETTTCCEEEEEC-----CCCEEEEEEETTEEEEEETTCCEEEEETTT
T ss_pred EEECCCCcEEeecc-----CCCCCCceEECCEEEEEcCCCeEEEEECCC
Confidence 99999998654432 122445555433334444577788887766
|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
Probab=98.34 E-value=0.00059 Score=63.37 Aligned_cols=221 Identities=10% Similarity=-0.053 Sum_probs=137.0
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeE-EEEecCCCCceEEEE
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEA-LTVIDCHPDVINCLS 226 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~-~~~~~~h~~~v~~l~ 226 (494)
.+.|+..++..... +....+. ....+.+++|++....++.+-...+.|..+++..+.. ...+...-....+++
T Consensus 12 ~~~I~~i~l~~~~~-----~~~~~~~-~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~gla 85 (318)
T 3sov_A 12 RRDLRLVDATNGKE-----NATIVVG-GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLA 85 (318)
T ss_dssp EEEEEEEETTCTTS-----CCEEEEE-EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEE
T ss_pred cCeEEEEECCCCce-----EEEEEec-CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEE
Confidence 34688899876531 1111111 2345678999986546667767778999999876532 122222234567899
Q ss_pred EcCCC-CEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEe
Q psy14130 227 FNRDG-SRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALE 305 (494)
Q Consensus 227 ~~~~~-~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~ 305 (494)
+.+.+ .++++-...+.|.++++.... ...+..........++..|.++.++.+.. ...+.|...++..... ..+.
T Consensus 86 vd~~~g~ly~~d~~~~~I~~~~~dG~~-~~~l~~~~~~~P~giavdp~~g~ly~td~--~~~~~I~r~~~dG~~~-~~~~ 161 (318)
T 3sov_A 86 CDWLGEKLYWTDSETNRIEVSNLDGSL-RKVLFWQELDQPRAIALDPSSGFMYWTDW--GEVPKIERAGMDGSSR-FIII 161 (318)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSSCSSEEEEEEEGGGTEEEEEEC--SSSCEEEEEETTSCSC-EEEE
T ss_pred EEcCCCeEEEEECCCCEEEEEECCCCc-EEEEEeCCCCCccEEEEeCCCCEEEEEec--CCCCEEEEEEcCCCCe-EEEE
Confidence 99754 455555567899999987543 23332223333788999988788888762 1357888888764322 2221
Q ss_pred eecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEe
Q psy14130 306 TVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKL 383 (494)
Q Consensus 306 ~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l 383 (494)
.........++++|++..||++-+..+.|..+|+..... ..+... ......++++..+ .++++. .+.+..++.
T Consensus 162 -~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~-~~~~~~--~~~~P~glav~~~-~lywtd~~~~~V~~~~~ 236 (318)
T 3sov_A 162 -NSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNR-QAVVKG--SLPHPFALTLFED-ILYWTDWSTHSILACNK 236 (318)
T ss_dssp -CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECS--CCSCEEEEEEETT-EEEEEETTTTEEEEEET
T ss_pred -ECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCce-EEEecC--CCCCceEEEEeCC-EEEEEecCCCeEEEEEC
Confidence 122345678999999999989988889999999875433 233321 1234678888644 455554 344444444
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.34 E-value=0.00062 Score=71.13 Aligned_cols=228 Identities=14% Similarity=0.021 Sum_probs=142.4
Q ss_pred EEEEEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC----eEEEEecC
Q psy14130 142 AFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKG----EALTVIDC 217 (494)
Q Consensus 142 ~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~----~~~~~~~~ 217 (494)
.+++.....|+..++.... .. .+......+..|+|++....++++-...+.|+.+++... .....+..
T Consensus 397 ~Ll~an~~~Ir~i~l~~~~-------~~-~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~ 468 (791)
T 3m0c_C 397 YLFFTNRHEVRKMTLDRSE-------YT-SLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR 468 (791)
T ss_dssp EEEEECBSSEEEECTTSCC-------CE-EEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECS
T ss_pred ccccccccceeEeeccCCc-------ce-eeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEec
Confidence 3444445567777776542 22 222244567899999865456667677788999998653 22333443
Q ss_pred CCCceEEEEEcCCCCEEE-EEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCC
Q psy14130 218 HPDVINCLSFNRDGSRLV-TTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEN 296 (494)
Q Consensus 218 h~~~v~~l~~~~~~~~l~-s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~ 296 (494)
.......|++++.+..|+ +-...+.|.+.++.... ...+..........+++.|..+.|+.+-+ ...+.|...++.
T Consensus 469 ~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~-~~~l~~~~l~~P~gIaVDp~~g~LYwtD~--g~~~~I~~~~~d 545 (791)
T 3m0c_C 469 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK-RKTLFRENGSKPRAIVVDPVHGFMYWTDW--GTPAKIKKGGLN 545 (791)
T ss_dssp SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS-EEEEEECTTCCEEEEEEETTTTEEEEEEC--SSSCEEEEEETT
T ss_pred CCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCe-EEEEEeCCCCCcceEEEecCCCCEEEecC--CCCCeEEEEecC
Confidence 455677899998775555 55567899999997544 44443333333789999998888988872 123789999887
Q ss_pred CCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccc
Q psy14130 297 DLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCE 376 (494)
Q Consensus 297 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~ 376 (494)
.... ..+. .........+++++.+..||++-...+.|..+++..... ..++.....-....+|++..+ .++++.-.
T Consensus 546 G~~~-~~lv-~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~-~~v~~~~~~l~~P~glav~~~-~lYwtD~~ 621 (791)
T 3m0c_C 546 GVDI-YSLV-TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVFED-KVFWTDII 621 (791)
T ss_dssp SCCE-EEEE-CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECTTTTSSEEEEEEETT-EEEEEETT
T ss_pred CCce-EEEE-eCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCce-EEEecCCCccCCCCEEEEeCC-EEEEEECC
Confidence 5322 2221 123356788999999999989877888899999865543 333322111123457777554 55566544
Q ss_pred eeEEEEee
Q psy14130 377 IFRFFKLH 384 (494)
Q Consensus 377 ~~~~~~l~ 384 (494)
.-+|+.++
T Consensus 622 ~~~I~~~d 629 (791)
T 3m0c_C 622 NEAIFSAN 629 (791)
T ss_dssp TTEEEEEE
T ss_pred CCEEEEEe
Confidence 45555554
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=98.31 E-value=0.00073 Score=62.41 Aligned_cols=183 Identities=9% Similarity=-0.030 Sum_probs=108.4
Q ss_pred ccEEEEEEcCCCCCEEEEEeC-CC-eEEEEECCCCeEEEEec-CCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce
Q psy14130 177 RRVGYIEWHPTAENVVASAGF-DY-LIILWDVGKGEALTVID-CHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLV 253 (494)
Q Consensus 177 ~~V~~~~~~p~~~~~l~s~s~-d~-~v~iwd~~~~~~~~~~~-~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~ 253 (494)
....++++.+++ +++++... ++ .|..+|..+++...... ........++..+++..+++-..++.|..+|..+++.
T Consensus 72 ~~p~gia~~~dG-~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~ 150 (306)
T 2p4o_A 72 GKVSGLAFTSNG-DLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSG 150 (306)
T ss_dssp SEEEEEEECTTS-CEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEE
T ss_pred CCceeEEEcCCC-cEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcE
Confidence 468899999998 56665543 22 47777877776543322 1223345566666555555555689999999876531
Q ss_pred -EEEeee--------cCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCE
Q psy14130 254 -ISQGVC--------HPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRI 324 (494)
Q Consensus 254 -~~~~~~--------~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 324 (494)
+..... ..-.....+ +++++.++++- ...+.|..||+....................++++++|+.
T Consensus 151 ~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d---~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l 225 (306)
T 2p4o_A 151 SIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSN---TEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNL 225 (306)
T ss_dssp EEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEE---TTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCE
T ss_pred eEEEECCccccccccCCCCcCCCc--CcCCCEEEEEe---CCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCE
Confidence 211100 011113444 77767888887 6788999999864111111111111134566889999976
Q ss_pred EEEEEeCCCcEEEEEeeCCCceEEeccccc-CCCCeeEEEEe---cCCc
Q psy14130 325 LFLAGKGDGNIRYYELTNERPYIHFLNQSL-SGAPQRGLGFM---PKRG 369 (494)
Q Consensus 325 l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~-~~~~v~~~~~~---p~~~ 369 (494)
+ ++....+.|.++|.. ++.. . +.... .....++++|. |++.
T Consensus 226 ~-va~~~~~~V~~~~~~-G~~~-~-~~~~~~~~~~p~~~a~~g~~~d~~ 270 (306)
T 2p4o_A 226 Y-GATHIYNSVVRIAPD-RSTT-I-IAQAEQGVIGSTAVAFGQTEGDCT 270 (306)
T ss_dssp E-EECBTTCCEEEECTT-CCEE-E-EECGGGTCTTEEEEEECCSTTTTT
T ss_pred E-EEeCCCCeEEEECCC-CCEE-E-EeecccccCCceEEEEecccCCCC
Confidence 4 777778899999864 5431 1 11111 12457899998 7754
|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=98.29 E-value=0.00016 Score=70.31 Aligned_cols=201 Identities=8% Similarity=-0.004 Sum_probs=120.0
Q ss_pred cEEEEEEcCC--CCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCC---C-eEEEEeCCCC
Q psy14130 178 RVGYIEWHPT--AENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKD---K-TVRVLDPRTG 251 (494)
Q Consensus 178 ~V~~~~~~p~--~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d---~-~v~iwd~~~~ 251 (494)
....++|+|+ + ..|+.+...+.|+.+|+.+++..... ........++|+++|+++++.... . .+...+...+
T Consensus 140 ~P~gvavd~~s~~-g~Lyv~D~~~~I~~id~~~g~v~~~~-~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~ 217 (433)
T 4hw6_A 140 NIWRMMFDPNSNY-DDLYWVGQRDAFRHVDFVNQYVDIKT-TNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASG 217 (433)
T ss_dssp CCCEEEECTTTTT-CEEEEECBTSCEEEEETTTTEEEEEC-CCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGT
T ss_pred CCceEEEccccCC-CEEEEEeCCCCEEEEECCCCEEEEee-cCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCC
Confidence 3468999985 3 24444444489999999877655443 345668999999999944444321 1 2333443322
Q ss_pred ce-EEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEe
Q psy14130 252 LV-ISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGK 330 (494)
Q Consensus 252 ~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~ 330 (494)
.. ...+. .. .....+++.+.++.++++. ..++.|+.+|..+......+...........++++|+++.||++-.
T Consensus 218 ~~~~~~~~-~~-~~P~giavd~~~G~lyv~d---~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~ 292 (433)
T 4hw6_A 218 FTERLSLC-NA-RGAKTCAVHPQNGKIYYTR---YHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYN 292 (433)
T ss_dssp TCCEEEEE-EC-SSBCCCEECTTTCCEEECB---TTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEET
T ss_pred eecccccc-cc-CCCCEEEEeCCCCeEEEEE---CCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeC
Confidence 21 11222 12 2256788888567888777 5778999999875432122222222223346999999998889888
Q ss_pred CCCcEEEEEeeC--CCc--eEEeccccc------------CCCCeeEEEE---------ecCCceeeeccceeEEEEeeC
Q psy14130 331 GDGNIRYYELTN--ERP--YIHFLNQSL------------SGAPQRGLGF---------MPKRGCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 331 ~dg~i~~wd~~~--~~~--~~~~~~~~~------------~~~~v~~~~~---------~p~~~~~~~~~~~~~~~~l~~ 385 (494)
..+.|+.+++.. +.. ...+..... .-....++++ .+++.+.++..+.-+|..+..
T Consensus 293 ~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~ 372 (433)
T 4hw6_A 293 GKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP 372 (433)
T ss_dssp TTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT
T ss_pred CCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC
Confidence 889999988763 221 011111100 1123577898 677777777654455555554
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=98.29 E-value=6.1e-06 Score=78.20 Aligned_cols=140 Identities=16% Similarity=0.034 Sum_probs=102.2
Q ss_pred CEEEEEeCCC----eEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEe----------CCCeEEEEeCCCCceEE
Q psy14130 190 NVVASAGFDY----LIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTC----------KDKTVRVLDPRTGLVIS 255 (494)
Q Consensus 190 ~~l~s~s~d~----~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~----------~d~~v~iwd~~~~~~~~ 255 (494)
..+++...++ +|.++|..+++.+.++.....+ .+.++||+++++.+. .++.|.+||+.+++.+.
T Consensus 33 ~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~ 110 (368)
T 1mda_H 33 RSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIA 110 (368)
T ss_dssp EEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEE
T ss_pred eEEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEE
Confidence 3555555555 8889999999999998755555 799999999988886 37899999999999999
Q ss_pred EeeecC------CCCceEEEEECCCCeEEEEEecCCCCceEEE--EeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEE
Q psy14130 256 QGVCHP------GTRSSKAVFIGDTGRIVTTGFSRHSDRQVGL--WDENDLNTPLALETVDSSSGVLFPYYDHDTRILFL 327 (494)
Q Consensus 256 ~~~~~~------~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~i--wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 327 (494)
++.... +.....+.++|++.+++++.+ ..+..|.+ +|+.+ ...+..... ....|+++..++
T Consensus 111 ~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~--~~~~~v~V~~iD~~t------v~~i~v~~~---~~~~p~g~~~~~ 179 (368)
T 1mda_H 111 DIELPDAPRFSVGPRVHIIGNCASSACLLFFLF--GSSAAAGLSVPGASD------DQLTKSASC---FHIHPGAAATHY 179 (368)
T ss_dssp EEEETTSCSCCBSCCTTSEEECTTSSCEEEEEC--SSSCEEEEEETTTEE------EEEEECSSC---CCCEEEETTEEE
T ss_pred EEECCCccccccCCCcceEEEcCCCCEEEEEcc--CCCCeEEEEEEchhh------ceEEECCCc---eEEccCCCeEEE
Confidence 987541 122578999999888888762 12467888 99876 112221111 234567766767
Q ss_pred EEeCCCcEEEEEeeC
Q psy14130 328 AGKGDGNIRYYELTN 342 (494)
Q Consensus 328 ~g~~dg~i~~wd~~~ 342 (494)
+.+.||.+.+.|+.+
T Consensus 180 ~~~~dg~~~~vd~~~ 194 (368)
T 1mda_H 180 LGSCPASLAASDLAA 194 (368)
T ss_dssp CCCCTTSCEEEECCS
T ss_pred EEcCCCCEEEEECcc
Confidence 778888888888876
|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.28 E-value=0.00047 Score=67.43 Aligned_cols=160 Identities=11% Similarity=0.090 Sum_probs=107.0
Q ss_pred cEEEEEEcCC-CCCEEEEEeCCCeEEEEECCCCeEEEEecCC---CCceEEEEE-------cCCCCEEEEEeCCC-----
Q psy14130 178 RVGYIEWHPT-AENVVASAGFDYLIILWDVGKGEALTVIDCH---PDVINCLSF-------NRDGSRLVTTCKDK----- 241 (494)
Q Consensus 178 ~V~~~~~~p~-~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h---~~~v~~l~~-------~~~~~~l~s~~~d~----- 241 (494)
....|+|+|. ..+++++-...+.|++.|+.++.....+... ......|+| +++|..|+.+...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 4678999984 4355555555578999999887765544321 235899999 99999777666543
Q ss_pred --eEEEEeCCC-CceE-----EEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCC-------CCCC-----c
Q psy14130 242 --TVRVLDPRT-GLVI-----SQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEN-------DLNT-----P 301 (494)
Q Consensus 242 --~v~iwd~~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~-------~~~~-----~ 301 (494)
.|.+++... +... ..+.... ....++..|+++.|+++. ..++.|..+|+. +... +
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~~--~p~giavdp~~g~LYvtd---~~~g~V~r~d~~~~~~~~~tg~~~tp~~~ 294 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAYK--QCNGATIHPINGELYFNS---YEKGQVFRLDLVDYFKTIKNGGSWDPIVK 294 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEES--CCCCEEECTTTCCEEEEE---TTTTEEEEECHHHHHHHHHTTCCCCCBGG
T ss_pred CceEEEEecCCCCceeecccceeeccCC--CceEEEEcCCCCeEEEEE---CCCCEEEEEecccccccccCceeeccccc
Confidence 266676443 2221 2222222 246778889778999888 688899999987 4332 0
Q ss_pred ------eeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeC
Q psy14130 302 ------LALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTN 342 (494)
Q Consensus 302 ------~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~ 342 (494)
..+...........++|+|+++.||++-.....|+.++...
T Consensus 295 ~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg 341 (496)
T 3kya_A 295 NNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDE 341 (496)
T ss_dssp GCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred ccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCC
Confidence 01222223344678999999998888888889999987764
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=98.25 E-value=0.00064 Score=63.27 Aligned_cols=195 Identities=9% Similarity=-0.036 Sum_probs=115.5
Q ss_pred ccEEEEEEcC-CCCCEEEEEeCCCeEEEEECCCCeEEEEecC-----CCCceEEEEEcC-CCCEEEEEeC----------
Q psy14130 177 RRVGYIEWHP-TAENVVASAGFDYLIILWDVGKGEALTVIDC-----HPDVINCLSFNR-DGSRLVTTCK---------- 239 (494)
Q Consensus 177 ~~V~~~~~~p-~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~-----h~~~v~~l~~~~-~~~~l~s~~~---------- 239 (494)
..+.++++.+ ++ + |+.+...+.|..+|..++.. ..+.. .......+++.+ +|++.++...
T Consensus 80 ~~p~gi~~~~~~g-~-l~v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~ 156 (322)
T 2fp8_A 80 GRTYDISYNLQNN-Q-LYIVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQ 156 (322)
T ss_dssp CCEEEEEEETTTT-E-EEEEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHH
T ss_pred CCCceEEEcCCCC-c-EEEEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccce
Confidence 3578999998 55 4 44454455688888765532 22211 123478899999 9987776533
Q ss_pred -------CCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCC--ceeEeeecCC
Q psy14130 240 -------DKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNT--PLALETVDSS 310 (494)
Q Consensus 240 -------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~--~~~~~~~~~~ 310 (494)
++.|..||..+++.......-.. ...+++.+++..++++. ...+.|.+|++..... ...+.. ..
T Consensus 157 ~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~--p~gia~~~dg~~lyv~d---~~~~~I~~~~~~~~~~~~~~~~~~--~~ 229 (322)
T 2fp8_A 157 IMDTSDKTGRLIKYDPSTKETTLLLKELHV--PGGAEVSADSSFVLVAE---FLSHQIVKYWLEGPKKGTAEVLVK--IP 229 (322)
T ss_dssp HHHHTCCCEEEEEEETTTTEEEEEEEEESC--CCEEEECTTSSEEEEEE---GGGTEEEEEESSSTTTTCEEEEEE--CS
T ss_pred ehcccCCCceEEEEeCCCCEEEEeccCCcc--CcceEECCCCCEEEEEe---CCCCeEEEEECCCCcCCccceEEe--CC
Confidence 36799999887764332222122 57789999866677776 5678999999875321 111111 12
Q ss_pred CceEEeEEeCCCCEEEEEEeC----------CCcEEEEEeeCCCceEEeccccc-CCCCeeEEEEecCCceeeec--cce
Q psy14130 311 SGVLFPYYDHDTRILFLAGKG----------DGNIRYYELTNERPYIHFLNQSL-SGAPQRGLGFMPKRGCDVTQ--CEI 377 (494)
Q Consensus 311 ~~v~~~~~~~~~~~l~~~g~~----------dg~i~~wd~~~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~~~~--~~~ 377 (494)
. ...++++++|+.. ++... .+.|..+|.. ++.+..+...-. ....+.++++ .++.+.++. ...
T Consensus 230 g-P~gi~~d~~G~l~-va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~ 305 (322)
T 2fp8_A 230 N-PGNIKRNADGHFW-VSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGS 305 (322)
T ss_dssp S-EEEEEECTTSCEE-EEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSE
T ss_pred C-CCCeEECCCCCEE-EEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCc
Confidence 2 6778999999865 55433 4567777753 444332221100 0134666666 466666664 445
Q ss_pred eEEEEeeC
Q psy14130 378 FRFFKLHT 385 (494)
Q Consensus 378 ~~~~~l~~ 385 (494)
+..+++..
T Consensus 306 i~~~~~~~ 313 (322)
T 2fp8_A 306 VGILVYDK 313 (322)
T ss_dssp EEEEEC--
T ss_pred eEEEeccc
Confidence 55555443
|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=98.25 E-value=0.00049 Score=66.91 Aligned_cols=228 Identities=9% Similarity=0.071 Sum_probs=132.6
Q ss_pred CcEEEEEEc-CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCC---C-eEEEEECCCCeE-EE
Q psy14130 140 GGAFLVLPI-HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFD---Y-LIILWDVGKGEA-LT 213 (494)
Q Consensus 140 ~g~~~~~~~-~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d---~-~v~iwd~~~~~~-~~ 213 (494)
+|.+.++.. +.|+.++..++.. ..+.+......+++|++++ +++++.... . .+...+...+.. ..
T Consensus 152 ~g~Lyv~D~~~~I~~id~~~g~v--------~~~~~~~~~P~giavd~dG-~lyVad~~~~~~~~gv~~~~~~~~~~~~~ 222 (433)
T 4hw6_A 152 YDDLYWVGQRDAFRHVDFVNQYV--------DIKTTNIGQCADVNFTLNG-DMVVVDDQSSDTNTGIYLFTRASGFTERL 222 (433)
T ss_dssp TCEEEEECBTSCEEEEETTTTEE--------EEECCCCSCEEEEEECTTC-CEEEEECCSCTTSEEEEEECGGGTTCCEE
T ss_pred CCEEEEEeCCCCEEEEECCCCEE--------EEeecCCCCccEEEECCCC-CEEEEcCCCCcccceEEEEECCCCeeccc
Confidence 466666655 6788898876522 2233344568899999999 566655421 1 233333322111 01
Q ss_pred EecCCCCceEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceEEEee-ecCCCCceEEEEECCCCeEEEEEecCCCCceEE
Q psy14130 214 VIDCHPDVINCLSFNR-DGSRLVTTCKDKTVRVLDPRTGLVISQGV-CHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVG 291 (494)
Q Consensus 214 ~~~~h~~~v~~l~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~ 291 (494)
.+. .......++++| +|.++++-..++.|+.+|..++.....+. .........+++.|+++.++++- ...+.|+
T Consensus 223 ~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad---~~~~~I~ 298 (433)
T 4hw6_A 223 SLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIY---NGKHCIY 298 (433)
T ss_dssp EEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEE---TTTTEEE
T ss_pred ccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEe---CCCCEEE
Confidence 121 234456789999 77766666678899999998787533332 22222234699999977788887 6788999
Q ss_pred EEeCCCCC----CceeEeee-c------------CCCceEEeEE---------eCCCCEEEEEEeCCCcEEEEEeeCCCc
Q psy14130 292 LWDENDLN----TPLALETV-D------------SSSGVLFPYY---------DHDTRILFLAGKGDGNIRYYELTNERP 345 (494)
Q Consensus 292 iwd~~~~~----~~~~~~~~-~------------~~~~v~~~~~---------~~~~~~l~~~g~~dg~i~~wd~~~~~~ 345 (494)
.++..... .+..+... . .-.....+++ ++++. ||++-...+.|+.++. ++..
T Consensus 299 ~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~-lyvaD~~n~~I~~~~~-~G~v 376 (433)
T 4hw6_A 299 RVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYD-FYFCDRDSHTVRVLTP-EGRV 376 (433)
T ss_dssp EEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEE-EEEEETTTTEEEEECT-TSEE
T ss_pred EEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCc-EEEEECCCCEEEEECC-CCCE
Confidence 98865211 11112111 0 0123556788 55554 5588777888999884 4432
Q ss_pred eEEeccccc---------------CCCCeeEEEEe-cCCceeeeccceeEEEEe
Q psy14130 346 YIHFLNQSL---------------SGAPQRGLGFM-PKRGCDVTQCEIFRFFKL 383 (494)
Q Consensus 346 ~~~~~~~~~---------------~~~~v~~~~~~-p~~~~~~~~~~~~~~~~l 383 (494)
..+...-. .-....+|++. +++.+.++..+.-||.++
T Consensus 377 -~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i 429 (433)
T 4hw6_A 377 -TTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKI 429 (433)
T ss_dssp -EEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEE
T ss_pred -EEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEE
Confidence 22221100 01346889999 678888876444444433
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.23 E-value=0.0027 Score=59.73 Aligned_cols=196 Identities=4% Similarity=-0.150 Sum_probs=123.1
Q ss_pred CCcEEEEEEc--CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEec
Q psy14130 139 GGGAFLVLPI--HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVID 216 (494)
Q Consensus 139 ~~g~~~~~~~--~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~ 216 (494)
.++.+.++.. +.|..+++.... ....+.........+++.+.+.+++++-...+.|.+.++........+.
T Consensus 83 ~~~~ly~~D~~~~~I~r~~~~g~~-------~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~ 155 (349)
T 3v64_C 83 RRELVFWSDVTLDRILRANLNGSN-------VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW 155 (349)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCS-------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC
T ss_pred cccEEEEEeccCCceEEEecCCCC-------ceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEe
Confidence 3445555543 357777766542 1111222223456889988665677777778899999987544333344
Q ss_pred CCCCceEEEEEcCCCCEEEEEe-CC-CeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEe
Q psy14130 217 CHPDVINCLSFNRDGSRLVTTC-KD-KTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWD 294 (494)
Q Consensus 217 ~h~~~v~~l~~~~~~~~l~s~~-~d-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd 294 (494)
..-.....++++|.+..|+.+. .. +.|..+++.... ...+..........+++.+++++|+.+- ...+.|..+|
T Consensus 156 ~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~~~~~~~~PnGla~d~~~~~lY~aD---~~~~~I~~~~ 231 (349)
T 3v64_C 156 QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG-RRIIADTHLFWPNGLTIDYAGRRMYWVD---AKHHVIERAN 231 (349)
T ss_dssp TTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEESCCSSCSCEEEEEEETTTTEEEEEE---TTTTEEEEEE
T ss_pred CCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC-cEEEEECCCCCcceEEEeCCCCEEEEEE---CCCCEEEEEe
Confidence 4446678999999655555444 44 789999887433 3333222222378899999889999988 6788999999
Q ss_pred CCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEe
Q psy14130 295 ENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHF 349 (494)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~ 349 (494)
+..... ..+.. ........+++ ++..||++-...+.|..++..+++....+
T Consensus 232 ~dG~~~-~~~~~-~~~~~P~giav--~~~~ly~td~~~~~V~~~~~~~G~~~~~i 282 (349)
T 3v64_C 232 LDGSHR-KAVIS-QGLPHPFAITV--FEDSLYWTDWHTKSINSANKFTGKNQEII 282 (349)
T ss_dssp TTSCSC-EEEEC-SSCSSEEEEEE--ETTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred CCCCce-EEEEe-CCCCCceEEEE--ECCEEEEecCCCCeEEEEEccCCCccEEe
Confidence 875332 22211 12334566666 34577788888888988886677654443
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.23 E-value=0.0024 Score=61.06 Aligned_cols=197 Identities=4% Similarity=-0.153 Sum_probs=123.4
Q ss_pred CCcEEEEEEc--CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEec
Q psy14130 139 GGGAFLVLPI--HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVID 216 (494)
Q Consensus 139 ~~g~~~~~~~--~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~ 216 (494)
.++.+.++.. +.|..+++.... ....+.........+++.+.+.+++++-...+.|.+.++........+.
T Consensus 126 ~~~~ly~~D~~~~~I~r~~~~g~~-------~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~ 198 (386)
T 3v65_B 126 RRELVFWSDVTLDRILRANLNGSN-------VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW 198 (386)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCC-------EEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEEC
T ss_pred CCCeEEEEeCCCCcEEEEecCCCC-------cEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeec
Confidence 3445555543 346777766542 1111222223456788887665667777777889998886544333344
Q ss_pred CCCCceEEEEEcCCCCEEEEEe-CC-CeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEe
Q psy14130 217 CHPDVINCLSFNRDGSRLVTTC-KD-KTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWD 294 (494)
Q Consensus 217 ~h~~~v~~l~~~~~~~~l~s~~-~d-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd 294 (494)
........++++|.+..|+.+. .. +.|..+++.... ...+..........+++.+++++|+.+- ...+.|..+|
T Consensus 199 ~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~~~~~~~~PnGlavd~~~~~lY~aD---~~~~~I~~~d 274 (386)
T 3v65_B 199 QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG-RRIIADTHLFWPNGLTIDYAGRRMYWVD---AKHHVIERAN 274 (386)
T ss_dssp SSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEEEECSSCSCEEEEEEEGGGTEEEEEE---TTTTEEEEEC
T ss_pred CCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCC-cEEEEECCCCCeeeEEEeCCCCEEEEEE---CCCCEEEEEe
Confidence 4446789999999766655554 34 688888887443 2233222222378899998888999988 6788999999
Q ss_pred CCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEec
Q psy14130 295 ENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFL 350 (494)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~ 350 (494)
+..... ..+.. ........+++ ++..||++-...+.|..++..+++....+.
T Consensus 275 ~dG~~~-~~~~~-~~~~~P~giav--~~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 275 LDGSHR-KAVIS-QGLPHPFAITV--FEDSLYWTDWHTKSINSANKFTGKNQEIIR 326 (386)
T ss_dssp TTSCSC-EEEEC-SSCSSEEEEEE--ETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred CCCCee-EEEEE-CCCCCceEEEE--ECCEEEEeeCCCCeEEEEECCCCcceEEEc
Confidence 875332 22221 12344566677 345677888888999999876776544443
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
Probab=98.22 E-value=0.0046 Score=59.39 Aligned_cols=202 Identities=7% Similarity=-0.135 Sum_probs=125.7
Q ss_pred CCcEEEEEEc--CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEec
Q psy14130 139 GGGAFLVLPI--HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVID 216 (494)
Q Consensus 139 ~~g~~~~~~~--~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~ 216 (494)
.++.+.++.. +.|..+++....... .....+.........+++.+.+.+++++-...+.|.+.++........+.
T Consensus 122 ~~~~lywsD~~~~~I~~~~~~g~~~~~---~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~ 198 (400)
T 3p5b_L 122 ASNRIYWSDLSQRMICSTQLDRAHGVS---SYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR 198 (400)
T ss_dssp TTTEEEEEETTTTEEEEEEC------C---CCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEE
T ss_pred ccCceEEEecCCCeEEEEEcccCCCCC---cceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEe
Confidence 3455555543 346667765421000 11122222345678899998554677777778899999987655444444
Q ss_pred CCCCceEEEEEcCCCCEEEEEeC--CCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEe
Q psy14130 217 CHPDVINCLSFNRDGSRLVTTCK--DKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWD 294 (494)
Q Consensus 217 ~h~~~v~~l~~~~~~~~l~s~~~--d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd 294 (494)
........|+++|.+..|+.+.. .+.|...++..... ..+....-.....+++.+++++|+.+- ...+.|..+|
T Consensus 199 ~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~-~~~~~~~l~~P~glavd~~~~~lY~aD---~~~~~I~~~d 274 (400)
T 3p5b_L 199 ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLVTENIQWPNGITLDLLSGRLYWVD---SKLHSISSID 274 (400)
T ss_dssp CSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSC-EEEECSSCSCEEEEEEETTTTEEEEEE---TTTTEEEEEE
T ss_pred CCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCcc-EEEEECCCCceEEEEEEeCCCEEEEEE---CCCCEEEEEe
Confidence 44556899999997666665553 37899999874433 333222222378999998888999988 6788999999
Q ss_pred CCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEe
Q psy14130 295 ENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHF 349 (494)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~ 349 (494)
+....................+++ ++..||++-...+.|..+|..+++....+
T Consensus 275 ~dG~~~~~~~~~~~~l~~P~gl~v--~~~~lywtd~~~~~V~~~~~~~G~~~~~i 327 (400)
T 3p5b_L 275 VNGGNRKTILEDEKRLAHPFSLAV--FEDKVFWTDIINEAIFSANRLTGSDVNLL 327 (400)
T ss_dssp TTSCCCEEEEECSSTTSSEEEEEE--ETTEEEEEESSSCSEEEEESSSCCCCEEE
T ss_pred CCCCccEEEEeCCCCCCCCEEEEE--eCCEEEEecCCCCeEEEEEcCCCCceEEE
Confidence 875333222221112234455555 45677788888889999998777764444
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.21 E-value=0.0004 Score=67.52 Aligned_cols=156 Identities=13% Similarity=0.074 Sum_probs=104.0
Q ss_pred cEEEEEEcC-CCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeC-CC----eEEEEeCCCC
Q psy14130 178 RVGYIEWHP-TAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCK-DK----TVRVLDPRTG 251 (494)
Q Consensus 178 ~V~~~~~~p-~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~-d~----~v~iwd~~~~ 251 (494)
....|+++| ++ ..|+.+...+.|+.+|+..+....... .......|+|+++|++|+.+.. ++ .+..++. .+
T Consensus 138 ~P~~lavdp~~~-g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g 214 (430)
T 3tc9_A 138 GAVWLSFDPKNH-NHLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ES 214 (430)
T ss_dssp CCCEEEEETTEE-EEEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GG
T ss_pred CCCEEEECCCCC-CeEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CC
Confidence 346889998 34 345555444889999998766444333 5567889999999996666654 21 3444443 33
Q ss_pred ceE--EEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEE
Q psy14130 252 LVI--SQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAG 329 (494)
Q Consensus 252 ~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g 329 (494)
... ..+.... ....+++.|+++.++++. ..++.|..+|...... ..+...........++++|++++||++-
T Consensus 215 ~~~~~~~l~~~~--~p~giavdp~~g~lyv~d---~~~~~V~~~~~~~~~~-~~~~~~~~~~~P~gia~~pdG~~lyv~d 288 (430)
T 3tc9_A 215 GFKVITELTKGQ--NCNGAETHPINGELYFNS---WNAGQVFRYDFTTQET-TPLFTIQDSGWEFHIQFHPSGNYAYIVV 288 (430)
T ss_dssp TSCSEEEEEECS--SCCCEEECTTTCCEEEEE---TTTTEEEEEETTTTEE-EEEEECSSSSCCEEEEECTTSSEEEEEE
T ss_pred ceeeeeeeccCC--CceEEEEeCCCCEEEEEE---CCCCEEEEEECCCCcE-EEEEEcCCCCcceeEEEcCCCCEEEEEE
Confidence 321 2232221 257788888668888887 5788999999875322 1222222334577899999999888988
Q ss_pred eCCCcEEEEEeeC
Q psy14130 330 KGDGNIRYYELTN 342 (494)
Q Consensus 330 ~~dg~i~~wd~~~ 342 (494)
...+.|..++...
T Consensus 289 ~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 289 VNQHYILRSDYDW 301 (430)
T ss_dssp TTTTEEEEEEEET
T ss_pred CCCCEEEEEeCCc
Confidence 8889999998874
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.21 E-value=0.00091 Score=65.02 Aligned_cols=229 Identities=10% Similarity=0.037 Sum_probs=129.0
Q ss_pred CcEEEEEEc-CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCC----eEEEEECCCCeE-EE
Q psy14130 140 GGAFLVLPI-HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDY----LIILWDVGKGEA-LT 213 (494)
Q Consensus 140 ~g~~~~~~~-~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~----~v~iwd~~~~~~-~~ 213 (494)
++.+.+... +.|+.+|...+. +..+.........++|++++..++++...++ .+.+.+....-. ..
T Consensus 149 ~g~Lyv~d~~~~I~~id~~~~~--------v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~ 220 (430)
T 3tc9_A 149 HNHLYLVGEQHPTRLIDFEKEY--------VSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVIT 220 (430)
T ss_dssp EEEEEEEEBTEEEEEEETTTTE--------EEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEE
T ss_pred CCeEEEEeCCCcEEEEECCCCE--------EEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeee
Confidence 355666555 678888887652 1222224456789999999832455444222 344444322111 12
Q ss_pred EecCCCCceEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEE
Q psy14130 214 VIDCHPDVINCLSFNR-DGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGL 292 (494)
Q Consensus 214 ~~~~h~~~v~~l~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~i 292 (494)
.+.. ......++++| +|.++++-..++.|..+|+..+................+++.|++..++++. ...+.|..
T Consensus 221 ~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d---~~~~~I~~ 296 (430)
T 3tc9_A 221 ELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVV---VNQHYILR 296 (430)
T ss_dssp EEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEE---TTTTEEEE
T ss_pred eecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEE---CCCCEEEE
Confidence 2221 23456788999 7777777767899999999876642222222222367899999977688887 67889999
Q ss_pred EeCCCCCC----ceeEeeecC-------------CCceE-EeEEe--------CCCCEEEEEEeCCCcEEEEEeeCCCce
Q psy14130 293 WDENDLNT----PLALETVDS-------------SSGVL-FPYYD--------HDTRILFLAGKGDGNIRYYELTNERPY 346 (494)
Q Consensus 293 wd~~~~~~----~~~~~~~~~-------------~~~v~-~~~~~--------~~~~~l~~~g~~dg~i~~wd~~~~~~~ 346 (494)
++...... +..+..... -.... .++.. +++ .||++-...+.|+.++ .+++.
T Consensus 297 ~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g-~lyvaD~~n~~I~~i~-~~G~v- 373 (430)
T 3tc9_A 297 SDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEY-DFYFCDRENHCIRILT-PQGRV- 373 (430)
T ss_dssp EEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCE-EEEEEEGGGTEEEEEC-TTSEE-
T ss_pred EeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCC-eEEEEECCCcEEEEEC-CCCcE-
Confidence 88653211 111111100 01122 34443 233 4557777778888888 34432
Q ss_pred EEeccc----cc-----------CCCCeeEEEEec-CCceeeeccceeEEEEe
Q psy14130 347 IHFLNQ----SL-----------SGAPQRGLGFMP-KRGCDVTQCEIFRFFKL 383 (494)
Q Consensus 347 ~~~~~~----~~-----------~~~~v~~~~~~p-~~~~~~~~~~~~~~~~l 383 (494)
...... .. .-....+|++.| ++.++++..+.-||.++
T Consensus 374 ~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i 426 (430)
T 3tc9_A 374 TTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKI 426 (430)
T ss_dssp EEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEE
T ss_pred EEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEE
Confidence 222211 00 012478999999 57777776444444443
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=98.13 E-value=0.00017 Score=75.65 Aligned_cols=204 Identities=12% Similarity=0.023 Sum_probs=110.7
Q ss_pred cccc-cEEEEEEc-CCCCCEEEEEeCCC----eEEEEECCCC-eEEE-EecCCCCceEEEEEcCCCCEEEEEeCC-----
Q psy14130 174 GHKR-RVGYIEWH-PTAENVVASAGFDY----LIILWDVGKG-EALT-VIDCHPDVINCLSFNRDGSRLVTTCKD----- 240 (494)
Q Consensus 174 ~h~~-~V~~~~~~-p~~~~~l~s~s~d~----~v~iwd~~~~-~~~~-~~~~h~~~v~~l~~~~~~~~l~s~~~d----- 240 (494)
+|.- .+...+|| |+|..++++.+.+| +|+++|+.++ +.+. .+. ....+++|+|||+.|+....|
T Consensus 170 ~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~ 246 (751)
T 2xe4_A 170 GKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRE 246 (751)
T ss_dssp TCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCE
T ss_pred CCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCC
Confidence 3443 67889999 99953444444333 5999999988 6321 111 123468899999988877765
Q ss_pred CeEEEEeCCCCce--EEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCce--eEeeecCCCceEEe
Q psy14130 241 KTVRVLDPRTGLV--ISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPL--ALETVDSSSGVLFP 316 (494)
Q Consensus 241 ~~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~--~~~~~~~~~~v~~~ 316 (494)
..|..+++.++.. ...+............|++++..|+.+.. ......|.++|+.+..... .............+
T Consensus 247 ~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~-~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~ 325 (751)
T 2xe4_A 247 NKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQ-SPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDV 325 (751)
T ss_dssp EEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEE-CSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEE
T ss_pred CEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEec-CCCCceEEEEECCCCCCCceeEEeecCCCCceEEE
Confidence 3688889887642 22222222222567789999777776652 2245678999987642211 11111112233334
Q ss_pred EEeCCCCEEEEEEeCC--C--cEEEEEeeCCCceEE-ecccccCCCCeeEEEEecCCceeee--ccceeEEEEee
Q psy14130 317 YYDHDTRILFLAGKGD--G--NIRYYELTNERPYIH-FLNQSLSGAPQRGLGFMPKRGCDVT--QCEIFRFFKLH 384 (494)
Q Consensus 317 ~~~~~~~~l~~~g~~d--g--~i~~wd~~~~~~~~~-~~~~~~~~~~v~~~~~~p~~~~~~~--~~~~~~~~~l~ 384 (494)
.|+. ++.|++....+ + .|..+|+.++..... ++.. .....+.++.+..+ .++++ .++..++|.+.
T Consensus 326 ~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~-~~~~~l~~~~~~~~-~lv~~~~~~g~~~l~~~d 397 (751)
T 2xe4_A 326 QMHG-TSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDH-SEDVFMESIAVRSN-YLVVAGRRAGLTRIWTMM 397 (751)
T ss_dssp EEET-TTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECC-CSSEEEEEEEECSS-EEEEEEEETTEEEEEEEE
T ss_pred eeee-CCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECC-CCCcEEEEEEEECC-EEEEEEEeCCEEEEEEEe
Confidence 4333 66665665554 3 455556544211112 2221 11123455555533 23333 26666666554
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=98.12 E-value=0.01 Score=62.60 Aligned_cols=195 Identities=7% Similarity=0.017 Sum_probs=121.1
Q ss_pred cccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEec----CCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy14130 176 KRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVID----CHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTG 251 (494)
Q Consensus 176 ~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~----~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~ 251 (494)
...|.++...+++ ++|..|+.++-|..+|..+++...... .....|.++...++|.+.+.+ . +-|.+||..++
T Consensus 405 ~~~v~~i~~d~~g-~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~ 481 (795)
T 4a2l_A 405 SNNIKAVYVDEKK-SLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-L-SALVRFNPEQR 481 (795)
T ss_dssp CSCEEEEEEETTT-TEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-S-SCEEEEETTTT
T ss_pred CccEEEEEEcCCC-CEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-c-CceeEEeCCCC
Confidence 3579999998887 546667777789999998876433221 134679999999888866554 4 45889999877
Q ss_pred ceEEEeee-----cCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEee-----ecCCCceEEeEEeCC
Q psy14130 252 LVISQGVC-----HPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALET-----VDSSSGVLFPYYDHD 321 (494)
Q Consensus 252 ~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~-----~~~~~~v~~~~~~~~ 321 (494)
+....... -....+..+...++ +.+.++. . +-|..||..+... .... .-....|.++..+++
T Consensus 482 ~~~~~~~~~~~~~~~~~~i~~i~~d~~-g~lWigt----~-~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~ 553 (795)
T 4a2l_A 482 SFTTIEKEKDGTPVVSKQITTLFRDSH-KRLWIGG----E-EGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASN 553 (795)
T ss_dssp EEEECCBCTTCCBCCCCCEEEEEECTT-CCEEEEE----S-SCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTT
T ss_pred eEEEccccccccccCCceEEEEEECCC-CCEEEEe----C-CceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCC
Confidence 64322211 11122566655555 5666655 3 4588888765322 1110 012246888888999
Q ss_pred CCEEEEEEeCCCcEEEEEeeCCCceEEecc-cccCCCCeeEEEEecCCceeeeccceeEEEEeeC
Q psy14130 322 TRILFLAGKGDGNIRYYELTNERPYIHFLN-QSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 322 ~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~-~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~~ 385 (494)
|... ++. .. -|..||..+++. ..+.. .-.....|.++...++|.+.++...-+..|+...
T Consensus 554 g~lW-igT-~~-Gl~~~d~~~~~~-~~~~~~~gl~~~~i~~i~~d~~g~lWi~t~~Gl~~~~~~~ 614 (795)
T 4a2l_A 554 GIIW-VGT-RE-GFYCFNEKDKQI-KRYNTTNGLPNNVVYGILEDSFGRLWLSTNRGISCFNPET 614 (795)
T ss_dssp SCEE-EEE-SS-CEEEEETTTTEE-EEECGGGTCSCSCEEEEEECTTSCEEEEETTEEEEEETTT
T ss_pred CCEE-EEe-CC-CceeECCCCCcE-EEeCCCCCCchhheEEEEECCCCCEEEEcCCceEEEcCCC
Confidence 8876 433 33 588888776642 22211 1112356888988888887777655555555443
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.11 E-value=0.0083 Score=62.69 Aligned_cols=202 Identities=7% Similarity=-0.137 Sum_probs=125.7
Q ss_pred CcEEEEEEcC--cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecC
Q psy14130 140 GGAFLVLPIH--RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDC 217 (494)
Q Consensus 140 ~g~~~~~~~~--~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~ 217 (494)
++.++++... .|+.+++....... .....+.........|++.+.+.+++++-...+.|.+.++........+..
T Consensus 435 ~~~lY~sD~~~~~I~~~~l~g~~~~~---~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~ 511 (791)
T 3m0c_C 435 SNRIYWSDLSQRMICSTQLDRAHGVS---SYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE 511 (791)
T ss_dssp TTEEEEEETTTTEEEEEEC-----------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEEC
T ss_pred CCeeEEeeccceeEEEEeccCCCCCc---ceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeC
Confidence 4555555543 46666665421100 111222223345678999887766777777889999999975544444444
Q ss_pred CCCceEEEEEcCCCCEEEEEeC-C-CeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeC
Q psy14130 218 HPDVINCLSFNRDGSRLVTTCK-D-KTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDE 295 (494)
Q Consensus 218 h~~~v~~l~~~~~~~~l~s~~~-d-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~ 295 (494)
.......|+++|.+..|+.+.. . +.|...++.... ...+....-.....+++.+.+++|+++- .....|...|+
T Consensus 512 ~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~-~~~lv~~~l~~P~GLavD~~~~~LYwaD---~~~~~I~~~d~ 587 (791)
T 3m0c_C 512 NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQWPNGITLDLLSGRLYWVD---SKLHSISSIDV 587 (791)
T ss_dssp TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC-EEEEECSSCSCEEEEEEETTTTEEEEEE---TTTTEEEEEET
T ss_pred CCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCc-eEEEEeCCCCCceEEEEecCCCeEEEEe---CCCCcEEEEec
Confidence 4566899999997666665553 3 789999987443 3333333323378999998888999987 67889999998
Q ss_pred CCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEec
Q psy14130 296 NDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFL 350 (494)
Q Consensus 296 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~ 350 (494)
....................+++ ++..||++-...+.|...+..+++....+.
T Consensus 588 dG~~~~~v~~~~~~l~~P~glav--~~~~lYwtD~~~~~I~~~dk~tG~~~~~l~ 640 (791)
T 3m0c_C 588 NGGNRKTILEDEKRLAHPFSLAV--FEDKVFWTDIINEAIFSANRLTGSDVNLLA 640 (791)
T ss_dssp TSCSCEEEEECTTTTSSEEEEEE--ETTEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred CCCceEEEecCCCccCCCCEEEE--eCCEEEEEECCCCEEEEEeCCCCcceEEee
Confidence 75433222211111233445555 455788888888899999887876654443
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=98.10 E-value=0.00017 Score=67.18 Aligned_cols=174 Identities=12% Similarity=0.063 Sum_probs=111.0
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEE
Q psy14130 190 NVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAV 269 (494)
Q Consensus 190 ~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 269 (494)
..+..++.++.|..+|.. ++.......+...+.++...+++. +..++.++.|..+|.. ++.+..+...... +..+.
T Consensus 108 ~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~-~~~~~ 183 (330)
T 3hxj_A 108 DILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAI-TSAAS 183 (330)
T ss_dssp TEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCC-CSCCE
T ss_pred CEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCc-eeeeE
Confidence 367778889999999998 777777665666677778887776 5567788999999999 8877666544433 55555
Q ss_pred EECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEe
Q psy14130 270 FIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHF 349 (494)
Q Consensus 270 ~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~ 349 (494)
..++ +. +..| + +.|..+| .+....... ......+.++..++++... + ++.++.|..+|. +++.+...
T Consensus 184 ~d~~-g~-l~v~---t--~~l~~~d-~~g~~~~~~--~~~~~~~~~~~~~~~g~l~-v-~t~~~gl~~~~~-~g~~~~~~ 250 (330)
T 3hxj_A 184 IGKD-GT-IYFG---S--DKVYAIN-PDGTEKWNF--YAGYWTVTRPAISEDGTIY-V-TSLDGHLYAINP-DGTEKWRF 250 (330)
T ss_dssp ECTT-CC-EEEE---S--SSEEEEC-TTSCEEEEE--CCSSCCCSCCEECTTSCEE-E-EETTTEEEEECT-TSCEEEEE
T ss_pred EcCC-CE-EEEE---e--CEEEEEC-CCCcEEEEE--ccCCcceeceEECCCCeEE-E-EcCCCeEEEECC-CCCEeEEe
Confidence 5444 44 4456 3 7789999 443332221 1223457778888887655 3 456788888873 45443332
Q ss_pred cccccCCCCeeEEEEecCCceeeec-cceeEEEEe
Q psy14130 350 LNQSLSGAPQRGLGFMPKRGCDVTQ-CEIFRFFKL 383 (494)
Q Consensus 350 ~~~~~~~~~v~~~~~~p~~~~~~~~-~~~~~~~~l 383 (494)
.. ....+.++.+.+++.+.+.. ++.+..++.
T Consensus 251 ~~---~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~ 282 (330)
T 3hxj_A 251 KT---GKRIESSPVIGNTDTIYFGSYDGHLYAINP 282 (330)
T ss_dssp EC---SSCCCSCCEECTTSCEEEECTTCEEEEECT
T ss_pred eC---CCCccccceEcCCCeEEEecCCCCEEEECC
Confidence 21 12234456666677666554 445666653
|
| >4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* | Back alignment and structure |
|---|
Probab=98.06 E-value=0.0099 Score=60.59 Aligned_cols=219 Identities=9% Similarity=-0.050 Sum_probs=140.6
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.|+..++.+... .....+. .-..+..++|++.+..++++-..++.|..+++........+.........|+++
T Consensus 15 ~~I~~i~l~~~~~-----~~~~~~~-~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD 88 (628)
T 4a0p_A 15 ADIRRISLETNNN-----NVAIPLT-GVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVD 88 (628)
T ss_dssp TEEEEEESSCTTC-----EEECCCC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEE
T ss_pred CcEEEEECCCCCc-----ceEEEcC-CCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEE
Confidence 4688888876521 1111122 234578999999765666676778999999987554433344333467789998
Q ss_pred CCCCEE-EEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee
Q psy14130 229 RDGSRL-VTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV 307 (494)
Q Consensus 229 ~~~~~l-~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~ 307 (494)
+.+..| ++-...+.|.+.++.... ...+..........++..|..+.++.+-+ +..+.|...++..... ..+.
T Consensus 89 ~~~~~LY~tD~~~~~I~v~~~dG~~-~~~l~~~~l~~P~~iavdp~~G~lY~tD~--g~~~~I~r~~~dG~~~-~~l~-- 162 (628)
T 4a0p_A 89 WLGKNLYWADTGTNRIEVSKLDGQH-RQVLVWKDLDSPRALALDPAEGFMYWTEW--GGKPKIDRAAMDGSER-TTLV-- 162 (628)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSTT-CEEEECSSCCCEEEEEEETTTTEEEEEEC--SSSCEEEEEETTSCSC-EEEE--
T ss_pred eCCCEEEEEECCCCEEEEEecCCCc-EEEEEeCCCCCcccEEEccCCCeEEEeCC--CCCCEEEEEeCCCCce-EEEE--
Confidence 865555 444557899999987544 22332223333789999998788888873 2357888888865433 2222
Q ss_pred cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccceeEEEEee
Q psy14130 308 DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLH 384 (494)
Q Consensus 308 ~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~ 384 (494)
........++++++++.||++-...+.|..+|+..... . .+.. ......++++.. +.+.++.-..-+|+.++
T Consensus 163 ~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~-v~~~--~l~~P~glav~~-~~ly~tD~~~~~I~~~d 234 (628)
T 4a0p_A 163 PNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-E-VIAD--DLPHPFGLTQYQ-DYIYWTDWSRRSIERAN 234 (628)
T ss_dssp CSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-E-EEEE--CCSCEEEEEEET-TEEEEEETTTTEEEEEE
T ss_pred CCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-E-Eeec--cCCCceEEEEEC-CEEEEecCCCCEEEEEE
Confidence 24456788999999999989988889999999976543 2 2222 123356888876 45666653333444443
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=98.05 E-value=0.00036 Score=72.08 Aligned_cols=213 Identities=8% Similarity=-0.054 Sum_probs=111.5
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEe-CC-----CeEEEEECCCCeEEEEe----cCCC
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAG-FD-----YLIILWDVGKGEALTVI----DCHP 219 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s-~d-----~~v~iwd~~~~~~~~~~----~~h~ 219 (494)
.+.+||..+..- ..+..+.. ...-.+++..+++ ++++.|+ .+ ..+.+||+.+.+-...- ....
T Consensus 266 ~v~~yd~~t~~W-----~~~~~~~~-~R~~~s~~~~~dg-~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~ 338 (656)
T 1k3i_A 266 KTSLYDSSSDSW-----IPGPDMQV-ARGYQSSATMSDG-RVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPML 338 (656)
T ss_dssp CEEEEEGGGTEE-----EECCCCSS-CCSSCEEEECTTS-CEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGC
T ss_pred ceEEecCcCCce-----eECCCCCc-cccccceEEecCC-eEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccc
Confidence 589999876521 11111211 1112345566777 6888888 44 57999999887643320 0000
Q ss_pred CceEEEEEcCCCCEEEEEeCC---------CeEEEEeCCCCceEEEeeecCC--------CCceEEEEECCCCeEEEEEe
Q psy14130 220 DVINCLSFNRDGSRLVTTCKD---------KTVRVLDPRTGLVISQGVCHPG--------TRSSKAVFIGDTGRIVTTGF 282 (494)
Q Consensus 220 ~~v~~l~~~~~~~~l~s~~~d---------~~v~iwd~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~l~~~g~ 282 (494)
..-....+..++..++.++.+ ..+..||+.+.........+.. .....+.+...++++++.|
T Consensus 339 ~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~G- 417 (656)
T 1k3i_A 339 TADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFG- 417 (656)
T ss_dssp CCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEEC-
T ss_pred cccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEe-
Confidence 000001122345555555443 4578899988764433322211 1123444445457888887
Q ss_pred cCCCCc-----------eEEEEeCCCCCCceeE-eeecCCCceEEeEEeCCCCEEEEEEeCC-----------CcEEEEE
Q psy14130 283 SRHSDR-----------QVGLWDENDLNTPLAL-ETVDSSSGVLFPYYDHDTRILFLAGKGD-----------GNIRYYE 339 (494)
Q Consensus 283 ~~~~d~-----------~i~iwd~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~g~~d-----------g~i~~wd 339 (494)
+.++ .|.+||..+....... ........-..++..|+++.+ +.|+.+ ..+.+||
T Consensus 418 --G~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~-v~GG~~~~~~~~~~~~~~~v~~yd 494 (656)
T 1k3i_A 418 --GSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTF-ITGGQRRGIPFEDSTPVFTPEIYV 494 (656)
T ss_dssp --CBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEE-EECCBSBCCTTCCCSBCCCCEEEE
T ss_pred --CCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEE-EECCcccCcCcCCCCcccceEEEc
Confidence 4321 6788887653321111 011121222344566888877 676644 4689999
Q ss_pred eeCCCceEEecccccCCCC-eeEEEEecCCceeeecc
Q psy14130 340 LTNERPYIHFLNQSLSGAP-QRGLGFMPKRGCDVTQC 375 (494)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~-v~~~~~~p~~~~~~~~~ 375 (494)
..+.+- ..+........ .....+.|++.+++.+.
T Consensus 495 p~t~~W--~~~~~~~~~R~~hs~a~ll~dg~v~v~GG 529 (656)
T 1k3i_A 495 PEQDTF--YKQNPNSIVRVYHSISLLLPDGRVFNGGG 529 (656)
T ss_dssp GGGTEE--EECCCCSSCCCTTEEEEECTTSCEEEEEC
T ss_pred CCCCce--eecCCCCCccccccHhhcCCCcEEEecCC
Confidence 988652 23333222222 23455678999888864
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=98.01 E-value=0.023 Score=59.91 Aligned_cols=194 Identities=11% Similarity=0.013 Sum_probs=121.1
Q ss_pred cccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecC--------CCCceEEEEEcCCCCEEEEEeCCCeEEEEe
Q psy14130 176 KRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDC--------HPDVINCLSFNRDGSRLVTTCKDKTVRVLD 247 (494)
Q Consensus 176 ~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~--------h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd 247 (494)
...|.++...++| + |-.|+.++-|..||..+++....... ....|.++...++|++|..|+.++-|..||
T Consensus 356 ~~~V~~i~~d~~g-~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d 433 (795)
T 4a2l_A 356 DNVVSCIVEDKDK-N-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILH 433 (795)
T ss_dssp CSSEEEEEECTTS-C-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEE
T ss_pred CCeeEEEEECCCC-C-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEe
Confidence 4569999999887 3 55577777899999887654332211 236799999998998677788878899999
Q ss_pred CCCCceEEEeee---cCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee-----cCCCceEEeEEe
Q psy14130 248 PRTGLVISQGVC---HPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV-----DSSSGVLFPYYD 319 (494)
Q Consensus 248 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~-----~~~~~v~~~~~~ 319 (494)
..+++...-... .....+.++...++ +.+.++. . +-+.+||..+... ...... -....|.++..+
T Consensus 434 ~~~~~~~~~~~~~~~l~~~~v~~i~~d~~-g~lwigt----~-~Gl~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~i~~d 506 (795)
T 4a2l_A 434 RNSGQVENFNQRNSQLVNENVYAILPDGE-GNLWLGT----L-SALVRFNPEQRSF-TTIEKEKDGTPVVSKQITTLFRD 506 (795)
T ss_dssp TTTCCEEEECTTTSCCSCSCEEEEEECSS-SCEEEEE----S-SCEEEEETTTTEE-EECCBCTTCCBCCCCCEEEEEEC
T ss_pred CCCCcEEEeecCCCCcCCCeeEEEEECCC-CCEEEEe----c-CceeEEeCCCCeE-EEccccccccccCCceEEEEEEC
Confidence 988764332110 11222566665555 5666655 3 4588899765321 111100 022568888899
Q ss_pred CCCCEEEEEEeCCCcEEEEEeeCCCceEEecc----cccCCCCeeEEEEecCCceeeeccceeEEEEe
Q psy14130 320 HDTRILFLAGKGDGNIRYYELTNERPYIHFLN----QSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKL 383 (494)
Q Consensus 320 ~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~----~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l 383 (494)
++|... +.. . +-|..||..+++. .+.. .......|.++...++|.+.++..+-+..|+.
T Consensus 507 ~~g~lW-igt-~-~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~Gl~~~d~ 569 (795)
T 4a2l_A 507 SHKRLW-IGG-E-EGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIWVGTREGFYCFNE 569 (795)
T ss_dssp TTCCEE-EEE-S-SCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEESSCEEEEET
T ss_pred CCCCEE-EEe-C-CceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeCCCceeECC
Confidence 998876 433 3 4588899887653 2211 11123568888888888766655434444443
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=97.97 E-value=0.00011 Score=75.97 Aligned_cols=182 Identities=9% Similarity=0.080 Sum_probs=112.2
Q ss_pred CCeEEEEECCCCeEEEEecCCC---C----------------------------ceEEEEEcCCCCEEEEEeCCC-----
Q psy14130 198 DYLIILWDVGKGEALTVIDCHP---D----------------------------VINCLSFNRDGSRLVTTCKDK----- 241 (494)
Q Consensus 198 d~~v~iwd~~~~~~~~~~~~h~---~----------------------------~v~~l~~~~~~~~l~s~~~d~----- 241 (494)
++.|..+|..+|+.+..+.... . ....++++++..+++.++.++
T Consensus 177 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~ 256 (668)
T 1kv9_A 177 RGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNR 256 (668)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCcccc
Confidence 5899999999999988775210 0 112468888888888888776
Q ss_pred --------------eEEEEeCCCCceEEEeee--cCC------CCceEEEEECCCC--eEEEEEecCCCCceEEEEeCCC
Q psy14130 242 --------------TVRVLDPRTGLVISQGVC--HPG------TRSSKAVFIGDTG--RIVTTGFSRHSDRQVGLWDEND 297 (494)
Q Consensus 242 --------------~v~iwd~~~~~~~~~~~~--~~~------~~~~~~~~~~~~~--~l~~~g~~~~~d~~i~iwd~~~ 297 (494)
.|..+|+++|+.+-.+.. |.. ..........++. .+++.+ +.+|.++++|.++
T Consensus 257 ~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~---~~~G~l~~lD~~t 333 (668)
T 1kv9_A 257 EVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQA---PKNGFFYVLDRTN 333 (668)
T ss_dssp HHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEEC---CTTSEEEEEETTT
T ss_pred CCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEE---CCCCEEEEEECCC
Confidence 399999999998877754 221 1011111222322 256666 6899999999888
Q ss_pred CCCceeEe--------eec--CC------------------------CceEEeEEeCCCCEEEEEE--------------
Q psy14130 298 LNTPLALE--------TVD--SS------------------------SGVLFPYYDHDTRILFLAG-------------- 329 (494)
Q Consensus 298 ~~~~~~~~--------~~~--~~------------------------~~v~~~~~~~~~~~l~~~g-------------- 329 (494)
++...... .++ .. .....++++|+...+|+..
T Consensus 334 G~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~ 413 (668)
T 1kv9_A 334 GKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDF 413 (668)
T ss_dssp CCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGC
T ss_pred CCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeecccc
Confidence 65431111 000 00 0011268899988887632
Q ss_pred ---------------------eCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeee--ccceeEEEEeeCC
Q psy14130 330 ---------------------KGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVT--QCEIFRFFKLHTT 386 (494)
Q Consensus 330 ---------------------~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~--~~~~~~~~~l~~~ 386 (494)
..+|.|..||+.+++...+... ..+..+..+...+.++.. .++.++.|+..++
T Consensus 414 ~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~----~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG 489 (668)
T 1kv9_A 414 VTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPY----PTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKG 489 (668)
T ss_dssp CCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEE----SSSCCCCEEEETTTEEEEECTTSEEEEEETTTC
T ss_pred ccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccC----CCCCcCceeEeCCCEEEEECCcccchhhhhhcC
Confidence 1348899999999986544322 233444444444443333 3788888887763
|
| >3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A* | Back alignment and structure |
|---|
Probab=97.95 E-value=0.004 Score=63.45 Aligned_cols=221 Identities=10% Similarity=-0.022 Sum_probs=130.1
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeE-EEEecCCCCceEEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEA-LTVIDCHPDVINCLSF 227 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~-~~~~~~h~~~v~~l~~ 227 (494)
+.|+..++..... ....+...-..+..++|++.+..++++-...+.|..+++..... ...+...-.....+++
T Consensus 18 ~~I~~i~~~~~~~------~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAv 91 (619)
T 3s94_A 18 RDLRLVDATNGKE------NATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLAC 91 (619)
T ss_dssp SBEEEECCC---------------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEE
T ss_pred ccEEEEeCCCCcc------eEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEE
Confidence 3588888765421 01112223345789999997645555655678899999875532 2333333357889999
Q ss_pred cCCCCEEE-EEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEee
Q psy14130 228 NRDGSRLV-TTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALET 306 (494)
Q Consensus 228 ~~~~~~l~-s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~ 306 (494)
++.+..|+ +-...+.|.+.++.... ...+..........+++.|.++.++.+.+ ...+.|...++..... ..+..
T Consensus 92 D~~~~~ly~~d~~~~~I~v~~~dG~~-~~~l~~~~l~~P~~Iavdp~~g~ly~tD~--g~~~~I~r~~~dG~~~-~~l~~ 167 (619)
T 3s94_A 92 DWLGEKLYWTDSETNRIEVSNLDGSL-RKVLFWQELDQPRAIALDPSSGFMYWTDW--GEVPKIERAGMDGSSR-FIIIN 167 (619)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSSCSCCCCEEEETTTTEEEEEEC--SSSCEEEEEETTSCSC-EEEEC
T ss_pred EecCCEEEEEeCCCCEEEEEECCCCC-EEEEEeCCCCCCceEEEecCCCeEEEecc--CCCCEEEEEECCCCce-EEEEe
Confidence 99655555 44567899999987543 33333222233788999998888988874 2346777777764322 22221
Q ss_pred ecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccceeEEEEee
Q psy14130 307 VDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLH 384 (494)
Q Consensus 307 ~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~ 384 (494)
........++++++++.||++-...+.|..+|+..... ..+... . .....++++..+ .+.++.-..-+|+.++
T Consensus 168 -~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~-~~~~~~-~-~~~P~gi~~~~~-~ly~td~~~~~V~~~d 240 (619)
T 3s94_A 168 -SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNR-QAVVKG-S-LPHPFALTLFED-ILYWTDWSTHSILACN 240 (619)
T ss_dssp -SSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEE-C-----------CCCEEESSS-EEEEECTTTCSEEEEE
T ss_pred -CCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCcc-EEEEeC-C-CCCceEEEEeCC-EEEEecCCCCEEEEEE
Confidence 23356788999999999989988888999999876433 222221 1 122357788766 5555643333344433
|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
Probab=97.91 E-value=0.014 Score=53.99 Aligned_cols=196 Identities=6% Similarity=-0.141 Sum_probs=123.4
Q ss_pred CcEEEEEEc--CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecC
Q psy14130 140 GGAFLVLPI--HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDC 217 (494)
Q Consensus 140 ~g~~~~~~~--~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~ 217 (494)
++.+..+.. +.|..++....... ...+...-.....+++.+.+.+++++-...+.|.+.++........+..
T Consensus 46 ~~~lyw~D~~~~~I~r~~~~g~~~~------~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~ 119 (318)
T 3sov_A 46 HGLIYWSDVSEEAIKRTEFNKTESV------QNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQ 119 (318)
T ss_dssp GTEEEEEETTTTEEEEEETTSSSCC------CEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS
T ss_pred CCEEEEEECCCCcEEEEEccCCCce------EEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeC
Confidence 344555443 34667776554211 1111112234567888876546777777778999999865433333334
Q ss_pred CCCceEEEEEcCCCCEEEEEeC--CCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeC
Q psy14130 218 HPDVINCLSFNRDGSRLVTTCK--DKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDE 295 (494)
Q Consensus 218 h~~~v~~l~~~~~~~~l~s~~~--d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~ 295 (494)
.......++++|.+..|+.+.. .+.|...++.... ...+....-.....+++.+++++++.+- ...+.|..+|+
T Consensus 120 ~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~~~~~l~~Pnglavd~~~~~lY~aD---~~~~~I~~~d~ 195 (318)
T 3sov_A 120 ELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS-RFIIINSEIYWPNGLTLDYEEQKLYWAD---AKLNFIHKSNL 195 (318)
T ss_dssp SCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS-CEEEECSSCSCEEEEEEETTTTEEEEEE---TTTTEEEEEET
T ss_pred CCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC-eEEEEECCCCCccEEEEeccCCEEEEEE---CCCCEEEEEcC
Confidence 4567789999997666666553 5788888886433 3333222222368999999889999988 78899999998
Q ss_pred CCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEe
Q psy14130 296 NDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHF 349 (494)
Q Consensus 296 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~ 349 (494)
..... ..+.. ........+++. +..+|.+-...+.|..++..+++....+
T Consensus 196 dG~~~-~~~~~-~~~~~P~glav~--~~~lywtd~~~~~V~~~~~~~G~~~~~i 245 (318)
T 3sov_A 196 DGTNR-QAVVK-GSLPHPFALTLF--EDILYWTDWSTHSILACNKYTGEGLREI 245 (318)
T ss_dssp TSCSC-EEEEC-SCCSCEEEEEEE--TTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred CCCce-EEEec-CCCCCceEEEEe--CCEEEEEecCCCeEEEEECCCCCceEEE
Confidence 75332 22221 123445566664 4567788878889999999887764444
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=97.91 E-value=0.00099 Score=68.74 Aligned_cols=226 Identities=12% Similarity=0.028 Sum_probs=121.2
Q ss_pred cEEEEEcCCCCCCCCcccceEec-ccccccEEEEEEcCCCCCEEEEEeC-CCeEEEEECCCCeEEEEecCCCC-ceEEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDL-HGHKRRVGYIEWHPTAENVVASAGF-DYLIILWDVGKGEALTVIDCHPD-VINCLS 226 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~-~~h~~~V~~~~~~p~~~~~l~s~s~-d~~v~iwd~~~~~~~~~~~~h~~-~v~~l~ 226 (494)
.+.+||..++.-. .+..+ ..+.....++++..++ .+++.|+. +..+.+||+.+.+-...-..+.. .-.+++
T Consensus 220 ~~~~yd~~t~~w~-----~~~~~~~~~~~~~~~~~~~~~g-~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~ 293 (656)
T 1k3i_A 220 LTSSWDPSTGIVS-----DRTVTVTKHDMFCPGISMDGNG-QIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSA 293 (656)
T ss_dssp EEEEECTTTCCBC-----CCEEEECSCCCSSCEEEECTTS-CEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEE
T ss_pred EEEEEeCCCCcEE-----eCcccCCCCCCccccccCCCCC-CEEEeCCCCCCceEEecCcCCceeECCCCCccccccceE
Confidence 4788998877431 22222 1233333456778887 68888884 45899999987754332111111 123556
Q ss_pred EcCCCCEEEEEe-CC-----CeEEEEeCCCCceEEE-----eeecCCCCceEEEEECCCCeEEEEEecC------CCCce
Q psy14130 227 FNRDGSRLVTTC-KD-----KTVRVLDPRTGLVISQ-----GVCHPGTRSSKAVFIGDTGRIVTTGFSR------HSDRQ 289 (494)
Q Consensus 227 ~~~~~~~l~s~~-~d-----~~v~iwd~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~g~~~------~~d~~ 289 (494)
..++|++++.|+ .+ ..+.+||+.+++-... ....... . ..++..+ +++++.|... .....
T Consensus 294 ~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~-~-~~~~~~~-~~iyv~Gg~~g~~~~~~~~~~ 370 (656)
T 1k3i_A 294 TMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTAD-K-QGLYRSD-NHAWLFGWKKGSVFQAGPSTA 370 (656)
T ss_dssp ECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCC-T-TGGGTTT-CSCCEEECGGGCEEECCSSSE
T ss_pred EecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccc-c-cceeecC-CceEEEECCCCcEEEecCccc
Confidence 677899999988 34 5799999988763321 0000000 0 0111122 3444444100 12346
Q ss_pred EEEEeCCCCCCceeEeeecC-------CCceEEeEEeCCCCEEEEEEeCCC-----------cEEEEEeeCCCceEEec-
Q psy14130 290 VGLWDENDLNTPLALETVDS-------SSGVLFPYYDHDTRILFLAGKGDG-----------NIRYYELTNERPYIHFL- 350 (494)
Q Consensus 290 i~iwd~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~g~~dg-----------~i~~wd~~~~~~~~~~~- 350 (494)
+..||..+............ ...-.++.|...+..|++.|+.++ .|.+||..+.+-. ...
T Consensus 371 v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~-~~~~ 449 (656)
T 1k3i_A 371 MNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNT-VFAS 449 (656)
T ss_dssp EEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEE-EECT
T ss_pred eeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCee-EEcc
Confidence 78888876432111111100 112234455554555668887543 5778887766532 211
Q ss_pred ccccCCCCeeEEEEecCCceeeecc-------------ceeEEEEeeC
Q psy14130 351 NQSLSGAPQRGLGFMPKRGCDVTQC-------------EIFRFFKLHT 385 (494)
Q Consensus 351 ~~~~~~~~v~~~~~~p~~~~~~~~~-------------~~~~~~~l~~ 385 (494)
........-.+.+..|++.+++.+. ..+.+|+..+
T Consensus 450 ~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t 497 (656)
T 1k3i_A 450 NGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQ 497 (656)
T ss_dssp TCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGG
T ss_pred CCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCC
Confidence 1222222334567788998888763 3467888766
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=97.91 E-value=2.3e-05 Score=81.19 Aligned_cols=199 Identities=14% Similarity=-0.020 Sum_probs=117.1
Q ss_pred ccEEEEEEcCCCCCEEEEEeCCCeEEEEECCC----CeEEEEecCCCCceEEEEEcCC-CCEEEEEeCCCeEEEEeCCCC
Q psy14130 177 RRVGYIEWHPTAENVVASAGFDYLIILWDVGK----GEALTVIDCHPDVINCLSFNRD-GSRLVTTCKDKTVRVLDPRTG 251 (494)
Q Consensus 177 ~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~----~~~~~~~~~h~~~v~~l~~~~~-~~~l~s~~~d~~v~iwd~~~~ 251 (494)
..+..|+|++.+..++++-...+.|+.+++.. ......+.........|++.+. ++++++-...+.|.++++...
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~ 485 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 485 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSC
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCC
Confidence 34568899987644555555668899999875 2222222222234567888864 445555556788999998755
Q ss_pred ceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCC-ceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEe
Q psy14130 252 LVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSD-RQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGK 330 (494)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d-~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~ 330 (494)
.. ..+..........+++.|.++.|+.+. ... +.|.++++....... +. .........++++|++..||++-.
T Consensus 486 ~~-~~l~~~~~~~P~giavDp~~g~ly~td---~~~~~~I~~~~~dG~~~~~-l~-~~~l~~PnGlavd~~~~~LY~aD~ 559 (699)
T 1n7d_A 486 KR-KTLFREQGSKPRAIVVDPVHGFMYWTD---WGTPAKIKKGGLNGVDIYS-LV-TENIQWPNGITLDLLSGRLYWVDS 559 (699)
T ss_dssp CE-EEECCCSSCCCCCEECCSSSSCCEECC---CSSSCCEEBCCSSSCCCCE-ES-CSSCSSCCCEEECTTTCCEEEEET
T ss_pred ce-EEEEeCCCCCcceEEEccCCCcEEEcc---cCCCCeEEEEeCCCCCeeE-EE-eCCCCCccEEEEeccCCEEEEEec
Confidence 43 333222222367788888778888776 233 678888776432211 11 112244667899999888889888
Q ss_pred CCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccceeEEEEe
Q psy14130 331 GDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKL 383 (494)
Q Consensus 331 ~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l 383 (494)
..+.|..+++..... ..++..........+|++..+ .++++.-+.-+|+.+
T Consensus 560 ~~~~I~~~d~dG~~~-~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~ 610 (699)
T 1n7d_A 560 KLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSA 610 (699)
T ss_dssp TTTEEEEECSSSSCC-EEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEE
T ss_pred CCCeEEEEccCCCce-EEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEE
Confidence 888999999875432 333322111223456777665 444444333334433
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=97.85 E-value=0.0031 Score=63.71 Aligned_cols=146 Identities=12% Similarity=0.065 Sum_probs=92.2
Q ss_pred eEEEEECCCCeEEEEecC--CC--------CceEEEEEcCCCC---EEEEEeCCCeEEEEeCCCCceEEEeeecCC----
Q psy14130 200 LIILWDVGKGEALTVIDC--HP--------DVINCLSFNRDGS---RLVTTCKDKTVRVLDPRTGLVISQGVCHPG---- 262 (494)
Q Consensus 200 ~v~iwd~~~~~~~~~~~~--h~--------~~v~~l~~~~~~~---~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~---- 262 (494)
.|..+|..+|+.+..++. |. .++. +....+|+ .++.++.+|.+.++|..+|+.+........
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~ 351 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVF 351 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSE
T ss_pred EEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCcccc
Confidence 699999999998887753 21 1221 22224674 577889999999999999998766543220
Q ss_pred --------CC--------------------------ceEEEEECCCCeEEEEEec-------------------------
Q psy14130 263 --------TR--------------------------SSKAVFIGDTGRIVTTGFS------------------------- 283 (494)
Q Consensus 263 --------~~--------------------------~~~~~~~~~~~~l~~~g~~------------------------- 283 (494)
.. -..+++.|+.+.+++....
T Consensus 352 ~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~ 431 (571)
T 2ad6_A 352 KKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAM 431 (571)
T ss_dssp EEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEE
T ss_pred ccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCcccccccee
Confidence 00 0235677776666554310
Q ss_pred -----C---CCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEec
Q psy14130 284 -----R---HSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFL 350 (494)
Q Consensus 284 -----~---~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~ 350 (494)
. ..++.|..||+.+++..-.... ...+........+..+|+ ++.||.|+.||.++++.+.++.
T Consensus 432 ~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~---~~~~~~~~~~t~gg~v~~-g~~dg~l~a~D~~tG~~lw~~~ 502 (571)
T 2ad6_A 432 YPGPNGPTKKEMGQIRAFDLTTGKAKWTKWE---KFAAWGGTLYTKGGLVWY-ATLDGYLKALDNKDGKELWNFK 502 (571)
T ss_dssp EECTTSTTSCCCEEEEEECTTTCCEEEEEEE---SSCCCSBCEEETTTEEEE-ECTTSEEEEEETTTCCEEEEEE
T ss_pred ccCccccCCCCCCeEEEEECCCCCEEEEecC---CCCccceeEEECCCEEEE-EcCCCeEEEEECCCCCEEEEEe
Confidence 0 1357899999987665333321 122222223334566644 7899999999999999865553
|
| >2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} | Back alignment and structure |
|---|
Probab=97.84 E-value=0.0028 Score=58.04 Aligned_cols=158 Identities=9% Similarity=-0.000 Sum_probs=100.6
Q ss_pred EEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEE-ecC----CC--CceEEEEE---cCCCCEEEEEe----------
Q psy14130 179 VGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTV-IDC----HP--DVINCLSF---NRDGSRLVTTC---------- 238 (494)
Q Consensus 179 V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~-~~~----h~--~~v~~l~~---~~~~~~l~s~~---------- 238 (494)
-.+++|++....++++.-..++|..||...+..... +.+ .. ..+..|.| .|+++++++..
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~ 94 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQ 94 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSC
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccc
Confidence 357899886645555555899999999976643333 322 11 14679999 68888777544
Q ss_pred ---CCCeEEEEeCC---CCceEEEeee--c----------CCCCceEEEEECCCCeEEEEEecCCCC-ceEEEEeCCCCC
Q psy14130 239 ---KDKTVRVLDPR---TGLVISQGVC--H----------PGTRSSKAVFIGDTGRIVTTGFSRHSD-RQVGLWDENDLN 299 (494)
Q Consensus 239 ---~d~~v~iwd~~---~~~~~~~~~~--~----------~~~~~~~~~~~~~~~~l~~~g~~~~~d-~~i~iwd~~~~~ 299 (494)
.+..|..||+. +++.+..... . .......++..+++ ..++++ +.. +.|...+....
T Consensus 95 ~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~G-naYVt~---s~~~~~I~rV~pdG~- 169 (334)
T 2p9w_A 95 SSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDG-NSYVAF---ALGMPAIARVSADGK- 169 (334)
T ss_dssp CSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTS-CEEEEE---EESSCEEEEECTTSC-
T ss_pred ccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCC-CEEEeC---CCCCCeEEEEeCCCC-
Confidence 26889999999 7775544431 1 11125778888874 455544 244 66666665532
Q ss_pred CceeEee----ecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeC
Q psy14130 300 TPLALET----VDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTN 342 (494)
Q Consensus 300 ~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~ 342 (494)
....... .....+...++++|++..|++..+ +|.|..+|+..
T Consensus 170 ~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~ 215 (334)
T 2p9w_A 170 TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSK 215 (334)
T ss_dssp CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSS
T ss_pred EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCC
Confidence 2111111 011234668899999999977766 99999999884
|
| >3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.84 E-value=0.038 Score=58.14 Aligned_cols=220 Identities=10% Similarity=-0.034 Sum_probs=126.9
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEec--CCCCceEEE
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVID--CHPDVINCL 225 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~--~h~~~v~~l 225 (494)
.+-|..|+..++.... + ...-......|.++...+++ . |..|+.++-+..+|..+++...... .....|.++
T Consensus 382 ~~Gl~~~~~~~~~~~~-~---~~~~~~~~~~v~~i~~d~~g-~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i 455 (781)
T 3v9f_A 382 GGGINVFENGKRVAIY-N---KENRELLSNSVLCSLKDSEG-N-LWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVF 455 (781)
T ss_dssp SSCEEEEETTEEEEEC-C--------CCCSBEEEEEECTTS-C-EEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEE
T ss_pred CCcEEEEECCCCeEEE-c---cCCCCCCCcceEEEEECCCC-C-EEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEE
Confidence 3457888865431100 0 00001234679999988887 4 4446776779999987775433221 234679999
Q ss_pred EEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeec----CCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCc
Q psy14130 226 SFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCH----PGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTP 301 (494)
Q Consensus 226 ~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~ 301 (494)
...++|.+.+ |+. +-|..||..+++........ ....+..+...++ +.+.++. .++-|..||..+.. .
T Consensus 456 ~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~-g~lWigt----~~~Gl~~~~~~~~~-~ 527 (781)
T 3v9f_A 456 YEDKNKKIWI-GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSE-GRFWIGT----FGGGVGIYTPDMQL-V 527 (781)
T ss_dssp EECTTSEEEE-EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTT-CCEEEEE----SSSCEEEECTTCCE-E
T ss_pred EECCCCCEEE-EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCC-CCEEEEE----cCCCEEEEeCCCCe-E
Confidence 9988886554 445 56889999877643322111 0122566665555 5565555 33447778876432 1
Q ss_pred eeEeeec--CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecc-cccCCCCeeEEEEecCCceeeecccee
Q psy14130 302 LALETVD--SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLN-QSLSGAPQRGLGFMPKRGCDVTQCEIF 378 (494)
Q Consensus 302 ~~~~~~~--~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~-~~~~~~~v~~~~~~p~~~~~~~~~~~~ 378 (494)
....... ....|.++..+++|... ++. .+|.|..||..+++. ..+.. .-.....|.++...++|.+.++...-+
T Consensus 528 ~~~~~~~~l~~~~i~~i~~d~~g~lW-i~T-~~Glv~~~d~~~~~~-~~~~~~~gl~~~~i~~i~~d~~g~lW~~t~~Gl 604 (781)
T 3v9f_A 528 RKFNQYEGFCSNTINQIYRSSKGQMW-LAT-GEGLVCFPSARNFDY-QVFQRKEGLPNTHIRAISEDKNGNIWASTNTGI 604 (781)
T ss_dssp EEECTTTTCSCSCEEEEEECTTSCEE-EEE-TTEEEEESCTTTCCC-EEECGGGTCSCCCCCEEEECSSSCEEEECSSCE
T ss_pred EEccCCCCCCCCeeEEEEECCCCCEE-EEE-CCCceEEECCCCCcE-EEccccCCCCCceEEEEEECCCCCEEEEcCCce
Confidence 1111000 13467888888988866 433 466558888877653 22221 111234688888888888777764444
Q ss_pred EEEEee
Q psy14130 379 RFFKLH 384 (494)
Q Consensus 379 ~~~~l~ 384 (494)
..++..
T Consensus 605 ~~~~~~ 610 (781)
T 3v9f_A 605 SCYITS 610 (781)
T ss_dssp EEEETT
T ss_pred EEEECC
Confidence 445443
|
| >3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A* | Back alignment and structure |
|---|
Probab=97.84 E-value=0.031 Score=56.90 Aligned_cols=229 Identities=9% Similarity=-0.003 Sum_probs=140.5
Q ss_pred EEEEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCce
Q psy14130 143 FLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVI 222 (494)
Q Consensus 143 ~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v 222 (494)
+++...+.|+..++...... .....+. .-..+.+++|.+.++.++++-...+.|+.+++........+...-...
T Consensus 320 Ll~~~~~~i~~i~l~~~~~~----~~~~~~~-~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p 394 (619)
T 3s94_A 320 LLLARRTDLRRISLDTPDFT----DIVLQLE-DIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHP 394 (619)
T ss_dssp EEEEESSCEEEEESSSTTCC----CEECCCS-CCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCC
T ss_pred EEEEcccceEEEecCCCccc----eeEEecc-ccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCc
Confidence 44445556777777654321 1111111 224577899998654566666667899999987544333344334567
Q ss_pred EEEEEcCCCC-EEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCc
Q psy14130 223 NCLSFNRDGS-RLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTP 301 (494)
Q Consensus 223 ~~l~~~~~~~-~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~ 301 (494)
.++++++.+. +.++-+..+.|.+.++.... ...+....-.....++..|..+.++.+.+ .....|...++.....
T Consensus 395 ~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~-~~~l~~~~l~~P~~iavdp~~G~ly~tD~--g~~~~I~r~~~dG~~~- 470 (619)
T 3s94_A 395 DGIAVDWVARNLYWTDTGTDRIEVTRLNGTM-RKILISEDLEEPRAIVLDPMVGYMYWTDW--GEIPKIERAALDGSDR- 470 (619)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECTTCCSEEEEEEETTTTEEEEEEC--SSSCEEEEEETTSCSC-
T ss_pred CceEEecccCcEEEEeCCCCcEEEEeCCCCe-EEEEEECCCCCeeeEEEEcCCCcEEEecC--CCCCEEEEEccCCCcc-
Confidence 8999997554 55555567899999987543 33343333334789999998788888873 2246777777764322
Q ss_pred eeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccceeEEE
Q psy14130 302 LALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFF 381 (494)
Q Consensus 302 ~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~ 381 (494)
..+. ...-.....++++++++.||++-+..+.|..+++..... ..++.. ......+++...+ .+.++.-..-+|+
T Consensus 471 ~~l~-~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~~~-~~~~~~--~l~~P~glav~~~-~ly~tD~~~~~I~ 545 (619)
T 3s94_A 471 VVLV-NTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGR-RVLVED--KIPHIFGFTLLGD-YVYWTDWQRRSIE 545 (619)
T ss_dssp EEEE-CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC-EEEEEC--CCCSSCCEEEETT-EEEEECTTSSCEE
T ss_pred EEEE-eCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCCce-EEEecc--CCCCcEEEEEECC-EEEEeecCCCeEE
Confidence 2221 123356778999999999989888888899999865443 222221 1122356777655 5666654444455
Q ss_pred EeeC
Q psy14130 382 KLHT 385 (494)
Q Consensus 382 ~l~~ 385 (494)
.++.
T Consensus 546 ~~~k 549 (619)
T 3s94_A 546 RVHK 549 (619)
T ss_dssp EEES
T ss_pred EEEc
Confidence 5443
|
| >3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A | Back alignment and structure |
|---|
Probab=97.82 E-value=0.0064 Score=56.20 Aligned_cols=175 Identities=11% Similarity=0.206 Sum_probs=109.1
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCC----CCC--E-EEEEeC--CCeEEEEEC--CCCeEEEEecC-
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPT----AEN--V-VASAGF--DYLIILWDV--GKGEALTVIDC- 217 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~----~~~--~-l~s~s~--d~~v~iwd~--~~~~~~~~~~~- 217 (494)
.+.+||+ ++ +.++.+.. +.++.+..-|. |.. + +++.-. +.+|.++++ .++. +..+..
T Consensus 51 gL~Vydl-~G-------~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i~~~ 119 (355)
T 3amr_A 51 GLVVYSL-DG-------KMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSMTDP 119 (355)
T ss_dssp EEEEEET-TS-------CEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEECSCT
T ss_pred CEEEEcC-CC-------cEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeecccc
Confidence 4899999 56 44455543 45666666552 211 2 333333 578999976 3443 544421
Q ss_pred -----CC-CceEEEEE--cCC-CC-EEEEEeCCCeEEEEeCC-------CCceEEEeeecCCCCceEEEEECCCCeEEEE
Q psy14130 218 -----HP-DVINCLSF--NRD-GS-RLVTTCKDKTVRVLDPR-------TGLVISQGVCHPGTRSSKAVFIGDTGRIVTT 280 (494)
Q Consensus 218 -----h~-~~v~~l~~--~~~-~~-~l~s~~~d~~v~iwd~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 280 (494)
.. ..+..+++ +|. +. +++...++|.+..|++. +.+.++++.... .+-.|+..+..+.|++.
T Consensus 120 ~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgs--q~EgcvvDd~~g~Lyv~ 197 (355)
T 3amr_A 120 DHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNS--QTEGMAADDEYGRLYIA 197 (355)
T ss_dssp TSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSS--CEEEEEEETTTTEEEEE
T ss_pred ccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCC--CcceEEEcCCCCeEEEe
Confidence 11 56777888 774 44 67888889999999883 234667766543 37888888887777777
Q ss_pred EecCCCCceEEEEeCCCC--CCceeEeeecCC---CceEEeEE--eCCCC-EEEEEEeCCCcEEEEEee
Q psy14130 281 GFSRHSDRQVGLWDENDL--NTPLALETVDSS---SGVLFPYY--DHDTR-ILFLAGKGDGNIRYYELT 341 (494)
Q Consensus 281 g~~~~~d~~i~iwd~~~~--~~~~~~~~~~~~---~~v~~~~~--~~~~~-~l~~~g~~dg~i~~wd~~ 341 (494)
- ++.-|..+|.+.. .....+...... ..+..+++ .++++ +|++++-+++++.+||.+
T Consensus 198 e----Ed~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 198 E----EDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp E----TTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred c----ccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 6 6666777775422 122223222211 34555555 56666 787777788999999997
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=97.81 E-value=0.0046 Score=64.76 Aligned_cols=184 Identities=8% Similarity=-0.043 Sum_probs=92.5
Q ss_pred cEEEEEcCCCCCCCCcccceEecc-cccccEEEEEEcCCCCCEEEEEe-C--CCeEEEEECCCC--eE-EEEe-cCCCCc
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLH-GHKRRVGYIEWHPTAENVVASAG-F--DYLIILWDVGKG--EA-LTVI-DCHPDV 221 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~-~h~~~V~~~~~~p~~~~~l~s~s-~--d~~v~iwd~~~~--~~-~~~~-~~h~~~ 221 (494)
+|.++++.++.. +....+. .+......+.|+|+|. .|+..+ . ...|.++|+.++ +. +..+ ....+.
T Consensus 248 ~v~~~~lgt~~~-----~~~lv~~~~~~~~~~~~~~SpDg~-~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~ 321 (751)
T 2xe4_A 248 KVWRHVMGKLQS-----EDVCLYEEHNPLFSAFMYKAADTN-TLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGV 321 (751)
T ss_dssp EEEEEETTSCGG-----GCEEEEECCCTTCEEEEEECTTSS-EEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTC
T ss_pred EEEEEECCCCch-----hcEEEEecCCCceEEEEEECCCCC-EEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCc
Confidence 467777765521 1111211 2234467889999995 554443 2 346888999875 22 1333 334556
Q ss_pred eEEEEEcCCCCEEEEEeCC----CeEEEEeCCCCceEEE-eeecCCCCceEEEEECCCCeEEEEEecCCCCce--EEEEe
Q psy14130 222 INCLSFNRDGSRLVTTCKD----KTVRVLDPRTGLVISQ-GVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQ--VGLWD 294 (494)
Q Consensus 222 v~~l~~~~~~~~l~s~~~d----~~v~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~--i~iwd 294 (494)
..++.|+.++.+++.+..+ ..|..+|+.++..... +..+... ..-..+...++.++++. ..++. |.++|
T Consensus 322 ~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~-~~l~~~~~~~~~lv~~~---~~~g~~~l~~~d 397 (751)
T 2xe4_A 322 RYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSED-VFMESIAVRSNYLVVAG---RRAGLTRIWTMM 397 (751)
T ss_dssp CEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSS-EEEEEEEECSSEEEEEE---EETTEEEEEEEE
T ss_pred eEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCC-cEEEEEEEECCEEEEEE---EeCCEEEEEEEe
Confidence 6777766544444554443 3677778765322222 3333322 22222333456777776 45664 55666
Q ss_pred C-------CCCCCceeEeeecCCCceEEeEE----eCCCCEEEEEEeCC---CcEEEEEeeCCC
Q psy14130 295 E-------NDLNTPLALETVDSSSGVLFPYY----DHDTRILFLAGKGD---GNIRYYELTNER 344 (494)
Q Consensus 295 ~-------~~~~~~~~~~~~~~~~~v~~~~~----~~~~~~l~~~g~~d---g~i~~wd~~~~~ 344 (494)
+ ........+ .++....+..+.+ ++++..++++.+.. ..+..+|+.+++
T Consensus 398 l~~~~~~~~~g~~~~~l-~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~ 460 (751)
T 2xe4_A 398 ADSQDGVFKAGTGLREV-VMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHS 460 (751)
T ss_dssp CCTTTSCCCTTTCCEEC-CCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCC
T ss_pred cccccccccCCccceEE-CCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 5 222101111 1222222333433 45666554554443 346667776665
|
| >2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=97.81 E-value=0.024 Score=53.34 Aligned_cols=203 Identities=8% Similarity=-0.023 Sum_probs=111.3
Q ss_pred cccEEEEEEcCC---CCCEEEEEeC-------CCeEEEEECCCC----eEEE-EecC------CCCceEEEEEcCCCCEE
Q psy14130 176 KRRVGYIEWHPT---AENVVASAGF-------DYLIILWDVGKG----EALT-VIDC------HPDVINCLSFNRDGSRL 234 (494)
Q Consensus 176 ~~~V~~~~~~p~---~~~~l~s~s~-------d~~v~iwd~~~~----~~~~-~~~~------h~~~v~~l~~~~~~~~l 234 (494)
......|+|+|+ +..+.++-+. ...|..+++..+ .... .+.. .......|+|.|||.++
T Consensus 65 ~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Ly 144 (353)
T 2g8s_A 65 QGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLF 144 (353)
T ss_dssp TCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEE
T ss_pred CCCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEE
Confidence 446789999995 3245554332 235666666533 1111 1211 11223579999999766
Q ss_pred EEEeC-------------CCeEEEEeCCCCc------------eEEEe-eecCCCCceEEEEECCCCeEEEEEecCCCCc
Q psy14130 235 VTTCK-------------DKTVRVLDPRTGL------------VISQG-VCHPGTRSSKAVFIGDTGRIVTTGFSRHSDR 288 (494)
Q Consensus 235 ~s~~~-------------d~~v~iwd~~~~~------------~~~~~-~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~ 288 (494)
++.+. .++|.-+|....- ....+ .++.. ...++|.+..+.|+++-. ..++
T Consensus 145 v~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rn--p~gl~~d~~~g~l~~~d~--g~~~ 220 (353)
T 2g8s_A 145 IALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRN--PQGMAMNPWSNALWLNEH--GPRG 220 (353)
T ss_dssp EEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSE--EEEEEEETTTTEEEEEEE--CSBS
T ss_pred EEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcC--ccceEEECCCCCEEEEec--CCCC
Confidence 66533 2467777765320 11111 23333 688999996678888763 1121
Q ss_pred eEEEEeCCCCCC----------------------------ceeEeeecCCCceEEeEEeC-------CCCEEEEEEeCCC
Q psy14130 289 QVGLWDENDLNT----------------------------PLALETVDSSSGVLFPYYDH-------DTRILFLAGKGDG 333 (494)
Q Consensus 289 ~i~iwd~~~~~~----------------------------~~~~~~~~~~~~v~~~~~~~-------~~~~l~~~g~~dg 333 (494)
.=.|.-+..... ........++..+..+.|.. ++.++ ++.-..+
T Consensus 221 ~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~-v~~~~~~ 299 (353)
T 2g8s_A 221 GDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLF-IGALKDK 299 (353)
T ss_dssp CEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEE-EEETTTT
T ss_pred CcEEeEeccCCcCCCCCccCCCCCCCCccCcccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEE-EEEccCC
Confidence 112222211100 00011122334566677754 34444 7776788
Q ss_pred cEEEEEeeCCCceEE--ecccccCCCCeeEEEEecCCceeeec-cceeEEEEeeC
Q psy14130 334 NIRYYELTNERPYIH--FLNQSLSGAPQRGLGFMPKRGCDVTQ-CEIFRFFKLHT 385 (494)
Q Consensus 334 ~i~~wd~~~~~~~~~--~~~~~~~~~~v~~~~~~p~~~~~~~~-~~~~~~~~l~~ 385 (494)
.|...++..++.... ++. .....+.++++.|||.+.++. ....+||++..
T Consensus 300 ~v~~~~~~~~~~~~~~~~~~--~~~~rp~~v~~~pdG~lyv~td~~~g~I~ri~~ 352 (353)
T 2g8s_A 300 DVIVMSVNGDKVTEDGRILT--DRGQRIRDVRTGPDGYLYVLTDESSGELLKVSP 352 (353)
T ss_dssp EEEEEEEETTEEEEEEEESG--GGCCCEEEEEECTTSCEEEEECSTTEEEEEEEC
T ss_pred EEEEEEeCCCeEeeeEEccc--CCCCceeEEEECCCCcEEEEEeCCCCEEEEEeC
Confidence 898888886543211 221 123578999999999988864 46788998763
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=97.77 E-value=0.0048 Score=62.38 Aligned_cols=181 Identities=15% Similarity=0.133 Sum_probs=106.1
Q ss_pred EEEcCCCCCEEEEEeCC----------------CeEEEEECCCCeEEEEecCCC----------CceEEEEEc-CCC---
Q psy14130 182 IEWHPTAENVVASAGFD----------------YLIILWDVGKGEALTVIDCHP----------DVINCLSFN-RDG--- 231 (494)
Q Consensus 182 ~~~~p~~~~~l~s~s~d----------------~~v~iwd~~~~~~~~~~~~h~----------~~v~~l~~~-~~~--- 231 (494)
+++.+.. .+++.++.+ +.|..+|..+|+.+..++... .++. +... .+|
T Consensus 246 ~a~d~~~-g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~ 323 (599)
T 1w6s_A 246 YAYDPGT-NLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKAR 323 (599)
T ss_dssp CEEETTT-TEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEE
T ss_pred eeEeCCC-CEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEE
Confidence 4555665 466666554 489999999999988776421 1121 2222 467
Q ss_pred CEEEEEeCCCeEEEEeCCCCceEEEeeecC------------CC--------------------------CceEEEEECC
Q psy14130 232 SRLVTTCKDKTVRVLDPRTGLVISQGVCHP------------GT--------------------------RSSKAVFIGD 273 (494)
Q Consensus 232 ~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~------------~~--------------------------~~~~~~~~~~ 273 (494)
..++.++.+|.+.++|.++|+.+....... +. ....+++.|+
T Consensus 324 ~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~ 403 (599)
T 1w6s_A 324 KLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPK 403 (599)
T ss_dssp EEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETT
T ss_pred EEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCC
Confidence 467788999999999999999876654221 00 0123556666
Q ss_pred CCeEEEEE---------------------------ec--CC------CCceEEEEeCCCCCCceeEeeecCCCceEEeEE
Q psy14130 274 TGRIVTTG---------------------------FS--RH------SDRQVGLWDENDLNTPLALETVDSSSGVLFPYY 318 (494)
Q Consensus 274 ~~~l~~~g---------------------------~~--~~------~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 318 (494)
.+.+++.. +. .+ ..+.|.-||+.+++..-.... ......-..
T Consensus 404 ~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~---~~~~~~g~~ 480 (599)
T 1w6s_A 404 RELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKME---RFAVWGGTM 480 (599)
T ss_dssp TTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEE---SSCCCSBCE
T ss_pred CCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecC---CCCccCcce
Confidence 55444321 00 01 347888899887654333221 111111112
Q ss_pred eCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCce
Q psy14130 319 DHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGC 370 (494)
Q Consensus 319 ~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 370 (494)
...+..+|+ |+.||.|+.||.++++.+.++... ......-+.+..+|..
T Consensus 481 ~tagg~vf~-gt~dg~l~A~D~~tG~~lW~~~l~--~g~~~~P~~y~~~G~q 529 (599)
T 1w6s_A 481 ATAGDLVFY-GTLDGYLKARDSDTGDLLWKFKIP--SGAIGYPMTYTHKGTQ 529 (599)
T ss_dssp EETTTEEEE-ECTTSEEEEEETTTCCEEEEEECS--SCCCSCCEEEEETTEE
T ss_pred EecCCEEEE-ECCCCeEEEEECCCCCEEEEeeCC--CCcEeccEEEEeCCEE
Confidence 235666744 789999999999999987665221 1111223445556653
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=97.76 E-value=0.0021 Score=64.84 Aligned_cols=182 Identities=11% Similarity=-0.005 Sum_probs=109.5
Q ss_pred CCeEEEEECCCCeEEEEecCCCCc-------------------------------------e-EEEEEcCCCCEEEEEeC
Q psy14130 198 DYLIILWDVGKGEALTVIDCHPDV-------------------------------------I-NCLSFNRDGSRLVTTCK 239 (494)
Q Consensus 198 d~~v~iwd~~~~~~~~~~~~h~~~-------------------------------------v-~~l~~~~~~~~l~s~~~ 239 (494)
++.|..+|..+|+.+.++...... + ..++++++...++.++.
T Consensus 175 ~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g 254 (571)
T 2ad6_A 175 RGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSG 254 (571)
T ss_dssp CCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECC
T ss_pred CCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECC
Confidence 799999999999988876532111 0 23567776667766653
Q ss_pred C----------------CeEEEEeCCCCceEEEeeecCC--------CCceEEEEECCCC--eEEEEEecCCCCceEEEE
Q psy14130 240 D----------------KTVRVLDPRTGLVISQGVCHPG--------TRSSKAVFIGDTG--RIVTTGFSRHSDRQVGLW 293 (494)
Q Consensus 240 d----------------~~v~iwd~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~--~l~~~g~~~~~d~~i~iw 293 (494)
+ +.|..+|.++|+.+-.+..... .....+....++. .+++.+ +.+|.+.++
T Consensus 255 ~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~---~~~G~l~~l 331 (571)
T 2ad6_A 255 NPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHI---DRNGILYTL 331 (571)
T ss_dssp CCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEE---CTTSEEEEE
T ss_pred CCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEe---CCCcEEEEE
Confidence 2 3699999999998777653211 0011111112432 466667 689999999
Q ss_pred eCCCCCCceeEeeec-----------CCCc--------------------------eEEeEEeCCCCEEEEEEe------
Q psy14130 294 DENDLNTPLALETVD-----------SSSG--------------------------VLFPYYDHDTRILFLAGK------ 330 (494)
Q Consensus 294 d~~~~~~~~~~~~~~-----------~~~~--------------------------v~~~~~~~~~~~l~~~g~------ 330 (494)
|..+++..-...... .... ...++|+|++..+|+...
T Consensus 332 D~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~ 411 (571)
T 2ad6_A 332 NRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDW 411 (571)
T ss_dssp ETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEE
T ss_pred ECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccc
Confidence 988765432221100 0000 124688999888877542
Q ss_pred ------------------------------CCCcEEEEEeeCCCceEEecccccCCCCeeEEEEe-cCCceeee-cccee
Q psy14130 331 ------------------------------GDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFM-PKRGCDVT-QCEIF 378 (494)
Q Consensus 331 ------------------------------~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~-p~~~~~~~-~~~~~ 378 (494)
.+|.|..||+.+++...+.-. ..++.+..+. .++.+++. .++.+
T Consensus 412 ~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~----~~~~~~~~~~t~gg~v~~g~~dg~l 487 (571)
T 2ad6_A 412 EPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWE----KFAAWGGTLYTKGGLVWYATLDGYL 487 (571)
T ss_dssp EECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEE----SSCCCSBCEEETTTEEEEECTTSEE
T ss_pred cccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecC----CCCccceeEEECCCEEEEEcCCCeE
Confidence 357899999999986544422 2223333333 23444443 47888
Q ss_pred EEEEeeCC
Q psy14130 379 RFFKLHTT 386 (494)
Q Consensus 379 ~~~~l~~~ 386 (494)
+.|+..++
T Consensus 488 ~a~D~~tG 495 (571)
T 2ad6_A 488 KALDNKDG 495 (571)
T ss_dssp EEEETTTC
T ss_pred EEEECCCC
Confidence 88887763
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00037 Score=72.22 Aligned_cols=161 Identities=8% Similarity=-0.145 Sum_probs=101.8
Q ss_pred EEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeC-C-CeEEEEeCCCCceEEE
Q psy14130 179 VGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCK-D-KTVRVLDPRTGLVISQ 256 (494)
Q Consensus 179 V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~-d-~~v~iwd~~~~~~~~~ 256 (494)
...|++.+.+.+++++-...+.|.+.++........+.........|+++|.+.+|+.+.. . +.|..+++.... ...
T Consensus 455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~-~~~ 533 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYS 533 (699)
T ss_dssp CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC-CCE
T ss_pred cceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC-eeE
Confidence 4568888655466666666789999998755444333333355678999996555554443 2 678888775332 222
Q ss_pred eeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee-cCCCceEEeEEeCCCCEEEEEEeCCCcE
Q psy14130 257 GVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV-DSSSGVLFPYYDHDTRILFLAGKGDGNI 335 (494)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~g~~dg~i 335 (494)
+..........+++.+++++|+++- ...+.|..+|+..... ..+... ........+++. +..||++....+.|
T Consensus 534 l~~~~l~~PnGlavd~~~~~LY~aD---~~~~~I~~~d~dG~~~-~~~~~~~~~~~~P~glavd--~~~lywtd~~~~~V 607 (699)
T 1n7d_A 534 LVTENIQWPNGITLDLLSGRLYWVD---SKLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAI 607 (699)
T ss_dssp ESCSSCSSCCCEEECTTTCCEEEEE---TTTTEEEEECSSSSCC-EEECCCSSSCSSCCCCEEE--TTEEEEECSTTTCE
T ss_pred EEeCCCCCccEEEEeccCCEEEEEe---cCCCeEEEEccCCCce-EEEEecCCcCCCceEeEEE--CCEEEEEeCCCCeE
Confidence 2212222367899999888999888 6788999999875322 222111 111223445554 44677888788899
Q ss_pred EEEEeeCCCce
Q psy14130 336 RYYELTNERPY 346 (494)
Q Consensus 336 ~~wd~~~~~~~ 346 (494)
..++..+++..
T Consensus 608 ~~~d~~~G~~~ 618 (699)
T 1n7d_A 608 FSANRLTGSDV 618 (699)
T ss_dssp EEEETTTEEEE
T ss_pred EEEEccCCCce
Confidence 99998777653
|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.67 E-value=0.027 Score=49.94 Aligned_cols=165 Identities=13% Similarity=0.135 Sum_probs=105.9
Q ss_pred EecCCCCceEEEEEcCCCCEEE-EEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEE
Q psy14130 214 VIDCHPDVINCLSFNRDGSRLV-TTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGL 292 (494)
Q Consensus 214 ~~~~h~~~v~~l~~~~~~~~l~-s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~i 292 (494)
.+.+-...+..++|+|++..|+ +...++.|...|+. ++.++.+........-.+++.++ +.++.+. -.++.+.+
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~-g~~~vs~---E~~~~l~~ 95 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGD-NQFVISD---ERDYAIYV 95 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECST-TEEEEEE---TTTTEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCC-CEEEEEE---CCCCcEEE
Confidence 4556667899999999766554 57788999999998 88888875433334678888877 5665555 46788999
Q ss_pred EeCCCCCCce--eEeee-----cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeC---CCceEEeccc-----ccCCC
Q psy14130 293 WDENDLNTPL--ALETV-----DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTN---ERPYIHFLNQ-----SLSGA 357 (494)
Q Consensus 293 wd~~~~~~~~--~~~~~-----~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~---~~~~~~~~~~-----~~~~~ 357 (494)
+++....... ....+ ....+...++|+|.++.|+++. +.....+|.+.. ... .+.... .....
T Consensus 96 ~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~-E~~p~~i~~~~g~~~~~~-l~i~~~~~~~~~~~~~ 173 (255)
T 3qqz_A 96 ISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFK-EKNPIEVYKVNGLLSSNE-LHISKDKALQRQFTLD 173 (255)
T ss_dssp EEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEE-ESSSEEEEEEESTTCSSC-CEEEECHHHHHTCCSS
T ss_pred EEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEE-CcCCceEEEEcccccCCc-eeeecchhhccccccC
Confidence 9876544311 11111 2234568899999998886755 444556666651 111 111110 01123
Q ss_pred CeeEEEEecC-CceeeeccceeEEEEeeC
Q psy14130 358 PQRGLGFMPK-RGCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 358 ~v~~~~~~p~-~~~~~~~~~~~~~~~l~~ 385 (494)
...++++.|. +.+++.+++.-++..++.
T Consensus 174 d~S~l~~dp~tg~lliLS~~s~~L~~~d~ 202 (255)
T 3qqz_A 174 DVSGAEFNQQKNTLLVLSHESRALQEVTL 202 (255)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEECT
T ss_pred CceeEEEcCCCCeEEEEECCCCeEEEEcC
Confidence 4789999995 456666777677777766
|
| >2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.66 E-value=0.0096 Score=56.03 Aligned_cols=189 Identities=16% Similarity=0.088 Sum_probs=105.1
Q ss_pred cccEEEEEEcCC---CCCEEEEEeCC-----CeEEEEECCCCe-----EE-EEec---CCCCceEEEEEcCCCCEEEEEe
Q psy14130 176 KRRVGYIEWHPT---AENVVASAGFD-----YLIILWDVGKGE-----AL-TVID---CHPDVINCLSFNRDGSRLVTTC 238 (494)
Q Consensus 176 ~~~V~~~~~~p~---~~~~l~s~s~d-----~~v~iwd~~~~~-----~~-~~~~---~h~~~v~~l~~~~~~~~l~s~~ 238 (494)
......|+|+|+ +..+.++-+.. ..|..++...+. .+ ..+. +.......++|.|||.+.++.+
T Consensus 74 ~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 74 ESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred CCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 456789999998 43455554432 678888876431 11 2233 1112346899999998766643
Q ss_pred C-------------CCeEEEEeCCCC-------------ceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCc----
Q psy14130 239 K-------------DKTVRVLDPRTG-------------LVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDR---- 288 (494)
Q Consensus 239 ~-------------d~~v~iwd~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~---- 288 (494)
. .++|.-+|.... ....-..++.. ...++|.++++.|+++-. ..++
T Consensus 154 ~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rn--p~g~a~d~~~g~l~v~d~--g~~~~~~~ 229 (352)
T 2ism_A 154 EVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGHRN--PQGLAWHPKTGELFSSEH--GPSGEQGY 229 (352)
T ss_dssp CTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECCSE--ECCCEECTTTCCEEEEEE--CC------
T ss_pred CCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcCCC--cccEEEECCCCCEEEEEc--CCCCCCCC
Confidence 2 256777776530 10111123332 577889996677777763 2222
Q ss_pred ---eEEEEeCCC---------------CCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCc-----
Q psy14130 289 ---QVGLWDEND---------------LNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERP----- 345 (494)
Q Consensus 289 ---~i~iwd~~~---------------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~----- 345 (494)
.|.+..... ...+. ...........++| .++. +|++.-..+.|...++.....
T Consensus 230 ~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~--~~~~~~~ap~G~~~-~~G~-l~v~~~~~~~v~~v~~~~~~~~~~~~ 305 (352)
T 2ism_A 230 GHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPL--YFWPQGFPPGNLAF-FRGD-LYVAGLRGQALLRLVLEGERGRWRVL 305 (352)
T ss_dssp CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCS--EECTTCCCEEEEEE-ETTE-EEEEETTTTEEEEEEEEEETTEEEEE
T ss_pred CCeEEEEeccCCcCCCCcccCCCCCCCCcCCe--EecCCCCCCcceEE-ECCE-EEEEECCCCEEEEEEECCCCcceeec
Confidence 344433211 00111 11223344556667 3554 447766777888888875542
Q ss_pred -eEEecccccCCCCeeEEEEecCCceeeecc
Q psy14130 346 -YIHFLNQSLSGAPQRGLGFMPKRGCDVTQC 375 (494)
Q Consensus 346 -~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~ 375 (494)
...++ .....++++++.|||.+.++.+
T Consensus 306 ~~~~~~---~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 306 RVETAL---SGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp EEEEEE---ESSCCEEEEEECTTSCEEEEEC
T ss_pred chheec---ccCCCeeEEEECCCCcEEEEEe
Confidence 12222 1235689999999998887753
|
| >3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A* | Back alignment and structure |
|---|
Probab=97.64 E-value=0.021 Score=53.34 Aligned_cols=170 Identities=14% Similarity=-0.007 Sum_probs=99.6
Q ss_pred CCCeEEEEECCCC--eE-EEEecC-----CCCceEEEEEcC--CCC-EEEEE-eC--CCeEEEEeCCCCc----eEEEee
Q psy14130 197 FDYLIILWDVGKG--EA-LTVIDC-----HPDVINCLSFNR--DGS-RLVTT-CK--DKTVRVLDPRTGL----VISQGV 258 (494)
Q Consensus 197 ~d~~v~iwd~~~~--~~-~~~~~~-----h~~~v~~l~~~~--~~~-~l~s~-~~--d~~v~iwd~~~~~----~~~~~~ 258 (494)
.+|.|.++|+.+. +. ...+.+ .......+.+.+ ++. +|+.+ .. +.+|.+|++..+. .+..+.
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 6899999999732 21 112332 224677788766 454 34444 33 5678887765432 334444
Q ss_pred ecCCCCceEEEEECCCCeEEEEEe---cC-----------CCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCE
Q psy14130 259 CHPGTRSSKAVFIGDTGRIVTTGF---SR-----------HSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRI 324 (494)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~l~~~g~---~~-----------~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 324 (494)
+..-...+.++..++ +.++++.. +. ...+.|.-+|.. .. .. ..+.-...+.++|+||++.
T Consensus 161 g~~~~~pND~~v~~~-G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~-~~--~~~~l~~pNGia~spDg~~ 234 (355)
T 3sre_A 161 HKLLPSVNDIVAVGP-EHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DV-RV--VAEGFDFANGINISPDGKY 234 (355)
T ss_dssp CTTCSSEEEEEEEET-TEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CC-EE--EEEEESSEEEEEECTTSSE
T ss_pred cCCCCCCceEEEeCC-CCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eE-EE--eecCCcccCcceECCCCCE
Confidence 444445788888888 56666651 00 113556666652 21 11 1223345678999999999
Q ss_pred EEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEec-CCceeee
Q psy14130 325 LFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMP-KRGCDVT 373 (494)
Q Consensus 325 l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~~~ 373 (494)
||++-+..+.|..|++.....+.. ...+.......++++.+ +|.+.++
T Consensus 235 lYvadt~~~~I~~~~~~~~g~l~~-~~~~~~~g~PDGi~vD~e~G~lwva 283 (355)
T 3sre_A 235 VYIAELLAHKIHVYEKHANWTLTP-LRVLSFDTLVDNISVDPVTGDLWVG 283 (355)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEE-EEEEECSSEEEEEEECTTTCCEEEE
T ss_pred EEEEeCCCCeEEEEEECCCCcEec-CEEEeCCCCCceEEEeCCCCcEEEE
Confidence 999998999999999974321111 11112245567778877 4766553
|
| >3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ... | Back alignment and structure |
|---|
Probab=97.62 E-value=0.12 Score=56.37 Aligned_cols=175 Identities=10% Similarity=0.111 Sum_probs=100.7
Q ss_pred eEEEEECCCCeEEEEecC-CCCceEEEE---EcCC-CCEEEEEe----------CCCeEEEEeCCCCceEEEee-ecCCC
Q psy14130 200 LIILWDVGKGEALTVIDC-HPDVINCLS---FNRD-GSRLVTTC----------KDKTVRVLDPRTGLVISQGV-CHPGT 263 (494)
Q Consensus 200 ~v~iwd~~~~~~~~~~~~-h~~~v~~l~---~~~~-~~~l~s~~----------~d~~v~iwd~~~~~~~~~~~-~~~~~ 263 (494)
.|++.|..+.+.+..++- ..+.+.+++ |..+ ..+|+.|+ ..|.|.+|++..++...... ...+.
T Consensus 808 ~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~ 887 (1158)
T 3ei3_A 808 NLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 887 (1158)
T ss_dssp EEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSC
T ss_pred EEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCc
Confidence 477788777776655442 234455555 3332 46888776 35789999987555322221 12343
Q ss_pred CceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCC
Q psy14130 264 RSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNE 343 (494)
Q Consensus 264 ~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~ 343 (494)
+.+++-.. ++++++- ...|++|++...+. +.... .....+..+.....++++ +.|..-..|.++..+..
T Consensus 888 -v~al~~~~--g~Lla~i-----g~~l~vy~l~~~~~-L~~~~-~~~~~i~~~~l~~~~~~I-~vgD~~~Sv~~~~y~~~ 956 (1158)
T 3ei3_A 888 -VYSMVEFN--GKLLASI-----NSTVRLYEWTTEKE-LRTEC-NHYNNIMALYLKTKGDFI-LVGDLMRSVLLLAYKPM 956 (1158)
T ss_dssp -EEEEEEET--TEEEEEE-----TTEEEEEEECTTSC-EEEEE-EECCCSCEEEEEEETTEE-EEEESSBCEEEEEEETT
T ss_pred -CEEEeeeC--CEEEEEc-----CCEEEEEECCCCce-EEEEe-eccccEEEEEEeccCCEE-EEEEhhheEEEEEEEcC
Confidence 66666543 5666654 68999999975432 22111 111122222333356777 77777777888777655
Q ss_pred CceEEecccccCCCCeeEEEEecCCceeeec-cceeEEEEeeC
Q psy14130 344 RPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ-CEIFRFFKLHT 385 (494)
Q Consensus 344 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~-~~~~~~~~l~~ 385 (494)
......+..-.....++++.|.-+..++++. .+.+.+++...
T Consensus 957 ~~~L~~~a~D~~~~~vta~~~ld~~t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 957 EGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp TTEEEEEEECCSCBCEEEEEEEETTEEEEEETTSEEEEEEECT
T ss_pred CCeEEEEEeecccccEEEEEEEccCcEEEEcCCCcEEEEecCC
Confidence 4334444444445678899998776655543 55566555543
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=97.58 E-value=0.0064 Score=61.45 Aligned_cols=168 Identities=11% Similarity=0.114 Sum_probs=100.5
Q ss_pred CeEEEEECCCCeEEEEecC--CC--------CceEEEEEc-CCCC---EEEEEeCCCeEEEEeCCCCceEEEeeecCC--
Q psy14130 199 YLIILWDVGKGEALTVIDC--HP--------DVINCLSFN-RDGS---RLVTTCKDKTVRVLDPRTGLVISQGVCHPG-- 262 (494)
Q Consensus 199 ~~v~iwd~~~~~~~~~~~~--h~--------~~v~~l~~~-~~~~---~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~-- 262 (494)
+.|..+|+.+|+.+..++. |. .++. +... .+|+ .++.++.+|.+.++|.++|+.+........
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~ 369 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNIT 369 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCC
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCcc
Confidence 6899999999999888753 32 1221 1222 4674 788899999999999999998766544320
Q ss_pred ----------C--------------------------------CceEEEEECCCCeEEEEEec-----------------
Q psy14130 263 ----------T--------------------------------RSSKAVFIGDTGRIVTTGFS----------------- 283 (494)
Q Consensus 263 ----------~--------------------------------~~~~~~~~~~~~~l~~~g~~----------------- 283 (494)
. ....+++.|+.+.+++....
T Consensus 370 ~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~ 449 (582)
T 1flg_A 370 WASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSA 449 (582)
T ss_dssp SEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSC
T ss_pred ccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCc
Confidence 0 00123455555555543310
Q ss_pred ------------CCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecc
Q psy14130 284 ------------RHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLN 351 (494)
Q Consensus 284 ------------~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~ 351 (494)
...++.|.-||+.+++..-.... ...+........+..+ ..|+.||.++.||.++++.+.++..
T Consensus 450 ~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~---~~~~~~g~~~tagglv-f~g~~dg~l~A~D~~tG~~lW~~~~ 525 (582)
T 1flg_A 450 YLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKE---HLPLWAGVLATAGNLV-FTGTGDGYFKAFDAKSGKELWKFQT 525 (582)
T ss_dssp CCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEE---SSCCCSCCEEETTTEE-EEECTTSEEEEEETTTCCEEEEEEC
T ss_pred eeccceeecCCCCCCcceEEEEECCCCCEEEEecC---CCCCcccceEeCCCEE-EEECCCCcEEEEECCCCCEEEEecC
Confidence 01368899999988765333322 1122211122245666 4588999999999999998765533
Q ss_pred cccCCCCeeEEEEecCCceeee
Q psy14130 352 QSLSGAPQRGLGFMPKRGCDVT 373 (494)
Q Consensus 352 ~~~~~~~v~~~~~~p~~~~~~~ 373 (494)
. ......-+.+..+|...+.
T Consensus 526 ~--~g~~a~P~~y~~~G~qYv~ 545 (582)
T 1flg_A 526 G--SGIVSPPITWEQDGEQYLG 545 (582)
T ss_dssp S--SCCCSCCEEEEETTEEEEE
T ss_pred C--CCcccCceEEEECCEEEEE
Confidence 2 1111122566677764443
|
| >3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A* | Back alignment and structure |
|---|
Probab=97.54 E-value=0.042 Score=51.60 Aligned_cols=203 Identities=12% Similarity=0.068 Sum_probs=112.8
Q ss_pred cccEEEEEEcCC---CCCEEEEEeC---C----CeEEEEECCCC-------eEE-EEecC-CCCceEEEEEcCCCCEEEE
Q psy14130 176 KRRVGYIEWHPT---AENVVASAGF---D----YLIILWDVGKG-------EAL-TVIDC-HPDVINCLSFNRDGSRLVT 236 (494)
Q Consensus 176 ~~~V~~~~~~p~---~~~~l~s~s~---d----~~v~iwd~~~~-------~~~-~~~~~-h~~~v~~l~~~~~~~~l~s 236 (494)
......|+++|+ +..+.++-+. + ..|..++.... +.+ ..+.. .......|+|.|||.++++
T Consensus 72 ~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt 151 (354)
T 3a9g_A 72 EAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYIT 151 (354)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEE
T ss_pred CCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEE
Confidence 356789999997 4245554442 3 56777887644 111 11221 1123467999999987776
Q ss_pred EeC-------------CCeEEEEeCCCC--------ceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeC
Q psy14130 237 TCK-------------DKTVRVLDPRTG--------LVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDE 295 (494)
Q Consensus 237 ~~~-------------d~~v~iwd~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~ 295 (494)
.+. .++|.-+|.... ....-..++.. ...++|.++.+.++++-.....-..|.+...
T Consensus 152 ~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~rn--p~Gla~d~~~g~l~v~d~g~~~~dei~~i~~ 229 (354)
T 3a9g_A 152 TGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSYGHRN--PQGIDWHRASGVMVATEHGPVGHDEVNIILK 229 (354)
T ss_dssp CCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEECCSC--CCEEEECTTTCCEEEEECCSSSCCEEEEECT
T ss_pred ECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEccCC--cceEEEeCCCCCEEEEecCCCCCcEEEEecC
Confidence 432 256666666432 11111223433 5789999966788877621111123444332
Q ss_pred CC---------------CCCceeEeee-cCCCceEEeEE-------eCCCCEEEEEEeCCCcEEEEEeeCCCceE---Ee
Q psy14130 296 ND---------------LNTPLALETV-DSSSGVLFPYY-------DHDTRILFLAGKGDGNIRYYELTNERPYI---HF 349 (494)
Q Consensus 296 ~~---------------~~~~~~~~~~-~~~~~v~~~~~-------~~~~~~l~~~g~~dg~i~~wd~~~~~~~~---~~ 349 (494)
.. ...+. ... ........++| ..++.++ ++.-..+.|...++....... .+
T Consensus 230 G~nyGwp~~~g~~~~~~~~~p~--~~~~~~~~ap~G~~~y~g~~fp~~~G~l~-v~~~~~~~v~~~~~~~~g~~~~~~~~ 306 (354)
T 3a9g_A 230 GGNYGWPLATGKAGRGEFVDPV--IDTGSETWAPSGASFVHGDMFPGLRGWLL-IACLRGSMLAAVNFGDNMEVRKISTF 306 (354)
T ss_dssp TCBCCTTTCCSCCCCTTSCCCS--EECTTCCCCEEEEEECCSSSCGGGTTEEE-EEETTTTEEEEEEECGGGCEEEEEEE
T ss_pred CCcCCCCcccCCCCCCCCcCCE--eecCCCCcCCcceEEECCCCCcccCCcEE-EEEcCCCEEEEEEECCCCcccceeee
Confidence 11 00111 111 12345666777 3456444 776677889888887532221 22
Q ss_pred cccccCCCCeeEEEEecCCceeeecc-cee---------EEEEeeC
Q psy14130 350 LNQSLSGAPQRGLGFMPKRGCDVTQC-EIF---------RFFKLHT 385 (494)
Q Consensus 350 ~~~~~~~~~v~~~~~~p~~~~~~~~~-~~~---------~~~~l~~ 385 (494)
+.. ....+.++++.|||.+.++.+ ... +||++..
T Consensus 307 ~~~--~~~rp~~v~~~pDG~lyv~~~~~~G~g~~~~~~g~i~ri~~ 350 (354)
T 3a9g_A 307 FKN--VFGRLRDVVIDDDGGILISTSNRDGRGSLRAGDDKILKIVS 350 (354)
T ss_dssp CTT--TSCCEEEEEECTTSCEEEEECTTSSSSCCCTTCSCEEEEEE
T ss_pred ccC--CCCCeeEEEECCCCcEEEEEeCCCCCcCCCCCCCEEEEEec
Confidence 221 135689999999998887764 233 7887764
|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.53 E-value=0.078 Score=51.80 Aligned_cols=235 Identities=10% Similarity=0.041 Sum_probs=128.5
Q ss_pred CcEEEEEEc--CcEEEEEcCCCCCCCCcccceEec-ccccccEEEEEE-------cCCCCCEEEEEeCCC------eEEE
Q psy14130 140 GGAFLVLPI--HRVKLWYIPDGGLSGNLNEWIMDL-HGHKRRVGYIEW-------HPTAENVVASAGFDY------LIIL 203 (494)
Q Consensus 140 ~g~~~~~~~--~~v~iw~~~~~~~~~~~~~~~~~~-~~h~~~V~~~~~-------~p~~~~~l~s~s~d~------~v~i 203 (494)
++.+.++.. +.|++.|..++.+. .+... .+.......++| ++++..++++...++ .|.+
T Consensus 151 ~~~Lyv~~~~~~~i~~ID~~~~~v~-----~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~ 225 (496)
T 3kya_A 151 KDHLYICYDGHKAIQLIDLKNRMLS-----SPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYI 225 (496)
T ss_dssp EEEEEEEEETEEEEEEEETTTTEEE-----EEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEE
T ss_pred CCEEEEEECCCCeEEEEECCCCEEE-----EEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEE
Confidence 344554443 35777787765221 11111 112235789999 999843444444331 3667
Q ss_pred EECCC-CeEE-----EEecCCCCceEEEEEcC-CCCEEEEEeCCCeEEEEeCC-------CCce-----------EEEe-
Q psy14130 204 WDVGK-GEAL-----TVIDCHPDVINCLSFNR-DGSRLVTTCKDKTVRVLDPR-------TGLV-----------ISQG- 257 (494)
Q Consensus 204 wd~~~-~~~~-----~~~~~h~~~v~~l~~~~-~~~~l~s~~~d~~v~iwd~~-------~~~~-----------~~~~- 257 (494)
.+... +... ..+... .....++.+| ++.++++-..++.|..+|+. ++.. ...+
T Consensus 226 i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~ 304 (496)
T 3kya_A 226 IKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLF 304 (496)
T ss_dssp EECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEE
T ss_pred EecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeE
Confidence 76443 1211 122211 2345778999 45566666678899999997 5543 1222
Q ss_pred eecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCC----ceeEeee-cC------------CCceE-EeEEe
Q psy14130 258 VCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNT----PLALETV-DS------------SSGVL-FPYYD 319 (494)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~----~~~~~~~-~~------------~~~v~-~~~~~ 319 (494)
..........++++|+++.++.+- .....|+.+|...... +..+... .. -.... .++.+
T Consensus 305 ~~~~~~~p~~ia~~p~G~~lYvaD---~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd 381 (496)
T 3kya_A 305 TIADPSWEFQIFIHPTGKYAYFGV---INNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVK 381 (496)
T ss_dssp ECSSSSCCEEEEECTTSSEEEEEE---TTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEE
T ss_pred ecCCCCCceEEEEcCCCCEEEEEe---CCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEc
Confidence 222222357899999977677777 6788999976532111 1122111 00 01233 34444
Q ss_pred C------CCCEEEEEEeCCCcEEEEEeeCCCceEEecccc-------------c--------CCCCeeEEEEecC-Ccee
Q psy14130 320 H------DTRILFLAGKGDGNIRYYELTNERPYIHFLNQS-------------L--------SGAPQRGLGFMPK-RGCD 371 (494)
Q Consensus 320 ~------~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~-------------~--------~~~~v~~~~~~p~-~~~~ 371 (494)
. ....||++-.....|+.++ .++. +..+...- . .-....+|++.++ +.+.
T Consensus 382 ~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~ly 459 (496)
T 3kya_A 382 NPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFY 459 (496)
T ss_dssp CTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEE
T ss_pred cccccccCCCeEEEEECCCCEEEEEe-CCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEE
Confidence 1 2335558877888899998 4553 23332210 0 0134678999996 8888
Q ss_pred eec--cceeEEEEeeC
Q psy14130 372 VTQ--CEIFRFFKLHT 385 (494)
Q Consensus 372 ~~~--~~~~~~~~l~~ 385 (494)
++. ...+|.+.+..
T Consensus 460 VaD~~N~rIrki~~~~ 475 (496)
T 3kya_A 460 VHDQVGHTIRTISMEQ 475 (496)
T ss_dssp EEETTTTEEEEEEECC
T ss_pred EEeCCCCEEEEEECCC
Confidence 875 44555555544
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=97.53 E-value=0.011 Score=59.72 Aligned_cols=152 Identities=9% Similarity=0.046 Sum_probs=92.8
Q ss_pred EEEEeCCCeEEEEECCCCeEEEEecCCC----CceEE-EEEcCCCCEEEEEe------CCCeEEEEeCCCCceEEEeeec
Q psy14130 192 VASAGFDYLIILWDVGKGEALTVIDCHP----DVINC-LSFNRDGSRLVTTC------KDKTVRVLDPRTGLVISQGVCH 260 (494)
Q Consensus 192 l~s~s~d~~v~iwd~~~~~~~~~~~~h~----~~v~~-l~~~~~~~~l~s~~------~d~~v~iwd~~~~~~~~~~~~~ 260 (494)
++.++.|+.|.-+|..+|+.+....... ..+.+ -... ++ .++.++ .++.|+.+|.++|+.+-++...
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~ 201 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYAT 201 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESS
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCC
Confidence 7778889999999999999887765322 12221 1111 44 455554 3899999999999988766533
Q ss_pred CCC-------------------------------------CceEEEEECCCCeEEEEEecCCCC----------------
Q psy14130 261 PGT-------------------------------------RSSKAVFIGDTGRIVTTGFSRHSD---------------- 287 (494)
Q Consensus 261 ~~~-------------------------------------~~~~~~~~~~~~~l~~~g~~~~~d---------------- 287 (494)
... .....++.+..+.++... .+
T Consensus 202 ~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~----g~~~p~~~~~r~gd~~y~ 277 (599)
T 1w6s_A 202 GPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGT----GNPAPWNETMRPGDNKWT 277 (599)
T ss_dssp SCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEEC----CCCSCSCGGGSCSCCTTS
T ss_pred CCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeC----CCCccccCcccCCCcccc
Confidence 211 001344556645444432 22
Q ss_pred ceEEEEeCCCCCCceeEeeecCC-------CceEEeEEe-CCCC--EEEEEEeCCCcEEEEEeeCCCceEEe
Q psy14130 288 RQVGLWDENDLNTPLALETVDSS-------SGVLFPYYD-HDTR--ILFLAGKGDGNIRYYELTNERPYIHF 349 (494)
Q Consensus 288 ~~i~iwd~~~~~~~~~~~~~~~~-------~~v~~~~~~-~~~~--~l~~~g~~dg~i~~wd~~~~~~~~~~ 349 (494)
..|.-+|.++++..-..+...+. .....+... .+|+ .+++.++.+|.++++|.++++.+...
T Consensus 278 ~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~ 349 (599)
T 1w6s_A 278 MTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSAN 349 (599)
T ss_dssp SEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred ceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecc
Confidence 47889999887654444332221 111112222 5674 34477889999999999999876543
|
| >3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.067 Score=56.27 Aligned_cols=185 Identities=10% Similarity=-0.058 Sum_probs=111.2
Q ss_pred cccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEe---cCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc
Q psy14130 176 KRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVI---DCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGL 252 (494)
Q Consensus 176 ~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~---~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~ 252 (494)
...|.++...++| + |..|+.++-|..+|..++...... ......|.++...++|.+.+ |+.++-|..+|..+++
T Consensus 362 ~~~v~~i~~d~~g-~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~ 438 (781)
T 3v9f_A 362 NKVVSSVCDDGQG-K-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKK 438 (781)
T ss_dssp SSCEEEEEECTTS-C-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCE
T ss_pred CcceEEEEEcCCC-C-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCc
Confidence 3569999998887 3 555665667889998654322111 12346799999988887554 6666779999988776
Q ss_pred eEEEeee--cCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec----CCCceEEeEEeCCCCEEE
Q psy14130 253 VISQGVC--HPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD----SSSGVLFPYYDHDTRILF 326 (494)
Q Consensus 253 ~~~~~~~--~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~ 326 (494)
.. .+.. .....+.++...++ +.+.++. . +-|..||..+.... ...... ....+.++..+++|...
T Consensus 439 ~~-~~~~~~~~~~~v~~i~~d~~-g~lwigt----~-~Gl~~~~~~~~~~~-~~~~~~~~~~~~~~i~~i~~d~~g~lW- 509 (781)
T 3v9f_A 439 FQ-IIELEKNELLDVRVFYEDKN-KKIWIGT----H-AGVFVIDLASKKVI-HHYDTSNSQLLENFVRSIAQDSEGRFW- 509 (781)
T ss_dssp EE-ECCSTTTCCCCEEEEEECTT-SEEEEEE----T-TEEEEEESSSSSCC-EEECTTTSSCSCSCEEEEEECTTCCEE-
T ss_pred EE-EeccCCCCCCeEEEEEECCC-CCEEEEE----C-CceEEEeCCCCeEE-ecccCcccccccceeEEEEEcCCCCEE-
Confidence 33 2221 11222555555444 5666555 3 56888997764321 111111 13568888899988876
Q ss_pred EEEeCCCcEEEEEeeCCCceEEecc-cccCCCCeeEEEEecCCceeeec
Q psy14130 327 LAGKGDGNIRYYELTNERPYIHFLN-QSLSGAPQRGLGFMPKRGCDVTQ 374 (494)
Q Consensus 327 ~~g~~dg~i~~wd~~~~~~~~~~~~-~~~~~~~v~~~~~~p~~~~~~~~ 374 (494)
++ +.++-|..||..+++. ..+.. .-.....|.++...++|.+.++.
T Consensus 510 ig-t~~~Gl~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~lWi~T 556 (781)
T 3v9f_A 510 IG-TFGGGVGIYTPDMQLV-RKFNQYEGFCSNTINQIYRSSKGQMWLAT 556 (781)
T ss_dssp EE-ESSSCEEEECTTCCEE-EEECTTTTCSCSCEEEEEECTTSCEEEEE
T ss_pred EE-EcCCCEEEEeCCCCeE-EEccCCCCCCCCeeEEEEECCCCCEEEEE
Confidence 43 3434477788766542 22221 11123568888888887766554
|
| >2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} | Back alignment and structure |
|---|
Probab=97.45 E-value=0.032 Score=51.08 Aligned_cols=159 Identities=11% Similarity=0.097 Sum_probs=101.0
Q ss_pred cEEEEEE---cCCCCCEEEEEe-------------CCCeEEEEECC---CCeEEEEec--C-----------CCCceEEE
Q psy14130 178 RVGYIEW---HPTAENVVASAG-------------FDYLIILWDVG---KGEALTVID--C-----------HPDVINCL 225 (494)
Q Consensus 178 ~V~~~~~---~p~~~~~l~s~s-------------~d~~v~iwd~~---~~~~~~~~~--~-----------h~~~v~~l 225 (494)
.+..|.| .|.+ .++++.. .+..|..+|+. +++.+.... . -......+
T Consensus 64 ~~sGl~~~~~D~~g-rL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDv 142 (334)
T 2p9w_A 64 QMSGLSLLTHDNSK-RLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQS 142 (334)
T ss_dssp EEEEEEESSSSSCC-EEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEE
T ss_pred eeeEEEEeccCCCC-cEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCcee
Confidence 4579999 6886 5776543 26789999998 777655443 1 11358899
Q ss_pred EEcCCCCEEEEEeCC-CeEEEEeCCCCceEEEee-----ecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCC
Q psy14130 226 SFNRDGSRLVTTCKD-KTVRVLDPRTGLVISQGV-----CHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLN 299 (494)
Q Consensus 226 ~~~~~~~~l~s~~~d-~~v~iwd~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~ 299 (494)
+..++|+..++++.- +.|...+..... +..+. .....-...+++.|++..|++.. + .+.+..+|+....
T Consensus 143 avD~~GnaYVt~s~~~~~I~rV~pdG~~-~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~---~-~g~L~~fD~~~pv 217 (334)
T 2p9w_A 143 AQDRDGNSYVAFALGMPAIARVSADGKT-VSTFAWESGNGGQRPGYSGITFDPHSNKLIAFG---G-PRALTAFDVSKPY 217 (334)
T ss_dssp EECTTSCEEEEEEESSCEEEEECTTSCC-EEEEEECCCCSSSCCSCSEEEEETTTTEEEEES---S-SSSEEEEECSSSS
T ss_pred EECCCCCEEEeCCCCCCeEEEEeCCCCE-EeeeeecCCCcccccCcceEEEeCCCCEEEEEc---C-CCeEEEEcCCCCc
Confidence 999999999999988 888888877443 33222 11111256899999977777776 4 9999999988532
Q ss_pred C-ceeEeeec---CCCceEE-eEEeCCCCEEEEEEeCCCcEEEEEeeC
Q psy14130 300 T-PLALETVD---SSSGVLF-PYYDHDTRILFLAGKGDGNIRYYELTN 342 (494)
Q Consensus 300 ~-~~~~~~~~---~~~~v~~-~~~~~~~~~l~~~g~~dg~i~~wd~~~ 342 (494)
. +....... ....... +.-..+|+.|+++.+..+.+.+.+...
T Consensus 218 ~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 218 AWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGARAPYAISFRSWDN 265 (334)
T ss_dssp CCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEETTEEEEEECSST
T ss_pred ceeecccccCCcccccCcccccccccCCEEEEEEcCCCCEEEEECCCC
Confidence 2 11111001 1112222 233457888767777776655555444
|
| >4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* | Back alignment and structure |
|---|
Probab=97.42 E-value=0.14 Score=52.12 Aligned_cols=200 Identities=14% Similarity=0.043 Sum_probs=128.6
Q ss_pred ccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecC------CCCceEEEEEcCCCCEEE-EEeCCCeEEEEeCC
Q psy14130 177 RRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDC------HPDVINCLSFNRDGSRLV-TTCKDKTVRVLDPR 249 (494)
Q Consensus 177 ~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~------h~~~v~~l~~~~~~~~l~-s~~~d~~v~iwd~~ 249 (494)
..+.+++|.+..+.++.+=...+.|+.+++........+.. ....+.++++.+.++.|+ +-+..+.|.+.++.
T Consensus 340 ~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~ 419 (628)
T 4a0p_A 340 RNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLD 419 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECC
Confidence 55789999997645555555678899998864433333322 234688999999766554 55567899999986
Q ss_pred CCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCc-eEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEE
Q psy14130 250 TGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDR-QVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLA 328 (494)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~-~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 328 (494)
|+....+.......+..++..|..+.++.+.. .... .|...++..... ..+.. ..-.....++++++++.||.+
T Consensus 420 -G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~--g~~~~~I~r~~~dG~~~-~~l~~-~~l~~P~gla~D~~~~~LYw~ 494 (628)
T 4a0p_A 420 -GRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNL--QERSPKIERAALDGTER-EVLFF-SGLSKPIALALDSRLGKLFWA 494 (628)
T ss_dssp -SCEEEEEEECTTCCEEEEEEETTTTEEEEEEE--ETTEEEEEEEETTSCSC-EEEEC-SSCSCEEEEEEETTTTEEEEE
T ss_pred -CCeEEEEEeCCCCceeeEEEecCCCeEEEeec--CCCCCeEEEEeCCCCCc-EEEEe-ccCCCccEEEEeCCCCEEEEE
Confidence 55454544333334889999997788888873 1222 677777764322 22221 223467889999999999888
Q ss_pred EeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccceeEEEEeeC
Q psy14130 329 GKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 329 g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~~ 385 (494)
-+..+.|...++..... ..+... ......+++... +.+.++.-..-+|+.++.
T Consensus 495 D~~~~~I~~~~~dG~~r-~~~~~~--~~~~P~glav~~-~~ly~tD~~~~~i~~~~k 547 (628)
T 4a0p_A 495 DSDLRRIESSDLSGANR-IVLEDS--NILQPVGLTVFE-NWLYWIDKQQQMIEKIDM 547 (628)
T ss_dssp ETTTTEEEEEETTSCSC-EEEECS--SCSCEEEEEEET-TEEEEEETTTTEEEEEET
T ss_pred eCCCCEEEEEeCCCCce-EEEEcC--CCCCcEEEEEEC-CEEEEEECCCCeEEEEEC
Confidence 87788999999865442 333321 123457888766 566666544445555544
|
| >3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A | Back alignment and structure |
|---|
Probab=97.40 E-value=0.011 Score=54.59 Aligned_cols=149 Identities=15% Similarity=0.121 Sum_probs=92.2
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECC----CCe--EEEEEecCCC--CceEEEEeCCCCCCc
Q psy14130 230 DGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGD----TGR--IVTTGFSRHS--DRQVGLWDENDLNTP 301 (494)
Q Consensus 230 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--l~~~g~~~~~--d~~i~iwd~~~~~~~ 301 (494)
..++++...+.+-+.+||+ +|+.++.+.. +. ...+..-|. +.. ++++.- .. +++|.+|++.....+
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~-~nnVD~r~~~~l~g~~~dla~as~--R~~~~n~l~vf~iDp~~~~ 112 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GK-LNNVDIRYDFPLNGKKVDIAAASN--RSEGKNTIEIYAIDGKNGT 112 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SC-EEEEEEEEEEEETTEEEEEEEEEE--CSTTCCEEEEEEECTTTCC
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CC-cccEEEecccccCCceEeEEEEeC--CCCCCCeEEEEEECCCCCc
Confidence 4567888888899999999 7998888754 22 555554442 111 333331 34 688999977421222
Q ss_pred eeEe-e----ecCC-CceEEeEE--eCC-CC-EEEEEEeCCCcEEEEEeeC---CCceEEecccccCCCCeeEEEEecCC
Q psy14130 302 LALE-T----VDSS-SGVLFPYY--DHD-TR-ILFLAGKGDGNIRYYELTN---ERPYIHFLNQSLSGAPQRGLGFMPKR 368 (494)
Q Consensus 302 ~~~~-~----~~~~-~~v~~~~~--~~~-~~-~l~~~g~~dg~i~~wd~~~---~~~~~~~~~~~~~~~~v~~~~~~p~~ 368 (494)
+... . .... ..+..+++ +|. ++ ++ .....+|.+..|++.. ++...+.+..+..+..+.+++..+..
T Consensus 113 l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~ya-fV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~ 191 (355)
T 3amr_A 113 LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYA-MVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEY 191 (355)
T ss_dssp EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEE-EEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTT
T ss_pred eeeccccccCcCCCCCCeeEEEEEecCCCCcEEE-EEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCC
Confidence 2211 1 0011 34444555 775 44 45 4555779999999943 33334455556667789999999877
Q ss_pred ceeeeccceeEEEEeeC
Q psy14130 369 GCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 369 ~~~~~~~~~~~~~~l~~ 385 (494)
..+..+.+..-||.+..
T Consensus 192 g~Lyv~eEd~GIw~~da 208 (355)
T 3amr_A 192 GRLYIAEEDEAIWKFSA 208 (355)
T ss_dssp TEEEEEETTTEEEEEEC
T ss_pred CeEEEecccceEEEEeC
Confidence 76666655567999884
|
| >2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.063 Score=49.77 Aligned_cols=192 Identities=13% Similarity=0.088 Sum_probs=104.3
Q ss_pred ccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEE-EEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeC--CCCce
Q psy14130 177 RRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEAL-TVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDP--RTGLV 253 (494)
Q Consensus 177 ~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~-~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~--~~~~~ 253 (494)
..+..+.+.+++ .+++.+ .++.|.. ....|+.- .....+...+.++.+.+++.+++.+...+..+-.|- .+.+.
T Consensus 122 ~~~~~i~~~~~~-~~~~~~-~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~ 198 (327)
T 2xbg_A 122 GSPRLIKALGNG-SAEMIT-NVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEP 198 (327)
T ss_dssp SCEEEEEEEETT-EEEEEE-TTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEE
T ss_pred CCeEEEEEECCC-CEEEEe-CCccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeE
Confidence 446778777665 456555 4554422 22223322 222345668999999999988877755554555553 22222
Q ss_pred EEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEee--ecCCCceEEeEEeCCCCEEEEEEeC
Q psy14130 254 ISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALET--VDSSSGVLFPYYDHDTRILFLAGKG 331 (494)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~g~~ 331 (494)
+. .... ..+..+.+.++ +.+++++ .+|.+++.+...+..-..... +.....+..+.+.+++..+ ++| .
T Consensus 199 ~~--~~~~-~~~~~~~~~~~-g~~~~~~----~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~-~~g-~ 268 (327)
T 2xbg_A 199 HN--RTTS-RRLHNMGFTPD-GRLWMIV----NGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVW-LAG-G 268 (327)
T ss_dssp EE--CCSS-SCEEEEEECTT-SCEEEEE----TTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEE-EEE-S
T ss_pred CC--CCCC-CccceeEECCC-CCEEEEe----CCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEE-EEe-C
Confidence 21 1222 23677777776 5777777 678877764221110000000 1122357788888877655 555 5
Q ss_pred CCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec-cceeEEEEee
Q psy14130 332 DGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ-CEIFRFFKLH 384 (494)
Q Consensus 332 dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~-~~~~~~~~l~ 384 (494)
+|.| ++....++..............+.++.|.+++.+++.+ ++ .+++.+
T Consensus 269 ~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G--~i~~~~ 319 (327)
T 2xbg_A 269 AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILGQKG--ILLRYV 319 (327)
T ss_dssp TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEECSTT--EEEEEC
T ss_pred CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCceEEEcCCc--eEEEEc
Confidence 7766 45555565533322111123467889998776666554 44 445443
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=97.28 E-value=0.019 Score=58.02 Aligned_cols=134 Identities=15% Similarity=0.145 Sum_probs=83.3
Q ss_pred EEEEEeCCCeEEEEECCCCeEEEEecCCC-------------Cce--------------------------------EEE
Q psy14130 191 VVASAGFDYLIILWDVGKGEALTVIDCHP-------------DVI--------------------------------NCL 225 (494)
Q Consensus 191 ~l~s~s~d~~v~iwd~~~~~~~~~~~~h~-------------~~v--------------------------------~~l 225 (494)
+++.++.+|.++++|..+|+.+..+.... .++ ..+
T Consensus 338 ~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~ 417 (582)
T 1flg_A 338 ATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPM 417 (582)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCC
T ss_pred EEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCc
Confidence 78889999999999999999887654321 000 134
Q ss_pred EEcCCCCEEEEEe---------------------------------CCCeEEEEeCCCCceEEEeeecCCCCceEEEEEC
Q psy14130 226 SFNRDGSRLVTTC---------------------------------KDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIG 272 (494)
Q Consensus 226 ~~~~~~~~l~s~~---------------------------------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (494)
+++|+..+++... .++.|..||+.+++.+-+....... .... ...
T Consensus 418 a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~-~~g~-~~t 495 (582)
T 1flg_A 418 AYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPL-WAGV-LAT 495 (582)
T ss_dssp EECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCC-CSCC-EEE
T ss_pred eECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCC-cccc-eEe
Confidence 6676555554432 2688999999999988776654322 1111 122
Q ss_pred CCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeC
Q psy14130 273 DTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKG 331 (494)
Q Consensus 273 ~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~ 331 (494)
.++.+ ..| +.|+.++.||.++++..-.... .......-+.|..+|+.++++.++
T Consensus 496 agglv-f~g---~~dg~l~A~D~~tG~~lW~~~~-~~g~~a~P~~y~~~G~qYv~~~~G 549 (582)
T 1flg_A 496 AGNLV-FTG---TGDGYFKAFDAKSGKELWKFQT-GSGIVSPPITWEQDGEQYLGVTVG 549 (582)
T ss_dssp TTTEE-EEE---CTTSEEEEEETTTCCEEEEEEC-SSCCCSCCEEEEETTEEEEEEEEC
T ss_pred CCCEE-EEE---CCCCcEEEEECCCCCEEEEecC-CCCcccCceEEEECCEEEEEEEcc
Confidence 33444 446 6899999999998776444332 211111225666788766455443
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.18 E-value=0.13 Score=46.88 Aligned_cols=182 Identities=14% Similarity=0.106 Sum_probs=88.9
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCC----CeEEEEECCCCeEEEE--ecCCCCc
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFD----YLIILWDVGKGEALTV--IDCHPDV 221 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d----~~v~iwd~~~~~~~~~--~~~h~~~ 221 (494)
.+.+.+||..+..-. .+..+......-.++.+ ++ .+++.|+.+ ..+.++|+.+.+-... +......
T Consensus 23 ~~~~~~~d~~~~~W~-----~~~~~p~~r~~~~~~~~--~~-~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~ 94 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWT-----DIRCPFEKRRDAACVFW--DN-VVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDS 94 (306)
T ss_dssp TTSEEEEETTTTEEE-----ECCCCSCCCBSCEEEEE--TT-EEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBS
T ss_pred CceEEEecCCCCCEe-----cCCCCCcccceeEEEEE--CC-EEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccc
Confidence 356888988776211 11111111111122222 33 577777755 5788999988753322 2211111
Q ss_pred eEEEEEcCCCCEEEEEeCC------CeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEE-ecCCC-----Cce
Q psy14130 222 INCLSFNRDGSRLVTTCKD------KTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTG-FSRHS-----DRQ 289 (494)
Q Consensus 222 v~~l~~~~~~~~l~s~~~d------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-~~~~~-----d~~ 289 (494)
...+.+ ++++++.|+.+ ..+.+||+.+.+-...-..........++.. + +.+++.| +.... -..
T Consensus 95 ~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~ 170 (306)
T 3ii7_A 95 LAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA-N-GLIYVCGGSLGNNVSGRVLNS 170 (306)
T ss_dssp CEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-T-TEEEEECCEESCTTTCEECCC
T ss_pred eeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE-C-CEEEEECCCCCCCCcccccce
Confidence 222222 67777777765 4689999998763322111111111223333 3 5666665 21111 356
Q ss_pred EEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCC-----CcEEEEEeeCCC
Q psy14130 290 VGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGD-----GNIRYYELTNER 344 (494)
Q Consensus 290 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~d-----g~i~~wd~~~~~ 344 (494)
+.+||+.+..-. ..........-..++.. ++ .|++.|+.+ ..+.+||+.+.+
T Consensus 171 ~~~yd~~~~~W~-~~~~~p~~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~~~~yd~~~~~ 227 (306)
T 3ii7_A 171 CEVYDPATETWT-ELCPMIEARKNHGLVFV-KD-KIFAVGGQNGLGGLDNVEYYDIKLNE 227 (306)
T ss_dssp EEEEETTTTEEE-EECCCSSCCBSCEEEEE-TT-EEEEECCEETTEEBCCEEEEETTTTE
T ss_pred EEEeCCCCCeEE-ECCCccchhhcceEEEE-CC-EEEEEeCCCCCCCCceEEEeeCCCCc
Confidence 889998764321 11111111111112222 44 455777654 358889988765
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.14 Score=46.61 Aligned_cols=147 Identities=13% Similarity=0.195 Sum_probs=74.5
Q ss_pred CEEEEEeCC-----CeEEEEECCCCe---EEE--EecCCCCceEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCCceE
Q psy14130 190 NVVASAGFD-----YLIILWDVGKGE---ALT--VIDCHPDVINCLSFNRDGSRLVTTCKD-----KTVRVLDPRTGLVI 254 (494)
Q Consensus 190 ~~l~s~s~d-----~~v~iwd~~~~~---~~~--~~~~h~~~v~~l~~~~~~~~l~s~~~d-----~~v~iwd~~~~~~~ 254 (494)
.+++.|+.+ ..+.++|+.+.+ -.. .+.........+.+ ++.+++.|+.+ ..+.+||+.+.+-.
T Consensus 64 ~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~ 141 (301)
T 2vpj_A 64 RIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWS 141 (301)
T ss_dssp EEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEE
T ss_pred EEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEE
Confidence 577777755 468899988765 222 22211111222222 56777777643 46899999887633
Q ss_pred EEeeecCCCCceEEEEECCCCeEEEEE-ecCC-CCceEEEEeCCCCCCceeEeeecCCC-ceEEeEEeCCCCEEEEEEeC
Q psy14130 255 SQGVCHPGTRSSKAVFIGDTGRIVTTG-FSRH-SDRQVGLWDENDLNTPLALETVDSSS-GVLFPYYDHDTRILFLAGKG 331 (494)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~l~~~g-~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~g~~ 331 (494)
..-..........++.. + +.+++.| +... .-..+.+||+.+..-. ......... ....+.+ + ..|++.|+.
T Consensus 142 ~~~~~p~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~d~~~~~W~-~~~~~p~~r~~~~~~~~--~-~~i~v~GG~ 215 (301)
T 2vpj_A 142 MLGDMQTAREGAGLVVA-S-GVIYCLGGYDGLNILNSVEKYDPHTGHWT-NVTPMATKRSGAGVALL--N-DHIYVVGGF 215 (301)
T ss_dssp EEEECSSCCBSCEEEEE-T-TEEEEECCBCSSCBCCCEEEEETTTTEEE-EECCCSSCCBSCEEEEE--T-TEEEEECCB
T ss_pred ECCCCCCCcccceEEEE-C-CEEEEECCCCCCcccceEEEEeCCCCcEE-eCCCCCcccccceEEEE--C-CEEEEEeCC
Confidence 22221121111223333 3 5676666 1100 1256889998764321 111111111 1112222 3 455577766
Q ss_pred C-----CcEEEEEeeCCC
Q psy14130 332 D-----GNIRYYELTNER 344 (494)
Q Consensus 332 d-----g~i~~wd~~~~~ 344 (494)
+ ..+.+||+.+.+
T Consensus 216 ~~~~~~~~v~~yd~~~~~ 233 (301)
T 2vpj_A 216 DGTAHLSSVEAYNIRTDS 233 (301)
T ss_dssp CSSSBCCCEEEEETTTTE
T ss_pred CCCcccceEEEEeCCCCc
Confidence 4 468899998765
|
| >2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.83 E-value=0.32 Score=45.46 Aligned_cols=150 Identities=13% Similarity=0.045 Sum_probs=81.4
Q ss_pred cEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeE--EEEec---CCCCceEEEEEcCC---CCEEEEEeC-C-----CeE
Q psy14130 178 RVGYIEWHPTAENVVASAGFDYLIILWDVGKGEA--LTVID---CHPDVINCLSFNRD---GSRLVTTCK-D-----KTV 243 (494)
Q Consensus 178 ~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~--~~~~~---~h~~~v~~l~~~~~---~~~l~s~~~-d-----~~v 243 (494)
.-..++|.|+| .++++ ..++.|++++ .++. +..+. ........|+|+|+ +..|+.+.. . ..|
T Consensus 32 ~P~~ia~~pdG-~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 32 VPWALAFLPDG-GMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp CEEEEEECTTS-CEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CceEEEEcCCC-eEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 35789999998 55555 5669999998 4442 22221 22457899999998 555544433 2 678
Q ss_pred EEEeCCCCc-----eE-EEeee--cCCCCceEEEEECCCCeEEEEEecC---------CCCceEEEEeCCCC--------
Q psy14130 244 RVLDPRTGL-----VI-SQGVC--HPGTRSSKAVFIGDTGRIVTTGFSR---------HSDRQVGLWDENDL-------- 298 (494)
Q Consensus 244 ~iwd~~~~~-----~~-~~~~~--~~~~~~~~~~~~~~~~~l~~~g~~~---------~~d~~i~iwd~~~~-------- 298 (494)
..++...+. .+ ..+.. ........++|.|++..+++.|... ...+.|.-+|....
T Consensus 108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~ 187 (352)
T 2ism_A 108 VRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFL 187 (352)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTT
T ss_pred EEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCccc
Confidence 888877542 11 11321 1111246889999864344434100 01256666665430
Q ss_pred ----CCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCC
Q psy14130 299 ----NTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDG 333 (494)
Q Consensus 299 ----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg 333 (494)
... .+... .......++|+|++..|+++-....
T Consensus 188 ~~~~~~~-~i~a~-G~rnp~g~a~d~~~g~l~v~d~g~~ 224 (352)
T 2ism_A 188 GRRGARP-EVYSL-GHRNPQGLAWHPKTGELFSSEHGPS 224 (352)
T ss_dssp TCTTSCT-TEEEE-CCSEECCCEECTTTCCEEEEEECC-
T ss_pred CCCCCCc-cEEEE-cCCCcccEEEECCCCCEEEEEcCCC
Confidence 011 11111 2344667899994444546544433
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A | Back alignment and structure |
|---|
Probab=96.81 E-value=0.24 Score=45.28 Aligned_cols=148 Identities=10% Similarity=0.071 Sum_probs=73.0
Q ss_pred CEEEEEeC----C-----CeEEEEECCCCeEEEE--ecCCCCceEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCCce
Q psy14130 190 NVVASAGF----D-----YLIILWDVGKGEALTV--IDCHPDVINCLSFNRDGSRLVTTCKD-----KTVRVLDPRTGLV 253 (494)
Q Consensus 190 ~~l~s~s~----d-----~~v~iwd~~~~~~~~~--~~~h~~~v~~l~~~~~~~~l~s~~~d-----~~v~iwd~~~~~~ 253 (494)
.+++.|+. + ..+.++|+.+.+-... +.........+.+ ++++++.|+.+ ..+.+||+.+.+-
T Consensus 72 ~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 149 (308)
T 1zgk_A 72 LLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEW 149 (308)
T ss_dssp EEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEE
T ss_pred EEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeE
Confidence 57777765 2 3688899987753221 1111111222223 56677776643 4688999988763
Q ss_pred EEEeeecCCCCceEEEEECCCCeEEEEE-ecCC-CCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeC
Q psy14130 254 ISQGVCHPGTRSSKAVFIGDTGRIVTTG-FSRH-SDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKG 331 (494)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g-~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~ 331 (494)
...-.......-..++.. + +.+++.| +... ....+.+||+.+..-. ..........-..++.. + ..|++.|+.
T Consensus 150 ~~~~~~p~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-~~~~~p~~r~~~~~~~~-~-~~iyv~GG~ 224 (308)
T 1zgk_A 150 HLVAPMLTRRIGVGVAVL-N-RLLYAVGGFDGTNRLNSAECYYPERNEWR-MITAMNTIRSGAGVCVL-H-NCIYAAGGY 224 (308)
T ss_dssp EECCCCSSCCBSCEEEEE-T-TEEEEECCBCSSCBCCCEEEEETTTTEEE-ECCCCSSCCBSCEEEEE-T-TEEEEECCB
T ss_pred eECCCCCccccceEEEEE-C-CEEEEEeCCCCCCcCceEEEEeCCCCeEe-eCCCCCCccccceEEEE-C-CEEEEEeCC
Confidence 322111111111223333 3 5666666 1110 1256889998753221 11111111111112222 3 455577766
Q ss_pred C-----CcEEEEEeeCCC
Q psy14130 332 D-----GNIRYYELTNER 344 (494)
Q Consensus 332 d-----g~i~~wd~~~~~ 344 (494)
+ ..+.+||+.+.+
T Consensus 225 ~~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 225 DGQDQLNSVERYDVETET 242 (308)
T ss_dssp CSSSBCCCEEEEETTTTE
T ss_pred CCCCccceEEEEeCCCCc
Confidence 4 458899988765
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.67 E-value=0.16 Score=46.08 Aligned_cols=181 Identities=12% Similarity=0.081 Sum_probs=87.2
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCC-----CeEEEEECCCCeEEE--EecCCCCc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFD-----YLIILWDVGKGEALT--VIDCHPDV 221 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d-----~~v~iwd~~~~~~~~--~~~~h~~~ 221 (494)
+.+.+||..+.... .. ..+..+......-.++.. ++ .+++.|+.+ ..+.++|+.+.+-.. .+......
T Consensus 78 ~~~~~~d~~~~~~~-~W-~~~~~~p~~r~~~~~~~~--~~-~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~ 152 (301)
T 2vpj_A 78 SSVECLDYTADEDG-VW-YSVAPMNVRRGLAGATTL--GD-MIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREG 152 (301)
T ss_dssp CCEEEEETTCCTTC-CC-EEECCCSSCCBSCEEEEE--TT-EEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBS
T ss_pred ceEEEEECCCCCCC-ee-EECCCCCCCccceeEEEE--CC-EEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCccc
Confidence 45889998776400 00 111111111111122222 34 577777654 368899998775332 22211111
Q ss_pred eEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCC-----CceEE
Q psy14130 222 INCLSFNRDGSRLVTTCKD-----KTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHS-----DRQVG 291 (494)
Q Consensus 222 v~~l~~~~~~~~l~s~~~d-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~-----d~~i~ 291 (494)
-..+.+ ++++++.|+.+ ..+.+||+.+.+-...-..........++.. + +.+++.| +. ...+.
T Consensus 153 ~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~-~~i~v~G---G~~~~~~~~~v~ 225 (301)
T 2vpj_A 153 AGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL-N-DHIYVVG---GFDGTAHLSSVE 225 (301)
T ss_dssp CEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-T-TEEEEEC---CBCSSSBCCCEE
T ss_pred ceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE-C-CEEEEEe---CCCCCcccceEE
Confidence 122222 67777777654 4689999988763322111111111223333 3 5677766 33 35789
Q ss_pred EEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCC-----CcEEEEEeeCCC
Q psy14130 292 LWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGD-----GNIRYYELTNER 344 (494)
Q Consensus 292 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~d-----g~i~~wd~~~~~ 344 (494)
+||+.+..-. .+........-..++. .+++ |++.|+.+ ..|.+||..+.+
T Consensus 226 ~yd~~~~~W~-~~~~~p~~r~~~~~~~-~~~~-i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 226 AYNIRTDSWT-TVTSMTTPRCYVGATV-LRGR-LYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp EEETTTTEEE-EECCCSSCCBSCEEEE-ETTE-EEEECCBCSSSBEEEEEEEETTTTE
T ss_pred EEeCCCCcEE-ECCCCCCcccceeEEE-ECCE-EEEEcCcCCCcccccEEEEcCCCCe
Confidence 9998764321 1111111111111222 2444 55777655 346778877654
|
| >3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A* | Back alignment and structure |
|---|
Probab=96.66 E-value=0.28 Score=45.70 Aligned_cols=179 Identities=9% Similarity=-0.002 Sum_probs=101.0
Q ss_pred CcEEEEEcCCCCCCCCcccceEeccc-----ccccEEEEEEcC--CCCCEEEEE-eC--CCeEEEEECCCC--e--EEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHG-----HKRRVGYIEWHP--TAENVVASA-GF--DYLIILWDVGKG--E--ALTV 214 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~-----h~~~V~~~~~~p--~~~~~l~s~-s~--d~~v~iwd~~~~--~--~~~~ 214 (494)
+.|.++|..+.... . +.+ .+.+ ..-....+.+.+ ++...|+.+ .. +.+|.+|++..+ . .+..
T Consensus 83 G~I~~~d~~~~~~~--~-~~l-~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~ 158 (355)
T 3sre_A 83 GKILLMDLNEKEPA--V-SEL-EIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKT 158 (355)
T ss_dssp CEEEEEETTSSSCC--E-EEC-EEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEE
T ss_pred CeEEEEecCCCCCc--e-EEE-EccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEec
Confidence 46888887643211 0 111 1222 233556677655 342234444 33 467888876543 2 2334
Q ss_pred ecCC-CCceEEEEEcCCCCEEEEEeC-----------------CCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCe
Q psy14130 215 IDCH-PDVINCLSFNRDGSRLVTTCK-----------------DKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGR 276 (494)
Q Consensus 215 ~~~h-~~~v~~l~~~~~~~~l~s~~~-----------------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (494)
+.+. -...+.+.+.++|++.++... .+.|.-+|.. +.......- .. .+.++|+|++..
T Consensus 159 ~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~~~~~~l-~~-pNGia~spDg~~ 234 (355)
T 3sre_A 159 IRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVRVVAEGF-DF-ANGINISPDGKY 234 (355)
T ss_dssp ECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCEEEEEEE-SS-EEEEEECTTSSE
T ss_pred cccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEEEeecCC-cc-cCcceECCCCCE
Confidence 4432 245789999999998877641 2456666653 322222222 22 689999999888
Q ss_pred EEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeC-CCCEEEEEEeCC-CcEEEEE
Q psy14130 277 IVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDH-DTRILFLAGKGD-GNIRYYE 339 (494)
Q Consensus 277 l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~g~~d-g~i~~wd 339 (494)
++++- +..+.|..||+...........+......-.+++++ +|+.. +++..+ +.|..|+
T Consensus 235 lYvad---t~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lw-va~~~~g~~v~~~~ 295 (355)
T 3sre_A 235 VYIAE---LLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLW-VGCHPNGMRIFFYD 295 (355)
T ss_dssp EEEEE---GGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEE-EEEESCHHHHHSCC
T ss_pred EEEEe---CCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEE-EEecCCceEEEEEC
Confidence 88887 678999999986432222222222334566788888 58776 544322 3444443
|
| >3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=96.57 E-value=0.18 Score=46.87 Aligned_cols=158 Identities=14% Similarity=0.089 Sum_probs=86.5
Q ss_pred EEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceE--EEee---ecCCCCceEEEEECC---CCeEEEEEecC
Q psy14130 213 TVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVI--SQGV---CHPGTRSSKAVFIGD---TGRIVTTGFSR 284 (494)
Q Consensus 213 ~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~--~~~~---~~~~~~~~~~~~~~~---~~~l~~~g~~~ 284 (494)
..+...-.....|+|.|+|+++++--..|+|++++...++.. ..+. .........++++|+ ++.++++ |+.
T Consensus 25 ~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~-yt~ 103 (347)
T 3das_A 25 RTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAY-FTS 103 (347)
T ss_dssp EEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEE-EEC
T ss_pred EEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEE-Eec
Confidence 334444567789999999997776655899999987766532 1111 111222678999985 4555553 332
Q ss_pred CCCceEEEEeCCCCC-------Cce-eEeeec--CCCceEEeEEeCCCCEEEEEEe------------CCCcEEEEEeeC
Q psy14130 285 HSDRQVGLWDENDLN-------TPL-ALETVD--SSSGVLFPYYDHDTRILFLAGK------------GDGNIRYYELTN 342 (494)
Q Consensus 285 ~~d~~i~iwd~~~~~-------~~~-~~~~~~--~~~~v~~~~~~~~~~~l~~~g~------------~dg~i~~wd~~~ 342 (494)
..+..|.-|.+.... ... .+..+. .......+.|.|||.+++.+|. .-|.|.-.+...
T Consensus 104 ~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG 183 (347)
T 3das_A 104 ASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDG 183 (347)
T ss_dssp SSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTS
T ss_pred CCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCC
Confidence 345566666654311 111 111221 1223456899999976633342 134554444432
Q ss_pred C----Cce---EEecccccCCCCeeEEEEecCCceeeec
Q psy14130 343 E----RPY---IHFLNQSLSGAPQRGLGFMPKRGCDVTQ 374 (494)
Q Consensus 343 ~----~~~---~~~~~~~~~~~~v~~~~~~p~~~~~~~~ 374 (494)
. .++ ..+...+ ....+++|.|++.+.++.
T Consensus 184 ~ip~~nPf~~~~i~a~G~---RNp~Gla~dp~G~L~~~d 219 (347)
T 3das_A 184 EPAPGNPFPGSPVYSYGH---RNVQGLAWDDKQRLFASE 219 (347)
T ss_dssp SBCTTCSSTTCCEEEBCC---SBCCEEEECTTCCEEEEE
T ss_pred CccCCCCCCCCeEEeeCC---CCcceEEECCCCCEEEEe
Confidence 2 000 0111111 235689999988776664
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.45 Score=43.48 Aligned_cols=183 Identities=11% Similarity=0.063 Sum_probs=87.1
Q ss_pred EEEEcCcEEEEEcCCCCCCCCcccce-EecccccccEEEEEEcCCCCCEEEEEeC-----C------CeEEEEECCCCeE
Q psy14130 144 LVLPIHRVKLWYIPDGGLSGNLNEWI-MDLHGHKRRVGYIEWHPTAENVVASAGF-----D------YLIILWDVGKGEA 211 (494)
Q Consensus 144 ~~~~~~~v~iw~~~~~~~~~~~~~~~-~~~~~h~~~V~~~~~~p~~~~~l~s~s~-----d------~~v~iwd~~~~~~ 211 (494)
++.+.+.+.+||..++. .. ..+..............++ .+++.|+. . ..+.++|+.+.+-
T Consensus 8 ~~~GG~~~~~yd~~~~~-------W~~~~~~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W 79 (315)
T 4asc_A 8 FMISEEGAVAYDPAANE-------CYCASLSSQVPKNHVSLVTKEN-QVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEW 79 (315)
T ss_dssp EEEETTEEEEEETTTTE-------EEEEECCCCSCSSEEEEECTTC-CEEEEEEEEECSSCSSSCEEEEEEEEETTTTEE
T ss_pred EEEcCCceEEECCCCCe-------EecCCCCCCCCccceEEEEECC-EEEEEcCcccCCCCCccccccceEEecCCCCeE
Confidence 33344578889988762 21 1222111222222233344 67777773 1 1377889887753
Q ss_pred EEEecCCCCc-e-EEEEEcCCCCEEEEEeCC--------CeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEE
Q psy14130 212 LTVIDCHPDV-I-NCLSFNRDGSRLVTTCKD--------KTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTG 281 (494)
Q Consensus 212 ~~~~~~h~~~-v-~~l~~~~~~~~l~s~~~d--------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 281 (494)
.. +.....+ . .+++.. ++.+++.|+.+ ..+.+||+.+.+-...-.......-..++. -+ +.+++.|
T Consensus 80 ~~-~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~-~~iyv~G 155 (315)
T 4asc_A 80 LG-MPPLPSPRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS-HM-DLVYVIG 155 (315)
T ss_dssp EE-CCCBSSCEESCEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ET-TEEEEEC
T ss_pred EE-CCCCCcchhceeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE-EC-CEEEEEe
Confidence 22 2111111 0 112222 56666776632 458999998876322111111111122333 23 5666666
Q ss_pred ecCCC------CceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCC-----cEEEEEeeCCC
Q psy14130 282 FSRHS------DRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDG-----NIRYYELTNER 344 (494)
Q Consensus 282 ~~~~~------d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg-----~i~~wd~~~~~ 344 (494)
+. -..+.+||+.+..-. ..........-..++. -++ .|++.|+.++ .+.+||+.+.+
T Consensus 156 ---G~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 156 ---GKGSDRKCLNKMCVYDPKKFEWK-ELAPMQTARSLFGATV-HDG-RIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp ---CBCTTSCBCCCEEEEETTTTEEE-ECCCCSSCCBSCEEEE-ETT-EEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred ---CCCCCCcccceEEEEeCCCCeEE-ECCCCCCchhceEEEE-ECC-EEEEEeccCCCCccceEEEEECCCCe
Confidence 22 246889998764211 1111111111111111 244 4557777654 47888887765
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.38 E-value=0.2 Score=45.68 Aligned_cols=147 Identities=16% Similarity=0.146 Sum_probs=73.2
Q ss_pred CEEEEEeCC------CeEEEEECCCCeEEEE--ecCCCCceEEEEEcCCCCEEEEEeC---------CCeEEEEeCCCCc
Q psy14130 190 NVVASAGFD------YLIILWDVGKGEALTV--IDCHPDVINCLSFNRDGSRLVTTCK---------DKTVRVLDPRTGL 252 (494)
Q Consensus 190 ~~l~s~s~d------~~v~iwd~~~~~~~~~--~~~h~~~v~~l~~~~~~~~l~s~~~---------d~~v~iwd~~~~~ 252 (494)
.+++.|+.+ ..+.+||+.+.+-... +......-..+.+ ++++++.|+. -..+.+||+.+.+
T Consensus 103 ~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~ 180 (306)
T 3ii7_A 103 KIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPATET 180 (306)
T ss_dssp EEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTTTE
T ss_pred EEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCCCe
Confidence 577777765 4688999988763322 1111111122222 5666666653 3458899998876
Q ss_pred eEEEeeecCCCCceEEEEECCCCeEEEEE-ecCC-CCceEEEEeCCCCCCceeEeeecCC-CceEEeEEeCCCCEEEEEE
Q psy14130 253 VISQGVCHPGTRSSKAVFIGDTGRIVTTG-FSRH-SDRQVGLWDENDLNTPLALETVDSS-SGVLFPYYDHDTRILFLAG 329 (494)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~g 329 (494)
-...-..........++.. + +++++.| ++.. .-..+.+||+.+..-. .+...... .....+.+ + ..|++.|
T Consensus 181 W~~~~~~p~~r~~~~~~~~-~-~~i~v~GG~~~~~~~~~~~~yd~~~~~W~-~~~~~p~~r~~~~~~~~--~-~~i~v~G 254 (306)
T 3ii7_A 181 WTELCPMIEARKNHGLVFV-K-DKIFAVGGQNGLGGLDNVEYYDIKLNEWK-MVSPMPWKGVTVKCAAV--G-SIVYVLA 254 (306)
T ss_dssp EEEECCCSSCCBSCEEEEE-T-TEEEEECCEETTEEBCCEEEEETTTTEEE-ECCCCSCCBSCCEEEEE--T-TEEEEEE
T ss_pred EEECCCccchhhcceEEEE-C-CEEEEEeCCCCCCCCceEEEeeCCCCcEE-ECCCCCCCccceeEEEE--C-CEEEEEe
Confidence 3222111111112233333 3 5676665 1100 1246889998763211 11111111 11122222 3 4455777
Q ss_pred eCC-----CcEEEEEeeCCC
Q psy14130 330 KGD-----GNIRYYELTNER 344 (494)
Q Consensus 330 ~~d-----g~i~~wd~~~~~ 344 (494)
+.+ ..+.+||..+.+
T Consensus 255 G~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 255 GFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp CBCSSSBCCEEEEEETTTTE
T ss_pred CcCCCeeeeeEEEEcCCCCe
Confidence 754 457888887764
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.38 E-value=0.55 Score=42.55 Aligned_cols=145 Identities=14% Similarity=0.206 Sum_probs=72.9
Q ss_pred CEEEEEeCCC-----eEEEEECCCCeEEEE--ecCCCCceEEEEEcCCCCEEEEEeCC-------CeEEEEeCCCCceEE
Q psy14130 190 NVVASAGFDY-----LIILWDVGKGEALTV--IDCHPDVINCLSFNRDGSRLVTTCKD-------KTVRVLDPRTGLVIS 255 (494)
Q Consensus 190 ~~l~s~s~d~-----~v~iwd~~~~~~~~~--~~~h~~~v~~l~~~~~~~~l~s~~~d-------~~v~iwd~~~~~~~~ 255 (494)
.+++.|+.++ .+.+||+.+.+-... +.........+.+ ++++++.|+.+ ..+.+||+.+.+-..
T Consensus 110 ~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~ 187 (302)
T 2xn4_A 110 LLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEWTY 187 (302)
T ss_dssp EEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEEEE
T ss_pred EEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEE
Confidence 5777777553 578899887753322 2111111122222 56666666542 458899998876332
Q ss_pred EeeecCCCCceEEEEECCCCeEEEEEecCCC-----CceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEe
Q psy14130 256 QGVCHPGTRSSKAVFIGDTGRIVTTGFSRHS-----DRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGK 330 (494)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~-----d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~ 330 (494)
.-..........++.. + +.+++.| +. ...+.+||+.+..-. .+........-..++. .++ .|++.|+
T Consensus 188 ~~~~p~~r~~~~~~~~-~-~~iyv~G---G~~~~~~~~~~~~yd~~~~~W~-~~~~~~~~r~~~~~~~-~~~-~i~v~GG 259 (302)
T 2xn4_A 188 IAEMSTRRSGAGVGVL-N-NLLYAVG---GHDGPLVRKSVEVYDPTTNAWR-QVADMNMCRRNAGVCA-VNG-LLYVVGG 259 (302)
T ss_dssp ECCCSSCCBSCEEEEE-T-TEEEEEC---CBSSSSBCCCEEEEETTTTEEE-EECCCSSCCBSCEEEE-ETT-EEEEECC
T ss_pred CCCCccccccccEEEE-C-CEEEEEC---CCCCCcccceEEEEeCCCCCEe-eCCCCCCccccCeEEE-ECC-EEEEECC
Confidence 2111111111223333 3 5677766 33 246889998764321 1111111111111112 244 4557776
Q ss_pred CCC-----cEEEEEeeCCC
Q psy14130 331 GDG-----NIRYYELTNER 344 (494)
Q Consensus 331 ~dg-----~i~~wd~~~~~ 344 (494)
.++ .+.+||..+.+
T Consensus 260 ~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 260 DDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp BCSSSBCCCEEEEETTTTE
T ss_pred cCCCcccccEEEEcCCCCe
Confidence 553 48889988765
|
| >2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} | Back alignment and structure |
|---|
Probab=96.35 E-value=0.63 Score=42.89 Aligned_cols=155 Identities=10% Similarity=0.061 Sum_probs=87.2
Q ss_pred ccccccEEEEEEcCCCCCEEEEEeCCCeEEEEEC--CCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy14130 173 HGHKRRVGYIEWHPTAENVVASAGFDYLIILWDV--GKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRT 250 (494)
Q Consensus 173 ~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~--~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~ 250 (494)
.++...+..+.+.+++ .+++.+...+..+-+|- .+-+.+. ......+..+.+.+++..++ ++.+|.+++.+...
T Consensus 159 ~~~~~~~~~~~~~~~~-~~~~~g~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~ 234 (327)
T 2xbg_A 159 QEAIGVMRNLNRSPSG-EYVAVSSRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDN 234 (327)
T ss_dssp CSCCCCEEEEEECTTS-CEEEEETTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEEE-EETTTEEEEEETTE
T ss_pred cCCCcceEEEEEcCCC-cEEEEECCCcEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEEE-EeCCceEEEecCCC
Confidence 3455678999999987 57766654444444453 2223332 23556789999999887654 55678887764333
Q ss_pred CceEEEeeec---CCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee-cCCCceEEeEEeCCCCEEE
Q psy14130 251 GLVISQGVCH---PGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV-DSSSGVLFPYYDHDTRILF 326 (494)
Q Consensus 251 ~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~ 326 (494)
++.-..+... ....+..+.+.++ +.++++| .++.|. +....+..-...... .....+..+.|.+++. +
T Consensus 235 G~tW~~~~~~~~~~~~~~~~v~~~~~-~~~~~~g----~~g~i~-~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~- 306 (327)
T 2xbg_A 235 SENWGELLSPLRRNSVGFLDLAYRTP-NEVWLAG----GAGALL-CSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-G- 306 (327)
T ss_dssp EEEECCCBCTTSSCCSCEEEEEESSS-SCEEEEE----STTCEE-EESSTTSSCEECGGGTTSSSCCCEEEEEETTE-E-
T ss_pred CCeeEeccCCcccCCcceEEEEecCC-CEEEEEe----CCCeEE-EeCCCCcccEEcCccCCCCCCeEEEEEECCCc-e-
Confidence 4332222211 1122567777765 6788888 567663 333333221111111 1234567787875544 4
Q ss_pred EEEeCCCcEEEEE
Q psy14130 327 LAGKGDGNIRYYE 339 (494)
Q Consensus 327 ~~g~~dg~i~~wd 339 (494)
++++.+|.|.-++
T Consensus 307 ~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 307 FILGQKGILLRYV 319 (327)
T ss_dssp EEECSTTEEEEEC
T ss_pred EEEcCCceEEEEc
Confidence 3445788776655
|
| >3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A* | Back alignment and structure |
|---|
Probab=96.33 E-value=0.69 Score=43.22 Aligned_cols=148 Identities=9% Similarity=-0.060 Sum_probs=79.5
Q ss_pred cEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe-EEEEec---CCCCceEEEEEcCC---CCEEEEEeC----C----Ce
Q psy14130 178 RVGYIEWHPTAENVVASAGFDYLIILWDVGKGE-ALTVID---CHPDVINCLSFNRD---GSRLVTTCK----D----KT 242 (494)
Q Consensus 178 ~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~-~~~~~~---~h~~~v~~l~~~~~---~~~l~s~~~----d----~~ 242 (494)
....|+|.|+| .+++ +..++.|+++|. .++ .+..+. ........|+++|+ +..|+.+.. + ..
T Consensus 30 ~P~~ia~~pdG-~l~V-~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 30 VPWSIAPLGGG-RYLV-TERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp CEEEEEEEETT-EEEE-EETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCeEEEEcCCC-eEEE-EeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 45789999998 4544 556699999974 454 222221 22356899999997 444444332 3 57
Q ss_pred EEEEeCCCC--c-----eE-EEeeecCCCCceEEEEECCCCeEEEEEecC---------CCCceEEEEeCCCCC---C--
Q psy14130 243 VRVLDPRTG--L-----VI-SQGVCHPGTRSSKAVFIGDTGRIVTTGFSR---------HSDRQVGLWDENDLN---T-- 300 (494)
Q Consensus 243 v~iwd~~~~--~-----~~-~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~---------~~d~~i~iwd~~~~~---~-- 300 (494)
|..|+...+ . .+ ..+..........++|.|++..+++.|-.. ...+.|.-++....- .
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf 186 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPF 186 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSS
T ss_pred EEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCC
Confidence 778887654 1 11 122211111246789999864444444100 012456666654310 0
Q ss_pred -ceeEeeecCCCceEEeEEeCCCCEEEEEE
Q psy14130 301 -PLALETVDSSSGVLFPYYDHDTRILFLAG 329 (494)
Q Consensus 301 -~~~~~~~~~~~~v~~~~~~~~~~~l~~~g 329 (494)
...+... .......++|+|+...|+++-
T Consensus 187 ~~~~i~a~-G~rnp~Gla~d~~~g~l~v~d 215 (354)
T 3a9g_A 187 PNSPIWSY-GHRNPQGIDWHRASGVMVATE 215 (354)
T ss_dssp TTCCEEEE-CCSCCCEEEECTTTCCEEEEE
T ss_pred CCCcEEEE-ccCCcceEEEeCCCCCEEEEe
Confidence 0112222 234456789999444454654
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.09 E-value=0.78 Score=41.52 Aligned_cols=148 Identities=14% Similarity=0.148 Sum_probs=74.0
Q ss_pred CEEEEEeCC-----CeEEEEECCCCeEEEE--ecCCCCceEEEEEcCCCCEEEEEeCCC-----eEEEEeCCCCceEEEe
Q psy14130 190 NVVASAGFD-----YLIILWDVGKGEALTV--IDCHPDVINCLSFNRDGSRLVTTCKDK-----TVRVLDPRTGLVISQG 257 (494)
Q Consensus 190 ~~l~s~s~d-----~~v~iwd~~~~~~~~~--~~~h~~~v~~l~~~~~~~~l~s~~~d~-----~v~iwd~~~~~~~~~~ 257 (494)
.+++.|+.+ ..+.++|+.+.+-... +.........+.+ ++.+++.|+.++ .+.+||+.+.+-...-
T Consensus 63 ~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 140 (302)
T 2xn4_A 63 LVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVA 140 (302)
T ss_dssp EEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEEC
T ss_pred EEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeecC
Confidence 577777754 3588999987753322 2211111222222 567777777553 5889999887633221
Q ss_pred eecCCCCceEEEEECCCCeEEEEE-ecCCC---CceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCC-
Q psy14130 258 VCHPGTRSSKAVFIGDTGRIVTTG-FSRHS---DRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGD- 332 (494)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~l~~~g-~~~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~d- 332 (494)
..........++.. + +.+++.| +.... -..+.+||+.+..-. ..........-.+++. .+ ..|++.|+.+
T Consensus 141 ~~p~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~~r~~~~~~~-~~-~~iyv~GG~~~ 215 (302)
T 2xn4_A 141 PMNTRRSSVGVGVV-G-GLLYAVGGYDVASRQCLSTVECYNATTNEWT-YIAEMSTRRSGAGVGV-LN-NLLYAVGGHDG 215 (302)
T ss_dssp CCSSCCBSCEEEEE-T-TEEEEECCEETTTTEECCCEEEEETTTTEEE-EECCCSSCCBSCEEEE-ET-TEEEEECCBSS
T ss_pred CCCCcccCceEEEE-C-CEEEEEeCCCCCCCccccEEEEEeCCCCcEE-ECCCCccccccccEEE-EC-CEEEEECCCCC
Confidence 11111111223333 3 5666665 21111 345889998764321 1111111111111222 13 4555777654
Q ss_pred ----CcEEEEEeeCCC
Q psy14130 333 ----GNIRYYELTNER 344 (494)
Q Consensus 333 ----g~i~~wd~~~~~ 344 (494)
..+.+||+.+.+
T Consensus 216 ~~~~~~~~~yd~~~~~ 231 (302)
T 2xn4_A 216 PLVRKSVEVYDPTTNA 231 (302)
T ss_dssp SSBCCCEEEEETTTTE
T ss_pred CcccceEEEEeCCCCC
Confidence 368899988765
|
| >3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A | Back alignment and structure |
|---|
Probab=96.08 E-value=0.97 Score=42.83 Aligned_cols=157 Identities=13% Similarity=0.100 Sum_probs=89.4
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceEEEeeec---CCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCC-Cc----
Q psy14130 230 DGSRLVTTCKDKTVRVLDPRTGLVISQGVCH---PGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLN-TP---- 301 (494)
Q Consensus 230 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~-~~---- 301 (494)
+|..++.+- ++.||.-++.....-+.+... .-..+..+..+|++ .+++.- .+.+|.|-.+.... ..
T Consensus 31 n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG-~lLAl~----g~~~V~Vv~LP~~~~~~~~~~ 104 (452)
T 3pbp_A 31 NGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSG-DLLCLF----NDNEIFVMEVPWGYSNVEDVS 104 (452)
T ss_dssp TTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTS-SEEEEE----CSSEEEEEECCTTCSCCCCHH
T ss_pred CCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCC-CEEEEe----cCCeEEEEEecCccccCcccc
Confidence 444444443 467777777644433333332 12137788889985 555554 48899999987321 11
Q ss_pred ----ee--Eeeec-----CCCceEEeEEeCCC---CEEEEEEeCCCcEEEEEeeCC--CceEEeccc----cc---CCCC
Q psy14130 302 ----LA--LETVD-----SSSGVLFPYYDHDT---RILFLAGKGDGNIRYYELTNE--RPYIHFLNQ----SL---SGAP 358 (494)
Q Consensus 302 ----~~--~~~~~-----~~~~v~~~~~~~~~---~~l~~~g~~dg~i~~wd~~~~--~~~~~~~~~----~~---~~~~ 358 (494)
.. ...++ ...+|..+.|+|-+ ..| ++-..|+.|++||+... +|. .+.. +. ....
T Consensus 105 ~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~L-VVLtsD~~Ir~yDl~~s~~~P~--~L~k~~~~fg~d~~~~e 181 (452)
T 3pbp_A 105 IQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCI-VVLKEDDTITMFDILNSQEKPI--VLNKPNNSFGLDARVND 181 (452)
T ss_dssp HHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEE-EEEETTSCEEEEETTCTTSCCE--EESCCCSEEESCSSCCC
T ss_pred cccccceeEEEcCCcccCCCCceeEEEeccccCCCCeE-EEEecCCEEEEEEcccCCCCCc--chhccccccCCCcccce
Confidence 11 11221 24679999999964 456 67779999999999863 232 1211 10 1156
Q ss_pred eeEEEEecCCceeee--ccceeEEEEeeCCCCeEEEeEEEeeC
Q psy14130 359 QRGLGFMPKRGCDVT--QCEIFRFFKLHTTRNMCEPISMIVPR 399 (494)
Q Consensus 359 v~~~~~~p~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~pr 399 (494)
|.+++|.+++..+-. ..+...+|.+-. +-|-...+|+
T Consensus 182 v~S~~Fg~~~lTLYvl~~t~~GDIYAlcP----~LP~~~~~~~ 220 (452)
T 3pbp_A 182 ITDLEFSKDGLTLYCLNTTEGGDIFAFYP----FLPSVLLLNE 220 (452)
T ss_dssp EEEEEECTTSSCEEEEECTTSCEEEEESS----CCCSEEECCH
T ss_pred EEEEEEcCCCcEEEEEecCCCCCEEEECC----CCccccccCH
Confidence 888999987654333 334445555543 3333444444
|
| >1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1 | Back alignment and structure |
|---|
Probab=96.01 E-value=1.1 Score=42.56 Aligned_cols=201 Identities=13% Similarity=0.127 Sum_probs=121.0
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCC-CeEEEEecCC----CCceE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGK-GEALTVIDCH----PDVIN 223 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~-~~~~~~~~~h----~~~v~ 223 (494)
..+.|+|+++. ..+....-. ..|.-=.|-.. +.|+-.+ +..|+-|++.. ..++..+..| ...|.
T Consensus 86 ~~lQiFnle~K-------~klks~~~~-e~VvfWkWis~--~~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QII 154 (494)
T 1bpo_A 86 KTLQIFNIEMK-------SKMKAHTMT-DDVTFWKWISL--NTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQII 154 (494)
T ss_dssp TEEEEEETTTT-------EEEEEEECS-SCCCEEEEEET--TEEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEE
T ss_pred CeEEEEchHHh-------hhhcceecC-CCceEEEecCC--CeEEEEc-CCeeEEecccCCCCchhheecchhcccceEE
Confidence 37999999987 444444433 34555556444 3455554 46899999964 3566677655 35677
Q ss_pred EEEEcCCCCEEEEEe-------CCCeEEEEeCCCCceEEEeeecCCCCceEEEEE--CCCCeEEEEEecCCCCceEEEEe
Q psy14130 224 CLSFNRDGSRLVTTC-------KDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFI--GDTGRIVTTGFSRHSDRQVGLWD 294 (494)
Q Consensus 224 ~l~~~~~~~~l~s~~-------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~g~~~~~d~~i~iwd 294 (494)
.-..+++.++++..+ -.|.+.+|..+.+ ..+.+.+|... ...+... +....+++.+......+.++|-+
T Consensus 155 nY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~-F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~E 232 (494)
T 1bpo_A 155 NYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAAS-FAQFKMEGNAEESTLFCFAVRGQAGGKLHIIE 232 (494)
T ss_dssp EEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEEE-EEEEECTTCSSEEEEEEEEECSTTCCEEEEEE
T ss_pred EEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchheeeeee-eEEEecCCCCCCceEEEEEEecCCCcEEEEEE
Confidence 888888999776443 2478899998754 46677787543 2222111 11124666663222347899999
Q ss_pred CCCC---CCceeEeee----c---CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEE
Q psy14130 295 ENDL---NTPLALETV----D---SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGF 364 (494)
Q Consensus 295 ~~~~---~~~~~~~~~----~---~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~ 364 (494)
+... ..+...... . ...-..++..++.-..+|+.. .-|.|++||+.++.++..- .. +..+|-..+-
T Consensus 233 i~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviT-K~G~i~lyDleTgt~i~~n--rI-s~~~iF~t~~ 308 (494)
T 1bpo_A 233 VGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLIT-KYGYIHLYDLETGTCIYMN--RI-SGETIFVTAP 308 (494)
T ss_dssp CSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEE-TTSEEEEEETTTCCEEEEE--EC-CSSCEEEEEE
T ss_pred cCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEe-cCceEEEEecccceeeeee--cc-cCCceEEecc
Confidence 8543 112211111 1 123356678888888886654 7899999999999875432 22 2445544444
Q ss_pred ec
Q psy14130 365 MP 366 (494)
Q Consensus 365 ~p 366 (494)
..
T Consensus 309 ~~ 310 (494)
T 1bpo_A 309 HE 310 (494)
T ss_dssp ET
T ss_pred cC
Confidence 33
|
| >1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A | Back alignment and structure |
|---|
Probab=95.95 E-value=0.71 Score=44.80 Aligned_cols=111 Identities=15% Similarity=0.105 Sum_probs=61.9
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceE--EEeee-----cCCCCceEEEEECC---CCeEEEEEecC----
Q psy14130 219 PDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVI--SQGVC-----HPGTRSSKAVFIGD---TGRIVTTGFSR---- 284 (494)
Q Consensus 219 ~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~--~~~~~-----~~~~~~~~~~~~~~---~~~l~~~g~~~---- 284 (494)
-....+|+|.|+|+++++-...+.|++++..+++.. ..+.. ........++++|+ ++.++++-...
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 346679999999997776544457999987666532 22211 01112568999986 57776664100
Q ss_pred -CC----CceEEEEeCCCCCC----c-eeEeeec--CCCceEEeEEeCCCCEEEEEE
Q psy14130 285 -HS----DRQVGLWDENDLNT----P-LALETVD--SSSGVLFPYYDHDTRILFLAG 329 (494)
Q Consensus 285 -~~----d~~i~iwd~~~~~~----~-~~~~~~~--~~~~v~~~~~~~~~~~l~~~g 329 (494)
.. ...|.-|+...... . ..+..+. .......++|.|||.+++.+|
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 00 23555565432211 1 1111121 123467899999998664444
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=95.86 E-value=1.3 Score=48.58 Aligned_cols=183 Identities=12% Similarity=0.148 Sum_probs=108.9
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCC-CeEEEEecCC----CCceEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGK-GEALTVIDCH----PDVINC 224 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~-~~~~~~~~~h----~~~v~~ 224 (494)
++.|+|+.+. ..+....- ...|.-=.|-... .|+-.+ +..|.-|++.. ..++..+..| ...|..
T Consensus 87 ~lQiFnl~~k-------~klks~~~-~e~VvfWkWis~~--~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIin 155 (1630)
T 1xi4_A 87 TLQIFNIEMK-------SKMKAHTM-TDDVTFWKWISLN--TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIIN 155 (1630)
T ss_pred eEEEeehHHh-------hhhccccc-CCCceEEEecCCC--eeEEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEE
Confidence 7999999887 33333332 2345555665442 344443 45799999964 3455555544 456777
Q ss_pred EEEcCCCCEEEEEe-------CCCeEEEEeCCCCceEEEeeecCCCCceEEEEE--CCCCeEEEEEecCCCCceEEEEeC
Q psy14130 225 LSFNRDGSRLVTTC-------KDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFI--GDTGRIVTTGFSRHSDRQVGLWDE 295 (494)
Q Consensus 225 l~~~~~~~~l~s~~-------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~g~~~~~d~~i~iwd~ 295 (494)
-.-+++.++++..+ -.|.+.+|..+.+ ..+.+.+|... ....... +....+++.+......+.++|-++
T Consensus 156 Y~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~iegha~~-F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei 233 (1630)
T 1xi4_A 156 YRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAAS-FAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEV 233 (1630)
T ss_pred eeeCCCCCeEEEEeeccCCCcccceeeeeecccc-cchhhhHhHhh-hheeccCCCCCCceEEEEEEecCCCceEEEEec
Confidence 78888888776443 3588999988754 35566777654 3222221 222356665522223478999998
Q ss_pred CCC---CCceeEee----ec---CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCce
Q psy14130 296 NDL---NTPLALET----VD---SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPY 346 (494)
Q Consensus 296 ~~~---~~~~~~~~----~~---~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~ 346 (494)
... ..+..... +. ...-..++..++.-..+|+. +.-|.|++||+.++.++
T Consensus 234 ~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~i-tk~G~~~~~d~~t~~~i 293 (1630)
T 1xi4_A 234 GTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLI-TKYGYIHLYDLETGTCI 293 (1630)
T ss_pred CCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEE-ecCceEEEEecccchhh
Confidence 543 11111110 01 11224556777777777555 47899999999999864
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=95.75 E-value=1.2 Score=40.75 Aligned_cols=181 Identities=12% Similarity=0.104 Sum_probs=83.7
Q ss_pred CcEEEEEcCCCCCCCCcccceE-ecccccccEEEEEEcCCCCCEEEEEeC----CC-------eEEEEECCCCeEEEE--
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIM-DLHGHKRRVGYIEWHPTAENVVASAGF----DY-------LIILWDVGKGEALTV-- 214 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~-~~~~h~~~V~~~~~~p~~~~~l~s~s~----d~-------~v~iwd~~~~~~~~~-- 214 (494)
..+..||..+.. ... .+..............++ .+++.|+. ++ .+.++|+.+.+-...
T Consensus 24 ~~~~~yd~~~~~-------W~~~~~~~~~~r~~~~~~~~~~-~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 95 (318)
T 2woz_A 24 TAAVAYDPMENE-------CYLTALAEQIPRNHSSIVTQQN-QVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPP 95 (318)
T ss_dssp SEEEEEETTTTE-------EEEEEECTTSCSSEEEEECSSS-CEEEEESSCC-------CCCBEEEEEETTTTEEEECSC
T ss_pred cceEEECCCCCc-------eecccCCccCCccceEEEEECC-EEEEECCcccCccccCCCccccEEEEeCCCCcEEECCC
Confidence 357888887762 211 111111111222223444 68888873 12 277889887653321
Q ss_pred ecCCCCceEEEEEcCCCCEEEEEeCC-------CeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEE-ecCC-
Q psy14130 215 IDCHPDVINCLSFNRDGSRLVTTCKD-------KTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTG-FSRH- 285 (494)
Q Consensus 215 ~~~h~~~v~~l~~~~~~~~l~s~~~d-------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-~~~~- 285 (494)
+.........+.+ ++.+++.|+.+ ..+.+||+.+.+-...-.......-..++. .+ +.+++.| +...
T Consensus 96 ~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~-~~iyv~GG~~~~~ 171 (318)
T 2woz_A 96 LPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HN-GMIYCLGGKTDDK 171 (318)
T ss_dssp BSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ET-TEEEEECCEESSS
T ss_pred CCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-EC-CEEEEEcCCCCCC
Confidence 1111111122222 56777777754 358899998876332211111110112222 23 5666665 2110
Q ss_pred -CCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCC-----CcEEEEEeeCCC
Q psy14130 286 -SDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGD-----GNIRYYELTNER 344 (494)
Q Consensus 286 -~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~d-----g~i~~wd~~~~~ 344 (494)
.-..+.+||+.+..-. ..........-..++. -++ .|++.|+.+ ..+.+||+.+.+
T Consensus 172 ~~~~~~~~yd~~~~~W~-~~~~~p~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 172 KCTNRVFIYNPKKGDWK-DLAPMKTPRSMFGVAI-HKG-KIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp CBCCCEEEEETTTTEEE-EECCCSSCCBSCEEEE-ETT-EEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred CccceEEEEcCCCCEEE-ECCCCCCCcccceEEE-ECC-EEEEEcCcCCCCccceEEEEECCCCe
Confidence 1246899998764321 1111111111111222 244 555777644 346788887765
|
| >3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A | Back alignment and structure |
|---|
Probab=95.45 E-value=1.8 Score=40.99 Aligned_cols=144 Identities=11% Similarity=0.048 Sum_probs=90.3
Q ss_pred cCCcEEEEEEcCcEEEEEcCCCCCCCCcccceEecccc----cccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe---
Q psy14130 138 AGGGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGH----KRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE--- 210 (494)
Q Consensus 138 ~~~g~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h----~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~--- 210 (494)
..|..+.+...+.||.-++.... ..+.+.-. -..|..+..+|+| .+||..+ +..|.|-.+..+.
T Consensus 30 ~n~t~i~~a~~n~iR~~~i~~~~-------~Yk~L~~~~~i~f~~i~qlvlSpsG-~lLAl~g-~~~V~Vv~LP~~~~~~ 100 (452)
T 3pbp_A 30 QNGTRIVFIQDNIIRWYNVLTDS-------LYHSLNFSRHLVLDDTFHVISSTSG-DLLCLFN-DNEIFVMEVPWGYSNV 100 (452)
T ss_dssp TTTTEEEEEETTEEEEEETTTCS-------SCEEEECTTTCCCCTTCEEEECTTS-SEEEEEC-SSEEEEEECCTTCSCC
T ss_pred cCCCEEEEEECCEEEEEECCCCC-------cceEEecCcccccCceeEEEECCCC-CEEEEec-CCeEEEEEecCccccC
Confidence 56667777778889988887542 12222211 2256789999999 6888776 5688998886221
Q ss_pred ---------EEEEecC------CCCceEEEEEcC---CCCEEEEEeCCCeEEEEeCCCCc--eEEEeeecC--------C
Q psy14130 211 ---------ALTVIDC------HPDVINCLSFNR---DGSRLVTTCKDKTVRVLDPRTGL--VISQGVCHP--------G 262 (494)
Q Consensus 211 ---------~~~~~~~------h~~~v~~l~~~~---~~~~l~s~~~d~~v~iwd~~~~~--~~~~~~~~~--------~ 262 (494)
....+.- ...+|..+.|+| .+..|++-..|+.||+||+.... +. .+.... .
T Consensus 101 ~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~ 179 (452)
T 3pbp_A 101 EDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARV 179 (452)
T ss_dssp CCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSC
T ss_pred cccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCccc
Confidence 1223321 257799999999 46799999999999999998633 22 222110 0
Q ss_pred CCceEEEEECCCCeEEEEEecCCCCceEEEE
Q psy14130 263 TRSSKAVFIGDTGRIVTTGFSRHSDRQVGLW 293 (494)
Q Consensus 263 ~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iw 293 (494)
..+.+++|.+++=.|++..- +.+|.|+-.
T Consensus 180 ~ev~S~~Fg~~~lTLYvl~~--t~~GDIYAl 208 (452)
T 3pbp_A 180 NDITDLEFSKDGLTLYCLNT--TEGGDIFAF 208 (452)
T ss_dssp CCEEEEEECTTSSCEEEEEC--TTSCEEEEE
T ss_pred ceEEEEEEcCCCcEEEEEec--CCCCCEEEE
Confidence 23667777775333333220 355666543
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A | Back alignment and structure |
|---|
Probab=95.44 E-value=1.1 Score=40.58 Aligned_cols=145 Identities=11% Similarity=0.088 Sum_probs=72.3
Q ss_pred CEEEEEeCC-----CeEEEEECCCCeEEEE--ecCCCCceEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCCceEEEe
Q psy14130 190 NVVASAGFD-----YLIILWDVGKGEALTV--IDCHPDVINCLSFNRDGSRLVTTCKD-----KTVRVLDPRTGLVISQG 257 (494)
Q Consensus 190 ~~l~s~s~d-----~~v~iwd~~~~~~~~~--~~~h~~~v~~l~~~~~~~~l~s~~~d-----~~v~iwd~~~~~~~~~~ 257 (494)
.+++.|+.+ ..+.++|+.+.+-... +......-..+.+ ++.+++.|+.+ ..+.+||+.+.+-...-
T Consensus 123 ~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 200 (308)
T 1zgk_A 123 HIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMIT 200 (308)
T ss_dssp EEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECC
T ss_pred EEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCC
Confidence 577776643 3688899987753321 1111111122223 56777777654 46899999877632221
Q ss_pred eecCCCCceEEEEECCCCeEEEEEecCCCC-----ceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCC
Q psy14130 258 VCHPGTRSSKAVFIGDTGRIVTTGFSRHSD-----RQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGD 332 (494)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~d 332 (494)
..........++.. + +.+++.| +.+ ..+.+||+.+..-. .+........-..++. -++ .|++.|+.+
T Consensus 201 ~~p~~r~~~~~~~~-~-~~iyv~G---G~~~~~~~~~v~~yd~~~~~W~-~~~~~p~~r~~~~~~~-~~~-~i~v~GG~~ 272 (308)
T 1zgk_A 201 AMNTIRSGAGVCVL-H-NCIYAAG---GYDGQDQLNSVERYDVETETWT-FVAPMKHRRSALGITV-HQG-RIYVLGGYD 272 (308)
T ss_dssp CCSSCCBSCEEEEE-T-TEEEEEC---CBCSSSBCCCEEEEETTTTEEE-ECCCCSSCCBSCEEEE-ETT-EEEEECCBC
T ss_pred CCCCccccceEEEE-C-CEEEEEe---CCCCCCccceEEEEeCCCCcEE-ECCCCCCCccceEEEE-ECC-EEEEEcCcC
Confidence 11111111233333 3 5677766 332 56899998764221 1111111111111222 134 455777654
Q ss_pred -----CcEEEEEeeCCC
Q psy14130 333 -----GNIRYYELTNER 344 (494)
Q Consensus 333 -----g~i~~wd~~~~~ 344 (494)
..+.+||+.+.+
T Consensus 273 ~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 273 GHTFLDSVECYDPDTDT 289 (308)
T ss_dssp SSCBCCEEEEEETTTTE
T ss_pred CCcccceEEEEcCCCCE
Confidence 347788877654
|
| >1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A | Back alignment and structure |
|---|
Probab=95.31 E-value=2.3 Score=41.22 Aligned_cols=164 Identities=10% Similarity=0.035 Sum_probs=88.0
Q ss_pred cEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeE--EEEecC------CCCceEEEEEcCC---CCEEEEEe-C------
Q psy14130 178 RVGYIEWHPTAENVVASAGFDYLIILWDVGKGEA--LTVIDC------HPDVINCLSFNRD---GSRLVTTC-K------ 239 (494)
Q Consensus 178 ~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~--~~~~~~------h~~~v~~l~~~~~---~~~l~s~~-~------ 239 (494)
...+|+|.|+| +++++-...+.|++++..+++. +..+.. .......|+|+|+ +..|..+. .
T Consensus 28 ~P~~~a~~pdG-~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 28 KPHALLWGPDN-QIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CceEEEEcCCC-cEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 45799999998 5777654445788888755543 223321 2456789999995 44444433 2
Q ss_pred ------CCeEEEEeCCCC--c-----eEE-EeeecCCCCceEEEEECCCCeEEEEEecCC--------------------
Q psy14130 240 ------DKTVRVLDPRTG--L-----VIS-QGVCHPGTRSSKAVFIGDTGRIVTTGFSRH-------------------- 285 (494)
Q Consensus 240 ------d~~v~iwd~~~~--~-----~~~-~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~-------------------- 285 (494)
...|.-|+...+ + .+. .+..........++|.+++..++++|-...
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd~~~~~~~~~~~~~~~~~~p~~~~ 186 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGDQGRNQLAYLFLPNQAQHTPTQQE 186 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECCTTTTSGGGTTSCCCTTCCCCHHH
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECCCCCCCcccccccccccccccccc
Confidence 234555554332 1 121 122211122678999999665566551100
Q ss_pred --------CCceEEEEeCCCCCCc----------eeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCC
Q psy14130 286 --------SDRQVGLWDENDLNTP----------LALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNER 344 (494)
Q Consensus 286 --------~d~~i~iwd~~~~~~~----------~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~ 344 (494)
..|.|.-.+... ..+ ..+... .......++|+|++.+.++--+.++.-.|.-+..+.
T Consensus 187 ~~aq~~~~~~G~IlRi~~dG-~ip~~Npf~~~~~~ei~a~-G~RNp~gla~dp~G~L~~~d~g~~~~dein~i~~G~ 261 (454)
T 1cru_A 187 LNGKDYHTYMGKVLRLNLDG-SIPKDNPSFNGVVSHIYTL-GHRNPQGLAFTPNGKLLQSEQGPNSDDEINLIVKGG 261 (454)
T ss_dssp HHTTCCTTCSSEEEEECTTS-CCCTTCCEETTEECSEEEB-CCSEEEEEEECTTSCEEEEEECSSSCEEEEECCTTC
T ss_pred ccccCCCCCCeeEEEEeCCC-CCCCCCCCCCCCcceEEEE-CCCCcceEEECCCCCEEEEecCCCCCeEEEEecCCC
Confidence 023444444432 210 112222 335577889999877664444455555555555543
|
| >1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1 | Back alignment and structure |
|---|
Probab=94.93 E-value=2.7 Score=40.00 Aligned_cols=200 Identities=10% Similarity=0.077 Sum_probs=119.2
Q ss_pred cCCCeeee-CCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCCCCcccceEecccc----cccEEEEEEcCCCCCEEE
Q psy14130 119 HDSHFCAA-NPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGH----KRRVGYIEWHPTAENVVA 193 (494)
Q Consensus 119 ~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h----~~~V~~~~~~p~~~~~l~ 193 (494)
.++.+..| +++.+++++. ..|.-|++.... .|.+.+.-| ...|..-..+++...+++
T Consensus 106 e~VvfWkWis~~~l~lVT~------------taVyHWsi~~~s------~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l 167 (494)
T 1bpo_A 106 DDVTFWKWISLNTVALVTD------------NAVYHWSMEGES------QPVKMFDRHSSLAGCQIINYRTDAKQKWLLL 167 (494)
T ss_dssp SCCCEEEEEETTEEEEECS------------SEEEEEESSSSC------CCEEEEECCGGGTTCEEEEEEECTTSSEEEE
T ss_pred CCceEEEecCCCeEEEEcC------------CeeEEecccCCC------CchhheecchhcccceEEEEEECCCCCeEEE
Confidence 44555544 5555555543 379999997532 344444333 356777778888754444
Q ss_pred EEe------CCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCC---CEEEEEeCC---CeEEEEeCCCC---c-----e
Q psy14130 194 SAG------FDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDG---SRLVTTCKD---KTVRVLDPRTG---L-----V 253 (494)
Q Consensus 194 s~s------~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~---~~l~s~~~d---~~v~iwd~~~~---~-----~ 253 (494)
+|- -.|.+.+|..+.+ .-+.+++|...-..+....+. .+++.+.+. ++++|.++... . .
T Consensus 168 ~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk 246 (494)
T 1bpo_A 168 TGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKK 246 (494)
T ss_dssp EEEEEETTEEEEEEEEEESTTC-CEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCE
T ss_pred EeecccCCcccceEEEeecccc-ccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccce
Confidence 442 2478899998654 456678886655544443221 244545443 78999998543 1 1
Q ss_pred EEEee----ecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEE
Q psy14130 254 ISQGV----CHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAG 329 (494)
Q Consensus 254 ~~~~~----~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g 329 (494)
...+. ...+- ...+..++..+-++... .-|.|++||++++.....- .+ ....|...+.+....-+ ++-
T Consensus 247 ~vdv~fppe~~~DF-Pvamqvs~kygviyviT----K~G~i~lyDleTgt~i~~n-rI-s~~~iF~t~~~~~~~Gi-~~V 318 (494)
T 1bpo_A 247 AVDVFFPPEAQNDF-PVAMQISEKHDVVFLIT----KYGYIHLYDLETGTCIYMN-RI-SGETIFVTAPHEATAGI-IGV 318 (494)
T ss_dssp EEECCCCTTSTTCC-EEEEEEETTTTEEEEEE----TTSEEEEEETTTCCEEEEE-EC-CSSCEEEEEEETTTTEE-EEE
T ss_pred eeeeeCCcccccCc-eeEEEecccCCEEEEEe----cCceEEEEecccceeeeee-cc-cCCceEEecccCCCCcE-EEE
Confidence 11111 11223 56777888777777776 8999999999987654332 22 33445445555555555 444
Q ss_pred eCCCcEEEEEeeCCCc
Q psy14130 330 KGDGNIRYYELTNERP 345 (494)
Q Consensus 330 ~~dg~i~~wd~~~~~~ 345 (494)
...|.|.--.+.....
T Consensus 319 nr~GqVl~v~v~e~~i 334 (494)
T 1bpo_A 319 NRKGQVLSVCVEEENI 334 (494)
T ss_dssp ETTCEEEEEEECTTTH
T ss_pred ccCceEEEEEEccccc
Confidence 5788777777766654
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.88 E-value=0.73 Score=42.06 Aligned_cols=105 Identities=14% Similarity=0.056 Sum_probs=53.1
Q ss_pred CEEEEEeCC--------CeEEEEECCCCeEEEE--ecCCCCceEEEEEcCCCCEEEEEeC-C-----CeEEEEeCCCCce
Q psy14130 190 NVVASAGFD--------YLIILWDVGKGEALTV--IDCHPDVINCLSFNRDGSRLVTTCK-D-----KTVRVLDPRTGLV 253 (494)
Q Consensus 190 ~~l~s~s~d--------~~v~iwd~~~~~~~~~--~~~h~~~v~~l~~~~~~~~l~s~~~-d-----~~v~iwd~~~~~~ 253 (494)
.+++.|+.+ ..+.++|+.+.+-... +......-..+. -++++++.|+. + ..+.+||+.+.+-
T Consensus 100 ~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W 177 (315)
T 4asc_A 100 SIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEW 177 (315)
T ss_dssp EEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTSCBCCCEEEEETTTTEE
T ss_pred EEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCCCCcccceEEEEeCCCCeE
Confidence 577777642 4688999987753221 111111112222 35667777765 2 4689999988763
Q ss_pred EEEeeecCCCCceEEEEECCCCeEEEEE-ecCC-CCceEEEEeCCCC
Q psy14130 254 ISQGVCHPGTRSSKAVFIGDTGRIVTTG-FSRH-SDRQVGLWDENDL 298 (494)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g-~~~~-~d~~i~iwd~~~~ 298 (494)
...-..........++.. + +++++.| +... .-..+.+||+.+.
T Consensus 178 ~~~~~~p~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 178 KELAPMQTARSLFGATVH-D-GRIIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp EECCCCSSCCBSCEEEEE-T-TEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred EECCCCCCchhceEEEEE-C-CEEEEEeccCCCCccceEEEEECCCC
Confidence 222111111111223333 3 4566655 2110 0136888998764
|
| >1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A* | Back alignment and structure |
|---|
Probab=94.28 E-value=0.75 Score=39.31 Aligned_cols=148 Identities=11% Similarity=0.070 Sum_probs=77.5
Q ss_pred cEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeE------EEEecC-CCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy14130 178 RVGYIEWHPTAENVVASAGFDYLIILWDVGKGEA------LTVIDC-HPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRT 250 (494)
Q Consensus 178 ~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~------~~~~~~-h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~ 250 (494)
.+..++|+|+| .+.+. .+|.+.-.+..+... -..+-. --..-.++.|.|+|.+.++ .||.|.-++.-+
T Consensus 42 ~~~~laf~P~G-~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 42 NFKFLFLSPGG-ELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TCSEEEECTTS-CEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred cceeEEECCCc-cEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 56699999988 45555 577766666544211 111210 1111468899999988887 569998887633
Q ss_pred Cce-----EEEeeecCC-CCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCC-----ceeEeeecCCCceEEeEEe
Q psy14130 251 GLV-----ISQGVCHPG-TRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNT-----PLALETVDSSSGVLFPYYD 319 (494)
Q Consensus 251 ~~~-----~~~~~~~~~-~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~-----~~~~~~~~~~~~v~~~~~~ 319 (494)
... .....+..+ ..+..+.+.|+ +.|.++. |+.+.-....+... ...............+.|+
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~-G~Lyav~-----dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~ 190 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPN-GYLYAVH-----GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFS 190 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTT-SCEEEEE-----TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEEC
T ss_pred CCCCceeccccEeccCCCCceEEEEECCC-ceEEEEe-----CCcEEecCCCCCCCcccccccceeccCCcceEEEEEEC
Confidence 210 011111111 22556666666 7788776 66644332221110 0001111222334556788
Q ss_pred CCCCEEEEEEeCCCcEEEEEee
Q psy14130 320 HDTRILFLAGKGDGNIRYYELT 341 (494)
Q Consensus 320 ~~~~~l~~~g~~dg~i~~wd~~ 341 (494)
+++....+. +| ++|...
T Consensus 191 ~~G~l~~v~---~g--~~Y~~~ 207 (236)
T 1tl2_A 191 SVGTLFGVQ---GG--KFYEDY 207 (236)
T ss_dssp TTSCEEEEE---TT--EEEEES
T ss_pred CCCcEEEEe---CC--eEEecC
Confidence 888877443 56 445443
|
| >2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=94.25 E-value=3.5 Score=38.35 Aligned_cols=147 Identities=8% Similarity=-0.016 Sum_probs=77.3
Q ss_pred cEEEEEEcCCCCC-EEEEEeCCCeEEEEECCCCeEEEEe-------cCCCCceEEEEEcCC---CCEEEEE-eC------
Q psy14130 178 RVGYIEWHPTAEN-VVASAGFDYLIILWDVGKGEALTVI-------DCHPDVINCLSFNRD---GSRLVTT-CK------ 239 (494)
Q Consensus 178 ~V~~~~~~p~~~~-~l~s~s~d~~v~iwd~~~~~~~~~~-------~~h~~~v~~l~~~~~---~~~l~s~-~~------ 239 (494)
....|+|.|+| + +++ +...|.|++++.. +.....+ .........|+|+|+ +..|..+ +.
T Consensus 19 ~P~~i~~~pdG-~~l~V-~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~ 95 (353)
T 2g8s_A 19 HPWALAFLPDN-HGMLI-TLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGK 95 (353)
T ss_dssp SEEEEEECSTT-CCEEE-EETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSC
T ss_pred CcEEEEEcCCC-CEEEE-EeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCC
Confidence 45799999998 5 554 4567999999853 4322111 112356789999995 4444433 32
Q ss_pred -CCeEEEEeCCCC--c--eEEEe----ee--cCCCCceEEEEECCCCeEEEEEec---------CCCCceEEEEeCCCCC
Q psy14130 240 -DKTVRVLDPRTG--L--VISQG----VC--HPGTRSSKAVFIGDTGRIVTTGFS---------RHSDRQVGLWDENDLN 299 (494)
Q Consensus 240 -d~~v~iwd~~~~--~--~~~~~----~~--~~~~~~~~~~~~~~~~~l~~~g~~---------~~~d~~i~iwd~~~~~ 299 (494)
...|..|++..+ . ....+ .. ........++|.|++..+++.|-. ....+.|.-+|....-
T Consensus 96 ~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~ 175 (353)
T 2g8s_A 96 AGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEI 175 (353)
T ss_dssp EEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCC
T ss_pred ceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCC
Confidence 235666666533 1 11111 10 011114579999986444444410 0012467777765320
Q ss_pred ---C--------ceeEeeecCCCceEEeEEeCCCCEEEEE
Q psy14130 300 ---T--------PLALETVDSSSGVLFPYYDHDTRILFLA 328 (494)
Q Consensus 300 ---~--------~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 328 (494)
. ...+... .......++|+|+...|+++
T Consensus 176 p~~npf~~~~~~~~~i~a~-G~rnp~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 176 PDDNPFIKESGVRAEIWSY-GIRNPQGMAMNPWSNALWLN 214 (353)
T ss_dssp CTTCTTTTSTTSCTTEEEE-CCSEEEEEEEETTTTEEEEE
T ss_pred CCCCCCcCCCCCCccEEEE-cCcCccceEEECCCCCEEEE
Confidence 0 1111112 33457789999954455455
|
| >1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A* | Back alignment and structure |
|---|
Probab=94.25 E-value=2.3 Score=36.33 Aligned_cols=181 Identities=10% Similarity=-0.049 Sum_probs=97.1
Q ss_pred CEEEEEeCCCeEEEEECCCCe------EEEEecC-CCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce-----EEEe
Q psy14130 190 NVVASAGFDYLIILWDVGKGE------ALTVIDC-HPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLV-----ISQG 257 (494)
Q Consensus 190 ~~l~s~s~d~~v~iwd~~~~~------~~~~~~~-h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~-----~~~~ 257 (494)
.+|+....| +++.=-...+. ....+-. --..+..++|+|+|.+.+. .+|.+.-.+..+... ..+.
T Consensus 5 ~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~ 81 (236)
T 1tl2_A 5 SMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKK 81 (236)
T ss_dssp CCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEE
T ss_pred eEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccE
Confidence 577777777 66654443332 1222221 1247789999999986666 778888777755221 0111
Q ss_pred eecCCCC-ceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCce-----eEeeecCCCceEEeEEeCCCCEEEEEEeC
Q psy14130 258 VCHPGTR-SSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPL-----ALETVDSSSGVLFPYYDHDTRILFLAGKG 331 (494)
Q Consensus 258 ~~~~~~~-~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~~~g~~ 331 (494)
.+..+.. ...+.|.++ +.|.++. ||.|.-++..+..... .......-..+..+.++|+|... +..
T Consensus 82 IG~~Gw~~F~a~~fD~~-G~LYav~-----dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Ly-av~-- 152 (236)
T 1tl2_A 82 IGNGGWNQFQFLFFDPN-GYLYAVS-----KDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLY-AVH-- 152 (236)
T ss_dssp EECSCGGGCSEEEECTT-SCEEEEE-----TTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEE-EEE--
T ss_pred ecccccccceEEEECCC-CCEEEeC-----CCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEE-EEe--
Confidence 2211111 245556555 7777776 6888888753321110 01111122567889999999877 544
Q ss_pred CCcEEEEEeeCCCc-----eEEecccccCCCCeeEEEEecCCceeeeccceeEEEEeeC
Q psy14130 332 DGNIRYYELTNERP-----YIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 332 dg~i~~wd~~~~~~-----~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~~ 385 (494)
|+.++-....++.. ....+. ...-...+-+.|.|++.+.+.. ..++|....
T Consensus 153 dg~lyr~~~P~~~~~~wl~~~~~~g-~~g~~~yr~l~f~~~G~l~~v~--~g~~Y~~~~ 208 (236)
T 1tl2_A 153 GQQFYKALPPVSNQDNWLARATKIG-QGGWDTFKFLFFSSVGTLFGVQ--GGKFYEDYP 208 (236)
T ss_dssp TTEEEEECCCSSTTCCHHHHCEEEE-SSSGGGEEEEEECTTSCEEEEE--TTEEEEESC
T ss_pred CCcEEecCCCCCCCcccccccceec-cCCcceEEEEEECCCCcEEEEe--CCeEEecCC
Confidence 77653322221110 001111 0111234557799998777666 447777654
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} | Back alignment and structure |
|---|
Probab=94.22 E-value=3.4 Score=38.23 Aligned_cols=139 Identities=6% Similarity=-0.030 Sum_probs=61.7
Q ss_pred CeEEEEECCCCeEE--EEecCCCCceEEEEEcCCCCEEEEEeC------CCeEEEEeC--CCCceEE--EeeecCCCCce
Q psy14130 199 YLIILWDVGKGEAL--TVIDCHPDVINCLSFNRDGSRLVTTCK------DKTVRVLDP--RTGLVIS--QGVCHPGTRSS 266 (494)
Q Consensus 199 ~~v~iwd~~~~~~~--~~~~~h~~~v~~l~~~~~~~~l~s~~~------d~~v~iwd~--~~~~~~~--~~~~~~~~~~~ 266 (494)
..+.++|+.+.+-. ..+......-.+++.. ++++++.|+. ...+.+||+ .+.+-.. .+...... ..
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~-~~ 245 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGV-AG 245 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCC-BS
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCccc-cc
Confidence 47899999887533 2222111110223332 5666666653 345777887 4443221 11111111 12
Q ss_pred EEEEECCCCeEEEEEecCCCC----------------------ceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCE
Q psy14130 267 KAVFIGDTGRIVTTGFSRHSD----------------------RQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRI 324 (494)
Q Consensus 267 ~~~~~~~~~~l~~~g~~~~~d----------------------~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 324 (494)
..+...+ +.+++.| +.+ ..+.+||+.+..-.. +........ ...+...+++
T Consensus 246 ~~~~~~~-~~iyv~G---G~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~r~-~~~~~~~~~~- 318 (357)
T 2uvk_A 246 GFAGISN-DSLIFAG---GAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDK-SGELSQGRA-YGVSLPWNNS- 318 (357)
T ss_dssp CEEEEET-TEEEEEC---CEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEE-EEECSSCCB-SSEEEEETTE-
T ss_pred ceEEEEC-CEEEEEc---CccccCCcccccccceeccccccceeeEEEEecCCCceee-CCCCCCCcc-cceeEEeCCE-
Confidence 1122223 5666666 221 257889988644322 222222111 1112223444
Q ss_pred EEEEEeCCC------cEEEEEeeCCCce
Q psy14130 325 LFLAGKGDG------NIRYYELTNERPY 346 (494)
Q Consensus 325 l~~~g~~dg------~i~~wd~~~~~~~ 346 (494)
|++.|+.++ .|.++++++++..
T Consensus 319 i~v~GG~~~~~~~~~~v~~l~~~~~~~~ 346 (357)
T 2uvk_A 319 LLIIGGETAGGKAVTDSVLITVKDNKVT 346 (357)
T ss_dssp EEEEEEECGGGCEEEEEEEEEC-CCSCE
T ss_pred EEEEeeeCCCCCEeeeEEEEEEcCcEeE
Confidence 447777543 3666688887753
|
| >4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B | Back alignment and structure |
|---|
Probab=94.16 E-value=3.1 Score=44.47 Aligned_cols=76 Identities=16% Similarity=0.098 Sum_probs=52.3
Q ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCC----CCceEEEEECCCCeEEEEEecCCCCceEEEEeCC
Q psy14130 221 VINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPG----TRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEN 296 (494)
Q Consensus 221 ~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~ 296 (494)
.+.+++..++..++++-+.|+++|+|++.+++++.+...... .........+..+.++.+-|+...++..++|.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL~~~~~~~~~~~~~~~~~~~~~~i~v~~s~~~~g~F~~~~~~ 316 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIELSQTILPLQSFPYLTSDHTTNSFIALYYPDNSHGSFSIYKLN 316 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEECCCCCCCSCCCCCEEECSSSTTEEEEEECCSSSCEEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeecccccCCccccccccccCCCcccEEEEEEcCCCCcEEEEEEEe
Confidence 467788888889999999999999999999998887643211 1112223344445555555555667888888653
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* | Back alignment and structure |
|---|
Probab=94.10 E-value=3.3 Score=42.61 Aligned_cols=152 Identities=11% Similarity=0.073 Sum_probs=80.2
Q ss_pred CCCCEEEEEeCC------CeEEEEECCCCeEEEE--ecCCCCceEEEEEcCCCCEEEEEeCCC--eEEEEeCCCCceEEE
Q psy14130 187 TAENVVASAGFD------YLIILWDVGKGEALTV--IDCHPDVINCLSFNRDGSRLVTTCKDK--TVRVLDPRTGLVISQ 256 (494)
Q Consensus 187 ~~~~~l~s~s~d------~~v~iwd~~~~~~~~~--~~~h~~~v~~l~~~~~~~~l~s~~~d~--~v~iwd~~~~~~~~~ 256 (494)
++ .+++.|+.+ ..+.+||+.+.+-... +... ..-.+++...++.+++.|+.++ .+.+||+.+.+-...
T Consensus 451 ~~-~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~-R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~ 528 (695)
T 2zwa_A 451 NN-QLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHT-RFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDV 528 (695)
T ss_dssp TT-EEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBC-CBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEEC
T ss_pred CC-EEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCC-cccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEc
Confidence 44 577777754 3578899887653221 1111 1112333334788888887654 699999998763222
Q ss_pred ee---ec-CCCCceEEEEECCCCeEEEEEecCCC-------CceEEEEeCCCCCC--ce---eEeee--cCCCceEEeEE
Q psy14130 257 GV---CH-PGTRSSKAVFIGDTGRIVTTGFSRHS-------DRQVGLWDENDLNT--PL---ALETV--DSSSGVLFPYY 318 (494)
Q Consensus 257 ~~---~~-~~~~~~~~~~~~~~~~l~~~g~~~~~-------d~~i~iwd~~~~~~--~~---~~~~~--~~~~~v~~~~~ 318 (494)
-. .. .......+++....+.+++.| +. -..+.+||+.+... .. .+... ........+.+
T Consensus 529 ~~~g~~p~~r~~~~a~v~~~~~~~iyv~G---G~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~ 605 (695)
T 2zwa_A 529 TPKDEFFQNSLVSAGLEFDPVSKQGIILG---GGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYI 605 (695)
T ss_dssp CCSSGGGGSCCBSCEEEEETTTTEEEEEC---CBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEE
T ss_pred cCCCCCCCcccceeEEEEeCCCCEEEEEC---CcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEe
Confidence 11 00 111123355555546677766 22 25688999887551 11 11110 11111122222
Q ss_pred eCCCCEEEEEEeC--------CCcEEEEEeeCCCc
Q psy14130 319 DHDTRILFLAGKG--------DGNIRYYELTNERP 345 (494)
Q Consensus 319 ~~~~~~l~~~g~~--------dg~i~~wd~~~~~~ 345 (494)
.++ .||+.|+. ...|.+||+.+.+-
T Consensus 606 -~~~-~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W 638 (695)
T 2zwa_A 606 -TPR-KLLIVGGTSPSGLFDRTNSIISLDPLSETL 638 (695)
T ss_dssp -ETT-EEEEECCBCSSCCCCTTTSEEEEETTTTEE
T ss_pred -CCC-EEEEECCccCCCCCCCCCeEEEEECCCCeE
Confidence 224 45577764 34589999988753
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} | Back alignment and structure |
|---|
Probab=93.88 E-value=4 Score=37.75 Aligned_cols=49 Identities=10% Similarity=0.040 Sum_probs=27.1
Q ss_pred CEEEEEeC-C---------CeEEEEECCCCeEEEE--ec-CCCCceEEEEEcCCCCEEEEEeCC
Q psy14130 190 NVVASAGF-D---------YLIILWDVGKGEALTV--ID-CHPDVINCLSFNRDGSRLVTTCKD 240 (494)
Q Consensus 190 ~~l~s~s~-d---------~~v~iwd~~~~~~~~~--~~-~h~~~v~~l~~~~~~~~l~s~~~d 240 (494)
.+++.|+. + ..+.++|+.+.+-... +. ........+. .++++++.|+.+
T Consensus 67 ~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~ 128 (357)
T 2uvk_A 67 NLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFV--HNGKAYVTGGVN 128 (357)
T ss_dssp EEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEE--ETTEEEEEECCC
T ss_pred EEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEE--ECCEEEEEeCcC
Confidence 57777765 2 4688999987753322 11 1111122222 467788888754
|
| >3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=93.62 E-value=4.5 Score=37.43 Aligned_cols=166 Identities=11% Similarity=-0.027 Sum_probs=88.7
Q ss_pred ccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeE--EEEec----CCCCceEEEEEcCC----CCEEEEEe--CCCeEE
Q psy14130 177 RRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEA--LTVID----CHPDVINCLSFNRD----GSRLVTTC--KDKTVR 244 (494)
Q Consensus 177 ~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~--~~~~~----~h~~~v~~l~~~~~----~~~l~s~~--~d~~v~ 244 (494)
.....|+|.|+| .++++--..|.|++++...++. +..+. ........|+++|+ +.+.++-+ .+..|.
T Consensus 32 ~~P~~ia~~pdG-~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 32 NSPWGLAPLPGG-DLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp SSEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CCceEEEEcCCC-cEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 346799999998 5777665589999998765543 22221 23567899999995 44433322 345666
Q ss_pred EEeCCCC----------ceE-EEeeecCCCCceEEEEECCCCeEEEEEecC---------CCCceEEEEeCCCC---CCc
Q psy14130 245 VLDPRTG----------LVI-SQGVCHPGTRSSKAVFIGDTGRIVTTGFSR---------HSDRQVGLWDENDL---NTP 301 (494)
Q Consensus 245 iwd~~~~----------~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~---------~~d~~i~iwd~~~~---~~~ 301 (494)
-|.+..+ +.+ ..+..........++|.+++..++++|-.. ...+.|.-.+.... ..+
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nP 190 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNP 190 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCS
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCC
Confidence 6665541 112 222211111246789999865555555100 01345554554421 000
Q ss_pred ---eeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCC
Q psy14130 302 ---LALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNER 344 (494)
Q Consensus 302 ---~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~ 344 (494)
..+... .......++|+|++.+.++--+.|+.=.|--+..+.
T Consensus 191 f~~~~i~a~-G~RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G~ 235 (347)
T 3das_A 191 FPGSPVYSY-GHRNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGD 235 (347)
T ss_dssp STTCCEEEB-CCSBCCEEEECTTCCEEEEECCSSSCEEEEEECTTC
T ss_pred CCCCeEEee-CCCCcceEEECCCCCEEEEecCCCCCceeeEEcCCC
Confidence 112222 334566789999877653323344444444444443
|
| >3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ... | Back alignment and structure |
|---|
Probab=93.36 E-value=11 Score=41.20 Aligned_cols=223 Identities=8% Similarity=0.054 Sum_probs=116.8
Q ss_pred CcEEEEEEcCcEEEEEcCCCCCCCCcccceEeccc-ccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeE--EEEec
Q psy14130 140 GGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHG-HKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEA--LTVID 216 (494)
Q Consensus 140 ~g~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~-h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~--~~~~~ 216 (494)
++.++-...+.|++.+.... ..+..+.. ....|...+.+.. +++.++ ++.+.++.+..++. .....
T Consensus 483 ~~~ivQVt~~~Irli~~~~~-------~~~~~w~~p~~~~I~~As~n~~---~vvva~-g~~l~~fel~~~~L~~~~~~~ 551 (1158)
T 3ei3_A 483 HQQLIQITSASVRLVSQEPK-------ALVSEWKEPQAKNISVASCNSS---QVVVAV-GRALYYLQIHPQELRQISHTE 551 (1158)
T ss_dssp TTEEEEEESSCEEEEESSSC-------CEEEEECCTTCCCCCEEEECSS---EEEEEE-TTEEEEEEEETTEEEEEEEEE
T ss_pred CCeEEEEecCEEEEEECCCC-------eEEEEEECCCCCEEEEEEeCCC---EEEEEE-CCEEEEEEeeCCceeeecccC
Confidence 44555555556888887654 22333332 2345777776642 444445 57888888776542 22222
Q ss_pred CCCCceEEEEEcCC------CCEEEEEeC-CCeEEEEeCCCCceEEEeeecCCCCceEEEEEC-CCCeEEEEEecCCCCc
Q psy14130 217 CHPDVINCLSFNRD------GSRLVTTCK-DKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIG-DTGRIVTTGFSRHSDR 288 (494)
Q Consensus 217 ~h~~~v~~l~~~~~------~~~l~s~~~-d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~g~~~~~d~ 288 (494)
-.+.|.|+++.|. +++++.|.. |++++|+++.+.+.+..........+.++.... .+..++..| ..||
T Consensus 552 -l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~ig---l~dG 627 (1158)
T 3ei3_A 552 -MEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCA---LGDG 627 (1158)
T ss_dssp -CSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEE---ETTS
T ss_pred -CCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEE---eCCC
Confidence 3568999999863 469999997 999999999877765443332212233333322 224556677 6898
Q ss_pred eEEEEeCCC--CCCceeEeeecCCCceEEeEEeCCCC-EEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEE-EE
Q psy14130 289 QVGLWDEND--LNTPLALETVDSSSGVLFPYYDHDTR-ILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGL-GF 364 (494)
Q Consensus 289 ~i~iwd~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~-~~ 364 (494)
.+.-+.+.. +.........-+..++.-..+...+. .++++| +.-..+|-- .++.....+. ..++..+ .|
T Consensus 628 ~l~~~~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s--~rp~liy~~-~~~l~~s~l~----~~~v~~~~~F 700 (1158)
T 3ei3_A 628 ALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACS--DRPTVIYSS-NHKLVFSNVN----LKEVNYMCPL 700 (1158)
T ss_dssp EEEEEEECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEES--SSCEEEEES-SSSEEEEEBS----SSCCCEEEEE
T ss_pred eEEEEEEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEEC--CCCEEEEEc-CCceEEeccC----hHHhceEecc
Confidence 876665442 21111111112334444444444443 343333 444444433 2332222221 1234333 35
Q ss_pred e----cCCceeeeccceeEEEEeeC
Q psy14130 365 M----PKRGCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 365 ~----p~~~~~~~~~~~~~~~~l~~ 385 (494)
+ |++ +++..++.+||..+..
T Consensus 701 ~se~~~~g-~v~~~~~~LrI~~i~~ 724 (1158)
T 3ei3_A 701 NSDGYPDS-LALANNSTLTIGTIDE 724 (1158)
T ss_dssp CCSSSTTE-EEEECSSCEEEEEECC
T ss_pred CcccCCCc-EEEEcCCceEEEEecc
Confidence 3 333 3344455688888754
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* | Back alignment and structure |
|---|
Probab=93.06 E-value=5.4 Score=41.01 Aligned_cols=151 Identities=11% Similarity=0.039 Sum_probs=79.1
Q ss_pred CEEEEEeCC----CeEEEEECCCCeEEEEe-c------CCCCceEEEEEcC-CCCEEEEEeCC------CeEEEEeCCCC
Q psy14130 190 NVVASAGFD----YLIILWDVGKGEALTVI-D------CHPDVINCLSFNR-DGSRLVTTCKD------KTVRVLDPRTG 251 (494)
Q Consensus 190 ~~l~s~s~d----~~v~iwd~~~~~~~~~~-~------~h~~~v~~l~~~~-~~~~l~s~~~d------~~v~iwd~~~~ 251 (494)
.+++.|+.+ ..+.++|+.+++-...- . .....-.+++..+ ++.+++.|+.+ ..+.+||+.+.
T Consensus 399 ~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~ 478 (695)
T 2zwa_A 399 DVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTR 478 (695)
T ss_dssp CEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTT
T ss_pred EEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCC
Confidence 677788753 36888998877533222 1 1111112333333 67777777753 35889999886
Q ss_pred ceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCc--eEEEEeCCCCCCceeEe--eec-CCCceEEeEEeCCCCEEE
Q psy14130 252 LVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDR--QVGLWDENDLNTPLALE--TVD-SSSGVLFPYYDHDTRILF 326 (494)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~--~i~iwd~~~~~~~~~~~--~~~-~~~~v~~~~~~~~~~~l~ 326 (494)
+-...-.......-..++...+ +.+++.| +.++ .+.+||+.+..-..... ... .......+.+..+...||
T Consensus 479 ~W~~~~~~p~~R~~h~~~~~~~-~~iyv~G---G~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iy 554 (695)
T 2zwa_A 479 EWSMIKSLSHTRFRHSACSLPD-GNVLILG---GVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGI 554 (695)
T ss_dssp EEEECCCCSBCCBSCEEEECTT-SCEEEEC---CBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEE
T ss_pred cEEECCCCCCCcccceEEEEcC-CEEEEEC---CCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEE
Confidence 5322211111111122333234 5666665 2222 79999987643211100 000 111223355566645666
Q ss_pred EEEeC--C-----CcEEEEEeeCCC
Q psy14130 327 LAGKG--D-----GNIRYYELTNER 344 (494)
Q Consensus 327 ~~g~~--d-----g~i~~wd~~~~~ 344 (494)
+.|+. + +.+.+||+.+.+
T Consensus 555 v~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 555 ILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp EECCBCTTSSCBCCEEEEEEECTTC
T ss_pred EECCcCCCCCeeeCcEEEEEccCCc
Confidence 88865 2 358899998876
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=92.70 E-value=5.6 Score=36.03 Aligned_cols=107 Identities=16% Similarity=0.148 Sum_probs=53.3
Q ss_pred CEEEEEeCC-------CeEEEEECCCCeEEEEecCCCCce-EEEEEcCCCCEEEEEeC------CCeEEEEeCCCCceEE
Q psy14130 190 NVVASAGFD-------YLIILWDVGKGEALTVIDCHPDVI-NCLSFNRDGSRLVTTCK------DKTVRVLDPRTGLVIS 255 (494)
Q Consensus 190 ~~l~s~s~d-------~~v~iwd~~~~~~~~~~~~h~~~v-~~l~~~~~~~~l~s~~~------d~~v~iwd~~~~~~~~ 255 (494)
.+++.|+.+ ..+.++|+.+.+-...-....... .+++. .++++++.|+. -..+.+||+.+.+-..
T Consensus 111 ~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~ 189 (318)
T 2woz_A 111 KIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKD 189 (318)
T ss_dssp EEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTEEEE
T ss_pred EEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEE
Confidence 577777754 357888988775332211000111 11222 35667777664 2459999999876332
Q ss_pred EeeecCCCCceEEEEECCCCeEEEEE-ecCC-CCceEEEEeCCCCC
Q psy14130 256 QGVCHPGTRSSKAVFIGDTGRIVTTG-FSRH-SDRQVGLWDENDLN 299 (494)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~l~~~g-~~~~-~d~~i~iwd~~~~~ 299 (494)
.-..........++.. + +.+++.| +... ....+.+||+.+..
T Consensus 190 ~~~~p~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 190 LAPMKTPRSMFGVAIH-K-GKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp ECCCSSCCBSCEEEEE-T-TEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred CCCCCCCcccceEEEE-C-CEEEEEcCcCCCCccceEEEEECCCCe
Confidence 2111111111233333 3 4565555 2111 12467789987643
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=92.60 E-value=6.5 Score=43.40 Aligned_cols=219 Identities=11% Similarity=0.098 Sum_probs=122.0
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcC
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNR 229 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~ 229 (494)
+|.|-|+..+... .+ ..-..-+.-.||.. +++|--. ..++.|+|+++.+.+..+.- ...|.-=.|-.
T Consensus 49 ~vvIidl~~~~~~------~r----rpi~AdsAIMnP~~-~iiALra-g~~lQiFnl~~k~klks~~~-~e~VvfWkWis 115 (1630)
T 1xi4_A 49 QVVIIDMNDPSNP------IR----RPISADSAIMNPAS-KVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWIS 115 (1630)
T ss_pred eEEEEECCCCCCc------cc----ccccchhhccCCCc-ceEEEec-CCeEEEeehHHhhhhccccc-CCCceEEEecC
Confidence 6888888876321 11 11112345578886 6776665 68999999998887777663 44555556654
Q ss_pred CCCEEEEEeCCCeEEEEeCCCC-ceEEEeeecC---CCCceEEEEECCCCeEEEEEec---CCCCceEEEEeCCCCCCce
Q psy14130 230 DGSRLVTTCKDKTVRVLDPRTG-LVISQGVCHP---GTRSSKAVFIGDTGRIVTTGFS---RHSDRQVGLWDENDLNTPL 302 (494)
Q Consensus 230 ~~~~l~s~~~d~~v~iwd~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~g~~---~~~d~~i~iwd~~~~~~~~ 302 (494)
+. .|+-.+ +..|..|++... .++..+..|. +.++......++..+++.+|-+ +.-.|.+.+|..+......
T Consensus 116 ~~-~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~ 193 (1630)
T 1xi4_A 116 LN-TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQP 193 (1630)
T ss_pred CC-eeEEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchh
Confidence 44 333333 457999999643 3444444442 3346666777887888888853 2245888999877533211
Q ss_pred eEeeecCCCceEEeEE--eCCCCEEEEEEeC---CCcEEEEEeeCC---C-ceEEeccc--cc---CCCCeeEEEEecCC
Q psy14130 303 ALETVDSSSGVLFPYY--DHDTRILFLAGKG---DGNIRYYELTNE---R-PYIHFLNQ--SL---SGAPQRGLGFMPKR 368 (494)
Q Consensus 303 ~~~~~~~~~~v~~~~~--~~~~~~l~~~g~~---dg~i~~wd~~~~---~-~~~~~~~~--~~---~~~~v~~~~~~p~~ 368 (494)
+. +|...-..+.. .+....|++.+.. .+.++|-++... . ++.+.... +. ...-..++..+++.
T Consensus 194 -ie--gha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~ 270 (1630)
T 1xi4_A 194 -IE--GHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKH 270 (1630)
T ss_pred -hh--HhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEecccc
Confidence 11 11111111111 1111223232221 268999888543 1 11100000 11 12334566667765
Q ss_pred c--eeeeccceeEEEEeeCC
Q psy14130 369 G--CDVTQCEIFRFFKLHTT 386 (494)
Q Consensus 369 ~--~~~~~~~~~~~~~l~~~ 386 (494)
. ++++..|.+.++++.++
T Consensus 271 g~iy~itk~G~~~~~d~~t~ 290 (1630)
T 1xi4_A 271 DVVFLITKYGYIHLYDLETG 290 (1630)
T ss_pred CEEEEEecCceEEEEecccc
Confidence 4 45677999999999884
|
| >3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=89.39 E-value=12 Score=33.78 Aligned_cols=176 Identities=8% Similarity=-0.036 Sum_probs=96.8
Q ss_pred EEEcCCCCCEEEEEeCC-------------CeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEe----CCCeEE
Q psy14130 182 IEWHPTAENVVASAGFD-------------YLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTC----KDKTVR 244 (494)
Q Consensus 182 ~~~~p~~~~~l~s~s~d-------------~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~----~d~~v~ 244 (494)
--++++++.+..+...+ +.|+..++..++... +... . +..|+++++.|+-.. .+..|.
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~-l~~~--~--~~~~s~~g~~Iy~~~~~~~~~~~Iy 132 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTV-LDPD--P--CIYASLIGNYIYYLHYDTQTATSLY 132 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEE-EECS--C--EEEEEEETTEEEEEEESSSSCEEEE
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceE-eecC--C--ccEEEEeCCEEEEEeecCCCCceEE
Confidence 34577875445554443 468888887665332 3221 1 236777888888766 344566
Q ss_pred EEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCE
Q psy14130 245 VLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRI 324 (494)
Q Consensus 245 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 324 (494)
..++.... ...+..+.. ..+.++++.|+.+. ....+|.+-++...... .+ ... ... ..++|++++
T Consensus 133 ~~~~dGs~-~~~lt~~~~-----~~~~~~g~~iy~t~---~g~~~Iy~~~l~g~~~~-~l--~~~--~~~-~~~~P~g~~ 197 (302)
T 3s25_A 133 RIRIDGEE-KKKIKNHYL-----FTCNTSDRYFYYNN---PKNGQLYRYDTASQSEA-LF--YDC--NCY-KPVVLDDTN 197 (302)
T ss_dssp EEETTSCC-CEEEESSCC-----CCSEEETTEEEEEC---TTTCCEEEEETTTTEEE-EE--ECS--CEE-EEEEEETTE
T ss_pred EEECCCCC-eEEEeCCCc-----eEeeEECCEEEEEe---CCCceEEEEECCCCCEE-EE--eCC--Ccc-ceeeecCCE
Confidence 66666333 444444432 23456677888887 45678888888754322 22 122 222 235699999
Q ss_pred EEEEEeCCC-cEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeee--ccceeEEEEeeC
Q psy14130 325 LFLAGKGDG-NIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVT--QCEIFRFFKLHT 385 (494)
Q Consensus 325 l~~~g~~dg-~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~--~~~~~~~~~l~~ 385 (494)
|+.+...++ .|..-++..... ..+.. ..+ ..|+|++..+.- ..+.-.|+.+..
T Consensus 198 iy~t~~~~~~~I~~~~ldG~~~--~~Lt~----~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~ 253 (302)
T 3s25_A 198 VYYMDVNRDNAIVHVNINNPNP--VVLTE----ANI--EHYNVYGSLIFYQRGGDNPALCVVKN 253 (302)
T ss_dssp EEEEEGGGTTEEEEECSSSCCC--EECSC----SCE--EEEEEETTEEEEEECSSSCEEEEEET
T ss_pred EEEEEcCCCcEEEEEECCCCCe--EEEeC----CCc--ceEEECCCEEEEEECCCCcEEEEEEC
Confidence 977765443 455555555442 22221 223 347776665543 222356666655
|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A | Back alignment and structure |
|---|
Probab=89.05 E-value=2.9 Score=41.08 Aligned_cols=95 Identities=12% Similarity=0.094 Sum_probs=65.7
Q ss_pred EEEEeCCC----Cc-eEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCC----------ceeEeee
Q psy14130 243 VRVLDPRT----GL-VISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNT----------PLALETV 307 (494)
Q Consensus 243 v~iwd~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~----------~~~~~~~ 307 (494)
+.+.|.+. +. .+.-+....+ ...+..+|++.+++++| ..+.++.++|+++... .......
T Consensus 300 v~ViD~~~~~~~~~~~~~~iP~pks--PHGv~vsPDGkyi~v~G---KLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~ 374 (638)
T 3sbq_A 300 TPVLDGRKKDGKDSKFTRYVPVPKN--PHGCNTSSDGKYFIAAG---KLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEP 374 (638)
T ss_dssp CCEEECSCBTTBCCSSEEEEEESSS--CCCEEECTTSCEEEEEC---TTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECC
T ss_pred eeEEccccccccCCceEEEEeCCCC--CcceeeCCCCCEEEEcC---CCCCeEEEEEeehhhhhhhccccCcccceEeec
Confidence 55666655 22 2333333333 46788899999999999 8899999999874111 1112233
Q ss_pred cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCC
Q psy14130 308 DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNE 343 (494)
Q Consensus 308 ~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~ 343 (494)
....+.+..+|+++| ..|.+---|..|.-|++...
T Consensus 375 e~GlGPlHt~Fd~~G-~aYTtlfidSqvvkWni~~a 409 (638)
T 3sbq_A 375 ELGLGPLHTTFDGRG-NAYTTLFIDSQVVKWNMEEA 409 (638)
T ss_dssp BCCSCEEEEEECSSS-EEEEEETTTTEEEEEEHHHH
T ss_pred cCCCcccEEEECCCC-ceEeeeeecceEEEEeccHH
Confidence 445678899999999 66688889999999999753
|
| >3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=88.93 E-value=13 Score=33.55 Aligned_cols=175 Identities=6% Similarity=-0.026 Sum_probs=96.4
Q ss_pred CCCCCEEEEEe-CCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCC--------------CeEEEEeCCC
Q psy14130 186 PTAENVVASAG-FDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKD--------------KTVRVLDPRT 250 (494)
Q Consensus 186 p~~~~~l~s~s-~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d--------------~~v~iwd~~~ 250 (494)
++++.+.++.. .++.|...+..... ...+.. .. +--++++|..|+-+... ..|+..++..
T Consensus 23 ~~g~~iy~~n~~d~~~ly~~~~dg~~-~~~l~~--~~--~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg 97 (302)
T 3s25_A 23 ESDGEVFFSNTNDNGRLYAMNIDGSN-IHKLSN--DT--AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNG 97 (302)
T ss_dssp EETTEEEEEEGGGTTEEEEEETTSCS-CEEEEE--EE--EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTS
T ss_pred EeCCEEEEEeCCCCceEEEEcCCCCC-CEEccC--Cc--eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCC
Confidence 34433444432 24566666764333 333331 11 23457788888877543 4677788876
Q ss_pred CceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEe
Q psy14130 251 GLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGK 330 (494)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~ 330 (494)
++.. .+.. . ....++++++.|+.+.+++.....|..-++.... ...+. .+. + ..++++++.|+.+..
T Consensus 98 ~~~~-~l~~--~---~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt--~~~--~--~~~~~~g~~iy~t~~ 164 (302)
T 3s25_A 98 HGST-VLDP--D---PCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIK--NHY--L--FTCNTSDRYFYYNNP 164 (302)
T ss_dssp CCCE-EEEC--S---CEEEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEE--SSC--C--CCSEEETTEEEEECT
T ss_pred Ccce-Eeec--C---CccEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEe--CCC--c--eEeeEECCEEEEEeC
Confidence 6522 2221 1 2235677777887765333456677777776433 22222 121 2 457889999988866
Q ss_pred CCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 331 GDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 331 ~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
+...|..-++..+.. ..+.. ... ...++|++..+.-. .+..+|+++..
T Consensus 165 g~~~Iy~~~l~g~~~-~~l~~-----~~~-~~~~~P~g~~iy~t~~~~~~~I~~~~l 214 (302)
T 3s25_A 165 KNGQLYRYDTASQSE-ALFYD-----CNC-YKPVVLDDTNVYYMDVNRDNAIVHVNI 214 (302)
T ss_dssp TTCCEEEEETTTTEE-EEEEC-----SCE-EEEEEEETTEEEEEEGGGTTEEEEECS
T ss_pred CCceEEEEECCCCCE-EEEeC-----CCc-cceeeecCCEEEEEEcCCCcEEEEEEC
Confidence 667788878766543 22221 122 23466887766543 22256776655
|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A | Back alignment and structure |
|---|
Probab=87.97 E-value=22 Score=35.06 Aligned_cols=192 Identities=10% Similarity=-0.006 Sum_probs=112.3
Q ss_pred CEEEEEe-CCCeEEEEECCCCeEEEEec-CCCCceEEEEEc--CCCCEEEEEeC-------CCeE------------EEE
Q psy14130 190 NVVASAG-FDYLIILWDVGKGEALTVID-CHPDVINCLSFN--RDGSRLVTTCK-------DKTV------------RVL 246 (494)
Q Consensus 190 ~~l~s~s-~d~~v~iwd~~~~~~~~~~~-~h~~~v~~l~~~--~~~~~l~s~~~-------d~~v------------~iw 246 (494)
++|+.-. ....|-..++..-++-..++ .....+.++.|- |+-.+++.++. ||.. ...
T Consensus 143 rylfiNdkan~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~i 222 (638)
T 3sbq_A 143 KYLFINDKANSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAI 222 (638)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEE
T ss_pred EEEEEecCCCcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEEEE
Confidence 3454444 56678888888777655443 245678888886 67777777764 3221 112
Q ss_pred eCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecC-----------CCCce-------------------------E
Q psy14130 247 DPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSR-----------HSDRQ-------------------------V 290 (494)
Q Consensus 247 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~-----------~~d~~-------------------------i 290 (494)
|..+.+...++.-. +. ...+...++++..++++|+. ++... |
T Consensus 223 D~~tm~v~~Qv~v~-gn-ld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv 300 (638)
T 3sbq_A 223 DAETMEMAFQVIVD-GN-LDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKT 300 (638)
T ss_dssp ETTTCSEEEEEEES-SC-CCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCC
T ss_pred cCCccEEEEEEEcC-CC-hhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCe
Confidence 33333333332221 11 34455567777788887631 11123 4
Q ss_pred EEEeCCC----CCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCc---------eEEecccccCCC
Q psy14130 291 GLWDEND----LNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERP---------YIHFLNQSLSGA 357 (494)
Q Consensus 291 ~iwd~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~---------~~~~~~~~~~~~ 357 (494)
.+.|.+. ... . +..+......-.+..+|||++++++|..+.++.++|++.-.. -.....+...+-
T Consensus 301 ~ViD~~~~~~~~~~-~-~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl 378 (638)
T 3sbq_A 301 PVLDGRKKDGKDSK-F-TRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL 378 (638)
T ss_dssp CEEECSCBTTBCCS-S-EEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS
T ss_pred eEEccccccccCCc-e-EEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC
Confidence 4444443 111 1 111122234455788999999999999999999999984211 001112233355
Q ss_pred CeeEEEEecCCceeee--ccceeEEEEeeC
Q psy14130 358 PQRGLGFMPKRGCDVT--QCEIFRFFKLHT 385 (494)
Q Consensus 358 ~v~~~~~~p~~~~~~~--~~~~~~~~~l~~ 385 (494)
.....+|.++|....+ -|..+--|++..
T Consensus 379 GPlHt~Fd~~G~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 379 GPLHTTFDGRGNAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp CEEEEEECSSSEEEEEETTTTEEEEEEHHH
T ss_pred cccEEEECCCCceEeeeeecceEEEEeccH
Confidence 5788999999965555 389999999876
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=87.51 E-value=28 Score=35.74 Aligned_cols=203 Identities=9% Similarity=0.008 Sum_probs=99.1
Q ss_pred EEEEE-EcCCCCCEEEEEeCCC----eEEEEECCCCeEEE-Eec-CCCC------ceEEEEEcCCCCEEEEEe-------
Q psy14130 179 VGYIE-WHPTAENVVASAGFDY----LIILWDVGKGEALT-VID-CHPD------VINCLSFNRDGSRLVTTC------- 238 (494)
Q Consensus 179 V~~~~-~~p~~~~~l~s~s~d~----~v~iwd~~~~~~~~-~~~-~h~~------~v~~l~~~~~~~~l~s~~------- 238 (494)
...+. ++|++...+++-|..| .++++|+.+++.+. .+. .-+. ....++|..++..+++..
T Consensus 131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~ 210 (711)
T 4hvt_A 131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEIT 210 (711)
T ss_dssp EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBC
T ss_pred EeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcC
Confidence 34555 8999866666666544 79999999998652 111 0000 113447874444444321
Q ss_pred ---CCCeEEEEeCCCCc--eEEEeeecCCCCceEEEEECCCCe----EEEEEecCCCCceEEEEeCCCCCCceeEeeecC
Q psy14130 239 ---KDKTVRVLDPRTGL--VISQGVCHPGTRSSKAVFIGDTGR----IVTTGFSRHSDRQVGLWDENDLNTPLALETVDS 309 (494)
Q Consensus 239 ---~d~~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~----l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 309 (494)
...+|+.|.+.+.. -...+...............+++. ++...........+.+.|...............
T Consensus 211 ~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 290 (711)
T 4hvt_A 211 SSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMPS 290 (711)
T ss_dssp TTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSCT
T ss_pred cCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecCC
Confidence 13578888877653 223333333331223333444442 333321112335677777654222211111111
Q ss_pred CCceEEeEEeCCCCEEEEEE---------eCCCcEEEEEeeCCC-------ceEEecccccCCCCeeEEEEecCCceeee
Q psy14130 310 SSGVLFPYYDHDTRILFLAG---------KGDGNIRYYELTNER-------PYIHFLNQSLSGAPQRGLGFMPKRGCDVT 373 (494)
Q Consensus 310 ~~~v~~~~~~~~~~~l~~~g---------~~dg~i~~wd~~~~~-------~~~~~~~~~~~~~~v~~~~~~p~~~~~~~ 373 (494)
... +....++..++.+. ...+.|...|+.++. .....+. ......+.++.|..+..++..
T Consensus 291 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~l~~~~ 366 (711)
T 4hvt_A 291 DAT---LQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFT-PTANEVFNFISTTKDRVFLAT 366 (711)
T ss_dssp TCE---EEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEEC-CCTTEEEEEEEECSSCEEEEE
T ss_pred cce---EeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEEC-CCCCCeEEEEEEECCEEEEEE
Confidence 111 23344555543221 146779999987642 2222222 222456788899887544433
Q ss_pred c-ccee--EEEEeeC
Q psy14130 374 Q-CEIF--RFFKLHT 385 (494)
Q Consensus 374 ~-~~~~--~~~~l~~ 385 (494)
. ++.. .++++..
T Consensus 367 ~~~~~~~l~~~~~~~ 381 (711)
T 4hvt_A 367 YDNVVAKVVTFTLEN 381 (711)
T ss_dssp EETTEEEEEEECEET
T ss_pred EECCEEEEEEEECCC
Confidence 2 4444 4444443
|
| >2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A | Back alignment and structure |
|---|
Probab=85.03 E-value=16 Score=35.32 Aligned_cols=104 Identities=13% Similarity=0.172 Sum_probs=60.9
Q ss_pred ceEEEEECCCC-eEEEEEecCCCCceEEEEeCCCCC--Ccee-Ee--eec-----CCCceEEeEEeCC---CCEEEEEEe
Q psy14130 265 SSKAVFIGDTG-RIVTTGFSRHSDRQVGLWDENDLN--TPLA-LE--TVD-----SSSGVLFPYYDHD---TRILFLAGK 330 (494)
Q Consensus 265 ~~~~~~~~~~~-~l~~~g~~~~~d~~i~iwd~~~~~--~~~~-~~--~~~-----~~~~v~~~~~~~~---~~~l~~~g~ 330 (494)
...++|.|++. +++++- ..|.|++++..... .+.. +. ... ...+...++++|+ ..+||++-+
T Consensus 16 P~~~a~~pdG~~rl~V~e----r~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt 91 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFILE----KEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYT 91 (463)
T ss_dssp EEEEECCSSSSCCEEEEE----TTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEE
T ss_pred ceEEEECCCCCeEEEEEe----CCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEe
Confidence 68899999964 688877 78999999754221 1111 10 001 1357888999997 456667644
Q ss_pred CC------------CcEEEEEeeCC----------CceEEecccccCCCCeeEEEEecCCceeee
Q psy14130 331 GD------------GNIRYYELTNE----------RPYIHFLNQSLSGAPQRGLGFMPKRGCDVT 373 (494)
Q Consensus 331 ~d------------g~i~~wd~~~~----------~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~ 373 (494)
.+ ..|.-|.+..+ +.+.... ..........|+|.|||.+.++
T Consensus 92 ~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~-~~~~~H~g~~l~fgpDG~LYv~ 155 (463)
T 2wg3_C 92 TNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVA-ELHRKHLGGQLLFGPDGFLYII 155 (463)
T ss_dssp ECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEE-ESSSSSCEEEEEECTTSCEEEE
T ss_pred CCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcC-CCCCcccCCcEeECCCCcEEEE
Confidence 21 13444665431 1122211 1112234688999999988776
|
| >2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=83.92 E-value=3.6 Score=37.88 Aligned_cols=109 Identities=10% Similarity=-0.005 Sum_probs=65.0
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEEecCC-CCceEEEEEc--C-CCCEEEEE-eCCCeEEEEeCCCCceEEEeeecCCCC
Q psy14130 190 NVVASAGFDYLIILWDVGKGEALTVIDCH-PDVINCLSFN--R-DGSRLVTT-CKDKTVRVLDPRTGLVISQGVCHPGTR 264 (494)
Q Consensus 190 ~~l~s~s~d~~v~iwd~~~~~~~~~~~~h-~~~v~~l~~~--~-~~~~l~s~-~~d~~v~iwd~~~~~~~~~~~~~~~~~ 264 (494)
.+++.++.||.|.-.|..+|+.+.+++.. ..++....-. + ++..++.. +.||.|..+|..+|.....+.......
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 47888999999999999999999888743 1222221100 1 22333333 589999999998886544333211000
Q ss_pred ceEEEEE-----------CCCCeEEEEEecCCCCceEEEEeCCCCCCce
Q psy14130 265 SSKAVFI-----------GDTGRIVTTGFSRHSDRQVGLWDENDLNTPL 302 (494)
Q Consensus 265 ~~~~~~~-----------~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~ 302 (494)
..-+... ..++.+++ | +.++.+.-.|+++++..-
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~-G---s~~g~l~ald~~tG~~~W 135 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYT-G---SMRTIMYTINMLNGEIIS 135 (339)
T ss_dssp TCSEEEECC----------CCEEEEE-C---EEEEEEEEEETTTCCEEE
T ss_pred ccccccCCCceeecccccccCCEEEE-E---ecCCEEEEEECCCCcEEE
Confidence 1111111 13244444 4 479999999998876543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 494 | ||||
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 7e-14 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 2e-13 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 6e-07 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 9e-05 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 7e-14 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 4e-12 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 9e-05 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 4e-11 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 3e-08 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 4e-09 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 6e-05 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 2e-04 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 2e-07 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 2e-06 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 1e-05 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 3e-07 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 7e-06 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 4e-04 | |
| d1pbyb_ | 337 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 4e-07 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 7e-07 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 2e-06 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 3e-04 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 0.002 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 2e-06 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 0.001 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 2e-06 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 1e-05 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 1e-05 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 1e-04 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 5e-04 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 2e-05 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 5e-04 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 4e-05 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 5e-05 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 6e-05 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 7e-05 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 5e-05 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 2e-04 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 1e-04 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 5e-04 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 5e-04 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 0.001 | |
| d2bbkh_ | 355 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 4e-04 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 0.001 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 0.002 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 0.003 | |
| d1mdah_ | 368 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 0.002 |
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 70.2 bits (170), Expect = 7e-14
Identities = 39/234 (16%), Positives = 71/234 (30%), Gaps = 24/234 (10%)
Query: 14 WNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEV 73
N + I S S D T + + C R + +A +
Sbjct: 108 SIMPNGDHIVSASRDKTIKMW---EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 164
Query: 74 AGGGAFLVLPIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAV 133
R V + + + H C P + + S + K
Sbjct: 165 Q---------TVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGK 215
Query: 134 VTEVAGGGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVA 193
G+ +K+W + G +M L GH V + +H +
Sbjct: 216 PGPFLLSGSR----DKTIKMWDVSTG-------MCLMTLVGHDNWVRGVLFHSG-GKFIL 263
Query: 194 SAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLD 247
S D + +WD + ++ H + L F++ +VT D+TV+V +
Sbjct: 264 SCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 68.6 bits (166), Expect = 2e-13
Identities = 45/307 (14%), Positives = 89/307 (28%), Gaps = 24/307 (7%)
Query: 6 RGPVLDIKWNPFNDNIIASCSDDCTFR---------------HVYGVHSKRDGCYDNVPI 50
R PV + ++P +++ S S+D T + H V +
Sbjct: 17 RSPVTRVIFHP-VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 75
Query: 51 TRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRFRGVRSSKFRHVYGVHSKRDGCYD 110
+ +A + F + T + I S R + Y
Sbjct: 76 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYC 135
Query: 111 NVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLSGNLNEWIM 170
T + N + + + + + + + W
Sbjct: 136 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAP 195
Query: 171 D---LHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSF 227
+ + + + S D I +WDV G L + H + + + F
Sbjct: 196 ESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLF 255
Query: 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSD 287
+ G +++ DKT+RV D + + H +S F +VT D
Sbjct: 256 HSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTS-LDFHKTAPYVVTGS----VD 310
Query: 288 RQVGLWD 294
+ V +W+
Sbjct: 311 QTVKVWE 317
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 49.0 bits (115), Expect = 6e-07
Identities = 31/178 (17%), Positives = 64/178 (35%), Gaps = 9/178 (5%)
Query: 172 LHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDG 231
L GH+ V + +HP +V+ SA D I +WD G+ + H D + +SF+ G
Sbjct: 13 LSGHRSPVTRVIFHPV-FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 71
Query: 232 SRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVG 291
L + D T+++ D + + + S + + IV+ +
Sbjct: 72 KLLASCSADMTIKLWDFQGF-ECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKT------ 124
Query: 292 LWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHF 349
++ T ++T + + L + D +R + + +
Sbjct: 125 -IKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 181
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 42.0 bits (97), Expect = 9e-05
Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Query: 203 LWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPG 262
W E + H + + F+ S +V+ +D T++V D TG H
Sbjct: 2 EWIPRPPE-KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD 60
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 70.5 bits (171), Expect = 7e-14
Identities = 38/300 (12%), Positives = 72/300 (24%), Gaps = 25/300 (8%)
Query: 6 RGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKR----DGCYDNVPITRNAHDSHFCA 61
+ + W + ++ S S D + + V A ++ A
Sbjct: 55 LAKIYAMHWGT-DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVA 113
Query: 62 ANPKFVAVVTEVAGGGAFLVLPIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDS 121
V G + ++ + ++
Sbjct: 114 CGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIET 173
Query: 122 HFCAANPKFVAVVTEVAGGGAFLVLPI-----HRVKLWYIPDGGLSGNLNEWIMDLHGHK 176
L + KLW + +G GH+
Sbjct: 174 GQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREG-------MCRQTFTGHE 226
Query: 177 RRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDV--INCLSFNRDGSRL 234
+ I + P N A+ D L+D+ + L + I +SF++ G L
Sbjct: 227 SDINAICFFPN-GNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLL 285
Query: 235 VTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWD 294
+ D V D H S D + T D + +W+
Sbjct: 286 LAGYDDFNCNVWDALKADRAGVLAGHDNRVSC-LGVTDDGMAVATGS----WDSFLKIWN 340
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 65.1 bits (157), Expect = 4e-12
Identities = 29/169 (17%), Positives = 47/169 (27%), Gaps = 6/169 (3%)
Query: 168 WIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSF 227
+ S D LWDV +G H IN + F
Sbjct: 175 QQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICF 234
Query: 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSD 287
+G+ T D T R+ D R + +V +GR++ G + D
Sbjct: 235 FPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAG---YDD 291
Query: 288 RQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIR 336
+WD + L + V D + D ++
Sbjct: 292 FNCNVWDALKADRAGVLA--GHDNRVSCLGVTDDGMAVATGSW-DSFLK 337
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 42.0 bits (97), Expect = 9e-05
Identities = 14/79 (17%), Positives = 30/79 (37%), Gaps = 1/79 (1%)
Query: 172 LHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDG 231
L GH ++ + W ++ SA D +I+WD + I + ++ G
Sbjct: 51 LRGHLAKIYAMHWGTD-SRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 232 SRLVTTCKDKTVRVLDPRT 250
+ + D + + +T
Sbjct: 110 NYVACGGLDNICSIYNLKT 128
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 62.1 bits (149), Expect = 4e-11
Identities = 28/163 (17%), Positives = 53/163 (32%), Gaps = 22/163 (13%)
Query: 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGK 208
V++W G L L+ GHK V + + V S D + LW++
Sbjct: 227 RAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRD-GQSVVSGSLDRSVKLWNLQN 285
Query: 209 GEALT------------VIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQ 256
+ H D + ++ ++ +++ KD+ V D ++G +
Sbjct: 286 ANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLM 345
Query: 257 GVCHPGTRSSKAV-----FIGDTGRIVTTGFSRHSDRQVGLWD 294
H + S AV + T D + +W
Sbjct: 346 LQGHRNSVISVAVANGSSLGPEYNVFATGS----GDCKARIWK 384
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 53.3 bits (126), Expect = 3e-08
Identities = 34/268 (12%), Positives = 71/268 (26%), Gaps = 26/268 (9%)
Query: 6 RGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPK 65
+ + ++P + +A+ ++D R + K + D
Sbjct: 121 DLYIRSVCFSP-DGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLV 179
Query: 66 FVAVVTEV-----------------AGGGAFLVLPIHRFRGVRSSKFRHVYGVHSKRDGC 108
+ V G V P S R V S+
Sbjct: 180 SGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFL 239
Query: 109 YDNVPITRNAHDSHFCAANP-KFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLSGNLNE 167
+ + + H + F V G + + ++ + N
Sbjct: 240 VERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGT 299
Query: 168 WIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCL-- 225
+ GHK V + + + S D ++ WD G L ++ H + + +
Sbjct: 300 CEVTYIGHKDFVLSVATTQN-DEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAV 358
Query: 226 ----SFNRDGSRLVTTCKDKTVRVLDPR 249
S + + T D R+ +
Sbjct: 359 ANGSSLGPEYNVFATGSGDCKARIWKYK 386
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 55.7 bits (132), Expect = 4e-09
Identities = 31/256 (12%), Positives = 55/256 (21%), Gaps = 16/256 (6%)
Query: 6 RGPVLDIKWNPFNDNIIASCSDDCTFRHVY------------GVHSKRDGCYDNVPITRN 53
K +P + AS R V S ++
Sbjct: 58 SHQTTVAKTSP-SGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKR 116
Query: 54 AHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRFRGVRSSKFRHVYGVHSKRDGCYDNVP 113
V + G S +
Sbjct: 117 IAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEG 176
Query: 114 ITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLH 173
+ A + L+ DG +G + +
Sbjct: 177 PPFKFKSTFGEHTKFVHSVRYNPDGSLFASTG-GDGTIVLYNGVDGTKTGVFEDDSLKNV 235
Query: 174 GHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVIN-CLSFNRDGS 232
H V + W P +ASA D I +W+V + I + + L
Sbjct: 236 AHSGSVFGLTWSPD-GTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQ 294
Query: 233 RLVTTCKDKTVRVLDP 248
LV+ + + ++P
Sbjct: 295 ALVSISANGFINFVNP 310
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 42.6 bits (98), Expect = 6e-05
Identities = 9/74 (12%), Positives = 17/74 (22%), Gaps = 2/74 (2%)
Query: 178 RVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTT 237
+ P + + G + VG + H + G +
Sbjct: 19 TAVVLGNTPAGDKIQYCNGTS--VYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASG 76
Query: 238 CKDKTVRVLDPRTG 251
VR+ D
Sbjct: 77 DVHGNVRIWDTTQT 90
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 41.4 bits (95), Expect = 2e-04
Identities = 11/78 (14%), Positives = 30/78 (38%), Gaps = 4/78 (5%)
Query: 217 CHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGR 276
H + L+++ DG+++ + DKT+++ + T V + I
Sbjct: 236 AHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQA 295
Query: 277 IVTTGFSRHSDRQVGLWD 294
+V+ ++ + +
Sbjct: 296 LVSIS----ANGFINFVN 309
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 51.0 bits (120), Expect = 2e-07
Identities = 10/69 (14%), Positives = 26/69 (37%), Gaps = 3/69 (4%)
Query: 182 IEWHPTAENVVASAGFDYLIILWDV--GKGEALTVIDCHPDVINCLSFNRDGSRLVTTCK 239
W+ +A ++ + +++ K + + H + + + D +R+VT
Sbjct: 13 HAWNKDR-TQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGT 71
Query: 240 DKTVRVLDP 248
D+ V
Sbjct: 72 DRNAYVWTL 80
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 47.2 bits (110), Expect = 2e-06
Identities = 36/322 (11%), Positives = 72/322 (22%), Gaps = 30/322 (9%)
Query: 6 RGPVLDIKWNPFNDNIIASCSDDCTFR----------HVYGVHSKRDGCYDNVPITRNAH 55
G V + W P + N I +C D +
Sbjct: 51 NGQVTGVDWAP-DSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKK 109
Query: 56 DSHFCAANPKFVAVVTEVAGGGAFLVLPIHRFRGVRSSKFRHVYGVHSKRDGCYD----- 110
+ + + + + V S + + + +
Sbjct: 110 FAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFS 169
Query: 111 -NVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLSGNLNEWI 169
+ + F ++ E + ++ + +
Sbjct: 170 AYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLAD 229
Query: 170 MDLHGHKRRVGYI-----EWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINC 224
D + E+ + +AG D +L+ DV
Sbjct: 230 ADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQ 289
Query: 225 LSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTG---RIVTTG 281
S +R DK + H + S +V G + TTG
Sbjct: 290 SSQRGLTARERFQNLDKKASSEGSAAAGAGLDSL-HKNSVSQISVLSGGKAKCSQFCTTG 348
Query: 282 FSRHSDRQVGLWDENDLNTPLA 303
D + +WD L + L
Sbjct: 349 ----MDGGMSIWDVRSLESALK 366
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 45.2 bits (105), Expect = 1e-05
Identities = 10/77 (12%), Positives = 25/77 (32%), Gaps = 3/77 (3%)
Query: 218 HPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRI 277
+ I+C ++N+D +++ + V + + + V
Sbjct: 6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNR 65
Query: 278 VTTGFSRHSDRQVGLWD 294
+ T +DR +W
Sbjct: 66 IVTC---GTDRNAYVWT 79
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.2 bits (118), Expect = 3e-07
Identities = 49/332 (14%), Positives = 99/332 (29%), Gaps = 26/332 (7%)
Query: 17 FNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGG 76
F N I S SDD T + V+ + + T H + + +
Sbjct: 25 FCGNRIVSGSDDNTLK-VWSAVTGK------CLRTLVGHTGGVWS-----SQMRDNIIIS 72
Query: 77 GAFLVLPIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTE 136
G+ + R + + D+ + + +
Sbjct: 73 GSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHV 132
Query: 137 VAGGGAFLVLPIHRVK--LWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVAS 194
+ G A + + + + D + E LH + + V S
Sbjct: 133 LMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVS 192
Query: 195 AGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVI 254
D I +WDV G + + H + + + + LV+ D TV++ D +TG +
Sbjct: 193 GSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCL 250
Query: 255 SQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEND---LNTPLALETVDSSS 311
+S+ + ++T+ D V LWD + + LE+ S
Sbjct: 251 QTLQGPNKHQSAVTCLQFNKNFVITSS----DDGTVKLWDLKTGEFIRNLVTLESGGSGG 306
Query: 312 GVLFPYYDHDTRILFLA---GKGDGNIRYYEL 340
V + + + G + + +
Sbjct: 307 VVWRIRASNTKLVCAVGSRNGTEETKLLVLDF 338
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.6 bits (106), Expect = 7e-06
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 204 WDVGKGEALTVIDCHPD-VINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPG 262
W G+ ++ V+ H D VI CL F G+R+V+ D T++V TG + V H G
Sbjct: 1 WRRGELKSPKVLKGHDDHVITCLQF--CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG 58
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.2 bits (92), Expect = 4e-04
Identities = 11/59 (18%), Positives = 18/59 (30%), Gaps = 2/59 (3%)
Query: 172 LHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRD 230
L GH V N + S D + +W G+ L + H + +
Sbjct: 12 LKGHDDHV-ITCLQFC-GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN 68
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Score = 49.4 bits (116), Expect = 4e-07
Identities = 22/246 (8%), Positives = 54/246 (21%), Gaps = 15/246 (6%)
Query: 11 DIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVV 70
+P + S + V R YD A + +
Sbjct: 86 GAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYD----AETLSRRKAFEAPRQITMLA 141
Query: 71 TEVAGGGAFLVLPIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKF 130
G + + + + S Y + +
Sbjct: 142 WARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATP 201
Query: 131 VAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAEN 190
+ + + G + + ++ +P
Sbjct: 202 FYTARKDIDPADPTAYR-TGLLTMDLETGEM------AMREVRIMDVFYFSTAVNPAK-- 252
Query: 191 VVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRT 250
+ G ++ +D+ K ++ + P ++ + DGS + + D T
Sbjct: 253 -TRAFGAYNVLESFDLEKNASIKRVP-LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAET 310
Query: 251 GLVISQ 256
Q
Sbjct: 311 LEKKGQ 316
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 49.0 bits (115), Expect = 7e-07
Identities = 24/247 (9%), Positives = 61/247 (24%), Gaps = 12/247 (4%)
Query: 9 VLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVA 68
+ +P + A+ + Y V R + F P+ V
Sbjct: 91 MYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTF--PMPRQVY 148
Query: 69 VVTEVAGGGAFLVLPIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANP 128
++ G ++ P V++ K+ + + Y +
Sbjct: 149 LMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFS 208
Query: 129 KFVAVVTEVAGGGAFLVLPI-HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPT 187
+ + + + G P
Sbjct: 209 MLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFAD------LTELYFTGLRSPK 262
Query: 188 AENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLD 247
N + + +D+ + + + + C++F++ G +L + V +
Sbjct: 263 DPNQIYGV--LNRLAKYDLKQRKLIKAAN-LDHTYYCVAFDKKGDKLYLGGTFNDLAVFN 319
Query: 248 PRTGLVI 254
P T +
Sbjct: 320 PDTLEKV 326
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.5 bits (111), Expect = 2e-06
Identities = 51/294 (17%), Positives = 85/294 (28%), Gaps = 39/294 (13%)
Query: 17 FNDNIIASCSDDCTFR----------HVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKF 66
++D I S D T + + H+ C S
Sbjct: 23 YDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCL-QYDERVIITGSSDSTVRVWD 81
Query: 67 VAVVTEVAGGGAFLVLPIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAA 126
V + +H + D R H A
Sbjct: 82 VNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAV 141
Query: 127 NPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHP 186
N V+ G +K+W E++ L+GHKR + +++
Sbjct: 142 NVVDFDDKYIVSASGD------RTIKVWNTSTC-------EFVRTLNGHKRGIACLQYRD 188
Query: 187 TAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVL 246
+V S D I LWD+ G L V++ H +++ C D R+V+ D ++V
Sbjct: 189 ---RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRC--IRFDNKRIVSGAYDGKIKVW 243
Query: 247 DPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRH------SDRQVGLWD 294
D L P + +GR+ F D + +WD
Sbjct: 244 DLVAALDPRA----PAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWD 293
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.2 bits (92), Expect = 3e-04
Identities = 13/54 (24%), Positives = 23/54 (42%), Gaps = 5/54 (9%)
Query: 212 LTVIDCHPDV---INCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPG 262
L I C + + CL + D ++V+ +D T+++ D T H G
Sbjct: 5 LQRIHCRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTG 56
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.9 bits (86), Expect = 0.002
Identities = 11/60 (18%), Positives = 22/60 (36%), Gaps = 3/60 (5%)
Query: 169 IMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228
I + V +++ + S D I +WD E ++ H + CL ++
Sbjct: 8 IHCRSETSKGVYCLQYDD---QKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYD 64
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 47.5 bits (111), Expect = 2e-06
Identities = 7/81 (8%), Positives = 20/81 (24%), Gaps = 6/81 (7%)
Query: 173 HGHKRRVGYIEWHPTAEN--VVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRD 230
+ + E A +++ +DV + + + L + D
Sbjct: 270 IPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTE----VKNNLTDLRLSAD 325
Query: 231 GSRLVTTCKDKTVRVLDPRTG 251
++ D +
Sbjct: 326 RKTVMVRKDDGKIYTFPLEKP 346
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 38.7 bits (88), Expect = 0.001
Identities = 11/152 (7%), Positives = 30/152 (19%), Gaps = 15/152 (9%)
Query: 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHP------TAENVVASAGFDYLII 202
S + + + P E + I
Sbjct: 200 SLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPI 259
Query: 203 LWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPG 262
D G + ++ + + + + + D +T V
Sbjct: 260 NVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTE----VKN 315
Query: 263 TRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWD 294
+ D ++ D ++ +
Sbjct: 316 NLTDLR-LSADRKTVMVRK----DDGKIYTFP 342
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.5 bits (111), Expect = 2e-06
Identities = 34/297 (11%), Positives = 68/297 (22%), Gaps = 19/297 (6%)
Query: 5 YRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANP 64
+ V + + + + C V+ + + + N +
Sbjct: 50 HGEVVCAVTISN-PTRHVYTGGKGCV--KVWDISHPGNKSPVSQLDCLNRDNYIRSCK-- 104
Query: 65 KFVAVVTEVAGGGAFLVLPIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFC 124
+ + GG L I + +
Sbjct: 105 -LLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG 163
Query: 125 AANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEW 184
+ T V G N R++ ++
Sbjct: 164 NIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDF 223
Query: 185 HPTAENVVASAGFDYLIILWDVGKGEALTVI-------DCHPDVINCLSFNRDGSRLVTT 237
++ ++L + + E L V H + L F G V+T
Sbjct: 224 TSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVST 283
Query: 238 CKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWD 294
KD + G I Q + S D IVT D++ +++
Sbjct: 284 GKDNLLNAWRTPYGASIFQ-SKESSSVLS-CDISVDDKYIVTGS----GDKKATVYE 334
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 45.2 bits (105), Expect = 1e-05
Identities = 11/76 (14%), Positives = 23/76 (30%), Gaps = 2/76 (2%)
Query: 212 LTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSS--KAV 269
+ + D I+ + S L+ T D ++ V + +
Sbjct: 4 VQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCN 63
Query: 270 FIGDTGRIVTTGFSRH 285
FI +T + G +
Sbjct: 64 FIDNTDLQIYVGTVQG 79
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 44.8 bits (104), Expect = 1e-05
Identities = 29/267 (10%), Positives = 64/267 (23%), Gaps = 29/267 (10%)
Query: 5 YRGPVLDIKWNPFNDNIIASCS----------DDCTFRHVYGVHSKRDGCYDNVPITRNA 54
Y+ P+L + D I + + G +
Sbjct: 55 YKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDK 114
Query: 55 HDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRFRGVRSSKFRHVYG---VHSKRDGCYDN 111
+ + + G A L + + + +
Sbjct: 115 LIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQW 174
Query: 112 VPITRNAHDSHFCAANPKFVAVVTEVA----GGGAFLVLPIHRVKLWYIPDGGLSGNL-- 165
+ D+ + + G RV + + D G N
Sbjct: 175 FRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSK 234
Query: 166 ------NEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEAL-TVIDCH 218
+ + V IE+ P + +AG D +I W++ + + +
Sbjct: 235 RFAFRCHRLNLKDTNLAYPVNSIEFSPR-HKFLYTAGSDGIISCWNLQTRKKIKNFAKFN 293
Query: 219 PDVINCLSFNRDGSRLVTTCKDKTVRV 245
D + ++ + L D T +
Sbjct: 294 EDSVVKIAC--SDNILCLATSDDTFKT 318
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 41.8 bits (96), Expect = 1e-04
Identities = 6/70 (8%), Positives = 23/70 (32%), Gaps = 4/70 (5%)
Query: 172 LHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDC---HPDVINCLSFN 228
K + I+ P+ ++++ +D + ++ + + + C +F
Sbjct: 7 EQAPKDYISDIKIIPS-KSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFI 65
Query: 229 RDGSRLVTTC 238
+ +
Sbjct: 66 DNTDLQIYVG 75
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 39.8 bits (91), Expect = 5e-04
Identities = 31/320 (9%), Positives = 78/320 (24%), Gaps = 40/320 (12%)
Query: 9 VLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDS-----HFCAAN 63
+ DIK P + +++ S D + V+ + + + +F
Sbjct: 14 ISDIKIIP-SKSLLLITSWDGSLT----VYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNT 68
Query: 64 PKFVAVVTEVAGGGAFLVLPIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHF 123
+ V T ++ F+ + +++ K +
Sbjct: 69 DLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVID 128
Query: 124 CAAN------PKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGL------SGNLNEWIMD 171
K + F + + + + + + ++
Sbjct: 129 PRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIE 188
Query: 172 LHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVI---------------D 216
G K ++ + P + A + D + +
Sbjct: 189 ESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDT 248
Query: 217 CHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGR 276
+N + F+ L T D + + +T I V I +
Sbjct: 249 NLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKN---FAKFNEDSVVKIACSDN 305
Query: 277 IVTTGFSRHSDRQVGLWDEN 296
I+ S + + D+
Sbjct: 306 ILCLATSDDTFKTNAAIDQT 325
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 44.1 bits (102), Expect = 2e-05
Identities = 29/291 (9%), Positives = 60/291 (20%), Gaps = 33/291 (11%)
Query: 7 GPVLDIKWNPFND-NIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPK 65
V +K++P + S + N + A
Sbjct: 64 SVVTTVKFSPIKGSQYLCSGDESGKVIV----WGWTFDKESNSVEVNVKSEFQVLAGPIS 119
Query: 66 FVAVVTEVAGGGAFLVLPIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCA 125
++ + R + V RD +
Sbjct: 120 DISW----------------------DFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSG 157
Query: 126 ANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWH 185
+ + A + + + + ++Y + R V +
Sbjct: 158 HSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDS 217
Query: 186 PTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRV 245
V S + + D + T D T+RV
Sbjct: 218 GEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRV 277
Query: 246 LDPRTGLVIS--QGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWD 294
D T + V GRI++ D + ++
Sbjct: 278 WDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLS----LDGTLNFYE 324
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 39.9 bits (91), Expect = 5e-04
Identities = 17/128 (13%), Positives = 36/128 (28%), Gaps = 10/128 (7%)
Query: 175 HKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDC---HPDVINCLSF--NR 229
+ ++ + PT + G + D G + V+ V+ + F +
Sbjct: 16 QRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIK 75
Query: 230 DGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQ 289
L + + V V + + K+ F G I + R
Sbjct: 76 GSQYLCSGDESGKVIVWGWTFD-----KESNSVEVNVKSEFQVLAGPISDISWDFEGRRL 130
Query: 290 VGLWDEND 297
+ + D
Sbjct: 131 CVVGEGRD 138
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 43.4 bits (100), Expect = 4e-05
Identities = 12/58 (20%), Positives = 22/58 (37%), Gaps = 2/58 (3%)
Query: 172 LHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVI-DCHPDVINCLSFN 228
+GH + + + + SA + I WD+ G + V D H +I +
Sbjct: 8 RYGHNKAITALSSSAD-GKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTT 64
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 43.1 bits (99), Expect = 5e-05
Identities = 33/294 (11%), Positives = 73/294 (24%), Gaps = 14/294 (4%)
Query: 6 RGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHS----KRDGCYDNVPITRNAHDSHFCA 61
+ + + + + S + + + + + IT S
Sbjct: 12 NKAITALSSSA-DGKTLFSADAEGHIN-SWDISTGISNRVFPDVHATMITGIKTTSKGDL 69
Query: 62 ANPKFVAVVTEVAGGGAFLVLPIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDS 121
+ + V GG+ + + S A S
Sbjct: 70 FTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACY---KHIAIYS 126
Query: 122 HFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGY 181
H + VA + + +++E +H +
Sbjct: 127 HGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVA 186
Query: 182 IEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDK 241
+ + + + + H + C+S++ D RL T D
Sbjct: 187 FSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDN 246
Query: 242 TVRVLDPRTGLVISQGVCHPGTRSS-KAVFIGDTGRIVTTGFSRHSDRQVGLWD 294
+V V + + SS +V + IV+ G D + W+
Sbjct: 247 SVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAG----QDSNIKFWN 296
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 42.7 bits (98), Expect = 6e-05
Identities = 12/46 (26%), Positives = 17/46 (36%)
Query: 209 GEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVI 254
G V H I LS + DG L + + + D TG+
Sbjct: 2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISN 47
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 42.3 bits (97), Expect = 7e-05
Identities = 21/249 (8%), Positives = 54/249 (21%), Gaps = 4/249 (1%)
Query: 1 LDKLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFC 60
++ + IK D + + S D + V S D +
Sbjct: 50 FPDVHATMITGIKTTSKGD--LFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAV 107
Query: 61 AANPKFVAVVTEVAGGGAFLVLPIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHD 120
+A+ SS G D+
Sbjct: 108 SADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSG 167
Query: 121 SHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVG 180
+ + + + ++ N +
Sbjct: 168 ASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKV 227
Query: 181 YIEWHPTAENVVASAGFDYLIILWDV--GKGEALTVIDCHPDVINCLSFNRDGSRLVTTC 238
+A+ D +I+W++ + + H + + +V+
Sbjct: 228 ACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAG 287
Query: 239 KDKTVRVLD 247
+D ++ +
Sbjct: 288 QDSNIKFWN 296
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 43.3 bits (100), Expect = 5e-05
Identities = 29/154 (18%), Positives = 53/154 (34%), Gaps = 8/154 (5%)
Query: 172 LHGHKRRV-GYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRD 230
L GH V +++ N V + D +I ++D + L + H + L +
Sbjct: 8 LRGHMTSVITCLQFED---NYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG 64
Query: 231 GSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQV 290
G LV+ D+TVRV D + G H T + + + TG D +
Sbjct: 65 G-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTG---SRDNTL 120
Query: 291 GLWDENDLNTPLALETVDSSSGVLFPYYDHDTRI 324
+W ++ V ++ +
Sbjct: 121 HVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFV 154
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 41.0 bits (94), Expect = 2e-04
Identities = 31/307 (10%), Positives = 70/307 (22%), Gaps = 26/307 (8%)
Query: 6 RGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPK 65
G V +K+ I+ S S D T R ++ T D
Sbjct: 53 DGGVWALKYAH--GGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKY 110
Query: 66 FV------------------AVVTEVAGGGAFLVLPIHRFRGVRSSKFRHVYGVHSKRDG 107
V + H+ V +
Sbjct: 111 IVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGH 170
Query: 108 CYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLSGNLNE 167
V + + + A K + +++ + R + +
Sbjct: 171 GNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDL 230
Query: 168 WIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSF 227
+L + + + + I + H ++ +F
Sbjct: 231 ENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTF 290
Query: 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSD 287
++ + + + + R+G ++ + + F G T +V D
Sbjct: 291 YVSD-NILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKT--LVAAV---EKD 344
Query: 288 RQVGLWD 294
Q L
Sbjct: 345 GQSFLEI 351
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 42.1 bits (97), Expect = 1e-04
Identities = 29/242 (11%), Positives = 71/242 (29%), Gaps = 13/242 (5%)
Query: 3 KLYRGPVLDIKWNPFND----NIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSH 58
+ + +KW ND + + + T + + +
Sbjct: 116 DMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQG 175
Query: 59 FCAANPKFVAVVTEVAGGGAFLVLPIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNA 118
+ T V L+ V+ S+ + +++ + N+
Sbjct: 176 TVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYN----FESQHSMINNS 231
Query: 119 HDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRR 178
+ +P+ + + I + + ++ + H
Sbjct: 232 NSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSW 291
Query: 179 VGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPD----VINCLSFNRDGSRL 234
V + ++ + + SAG+D + WDV E +T ++ H D + L+ + G L
Sbjct: 292 VMSLSFNDS-GETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSL 350
Query: 235 VT 236
Sbjct: 351 AE 352
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 39.8 bits (91), Expect = 5e-04
Identities = 22/164 (13%), Positives = 40/164 (24%), Gaps = 22/164 (13%)
Query: 213 TVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTG------------LVISQGVCH 260
H I +S S V+ D ++V D + V G+ H
Sbjct: 8 NAGKAHDADIFSVSA--CNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHH 65
Query: 261 PGTRSSKAVFIGDTGRIVTTGFS--------RHSDRQVGLWDENDLNTPLALETVDSSSG 312
+ + + TT FS D + E ++ +
Sbjct: 66 VDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWAL 125
Query: 313 VLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSG 356
D +A G ++ + L + S
Sbjct: 126 KWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSP 169
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 39.8 bits (91), Expect = 5e-04
Identities = 11/115 (9%), Positives = 26/115 (22%), Gaps = 16/115 (13%)
Query: 172 LHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDC------------HP 219
H + + + S D + +WD + D H
Sbjct: 10 GKAHDADIFSVSACN---SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHV 66
Query: 220 DVINCLSFN-RDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGD 273
DV+ + + + + TT + + + +
Sbjct: 67 DVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHS 121
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 38.7 bits (88), Expect = 0.001
Identities = 17/170 (10%), Positives = 41/170 (24%), Gaps = 27/170 (15%)
Query: 151 VKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYI------EWHPTAENVVASAGFDYLIILW 204
+K+W + HK + ++ E +VA+ F ++ +
Sbjct: 36 LKVWDNKLLDNENPK-DKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFY 94
Query: 205 DVGKGEALTVI----------DCHPDVINCLSFNRDG-----SRLVTTCKDKTVRVLDPR 249
+ + + + D L + RLV T T +
Sbjct: 95 RITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFH 154
Query: 250 TG-----LVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWD 294
+ + + + + + S G +
Sbjct: 155 PFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNN 204
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 40.2 bits (92), Expect = 4e-04
Identities = 27/213 (12%), Positives = 60/213 (28%), Gaps = 13/213 (6%)
Query: 68 AVVTEVAGGGAFLVLPIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNA---HDSHFC 124
+ A F+ V H++ D I A
Sbjct: 151 YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLV 210
Query: 125 AANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEW 184
+++ G A + + + DG G + + + +
Sbjct: 211 WPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQ- 269
Query: 185 HPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRL--VTTCKDKT 242
+ +++ D GE L + ++ + ++ ++D L + DKT
Sbjct: 270 ----RDEWRHKTASRFVVVLDAKTGERLAKFEMGHEI-DSINVSQDEKPLLYALSTGDKT 324
Query: 243 VRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTG 275
+ + D +G + V G + + D G
Sbjct: 325 LYIHDAESGEELRS-VNQLG-HGPQVITTADMG 355
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 38.4 bits (87), Expect = 0.001
Identities = 10/60 (16%), Positives = 22/60 (36%), Gaps = 10/60 (16%)
Query: 172 LHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDG 231
+ GH + + + +P + S +D I+ W H ++I L ++
Sbjct: 9 ISGHNKGITALTVNP-----LISGSYDGRIMEWSSSSMH-----QDHSNLIVSLDNSKAQ 58
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 37.6 bits (85), Expect = 0.002
Identities = 22/302 (7%), Positives = 57/302 (18%), Gaps = 42/302 (13%)
Query: 6 RGPVLDIKWNPFNDNIIASCSDDCTFR-------------HVYGVHSKRDGCYDNVPITR 52
+ + NP + S S D + + + + Y ++
Sbjct: 13 NKGITALTVNP-----LISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDD 67
Query: 53 NAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRFRGVRSSKFRHVYGVHSKRDGCYDNV 112
+ V G VL + S +
Sbjct: 68 TLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVS 127
Query: 113 PITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDL 172
+ L L +
Sbjct: 128 LSQNYVAVGLEEGNTIQ-------------------VFKLSDLEVSFDLKTPLRAKPSYI 168
Query: 173 HGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGS 232
+ ++ + + + I P +
Sbjct: 169 SISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEED 228
Query: 233 RLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGL 292
+ T D + + + + I + + + +V++G +D +
Sbjct: 229 LVATGSLDTNIFIYSVKRPMKIIK-ALNAHKDGVNNLLWETPSTLVSSG----ADACIKR 283
Query: 293 WD 294
W+
Sbjct: 284 WN 285
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 37.2 bits (84), Expect = 0.003
Identities = 12/58 (20%), Positives = 23/58 (39%), Gaps = 8/58 (13%)
Query: 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDV 206
+ ++ + + I L+ HK V + W + + S+G D I W+V
Sbjct: 237 TNIFIYSVKRPM------KIIKALNAHKDGVNNLLWET--PSTLVSSGADACIKRWNV 286
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 38.0 bits (87), Expect = 0.002
Identities = 15/161 (9%), Positives = 40/161 (24%), Gaps = 9/161 (5%)
Query: 97 HVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYI 156
V ++ G + A+ + ++ GA + I +
Sbjct: 198 AAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRK 257
Query: 157 PDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVID 216
D S + + +E + + G+ I
Sbjct: 258 ADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAEN------TSSVTASVGQTSGPIS 311
Query: 217 CHPDVINCLSFNRDGSRL--VTTCKDKTVRVLDPRTGLVIS 255
+ + + +DG+ + + + + D + S
Sbjct: 312 -NGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQS 351
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 494 | |||
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 100.0 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 100.0 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 100.0 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 100.0 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 100.0 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 100.0 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.97 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 99.97 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 99.97 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 99.96 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 99.96 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.96 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 99.96 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.96 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 99.95 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 99.95 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.95 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.95 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.94 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 99.94 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 99.92 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.9 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 99.89 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.89 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.89 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.88 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.85 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.85 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.83 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.82 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.81 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.8 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.78 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.76 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.75 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.74 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.7 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.68 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.68 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.64 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.58 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.56 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.49 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.39 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 99.28 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 99.27 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.23 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 99.13 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 99.07 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 99.01 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 98.99 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 98.97 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 98.88 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 98.84 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 98.83 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 98.8 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 98.78 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 98.78 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 98.69 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 98.6 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 98.54 | |
| d1npea_ | 263 | Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | 98.39 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 98.37 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 98.3 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 98.27 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 98.22 | |
| d1ijqa1 | 266 | Low density lipoprotein (LDL) receptor {Human (Hom | 98.18 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 98.16 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 98.15 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 98.12 | |
| d1fwxa2 | 459 | Nitrous oxide reductase, N-terminal domain {Paraco | 97.85 | |
| d1npea_ | 263 | Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | 97.56 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 97.1 | |
| d1ijqa1 | 266 | Low density lipoprotein (LDL) receptor {Human (Hom | 96.83 | |
| d1fwxa2 | 459 | Nitrous oxide reductase, N-terminal domain {Paraco | 96.46 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 96.44 | |
| d1h6la_ | 353 | Thermostable phytase (3-phytase) {Bacillus amyloli | 96.42 | |
| d1utca2 | 327 | Clathrin heavy-chain terminal domain {Rat (Rattus | 96.22 | |
| d1utca2 | 327 | Clathrin heavy-chain terminal domain {Rat (Rattus | 95.74 | |
| d1v04a_ | 340 | Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory | 95.37 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 95.05 | |
| d1kb0a2 | 573 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 94.21 | |
| d2ad6a1 | 571 | Methanol dehydrogenase, heavy chain {Methylophilus | 94.01 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 93.78 | |
| d1v04a_ | 340 | Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory | 93.64 | |
| d1qfma1 | 430 | Prolyl oligopeptidase, N-terminal domain {Pig (Sus | 93.52 | |
| d1flga_ | 582 | Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax | 92.32 | |
| d1flga_ | 582 | Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax | 92.16 | |
| d1kb0a2 | 573 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 91.75 | |
| d2ad6a1 | 571 | Methanol dehydrogenase, heavy chain {Methylophilus | 91.62 | |
| d1w6sa_ | 596 | Methanol dehydrogenase, heavy chain {Methylobacter | 91.03 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 90.93 | |
| d1xipa_ | 381 | Nucleoporin NUP159 {Baker's yeast (Saccharomyces c | 90.58 | |
| d1h6la_ | 353 | Thermostable phytase (3-phytase) {Bacillus amyloli | 88.66 | |
| d1crua_ | 450 | Soluble quinoprotein glucose dehydrogenase {Acinet | 88.37 | |
| d1crua_ | 450 | Soluble quinoprotein glucose dehydrogenase {Acinet | 86.47 | |
| d1w6sa_ | 596 | Methanol dehydrogenase, heavy chain {Methylobacter | 83.28 | |
| d2hu7a1 | 313 | Acylamino-acid-releasing enzyme, N-terminal donain | 81.59 |
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.6e-35 Score=277.77 Aligned_cols=216 Identities=16% Similarity=0.161 Sum_probs=183.9
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.|++||+..... .....+.+|...|.+++|+|++ .++++++.|+.|++||+.+++......+|...|.+++|+
T Consensus 119 g~i~iwd~~~~~~-----~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~l~~s 192 (337)
T d1gxra_ 119 STLSIWDLAAPTP-----RIKAELTSSAPACYALAISPDS-KVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS 192 (337)
T ss_dssp SEEEEEECCCC-------EEEEEEECSSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred ccccccccccccc-----cccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccc
Confidence 4799999876532 4456778899999999999998 799999999999999999999999999999999999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD 308 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~ 308 (494)
+++..+++++.|+.+++||+++++.+..+. |... +.+++|+|++. ++++| +.|+.|++||+++... .....
T Consensus 193 ~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~-~~~~-i~~l~~~~~~~-~l~~~---~~d~~i~i~d~~~~~~---~~~~~ 263 (337)
T d1gxra_ 193 NDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQ-IFSLGYCPTGE-WLAVG---MESSNVEVLHVNKPDK---YQLHL 263 (337)
T ss_dssp TTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSC-EEEEEECTTSS-EEEEE---ETTSCEEEEETTSSCE---EEECC
T ss_pred ccccccccccccccccccccccceeecccc-cccc-eEEEEEccccc-cccee---cccccccccccccccc---ccccc
Confidence 999999999999999999999999877664 5555 89999999854 45555 4899999999987543 33445
Q ss_pred CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEee
Q psy14130 309 SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLH 384 (494)
Q Consensus 309 ~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~ 384 (494)
+...|.+++|+|++++| ++|+.||.|++||+.+++.+.. ..+..+|.+++|+|++.+++++ |+.+++|++-
T Consensus 264 ~~~~i~~v~~s~~g~~l-~s~s~Dg~i~iwd~~~~~~~~~----~~~~~~v~~~~~s~d~~~l~t~s~D~~I~vWdl~ 336 (337)
T d1gxra_ 264 HESCVLSLKFAYCGKWF-VSTGKDNLLNAWRTPYGASIFQ----SKESSSVLSCDISVDDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp CSSCEEEEEECTTSSEE-EEEETTSEEEEEETTTCCEEEE----EECSSCEEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred cccccceEEECCCCCEE-EEEeCCCeEEEEECCCCCEEEE----ccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEEEE
Confidence 77889999999999988 8999999999999999987543 2346789999999999988774 8999999974
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.6e-34 Score=269.49 Aligned_cols=215 Identities=21% Similarity=0.319 Sum_probs=184.2
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcC
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNR 229 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~ 229 (494)
.+.+|+.... .....+.+|...+.++.|+|++ ..+++++.|+.+++||+++++.+..+.+|...+.+++|++
T Consensus 82 ~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (317)
T d1vyhc1 82 TIKLWDFQGF-------ECIRTMHGHDHNVSSVSIMPNG-DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ 153 (317)
T ss_dssp CCCEEETTSS-------CEEECCCCCSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECT
T ss_pred cccccccccc-------ccccccccccccceeeeccCCC-ceEEeeccCcceeEeecccceeeeEEccCCCcceeeeccc
Confidence 5788887766 5566778899999999999998 7999999999999999999999999999999999999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCC-------------------CeEEEEEecCCCCceE
Q psy14130 230 DGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDT-------------------GRIVTTGFSRHSDRQV 290 (494)
Q Consensus 230 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~l~~~g~~~~~d~~i 290 (494)
++.+|++++.|+.|++|++++++.+..+..|... +..+.+.++. +.++.+| +.|+.|
T Consensus 154 ~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~d~~i 229 (317)
T d1vyhc1 154 DGTLIASCSNDQTVRVWVVATKECKAELREHRHV-VECISWAPESSYSSISEATGSETKKSGKPGPFLLSG---SRDKTI 229 (317)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSC-EEEEEECCSCGGGGGGGCCSCC-------CCEEEEE---ETTSEE
T ss_pred CCCEEEEEeCCCeEEEEeeccceeeEEEecCCCC-ceEEEEeeccccceeeccccceeeeeccCCceeEec---cCCCEE
Confidence 9999999999999999999999999999888876 7777777653 2356666 689999
Q ss_pred EEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCce
Q psy14130 291 GLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGC 370 (494)
Q Consensus 291 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 370 (494)
++||+++......+ ..+...+.+++|+|++++| ++|+.||.|++||+++++++..+. . +..+|++++|+|++.+
T Consensus 230 ~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~-~--h~~~V~~~~~s~~~~~ 303 (317)
T d1vyhc1 230 KMWDVSTGMCLMTL--VGHDNWVRGVLFHSGGKFI-LSCADDKTLRVWDYKNKRCMKTLN-A--HEHFVTSLDFHKTAPY 303 (317)
T ss_dssp EEEETTTTEEEEEE--ECCSSCEEEEEECSSSSCE-EEEETTTEEEEECCTTSCCCEEEE-C--CSSCEEEEEECSSSSC
T ss_pred EEEECCCCcEEEEE--eCCCCCEEEEEECCCCCEE-EEEECCCeEEEEECCCCcEEEEEc-C--CCCCEEEEEEcCCCCE
Confidence 99999875533222 3466889999999999998 899999999999999998765543 2 3578999999999998
Q ss_pred eeec--cceeEEEE
Q psy14130 371 DVTQ--CEIFRFFK 382 (494)
Q Consensus 371 ~~~~--~~~~~~~~ 382 (494)
++++ |+.+++|+
T Consensus 304 l~s~s~Dg~i~iWd 317 (317)
T d1vyhc1 304 VVTGSVDQTVKVWE 317 (317)
T ss_dssp EEEEETTSEEEEEC
T ss_pred EEEEeCCCeEEEeC
Confidence 8875 89999996
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=3.8e-32 Score=262.12 Aligned_cols=220 Identities=20% Similarity=0.348 Sum_probs=174.6
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.|++|+...+ +.+..+.+|...|.+++|++++ ..+++++.++.+++||..+.........+...+..+.+.
T Consensus 143 g~v~i~~~~~~-------~~~~~~~~h~~~v~~~~~~~~~-~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 214 (388)
T d1erja_ 143 RLIRIWDIENR-------KIVMILQGHEQDIYSLDYFPSG-DKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSP 214 (388)
T ss_dssp SCEEEEETTTT-------EEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECS
T ss_pred ccccccccccc-------cccccccccccccccccccccc-ccccccccceeeeeeeccccccccccccccccccccccC
Confidence 47999999888 7778889999999999999998 799999999999999999998888777665555444444
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceEEEee-------ecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCc
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGLVISQGV-------CHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTP 301 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~ 301 (494)
+++++|++++.|+.|++||.+++..+..+. +|... +..+.|+|++. ++++| +.|+.|++||+++....
T Consensus 215 ~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~-v~~l~~s~~~~-~l~s~---~~d~~i~iwd~~~~~~~ 289 (388)
T d1erja_ 215 GDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDS-VYSVVFTRDGQ-SVVSG---SLDRSVKLWNLQNANNK 289 (388)
T ss_dssp TTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSC-EEEEEECTTSS-EEEEE---ETTSEEEEEEC------
T ss_pred CCCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCC-EEEEEECCCCC-EEEEE---ECCCcEEEEeccCCccc
Confidence 588999999999999999999988766553 46666 89999999855 55555 48999999998764332
Q ss_pred e----------eEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEE------e
Q psy14130 302 L----------ALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGF------M 365 (494)
Q Consensus 302 ~----------~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~------~ 365 (494)
. ......+...+.+++|+|++++| ++|+.||.|++||+++++++..+. . +..+|.++++ +
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~sg~~dg~i~vwd~~~~~~~~~l~-~--H~~~V~~~~~~~~~~~s 365 (388)
T d1erja_ 290 SDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYI-LSGSKDRGVLFWDKKSGNPLLMLQ-G--HRNSVISVAVANGSSLG 365 (388)
T ss_dssp ---------CEEEEEECCSSCEEEEEECGGGCEE-EEEETTSEEEEEETTTCCEEEEEE-C--CSSCEEEEEECSSCTTC
T ss_pred cccccccccceeeecccccceEEEEEECCCCCEE-EEEeCCCEEEEEECCCCcEEEEEe-C--CCCCEEEEEEecCcccC
Confidence 1 12233466789999999999998 899999999999999998865543 2 3567888875 6
Q ss_pred cCCceeeec--cceeEEEEeeC
Q psy14130 366 PKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 366 p~~~~~~~~--~~~~~~~~l~~ 385 (494)
|++.+++++ |+.+++|++..
T Consensus 366 pd~~~l~s~s~Dg~I~iW~~~k 387 (388)
T d1erja_ 366 PEYNVFATGSGDCKARIWKYKK 387 (388)
T ss_dssp TTCEEEEEEETTSEEEEEEEEE
T ss_pred CCCCEEEEEeCCCEEEEEeeee
Confidence 788888875 89999999864
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=2.8e-32 Score=255.22 Aligned_cols=223 Identities=13% Similarity=0.164 Sum_probs=180.3
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeC--CCeEEEEECCCCeEEEEecCCCCceEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGF--DYLIILWDVGKGEALTVIDCHPDVINCLS 226 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~--d~~v~iwd~~~~~~~~~~~~h~~~v~~l~ 226 (494)
++|+|||+.+... .....+.+|...|.+++|+|++ ++|++++. +..+++|++++++....+.+|.+.|++++
T Consensus 80 g~i~iwd~~~~~~-----~~~~~~~~~~~~v~~v~~s~d~-~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~h~~~v~~v~ 153 (311)
T d1nr0a1 80 GNVRIWDTTQTTH-----ILKTTIPVFSGPVKDISWDSES-KRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVD 153 (311)
T ss_dssp SEEEEEESSSTTC-----CEEEEEECSSSCEEEEEECTTS-CEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEE
T ss_pred ceEeeeeeecccc-----ccccccccccCccccccccccc-ccccccccccccccccccccccccccccccccccccccc
Confidence 3799999988743 2335678899999999999998 68888876 45699999999999999999999999999
Q ss_pred EcCCCC-EEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEe
Q psy14130 227 FNRDGS-RLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALE 305 (494)
Q Consensus 227 ~~~~~~-~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~ 305 (494)
|+|+++ .|++|+.|+.|++||+++++....+..|... +..+.|+|++. ++++| +.|+.|++||+++......+.
T Consensus 154 ~~~~~~~~l~sgs~d~~i~i~d~~~~~~~~~~~~~~~~-i~~v~~~p~~~-~l~~~---~~d~~v~~~d~~~~~~~~~~~ 228 (311)
T d1nr0a1 154 FKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKF-VHSVRYNPDGS-LFAST---GGDGTIVLYNGVDGTKTGVFE 228 (311)
T ss_dssp ECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSC-EEEEEECTTSS-EEEEE---ETTSCEEEEETTTCCEEEECB
T ss_pred ccccceeeeccccccccccccccccccccccccccccc-ccccccCcccc-ccccc---ccccccccccccccccccccc
Confidence 999988 4889999999999999999999999999887 99999999855 55555 489999999998754322221
Q ss_pred -----eecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccceeEE
Q psy14130 306 -----TVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRF 380 (494)
Q Consensus 306 -----~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~ 380 (494)
...|...|.+++|+|++++| ++|+.||.|++||+++++.+..+.........+.++.|+++..+.++.|+.+++
T Consensus 229 ~~~~~~~~h~~~V~~~~~s~~~~~l-~tgs~Dg~v~iwd~~t~~~~~~l~~~~~~~~~~~~~~~~~~~l~s~s~dG~i~~ 307 (311)
T d1nr0a1 229 DDSLKNVAHSGSVFGLTWSPDGTKI-ASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINF 307 (311)
T ss_dssp CTTSSSCSSSSCEEEEEECTTSSEE-EEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEE
T ss_pred ccccccccccccccccccCCCCCEE-EEEeCCCeEEEEECCCCcEEEEEECCCCccceEEEEEecCCEEEEEECCCEEEE
Confidence 12356789999999999998 889999999999999998755543332223456677777776555667999999
Q ss_pred EEe
Q psy14130 381 FKL 383 (494)
Q Consensus 381 ~~l 383 (494)
|++
T Consensus 308 wd~ 310 (311)
T d1nr0a1 308 VNP 310 (311)
T ss_dssp EET
T ss_pred EeC
Confidence 986
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=4.2e-31 Score=249.27 Aligned_cols=287 Identities=16% Similarity=0.212 Sum_probs=220.3
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 82 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~ 82 (494)
+||+++|++|+|+| ++++|||||.||+|+ +|+....+... .+
T Consensus 52 ~GH~~~I~~l~~s~-~~~~l~sgs~Dg~v~-iWd~~~~~~~~--~~---------------------------------- 93 (340)
T d1tbga_ 52 RGHLAKIYAMHWGT-DSRLLVSASQDGKLI-IWDSYTTNKVH--AI---------------------------------- 93 (340)
T ss_dssp CCCSSCEEEEEECT-TSSEEEEEETTTEEE-EEETTTTEEEE--EE----------------------------------
T ss_pred CCCCCCEEEEEECC-CCCEEEEEECCCcee-eeecccceeEE--EE----------------------------------
Confidence 69999999999999 899999999999999 88753222100 00
Q ss_pred eccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCC
Q psy14130 83 PIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLS 162 (494)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~ 162 (494)
+. ....+..+.++|....++..+ .++.+++|+.......
T Consensus 94 ~~--------------------------------~~~~v~~v~~~~~~~~l~~~~---------~d~~i~~~~~~~~~~~ 132 (340)
T d1tbga_ 94 PL--------------------------------RSSWVMTCAYAPSGNYVACGG---------LDNICSIYNLKTREGN 132 (340)
T ss_dssp EC--------------------------------SCSCEEEEEECTTSSEEEEEE---------TTCCEEEEESSSSCSC
T ss_pred ec--------------------------------ccccEEeeEeeccceeeeeec---------ccceeecccccccccc
Confidence 00 001111222322221122211 1236999998766432
Q ss_pred CCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCe
Q psy14130 163 GNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKT 242 (494)
Q Consensus 163 ~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~ 242 (494)
. .....+.+|............ ..++.+..|.....++............+...+....+.+.+.++++++.|+.
T Consensus 133 ~---~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 207 (340)
T d1tbga_ 133 V---RVSRELAGHTGYLSCCRFLDD--NQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDAS 207 (340)
T ss_dssp C---CEEEEECCCSSCEEEEEEEET--TEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTTE
T ss_pred c---ccceecccccccccccccccc--cccccccccccccccccccccccccccccceeEeeeccccccceeEEeecCce
Confidence 2 445677888888877777766 47888899999999999988888888888999999999999999999999999
Q ss_pred EEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCC
Q psy14130 243 VRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDT 322 (494)
Q Consensus 243 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 322 (494)
|++||+++++++..+.+|... +.+++|+|++ .++++| +.|+.|++||++............+...+.+++|+|++
T Consensus 208 v~i~d~~~~~~~~~~~~h~~~-i~~v~~~p~~-~~l~s~---s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~ 282 (340)
T d1tbga_ 208 AKLWDVREGMCRQTFTGHESD-INAICFFPNG-NAFATG---SDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSG 282 (340)
T ss_dssp EEEEETTTTEEEEEECCCSSC-EEEEEECTTS-SEEEEE---ETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECSSS
T ss_pred EEEEECCCCcEEEEEeCCCCC-eEEEEECCCC-CEEEEE---eCCCeEEEEeecccccccccccccccCceEEEEECCCC
Confidence 999999999999999999887 9999999985 455555 58999999999876544444344556779999999999
Q ss_pred CEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEE
Q psy14130 323 RILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFK 382 (494)
Q Consensus 323 ~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~ 382 (494)
++| ++|+.||.|++||+.+++.+..+. . |..+|++++|+|++.+++++ |+.+++|+
T Consensus 283 ~~l-~~g~~dg~i~iwd~~~~~~~~~~~-~--H~~~V~~l~~s~d~~~l~s~s~Dg~v~iWd 340 (340)
T d1tbga_ 283 RLL-LAGYDDFNCNVWDALKADRAGVLA-G--HDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp CEE-EEEETTSCEEEEETTTCCEEEEEC-C--CSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CEE-EEEECCCEEEEEECCCCcEEEEEc-C--CCCCEEEEEEeCCCCEEEEEccCCEEEEeC
Confidence 998 899999999999999998754443 2 35789999999999988874 89999995
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=3.3e-31 Score=246.20 Aligned_cols=286 Identities=12% Similarity=0.108 Sum_probs=196.7
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 82 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~ 82 (494)
+||.++|++|+|+| ++++|+||+.||+|+ +|+....+.. ..+. ..+
T Consensus 9 ~GH~~~V~~l~~s~-dg~~l~s~s~Dg~v~-vWd~~~~~~~--~~~~---~~h--------------------------- 54 (299)
T d1nr0a2 9 YGHNKAITALSSSA-DGKTLFSADAEGHIN-SWDISTGISN--RVFP---DVH--------------------------- 54 (299)
T ss_dssp CCCSSCEEEEEECT-TSSEEEEEETTSCEE-EEETTTCCEE--ECSS---CSC---------------------------
T ss_pred CCCCCCcEEEEECC-CCCEEEEEcCCCeEE-EEECCCCcEE--EEEc---CCC---------------------------
Confidence 79999999999999 899999999999999 8875332210 0000 000
Q ss_pred eccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCC
Q psy14130 83 PIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLS 162 (494)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~ 162 (494)
...+..+.++|+ +..+.+..++.+++|+.......
T Consensus 55 -----------------------------------~~~v~~v~~~~~----------g~~~~~~~d~~v~~~~~~~~~~~ 89 (299)
T d1nr0a2 55 -----------------------------------ATMITGIKTTSK----------GDLFTVSWDDHLKVVPAGGSGVD 89 (299)
T ss_dssp -----------------------------------SSCEEEEEECTT----------SCEEEEETTTEEEEECSSSSSSC
T ss_pred -----------------------------------CCcEEEEEeecc----------ceeecccceeeEEEeccCCcccc
Confidence 001111222221 11222223347999998765332
Q ss_pred CCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCe
Q psy14130 163 GNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKT 242 (494)
Q Consensus 163 ~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~ 242 (494)
........|...+.+++|+|++ .++++++ ++.+++|+.. +..... ....+.+++|+|++++|++++.|+.
T Consensus 90 ----~~~~~~~~~~~~~~~~~~s~~g-~~~~~~~-~~~i~~~~~~--~~~~~~--~~~~~~~~~~s~~~~~l~~g~~dg~ 159 (299)
T d1nr0a2 90 ----SSKAVANKLSSQPLGLAVSADG-DIAVAAC-YKHIAIYSHG--KLTEVP--ISYNSSCVALSNDKQFVAVGGQDSK 159 (299)
T ss_dssp ----TTSCCEEECSSCEEEEEECTTS-SCEEEEE-SSEEEEEETT--EEEEEE--CSSCEEEEEECTTSCEEEEEETTSE
T ss_pred ----cccccccccccccccccccccc-ccccccc-cccccccccc--cccccc--ccccccccccccccccccccccccc
Confidence 1122334577889999999998 5666555 5789999954 333332 3456789999999999999999999
Q ss_pred EEEEeCCCCceEE-EeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee-cCCCceEEeEEeC
Q psy14130 243 VRVLDPRTGLVIS-QGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV-DSSSGVLFPYYDH 320 (494)
Q Consensus 243 v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~v~~~~~~~ 320 (494)
|++||+++++... ....|... +..++|+|++.. +++| +.|+.|++||+.+.......... .|...|.+++|+|
T Consensus 160 i~~~d~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~-l~~~---~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~ 234 (299)
T d1nr0a2 160 VHVYKLSGASVSEVKTIVHPAE-ITSVAFSNNGAF-LVAT---DQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSP 234 (299)
T ss_dssp EEEEEEETTEEEEEEEEECSSC-EEEEEECTTSSE-EEEE---ETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECT
T ss_pred cccccccccccccccccccccc-cccccccccccc-cccc---ccccccccccccccccccccccccccccccccccccc
Confidence 9999999887543 34567766 899999998554 4555 48999999998765433222222 3567899999999
Q ss_pred CCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeee--ccceeEEEEee
Q psy14130 321 DTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVT--QCEIFRFFKLH 384 (494)
Q Consensus 321 ~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~--~~~~~~~~~l~ 384 (494)
++++| ++|+.||.|++||++++...........+...+..++|.+++ .+++ .|+.+|+|++.
T Consensus 235 ~~~~l-~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~s~D~~i~iWdl~ 298 (299)
T d1nr0a2 235 DNVRL-ATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNET-TIVSAGQDSNIKFWNVP 298 (299)
T ss_dssp TSSEE-EEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEETT-EEEEEETTSCEEEEECC
T ss_pred cccce-EEEcCCCEEEEEECCCCCcceEEEecCCCCCcEEEEEECCCC-EEEEEeCCCEEEEEecc
Confidence 99998 899999999999999876433333333334567777776554 4554 38999999974
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=5e-31 Score=253.23 Aligned_cols=212 Identities=11% Similarity=0.126 Sum_probs=169.0
Q ss_pred EecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeE--EEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEe
Q psy14130 170 MDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEA--LTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLD 247 (494)
Q Consensus 170 ~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~--~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd 247 (494)
..+.+|.+.|.+++|+|++ ++|++|+.|++|++||+.++.. ...+.+|...|++++|+|+++.|++++.|+++++|+
T Consensus 45 ~~l~gH~~~V~~l~fsp~~-~~l~s~s~D~~i~vWd~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~ 123 (371)
T d1k8kc_ 45 HELKEHNGQVTGVDWAPDS-NRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICY 123 (371)
T ss_dssp EEEECCSSCEEEEEEETTT-TEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEE
T ss_pred EEecCCCCCEEEEEECCCC-CEEEEEECCCeEEEEeecccccccccccccccccccccccccccccceeecccCcceeee
Confidence 3556799999999999998 7999999999999999987764 445678899999999999999999999999999999
Q ss_pred CCCCceE----EEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCC----------------ceeEeee
Q psy14130 248 PRTGLVI----SQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNT----------------PLALETV 307 (494)
Q Consensus 248 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~----------------~~~~~~~ 307 (494)
+...... .....|... +.++.|+|++ .++++| +.|+.|++||+..... .......
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~-v~~v~~~p~~-~~l~s~---s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (371)
T d1k8kc_ 124 FEQENDWWVCKHIKKPIRST-VLSLDWHPNS-VLLAAG---SCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS 198 (371)
T ss_dssp EETTTTEEEEEEECTTCCSC-EEEEEECTTS-SEEEEE---ETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC
T ss_pred eecccccccccccccccccc-cccccccccc-cceecc---ccCcEEEEEeeccCccccccccccccccccceeeeeecc
Confidence 8776532 333456665 8899999984 555666 5899999999764321 1112223
Q ss_pred cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec-cceeEEEEeeCC
Q psy14130 308 DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ-CEIFRFFKLHTT 386 (494)
Q Consensus 308 ~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~-~~~~~~~~l~~~ 386 (494)
.+...+.+++|+|+++.| ++++.|+.|++||+.+++.+..+.. +..+|.+++|+|++.+++++ |+.+++|.....
T Consensus 199 ~~~~~v~~~~~s~~g~~l-~s~~~d~~i~iwd~~~~~~~~~~~~---~~~~v~s~~fs~d~~~la~g~d~~~~~~~~~~~ 274 (371)
T d1k8kc_ 199 SSCGWVHGVCFSANGSRV-AWVSHDSTVCLADADKKMAVATLAS---ETLPLLAVTFITESSLVAAGHDCFPVLFTYDSA 274 (371)
T ss_dssp CCSSCEEEEEECSSSSEE-EEEETTTEEEEEEGGGTTEEEEEEC---SSCCEEEEEEEETTEEEEEETTSSCEEEEEETT
T ss_pred CccCcEEEEEeecccccc-cccccCCcceEEeeecccceeeeec---ccccceeeeecCCCCEEEEEcCCceEEEEeeCC
Confidence 456778999999999998 8899999999999999887554432 35789999999999998886 788889888764
Q ss_pred CCeEE
Q psy14130 387 RNMCE 391 (494)
Q Consensus 387 ~~~~~ 391 (494)
...+.
T Consensus 275 ~~~~~ 279 (371)
T d1k8kc_ 275 AGKLS 279 (371)
T ss_dssp TTEEE
T ss_pred CceEE
Confidence 44443
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=2.4e-31 Score=248.84 Aligned_cols=231 Identities=14% Similarity=0.132 Sum_probs=193.2
Q ss_pred CcEEEEEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeE--EEEecC
Q psy14130 140 GGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEA--LTVIDC 217 (494)
Q Consensus 140 ~g~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~--~~~~~~ 217 (494)
|..++....+.|.+|++.+. .....+.+|...|++++|+|+| ++||+|+.||+|++||+.+++. ...+.+
T Consensus 29 g~~l~~~~~~~v~i~~~~~~-------~~~~~~~~H~~~v~~~~~sp~g-~~latg~~dg~i~iwd~~~~~~~~~~~~~~ 100 (311)
T d1nr0a1 29 GDKIQYCNGTSVYTVPVGSL-------TDTEIYTEHSHQTTVAKTSPSG-YYCASGDVHGNVRIWDTTQTTHILKTTIPV 100 (311)
T ss_dssp SSEEEEEETTEEEEEETTCS-------SCCEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEESSSTTCCEEEEEEC
T ss_pred CCEEEEEeCCEEEEEECCCC-------ceeEEEcCCCCCEEEEEEeCCC-CeEeccccCceEeeeeeecccccccccccc
Confidence 33444445567999999887 5566788999999999999998 7999999999999999988753 456788
Q ss_pred CCCceEEEEEcCCCCEEEEEeC--CCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeC
Q psy14130 218 HPDVINCLSFNRDGSRLVTTCK--DKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDE 295 (494)
Q Consensus 218 h~~~v~~l~~~~~~~~l~s~~~--d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~ 295 (494)
|.+.|.+++|+|++++|++++. ++.+++||+.+++...++.+|... +..++|+|++..++++| +.|+.|++||+
T Consensus 101 ~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~h~~~-v~~v~~~~~~~~~l~sg---s~d~~i~i~d~ 176 (311)
T d1nr0a1 101 FSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARA-MNSVDFKPSRPFRIISG---SDDNTVAIFEG 176 (311)
T ss_dssp SSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSC-EEEEEECSSSSCEEEEE---ETTSCEEEEET
T ss_pred ccCccccccccccccccccccccccccccccccccccccccccccccc-cccccccccceeeeccc---ccccccccccc
Confidence 9999999999999999999986 466999999999999999999887 89999999977778888 68999999999
Q ss_pred CCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEeccc----ccCCCCeeEEEEecCCcee
Q psy14130 296 NDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQ----SLSGAPQRGLGFMPKRGCD 371 (494)
Q Consensus 296 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~----~~~~~~v~~~~~~p~~~~~ 371 (494)
++...... ...+...|.++.|+|+++++ ++|+.|+.|++||+.+++....+... ..+..+|.+++|+|++.++
T Consensus 177 ~~~~~~~~--~~~~~~~i~~v~~~p~~~~l-~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l 253 (311)
T d1nr0a1 177 PPFKFKST--FGEHTKFVHSVRYNPDGSLF-ASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKI 253 (311)
T ss_dssp TTBEEEEE--ECCCSSCEEEEEECTTSSEE-EEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEE
T ss_pred cccccccc--cccccccccccccCcccccc-ccccccccccccccccccccccccccccccccccccccccccCCCCCEE
Confidence 87543222 23466889999999999998 88999999999999988765443221 1245789999999999988
Q ss_pred eec--cceeEEEEeeC
Q psy14130 372 VTQ--CEIFRFFKLHT 385 (494)
Q Consensus 372 ~~~--~~~~~~~~l~~ 385 (494)
+++ |+.+++|++.+
T Consensus 254 ~tgs~Dg~v~iwd~~t 269 (311)
T d1nr0a1 254 ASASADKTIKIWNVAT 269 (311)
T ss_dssp EEEETTSEEEEEETTT
T ss_pred EEEeCCCeEEEEECCC
Confidence 885 89999999887
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-30 Score=244.91 Aligned_cols=174 Identities=20% Similarity=0.263 Sum_probs=151.2
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.|++|++.++ +......+|...|.+++|++++ ..+++|+.|+.|++||+++++.+..+. |.+.|.+++|+
T Consensus 163 ~~i~~~~~~~~-------~~~~~~~~~~~~v~~l~~s~~~-~~~~~~~~d~~v~i~d~~~~~~~~~~~-~~~~i~~l~~~ 233 (337)
T d1gxra_ 163 GNIAVWDLHNQ-------TLVRQFQGHTDGASCIDISNDG-TKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYC 233 (337)
T ss_dssp SCEEEEETTTT-------EEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEEC
T ss_pred ccccccccccc-------cccccccccccccccccccccc-cccccccccccccccccccceeecccc-cccceEEEEEc
Confidence 36999999987 6677788899999999999998 799999999999999999999888776 88999999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD 308 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~ 308 (494)
|++++|++++.|+.+++||+++++.. ....|... +..+.|+|++..++ +| +.|+.|++||+.+.... ....
T Consensus 234 ~~~~~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~-i~~v~~s~~g~~l~-s~---s~Dg~i~iwd~~~~~~~---~~~~ 304 (337)
T d1gxra_ 234 PTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESC-VLSLKFAYCGKWFV-ST---GKDNLLNAWRTPYGASI---FQSK 304 (337)
T ss_dssp TTSSEEEEEETTSCEEEEETTSSCEE-EECCCSSC-EEEEEECTTSSEEE-EE---ETTSEEEEEETTTCCEE---EEEE
T ss_pred ccccccceeccccccccccccccccc-cccccccc-cceEEECCCCCEEE-EE---eCCCeEEEEECCCCCEE---EEcc
Confidence 99999999999999999999988865 45567776 89999999865554 45 48999999999876543 3345
Q ss_pred CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEee
Q psy14130 309 SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELT 341 (494)
Q Consensus 309 ~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~ 341 (494)
+...|.+++|+|++++| ++|+.||.|++||+.
T Consensus 305 ~~~~v~~~~~s~d~~~l-~t~s~D~~I~vWdl~ 336 (337)
T d1gxra_ 305 ESSSVLSCDISVDDKYI-VTGSGDKKATVYEVI 336 (337)
T ss_dssp CSSCEEEEEECTTSCEE-EEEETTSCEEEEEEE
T ss_pred CCCCEEEEEEeCCCCEE-EEEeCCCeEEEEEEE
Confidence 77899999999999998 899999999999973
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=9.7e-29 Score=232.60 Aligned_cols=178 Identities=14% Similarity=0.164 Sum_probs=139.4
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEe---cCCCCceEEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVI---DCHPDVINCLS 226 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~---~~h~~~v~~l~ 226 (494)
.+++|+..++ ..+..+.+|...|.+++|+|++..++++++.|+.+++||....+....+ ..|...|++++
T Consensus 140 ~~~~~~~~~~-------~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~ 212 (325)
T d1pgua1 140 FGVFISWDSG-------NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVE 212 (325)
T ss_dssp SEEEEETTTC-------CEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEE
T ss_pred eEEEEeeccc-------ccceeeeecccccccccccccccceEEEeecccccccccccccccceecccccCCCCccEEee
Confidence 5899999887 6778889999999999999998767899999999999999888766654 35778899999
Q ss_pred EcCC-CCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEE---CCCCeEEEEEecCCCCceEEEEeCCCCCCce
Q psy14130 227 FNRD-GSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFI---GDTGRIVTTGFSRHSDRQVGLWDENDLNTPL 302 (494)
Q Consensus 227 ~~~~-~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~ 302 (494)
|+|+ +.+|++++.|+.|++||+++++.+..+.+|... +..+.|+ +++..+ ++| +.|+.|+|||+++.+...
T Consensus 213 ~~pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~~~~~-v~~~~~s~~~~dg~~l-~s~---s~D~~i~iwd~~~~~~~~ 287 (325)
T d1pgua1 213 FSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEP-VQGGIFALSWLDSQKF-ATV---GADATIRVWDVTTSKCVQ 287 (325)
T ss_dssp ECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBC-CCSCEEEEEESSSSEE-EEE---ETTSEEEEEETTTTEEEE
T ss_pred eccccceeccccccccceeeeeeccccccccccccccc-cccceeeeeccCCCEE-EEE---eCCCeEEEEECCCCCEEE
Confidence 9996 689999999999999999999999999988876 5544444 664444 555 489999999998765433
Q ss_pred eEeeecCCCceEEeEEeCCC-CEEEEEEeCCCcEEEEEe
Q psy14130 303 ALETVDSSSGVLFPYYDHDT-RILFLAGKGDGNIRYYEL 340 (494)
Q Consensus 303 ~~~~~~~~~~v~~~~~~~~~-~~l~~~g~~dg~i~~wd~ 340 (494)
......+...+..+++.+.+ ..| ++|+.||.|++||+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~l-~s~s~dg~i~vwdl 325 (325)
T d1pgua1 288 KWTLDKQQLGNQQVGVVATGNGRI-ISLSLDGTLNFYEL 325 (325)
T ss_dssp EEECCTTCGGGCEEEEEEEETTEE-EEEETTSCEEEEET
T ss_pred EEEecCCcccCeEEEEEECCCCEE-EEEECCCEEEEEEC
Confidence 33322333334444444433 355 89999999999995
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=3.3e-28 Score=230.14 Aligned_cols=218 Identities=17% Similarity=0.296 Sum_probs=160.8
Q ss_pred CcEEEEEcCCCCCCCCc----------------ccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEE
Q psy14130 149 HRVKLWYIPDGGLSGNL----------------NEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEAL 212 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~----------------~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~ 212 (494)
+.|++|++.+....... .........|...+.+. .+++ ++++++..|+.|++||+.+++.+
T Consensus 118 ~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~-~~~~~~~~d~~i~~~d~~~~~~~ 194 (355)
T d1nexb2 118 NTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHG-NIVVSGSYDNTLIVWDVAQMKCL 194 (355)
T ss_dssp SEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECCSSCEEEE--EEET-TEEEEEETTSCEEEEETTTTEEE
T ss_pred CcEEEEEccCCceeccccccceeccceeccccccceeeeeeecccccccc--cccc-ceeeeecccceeeeeecccccce
Confidence 47999999876432111 01122333455555544 4445 68999999999999999999999
Q ss_pred EEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEE
Q psy14130 213 TVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGL 292 (494)
Q Consensus 213 ~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~i 292 (494)
....++...+.++.|++++.++++++.|+.|++||++++..+..+.+|... +..+.+++ .++++| +.||.|++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~-v~~~~~~~---~~l~~~---~~dg~i~i 267 (355)
T d1nexb2 195 YILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTAL-VGLLRLSD---KFLVSA---AADGSIRG 267 (355)
T ss_dssp EEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCCEEEEECCCSSC-CCEEEECS---SEEEEE---CTTSEEEE
T ss_pred eeeeccccccccccccccceeeecccccceEEeeecccccccccccccccc-cccccccc---ceeeee---eccccccc
Confidence 999999999999999999999999999999999999999999999999887 88888754 466677 69999999
Q ss_pred EeCCCCCCceeEeeecCCCceEEe-EEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCcee
Q psy14130 293 WDENDLNTPLALETVDSSSGVLFP-YYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCD 371 (494)
Q Consensus 293 wd~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~ 371 (494)
||+++....... +...+..+ .+++++.++ ++| .||.|++||+++++.+...+. .+..+|.+++|+|+..++
T Consensus 268 wd~~~~~~~~~~----~~~~~~~~~~~~~~~~~l-~~g-~d~~i~vwd~~tg~~~~~~~~--~~~~~V~~v~~~~~~~~~ 339 (355)
T d1nexb2 268 WDANDYSRKFSY----HHTNLSAITTFYVSDNIL-VSG-SENQFNIYNLRSGKLVHANIL--KDADQIWSVNFKGKTLVA 339 (355)
T ss_dssp EETTTCCEEEEE----ECTTCCCCCEEEECSSEE-EEE-ETTEEEEEETTTCCBCCSCTT--TTCSEEEEEEEETTEEEE
T ss_pred ccccccceeccc----ccCCceEEEEEcCCCCEE-EEE-eCCEEEEEECCCCCEEEEEec--CCCCCEEEEEEcCCeEEE
Confidence 999875433222 33344443 556666655 555 599999999999987533332 245789999999986443
Q ss_pred ee-ccceeEEEEee
Q psy14130 372 VT-QCEIFRFFKLH 384 (494)
Q Consensus 372 ~~-~~~~~~~~~l~ 384 (494)
+. .|+.+.+|.++
T Consensus 340 ~~s~dg~~~l~~~d 353 (355)
T d1nexb2 340 AVEKDGQSFLEILD 353 (355)
T ss_dssp EEESSSCEEEEEEE
T ss_pred EEECCCcEEEEEEe
Confidence 33 38888887764
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=2.7e-27 Score=222.63 Aligned_cols=216 Identities=19% Similarity=0.333 Sum_probs=161.9
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEE
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSF 227 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~ 227 (494)
...+.+|+..++ .....+..+...... +.+.. ..+++++.|+.|++||+...+.+..+.+|...+..+.+
T Consensus 116 d~~i~~~~~~~~-------~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 185 (342)
T d2ovrb2 116 DATLRVWDIETG-------QCLHVLMGHVAAVRC--VQYDG-RRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF 185 (342)
T ss_dssp TSEEEEEESSSC-------CEEEEEECCSSCEEE--EEECS-SCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE
T ss_pred ceeEEEeecccc-------cceeeeeccccccee--ecccc-ceeeeecCCCeEEEeecccceeeEEEcCcccccccccC
Confidence 346999999887 333444434433333 33333 57889999999999999999999999999887776655
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee
Q psy14130 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV 307 (494)
Q Consensus 228 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~ 307 (494)
++.+|++++.|+.|++||++.++.+..+.+|... +..+.+.++ ++++| +.|+.|++||+............
T Consensus 186 --~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~-v~~~~~~~~---~l~s~---s~d~~i~iwd~~~~~~~~~~~~~ 256 (342)
T d2ovrb2 186 --DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSL-TSGMELKDN---ILVSG---NADSTVKIWDIKTGQCLQTLQGP 256 (342)
T ss_dssp --CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSC-EEEEEEETT---EEEEE---ETTSCEEEEETTTCCEEEEECST
T ss_pred --CCCEEEEEeCCCeEEEeecccceeeeEecccccc-eeEEecCCC---EEEEE---cCCCEEEEEeccccccccccccc
Confidence 6889999999999999999999999999999876 777766543 55666 58999999999876543333221
Q ss_pred -cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecc--cccCCCCeeEEEEecCCceeeec--cc----ee
Q psy14130 308 -DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLN--QSLSGAPQRGLGFMPKRGCDVTQ--CE----IF 378 (494)
Q Consensus 308 -~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~--~~~~~~~v~~~~~~p~~~~~~~~--~~----~~ 378 (494)
.+...+.++.++ ++++ ++|+.||.|++||+++++.+..+.. ...+...|++++|+|++.+++++ |+ .+
T Consensus 257 ~~~~~~~~~~~~~--~~~~-~s~s~Dg~i~iwd~~tg~~i~~~~~~~~~~~~~~v~~v~~s~~~~~la~g~~dGt~~~~l 333 (342)
T d2ovrb2 257 NKHQSAVTCLQFN--KNFV-ITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKL 333 (342)
T ss_dssp TSCSSCEEEEEEC--SSEE-EEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEE
T ss_pred ceeeeceeecccC--CCee-EEEcCCCEEEEEECCCCCEEEEEecccCCCCCCCEEEEEECCCCCEEEEEeCCCCCeeEE
Confidence 233455555554 5566 8999999999999999987655532 22345789999999999988875 44 37
Q ss_pred EEEEeeC
Q psy14130 379 RFFKLHT 385 (494)
Q Consensus 379 ~~~~l~~ 385 (494)
++|+++.
T Consensus 334 ~~~Df~~ 340 (342)
T d2ovrb2 334 LVLDFDV 340 (342)
T ss_dssp EEEECCC
T ss_pred EEEeCCC
Confidence 8888765
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.96 E-value=8.5e-28 Score=230.46 Aligned_cols=255 Identities=16% Similarity=0.191 Sum_probs=182.5
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 82 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~ 82 (494)
+||.++|++|+|+| ++++|+|||.|++|+ +|+...........
T Consensus 48 ~gH~~~V~~l~fsp-~~~~l~s~s~D~~i~-vWd~~~~~~~~~~~----------------------------------- 90 (371)
T d1k8kc_ 48 KEHNGQVTGVDWAP-DSNRIVTCGTDRNAY-VWTLKGRTWKPTLV----------------------------------- 90 (371)
T ss_dssp ECCSSCEEEEEEET-TTTEEEEEETTSCEE-EEEEETTEEEEEEE-----------------------------------
T ss_pred cCCCCCEEEEEECC-CCCEEEEEECCCeEE-EEeecccccccccc-----------------------------------
Confidence 68999999999999 899999999999999 88764332110000
Q ss_pred eccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCC
Q psy14130 83 PIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLS 162 (494)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~ 162 (494)
..........+.++|+...++... . .+.|++|++......
T Consensus 91 -------------------------------~~~~~~~v~~i~~~p~~~~l~~~s-~--------d~~i~i~~~~~~~~~ 130 (371)
T d1k8kc_ 91 -------------------------------ILRINRAARCVRWAPNEKKFAVGS-G--------SRVISICYFEQENDW 130 (371)
T ss_dssp -------------------------------CCCCSSCEEEEEECTTSSEEEEEE-T--------TSSEEEEEEETTTTE
T ss_pred -------------------------------cccccccccccccccccccceeec-c--------cCcceeeeeeccccc
Confidence 000001122223333221122211 2 247999998766321
Q ss_pred CCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC------------------eEEEEecCCCCceEE
Q psy14130 163 GNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKG------------------EALTVIDCHPDVINC 224 (494)
Q Consensus 163 ~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~------------------~~~~~~~~h~~~v~~ 224 (494)
........+|...|.+++|+|++ .+|++|+.|++|++||+... +.+....+|...|.+
T Consensus 131 ---~~~~~~~~~~~~~v~~v~~~p~~-~~l~s~s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 206 (371)
T d1k8kc_ 131 ---WVCKHIKKPIRSTVLSLDWHPNS-VLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHG 206 (371)
T ss_dssp ---EEEEEECTTCCSCEEEEEECTTS-SEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEE
T ss_pred ---ccccccccccccccccccccccc-cceeccccCcEEEEEeeccCccccccccccccccccceeeeeeccCccCcEEE
Confidence 12234567799999999999998 79999999999999998542 355667789999999
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeE
Q psy14130 225 LSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLAL 304 (494)
Q Consensus 225 l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~ 304 (494)
++|+|+|++|++++.|+.|++||+++++.+..+..|... +.+++|+++ +.++++| .|+.+++|+..........
T Consensus 207 ~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~-v~s~~fs~d-~~~la~g----~d~~~~~~~~~~~~~~~~~ 280 (371)
T d1k8kc_ 207 VCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLP-LLAVTFITE-SSLVAAG----HDCFPVLFTYDSAAGKLSF 280 (371)
T ss_dssp EEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCC-EEEEEEEET-TEEEEEE----TTSSCEEEEEETTTTEEEE
T ss_pred EEeecccccccccccCCcceEEeeecccceeeeeccccc-ceeeeecCC-CCEEEEE----cCCceEEEEeeCCCceEEE
Confidence 999999999999999999999999999999999999887 899999998 6888888 5777776653321110000
Q ss_pred ---------------------------------------eeecCCCceEEeEEeCCCC---EEEEEEeCCCcEEEEEeeC
Q psy14130 305 ---------------------------------------ETVDSSSGVLFPYYDHDTR---ILFLAGKGDGNIRYYELTN 342 (494)
Q Consensus 305 ---------------------------------------~~~~~~~~v~~~~~~~~~~---~l~~~g~~dg~i~~wd~~~ 342 (494)
....|.+.|.++++.+.+. ..++|++.||.|++||+++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~I~~i~~~~~~~~~~~~~~T~g~Dg~v~iW~~~~ 360 (371)
T d1k8kc_ 281 GGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRS 360 (371)
T ss_dssp CCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHH
T ss_pred eeeecCccccccccccceeeEecccceeEEeccccccceecccccCCEEEEEEeCCCCcceEEEEEEcCCCeEEEEeCCc
Confidence 0001556788888877543 2348999999999999976
Q ss_pred CC
Q psy14130 343 ER 344 (494)
Q Consensus 343 ~~ 344 (494)
.+
T Consensus 361 ~~ 362 (371)
T d1k8kc_ 361 LE 362 (371)
T ss_dssp HH
T ss_pred Ch
Confidence 43
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.96 E-value=3.5e-27 Score=219.18 Aligned_cols=175 Identities=20% Similarity=0.381 Sum_probs=154.8
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.+++||+.++ .....+.+|...+.+++|+|++ .+|++++.|+.|++|++.+++.+..+.+|...+.+++|+
T Consensus 123 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 194 (317)
T d1vyhc1 123 KTIKMWEVQTG-------YCVKTFTGHREWVRMVRPNQDG-TLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWA 194 (317)
T ss_dssp SEEEEEETTTC-------CEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEC
T ss_pred cceeEeecccc-------eeeeEEccCCCcceeeecccCC-CEEEEEeCCCeEEEEeeccceeeEEEecCCCCceEEEEe
Confidence 46999999988 6777889999999999999998 799999999999999999999999999999999999998
Q ss_pred CCC--------------------CEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCc
Q psy14130 229 RDG--------------------SRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDR 288 (494)
Q Consensus 229 ~~~--------------------~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~ 288 (494)
|++ ..+++++.|+.|++||+++++++.++.+|... +..++++|++..+++++ .||
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~s~~----~dg 269 (317)
T d1vyhc1 195 PESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCA----DDK 269 (317)
T ss_dssp CSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSC-EEEEEECSSSSCEEEEE----TTT
T ss_pred eccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCCCcEEEEEeCCCCC-EEEEEECCCCCEEEEEE----CCC
Confidence 753 47899999999999999999999999999887 89999999855555544 899
Q ss_pred eEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEE
Q psy14130 289 QVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYE 339 (494)
Q Consensus 289 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd 339 (494)
.|++||+++.+....+. .|...|.+++|+|++++| ++|+.||+|++||
T Consensus 270 ~i~iwd~~~~~~~~~~~--~h~~~V~~~~~s~~~~~l-~s~s~Dg~i~iWd 317 (317)
T d1vyhc1 270 TLRVWDYKNKRCMKTLN--AHEHFVTSLDFHKTAPYV-VTGSVDQTVKVWE 317 (317)
T ss_dssp EEEEECCTTSCCCEEEE--CCSSCEEEEEECSSSSCE-EEEETTSEEEEEC
T ss_pred eEEEEECCCCcEEEEEc--CCCCCEEEEEEcCCCCEE-EEEeCCCeEEEeC
Confidence 99999999866544332 366889999999999998 8999999999997
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.96 E-value=3.4e-27 Score=221.91 Aligned_cols=226 Identities=15% Similarity=0.151 Sum_probs=167.5
Q ss_pred CcEEEEEcCCCCCCCCccc-ceEecccccccEEEEEEcCCCCCEEEEEeC--CCeEEEEECCCCeEEEEecCCCCceEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNE-WIMDLHGHKRRVGYIEWHPTAENVVASAGF--DYLIILWDVGKGEALTVIDCHPDVINCL 225 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~-~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~--d~~v~iwd~~~~~~~~~~~~h~~~v~~l 225 (494)
++|+|||+..+.....+.. ....+..|.++|.+++|++++ ..|++++. ++.+++|+..+++.+..+.+|...|.++
T Consensus 87 g~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 165 (325)
T d1pgua1 87 GKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEG-RRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINAC 165 (325)
T ss_dssp SEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTS-SEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEE
T ss_pred CCEEEeeecCCcceeeeecccccccccccCcEEEEEECCCC-CccceeeccccceEEEEeecccccceeeeecccccccc
Confidence 4799999987644322211 123456788999999999998 57766654 6789999999999999999999999999
Q ss_pred EEcCCCCE-EEEEeCCCeEEEEeCCCCceEEEee---ecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCc
Q psy14130 226 SFNRDGSR-LVTTCKDKTVRVLDPRTGLVISQGV---CHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTP 301 (494)
Q Consensus 226 ~~~~~~~~-l~s~~~d~~v~iwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~ 301 (494)
+|+|++.. +++++.|+.+++||...++...... .|... +.+++|+|+.+.++++| +.|+.|++||+++....
T Consensus 166 ~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~-v~~v~~~pd~~~~l~s~---~~d~~i~iwd~~~~~~~ 241 (325)
T d1pgua1 166 HLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSF-VRDVEFSPDSGEFVITV---GSDRKISCFDGKSGEFL 241 (325)
T ss_dssp EECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCC-EEEEEECSTTCCEEEEE---ETTCCEEEEETTTCCEE
T ss_pred cccccccceEEEeecccccccccccccccceecccccCCCCc-cEEeeeccccceecccc---ccccceeeeeecccccc
Confidence 99998764 7789999999999999888666554 34444 88999999877888877 68999999999876543
Q ss_pred eeEeeecCCCceEEeEEe---CCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCee--EEEEecCCceeee-cc
Q psy14130 302 LALETVDSSSGVLFPYYD---HDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQR--GLGFMPKRGCDVT-QC 375 (494)
Q Consensus 302 ~~~~~~~~~~~v~~~~~~---~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~--~~~~~p~~~~~~~-~~ 375 (494)
..+. .+...+..+.|+ |++++| ++++.|+.|++||+++++++..+.. +.+...+. ++.+.+++.++.. .|
T Consensus 242 ~~l~--~~~~~v~~~~~s~~~~dg~~l-~s~s~D~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~s~s~d 317 (325)
T d1pgua1 242 KYIE--DDQEPVQGGIFALSWLDSQKF-ATVGADATIRVWDVTTSKCVQKWTL-DKQQLGNQQVGVVATGNGRIISLSLD 317 (325)
T ss_dssp EECC--BTTBCCCSCEEEEEESSSSEE-EEEETTSEEEEEETTTTEEEEEEEC-CTTCGGGCEEEEEEEETTEEEEEETT
T ss_pred cccc--ccccccccceeeeeccCCCEE-EEEeCCCeEEEEECCCCCEEEEEEe-cCCcccCeEEEEEECCCCEEEEEECC
Confidence 2222 244445444444 788888 8999999999999999987655432 22232333 4455555544332 38
Q ss_pred ceeEEEEe
Q psy14130 376 EIFRFFKL 383 (494)
Q Consensus 376 ~~~~~~~l 383 (494)
+.+++|+|
T Consensus 318 g~i~vwdl 325 (325)
T d1pgua1 318 GTLNFYEL 325 (325)
T ss_dssp SCEEEEET
T ss_pred CEEEEEEC
Confidence 99999985
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.96 E-value=1.9e-26 Score=216.98 Aligned_cols=174 Identities=21% Similarity=0.306 Sum_probs=145.1
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcC
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNR 229 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~ 229 (494)
....+..... ........+...+....+.+.+ .++++|+.|+.|++||+++++++.++.+|...|++++|+|
T Consensus 165 ~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~v~i~d~~~~~~~~~~~~h~~~i~~v~~~p 236 (340)
T d1tbga_ 165 TCALWDIETG-------QQTTTFTGHTGDVMSLSLAPDT-RLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFP 236 (340)
T ss_dssp EEEEEETTTT-------EEEEEEECCSSCEEEEEECTTS-SEEEEEETTTEEEEEETTTTEEEEEECCCSSCEEEEEECT
T ss_pred cccccccccc-------cccccccccceeEeeecccccc-ceeEEeecCceEEEEECCCCcEEEEEeCCCCCeEEEEECC
Confidence 4566666554 4445556678889999999997 7999999999999999999999999999999999999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceEEEee--ecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee
Q psy14130 230 DGSRLVTTCKDKTVRVLDPRTGLVISQGV--CHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV 307 (494)
Q Consensus 230 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~ 307 (494)
++++|++|+.|+.|++||++....+..+. .+... +..+.|++++ .++++| +.||.|++||+.+......+ .
T Consensus 237 ~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~~~-i~~~~~s~~~-~~l~~g---~~dg~i~iwd~~~~~~~~~~--~ 309 (340)
T d1tbga_ 237 NGNAFATGSDDATCRLFDLRADQELMTYSHDNIICG-ITSVSFSKSG-RLLLAG---YDDFNCNVWDALKADRAGVL--A 309 (340)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSC-EEEEEECSSS-CEEEEE---ETTSCEEEEETTTCCEEEEE--C
T ss_pred CCCEEEEEeCCCeEEEEeecccccccccccccccCc-eEEEEECCCC-CEEEEE---ECCCEEEEEECCCCcEEEEE--c
Confidence 99999999999999999999988776653 33333 7889999984 555566 58999999999876543322 2
Q ss_pred cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEE
Q psy14130 308 DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYE 339 (494)
Q Consensus 308 ~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd 339 (494)
.|...|.+++|+|++++| ++|+.||.|++||
T Consensus 310 ~H~~~V~~l~~s~d~~~l-~s~s~Dg~v~iWd 340 (340)
T d1tbga_ 310 GHDNRVSCLGVTDDGMAV-ATGSWDSFLKIWN 340 (340)
T ss_dssp CCSSCEEEEEECTTSSCE-EEEETTSCEEEEC
T ss_pred CCCCCEEEEEEeCCCCEE-EEEccCCEEEEeC
Confidence 466889999999999998 8999999999997
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.96 E-value=2.2e-26 Score=222.29 Aligned_cols=218 Identities=10% Similarity=0.120 Sum_probs=151.7
Q ss_pred CcEEEEEcCCCCCCCCcccc---eEecccccccEEEEEEcCCCC----CEEEEEeCCCeEEEEECCCCe-----------
Q psy14130 149 HRVKLWYIPDGGLSGNLNEW---IMDLHGHKRRVGYIEWHPTAE----NVVASAGFDYLIILWDVGKGE----------- 210 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~---~~~~~~h~~~V~~~~~~p~~~----~~l~s~s~d~~v~iwd~~~~~----------- 210 (494)
+.|++|++............ ......+...+..++|.+++. .++++++.||++++||+....
T Consensus 89 g~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~~~ 168 (393)
T d1sq9a_ 89 GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWS 168 (393)
T ss_dssp SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCC
T ss_pred CcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccceeeeeec
Confidence 37999998765432211110 111233566788888877642 578999999999999974211
Q ss_pred ----E---EEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEe------eecCCCCceEEEEECCCCeE
Q psy14130 211 ----A---LTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQG------VCHPGTRSSKAVFIGDTGRI 277 (494)
Q Consensus 211 ----~---~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l 277 (494)
. ......+...+.+++|+|++ +|++|+.|++|++||+++++.+..+ .+|... +.+++|+|++ .+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~-V~~l~~spdg-~~ 245 (393)
T d1sq9a_ 169 PTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNS-IRSVKFSPQG-SL 245 (393)
T ss_dssp CEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCC-EEEEEECSST-TE
T ss_pred cceecccceecccCCCCcEEEEEECCCC-EEEEEeCCCcEEEEeecccccccccccccccccccce-EEEccccccc-ce
Confidence 0 11122456678999999998 8999999999999999999876654 457776 9999999985 55
Q ss_pred EEEEecCCCCc---eEEEEeCCCCCCceeEe-----------eecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCC
Q psy14130 278 VTTGFSRHSDR---QVGLWDENDLNTPLALE-----------TVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNE 343 (494)
Q Consensus 278 ~~~g~~~~~d~---~i~iwd~~~~~~~~~~~-----------~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~ 343 (494)
|++| +.|+ .|++||+++......+. ...|...|.+++|+|++++| ++|+.|++|++||++++
T Consensus 246 l~sg---s~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l-~S~s~D~~v~vWd~~~g 321 (393)
T d1sq9a_ 246 LAIA---HDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETL-CSAGWDGKLRFWDVKTK 321 (393)
T ss_dssp EEEE---EEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEE-EEEETTSEEEEEETTTT
T ss_pred eeee---cCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCee-EEECCCCEEEEEECCCC
Confidence 5555 3564 69999998755432221 12467889999999999998 99999999999999999
Q ss_pred CceEEecccccC--CCCeeEEEEecCCceeeec
Q psy14130 344 RPYIHFLNQSLS--GAPQRGLGFMPKRGCDVTQ 374 (494)
Q Consensus 344 ~~~~~~~~~~~~--~~~v~~~~~~p~~~~~~~~ 374 (494)
+++..+. .|.. ......++|+|++..++++
T Consensus 322 ~~~~~l~-gH~~~v~~~~~~~~~~~~~~~~~~~ 353 (393)
T d1sq9a_ 322 ERITTLN-MHCDDIEIEEDILAVDEHGDSLAEP 353 (393)
T ss_dssp EEEEEEE-CCGGGCSSGGGCCCBCTTSCBCSSC
T ss_pred CEEEEEC-CcCCcccCCccEEEECCCCCEEEEc
Confidence 8765543 2211 1122356777777665543
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.95 E-value=1.2e-25 Score=216.02 Aligned_cols=231 Identities=18% Similarity=0.272 Sum_probs=178.8
Q ss_pred cCcEEEEEcCCCCCCCCccc-----------ceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEec
Q psy14130 148 IHRVKLWYIPDGGLSGNLNE-----------WIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVID 216 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~-----------~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~ 216 (494)
++.|+|||+.++.....+.. ......+|...|++++|+|++ ++|++|+.||.|++||...++.+..+.
T Consensus 82 d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~-~~l~s~~~dg~v~i~~~~~~~~~~~~~ 160 (388)
T d1erja_ 82 NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDG-KFLATGAEDRLIRIWDIENRKIVMILQ 160 (388)
T ss_dssp BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred CCeEEEEEecccceEeeecccccccccccccccccccCCCCCEEEEEECCCC-Ccceecccccccccccccccccccccc
Confidence 34799999988754322110 112334678889999999998 799999999999999999999999999
Q ss_pred CCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCC
Q psy14130 217 CHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEN 296 (494)
Q Consensus 217 ~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~ 296 (494)
+|...|.+++|++++..+++++.++.+++||.++.........+.. ...+.+.+.++.++++| +.|+.|++||.+
T Consensus 161 ~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~---~~d~~i~i~~~~ 235 (388)
T d1erja_ 161 GHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDG--VTTVAVSPGDGKYIAAG---SLDRAVRVWDSE 235 (388)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSC--EEEEEECSTTCCEEEEE---ETTSCEEEEETT
T ss_pred cccccccccccccccccccccccceeeeeeeccccccccccccccc--cccccccCCCCCeEEEE---cCCCeEEEeecc
Confidence 9999999999999999999999999999999999887777665554 56777777767888887 699999999998
Q ss_pred CCCCceeEe-----eecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEe---------cccccCCCCeeEE
Q psy14130 297 DLNTPLALE-----TVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHF---------LNQSLSGAPQRGL 362 (494)
Q Consensus 297 ~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~---------~~~~~~~~~v~~~ 362 (494)
+........ ...+...|.+++|+|++++| ++|+.||.|++||+++++..... .....+...|.++
T Consensus 236 ~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 314 (388)
T d1erja_ 236 TGFLVERLDSENESGTGHKDSVYSVVFTRDGQSV-VSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSV 314 (388)
T ss_dssp TCCEEEEEC------CCCSSCEEEEEECTTSSEE-EEEETTSEEEEEEC---------------CEEEEEECCSSCEEEE
T ss_pred cCccceeeccccccccCCCCCEEEEEECCCCCEE-EEEECCCcEEEEeccCCccccccccccccceeeecccccceEEEE
Confidence 755432221 12355789999999999998 89999999999999876532111 1122346789999
Q ss_pred EEecCCceeeec--cceeEEEEeeC
Q psy14130 363 GFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 363 ~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
+|+|++.+++++ |+.+++|++.+
T Consensus 315 ~~s~~~~~l~sg~~dg~i~vwd~~~ 339 (388)
T d1erja_ 315 ATTQNDEYILSGSKDRGVLFWDKKS 339 (388)
T ss_dssp EECGGGCEEEEEETTSEEEEEETTT
T ss_pred EECCCCCEEEEEeCCCEEEEEECCC
Confidence 999999988875 89999999887
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.95 E-value=2.6e-26 Score=216.96 Aligned_cols=173 Identities=18% Similarity=0.238 Sum_probs=141.5
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEE
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSF 227 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~ 227 (494)
.+.|++||+.++ +.+....++...+.++.|+|.+ ..+++++.|+.|++||++++..+..+.+|...|.+++|
T Consensus 180 d~~i~~~d~~~~-------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~ 251 (355)
T d1nexb2 180 DNTLIVWDVAQM-------KCLYILSGHTDRIYSTIYDHER-KRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRL 251 (355)
T ss_dssp TSCEEEEETTTT-------EEEEEECCCSSCEEEEEEETTT-TEEEEEETTSCEEEEETTTCCEEEEECCCSSCCCEEEE
T ss_pred cceeeeeecccc-------cceeeeeccccccccccccccc-eeeecccccceEEeeecccccccccccccccccccccc
Confidence 357999999987 6677888899999999999998 79999999999999999999999999999999999999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee
Q psy14130 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV 307 (494)
Q Consensus 228 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~ 307 (494)
+ +++|++++.||.|++||++++... +..|... +..+.+.+.++.++++| .|+.|++||+++++.... ...
T Consensus 252 ~--~~~l~~~~~dg~i~iwd~~~~~~~--~~~~~~~-~~~~~~~~~~~~~l~~g----~d~~i~vwd~~tg~~~~~-~~~ 321 (355)
T d1nexb2 252 S--DKFLVSAAADGSIRGWDANDYSRK--FSYHHTN-LSAITTFYVSDNILVSG----SENQFNIYNLRSGKLVHA-NIL 321 (355)
T ss_dssp C--SSEEEEECTTSEEEEEETTTCCEE--EEEECTT-CCCCCEEEECSSEEEEE----ETTEEEEEETTTCCBCCS-CTT
T ss_pred c--cceeeeeeccccccccccccccee--cccccCC-ceEEEEEcCCCCEEEEE----eCCEEEEEECCCCCEEEE-Eec
Confidence 7 469999999999999999987654 4455555 45555544457888888 689999999998654322 223
Q ss_pred cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEe
Q psy14130 308 DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYEL 340 (494)
Q Consensus 308 ~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~ 340 (494)
.+...|.+++|+|+ .++++++.||.++||.+
T Consensus 322 ~~~~~V~~v~~~~~--~~~~~~s~dg~~~l~~~ 352 (355)
T d1nexb2 322 KDADQIWSVNFKGK--TLVAAVEKDGQSFLEIL 352 (355)
T ss_dssp TTCSEEEEEEEETT--EEEEEEESSSCEEEEEE
T ss_pred CCCCCEEEEEEcCC--eEEEEEECCCcEEEEEE
Confidence 46678999999986 35588999999777654
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.95 E-value=9.9e-27 Score=218.33 Aligned_cols=219 Identities=10% Similarity=0.007 Sum_probs=148.7
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccc-cEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe----EEEEecCC--CCc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKR-RVGYIEWHPTAENVVASAGFDYLIILWDVGKGE----ALTVIDCH--PDV 221 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~-~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~----~~~~~~~h--~~~ 221 (494)
+.|++|++... ........+.. ......+.+.. ..+++++.|+++++||++.+. .......+ ...
T Consensus 79 ~~v~~w~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~ 150 (342)
T d1yfqa_ 79 GEILKVDLIGS-------PSFQALTNNEANLGICRICKYGD-DKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVK 150 (342)
T ss_dssp SCEEEECSSSS-------SSEEECBSCCCCSCEEEEEEETT-TEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSC
T ss_pred cceeeeecccc-------ccccccccccccccccccccccc-ccccccccccccceeeccccccceeeecccccccccce
Confidence 47999999877 33333333333 33444455554 799999999999999986433 22233322 234
Q ss_pred eEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEe---eecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCC
Q psy14130 222 INCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQG---VCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDL 298 (494)
Q Consensus 222 v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~ 298 (494)
.....+.+++..+++++.|+.|++||++..+..... ..+... .....+.+.++..++++ +.|+.+.+|+....
T Consensus 151 ~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---s~dg~~~v~~~~~~ 226 (342)
T d1yfqa_ 151 NKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQ-IRDVALLPKEQEGYACS---SIDGRVAVEFFDDQ 226 (342)
T ss_dssp CCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSC-EEEEEECSGGGCEEEEE---ETTSEEEEEECCTT
T ss_pred eeeeeeeccCCceeeecCCCcEEEEecccCcccceeeeecccccc-eeeeEeecCCCCEEEee---cCCCeEEEEEecCC
Confidence 456677888999999999999999999877633222 222222 55566667667777777 68999999997643
Q ss_pred CCcee------E-------eeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEe
Q psy14130 299 NTPLA------L-------ETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFM 365 (494)
Q Consensus 299 ~~~~~------~-------~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~ 365 (494)
..... . ....+...+.+++|+|++++| ++|+.||.|++||+++++.+..+. ...+...++|+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l-asg~~Dg~v~vWD~~~~~~l~~~~----~~~~~~~~~~s 301 (342)
T d1yfqa_ 227 GDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFL-YTAGSDGIISCWNLQTRKKIKNFA----KFNEDSVVKIA 301 (342)
T ss_dssp CCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCE-EEEETTSCEEEEETTTTEEEEECC----CCSSSEEEEEE
T ss_pred cceeeccccceeeeeeeccCCCcccccceeEEecCCccEE-EEECCCCEEEEEECCCCcEEEEec----CCCCCEEEEEE
Confidence 22111 1 011244568899999999998 999999999999999987654332 23445667788
Q ss_pred cCCceeee--ccceeEEEEee
Q psy14130 366 PKRGCDVT--QCEIFRFFKLH 384 (494)
Q Consensus 366 p~~~~~~~--~~~~~~~~~l~ 384 (494)
|++..+++ +|...++|...
T Consensus 302 ~~~~~l~~a~sdd~~~~~~~~ 322 (342)
T d1yfqa_ 302 CSDNILCLATSDDTFKTNAAI 322 (342)
T ss_dssp ECSSEEEEEEECTHHHHCSSS
T ss_pred eCCCEEEEEEcCCcEEEeeee
Confidence 87776665 47777777543
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.95 E-value=2.1e-25 Score=206.63 Aligned_cols=179 Identities=15% Similarity=0.179 Sum_probs=135.7
Q ss_pred EEEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEE-EecCCCCce
Q psy14130 144 LVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALT-VIDCHPDVI 222 (494)
Q Consensus 144 ~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~-~~~~h~~~v 222 (494)
++...+.+++|+.... .... ....+.+++|+|++ ++|++|+.|+.|++||+++++... ....|...|
T Consensus 115 ~~~~~~~i~~~~~~~~---------~~~~--~~~~~~~~~~s~~~-~~l~~g~~dg~i~~~d~~~~~~~~~~~~~~~~~i 182 (299)
T d1nr0a2 115 VAACYKHIAIYSHGKL---------TEVP--ISYNSSCVALSNDK-QFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEI 182 (299)
T ss_dssp EEEESSEEEEEETTEE---------EEEE--CSSCEEEEEECTTS-CEEEEEETTSEEEEEEEETTEEEEEEEEECSSCE
T ss_pred cccccccccccccccc---------cccc--cccccccccccccc-cccccccccccccccccccccccccccccccccc
Confidence 3334457899985422 1222 34567899999998 799999999999999998877543 344689999
Q ss_pred EEEEEcCCCCEEEEEeCCCeEEEEeCCCCceE---EEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCC
Q psy14130 223 NCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVI---SQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLN 299 (494)
Q Consensus 223 ~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~ 299 (494)
++++|+|++++|++++.|+.|++||+.++... ..+.+|... +.+++|+|++ .++++| +.|+.|++||+++..
T Consensus 183 ~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~-v~~l~~s~~~-~~l~sg---s~dg~i~iwd~~~~~ 257 (299)
T d1nr0a2 183 TSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAK-VACVSWSPDN-VRLATG---SLDNSVIVWNMNKPS 257 (299)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSC-EEEEEECTTS-SEEEEE---ETTSCEEEEETTCTT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccc-cccccccccc-cceEEE---cCCCEEEEEECCCCC
Confidence 99999999999999999999999999887644 345567776 8999999985 555555 589999999998765
Q ss_pred CceeEeeecCC-CceEEeEEeCCCCEEEEEEeCCCcEEEEEee
Q psy14130 300 TPLALETVDSS-SGVLFPYYDHDTRILFLAGKGDGNIRYYELT 341 (494)
Q Consensus 300 ~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~ 341 (494)
.........+. ..+.++ +++++++| ++|+.|+.|++||+.
T Consensus 258 ~~~~~~~~~~~~~~v~~~-~~~~~~~l-~s~s~D~~i~iWdl~ 298 (299)
T d1nr0a2 258 DHPIIIKGAHAMSSVNSV-IWLNETTI-VSAGQDSNIKFWNVP 298 (299)
T ss_dssp SCCEEETTSSTTSCEEEE-EEEETTEE-EEEETTSCEEEEECC
T ss_pred cceEEEecCCCCCcEEEE-EECCCCEE-EEEeCCCEEEEEecc
Confidence 44433333344 345544 55667777 888999999999974
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.94 E-value=2.4e-25 Score=204.96 Aligned_cols=179 Identities=11% Similarity=0.063 Sum_probs=134.5
Q ss_pred EEEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCC-CeEEEEECCCCeEEEEec-CCCCc
Q psy14130 144 LVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFD-YLIILWDVGKGEALTVID-CHPDV 221 (494)
Q Consensus 144 ~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d-~~v~iwd~~~~~~~~~~~-~h~~~ 221 (494)
++...+.+.+|+..++ +.+..+.. ...+. ++++++ ..+++++.| +.+++|++...+....+. .|...
T Consensus 96 ~~~~~~~~~~~~~~~~-------~~~~~~~~-~~~~~--~~~~~~-~~~~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 164 (287)
T d1pgua2 96 VLTNDDDLLILQSFTG-------DIIKSVRL-NSPGS--AVSLSQ-NYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAK 164 (287)
T ss_dssp EEETTSEEEEEETTTC-------CEEEEEEC-SSCEE--EEEECS-SEEEEEETTTSCEEEEETTEEEEEEECSSCCSSC
T ss_pred EEeecccceeeeccce-------eeeeeccc-cceee--eeeccC-cceeeeccccceeeeeeccccceeeeeeeccCCc
Confidence 3334456889998887 44444443 33343 456666 456666555 579999997766655554 47889
Q ss_pred eEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEE-EeeecCCCCceEEEEECCC---------CeEEEEEecCCCCceEE
Q psy14130 222 INCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVIS-QGVCHPGTRSSKAVFIGDT---------GRIVTTGFSRHSDRQVG 291 (494)
Q Consensus 222 v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~---------~~l~~~g~~~~~d~~i~ 291 (494)
+++++|+|++.+|++|+.||.|++||+.+++... .+.+|... +.+++|+|.+ +.++++| +.|++|+
T Consensus 165 v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~-v~~~~~~p~~~~~~~~~~~~~~l~sg---s~D~~i~ 240 (287)
T d1pgua2 165 PSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSK-INAISWKPAEKGANEEEIEEDLVATG---SLDTNIF 240 (287)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSC-EEEEEECCCC------CCSCCEEEEE---ETTSCEE
T ss_pred eeEEEeccCccccccccccccccceeecccccccccccccccc-cceeeecccccccccccCCCCeeEee---cCCCeEE
Confidence 9999999999999999999999999999988654 45778776 8999998753 4577777 7999999
Q ss_pred EEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEe
Q psy14130 292 LWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYEL 340 (494)
Q Consensus 292 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~ 340 (494)
+||+++....... ...|...|.+++|+|++ .| ++++.|+.|++|++
T Consensus 241 iw~~~~~~~~~~~-~~~h~~~V~~v~~~~~~-~l-~s~g~D~~v~iW~i 286 (287)
T d1pgua2 241 IYSVKRPMKIIKA-LNAHKDGVNNLLWETPS-TL-VSSGADACIKRWNV 286 (287)
T ss_dssp EEESSCTTCCEEE-TTSSTTCEEEEEEEETT-EE-EEEETTSCEEEEEE
T ss_pred EEECCCCCeEEEE-eCCCCCCeEEEEECCCC-EE-EEEECCCeEEEEEE
Confidence 9999875443332 23467889999999986 45 78889999999996
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=2.5e-24 Score=201.98 Aligned_cols=179 Identities=22% Similarity=0.287 Sum_probs=142.2
Q ss_pred EcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEE
Q psy14130 147 PIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLS 226 (494)
Q Consensus 147 ~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~ 226 (494)
..+.|++||.... ..+..+.+|...+..+.++ + ..+++|+.||.|++||++.++.+..+.+|...+.++.
T Consensus 155 ~d~~i~~~d~~~~-------~~~~~~~~~~~~~~~~~~~--~-~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~ 224 (342)
T d2ovrb2 155 YDFMVKVWDPETE-------TCLHTLQGHTNRVYSLQFD--G-IHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME 224 (342)
T ss_dssp TTSCEEEEEGGGT-------EEEEEECCCSSCEEEEEEC--S-SEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEE
T ss_pred CCCeEEEeecccc-------eeeEEEcCcccccccccCC--C-CEEEEEeCCCeEEEeecccceeeeEecccccceeEEe
Confidence 3457999999877 6777888998888777664 4 5899999999999999999999999999999999988
Q ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEee
Q psy14130 227 FNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALET 306 (494)
Q Consensus 227 ~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~ 306 (494)
++ +++|++++.|+.|++||+...+....+..+.........+..+ +.++++| +.||.|++||+++++....+..
T Consensus 225 ~~--~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~---s~Dg~i~iwd~~tg~~i~~~~~ 298 (342)
T d2ovrb2 225 LK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN-KNFVITS---SDDGTVKLWDLKTGEFIRNLVT 298 (342)
T ss_dssp EE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC-SSEEEEE---ETTSEEEEEETTTCCEEEEEEE
T ss_pred cC--CCEEEEEcCCCEEEEEecccccccccccccceeeeceeecccC-CCeeEEE---cCCCEEEEEECCCCCEEEEEec
Confidence 86 4699999999999999999999888887665442333333444 3455666 5899999999998765333322
Q ss_pred e---cCCCceEEeEEeCCCCEEEEEEeCCCc----EEEEEeeC
Q psy14130 307 V---DSSSGVLFPYYDHDTRILFLAGKGDGN----IRYYELTN 342 (494)
Q Consensus 307 ~---~~~~~v~~~~~~~~~~~l~~~g~~dg~----i~~wd~~~ 342 (494)
. .+...|.+++|+|++..+ ++|+.||+ |++||+..
T Consensus 299 ~~~~~~~~~v~~v~~s~~~~~l-a~g~~dGt~~~~l~~~Df~~ 340 (342)
T d2ovrb2 299 LESGGSGGVVWRIRASNTKLVC-AVGSRNGTEETKLLVLDFDV 340 (342)
T ss_dssp CTTGGGTCEEEEEEECSSEEEE-EEECSSSSSCCEEEEEECCC
T ss_pred ccCCCCCCCEEEEEECCCCCEE-EEEeCCCCCeeEEEEEeCCC
Confidence 1 344679999999998877 99998885 99999864
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=7.3e-23 Score=187.42 Aligned_cols=207 Identities=19% Similarity=0.271 Sum_probs=145.9
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe---EEEEecCCCCceEEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE---ALTVIDCHPDVINCLS 226 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~---~~~~~~~h~~~v~~l~ 226 (494)
.|++|++..+ ........+..... .+.+.. ..++++..++.+++||..... ....+..|...|..+.
T Consensus 76 ~i~~~~~~~~-------~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 145 (293)
T d1p22a2 76 TVRVWDVNTG-------EMLNTLIHHCEAVL--HLRFNN-GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVD 145 (293)
T ss_dssp CEEEEESSSC-------CEEEEECCCCSCEE--EEECCT-TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEE
T ss_pred cccccccccc-------cccccccccccccc--cccccc-cceeecccccceeEeeccccccccccccccccccccccce
Confidence 6999999887 33333333333332 333443 589999999999999997654 3555677889998888
Q ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEee
Q psy14130 227 FNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALET 306 (494)
Q Consensus 227 ~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~ 306 (494)
+.+ ..+++++.|+.|++||+++++.+..+.++... +..+.+.+ . .+++| ..|+.|++||+++.......
T Consensus 146 ~~~--~~~~~~s~d~~i~~~d~~~~~~~~~~~~~~~~-v~~~~~~~--~-~l~~~---~~dg~i~i~d~~~~~~~~~~-- 214 (293)
T d1p22a2 146 FDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRG-IACLQYRD--R-LVVSG---SSDNTIRLWDIECGACLRVL-- 214 (293)
T ss_dssp EET--TEEEEEETTSEEEEEETTTCCEEEEEECCSSC-EEEEEEET--T-EEEEE---ETTSCEEEEETTTCCEEEEE--
T ss_pred ecc--cccccccCCCceeeecCCCCcEEEEEcccccc-cccccCCC--C-eEEEe---cCCCEEEEEecccceeeeee--
Confidence 764 57889999999999999999999999888776 66666653 3 45555 48999999999875442222
Q ss_pred ecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCc--------eEEecccccCCCCeeEEEEecCCceeeecccee
Q psy14130 307 VDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERP--------YIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIF 378 (494)
Q Consensus 307 ~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~--------~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~ 378 (494)
..+...+. .+++++.+| ++|+.||.|++||+..... ....+.. |..+|.+++|++......+.|+.+
T Consensus 215 ~~~~~~v~--~~~~~~~~l-~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~--H~~~V~~v~~d~~~l~s~s~Dg~i 289 (293)
T d1p22a2 215 EGHEELVR--CIRFDNKRI-VSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVE--HSGRVFRLQFDEFQIVSSSHDDTI 289 (293)
T ss_dssp CCCSSCEE--EEECCSSEE-EEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECC--CSSCCCCEEECSSCEEECCSSSEE
T ss_pred cccceeee--eccccceEE-EEEcCCCEEEEEECCCCccccccCCceeeEEecC--CCCCEEEEEEcCCEEEEEecCCEE
Confidence 12333343 466788887 8999999999999865321 1222222 457899999976533333349999
Q ss_pred EEEE
Q psy14130 379 RFFK 382 (494)
Q Consensus 379 ~~~~ 382 (494)
++|+
T Consensus 290 ~iWD 293 (293)
T d1p22a2 290 LIWD 293 (293)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 9996
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.90 E-value=4.1e-22 Score=183.01 Aligned_cols=132 Identities=17% Similarity=0.272 Sum_probs=111.0
Q ss_pred cEEEEEcCCCCCCCCcccceEe-cccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEE-EecCCCCceEEEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMD-LHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALT-VIDCHPDVINCLSF 227 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~-~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~-~~~~h~~~v~~l~~ 227 (494)
.|++|++... ..... ...|...|++++|+|++ .+|++|+.||.|++||+.+++... .+.+|...|.+++|
T Consensus 142 ~v~~~~~~~~-------~~~~~~~~~~~~~v~~~~~s~~~-~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~ 213 (287)
T d1pgua2 142 TIQVFKLSDL-------EVSFDLKTPLRAKPSYISISPSE-TYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISW 213 (287)
T ss_dssp CEEEEETTEE-------EEEEECSSCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEE
T ss_pred eeeeeecccc-------ceeeeeeeccCCceeEEEeccCc-cccccccccccccceeecccccccccccccccccceeee
Confidence 5999998755 22222 33578899999999998 799999999999999999988655 46789999999999
Q ss_pred cCC----------CCEEEEEeCCCeEEEEeCCC-CceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeC
Q psy14130 228 NRD----------GSRLVTTCKDKTVRVLDPRT-GLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDE 295 (494)
Q Consensus 228 ~~~----------~~~l~s~~~d~~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~ 295 (494)
+|+ +.+|++|+.|++|++||+++ ++.+..+.+|... +..+.|+++ +.++++| .|+.|++||+
T Consensus 214 ~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~~~h~~~-V~~v~~~~~-~~l~s~g----~D~~v~iW~i 286 (287)
T d1pgua2 214 KPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDG-VNNLLWETP-STLVSSG----ADACIKRWNV 286 (287)
T ss_dssp CCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTC-EEEEEEEET-TEEEEEE----TTSCEEEEEE
T ss_pred cccccccccccCCCCeeEeecCCCeEEEEECCCCCeEEEEeCCCCCC-eEEEEECCC-CEEEEEE----CCCeEEEEEE
Confidence 874 46899999999999999977 4567777889888 999999987 6787777 8999999985
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=1.8e-21 Score=178.00 Aligned_cols=275 Identities=16% Similarity=0.201 Sum_probs=180.2
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 82 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~ 82 (494)
.+|...|+|++|+.. +|||||.||+|+ +|+....+..... ...... -..++.++..+ .....++.+.++
T Consensus 12 ~~~~~~V~c~~~d~~---~l~sgs~Dg~i~-vWd~~~~~~~~~l--~~H~~~--V~~v~~~~~~l---~s~s~D~~i~~~ 80 (293)
T d1p22a2 12 SETSKGVYCLQYDDQ---KIVSGLRDNTIK-IWDKNTLECKRIL--TGHTGS--VLCLQYDERVI---ITGSSDSTVRVW 80 (293)
T ss_dssp CSSCCCEEEEECCSS---EEEEEESSSCEE-EEESSSCCEEEEE--CCCSSC--EEEEECCSSEE---EEEETTSCEEEE
T ss_pred CCCCCCEEEEEEcCC---EEEEEeCCCeEE-EEECCCCcEEEEE--ecCCCC--Eeeeeccccee---eccccccccccc
Confidence 589999999999999 999999999999 8998876642211 100000 01112233322 122233444433
Q ss_pred eccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCC
Q psy14130 83 PIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLS 162 (494)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~ 162 (494)
.+..... . .... . ........ ....+..+.....+.+.+|+.......
T Consensus 81 ~~~~~~~------~-------------~~~~--~-~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (293)
T d1p22a2 81 DVNTGEM------L-------------NTLI--H-HCEAVLHL----------RFNNGMMVTCSKDRSIAVWDMASPTDI 128 (293)
T ss_dssp ESSSCCE------E-------------EEEC--C-CCSCEEEE----------ECCTTEEEEEETTSCEEEEECSSSSCC
T ss_pred ccccccc------c-------------cccc--c-cccccccc----------cccccceeecccccceeEeeccccccc
Confidence 3321100 0 0000 0 00000000 011122222333446999998876432
Q ss_pred CCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCe
Q psy14130 163 GNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKT 242 (494)
Q Consensus 163 ~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~ 242 (494)
.....+..|...|.++.+.+. .+++++.|+.|++||+.+++.+..+.+|...+..+.++ +..+++++.|+.
T Consensus 129 ----~~~~~~~~~~~~v~~~~~~~~---~~~~~s~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~ 199 (293)
T d1p22a2 129 ----TLRRVLVGHRAAVNVVDFDDK---YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNT 199 (293)
T ss_dssp ----EEEEEECCCSSCEEEEEEETT---EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSC
T ss_pred ----cccccccccccccccceeccc---ccccccCCCceeeecCCCCcEEEEEcccccccccccCC--CCeEEEecCCCE
Confidence 344566789999998888754 68899999999999999999999999999999888886 568999999999
Q ss_pred EEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCC------ceeEee-ecCCCceEE
Q psy14130 243 VRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNT------PLALET-VDSSSGVLF 315 (494)
Q Consensus 243 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~------~~~~~~-~~~~~~v~~ 315 (494)
|++||+++.+.+....+|... +. .+.++ ..++++| +.||.|++||++.... ...... ..|...|.+
T Consensus 200 i~i~d~~~~~~~~~~~~~~~~-v~--~~~~~-~~~l~sg---~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~H~~~V~~ 272 (293)
T d1p22a2 200 IRLWDIECGACLRVLEGHEEL-VR--CIRFD-NKRIVSG---AYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFR 272 (293)
T ss_dssp EEEEETTTCCEEEEECCCSSC-EE--EEECC-SSEEEEE---ETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCC
T ss_pred EEEEecccceeeeeeccccee-ee--ecccc-ceEEEEE---cCCCEEEEEECCCCccccccCCceeeEEecCCCCCEEE
Confidence 999999999999888887765 33 34455 4455566 5899999999753211 112222 346678888
Q ss_pred eEEeCCCCEEEEEEeCCCcEEEEE
Q psy14130 316 PYYDHDTRILFLAGKGDGNIRYYE 339 (494)
Q Consensus 316 ~~~~~~~~~l~~~g~~dg~i~~wd 339 (494)
++|+ +++| ++|+.||+|++||
T Consensus 273 v~~d--~~~l-~s~s~Dg~i~iWD 293 (293)
T d1p22a2 273 LQFD--EFQI-VSSSHDDTILIWD 293 (293)
T ss_dssp EEEC--SSCE-EECCSSSEEEEEC
T ss_pred EEEc--CCEE-EEEecCCEEEEeC
Confidence 8885 5566 8999999999997
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.89 E-value=2.3e-22 Score=188.14 Aligned_cols=213 Identities=10% Similarity=0.106 Sum_probs=152.5
Q ss_pred cceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeE---EEEecCCCCceEEEEEcCC-CCEEEEEeCCCe
Q psy14130 167 EWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEA---LTVIDCHPDVINCLSFNRD-GSRLVTTCKDKT 242 (494)
Q Consensus 167 ~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~---~~~~~~h~~~v~~l~~~~~-~~~l~s~~~d~~ 242 (494)
+.++.+++|++.|++|+|+|++ ++||+|+.||+|+|||+.++.. +....+|.+.|.+++|+|+ +.+|++|+.|+.
T Consensus 2 ~~v~~~~~h~d~I~~l~fsp~~-~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~ 80 (342)
T d1yfqa_ 2 QIVQIEQAPKDYISDIKIIPSK-SLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGE 80 (342)
T ss_dssp EEEECSSCCSSCEEEEEEEGGG-TEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSC
T ss_pred CeEEcCCCCCCCEEEEEEeCCC-CEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccc
Confidence 3456678899999999999998 7999999999999999976542 2333369999999999986 458999999999
Q ss_pred EEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee----cCCCceEEeEE
Q psy14130 243 VRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV----DSSSGVLFPYY 318 (494)
Q Consensus 243 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~----~~~~~v~~~~~ 318 (494)
|++|++..+........+.........+.++...+++.+ .++.+++||++........... ..........+
T Consensus 81 v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (342)
T d1yfqa_ 81 ILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAAS----WDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTM 156 (342)
T ss_dssp EEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEE----TTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEE
T ss_pred eeeeecccccccccccccccccccccccccccccccccc----cccccceeeccccccceeeecccccccccceeeeeee
Confidence 999999998877777666665344555555545555554 8999999998754332222211 11123344566
Q ss_pred eCCCCEEEEEEeCCCcEEEEEeeCCCceEEe-------------------------------------------------
Q psy14130 319 DHDTRILFLAGKGDGNIRYYELTNERPYIHF------------------------------------------------- 349 (494)
Q Consensus 319 ~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~------------------------------------------------- 349 (494)
.+++..+ ++++.|+.|++||+...+.....
T Consensus 157 ~~~~~~~-~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~ 235 (342)
T d1yfqa_ 157 DTNSSRL-IVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKR 235 (342)
T ss_dssp EECSSEE-EEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTC
T ss_pred eccCCce-eeecCCCcEEEEecccCcccceeeeecccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeecccc
Confidence 6777777 77888888888887654321000
Q ss_pred ---------cccccCCCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 350 ---------LNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 350 ---------~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
.....+...+.+++|+|++.+++++ |+.+++|++.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~ 282 (342)
T d1yfqa_ 236 FAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQT 282 (342)
T ss_dssp EEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTT
T ss_pred ceeeeeeeccCCCcccccceeEEecCCccEEEEECCCCEEEEEECCC
Confidence 0000122357899999999998885 89999999987
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.89 E-value=1e-21 Score=189.25 Aligned_cols=171 Identities=11% Similarity=0.104 Sum_probs=128.6
Q ss_pred CcEEEEEcCCCCCCC-----------CcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEe--
Q psy14130 149 HRVKLWYIPDGGLSG-----------NLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVI-- 215 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~-----------~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~-- 215 (494)
+.+++|++....... .+.........+...+.+++|+|++ +||+|+.|++|++||+.+++++..+
T Consensus 146 g~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg--~lasgs~Dg~i~iwd~~~~~~~~~~~~ 223 (393)
T d1sq9a_ 146 GTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELSTLRPLYNFES 223 (393)
T ss_dssp SCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTTTEEEEEEEC
T ss_pred CcEEEEEeecCCcccceeeeeeccceecccceecccCCCCcEEEEEECCCC--EEEEEeCCCcEEEEeeccccccccccc
Confidence 479999986432110 0011122333466678999999986 8999999999999999999877654
Q ss_pred ----cCCCCceEEEEEcCCCCEEEEEeCCC---eEEEEeCCCCceEEEee-------------ecCCCCceEEEEECCCC
Q psy14130 216 ----DCHPDVINCLSFNRDGSRLVTTCKDK---TVRVLDPRTGLVISQGV-------------CHPGTRSSKAVFIGDTG 275 (494)
Q Consensus 216 ----~~h~~~v~~l~~~~~~~~l~s~~~d~---~v~iwd~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~ 275 (494)
.+|...|++++|+|+|++|++|+.|+ .|++||+++++.+..+. +|.+. |.+++|+|++
T Consensus 224 ~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~-V~~l~fspd~- 301 (393)
T d1sq9a_ 224 QHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSW-VMSLSFNDSG- 301 (393)
T ss_dssp CC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSC-EEEEEECSSS-
T ss_pred ccccccccceEEEcccccccceeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCc-eeeeccCCCC-
Confidence 46899999999999999999999987 49999999998877764 68887 9999999985
Q ss_pred eEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceE----EeEEeCCCCEEEEEE
Q psy14130 276 RIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVL----FPYYDHDTRILFLAG 329 (494)
Q Consensus 276 ~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~----~~~~~~~~~~l~~~g 329 (494)
.+|++| +.|++|++||++++.....+. .|...|. .++|+|++..+ +++
T Consensus 302 ~~l~S~---s~D~~v~vWd~~~g~~~~~l~--gH~~~v~~~~~~~~~~~~~~~~-~~~ 353 (393)
T d1sq9a_ 302 ETLCSA---GWDGKLRFWDVKTKERITTLN--MHCDDIEIEEDILAVDEHGDSL-AEP 353 (393)
T ss_dssp SEEEEE---ETTSEEEEEETTTTEEEEEEE--CCGGGCSSGGGCCCBCTTSCBC-SSC
T ss_pred CeeEEE---CCCCEEEEEECCCCCEEEEEC--CcCCcccCCccEEEECCCCCEE-EEc
Confidence 555555 599999999999865433332 3444443 47888988877 544
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.88 E-value=5.4e-21 Score=180.92 Aligned_cols=185 Identities=11% Similarity=0.069 Sum_probs=143.5
Q ss_pred CcEEEEEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCC--CeEEEEECCCCeEEEEecC
Q psy14130 140 GGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFD--YLIILWDVGKGEALTVIDC 217 (494)
Q Consensus 140 ~g~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d--~~v~iwd~~~~~~~~~~~~ 217 (494)
|..++....++|.+||+.++ ...+ + +|...|.+++|+|+| +.|++++.+ ..|++||+.+++. ..+..
T Consensus 15 G~~~a~~~~g~v~v~d~~~~-------~~~~-~-~~~~~v~~~~~spDg-~~l~~~~~~~g~~v~v~d~~~~~~-~~~~~ 83 (360)
T d1k32a3 15 GDLIAFVSRGQAFIQDVSGT-------YVLK-V-PEPLRIRYVRRGGDT-KVAFIHGTREGDFLGIYDYRTGKA-EKFEE 83 (360)
T ss_dssp GGCEEEEETTEEEEECTTSS-------BEEE-C-SCCSCEEEEEECSSS-EEEEEEEETTEEEEEEEETTTCCE-EECCC
T ss_pred CCEEEEEECCeEEEEECCCC-------cEEE-c-cCCCCEEEEEECCCC-CEEEEEEcCCCCEEEEEECCCCcE-EEeeC
Confidence 33444444568999999876 3322 3 699999999999999 566665544 3799999987764 46777
Q ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEec------CCCCceEE
Q psy14130 218 HPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFS------RHSDRQVG 291 (494)
Q Consensus 218 h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~------~~~d~~i~ 291 (494)
|...|.+++|+|+|++|++++.++.+++|++.+++....+..|... +..++|+|++..++.++.. ...++.++
T Consensus 84 ~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~~ 162 (360)
T d1k32a3 84 NLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAM-ITDFTISDNSRFIAYGFPLKHGETDGYVMQAIH 162 (360)
T ss_dssp CCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSC-CCCEEECTTSCEEEEEEEECSSTTCSCCEEEEE
T ss_pred CCceEEeeeecccccccceeccccccccccccccceeeeeeccccc-ccchhhccceeeeeeeccccccceeecccccee
Confidence 9999999999999999999999999999999999988888888776 8889999997666655421 23467899
Q ss_pred EEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEe
Q psy14130 292 LWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYEL 340 (494)
Q Consensus 292 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~ 340 (494)
+||+.+... .....+...+..+.|+|||+.| ++++.|+.+++||.
T Consensus 163 v~d~~~~~~---~~~~~~~~~~~~~~~spdg~~l-~~~s~~~~~~~~d~ 207 (360)
T d1k32a3 163 VYDMEGRKI---FAATTENSHDYAPAFDADSKNL-YYLSYRSLDPSPDR 207 (360)
T ss_dssp EEETTTTEE---EECSCSSSBEEEEEECTTSCEE-EEEESCCCCCEECS
T ss_pred eeccccCce---eeecccccccccccccCCCCEE-EEEeCCCceEcccc
Confidence 999986432 2223455677888999999988 77778888888874
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.85 E-value=4.9e-20 Score=179.27 Aligned_cols=224 Identities=10% Similarity=0.026 Sum_probs=157.6
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEE--Ee---cCCCCceEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALT--VI---DCHPDVINC 224 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~--~~---~~h~~~v~~ 224 (494)
+|+|||+.++ +.+.++..|. .+..++|+|+| ++|++++.|++|++||+.+++... .+ .+|.+.+.+
T Consensus 43 ~v~vwD~~t~-------~~~~~l~~g~-~~~~vafSPDG-k~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~~s 113 (426)
T d1hzua2 43 QIALVDGDSK-------KIVKVIDTGY-AVHISRMSASG-RYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESS 113 (426)
T ss_dssp EEEEEETTTC-------SEEEEEECCS-SEEEEEECTTS-CEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEEC
T ss_pred EEEEEECCCC-------cEEEEEeCCC-CeeEEEECCCC-CEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcceEEe
Confidence 7999999998 6777887764 58999999999 699999999999999999886433 23 246666778
Q ss_pred EEEcCCCCEEEEE-eCCCeEEEEeCCCCceEEEeeecC------------------------------------------
Q psy14130 225 LSFNRDGSRLVTT-CKDKTVRVLDPRTGLVISQGVCHP------------------------------------------ 261 (494)
Q Consensus 225 l~~~~~~~~l~s~-~~d~~v~iwd~~~~~~~~~~~~~~------------------------------------------ 261 (494)
++|+|||++++++ ..++.+++||..+++++..+..|.
T Consensus 114 ~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~~~~ 193 (426)
T d1hzua2 114 KFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYK 193 (426)
T ss_dssp CSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECS
T ss_pred eeecCCCCEEEEeecCCCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCCeEEEEEec
Confidence 8889999987554 578999999998876554332211
Q ss_pred ------------CCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCce---------------------------
Q psy14130 262 ------------GTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPL--------------------------- 302 (494)
Q Consensus 262 ------------~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~--------------------------- 302 (494)
+..+..+.+.|++..++++. ..+..+.++|..+.....
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (426)
T d1hzua2 194 DIDNLTVTSIGAAPFLADGGWDSSHRYFMTAA---NNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWST 270 (426)
T ss_dssp SSSSCEEEEEECCSSEEEEEECTTSCEEEEEE---TTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEEETTTEEEEEE
T ss_pred cccceeeEEeccCCccEeeeECCCCcEEEeee---ecccceeeeecccccEEEEeccCCcccccceeeeecCCCCceEEe
Confidence 01133566777766666665 455566666654322100
Q ss_pred ------------------------eEeee-cCCCceEEeEEeCCCCEEEE------EEeCCCcEEEEEeeCCCceEEecc
Q psy14130 303 ------------------------ALETV-DSSSGVLFPYYDHDTRILFL------AGKGDGNIRYYELTNERPYIHFLN 351 (494)
Q Consensus 303 ------------------------~~~~~-~~~~~v~~~~~~~~~~~l~~------~g~~dg~i~~wd~~~~~~~~~~~~ 351 (494)
....+ .|...+..++|+||+++|++ +++.|++|++||+.+++.....+.
T Consensus 271 ~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~~~~ 350 (426)
T d1hzua2 271 SHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLP 350 (426)
T ss_dssp ECTTTCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEEC
T ss_pred ccCCCceEEEeeccccccccccceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEECCCCCcCeEEec
Confidence 00011 23456788999999999954 466789999999999886555432
Q ss_pred c------ccCCCCeeEEEEecCCcee-ee------ccceeEEEEeeC
Q psy14130 352 Q------SLSGAPQRGLGFMPKRGCD-VT------QCEIFRFFKLHT 385 (494)
Q Consensus 352 ~------~~~~~~v~~~~~~p~~~~~-~~------~~~~~~~~~l~~ 385 (494)
. -.+...+..++|+|||..+ ++ .++.+++|+..+
T Consensus 351 ~~~~~~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T 397 (426)
T d1hzua2 351 IAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKT 397 (426)
T ss_dssp HHHHHCCCSSCCCEEEEEECSSSSEEEEEECCCTTSCCEEEEEETTT
T ss_pred cchhcccCCCCccEEEEEECCCCCEEEEEEecCCCCCCeEEEEECCC
Confidence 1 1234568899999999855 32 267799999887
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.85 E-value=5.4e-20 Score=173.92 Aligned_cols=131 Identities=9% Similarity=0.060 Sum_probs=106.8
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcC
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNR 229 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~ 229 (494)
.|++||..++. ...+..|...|.+++|+|++ ++|++++.++.+++|++.+++....+..|...+.+++|+|
T Consensus 67 ~v~v~d~~~~~--------~~~~~~~~~~v~~~~~spdg-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp 137 (360)
T d1k32a3 67 FLGIYDYRTGK--------AEKFEENLGNVFAMGVDRNG-KFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISD 137 (360)
T ss_dssp EEEEEETTTCC--------EEECCCCCCSEEEEEECTTS-SEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECT
T ss_pred EEEEEECCCCc--------EEEeeCCCceEEeeeecccc-cccceeccccccccccccccceeeeeecccccccchhhcc
Confidence 58999998762 34677899999999999998 7999999999999999999999999999999999999999
Q ss_pred CCCEEEEEe----------CCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeC
Q psy14130 230 DGSRLVTTC----------KDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDE 295 (494)
Q Consensus 230 ~~~~l~s~~----------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~ 295 (494)
+|++|+.++ .++.+++||+.+++..... .+... ...+.|+|++..|++++ .++.+++||.
T Consensus 138 dg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~-~~~~~-~~~~~~spdg~~l~~~s----~~~~~~~~d~ 207 (360)
T d1k32a3 138 NSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAAT-TENSH-DYAPAFDADSKNLYYLS----YRSLDPSPDR 207 (360)
T ss_dssp TSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECS-CSSSB-EEEEEECTTSCEEEEEE----SCCCCCEECS
T ss_pred ceeeeeeeccccccceeeccccceeeeccccCceeeec-ccccc-cccccccCCCCEEEEEe----CCCceEcccc
Confidence 999998654 3457999999988754433 34443 67788999866666555 6777777764
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.83 E-value=6.4e-18 Score=155.23 Aligned_cols=185 Identities=9% Similarity=0.044 Sum_probs=144.0
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcC
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNR 229 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~ 229 (494)
.+.+|+..++ +....+. +...+.++.|+|++..+++++..++.+.+|+..++..+..+.. ...+..++++|
T Consensus 97 ~~~~~~~~~~-------~~~~~~~-~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 167 (301)
T d1l0qa2 97 TLSVIDTTSN-------TVAGTVK-TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSV-GRSPKGIAVTP 167 (301)
T ss_dssp EEEEEETTTT-------EEEEEEE-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-CSSEEEEEECT
T ss_pred eeeecccccc-------eeeeecc-ccccceEEEeecCCCeeeeeeccccceeeeeccccceeeeccc-CCCceEEEeec
Confidence 5889999887 5555555 4456789999999966667788899999999999998888874 45688999999
Q ss_pred CCCEEEEEeCC-CeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec
Q psy14130 230 DGSRLVTTCKD-KTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD 308 (494)
Q Consensus 230 ~~~~l~s~~~d-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~ 308 (494)
++..+++++.+ +.+.+|+....+.......+.. +..+++.+++..+++++ ....++.|++||+.+.+. ...+.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~v~~-~~~~~~~v~v~D~~t~~~---~~~~~ 241 (301)
T d1l0qa2 168 DGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAA--PSGIAVNPEGTKAYVTN-VDKYFNTVSMIDTGTNKI---TARIP 241 (301)
T ss_dssp TSSEEEEEETTTTEEEEEETTTTEEEEEEECSSE--EEEEEECTTSSEEEEEE-ECSSCCEEEEEETTTTEE---EEEEE
T ss_pred cccceeeecccccccccccccceeeeecccccCC--cceeecccccccccccc-ccceeeeeeeeecCCCeE---EEEEc
Confidence 99988888765 6777888887776666655543 67888999977776654 223457899999987543 23344
Q ss_pred CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEe
Q psy14130 309 SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHF 349 (494)
Q Consensus 309 ~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~ 349 (494)
....+..++|+|||++||++++.|+.|++||+.+++.+..+
T Consensus 242 ~~~~~~~va~spdg~~l~va~~~~~~i~v~D~~t~~~~~~~ 282 (301)
T d1l0qa2 242 VGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATM 282 (301)
T ss_dssp CCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCCCEEEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEEE
Confidence 55678999999999999899999999999999999765443
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.82 E-value=3.4e-17 Score=150.28 Aligned_cols=216 Identities=13% Similarity=0.121 Sum_probs=169.4
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
++|++||+.++ +.+..+..|. .+..++|++++..+++++..++.+.+|+..+++....+.. ...+.++.|+
T Consensus 54 ~~i~v~d~~t~-------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 124 (301)
T d1l0qa2 54 NDVSIIDTATN-------NVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT-GKSPLGLALS 124 (301)
T ss_dssp TEEEEEETTTT-------EEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-SSSEEEEEEC
T ss_pred CEEEEEECCCC-------ceeeeeeccc-cccccccccccccccccccccceeeecccccceeeeeccc-cccceEEEee
Confidence 47999999988 6667777665 4689999999966777788889999999999998888874 4567889999
Q ss_pred CCCCEEEE-EeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee
Q psy14130 229 RDGSRLVT-TCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV 307 (494)
Q Consensus 229 ~~~~~l~s-~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~ 307 (494)
|+++.++. +..++.+.+|+..+++.+..+..+.. +..+.+.+++..+++++ ..++.+.+|+...... ....
T Consensus 125 ~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~---~~~~ 196 (301)
T d1l0qa2 125 PDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRS--PKGIAVTPDGTKVYVAN---FDSMSISVIDTVTNSV---IDTV 196 (301)
T ss_dssp TTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSS--EEEEEECTTSSEEEEEE---TTTTEEEEEETTTTEE---EEEE
T ss_pred cCCCeeeeeeccccceeeeeccccceeeecccCCC--ceEEEeeccccceeeec---ccccccccccccceee---eecc
Confidence 99997754 55688999999999998888776654 57889999988888887 5678888888765332 2333
Q ss_pred cCCCceEEeEEeCCCCEEEEEEe--CCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCcee-eec--cceeEEEE
Q psy14130 308 DSSSGVLFPYYDHDTRILFLAGK--GDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCD-VTQ--CEIFRFFK 382 (494)
Q Consensus 308 ~~~~~v~~~~~~~~~~~l~~~g~--~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~-~~~--~~~~~~~~ 382 (494)
.....+..++++++++.+++++. .++.|++||+.+++....+ ..+..+.+++|+|||..+ +++ ++.+++|+
T Consensus 197 ~~~~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~~~~~~~----~~~~~~~~va~spdg~~l~va~~~~~~i~v~D 272 (301)
T d1l0qa2 197 KVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARI----PVGPDPAGIAVTPDGKKVYVALSFCNTVSVID 272 (301)
T ss_dssp ECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEE----ECCSSEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred cccCCcceeeccccccccccccccceeeeeeeeecCCCeEEEEE----cCCCCEEEEEEeCCCCEEEEEECCCCeEEEEE
Confidence 45567788999999999866653 4578999999998764332 234568999999999854 553 78999999
Q ss_pred eeC
Q psy14130 383 LHT 385 (494)
Q Consensus 383 l~~ 385 (494)
+.+
T Consensus 273 ~~t 275 (301)
T d1l0qa2 273 TAT 275 (301)
T ss_dssp TTT
T ss_pred CCC
Confidence 987
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.81 E-value=8.3e-18 Score=163.27 Aligned_cols=193 Identities=9% Similarity=0.100 Sum_probs=130.4
Q ss_pred ecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecC--CCCceEEEEEcCCCC-EE--EEEeCCCeEEE
Q psy14130 171 DLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDC--HPDVINCLSFNRDGS-RL--VTTCKDKTVRV 245 (494)
Q Consensus 171 ~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~--h~~~v~~l~~~~~~~-~l--~s~~~d~~v~i 245 (494)
...++...+..++|+|++..++++...+..+.+++..+++.+..+.. +......+.+...+. .+ ++.+.|+.+.+
T Consensus 201 ~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~ 280 (426)
T d1hzua2 201 TSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISL 280 (426)
T ss_dssp EEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEEETTTEEEEEEECTTTCEEEE
T ss_pred EEeccCCccEeeeECCCCcEEEeeeecccceeeeecccccEEEEeccCCcccccceeeeecCCCCceEEeccCCCceEEE
Confidence 34467888999999999955555556777899999999988776642 222233344433332 22 23345788888
Q ss_pred EeCCC-------CceEEEeeecCCCCceEEEEECCCCeEEEEEe---cCCCCceEEEEeCCCCCCceeEee-------ec
Q psy14130 246 LDPRT-------GLVISQGVCHPGTRSSKAVFIGDTGRIVTTGF---SRHSDRQVGLWDENDLNTPLALET-------VD 308 (494)
Q Consensus 246 wd~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~---~~~~d~~i~iwd~~~~~~~~~~~~-------~~ 308 (494)
|+... ++....+.+|... +..++|+|++.++++... +...+++|+|||+.+++....+.. ..
T Consensus 281 ~~~~~~~~~~~~~~~~~~l~g~~~~-v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~~~~~~~~~~~~~ 359 (426)
T d1hzua2 281 IGTDPKNHPQYAWKKVAELQGQGGG-SLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGE 359 (426)
T ss_dssp EECCTTTCTTTBTSEEEEEECSSSC-CCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCS
T ss_pred eeccccccccccceEeEEEecCCCc-eeEEEcCCCCceEEEeecCCCCcccCCEEEEEECCCCCcCeEEeccchhcccCC
Confidence 87654 3678889999877 889999999665554210 114578999999998776544321 13
Q ss_pred CCCceEEeEEeCCCCEEEEEE----eCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeee
Q psy14130 309 SSSGVLFPYYDHDTRILFLAG----KGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVT 373 (494)
Q Consensus 309 ~~~~v~~~~~~~~~~~l~~~g----~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~ 373 (494)
+...+..++|+|||+++++++ +.||.|++||..+.+.. ..+... + .++|+|.+.+.
T Consensus 360 ~~~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T~k~~-~~i~~~----~----~~tp~Gk~~~~ 419 (426)
T d1hzua2 360 GAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLK-AVVKDP----R----LITPTGKFNVY 419 (426)
T ss_dssp SCCCEEEEEECSSSSEEEEEECCCTTSCCEEEEEETTTTEEE-EEECCT----T----CCSEEEEEEHH
T ss_pred CCccEEEEEECCCCCEEEEEEecCCCCCCeEEEEECCCCeEE-EEECCC----C----ccCCCceEeEe
Confidence 456688999999999887764 46888999999998753 223222 1 33577766543
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.80 E-value=6.5e-18 Score=164.01 Aligned_cols=223 Identities=10% Similarity=-0.052 Sum_probs=163.9
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeE--EEEe---cCCCCceEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEA--LTVI---DCHPDVINC 224 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~--~~~~---~~h~~~v~~ 224 (494)
+|.|||..++ +.+..+..| ..+..++|+|+| ++|++++.|++|++||+.+++. +..+ .+|.+.+.+
T Consensus 43 ~v~v~D~~t~-------~v~~~~~~g-~~~~~v~fSpDG-~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~s 113 (432)
T d1qksa2 43 QIALIDGSTY-------EIKTVLDTG-YAVHISRLSASG-RYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETS 113 (432)
T ss_dssp EEEEEETTTC-------CEEEEEECS-SCEEEEEECTTS-CEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEEC
T ss_pred EEEEEECCCC-------cEEEEEeCC-CCeeEEEECCCC-CEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCeEEe
Confidence 7999999999 677777766 469999999999 7999999999999999987753 3333 345666777
Q ss_pred EEEcCCCCEE-EEEeCCCeEEEEeCCCCceEEEeeecC----------CCCceEEEEECCCCeEEEEEecCCCCceEEEE
Q psy14130 225 LSFNRDGSRL-VTTCKDKTVRVLDPRTGLVISQGVCHP----------GTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLW 293 (494)
Q Consensus 225 l~~~~~~~~l-~s~~~d~~v~iwd~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iw 293 (494)
..|+|||++| ++++.++.|++||..+++++..+..|. ......+.+++++..++++. ..++.|.+|
T Consensus 114 ~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~---~~~~~i~~~ 190 (432)
T d1qksa2 114 KMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV---KETGKILLV 190 (432)
T ss_dssp CSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEE---TTTTEEEEE
T ss_pred cccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEE---ccCCeEEEE
Confidence 7888999976 678889999999999999888776542 22355678889877888877 788999999
Q ss_pred eCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccc--cCCCCeeEEEEecCCcee
Q psy14130 294 DENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQS--LSGAPQRGLGFMPKRGCD 371 (494)
Q Consensus 294 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~--~~~~~v~~~~~~p~~~~~ 371 (494)
|..+... .....+.....+..++|+|+|+++++++..++.+.++|..+++......... .+........+...+...
T Consensus 191 d~~~~~~-~~~~~i~~g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~ 269 (432)
T d1qksa2 191 DYTDLNN-LKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVW 269 (432)
T ss_dssp ETTCSSE-EEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEE
T ss_pred EccCCCc-ceEEEEcccCccccceECCCCCEEEEeccccceEEEeecccceEEEEeccCccccccCcccceecCCCCcee
Confidence 9887543 2334455666788999999999997888788889999998877643332221 122333334444344433
Q ss_pred ee---ccceeEEEEeeC
Q psy14130 372 VT---QCEIFRFFKLHT 385 (494)
Q Consensus 372 ~~---~~~~~~~~~l~~ 385 (494)
.+ +++.+.+|....
T Consensus 270 ~~~~lg~~~v~~~~~~~ 286 (432)
T d1qksa2 270 ATSHMGDDSVALIGTDP 286 (432)
T ss_dssp EEEBSSSSEEEEEECCT
T ss_pred cccccCCceEEeccccc
Confidence 33 367778887554
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.78 E-value=7e-17 Score=150.55 Aligned_cols=236 Identities=10% Similarity=0.129 Sum_probs=161.3
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEE-EEEeCCCeEEEEECCCCeEEEE---ecCCCCceEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVV-ASAGFDYLIILWDVGKGEALTV---IDCHPDVINC 224 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l-~s~s~d~~v~iwd~~~~~~~~~---~~~h~~~v~~ 224 (494)
++|++|++...+.. +.++. ..|.+.|.+|+|+|+| ++| +++..|+.|++|++........ ...+...+..
T Consensus 14 ~~I~v~~~~~~~~l----~~~~~-~~~~~~v~~la~spDG-~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~p~~ 87 (333)
T d1ri6a_ 14 QQIHVWNLNHEGAL----TLTQV-VDVPGQVQPMVVSPDK-RYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTH 87 (333)
T ss_dssp TEEEEEEECTTSCE----EEEEE-EECSSCCCCEEECTTS-SEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSE
T ss_pred CcEEEEEEcCCCCe----EEEEE-EcCCCCEeEEEEeCCC-CEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCCceE
Confidence 36999999765321 22222 3588899999999999 555 5666689999999976532222 2235566788
Q ss_pred EEEcCCCCEEEEEeC-CCeEEEEeCCCCceEEEe--eecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCc
Q psy14130 225 LSFNRDGSRLVTTCK-DKTVRVLDPRTGLVISQG--VCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTP 301 (494)
Q Consensus 225 l~~~~~~~~l~s~~~-d~~v~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~ 301 (494)
++|+|||++|++++. ++.+.+|+.......... ..+... +..+.+++++..+++++ ..+..|.+|+.......
T Consensus 88 l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~v~~s~d~~~~~~~~---~~~~~i~~~~~~~~~~~ 163 (333)
T d1ri6a_ 88 ISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDG-CHSANISPDNRTLWVPA---LKQDRICLFTVSDDGHL 163 (333)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTT-BCCCEECTTSSEEEEEE---GGGTEEEEEEECTTSCE
T ss_pred EEEcCCCCEEeecccCCCceeeeccccccceecccccCCCcc-ceEEEeeecceeeeccc---cccceeeEEEeccCCcc
Confidence 999999999999885 778999998776643332 333333 67788888877777776 56667777775432211
Q ss_pred eeEe--------------------------------------------------e-------ecCCCceEEeEEeCCCCE
Q psy14130 302 LALE--------------------------------------------------T-------VDSSSGVLFPYYDHDTRI 324 (494)
Q Consensus 302 ~~~~--------------------------------------------------~-------~~~~~~v~~~~~~~~~~~ 324 (494)
.... . .........+++++++++
T Consensus 164 ~~~~~~~~~~~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~ 243 (333)
T d1ri6a_ 164 VAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRH 243 (333)
T ss_dssp EEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSE
T ss_pred eeeeceeeeeecCCCccEEEEeccceeEEeeccccCceEEEeecccccceeeeeeeeeeecCCCccccceeEEEecccCc
Confidence 0000 0 001123445778999999
Q ss_pred EEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeee-c--cceeEEEEeeCCCCeEEEeE
Q psy14130 325 LFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVT-Q--CEIFRFFKLHTTRNMCEPIS 394 (494)
Q Consensus 325 l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~-~--~~~~~~~~l~~~~~~~~~~~ 394 (494)
+++++..++.+.+|++..................+++++|+|||..++. + ++.+++|+++...+.++++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~spDGk~l~va~~~~~~v~v~~id~~tG~l~~~~ 316 (333)
T d1ri6a_ 244 LYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKG 316 (333)
T ss_dssp EEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEE
T ss_pred eeeecccCCeEEEEEEcCCCCEEEEEEEeCCCCCeeEEEEeCCCCEEEEEECCCCeEEEEEEECCCCcEEEEE
Confidence 9888889999999999877655555444444566889999999996544 3 67899999876445566554
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.76 E-value=1.7e-16 Score=147.87 Aligned_cols=215 Identities=9% Similarity=-0.038 Sum_probs=155.9
Q ss_pred CcEEEEEcCCCCCCCCcccceEeccc--ccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCC-----c
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHG--HKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPD-----V 221 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~--h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~-----~ 221 (494)
++|+|||+.++ +.+.++.. +...+.+++|+|+|..++++++.++.|.+||+.+++.+..+..+.. .
T Consensus 11 ~~v~v~D~~s~-------~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~ 83 (337)
T d1pbyb_ 11 DKLVVIDTEKM-------AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKS 83 (337)
T ss_dssp TEEEEEETTTT-------EEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEEC
T ss_pred CEEEEEECCCC-------eEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCcccccc
Confidence 47999999988 55555543 4556789999999943457788899999999999999888876543 3
Q ss_pred eEEEEEcCCCCEEEEEe------------CCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCce
Q psy14130 222 INCLSFNRDGSRLVTTC------------KDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQ 289 (494)
Q Consensus 222 v~~l~~~~~~~~l~s~~------------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~ 289 (494)
+..++|+|++++++++. .+..+.+||..+++.+..+..+.. +..+.+++++..+++++ . .
T Consensus 84 ~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~--~~~~~~s~dg~~l~~~~----~--~ 155 (337)
T d1pbyb_ 84 LFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQ--ITMLAWARDGSKLYGLG----R--D 155 (337)
T ss_dssp TTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSS--CCCEEECTTSSCEEEES----S--S
T ss_pred eeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEeccccCC--ceEEEEcCCCCEEEEEc----C--C
Confidence 45799999999998776 467899999999998888776544 67889999966665543 3 3
Q ss_pred EEEEeCCCCCCcee----------------------------------------------------------------Ee
Q psy14130 290 VGLWDENDLNTPLA----------------------------------------------------------------LE 305 (494)
Q Consensus 290 i~iwd~~~~~~~~~----------------------------------------------------------------~~ 305 (494)
+.+||..+...... ..
T Consensus 156 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (337)
T d1pbyb_ 156 LHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMRE 235 (337)
T ss_dssp EEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEE
T ss_pred cceeeeecCcEEEEeecCCccccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcEEEEE
Confidence 56677543211000 00
Q ss_pred eecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEe
Q psy14130 306 TVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKL 383 (494)
Q Consensus 306 ~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l 383 (494)
...+...+..+.++|++..+ +.+ ++.|++||+.+++.+... .....+.+++|+|||..++++ ++.+++|++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~-~~~--~~~i~v~d~~~~~~~~~~----~~~~~~~~~~~s~dG~~l~v~~~~~~i~v~D~ 308 (337)
T d1pbyb_ 236 VRIMDVFYFSTAVNPAKTRA-FGA--YNVLESFDLEKNASIKRV----PLPHSYYSVNVSTDGSTVWLGGALGDLAAYDA 308 (337)
T ss_dssp EEECSSCEEEEEECTTSSEE-EEE--ESEEEEEETTTTEEEEEE----ECSSCCCEEEECTTSCEEEEESBSSEEEEEET
T ss_pred ecCCCcceEEEEecccceEE-EEc--cccEEEEECCCCcEEEEE----cCCCCEEEEEECCCCCEEEEEeCCCcEEEEEC
Confidence 11122344556778888877 333 589999999998865443 234568999999999876553 888999999
Q ss_pred eC
Q psy14130 384 HT 385 (494)
Q Consensus 384 ~~ 385 (494)
.+
T Consensus 309 ~t 310 (337)
T d1pbyb_ 309 ET 310 (337)
T ss_dssp TT
T ss_pred CC
Confidence 87
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.75 E-value=1e-15 Score=142.43 Aligned_cols=180 Identities=13% Similarity=0.116 Sum_probs=126.8
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccc-----cccEEEEEEcCCCCCEEEEEe------------CCCeEEEEECCCCeE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGH-----KRRVGYIEWHPTAENVVASAG------------FDYLIILWDVGKGEA 211 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h-----~~~V~~~~~~p~~~~~l~s~s------------~d~~v~iwd~~~~~~ 211 (494)
+.|.+||+.+++ .+..+..+ ...+..++|+|++ ..++++. .+..+.+||..+++.
T Consensus 56 ~~v~v~D~~t~~-------~~~~~~~~~~~~~~~~~~~v~~s~dg-~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 127 (337)
T d1pbyb_ 56 ESLVKIDLVTGE-------TLGRIDLSTPEERVKSLFGAALSPDG-KTLAIYESPVRLELTHFEVQPTRVALYDAETLSR 127 (337)
T ss_dssp TEEEEEETTTCC-------EEEEEECCBTTEEEECTTCEEECTTS-SEEEEEEEEEEECSSCEEECCCEEEEEETTTTEE
T ss_pred CeEEEEECCCCc-------EEEEEecCCCcccccceeeEEEcCCC-cEEEEeecCCcceeeeccccccceeeccccCCeE
Confidence 369999999984 33333333 3345579999998 5676665 467899999999998
Q ss_pred EEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecC------------------------------
Q psy14130 212 LTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHP------------------------------ 261 (494)
Q Consensus 212 ~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~------------------------------ 261 (494)
+..+. +...+.+++|+|+|+++++++.+ +.+||..+++....+..+.
T Consensus 128 ~~~~~-~~~~~~~~~~s~dg~~l~~~~~~--~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (337)
T d1pbyb_ 128 RKAFE-APRQITMLAWARDGSKLYGLGRD--LHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYT 204 (337)
T ss_dssp EEEEE-CCSSCCCEEECTTSSCEEEESSS--EEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEE
T ss_pred EEecc-ccCCceEEEEcCCCCEEEEEcCC--cceeeeecCcEEEEeecCCccccceecCCcceeeccccccceeeeeeee
Confidence 88887 45668899999999999998754 6778887766544432211
Q ss_pred -----------------------------------CCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEee
Q psy14130 262 -----------------------------------GTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALET 306 (494)
Q Consensus 262 -----------------------------------~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~ 306 (494)
......+.+.++ +.++.++ ++.|++||+.+.... ..
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-----~~~i~v~d~~~~~~~---~~ 275 (337)
T d1pbyb_ 205 ARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPA-KTRAFGA-----YNVLESFDLEKNASI---KR 275 (337)
T ss_dssp EBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTT-SSEEEEE-----ESEEEEEETTTTEEE---EE
T ss_pred eeeccceeeecccCccEEEEEcCCCcEEEEEecCCCcceEEEEeccc-ceEEEEc-----cccEEEEECCCCcEE---EE
Confidence 001222333333 3334433 688999999875543 33
Q ss_pred ecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEe
Q psy14130 307 VDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHF 349 (494)
Q Consensus 307 ~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~ 349 (494)
+.....+.+++|+|||++| ++++.|+.|++||..+.+.+..+
T Consensus 276 ~~~~~~~~~~~~s~dG~~l-~v~~~~~~i~v~D~~t~~~v~~i 317 (337)
T d1pbyb_ 276 VPLPHSYYSVNVSTDGSTV-WLGGALGDLAAYDAETLEKKGQV 317 (337)
T ss_dssp EECSSCCCEEEECTTSCEE-EEESBSSEEEEEETTTCCEEEEE
T ss_pred EcCCCCEEEEEECCCCCEE-EEEeCCCcEEEEECCCCcEEEEE
Confidence 3455678899999999999 56779999999999998875443
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.74 E-value=3.1e-16 Score=152.03 Aligned_cols=189 Identities=12% Similarity=0.001 Sum_probs=142.6
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce--EEEee---ecCCCC
Q psy14130 190 NVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLV--ISQGV---CHPGTR 264 (494)
Q Consensus 190 ~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~--~~~~~---~~~~~~ 264 (494)
.++++.+.||+|.+||..+++.+..+..+ ..+..++|+|||+++++++.|+.+++||+.+++. +.++. .|.+.
T Consensus 33 ~~~v~~~d~g~v~v~D~~t~~v~~~~~~g-~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~- 110 (432)
T d1qksa2 33 LFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSI- 110 (432)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEE-
T ss_pred EEEEEEcCCCEEEEEECCCCcEEEEEeCC-CCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCe-
Confidence 34699999999999999999999999876 4699999999999999999999999999988763 33333 22222
Q ss_pred ceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEe---------eecCCCceEEeEEeCCCCEEEEEEeCCCcE
Q psy14130 265 SSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALE---------TVDSSSGVLFPYYDHDTRILFLAGKGDGNI 335 (494)
Q Consensus 265 ~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~---------~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i 335 (494)
+....|+|++.++++++ ..++.|++||..+........ ..........+.++|++..++++...++.|
T Consensus 111 ~~s~~~SpDG~~l~vs~---~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i 187 (432)
T d1qksa2 111 ETSKMEGWEDKYAIAGA---YWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKI 187 (432)
T ss_dssp EECCSTTCTTTEEEEEE---EETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEE
T ss_pred EEecccCCCCCEEEEEc---CCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCeE
Confidence 33334567877788888 689999999998765432221 112334566788999999998999999999
Q ss_pred EEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec---cceeEEEEeeC
Q psy14130 336 RYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ---CEIFRFFKLHT 385 (494)
Q Consensus 336 ~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~---~~~~~~~~l~~ 385 (494)
.+||..+.+... +.....+..+.+++|+|+|..++.. +..+.+++...
T Consensus 188 ~~~d~~~~~~~~--~~~i~~g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~~ 238 (432)
T d1qksa2 188 LLVDYTDLNNLK--TTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKE 238 (432)
T ss_dssp EEEETTCSSEEE--EEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTT
T ss_pred EEEEccCCCcce--EEEEcccCccccceECCCCCEEEEeccccceEEEeeccc
Confidence 999998876432 1223345678999999999865543 56777777655
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.70 E-value=9.2e-16 Score=143.36 Aligned_cols=216 Identities=13% Similarity=0.042 Sum_probs=146.2
Q ss_pred CcEEEEEcCCCCCCCCcccceEecc-cccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCC------Cc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLH-GHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHP------DV 221 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~-~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~------~~ 221 (494)
++|.+||+.++ +.+.+++ .|...+.+++|+|+|..++++++.++.|++||+.+++.+..+.... ..
T Consensus 18 ~~v~v~D~~t~-------~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~~~~~~~~~~~ 90 (346)
T d1jmxb_ 18 NNLHVVDVASD-------TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRS 90 (346)
T ss_dssp TEEEEEETTTT-------EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEEC
T ss_pred CEEEEEECCCC-------CEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeecccccccccCCc
Confidence 47999999998 6666665 4566788999999995456777889999999999999888775432 24
Q ss_pred eEEEEEcCCCCEEEEEe------------CCCeEEEEeCCCCceEEEeeecCCCC-ceEEEEECCCCeEEEEEecCCCCc
Q psy14130 222 INCLSFNRDGSRLVTTC------------KDKTVRVLDPRTGLVISQGVCHPGTR-SSKAVFIGDTGRIVTTGFSRHSDR 288 (494)
Q Consensus 222 v~~l~~~~~~~~l~s~~------------~d~~v~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~g~~~~~d~ 288 (494)
+..++|+|||+++++++ .+..+.+||..+++....+..+.... ...+.+ ++++.+++.+ .
T Consensus 91 ~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~------~ 163 (346)
T d1jmxb_ 91 MYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRA-ADDGSLYVAG------P 163 (346)
T ss_dssp SSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEE-CTTSCEEEES------S
T ss_pred eEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeeeccCceEEEEe-cCCCEEEEeC------C
Confidence 56899999999988765 47889999998877544443332211 222333 3334444432 1
Q ss_pred eEEEEeCC-------------------------------------------------------------------CCCCc
Q psy14130 289 QVGLWDEN-------------------------------------------------------------------DLNTP 301 (494)
Q Consensus 289 ~i~iwd~~-------------------------------------------------------------------~~~~~ 301 (494)
.+.+||+. +....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (346)
T d1jmxb_ 164 DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTH 243 (346)
T ss_dssp SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEE
T ss_pred cceEEEccCCCEEEEEecCCCccceEEeccccEEEEEecCCCceEeeeeeeeeccCceeEeeccCCceEEEEECCCCceE
Confidence 23444432 21111
Q ss_pred eeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeE
Q psy14130 302 LALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFR 379 (494)
Q Consensus 302 ~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~ 379 (494)
......+...+....+++++..+ +.+ .++.|.+||..+++.+... ..+..+.+++|+|||..++++ ++.++
T Consensus 244 -~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~v~v~d~~~~~~~~~~----~~~~~~~~va~s~DG~~l~v~~~d~~v~ 316 (346)
T d1jmxb_ 244 -TQEFADLTELYFTGLRSPKDPNQ-IYG-VLNRLAKYDLKQRKLIKAA----NLDHTYYCVAFDKKGDKLYLGGTFNDLA 316 (346)
T ss_dssp -EEEEEECSSCEEEEEECSSCTTE-EEE-EESEEEEEETTTTEEEEEE----ECSSCCCEEEECSSSSCEEEESBSSEEE
T ss_pred -EEEeecccceeEEEEEeCCCCEE-EEe-cCCeEEEEECCCCcEEEEE----cCCCCEEEEEEcCCCCEEEEEeCCCcEE
Confidence 11112234456667888888877 444 3467999999998764333 234569999999999887764 89999
Q ss_pred EEEeeC
Q psy14130 380 FFKLHT 385 (494)
Q Consensus 380 ~~~l~~ 385 (494)
+|++.+
T Consensus 317 v~D~~t 322 (346)
T d1jmxb_ 317 VFNPDT 322 (346)
T ss_dssp EEETTT
T ss_pred EEECcc
Confidence 999987
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.68 E-value=2e-14 Score=133.56 Aligned_cols=185 Identities=13% Similarity=0.099 Sum_probs=124.8
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEe-CCCeEEEEECCCCeEEEE------ecCCCCce
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAG-FDYLIILWDVGKGEALTV------IDCHPDVI 222 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s-~d~~v~iwd~~~~~~~~~------~~~h~~~v 222 (494)
.|.+|+...... ........+...+.++.++|++ +.++.++ .+..|.+|+......... ........
T Consensus 106 ~v~~~~~~~~~~-----~~~~~~~~~~~~~~~v~~s~d~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~p 179 (333)
T d1ri6a_ 106 NVSVTRLEDGLP-----VGVVDVVEGLDGCHSANISPDN-RTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGP 179 (333)
T ss_dssp EEEEEEEETTEE-----EEEEEEECCCTTBCCCEECTTS-SEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCE
T ss_pred ceeeeccccccc-----eecccccCCCccceEEEeeecc-eeeeccccccceeeEEEeccCCcceeeeceeeeeecCCCc
Confidence 578888766522 2223344567778899999998 4555554 556899999876532211 12345667
Q ss_pred EEEEEcCCCCEEEEEe-CCCeEEEEeCCCCc----eEEEeeec-----CCCCceEEEEECCCCeEEEEEecCCCCceEEE
Q psy14130 223 NCLSFNRDGSRLVTTC-KDKTVRVLDPRTGL----VISQGVCH-----PGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGL 292 (494)
Q Consensus 223 ~~l~~~~~~~~l~s~~-~d~~v~iwd~~~~~----~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~i 292 (494)
..++|++++..++... ..+...+|+..... ........ .......+.+++++..+++++ ..++.+.+
T Consensus 180 ~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~~~~~---~~~~~~~~ 256 (333)
T d1ri6a_ 180 RHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACD---RTASLITV 256 (333)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEE---TTTTEEEE
T ss_pred cEEEEeccceeEEeeccccCceEEEeecccccceeeeeeeeeeecCCCccccceeEEEecccCceeeec---ccCCeEEE
Confidence 8999999998877665 56678888765433 11222111 111256678899988888888 78899999
Q ss_pred EeCCCCCCceeEee-ecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCC
Q psy14130 293 WDENDLNTPLALET-VDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNE 343 (494)
Q Consensus 293 wd~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~ 343 (494)
|++........... ......+..++|+|||++|++++..++.|++|++...
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~p~~~a~spDGk~l~va~~~~~~v~v~~id~~ 308 (333)
T d1ri6a_ 257 FSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGE 308 (333)
T ss_dssp EEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETT
T ss_pred EEEcCCCCEEEEEEEeCCCCCeeEEEEeCCCCEEEEEECCCCeEEEEEEECC
Confidence 99876544433332 2344567789999999999888888899999977543
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.68 E-value=3.3e-15 Score=139.47 Aligned_cols=297 Identities=10% Similarity=-0.016 Sum_probs=166.0
Q ss_pred EEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEEecccccccc
Q psy14130 12 IKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRFRGVR 91 (494)
Q Consensus 12 v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~ 91 (494)
++|++ ++++|++++.|++|. +|+....+.. ..+++... ....-++.++++..+......++.+.++.+.....+.
T Consensus 2 ~a~~~-~~~~l~~~~~~~~v~-v~D~~t~~~~--~t~~~~~~-~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~ 76 (346)
T d1jmxb_ 2 PALKA-GHEYMIVTNYPNNLH-VVDVASDTVY--KSCVMPDK-FGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTF 76 (346)
T ss_dssp CCCCT-TCEEEEEEETTTEEE-EEETTTTEEE--EEEECSSC-CSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred ccCCC-CCcEEEEEcCCCEEE-EEECCCCCEE--EEEEcCCC-CCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeee
Confidence 57899 899999999999998 8887654432 22221111 0111233344443333334445556555443211100
Q ss_pred CCCCceeecccCCccceeeceeccCCccCCCeeeeCCc--eEEEEEee-cCCcEEEEEEcCcEEEEEcCCCCCCCCcccc
Q psy14130 92 SSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPK--FVAVVTEV-AGGGAFLVLPIHRVKLWYIPDGGLSGNLNEW 168 (494)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~g~~~~~~~~~v~iw~~~~~~~~~~~~~~ 168 (494)
. ......... .......+.++|+ .+.+.... .............+.+|+..++.... .
T Consensus 77 ~------~~~~~~~~~---------~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~----~ 137 (346)
T d1jmxb_ 77 H------ANLSSVPGE---------VGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAK----P 137 (346)
T ss_dssp E------EESCCSTTE---------EEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBC----C
T ss_pred e------ecccccccc---------cCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeee----E
Confidence 0 000000000 0000111222221 11111110 00011122233458999988773321 1
Q ss_pred eEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCC----------------
Q psy14130 169 IMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGS---------------- 232 (494)
Q Consensus 169 ~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~---------------- 232 (494)
+... .....+..+.+++++ .+++++ +.+.+||+.+++.+..+..+. ....+.++|++.
T Consensus 138 ~~~~-~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (346)
T d1jmxb_ 138 VRTF-PMPRQVYLMRAADDG-SLYVAG---PDIYKMDVKTGKYTVALPLRN-WNRKGYSAPDVLYFWPHQSPRHEFSMLY 211 (346)
T ss_dssp SEEE-ECCSSCCCEEECTTS-CEEEES---SSEEEECTTTCCEEEEECSTT-CCCTTBCCCBCCCCCCCCCTTCEEEEEE
T ss_pred EEee-eccCceEEEEecCCC-EEEEeC---CcceEEEccCCCEEEEEecCC-CccceEEeccccEEEEEecCCCceEeee
Confidence 1111 123445667777776 455542 458999999998888876442 233334444433
Q ss_pred ----------EEEEEeCCCeEEEEeCCCCceEEEe-eecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCc
Q psy14130 233 ----------RLVTTCKDKTVRVLDPRTGLVISQG-VCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTP 301 (494)
Q Consensus 233 ----------~l~s~~~d~~v~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~ 301 (494)
.++++..+..+.+||..++...... ..+... +..+.+++++..++..+ ++.|.+||..+.+.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~v~v~d~~~~~~- 284 (346)
T d1jmxb_ 212 TIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTEL-YFTGLRSPKDPNQIYGV-----LNRLAKYDLKQRKL- 284 (346)
T ss_dssp EEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSC-EEEEEECSSCTTEEEEE-----ESEEEEEETTTTEE-
T ss_pred eeeeeccCceeEeeccCCceEEEEECCCCceEEEEeecccce-eEEEEEeCCCCEEEEec-----CCeEEEEECCCCcE-
Confidence 2334455667889999988855544 445544 78888888877776655 56899999987543
Q ss_pred eeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEE
Q psy14130 302 LALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIH 348 (494)
Q Consensus 302 ~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~ 348 (494)
.........+.+++|+|||++| ++++.|+.|++||+++++.+..
T Consensus 285 --~~~~~~~~~~~~va~s~DG~~l-~v~~~d~~v~v~D~~t~~~i~~ 328 (346)
T d1jmxb_ 285 --IKAANLDHTYYCVAFDKKGDKL-YLGGTFNDLAVFNPDTLEKVKN 328 (346)
T ss_dssp --EEEEECSSCCCEEEECSSSSCE-EEESBSSEEEEEETTTTEEEEE
T ss_pred --EEEEcCCCCEEEEEEcCCCCEE-EEEeCCCcEEEEECccCCEEEE
Confidence 2233345578899999999999 6677899999999999887544
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.64 E-value=1.2e-12 Score=123.70 Aligned_cols=201 Identities=12% Similarity=-0.003 Sum_probs=130.5
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCC------CCce
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCH------PDVI 222 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h------~~~v 222 (494)
+.+.+|+.... + ...+.....++.++|++...+++.+.|+.+.+||...+........+ ....
T Consensus 148 ~~~~~~~~~~~-------~----~~~~~~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (373)
T d2madh_ 148 PAVGLVVQGGS-------S----DDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLT 216 (373)
T ss_pred CceEEeeccCC-------e----EEEEeccceeEEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEEeeeccccCcccee
Confidence 35777776655 1 22344557789999999778889999999999999988766654422 2223
Q ss_pred EEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEe--eecCC---------CCceEEEEECCCCeEEEEEe------cCC
Q psy14130 223 NCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQG--VCHPG---------TRSSKAVFIGDTGRIVTTGF------SRH 285 (494)
Q Consensus 223 ~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~--~~~~~---------~~~~~~~~~~~~~~l~~~g~------~~~ 285 (494)
..+.+.+++. ++..+.++.+.+|+...+...... ..+.. .....+.+++++..++.... ...
T Consensus 217 ~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 295 (373)
T d2madh_ 217 QPAQANKSGR-IVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHA 295 (373)
T ss_pred eeEEECCCce-EEEecCCceEEEEEcCCCeEEEEEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeec
Confidence 4556666654 455667889999998877532221 11111 01233455555444332210 004
Q ss_pred CCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCE-EEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEE
Q psy14130 286 SDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRI-LFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGF 364 (494)
Q Consensus 286 ~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~ 364 (494)
.++.+.+||..+.+.. ..+.+...+..++|+|||+. |+++++.|+.|++||+.+++.+..+ ..+ +.....+++
T Consensus 296 ~~~~v~~~d~~t~~~~---~~~~~~~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~~~~-~~~--g~~P~~l~~ 369 (373)
T d2madh_ 296 AAKEVTSVTGLVGQTS---SQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST-VEL--GSGPQVLSV 369 (373)
T ss_pred CCCeEEEEECCCCcEE---EEecCCCCeeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEE-CCC--CCCCcEEEE
Confidence 6788999999876543 33445677889999999986 4678999999999999999875443 222 344666666
Q ss_pred ecC
Q psy14130 365 MPK 367 (494)
Q Consensus 365 ~p~ 367 (494)
.++
T Consensus 370 ~~~ 372 (373)
T d2madh_ 370 MNE 372 (373)
T ss_pred ecC
Confidence 543
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.58 E-value=1.1e-12 Score=123.96 Aligned_cols=216 Identities=7% Similarity=-0.078 Sum_probs=146.5
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEe----------CCCeEEEEECCCCeEEEEecCCC
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAG----------FDYLIILWDVGKGEALTVIDCHP 219 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s----------~d~~v~iwd~~~~~~~~~~~~h~ 219 (494)
+|.+||..++ +.+.++.++... .++|+|+| ++|++++ .++.|.+||+.+++.+..+..+.
T Consensus 48 ~v~v~D~~tg-------~~~~~~~~~~~~--~~a~SpDG-~~l~va~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~ 117 (373)
T d2madh_ 48 QQWVLDAGSG-------SILGHVNGGFLP--NPVAAHSG-SEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPD 117 (373)
T ss_pred eEEEEECCCC-------CEEEEEeCCCCc--cEEEcCCC-CEEEEEeecCCcccccccceEEEEEECCCCcEEEEEecCC
Confidence 5899999888 555666655543 79999999 5676654 46789999999999988887665
Q ss_pred Cce-------EEEEEcCCCCEEEEEe--CCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceE
Q psy14130 220 DVI-------NCLSFNRDGSRLVTTC--KDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQV 290 (494)
Q Consensus 220 ~~v-------~~l~~~~~~~~l~s~~--~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i 290 (494)
... ..+.|+++++.++... .++.+.+|+....+....... ...+.+++++..++++. +.|+.+
T Consensus 118 ~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~s~~g~~~~v~~---~~dg~~ 189 (373)
T d2madh_ 118 APRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSDDQLLSS-----PTCYHIHPGAPSTFYLL---CAQGGL 189 (373)
T ss_pred cceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccCCeEEEEecc-----ceeEEEecCCCcEEEEE---cCCCeE
Confidence 443 4578889988766554 467889999887765444322 45677888877777777 688889
Q ss_pred EEEeCCCCCCceeEe---------------------------------eecC------------------------CCce
Q psy14130 291 GLWDENDLNTPLALE---------------------------------TVDS------------------------SSGV 313 (494)
Q Consensus 291 ~iwd~~~~~~~~~~~---------------------------------~~~~------------------------~~~v 313 (494)
.+||........... .... ....
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (373)
T d2madh_ 190 AKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGW 269 (373)
T ss_pred EEEEcCCceeeEEEeeeccccCccceeeeEEECCCceEEEecCCceEEEEEcCCCeEEEEEeeccccCcEEeeeeccCcc
Confidence 888865422111000 0000 0011
Q ss_pred EEeEEeCCCCEEE---------EEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCce--eee--ccceeEE
Q psy14130 314 LFPYYDHDTRILF---------LAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGC--DVT--QCEIFRF 380 (494)
Q Consensus 314 ~~~~~~~~~~~l~---------~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~--~~~--~~~~~~~ 380 (494)
..+++++++..++ ++...++.|.+||..+++.+..+ ..+..+.+++|+|||.. +++ .++.+++
T Consensus 270 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~----~~~~~~~~~a~spDG~~~l~vt~~~d~~v~v 345 (373)
T d2madh_ 270 QQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQI----SLGHDVDAISVAQDGGPDLYALSAGTEVLHI 345 (373)
T ss_pred eeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECCCCcEEEEe----cCCCCeeEEEECCCCCEEEEEEeCCCCeEEE
Confidence 2345666666553 34456678999999998865433 33567899999999873 344 3889999
Q ss_pred EEeeCCC
Q psy14130 381 FKLHTTR 387 (494)
Q Consensus 381 ~~l~~~~ 387 (494)
|++.+++
T Consensus 346 ~D~~tg~ 352 (373)
T d2madh_ 346 YDAGAGD 352 (373)
T ss_pred EECCCCC
Confidence 9998843
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.56 E-value=6.8e-13 Score=124.29 Aligned_cols=220 Identities=10% Similarity=-0.022 Sum_probs=146.2
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEE---------EeCCCeEEEEECCCCeEEEEecCCC-
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVAS---------AGFDYLIILWDVGKGEALTVIDCHP- 219 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s---------~s~d~~v~iwd~~~~~~~~~~~~h~- 219 (494)
+|.+||..++ +.+.++..+... .++|+|+|..++++ ++.|+.|++||+.+++.+..+..+.
T Consensus 29 ~v~v~D~~tg-------~~~~~~~~g~~~--~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~~~~~~~ 99 (355)
T d2bbkh_ 29 QQFVIDGEAG-------RVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDA 99 (355)
T ss_dssp EEEEEETTTT-------EEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTC
T ss_pred eEEEEECCCC-------cEEEEEECCCCC--ceEEcCCCCEEEEEeCCCccccccCCCCEEEEEECCCCCEEEEEecCCc
Confidence 5999999988 556666555444 79999999534333 2347899999999999887765332
Q ss_pred ------CceEEEEEcCCCCEEEEEe--CCCeEEEEeCCCCceEEEeeecCCC------C---------------------
Q psy14130 220 ------DVINCLSFNRDGSRLVTTC--KDKTVRVLDPRTGLVISQGVCHPGT------R--------------------- 264 (494)
Q Consensus 220 ------~~v~~l~~~~~~~~l~s~~--~d~~v~iwd~~~~~~~~~~~~~~~~------~--------------------- 264 (494)
.....++|++++++++.++ .+..+.+||..+++.+..+..+... .
T Consensus 100 ~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~v~~~~~~ 179 (355)
T d2bbkh_ 100 PRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEG 179 (355)
T ss_dssp CCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSS
T ss_pred ceeecCCCCceEEEecCCCeeEEecCCCCceeeeeecCCCcEeeEEecCCcceEeecCCcceEEEcCCCCEEEEEecCCC
Confidence 2345689999999888765 4678999999988866554322110 0
Q ss_pred -----------------ceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecC----------CCceEEeE
Q psy14130 265 -----------------SSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDS----------SSGVLFPY 317 (494)
Q Consensus 265 -----------------~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~----------~~~v~~~~ 317 (494)
+....+.+++..++.++ .++.+++|++.............+ ..+...++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 255 (355)
T d2bbkh_ 180 TPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPT----YTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVA 255 (355)
T ss_dssp CCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEB----TTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEE
T ss_pred eEEEEecccccceecceeeeccccCCCCeEEEec----CCCeEEEEecCCCcEEEEeccCCcccceEeeeeeccceEEEE
Confidence 11123344434444433 788999999876443211110000 12234578
Q ss_pred EeCCCCEEEEEEeCC---------CcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCc--eeeec--cceeEEEEee
Q psy14130 318 YDHDTRILFLAGKGD---------GNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRG--CDVTQ--CEIFRFFKLH 384 (494)
Q Consensus 318 ~~~~~~~l~~~g~~d---------g~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~--~~~~~--~~~~~~~~l~ 384 (494)
+++++..++++.... ..|.+||..+++.+..+. .+..+.+++|+|||. +++++ ++.+++|++.
T Consensus 256 ~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~----~~~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~ 331 (355)
T d2bbkh_ 256 YHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFE----MGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAE 331 (355)
T ss_dssp EETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEE----EEEEECEEEECCSSSCEEEEEETTTTEEEEEETT
T ss_pred EeCCCCeEEEEeccCCceeecCCCCeEEEEeCCCCcEEEEec----CCCCEEEEEEcCCCCeEEEEEECCCCEEEEEECC
Confidence 999999997665433 469999999988654332 234588999999987 34443 7899999998
Q ss_pred CC
Q psy14130 385 TT 386 (494)
Q Consensus 385 ~~ 386 (494)
++
T Consensus 332 tg 333 (355)
T d2bbkh_ 332 SG 333 (355)
T ss_dssp TC
T ss_pred CC
Confidence 84
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.49 E-value=2e-13 Score=128.00 Aligned_cols=184 Identities=11% Similarity=0.020 Sum_probs=114.9
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccc-------cEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCce
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKR-------RVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVI 222 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~-------~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v 222 (494)
.+.+|+..++ +.+..+..+.. ....+.+++++..+++....++.+.+++..... ..+...+
T Consensus 130 ~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~-----~~~~~~~ 197 (355)
T d2bbkh_ 130 AVGVVDLEGK-------AFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFH-----PEDEFLI 197 (355)
T ss_dssp EEEEEETTTT-------EEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCS-----CTTSCBC
T ss_pred eeeeeecCCC-------cEeeEEecCCcceEeecCCcceEEEcCCCCEEEEEecCCCeEEEEeccccc-----ceeccee
Confidence 5888998887 33333332221 122344555543223333333444444443322 1244456
Q ss_pred EEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEE--EeeecC----------CCCceEEEEECCCCeEEEEEecC------
Q psy14130 223 NCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVIS--QGVCHP----------GTRSSKAVFIGDTGRIVTTGFSR------ 284 (494)
Q Consensus 223 ~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~--~~~~~~----------~~~~~~~~~~~~~~~l~~~g~~~------ 284 (494)
....+.+++..++.++.++.+.+|++..++... ....+. .. ...+.+++++..+++.....
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~d~~~~~~~~~~~~~~~~~ 276 (355)
T d2bbkh_ 198 NHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGG-WQQVAYHRALDRIYLLVDQRDEWRHK 276 (355)
T ss_dssp SCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECS-SSCEEEETTTTEEEEEEEECCTTCTT
T ss_pred eeccccCCCCeEEEecCCCeEEEEecCCCcEEEEeccCCcccceEeeeeeccc-eEEEEEeCCCCeEEEEeccCCceeec
Confidence 667888889999999999999999998876321 122111 11 34578888877776665211
Q ss_pred CCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCE-EEEEEeCCCcEEEEEeeCCCceEEe
Q psy14130 285 HSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRI-LFLAGKGDGNIRYYELTNERPYIHF 349 (494)
Q Consensus 285 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~g~~dg~i~~wd~~~~~~~~~~ 349 (494)
.....|.+||..+.+.... +.....+.+++|+|||+. ++++++.|+.|++||+++++.+..+
T Consensus 277 ~~~~~v~v~d~~t~~~~~~---~~~~~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~~~~~i 339 (355)
T d2bbkh_ 277 TASRFVVVLDAKTGERLAK---FEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSV 339 (355)
T ss_dssp SCEEEEEEEETTTCCEEEE---EEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred CCCCeEEEEeCCCCcEEEE---ecCCCCEEEEEEcCCCCeEEEEEECCCCEEEEEECCCCCEEEEE
Confidence 1235899999988654322 233456788999999984 6678888999999999999875443
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.39 E-value=8.1e-12 Score=117.79 Aligned_cols=222 Identities=7% Similarity=-0.090 Sum_probs=137.3
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEe----------CCCeEEEEECCCCeEEEEecCCC
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAG----------FDYLIILWDVGKGEALTVIDCHP 219 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s----------~d~~v~iwd~~~~~~~~~~~~h~ 219 (494)
.|.+||..++ +.+..+.++... .++|+|+| +.|+.++ .|+.|.+||..+++++..+..+.
T Consensus 47 ~~~~~d~~~~-------~~~~~~~~~~~~--~~a~spDg-~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~ 116 (368)
T d1mdah_ 47 ENWVSCAGCG-------VTLGHSLGAFLS--LAVAGHSG-SDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPD 116 (368)
T ss_dssp EEEEEETTTT-------EEEEEEEECTTC--EEEECTTS-SCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETT
T ss_pred eEEEEeCCCC-------cEEEEEeCCCCC--cceECCCC-CEEEEEcccCccccccccCCeEEEEECCCCcEeeeecCCc
Confidence 4777788877 566666666554 58999999 4555543 47789999999999888775432
Q ss_pred C-------ceEEEEEcCCCCEEEEEe-CCCeEEEEeCCCCceEEEeeecCCCC------ceEEEEECCCCeEEEEEec--
Q psy14130 220 D-------VINCLSFNRDGSRLVTTC-KDKTVRVLDPRTGLVISQGVCHPGTR------SSKAVFIGDTGRIVTTGFS-- 283 (494)
Q Consensus 220 ~-------~v~~l~~~~~~~~l~s~~-~d~~v~iwd~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~~g~~-- 283 (494)
. ....++|+|||++|+++. .++.+.+||+.+++.+..+..+.... ...+.+++++..++.....
T Consensus 117 ~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~Dg~~~~~~~~~~~ 196 (368)
T d1mdah_ 117 APRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAP 196 (368)
T ss_dssp SCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSC
T ss_pred cceecccCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcEeEEeeccCcceEccCCCceEEEEcCCCCEEEEEecCCc
Confidence 2 234689999999998776 57999999999999888776554321 1112222332211111100
Q ss_pred ------------------------------CCCCceEEEEeCCCCCCceeEeeecC-----------CCceEEeEEeCCC
Q psy14130 284 ------------------------------RHSDRQVGLWDENDLNTPLALETVDS-----------SSGVLFPYYDHDT 322 (494)
Q Consensus 284 ------------------------------~~~d~~i~iwd~~~~~~~~~~~~~~~-----------~~~v~~~~~~~~~ 322 (494)
....+.+.+++...... ........ ..+...+++++++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~ 275 (368)
T d1mdah_ 197 AAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGA-TMKAAIDGNESGRKADNFRSAGFQMVAKLKNT 275 (368)
T ss_dssp CCCEECCCCSCTTSCBCSCCEEETTTTEEEECBSSCCEEEECCSSCC-EEECCCCSSCTHHHHTTEEECSSSCEEEETTT
T ss_pred eeeeeeecccccccccceeecccccCcEEEEecCCCEEEEeecCCce-EEEeecccccceeeeeeecCCCceeEEEcCCC
Confidence 00122233333322111 00000000 0112347889999
Q ss_pred CEEEEEEeCC--------CcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCc--eeee--ccceeEEEEeeCC
Q psy14130 323 RILFLAGKGD--------GNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRG--CDVT--QCEIFRFFKLHTT 386 (494)
Q Consensus 323 ~~l~~~g~~d--------g~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~--~~~~--~~~~~~~~~l~~~ 386 (494)
..+|++...+ ..|.+||..+++.+..+ ..+..+.+++|+||+. ++++ .++.+++|+..++
T Consensus 276 ~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~----~~~~~~~~~a~spDG~~~ly~s~~~~~~v~v~D~~tg 347 (368)
T d1mdah_ 276 DGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPI----SNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASD 347 (368)
T ss_dssp TEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECC----EEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSC
T ss_pred CEEEEEecCCCceeecCCceEEEEECCCCcEeEEe----cCCCceeEEEECCCCCEEEEEEeCCCCeEEEEECCCC
Confidence 9887765443 35889999999864332 2245688999999986 3344 3789999998873
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=99.28 E-value=8.5e-11 Score=110.80 Aligned_cols=213 Identities=9% Similarity=-0.020 Sum_probs=143.6
Q ss_pred CcEEEEEcCCCCCCCCcccceEecc-cccccEEEEEEcCCCCCEEEEEeCCCe------------------EEEEECCCC
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLH-GHKRRVGYIEWHPTAENVVASAGFDYL------------------IILWDVGKG 209 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~-~h~~~V~~~~~~p~~~~~l~s~s~d~~------------------v~iwd~~~~ 209 (494)
++|.++|+.+. +....+. .+...+..++|+|++....+++..+.. +..+|..+.
T Consensus 94 ~rVavIDl~t~-------k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~ 166 (441)
T d1qnia2 94 TRVARIRLDIM-------KTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETM 166 (441)
T ss_dssp TEEEEEETTTT-------EEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTC
T ss_pred CEEEEEECCCC-------cEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCccc
Confidence 46999999987 3333332 356788999999998543444433333 355888888
Q ss_pred eEEEEecCCCCceEEEEEcCCCCEEEEEeCC-----------------------------------------CeEEEEeC
Q psy14130 210 EALTVIDCHPDVINCLSFNRDGSRLVTTCKD-----------------------------------------KTVRVLDP 248 (494)
Q Consensus 210 ~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d-----------------------------------------~~v~iwd~ 248 (494)
+...++.. .+....+.|+|+|+++++++.+ +.+.+++.
T Consensus 167 ~v~~qI~v-~~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~dGk~~~v~~~~v~vvd~~ 245 (441)
T d1qnia2 167 DVAWQVIV-DGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGDSKVPVVDGR 245 (441)
T ss_dssp SEEEEEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECS
T ss_pred eeeEEEec-CCCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEEecCCCEEEeCCCCcEEEEcc
Confidence 77776653 3457889999999999887643 34455555
Q ss_pred CCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCC---------ceeEeeecCCCceEEeEEe
Q psy14130 249 RTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNT---------PLALETVDSSSGVLFPYYD 319 (494)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~---------~~~~~~~~~~~~v~~~~~~ 319 (494)
...+.+..+..... ...+.++|++.+++++| ..+++|.+||+++... ..........-+.....|+
T Consensus 246 ~~~~v~~~IPvgks--PhGv~vSPDGkyl~~~~---~~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~~~~glgplh~~fd 320 (441)
T d1qnia2 246 GESEFTRYIPVPKN--PHGLNTSPDGKYFIANG---KLSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTFD 320 (441)
T ss_dssp SSCSSEEEECCBSS--CCCEEECTTSCEEEEEC---TTSSBEEEEEGGGHHHHTTTSSCGGGGEEECCBCCSCEEEEEEC
T ss_pred cCCceEEEEeCCCC--ccCceECCCCCEEEEeC---CcCCcEEEEEeehhhhHhhccCCcceEEEeecccccCcccceec
Confidence 55556666666554 57889999988899999 8999999999864221 0111112233456667999
Q ss_pred CCCCEEEEEEeCCCcEEEEEeeC---------CCceEEeccc---ccCCCCeeEEEEecCCceeeecc
Q psy14130 320 HDTRILFLAGKGDGNIRYYELTN---------ERPYIHFLNQ---SLSGAPQRGLGFMPKRGCDVTQC 375 (494)
Q Consensus 320 ~~~~~l~~~g~~dg~i~~wd~~~---------~~~~~~~~~~---~~~~~~v~~~~~~p~~~~~~~~~ 375 (494)
++|..+ .+...|..|..|++.. ..++...+.. ..|...+.+.+++|||.++++.+
T Consensus 321 ~~g~~y-ts~~~ds~v~kw~~~~~~~~~~~~~~~~v~~~~~v~y~~GH~~~~~~~t~~pdGk~l~s~~ 387 (441)
T d1qnia2 321 GRGNAY-TTLFIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDADGKWLVVLS 387 (441)
T ss_dssp SSSEEE-EEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCCCEEEEEE
T ss_pred CCceEE-EcccccceEEEeccchhhhhhccCCCceeEeccccccCCCCCccccccccCCCCcEEEecC
Confidence 998655 8999999999999852 1222222211 12344567778999999999864
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=99.27 E-value=7.1e-10 Score=104.43 Aligned_cols=205 Identities=7% Similarity=-0.038 Sum_probs=137.4
Q ss_pred ccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEec-CCCCceEEEEEcCCCC--EEEEEeCCC----------
Q psy14130 175 HKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVID-CHPDVINCLSFNRDGS--RLVTTCKDK---------- 241 (494)
Q Consensus 175 h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~h~~~v~~l~~~~~~~--~l~s~~~d~---------- 241 (494)
|........++|+|..++++...+..|.++|+.+.+....+. .+...+..++|+|+|+ +++..+.+.
T Consensus 70 hhP~~s~t~gtpDGr~lfV~d~~~~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~ 149 (441)
T d1qnia2 70 HHPHISMTDGRYDGKYLFINDKANTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDF 149 (441)
T ss_dssp CCCEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCC
T ss_pred cCCCcceecccCCCCEEEEEcCCCCEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCccccc
Confidence 445556666789995445666788999999999998877665 3677899999999998 444444332
Q ss_pred -------eEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCC-----------------------------
Q psy14130 242 -------TVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRH----------------------------- 285 (494)
Q Consensus 242 -------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~----------------------------- 285 (494)
.+..+|..+.+...++..... ...+.++|+++.++++.+...
T Consensus 150 ~~~~~~~~~~~iD~~t~~v~~qI~v~~~--p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~ 227 (441)
T d1qnia2 150 SLDNSYTMFTAIDAETMDVAWQVIVDGN--LDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVK 227 (441)
T ss_dssp CGGGEEEEEEEEETTTCSEEEEEEESSC--CCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHH
T ss_pred ccccccceEEeecCccceeeEEEecCCC--ccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEEec
Confidence 245689998888777766543 588999999888887764210
Q ss_pred --------CCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCce--------EEe
Q psy14130 286 --------SDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPY--------IHF 349 (494)
Q Consensus 286 --------~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~--------~~~ 349 (494)
.++.+.+++...... ...+........+.++|||++++++|..+++|.+||+.+-+.. ...
T Consensus 228 dGk~~~v~~~~v~vvd~~~~~~v---~~~IPvgksPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~ 304 (441)
T d1qnia2 228 AGNFKTIGDSKVPVVDGRGESEF---TRYIPVPKNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTI 304 (441)
T ss_dssp TTCCBCCTTCCCCEEECSSSCSS---EEEECCBSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGE
T ss_pred CCCEEEeCCCCcEEEEcccCCce---EEEEeCCCCccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccCCcceEE
Confidence 123334443332211 2223344456778999999999999999999999998753210 000
Q ss_pred cccccCCCCeeEEEEecCCceeeec--cceeEEEEee
Q psy14130 350 LNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLH 384 (494)
Q Consensus 350 ~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~ 384 (494)
..+...+-.....+|.++|....+. |..+..|++.
T Consensus 305 ~~~~~~glgplh~~fd~~g~~yts~~~ds~v~kw~~~ 341 (441)
T d1qnia2 305 VAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIA 341 (441)
T ss_dssp EECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHH
T ss_pred EeecccccCcccceecCCceEEEcccccceEEEeccc
Confidence 0111111223446899998776663 8999999985
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.23 E-value=1.1e-10 Score=109.95 Aligned_cols=188 Identities=8% Similarity=-0.078 Sum_probs=112.9
Q ss_pred cEEEEEcCCCCCCCCcccceEeccccc-------ccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCc-
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHK-------RRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDV- 221 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~-------~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~- 221 (494)
.|.+||..++ +++..+..+. .....++|+|+|..++++...++.+.+||+.+++.+..+..+...
T Consensus 97 ~v~v~D~~t~-------~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~~~~~~~~~~ 169 (368)
T d1mdah_ 97 YVEVFDPVTF-------LPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFH 169 (368)
T ss_dssp EEEEECTTTC-------CEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCC
T ss_pred eEEEEECCCC-------cEeeeecCCccceecccCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcEeEEeeccCcce
Confidence 5999999888 3333333221 122468999999544455456899999999999887776543321
Q ss_pred ------eEEEEEcCCCCEEEEEeC------------------------------------CCeEEEEeCCCCceEEEe--
Q psy14130 222 ------INCLSFNRDGSRLVTTCK------------------------------------DKTVRVLDPRTGLVISQG-- 257 (494)
Q Consensus 222 ------v~~l~~~~~~~~l~s~~~------------------------------------d~~v~iwd~~~~~~~~~~-- 257 (494)
...+.+++||+.++.... ++.+.+++...+......
T Consensus 170 ~~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~ 249 (368)
T d1mdah_ 170 IHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAI 249 (368)
T ss_dssp CEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBSSCCEEEECCSSCCEEECCC
T ss_pred EccCCCceEEEEcCCCCEEEEEecCCceeeeeeecccccccccceeecccccCcEEEEecCCCEEEEeecCCceEEEeec
Confidence 122444445444333221 223344444433322111
Q ss_pred eecCC---------CCceEEEEECCCCeEEEEEecC-----CCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCC
Q psy14130 258 VCHPG---------TRSSKAVFIGDTGRIVTTGFSR-----HSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTR 323 (494)
Q Consensus 258 ~~~~~---------~~~~~~~~~~~~~~l~~~g~~~-----~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 323 (494)
..+.. .....++++++++.++++.... .....|.+||..+.+.. ..+.....+..++|+|||+
T Consensus 250 ~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~---~~~~~~~~~~~~a~spDG~ 326 (368)
T d1mdah_ 250 DGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTS---GPISNGHDSDAIIAAQDGA 326 (368)
T ss_dssp CSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEE---ECCEEEEEECEEEECCSSS
T ss_pred ccccceeeeeeecCCCceeEEEcCCCCEEEEEecCCCceeecCCceEEEEECCCCcEe---EEecCCCceeEEEECCCCC
Confidence 00000 0123567888877776654211 11246999999876542 2223345678899999997
Q ss_pred -EEEEEEeCCCcEEEEEeeCCCceE
Q psy14130 324 -ILFLAGKGDGNIRYYELTNERPYI 347 (494)
Q Consensus 324 -~l~~~g~~dg~i~~wd~~~~~~~~ 347 (494)
.+|+++..|+.|++||..+++.+.
T Consensus 327 ~~ly~s~~~~~~v~v~D~~tgk~~~ 351 (368)
T d1mdah_ 327 SDNYANSAGTEVLDIYDAASDQDQS 351 (368)
T ss_dssp CEEEEEETTTTEEEEEESSSCEEEE
T ss_pred EEEEEEeCCCCeEEEEECCCCCEEE
Confidence 577888899999999999998743
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=99.13 E-value=5.1e-08 Score=90.92 Aligned_cols=166 Identities=8% Similarity=-0.023 Sum_probs=106.1
Q ss_pred cEEEEEEcCCCCCEEEEEe-CCCeEEEEECCCC-eE--EEEe--cCCCCceEEEEEcCCCCEEEEEe-CCCeEEEEeCCC
Q psy14130 178 RVGYIEWHPTAENVVASAG-FDYLIILWDVGKG-EA--LTVI--DCHPDVINCLSFNRDGSRLVTTC-KDKTVRVLDPRT 250 (494)
Q Consensus 178 ~V~~~~~~p~~~~~l~s~s-~d~~v~iwd~~~~-~~--~~~~--~~h~~~v~~l~~~~~~~~l~s~~-~d~~v~iwd~~~ 250 (494)
.+.++.|+|+| ++++++. ....|.+|+.... .. .... .........++|+|++++++... .+++|.+||+..
T Consensus 146 h~h~v~~sPdG-~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~ 224 (365)
T d1jofa_ 146 GIHGMVFDPTE-TYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDP 224 (365)
T ss_dssp CEEEEEECTTS-SEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred cceEEEECCCC-CEEEEeeCCCCEEEEEEccCCCceeeccceeecCCCCceEEEEECCCCceEEEeccCCCEEEEEEecC
Confidence 47899999999 5555554 4557888876543 22 2222 22456789999999999886655 689999999876
Q ss_pred CceE--EEeeec----------------CCCCceEEEEECCCCeEEEEEecC--CCCceEEEEeCCCCCCceeEee----
Q psy14130 251 GLVI--SQGVCH----------------PGTRSSKAVFIGDTGRIVTTGFSR--HSDRQVGLWDENDLNTPLALET---- 306 (494)
Q Consensus 251 ~~~~--~~~~~~----------------~~~~~~~~~~~~~~~~l~~~g~~~--~~d~~i~iwd~~~~~~~~~~~~---- 306 (494)
++.. ...... .......+.++|++..++++.... .....|..|++...........
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~ 304 (365)
T d1jofa_ 225 ATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPT 304 (365)
T ss_dssp TTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEEC
T ss_pred CCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecCCCceeeEeEeeEE
Confidence 6522 211100 001134678899977777765211 1123477777765333221111
Q ss_pred ecCCCceEEeEEeC-CCCEEEEEEeCCCcEEEEEeeCCC
Q psy14130 307 VDSSSGVLFPYYDH-DTRILFLAGKGDGNIRYYELTNER 344 (494)
Q Consensus 307 ~~~~~~v~~~~~~~-~~~~l~~~g~~dg~i~~wd~~~~~ 344 (494)
.........++++| +|++|++++..++.|.+|++....
T Consensus 305 ~~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~~~~ 343 (365)
T d1jofa_ 305 PTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDEF 343 (365)
T ss_dssp SSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETTE
T ss_pred EcCCCCccEEEecCCCCCEEEEEeCCCCeEEEEEEeCCc
Confidence 11234567788998 899998998999999999987654
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.07 E-value=8.4e-09 Score=100.02 Aligned_cols=227 Identities=8% Similarity=-0.004 Sum_probs=136.5
Q ss_pred cEEEEEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeC---------CCeEEEEECCCCeE
Q psy14130 141 GAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGF---------DYLIILWDVGKGEA 211 (494)
Q Consensus 141 g~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~---------d~~v~iwd~~~~~~ 211 (494)
+.++....+.+.+||+.++.....+ .-..+..|...|.++.|+|+| +.|+.++. ++.+.+||+.+++
T Consensus 28 ~~~~~~~~~~~~~~~~~t~~~~~~~--~~~~~~~~~~~i~~~~~SpDg-~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~- 103 (470)
T d2bgra1 28 HEYLYKQENNILVFNAEYGNSSVFL--ENSTFDEFGHSINDYSISPDG-QFILLEYNYVKQWRHSYTASYDIYDLNKRQ- 103 (470)
T ss_dssp SEEEEESSSCEEEEETTTCCEEEEE--CTTTTTTSSSCCCEEEECTTS-SEEEEEEEEEECSSSCEEEEEEEEETTTTE-
T ss_pred CEEEEEcCCcEEEEECCCCCEEEEE--chhhhhhccCccceeEECCCC-CEEEEEECCcceeeeccCceEEEEECCCCc-
Confidence 3444445567999999988432111 012456677889999999999 67777643 5688999999887
Q ss_pred EEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCC-----------------CCceEEEEECCC
Q psy14130 212 LTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPG-----------------TRSSKAVFIGDT 274 (494)
Q Consensus 212 ~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~ 274 (494)
+..+..|.+.+..+.|+|||+.||.. .++.+.+|+..+++..+....+.. .....+.|+|++
T Consensus 104 ~~~l~~~~~~~~~~~~SPDG~~ia~~-~~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDG 182 (470)
T d2bgra1 104 LITEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNG 182 (470)
T ss_dssp ECCSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTS
T ss_pred ccccccCCccccccccccCcceeeEe-ecccceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCccccEECCCC
Confidence 45677899999999999999999986 567899999998876554322211 113457799998
Q ss_pred CeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecc---
Q psy14130 275 GRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLN--- 351 (494)
Q Consensus 275 ~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~--- 351 (494)
..++...+ .+..+..|++....... ..........+...+. ...+..+.+|++..++.......
T Consensus 183 k~ia~~~~---d~~~v~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~-----~~~~~~~~v~~~~~~~~~~~~~~~~~ 249 (470)
T d2bgra1 183 TFLAYAQF---NDTEVPLIEYSFYSDES-----LQYPKTVRVPYPKAGA-----VNPTVKFFVVNTDSLSSVTNATSIQI 249 (470)
T ss_dssp SEEEEEEE---ECTTCCEEEEEECCSTT-----CSSCEEEEEECCBTTS-----CCCEEEEEEEEGGGCCSSSCCCEEEE
T ss_pred CccceeEe---cCCcCceEEEEeeccCC-----CCCCeeeeeccccccc-----cCCcceEEEEECCCcceeeecccccc
Confidence 88877774 33334444332110000 0111122222222221 12334678888887654211111
Q ss_pred -----cccCCCCeeEEEEecCCceeeec------cceeEEEEeeC
Q psy14130 352 -----QSLSGAPQRGLGFMPKRGCDVTQ------CEIFRFFKLHT 385 (494)
Q Consensus 352 -----~~~~~~~v~~~~~~p~~~~~~~~------~~~~~~~~l~~ 385 (494)
.......+..+.|.+++.+.+.. ...+.++.+..
T Consensus 250 ~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~~d~ 294 (470)
T d2bgra1 250 TAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDE 294 (470)
T ss_dssp CCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEET
T ss_pred CCccccCCCCceEEEEEEcCCCceeEEEeeccCCceEEEEEEecC
Confidence 01112335678899888765541 23445666554
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=99.01 E-value=1.9e-07 Score=86.86 Aligned_cols=163 Identities=9% Similarity=0.043 Sum_probs=107.0
Q ss_pred CceEEEEEcCCCCEEEEEeC-CCeEEEEeCCCC-ceE--EEee-ecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEe
Q psy14130 220 DVINCLSFNRDGSRLVTTCK-DKTVRVLDPRTG-LVI--SQGV-CHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWD 294 (494)
Q Consensus 220 ~~v~~l~~~~~~~~l~s~~~-d~~v~iwd~~~~-~~~--~~~~-~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd 294 (494)
..+.++.|+|||+++++++. ...|.+|+.... ... .... ...+.....++|+|++..++++. ..+++|.+|+
T Consensus 145 ~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~---e~~~~V~v~~ 221 (365)
T d1jofa_ 145 TGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALM---EAGNRICEYV 221 (365)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEE---TTTTEEEEEE
T ss_pred CcceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeeccceeecCCCCceEEEEECCCCceEEEec---cCCCEEEEEE
Confidence 34789999999998888764 457888876543 322 2221 12233478899999988888888 7899999999
Q ss_pred CCCCCCceeEe--ee---------------cCCCceEEeEEeCCCCEEEEEEeCCCc-----EEEEEeeCCCceEEec--
Q psy14130 295 ENDLNTPLALE--TV---------------DSSSGVLFPYYDHDTRILFLAGKGDGN-----IRYYELTNERPYIHFL-- 350 (494)
Q Consensus 295 ~~~~~~~~~~~--~~---------------~~~~~v~~~~~~~~~~~l~~~g~~dg~-----i~~wd~~~~~~~~~~~-- 350 (494)
+.......... .. ........+.++|||++||++...+.. |..|++.....+....
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~ 301 (365)
T d1jofa_ 222 IDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFL 301 (365)
T ss_dssp ECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEE
T ss_pred ecCCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecCCCceeeEeEe
Confidence 87543321111 11 011224568899999999888665544 7778876543322221
Q ss_pred -ccccCCCCeeEEEEec-CCceee-ec--cceeEEEEeeC
Q psy14130 351 -NQSLSGAPQRGLGFMP-KRGCDV-TQ--CEIFRFFKLHT 385 (494)
Q Consensus 351 -~~~~~~~~v~~~~~~p-~~~~~~-~~--~~~~~~~~l~~ 385 (494)
.....+...++++++| +|.+++ ++ ++.+.+|++..
T Consensus 302 ~~~~~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~~ 341 (365)
T d1jofa_ 302 SPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKD 341 (365)
T ss_dssp EECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEET
T ss_pred eEEEcCCCCccEEEecCCCCCEEEEEeCCCCeEEEEEEeC
Confidence 1122345578899998 777554 42 78899999876
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.99 E-value=2.7e-09 Score=103.63 Aligned_cols=151 Identities=12% Similarity=0.111 Sum_probs=108.5
Q ss_pred EEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEec-----CCCCceEEEEEcCCCCEEEEEeC---------CCeEEEE
Q psy14130 181 YIEWHPTAENVVASAGFDYLIILWDVGKGEALTVID-----CHPDVINCLSFNRDGSRLVTTCK---------DKTVRVL 246 (494)
Q Consensus 181 ~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-----~h~~~v~~l~~~~~~~~l~s~~~---------d~~v~iw 246 (494)
.+.|.+++ .++. ..|+.+.+||+.+++....+. .|...|.++.|+|||++|+.++. ++.+.+|
T Consensus 21 ~~~W~~d~-~~~~--~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~ 97 (470)
T d2bgra1 21 SLRWISDH-EYLY--KQENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIY 97 (470)
T ss_dssp CCEECSSS-EEEE--ESSSCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred CCEeCCCC-EEEE--EcCCcEEEEECCCCCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEE
Confidence 57899987 4655 357889999999998766554 34578999999999999998853 5678999
Q ss_pred eCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec----------------CC
Q psy14130 247 DPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD----------------SS 310 (494)
Q Consensus 247 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~----------------~~ 310 (494)
|+.+++ +..+..+... +....|+|++..++.+. ++.+.+|+..++.......... ..
T Consensus 98 d~~~~~-~~~l~~~~~~-~~~~~~SPDG~~ia~~~-----~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~ 170 (470)
T d2bgra1 98 DLNKRQ-LITEERIPNN-TQWVTWSPVGHKLAYVW-----NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVF 170 (470)
T ss_dssp ETTTTE-ECCSSCCCTT-EEEEEECSSTTCEEEEE-----TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTS
T ss_pred ECCCCc-ccccccCCcc-ccccccccCcceeeEee-----cccceEEECCCCceeeeeeccCCCcccccccceeeeeeec
Confidence 999887 4556677666 88999999977777655 7899999988754422211000 11
Q ss_pred CceEEeEEeCCCCEEEEEEeCCCcEEEEEee
Q psy14130 311 SGVLFPYYDHDTRILFLAGKGDGNIRYYELT 341 (494)
Q Consensus 311 ~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~ 341 (494)
.....+.|||||+.|+.....+..+..|++.
T Consensus 171 ~~~~~~~wSPDGk~ia~~~~d~~~v~~~~~~ 201 (470)
T d2bgra1 171 SAYSALWWSPNGTFLAYAQFNDTEVPLIEYS 201 (470)
T ss_dssp SSSBCEEECTTSSEEEEEEEECTTCCEEEEE
T ss_pred CCccccEECCCCCccceeEecCCcCceEEEE
Confidence 2234577999999994444344447666654
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.97 E-value=2.5e-06 Score=75.20 Aligned_cols=214 Identities=11% Similarity=0.102 Sum_probs=129.6
Q ss_pred EEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEE-eCCC--eEEEEECCCCeEEEEecCCCCceEEEEE
Q psy14130 151 VKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASA-GFDY--LIILWDVGKGEALTVIDCHPDVINCLSF 227 (494)
Q Consensus 151 v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~-s~d~--~v~iwd~~~~~~~~~~~~h~~~v~~l~~ 227 (494)
|.|-|.... .. ..+..+...+.+-+|||+|. .||-. ...+ .+.+.+...+... .+..+.+......|
T Consensus 21 l~i~d~dG~-------~~-~~l~~~~~~~~sP~wSPDGk-~IAf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 90 (269)
T d2hqsa1 21 LRVSDYDGY-------NQ-FVVHRSPQPLMSPAWSPDGS-KLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAF 90 (269)
T ss_dssp EEEEETTSC-------SC-EEEEEESSCEEEEEECTTSS-EEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEE
T ss_pred EEEEcCCCC-------Cc-EEEecCCCceeeeEECCCCC-EEEEEEeeccCcceeeeecccCcee-EEeeeeccccccee
Confidence 666676543 22 33444667788999999995 55544 3333 4666777666544 44457788899999
Q ss_pred cCCCCEEEEEeC-CCe--EEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCc--eEEEEeCCCCCCce
Q psy14130 228 NRDGSRLVTTCK-DKT--VRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDR--QVGLWDENDLNTPL 302 (494)
Q Consensus 228 ~~~~~~l~s~~~-d~~--v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~--~i~iwd~~~~~~~~ 302 (494)
+|+|+.++.... ++. +..+........... ..... .....+++++..++.+. ..++ .|.+.++......
T Consensus 91 spdg~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~---~~~g~~~i~~~~~~~~~~~- 164 (269)
T d2hqsa1 91 SPDGSKLAFALSKTGSLNLYVMDLASGQIRQVT-DGRSN-NTEPTWFPDSQNLAFTS---DQAGRPQVYKVNINGGAPQ- 164 (269)
T ss_dssp CTTSSEEEEEECTTSSCEEEEEETTTCCEEECC-CCSSC-EEEEEECTTSSEEEEEE---CTTSSCEEEEEETTSSCCE-
T ss_pred cCCCCeeeEeeecCCccceeecccccccceeee-ecccc-ccccccccccccceecc---cccCCceEeeeecccccce-
Confidence 999998887664 222 333333333322222 22222 44556777766677666 3444 5566666553321
Q ss_pred eEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec---cc--e
Q psy14130 303 ALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ---CE--I 377 (494)
Q Consensus 303 ~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~---~~--~ 377 (494)
.............|+|+++.++......+...+|...........+.. ........|+|||..++.. .+ .
T Consensus 165 --~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---~~~~~~p~~SPDG~~i~f~s~~~~~~~ 239 (269)
T d2hqsa1 165 --RITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSS---TFLDETPSLAPNGTMVIYSSSQGMGSV 239 (269)
T ss_dssp --ECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCC---SSSCEEEEECTTSSEEEEEEEETTEEE
T ss_pred --eeecccccccccccccccceeEEEeecCCceeeeEeecccccceEeec---CccccceEECCCCCEEEEEEcCCCCcE
Confidence 222234566778999999999777777777777776655433343322 3456788999999877642 33 3
Q ss_pred eEEEEeeC
Q psy14130 378 FRFFKLHT 385 (494)
Q Consensus 378 ~~~~~l~~ 385 (494)
+.++++..
T Consensus 240 l~~~~~dg 247 (269)
T d2hqsa1 240 LNLVSTDG 247 (269)
T ss_dssp EEEEETTS
T ss_pred EEEEECCC
Confidence 44555544
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=98.88 E-value=7.1e-07 Score=80.59 Aligned_cols=215 Identities=9% Similarity=-0.055 Sum_probs=136.0
Q ss_pred CCcEEEEEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC--eEEEEe-
Q psy14130 139 GGGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKG--EALTVI- 215 (494)
Q Consensus 139 ~~g~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~--~~~~~~- 215 (494)
.+|.+++.....=+||.+...+ ....+......+.+++|+++| +++++...++.+..|+.... ......
T Consensus 37 pdG~l~vt~~~~~~I~~i~p~g-------~~~~~~~~~~~~~gla~~~dG-~l~v~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (302)
T d2p4oa1 37 PDGTIFVTNHEVGEIVSITPDG-------NQQIHATVEGKVSGLAFTSNG-DLVATGWNADSIPVVSLVKSDGTVETLLT 108 (302)
T ss_dssp TTSCEEEEETTTTEEEEECTTC-------CEEEEEECSSEEEEEEECTTS-CEEEEEECTTSCEEEEEECTTSCEEEEEE
T ss_pred CCCCEEEEeCCCCEEEEEeCCC-------CEEEEEcCCCCcceEEEcCCC-CeEEEecCCceEEEEEecccccceeeccc
Confidence 4455666655443555555442 123344456789999999999 68888888888888876543 222211
Q ss_pred cCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeec--------C-CCCceEEEEECCCCeEEEEEecCCC
Q psy14130 216 DCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCH--------P-GTRSSKAVFIGDTGRIVTTGFSRHS 286 (494)
Q Consensus 216 ~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~--------~-~~~~~~~~~~~~~~~l~~~g~~~~~ 286 (494)
.........+++.++|+++++.+.++.+..+|...+......... . ......+.+. ++.++.+. ..
T Consensus 109 ~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~--~~~l~~~~---~~ 183 (302)
T d2p4oa1 109 LPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRF--GNFLYVSN---TE 183 (302)
T ss_dssp CTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEE--TTEEEEEE---TT
T ss_pred cCCccccceeEEccCCCEEeeccccccceeeeccCCcceeEecCCccceeeccCccccccccccc--CCceeeec---CC
Confidence 234566889999999999999899999999999877633222110 1 1113445444 45777777 68
Q ss_pred CceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEE--
Q psy14130 287 DRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGF-- 364 (494)
Q Consensus 287 d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~-- 364 (494)
.+.|..++.....................++++++|+.+ ++...++.|..++...+. .............++++|
T Consensus 184 ~~~i~~~~~~~~~~~~~~~~~~~~~~pdgia~d~dG~l~-va~~~~~~V~~i~p~G~~--~~~~~~~~~~~~pt~vafg~ 260 (302)
T d2p4oa1 184 KMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLY-GATHIYNSVVRIAPDRST--TIIAQAEQGVIGSTAVAFGQ 260 (302)
T ss_dssp TTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEE-EECBTTCCEEEECTTCCE--EEEECGGGTCTTEEEEEECC
T ss_pred CCeEEeccccccccccccccccCCCCCcceEECCCCCEE-EEEcCCCcEEEECCCCCE--EEEEecCCCCCCceEEEEcC
Confidence 899999987654332222222223445678999999865 777788989888765432 222222222345789999
Q ss_pred -ecCCc
Q psy14130 365 -MPKRG 369 (494)
Q Consensus 365 -~p~~~ 369 (494)
.||+.
T Consensus 261 ~~~D~~ 266 (302)
T d2p4oa1 261 TEGDCT 266 (302)
T ss_dssp STTTTT
T ss_pred CCCCCC
Confidence 55654
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=98.84 E-value=2.9e-07 Score=83.28 Aligned_cols=198 Identities=8% Similarity=-0.030 Sum_probs=131.3
Q ss_pred cEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc-eEEE
Q psy14130 178 RVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGL-VISQ 256 (494)
Q Consensus 178 ~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~-~~~~ 256 (494)
.+..+++.|+| +++++...+++|..||.... ...+......+.+++|+++|+++++...++.+..++..... ....
T Consensus 29 ~~e~iAv~pdG-~l~vt~~~~~~I~~i~p~g~--~~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~ 105 (302)
T d2p4oa1 29 FLENLASAPDG-TIFVTNHEVGEIVSITPDGN--QQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET 105 (302)
T ss_dssp CEEEEEECTTS-CEEEEETTTTEEEEECTTCC--EEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred CcCCEEECCCC-CEEEEeCCCCEEEEEeCCCC--EEEEEcCCCCcceEEEcCCCCeEEEecCCceEEEEEecccccceee
Confidence 57789999999 79999999999999987543 23344466789999999999999998888888888765443 2222
Q ss_pred ee-ecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEee--------ecCCCceEEeEEeCCCCEEEE
Q psy14130 257 GV-CHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALET--------VDSSSGVLFPYYDHDTRILFL 327 (494)
Q Consensus 257 ~~-~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~--------~~~~~~v~~~~~~~~~~~l~~ 327 (494)
+. .........+++.++ +.++++. +.++.+..+|............ .........+.+ ++..+++
T Consensus 106 ~~~~~~~~~~n~i~~~~~-g~~~v~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~--~~~~l~~ 179 (302)
T d2p4oa1 106 LLTLPDAIFLNGITPLSD-TQYLTAD---SYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKR--FGNFLYV 179 (302)
T ss_dssp EEECTTCSCEEEEEESSS-SEEEEEE---TTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEE--ETTEEEE
T ss_pred ccccCCccccceeEEccC-CCEEeec---cccccceeeeccCCcceeEecCCccceeeccCcccccccccc--cCCceee
Confidence 22 222333667777777 6777777 6788888888765322111110 011122344444 4567878
Q ss_pred EEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccceeEEEEeeC
Q psy14130 328 AGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 328 ~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~~ 385 (494)
+.+..+.|..++......... ...........+++|.++|.+.++....-+++++..
T Consensus 180 ~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~pdgia~d~dG~l~va~~~~~~V~~i~p 236 (302)
T d2p4oa1 180 SNTEKMLLLRIPVDSTDKPGE-PEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAP 236 (302)
T ss_dssp EETTTTEEEEEEBCTTSCBCC-CEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECT
T ss_pred ecCCCCeEEeccccccccccc-cccccCCCCCcceEECCCCCEEEEEcCCCcEEEECC
Confidence 888999999999876543211 111122345678999999998888644445666655
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.83 E-value=2.6e-06 Score=75.78 Aligned_cols=197 Identities=10% Similarity=0.118 Sum_probs=128.9
Q ss_pred EEEEEEcCCCCCEEEEE-eCCCeEEEEECCCCeEEEEec-CCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEE
Q psy14130 179 VGYIEWHPTAENVVASA-GFDYLIILWDVGKGEALTVID-CHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQ 256 (494)
Q Consensus 179 V~~~~~~p~~~~~l~s~-s~d~~v~iwd~~~~~~~~~~~-~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~ 256 (494)
-..+++.++....+++. +.++.|..++. .++....+. ........+++.++|.++++....+.+.+++.. ++.+..
T Consensus 72 p~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~-g~~~~~ 149 (279)
T d1q7fa_ 72 PNRVAVVRNSGDIIVTERSPTHQIQIYNQ-YGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHK 149 (279)
T ss_dssp EEEEEEETTTTEEEEEECGGGCEEEEECT-TSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEE
T ss_pred cccccccccccccceeccCCccccccccc-cccceeecCCCcccccceeccccCCcEEEEeeccceeeEeccC-Cceeec
Confidence 34566555543444443 44567877776 466666653 345667899999999998888888899999865 666666
Q ss_pred eeecCC-CCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEe-CCCc
Q psy14130 257 GVCHPG-TRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGK-GDGN 334 (494)
Q Consensus 257 ~~~~~~-~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~-~dg~ 334 (494)
+..... .....+++.++ +.++++. ...+.|++||... .....+...........++++++|+.+ ++-. .++.
T Consensus 150 ~g~~~~~~~~~~i~~d~~-g~i~v~d---~~~~~V~~~d~~G-~~~~~~g~~g~~~~P~giavD~~G~i~-Vad~~~~~~ 223 (279)
T d1q7fa_ 150 FGCSKHLEFPNGVVVNDK-QEIFISD---NRAHCVKVFNYEG-QYLRQIGGEGITNYPIGVGINSNGEIL-IADNHNNFN 223 (279)
T ss_dssp EECTTTCSSEEEEEECSS-SEEEEEE---GGGTEEEEEETTC-CEEEEESCTTTSCSEEEEEECTTCCEE-EEECSSSCE
T ss_pred ccccccccccceeeeccc-eeEEeee---ccccceeeeecCC-ceeeeecccccccCCcccccccCCeEE-EEECCCCcE
Confidence 533222 22556666666 6788877 6788999999753 221122111223457789999999866 6644 4556
Q ss_pred EEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec-cceeEEEEeeC
Q psy14130 335 IRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ-CEIFRFFKLHT 385 (494)
Q Consensus 335 i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~-~~~~~~~~l~~ 385 (494)
|.+|+ .+++.+..+... .......++++.|+|.++++. +..+++|+...
T Consensus 224 v~~f~-~~G~~~~~~~~~-~~~~~p~~vav~~dG~l~V~~~n~~v~~fr~~~ 273 (279)
T d1q7fa_ 224 LTIFT-QDGQLISALESK-VKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQ 273 (279)
T ss_dssp EEEEC-TTSCEEEEEEES-SCCSCEEEEEEETTTEEEEEETTTEEEEEECSC
T ss_pred EEEEC-CCCCEEEEEeCC-CCCCCEeEEEEeCCCcEEEEeCCCeEEEEEeee
Confidence 89988 456543333222 223457899999999887775 77899998765
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.80 E-value=7.1e-07 Score=78.66 Aligned_cols=194 Identities=10% Similarity=0.010 Sum_probs=130.2
Q ss_pred EEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEee
Q psy14130 179 VGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGV 258 (494)
Q Consensus 179 V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~ 258 (494)
...+++++++ +++++....+.+++++-.+...+.... ......+++++++++++++-..+..+..++........ ..
T Consensus 59 p~gvav~~~g-~i~v~d~~~~~i~~~~~~~~~~~~~~~-~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~-~~ 135 (260)
T d1rwia_ 59 PQGLAVDGAG-TVYVTDFNNRVVTLAAGSNNQTVLPFD-GLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTV-LP 135 (260)
T ss_dssp CCCEEECTTC-CEEEEETTTEEEEECTTCSCCEECCCC-SCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEE-CC
T ss_pred ceEEEEcCCC-CEEEeeeeeceeeeeeeccceeeeeee-eeeecccccccccceeEeeccccccccccccccceeee-ee
Confidence 4678999998 688887777777776655554443333 23567899999999988877777888888876544322 21
Q ss_pred ecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEE
Q psy14130 259 CHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYY 338 (494)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~w 338 (494)
.........+++.++ +.++++. ..++.|..+|...... .............++++++|+.+ ++....+.|..+
T Consensus 136 ~~~~~~p~~i~~~~~-g~~~v~~---~~~~~i~~~d~~~~~~--~~~~~~~~~~p~gi~~d~~g~l~-vsd~~~~~i~~~ 208 (260)
T d1rwia_ 136 FTGLNDPDGVAVDNS-GNVYVTD---TDNNRVVKLEAESNNQ--VVLPFTDITAPWGIAVDEAGTVY-VTEHNTNQVVKL 208 (260)
T ss_dssp CCSCCSCCEEEECTT-CCEEEEE---GGGTEEEEECTTTCCE--EECCCSSCCSEEEEEECTTCCEE-EEETTTTEEEEE
T ss_pred ecccCCcceeeecCC-CCEeeec---ccccccccccccccee--eeeeccccCCCccceeeeeeeee-eeecCCCEEEEE
Confidence 111122577888887 5677776 5788899999765322 12222334567789999998765 888788888888
Q ss_pred EeeCCCceEEecccccCCCCeeEEEEecCCceeeeccceeEEEEeeC
Q psy14130 339 ELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 339 d~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~~ 385 (494)
+...... ..... ..-....+|++.+++.+.++.-+.-||+++++
T Consensus 209 ~~~~~~~--~~~~~-~~~~~P~~i~~d~~g~l~vad~~~~rI~~i~~ 252 (260)
T d1rwia_ 209 LAGSTTS--TVLPF-TGLNTPLAVAVDSDRTVYVADRGNDRVVKLTS 252 (260)
T ss_dssp CTTCSCC--EECCC-CSCCCEEEEEECTTCCEEEEEGGGTEEEEECC
T ss_pred eCCCCeE--EEEcc-CCCCCeEEEEEeCCCCEEEEECCCCEEEEEeC
Confidence 7655432 22211 11245689999999998888766668887776
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.78 E-value=9e-06 Score=72.14 Aligned_cols=161 Identities=14% Similarity=0.136 Sum_probs=112.6
Q ss_pred ccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEe--cCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc
Q psy14130 175 HKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVI--DCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGL 252 (494)
Q Consensus 175 h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~--~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~ 252 (494)
.......+++.+++ .++++....+.+.+++. .++.+..+ ..+......+++.++++.+++....+.|++||.. ++
T Consensus 112 ~~~~p~~~avd~~G-~i~v~~~~~~~~~~~~~-~g~~~~~~g~~~~~~~~~~i~~d~~g~i~v~d~~~~~V~~~d~~-G~ 188 (279)
T d1q7fa_ 112 ILQHPRGVTVDNKG-RIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQ 188 (279)
T ss_dssp TCSCEEEEEECTTS-CEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CC
T ss_pred cccccceeccccCC-cEEEEeeccceeeEecc-CCceeecccccccccccceeeeccceeEEeeeccccceeeeecC-Cc
Confidence 34556789999998 67777777788888886 45666665 3466778899999999988888889999999975 66
Q ss_pred eEEEeee--cCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEe
Q psy14130 253 VISQGVC--HPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGK 330 (494)
Q Consensus 253 ~~~~~~~--~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~ 330 (494)
.+.++.. ... ....+++.+++ .++++.. ..++.|.+|+.. ++....+...........++++|+|..+ ++ +
T Consensus 189 ~~~~~g~~g~~~-~P~giavD~~G-~i~Vad~--~~~~~v~~f~~~-G~~~~~~~~~~~~~~p~~vav~~dG~l~-V~-~ 261 (279)
T d1q7fa_ 189 YLRQIGGEGITN-YPIGVGINSNG-EILIADN--HNNFNLTIFTQD-GQLISALESKVKHAQCFDVALMDDGSVV-LA-S 261 (279)
T ss_dssp EEEEESCTTTSC-SEEEEEECTTC-CEEEEEC--SSSCEEEEECTT-SCEEEEEEESSCCSCEEEEEEETTTEEE-EE-E
T ss_pred eeeeeccccccc-CCcccccccCC-eEEEEEC--CCCcEEEEECCC-CCEEEEEeCCCCCCCEeEEEEeCCCcEE-EE-e
Confidence 6666532 222 26788888885 5666641 235579999854 3322222222223457788999998644 55 4
Q ss_pred CCCcEEEEEeeCCCc
Q psy14130 331 GDGNIRYYELTNERP 345 (494)
Q Consensus 331 ~dg~i~~wd~~~~~~ 345 (494)
.+..|++|......|
T Consensus 262 ~n~~v~~fr~~~~~~ 276 (279)
T d1q7fa_ 262 KDYRLYIYRYVQLAP 276 (279)
T ss_dssp TTTEEEEEECSCCCC
T ss_pred CCCeEEEEEeeeecC
Confidence 788999999887654
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=98.78 E-value=2.1e-06 Score=77.76 Aligned_cols=197 Identities=13% Similarity=0.088 Sum_probs=126.1
Q ss_pred cEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCC----ceEEEEEcCCCCEEEEEeC--------------
Q psy14130 178 RVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPD----VINCLSFNRDGSRLVTTCK-------------- 239 (494)
Q Consensus 178 ~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~----~v~~l~~~~~~~~l~s~~~-------------- 239 (494)
.-..++|.+++ +.|+.+...+.|...|...+..........+ ..+.+++.++|++.++-..
T Consensus 72 ~P~Gl~~~~dg-~~l~vad~~~~i~~~~~~g~~~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~ 150 (314)
T d1pjxa_ 72 IPAGCQCDRDA-NQLFVADMRLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQE 150 (314)
T ss_dssp CEEEEEECSSS-SEEEEEETTTEEEEEETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSS
T ss_pred cceeEEEeCCC-CEEEEEECCCeEEEEeCCCcEEEEEeccccccccCCCcEEEECCCCCEEEecCccCcccccccceecc
Confidence 35789999998 6777777777889999865543222121111 3578999999998887532
Q ss_pred -CCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCC----eEEEEEecCCCCceEEEEeCCCCCCcee---EeeecC--
Q psy14130 240 -DKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTG----RIVTTGFSRHSDRQVGLWDENDLNTPLA---LETVDS-- 309 (494)
Q Consensus 240 -d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~~~g~~~~~d~~i~iwd~~~~~~~~~---~~~~~~-- 309 (494)
+|.|..++.. ++...... .... .+.++|++++. .++++. +..+.|..||+........ ......
T Consensus 151 ~~G~v~~~~~d-g~~~~~~~-~~~~-pNGi~~~~d~d~~~~~lyv~d---~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~ 224 (314)
T d1pjxa_ 151 KFGSIYCFTTD-GQMIQVDT-AFQF-PNGIAVRHMNDGRPYQLIVAE---TPTKKLWSYDIKGPAKIENKKVWGHIPGTH 224 (314)
T ss_dssp SCEEEEEECTT-SCEEEEEE-EESS-EEEEEEEECTTSCEEEEEEEE---TTTTEEEEEEEEETTEEEEEEEEEECCCCS
T ss_pred CCceEEEEeec-CceeEeeC-Ccce-eeeeEECCCCCcceeEEEEEe---ecccceEEeeccCccccceeeEEEEccccc
Confidence 2355555543 44333222 2222 57888988754 477776 6788999998764322211 111111
Q ss_pred CCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCc-eeeeccceeEEEEeeC
Q psy14130 310 SSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRG-CDVTQCEIFRFFKLHT 385 (494)
Q Consensus 310 ~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~-~~~~~~~~~~~~~l~~ 385 (494)
....-.++++.+|+.. ++....+.|.+||.+.++....... ......+++|.|++. +.++..+..+||++..
T Consensus 225 ~~~pdGiavD~~Gnly-Va~~~~g~I~~~dp~~g~~~~~i~~---p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~ 297 (314)
T d1pjxa_ 225 EGGADGMDFDEDNNLL-VANWGSSHIEVFGPDGGQPKMRIRC---PFEKPSNLHFKPQTKTIFVTEHENNAVWKFEW 297 (314)
T ss_dssp SCEEEEEEEBTTCCEE-EEEETTTEEEEECTTCBSCSEEEEC---SSSCEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred cccceeeEEecCCcEE-EEEcCCCEEEEEeCCCCEEEEEEEC---CCCCEEEEEEeCCCCEEEEEECCCCcEEEEEC
Confidence 1235568999999865 7777889999999887765433221 124578999999885 6677666667777665
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=98.69 E-value=1.1e-05 Score=73.10 Aligned_cols=211 Identities=10% Similarity=0.000 Sum_probs=132.5
Q ss_pred cEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeC----CCeEEEEeCCCCce
Q psy14130 178 RVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCK----DKTVRVLDPRTGLV 253 (494)
Q Consensus 178 ~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~----d~~v~iwd~~~~~~ 253 (494)
.+..++|.++| ++.++-...+.|..||..+++....+.........++++++|+++++... .+.+...+...+..
T Consensus 41 ~lEG~~~D~~G-~Ly~~D~~~g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~~~~ 119 (319)
T d2dg1a1 41 QLEGLNFDRQG-QLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNL 119 (319)
T ss_dssp CEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSC
T ss_pred CcEeCEECCCC-CEEEEECCCCEEEEEECCCCeEEEEEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCCCcee
Confidence 45689999998 68888888899999999877666666556677899999999998877643 34566666666554
Q ss_pred EEEeee-cCCCCceEEEEECCCCeEEEEEecCC---CCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEE
Q psy14130 254 ISQGVC-HPGTRSSKAVFIGDTGRIVTTGFSRH---SDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAG 329 (494)
Q Consensus 254 ~~~~~~-~~~~~~~~~~~~~~~~~l~~~g~~~~---~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g 329 (494)
...... ........+++.++ ++++++.+... ..+.+..++.... ....+ .........++|+|+++.||++-
T Consensus 120 ~~~~~~~~~~~~~nd~~~d~~-G~l~vtd~~~~~~~~~g~v~~~~~dg~-~~~~~--~~~~~~pnGia~s~dg~~lyvad 195 (319)
T d2dg1a1 120 QDIIEDLSTAYCIDDMVFDSK-GGFYFTDFRGYSTNPLGGVYYVSPDFR-TVTPI--IQNISVANGIALSTDEKVLWVTE 195 (319)
T ss_dssp EEEECSSSSCCCEEEEEECTT-SCEEEEECCCBTTBCCEEEEEECTTSC-CEEEE--EEEESSEEEEEECTTSSEEEEEE
T ss_pred eeeccCCCcccCCcceeEEec-cceeecccccccccCcceeEEEecccc-eeEEE--eeccceeeeeeeccccceEEEec
Confidence 333322 12233567788888 46666652111 1234555554432 11111 11223456789999999998998
Q ss_pred eCCCcEEEEEeeCCCceEEec-----ccccCCCCeeEEEEecCCceeeeccceeEEEEeeCCCCeEEEe
Q psy14130 330 KGDGNIRYYELTNERPYIHFL-----NQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHTTRNMCEPI 393 (494)
Q Consensus 330 ~~dg~i~~wd~~~~~~~~~~~-----~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~ 393 (494)
+..+.|..||+.......... ..........++++.++|.+.++..+..+|+.++.....+..|
T Consensus 196 ~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p~G~~l~~i 264 (319)
T d2dg1a1 196 TTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQI 264 (319)
T ss_dssp GGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTTSCEEEEE
T ss_pred ccCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECCCCcEEEEE
Confidence 899999999987542211111 1111123367899999999888854434444444422344433
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.60 E-value=1.5e-06 Score=76.58 Aligned_cols=196 Identities=9% Similarity=0.018 Sum_probs=123.9
Q ss_pred ccEEEEEEcCCCCCEEEEE-eCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEE
Q psy14130 177 RRVGYIEWHPTAENVVASA-GFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVIS 255 (494)
Q Consensus 177 ~~V~~~~~~p~~~~~l~s~-s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~ 255 (494)
..-.++++.++| ++.++. +..+.+..++............-......++++++|+++++....+.+++++-.+...+.
T Consensus 14 ~~P~~vavd~dG-~i~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~gvav~~~g~i~v~d~~~~~i~~~~~~~~~~~~ 92 (260)
T d1rwia_ 14 LSPSGVAVDSAG-NVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVL 92 (260)
T ss_dssp CCEEEEEECTTC-CEEEEECSSSCEEEEEC----CEEECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEEC
T ss_pred CCCCEEEEcCCC-CEEEEEcCCCCEEEEEcCCCceEEEeccCCccCceEEEEcCCCCEEEeeeeeceeeeeeeccceeee
Confidence 345799999998 555554 455677777654433222212223456789999999988887777777777666555443
Q ss_pred EeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcE
Q psy14130 256 QGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNI 335 (494)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i 335 (494)
..... ..+..+++.++ +.++++. ..+..+..++...... .............++++++++.+ ++...++.|
T Consensus 93 ~~~~~--~~p~~iavd~~-g~i~v~d---~~~~~~~~~~~~~~~~--~~~~~~~~~~p~~i~~~~~g~~~-v~~~~~~~i 163 (260)
T d1rwia_ 93 PFDGL--NYPEGLAVDTQ-GAVYVAD---RGNNRVVKLAAGSKTQ--TVLPFTGLNDPDGVAVDNSGNVY-VTDTDNNRV 163 (260)
T ss_dssp CCCSC--CSEEEEEECTT-CCEEEEE---GGGTEEEEECTTCSSC--EECCCCSCCSCCEEEECTTCCEE-EEEGGGTEE
T ss_pred eeeee--eeccccccccc-ceeEeec---ccccccccccccccee--eeeeecccCCcceeeecCCCCEe-eeccccccc
Confidence 33222 22678888787 5677776 4667777777654322 12222233456678999998865 777788889
Q ss_pred EEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccceeEEEEeeC
Q psy14130 336 RYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 336 ~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~~ 385 (494)
..+|....... .. .........++++.+++.+.++..+.-+++++..
T Consensus 164 ~~~d~~~~~~~-~~--~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~ 210 (260)
T d1rwia_ 164 VKLEAESNNQV-VL--PFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLA 210 (260)
T ss_dssp EEECTTTCCEE-EC--CCSSCCSEEEEEECTTCCEEEEETTTTEEEEECT
T ss_pred cccccccceee-ee--eccccCCCccceeeeeeeeeeeecCCCEEEEEeC
Confidence 99987765432 21 1122345689999999998888766666666654
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=98.54 E-value=0.00014 Score=65.56 Aligned_cols=221 Identities=12% Similarity=0.045 Sum_probs=133.4
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCC----CeEEEEECCCCeEEEEecC--CCCceE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFD----YLIILWDVGKGEALTVIDC--HPDVIN 223 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d----~~v~iwd~~~~~~~~~~~~--h~~~v~ 223 (494)
+|..|+...+ ...............++++++| +++++...+ +.+...+...+........ -.....
T Consensus 62 ~I~ri~p~g~-------~~~~~~~~~~~~p~gla~~~dG-~l~va~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~n 133 (319)
T d2dg1a1 62 NIFKINPETK-------EIKRPFVSHKANPAAIKIHKDG-RLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCID 133 (319)
T ss_dssp EEEEECTTTC-------CEEEEEECSSSSEEEEEECTTS-CEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEE
T ss_pred EEEEEECCCC-------eEEEEEeCCCCCeeEEEECCCC-CEEEEecCCCccceeEEEEcCCCceeeeeccCCCcccCCc
Confidence 4555655444 2222333345567899999998 677765432 3455555555444333321 234578
Q ss_pred EEEEcCCCCEEEEEeC------CCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCC
Q psy14130 224 CLSFNRDGSRLVTTCK------DKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEND 297 (494)
Q Consensus 224 ~l~~~~~~~~l~s~~~------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~ 297 (494)
.+++.++|++.++... .+.+..++...+. +..+...-.. ...++|+++++.++++- +..+.|..||+..
T Consensus 134 d~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~-~~~~~~~~~~-pnGia~s~dg~~lyvad---~~~~~I~~~d~~~ 208 (319)
T d2dg1a1 134 DMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRT-VTPIIQNISV-ANGIALSTDEKVLWVTE---TTANRLHRIALED 208 (319)
T ss_dssp EEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCC-EEEEEEEESS-EEEEEECTTSSEEEEEE---GGGTEEEEEEECT
T ss_pred ceeEEeccceeecccccccccCcceeEEEecccce-eEEEeeccce-eeeeeeccccceEEEec---ccCCceEEEEEcC
Confidence 8999999997776432 2346666665443 3333222222 67899999987788887 6789999999864
Q ss_pred CCCceeE------eeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecc-cc--cCCCCeeEEEEecCC
Q psy14130 298 LNTPLAL------ETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLN-QS--LSGAPQRGLGFMPKR 368 (494)
Q Consensus 298 ~~~~~~~------~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~-~~--~~~~~v~~~~~~p~~ 368 (494)
....... .........-.++++++|+.. ++....+.|.+||- .++.+.++.. .- .....+.+++|.|++
T Consensus 209 ~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~-Va~~~~g~V~~~~p-~G~~l~~i~~P~~~~~~~~~~~~~~~~~~~ 286 (319)
T d2dg1a1 209 DGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLY-VAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGT 286 (319)
T ss_dssp TSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEE-EEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTS
T ss_pred CCceeccccceeeeccCCccceeeeeEcCCCCEE-EEEcCCCEEEEECC-CCcEEEEEeCCCcCCCcCceeeeEEEeCCC
Confidence 3222111 111122345678999999865 88888999999995 6765444321 11 112347899999876
Q ss_pred ceeee-c-----cceeEEEEeeC
Q psy14130 369 GCDVT-Q-----CEIFRFFKLHT 385 (494)
Q Consensus 369 ~~~~~-~-----~~~~~~~~l~~ 385 (494)
..++. . .+...+|.+..
T Consensus 287 ~~~~~t~~~~~~~~~g~l~~~~~ 309 (319)
T d2dg1a1 287 NQLIICSNDIEMGGGSMLYTVNG 309 (319)
T ss_dssp CEEEEEEECGGGTCCEEEEEEEC
T ss_pred CEEEEEcCCCCcCCceeEEEEeC
Confidence 54433 1 34566776655
|
| >d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Nidogen species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.39 E-value=0.0004 Score=60.37 Aligned_cols=226 Identities=10% Similarity=-0.037 Sum_probs=142.3
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.|+-.+++....... .....+..+...+.+++|++..+.++.+-..++.|+..++..+.....+......+.+++++
T Consensus 10 ~~I~~~~ld~~~~~~~--~~~~~~~~~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~~v~~~~~~~p~~iAvD 87 (263)
T d1npea_ 10 GKIERLPLERNTMKKT--EAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALD 87 (263)
T ss_dssp EEEEEEEESSSCBCGG--GCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEE
T ss_pred CeEEEEECCCcccccc--ccccccccCCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcEEEEEeccccccEEEEe
Confidence 3566667654432111 22233444556788999998875455555667889999987665555554444678999998
Q ss_pred CCCCEEEEE-eCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee
Q psy14130 229 RDGSRLVTT-CKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV 307 (494)
Q Consensus 229 ~~~~~l~s~-~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~ 307 (494)
.-+..|..+ ...+.|.+.++...... .+.......+..++..|..+.++.+-.. .....|.--++..... ..+. .
T Consensus 88 ~~~~~lY~~d~~~~~I~~~~~dg~~~~-~l~~~~l~~p~~l~vdp~~g~ly~t~~~-~~~~~I~r~~~dG~~~-~~i~-~ 163 (263)
T d1npea_ 88 HLGRTIFWTDSQLDRIEVAKMDGTQRR-VLFDTGLVNPRGIVTDPVRGNLYWTDWN-RDNPKIETSHMDGTNR-RILA-Q 163 (263)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSCSCE-EEECSSCSSEEEEEEETTTTEEEEEECC-SSSCEEEEEETTSCCC-EEEE-C
T ss_pred ccCCeEEEeccCCCEEEEEecCCceEE-EEecccccCCcEEEEecccCcEEEeecC-CCCcEEEEecCCCCCc-eeee-e
Confidence 866666544 45789999998865533 2333332347889999998888887621 1123344445554322 2221 2
Q ss_pred cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccceeEEEEeeC
Q psy14130 308 DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 308 ~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~~ 385 (494)
..-.....+++++.++.||.+-...+.|...++..... ...+... ....++++. ++.+.++..+..+++.++.
T Consensus 164 ~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~g~~~-~~v~~~~---~~P~~lav~-~~~lYwtd~~~~~I~~~~~ 236 (263)
T d1npea_ 164 DNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGR-RKVLEGL---QYPFAVTSY-GKNLYYTDWKTNSVIAMDL 236 (263)
T ss_dssp TTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEE-EEEEECC---CSEEEEEEE-TTEEEEEETTTTEEEEEET
T ss_pred ecccccceEEEeecCcEEEEEeCCCCEEEEEECCCCCe-EEEECCC---CCcEEEEEE-CCEEEEEECCCCEEEEEEC
Confidence 23356678999999999989888889999999876543 2233222 224588886 4566677655556776665
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.37 E-value=0.00023 Score=62.00 Aligned_cols=183 Identities=10% Similarity=0.045 Sum_probs=107.9
Q ss_pred ecccccccEEEEEEcCCCCCEEEEEeCCCeEE--EEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEe-CCC--eEEE
Q psy14130 171 DLHGHKRRVGYIEWHPTAENVVASAGFDYLII--LWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTC-KDK--TVRV 245 (494)
Q Consensus 171 ~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~--iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~-~d~--~v~i 245 (494)
.+..+........|+|+|..+++....++... .+....... ..............+++++..++..+ .++ .|.+
T Consensus 77 ~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~ 155 (269)
T d2hqsa1 77 QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYK 155 (269)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEE
T ss_pred EEeeeecccccceecCCCCeeeEeeecCCccceeecccccccc-eeeeeccccccccccccccccceecccccCCceEee
Confidence 44557788889999999954444444444333 333333333 33333455556667888777555544 444 4666
Q ss_pred EeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEE--EEeCCCCCCceeEeeecCCCceEEeEEeCCCC
Q psy14130 246 LDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVG--LWDENDLNTPLALETVDSSSGVLFPYYDHDTR 323 (494)
Q Consensus 246 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~--iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 323 (494)
.++..+... .+..+... .....|+|++..++... ...+... +.|..... . ...........+.|+|||+
T Consensus 156 ~~~~~~~~~-~~~~~~~~-~~~~~~spdg~~~~~~~---~~~~~~~i~~~~~~~~~--~--~~~~~~~~~~~p~~SPDG~ 226 (269)
T d2hqsa1 156 VNINGGAPQ-RITWEGSQ-NQDADVSSDGKFMVMVS---SNGGQQHIAKQDLATGG--V--QVLSSTFLDETPSLAPNGT 226 (269)
T ss_dssp EETTSSCCE-ECCCSSSE-EEEEEECTTSSEEEEEE---ECSSCEEEEEEETTTCC--E--EECCCSSSCEEEEECTTSS
T ss_pred eecccccce-eeeccccc-ccccccccccceeEEEe---ecCCceeeeEeeccccc--c--eEeecCccccceEECCCCC
Confidence 666665432 23333333 56778999988777776 3444444 44544322 2 2223445667889999999
Q ss_pred EEEEEEeC--CCcEEEEEeeCCCceEEecccccCCCCeeEEEEecC
Q psy14130 324 ILFLAGKG--DGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPK 367 (494)
Q Consensus 324 ~l~~~g~~--dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 367 (494)
.|+.+... ...|+++++..+.. ..+ ... ...+...+|+|-
T Consensus 227 ~i~f~s~~~~~~~l~~~~~dg~~~-~~l-t~~--~g~~~~p~WSP~ 268 (269)
T d2hqsa1 227 MVIYSSSQGMGSVLNLVSTDGRFK-ARL-PAT--DGQVKFPAWSPY 268 (269)
T ss_dssp EEEEEEEETTEEEEEEEETTSCCE-EEC-CCS--SSEEEEEEECCC
T ss_pred EEEEEEcCCCCcEEEEEECCCCCE-EEE-eCC--CCcEEeEEeCCC
Confidence 99655443 34578888877654 232 221 345778899983
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=98.30 E-value=0.00036 Score=62.56 Aligned_cols=117 Identities=16% Similarity=0.177 Sum_probs=85.6
Q ss_pred ccEEEEEEcCCCC----CEEEEEeCCCeEEEEECCCCeEE------EEecC-CCCceEEEEEcCCCCEEEEEeCCCeEEE
Q psy14130 177 RRVGYIEWHPTAE----NVVASAGFDYLIILWDVGKGEAL------TVIDC-HPDVINCLSFNRDGSRLVTTCKDKTVRV 245 (494)
Q Consensus 177 ~~V~~~~~~p~~~----~~l~s~s~d~~v~iwd~~~~~~~------~~~~~-h~~~v~~l~~~~~~~~l~s~~~d~~v~i 245 (494)
..-+.++|+|+++ .++++-+..+.|..+|+.....+ ..+.+ +......+++..+|++.++....+.|.+
T Consensus 172 ~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~g~I~~ 251 (314)
T d1pjxa_ 172 QFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEV 251 (314)
T ss_dssp SSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEE
T ss_pred ceeeeeEECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEccccccccceeeEEecCCcEEEEEcCCCEEEE
Confidence 3457899998763 25666677889999987543222 12222 2334678999999998888888899999
Q ss_pred EeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCC
Q psy14130 246 LDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEND 297 (494)
Q Consensus 246 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~ 297 (494)
||...++.+..+...... +..++|.+++..|+++. +.++.|..+++..
T Consensus 252 ~dp~~g~~~~~i~~p~~~-~t~~afg~d~~~lyVt~---~~~g~i~~~~~~~ 299 (314)
T d1pjxa_ 252 FGPDGGQPKMRIRCPFEK-PSNLHFKPQTKTIFVTE---HENNAVWKFEWQR 299 (314)
T ss_dssp ECTTCBSCSEEEECSSSC-EEEEEECTTSSEEEEEE---TTTTEEEEEECSS
T ss_pred EeCCCCEEEEEEECCCCC-EEEEEEeCCCCEEEEEE---CCCCcEEEEECCC
Confidence 999988876666655444 78899988877788887 6788898888754
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.27 E-value=0.00079 Score=59.58 Aligned_cols=202 Identities=12% Similarity=0.026 Sum_probs=129.4
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecC----CCCceEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDC----HPDVINCL 225 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~----h~~~v~~l 225 (494)
+|.-||..++. . ..+ .....+.++++.+++ .++++ +.+ .+.++|..+++....... ....++.+
T Consensus 41 ~I~r~d~~~g~-------~-~~~-~~~~~~~~i~~~~dg-~l~va-~~~-gl~~~d~~tg~~~~l~~~~~~~~~~~~nd~ 108 (295)
T d2ghsa1 41 ELHELHLASGR-------K-TVH-ALPFMGSALAKISDS-KQLIA-SDD-GLFLRDTATGVLTLHAELESDLPGNRSNDG 108 (295)
T ss_dssp EEEEEETTTTE-------E-EEE-ECSSCEEEEEEEETT-EEEEE-ETT-EEEEEETTTCCEEEEECSSTTCTTEEEEEE
T ss_pred EEEEEECCCCe-------E-EEE-ECCCCcEEEEEecCC-CEEEE-EeC-ccEEeecccceeeEEeeeecCCCcccceee
Confidence 57778877662 1 111 134568899999887 56654 444 588999998875433321 12357899
Q ss_pred EEcCCCCEEEEEeC----CCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCC--
Q psy14130 226 SFNRDGSRLVTTCK----DKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLN-- 299 (494)
Q Consensus 226 ~~~~~~~~l~s~~~----d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~-- 299 (494)
.+.|+|++.++... .+.-.+|.+..++.......... ...++|++++..++.+. +..+.|..|++....
T Consensus 109 ~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~~~~~--~Ng~~~s~d~~~l~~~d---t~~~~I~~~~~d~~~~~ 183 (295)
T d2ghsa1 109 RMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFADISI--PNSICFSPDGTTGYFVD---TKVNRLMRVPLDARTGL 183 (295)
T ss_dssp EECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEEEESS--EEEEEECTTSCEEEEEE---TTTCEEEEEEBCTTTCC
T ss_pred EECCCCCEEEEeccccccccceeEeeecCCcEEEEeeccCC--cceeeecCCCceEEEee---cccceeeEeeecccccc
Confidence 99999997776543 23456677767765544443332 57899999988888888 788999999875321
Q ss_pred ---CceeEeee-cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEe-cCCc-eeee
Q psy14130 300 ---TPLALETV-DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFM-PKRG-CDVT 373 (494)
Q Consensus 300 ---~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~-p~~~-~~~~ 373 (494)
........ ......-.++++.+|+.. ++.-..+.|..||- .++.+..+ .- . ...+++++|- |+.. ++++
T Consensus 184 ~~~~~~~~~~~~~~~g~pdG~~vD~~GnlW-va~~~~g~V~~~dp-~G~~~~~i-~l-P-~~~~T~~~FGG~d~~~LyvT 258 (295)
T d2ghsa1 184 PTGKAEVFIDSTGIKGGMDGSVCDAEGHIW-NARWGEGAVDRYDT-DGNHIARY-EV-P-GKQTTCPAFIGPDASRLLVT 258 (295)
T ss_dssp BSSCCEEEEECTTSSSEEEEEEECTTSCEE-EEEETTTEEEEECT-TCCEEEEE-EC-S-CSBEEEEEEESTTSCEEEEE
T ss_pred cccceEEEeccCcccccccceEEcCCCCEE-eeeeCCCceEEecC-CCcEeeEe-cC-C-CCceEEEEEeCCCCCEEEEE
Confidence 11111111 223456778999999866 77667888999994 56654333 11 1 2358999996 4543 4444
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.22 E-value=0.0022 Score=60.65 Aligned_cols=151 Identities=11% Similarity=0.078 Sum_probs=83.4
Q ss_pred ceEEEEEcCCCCEEEEEeC-C---CeEEEEeCCCCceEEEeeecCCC----CceEEEEECCCCeEEEEEec-CCCCceEE
Q psy14130 221 VINCLSFNRDGSRLVTTCK-D---KTVRVLDPRTGLVISQGVCHPGT----RSSKAVFIGDTGRIVTTGFS-RHSDRQVG 291 (494)
Q Consensus 221 ~v~~l~~~~~~~~l~s~~~-d---~~v~iwd~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~g~~-~~~d~~i~ 291 (494)
.+..+.|++++++++.... + ..+.++|..++++...+..+... ......|.+++..++..-.+ .+.-+.+.
T Consensus 256 y~~~~~W~~d~~~~~~~~nR~q~~~~i~~~d~~tg~~~~~~~e~~~~wv~~~~~~p~~~~dg~~~~fi~~se~~g~~~ly 335 (465)
T d1xfda1 256 YITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFY 335 (465)
T ss_dssp EEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEE
T ss_pred eeeeeEEcCCCeEEEEEEccccccceEEEEcCCCCcEEEEEEEcCCceEeccCCceeEccCCCeeEEEEeeeecccCceE
Confidence 4678999999886665432 2 35888999999866555433321 12345788887765443211 11223344
Q ss_pred EEeCCC------CCCceeEeeecCCCceEE-eEEeCCCCEEEEEEeCCC--cEEEEEeeC--CCceEEecc-cccCCCCe
Q psy14130 292 LWDEND------LNTPLALETVDSSSGVLF-PYYDHDTRILFLAGKGDG--NIRYYELTN--ERPYIHFLN-QSLSGAPQ 359 (494)
Q Consensus 292 iwd~~~------~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~g~~dg--~i~~wd~~~--~~~~~~~~~-~~~~~~~v 359 (494)
..++.. ......+ ..+.-.|.. +.|+++++.+|.++..++ .-++|.+.- +.. ...+. ........
T Consensus 336 ~~~~~~~~~~~~~~~~~~L--T~G~w~V~~i~~~d~~~~~vyF~a~~~~p~~~hly~v~l~g~~~-~~~lt~~~~~~~~~ 412 (465)
T d1xfda1 336 HITVSSSQPNSSNDNIQSI--TSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFN-RQCLSCDLVENCTY 412 (465)
T ss_dssp EEEEECSSCCSSSCCCCBS--CCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCC-CBCSSTTSSSSCCC
T ss_pred EEEeccccccCCCceeEEe--ccCCceEEEEEEEcCCCCEEEEEEeCCCCCceEEEEEECCCCCc-ceeeccccCCCCCE
Confidence 433221 1111111 112334554 469999999988876553 345666642 221 11111 12233457
Q ss_pred eEEEEecCCceeeec
Q psy14130 360 RGLGFMPKRGCDVTQ 374 (494)
Q Consensus 360 ~~~~~~p~~~~~~~~ 374 (494)
..+.|+|++.+++..
T Consensus 413 ~~~~~S~~~~y~v~~ 427 (465)
T d1xfda1 413 FSASFSHSMDFFLLK 427 (465)
T ss_dssp CEEEECTTSSEEEEE
T ss_pred EEEEECCCCCEEEEE
Confidence 799999999988753
|
| >d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Low density lipoprotein (LDL) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.18 E-value=0.0016 Score=56.54 Aligned_cols=223 Identities=13% Similarity=-0.014 Sum_probs=137.4
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe----EEEEecCCCCceE
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE----ALTVIDCHPDVIN 223 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~----~~~~~~~h~~~v~ 223 (494)
.+.|+-.++.+... ..+......+.+++|++..+.+..+=..++.|...++.... ....+......+.
T Consensus 9 ~~~I~~~~l~~~~~--------~~~~~~~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~p~ 80 (266)
T d1ijqa1 9 RHEVRKMTLDRSEY--------TSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 80 (266)
T ss_dssp BSSEEEEETTSCCC--------EEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred CCeEEEEECCCCcc--------eeeeCCCCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCCCcc
Confidence 34688888876522 12223455678999998874455554566778777764321 1222333345677
Q ss_pred EEEEcCCCCEEEEE-eCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCce
Q psy14130 224 CLSFNRDGSRLVTT-CKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPL 302 (494)
Q Consensus 224 ~l~~~~~~~~l~s~-~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~ 302 (494)
++++.+.+..|..+ ...++|.+.++.............. .+..++..|..+.++.+.+ +..+.|...++.... ..
T Consensus 81 glAvD~~~~~lY~~d~~~~~I~v~~~~g~~~~~~~~~~~~-~P~~l~vd~~~g~ly~~~~--~~~~~I~r~~~dGs~-~~ 156 (266)
T d1ijqa1 81 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGS-KPRAIVVDPVHGFMYWTDW--GTPAKIKKGGLNGVD-IY 156 (266)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTC-CEEEEEEETTTTEEEEEEC--SSSCEEEEEETTSCC-EE
T ss_pred eEEEeeccceEEEEecCCCEEEeEecCCceEEEEEcCCCC-CcceEEEEcccCeEEEecc--CCCcceeEeccCCCc-ee
Confidence 89998866655555 4567899999986654444443333 3788999998888888863 344567777775432 22
Q ss_pred eEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccceeEEEE
Q psy14130 303 ALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFK 382 (494)
Q Consensus 303 ~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~ 382 (494)
.+. .........+++++.++.||.+-...+.|...++..... ..............++++.. +.+.++.-+.-++++
T Consensus 157 ~l~-~~~~~~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG~~~-~~~~~~~~~~~~p~~lav~~-~~ly~td~~~~~I~~ 233 (266)
T d1ijqa1 157 SLV-TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFS 233 (266)
T ss_dssp EEE-CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEE
T ss_pred ccc-ccccceeeEEEeeccccEEEEecCCcCEEEEEECCCCCE-EEEEeCCCcccccEEEEEEC-CEEEEEECCCCeEEE
Confidence 222 123355788999999999989988889999999876543 22222222223456788774 455565434445555
Q ss_pred eeC
Q psy14130 383 LHT 385 (494)
Q Consensus 383 l~~ 385 (494)
++.
T Consensus 234 ~~~ 236 (266)
T d1ijqa1 234 ANR 236 (266)
T ss_dssp EET
T ss_pred EEC
Confidence 543
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.16 E-value=0.00047 Score=61.08 Aligned_cols=205 Identities=10% Similarity=0.007 Sum_probs=125.0
Q ss_pred EEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeec
Q psy14130 181 YIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCH 260 (494)
Q Consensus 181 ~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~ 260 (494)
+..|++....++.+--..+.|..||..+++.. .+. ....+.++++.++|.++++ +.+ .+.++|..+++........
T Consensus 22 gp~wd~~~~~l~wvDi~~~~I~r~d~~~g~~~-~~~-~~~~~~~i~~~~dg~l~va-~~~-gl~~~d~~tg~~~~l~~~~ 97 (295)
T d2ghsa1 22 GPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIA-SDD-GLFLRDTATGVLTLHAELE 97 (295)
T ss_dssp EEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEE-ETT-EEEEEETTTCCEEEEECSS
T ss_pred CCeEECCCCEEEEEECCCCEEEEEECCCCeEE-EEE-CCCCcEEEEEecCCCEEEE-EeC-ccEEeecccceeeEEeeee
Confidence 45688765456665556789999999888643 333 3567889999999877765 444 6899999998854332211
Q ss_pred C---CCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEE
Q psy14130 261 P---GTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRY 337 (494)
Q Consensus 261 ~---~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~ 337 (494)
. ..++..+...+++...+++.......+.-.+|.+.+...... .........++|+++++.++++.+..+.|..
T Consensus 98 ~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~---~~~~~~~Ng~~~s~d~~~l~~~dt~~~~I~~ 174 (295)
T d2ghsa1 98 SDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKL---FADISIPNSICFSPDGTTGYFVDTKVNRLMR 174 (295)
T ss_dssp TTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEE---EEEESSEEEEEECTTSCEEEEEETTTCEEEE
T ss_pred cCCCcccceeeEECCCCCEEEEeccccccccceeEeeecCCcEEEE---eeccCCcceeeecCCCceEEEeecccceeeE
Confidence 1 123567777787544444432112233445665544322111 1222345678999999999899988999999
Q ss_pred EEeeCCCc-----eEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEeeCCCCeEEEeE
Q psy14130 338 YELTNERP-----YIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHTTRNMCEPIS 394 (494)
Q Consensus 338 wd~~~~~~-----~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~~~~~~~~~~ 394 (494)
|++..... ...+...........++++..+|.+.++. .+.+..|+.. ...+..+.
T Consensus 175 ~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp~--G~~~~~i~ 236 (295)
T d2ghsa1 175 VPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD--GNHIARYE 236 (295)
T ss_dssp EEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT--CCEEEEEE
T ss_pred eeecccccccccceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEecCC--CcEeeEec
Confidence 99853221 11111111223457899999999888774 5555555532 23454443
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.15 E-value=0.00023 Score=62.22 Aligned_cols=225 Identities=11% Similarity=0.081 Sum_probs=119.1
Q ss_pred EEEEEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCC-----CeEEEEECCCCeEEEEec
Q psy14130 142 AFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFD-----YLIILWDVGKGEALTVID 216 (494)
Q Consensus 142 ~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d-----~~v~iwd~~~~~~~~~~~ 216 (494)
.++....+.|.+.|+.++ +. ..|..+...+...+|||+|..++++...+ ..|.+.+..+++......
T Consensus 14 ~v~f~~~~dl~~~d~~~g-------~~-~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~lt~ 85 (281)
T d1k32a2 14 RIIFVCCDDLWEHDLKSG-------ST-RKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITY 85 (281)
T ss_dssp EEEEEETTEEEEEETTTC-------CE-EEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEECCC
T ss_pred EEEEEeCCcEEEEECCCC-------CE-EEEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceEEeee
Confidence 444444456888888876 32 35666778889999999995444444322 247788887776544322
Q ss_pred ------CCCCceEEEEEcCCCCEEEEEeCC------CeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecC
Q psy14130 217 ------CHPDVINCLSFNRDGSRLVTTCKD------KTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSR 284 (494)
Q Consensus 217 ------~h~~~v~~l~~~~~~~~l~s~~~d------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 284 (494)
..........|+|+|+.|+..... ..+...+...+..... +.. .....+.+++..++...
T Consensus 86 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~--- 157 (281)
T d1k32a2 86 FSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPL---NLG--PATHILFADGRRVIGRN--- 157 (281)
T ss_dssp CCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEEC---CSC--SCSEEEEETTEEEEEES---
T ss_pred cCCCccCccccccccccCCCCCEEEEEEccCCCccceeeeeecCCCceeEEe---cCC--ccceeeecCCCeEEEee---
Confidence 112345678899999998876432 2355566554443221 122 12234555555555543
Q ss_pred CCCc-----------eEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCC--CcEEEEEeeCCCceEEecc
Q psy14130 285 HSDR-----------QVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGD--GNIRYYELTNERPYIHFLN 351 (494)
Q Consensus 285 ~~d~-----------~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~d--g~i~~wd~~~~~~~~~~~~ 351 (494)
..+. ...+...... . .............+.++++. ++.....+ ..|.++|+.+++. .. +.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~d~~g~~~-~~-lt 230 (281)
T d1k32a2 158 TFELPHWKGYRGGTRGKIWIEVNSG-A--FKKIVDMSTHVSSPVIVGHR--IYFITDIDGFGQIYSTDLDGKDL-RK-HT 230 (281)
T ss_dssp CSCCTTSTTCCSTTCCEEEEEEETT-E--EEEEECCSSCCEEEEEETTE--EEEEECTTSSCEEEEEETTSCSC-EE-CC
T ss_pred ccccceeeeeccCCcceeeeecccc-c--eeeccCCccccceeeeeccc--cceecccccccceEEEeCCCCce-EE-ee
Confidence 1111 1111111110 0 11112233445556666653 32333333 3477777776654 22 22
Q ss_pred cccCCCCeeEEEEecCCceeee-ccceeEEEEeeCCCCeEEEeE
Q psy14130 352 QSLSGAPQRGLGFMPKRGCDVT-QCEIFRFFKLHTTRNMCEPIS 394 (494)
Q Consensus 352 ~~~~~~~v~~~~~~p~~~~~~~-~~~~~~~~~l~~~~~~~~~~~ 394 (494)
.. .......|+|||..++. .++.+.++++.+ +..++|.
T Consensus 231 ~~---~~~~~~~~SpDG~~I~f~~~~~l~~~d~~~--g~~~~i~ 269 (281)
T d1k32a2 231 SF---TDYYPRHLNTDGRRILFSKGGSIYIFNPDT--EKIEKIE 269 (281)
T ss_dssp CC---CSSCEEEEEESSSCEEEEETTEEEEECTTT--CCEEECC
T ss_pred cC---CCcccccCcCCCCEEEEEeCCEEEEEECCC--CCEEEec
Confidence 21 12233468999987766 466666666655 3455443
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.12 E-value=5.5e-05 Score=72.12 Aligned_cols=151 Identities=10% Similarity=0.056 Sum_probs=95.7
Q ss_pred EEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCC---CCceEEEEEcCCCCEEEEEe---------CCCeEEEEeCC
Q psy14130 182 IEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCH---PDVINCLSFNRDGSRLVTTC---------KDKTVRVLDPR 249 (494)
Q Consensus 182 ~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h---~~~v~~l~~~~~~~~l~s~~---------~d~~v~iwd~~ 249 (494)
..|.+++ .++. -..+|.|.+||+.+++....+... ...+....|+||+++++... ..+.+.++|+.
T Consensus 22 ~~W~~~~-~~~~-~~~~g~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~ 99 (465)
T d1xfda1 22 AKWISDT-EFIY-REQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIP 99 (465)
T ss_dssp CCBSSSS-CBCC-CCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESS
T ss_pred CEEeCCC-cEEE-EeCCCcEEEEECCCCCEEEEEcCccccccccceeEECCCCCeEEEEEcccceeEeeccccEEEEEcc
Confidence 3588876 3444 355789999999888764444432 24677889999999888764 35788999999
Q ss_pred CCceEEEeeecC-CCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCC-----------------
Q psy14130 250 TGLVISQGVCHP-GTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSS----------------- 311 (494)
Q Consensus 250 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~----------------- 311 (494)
+++......... ...+....|+|++..++.+. ++.|.+.+....... .+..-+...
T Consensus 100 ~~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~-----~~nl~~~~~~~~~~~-~lt~~g~~~~i~nG~~d~vyeee~~~ 173 (465)
T d1xfda1 100 HGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF-----ENNIYYCAHVGKQAI-RVVSTGKEGVIYNGLSDWLYEEEILK 173 (465)
T ss_dssp SCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE-----TTEEEEESSSSSCCE-EEECCCBTTTEEEEECCHHHHHTTSS
T ss_pred CCceeeccCccCCccccceeeeccCCceEEEEe-----cceEEEEecCCCceE-EEecccCcceeeccccchhhhhhhcc
Confidence 887543322111 12245678999988877765 788999887654332 221111111
Q ss_pred ceEEeEEeCCCCEEEEEEeCCCcEEEEEe
Q psy14130 312 GVLFPYYDHDTRILFLAGKGDGNIRYYEL 340 (494)
Q Consensus 312 ~v~~~~~~~~~~~l~~~g~~dg~i~~wd~ 340 (494)
.-..+.|||||+.|+..--.+..|..+.+
T Consensus 174 ~~~a~~WSPDgk~iaf~~~D~s~V~~~~~ 202 (465)
T d1xfda1 174 THIAHWWSPDGTRLAYAAINDSRVPIMEL 202 (465)
T ss_dssp SSEEEEECTTSSEEEEEEEECTTSCEEEE
T ss_pred ccceEEECCCCCeEEEEEecccccceeec
Confidence 11356799999999554434444444433
|
| >d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=97.85 E-value=0.0012 Score=59.88 Aligned_cols=198 Identities=9% Similarity=-0.003 Sum_probs=126.0
Q ss_pred CCCCCEEEEEeCCCeEEEEECCCCeEEEEec-CCCCceEEEEEcC--CCCEEEEEeCC------------------CeEE
Q psy14130 186 PTAENVVASAGFDYLIILWDVGKGEALTVID-CHPDVINCLSFNR--DGSRLVTTCKD------------------KTVR 244 (494)
Q Consensus 186 p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~h~~~v~~l~~~~--~~~~l~s~~~d------------------~~v~ 244 (494)
++|..+++.-..+..|.+.|+.+.+..+.+. .....+..+...+ +-.+++..+.+ +.+.
T Consensus 97 yDGrylFVNDkan~RVAvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y~~~~t 176 (459)
T d1fwxa2 97 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 176 (459)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-EEEEEE
T ss_pred cceeEEEEEcCCCceEEEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCccccchhhcceEEE
Confidence 3675455566678999999999998766443 2345667777654 44577766653 2367
Q ss_pred EEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCC-----------C-----------------------CceE
Q psy14130 245 VLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRH-----------S-----------------------DRQV 290 (494)
Q Consensus 245 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~-----------~-----------------------d~~i 290 (494)
++|..+.+...++..... ...+.++++++.+++++|+.. . -+.+
T Consensus 177 ~ID~~tm~V~~QV~V~g~--ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~Gk~~eingV 254 (459)
T d1fwxa2 177 AVDADKWEVAWQVLVSGN--LDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGV 254 (459)
T ss_dssp EEETTTTEEEEEEEESSC--CCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTE
T ss_pred EEecCCceEEEEeeeCCC--hhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhcCCcEEeCCc
Confidence 889999887777665443 577889999888888875311 0 0223
Q ss_pred EEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCce--------EEecccccCCCCeeEE
Q psy14130 291 GLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPY--------IHFLNQSLSGAPQRGL 362 (494)
Q Consensus 291 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~--------~~~~~~~~~~~~v~~~ 362 (494)
.+-|.++......+..+........+..+|||++++++|..+.++.++|++.-... .....+...+-....-
T Consensus 255 ~VVD~~~~~~~~v~~yIPVpKsPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~~~~~~~~~e~elglgPLht 334 (459)
T d1fwxa2 255 KVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHT 334 (459)
T ss_dssp EEEECSGG--CSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-GGGGEEECCBCCSCEEEE
T ss_pred eeecccccCCcceeEEEecCCCCCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhcccCCccccEEeecccCcCcccc
Confidence 44454432111111122223345567899999999999999999999999632110 0011112223335667
Q ss_pred EEecCCceeee--ccceeEEEEeeC
Q psy14130 363 GFMPKRGCDVT--QCEIFRFFKLHT 385 (494)
Q Consensus 363 ~~~p~~~~~~~--~~~~~~~~~l~~ 385 (494)
+|..+|....+ -|+.+--|++..
T Consensus 335 ~fd~~g~aytslfids~v~kw~~~~ 359 (459)
T d1fwxa2 335 AFDGRGNAYTSLFLDSQVVKWNIED 359 (459)
T ss_dssp EECTTSEEEEEETTTTEEEEEEHHH
T ss_pred ccCCCceEEEEeeccceEEEEecch
Confidence 89888876666 499999999854
|
| >d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Nidogen species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.56 E-value=0.019 Score=49.23 Aligned_cols=181 Identities=7% Similarity=-0.094 Sum_probs=115.9
Q ss_pred cccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCC-C--eEEEEeCCCCc
Q psy14130 176 KRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKD-K--TVRVLDPRTGL 252 (494)
Q Consensus 176 ~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d-~--~v~iwd~~~~~ 252 (494)
...+.++++...+.++.++-...+.|.+.++........+......+..++.+|...+|+-.... + .|.--++....
T Consensus 78 ~~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~ 157 (263)
T d1npea_ 78 LGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN 157 (263)
T ss_dssp CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC
T ss_pred cccccEEEEeccCCeEEEeccCCCEEEEEecCCceEEEEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCC
Confidence 35678999987664566666677899999997655433344444678999999977766655432 2 34444555333
Q ss_pred eEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCC
Q psy14130 253 VISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGD 332 (494)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~d 332 (494)
. ..+....-..+..+++.+.+++++.+. ...+.|...|+.......... .......+++. +..||.+-...
T Consensus 158 ~-~~i~~~~~~~P~glaiD~~~~~lYw~d---~~~~~I~~~~~~g~~~~~v~~---~~~~P~~lav~--~~~lYwtd~~~ 228 (263)
T d1npea_ 158 R-RILAQDNLGLPNGLTFDAFSSQLCWVD---AGTHRAECLNPAQPGRRKVLE---GLQYPFAVTSY--GKNLYYTDWKT 228 (263)
T ss_dssp C-EEEECTTCSCEEEEEEETTTTEEEEEE---TTTTEEEEEETTEEEEEEEEE---CCCSEEEEEEE--TTEEEEEETTT
T ss_pred c-eeeeeecccccceEEEeecCcEEEEEe---CCCCEEEEEECCCCCeEEEEC---CCCCcEEEEEE--CCEEEEEECCC
Confidence 2 223222222367889988888898887 678899999987543222222 22334566664 67788888788
Q ss_pred CcEEEEEeeCCCceEEecccccCCCCeeEEEEecC
Q psy14130 333 GNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPK 367 (494)
Q Consensus 333 g~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 367 (494)
+.|...|..+++........ ......+++..++
T Consensus 229 ~~I~~~~~~~g~~~~~~~~~--~~~~~~gi~v~~~ 261 (263)
T d1npea_ 229 NSVIAMDLAISKEMDTFHPH--KQTRLYGITIALS 261 (263)
T ss_dssp TEEEEEETTTTEEEEEECCS--SCCCCCCEEEECS
T ss_pred CEEEEEECCCCccceEECCC--CCCCcceEEEeCC
Confidence 89999999888764333322 1234557777665
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.10 E-value=0.03 Score=47.96 Aligned_cols=94 Identities=17% Similarity=0.151 Sum_probs=62.4
Q ss_pred EcCC--CCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeC-C-----CeEEEEeCCCCceEE
Q psy14130 184 WHPT--AENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCK-D-----KTVRVLDPRTGLVIS 255 (494)
Q Consensus 184 ~~p~--~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~-d-----~~v~iwd~~~~~~~~ 255 (494)
.+|+ |+ .+|-.+ ++.|.+.|+.+++.. .+..+.+.+...+|+|||+.|+.... + ..|.+++..+++..+
T Consensus 6 ~sPdi~G~-~v~f~~-~~dl~~~d~~~g~~~-~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~ 82 (281)
T d1k32a2 6 LNPDIHGD-RIIFVC-CDDLWEHDLKSGSTR-KIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKR 82 (281)
T ss_dssp EEEEEETT-EEEEEE-TTEEEEEETTTCCEE-EEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEE
T ss_pred cCCCCCCC-EEEEEe-CCcEEEEECCCCCEE-EEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceEE
Confidence 4677 85 444443 467888899887754 56667788999999999999986542 2 247788888776443
Q ss_pred EeeecC------CCCceEEEEECCCCeEEEEE
Q psy14130 256 QGVCHP------GTRSSKAVFIGDTGRIVTTG 281 (494)
Q Consensus 256 ~~~~~~------~~~~~~~~~~~~~~~l~~~g 281 (494)
. ..+. ........|+|++..++.+.
T Consensus 83 l-t~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 113 (281)
T d1k32a2 83 I-TYFSGKSTGRRMFTDVAGFDPDGNLIISTD 113 (281)
T ss_dssp C-CCCCEEEETTEECSEEEEECTTCCEEEEEC
T ss_pred e-eecCCCccCccccccccccCCCCCEEEEEE
Confidence 2 1111 11145677999976666654
|
| >d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Low density lipoprotein (LDL) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.83 E-value=0.12 Score=44.17 Aligned_cols=168 Identities=9% Similarity=-0.126 Sum_probs=113.0
Q ss_pred cccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEe--CCCeEEEEeCCCCce
Q psy14130 176 KRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTC--KDKTVRVLDPRTGLV 253 (494)
Q Consensus 176 ~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~--~d~~v~iwd~~~~~~ 253 (494)
...+.++++.+.+.++..+-...+.|.+.++........+........+++.+|...+|.-.. ..+.|.-.++....
T Consensus 76 ~~~p~glAvD~~~~~lY~~d~~~~~I~v~~~~g~~~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~- 154 (266)
T d1ijqa1 76 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD- 154 (266)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC-
T ss_pred CCCcceEEEeeccceEEEEecCCCEEEeEecCCceEEEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCc-
Confidence 345667888877656777777778999999986665555555667789999999655555443 33567777776443
Q ss_pred EEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCC
Q psy14130 254 ISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDG 333 (494)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg 333 (494)
...+....-..+..++..+.+++++.+. ...+.|...|+....................+++. +..||.+-..++
T Consensus 155 ~~~l~~~~~~~p~gl~iD~~~~~lYw~d---~~~~~I~~~~~dG~~~~~~~~~~~~~~~p~~lav~--~~~ly~td~~~~ 229 (266)
T d1ijqa1 155 IYSLVTENIQWPNGITLDLLSGRLYWVD---SKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINE 229 (266)
T ss_dssp EEEEECSSCSCEEEEEEETTTTEEEEEE---TTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTT
T ss_pred eecccccccceeeEEEeeccccEEEEec---CCcCEEEEEECCCCCEEEEEeCCCcccccEEEEEE--CCEEEEEECCCC
Confidence 3333333323378899998888999987 67889999998764433322222222345556665 567878877888
Q ss_pred cEEEEEeeCCCceEEe
Q psy14130 334 NIRYYELTNERPYIHF 349 (494)
Q Consensus 334 ~i~~wd~~~~~~~~~~ 349 (494)
.|...+..+++.....
T Consensus 230 ~I~~~~~~~g~~~~~~ 245 (266)
T d1ijqa1 230 AIFSANRLTGSDVNLL 245 (266)
T ss_dssp EEEEEETTTCCCCEEE
T ss_pred eEEEEECCCCcceEEE
Confidence 8988888887654333
|
| >d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=96.46 E-value=0.24 Score=44.63 Aligned_cols=136 Identities=14% Similarity=0.152 Sum_probs=92.8
Q ss_pred eEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCC--------------------------------------C
Q psy14130 200 LIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKD--------------------------------------K 241 (494)
Q Consensus 200 ~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d--------------------------------------~ 241 (494)
.+.++|..+.+....+.. .+....+.++++|+++++.+.+ +
T Consensus 174 ~~t~ID~~tm~V~~QV~V-~g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~Gk~~ein 252 (459)
T d1fwxa2 174 VFTAVDADKWEVAWQVLV-SGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELN 252 (459)
T ss_dssp EEEEEETTTTEEEEEEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEET
T ss_pred EEEEEecCCceEEEEeee-CCChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhcCCcEEeC
Confidence 367889998887766652 3456689999999999988753 1
Q ss_pred eEEEEeCCCC---ceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCC-------ce--eEeeecC
Q psy14130 242 TVRVLDPRTG---LVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNT-------PL--ALETVDS 309 (494)
Q Consensus 242 ~v~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~-------~~--~~~~~~~ 309 (494)
.+.+-|.+.. ..+..+....+ ...+..+|++.+++++| ..+.++.|+|+++... +. .......
T Consensus 253 gV~VVD~~~~~~~~v~~yIPVpKs--PHGV~vSPDGKyi~VaG---KLs~tVSViD~~Ki~~~~~~~~~~~~~~~~e~el 327 (459)
T d1fwxa2 253 GVKVVDGRKEASSLFTRYIPIANN--PHGCNMAPDKKHLCVAG---KLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL 327 (459)
T ss_dssp TEEEEECSGG--CSSEEEEEEESS--CCCEEECTTSSEEEEEC---TTSSBEEEEEGGGHHHHHHSCC-GGGGEEECCBC
T ss_pred CceeecccccCCcceeEEEecCCC--CCceEECCCCCEEEEeC---CcCCcEEEEEehhhhhhhcccCCccccEEeeccc
Confidence 2344454431 12333333333 46788999999999999 8999999999864221 11 1122234
Q ss_pred CCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeC
Q psy14130 310 SSGVLFPYYDHDTRILFLAGKGDGNIRYYELTN 342 (494)
Q Consensus 310 ~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~ 342 (494)
.-+.+..+|+..| ..|.+---|..|.-|++..
T Consensus 328 glgPLht~fd~~g-~aytslfids~v~kw~~~~ 359 (459)
T d1fwxa2 328 GLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIED 359 (459)
T ss_dssp CSCEEEEEECTTS-EEEEEETTTTEEEEEEHHH
T ss_pred CcCccccccCCCc-eEEEEeeccceEEEEecch
Confidence 4567888999987 4558888999999999853
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=96.44 E-value=0.16 Score=45.55 Aligned_cols=140 Identities=16% Similarity=0.113 Sum_probs=80.5
Q ss_pred EEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCC-CeEEEEECCCCeEEEEecC-CCCceEEEEEc
Q psy14130 151 VKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFD-YLIILWDVGKGEALTVIDC-HPDVINCLSFN 228 (494)
Q Consensus 151 v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d-~~v~iwd~~~~~~~~~~~~-h~~~v~~l~~~ 228 (494)
+.+||..++.-.. .......|.......++.+++ .+++.|+.+ ..+.+||..+..-...-.. ....-.+++..
T Consensus 54 ~~~yd~~t~~w~~----~~~~~~~~~~~~~~~~~~~~g-~i~v~Gg~~~~~~~~yd~~~~~w~~~~~~~~~r~~~~~~~~ 128 (387)
T d1k3ia3 54 TSSWDPSTGIVSD----RTVTVTKHDMFCPGISMDGNG-QIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATM 128 (387)
T ss_dssp EEEECTTTCCBCC----CEEEECSCCCSSCEEEECTTS-CEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEEC
T ss_pred EEEEECCCCcEee----cCCCCCCcccceeEEEEecCC-cEEEeecCCCcceeEecCccCcccccccccccccccceeee
Confidence 7789998874321 111112233334466788998 688888765 5899999988764322111 11223456778
Q ss_pred CCCCEEEEEeCC------CeEEEEeCCCCceEEEeee---------cCC---CCceEEEEECCCCeEEEEEecCCCCceE
Q psy14130 229 RDGSRLVTTCKD------KTVRVLDPRTGLVISQGVC---------HPG---TRSSKAVFIGDTGRIVTTGFSRHSDRQV 290 (494)
Q Consensus 229 ~~~~~l~s~~~d------~~v~iwd~~~~~~~~~~~~---------~~~---~~~~~~~~~~~~~~l~~~g~~~~~d~~i 290 (494)
+||+.++.++.+ ..+.+||+.+.+-...-.. +.. .......+...++.++..| .....+
T Consensus 129 ~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~g---~~~~~~ 205 (387)
T d1k3ia3 129 SDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAG---PSTAMN 205 (387)
T ss_dssp TTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECC---SSSEEE
T ss_pred cCCceeeeccccccccccceeeeecCCCCceeecCCCcccccccccccceeeccceeEEEEeCCCCEEEec---CcCCcE
Confidence 899999988753 4689999988763211000 000 0011223333335666666 566777
Q ss_pred EEEeCCCC
Q psy14130 291 GLWDENDL 298 (494)
Q Consensus 291 ~iwd~~~~ 298 (494)
.++|..+.
T Consensus 206 ~~~~~~~~ 213 (387)
T d1k3ia3 206 WYYTSGSG 213 (387)
T ss_dssp EEECSTTC
T ss_pred EecCcccC
Confidence 77776653
|
| >d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Thermostable phytase (3-phytase) family: Thermostable phytase (3-phytase) domain: Thermostable phytase (3-phytase) species: Bacillus amyloliquefaciens [TaxId: 1390]
Probab=96.42 E-value=0.12 Score=45.76 Aligned_cols=154 Identities=14% Similarity=0.099 Sum_probs=90.8
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEE-----CCCCeEEEEEecCCC-CceEEEEeCCCCCCc
Q psy14130 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFI-----GDTGRIVTTGFSRHS-DRQVGLWDENDLNTP 301 (494)
Q Consensus 228 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~g~~~~~-d~~i~iwd~~~~~~~ 301 (494)
.|+.++++...+.+-|.+||+. |+.++.+... ++..+..- .....-++++.+++. ..+|.+|.+......
T Consensus 37 ~p~~SlI~gTdK~~Gl~vYdL~-G~~l~~~~~G---r~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~id~~~~~ 112 (353)
T d1h6la_ 37 NPQNSKLITTNKKSGLAVYSLE-GKMLHSYHTG---KLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT 112 (353)
T ss_dssp CGGGCEEEEEETTSCCEEEETT-CCEEEECCSS---CEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEETTTTE
T ss_pred CcCccEEEEEcCcCCEEEEcCC-CcEEEecccC---CcCccccccccccCCcceEEEEEeCCcCcceeEEEEEecCcccc
Confidence 3456788888888889999996 8877766432 24443322 122223444422221 236888876532221
Q ss_pred eeEee------ecCCCceEEeEE--eCC-CCEEEEEEeCCCcEEEEEeeC---CCceEEecccccCCCCeeEEEEecCCc
Q psy14130 302 LALET------VDSSSGVLFPYY--DHD-TRILFLAGKGDGNIRYYELTN---ERPYIHFLNQSLSGAPQRGLGFMPKRG 369 (494)
Q Consensus 302 ~~~~~------~~~~~~v~~~~~--~~~-~~~l~~~g~~dg~i~~wd~~~---~~~~~~~~~~~~~~~~v~~~~~~p~~~ 369 (494)
+.... ......+..+++ ++. +...+++...+|.+..|.+.. +......+..+..+..+.++++.+...
T Consensus 113 l~~~~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f~~~~q~EGCVvDde~~ 192 (353)
T d1h6la_ 113 LQSITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAFKMNSQTEGMAADDEYG 192 (353)
T ss_dssp EEECSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEEECSSCEEEEEEETTTT
T ss_pred cccccccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeeccCCCCccceEEEeCCCC
Confidence 11110 001122334444 665 444445666889999998853 333345555666678899999999877
Q ss_pred eeeeccceeEEEEeeC
Q psy14130 370 CDVTQCEIFRFFKLHT 385 (494)
Q Consensus 370 ~~~~~~~~~~~~~l~~ 385 (494)
.+..+.|...+|.+..
T Consensus 193 ~LyisEE~~Giw~~~a 208 (353)
T d1h6la_ 193 SLYIAEEDEAIWKFSA 208 (353)
T ss_dssp EEEEEETTTEEEEEES
T ss_pred cEEEecCccceEEEEe
Confidence 7777777778898865
|
| >d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Clathrin heavy-chain terminal domain family: Clathrin heavy-chain terminal domain domain: Clathrin heavy-chain terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.22 E-value=0.22 Score=42.44 Aligned_cols=134 Identities=11% Similarity=0.139 Sum_probs=92.0
Q ss_pred CeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEE
Q psy14130 199 YLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIV 278 (494)
Q Consensus 199 ~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 278 (494)
..|.|.|+..+.....-. -.--+.-.+|..+.|+--+ ..++.+||+++.+.+........ +.-..|..+ ..|.
T Consensus 45 ~~VvIidl~n~~~~~Rrp---i~AdsAIMhP~~~IiALra-g~~LQiFnletK~klks~~~~e~--VvfWkWis~-~~L~ 117 (327)
T d1utca2 45 AQVVIIDMNDPSNPIRRP---ISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDD--VTFWKWISL-NTVA 117 (327)
T ss_dssp EEEEEEETTSTTSCEEEE---CCCSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSC--CCEEEESSS-SEEE
T ss_pred ceEEEEECCCCCcceecc---cchhhhhcCCCCcEEEEec-CCeEEEEehhHhhhhceEEcCCC--cEEEEecCC-CEEE
Confidence 478888987654322211 1112455778888777666 56899999999988888776654 677888877 4554
Q ss_pred EEEecCCCCceEEEEeCCCCCCceeEeeec---CCCceEEeEEeCCCCEEEEEEe------CCCcEEEEEeeCCC
Q psy14130 279 TTGFSRHSDRQVGLWDENDLNTPLALETVD---SSSGVLFPYYDHDTRILFLAGK------GDGNIRYYELTNER 344 (494)
Q Consensus 279 ~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~g~------~dg~i~~wd~~~~~ 344 (494)
.+. +..|+-|+++....|....... ....|..-..+++.++++++|= -.|.+.+|..+...
T Consensus 118 lVT-----~taVYHW~~~g~s~P~k~fdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~~ 187 (327)
T d1utca2 118 LVT-----DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV 187 (327)
T ss_dssp EEC-----SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE
T ss_pred EEc-----CCceEEEcccCCCCchhhhhhcccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccCc
Confidence 444 7889999997655665543321 2356778888999999977752 24678888887653
|
| >d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Clathrin heavy-chain terminal domain family: Clathrin heavy-chain terminal domain domain: Clathrin heavy-chain terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=95.74 E-value=0.49 Score=40.22 Aligned_cols=185 Identities=12% Similarity=0.165 Sum_probs=116.1
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCC-CeEEEEecCCC----CceE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGK-GEALTVIDCHP----DVIN 223 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~-~~~~~~~~~h~----~~v~ 223 (494)
.++.|+|+++. +.+.... ....|.-=.|-.+ +.|+-.+ +..|+-|+++. ..+...+..|. ..|.
T Consensus 83 ~~LQiFnletK-------~klks~~-~~e~VvfWkWis~--~~L~lVT-~taVYHW~~~g~s~P~k~fdR~~~L~~~QII 151 (327)
T d1utca2 83 KTLQIFNIEMK-------SKMKAHT-MTDDVTFWKWISL--NTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQII 151 (327)
T ss_dssp TEEEEEETTTT-------EEEEEEE-CSSCCCEEEESSS--SEEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEE
T ss_pred CeEEEEehhHh-------hhhceEE-cCCCcEEEEecCC--CEEEEEc-CCceEEEcccCCCCchhhhhhcccccCceEE
Confidence 36999999988 5555544 2345666667655 3555555 45799999954 24666676553 4677
Q ss_pred EEEEcCCCCEEEEEe---C----CCeEEEEeCCCCceEEEeeecCCCCceEEEEE--CCCCeEEEEEecCCCCceEEEEe
Q psy14130 224 CLSFNRDGSRLVTTC---K----DKTVRVLDPRTGLVISQGVCHPGTRSSKAVFI--GDTGRIVTTGFSRHSDRQVGLWD 294 (494)
Q Consensus 224 ~l~~~~~~~~l~s~~---~----d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~g~~~~~d~~i~iwd 294 (494)
.-..+++.++++..+ . .|.+.+|..+.+ .-+.+.+|... ...+... ++...+++-+.-....+.++|-+
T Consensus 152 nY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~-~sQ~ieGhaa~-F~~~~~~g~~~~~~lf~fa~r~~~~~kLhIiE 229 (327)
T d1utca2 152 NYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAAS-FAQFKMEGNAEESTLFCFAVRGQAGGKLHIIE 229 (327)
T ss_dssp EEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEEE-EEEECCTTCSSCEEEEEEEEEETTEEEEEEEE
T ss_pred EEEECCCCCEEEEEeEecCCCceeEEEEEEEeccC-cCccccceeee-eEEEEcCCCCCCceEEEEEECCCCCcEEEEEE
Confidence 888888898776543 2 367899998754 46777787543 2222111 11224666553224457899999
Q ss_pred CCCCC---CceeEeee----cC---CCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceE
Q psy14130 295 ENDLN---TPLALETV----DS---SSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYI 347 (494)
Q Consensus 295 ~~~~~---~~~~~~~~----~~---~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~ 347 (494)
+.... .+...... .. ..-..++..++.-..+|+. +.-|.|++||+.++.++.
T Consensus 230 ig~~~~g~~~f~kk~vdi~fppea~~DFPvamqvs~kygiiyvi-TK~G~i~lyDleTgt~i~ 291 (327)
T d1utca2 230 VGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLI-TKYGYIHLYDLETGTCIY 291 (327)
T ss_dssp CSCCCTTCCCCCCEEEECCCCTTCTTCCEEEEEEETTTTEEEEE-ETTSEEEEEETTTCCEEE
T ss_pred cCCCccCCCCCcceeEEEECCccccCCcEEEEEeeccCCEEEEE-ecCcEEEEEEcccccEEE
Confidence 86532 22211111 11 2335667888888888665 478999999999998753
|
| >d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: Serum paraoxonase/arylesterase 1, PON1 domain: Serum paraoxonase/arylesterase 1, PON1 species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=95.37 E-value=0.8 Score=40.22 Aligned_cols=162 Identities=15% Similarity=0.063 Sum_probs=88.7
Q ss_pred CCeEEEEECCCCeE-EEE--ecCC-----CCceEEEEE--cCCCC-EEEEEe---CCCeEEEEeCCCCc--e--EEEeee
Q psy14130 198 DYLIILWDVGKGEA-LTV--IDCH-----PDVINCLSF--NRDGS-RLVTTC---KDKTVRVLDPRTGL--V--ISQGVC 259 (494)
Q Consensus 198 d~~v~iwd~~~~~~-~~~--~~~h-----~~~v~~l~~--~~~~~-~l~s~~---~d~~v~iwd~~~~~--~--~~~~~~ 259 (494)
.|.|.++|+.+... ... +.+. .-....+.. ..+|+ +|++.. ...+|.+|++.... . +.++..
T Consensus 67 ~G~i~~~dl~~~~~~~~~l~~~~~~~~~~~f~PhGi~l~~~~dg~~~L~vvnH~~~~~~ieif~~~~~~~~l~~~~~v~~ 146 (340)
T d1v04a_ 67 SGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRH 146 (340)
T ss_dssp CCEEEEEETTSSSCCEEECEEECSSSCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECC
T ss_pred CCeEEEEecCCCCCcceEEEecCCCCCCcceeccceeEEEcCCCcEEEEEEeccCCCceeEEEEEeCCCCeEEEEeecCC
Confidence 48899999876532 111 2211 112344443 44565 444443 45678888875443 1 223333
Q ss_pred cCCCCceEEEEECCCCeEEEEEe--------------cCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEE
Q psy14130 260 HPGTRSSKAVFIGDTGRIVTTGF--------------SRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRIL 325 (494)
Q Consensus 260 ~~~~~~~~~~~~~~~~~l~~~g~--------------~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 325 (494)
..-...+.++...+ +.++++-. .+..-+.+.-||... .... .+.....+.++++||+++|
T Consensus 147 ~~~~~pNDv~~~~~-g~fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~~~~~~~--~~~~---~~~l~~pNGI~~s~d~~~l 220 (340)
T d1v04a_ 147 KLLPSVNDIVAVGP-EHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPND--VRVV---AEGFDFANGINISPDGKYV 220 (340)
T ss_dssp TTCSSEEEEEEEET-TEEEEEESCSCCSHHHHHHHHHTTCCCEEEEEECSSC--EEEE---EEEESSEEEEEECTTSSEE
T ss_pred ccccCccceEEecC-CCEEEecCccCcChhhhhhhHhhcCCceeEEEEcCCc--eEEE---cCCCCccceeEECCCCCEE
Confidence 33333678888887 45666520 001123444454322 2111 1233457788999999999
Q ss_pred EEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEec
Q psy14130 326 FLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMP 366 (494)
Q Consensus 326 ~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p 366 (494)
|++-+..+.|+.|++...... .......-+...-.+.+.+
T Consensus 221 yVa~t~~~~i~~y~~~~~~~l-~~~~~~~l~~~pDNi~~d~ 260 (340)
T d1v04a_ 221 YIAELLAHKIHVYEKHANWTL-TPLRVLSFDTLVDNISVDP 260 (340)
T ss_dssp EEEEGGGTEEEEEEECTTSCE-EEEEEEECSSEEEEEEECT
T ss_pred EEEeCCCCeEEEEEeCCCccc-ceEEEecCCCCCCccEEec
Confidence 999999999999999865432 2222222234455566654
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=95.05 E-value=0.98 Score=42.80 Aligned_cols=135 Identities=12% Similarity=0.074 Sum_probs=81.8
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEEecCCC----------------------------------C--ceEEEEEcCCCCE
Q psy14130 190 NVVASAGFDYLIILWDVGKGEALTVIDCHP----------------------------------D--VINCLSFNRDGSR 233 (494)
Q Consensus 190 ~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~----------------------------------~--~v~~l~~~~~~~~ 233 (494)
..++.++.+|.+.++|..+++.+.....-. + .-...+++|+..+
T Consensus 315 ~~v~~~~k~G~~~~lDr~tG~~i~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~ 394 (560)
T d1kv9a2 315 KVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGL 394 (560)
T ss_dssp EEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTE
T ss_pred eeeeecCccceEEEEecCCCcccccccccccccccccChhhccccccccccccccceeeeeccccccccccccccCCCCe
Confidence 467788899999999999998765432100 0 0014556776666
Q ss_pred EEEEeC------------------------------------CCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeE
Q psy14130 234 LVTTCK------------------------------------DKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRI 277 (494)
Q Consensus 234 l~s~~~------------------------------------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 277 (494)
++.-.. .|.|.-||+.+++.+-+....... .... ....++ |
T Consensus 395 ~yvp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~G~l~A~D~~tGk~~W~~~~~~~~-~gg~-l~Tagg-l 471 (560)
T d1kv9a2 395 VYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHW-NGGT-LSTAGN-L 471 (560)
T ss_dssp EEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSSC-CCCE-EEETTT-E
T ss_pred eecccccccceeeccccccccccccccccCcccccCCCCcccccceEEEeCCCCeEeeeccCCCCC-CCce-eEECCC-E
Confidence 654332 256888999999987776544322 1122 222334 5
Q ss_pred EEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeC
Q psy14130 278 VTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKG 331 (494)
Q Consensus 278 ~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~ 331 (494)
+.+| +.|+.++-+|.++++..-....- ....-.-+.|..+|+..++..++
T Consensus 472 VF~G---~~dg~l~A~Da~tGe~LW~~~l~-~~~~~~P~ty~~dGkqyv~v~aG 521 (560)
T d1kv9a2 472 VFQG---TAAGQMHAYSADKGEALWQFEAQ-SGIVAAPMTFELAGRQYVAIMAG 521 (560)
T ss_dssp EEEE---CTTSEEEEEETTTCCEEEEEECS-SCCCSCCEEEEETTEEEEEEEEC
T ss_pred EEEE---CCCCcEEEEECCCCcEeEEEECC-CCccccCEEEEECCEEEEEEEeC
Confidence 5567 78999999999998765443322 21111225666788654344333
|
| >d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Comamonas testosteroni [TaxId: 285]
Probab=94.21 E-value=1.8 Score=40.97 Aligned_cols=78 Identities=13% Similarity=0.032 Sum_probs=46.7
Q ss_pred CeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeC
Q psy14130 241 KTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDH 320 (494)
Q Consensus 241 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~ 320 (494)
|.+.-||+.+|+.+-+....... .... .... +.++.+| +.|+.++.+|.++++..-....-.... -.-+.|..
T Consensus 457 G~l~AiD~~tGk~~W~~~~~~p~-~gg~-lsta-gglVF~G---~~dg~l~A~Da~TGe~LW~~~~~~~~~-~~P~ty~~ 529 (573)
T d1kb0a2 457 GRLLAWDPVAQKAAWSVEHVSPW-NGGT-LTTA-GNVVFQG---TADGRLVAYHAATGEKLWEAPTGTGVV-AAPSTYMV 529 (573)
T ss_dssp EEEEEEETTTTEEEEEEEESSSC-CCCE-EEET-TTEEEEE---CTTSEEEEEETTTCCEEEEEECSSCCC-SCCEEEEE
T ss_pred ccEEEeCCCCCceEeeecCCCCC-CCce-EEEc-CCEEEEE---CCCCeEEEEECCCCcEeEEEECCCCcc-ccCEEEEE
Confidence 36788899999987776654332 1111 2223 3455567 789999999999988754443221111 11245666
Q ss_pred CCCEE
Q psy14130 321 DTRIL 325 (494)
Q Consensus 321 ~~~~l 325 (494)
+|+..
T Consensus 530 ~GkQY 534 (573)
T d1kb0a2 530 DGRQY 534 (573)
T ss_dssp TTEEE
T ss_pred CCEEE
Confidence 88644
|
| >d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=94.01 E-value=1.6 Score=41.37 Aligned_cols=82 Identities=13% Similarity=0.025 Sum_probs=48.8
Q ss_pred CeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeC
Q psy14130 241 KTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDH 320 (494)
Q Consensus 241 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~ 320 (494)
|.|.-+|+.+|+.+-+....... ...... ..++ ++.+| +.|+.++-+|.++++..-.... .......-+.|..
T Consensus 444 G~l~AiD~~TG~~~W~~~~~~~~-~~g~l~-Tagg-lVf~G---~~dg~l~A~Da~tGe~lW~~~l-~~~~~a~P~ty~~ 516 (571)
T d2ad6a1 444 GQIRAFDLTTGKAKWTKWEKFAA-WGGTLY-TKGG-LVWYA---TLDGYLKALDNKDGKELWNFKM-PSGGIGSPMTYSF 516 (571)
T ss_dssp EEEEEECTTTCCEEEEEEESSCC-CSBCEE-ETTT-EEEEE---CTTSEEEEEETTTCCEEEEEEC-SSCCCSCCEEEEE
T ss_pred ccEEEeccCCCceeeEcCCCCCC-CcceeE-ecCC-EEEEE---CCCCeEEEEECCCCcEEEEEEC-CCCceecceEEEE
Confidence 46888899999977665433222 222222 2334 55567 7999999999999876444332 2222222356677
Q ss_pred CCCEEEEEE
Q psy14130 321 DTRILFLAG 329 (494)
Q Consensus 321 ~~~~l~~~g 329 (494)
||+..+++.
T Consensus 517 dGkqYi~v~ 525 (571)
T d2ad6a1 517 KGKQYIGSM 525 (571)
T ss_dssp TTEEEEEEE
T ss_pred CCEEEEEEE
Confidence 887654443
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=93.78 E-value=1.1 Score=39.67 Aligned_cols=114 Identities=20% Similarity=0.205 Sum_probs=64.4
Q ss_pred EEEcCCCCEEEEEeCC-----------CeEEEEeCCCCceEE--Eee-ecCCCCceEEEEECCCCeEEEEEecCCCCceE
Q psy14130 225 LSFNRDGSRLVTTCKD-----------KTVRVLDPRTGLVIS--QGV-CHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQV 290 (494)
Q Consensus 225 l~~~~~~~~l~s~~~d-----------~~v~iwd~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i 290 (494)
.....+|+.++.|+.+ ..+.+||+.+++-.. ... .+... ....++.++ +.+++.|. .....+
T Consensus 25 a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~-~~~~~~~~~-g~i~v~Gg--~~~~~~ 100 (387)
T d1k3ia3 25 AIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMF-CPGISMDGN-GQIVVTGG--NDAKKT 100 (387)
T ss_dssp EEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCS-SCEEEECTT-SCEEEECS--SSTTCE
T ss_pred EEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcccc-eeEEEEecC-CcEEEeec--CCCcce
Confidence 3344466666666632 137789999886322 222 22222 345667777 56777662 334689
Q ss_pred EEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCC------CcEEEEEeeCCC
Q psy14130 291 GLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGD------GNIRYYELTNER 344 (494)
Q Consensus 291 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~d------g~i~~wd~~~~~ 344 (494)
.+||..+... ...........-...+..+|++.+ +.|+.+ ..+.+||..+.+
T Consensus 101 ~~yd~~~~~w-~~~~~~~~~r~~~~~~~~~dG~v~-v~GG~~~~~~~~~~v~~yd~~~~~ 158 (387)
T d1k3ia3 101 SLYDSSSDSW-IPGPDMQVARGYQSSATMSDGRVF-TIGGSWSGGVFEKNGEVYSPSSKT 158 (387)
T ss_dssp EEEEGGGTEE-EECCCCSSCCSSCEEEECTTSCEE-EECCCCCSSSCCCCEEEEETTTTE
T ss_pred eEecCccCcc-cccccccccccccceeeecCCcee-eeccccccccccceeeeecCCCCc
Confidence 9999876332 111111122223346667888887 555432 358999988765
|
| >d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: Serum paraoxonase/arylesterase 1, PON1 domain: Serum paraoxonase/arylesterase 1, PON1 species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=93.64 E-value=2.1 Score=37.42 Aligned_cols=140 Identities=10% Similarity=-0.081 Sum_probs=81.1
Q ss_pred cCCCCCEEEEEe---CCCeEEEEECCCCe--E--EEEec-CCCCceEEEEEcCCCCEEEEEeC---------------CC
Q psy14130 185 HPTAENVVASAG---FDYLIILWDVGKGE--A--LTVID-CHPDVINCLSFNRDGSRLVTTCK---------------DK 241 (494)
Q Consensus 185 ~p~~~~~l~s~s---~d~~v~iwd~~~~~--~--~~~~~-~h~~~v~~l~~~~~~~~l~s~~~---------------d~ 241 (494)
.+++..+|+... ...+|.++++.... . +.++. ......+++++..+|++++|-.. -.
T Consensus 107 ~~dg~~~L~vvnH~~~~~~ieif~~~~~~~~l~~~~~v~~~~~~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e~~~~~~ 186 (340)
T d1v04a_ 107 DDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLA 186 (340)
T ss_dssp CTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCCSHHHHHHHHHTTCC
T ss_pred cCCCcEEEEEEeccCCCceeEEEEEeCCCCeEEEEeecCCccccCccceEEecCCCEEEecCccCcChhhhhhhHhhcCC
Confidence 455544555553 35678888875432 1 22232 12345789999999988888321 12
Q ss_pred eEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCC
Q psy14130 242 TVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHD 321 (494)
Q Consensus 242 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 321 (494)
...+|....++......+-. . .+.++++++++.++++- ...+.|++|++.............-....-.+.+++.
T Consensus 187 ~g~v~~~~~~~~~~~~~~l~-~-pNGI~~s~d~~~lyVa~---t~~~~i~~y~~~~~~~l~~~~~~~l~~~pDNi~~d~~ 261 (340)
T d1v04a_ 187 WSFVTYYSPNDVRVVAEGFD-F-ANGINISPDGKYVYIAE---LLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPV 261 (340)
T ss_dssp CEEEEEECSSCEEEEEEEES-S-EEEEEECTTSSEEEEEE---GGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTT
T ss_pred ceeEEEEcCCceEEEcCCCC-c-cceeEECCCCCEEEEEe---CCCCeEEEEEeCCCcccceEEEecCCCCCCccEEecC
Confidence 23344333333222222222 2 68999999988888887 7889999999875443333333334455666778775
Q ss_pred CCEEEEEE
Q psy14130 322 TRILFLAG 329 (494)
Q Consensus 322 ~~~l~~~g 329 (494)
+..+++++
T Consensus 262 ~g~lwva~ 269 (340)
T d1v04a_ 262 TGDLWVGC 269 (340)
T ss_dssp TCCEEEEE
T ss_pred CCEEEEEE
Confidence 54443443
|
| >d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Prolyl oligopeptidase, N-terminal domain domain: Prolyl oligopeptidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=93.52 E-value=2.6 Score=38.13 Aligned_cols=120 Identities=12% Similarity=0.060 Sum_probs=68.5
Q ss_pred ccccEEEEEEcCCCCCEEEEEeCCC----eEEEEECCCCeEEE-EecCCCCceEEEEEcCCCCEEEEEeCC---------
Q psy14130 175 HKRRVGYIEWHPTAENVVASAGFDY----LIILWDVGKGEALT-VIDCHPDVINCLSFNRDGSRLVTTCKD--------- 240 (494)
Q Consensus 175 h~~~V~~~~~~p~~~~~l~s~s~d~----~v~iwd~~~~~~~~-~~~~h~~~v~~l~~~~~~~~l~s~~~d--------- 240 (494)
+.-.+...+++|++..++++-+.+| .+++.|+.+++.+. .+.. ....+++|.+|++.|+-...|
T Consensus 123 ~~~~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i~~--~~~~~~~W~~D~~~~~Y~~~~~~~~~~~~~ 200 (430)
T d1qfma1 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER--VKFSCMAWTHDGKGMFYNAYPQQDGKSDGT 200 (430)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE--ECSCCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred ccceecceEecCCCCEEEEEeccccCchheeEEeccCcceeccccccc--ccccceEEcCCCCEEEEEEeccccCccccc
Confidence 3344556788999955555555444 79999999998654 2321 112468899999987765432
Q ss_pred -------CeEEEEeCCCCce--EEEeeecCCC-CceEEEEECCCCeEEEEEecCCCCc--eEEEEeCCC
Q psy14130 241 -------KTVRVLDPRTGLV--ISQGVCHPGT-RSSKAVFIGDTGRIVTTGFSRHSDR--QVGLWDEND 297 (494)
Q Consensus 241 -------~~v~iwd~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~l~~~g~~~~~d~--~i~iwd~~~ 297 (494)
..|..+.+.+... +..+...... ....+..+.++..++....+ ..+. .+.+.|+..
T Consensus 201 ~~~~~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~~~~-~~~~~~~~~~~d~~~ 268 (430)
T d1qfma1 201 ETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIRE-GCDPVNRLWYCDLQQ 268 (430)
T ss_dssp CCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEEC-SSSSCCEEEEEEGGG
T ss_pred ccccCCcceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeEEeec-cCCccEEEEEeeCCC
Confidence 3688888877642 2223322222 13344456665555544321 2233 345556543
|
| >d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Ethanol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=92.32 E-value=2 Score=40.78 Aligned_cols=78 Identities=18% Similarity=0.170 Sum_probs=50.0
Q ss_pred CeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeC
Q psy14130 241 KTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDH 320 (494)
Q Consensus 241 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~ 320 (494)
|.|.-+|+.+|+.+-+...+... .... ....++ ++.+| +.|+.++-+|.++++..-.... .....-.-+.|..
T Consensus 466 G~l~AiD~~TG~i~W~~~~~~p~-~~g~-lstagg-lVF~G---t~dg~l~A~Da~TGe~LW~~~~-~~~~~~~P~ty~~ 538 (582)
T d1flga_ 466 GSLRAMDPVSGKVVWEHKEHLPL-WAGV-LATAGN-LVFTG---TGDGYFKAFDAKSGKELWKFQT-GSGIVSPPITWEQ 538 (582)
T ss_dssp EEEEEECTTTCCEEEEEEESSCC-CSCC-EEETTT-EEEEE---CTTSEEEEEETTTCCEEEEEEC-SSCCCSCCEEEEE
T ss_pred CeEEEEcCCCCcEEeecCCCCCC-ccce-eEEcCC-eEEEe---CCCCeEEEEECCCCcEeEEEEC-CCCccccCEEEEE
Confidence 67888999999988777655433 2222 223334 55567 7899999999999887544432 2222222356778
Q ss_pred CCCEE
Q psy14130 321 DTRIL 325 (494)
Q Consensus 321 ~~~~l 325 (494)
+|+..
T Consensus 539 ~G~qY 543 (582)
T d1flga_ 539 DGEQY 543 (582)
T ss_dssp TTEEE
T ss_pred CCEEE
Confidence 88654
|
| >d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Ethanol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=92.16 E-value=0.23 Score=47.67 Aligned_cols=81 Identities=14% Similarity=0.063 Sum_probs=57.8
Q ss_pred CeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEE
Q psy14130 199 YLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIV 278 (494)
Q Consensus 199 ~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 278 (494)
|.|.-+|+.+|+.+.....+ .++.+-..+..|.+++.|+.|+.++.+|.++|+.+-++.......-.-+.|..++.+++
T Consensus 466 G~l~AiD~~TG~i~W~~~~~-~p~~~g~lstagglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~G~qYv 544 (582)
T d1flga_ 466 GSLRAMDPVSGKVVWEHKEH-LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYL 544 (582)
T ss_dssp EEEEEECTTTCCEEEEEEES-SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred CeEEEEcCCCCcEEeecCCC-CCCccceeEEcCCeEEEeCCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCEEEE
Confidence 57888898999887776532 22222122345778888999999999999999999888766555445577777766655
Q ss_pred EE
Q psy14130 279 TT 280 (494)
Q Consensus 279 ~~ 280 (494)
+.
T Consensus 545 ~i 546 (582)
T d1flga_ 545 GV 546 (582)
T ss_dssp EE
T ss_pred EE
Confidence 44
|
| >d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Comamonas testosteroni [TaxId: 285]
Probab=91.75 E-value=0.28 Score=46.90 Aligned_cols=81 Identities=14% Similarity=0.167 Sum_probs=56.5
Q ss_pred CeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEE
Q psy14130 199 YLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIV 278 (494)
Q Consensus 199 ~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 278 (494)
|.+.-||+.+++.+...... .+..+=...-.|.+++.|+.|+.++.+|.++|+.+-++....+..-.-+.|..++.+++
T Consensus 457 G~l~AiD~~tGk~~W~~~~~-~p~~gg~lstagglVF~G~~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~GkQYv 535 (573)
T d1kb0a2 457 GRLLAWDPVAQKAAWSVEHV-SPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYV 535 (573)
T ss_dssp EEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred ccEEEeCCCCCceEeeecCC-CCCCCceEEEcCCEEEEECCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCEEEE
Confidence 46889999999988877532 22211112335778889999999999999999999888765544334466666755554
Q ss_pred EE
Q psy14130 279 TT 280 (494)
Q Consensus 279 ~~ 280 (494)
+.
T Consensus 536 ~v 537 (573)
T d1kb0a2 536 SV 537 (573)
T ss_dssp EE
T ss_pred EE
Confidence 44
|
| >d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=91.62 E-value=0.35 Score=46.21 Aligned_cols=82 Identities=13% Similarity=-0.007 Sum_probs=54.9
Q ss_pred CeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEE
Q psy14130 199 YLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIV 278 (494)
Q Consensus 199 ~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 278 (494)
|.|.-+|+.+++.+.+... .....+=...-.+.++++++.|+.++.+|.++|+.+-++.........-+.|..++..++
T Consensus 444 G~l~AiD~~TG~~~W~~~~-~~~~~~g~l~TagglVf~G~~dg~l~A~Da~tGe~lW~~~l~~~~~a~P~ty~~dGkqYi 522 (571)
T d2ad6a1 444 GQIRAFDLTTGKAKWTKWE-KFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYI 522 (571)
T ss_dssp EEEEEECTTTCCEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred ccEEEeccCCCceeeEcCC-CCCCCcceeEecCCEEEEECCCCeEEEEECCCCcEEEEEECCCCceecceEEEECCEEEE
Confidence 4677788888887766541 111111111224668888999999999999999999888765554345577777766666
Q ss_pred EEE
Q psy14130 279 TTG 281 (494)
Q Consensus 279 ~~g 281 (494)
++.
T Consensus 523 ~v~ 525 (571)
T d2ad6a1 523 GSM 525 (571)
T ss_dssp EEE
T ss_pred EEE
Confidence 553
|
| >d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylobacterium extorquens [TaxId: 408]
Probab=91.03 E-value=0.23 Score=47.78 Aligned_cols=81 Identities=11% Similarity=-0.002 Sum_probs=56.4
Q ss_pred CeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEE
Q psy14130 199 YLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIV 278 (494)
Q Consensus 199 ~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 278 (494)
|.|.-||+.+++.+.... +...+.+=..+..|.+++.|+.||.++.+|.++|+.+-++....+....-+.|.-++.+++
T Consensus 453 G~l~A~D~~TG~~~W~~~-~~~~~~gg~lsTagglVF~G~~Dg~l~A~Da~TGe~LW~~~~~~~~~a~P~tY~~dGkQYv 531 (596)
T d1w6sa_ 453 GQIKAYNAITGDYKWEKM-ERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQYV 531 (596)
T ss_dssp EEEEEECTTTCCEEEEEE-ESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred ceEEEEeCCCCceecccC-CCCCCccceeEecCCEEEEECCCCeEEEEECCCCcEeeEEECCCCcccCCeEEEECCEEEE
Confidence 578888998888776553 2222222222335778888999999999999999999888766554445566777766655
Q ss_pred EE
Q psy14130 279 TT 280 (494)
Q Consensus 279 ~~ 280 (494)
+.
T Consensus 532 av 533 (596)
T d1w6sa_ 532 AI 533 (596)
T ss_dssp EE
T ss_pred EE
Confidence 54
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=90.93 E-value=0.39 Score=45.74 Aligned_cols=81 Identities=15% Similarity=0.141 Sum_probs=56.8
Q ss_pred CeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEE
Q psy14130 199 YLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIV 278 (494)
Q Consensus 199 ~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 278 (494)
|.+.-||+.+++.+..... .....+-...-.+.+++.|+.||.++.+|.++|+.+-++.......-.-+.|..++.+++
T Consensus 438 G~l~A~D~~tGk~~W~~~~-~~~~~gg~l~TagglVF~G~~dg~l~A~Da~tGe~LW~~~l~~~~~~~P~ty~~dGkqyv 516 (560)
T d1kv9a2 438 GALLAWDPVKQKAAWKVPY-PTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQYV 516 (560)
T ss_dssp EEEEEEETTTTEEEEEEEE-SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred cceEEEeCCCCeEeeeccC-CCCCCCceeEECCCEEEEECCCCcEEEEECCCCcEeEEEECCCCccccCEEEEECCEEEE
Confidence 5788899999998877652 222222222335678889999999999999999999888766554344566666765555
Q ss_pred EE
Q psy14130 279 TT 280 (494)
Q Consensus 279 ~~ 280 (494)
++
T Consensus 517 ~v 518 (560)
T d1kv9a2 517 AI 518 (560)
T ss_dssp EE
T ss_pred EE
Confidence 54
|
| >d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nucleoporin domain family: Nucleoporin domain domain: Nucleoporin NUP159 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=90.58 E-value=5.2 Score=35.21 Aligned_cols=177 Identities=7% Similarity=0.022 Sum_probs=97.8
Q ss_pred cEEEEEEcCCCCCEEEEEeCCCeEEEEECC-----------CCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEE
Q psy14130 178 RVGYIEWHPTAENVVASAGFDYLIILWDVG-----------KGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVL 246 (494)
Q Consensus 178 ~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~-----------~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iw 246 (494)
...-++.++.. .+++.|+.++ ++|-.+. ......... -..|..++|+.+ .|+.. .++.+..+
T Consensus 38 ~~~LLAVsn~~-GLl~aa~~~~-l~V~~t~~l~~~~~~~~~~~~~~~~~~--ip~v~~vafs~d--~l~v~-~~~~l~~~ 110 (381)
T d1xipa_ 38 SLQNLDISNSK-SLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKE--IPDVIFVCFHGD--QVLVS-TRNALYSL 110 (381)
T ss_dssp CCBCEEEETTT-TEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEE--CTTEEEEEEETT--EEEEE-ESSEEEEE
T ss_pred ccceEEEeCCC-CEEEEECCCE-EEEEEHHHHHHHhhccCCCCcceeccC--CCCeEEEEeeCC--EEEEE-eCCCEEEE
Confidence 34578888876 4888888775 5666532 111111111 136889999754 45444 45578888
Q ss_pred eCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeE---eeecCCCceEEeEEeCCCC
Q psy14130 247 DPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLAL---ETVDSSSGVLFPYYDHDTR 323 (494)
Q Consensus 247 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~---~~~~~~~~v~~~~~~~~~~ 323 (494)
+..+-........-... +..+.++|. .++... .++.+.++++.+....... ....-...+.+++|++.|.
T Consensus 111 ~~~~l~~~~~~~~~~~~-~~~~~~~p~--~~~l~~----~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~ws~kgk 183 (381)
T d1xipa_ 111 DLEELSEFRTVTSFEKP-VFQLKNVNN--TLVILN----SVNDLSALDLRTKSTKQLAQNVTSFDVTNSQLAVLLKDRSF 183 (381)
T ss_dssp ESSSTTCEEEEEECSSC-EEEEEECSS--EEEEEE----TTSEEEEEETTTCCEEEEEESEEEEEECSSEEEEEETTSCE
T ss_pred Eeecccccccccccccc-ccceecCCc--eeEEEe----cCCCEEEEEeccCccccccCCcceEEecCCceEEEEeCCcE
Confidence 87765433333333333 667777664 455554 6899999999876432111 1122335677788887777
Q ss_pred EEEEEEeCCCcEEE-EEeeCCCceEEecccccCCCCeeEEEEecCCceeee
Q psy14130 324 ILFLAGKGDGNIRY-YELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVT 373 (494)
Q Consensus 324 ~l~~~g~~dg~i~~-wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~ 373 (494)
.+ +++.+++ ..+ -++.....+ -........+.++.|..+..+++.
T Consensus 184 q~-v~~~g~~-~q~k~~i~~~~~~---~~p~~~~~~v~sI~WL~~~~F~vv 229 (381)
T d1xipa_ 184 QS-FAWRNGE-MEKQFEFSLPSEL---EELPVEEYSPLSVTILSPQDFLAV 229 (381)
T ss_dssp EE-EEEETTE-EEEEEEECCCHHH---HTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EE-EEeCCCc-eeeccCCCCcccc---CCCcCCCcceeEEEEecCceEEEE
Confidence 77 5553332 111 122111100 000112346889999988777664
|
| >d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Thermostable phytase (3-phytase) family: Thermostable phytase (3-phytase) domain: Thermostable phytase (3-phytase) species: Bacillus amyloliquefaciens [TaxId: 1390]
Probab=88.66 E-value=7 Score=33.95 Aligned_cols=189 Identities=9% Similarity=0.062 Sum_probs=106.2
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc------CCCCEEEEEe-CC---CeEEEEeCCC-CceEEEee
Q psy14130 190 NVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN------RDGSRLVTTC-KD---KTVRVLDPRT-GLVISQGV 258 (494)
Q Consensus 190 ~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~------~~~~~l~s~~-~d---~~v~iwd~~~-~~~~~~~~ 258 (494)
.+++.....+-|.+||+. |+.+..+. .+.++.|..- ....-|+.++ .+ .+|.+|.+.. ...+..+.
T Consensus 41 SlI~gTdK~~Gl~vYdL~-G~~l~~~~--~Gr~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~id~~~~~l~~~~ 117 (353)
T d1h6la_ 41 SKLITTNKKSGLAVYSLE-GKMLHSYH--TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSIT 117 (353)
T ss_dssp CEEEEEETTSCCEEEETT-CCEEEECC--SSCEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEETTTTEEEECS
T ss_pred cEEEEEcCcCCEEEEcCC-CcEEEecc--cCCcCccccccccccCCcceEEEEEeCCcCcceeEEEEEecCccccccccc
Confidence 466666666679999994 87777765 3556555543 2222355555 22 3687887642 22333332
Q ss_pred ecC------CCCceEEEE--ECCCCe-EEEEEecCCCCceEEEEeCCCCCC----ceeEeeecCCCceEEeEEeCCCCEE
Q psy14130 259 CHP------GTRSSKAVF--IGDTGR-IVTTGFSRHSDRQVGLWDENDLNT----PLALETVDSSSGVLFPYYDHDTRIL 325 (494)
Q Consensus 259 ~~~------~~~~~~~~~--~~~~~~-l~~~g~~~~~d~~i~iwd~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l 325 (494)
... ...+..++. .+.++. .+.+. ..+|.+..|.+..... ......+.....+..+.++...+.|
T Consensus 118 ~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~---~k~G~v~q~~l~~~~~g~v~~~lvr~f~~~~q~EGCVvDde~~~L 194 (353)
T d1h6la_ 118 DPNRPIASAIDEVYGFSLYHSQKTGKYYAMVT---GKEGEFEQYELNADKNGYISGKKVRAFKMNSQTEGMAADDEYGSL 194 (353)
T ss_dssp CSSSCEECSSSSCCCEEEEECTTTCCEEEEEE---CSSSEEEEEEEEECTTSSEEEEEEEEEECSSCEEEEEEETTTTEE
T ss_pred ccccccccccCcceEEEEEecCCCCeEEEEEE---cCCceEEEEEEEcCCCCceeeEeeeccCCCCccceEEEeCCCCcE
Confidence 211 112455554 455454 34444 5789998887643221 2233345556788899999999999
Q ss_pred EEEEeCCCcEEEEEeeCC--C--ceEEecccccCCCCeeEEEEec----CCceeee--ccceeEEEEeeC
Q psy14130 326 FLAGKGDGNIRYYELTNE--R--PYIHFLNQSLSGAPQRGLGFMP----KRGCDVT--QCEIFRFFKLHT 385 (494)
Q Consensus 326 ~~~g~~dg~i~~wd~~~~--~--~~~~~~~~~~~~~~v~~~~~~p----~~~~~~~--~~~~~~~~~l~~ 385 (494)
|++ -++.-|..++.... . .+......-.-..-+.+|+.-. +|-++++ ++....+|+...
T Consensus 195 yis-EE~~Giw~~~a~~~~~~~~~~i~~~~g~~l~~D~EGlaiy~~~~~~GylivSsQG~n~f~vydr~~ 263 (353)
T d1h6la_ 195 YIA-EEDEAIWKFSAEPDGGSNGTVIDRADGRHLTPDIEGLTIYYAADGKGYLLASSQGNSSYAIYERQG 263 (353)
T ss_dssp EEE-ETTTEEEEEESSTTSCSCCEEEEECSSSSCCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESST
T ss_pred EEe-cCccceEEEEeccCCCccceeeecccCccccCCccccEEEEcCCCCeEEEEEcCCCCeEEEEecCC
Confidence 664 46655655555422 1 1111111111245688888653 2344555 377888888765
|
| >d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Soluble quinoprotein glucose dehydrogenase family: Soluble quinoprotein glucose dehydrogenase domain: Soluble quinoprotein glucose dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=88.37 E-value=8.7 Score=34.69 Aligned_cols=55 Identities=15% Similarity=0.092 Sum_probs=37.6
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEee-------ecCCCCceEEEEECC
Q psy14130 219 PDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGV-------CHPGTRSSKAVFIGD 273 (494)
Q Consensus 219 ~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~-------~~~~~~~~~~~~~~~ 273 (494)
-...++|+|.|||++|++--.+|+|++++..+++...... .+...-...++++|+
T Consensus 26 L~~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pd 87 (450)
T d1crua_ 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (450)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CCCceEEEEeCCCeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCC
Confidence 4567899999999988876567999999988876332221 111112467888874
|
| >d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Soluble quinoprotein glucose dehydrogenase family: Soluble quinoprotein glucose dehydrogenase domain: Soluble quinoprotein glucose dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=86.47 E-value=11 Score=33.91 Aligned_cols=53 Identities=11% Similarity=0.140 Sum_probs=38.1
Q ss_pred ccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEE--EEec------CCCCceEEEEEcCC
Q psy14130 177 RRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEAL--TVID------CHPDVINCLSFNRD 230 (494)
Q Consensus 177 ~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~--~~~~------~h~~~v~~l~~~~~ 230 (494)
..-++|+|.|++ .+|++--.+|.|++++..+++.. ..+. .-++....|+|+|+
T Consensus 27 ~~P~~la~~pdg-~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pd 87 (450)
T d1crua_ 27 NKPHALLWGPDN-QIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (450)
T ss_dssp SSEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CCceEEEEeCCC-eEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCC
Confidence 356799999998 67777655799999998777543 2221 12356789999995
|
| >d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylobacterium extorquens [TaxId: 408]
Probab=83.28 E-value=19 Score=33.76 Aligned_cols=58 Identities=26% Similarity=0.286 Sum_probs=39.4
Q ss_pred CeEEEEECCCCeEEEEecC--CC-------CceEEEEE-cCCCC---EEEEEeCCCeEEEEeCCCCceEEE
Q psy14130 199 YLIILWDVGKGEALTVIDC--HP-------DVINCLSF-NRDGS---RLVTTCKDKTVRVLDPRTGLVISQ 256 (494)
Q Consensus 199 ~~v~iwd~~~~~~~~~~~~--h~-------~~v~~l~~-~~~~~---~l~s~~~d~~v~iwd~~~~~~~~~ 256 (494)
..|.-.|+.+|+.+..++. |. ....-+.. ..+|+ .++...++|.+.++|..+|+++..
T Consensus 278 ~sivAlD~~TG~~~W~~Q~~~~D~Wd~d~~~~~~l~d~~~~~G~~~~~v~~~~k~G~~~vlDr~tG~~i~~ 348 (596)
T d1w6sa_ 278 MTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSA 348 (596)
T ss_dssp SEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEE
T ss_pred ccccccccccccccccccceeccccCCccccceeeeeccccccccccceeccccccceeeecCCCCceeee
Confidence 4577889999998887763 21 11111221 23443 677889999999999999997654
|
| >d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Acylamino-acid-releasing enzyme, N-terminal donain domain: Acylamino-acid-releasing enzyme, N-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=81.59 E-value=11 Score=29.90 Aligned_cols=144 Identities=18% Similarity=0.184 Sum_probs=81.0
Q ss_pred ccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEE--EEecC-------CCCceEEEEEcC-CCCEEEEEeC-CCeEEE
Q psy14130 177 RRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEAL--TVIDC-------HPDVINCLSFNR-DGSRLVTTCK-DKTVRV 245 (494)
Q Consensus 177 ~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~--~~~~~-------h~~~v~~l~~~~-~~~~l~s~~~-d~~v~i 245 (494)
-+|.+++... +++.++|+......+|-++.|+.. ..+.+ ..+.|..+.+-. ..+-+.++.- .|.++|
T Consensus 104 vRI~S~~ydd--k~vvF~Gased~~~LYviegGklrkL~~vPpFsFVtDI~~d~I~G~g~~~g~~~sfF~adl~SG~lri 181 (313)
T d2hu7a1 104 MRILSGVDTG--EAVVFTGATEDRVALYALDGGGLRELARLPGFGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRV 181 (313)
T ss_dssp BEEEEEEECS--SCEEEEEECSSCEEEEEEETTEEEEEEEESSCEEEEEEETTEEEEEEEEETTEEEEEEEETTTEEEEE
T ss_pred EEEEEeeecC--ceEEEecccCCceEEEEEeCCceeeeccCCCcceEEeccCCeEEEEeeecCCcceEEEEecccCCEEE
Confidence 4566666654 478999988888888888877642 23322 123444444432 3333555554 677777
Q ss_pred EeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec-------CCCceEEeEE
Q psy14130 246 LDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD-------SSSGVLFPYY 318 (494)
Q Consensus 246 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~-------~~~~v~~~~~ 318 (494)
++...|.. +...+++. .++ ++++..-.+....-+|+++..- ....+. ....+.-+.|
T Consensus 182 ~tpkeGS~------------~~ay~~~g-nKV-~sdyEt~gEsywit~D~~s~~y--erve~P~kd~~sy~p~~I~~~~Y 245 (313)
T d2hu7a1 182 FDSGEGSF------------SSASISPG-MKV-TAGLETAREARLVTVDPRDGSV--EDLELPSKDFSSYRPTAITWLGY 245 (313)
T ss_dssp ECCSSEEE------------EEEEECTT-SCE-EEEEEESSCEEEEEECTTTCCE--EECCCSSCHHHHHCCSEEEEEEE
T ss_pred ecCCCCcc------------cceeEccC-cee-eeccCCCCceEEEEEecccCce--eeeecCcccceeecceEEEeeee
Confidence 77766543 22223332 333 4444322233333457765321 111111 2234666789
Q ss_pred eCCCCEEEEEEeCCCcEEEEE
Q psy14130 319 DHDTRILFLAGKGDGNIRYYE 339 (494)
Q Consensus 319 ~~~~~~l~~~g~~dg~i~~wd 339 (494)
.|+++.+ +.+..||.-++|.
T Consensus 246 ~Pdd~L~-iiakrdG~s~lF~ 265 (313)
T d2hu7a1 246 LPDGRLA-VVARREGRSAVFI 265 (313)
T ss_dssp CTTSCEE-EEEEETTEEEEEE
T ss_pred CCCCcEE-EEEecCCchheee
Confidence 9999997 6678999999886
|