Psyllid ID: psy14511

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------49
Protein Sequence
MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKARQVGSGSSLEFAILKQPVSLTALLRSRAVEKQQHAIAYTVFGEAV
Secondary Structure (PSIPRED)
ccccccEEEEEEccccEEEEEcccccccccccccccccEEEEEEcccccEEEEEccccEEEEEcccccccccccccccccccEEEEEEccccccEEEEEcccccccEEEEEcccccEEEEEcccccccccEEEccccccccEEEEEEEcccccccEEEEEcccccccccccccccccccEEEcccccEEEEccccccccEEEEEEccccEEEEEEccccEEEEEcccccEEEEEEccccccccEEEEEEcccccEEEEEEcccccEEEEEcccccEEcccccccccEEEEEccccEEEEEEccccEEEcccccccccccccccccccEEEEEEcccccEEEEEccccEEEEEcccccccccccEEEEEEcccccEEEEEcccccccEEEEEccccEEEEEEccccccEEEEEEcccccEEEEEEccccEEEEEcccccccEEEEEEccccEEEEEEEEccccccEEEEEcccccEEEEEEEccccEEc
Secondary Structure Prediction (SSPRO)
ccccccEEEEEccccEEEEEEcccccEEEEEcccccccEEEEEEcccccEEEEccccEEEEEEcccccccEEEEEcccccccEEEEEEcccccEEEEEcccccccEEEEEEcccccEEEEEEcccccEEEEEEccccccccccccEEEEEccccEEEEEEcccccEEEEEEEccccccEEEEEEcccccEEEEcccccEEEEEEEcccccEEEEccccEEEEEEcccccEEEEEEccccccccEEEEEEcccccEEEEEEccccEEEEEEcccccEEEEEccccccEEEEcccccEEEEEccccEEEEEEcccccEEEEEEccccccEEEEEEcccccEEEEccccEEEEEEcccccEEEEccccEEEEEEccccEEEEEcccccEEEEEEcccccEEEEEccccccEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEEccccccEEEEEcccccccccccccEEEEEcccccEEEEEccccc
Coil and Loop (DISEMBL)
mcwngnllscgtiggnilhydvrthsdyptaitregdvvcglkwspngrylasgsnntvKIWDfrqldakrpqvnnqchlsavkaiawcpweptllatgggicdQTVRLWnsmngkekchvktdsqqandETISYREQKKRRHLSFLLHGFEIDRKKVlnqskrtvsptqflrtlgklprkvkakperileapsiindfytsgldwgyhDTLAVALDTSVytwntktnktqllveyptydnayiscvawkprttdlavTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWngnllscgtiggnilhydvrthsdyptaitregdvvcglkwspngrylasgsnntvKIWDFrqldakrplglivpKLKREGRELvtshgkqdcslkmweyprLHLIEELKIHQERILsavlspdqtCVAAASADEtisiwncfprdkkrkarqvgsgsslefailKQPVSLTALLRSRAVEKQQHAIAYTVFGEAV
Flexible Loop (DISEMBL)
MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKchvktdsqqandetISYREQKKRRHLSFLLhgfeidrkkvlnqskrtvsptqflrtlgklprkvkakperileapsiINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFrqldakrplglivpklkregrelvtshgkqdcslkmWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAasadetisiwncfprdkKRKARQVgsgsslefailkqPVSLTALLRSRAVEKQQHAIAYTVFGEAV
Low Complexity Region (SEG)
MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKARQVGSGSSLEFAILKQPVSLTALLRSRAVEKQQHAIAYTVFGEAV
Disordered region (IsUnstruct)
*CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNG***************************HLSFLLHGFEIDRKKVLN********TQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPR**************LEFAILKQPVSLTALLRSRAVEKQQHAIAYTVF****
Disordered Region (DISOPRED)
MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFP**************SLEFAILKQPVSLTALLRSRAVEKQQHAIAYTVFGEA*
Disordered Region (DISEMBL)
MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKE**************TISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRD***********SSLEFAILKQPVSLTALLRSRAVEKQQHAIAYTVFGEAV
Disordered Region (DISPRO)
****GNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKARQVGSGSSLEFAILKQPVSLTALLRSRAVEKQQHAIAYTVFG***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKARQVGSGSSLEFAILKQPVSLTALLRSRAVEKQQHAIAYTVFGEAV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	488	2.2.26 [Sep-21-2011]
Q5H7C0	499	Cell division cycle prote	yes	N/A	0.676	0.661	0.293	5e-41
Q12834	499	Cell division cycle prote	yes	N/A	0.676	0.661	0.293	2e-40
Q54MZ3	499	Anaphase-promoting comple	yes	N/A	0.590	0.577	0.3	1e-37
Q9JJ66	499	Cell division cycle prote	yes	N/A	0.651	0.637	0.290	1e-34
Q62623	499	Cell division cycle prote	yes	N/A	0.604	0.591	0.298	7e-34
O94423	421	Meiotic fizzy-related pro	yes	N/A	0.633	0.733	0.266	6e-31
Q8L3Z8	483	Protein FIZZY-RELATED 2 O	no	N/A	0.551	0.556	0.278	5e-27
P53197	566	APC/C activator protein C	yes	N/A	0.606	0.522	0.280	1e-26
Q54KM3	754	Anaphase-promoting comple	no	N/A	0.370	0.240	0.372	3e-26
O13286	556	WD repeat-containing prot	no	N/A	0.545	0.478	0.263	5e-26

>sp|Q5H7C0|CDC20_PIG Cell division cycle protein 20 homolog OS=Sus scrofa GN=CDC20 PE=2 SV=1

 Score =  169 bits (428), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 122/415 (29%), Positives = 200/415 (48%), Gaps = 85/415 (20%)

Query: 121 VKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQS-KRTVSPTQFLRTLG--- 176
           +  ++Q  N +T + +E +K   L+  L+GF+++  K+L  S K   +P  +   L    
Sbjct: 95  LSKENQPDNSQTPTKKEHQKAWALN--LNGFDVEEAKILRLSGKPQNAPEGYQNRLKVLY 152

Query: 177 ----------KLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTK 226
                     K  R + + P+RIL+AP I ND+Y + +DW   + LAVALD SVY W+  
Sbjct: 153 SQKATPGSSRKTCRYIPSLPDRILDAPEIRNDYYLNLVDWSSGNVLAVALDNSVYLWSAS 212

Query: 227 TNKT-QLL-VEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHM 284
           +    QLL +E P     Y+S VAW      LAV  +  E + LW  Q+++ ++ + +H 
Sbjct: 213 SGDILQLLQMEQP---GDYVSSVAWIKEGNYLAVGTSSAE-VQLWDVQQQKRLRNMTSHS 268

Query: 285 HQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRY----- 339
            +V ++CWN  +LS G+  G+I H+DVR    +   ++     VCGL+W+P+GR+     
Sbjct: 269 ARVGSLCWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGG 328

Query: 340 ------------------------------------------LASG---SNNTVKIWD-- 352
                                                     LA+G   S+  ++IW+  
Sbjct: 329 NDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC 388

Query: 353 ----FRQLDAKRPLGLIV--PKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQE 406
                  +DA   +  I+  P  K    EL++ HG     L +W+YP +  + ELK H  
Sbjct: 389 SGACLSAVDAHSQVCSILWSPHYK----ELISGHGFAQNQLVIWKYPTMAKVAELKGHTA 444

Query: 407 RILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKARQVGSGSSLEFAILKQPV 461
           R+LS  +SPD   VA+A+ADET+ +W CF  D  R+ R+    S+ + +++ Q +
Sbjct: 445 RVLSLTMSPDGATVASAAADETLRLWRCFELDPARR-REREKASAAKSSLIHQGI 498

Required for full ubiquitin ligase activity of the anaphase promoting complex/cyclosome (APC/C) and may confer substrate specificity upon the complex. Is regulated by MAD2L1: in metaphase the MAD2L1-CDC20-APC/C ternary complex is inactive and in anaphase the CDC20-APC/C binary complex is active in degrading substrates. The CDC20-APC/C complex positively regulates the formation of synaptic vesicle clustering at active zone to the presynaptic membrane in postmitotic neurons. CDC20-APC/C-induced degradation of NEUROD2 induces presynaptic differentiation.
Sus scrofa (taxid: 9823)

>sp|Q12834|CDC20_HUMAN Cell division cycle protein 20 homolog OS=Homo sapiens GN=CDC20 PE=1 SV=2

 Score =  167 bits (423), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 122/415 (29%), Positives = 199/415 (47%), Gaps = 85/415 (20%)

Query: 121 VKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQS-KRTVSPTQFLRTLG--- 176
           +  ++Q  N +T + +E +K   L+  L+GF+++  K+L  S K   +P  +   L    
Sbjct: 95  LSKENQPENSQTPTKKEHQKAWALN--LNGFDVEEAKILRLSGKPQNAPEGYQNRLKVLY 152

Query: 177 ----------KLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTK 226
                     K  R + + P+RIL+AP I ND+Y + +DW   + LAVALD SVY W+  
Sbjct: 153 SQKATPGSSRKTCRYIPSLPDRILDAPEIRNDYYLNLVDWSSGNVLAVALDNSVYLWSAS 212

Query: 227 TNKT-QLL-VEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHM 284
           +    QLL +E P     YIS VAW      LAV  +  E + LW  Q+++ ++ + +H 
Sbjct: 213 SGDILQLLQMEQP---GEYISSVAWIKEGNYLAVGTSSAE-VQLWDVQQQKRLRNMTSHS 268

Query: 285 HQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRY----- 339
            +V ++ WN  +LS G+  G+I H+DVR    +   ++     VCGL+W+P+GR+     
Sbjct: 269 ARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGG 328

Query: 340 ------------------------------------------LASG---SNNTVKIWD-- 352
                                                     LA+G   S+  ++IW+  
Sbjct: 329 NDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC 388

Query: 353 ----FRQLDAKRPLGLIV--PKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQE 406
                  +DA   +  I+  P  K    EL++ HG     L +W+YP +  + ELK H  
Sbjct: 389 SGACLSAVDAHSQVCSILWSPHYK----ELISGHGFAQNQLVIWKYPTMAKVAELKGHTS 444

Query: 407 RILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKARQVGSGSSLEFAILKQPV 461
           R+LS  +SPD   VA+A+ADET+ +W CF  D  R+ R+    S+ + +++ Q +
Sbjct: 445 RVLSLTMSPDGATVASAAADETLRLWRCFELDPARR-REREKASAAKSSLIHQGI 498

Required for full ubiquitin ligase activity of the anaphase promoting complex/cyclosome (APC/C) and may confer substrate specificity upon the complex. Is regulated by MAD2L1: in metaphase the MAD2L1-CDC20-APC/C ternary complex is inactive and in anaphase the CDC20-APC/C binary complex is active in degrading substrates. The CDC20-APC/C complex positively regulates the formation of synaptic vesicle clustering at active zone to the presynaptic membrane in postmitotic neurons. CDC20-APC/C-induced degradation of NEUROD2 induces presynaptic differentiation.

Homo sapiens (taxid: 9606)

>sp|Q54MZ3|CDC20_DICDI Anaphase-promoting complex subunit cdc20 OS=Dictyostelium discoideum GN=cdc20 PE=1 SV=1

 Score =  158 bits (399), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 161/350 (46%), Gaps = 62/350 (17%)

Query: 162 SKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVY 221
           S+  V  T   ++L K  R++  +PERIL+AP I++D+Y + LDW   + +A+ L  +VY
Sbjct: 145 SQNQVGSTPTDQSLKKQFRQIPQQPERILDAPDIVDDYYLNLLDWSSQNVIAIPLGQTVY 204

Query: 222 TWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAV-TNTCTEYIDLWHEQEERLIQKL 280
            WN  T++ Q L +    D+ YI+ + W      LAV TN+CT  I LW     + +++L
Sbjct: 205 LWNATTSEIQRLFQVEQQDD-YITSLQWTKDGNYLAVGTNSCT--IQLWDVAHTKKVREL 261

Query: 281 RTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYL 340
           R H  +V A+ WN  +LS G+   NI ++DVR  + + + ++     VCGLKWS +G  L
Sbjct: 262 RGHAGRVGALAWNDYILSSGSSDTNIFNHDVRVQNHHVSTLSGHSQEVCGLKWSHDGGQL 321

Query: 341 ASGSN-NTVKIWDFRQLDAKRPLGLIVPKLKR---------EGRELVTSHGKQDCSLKMW 390
           ASG N N + IWD    + + P                   +   L T  G  D +++ W
Sbjct: 322 ASGGNDNIINIWDINSENFETPAHTFEQHTAAVRALAWCPFQPNLLATGGGAADRTIRFW 381

Query: 391 -------------------------------------------EYPRLHLIEELKIHQER 407
                                                      +YP +    EL  H  R
Sbjct: 382 NTITGVCLNTVDTMSQVCSIQWSTTYRELVSSHGYSQNQLCVWKYPSMVKCAELTGHTSR 441

Query: 408 ILSAVLSPDQTCVAAASADETISIWNCFPRDKK-----RKARQVGSGSSL 452
            L   +SPD   V +ASADET+  W  F ++ K     RK+++V  GS +
Sbjct: 442 ALHTAISPDGETVVSASADETLRFWRVFEKENKLPTANRKSKEVSDGSMM 491

Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.

Dictyostelium discoideum (taxid: 44689)

>sp|Q9JJ66|CDC20_MOUSE Cell division cycle protein 20 homolog OS=Mus musculus GN=Cdc20 PE=1 SV=2

 Score =  148 bits (373), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 184/403 (45%), Gaps = 85/403 (21%)

Query: 121 VKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQS-KRTVSPTQFLRTLG--- 176
           +  ++Q  +  T + +E +K    S  L+GF+++  K+L  S K   +P  +   L    
Sbjct: 95  LSKENQPEDRGTPTKKEHQKA--WSLNLNGFDVEEAKILRLSGKPQNAPEGYQNRLKVLY 152

Query: 177 ----------KLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTK 226
                     K  R + + P+RIL+AP I ND+Y + +DW   + LAVALD SVY WN  
Sbjct: 153 SQKATPGSSRKTCRYIPSLPDRILDAPEIRNDYYLNLVDWSSGNVLAVALDNSVYLWNAG 212

Query: 227 TNKT-QLL-VEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHM 284
           +    QLL +E P     YIS VAW      LAV  +  E + LW  Q+++ ++ + +H 
Sbjct: 213 SGDILQLLQMEQP---GDYISSVAWIKEGNYLAVGTSNAE-VQLWDVQQQKRLRNMTSHS 268

Query: 285 HQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLK------------ 332
            +V ++ WN  +LS G+  G+I H+DVR    +   ++     VCGL+            
Sbjct: 269 ARVSSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGG 328

Query: 333 ----------------WSP-------------------NGRYLASG---SNNTVKIWD-- 352
                           W+P                       LA+G   S+  ++IW+  
Sbjct: 329 NDNIVNVWPSGPGESGWAPLQTFTQHQGAVKAVAWCPWQSNILATGGGTSDRHIRIWNVC 388

Query: 353 ----FRQLDAKRPLGLIV--PKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQE 406
                  +D    +  I+  P  K    EL++ HG     L +W+YP +  + ELK H  
Sbjct: 389 SGACLSAVDVHSQVCSILWSPHYK----ELISGHGFAQNQLVIWKYPTMAKVAELKGHTA 444

Query: 407 RILSAVLSPDQTCVAAASADETISIWNCFPRDKK-RKARQVGS 448
           R+L   +SPD   VA+A+ADET+ +W CF  D   R+ R+  S
Sbjct: 445 RVLGLTMSPDGATVASAAADETLRLWRCFEMDPALRREREKAS 487

Required for full ubiquitin ligase activity of the anaphase promoting complex/cyclosome (APC/C) and may confer substrate specificity upon the complex. Is regulated by MAD2L1: in metaphase the MAD2L1-CDC20-APC/C ternary complex is inactive and in anaphase the CDC20-APC/C binary complex is active in degrading substrates. The CDC20-APC/C complex positively regulates the formation of synaptic vesicle clustering at active zone to the presynaptic membrane in postmitotic neurons. CDC20-APC/C-induced degradation of NEUROD2 induces presynaptic differentiation.

Mus musculus (taxid: 10090)

>sp|Q62623|CDC20_RAT Cell division cycle protein 20 homolog OS=Rattus norvegicus GN=Cdc20 PE=1 SV=2

 Score =  145 bits (366), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 113/378 (29%), Positives = 172/378 (45%), Gaps = 83/378 (21%)

Query: 148 LHGFEIDRKKVLNQS-KRTVSPTQFLRTLG-------------KLPRKVKAKPERILEAP 193
           L+GF+++  K+L  S K   +P  +   L              K  R + + P+RIL+AP
Sbjct: 120 LNGFDVEEAKILRLSGKPQNAPEGYQNRLKVLYSQKATPGSSRKACRYIPSLPDRILDAP 179

Query: 194 SIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKT-QLL-VEYPTYDNAYISCVAWKP 251
            I ND+Y + +DW   + LAVALD SVY WN  +    QLL +E P     YIS VAW  
Sbjct: 180 EIRNDYYLNLVDWSSGNVLAVALDNSVYLWNAGSGDILQLLQMEQP---GDYISSVAWIK 236

Query: 252 RTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDV 311
               LAV  +  E + LW  Q+++ ++ + +H  +V ++ WN  +LS G+  G+I H+DV
Sbjct: 237 EGNYLAVGTSNAE-VQLWDVQQQKRLRNMTSHSARVSSLSWNSYILSSGSRSGHIHHHDV 295

Query: 312 RTHSDYPTAITREGDVVCG----------------------------------------- 330
           R    +   ++     VCG                                         
Sbjct: 296 RVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNIVNVWPSGPGESGWVPLQTFTQHQ 355

Query: 331 -----LKWSP-NGRYLASG---SNNTVKIWD------FRQLDAKRPLGLIV--PKLKREG 373
                + W P     LA+G   S+  ++IW+         +D    +  I+  P  K   
Sbjct: 356 GAVKAVAWCPWQSNILATGGGTSDRHIRIWNVCSGACLSAVDVHSQVCSILWSPHYK--- 412

Query: 374 RELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWN 433
            EL++ HG     L +W+YP +  + ELK H  R+LS  +SPD   VA+A+ADET+ +W 
Sbjct: 413 -ELISGHGFAQNQLVIWKYPTMAKVAELKGHTARVLSLTMSPDGATVASAAADETLRLWR 471

Query: 434 CFPRDKK-RKARQVGSGS 450
           CF  D   R+ R+  S S
Sbjct: 472 CFELDPALRREREKASTS 489

Required for full ubiquitin ligase activity of the anaphase promoting complex/cyclosome (APC/C) and may confer substrate specificity upon the complex. Is regulated by MAD2L1: in metaphase the MAD2L1-CDC20-APC/C ternary complex is inactive and in anaphase the CDC20-APC/C binary complex is active in degrading substrates. The CDC20-APC/C complex positively regulates the formation of synaptic vesicle clustering at active zone to the presynaptic membrane in postmitotic neurons. CDC20-APC/C-induced degradation of NEUROD2 induces presynaptic differentiation (By similarity). Interacts with NEK2.

Rattus norvegicus (taxid: 10116)

>sp|O94423|MFR1_SCHPO Meiotic fizzy-related protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mfr1 PE=1 SV=1

 Score =  135 bits (341), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 99/372 (26%), Positives = 157/372 (42%), Gaps = 63/372 (16%)

Query: 125 SQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKA 184
           SQ +      Y E K++     L    +   +K  + S  +      LR   K  R    
Sbjct: 56  SQASRSRAFYYGEDKRKIEKKML----DTPDRKSYSLSPISPQSQDMLRQPQKPKRAFPK 111

Query: 185 KPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYI 244
            P +IL+AP + NDFY + LDWG  + LAV L +S+Y W+  + K   L ++   +  ++
Sbjct: 112 TPYKILDAPYLKNDFYLNLLDWGQSNVLAVGLASSIYLWSAASGKVVQLHDFGATN--HV 169

Query: 245 SCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGG 304
           + V W  + T LAV  T +  I +W  +  + ++ L+ H  +V A+ WN N L+ G    
Sbjct: 170 TSVLWTGKGTQLAV-GTDSGVIYIWDIESTKSVRSLKGHSERVAALAWNDNTLTSGGKDE 228

Query: 305 NILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN-NTVKIWDFRQLDAKRPL- 362
            ILH+D+R        +      +CGL+W  +   LASG N N + +WD+R   + RPL 
Sbjct: 229 VILHHDLRAPGCCAEMMKVHEQEICGLQWDRSLGQLASGGNDNNLFVWDYR---SSRPLH 285

Query: 363 ----------------------------------------GLIVPKL-----------KR 371
                                                   G +  KL            +
Sbjct: 286 KFEEHTAAVKAIGWSPHQRGILASGGGTIDRCLTIHNTLTGRLQNKLDTGSQVCNMAWSK 345

Query: 372 EGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISI 431
              E+VT+HG     + +W+YP L  I  L  H  R+L   +SPD   +   + DET+  
Sbjct: 346 TSNEIVTTHGFAKNQVSLWKYPSLKNIANLTAHTNRVLYLSMSPDGQSIVTGAGDETLRF 405

Query: 432 WNCFPRDKKRKA 443
           W  F +  K ++
Sbjct: 406 WKLFNKKPKEES 417

Meiosis-specific activator of the anaphase promoting complex/cyclosome (APC/C). Involved in cdc13 degradation.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q8L3Z8|FZR2_ARATH Protein FIZZY-RELATED 2 OS=Arabidopsis thaliana GN=FZR2 PE=1 SV=1

 Score =  122 bits (307), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 90/323 (27%), Positives = 136/323 (42%), Gaps = 54/323 (16%)

Query: 177 KLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEY 236
           K PRKV   P ++L+AP++ +DFY + +DW   + LAV L   VY WN  ++K   L + 
Sbjct: 155 KAPRKVPRSPYKVLDAPALQDDFYLNLVDWSAQNVLAVGLGNCVYLWNACSSKVTKLCDL 214

Query: 237 PTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNL 296
              D+  +  V W  R T LAV  T T  + +W     +  + +  H  +V A+ W  ++
Sbjct: 215 GAEDS--VCSVGWALRGTHLAV-GTSTGKVQIWDASRCKRTRTMEGHRLRVGALAWGSSV 271

Query: 297 LSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLK------------------------ 332
           LS G+   +IL  D+R   D+ + +      VCGLK                        
Sbjct: 272 LSSGSRDKSILQRDIRCQEDHVSKLAGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHS 331

Query: 333 ------------------WSPNGR-YLASGSNNTVKIWDFRQLDAKRPLGLI-----VPK 368
                             WSP+    LASG     +   F        L  I     V  
Sbjct: 332 TQPVLKYSEHTAAVKAIAWSPHVHGLLASGGGTADRCIRFWNTTTNTHLSSIDTCSQVCN 391

Query: 369 L--KREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASAD 426
           L   +   ELV++HG     + +W+YP +  I  L  H  R+L   +SPD   +   + D
Sbjct: 392 LAWSKNVNELVSTHGYSQNQIIVWKYPTMSKIATLTGHTYRVLYLAVSPDGQTIVTGAGD 451

Query: 427 ETISIWNCFPRDKKRKA-RQVGS 448
           ET+  WN FP  K +    ++GS
Sbjct: 452 ETLRFWNVFPSPKSQNTDSEIGS 474

Activator protein that regulates the ubiquitin ligase activity and substrate specificity of the anaphase promoting complex/cyclosome (APC/C). Necessary and sufficient for endoreduplication and correct cell expansion.

Arabidopsis thaliana (taxid: 3702)

>sp|P53197|CDH1_YEAST APC/C activator protein CDH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CDH1 PE=1 SV=1

 Score =  121 bits (304), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 156/363 (42%), Gaps = 67/363 (18%)

Query: 133 ISYREQKKRR--HLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERIL 190
           ++Y+++K RR    S L   F      V   SK      Q L + GK  R++   P R+L
Sbjct: 202 LTYQQRKGRRLSAASLLQSQFFDSMSPVRPDSK------QLLLSPGKQFRQIAKVPYRVL 255

Query: 191 EAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWK 250
           +APS+ +DFY S +DW   D LAVAL  S++  +   N T  +V     +N Y S ++W 
Sbjct: 256 DAPSLADDFYYSLIDWSSTDVLAVALGKSIFLTD---NNTGDVVHLCDTENEYTS-LSWI 311

Query: 251 PRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYD 310
              + LAV       ++++   + + I+ L  H+ +V  + WN ++L+ G+    ILH D
Sbjct: 312 GAGSHLAV-GQANGLVEIYDVMKRKCIRTLSGHIDRVACLSWNNHVLTSGSRDHRILHRD 370

Query: 311 VRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTV---------------------- 348
           VR    +   I      VCGLKW+     LASG N+ V                      
Sbjct: 371 VRMPDPFFETIESHTQEVCGLKWNVADNKLASGGNDNVVHVYEGTSKSPILTFDEHKAAV 430

Query: 349 ------------------------KIWD------FRQLDAKRPLGLIVPKLKREGRELVT 378
                                   KIW+         +D+   +  +V    +   ELVT
Sbjct: 431 KAMAWSPHKRGVLATGGGTADRRLKIWNVNTSIKMSDIDSGSQICNMV--WSKNTNELVT 488

Query: 379 SHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRD 438
           SHG    +L +W+   +  I  LK H  R+L   LS D T V + + DET+  W  F + 
Sbjct: 489 SHGYSKYNLTLWDCNSMDPIAILKGHSFRVLHLTLSNDGTTVVSGAGDETLRYWKLFDKP 548

Query: 439 KKR 441
           K +
Sbjct: 549 KAK 551

Activator protein that regulates the ubiquitin ligase activity and substrate specificity of the anaphase promoting complex/cyclosome (APC/C). During telophase and in the subsequent G1 phase of the cell cycle, recognizes and binds proteins containing a destruction box (D-box) and an additional degradation signal termed the KEN box including ASE1, CDC20, the B-type cyclins CLB2 and CLB3, the polo-like kinase CDC5 and HSL1, and recruits them in a C-box-dependent manner to the APC/C for ubiquitination and subsequent proteolysis. Required for exit from mitosis, cytokinesis and formation of prereplicative complexes in G1. Probably is the target of a BUB2-dependent spindle checkpoint pathway.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q54KM3|CDH1_DICDI Anaphase-promoting complex subunit cdh1 OS=Dictyostelium discoideum GN=cdh1 PE=3 SV=1

 Score =  120 bits (300), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 69/185 (37%), Positives = 102/185 (55%), Gaps = 4/185 (2%)

Query: 170 QFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNK 229
           + L +  K  RK+   P +IL+AP I +DFY + +DW  H+ LAV LDTSVY WN  T++
Sbjct: 385 KLLSSPRKPQRKISKTPIKILDAPMIKDDFYLNLIDWSSHNILAVGLDTSVYLWNATTSQ 444

Query: 230 TQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIA 289
              L E  +     +S V W  R             + +W   +++ I++L+ H  +V A
Sbjct: 445 VSKLCEMES--GQPVSSVGWIQRGGIHLAIGGTDGVVSIWDVNKKKKIRELQGHNTRVNA 502

Query: 290 MCWNGNLLSCGTIGGNILHYDVRTHS-DYPTAITREGDVVCGLKWSPNGRYLASGSN-NT 347
           + WN ++LS G     ILH+DVR  S +Y   +      +CGLKWSP+G+ LASG N N 
Sbjct: 503 LAWNNHILSSGGKDKVILHHDVRDCSNNYTNRLVGHRHEICGLKWSPDGQQLASGGNDNL 562

Query: 348 VKIWD 352
           + +WD
Sbjct: 563 LNVWD 567

Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.

Dictyostelium discoideum (taxid: 44689)

>sp|O13286|SRW1_SCHPO WD repeat-containing protein srw1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=srw1 PE=1 SV=1

 Score =  119 bits (298), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 84/319 (26%), Positives = 137/319 (42%), Gaps = 53/319 (16%)

Query: 180 RKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTY 239
           R++ + P R+L+AP +  DFY + LDWG  + LAVAL + VY W+  +++  ++  +  Y
Sbjct: 232 RELPSIPYRVLDAPGLAGDFYLNLLDWGQCNMLAVALASRVYLWSGISSEVTVMHNF--Y 289

Query: 240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSC 299
               ++ + W  R T LAV  T    +++W     +  + +  H  +V A+ WN ++LS 
Sbjct: 290 PTDTVTSLRWVQRGTHLAV-GTHNGSVEIWDAATCKKTRTMSGHTERVGALSWNDHVLSS 348

Query: 300 GTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN-NTVKIWDFRQLDA 358
           G    +ILH DVR    Y   +T     VCGL+W+ N   LASG N N + +WD  +   
Sbjct: 349 GGRDNHILHRDVRAPEHYFRVLTAHRQEVCGLEWNSNENLLASGGNDNALMVWDKFEEKP 408

Query: 359 KRPLGLIVPKLK------REGRELVTSHGKQDCSLKMW---------------------- 390
                  +  +K       +   L +  G  D ++K+W                      
Sbjct: 409 LYSFHNHIAAVKAITWSPHQRGILASGGGTADRTIKLWNTQRGSMLHNIDTGSQVCNLLW 468

Query: 391 ---------------------EYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETI 429
                                 YP +  +  LK H +R+L   +SP+   +   +ADET+
Sbjct: 469 SKQTNEFISTHGFMENEVALWNYPSVSRVGTLKGHTDRVLYLAMSPNGENIVTGAADETL 528

Query: 430 SIWNCFPRDKKRKARQVGS 448
             W  F    K  A  + S
Sbjct: 529 RFWKLFDSKSKHSASTMSS 547

Has a role in cell differentiation and cell cycling by negatively regulating cig2 and cdc12-associated cdc2. Down-regulates the level of cdc13, particularly in a nitrogen deprived environment. Regulator of cell cycle G1 phase progression. Prevents onset of mitosis during the pre-Start G1 period. Required for degradation of cdc13 mitotic cyclin B during G1 arrest but not during mitotic exit.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	488
410967020	499	PREDICTED: cell division cycle protein 2	0.676	0.661	0.301	1e-41
355677082	499	cell division cycle 20-like protein [Mus	0.676	0.661	0.293	2e-40
332017869	509	Cell division cycle protein 20-like prot	0.780	0.748	0.292	2e-40
411024320	420	Chain A, Structural Analysis Of Human Cd	0.676	0.785	0.296	2e-40
301780386	499	PREDICTED: cell division cycle protein 2	0.676	0.661	0.291	2e-40
359321384	499	PREDICTED: cell division cycle protein 2	0.676	0.661	0.296	3e-40
126723421	499	cell division cycle protein 20 homolog [	0.676	0.661	0.303	4e-40
432104523	500	Cell division cycle protein 20 like prot	0.674	0.658	0.301	5e-40
242009210	484	cell division cycle, putative [Pediculus	0.647	0.652	0.297	6e-40
296488891	499	TPA: cell division cycle 20 homolog [Bos	0.676	0.661	0.301	6e-40

>gi|410967020|ref|XP_003990021.1| PREDICTED: cell division cycle protein 20 homolog [Felis catus]

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 125/415 (30%), Positives = 201/415 (48%), Gaps = 85/415 (20%)

Query: 121 VKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQS-KRTVSPTQFLRTLG--- 176
           +  ++Q  N +T + +E +K   L+  L+GF+++  K+L  S K   +P  +   L    
Sbjct: 95  LSKENQPENSQTPTKKEHQKAWALN--LNGFDVEEAKILRLSGKPQNAPEGYQNRLKVLY 152

Query: 177 ----------KLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTK 226
                     K  R + + P+RIL+AP I ND+Y + +DW   + LAVALD SVY W+  
Sbjct: 153 SQKATPGSSRKTCRYIPSLPDRILDAPEIRNDYYLNLVDWSSGNVLAVALDNSVYLWSAS 212

Query: 227 TNKT-QLL-VEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHM 284
           +    QLL +E P     YIS VAW      LAV  +  E + LW  Q+++ ++ + +H 
Sbjct: 213 SGDILQLLQMEQP---GDYISSVAWIKEGNYLAVGTSSAE-VQLWDVQQQKRLRNMTSHS 268

Query: 285 HQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASG- 343
            +V ++CWN  +LS G+  G+I H+DVR    +   +T     VCGL+W+P+GR+LASG 
Sbjct: 269 ARVGSLCWNSYILSSGSRSGHIHHHDVRVAEHHVATLTGHSQEVCGLRWAPDGRHLASGG 328

Query: 344 -------------------------------------------------SNNTVKIWD-- 352
                                                            S+  ++IW+  
Sbjct: 329 NDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC 388

Query: 353 ----FRQLDAKRPLGLIV--PKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQE 406
                  +DA+  +  I+  P  K    EL++ HG     L +W+YP +  + ELK H  
Sbjct: 389 SGACLSAVDAQSQVCSILWSPHYK----ELISGHGFAQNQLVIWKYPTMAKVAELKGHTA 444

Query: 407 RILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKARQVGSGSSLEFAILKQPV 461
           R+LS  +SPD   VA+A+ADET+ +W CF  D  R+ R+    S+ + +++ Q +
Sbjct: 445 RVLSLTMSPDGATVASAAADETLRLWRCFELDPARR-REREKASAAKSSLIHQGI 498

Source: Felis catus

Species: Felis catus

Genus: Felis

Family: Felidae

Order: Carnivora

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|355677082|gb|AER95884.1| cell division cycle 20-like protein [Mustela putorius furo]

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 122/415 (29%), Positives = 200/415 (48%), Gaps = 85/415 (20%)

Query: 121 VKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQS-KRTVSPTQFLRTLG--- 176
           +  ++Q  + +T + +E +K   L+  L+GF+++  K+L  S K   +P  +   L    
Sbjct: 95  LSKENQPEDSQTPTKKEHQKAWALN--LNGFDVEEAKILRLSGKPQNAPEGYQNRLKVLY 152

Query: 177 ----------KLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTK 226
                     K  R + + P+RIL+AP I ND+Y + +DW   + LAVALD SVY W+  
Sbjct: 153 SQKATPGSSRKTCRYIPSLPDRILDAPEIRNDYYLNLVDWSSGNVLAVALDNSVYLWSAS 212

Query: 227 TNKT-QLL-VEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHM 284
           +    QLL +E P     YIS VAW      LAV  +  E + LW  Q+++ ++ + +H 
Sbjct: 213 SGDILQLLQMEQP---GDYISSVAWIKEGNYLAVGTSSAE-VQLWDVQQQKRLRNMTSHS 268

Query: 285 HQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASG- 343
            +V ++CWN  ++S G+  G I H+DVR    +   ++     VCGL+W+P+GR+LASG 
Sbjct: 269 ARVSSLCWNSYIVSSGSRSGQIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGG 328

Query: 344 -------------------------------------------------SNNTVKIWD-- 352
                                                            S+  ++IW+  
Sbjct: 329 NDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC 388

Query: 353 ----FRQLDAKRPLGLIV--PKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQE 406
                  +DA+  +  I+  P  K    EL++ HG     L +W+YP +  + ELK H  
Sbjct: 389 SGACLSAVDAQSQVCSILWSPHYK----ELISGHGFAQNQLVIWKYPTMAKVAELKGHTA 444

Query: 407 RILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKARQVGSGSSLEFAILKQPV 461
           R+LS  +SPD   VA+A+ADET+ +W CF  D  R+ R+    S+ + +++ Q +
Sbjct: 445 RVLSLTMSPDGATVASAAADETLRLWRCFELDPARR-REREKASAAKSSLIHQGI 498

Source: Mustela putorius furo

Species: Mustela putorius

Genus: Mustela

Family: Mustelidae

Order: Carnivora

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|332017869|gb|EGI58529.1| Cell division cycle protein 20-like protein [Acromyrmex echinatior]

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 133/454 (29%), Positives = 207/454 (45%), Gaps = 73/454 (16%)

Query: 56  NNTVKIWDF-RQLDAKRPQVNNQCHL--SAVKAIAWCPWEPTLLATGGGICDQTVRLWNS 112
           N++ KI  F   +  K P   N C    +  K I   P   T  A      D+ +    +
Sbjct: 44  NSSKKITSFTSSVSGKTPTKKNDCKTKKTPSKYIKKSPSRATTPAKTPSGGDRFIPSRAT 103

Query: 113 MNGKEKCHVKTDSQQANDE------TISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTV 166
            N  E  H K   QQ  ++       +S ++++ +R +   LHG +I+  +VL+   +  
Sbjct: 104 TNF-ELSHFKILQQQNAEQDKDKADKMSPKKREMQRLIGENLHGGDINNARVLSYQIKAP 162

Query: 167 SPTQ-------FLRTLGKLPRKVKA-------KPERILEAPSIINDFYTSGLDWGYHDTL 212
           +P +        L +  K P  V+A        P+RIL+AP II+D+Y + +DW  ++ L
Sbjct: 163 APPEGYQNPLKVLYSQTKTPASVRAPTRYIPQAPDRILDAPEIIDDYYLNLVDWSNNNIL 222

Query: 213 AVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQ 272
           AVAL ++VY WN  T   + L E    D  Y+  VAW      LAV  T     +LW   
Sbjct: 223 AVALGSNVYLWNAGTGTIEQLFELEAND--YVCSVAWIQEGPCLAVGTTVGN-TELWDCS 279

Query: 273 EERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLK 332
           + + ++ +  H+ +V ++ WN ++LS G   G I+H+DVR      + I      VCGLK
Sbjct: 280 QMKRMRVMNGHITRVGSLSWNSHVLSSGCRSGKIVHHDVRERDHLISTINAHAQEVCGLK 339

Query: 333 WSPNGRYLASGSN-NTVKIW---------------DFRQ--------------------- 355
           WSP+G+YLASG N N ++IW                F Q                     
Sbjct: 340 WSPDGQYLASGGNDNMLQIWSSLAGQRHAQTQPIYSFNQHQAAVKALAWCPWQNNVLASG 399

Query: 356 -------LDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERI 408
                  +D K  +  ++       +E+V+ HG     L +W+YP +  + EL  H  R+
Sbjct: 400 GGACLNTIDTKSQVCALL--WSTNYKEIVSGHGYAQNQLTIWKYPAMTKLAELTGHTSRV 457

Query: 409 LSAVLSPDQTCVAAASADETISIWNCFPRDKKRK 442
           L   +SPD T V +A ADET+ +W CF  D ++K
Sbjct: 458 LHLAMSPDGTTVLSAGADETLRLWKCFQVDPQKK 491

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|411024320|pdb|4GGA|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC

 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 123/415 (29%), Positives = 199/415 (47%), Gaps = 85/415 (20%)

Query: 121 VKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQS-KRTVSPTQFLRTLG--- 176
           +  ++Q  N +T + +E +K   L+  L+GF+++  K+L  S K   +P  +   L    
Sbjct: 16  LSKENQPENSQTPTKKEHQKAWALN--LNGFDVEEAKILRLSGKPQNAPEGYQNRLKVLY 73

Query: 177 ----------KLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTK 226
                     K  R + + P+RIL+AP I ND+Y + +DW   + LAVALD SVY W+  
Sbjct: 74  SQKATPGSSRKTCRYIPSLPDRILDAPEIRNDYYLNLVDWSSGNVLAVALDNSVYLWSAS 133

Query: 227 TNKT-QLL-VEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHM 284
           +    QLL +E P     YIS VAW      LAV  +  E + LW  Q+++ ++ + +H 
Sbjct: 134 SGDILQLLQMEQP---GEYISSVAWIKEGNYLAVGTSSAE-VQLWDVQQQKRLRNMTSHS 189

Query: 285 HQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASG- 343
            +V ++ WN  +LS G+  G+I H+DVR    +   ++     VCGL+W+P+GR+LASG 
Sbjct: 190 ARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGG 249

Query: 344 -------------------------------------------------SNNTVKIWD-- 352
                                                            S+  ++IW+  
Sbjct: 250 NDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC 309

Query: 353 ----FRQLDAKRPLGLIV--PKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQE 406
                  +DA   +  I+  P  K    EL++ HG     L +W+YP +  + ELK H  
Sbjct: 310 SGACLSAVDAHSQVCSILWSPHYK----ELISGHGFAQNQLVIWKYPTMAKVAELKGHTS 365

Query: 407 RILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKARQVGSGSSLEFAILKQPV 461
           R+LS  +SPD   VA+A+ADET+ +W CF  D  R+ R+    S+ + +++ Q +
Sbjct: 366 RVLSLTMSPDGATVASAAADETLRLWRCFELDPARR-REREKASAAKSSLIHQGI 419

Source: Homo sapiens

Species: Homo sapiens

Genus: Homo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|301780386|ref|XP_002925605.1| PREDICTED: cell division cycle protein 20 homolog [Ailuropoda melanoleuca] gi|281354705|gb|EFB30289.1| hypothetical protein PANDA_015130 [Ailuropoda melanoleuca]

 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 202/415 (48%), Gaps = 85/415 (20%)

Query: 121 VKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQS-KRTVSPTQFLRTLG--- 176
           +  ++Q  + +T + +E +K   L+  L+GF+++  K+L  S K   +P  +   L    
Sbjct: 95  LSKENQPEDSQTPTKKEHQKAWALN--LNGFDVEEAKILRLSGKPQNAPEGYQNRLKVLY 152

Query: 177 ----------KLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTK 226
                     K  R + + P+RIL+AP I ND+Y + +DW   + LAVALD+SVY W+  
Sbjct: 153 SQKATPGSSRKTCRYIPSLPDRILDAPEIRNDYYLNLVDWSSGNVLAVALDSSVYLWSAS 212

Query: 227 TNKT-QLL-VEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHM 284
           +    QLL +E P     Y+S VAW      LAV  +  E + LW  Q+++ ++ + +H 
Sbjct: 213 SGDILQLLQMEQP---GDYVSSVAWIKEGNYLAVGTSNAE-VQLWDVQQQKRLRNMTSHS 268

Query: 285 HQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASG- 343
            +V ++CWN  ++S G+  G+I H+DVR    +   ++     VCGL+W+P+GR+LASG 
Sbjct: 269 ARVSSLCWNSYIVSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGG 328

Query: 344 -------------------------------------------------SNNTVKIWD-- 352
                                                            S+  ++IW+  
Sbjct: 329 NDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC 388

Query: 353 ----FRQLDAKRPLGLIV--PKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQE 406
                  +DA+  +  I+  P  K    EL++ HG     L +W+YP +  + ELK H  
Sbjct: 389 SGACLSAVDAQSQVCSILWSPHYK----ELISGHGFAQNQLVIWKYPTMAKVAELKGHTA 444

Query: 407 RILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKARQVGSGSSLEFAILKQPV 461
           R+LS  +SPD   VA+A+ADET+ +W CF  D  R+ R+    S+ + +++ Q +
Sbjct: 445 RVLSLTMSPDGATVASAAADETLRLWRCFELDPARR-REREKASAAKSSLIHQGI 498

Source: Ailuropoda melanoleuca

Species: Ailuropoda melanoleuca

Genus: Ailuropoda

Family: Ursidae

Order: Carnivora

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|359321384|ref|XP_003639578.1| PREDICTED: cell division cycle protein 20 homolog [Canis lupus familiaris]

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 123/415 (29%), Positives = 198/415 (47%), Gaps = 85/415 (20%)

Query: 121 VKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQS-KRTVSPTQFLRTLG--- 176
           +  ++Q     T + +E +K   L+  L+GF+++  K+L  S K   +P  +   L    
Sbjct: 95  LSKENQPEESHTPTKKEHQKAWALN--LNGFDVEEAKILRLSGKPQNAPEGYQNRLKVLY 152

Query: 177 ----------KLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTK 226
                     K  R + + P+RIL+AP I ND+Y + +DW   + LAVALD SVY W+  
Sbjct: 153 SQKATPGSTRKTCRYIPSLPDRILDAPEIRNDYYLNLVDWSSGNVLAVALDNSVYLWSAS 212

Query: 227 TNKT-QLL-VEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHM 284
           +    QLL +E P     YIS VAW      LAV  +  E + LW  Q+++ ++ +  H 
Sbjct: 213 SGDILQLLQMEQP---GEYISSVAWIKEGNYLAVGTSSAE-VQLWDVQQQKRLRNMTGHS 268

Query: 285 HQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASG- 343
            +V ++CWN  +LS G+  G+I H+DVR    +   ++     VCGL+W+P+GR+LASG 
Sbjct: 269 ARVSSLCWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGG 328

Query: 344 -------------------------------------------------SNNTVKIWD-- 352
                                                            S+  ++IW+  
Sbjct: 329 NDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC 388

Query: 353 ----FRQLDAKRPLGLIV--PKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQE 406
                  +DA+  +  I+  P  K    EL++ HG     L +W+YP +  + ELK H  
Sbjct: 389 SGACLSAVDAQSQVCSILWSPHYK----ELISGHGFAQNQLVIWKYPTMAKVAELKGHTA 444

Query: 407 RILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKARQVGSGSSLEFAILKQPV 461
           R+LS  +SPD   VA+A+ADET+ +W CF  D  R+ R+    S+ + +++ Q +
Sbjct: 445 RVLSLTMSPDGATVASAAADETLRLWRCFELDPARR-REREKASAAKSSLIHQGI 498

Source: Canis lupus familiaris

Species: Canis lupus

Genus: Canis

Family: Canidae

Order: Carnivora

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|126723421|ref|NP_001075905.1| cell division cycle protein 20 homolog [Bos taurus] gi|126010593|gb|AAI33495.1| CDC20 protein [Bos taurus]

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 126/415 (30%), Positives = 202/415 (48%), Gaps = 85/415 (20%)

Query: 121 VKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQS-KRTVSPTQFLRTLGKL- 178
           +  ++Q  N ET + +E +K   L+  L+GF+++  K+L  S K   +P  +   L +L 
Sbjct: 95  LSKENQPDNSETPTKKEHQKAWALN--LNGFDMEEAKILRLSGKPQNAPEGYQNRLKELY 152

Query: 179 -----P-------RKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTK 226
                P       R + + P+RIL+AP I ND+Y + +DW   + LAVALD SVY W+  
Sbjct: 153 SQKATPGSSRKTCRYIPSLPDRILDAPEIRNDYYLNLVDWSSGNVLAVALDNSVYLWSAS 212

Query: 227 TNKT-QLL-VEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHM 284
           T    QLL +E P     YIS VAW      LAV  +  E + LW  Q+++ ++ + +H 
Sbjct: 213 TGDILQLLQMEQP---GDYISSVAWIKEGNYLAVGTSSAE-VQLWDVQQQKRLRNMTSHS 268

Query: 285 HQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRY----- 339
            +V ++CWN  +LS G+  G+I H+DVR    +   ++     VCGL+W+P+GR+     
Sbjct: 269 ARVGSLCWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGG 328

Query: 340 ------------------------------------------LASG---SNNTVKIWD-- 352
                                                     LA+G   S+  ++IW+  
Sbjct: 329 NDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC 388

Query: 353 ----FRQLDAKRPLGLIV--PKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQE 406
                  +DA   +  I+  P  K    EL++ HG     L +W+YP +  + ELK H  
Sbjct: 389 SGACLSAVDAHSQVCSILWSPHYK----ELISGHGFAQNQLVIWKYPTMAKVAELKGHTA 444

Query: 407 RILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKARQVGSGSSLEFAILKQPV 461
           R+LS  +SPD   VA+A+ADET+ +W CF  D  R+ R+    S+ + +++ Q +
Sbjct: 445 RVLSLTMSPDGATVASAAADETLRLWRCFELDPARR-REREKASAAKSSLIHQGI 498

Source: Bos taurus

Species: Bos taurus

Genus: Bos

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|432104523|gb|ELK31141.1| Cell division cycle protein 20 like protein [Myotis davidii]

 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 125/414 (30%), Positives = 194/414 (46%), Gaps = 85/414 (20%)

Query: 122 KTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRT---------------- 165
           K +S   N +T + +E +K   L+  L+GF+++  K+L  S +                 
Sbjct: 97  KENSHSENSQTPTKKEHQKAWALN--LNGFDVEEAKILRLSGKPQKVPEGYENRLKVLYS 154

Query: 166 --VSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTW 223
              +P    RT     R + + P+RIL+AP I ND+Y + +DW   + LAVALD SVY W
Sbjct: 155 QKATPGSSKRTC----RYIPSLPDRILDAPEIRNDYYLNLVDWSSGNVLAVALDNSVYLW 210

Query: 224 NTKTNKT-QLL-VEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLR 281
           +  T    QLL +E P     Y+S V+W      LAV  +  E + LW  Q+++ ++ + 
Sbjct: 211 SASTGDILQLLQMEQP---GDYVSSVSWIKEGNYLAVGTSSAE-VQLWDVQQQKRLRNMT 266

Query: 282 THMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLA 341
           +H  +V A+CWN  +LS G+  G+I H+DVR    +   ++     VCGL+WSP+GR+LA
Sbjct: 267 SHSARVGALCWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWSPDGRHLA 326

Query: 342 SGSN-NTVKIWDFRQLDAK-RPLGLI---------VPKLKREGRELVTSHGKQDCSLKMW 390
           SG N N V +W    L+A   PL            V     +   L T  G  D  +++W
Sbjct: 327 SGGNDNLVNVWPSAALEAGWVPLQTFTQHQGAVKAVAWCPWQSNILATGGGTSDRHIRIW 386

Query: 391 -------------------------------------------EYPRLHLIEELKIHQER 407
                                                      +YP +  + ELK H  R
Sbjct: 387 NVCSGACLNAVDAHSQVCSILWSSHYKELISGHGFAQNQLVIWKYPTMVKVAELKGHTAR 446

Query: 408 ILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKARQVGSGSSLEFAILKQPV 461
           +LS  +SPD   VA+A+ADET+ +W CF  D  R+ R+    S+ + +++ Q +
Sbjct: 447 VLSLAMSPDGATVASAAADETLRMWRCFELDPARR-REREKASATKSSLIHQGI 499

Source: Myotis davidii

Species: Myotis davidii

Genus: Myotis

Family: Vespertilionidae

Order: Chiroptera

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|242009210|ref|XP_002425384.1| cell division cycle, putative [Pediculus humanus corporis] gi|212509178|gb|EEB12646.1| cell division cycle, putative [Pediculus humanus corporis]

 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 112/377 (29%), Positives = 175/377 (46%), Gaps = 61/377 (16%)

Query: 127 QANDETISYREQKKRRHLSFLLHGFEIDRKKVLN-QSKRTVSPTQFLRTLGKL------- 178
           Q  ++  +  +   +R L+  +HG +++  K+L+ Q+K    P  ++  L  +       
Sbjct: 96  QEEEDDDALPKNDNQRILAETIHGGDLNNMKILSYQNKAPAPPEGYMNPLRVMYSQTKSS 155

Query: 179 ------PRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQL 232
                  R +   PERIL+AP +I+D+Y + +DW   + LAVAL   VY WN  T   + 
Sbjct: 156 STVKGSSRYIPQSPERILDAPDVIDDYYLNLIDWSTTNILAVALSNCVYLWNAATGAIEE 215

Query: 233 LVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW 292
           L+E    D  Y++ VAW      LAV  T T    +W   E R ++ +  H  +V +  W
Sbjct: 216 LLELEGSD--YVTSVAWIQEGNYLAV-GTFTGSTQIWDCNEMRRLRTMEGHTARVCSHSW 272

Query: 293 NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN-NTVKIW 351
           N  +LS G+  G I+H+DVR  +     +    + VCGLKWSP+G+YLASG+N N + IW
Sbjct: 273 NQFILSSGSRSGQIIHHDVRQRNHTIAVLNGHSEEVCGLKWSPDGKYLASGANDNLLNIW 332

Query: 352 DFRQ---LDAKRPLGLIV---------------PKLKREG-------------------- 373
              Q     A +PL                   P +   G                    
Sbjct: 333 PQLQDQMYTASQPLHTFSEHQAAVKALAWCPWQPGVLASGGGTADRCIRIWNINSGSLLS 392

Query: 374 -----RELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADET 428
                 +L++ HG  +  L +W+YP ++ + EL  H  R+L    SPD + V +A ADET
Sbjct: 393 TTDTKSQLISGHGYANNQLTIWKYPSMNKVTELTGHTARVLHLCTSPDGSSVMSAGADET 452

Query: 429 ISIWNCFPRDKKRKARQ 445
           + +W CF  D  +K  +
Sbjct: 453 LRLWMCFAPDPNKKGEK 469

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|296488891|tpg|DAA31004.1| TPA: cell division cycle 20 homolog [Bos taurus] gi|440903947|gb|ELR54532.1| Cell division cycle protein 20-like protein [Bos grunniens mutus]

 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 125/415 (30%), Positives = 200/415 (48%), Gaps = 85/415 (20%)

Query: 121 VKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQS-KRTVSPTQFLRTLG--- 176
           +  ++Q  N ET + +E +K   L+  L+GF+++  K+L  S K   +P  +   L    
Sbjct: 95  LSKENQPDNSETPTKKEHQKAWALN--LNGFDMEEAKILRLSGKPQNAPEGYQNRLKVLY 152

Query: 177 ----------KLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTK 226
                     K  R + + P+RIL+AP I ND+Y + +DW   + LAVALD SVY W+  
Sbjct: 153 SQKATPGSSRKTCRYIPSLPDRILDAPEIRNDYYLNLVDWSSGNVLAVALDNSVYLWSAS 212

Query: 227 TNKT-QLL-VEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHM 284
           T    QLL +E P     YIS VAW      LAV  +  E + LW  Q+++ ++ + +H 
Sbjct: 213 TGDILQLLQMEQP---GDYISSVAWIKEGNYLAVGTSSAE-VQLWDVQQQKRLRNMTSHS 268

Query: 285 HQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRY----- 339
            +V ++CWN  +LS G+  G+I H+DVR    +   ++     VCGL+W+P+GR+     
Sbjct: 269 ARVGSLCWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGG 328

Query: 340 ------------------------------------------LASG---SNNTVKIWD-- 352
                                                     LA+G   S+  ++IW+  
Sbjct: 329 NDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC 388

Query: 353 ----FRQLDAKRPLGLIV--PKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQE 406
                  +DA   +  I+  P  K    EL++ HG     L +W+YP +  + ELK H  
Sbjct: 389 SGACLSAVDAHSQVCSILWSPHYK----ELISGHGFAQNQLVIWKYPTMAKVAELKGHTA 444

Query: 407 RILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKARQVGSGSSLEFAILKQPV 461
           R+LS  +SPD   VA+A+ADET+ +W CF  D  R+ R+    S+ + +++ Q +
Sbjct: 445 RVLSLTMSPDGATVASAAADETLRLWRCFELDPARR-REREKASAAKSSLIHQGI 498

Source: Bos taurus

Species: Bos taurus

Genus: Bos

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	488
UNIPROTKB|F1MRW5	499	CDC20 "Uncharacterized protein	0.454	0.444	0.371	3.6e-34
UNIPROTKB|Q5H7C0	499	CDC20 "Cell division cycle pro	0.454	0.444	0.359	1.5e-33
UNIPROTKB|Q12834	499	CDC20 "Cell division cycle pro	0.454	0.444	0.359	8.5e-33
DICTYBASE|DDB_G0285601	499	cdc20 "cdc20/fizzy domain-cont	0.403	0.394	0.371	1.6e-31
MGI|MGI:1859866	499	Cdc20 "cell division cycle 20"	0.625	0.611	0.307	3.9e-31
UNIPROTKB|Q5ZI36	507	CDC20 "Uncharacterized protein	0.448	0.431	0.365	7.5e-31
RGD|620477	499	Cdc20 "cell division cycle 20"	0.391	0.382	0.385	2.5e-30
UNIPROTKB|Q62623	499	Cdc20 "Cell division cycle pro	0.391	0.382	0.385	2.5e-30
DICTYBASE|DDB_G0287259	754	cdh1 "cdc20/fizzy domain-conta	0.504	0.326	0.323	1.6e-27
TAIR|locus:2143636	411	CDC20.5 "AT5G27570" [Arabidops	0.418	0.496	0.341	2.1e-27

UNIPROTKB|F1MRW5 CDC20 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
 Identities = 91/245 (37%), Positives = 139/245 (56%)

Query:   124 DSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQS-KRTVSPTQF---LRTL---- 175
             ++Q  N ET + +E +K   L+  L+GF+++  K+L  S K   +P  +   L+ L    
Sbjct:    98 ENQPDNSETPTKKEHQKAWALN--LNGFDMEEAKILRLSGKPQNAPEGYQNRLKVLYSQK 155

Query:   176 ---G---KLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNK 229
                G   K  R + + P+RIL+AP I ND+Y + +DW   + LAVALD SVY W+  T  
Sbjct:   156 ATPGSSRKTCRYIPSLPDRILDAPEIRNDYYLNLVDWSSGNVLAVALDNSVYLWSASTGD 215

Query:   230 T-QLL-VEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQV 287
               QLL +E P     YIS VAW      LAV  +  E + LW  Q+++ ++ + +H  +V
Sbjct:   216 ILQLLQMEQP---GDYISSVAWIKEGNYLAVGTSSAE-VQLWDVQQQKRLRNMTSHSARV 271

Query:   288 IAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN-N 346
              ++CWN  +LS G+  G+I H+DVR    +   ++     VCGL+W+P+GR+LASG N N
Sbjct:   272 GSLCWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDN 331

Query:   347 TVKIW 351
              V +W
Sbjct:   332 LVNVW 336

GO:0090129 "positive regulation of synapse maturation" evidence=IEA

GO:0051488 "activation of anaphase-promoting complex activity" evidence=IEA

GO:0040020 "regulation of meiosis" evidence=IEA

GO:0031915 "positive regulation of synaptic plasticity" evidence=IEA

GO:0031145 "anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process" evidence=IEA

GO:0019899 "enzyme binding" evidence=IEA

GO:0008022 "protein C-terminus binding" evidence=IEA

GO:0005680 "anaphase-promoting complex" evidence=IEA

UNIPROTKB|Q5H7C0 CDC20 "Cell division cycle protein 20 homolog" [Sus scrofa (taxid:9823)]

 Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
 Identities = 88/245 (35%), Positives = 139/245 (56%)

Query:   124 DSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQS-KRTVSPTQF---LRTL---- 175
             ++Q  N +T + +E +K   L+  L+GF+++  K+L  S K   +P  +   L+ L    
Sbjct:    98 ENQPDNSQTPTKKEHQKAWALN--LNGFDVEEAKILRLSGKPQNAPEGYQNRLKVLYSQK 155

Query:   176 ---G---KLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNK 229
                G   K  R + + P+RIL+AP I ND+Y + +DW   + LAVALD SVY W+  +  
Sbjct:   156 ATPGSSRKTCRYIPSLPDRILDAPEIRNDYYLNLVDWSSGNVLAVALDNSVYLWSASSGD 215

Query:   230 T-QLL-VEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQV 287
               QLL +E P     Y+S VAW      LAV  +  E + LW  Q+++ ++ + +H  +V
Sbjct:   216 ILQLLQMEQP---GDYVSSVAWIKEGNYLAVGTSSAE-VQLWDVQQQKRLRNMTSHSARV 271

Query:   288 IAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN-N 346
              ++CWN  +LS G+  G+I H+DVR    +   ++     VCGL+W+P+GR+LASG N N
Sbjct:   272 GSLCWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDN 331

Query:   347 TVKIW 351
              V +W
Sbjct:   332 LVNVW 336

GO:0031915 "positive regulation of synaptic plasticity" evidence=ISS

GO:0090129 "positive regulation of synapse maturation" evidence=ISS

GO:0051488 "activation of anaphase-promoting complex activity" evidence=ISS

GO:0005680 "anaphase-promoting complex" evidence=ISS

GO:0016567 "protein ubiquitination" evidence=IEA

GO:0005815 "microtubule organizing center" evidence=IEA

GO:0000922 "spindle pole" evidence=IEA

GO:0040020 "regulation of meiosis" evidence=IEA

GO:0031145 "anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process" evidence=IEA

GO:0019899 "enzyme binding" evidence=IEA

GO:0008022 "protein C-terminus binding" evidence=IEA

GO:0051301 "cell division" evidence=IEA

GO:0007067 "mitosis" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

UNIPROTKB|Q12834 CDC20 "Cell division cycle protein 20 homolog" [Homo sapiens (taxid:9606)]

 Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
 Identities = 88/245 (35%), Positives = 138/245 (56%)

Query:   124 DSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQS-KRTVSPTQF---LRTL---- 175
             ++Q  N +T + +E +K   L+  L+GF+++  K+L  S K   +P  +   L+ L    
Sbjct:    98 ENQPENSQTPTKKEHQKAWALN--LNGFDVEEAKILRLSGKPQNAPEGYQNRLKVLYSQK 155

Query:   176 ---G---KLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNK 229
                G   K  R + + P+RIL+AP I ND+Y + +DW   + LAVALD SVY W+  +  
Sbjct:   156 ATPGSSRKTCRYIPSLPDRILDAPEIRNDYYLNLVDWSSGNVLAVALDNSVYLWSASSGD 215

Query:   230 T-QLL-VEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQV 287
               QLL +E P     YIS VAW      LAV  +  E + LW  Q+++ ++ + +H  +V
Sbjct:   216 ILQLLQMEQP---GEYISSVAWIKEGNYLAVGTSSAE-VQLWDVQQQKRLRNMTSHSARV 271

Query:   288 IAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN-N 346
              ++ WN  +LS G+  G+I H+DVR    +   ++     VCGL+W+P+GR+LASG N N
Sbjct:   272 GSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDN 331

Query:   347 TVKIW 351
              V +W
Sbjct:   332 LVNVW 336

GO:0051301 "cell division" evidence=IEA

GO:0005813 "centrosome" evidence=IEA

GO:0008284 "positive regulation of cell proliferation" evidence=IEA

GO:0040020 "regulation of meiosis" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0050773 "regulation of dendrite development" evidence=IEA

GO:0000922 "spindle pole" evidence=IEA

GO:0016567 "protein ubiquitination" evidence=IEA

GO:0008022 "protein C-terminus binding" evidence=IPI

GO:0005515 "protein binding" evidence=IPI

GO:0051488 "activation of anaphase-promoting complex activity" evidence=IDA

GO:0019899 "enzyme binding" evidence=IPI

GO:0031145 "anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process" evidence=IDA;TAS

GO:0005680 "anaphase-promoting complex" evidence=IDA

GO:0090129 "positive regulation of synapse maturation" evidence=ISS

GO:0031915 "positive regulation of synaptic plasticity" evidence=ISS

GO:0005819 "spindle" evidence=TAS

GO:0007049 "cell cycle" evidence=TAS

GO:0000075 "cell cycle checkpoint" evidence=TAS

GO:0000087 "M phase of mitotic cell cycle" evidence=TAS

GO:0000236 "mitotic prometaphase" evidence=TAS

GO:0000278 "mitotic cell cycle" evidence=TAS

GO:0005654 "nucleoplasm" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0007094 "mitotic spindle assembly checkpoint" evidence=TAS

GO:0051436 "negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle" evidence=TAS

GO:0051437 "positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle" evidence=TAS

GO:0051439 "regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle" evidence=TAS

DICTYBASE|DDB_G0285601 cdc20 "cdc20/fizzy domain-containing protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 353 (129.3 bits), Expect = 1.6e-31, P = 1.6e-31
 Identities = 75/202 (37%), Positives = 116/202 (57%)

Query:   162 SKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVY 221
             S+  V  T   ++L K  R++  +PERIL+AP I++D+Y + LDW   + +A+ L  +VY
Sbjct:   145 SQNQVGSTPTDQSLKKQFRQIPQQPERILDAPDIVDDYYLNLLDWSSQNVIAIPLGQTVY 204

Query:   222 TWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAV-TNTCTEYIDLWHEQEERLIQKL 280
              WN  T++ Q L +    D+ YI+ + W      LAV TN+CT  I LW     + +++L
Sbjct:   205 LWNATTSEIQRLFQVEQQDD-YITSLQWTKDGNYLAVGTNSCT--IQLWDVAHTKKVREL 261

Query:   281 RTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYL 340
             R H  +V A+ WN  +LS G+   NI ++DVR  + + + ++     VCGLKWS +G  L
Sbjct:   262 RGHAGRVGALAWNDYILSSGSSDTNIFNHDVRVQNHHVSTLSGHSQEVCGLKWSHDGGQL 321

Query:   341 ASGSN-NTVKIWDFRQLDAKRP 361
             ASG N N + IWD    + + P
Sbjct:   322 ASGGNDNIINIWDINSENFETP 343

GO:0045335 "phagocytic vesicle" evidence=IDA

GO:0051301 "cell division" evidence=IEA

GO:0007067 "mitosis" evidence=IEA

GO:0007049 "cell cycle" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0016567 "protein ubiquitination" evidence=IEA

MGI|MGI:1859866 Cdc20 "cell division cycle 20" [Mus musculus (taxid:10090)]

 Score = 351 (128.6 bits), Expect = 3.9e-31, P = 3.9e-31
 Identities = 105/342 (30%), Positives = 171/342 (50%)

Query:   124 DSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQS-KRTVSPTQF---LRTL---- 175
             ++Q  +  T + +E +K   L+  L+GF+++  K+L  S K   +P  +   L+ L    
Sbjct:    98 ENQPEDRGTPTKKEHQKAWSLN--LNGFDVEEAKILRLSGKPQNAPEGYQNRLKVLYSQK 155

Query:   176 ---G---KLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNK 229
                G   K  R + + P+RIL+AP I ND+Y + +DW   + LAVALD SVY WN  +  
Sbjct:   156 ATPGSSRKTCRYIPSLPDRILDAPEIRNDYYLNLVDWSSGNVLAVALDNSVYLWNAGSGD 215

Query:   230 T-QLL-VEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQV 287
               QLL +E P     YIS VAW      LAV  +  E + LW  Q+++ ++ + +H  +V
Sbjct:   216 ILQLLQMEQP---GDYISSVAWIKEGNYLAVGTSNAE-VQLWDVQQQKRLRNMTSHSARV 271

Query:   288 IAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN-N 346
              ++ WN  +LS G+  G+I H+DVR    +   ++     VCGL+W+P+GR+LASG N N
Sbjct:   272 SSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDN 331

Query:   347 TVKIWDFRQLDAK-RPL-------GLI--VPKLKREGRELVTSHGKQDCSLKMWEYPRLH 396
              V +W     ++   PL       G +  V     +   L T  G  D  +++W      
Sbjct:   332 IVNVWPSGPGESGWAPLQTFTQHQGAVKAVAWCPWQSNILATGGGTSDRHIRIWNVCSGA 391

Query:   397 LIEELKIHQERILSAVLSPDQTCVAAAS--ADETISIWNCFP 436
              +  + +H + + S + SP    + +    A   + IW  +P
Sbjct:   392 CLSAVDVHSQ-VCSILWSPHYKELISGHGFAQNQLVIWK-YP 431

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=IEA

GO:0005813 "centrosome" evidence=ISO

GO:0005856 "cytoskeleton" evidence=IEA

GO:0007049 "cell cycle" evidence=IEA

GO:0007067 "mitosis" evidence=IEA

GO:0007399 "nervous system development" evidence=IEA

GO:0008022 "protein C-terminus binding" evidence=ISO

GO:0008284 "positive regulation of cell proliferation" evidence=ISO

GO:0019899 "enzyme binding" evidence=ISO

GO:0030154 "cell differentiation" evidence=IEA

GO:0031145 "anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process" evidence=ISO

GO:0031915 "positive regulation of synaptic plasticity" evidence=IDA

GO:0040020 "regulation of meiosis" evidence=IGI

GO:0043234 "protein complex" evidence=ISO

GO:0048471 "perinuclear region of cytoplasm" evidence=ISO

GO:0050773 "regulation of dendrite development" evidence=ISO

GO:0051301 "cell division" evidence=IEA

GO:0051488 "activation of anaphase-promoting complex activity" evidence=ISO

GO:0090129 "positive regulation of synapse maturation" evidence=IDA

UNIPROTKB|Q5ZI36 CDC20 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 350 (128.3 bits), Expect = 7.5e-31, P = 7.5e-31
 Identities = 87/238 (36%), Positives = 131/238 (55%)

Query:   136 REQKKRRHLSFLLHGFEIDRKKVLNQS-KRTVSPTQFLRTLGKL------P---RK---- 181
             +EQ+K   ++  L+GF+++  K+L  S K   +P  +   L  L      P   RK    
Sbjct:   117 KEQQKSWAMN--LNGFDVEEAKILRLSGKPQNAPEGYQNNLKVLYSQKTTPASSRKHGRY 174

Query:   182 VKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDN 241
             + + P+RIL+AP I ND+Y + +DW   + LAVALD  VY WN  T +   L++    D+
Sbjct:   175 IPSMPDRILDAPEIRNDYYLNLIDWSSQNFLAVALDNCVYLWNHSTGEIIQLLQIENPDD 234

Query:   242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGT 301
              Y+S V+W      LAV     E + LW  Q+++ ++ + +H  +V ++ WN  +LS G+
Sbjct:   235 -YVSSVSWIKEGNYLAVGTRNAE-VQLWDVQQQKRLRSMTSHSSRVGSLSWNSYILSSGS 292

Query:   302 IGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN-NTVKIWDFRQLDA 358
               G+I H+DVR    +   +T     VCGLKWS +GRYLASG N N V IW   Q D+
Sbjct:   293 RTGHIHHHDVRVAEHHVATLTGHTQEVCGLKWSLDGRYLASGGNDNLVNIWPSVQGDS 350

GO:0005680 "anaphase-promoting complex" evidence=IEA

GO:0008022 "protein C-terminus binding" evidence=IEA

GO:0019899 "enzyme binding" evidence=IEA

GO:0031145 "anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process" evidence=IEA

GO:0031915 "positive regulation of synaptic plasticity" evidence=IEA

GO:0040020 "regulation of meiosis" evidence=IEA

GO:0051488 "activation of anaphase-promoting complex activity" evidence=IEA

GO:0090129 "positive regulation of synapse maturation" evidence=IEA

RGD|620477 Cdc20 "cell division cycle 20" [Rattus norvegicus (taxid:10116)]

 Score = 346 (126.9 bits), Expect = 2.5e-30, P = 2.5e-30
 Identities = 79/205 (38%), Positives = 118/205 (57%)

Query:   150 GFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYH 209
             G++ +R KVL   K T   ++      K  R + + P+RIL+AP I ND+Y + +DW   
Sbjct:   143 GYQ-NRLKVLYSQKATPGSSR------KACRYIPSLPDRILDAPEIRNDYYLNLVDWSSG 195

Query:   210 DTLAVALDTSVYTWNTKTNKT-QLL-VEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYID 267
             + LAVALD SVY WN  +    QLL +E P     YIS VAW      LAV  +  E + 
Sbjct:   196 NVLAVALDNSVYLWNAGSGDILQLLQMEQP---GDYISSVAWIKEGNYLAVGTSNAE-VQ 251

Query:   268 LWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDV 327
             LW  Q+++ ++ + +H  +V ++ WN  +LS G+  G+I H+DVR    +   ++     
Sbjct:   252 LWDVQQQKRLRNMTSHSARVSSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQE 311

Query:   328 VCGLKWSPNGRYLASGSN-NTVKIW 351
             VCGL+W+P+GR+LASG N N V +W
Sbjct:   312 VCGLRWAPDGRHLASGGNDNIVNVW 336

GO:0000922 "spindle pole" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005680 "anaphase-promoting complex" evidence=IEA;ISO;ISS

GO:0005813 "centrosome" evidence=IDA

GO:0007067 "mitosis" evidence=IEA

GO:0008022 "protein C-terminus binding" evidence=IEA;ISO

GO:0008284 "positive regulation of cell proliferation" evidence=IMP

GO:0016567 "protein ubiquitination" evidence=IEA

GO:0019899 "enzyme binding" evidence=IEA;ISO

GO:0031145 "anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process" evidence=IEA;ISO

GO:0031915 "positive regulation of synaptic plasticity" evidence=IEA;ISO;ISS

GO:0040020 "regulation of meiosis" evidence=IEA;ISO

GO:0043234 "protein complex" evidence=IDA

GO:0048471 "perinuclear region of cytoplasm" evidence=IDA

GO:0050773 "regulation of dendrite development" evidence=IMP

GO:0051301 "cell division" evidence=IEA

GO:0051488 "activation of anaphase-promoting complex activity" evidence=IEA;ISO;ISS

GO:0090129 "positive regulation of synapse maturation" evidence=IEA;ISO;ISS

UNIPROTKB|Q62623 Cdc20 "Cell division cycle protein 20 homolog" [Rattus norvegicus (taxid:10116)]

 Score = 346 (126.9 bits), Expect = 2.5e-30, P = 2.5e-30
 Identities = 79/205 (38%), Positives = 118/205 (57%)

Query:   150 GFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYH 209
             G++ +R KVL   K T   ++      K  R + + P+RIL+AP I ND+Y + +DW   
Sbjct:   143 GYQ-NRLKVLYSQKATPGSSR------KACRYIPSLPDRILDAPEIRNDYYLNLVDWSSG 195

Query:   210 DTLAVALDTSVYTWNTKTNKT-QLL-VEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYID 267
             + LAVALD SVY WN  +    QLL +E P     YIS VAW      LAV  +  E + 
Sbjct:   196 NVLAVALDNSVYLWNAGSGDILQLLQMEQP---GDYISSVAWIKEGNYLAVGTSNAE-VQ 251

Query:   268 LWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDV 327
             LW  Q+++ ++ + +H  +V ++ WN  +LS G+  G+I H+DVR    +   ++     
Sbjct:   252 LWDVQQQKRLRNMTSHSARVSSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQE 311

Query:   328 VCGLKWSPNGRYLASGSN-NTVKIW 351
             VCGL+W+P+GR+LASG N N V +W
Sbjct:   312 VCGLRWAPDGRHLASGGNDNIVNVW 336

GO:0008022 "protein C-terminus binding" evidence=IEA

GO:0019899 "enzyme binding" evidence=IEA

GO:0031145 "anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process" evidence=IEA

GO:0040020 "regulation of meiosis" evidence=IEA

DICTYBASE|DDB_G0287259 cdh1 "cdc20/fizzy domain-containing protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 332 (121.9 bits), Expect = 1.6e-27, P = 1.6e-27
 Identities = 85/263 (32%), Positives = 129/263 (49%)

Query:   177 KLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEY 236
             K  RK+   P +IL+AP I +DFY + +DW  H+ LAV LDTSVY WN  T++   L E 
Sbjct:   392 KPQRKISKTPIKILDAPMIKDDFYLNLIDWSSHNILAVGLDTSVYLWNATTSQVSKLCEM 451

Query:   237 PTYDNAYISCVAWKPRT-TDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGN 295
              +     +S V W  R    LA+  T    + +W   +++ I++L+ H  +V A+ WN +
Sbjct:   452 ES--GQPVSSVGWIQRGGIHLAIGGT-DGVVSIWDVNKKKKIRELQGHNTRVNALAWNNH 508

Query:   296 LLSCGTIGGNILHYDVRTHSD-YPTAITREGDVVCGLKWSPNGRYLASGSN-NTVKIWDF 353
             +LS G     ILH+DVR  S+ Y   +      +CGLKWSP+G+ LASG N N + +WD 
Sbjct:   509 ILSSGGKDKVILHHDVRDCSNNYTNRLVGHRHEICGLKWSPDGQQLASGGNDNLLNVWDH 568

Query:   354 RQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVL 413
                   +      P         ++   +Q  + K    P    + + K H   + +   
Sbjct:   569 SMTQQPQQQHQPPPPPPSSNTSSISQQQQQQNTSK----P----LYQFKFHYAAVKAIAW 620

Query:   414 SPDQTCVAAASA---DETISIWN 433
             SP Q  + A+     D+ I  WN
Sbjct:   621 SPHQRGLLASGGGTHDKCIRFWN 643

GO:0051301 "cell division" evidence=IEA

GO:0007067 "mitosis" evidence=IEA

GO:0007049 "cell cycle" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0016567 "protein ubiquitination" evidence=IEA

TAIR|locus:2143636 CDC20.5 "AT5G27570" [Arabidopsis thaliana (taxid:3702)]

 Score = 310 (114.2 bits), Expect = 2.1e-27, P = 2.1e-27
 Identities = 72/211 (34%), Positives = 111/211 (52%)

Query:   154 DRKKVLNQSKRTVSPTQFLRTLGKLPRK-VKAKPERILEAPSIINDFYTSGLDWGYHDTL 212
             ++ K L  S  +  P Q  + +   PR+ +    ER+L+AP I +DFY + LDWG  + L
Sbjct:    49 NKPKALLSSNHSDPPHQ--QPISVKPRRYIPQNSERVLDAPGIADDFYLNLLDWGSSNVL 106

Query:   213 AVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQ 272
             A+AL  +VY W+  +  T  LV     +   ++ + W     DLA+    +E + LW   
Sbjct:   107 AIALGDTVYLWDASSGSTYKLVTIDEEEGP-VTSINWTQDGLDLAIGLDNSE-VQLWDCV 164

Query:   273 EERLIQKLRT-HMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGL 331
               R ++ LR  H  +V ++ WN ++L+ G + G I++ DVR  S          + VCGL
Sbjct:   165 SNRQVRTLRGGHESRVGSLAWNNHILTTGGMDGKIVNNDVRIRSSIVETYLGHTEEVCGL 224

Query:   332 KWSPNGRYLASGSN-NTVKIWDFRQLDAKRP 361
             KWS +G+ LASG N N V IWD R + +  P
Sbjct:   225 KWSESGKKLASGGNDNVVHIWDHRSVASSNP 255

GO:0004871 "signal transducer activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005834 "heterotrimeric G-protein complex" evidence=ISS

GO:0007165 "signal transduction" evidence=ISS

GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS

GO:0005634 "nucleus" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	488
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	4e-24
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	3e-21
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	2e-18
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	1e-15
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	2e-14
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	1e-13
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	1e-11
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	6e-11
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	2e-10
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	2e-09
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	1e-07
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	2e-07
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	4e-06
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	4e-05
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	4e-05
smart00320	40	smart00320, WD40, WD40 repeats	9e-05
smart00320	40	smart00320, WD40, WD40 repeats	9e-05
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	4e-04
smart00320	40	smart00320, WD40, WD40 repeats	4e-04
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	0.001

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score =  104 bits (260), Expect = 4e-24
 Identities = 90/432 (20%), Positives = 155/432 (35%), Gaps = 46/432 (10%)

Query: 16  NILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNN-TVKIWDFRQLDAKRPQV 74
            +    V         +    D +  + +SP+G  L SGS++ T+K+WD    +     +
Sbjct: 45  LLSDSLVSLPDLSSLLLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSL 104

Query: 75  NNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETIS 134
               H S+V  +A    +   +       D TV+LW+     +                 
Sbjct: 105 EGL-HDSSVSKLALSSPDGNSILLASSSLDGTVKLWDLSTPGKLIRT------------- 150

Query: 135 YREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPS 194
                         H   +         K   S +    T+ KL      KP   L   +
Sbjct: 151 -----------LEGHSESVTSLAFSPDGKLLASGSSLDGTI-KLWDLRTGKPLSTLAGHT 198

Query: 195 IINDFYTSGLDWGYHDTLAVA---LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKP 251
                  S L +     L +A    D ++  W+  T K    +   T      S V+   
Sbjct: 199 D----PVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGK----LLRSTLSGHSDSVVSSFS 250

Query: 252 RTTDLAVTNTCTEYIDLWH-EQEERLIQKLRTHMHQVIAMCWN--GNLLSCGTIGGNILH 308
               L  + +    I LW       L++ L  H   V+++ ++  G LL+ G+  G +  
Sbjct: 251 PDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRL 310

Query: 309 YDVRTHSD-YPTAITREGDVVCGLKWSPNGRYLASG--SNNTVKIWDFRQLDAKRPLGLI 365
           +D+ T        +      V  L +SP+G  L SG   + T+++WD R     + L   
Sbjct: 311 WDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGH 370

Query: 366 --VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAA 423
             V  +       V S G  D ++++W+     L+  L  H  R+ S   SPD   +A+ 
Sbjct: 371 SNVLSVSFSPDGRVVSSGSTDGTVRLWDLSTGSLLRNLDGHTSRVTSLDFSPDGKSLASG 430

Query: 424 SADETISIWNCF 435
           S+D TI +W+  
Sbjct: 431 SSDNTIRLWDLK 442

Length = 466

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 95.9 bits (237), Expect = 3e-21
 Identities = 77/359 (21%), Positives = 142/359 (39%), Gaps = 43/359 (11%)

Query: 7   LLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN--NTVKIWDF 64
           LL+  ++ G +  +D+ T       +    + V  L +SP+G+ LASGS+   T+K+WD 
Sbjct: 126 LLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDL 185

Query: 65  RQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTD 124
           R     +P      H   V ++A+ P    L+A+G    D T+RLW+   GK        
Sbjct: 186 RT---GKPLSTLAGHTDPVSSLAFSPDGGLLIASGS--SDGTIRLWDLSTGKLL------ 234

Query: 125 SQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKA 184
                             H   ++  F  D   +      + S    +R           
Sbjct: 235 ------------RSTLSGHSDSVVSSFSPDGSLLA-----SGSSDGTIRLW-------DL 270

Query: 185 KPERILEAPSIINDFYTSGLDW-GYHDTLAVA-LDTSVYTWNTKTNKTQLLVEYPTYDNA 242
           +    L      +      + +      LA    D +V  W+ +T K    +    ++  
Sbjct: 271 RSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGP 330

Query: 243 YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTH-MHQVIAMCWNGNLLSCGT 301
            +S +++ P  + L    +    I LW  +  + ++ L  H     ++   +G ++S G+
Sbjct: 331 -VSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGHSNVLSVSFSPDGRVVSSGS 389

Query: 302 IGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAK 359
             G +  +D+ T S     +      V  L +SP+G+ LASGS +NT+++WD +     
Sbjct: 390 TDGTVRLWDLSTGSLLRN-LDGHTSRVTSLDFSPDGKSLASGSSDNTIRLWDLKTSLKS 447

Length = 466

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 85.1 bits (211), Expect = 2e-18
 Identities = 56/236 (23%), Positives = 105/236 (44%), Gaps = 27/236 (11%)

Query: 212 LAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVT----NTCTEYID 267
            + + D ++  W+ +T +   +     + + Y+S VA+ P    +  +     T      
Sbjct: 67  ASGSSDKTIRLWDLETGE--CVRTLTGHTS-YVSSVAFSP-DGRILSSSSRDKTIK---- 118

Query: 268 LWHEQEERLIQKLRTHMHQV--IAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREG 325
           +W  +  + +  LR H   V  +A   +G  ++  +  G I  +D+RT     T     G
Sbjct: 119 VWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTG 178

Query: 326 DVVCGLKWSPNG-RYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKR-------EGRELV 377
           +V   + +SP+G + L+S S+ T+K+WD   L   + LG +                 L+
Sbjct: 179 EVNS-VAFSPDGEKLLSSSSDGTIKLWD---LSTGKCLGTLRGHENGVNSVAFSPDGYLL 234

Query: 378 TSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWN 433
            S G +D ++++W+      ++ L  H   + S   SPD   +A+ SAD TI IW+
Sbjct: 235 AS-GSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289

Length = 289

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 79.0 bits (193), Expect = 1e-15
 Identities = 59/333 (17%), Positives = 117/333 (35%), Gaps = 19/333 (5%)

Query: 133 ISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEA 192
            S   + K + L     G  ++   +L+                 L          +   
Sbjct: 5   SSTSSENKSKLLKKSELGPSLNSLSLLSLGSSESGILLLALLSDSLVSLPDLSSLLLRGH 64

Query: 193 PSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPR 252
              I     S         L+ + D ++  W+    +  +      +D++        P 
Sbjct: 65  EDSITSIAFSPDG---ELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPD 121

Query: 253 TTDLAVTNTCTE-YIDLWHEQEE-RLIQKLRTHMHQVIAMCWNGN---LLSCGTIGGNIL 307
              + + ++  +  + LW      +LI+ L  H   V ++ ++ +   L S  ++ G I 
Sbjct: 122 GNSILLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIK 181

Query: 308 HYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLAS--GSNNTVKIWDFRQLDAKRPL--- 362
            +D+RT     T       V   L +SP+G  L +   S+ T+++WD       R     
Sbjct: 182 LWDLRTGKPLSTLAGHTDPVSS-LAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSG 240

Query: 363 --GLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLH-LIEELKIHQERILSAVLSPDQTC 419
               +V     +G  L +  G  D ++++W+      L+  L  H   +LS   SPD   
Sbjct: 241 HSDSVVSSFSPDGSLLAS--GSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKL 298

Query: 420 VAAASADETISIWNCFPRDKKRKARQVGSGSSL 452
           +A+ S+D T+ +W+             G    +
Sbjct: 299 LASGSSDGTVRLWDLETGKLLSSLTLKGHEGPV 331

Length = 466

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 75.1 bits (183), Expect = 2e-14
 Identities = 82/394 (20%), Positives = 146/394 (37%), Gaps = 77/394 (19%)

Query: 79  HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQ 138
           H  ++ +IA+ P    LL+      D T++LW+  NG++          ++   ++    
Sbjct: 64  HEDSITSIAFSPDGELLLSGSS---DGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSP 120

Query: 139 KKRRHLSFLLHGFEIDRK-KVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIIN 197
                 S LL    +D   K+ +           L T GKL R ++   E +        
Sbjct: 121 DGN---SILLASSSLDGTVKLWD-----------LSTPGKLIRTLEGHSESV-------- 158

Query: 198 DFYTSGLDW---GYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTT 254
               + L +   G       +LD ++  W+ +T K    +   T     +S +A+ P   
Sbjct: 159 ----TSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHT---DPVSSLAFSPDGG 211

Query: 255 DLAVTNTCTEYIDLWHEQEERLIQ-KLRTHMHQVI-AMCWNGNLLSCGTIGGNILHYDVR 312
            L  + +    I LW     +L++  L  H   V+ +   +G+LL+ G+  G I  +D+R
Sbjct: 212 LLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSVVSSFSPDGSLLASGSSDGTIRLWDLR 271

Query: 313 THSDYPTAITREGDVVCGLKWSPNGRYLASGSN-NTVKIWDFRQLDAKRPLGLIVPKLKR 371
           + S     ++     V  + +SP+G+ LASGS+  TV++WD         L L       
Sbjct: 272 SSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLK------ 325

Query: 372 EGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPD-QTCVAAASADETIS 430
                                           H+  + S   SPD    V+  S D TI 
Sbjct: 326 -------------------------------GHEGPVSSLSFSPDGSLLVSGGSDDGTIR 354

Query: 431 IWNCFPRDKKRKARQVGSGSSLEFAILKQPVSLT 464
           +W+       +      +  S+ F+   + VS  
Sbjct: 355 LWDLRTGKPLKTLEGHSNVLSVSFSPDGRVVSSG 388

Length = 466

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 71.2 bits (175), Expect = 1e-13
 Identities = 47/212 (22%), Positives = 81/212 (38%), Gaps = 34/212 (16%)

Query: 241 NAYISCVAWKPRTTDLAVT----NTCTEYIDLWHEQEERLIQKLRTH---MHQVIAMCWN 293
              ++CVA+ P    L  T     T    I +W  +   L++ L+ H   +  V A    
Sbjct: 9   TGGVTCVAFSP-DGKLLATGSGDGT----IKVWDLETGELLRTLKGHTGPVRDVAASADG 63

Query: 294 GNLLSCGT--------IGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS- 344
             L S  +        +        +  H+ Y          V  + +SP+GR L+S S 
Sbjct: 64  TYLASGSSDKTIRLWDLETGECVRTLTGHTSY----------VSSVAFSPDGRILSSSSR 113

Query: 345 NNTVKIWDFRQLDAKRPLGLI---VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEEL 401
           + T+K+WD         L      V  +         +   QD ++K+W+      +  L
Sbjct: 114 DKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATL 173

Query: 402 KIHQERILSAVLSPDQTCVAAASADETISIWN 433
             H   + S   SPD   + ++S+D TI +W+
Sbjct: 174 TGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWD 205

Length = 289

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 66.3 bits (160), Expect = 1e-11
 Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 4/118 (3%)

Query: 2   CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN-NTVK 60
             +G+LL+ G+  G I  +D+R+ S     ++     V  + +SP+G+ LASGS+  TV+
Sbjct: 250 SPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVR 309

Query: 61  IWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEK 118
           +WD          +  + H   V ++++ P    L++ G    D T+RLW+   GK  
Sbjct: 310 LWDLETGK-LLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSD--DGTIRLWDLRTGKPL 364

Length = 466

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 62.7 bits (153), Expect = 6e-11
 Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 7/82 (8%)

Query: 37  DVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTL 95
             V  + +SP+G+ LA+GS + T+K+WD    +  R       H   V+ +A       L
Sbjct: 10  GGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKG---HTGPVRDVAASADGTYL 66

Query: 96  LATGGGICDQTVRLWNSMNGKE 117
            +      D+T+RLW+   G+ 
Sbjct: 67  ASGS---SDKTIRLWDLETGEC 85

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 61.2 bits (149), Expect = 2e-10
 Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 23/172 (13%)

Query: 276 LIQKLRTHMHQVIAMCWN--GNLLSCGTIGGNILHYDVRTHSDYPTAITREG--DVVCGL 331
           L + L+ H   V  + ++  G LL+ G+  G I  +D+ T        T +G    V  +
Sbjct: 1   LRRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELL---RTLKGHTGPVRDV 57

Query: 332 KWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLG---------LIVPKLKREGRELVTSHG 381
             S +G YLASGS + T+++WD    +  R L             P        +++S  
Sbjct: 58  AASADGTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPD-----GRILSS-S 111

Query: 382 KQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWN 433
            +D ++K+W+      +  L+ H + + S   SPD T VA++S D TI +W+
Sbjct: 112 SRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWD 163

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 58.5 bits (142), Expect = 2e-09
 Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 12/120 (10%)

Query: 3   WNGNLLSCGTIGGNILHYDVRTHSDYPTAITREG--DVVCGLKWSPNGRYLASGS-NNTV 59
            +G +LS  +    I  +DV T        T  G  D V  + +SP+G ++AS S + T+
Sbjct: 103 PDGRILSSSSRDKTIKVWDVET---GKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTI 159

Query: 60  KIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKC 119
           K+WD R     +       H   V ++A+ P    LL++     D T++LW+   GK   
Sbjct: 160 KLWDLRTG---KCVATLTGHTGEVNSVAFSPDGEKLLSSSS---DGTIKLWDLSTGKCLG 213

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 52.7 bits (127), Expect = 1e-07
 Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 8/116 (6%)

Query: 4   NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNG-RYLASGSNNTVKIW 62
           +G  ++  +  G I  +D+RT     T     G+V   + +SP+G + L+S S+ T+K+W
Sbjct: 146 DGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNS-VAFSPDGEKLLSSSSDGTIKLW 204

Query: 63  DFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEK 118
           D   L   +     + H + V ++A+ P     L   G   D T+R+W+   G+  
Sbjct: 205 D---LSTGKCLGTLRGHENGVNSVAFSPD--GYLLASGSE-DGTIRVWDLRTGECV 254

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 52.3 bits (126), Expect = 2e-07
 Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 7/74 (9%)

Query: 39  VCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLA 97
           V  + +SP+G  LASGS + T+++WD   L           H ++V ++AW P +   LA
Sbjct: 222 VNSVAFSPDGYLLASGSEDGTIRVWD---LRTGECVQTLSGHTNSVTSLAWSP-DGKRLA 277

Query: 98  TGGGICDQTVRLWN 111
           +G    D T+R+W+
Sbjct: 278 SGSA--DGTIRIWD 289

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 48.1 bits (115), Expect = 4e-06
 Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 7/81 (8%)

Query: 39  VCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLA 97
           V  +  S +G YLASGS + T+++WD    +  R       H S V ++A+ P +  +L+
Sbjct: 54  VRDVAASADGTYLASGSSDKTIRLWDLETGECVRTLT---GHTSYVSSVAFSP-DGRILS 109

Query: 98  TGGGICDQTVRLWNSMNGKEK 118
           +     D+T+++W+   GK  
Sbjct: 110 SSSR--DKTIKVWDVETGKCL 128

Length = 289

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 40.4 bits (95), Expect = 4e-05
 Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)

Query: 37 DVVCGLKWSPNGRYLASGS-NNTVKIWD 63
            V  + +SP+G  LASGS + TV++WD
Sbjct: 12 GPVTSVAFSPDGNLLASGSDDGTVRVWD 39

Length = 39

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 40.4 bits (95), Expect = 4e-05
 Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)

Query: 326 DVVCGLKWSPNGRYLASGS-NNTVKIWD 352
             V  + +SP+G  LASGS + TV++WD
Sbjct: 12  GPVTSVAFSPDGNLLASGSDDGTVRVWD 39

Length = 39

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 39.2 bits (92), Expect = 9e-05
 Identities = 14/28 (50%), Positives = 21/28 (75%), Gaps = 1/28 (3%)

Query: 37 DVVCGLKWSPNGRYLASGS-NNTVKIWD 63
            V  + +SP+G+YLASGS + T+K+WD
Sbjct: 13 GPVTSVAFSPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 39.2 bits (92), Expect = 9e-05
 Identities = 14/28 (50%), Positives = 21/28 (75%), Gaps = 1/28 (3%)

Query: 326 DVVCGLKWSPNGRYLASGS-NNTVKIWD 352
             V  + +SP+G+YLASGS + T+K+WD
Sbjct: 13  GPVTSVAFSPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 41.9 bits (99), Expect = 4e-04
 Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 2/63 (3%)

Query: 2   CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVK 60
             +G LL+ G+  G I  +D+RT     T       V   L WSP+G+ LASGS + T++
Sbjct: 228 SPDGYLLASGSEDGTIRVWDLRTGECVQTLSGHTNSVTS-LAWSPDGKRLASGSADGTIR 286

Query: 61  IWD 63
           IWD
Sbjct: 287 IWD 289

Length = 289

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 37.7 bits (88), Expect = 4e-04
 Identities = 14/38 (36%), Positives = 21/38 (55%)

Query: 396 HLIEELKIHQERILSAVLSPDQTCVAAASADETISIWN 433
            L++ LK H   + S   SPD   +A+ S D TI +W+
Sbjct: 3   ELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 36.2 bits (84), Expect = 0.001
 Identities = 13/37 (35%), Positives = 20/37 (54%)

Query: 397 LIEELKIHQERILSAVLSPDQTCVAAASADETISIWN 433
           L+  LK H   + S   SPD   +A+ S D T+ +W+
Sbjct: 3   LLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39

Length = 39

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	488
KOG0271|consensus	480		100.0
KOG0271|consensus	480		100.0
KOG0318|consensus	603		100.0
KOG0291|consensus	893		100.0
KOG0319|consensus	775		100.0
KOG0272|consensus	459		100.0
KOG0318|consensus	603		100.0
KOG0306|consensus	888		100.0
KOG0286|consensus	343		100.0
KOG0315|consensus	311		100.0
KOG0272|consensus	459		100.0
KOG0319|consensus	775		100.0
KOG0291|consensus	893		100.0
KOG0286|consensus	343		100.0
KOG0265|consensus	338		100.0
KOG0279|consensus	315		100.0
KOG0306|consensus	888		100.0
KOG0273|consensus	524		100.0
KOG0273|consensus	524		100.0
KOG0293|consensus	519		100.0
KOG0296|consensus	399		100.0
KOG0295|consensus	406		100.0
KOG0282|consensus	503		100.0
KOG0315|consensus	311		100.0
KOG0284|consensus	464		100.0
KOG0279|consensus	315		100.0
KOG0645|consensus	312		100.0
KOG0285|consensus	460		100.0
KOG0266|consensus	456		100.0
KOG0281|consensus	499		100.0
KOG0263|consensus	707		100.0
KOG1408|consensus	1080		100.0
KOG0263|consensus	707		100.0
KOG0284|consensus	464		100.0
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	100.0
KOG0293|consensus	519		100.0
KOG0295|consensus	406		100.0
KOG0645|consensus	312		100.0
PLN00181	793	protein SPA1-RELATED; Provisional	100.0
KOG0278|consensus	334		100.0
KOG1539|consensus	910		100.0
KOG0316|consensus	307		100.0
KOG0296|consensus	399		100.0
KOG0292|consensus	1202		100.0
KOG0265|consensus	338		100.0
KOG0266|consensus	456		100.0
KOG0285|consensus	460		100.0
KOG0643|consensus	327		100.0
KOG0276|consensus	794		100.0
KOG0316|consensus	307		100.0
KOG2106|consensus	626		100.0
KOG0305|consensus	484		100.0
KOG0305|consensus	484		100.0
KOG1407|consensus	313		100.0
KOG0276|consensus	794		100.0
KOG0313|consensus	423		100.0
KOG1539|consensus	910		100.0
KOG1408|consensus	1080		100.0
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	100.0
KOG0275|consensus	508		100.0
KOG0281|consensus	499		100.0
KOG0282|consensus	503		100.0
KOG0772|consensus	641		100.0
KOG1446|consensus	311		100.0
KOG0640|consensus	430		100.0
KOG0277|consensus	311		100.0
KOG0274|consensus	537		100.0
KOG0288|consensus	459		100.0
KOG0292|consensus	1202		100.0
PLN00181	793	protein SPA1-RELATED; Provisional	100.0
KOG0289|consensus	506		99.98
KOG0275|consensus	508		99.98
KOG1063|consensus	764		99.98
KOG1407|consensus	313		99.97
PTZ00421	493	coronin; Provisional	99.97
KOG0283|consensus	712		99.97
KOG1063|consensus	764		99.97
KOG0268|consensus	433		99.97
KOG0278|consensus	334		99.97
KOG0310|consensus	487		99.97
KOG0647|consensus	347		99.97
KOG0308|consensus	735		99.97
KOG2096|consensus	420		99.97
PTZ00420	568	coronin; Provisional	99.97
KOG2106|consensus	626		99.97
KOG2048|consensus	691		99.97
KOG0973|consensus	942		99.97
KOG0313|consensus	423		99.97
KOG0277|consensus	311		99.97
KOG0973|consensus	942		99.97
PTZ00421	493	coronin; Provisional	99.97
KOG0299|consensus	479		99.97
KOG0310|consensus	487		99.97
KOG0640|consensus	430		99.97
KOG1446|consensus	311		99.96
KOG0647|consensus	347		99.96
KOG0283|consensus	712		99.96
KOG1036|consensus	323		99.96
KOG0300|consensus	481		99.96
KOG4283|consensus	397		99.96
KOG0294|consensus	362		99.96
KOG0288|consensus	459		99.96
KOG0294|consensus	362		99.96
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.96
PTZ00420	568	coronin; Provisional	99.96
KOG0646|consensus	476		99.96
KOG2055|consensus	514		99.96
KOG0264|consensus	422		99.96
KOG0643|consensus	327		99.96
KOG0641|consensus	350		99.96
KOG0299|consensus	479		99.96
KOG0264|consensus	422		99.96
KOG0641|consensus	350		99.96
KOG1273|consensus	405		99.95
KOG0639|consensus	705		99.95
KOG2048|consensus	691		99.95
KOG0772|consensus	641		99.95
KOG1445|consensus	1012		99.95
KOG1332|consensus	299		99.95
KOG0301|consensus	745		99.95
KOG0274|consensus	537		99.95
KOG1274|consensus	933		99.95
KOG0308|consensus	735		99.95
KOG1332|consensus	299		99.95
KOG0268|consensus	433		99.95
KOG0300|consensus	481		99.94
KOG0301|consensus	745		99.94
KOG1036|consensus	323		99.94
KOG2445|consensus	361		99.94
KOG0289|consensus	506		99.94
KOG0639|consensus	705		99.94
KOG0269|consensus	839		99.93
KOG1273|consensus	405		99.93
KOG0321|consensus	720		99.93
KOG2096|consensus	420		99.93
KOG0321|consensus	720		99.93
KOG4328|consensus	498		99.92
KOG0646|consensus	476		99.92
KOG0650|consensus	733		99.92
KOG1274|consensus	933		99.92
KOG0267|consensus	825		99.92
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.92
KOG0270|consensus	463		99.92
KOG0269|consensus	839		99.92
KOG1445|consensus	1012		99.91
KOG4378|consensus	673		99.91
KOG1538|consensus	1081		99.91
KOG2055|consensus	514		99.91
KOG0267|consensus	825		99.91
KOG0302|consensus	440		99.91
KOG4378|consensus	673		99.9
KOG2919|consensus	406		99.9
KOG1963|consensus	792		99.9
KOG1034|consensus	385		99.9
KOG1007|consensus	370		99.9
KOG0270|consensus	463		99.9
KOG4328|consensus	498		99.89
KOG4283|consensus	397		99.89
KOG1034|consensus	385		99.89
KOG1009|consensus	434		99.89
KOG0322|consensus	323		99.88
KOG1188|consensus	376		99.88
KOG2445|consensus	361		99.88
KOG0307|consensus	1049		99.88
KOG4497|consensus	447		99.87
KOG0650|consensus	733		99.87
COG2319	466	FOG: WD40 repeat [General function prediction only	99.87
KOG0302|consensus	440		99.87
COG2319	466	FOG: WD40 repeat [General function prediction only	99.87
KOG2919|consensus	406		99.87
PRK11028	330	6-phosphogluconolactonase; Provisional	99.86
KOG0649|consensus	325		99.86
KOG0290|consensus	364		99.86
KOG0649|consensus	325		99.86
KOG1310|consensus	758		99.86
KOG1538|consensus	1081		99.86
KOG1963|consensus	792		99.86
KOG4227|consensus	609		99.85
KOG1587|consensus	555		99.85
KOG0307|consensus	1049		99.85
KOG0303|consensus	472		99.84
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.84
KOG0303|consensus	472		99.83
KOG4497|consensus	447		99.83
KOG1517|consensus	1387		99.82
KOG1009|consensus	434		99.82
KOG0290|consensus	364		99.82
KOG2110|consensus	391		99.81
KOG1007|consensus	370		99.81
KOG0642|consensus	577		99.81
KOG1188|consensus	376		99.8
KOG0644|consensus	1113		99.8
KOG1334|consensus	559		99.79
KOG4227|consensus	609		99.79
KOG2315|consensus	566		99.79
KOG0644|consensus	1113		99.79
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.78
KOG0322|consensus	323		99.78
PRK11028	330	6-phosphogluconolactonase; Provisional	99.78
KOG1587|consensus	555		99.78
PRK01742	429	tolB translocation protein TolB; Provisional	99.78
KOG0642|consensus	577		99.77
KOG1524|consensus	737		99.77
PRK01742	429	tolB translocation protein TolB; Provisional	99.77
KOG2110|consensus	391		99.77
KOG0771|consensus	398		99.77
KOG1517|consensus	1387		99.77
KOG2111|consensus	346		99.74
KOG2321|consensus	703		99.74
KOG2139|consensus	445		99.74
KOG1334|consensus	559		99.74
KOG2139|consensus	445		99.74
KOG2394|consensus	636		99.73
KOG1240|consensus	1431		99.73
PRK03629	429	tolB translocation protein TolB; Provisional	99.73
KOG2111|consensus	346		99.73
KOG1912|consensus	1062		99.71
KOG1524|consensus	737		99.7
KOG3881|consensus	412		99.7
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	99.7
KOG2314|consensus	698		99.7
PRK04922	433	tolB translocation protein TolB; Provisional	99.7
KOG1523|consensus	361		99.69
PRK03629	429	tolB translocation protein TolB; Provisional	99.69
KOG0771|consensus	398		99.69
PRK02889	427	tolB translocation protein TolB; Provisional	99.69
KOG1272|consensus	545		99.69
PRK05137	435	tolB translocation protein TolB; Provisional	99.68
PRK02889	427	tolB translocation protein TolB; Provisional	99.68
PRK04922	433	tolB translocation protein TolB; Provisional	99.67
KOG1523|consensus	361		99.65
KOG3881|consensus	412		99.64
KOG1272|consensus	545		99.63
KOG1354|consensus	433		99.63
KOG2315|consensus	566		99.63
KOG1310|consensus	758		99.63
KOG2321|consensus	703		99.62
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	99.61
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	99.61
PRK05137	435	tolB translocation protein TolB; Provisional	99.61
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	99.61
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	99.58
COG4946	668	Uncharacterized protein related to the periplasmic	99.58
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.58
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.57
COG4946	668	Uncharacterized protein related to the periplasmic	99.57
KOG2394|consensus	636		99.57
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	99.57
PRK01029	428	tolB translocation protein TolB; Provisional	99.56
PRK04792	448	tolB translocation protein TolB; Provisional	99.56
KOG1240|consensus	1431		99.55
PRK00178	430	tolB translocation protein TolB; Provisional	99.55
KOG1409|consensus	404		99.55
KOG2314|consensus	698		99.54
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	99.54
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.5
KOG0974|consensus	967		99.5
KOG1354|consensus	433		99.49
KOG0974|consensus	967		99.49
PRK00178	430	tolB translocation protein TolB; Provisional	99.48
PRK04792	448	tolB translocation protein TolB; Provisional	99.48
PRK01029	428	tolB translocation protein TolB; Provisional	99.47
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.47
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	99.46
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	99.44
KOG0280|consensus	339		99.44
KOG4547|consensus	541		99.43
KOG0309|consensus	1081		99.42
KOG1912|consensus	1062		99.42
KOG4547|consensus	541		99.39
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	99.37
KOG2041|consensus	1189		99.37
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	99.36
KOG2041|consensus	1189		99.36
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	99.35
PRK04043	419	tolB translocation protein TolB; Provisional	99.34
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	99.28
KOG1064|consensus	2439		99.28
KOG1064|consensus	2439		99.27
KOG4190|consensus	1034		99.24
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	99.22
KOG0280|consensus	339		99.19
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.19
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	99.16
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.16
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	99.15
KOG1409|consensus	404		99.13
PRK04043	419	tolB translocation protein TolB; Provisional	99.06
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	99.06
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	99.02
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	99.01
KOG3914|consensus	390		98.99
KOG0882|consensus	558		98.96
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	98.95
KOG4532|consensus	344		98.93
KOG4190|consensus	1034		98.91
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	98.9
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	98.89
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	98.89
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	98.88
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	98.88
KOG3914|consensus	390		98.86
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	98.85
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	98.83
KOG4714|consensus	319		98.83
PRK02888	635	nitrous-oxide reductase; Validated	98.82
KOG4532|consensus	344		98.81
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	98.8
KOG1275|consensus	1118		98.77
KOG4714|consensus	319		98.77
KOG1645|consensus	463		98.77
KOG0309|consensus	1081		98.75
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	98.72
KOG1645|consensus	463		98.72
KOG2114|consensus	933		98.68
KOG0882|consensus	558		98.67
KOG2695|consensus	425		98.66
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	98.63
PRK02888	635	nitrous-oxide reductase; Validated	98.6
KOG1275|consensus	1118		98.59
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	98.58
KOG1832|consensus	1516		98.57
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	98.57
KOG3621|consensus	726		98.55
KOG2695|consensus	425		98.55
KOG1920|consensus	1265		98.53
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	98.52
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	98.51
KOG1832|consensus	1516		98.49
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	98.46
KOG3621|consensus	726		98.39
KOG3617|consensus	1416		98.39
KOG1920|consensus	1265		98.37
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	98.3
KOG2066|consensus	846		98.25
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	98.25
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	98.2
KOG1008|consensus	783		98.19
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	98.19
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	98.17
KOG3617|consensus	1416		98.16
KOG2066|consensus	846		98.12
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	98.09
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	98.07
KOG4649|consensus	354		98.06
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	98.06
KOG4649|consensus	354		98.05
KOG2114|consensus	933		98.05
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	98.05
KOG1008|consensus	783		98.04
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	98.03
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	98.0
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	97.95
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	97.93
COG3391	381	Uncharacterized conserved protein [Function unknow	97.9
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	97.89
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	97.85
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	97.82
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	97.8
KOG1897|consensus	1096		97.8
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	97.77
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	97.76
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	97.7
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	97.7
PRK13616	591	lipoprotein LpqB; Provisional	97.65
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	97.64
KOG1897|consensus	1096		97.61
KOG4640|consensus	665		97.59
KOG2395|consensus	644		97.57
KOG2444|consensus	238		97.55
PRK13616	591	lipoprotein LpqB; Provisional	97.54
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	97.53
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	97.53
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	97.5
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	97.49
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	97.43
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	97.41
KOG4640|consensus	665		97.38
PHA02713	557	hypothetical protein; Provisional	97.3
KOG2079|consensus	1206		97.2
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	97.2
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	97.16
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	97.09
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	97.05
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	97.05
KOG4441|consensus	571		96.98
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	96.88
COG5276	370	Uncharacterized conserved protein [Function unknow	96.88
COG3391	381	Uncharacterized conserved protein [Function unknow	96.85
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	96.79
KOG2377|consensus	657		96.73
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	96.66
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	96.63
KOG2079|consensus	1206		96.55
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	96.53
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	96.51
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	96.48
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	96.39
PHA02713	557	hypothetical protein; Provisional	96.38
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	96.35
PRK10115	686	protease 2; Provisional	96.34
KOG2395|consensus	644		96.32
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	96.32
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	96.29
KOG2444|consensus	238		96.28
KOG2280|consensus	829		96.06
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	96.01
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	96.0
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	95.96
KOG2280|consensus	829		95.94
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	95.92
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	95.85
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	95.85
COG5276	370	Uncharacterized conserved protein [Function unknow	95.64
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	95.62
PHA03098	534	kelch-like protein; Provisional	95.56
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	95.56
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	95.45
PF14781	136	BBS2_N: Ciliary BBSome complex subunit 2, N-termin	95.43
COG5167	776	VID27 Protein involved in vacuole import and degra	95.4
COG3823	262	Glutamine cyclotransferase [Posttranslational modi	95.36
KOG4441|consensus	571		95.31
KOG4499|consensus	310		95.29
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	94.92
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	94.87
PRK13684	334	Ycf48-like protein; Provisional	94.75
KOG1898|consensus	1205		94.6
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	94.54
PRK10115	686	protease 2; Provisional	94.08
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	93.99
KOG1916|consensus	1283		93.79
PHA03098	534	kelch-like protein; Provisional	93.71
COG3823	262	Glutamine cyclotransferase [Posttranslational modi	93.69
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	93.65
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	93.45
PHA02790	480	Kelch-like protein; Provisional	93.44
KOG4659|consensus	1899		93.43
KOG4499|consensus	310		93.36
PLN00033	398	photosystem II stability/assembly factor; Provisio	93.34
COG4590	733	ABC-type uncharacterized transport system, permeas	93.26
PF10433	504	MMS1_N: Mono-functional DNA-alkylating methyl meth	93.17
KOG1916|consensus	1283		93.06
PF07676	39	PD40: WD40-like Beta Propeller Repeat; InterPro: I	92.81
TIGR02276	42	beta_rpt_yvtn 40-residue YVTN family beta-propelle	92.72
TIGR03118	336	PEPCTERM_chp_1 conserved hypothetical protein TIGR	92.72
KOG4460|consensus	741		92.7
KOG3630|consensus	1405		92.67
KOG2377|consensus	657		92.55
KOG1900|consensus	1311		92.54
PF10433	504	MMS1_N: Mono-functional DNA-alkylating methyl meth	92.32
PF12657	173	TFIIIC_delta: Transcription factor IIIC subunit de	92.24
PF14727	418	PHTB1_N: PTHB1 N-terminus	92.06
PF07250	243	Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP	91.86
PHA02790	480	Kelch-like protein; Provisional	91.79
COG1520	370	FOG: WD40-like repeat [Function unknown]	91.77
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	91.62
PF07676	39	PD40: WD40-like Beta Propeller Repeat; InterPro: I	91.3
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	91.13
smart00036	302	CNH Domain found in NIK1-like kinases, mouse citro	90.96
COG5290	1243	IkappaB kinase complex, IKAP component [Transcript	90.82
PF08801	422	Nucleoporin_N: Nup133 N terminal like; InterPro: I	90.42
KOG2063|consensus	877		90.19
TIGR02276	42	beta_rpt_yvtn 40-residue YVTN family beta-propelle	90.13
KOG3630|consensus	1405		89.76
PF14781	136	BBS2_N: Ciliary BBSome complex subunit 2, N-termin	89.74
PF14727	418	PHTB1_N: PTHB1 N-terminus	89.58
COG5167	776	VID27 Protein involved in vacuole import and degra	89.11
PF11725	1774	AvrE: Pathogenicity factor; InterPro: IPR021085 Th	88.92
PF12657	173	TFIIIC_delta: Transcription factor IIIC subunit de	88.2
KOG4460|consensus	741		87.67
PLN00033	398	photosystem II stability/assembly factor; Provisio	87.41
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	87.19
KOG1900|consensus	1311		86.95
KOG2247|consensus	615		86.55
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	86.36
COG4590	733	ABC-type uncharacterized transport system, permeas	86.25
PF12768	281	Rax2: Cortical protein marker for cell polarity	86.23
KOG2247|consensus	615		85.64
KOG1898|consensus	1205		85.16
PF02333	381	Phytase: Phytase; InterPro: IPR003431 Phytase (3.1	84.76
KOG3616|consensus	1636		84.74
PF07250	243	Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP	84.69
TIGR03606	454	non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH	84.68
PF03088	89	Str_synth: Strictosidine synthase; InterPro: IPR01	83.71
PF12768	281	Rax2: Cortical protein marker for cell polarity	83.39
PF11715	547	Nup160: Nucleoporin Nup120/160; InterPro: IPR02171	82.91
PF10214	765	Rrn6: RNA polymerase I-specific transcription-init	82.23
PF13570	40	PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.	80.53
PF03022	287	MRJP: Major royal jelly protein; InterPro: IPR0035	80.4

>KOG0271|consensus

Probab=100.00  E-value=1.5e-55  Score=359.07  Aligned_cols=324  Identities=25%  Similarity=0.436  Sum_probs=279.8

Q ss_pred             eecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEE
Q psy14511         31 AITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRL  109 (488)
Q Consensus        31 ~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~v  109 (488)
                      .+.||.++|.|++|+|+|+.||+|+ |.++++||+.+   ..+.++.++|...|.|++|+|||+.|++.+.   ||+|++
T Consensus       110 S~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~T---eTp~~t~KgH~~WVlcvawsPDgk~iASG~~---dg~I~l  183 (480)
T KOG0271|consen  110 SIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDT---ETPLFTCKGHKNWVLCVAWSPDGKKIASGSK---DGSIRL  183 (480)
T ss_pred             ccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCC---CCcceeecCCccEEEEEEECCCcchhhcccc---CCeEEE
Confidence            4679999999999999999999998 99999999988   5677888999999999999999987666555   999999


Q ss_pred             EecCCCeeee-eeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCce
Q psy14511        110 WNSMNGKEKC-HVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPER  188 (488)
Q Consensus       110 wd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (488)
                      ||..+|+++. .+.+|...+..+++.|-.                                                   
T Consensus       184 wdpktg~~~g~~l~gH~K~It~Lawep~h---------------------------------------------------  212 (480)
T KOG0271|consen  184 WDPKTGQQIGRALRGHKKWITALAWEPLH---------------------------------------------------  212 (480)
T ss_pred             ecCCCCCcccccccCcccceeEEeecccc---------------------------------------------------
Confidence            9999987654 344554433333322211                                                   


Q ss_pred             eecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEE
Q psy14511        189 ILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDL  268 (488)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i  268 (488)
                                     +......+++++.||.++|||+..+.++..+..   |..+|+|+.|--+| +++++ +.|++|++
T Consensus       213 ---------------l~p~~r~las~skDg~vrIWd~~~~~~~~~lsg---HT~~VTCvrwGG~g-liySg-S~DrtIkv  272 (480)
T KOG0271|consen  213 ---------------LVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSG---HTASVTCVRWGGEG-LIYSG-SQDRTIKV  272 (480)
T ss_pred             ---------------cCCCccceecccCCCCEEEEEccCceEEEEecc---CccceEEEEEcCCc-eEEec-CCCceEEE
Confidence                           000113566777999999999999887665554   99999999997665 77777 99999999


Q ss_pred             EECCcceeeeeeccccccEEEEEec-------------CC-------------------------EEEEeecCCeEEEEE
Q psy14511        269 WHEQEERLIQKLRTHMHQVIAMCWN-------------GN-------------------------LLSCGTIGGNILHYD  310 (488)
Q Consensus       269 ~d~~~~~~~~~~~~~~~~v~~~~~~-------------~~-------------------------~l~~~~~dg~i~i~d  310 (488)
                      |+...+.+.+.+++|...|+.++.+             ++                         .+++|+.|.++.+|+
T Consensus       273 w~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~  352 (480)
T KOG0271|consen  273 WRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWN  352 (480)
T ss_pred             EEccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEec
Confidence            9999999999999999999888763             33                         499999999999999


Q ss_pred             CcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeee-----eecCCCCEEEEEccCCC
Q psy14511        311 VRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVP-----KLKREGRELVTSHGKQD  384 (488)
Q Consensus       311 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~g~~~  384 (488)
                      ....++++..+.+|..-|+.+.||||++++|+++ |..|++||.++++....++.++.     +|+.|.++|++  |+.|
T Consensus       353 p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRGHv~~VYqvawsaDsRLlVS--~SkD  430 (480)
T KOG0271|consen  353 PFKSKKPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASFRGHVAAVYQVAWSADSRLLVS--GSKD  430 (480)
T ss_pred             ccccccchhhhhchhhheeeEEECCCccEEEEeecccceeeeeCCCcchhhhhhhccceeEEEEeccCccEEEE--cCCC
Confidence            9888889999999999999999999999999999 89999999999988877775543     99999999999  8999


Q ss_pred             CeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEe
Q psy14511        385 CSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWN  433 (488)
Q Consensus       385 ~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~  433 (488)
                      .++++|++++.++...+.+|.+.|.++.|+|||+.+++|+.|..+++|.
T Consensus       431 sTLKvw~V~tkKl~~DLpGh~DEVf~vDwspDG~rV~sggkdkv~~lw~  479 (480)
T KOG0271|consen  431 STLKVWDVRTKKLKQDLPGHADEVFAVDWSPDGQRVASGGKDKVLRLWR  479 (480)
T ss_pred             ceEEEEEeeeeeecccCCCCCceEEEEEecCCCceeecCCCceEEEeec
Confidence            9999999999999999999999999999999999999999999999995

>KOG0271|consensus

Probab=100.00  E-value=2.2e-49  Score=323.17  Aligned_cols=311  Identities=20%  Similarity=0.307  Sum_probs=267.3

Q ss_pred             CCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEee
Q psy14511         71 RPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHG  150 (488)
Q Consensus        71 ~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (488)
                      ++-..+.||.++|.+++|+|+|+.|++.++   |.++++||+.+..+..+.++|..-+.++.++|++             
T Consensus       106 rCssS~~GH~e~Vl~~~fsp~g~~l~tGsG---D~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDg-------------  169 (480)
T KOG0271|consen  106 RCSSSIAGHGEAVLSVQFSPTGSRLVTGSG---DTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDG-------------  169 (480)
T ss_pred             eeccccCCCCCcEEEEEecCCCceEEecCC---CceEEeeccCCCCcceeecCCccEEEEEEECCCc-------------
Confidence            344567899999999999999988776666   9999999999999999999886655554444433             


Q ss_pred             eeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCce
Q psy14511        151 FEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKT  230 (488)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~  230 (488)
                                                                                ..+++++.||.|++||..+++.
T Consensus       170 ----------------------------------------------------------k~iASG~~dg~I~lwdpktg~~  191 (480)
T KOG0271|consen  170 ----------------------------------------------------------KKIASGSKDGSIRLWDPKTGQQ  191 (480)
T ss_pred             ----------------------------------------------------------chhhccccCCeEEEecCCCCCc
Confidence                                                                      5678888999999999999875


Q ss_pred             EEEEecCCCCCCceEEEEEcC-----CCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEec-CCEEEEeecCC
Q psy14511        231 QLLVEYPTYDNAYISCVAWKP-----RTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWN-GNLLSCGTIGG  304 (488)
Q Consensus       231 ~~~~~~~~~~~~~i~~~~~~~-----~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~dg  304 (488)
                      .- ..+.+ |...|++++|.|     ..++++++ +.||.++|||+..++++..+.+|..+|+|+.|. ..++++|+.|+
T Consensus       192 ~g-~~l~g-H~K~It~Lawep~hl~p~~r~las~-skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~gliySgS~Dr  268 (480)
T KOG0271|consen  192 IG-RALRG-HKKWITALAWEPLHLVPPCRRLASS-SKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGEGLIYSGSQDR  268 (480)
T ss_pred             cc-ccccC-cccceeEEeecccccCCCccceecc-cCCCCEEEEEccCceEEEEeccCccceEEEEEcCCceEEecCCCc
Confidence            43 34555 999999999976     56788888 999999999999999999999999999999995 68999999999


Q ss_pred             eEEEEECcCCCccceeeecCCccEEEEEEc-----------cCCc-------------------------EEEEEec-Ce
Q psy14511        305 NILHYDVRTHSDYPTAITREGDVVCGLKWS-----------PNGR-------------------------YLASGSN-NT  347 (488)
Q Consensus       305 ~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s-----------~~~~-------------------------~l~~~~d-~~  347 (488)
                      +|++|+...+ .+...+.+|...|+.++.+           |.++                         .|++|+| .+
T Consensus       269 tIkvw~a~dG-~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~t  347 (480)
T KOG0271|consen  269 TIKVWRALDG-KLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFT  347 (480)
T ss_pred             eEEEEEccch-hHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCce
Confidence            9999999885 6888999999999999877           3333                         4999996 99


Q ss_pred             EEEEECCCCCCC-cccc---eeee--eecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEE
Q psy14511        348 VKIWDFRQLDAK-RPLG---LIVP--KLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVA  421 (488)
Q Consensus       348 i~iwd~~~~~~~-~~~~---~~~~--~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~  421 (488)
                      +.+|+....... ..+.   ..++  .||||++++++  ++-|..|++||..+|+.+.+|++|-+.|+.++||.|.++|+
T Consensus       348 lflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IAS--aSFDkSVkLW~g~tGk~lasfRGHv~~VYqvawsaDsRLlV  425 (480)
T KOG0271|consen  348 LFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIAS--ASFDKSVKLWDGRTGKFLASFRGHVAAVYQVAWSADSRLLV  425 (480)
T ss_pred             EEEecccccccchhhhhchhhheeeEEECCCccEEEE--eecccceeeeeCCCcchhhhhhhccceeEEEEeccCccEEE
Confidence            999998654321 1111   1122  99999999999  79999999999999999999999999999999999999999


Q ss_pred             EEeCCCcEEEEecCCCCcc-ccccccCCcceEEeecCCCce
Q psy14511        422 AASADETISIWNCFPRDKK-RKARQVGSGSSLEFAILKQPV  461 (488)
Q Consensus       422 t~~~dg~v~iw~~~~~~~~-~~~~~~~~v~~~~~s~~~~~~  461 (488)
                      +||.|.++++|++.+.+.. .+++|..+|.++.|+|||+.+
T Consensus       426 S~SkDsTLKvw~V~tkKl~~DLpGh~DEVf~vDwspDG~rV  466 (480)
T KOG0271|consen  426 SGSKDSTLKVWDVRTKKLKQDLPGHADEVFAVDWSPDGQRV  466 (480)
T ss_pred             EcCCCceEEEEEeeeeeecccCCCCCceEEEEEecCCCcee
Confidence            9999999999999999887 578899999999999999998

>KOG0318|consensus

Probab=100.00  E-value=4.1e-45  Score=310.30  Aligned_cols=380  Identities=19%  Similarity=0.296  Sum_probs=316.3

Q ss_pred             CccCCceEEEeecCCeEEEEEcccCc-ccceeecccCceEEEEEEccCCcEEEEec---C--CeEEEEeccccCcCCCcc
Q psy14511          1 MCWNGNLLSCGTIGGNILHYDVRTHS-DYPTAITREGDVVCGLKWSPNGRYLASGS---N--NTVKIWDFRQLDAKRPQV   74 (488)
Q Consensus         1 ~~~dg~~la~g~~dg~i~iwd~~~~~-~~~~~~~~h~~~V~~l~~sp~g~~las~~---d--~~i~vwd~~~~~~~~~~~   74 (488)
                      ++++|.|+|+|...|.|+|||....+ .+...++.-.++|..++|++|++.|++.+   +  |.+.+||.-+     .+.
T Consensus        67 ySPsG~yiASGD~sG~vRIWdtt~~~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGEGrerfg~~F~~DSG~-----SvG  141 (603)
T KOG0318|consen   67 YSPSGFYIASGDVSGKVRIWDTTQKEHILKNEFQVLAGPIKDISWDFDSKRIAAVGEGRERFGHVFLWDSGN-----SVG  141 (603)
T ss_pred             eCCCceEEeecCCcCcEEEEeccCcceeeeeeeeecccccccceeCCCCcEEEEEecCccceeEEEEecCCC-----ccc
Confidence            35689999999999999999988744 33445667788999999999999888776   2  5777888643     455


Q ss_pred             cccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeecc
Q psy14511         75 NNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEID  154 (488)
Q Consensus        75 ~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (488)
                      ++.+|...|+++.|-|..++-++++++  |+++.+|+=...+....+..|+.-++++.++|+                  
T Consensus       142 ei~GhSr~ins~~~KpsRPfRi~T~sd--Dn~v~ffeGPPFKFk~s~r~HskFV~~VRysPD------------------  201 (603)
T KOG0318|consen  142 EITGHSRRINSVDFKPSRPFRIATGSD--DNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPD------------------  201 (603)
T ss_pred             eeeccceeEeeeeccCCCceEEEeccC--CCeEEEeeCCCeeeeecccccccceeeEEECCC------------------
Confidence            688999999999999999998888886  999999986666665666666554544444443                  


Q ss_pred             ccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEE
Q psy14511        155 RKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLV  234 (488)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~  234 (488)
                                                                           +..+++++.||++.+||-.+++....+
T Consensus       202 -----------------------------------------------------G~~Fat~gsDgki~iyDGktge~vg~l  228 (603)
T KOG0318|consen  202 -----------------------------------------------------GSRFATAGSDGKIYIYDGKTGEKVGEL  228 (603)
T ss_pred             -----------------------------------------------------CCeEEEecCCccEEEEcCCCccEEEEe
Confidence                                                                 267888999999999999999998888


Q ss_pred             ecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecccc---ccEEEEEecCCEEEEeecCCeEEEEEC
Q psy14511        235 EYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHM---HQVIAMCWNGNLLSCGTIGGNILHYDV  311 (488)
Q Consensus       235 ~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~---~~v~~~~~~~~~l~~~~~dg~i~i~d~  311 (488)
                      .-..+|.+.|.+++|+||+..+++. +.|.+++|||+.+.++++++....   ..-..+-|.+..|++.+.+|.|.+++.
T Consensus       229 ~~~~aHkGsIfalsWsPDs~~~~T~-SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~  307 (603)
T KOG0318|consen  229 EDSDAHKGSIFALSWSPDSTQFLTV-SADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNP  307 (603)
T ss_pred             cCCCCccccEEEEEECCCCceEEEe-cCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecc
Confidence            7555599999999999999999999 999999999999999988885432   233455567889999999999999999


Q ss_pred             cCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccce--------e-----------------
Q psy14511        312 RTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGL--------I-----------------  365 (488)
Q Consensus       312 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~--------~-----------------  365 (488)
                      .... +...+.+|+..|++++.+|++++|.+++ ||.|.-|+..++...+....        +                 
T Consensus       308 ~d~~-~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l  386 (603)
T KOG0318|consen  308 SDPS-VLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTL  386 (603)
T ss_pred             cCCC-hhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCeE
Confidence            9876 8899999999999999999999999999 79999999987654322100        0                 


Q ss_pred             -------------------------------------------------------------eeeecCCCCEEEEEccCCC
Q psy14511        366 -------------------------------------------------------------VPKLKREGRELVTSHGKQD  384 (488)
Q Consensus       366 -------------------------------------------------------------~~~~~~~~~~l~~~~g~~~  384 (488)
                                                                                   ..+++|++..+++  |+.|
T Consensus       387 ~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaV--GG~D  464 (603)
T KOG0318|consen  387 RVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSEVAV--GGQD  464 (603)
T ss_pred             EEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcCCCCEEEE--eccc
Confidence                                                                         1188999999999  9999


Q ss_pred             CeEEEEeCCCcc--eeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcc--ccccccCCcceEEeecCCCc
Q psy14511        385 CSLKMWEYPRLH--LIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKK--RKARQVGSGSSLEFAILKQP  460 (488)
Q Consensus       385 ~~i~i~d~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~--~~~~~~~~v~~~~~s~~~~~  460 (488)
                      +.|++|.+..++  ....+..|.++|++++||||+.+||++...+.+.+||+++++..  ...-|..+|.+++|+|+.+.
T Consensus       465 gkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~~~~~w~FHtakI~~~aWsP~n~~  544 (603)
T KOG0318|consen  465 GKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREVKTNRWAFHTAKINCVAWSPNNKL  544 (603)
T ss_pred             ceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEEEeccCCcEEEEEcccCceecceeeeeeeeEEEEEeCCCceE
Confidence            999999998755  33456779999999999999999999999999999999999875  34569999999999999887


Q ss_pred             eE
Q psy14511        461 VS  462 (488)
Q Consensus       461 ~~  462 (488)
                      ++
T Consensus       545 vA  546 (603)
T KOG0318|consen  545 VA  546 (603)
T ss_pred             EE
Confidence            73

>KOG0291|consensus

Probab=100.00  E-value=2.2e-44  Score=318.67  Aligned_cols=426  Identities=16%  Similarity=0.233  Sum_probs=324.4

Q ss_pred             CccCCceEEEeecCCeEEEEEcccCcc-------cceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCC
Q psy14511          1 MCWNGNLLSCGTIGGNILHYDVRTHSD-------YPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRP   72 (488)
Q Consensus         1 ~~~dg~~la~g~~dg~i~iwd~~~~~~-------~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~   72 (488)
                      +++||+++|+|. .+.+.||.......       +.+++.+|-..|.++.|+.|.++|++|+ |..+++|+++..+. ..
T Consensus       104 fSPng~~fav~~-gn~lqiw~~P~~~~~~~~pFvl~r~~~g~fddi~si~Ws~DSr~l~~gsrD~s~rl~~v~~~k~-~~  181 (893)
T KOG0291|consen  104 FSPNGKFFAVGC-GNLLQIWHAPGEIKNEFNPFVLHRTYLGHFDDITSIDWSDDSRLLVTGSRDLSARLFGVDGNKN-LF  181 (893)
T ss_pred             ECCCCcEEEEEe-cceeEEEecCcchhcccCcceEeeeecCCccceeEEEeccCCceEEeccccceEEEEEeccccc-cc
Confidence            356999999876 67899998765332       3345679999999999999999999999 99999999987554 33


Q ss_pred             cccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccc--cccccccccccceeEEEEEee
Q psy14511         73 QVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQAN--DETISYREQKKRRHLSFLLHG  150 (488)
Q Consensus        73 ~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  150 (488)
                      ...+.+|...|.+.-|..+...+++.+.   ||.+.+|..... +...-........  .....-+.........+..  
T Consensus       182 ~~~l~gHkd~VvacfF~~~~~~l~tvsk---dG~l~~W~~~~~-P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k--  255 (893)
T KOG0291|consen  182 TYALNGHKDYVVACFFGANSLDLYTVSK---DGALFVWTCDLR-PPELDKAEKDEEGSDDEEMDEDGEEKTHKIFWYK--  255 (893)
T ss_pred             eEeccCCCcceEEEEeccCcceEEEEec---CceEEEEEecCC-CcccccccccccccccccccccchhhhcceEEEE--
Confidence            4457899999999999999988888887   999999987532 1100000000000  0000000000000000000  


Q ss_pred             eeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCC-CcEE-EEECCCeEEEEECCCC
Q psy14511        151 FEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGY-HDTL-AVALDTSVYTWNTKTN  228 (488)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~d~~v~iw~~~~~  228 (488)
                         .....+.                                   .+...+.+..++. ..++ ++-..|...+|++..-
T Consensus       256 ---~~k~~ln-----------------------------------~~~~kvtaa~fH~~t~~lvvgFssG~f~LyelP~f  297 (893)
T KOG0291|consen  256 ---TKKHYLN-----------------------------------QNSSKVTAAAFHKGTNLLVVGFSSGEFGLYELPDF  297 (893)
T ss_pred             ---EEeeeec-----------------------------------ccccceeeeeccCCceEEEEEecCCeeEEEecCCc
Confidence               0000000                                   0001223334433 2344 4448888999999999


Q ss_pred             ceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeE
Q psy14511        229 KTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNI  306 (488)
Q Consensus       229 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i  306 (488)
                      ..+..+.+   ...+|..++|+..|.+++.+++.-|.+.+|+.++...+...++|...+.++++  ||+++++|++||.|
T Consensus       298 ~lih~LSi---s~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKV  374 (893)
T KOG0291|consen  298 NLIHSLSI---SDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKV  374 (893)
T ss_pred             eEEEEeec---ccceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeeccccccceeeEEECCCCcEEEeccCCCcE
Confidence            98888887   66889999999999999999788899999999999999999999999999999  89999999999999


Q ss_pred             EEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCccccee------eeeecCCCCEEEEE
Q psy14511        307 LHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLI------VPKLKREGRELVTS  379 (488)
Q Consensus       307 ~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~------~~~~~~~~~~l~~~  379 (488)
                      ++||...+ -+..++..|.+.|+.+.|+..|+.+++.+ ||+|+.||+.....-+.+...      ..+..|.|..+.+ 
T Consensus       375 KvWn~~Sg-fC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~A-  452 (893)
T KOG0291|consen  375 KVWNTQSG-FCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCA-  452 (893)
T ss_pred             EEEeccCc-eEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEe-
Confidence            99999986 58889999999999999999999999999 999999999877544433322      2266777888888 


Q ss_pred             ccCCC-CeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcc-ccccccCCcceEEeecC
Q psy14511        380 HGKQD-CSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKK-RKARQVGSGSSLEFAIL  457 (488)
Q Consensus       380 ~g~~~-~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~-~~~~~~~~v~~~~~s~~  457 (488)
                       |..| -.|++|++++|+++..+.||.++|.+++|+|++..||++|.|.+|++||+-..... ........+..+.|+|+
T Consensus       453 -G~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~vEtl~i~sdvl~vsfrPd  531 (893)
T KOG0291|consen  453 -GAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGTVETLEIRSDVLAVSFRPD  531 (893)
T ss_pred             -eccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeeccCceeeeEeeccceeEEEEcCC
Confidence             5555 57999999999999999999999999999999999999999999999999876443 56778888999999999


Q ss_pred             CCceEEEEeeecccccceeeEEEEeecc
Q psy14511        458 KQPVSLTALLRSRAVEKQQHAIAYTVFG  485 (488)
Q Consensus       458 ~~~~~~~~~~~~~~~~~~~~~i~~~~~g  485 (488)
                      |+.++       .++-+.++.++..+.+
T Consensus       532 G~ela-------VaTldgqItf~d~~~~  552 (893)
T KOG0291|consen  532 GKELA-------VATLDGQITFFDIKEA  552 (893)
T ss_pred             CCeEE-------EEEecceEEEEEhhhc
Confidence            99994       4445666666666554

>KOG0319|consensus

Probab=100.00  E-value=1e-44  Score=320.04  Aligned_cols=440  Identities=18%  Similarity=0.258  Sum_probs=330.3

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCc--EEEEec-CCeEEEEeccccCcCCCcccccccc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGR--YLASGS-NNTVKIWDFRQLDAKRPQVNNQCHL   80 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~--~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~   80 (488)
                      .|.+||+|+.||.++|||+..+.+. +.+.||.+.|.++.|.|+-+  +|++|. |+++++||+.+...  ++..+..|.
T Consensus       116 ~g~LlAtggaD~~v~VWdi~~~~~t-h~fkG~gGvVssl~F~~~~~~~lL~sg~~D~~v~vwnl~~~~t--cl~~~~~H~  192 (775)
T KOG0319|consen  116 TGTLLATGGADGRVKVWDIKNGYCT-HSFKGHGGVVSSLLFHPHWNRWLLASGATDGTVRVWNLNDKRT--CLHTMILHK  192 (775)
T ss_pred             CCceEEeccccceEEEEEeeCCEEE-EEecCCCceEEEEEeCCccchhheeecCCCceEEEEEcccCch--HHHHHHhhh
Confidence            5789999999999999999998865 67999999999999999765  477887 99999999986432  577788999


Q ss_pred             cceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceec
Q psy14511         81 SAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLN  160 (488)
Q Consensus        81 ~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (488)
                      +.|++++|++|+..+++.|.   |..+.+||+.+-+..........-..... ........             ...++.
T Consensus       193 S~vtsL~~~~d~~~~ls~~R---Dkvi~vwd~~~~~~l~~lp~ye~~E~vv~-l~~~~~~~-------------~~~~~T  255 (775)
T KOG0319|consen  193 SAVTSLAFSEDSLELLSVGR---DKVIIVWDLVQYKKLKTLPLYESLESVVR-LREELGGK-------------GEYIIT  255 (775)
T ss_pred             hheeeeeeccCCceEEEecc---CcEEEEeehhhhhhhheechhhheeeEEE-echhcCCc-------------ceEEEE
Confidence            99999999999999999997   99999999976666555543322111111 11100000             000011


Q ss_pred             cccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCC
Q psy14511        161 QSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYD  240 (488)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~  240 (488)
                      ..+.... ...............        .+. ...+.-.....+.+++++.+.|..+.++|.++.+....+.  | .
T Consensus       256 aG~~g~~-~~~d~es~~~~~~~~--------~~~-~~e~~~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~iv--G-~  322 (775)
T KOG0319|consen  256 AGGSGVV-QYWDSESGKCVYKQR--------QSD-SEEIDHLLAIESMSQLLLVTAEQNLFLYDEDELTIVKQIV--G-Y  322 (775)
T ss_pred             ecCCceE-EEEecccchhhhhhc--------cCC-chhhhcceeccccCceEEEEccceEEEEEccccEEehhhc--C-C
Confidence            1110000 000000000000000        000 0111112233345789999999999999988877655443  3 6


Q ss_pred             CCceEEEEE-cCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEE-e-cCCEEEEeecCCeEEEEECcCCC--
Q psy14511        241 NAYISCVAW-KPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMC-W-NGNLLSCGTIGGNILHYDVRTHS--  315 (488)
Q Consensus       241 ~~~i~~~~~-~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~-~-~~~~l~~~~~dg~i~i~d~~~~~--  315 (488)
                      ...|..++| .|+.++++++ +..+.+++|+..+..+. .+.+|...|.++. + +|.+|++|+.|.++++|.++++.  
T Consensus       323 ndEI~Dm~~lG~e~~~laVA-TNs~~lr~y~~~~~~c~-ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~~  400 (775)
T KOG0319|consen  323 NDEILDMKFLGPEESHLAVA-TNSPELRLYTLPTSYCQ-IIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCSK  400 (775)
T ss_pred             chhheeeeecCCccceEEEE-eCCCceEEEecCCCceE-EEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCcch
Confidence            678888886 5677899999 99999999998886665 8899999999999 4 67799999999999999885432  


Q ss_pred             -ccceeeecCCccEEEEEEccCC-cEEEEEe-cCeEEEEECCCCCCCccccee------------ee--eecCCCCEEEE
Q psy14511        316 -DYPTAITREGDVVCGLKWSPNG-RYLASGS-NNTVKIWDFRQLDAKRPLGLI------------VP--KLKREGRELVT  378 (488)
Q Consensus       316 -~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~-d~~i~iwd~~~~~~~~~~~~~------------~~--~~~~~~~~l~~  378 (488)
                       .+.....+|...|.+++++..+ .+|++++ |.++++|++...+.......+            ++  +++|+.+.+++
T Consensus       401 ~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT  480 (775)
T KOG0319|consen  401 SLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIAT  480 (775)
T ss_pred             hhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEe
Confidence             3556678999999999997765 6888888 799999999873322221111            12  88999999999


Q ss_pred             EccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcccc-ccccCCcceEEeecC
Q psy14511        379 SHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRK-ARQVGSGSSLEFAIL  457 (488)
Q Consensus       379 ~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~-~~~~~~v~~~~~s~~  457 (488)
                        |+.|.+.+||+++.++.+.++.+|...|+++.|+|..+.|||+|.|++|+||.+.+...++. .+|...|.-..|-.+
T Consensus       481 --~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~~  558 (775)
T KOG0319|consen  481 --GSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIRN  558 (775)
T ss_pred             --cccccceeeecccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCccceeEeeeeeeC
Confidence              89999999999999999999999999999999999999999999999999999999999854 569999999999998


Q ss_pred             CCceEEEEeeecccccceeeEEEEeecccc
Q psy14511        458 KQPVSLTALLRSRAVEKQQHAIAYTVFGEA  487 (488)
Q Consensus       458 ~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~  487 (488)
                      ++.+       .++..++.+.+|...++++
T Consensus       559 ~~ql-------iS~~adGliKlWnikt~eC  581 (775)
T KOG0319|consen  559 GKQL-------ISAGADGLIKLWNIKTNEC  581 (775)
T ss_pred             CcEE-------EeccCCCcEEEEeccchhh
Confidence            8887       4566778888888887775

>KOG0272|consensus

Probab=100.00  E-value=1.7e-46  Score=310.16  Aligned_cols=274  Identities=26%  Similarity=0.406  Sum_probs=243.2

Q ss_pred             ccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecC--CCeEEeeeCCcccceEEEE
Q psy14511         34 REGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPW--EPTLLATGGGICDQTVRLW  110 (488)
Q Consensus        34 ~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~l~~~~~~~~d~~i~vw  110 (488)
                      +...+|..+.||+|++.||+|+ +|.++||+..+.   ..+.++.+|++.|.++.|+|.  +..+++++.   ||++++|
T Consensus       173 gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~---~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~---Dgtvklw  246 (459)
T KOG0272|consen  173 GDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQC---NLLQTLRGHTSRVGAAVFHPVDSDLNLATASA---DGTVKLW  246 (459)
T ss_pred             cCCCcceeeEeecCCCeEEEeecCCceeEeecCCc---ceeEEEeccccceeeEEEccCCCccceeeecc---CCceeee
Confidence            5677999999999999999999 999999999874   566778999999999999998  334555444   9999999


Q ss_pred             ecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceee
Q psy14511        111 NSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERIL  190 (488)
Q Consensus       111 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (488)
                      ++++..++..+                                                                     
T Consensus       247 ~~~~e~~l~~l---------------------------------------------------------------------  257 (459)
T KOG0272|consen  247 KLSQETPLQDL---------------------------------------------------------------------  257 (459)
T ss_pred             ccCCCcchhhh---------------------------------------------------------------------
Confidence            98765543332                                                                     


Q ss_pred             cCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEE
Q psy14511        191 EAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWH  270 (488)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d  270 (488)
                                                                    .+ |...|..++|+|+|++|+++ +.|.+-++||
T Consensus       258 ----------------------------------------------~g-H~~RVs~VafHPsG~~L~Ta-sfD~tWRlWD  289 (459)
T KOG0272|consen  258 ----------------------------------------------EG-HLARVSRVAFHPSGKFLGTA-SFDSTWRLWD  289 (459)
T ss_pred             ----------------------------------------------hc-chhhheeeeecCCCceeeec-ccccchhhcc
Confidence                                                          22 77789999999999999999 9999999999


Q ss_pred             CCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCe
Q psy14511        271 EQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNT  347 (488)
Q Consensus       271 ~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~  347 (488)
                      +.++..+...++|...|.+++|  ||.++++|+.|..-+|||++++ .++..+.+|..+|.+++|+|+|..||+|+ |++
T Consensus       290 ~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtg-r~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt  368 (459)
T KOG0272|consen  290 LETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTG-RCIMFLAGHIKEILSVAFSPNGYHLATGSSDNT  368 (459)
T ss_pred             cccchhhHhhcccccccceeEecCCCceeeccCccchhheeecccC-cEEEEecccccceeeEeECCCceEEeecCCCCc
Confidence            9999999999999999999999  8999999999999999999997 47888999999999999999999999999 799


Q ss_pred             EEEEECCCCCCCcccceeee-----eecC-CCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEE
Q psy14511        348 VKIWDFRQLDAKRPLGLIVP-----KLKR-EGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVA  421 (488)
Q Consensus       348 i~iwd~~~~~~~~~~~~~~~-----~~~~-~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~  421 (488)
                      ++|||++.......+....+     .|+| .|.+|++  ++.|++++||...++.+++.+.||.+.|.++.++||+.+++
T Consensus       369 ~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~T--asyD~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d~~~i~  446 (459)
T KOG0272|consen  369 CKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLVT--ASYDNTVKIWSTRTWSPLKSLAGHEGKVISLDISPDSQAIA  446 (459)
T ss_pred             EEEeeecccccceecccccchhhheEecccCCeEEEE--cccCcceeeecCCCcccchhhcCCccceEEEEeccCCceEE
Confidence            99999998765444444332     8998 6777777  78999999999999999999999999999999999999999


Q ss_pred             EEeCCCcEEEEe
Q psy14511        422 AASADETISIWN  433 (488)
Q Consensus       422 t~~~dg~v~iw~  433 (488)
                      |++.|.++++|.
T Consensus       447 t~s~DRT~KLW~  458 (459)
T KOG0272|consen  447 TSSFDRTIKLWR  458 (459)
T ss_pred             EeccCceeeecc
Confidence            999999999995

>KOG0318|consensus

Probab=100.00  E-value=3.8e-43  Score=298.35  Aligned_cols=390  Identities=14%  Similarity=0.238  Sum_probs=308.2

Q ss_pred             ceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCccccccccccee
Q psy14511          6 NLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVK   84 (488)
Q Consensus         6 ~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~   84 (488)
                      -.+++|+.|++|.+|+-.-.+ ....+..|..-|.|+.|+|||.++|+++ |+.|.+||=.+++....+..-.+|.+.|.
T Consensus       161 fRi~T~sdDn~v~ffeGPPFK-Fk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIf  239 (603)
T KOG0318|consen  161 FRIATGSDDNTVAFFEGPPFK-FKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIF  239 (603)
T ss_pred             eEEEeccCCCeEEEeeCCCee-eeecccccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEE
Confidence            368999999999999865444 3355678999999999999999999998 99999999888775555554558999999


Q ss_pred             EEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccc
Q psy14511         85 AIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKR  164 (488)
Q Consensus        85 ~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (488)
                      +++|+||+..+++++.   |.+++|||+.+.++++++..... +.                                   
T Consensus       240 alsWsPDs~~~~T~Sa---Dkt~KIWdVs~~slv~t~~~~~~-v~-----------------------------------  280 (603)
T KOG0318|consen  240 ALSWSPDSTQFLTVSA---DKTIKIWDVSTNSLVSTWPMGST-VE-----------------------------------  280 (603)
T ss_pred             EEEECCCCceEEEecC---CceEEEEEeeccceEEEeecCCc-hh-----------------------------------
Confidence            9999999999998887   99999999999988877765522 00                                   


Q ss_pred             cccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCce
Q psy14511        165 TVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYI  244 (488)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i  244 (488)
                                                        .....+-|..+.+++.+.+|.|.+++........++.  + |...|
T Consensus       281 ----------------------------------dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~--G-HnK~I  323 (603)
T KOG0318|consen  281 ----------------------------------DQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVIS--G-HNKSI  323 (603)
T ss_pred             ----------------------------------ceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheec--c-cccce
Confidence                                              0112355667899999999999999999988555444  4 99999


Q ss_pred             EEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeee-ccccccEEEEEecC-CEEEEeecCCeEEEEECcCCC-------
Q psy14511        245 SCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKL-RTHMHQVIAMCWNG-NLLSCGTIGGNILHYDVRTHS-------  315 (488)
Q Consensus       245 ~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~-~~~~~~v~~~~~~~-~~l~~~~~dg~i~i~d~~~~~-------  315 (488)
                      +++..+|++++|+++ +.||.|.-|+..++..-+.. +.|...|.+++... ..+++.+.|.++++.++....       
T Consensus       324 TaLtv~~d~~~i~Sg-syDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~  402 (603)
T KOG0318|consen  324 TALTVSPDGKTIYSG-SYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVV  402 (603)
T ss_pred             eEEEEcCCCCEEEee-ccCceEEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCeEEEEecccCccccccee
Confidence            999999999999999 99999999999987665554 67999999999854 888999999999999764321       


Q ss_pred             ----ccc-------------------eeeecCC--------ccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccc
Q psy14511        316 ----DYP-------------------TAITREG--------DVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLG  363 (488)
Q Consensus       316 ----~~~-------------------~~~~~~~--------~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~  363 (488)
                          ++.                   ..+..+.        -...+++++|+++.+|.|+ |+.++||.+...+......
T Consensus       403 ~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~  482 (603)
T KOG0318|consen  403 KLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSEVAVGGQDGKVHVYSLSGDELKEEAK  482 (603)
T ss_pred             ecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcCCCCEEEEecccceEEEEEecCCcccceee
Confidence                000                   0111111        1245789999999999999 6999999998765432211


Q ss_pred             ee-------eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeE-EEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecC
Q psy14511        364 LI-------VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIE-ELKIHQERILSAVLSPDQTCVAAASADETISIWNCF  435 (488)
Q Consensus       364 ~~-------~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~-~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~  435 (488)
                      ..       ..++|||+.+|++  +...+.+.+||+.+.+... ...-|...|.+++|+|+..++||||.|-.|.||++.
T Consensus       483 ~~~h~a~iT~vaySpd~~yla~--~Da~rkvv~yd~~s~~~~~~~w~FHtakI~~~aWsP~n~~vATGSlDt~Viiysv~  560 (603)
T KOG0318|consen  483 LLEHRAAITDVAYSPDGAYLAA--GDASRKVVLYDVASREVKTNRWAFHTAKINCVAWSPNNKLVATGSLDTNVIIYSVK  560 (603)
T ss_pred             eecccCCceEEEECCCCcEEEE--eccCCcEEEEEcccCceecceeeeeeeeEEEEEeCCCceEEEeccccceEEEEEcc
Confidence            11       2299999999999  7899999999999887643 344599999999999999999999999999999999


Q ss_pred             CCCcc--ccccccCCcceEEeecCCCceEEEEeeecccccceeeEEEEee
Q psy14511        436 PRDKK--RKARQVGSGSSLEFAILKQPVSLTALLRSRAVEKQQHAIAYTV  483 (488)
Q Consensus       436 ~~~~~--~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~~  483 (488)
                      .+...  ..-.|...|..+.|--+...+        +..+|.-+.+|.++
T Consensus       561 kP~~~i~iknAH~~gVn~v~wlde~tvv--------SsG~Da~iK~W~v~  602 (603)
T KOG0318|consen  561 KPAKHIIIKNAHLGGVNSVAWLDESTVV--------SSGQDANIKVWNVT  602 (603)
T ss_pred             ChhhheEeccccccCceeEEEecCceEE--------eccCcceeEEeccc
Confidence            87665  345677779999997644333        34466666666553

>KOG0306|consensus

Probab=100.00  E-value=3.6e-43  Score=310.81  Aligned_cols=456  Identities=15%  Similarity=0.188  Sum_probs=337.0

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSA   82 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~   82 (488)
                      |.-+||+|..||.|+||+..+.. +.-.+.+|..+|+++.|+..|..||+|+ |+.|.|||+-.   ..-...+.||...
T Consensus        76 d~l~lAVGYaDGsVqif~~~s~~-~~~tfngHK~AVt~l~fd~~G~rlaSGskDt~IIvwDlV~---E~Gl~rL~GHkd~  151 (888)
T KOG0306|consen   76 DILLLAVGYADGSVQIFSLESEE-ILITFNGHKAAVTTLKFDKIGTRLASGSKDTDIIVWDLVG---EEGLFRLRGHKDS  151 (888)
T ss_pred             CcceEEEEecCceEEeeccCCCc-eeeeecccccceEEEEEcccCceEeecCCCccEEEEEecc---ceeeEEeecchHH
Confidence            56678999999999999999875 5567899999999999999999999999 99999999975   3345568999999


Q ss_pred             eeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCcccccccccc------ccccc---------------
Q psy14511         83 VKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYR------EQKKR---------------  141 (488)
Q Consensus        83 v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~---------------  141 (488)
                      |+..-|..+.+.+++++.   |+.|++||+++..+..+...+...+..+.+...      .....               
T Consensus       152 iT~~~F~~~~~~lvS~sK---Ds~iK~WdL~tqhCf~Thvd~r~Eiw~l~~~~~~lvt~~~dse~~v~~L~~~~D~~~~~  228 (888)
T KOG0306|consen  152 ITQALFLNGDSFLVSVSK---DSMIKFWDLETQHCFETHVDHRGEIWALVLDEKLLVTAGTDSELKVWELAFEDDEKETN  228 (888)
T ss_pred             HhHHhccCCCeEEEEecc---CceEEEEecccceeeeEEecccceEEEEEEecceEEEEecCCceEEEEeeccccccccc
Confidence            999999987777777776   999999999999998888777555554443330      00111               


Q ss_pred             eeEEEEEeeeec-------------cccceecccccc------------------------ccceee--------ecccc
Q psy14511        142 RHLSFLLHGFEI-------------DRKKVLNQSKRT------------------------VSPTQF--------LRTLG  176 (488)
Q Consensus       142 ~~~~~~~~~~~~-------------~~~~~~~~~~~~------------------------~~~~~~--------~~~~~  176 (488)
                      ...++...|.-.             .+.+++...+..                        ......        ...+.
T Consensus       229 ~~~s~~~~G~~~rqsk~R~i~l~~d~s~r~~~c~g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka~t~e~~~~v~~sl~  308 (888)
T KOG0306|consen  229 RYISTKLRGTFIRQSKGREINLVTDFSDRFLVCQGADKVIELFRIRSKEEIAKILSKKLKRAKKKAETEENEDDVEKSLS  308 (888)
T ss_pred             ccceeeccceeeeccCCceeEEeecCcccEEEEecchhhhhheeecCHHHHHHHHHHHHHHhhhhccccccccchhhhHH
Confidence            111111111000             001111111000                        000000        00000


Q ss_pred             ---------------cccccccCCC----------------------------ceeecCCCccccceeeeeeeCCCcEEE
Q psy14511        177 ---------------KLPRKVKAKP----------------------------ERILEAPSIINDFYTSGLDWGYHDTLA  213 (488)
Q Consensus       177 ---------------~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (488)
                                     +.....+...                            .++....-..+...+.+++++.+.++.
T Consensus       309 ~~i~r~~~ir~~~kiks~dv~~~~~~~~~lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRsl~vS~d~~~~  388 (888)
T KOG0306|consen  309 DEIKRLETIRTSAKIKSFDVTPSGGTENTLVLLANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVRSLCVSSDSILL  388 (888)
T ss_pred             HHHHHHHheechhheeEEEEEecCCcceeEEEeecCceEEEEeccCCCCCccccccceeeeccchhheeEEEeecCceee
Confidence                           0000000000                            000000011122345667777766665


Q ss_pred             EE-CCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe
Q psy14511        214 VA-LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW  292 (488)
Q Consensus       214 ~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~  292 (488)
                      ++ ..+.+.+|+..+.+++..+.     ...+.+..|-|.++++++| ...|.+.+||+.....+.++++|.+.+..++.
T Consensus       389 ~Sga~~SikiWn~~t~kciRTi~-----~~y~l~~~Fvpgd~~Iv~G-~k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~  462 (888)
T KOG0306|consen  389 ASGAGESIKIWNRDTLKCIRTIT-----CGYILASKFVPGDRYIVLG-TKNGELQVFDLASASLVETIRAHDGAIWSISL  462 (888)
T ss_pred             eecCCCcEEEEEccCcceeEEec-----cccEEEEEecCCCceEEEe-ccCCceEEEEeehhhhhhhhhccccceeeeee
Confidence            55 78999999999999988875     3489999999999999999 99999999999999999999999999999988


Q ss_pred             --cCCEEEEeecCCeEEEEECcCCC----ccce-------eeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCC
Q psy14511        293 --NGNLLSCGTIGGNILHYDVRTHS----DYPT-------AITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDA  358 (488)
Q Consensus       293 --~~~~l~~~~~dg~i~i~d~~~~~----~~~~-------~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~  358 (488)
                        |+..+++|+.|.+|++||..-..    ...+       ....-.+.|.++.+||||++||++- |++++||-+++.+.
T Consensus       463 ~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtlKF  542 (888)
T KOG0306|consen  463 SPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLKF  542 (888)
T ss_pred             cCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCcEEEEEeccCeEEEEEecceee
Confidence              89999999999999999974211    1111       1222346799999999999999998 89999999988754


Q ss_pred             C-----cccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEe
Q psy14511        359 K-----RPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWN  433 (488)
Q Consensus       359 ~-----~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~  433 (488)
                      .     ..++......|||++.+++  |+.|.+|++|-+.=|.+...+.+|.+.|.++.|-|+...+.|+|.|+.|+-||
T Consensus       543 flsLYGHkLPV~smDIS~DSklivT--gSADKnVKiWGLdFGDCHKS~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWD  620 (888)
T KOG0306|consen  543 FLSLYGHKLPVLSMDISPDSKLIVT--GSADKNVKIWGLDFGDCHKSFFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWD  620 (888)
T ss_pred             eeeecccccceeEEeccCCcCeEEe--ccCCCceEEeccccchhhhhhhcccCceeEEEEcccceeEEEecCcceEEeec
Confidence            3     2334444589999999999  89999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCcc-ccccccCCcceEEeecCCCceEEEEeeecccccceeeEEEE
Q psy14511        434 CFPRDKK-RKARQVGSGSSLEFAILKQPVSLTALLRSRAVEKQQHAIAY  481 (488)
Q Consensus       434 ~~~~~~~-~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~  481 (488)
                      -..-+.. .+.+|...|.+++.+|+|..+       .+++.|..+.+|.
T Consensus       621 g~kFe~iq~L~~H~~ev~cLav~~~G~~v-------vs~shD~sIRlwE  662 (888)
T KOG0306|consen  621 GEKFEEIQKLDGHHSEVWCLAVSPNGSFV-------VSSSHDKSIRLWE  662 (888)
T ss_pred             hhhhhhheeeccchheeeeeEEcCCCCeE-------EeccCCceeEeee
Confidence            8887776 678899999999999999877       4455555555554

>KOG0286|consensus

Probab=100.00  E-value=5.3e-43  Score=276.02  Aligned_cols=283  Identities=19%  Similarity=0.334  Sum_probs=243.1

Q ss_pred             eeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEE
Q psy14511         30 TAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVR  108 (488)
Q Consensus        30 ~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~  108 (488)
                      ++|++|.+.|.++.|++|+++|++++ ||.+.|||.-+...   ...+.-....|..++|+|.|++++..|-   |+...
T Consensus        49 r~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK---~haipl~s~WVMtCA~sPSg~~VAcGGL---dN~Cs  122 (343)
T KOG0286|consen   49 RTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNK---VHAIPLPSSWVMTCAYSPSGNFVACGGL---DNKCS  122 (343)
T ss_pred             EEecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccc---eeEEecCceeEEEEEECCCCCeEEecCc---CceeE
Confidence            67899999999999999999999999 99999999887432   2223345678999999999976555554   99999


Q ss_pred             EEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCce
Q psy14511        109 LWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPER  188 (488)
Q Consensus       109 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (488)
                      ||++.+...                                                                       
T Consensus       123 iy~ls~~d~-----------------------------------------------------------------------  131 (343)
T KOG0286|consen  123 IYPLSTRDA-----------------------------------------------------------------------  131 (343)
T ss_pred             EEecccccc-----------------------------------------------------------------------
Confidence            999864321                                                                       


Q ss_pred             eecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEE
Q psy14511        189 ILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDL  268 (488)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i  268 (488)
                                                            .+......++.+ |.+.+.|..|.+| ..|+++ +.|.+..+
T Consensus       132 --------------------------------------~g~~~v~r~l~g-HtgylScC~f~dD-~~ilT~-SGD~TCal  170 (343)
T KOG0286|consen  132 --------------------------------------EGNVRVSRELAG-HTGYLSCCRFLDD-NHILTG-SGDMTCAL  170 (343)
T ss_pred             --------------------------------------cccceeeeeecC-ccceeEEEEEcCC-CceEec-CCCceEEE
Confidence                                                  011111223444 9999999999885 478888 99999999


Q ss_pred             EECCcceeeeeeccccccEEEEEe---cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEec
Q psy14511        269 WHEQEERLIQKLRTHMHQVIAMCW---NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN  345 (488)
Q Consensus       269 ~d~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d  345 (488)
                      ||+++++.+..+.+|.+.|.++++   +++.+++|+-|+..++||++.+ ...+.+.+|++.|+++.|.|+|.-+++|+|
T Consensus       171 WDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~-~c~qtF~ghesDINsv~ffP~G~afatGSD  249 (343)
T KOG0286|consen  171 WDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSG-QCVQTFEGHESDINSVRFFPSGDAFATGSD  249 (343)
T ss_pred             EEcccceEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCc-ceeEeecccccccceEEEccCCCeeeecCC
Confidence            999999999999999999999988   6899999999999999999997 689999999999999999999999999995


Q ss_pred             -CeEEEEECCCCCCCccccee-------eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCC
Q psy14511        346 -NTVKIWDFRQLDAKRPLGLI-------VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQ  417 (488)
Q Consensus       346 -~~i~iwd~~~~~~~~~~~~~-------~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~  417 (488)
                       ++.++||++.......+...       ..+||..|++|++  |..|.++.+||.-.++.+..|.+|.++|+++..+|||
T Consensus       250 D~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfa--gy~d~~c~vWDtlk~e~vg~L~GHeNRvScl~~s~DG  327 (343)
T KOG0286|consen  250 DATCRLYDLRADQELAVYSHDSIICGITSVAFSKSGRLLFA--GYDDFTCNVWDTLKGERVGVLAGHENRVSCLGVSPDG  327 (343)
T ss_pred             CceeEEEeecCCcEEeeeccCcccCCceeEEEcccccEEEe--eecCCceeEeeccccceEEEeeccCCeeEEEEECCCC
Confidence             99999999987544333222       2299999999999  8999999999999999999999999999999999999


Q ss_pred             CEEEEEeCCCcEEEEe
Q psy14511        418 TCVAAASADETISIWN  433 (488)
Q Consensus       418 ~~l~t~~~dg~v~iw~  433 (488)
                      ..++|||.|..++||.
T Consensus       328 ~av~TgSWDs~lriW~  343 (343)
T KOG0286|consen  328 MAVATGSWDSTLRIWA  343 (343)
T ss_pred             cEEEecchhHheeecC
Confidence            9999999999999994

>KOG0315|consensus

Probab=100.00  E-value=5.8e-42  Score=263.96  Aligned_cols=288  Identities=20%  Similarity=0.291  Sum_probs=238.1

Q ss_pred             CceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCccccccccccee
Q psy14511          5 GNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVK   84 (488)
Q Consensus         5 g~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~~v~   84 (488)
                      .-+||++++|.+|++|...++.+. .+++...+.|+.++..||+++||+++...|++||++++.. .++.++.+|++.|+
T Consensus        10 ~viLvsA~YDhTIRfWqa~tG~C~-rTiqh~dsqVNrLeiTpdk~~LAaa~~qhvRlyD~~S~np-~Pv~t~e~h~kNVt   87 (311)
T KOG0315|consen   10 PVILVSAGYDHTIRFWQALTGICS-RTIQHPDSQVNRLEITPDKKDLAAAGNQHVRLYDLNSNNP-NPVATFEGHTKNVT   87 (311)
T ss_pred             ceEEEeccCcceeeeeehhcCeEE-EEEecCccceeeEEEcCCcchhhhccCCeeEEEEccCCCC-CceeEEeccCCceE
Confidence            457899999999999999999976 4566777789999999999999999999999999998764 47888999999999


Q ss_pred             EEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccc
Q psy14511         85 AIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKR  164 (488)
Q Consensus        85 ~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (488)
                      ++.|..+|+.+++.+.   ||+++|||++...+.+                                             
T Consensus        88 aVgF~~dgrWMyTgse---Dgt~kIWdlR~~~~qR---------------------------------------------  119 (311)
T KOG0315|consen   88 AVGFQCDGRWMYTGSE---DGTVKIWDLRSLSCQR---------------------------------------------  119 (311)
T ss_pred             EEEEeecCeEEEecCC---CceEEEEeccCcccch---------------------------------------------
Confidence            9999999988776665   9999999997633211                                             


Q ss_pred             cccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCce
Q psy14511        165 TVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYI  244 (488)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i  244 (488)
                                                                                          .++    +..+|
T Consensus       120 --------------------------------------------------------------------~~~----~~spV  127 (311)
T KOG0315|consen  120 --------------------------------------------------------------------NYQ----HNSPV  127 (311)
T ss_pred             --------------------------------------------------------------------hcc----CCCCc
Confidence                                                                                111    66899


Q ss_pred             EEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeec-cccccEEEEEe--cCCEEEEeecCCeEEEEECcCCC-----c
Q psy14511        245 SCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLR-THMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHS-----D  316 (488)
Q Consensus       245 ~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~-~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~-----~  316 (488)
                      +++..+|+...|+++ ..+|.|++||+....+...+- .....+.++..  ||.+++++...|+.++|++-+..     .
T Consensus       128 n~vvlhpnQteLis~-dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~  206 (311)
T KOG0315|consen  128 NTVVLHPNQTELISG-DQSGNIRVWDLGENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELE  206 (311)
T ss_pred             ceEEecCCcceEEee-cCCCcEEEEEccCCccccccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccce
Confidence            999999999999999 999999999999876665543 33456666666  89999999999999999997643     3


Q ss_pred             cceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCc
Q psy14511        317 YPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRL  395 (488)
Q Consensus       317 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~  395 (488)
                      ++..+..|+..+....+|||+++||+++ |.+++||+.++.                                      .
T Consensus       207 P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~--------------------------------------~  248 (311)
T KOG0315|consen  207 PVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDF--------------------------------------F  248 (311)
T ss_pred             EhhheecccceEEEEEECCCCcEEEeecCCceEEEEecCCc--------------------------------------e
Confidence            5566888999999999999999999987 577777766532                                      1


Q ss_pred             ceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccc-cccccCCcceEE
Q psy14511        396 HLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKR-KARQVGSGSSLE  453 (488)
Q Consensus       396 ~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~-~~~~~~~v~~~~  453 (488)
                      +....+++|...+++++||.||+||+||+.|+.+++|++..++..+ ..+|.....+++
T Consensus       249 kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v~qy~gh~K~~vc~~  307 (311)
T KOG0315|consen  249 KLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGKEVRQYQGHHKAAVCVA  307 (311)
T ss_pred             eeEEEeecCCceEEeeeeccCccEEEecCCCCceeecccccCceeeecCCcccccEEEE
Confidence            4456788999999999999999999999999999999999998763 344544444433

>KOG0272|consensus

Probab=100.00  E-value=9.8e-44  Score=293.92  Aligned_cols=268  Identities=20%  Similarity=0.299  Sum_probs=242.3

Q ss_pred             ccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccC--CcEEEEec-CCeEEEEeccccCcCCCcccccc
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPN--GRYLASGS-NNTVKIWDFRQLDAKRPQVNNQC   78 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~--g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~   78 (488)
                      +-|++.||||+.+|.++||+..+.. ...++.+|...|.++.|+|.  +.-||+++ ||++++|++++   ..++..+.+
T Consensus       184 S~ds~~laT~swsG~~kvW~~~~~~-~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~---e~~l~~l~g  259 (459)
T KOG0272|consen  184 SRDSKHLATGSWSGLVKVWSVPQCN-LLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQ---ETPLQDLEG  259 (459)
T ss_pred             ecCCCeEEEeecCCceeEeecCCcc-eeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCC---Ccchhhhhc
Confidence            4589999999999999999999985 55789999999999999996  67899999 99999999986   467788999


Q ss_pred             cccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccce
Q psy14511         79 HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKV  158 (488)
Q Consensus        79 h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (488)
                      |...|..++|+|+|++|.+++-   |.+-++||++++..+....+|+..+..+.+.+++                     
T Consensus       260 H~~RVs~VafHPsG~~L~Tasf---D~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DG---------------------  315 (459)
T KOG0272|consen  260 HLARVSRVAFHPSGKFLGTASF---DSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDG---------------------  315 (459)
T ss_pred             chhhheeeeecCCCceeeeccc---ccchhhcccccchhhHhhcccccccceeEecCCC---------------------
Confidence            9999999999999999888876   9999999999999988888887777666655543                     


Q ss_pred             eccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCC
Q psy14511        159 LNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPT  238 (488)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~  238 (488)
                                                                        ..+.+++.|..-++||+++++++..+..  
T Consensus       316 --------------------------------------------------SL~~tGGlD~~~RvWDlRtgr~im~L~g--  343 (459)
T KOG0272|consen  316 --------------------------------------------------SLAATGGLDSLGRVWDLRTGRCIMFLAG--  343 (459)
T ss_pred             --------------------------------------------------ceeeccCccchhheeecccCcEEEEecc--
Confidence                                                              3456677999999999999998766654  


Q ss_pred             CCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe---cCCEEEEeecCCeEEEEECcCCC
Q psy14511        239 YDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW---NGNLLSCGTIGGNILHYDVRTHS  315 (488)
Q Consensus       239 ~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~i~d~~~~~  315 (488)
                       |..+|.+++|+|+|..++++ +.|++++|||++..+.+.++.+|.+-|+.+.|   .|.+|++++.|+++++|..++. 
T Consensus       344 -H~k~I~~V~fsPNGy~lATg-s~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~-  420 (459)
T KOG0272|consen  344 -HIKEILSVAFSPNGYHLATG-SSDNTCKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTW-  420 (459)
T ss_pred             -cccceeeEeECCCceEEeec-CCCCcEEEeeecccccceecccccchhhheEecccCCeEEEEcccCcceeeecCCCc-
Confidence             99999999999999999999 99999999999999999999999999999999   4799999999999999999986 


Q ss_pred             ccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEE
Q psy14511        316 DYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWD  352 (488)
Q Consensus       316 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd  352 (488)
                      .+.+.+.+|.+.|.++..+||++++++++ |.++++|.
T Consensus       421 ~~~ksLaGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~  458 (459)
T KOG0272|consen  421 SPLKSLAGHEGKVISLDISPDSQAIATSSFDRTIKLWR  458 (459)
T ss_pred             ccchhhcCCccceEEEEeccCCceEEEeccCceeeecc
Confidence            58899999999999999999999999999 89999995

>KOG0319|consensus

Probab=100.00  E-value=2.2e-41  Score=299.06  Aligned_cols=429  Identities=15%  Similarity=0.208  Sum_probs=316.1

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSA   82 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~   82 (488)
                      +-.+|++|..|+++++||+.+.......+..|...|++++|++|+.-+++++ |..|.|||+.+.+..+.+.    -...
T Consensus       160 ~~~lL~sg~~D~~v~vwnl~~~~tcl~~~~~H~S~vtsL~~~~d~~~~ls~~RDkvi~vwd~~~~~~l~~lp----~ye~  235 (775)
T KOG0319|consen  160 NRWLLASGATDGTVRVWNLNDKRTCLHTMILHKSAVTSLAFSEDSLELLSVGRDKVIIVWDLVQYKKLKTLP----LYES  235 (775)
T ss_pred             chhheeecCCCceEEEEEcccCchHHHHHHhhhhheeeeeeccCCceEEEeccCcEEEEeehhhhhhhheec----hhhh
Confidence            4567899999999999999977655677899999999999999999999998 9999999996544333222    3356


Q ss_pred             eeEEEEecC-----CCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccc
Q psy14511         83 VKAIAWCPW-----EPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKK  157 (488)
Q Consensus        83 v~~l~~~~~-----~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (488)
                      +.++.+-++     +.++++.|+   +|.+++||.+++++.........+... ...+...... .+...      .+..
T Consensus       236 ~E~vv~l~~~~~~~~~~~~TaG~---~g~~~~~d~es~~~~~~~~~~~~~e~~-~~~~~~~~~~-~l~vt------aeQn  304 (775)
T KOG0319|consen  236 LESVVRLREELGGKGEYIITAGG---SGVVQYWDSESGKCVYKQRQSDSEEID-HLLAIESMSQ-LLLVT------AEQN  304 (775)
T ss_pred             eeeEEEechhcCCcceEEEEecC---CceEEEEecccchhhhhhccCCchhhh-cceeccccCc-eEEEE------ccce
Confidence            777777777     668888888   999999999999887666554311100 0000000000 00000      0011


Q ss_pred             eeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeee---CCCcEEEEECCCeEEEEECCCCceEEEE
Q psy14511        158 VLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDW---GYHDTLAVALDTSVYTWNTKTNKTQLLV  234 (488)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~d~~v~iw~~~~~~~~~~~  234 (488)
                      ++-+....                     ..+...--.. .-.+..+.+   ..+.+++++..+.+++|+..+..+.   
T Consensus       305 l~l~d~~~---------------------l~i~k~ivG~-ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~---  359 (775)
T KOG0319|consen  305 LFLYDEDE---------------------LTIVKQIVGY-NDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQ---  359 (775)
T ss_pred             EEEEEccc---------------------cEEehhhcCC-chhheeeeecCCccceEEEEeCCCceEEEecCCCceE---
Confidence            11110000                     0000000000 001111222   3367888889999999999888776   


Q ss_pred             ecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcc----eeeeeeccccccEEEEEe---cCCEEEEeecCCeEE
Q psy14511        235 EYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEE----RLIQKLRTHMHQVIAMCW---NGNLLSCGTIGGNIL  307 (488)
Q Consensus       235 ~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~----~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~  307 (488)
                      -+++ |...|.++....+|-+|+++ +.|.++++|.++.+    .++....+|.+.|.+++.   ...++++++.|++++
T Consensus       360 ii~G-H~e~vlSL~~~~~g~llat~-sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK  437 (775)
T KOG0319|consen  360 IIPG-HTEAVLSLDVWSSGDLLATG-SKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLK  437 (775)
T ss_pred             EEeC-chhheeeeeecccCcEEEEe-cCCceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEE
Confidence            3344 99999999977777777777 99999999988443    345566789999999999   358999999999999


Q ss_pred             EEECcCCC--ccc------eeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCccccee-----eeeecCCC
Q psy14511        308 HYDVRTHS--DYP------TAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLI-----VPKLKREG  373 (488)
Q Consensus       308 i~d~~~~~--~~~------~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~-----~~~~~~~~  373 (488)
                      +|++...+  ...      .....|...|++++.+|+.+++|+|+ |.+.+||+++.......+..+     ...|+|..
T Consensus       438 ~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~d  517 (775)
T KOG0319|consen  438 LWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKND  517 (775)
T ss_pred             EecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecccccceeeecccCceEEEEeeCCccceEEEEecccc
Confidence            99997622  111      13457899999999999999999999 799999999966544444333     23999999


Q ss_pred             CEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcc-ccccccCCcceE
Q psy14511        374 RELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKK-RKARQVGSGSSL  452 (488)
Q Consensus       374 ~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~-~~~~~~~~v~~~  452 (488)
                      +.+++  .+.|++|+||.+.++.+++++.||...|..+.|-.+|+.|++++.||.+++|++.+.+.. .+-.|..+|.++
T Consensus       518 q~laT--~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt~eC~~tlD~H~DrvWaL  595 (775)
T KOG0319|consen  518 QLLAT--CSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNECEMTLDAHNDRVWAL  595 (775)
T ss_pred             ceeEe--ccCCceEEEEEeccceeeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEeccchhhhhhhhhccceeEEE
Confidence            99999  577999999999999999999999999999999999999999999999999999999988 567899999999


Q ss_pred             EeecCCCceEEEEeeecccccceeeEEEEee
Q psy14511        453 EFAILKQPVSLTALLRSRAVEKQQHAIAYTV  483 (488)
Q Consensus       453 ~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~~  483 (488)
                      .-+|....+       ..+..|..+..|...
T Consensus       596 ~~~~~~~~~-------~tgg~Dg~i~~wkD~  619 (775)
T KOG0319|consen  596 SVSPLLDMF-------VTGGGDGRIIFWKDV  619 (775)
T ss_pred             eecCcccee-------EecCCCeEEEEeecC
Confidence            999977644       334556666665543

>KOG0291|consensus

Probab=100.00  E-value=2.4e-39  Score=286.89  Aligned_cols=383  Identities=15%  Similarity=0.207  Sum_probs=300.3

Q ss_pred             cc--CCceEEEeecCCeEEEEEcccCccc-ceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccc-----------
Q psy14511          2 CW--NGNLLSCGTIGGNILHYDVRTHSDY-PTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQ-----------   66 (488)
Q Consensus         2 ~~--dg~~la~g~~dg~i~iwd~~~~~~~-~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~-----------   66 (488)
                      .|  |.++|++|+.|-+++||+++..+.+ ...+.+|.++|.++-|..+..-|.+.+ ||.+.+|....           
T Consensus       152 ~Ws~DSr~l~~gsrD~s~rl~~v~~~k~~~~~~l~gHkd~VvacfF~~~~~~l~tvskdG~l~~W~~~~~P~~~~~~~kd  231 (893)
T KOG0291|consen  152 DWSDDSRLLVTGSRDLSARLFGVDGNKNLFTYALNGHKDYVVACFFGANSLDLYTVSKDGALFVWTCDLRPPELDKAEKD  231 (893)
T ss_pred             EeccCCceEEeccccceEEEEEeccccccceEeccCCCcceEEEEeccCcceEEEEecCceEEEEEecCCCccccccccc
Confidence            46  8999999999999999999876653 456889999999999999999999998 99999998862           


Q ss_pred             ------------cCc-CCC-------cccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCC
Q psy14511         67 ------------LDA-KRP-------QVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQ  126 (488)
Q Consensus        67 ------------~~~-~~~-------~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~  126 (488)
                                  ++. ..+       ..-+......|++.+|++..+ +++++-.  .|...++.+....++..+.....
T Consensus       232 ~eg~~d~~~~~~~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH~~t~-~lvvgFs--sG~f~LyelP~f~lih~LSis~~  308 (893)
T KOG0291|consen  232 EEGSDDEEMDEDGEEKTHKIFWYKTKKHYLNQNSSKVTAAAFHKGTN-LLVVGFS--SGEFGLYELPDFNLIHSLSISDQ  308 (893)
T ss_pred             ccccccccccccchhhhcceEEEEEEeeeecccccceeeeeccCCce-EEEEEec--CCeeEEEecCCceEEEEeecccc
Confidence                        011 000       000112236799999998664 5666653  88999999998888877766544


Q ss_pred             ccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeee
Q psy14511        127 QANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDW  206 (488)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (488)
                      ++..+.++.                                                                       
T Consensus       309 ~I~t~~~N~-----------------------------------------------------------------------  317 (893)
T KOG0291|consen  309 KILTVSFNS-----------------------------------------------------------------------  317 (893)
T ss_pred             eeeEEEecc-----------------------------------------------------------------------
Confidence            333333221                                                                       


Q ss_pred             CCCcEEEEE-CCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccc
Q psy14511        207 GYHDTLAVA-LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMH  285 (488)
Q Consensus       207 ~~~~~~~~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~  285 (488)
                      .++-++.++ .-|++.+|+..+...+  ++.++ |...+++++++|||+++++| +.||.|++||.+.+-|..++..|..
T Consensus       318 tGDWiA~g~~klgQLlVweWqsEsYV--lKQQg-H~~~i~~l~YSpDgq~iaTG-~eDgKVKvWn~~SgfC~vTFteHts  393 (893)
T KOG0291|consen  318 TGDWIAFGCSKLGQLLVWEWQSESYV--LKQQG-HSDRITSLAYSPDGQLIATG-AEDGKVKVWNTQSGFCFVTFTEHTS  393 (893)
T ss_pred             cCCEEEEcCCccceEEEEEeecccee--eeccc-cccceeeEEECCCCcEEEec-cCCCcEEEEeccCceEEEEeccCCC
Confidence            124444444 4579999999887654  44555 89999999999999999999 9999999999999999999999999


Q ss_pred             cEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-c-CeEEEEECCCCCCCcc
Q psy14511        286 QVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-N-NTVKIWDFRQLDAKRP  361 (488)
Q Consensus       286 ~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d-~~i~iwd~~~~~~~~~  361 (488)
                      .|+++.|  .++.+++.+.||+|+.||+...+..........-...+++..|.|..+..|+ | -.|.+|++++++....
T Consensus       394 ~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDi  473 (893)
T KOG0291|consen  394 GVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDI  473 (893)
T ss_pred             ceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeeh
Confidence            9999999  7999999999999999999887544444444445578899999999999998 6 8999999999976665


Q ss_pred             cceee---e--eecCCCCEEEEEccCCCCeEEEEeCCCc-ceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecC
Q psy14511        362 LGLIV---P--KLKREGRELVTSHGKQDCSLKMWEYPRL-HLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCF  435 (488)
Q Consensus       362 ~~~~~---~--~~~~~~~~l~~~~g~~~~~i~i~d~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~  435 (488)
                      +..+.   .  +|+|++..|++  ++.|.+|++||+-.. ..+.+++ +...+..++|+|||+.||++..||.|.+||+.
T Consensus       474 LsGHEgPVs~l~f~~~~~~LaS--~SWDkTVRiW~if~s~~~vEtl~-i~sdvl~vsfrPdG~elaVaTldgqItf~d~~  550 (893)
T KOG0291|consen  474 LSGHEGPVSGLSFSPDGSLLAS--GSWDKTVRIWDIFSSSGTVETLE-IRSDVLAVSFRPDGKELAVATLDGQITFFDIK  550 (893)
T ss_pred             hcCCCCcceeeEEccccCeEEe--ccccceEEEEEeeccCceeeeEe-eccceeEEEEcCCCCeEEEEEecceEEEEEhh
Confidence            54442   2  79999999999  899999999998543 3444444 66779999999999999999999999999998


Q ss_pred             CCCcccc---------------------ccccCCcceEEeecCCCceEEEE
Q psy14511        436 PRDKKRK---------------------ARQVGSGSSLEFAILKQPVSLTA  465 (488)
Q Consensus       436 ~~~~~~~---------------------~~~~~~v~~~~~s~~~~~~~~~~  465 (488)
                      ...+...                     .......+.+++|+||..+...+
T Consensus       551 ~~~q~~~IdgrkD~~~gR~~~D~~ta~~sa~~K~Ftti~ySaDG~~IlAgG  601 (893)
T KOG0291|consen  551 EAVQVGSIDGRKDLSGGRKETDRITAENSAKGKTFTTICYSADGKCILAGG  601 (893)
T ss_pred             hceeeccccchhhccccccccceeehhhcccCCceEEEEEcCCCCEEEecC
Confidence            6543310                     12235578999999999885543

>KOG0286|consensus

Probab=100.00  E-value=1.8e-39  Score=256.16  Aligned_cols=272  Identities=19%  Similarity=0.301  Sum_probs=233.3

Q ss_pred             Ccc--CCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCc---CCCcc
Q psy14511          1 MCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDA---KRPQV   74 (488)
Q Consensus         1 ~~~--dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~---~~~~~   74 (488)
                      |.|  |.++|++++.||.+.|||..+.... +.++-....|..++|+|.|+++|+|+ |+...||++.+.+.   .+...
T Consensus        61 ~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~-haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~~d~~g~~~v~r  139 (343)
T KOG0286|consen   61 MDWSTDSRRIVSASQDGKLIVWDSFTTNKV-HAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPLSTRDAEGNVRVSR  139 (343)
T ss_pred             eEecCCcCeEEeeccCCeEEEEEcccccce-eEEecCceeEEEEEECCCCCeEEecCcCceeEEEecccccccccceeee
Confidence            456  9999999999999999999887643 55667788999999999999999999 99999999986421   13344


Q ss_pred             cccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeecc
Q psy14511         75 NNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEID  154 (488)
Q Consensus        75 ~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (488)
                      .+.+|++-+.++.|.+|+ .|+++++   |.+..+||+++|+....+.+|...+..+.++|.                  
T Consensus       140 ~l~gHtgylScC~f~dD~-~ilT~SG---D~TCalWDie~g~~~~~f~GH~gDV~slsl~p~------------------  197 (343)
T KOG0286|consen  140 ELAGHTGYLSCCRFLDDN-HILTGSG---DMTCALWDIETGQQTQVFHGHTGDVMSLSLSPS------------------  197 (343)
T ss_pred             eecCccceeEEEEEcCCC-ceEecCC---CceEEEEEcccceEEEEecCCcccEEEEecCCC------------------
Confidence            588999999999999876 5666665   999999999999999999988665554444331                  


Q ss_pred             ccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEE
Q psy14511        155 RKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLV  234 (488)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~  234 (488)
                                                                          +++.+++++.|+..++||++.+...+.+
T Consensus       198 ----------------------------------------------------~~ntFvSg~cD~~aklWD~R~~~c~qtF  225 (343)
T KOG0286|consen  198 ----------------------------------------------------DGNTFVSGGCDKSAKLWDVRSGQCVQTF  225 (343)
T ss_pred             ----------------------------------------------------CCCeEEecccccceeeeeccCcceeEee
Confidence                                                                2467889999999999999999887766


Q ss_pred             ecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecc--ccccEEEEEe--cCCEEEEeecCCeEEEEE
Q psy14511        235 EYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRT--HMHQVIAMCW--NGNLLSCGTIGGNILHYD  310 (488)
Q Consensus       235 ~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~--~~~~v~~~~~--~~~~l~~~~~dg~i~i~d  310 (488)
                      ..   |...|++++|.|+|.-++++ +.|++.++||++..+.+..+..  ...+|++++|  .|++|++|..|.++.+||
T Consensus       226 ~g---hesDINsv~ffP~G~afatG-SDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWD  301 (343)
T KOG0286|consen  226 EG---HESDINSVRFFPSGDAFATG-SDDATCRLYDLRADQELAVYSHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWD  301 (343)
T ss_pred             cc---cccccceEEEccCCCeeeec-CCCceeEEEeecCCcEEeeeccCcccCCceeEEEcccccEEEeeecCCceeEee
Confidence            55   99999999999999999999 9999999999999888887753  3457899999  799999999999999999


Q ss_pred             CcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEE
Q psy14511        311 VRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWD  352 (488)
Q Consensus       311 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd  352 (488)
                      .-.+ +....+.+|...|.++..+|||..+++++ |..++||.
T Consensus       302 tlk~-e~vg~L~GHeNRvScl~~s~DG~av~TgSWDs~lriW~  343 (343)
T KOG0286|consen  302 TLKG-ERVGVLAGHENRVSCLGVSPDGMAVATGSWDSTLRIWA  343 (343)
T ss_pred             cccc-ceEEEeeccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence            9875 46778899999999999999999999999 89999994

>KOG0265|consensus

Probab=100.00  E-value=1.6e-39  Score=257.37  Aligned_cols=280  Identities=21%  Similarity=0.371  Sum_probs=241.2

Q ss_pred             eeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEE
Q psy14511         30 TAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVR  108 (488)
Q Consensus        30 ~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~  108 (488)
                      ..+.+|.+.|..+.|+|+|.+||+|+ |..|.+|++....  +-...+++|+++|..+.|.+|+..+++++.   |++++
T Consensus        41 m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdc--eN~~~lkgHsgAVM~l~~~~d~s~i~S~gt---Dk~v~  115 (338)
T KOG0265|consen   41 MLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDC--ENFWVLKGHSGAVMELHGMRDGSHILSCGT---DKTVR  115 (338)
T ss_pred             hhcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccc--cceeeeccccceeEeeeeccCCCEEEEecC---CceEE
Confidence            35689999999999999999999998 9999999976422  233457799999999999999999999988   99999


Q ss_pred             EEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCce
Q psy14511        109 LWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPER  188 (488)
Q Consensus       109 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (488)
                      .||+++|+..+.++.                                                                 
T Consensus       116 ~wD~~tG~~~rk~k~-----------------------------------------------------------------  130 (338)
T KOG0265|consen  116 GWDAETGKRIRKHKG-----------------------------------------------------------------  130 (338)
T ss_pred             EEecccceeeehhcc-----------------------------------------------------------------
Confidence            999999987655443                                                                 


Q ss_pred             eecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEE
Q psy14511        189 ILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDL  268 (488)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i  268 (488)
                                                                         |...++++.-+.-|..++.+++.|+++++
T Consensus       131 ---------------------------------------------------h~~~vNs~~p~rrg~~lv~SgsdD~t~kl  159 (338)
T KOG0265|consen  131 ---------------------------------------------------HTSFVNSLDPSRRGPQLVCSGSDDGTLKL  159 (338)
T ss_pred             ---------------------------------------------------ccceeeecCccccCCeEEEecCCCceEEE
Confidence                                                               55556666655567777777799999999


Q ss_pred             EECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-c
Q psy14511        269 WHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-N  345 (488)
Q Consensus       269 ~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d  345 (488)
                      ||+++...+++++ ...+++++.|  .+..+.+|+-|+.|++||++.+ .....+.+|.++|+.+..+|+|.++.+-+ |
T Consensus       160 ~D~R~k~~~~t~~-~kyqltAv~f~d~s~qv~sggIdn~ikvWd~r~~-d~~~~lsGh~DtIt~lsls~~gs~llsnsMd  237 (338)
T KOG0265|consen  160 WDIRKKEAIKTFE-NKYQLTAVGFKDTSDQVISGGIDNDIKVWDLRKN-DGLYTLSGHADTITGLSLSRYGSFLLSNSMD  237 (338)
T ss_pred             Eeecccchhhccc-cceeEEEEEecccccceeeccccCceeeeccccC-cceEEeecccCceeeEEeccCCCcccccccc
Confidence            9999988887775 4678899999  5789999999999999999985 57889999999999999999999999998 8


Q ss_pred             CeEEEEECCCCCCCcc-ccee------------eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEE
Q psy14511        346 NTVKIWDFRQLDAKRP-LGLI------------VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAV  412 (488)
Q Consensus       346 ~~i~iwd~~~~~~~~~-~~~~------------~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~  412 (488)
                      .++++||++.....++ +..+            -+.|+|+++.+.+  |+.|..+++||......+..+.||.+.|++++
T Consensus       238 ~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp~~~~i~a--gs~dr~vyvwd~~~r~~lyklpGh~gsvn~~~  315 (338)
T KOG0265|consen  238 NTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSPNGTKITA--GSADRFVYVWDTTSRRILYKLPGHYGSVNEVD  315 (338)
T ss_pred             ceEEEEEecccCCCCceEEEeecchhhhhhhcceeeccCCCCcccc--ccccceEEEeecccccEEEEcCCcceeEEEee
Confidence            9999999987654443 3222            2399999999999  89999999999999899999999999999999


Q ss_pred             EcCCCCEEEEEeCCCcEEEEec
Q psy14511        413 LSPDQTCVAAASADETISIWNC  434 (488)
Q Consensus       413 ~s~~~~~l~t~~~dg~v~iw~~  434 (488)
                      |+|...+|.+++.|.+|++=++
T Consensus       316 Fhp~e~iils~~sdk~i~lgei  337 (338)
T KOG0265|consen  316 FHPTEPIILSCSSDKTIYLGEI  337 (338)
T ss_pred             ecCCCcEEEEeccCceeEeecc
Confidence            9999999999999999987443

>KOG0279|consensus

Probab=100.00  E-value=6.2e-39  Score=251.50  Aligned_cols=299  Identities=21%  Similarity=0.312  Sum_probs=240.7

Q ss_pred             cceeecccCceEEEEEEccC-CcEEEEec-CCeEEEEeccccC--cCCCcccccccccceeEEEEecCCCeEEeeeCCcc
Q psy14511         28 YPTAITREGDVVCGLKWSPN-GRYLASGS-NNTVKIWDFRQLD--AKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGIC  103 (488)
Q Consensus        28 ~~~~~~~h~~~V~~l~~sp~-g~~las~~-d~~i~vwd~~~~~--~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~  103 (488)
                      +..++.+|.+.|+.++..+. ...|.+++ |.++.+|++....  ...++..+.||+..|..+..++||++.++.+.   
T Consensus         7 l~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~sw---   83 (315)
T KOG0279|consen    7 LRGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASW---   83 (315)
T ss_pred             eeeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccc---
Confidence            45678999999999999997 45777788 9999999997532  22356678999999999999999998777776   


Q ss_pred             cceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeeccccccccccc
Q psy14511        104 DQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVK  183 (488)
Q Consensus       104 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (488)
                      |+++++||+.+|+..+.+.+|...+..+.++++                                               
T Consensus        84 D~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~d-----------------------------------------------  116 (315)
T KOG0279|consen   84 DGTLRLWDLATGESTRRFVGHTKDVLSVAFSTD-----------------------------------------------  116 (315)
T ss_pred             cceEEEEEecCCcEEEEEEecCCceEEEEecCC-----------------------------------------------
Confidence            999999999999999999998766655554443                                               


Q ss_pred             CCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCC--CCeEEEEeC
Q psy14511        184 AKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPR--TTDLAVTNT  261 (488)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~  261 (488)
                                              +.++++++.|.+|.+|+...+........ . +...|+|+.|+|+  ..+|+.+ +
T Consensus       117 ------------------------n~qivSGSrDkTiklwnt~g~ck~t~~~~-~-~~~WVscvrfsP~~~~p~Ivs~-s  169 (315)
T KOG0279|consen  117 ------------------------NRQIVSGSRDKTIKLWNTLGVCKYTIHED-S-HREWVSCVRFSPNESNPIIVSA-S  169 (315)
T ss_pred             ------------------------CceeecCCCcceeeeeeecccEEEEEecC-C-CcCcEEEEEEcCCCCCcEEEEc-c
Confidence                                    36799999999999999987654443332 2 3789999999998  5677777 9


Q ss_pred             CCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcE
Q psy14511        262 CTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRY  339 (488)
Q Consensus       262 ~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~  339 (488)
                      .|++|++||+++.+....+.+|.+.++.+.+  ||.++++|+.||.+.+||++.++.  .....|...|.+++|+|+..+
T Consensus       170 ~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~--lysl~a~~~v~sl~fspnryw  247 (315)
T KOG0279|consen  170 WDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKN--LYSLEAFDIVNSLCFSPNRYW  247 (315)
T ss_pred             CCceEEEEccCCcchhhccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCce--eEeccCCCeEeeEEecCCcee
Confidence            9999999999999999999999999999888  899999999999999999998753  344567788999999999999


Q ss_pred             EEEEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCE
Q psy14511        340 LASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTC  419 (488)
Q Consensus       340 l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~  419 (488)
                      |+.+.+..|+|||+.+......+..-       +.      |              .   ..+...-...+++||+||..
T Consensus       248 L~~at~~sIkIwdl~~~~~v~~l~~d-------~~------g--------------~---s~~~~~~~clslaws~dG~t  297 (315)
T KOG0279|consen  248 LCAATATSIKIWDLESKAVVEELKLD-------GI------G--------------P---SSKAGDPICLSLAWSADGQT  297 (315)
T ss_pred             EeeccCCceEEEeccchhhhhhcccc-------cc------c--------------c---ccccCCcEEEEEEEcCCCcE
Confidence            99888888999998876332221110       00      0              0   11112234578999999999


Q ss_pred             EEEEeCCCcEEEEecC
Q psy14511        420 VAAASADETISIWNCF  435 (488)
Q Consensus       420 l~t~~~dg~v~iw~~~  435 (488)
                      |++|-.|+.|++|.+.
T Consensus       298 Lf~g~td~~irv~qv~  313 (315)
T KOG0279|consen  298 LFAGYTDNVIRVWQVA  313 (315)
T ss_pred             EEeeecCCcEEEEEee
Confidence            9999999999999875

>KOG0306|consensus

Probab=100.00  E-value=2.2e-38  Score=280.71  Aligned_cols=414  Identities=17%  Similarity=0.234  Sum_probs=306.9

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccceeec-ccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCccccccccc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYPTAIT-REGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLS   81 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~-~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~   81 (488)
                      +|+++|+. ..-.|.+||+++++....... .....|+|++-+|+.-+||.|- ||.|+||+..+.   ....++.+|..
T Consensus        33 ~Gr~va~~-a~E~vn~WdlRtge~~~~l~~~~~k~evt~l~~~~d~l~lAVGYaDGsVqif~~~s~---~~~~tfngHK~  108 (888)
T KOG0306|consen   33 KGRAVAVS-ALEQVNIWDLRTGEIEKKLILLKKKAEVTCLRSSDDILLLAVGYADGSVQIFSLESE---EILITFNGHKA  108 (888)
T ss_pred             CCcEEEEe-ccccEeEEeeecchhhhhhhhhcccceEEEeeccCCcceEEEEecCceEEeeccCCC---ceeeeeccccc
Confidence            37777753 345799999999953333232 3445899999999999999997 999999999863   45667899999


Q ss_pred             ceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecc
Q psy14511         82 AVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQ  161 (488)
Q Consensus        82 ~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (488)
                      +|+.+.|...|..|++.+.   |+.|.+||+-...-...+.+|...+....|.-..   ...++.+-+    ...++|..
T Consensus       109 AVt~l~fd~~G~rlaSGsk---Dt~IIvwDlV~E~Gl~rL~GHkd~iT~~~F~~~~---~~lvS~sKD----s~iK~WdL  178 (888)
T KOG0306|consen  109 AVTTLKFDKIGTRLASGSK---DTDIIVWDLVGEEGLFRLRGHKDSITQALFLNGD---SFLVSVSKD----SMIKFWDL  178 (888)
T ss_pred             ceEEEEEcccCceEeecCC---CccEEEEEeccceeeEEeecchHHHhHHhccCCC---eEEEEeccC----ceEEEEec
Confidence            9999999999977666554   9999999998888788888876655544443311   111111100    01111111


Q ss_pred             ccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCC-------------
Q psy14511        162 SKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTN-------------  228 (488)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~-------------  228 (488)
                      ....                    ....    -..+...+..+...++.+++++.|+.+.+|++...             
T Consensus       179 ~tqh--------------------Cf~T----hvd~r~Eiw~l~~~~~~lvt~~~dse~~v~~L~~~~D~~~~~~~~s~~  234 (888)
T KOG0306|consen  179 ETQH--------------------CFET----HVDHRGEIWALVLDEKLLVTAGTDSELKVWELAFEDDEKETNRYISTK  234 (888)
T ss_pred             ccce--------------------eeeE----EecccceEEEEEEecceEEEEecCCceEEEEeecccccccccccceee
Confidence            1110                    0000    00111223445556678888889999999988100             


Q ss_pred             -----------ceEEE----------------------------------------------------------------
Q psy14511        229 -----------KTQLL----------------------------------------------------------------  233 (488)
Q Consensus       229 -----------~~~~~----------------------------------------------------------------  233 (488)
                                 +....                                                                
T Consensus       235 ~~G~~~rqsk~R~i~l~~d~s~r~~~c~g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka~t~e~~~~v~~sl~~~i~r~  314 (888)
T KOG0306|consen  235 LRGTFIRQSKGREINLVTDFSDRFLVCQGADKVIELFRIRSKEEIAKILSKKLKRAKKKAETEENEDDVEKSLSDEIKRL  314 (888)
T ss_pred             ccceeeeccCCceeEEeecCcccEEEEecchhhhhheeecCHHHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHH
Confidence                       00000                                                                


Q ss_pred             ----------------------------------------------------EecCCCCCCceEEEEEcCCCCeEEEEeC
Q psy14511        234 ----------------------------------------------------VEYPTYDNAYISCVAWKPRTTDLAVTNT  261 (488)
Q Consensus       234 ----------------------------------------------------~~~~~~~~~~i~~~~~~~~~~~l~~~~~  261 (488)
                                                                          +...+ |...|.+++++.+...++++  
T Consensus       315 ~~ir~~~kiks~dv~~~~~~~~~lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~G-HR~dVRsl~vS~d~~~~~Sg--  391 (888)
T KOG0306|consen  315 ETIRTSAKIKSFDVTPSGGTENTLVLLANNTVEWYSLENSGKTSPEADRTSNIEIGG-HRSDVRSLCVSSDSILLASG--  391 (888)
T ss_pred             HheechhheeEEEEEecCCcceeEEEeecCceEEEEeccCCCCCccccccceeeecc-chhheeEEEeecCceeeeec--
Confidence                                                                12233 66678888888776555544  


Q ss_pred             CCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcE
Q psy14511        262 CTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRY  339 (488)
Q Consensus       262 ~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~  339 (488)
                      ..+.+++|+..+.++++++...  .+.+..|  .+++++.|...|.+.+||+... ..+..+.+|.+.|+.++.+||++.
T Consensus       392 a~~SikiWn~~t~kciRTi~~~--y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~-~l~Eti~AHdgaIWsi~~~pD~~g  468 (888)
T KOG0306|consen  392 AGESIKIWNRDTLKCIRTITCG--YILASKFVPGDRYIVLGTKNGELQVFDLASA-SLVETIRAHDGAIWSISLSPDNKG  468 (888)
T ss_pred             CCCcEEEEEccCcceeEEeccc--cEEEEEecCCCceEEEeccCCceEEEEeehh-hhhhhhhccccceeeeeecCCCCc
Confidence            7889999999999999999765  5555555  6899999999999999999885 577788899999999999999999


Q ss_pred             EEEEe-cCeEEEEECCCCCC-----Ccccc------------eeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEE
Q psy14511        340 LASGS-NNTVKIWDFRQLDA-----KRPLG------------LIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEEL  401 (488)
Q Consensus       340 l~~~~-d~~i~iwd~~~~~~-----~~~~~------------~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~  401 (488)
                      +++++ |.+|++||..-...     .+.+.            .....+||||++|++  +--|+++++|-+.+.+....+
T Consensus       469 ~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaV--sLLdnTVkVyflDtlKFflsL  546 (888)
T KOG0306|consen  469 FVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAV--SLLDNTVKVYFLDTLKFFLSL  546 (888)
T ss_pred             eEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCcEEEE--EeccCeEEEEEecceeeeeee
Confidence            99999 79999999753211     11111            112289999999999  799999999999999999999


Q ss_pred             eeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcc-ccccccCCcceEEeecCCCceEE
Q psy14511        402 KIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKK-RKARQVGSGSSLEFAILKQPVSL  463 (488)
Q Consensus       402 ~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~-~~~~~~~~v~~~~~s~~~~~~~~  463 (488)
                      .||.-||.++..|||++.++|||.|.+|++|-++-|... ....|...|+++.|.|....|-.
T Consensus       547 YGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fAHdDSvm~V~F~P~~~~FFt  609 (888)
T KOG0306|consen  547 YGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDDSVMSVQFLPKTHLFFT  609 (888)
T ss_pred             cccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhcccCceeEEEEcccceeEEE
Confidence            999999999999999999999999999999999999987 56889999999999997666533

>KOG0273|consensus

Probab=100.00  E-value=9.3e-39  Score=268.15  Aligned_cols=306  Identities=19%  Similarity=0.358  Sum_probs=253.6

Q ss_pred             ceEEEeecCCeEEEEEcccCcc-------ccee--ec----ccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCC
Q psy14511          6 NLLSCGTIGGNILHYDVRTHSD-------YPTA--IT----REGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKR   71 (488)
Q Consensus         6 ~~la~g~~dg~i~iwd~~~~~~-------~~~~--~~----~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~   71 (488)
                      .+||+|+.|-..++|++.....       +.+.  +.    .....|++++|+.+|.+||+|+ ||.+++|+...    .
T Consensus       192 ~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~LatG~~~G~~riw~~~G----~  267 (524)
T KOG0273|consen  192 GLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLLATGSEDGEARIWNKDG----N  267 (524)
T ss_pred             hhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCeEEEeecCcEEEEEecCc----h
Confidence            4789999999999999874111       1110  11    1235799999999999999999 99999999874    3


Q ss_pred             CcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeee
Q psy14511         72 PQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGF  151 (488)
Q Consensus        72 ~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (488)
                      .+.++..|.++|.++.|+.+|.||++.+-   |+++.+||..+|...+.+..++.+.                       
T Consensus       268 l~~tl~~HkgPI~slKWnk~G~yilS~~v---D~ttilwd~~~g~~~q~f~~~s~~~-----------------------  321 (524)
T KOG0273|consen  268 LISTLGQHKGPIFSLKWNKKGTYILSGGV---DGTTILWDAHTGTVKQQFEFHSAPA-----------------------  321 (524)
T ss_pred             hhhhhhccCCceEEEEEcCCCCEEEeccC---CccEEEEeccCceEEEeeeeccCCc-----------------------
Confidence            55567889999999999999999999887   9999999999998877776653321                       


Q ss_pred             eccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC-CCcEEEEECCCeEEEEECCCCce
Q psy14511        152 EIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG-YHDTLAVALDTSVYTWNTKTNKT  230 (488)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~v~iw~~~~~~~  230 (488)
                                                                        ..++|. .+.+++.+.|+.|+++.+....+
T Consensus       322 --------------------------------------------------lDVdW~~~~~F~ts~td~~i~V~kv~~~~P  351 (524)
T KOG0273|consen  322 --------------------------------------------------LDVDWQSNDEFATSSTDGCIHVCKVGEDRP  351 (524)
T ss_pred             --------------------------------------------------cceEEecCceEeecCCCceEEEEEecCCCc
Confidence                                                              114453 35677788999999999988887


Q ss_pred             EEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe-----------cCCEEEE
Q psy14511        231 QLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW-----------NGNLLSC  299 (488)
Q Consensus       231 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~-----------~~~~l~~  299 (488)
                      ...+..   |.++|.++.|+|.+..|+++ +.|++++||.+........+.+|...|..+.|           .+..+++
T Consensus       352 ~~t~~G---H~g~V~alk~n~tg~LLaS~-SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~s  427 (524)
T KOG0273|consen  352 VKTFIG---HHGEVNALKWNPTGSLLASC-SDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLAS  427 (524)
T ss_pred             ceeeec---ccCceEEEEECCCCceEEEe-cCCCeeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEE
Confidence            766654   99999999999999999999 99999999999999999999999999999998           2468999


Q ss_pred             eecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEE
Q psy14511        300 GTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTS  379 (488)
Q Consensus       300 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~  379 (488)
                      ++.|+.|++||+..+ .++..+..|..+|++++|+|+|+++|+|+                                   
T Consensus       428 as~dstV~lwdv~~g-v~i~~f~kH~~pVysvafS~~g~ylAsGs-----------------------------------  471 (524)
T KOG0273|consen  428 ASFDSTVKLWDVESG-VPIHTLMKHQEPVYSVAFSPNGRYLASGS-----------------------------------  471 (524)
T ss_pred             eecCCeEEEEEccCC-ceeEeeccCCCceEEEEecCCCcEEEecC-----------------------------------
Confidence            999999999999986 58888999999999999999999999885                                   


Q ss_pred             ccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecC
Q psy14511        380 HGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCF  435 (488)
Q Consensus       380 ~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~  435 (488)
                         .||.|++|+.++++.++.+.+ .+.|..++|+.+|.+|..+-.|+.+++-|+.
T Consensus       472 ---~dg~V~iws~~~~~l~~s~~~-~~~Ifel~Wn~~G~kl~~~~sd~~vcvldlr  523 (524)
T KOG0273|consen  472 ---LDGCVHIWSTKTGKLVKSYQG-TGGIFELCWNAAGDKLGACASDGSVCVLDLR  523 (524)
T ss_pred             ---CCCeeEeccccchheeEeecC-CCeEEEEEEcCCCCEEEEEecCCCceEEEec
Confidence               344455555556666777664 3459999999999999999999999998874

>KOG0273|consensus

Probab=100.00  E-value=8.3e-39  Score=268.44  Aligned_cols=308  Identities=24%  Similarity=0.355  Sum_probs=255.8

Q ss_pred             ccCceEEEEEEccCCc-EEEEec-CCeEEEEeccccCcC-CCcccc----------cccccceeEEEEecCCCeEEeeeC
Q psy14511         34 REGDVVCGLKWSPNGR-YLASGS-NNTVKIWDFRQLDAK-RPQVNN----------QCHLSAVKAIAWCPWEPTLLATGG  100 (488)
Q Consensus        34 ~h~~~V~~l~~sp~g~-~las~~-d~~i~vwd~~~~~~~-~~~~~~----------~~h~~~v~~l~~~~~~~~l~~~~~  100 (488)
                      .|..+|.+.+|+|-.. +||+++ |-..++|++...... ..+..+          ...+..|++++|+.+|.. +++|.
T Consensus       176 ~~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~-LatG~  254 (524)
T KOG0273|consen  176 RHESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTL-LATGS  254 (524)
T ss_pred             cCCCceEEEecCchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCe-EEEee
Confidence            4999999999999766 888888 999999998741100 000001          113468999999999965 55555


Q ss_pred             CcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccc
Q psy14511        101 GICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPR  180 (488)
Q Consensus       101 ~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (488)
                        +||.+++|+.. |..+..                                                            
T Consensus       255 --~~G~~riw~~~-G~l~~t------------------------------------------------------------  271 (524)
T KOG0273|consen  255 --EDGEARIWNKD-GNLIST------------------------------------------------------------  271 (524)
T ss_pred             --cCcEEEEEecC-chhhhh------------------------------------------------------------
Confidence              39999999964 322111                                                            


Q ss_pred             cccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEe
Q psy14511        181 KVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTN  260 (488)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~  260 (488)
                                                                           +.  . |.++|.++.|+..|.+|+++ 
T Consensus       272 -----------------------------------------------------l~--~-HkgPI~slKWnk~G~yilS~-  294 (524)
T KOG0273|consen  272 -----------------------------------------------------LG--Q-HKGPIFSLKWNKKGTYILSG-  294 (524)
T ss_pred             -----------------------------------------------------hh--c-cCCceEEEEEcCCCCEEEec-
Confidence                                                                 11  1 89999999999999999999 


Q ss_pred             CCCCcEEEEECCcceeeeeeccccccEEEEEe-cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcE
Q psy14511        261 TCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW-NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRY  339 (488)
Q Consensus       261 ~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~  339 (488)
                      +.|+++.+||..+++..+.+..|..+-..+.| +...+++.+.|+.|+++.+... .+...+.+|.++|.++.|+|.|.+
T Consensus       295 ~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~-~P~~t~~GH~g~V~alk~n~tg~L  373 (524)
T KOG0273|consen  295 GVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGED-RPVKTFIGHHGEVNALKWNPTGSL  373 (524)
T ss_pred             cCCccEEEEeccCceEEEeeeeccCCccceEEecCceEeecCCCceEEEEEecCC-CcceeeecccCceEEEEECCCCce
Confidence            99999999999999999999999998888999 7899999999999999999875 588888899999999999999999


Q ss_pred             EEEEec-CeEEEEECCCCCCCcccceee-----eeecCCC---------CEEEEEccCCCCeEEEEeCCCcceeEEEeec
Q psy14511        340 LASGSN-NTVKIWDFRQLDAKRPLGLIV-----PKLKREG---------RELVTSHGKQDCSLKMWEYPRLHLIEELKIH  404 (488)
Q Consensus       340 l~~~~d-~~i~iwd~~~~~~~~~~~~~~-----~~~~~~~---------~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~  404 (488)
                      |++++| ++++||..........+..+.     ..|+|.|         ..+++  .+.|++|++||+..+.++.+|..|
T Consensus       374 LaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~s--as~dstV~lwdv~~gv~i~~f~kH  451 (524)
T KOG0273|consen  374 LASCSDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLAS--ASFDSTVKLWDVESGVPIHTLMKH  451 (524)
T ss_pred             EEEecCCCeeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEE--eecCCeEEEEEccCCceeEeeccC
Confidence            999995 999999988765555444432     2666654         34555  688999999999999999999999


Q ss_pred             cccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccccccccCCcceEEeecCCCceEEEE
Q psy14511        405 QERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKARQVGSGSSLEFAILKQPVSLTA  465 (488)
Q Consensus       405 ~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~  465 (488)
                      ..+|++++|||+|+++|+|+.||.|.+|++.+++..+.....+.|..++|+.+|..+....
T Consensus       452 ~~pVysvafS~~g~ylAsGs~dg~V~iws~~~~~l~~s~~~~~~Ifel~Wn~~G~kl~~~~  512 (524)
T KOG0273|consen  452 QEPVYSVAFSPNGRYLASGSLDGCVHIWSTKTGKLVKSYQGTGGIFELCWNAAGDKLGACA  512 (524)
T ss_pred             CCceEEEEecCCCcEEEecCCCCeeEeccccchheeEeecCCCeEEEEEEcCCCCEEEEEe
Confidence            9999999999999999999999999999999999998888888999999999998775544

>KOG0293|consensus

Probab=100.00  E-value=4e-39  Score=265.90  Aligned_cols=284  Identities=21%  Similarity=0.303  Sum_probs=232.4

Q ss_pred             eeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEE
Q psy14511         30 TAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVR  108 (488)
Q Consensus        30 ~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~  108 (488)
                      +++..|.+.|.-+.||++|+|||+++ |.+..+|++......+...++.+|..+|..+.||||.++|++++.   |..+.
T Consensus       218 qil~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~---~e~~~  294 (519)
T KOG0293|consen  218 QILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGF---DEVLS  294 (519)
T ss_pred             hhHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCc---hHhee
Confidence            56789999999999999999999999 999999998765556667788999999999999999999999998   88899


Q ss_pred             EEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCce
Q psy14511        109 LWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPER  188 (488)
Q Consensus       109 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (488)
                      +||+.+|.....+...                                                                
T Consensus       295 lwDv~tgd~~~~y~~~----------------------------------------------------------------  310 (519)
T KOG0293|consen  295 LWDVDTGDLRHLYPSG----------------------------------------------------------------  310 (519)
T ss_pred             eccCCcchhhhhcccC----------------------------------------------------------------
Confidence            9999988754322211                                                                


Q ss_pred             eecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEE
Q psy14511        189 ILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDL  268 (488)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i  268 (488)
                                                                         +...+.+.+|.|||..+++| +.|+.+..
T Consensus       311 ---------------------------------------------------~~~S~~sc~W~pDg~~~V~G-s~dr~i~~  338 (519)
T KOG0293|consen  311 ---------------------------------------------------LGFSVSSCAWCPDGFRFVTG-SPDRTIIM  338 (519)
T ss_pred             ---------------------------------------------------cCCCcceeEEccCCceeEec-CCCCcEEE
Confidence                                                               34568899999999999999 99999999


Q ss_pred             EECCcceeeeeeccc-cccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-
Q psy14511        269 WHEQEERLIQKLRTH-MHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-  344 (488)
Q Consensus       269 ~d~~~~~~~~~~~~~-~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-  344 (488)
                      ||++. ......++- ...|.+++.  ||+.+++.+.|..|++|+.++..  -..+.....+|++++.|.|++++.+.- 
T Consensus       339 wdlDg-n~~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~--dr~lise~~~its~~iS~d~k~~LvnL~  415 (519)
T KOG0293|consen  339 WDLDG-NILGNWEGVRDPKVHDLAITYDGKYVLLVTVDKKIRLYNREARV--DRGLISEEQPITSFSISKDGKLALVNLQ  415 (519)
T ss_pred             ecCCc-chhhcccccccceeEEEEEcCCCcEEEEEecccceeeechhhhh--hhccccccCceeEEEEcCCCcEEEEEcc
Confidence            99876 334444432 345777776  89999999999999999998732  222444456799999999999888877 


Q ss_pred             cCeEEEEECCCCCCCccccee-------eeeecCCC-CEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCC
Q psy14511        345 NNTVKIWDFRQLDAKRPLGLI-------VPKLKREG-RELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPD  416 (488)
Q Consensus       345 d~~i~iwd~~~~~~~~~~~~~-------~~~~~~~~-~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~  416 (488)
                      +..+++||++.....+.....       -.+|.... .++++  |++|++|+||+..+++++.++.||...|++++|+|.
T Consensus       416 ~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaS--GSED~kvyIWhr~sgkll~~LsGHs~~vNcVswNP~  493 (519)
T KOG0293|consen  416 DQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIAS--GSEDSKVYIWHRISGKLLAVLSGHSKTVNCVSWNPA  493 (519)
T ss_pred             cCeeEEeecchhhHHHHhhcccccceEEEeccCCCCcceEEe--cCCCceEEEEEccCCceeEeecCCcceeeEEecCCC
Confidence            599999999966544333222       22776555 55555  999999999999999999999999999999999995


Q ss_pred             -CCEEEEEeCCCcEEEEecCCC
Q psy14511        417 -QTCVAAASADETISIWNCFPR  437 (488)
Q Consensus       417 -~~~l~t~~~dg~v~iw~~~~~  437 (488)
                       ..++|++|+||+|+||.....
T Consensus       494 ~p~m~ASasDDgtIRIWg~~~~  515 (519)
T KOG0293|consen  494 DPEMFASASDDGTIRIWGPSDN  515 (519)
T ss_pred             CHHHhhccCCCCeEEEecCCcc
Confidence             568899999999999987754

>KOG0296|consensus

Probab=100.00  E-value=4.2e-38  Score=255.93  Aligned_cols=320  Identities=18%  Similarity=0.242  Sum_probs=252.3

Q ss_pred             eeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEE
Q psy14511         30 TAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVR  108 (488)
Q Consensus        30 ~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~  108 (488)
                      ..+..|++.|.+++.+|+.+++|+|+ |..-.+|+..+++   ....+.+|...|+++.|+.||.+|++.+-   +|.|+
T Consensus        58 ~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge---~~~eltgHKDSVt~~~FshdgtlLATGdm---sG~v~  131 (399)
T KOG0296|consen   58 VTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGE---FAGELTGHKDSVTCCSFSHDGTLLATGDM---SGKVL  131 (399)
T ss_pred             eehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCc---ceeEecCCCCceEEEEEccCceEEEecCC---CccEE
Confidence            46789999999999999999999998 9999999999866   45567899999999999999976555444   99999


Q ss_pred             EEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCce
Q psy14511        109 LWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPER  188 (488)
Q Consensus       109 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (488)
                      ||...++.....+.......                                                            
T Consensus       132 v~~~stg~~~~~~~~e~~di------------------------------------------------------------  151 (399)
T KOG0296|consen  132 VFKVSTGGEQWKLDQEVEDI------------------------------------------------------------  151 (399)
T ss_pred             EEEcccCceEEEeecccCce------------------------------------------------------------
Confidence            99999998776664221100                                                            


Q ss_pred             eecCCCccccceeeeeeeCC--CcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcE
Q psy14511        189 ILEAPSIINDFYTSGLDWGY--HDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYI  266 (488)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i  266 (488)
                                   .=+.|++  .-+++++.||.+..|.+..+...+++..   |..++++=.|.|+|+.++++ ..||+|
T Consensus       152 -------------eWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~G---h~~~ct~G~f~pdGKr~~tg-y~dgti  214 (399)
T KOG0296|consen  152 -------------EWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSG---HNSPCTCGEFIPDGKRILTG-YDDGTI  214 (399)
T ss_pred             -------------EEEEecccccEEEeecCCCcEEEEECCCcceeeEecC---CCCCcccccccCCCceEEEE-ecCceE
Confidence                         0122333  3567777999999999999765555544   99999999999999999999 999999


Q ss_pred             EEEECCcceeeeeecc-ccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCcc-------ceeeecCCccEEEEEEcc-
Q psy14511        267 DLWHEQEERLIQKLRT-HMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDY-------PTAITREGDVVCGLKWSP-  335 (488)
Q Consensus       267 ~i~d~~~~~~~~~~~~-~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~-------~~~~~~~~~~i~~~~~s~-  335 (488)
                      ++|+..+++++..+.. ......++.+  .+..++.|..++.+++-+..+++..       ......+...+.++.+.| 
T Consensus       215 ~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~  294 (399)
T KOG0296|consen  215 IVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPS  294 (399)
T ss_pred             EEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhccc
Confidence            9999999999888763 2334455555  6788888888888888777665421       111223444455555554 


Q ss_pred             --CCcEEEEEe-cCeEEEEECCCCCCCccccee--e--eeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccE
Q psy14511        336 --NGRYLASGS-NNTVKIWDFRQLDAKRPLGLI--V--PKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERI  408 (488)
Q Consensus       336 --~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~--~--~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v  408 (488)
                        .=.+.|+|+ ||+|.|||+.....+......  +  ..|-+ ..+|++  ++.+|.|+.||.++|+++.++.+|...|
T Consensus       295 ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c~he~~V~~l~w~~-t~~l~t--~c~~g~v~~wDaRtG~l~~~y~GH~~~I  371 (399)
T KOG0296|consen  295 SSKLPLAACGSVDGTIAIYDLAASTLRHICEHEDGVTKLKWLN-TDYLLT--ACANGKVRQWDARTGQLKFTYTGHQMGI  371 (399)
T ss_pred             ccccchhhcccccceEEEEecccchhheeccCCCceEEEEEcC-cchhee--eccCceEEeeeccccceEEEEecCchhe
Confidence              456778888 899999999876554443322  2  26767 678888  6889999999999999999999999999


Q ss_pred             EEEEEcCCCCEEEEEeCCCcEEEEecC
Q psy14511        409 LSAVLSPDQTCVAAASADETISIWNCF  435 (488)
Q Consensus       409 ~~~~~s~~~~~l~t~~~dg~v~iw~~~  435 (488)
                      .+++++|+.++++|+|.|++.+||++.
T Consensus       372 l~f~ls~~~~~vvT~s~D~~a~VF~v~  398 (399)
T KOG0296|consen  372 LDFALSPQKRLVVTVSDDNTALVFEVP  398 (399)
T ss_pred             eEEEEcCCCcEEEEecCCCeEEEEecC
Confidence            999999999999999999999999875

>KOG0295|consensus

Probab=100.00  E-value=2.2e-38  Score=257.44  Aligned_cols=287  Identities=19%  Similarity=0.332  Sum_probs=247.0

Q ss_pred             cceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccce
Q psy14511         28 YPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQT  106 (488)
Q Consensus        28 ~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~  106 (488)
                      +.+.+.+|..+|+.+-|+|+-.++++++ |.+|++||..+++.   ...+++|+..|.+++|+..|++++++++   |-.
T Consensus       100 l~~~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~---e~~LrGHt~sv~di~~~a~Gk~l~tcSs---Dl~  173 (406)
T KOG0295|consen  100 LVQKLAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETGEL---ERSLRGHTDSVFDISFDASGKYLATCSS---DLS  173 (406)
T ss_pred             chhhhhccccceeeeeeccCceEEEEecCCceEEEEEccchhh---hhhhhccccceeEEEEecCccEEEecCC---ccc
Confidence            4556789999999999999999999998 99999999999764   5568999999999999999998877776   888


Q ss_pred             EEEEecCC-CeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCC
Q psy14511        107 VRLWNSMN-GKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAK  185 (488)
Q Consensus       107 i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (488)
                      +++||..+ .++++...++...+..+.+.|.                                                 
T Consensus       174 ~~LWd~~~~~~c~ks~~gh~h~vS~V~f~P~-------------------------------------------------  204 (406)
T KOG0295|consen  174 AKLWDFDTFFRCIKSLIGHEHGVSSVFFLPL-------------------------------------------------  204 (406)
T ss_pred             hhheeHHHHHHHHHHhcCcccceeeEEEEec-------------------------------------------------
Confidence            99999876 4555555565554444443332                                                 


Q ss_pred             CceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCc
Q psy14511        186 PERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEY  265 (488)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~  265 (488)
                                            ++.+++++.|..|+.|++.++.++..+..   |...+..++.+.||..++++ +.|.+
T Consensus       205 ----------------------gd~ilS~srD~tik~We~~tg~cv~t~~~---h~ewvr~v~v~~DGti~As~-s~dqt  258 (406)
T KOG0295|consen  205 ----------------------GDHILSCSRDNTIKAWECDTGYCVKTFPG---HSEWVRMVRVNQDGTIIASC-SNDQT  258 (406)
T ss_pred             ----------------------CCeeeecccccceeEEecccceeEEeccC---chHhEEEEEecCCeeEEEec-CCCce
Confidence                                  36788899999999999999998877665   88899999999999999988 99999


Q ss_pred             EEEEECCcceeeeeeccccccEEEEEe------------cC-----CEEEEeecCCeEEEEECcCCCccceeeecCCccE
Q psy14511        266 IDLWHEQEERLIQKLRTHMHQVIAMCW------------NG-----NLLSCGTIGGNILHYDVRTHSDYPTAITREGDVV  328 (488)
Q Consensus       266 i~i~d~~~~~~~~~~~~~~~~v~~~~~------------~~-----~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i  328 (488)
                      +++|-+.++++...++.|+.+|-+++|            .+     .++.+++.|++|++||+.++ .++..+.+|...|
T Consensus       259 l~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg-~cL~tL~ghdnwV  337 (406)
T KOG0295|consen  259 LRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTG-MCLFTLVGHDNWV  337 (406)
T ss_pred             EEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCC-eEEEEEeccccee
Confidence            999999999999999999999999988            12     59999999999999999997 5889999999999


Q ss_pred             EEEEEccCCcEEEEEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccE
Q psy14511        329 CGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERI  408 (488)
Q Consensus       329 ~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v  408 (488)
                      ..++|+|.|+||+++.|                                      |+++++||+++++++.++..|..-|
T Consensus       338 r~~af~p~Gkyi~ScaD--------------------------------------Dktlrvwdl~~~~cmk~~~ah~hfv  379 (406)
T KOG0295|consen  338 RGVAFSPGGKYILSCAD--------------------------------------DKTLRVWDLKNLQCMKTLEAHEHFV  379 (406)
T ss_pred             eeeEEcCCCeEEEEEec--------------------------------------CCcEEEEEeccceeeeccCCCccee
Confidence            99999999999999964                                      4445555555667888889999999


Q ss_pred             EEEEEcCCCCEEEEEeCCCcEEEEec
Q psy14511        409 LSAVLSPDQTCVAAASADETISIWNC  434 (488)
Q Consensus       409 ~~~~~s~~~~~l~t~~~dg~v~iw~~  434 (488)
                      +++.|+.+..+++||+.|..+++|..
T Consensus       380 t~lDfh~~~p~VvTGsVdqt~KvwEc  405 (406)
T KOG0295|consen  380 TSLDFHKTAPYVVTGSVDQTVKVWEC  405 (406)
T ss_pred             EEEecCCCCceEEeccccceeeeeec
Confidence            99999999999999999999999974

>KOG0282|consensus

Probab=100.00  E-value=4.3e-39  Score=271.14  Aligned_cols=279  Identities=19%  Similarity=0.387  Sum_probs=238.2

Q ss_pred             eeecccCceEEEEEEcc-CCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceE
Q psy14511         30 TAITREGDVVCGLKWSP-NGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTV  107 (488)
Q Consensus        30 ~~~~~h~~~V~~l~~sp-~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i  107 (488)
                      ..+.+|+..|+++.|.| .+.+|++++ |+.|+||++..  ..+++.++.+|+.+|.+++|+++|..+++++-   |+.+
T Consensus       208 ~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~--~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sf---D~~l  282 (503)
T KOG0282|consen  208 HNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYD--DRRCLRTFKGHRKPVRDASFNNCGTSFLSASF---DRFL  282 (503)
T ss_pred             eeccCCccccchhhhccceeeEEEecCCCceEEEEEEec--CcceehhhhcchhhhhhhhccccCCeeeeeec---ceee
Confidence            46789999999999999 899999999 99999999976  35677889999999999999999999998886   9999


Q ss_pred             EEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCc
Q psy14511        108 RLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPE  187 (488)
Q Consensus       108 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (488)
                      ++||+++|++...+.                                                                 
T Consensus       283 KlwDtETG~~~~~f~-----------------------------------------------------------------  297 (503)
T KOG0282|consen  283 KLWDTETGQVLSRFH-----------------------------------------------------------------  297 (503)
T ss_pred             eeeccccceEEEEEe-----------------------------------------------------------------
Confidence            999999998654432                                                                 


Q ss_pred             eeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCC-CeEEEEeCCCCcE
Q psy14511        188 RILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRT-TDLAVTNTCTEYI  266 (488)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~~~~~i  266 (488)
                                                                          ....++|+.|+|++ +.+++| +.|+.|
T Consensus       298 ----------------------------------------------------~~~~~~cvkf~pd~~n~fl~G-~sd~ki  324 (503)
T KOG0282|consen  298 ----------------------------------------------------LDKVPTCVKFHPDNQNIFLVG-GSDKKI  324 (503)
T ss_pred             ----------------------------------------------------cCCCceeeecCCCCCcEEEEe-cCCCcE
Confidence                                                                34468899999999 555555 999999


Q ss_pred             EEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe
Q psy14511        267 DLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS  344 (488)
Q Consensus       267 ~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~  344 (488)
                      +.||+++++.++.+..|-+.|..+.|  +|+.+++.+.|+++++|+.+.+-........+.-...++..+|+++++++-+
T Consensus       325 ~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs  404 (503)
T KOG0282|consen  325 RQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQS  404 (503)
T ss_pred             EEEeccchHHHHHHHhhhhheeeeEEccCCceEeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhc
Confidence            99999999999999999999999999  7999999999999999999886433333333334466899999999999988


Q ss_pred             -cCeEEEEECCCCCCCccccee----------eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEE
Q psy14511        345 -NNTVKIWDFRQLDAKRPLGLI----------VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVL  413 (488)
Q Consensus       345 -d~~i~iwd~~~~~~~~~~~~~----------~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~  413 (488)
                       |+.|.++.+...-.......+          ...|||||++|++  |..||.+.+||.++-+++..+++|..++..+.|
T Consensus       405 ~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~S--GdsdG~v~~wdwkt~kl~~~lkah~~~ci~v~w  482 (503)
T KOG0282|consen  405 MDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCS--GDSDGKVNFWDWKTTKLVSKLKAHDQPCIGVDW  482 (503)
T ss_pred             cCceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEe--ecCCccEEEeechhhhhhhccccCCcceEEEEe
Confidence             799999997644322221111          1299999999999  999999999999999999999999999999999


Q ss_pred             cCC-CCEEEEEeCCCcEEEEe
Q psy14511        414 SPD-QTCVAAASADETISIWN  433 (488)
Q Consensus       414 s~~-~~~l~t~~~dg~v~iw~  433 (488)
                      +|. ...+||++.||.|++|+
T Consensus       483 HP~e~Skvat~~w~G~Ikiwd  503 (503)
T KOG0282|consen  483 HPVEPSKVATCGWDGLIKIWD  503 (503)
T ss_pred             cCCCcceeEecccCceeEecC
Confidence            996 45899999999999996

>KOG0315|consensus

Probab=100.00  E-value=1.5e-37  Score=239.76  Aligned_cols=280  Identities=20%  Similarity=0.300  Sum_probs=233.2

Q ss_pred             CCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceee
Q psy14511         92 EPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQF  171 (488)
Q Consensus        92 ~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (488)
                      ..-++++++  +|.+|++|...+|.+.+++.-...+++.+.+.+                                    
T Consensus         9 ~~viLvsA~--YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTp------------------------------------   50 (311)
T KOG0315|consen    9 DPVILVSAG--YDHTIRFWQALTGICSRTIQHPDSQVNRLEITP------------------------------------   50 (311)
T ss_pred             CceEEEecc--CcceeeeeehhcCeEEEEEecCccceeeEEEcC------------------------------------
Confidence            345566655  599999999999999999887765555444433                                    


Q ss_pred             ecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcC
Q psy14511        172 LRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKP  251 (488)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~  251 (488)
                                                          .+..++++....|++||+.++....+..+++ |...|+++.|..
T Consensus        51 ------------------------------------dk~~LAaa~~qhvRlyD~~S~np~Pv~t~e~-h~kNVtaVgF~~   93 (311)
T KOG0315|consen   51 ------------------------------------DKKDLAAAGNQHVRLYDLNSNNPNPVATFEG-HTKNVTAVGFQC   93 (311)
T ss_pred             ------------------------------------CcchhhhccCCeeEEEEccCCCCCceeEEec-cCCceEEEEEee
Confidence                                                2467788888999999999998877778887 999999999999


Q ss_pred             CCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEE
Q psy14511        252 RTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVC  329 (488)
Q Consensus       252 ~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~  329 (488)
                      +|++++++ +.||+++|||++...+.+.++ |..+|+++..  +...|++|..+|.|++||+.+.......+.....+|.
T Consensus        94 dgrWMyTg-seDgt~kIWdlR~~~~qR~~~-~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~  171 (311)
T KOG0315|consen   94 DGRWMYTG-SEDGTVKIWDLRSLSCQRNYQ-HNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQ  171 (311)
T ss_pred             cCeEEEec-CCCceEEEEeccCcccchhcc-CCCCcceEEecCCcceEEeecCCCcEEEEEccCCccccccCCCCCccee
Confidence            99999999 999999999999966666664 6799999998  5678999999999999999987555556666678899


Q ss_pred             EEEEccCCcEEEEEec-CeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccE
Q psy14511        330 GLKWSPNGRYLASGSN-NTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERI  408 (488)
Q Consensus       330 ~~~~s~~~~~l~~~~d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v  408 (488)
                      ++...|||++|+.+.+ |..++|++-+...                                 ....+++..+++|++.+
T Consensus       172 sl~v~~dgsml~a~nnkG~cyvW~l~~~~~---------------------------------~s~l~P~~k~~ah~~~i  218 (311)
T KOG0315|consen  172 SLTVMPDGSMLAAANNKGNCYVWRLLNHQT---------------------------------ASELEPVHKFQAHNGHI  218 (311)
T ss_pred             eEEEcCCCcEEEEecCCccEEEEEccCCCc---------------------------------cccceEhhheecccceE
Confidence            9999999999999996 9999999875311                                 12245677899999999


Q ss_pred             EEEEEcCCCCEEEEEeCCCcEEEEecCCCCcc--ccccccCCcceEEeecCCCceEEEEeeecccccceeeEEEEeeccc
Q psy14511        409 LSAVLSPDQTCVAAASADETISIWNCFPRDKK--RKARQVGSGSSLEFAILKQPVSLTALLRSRAVEKQQHAIAYTVFGE  486 (488)
Q Consensus       409 ~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~--~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~  486 (488)
                      ..+.+|||+++||++|.|.+++||+.++--..  .+.+|..-+...+||.|++++       ..++.+....+|..+.|+
T Consensus       219 l~C~lSPd~k~lat~ssdktv~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~Yl-------vTassd~~~rlW~~~~~k  291 (311)
T KOG0315|consen  219 LRCLLSPDVKYLATCSSDKTVKIWNTDDFFKLELVLTGHQRWVWDCAFSADGEYL-------VTASSDHTARLWDLSAGK  291 (311)
T ss_pred             EEEEECCCCcEEEeecCCceEEEEecCCceeeEEEeecCCceEEeeeeccCccEE-------EecCCCCceeecccccCc
Confidence            99999999999999999999999999987222  456677789999999999988       557778888999999888


Q ss_pred             cC
Q psy14511        487 AV  488 (488)
Q Consensus       487 ~~  488 (488)
                      +|
T Consensus       292 ~v  293 (311)
T KOG0315|consen  292 EV  293 (311)
T ss_pred             ee
Confidence            54

>KOG0284|consensus

Probab=100.00  E-value=7.1e-39  Score=264.03  Aligned_cols=269  Identities=23%  Similarity=0.396  Sum_probs=221.8

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccc-ccc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQC-HLS   81 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~-h~~   81 (488)
                      +|+.|++|++.|...+|+..+-. ....++.|..+|+++.|+++|.++++|+ +|.|++|+.+-    ..+..... |..
T Consensus       107 eGRRLltgs~SGEFtLWNg~~fn-FEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnm----nnVk~~~ahh~e  181 (464)
T KOG0284|consen  107 EGRRLLTGSQSGEFTLWNGTSFN-FETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNM----NNVKIIQAHHAE  181 (464)
T ss_pred             CCceeEeecccccEEEecCceee-HHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccch----hhhHHhhHhhhh
Confidence            89999999999999999985544 3456789999999999999999999999 99999999863    23333444 558


Q ss_pred             ceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecc
Q psy14511         82 AVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQ  161 (488)
Q Consensus        82 ~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (488)
                      .|++++|+|++..+++++.   |++|+|||....+....+                                        
T Consensus       182 aIRdlafSpnDskF~t~Sd---Dg~ikiWdf~~~kee~vL----------------------------------------  218 (464)
T KOG0284|consen  182 AIRDLAFSPNDSKFLTCSD---DGTIKIWDFRMPKEERVL----------------------------------------  218 (464)
T ss_pred             hhheeccCCCCceeEEecC---CCeEEEEeccCCchhhee----------------------------------------
Confidence            9999999998877666665   999999998765532222                                        


Q ss_pred             ccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCC
Q psy14511        162 SKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDN  241 (488)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~  241 (488)
                                                                                                 .+ |.
T Consensus       219 ---------------------------------------------------------------------------~G-Hg  222 (464)
T KOG0284|consen  219 ---------------------------------------------------------------------------RG-HG  222 (464)
T ss_pred             ---------------------------------------------------------------------------cc-CC
Confidence                                                                                       12 77


Q ss_pred             CceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccce
Q psy14511        242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPT  319 (488)
Q Consensus       242 ~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~  319 (488)
                      -.+.+++|+|....++++ +.|..|++||.+++.++.++..|+..|.++.|  ++++|++++.|..++++|+++. +.+.
T Consensus       223 wdVksvdWHP~kgLiasg-skDnlVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~m-kEl~  300 (464)
T KOG0284|consen  223 WDVKSVDWHPTKGLIASG-SKDNLVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTM-KELF  300 (464)
T ss_pred             CCcceeccCCccceeEEc-cCCceeEeecCCCcchhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHh-HHHH
Confidence            789999999999999999 99999999999999999999999999999999  6899999999999999999964 5788


Q ss_pred             eeecCCccEEEEEEccCCc-EEEEEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCccee
Q psy14511        320 AITREGDVVCGLKWSPNGR-YLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLI  398 (488)
Q Consensus       320 ~~~~~~~~i~~~~~s~~~~-~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~  398 (488)
                      .+.+|...+++++|+|-.. +|.+++                                      .||.|..|.+...+++
T Consensus       301 ~~r~Hkkdv~~~~WhP~~~~lftsgg--------------------------------------~Dgsvvh~~v~~~~p~  342 (464)
T KOG0284|consen  301 TYRGHKKDVTSLTWHPLNESLFTSGG--------------------------------------SDGSVVHWVVGLEEPL  342 (464)
T ss_pred             Hhhcchhhheeeccccccccceeecc--------------------------------------CCCceEEEeccccccc
Confidence            8999999999999999654 444444                                      3444444444422333


Q ss_pred             E-EEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCC
Q psy14511        399 E-ELKIHQERILSAVLSPDQTCVAAASADETISIWNCFP  436 (488)
Q Consensus       399 ~-~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~  436 (488)
                      . .-.+|...|++++|+|-|..|++|+.|.++++|.-..
T Consensus       343 ~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r~r  381 (464)
T KOG0284|consen  343 GEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTRNR  381 (464)
T ss_pred             cCCCcccccceeeeeccccceeEeecCCCcceeeeccCC
Confidence            3 2357999999999999999999999999999998653

>KOG0279|consensus

Probab=100.00  E-value=1.9e-36  Score=237.64  Aligned_cols=215  Identities=17%  Similarity=0.282  Sum_probs=182.3

Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCcc
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDY  317 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~  317 (488)
                      |...|..+..+++|++.+++ +.|+.+++||+.+++..+.+.+|...|.++++  |++.+++|+.|.+|++|+....  +
T Consensus        62 HsH~v~dv~~s~dg~~alS~-swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~--c  138 (315)
T KOG0279|consen   62 HSHFVSDVVLSSDGNFALSA-SWDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGV--C  138 (315)
T ss_pred             cceEecceEEccCCceEEec-cccceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeeccc--E
Confidence            88899999999999999999 99999999999999999999999999999999  7899999999999999999864  3


Q ss_pred             ceeeec--CCccEEEEEEccC--CcEEEEEe-cCeEEEEECCCCCCCccccee---e--eeecCCCCEEEEEccCCCCeE
Q psy14511        318 PTAITR--EGDVVCGLKWSPN--GRYLASGS-NNTVKIWDFRQLDAKRPLGLI---V--PKLKREGRELVTSHGKQDCSL  387 (488)
Q Consensus       318 ~~~~~~--~~~~i~~~~~s~~--~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~---~--~~~~~~~~~l~~~~g~~~~~i  387 (488)
                      ...+..  +.+.|.++.|+|+  ..+|++++ |+++++||+++.+....+...   +  .++||||...++  |+.||.+
T Consensus       139 k~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcas--Ggkdg~~  216 (315)
T KOG0279|consen  139 KYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCAS--GGKDGEA  216 (315)
T ss_pred             EEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccccccccEEEEEECCCCCEEec--CCCCceE
Confidence            333333  3789999999998  67899999 799999999998766655433   2  299999999999  9999999


Q ss_pred             EEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccccc-----cc-----cCCcceEEeecC
Q psy14511        388 KMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKA-----RQ-----VGSGSSLEFAIL  457 (488)
Q Consensus       388 ~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~~-----~~-----~~~v~~~~~s~~  457 (488)
                      .+||+..++.+..+. |...|.+++|+|+.-.|+.+. +-.|+|||++++......     +.     .-...+++|++|
T Consensus       217 ~LwdL~~~k~lysl~-a~~~v~sl~fspnrywL~~at-~~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws~d  294 (315)
T KOG0279|consen  217 MLWDLNEGKNLYSLE-AFDIVNSLCFSPNRYWLCAAT-ATSIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSAD  294 (315)
T ss_pred             EEEEccCCceeEecc-CCCeEeeEEecCCceeEeecc-CCceEEEeccchhhhhhccccccccccccCCcEEEEEEEcCC
Confidence            999999999988776 778899999999977766654 556999999998766221     11     222468999999


Q ss_pred             CCce
Q psy14511        458 KQPV  461 (488)
Q Consensus       458 ~~~~  461 (488)
                      |+.+
T Consensus       295 G~tL  298 (315)
T KOG0279|consen  295 GQTL  298 (315)
T ss_pred             CcEE
Confidence            9988

>KOG0645|consensus

Probab=100.00  E-value=1.5e-35  Score=231.65  Aligned_cols=285  Identities=21%  Similarity=0.362  Sum_probs=225.3

Q ss_pred             ceeecccCceEEEEEEccC-CcEEEEec-CCeEEEEeccccCcCCCcccc-cccccceeEEEEecCCCeEEeeeCCcccc
Q psy14511         29 PTAITREGDVVCGLKWSPN-GRYLASGS-NNTVKIWDFRQLDAKRPQVNN-QCHLSAVKAIAWCPWEPTLLATGGGICDQ  105 (488)
Q Consensus        29 ~~~~~~h~~~V~~l~~sp~-g~~las~~-d~~i~vwd~~~~~~~~~~~~~-~~h~~~v~~l~~~~~~~~l~~~~~~~~d~  105 (488)
                      .+.+++|.+.|..++|+|- |..||+++ |+.|++|+...+....+...+ .+|+..|++++|+|.|++|++++-   |.
T Consensus         7 ~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSF---D~   83 (312)
T KOG0645|consen    7 EQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASF---DA   83 (312)
T ss_pred             EEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeec---cc
Confidence            3567899999999999998 99999998 999999999854333333222 469999999999999986655554   99


Q ss_pred             eEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCC
Q psy14511        106 TVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAK  185 (488)
Q Consensus       106 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (488)
                      ++.||.-..++                                                                     
T Consensus        84 t~~Iw~k~~~e---------------------------------------------------------------------   94 (312)
T KOG0645|consen   84 TVVIWKKEDGE---------------------------------------------------------------------   94 (312)
T ss_pred             eEEEeecCCCc---------------------------------------------------------------------
Confidence            99999754332                                                                     


Q ss_pred             CceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCc
Q psy14511        186 PERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEY  265 (488)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~  265 (488)
                                                                  ...+..++| |...|.|++|+++|++||++ +.|..
T Consensus        95 --------------------------------------------fecv~~lEG-HEnEVK~Vaws~sG~~LATC-SRDKS  128 (312)
T KOG0645|consen   95 --------------------------------------------FECVATLEG-HENEVKCVAWSASGNYLATC-SRDKS  128 (312)
T ss_pred             --------------------------------------------eeEEeeeec-cccceeEEEEcCCCCEEEEe-eCCCe
Confidence                                                        122334455 99999999999999999999 99999


Q ss_pred             EEEEECCc---ceeeeeeccccccEEEEEecC--CEEEEeecCCeEEEEECcCCC--ccceeeecCCccEEEEEEccCCc
Q psy14511        266 IDLWHEQE---ERLIQKLRTHMHQVIAMCWNG--NLLSCGTIGGNILHYDVRTHS--DYPTAITREGDVVCGLKWSPNGR  338 (488)
Q Consensus       266 i~i~d~~~---~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~~i~~~~~s~~~~  338 (488)
                      |-+|.+..   .++...++.|...|..+.|.+  .+|++++.|.+|++|+-..+.  .+.+.+.+|...|.+++|+|.|.
T Consensus       129 VWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~  208 (312)
T KOG0645|consen  129 VWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGS  208 (312)
T ss_pred             EEEEEecCCCcEEEEeeeccccccccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCc
Confidence            99999874   367788999999999999965  899999999999999877322  57888999999999999999999


Q ss_pred             EEEEEec-CeEEEEECCCCCCCcc-cceeeeeecCCCCEEEEEccCCCCeEEEEeCCCc------cee-EEEeeccccEE
Q psy14511        339 YLASGSN-NTVKIWDFRQLDAKRP-LGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRL------HLI-EELKIHQERIL  409 (488)
Q Consensus       339 ~l~~~~d-~~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~------~~~-~~~~~~~~~v~  409 (488)
                      .|++++| ++++||.....-.... -......|.  ...+++  ++.|+.|++|.-...      +.+ ..-..|...|+
T Consensus       209 rl~s~sdD~tv~Iw~~~~~~~~~~sr~~Y~v~W~--~~~IaS--~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVN  284 (312)
T KOG0645|consen  209 RLVSCSDDGTVSIWRLYTDLSGMHSRALYDVPWD--NGVIAS--GGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVN  284 (312)
T ss_pred             eEEEecCCcceEeeeeccCcchhcccceEeeeec--ccceEe--ccCCCEEEEEEecCCCCCchHHHHHhhhcccccccc
Confidence            9999995 9999999653211111 111122444  556666  778999999976542      122 23356888999


Q ss_pred             EEEEcCC-CCEEEEEeCCCcEEEEecC
Q psy14511        410 SAVLSPD-QTCVAAASADETISIWNCF  435 (488)
Q Consensus       410 ~~~~s~~-~~~l~t~~~dg~v~iw~~~  435 (488)
                      +++|.|. .++|++++.||.|++|.+.
T Consensus       285 sV~w~p~~~~~L~s~~DDG~v~~W~l~  311 (312)
T KOG0645|consen  285 SVQWNPKVSNRLASGGDDGIVNFWELE  311 (312)
T ss_pred             eEEEcCCCCCceeecCCCceEEEEEec
Confidence            9999995 7799999999999999875

>KOG0285|consensus

Probab=100.00  E-value=1.8e-36  Score=245.76  Aligned_cols=281  Identities=20%  Similarity=0.327  Sum_probs=239.9

Q ss_pred             eeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEE
Q psy14511         30 TAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVR  108 (488)
Q Consensus        30 ~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~  108 (488)
                      +.+.+|.+.|.|+++.|...++++|+ |++|+|||+.+++   ...++.||-..|..+++++-..|+++++.   |+.|+
T Consensus       145 rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~---LkltltGhi~~vr~vavS~rHpYlFs~ge---dk~VK  218 (460)
T KOG0285|consen  145 RVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQ---LKLTLTGHIETVRGVAVSKRHPYLFSAGE---DKQVK  218 (460)
T ss_pred             hhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCe---EEEeecchhheeeeeeecccCceEEEecC---CCeeE
Confidence            45789999999999999999999999 9999999999854   44567899999999999999999999997   99999


Q ss_pred             EEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCce
Q psy14511        109 LWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPER  188 (488)
Q Consensus       109 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (488)
                      .||++..+.++..                                                                   
T Consensus       219 CwDLe~nkvIR~Y-------------------------------------------------------------------  231 (460)
T KOG0285|consen  219 CWDLEYNKVIRHY-------------------------------------------------------------------  231 (460)
T ss_pred             EEechhhhhHHHh-------------------------------------------------------------------
Confidence            9999877644322                                                                   


Q ss_pred             eecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEE
Q psy14511        189 ILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDL  268 (488)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i  268 (488)
                                                                      .+ |-..|.|++.+|.-..|+++ +.|.++++
T Consensus       232 ------------------------------------------------hG-HlS~V~~L~lhPTldvl~t~-grDst~Rv  261 (460)
T KOG0285|consen  232 ------------------------------------------------HG-HLSGVYCLDLHPTLDVLVTG-GRDSTIRV  261 (460)
T ss_pred             ------------------------------------------------cc-ccceeEEEeccccceeEEec-CCcceEEE
Confidence                                                            22 77789999999999999999 99999999


Q ss_pred             EECCcceeeeeeccccccEEEEEec--CCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEecC
Q psy14511        269 WHEQEERLIQKLRTHMHQVIAMCWN--GNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNN  346 (488)
Q Consensus       269 ~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~  346 (488)
                      ||+++...+..+.+|..+|..+.+.  +..+++|+.|++|++||++.++ ....+..|...+.+++.+|....+|+++-.
T Consensus       262 WDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~agk-t~~tlt~hkksvral~lhP~e~~fASas~d  340 (460)
T KOG0285|consen  262 WDIRTRASVHVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLRAGK-TMITLTHHKKSVRALCLHPKENLFASASPD  340 (460)
T ss_pred             eeecccceEEEecCCCCcceeEEeecCCCceEEecCCceEEEeeeccCc-eeEeeecccceeeEEecCCchhhhhccCCc
Confidence            9999999999999999999999995  7889999999999999999974 677888999999999999999999999988


Q ss_pred             eEEEEECCCCCCCccccee---eeeecCC-CCEEEEEccCCCCeEEEEeCCCcceeEEEee--------ccccEEEEEEc
Q psy14511        347 TVKIWDFRQLDAKRPLGLI---VPKLKRE-GRELVTSHGKQDCSLKMWEYPRLHLIEELKI--------HQERILSAVLS  414 (488)
Q Consensus       347 ~i~iwd~~~~~~~~~~~~~---~~~~~~~-~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~--------~~~~v~~~~~s  414 (488)
                      .|+-|++..++..+.+...   +.+.+-+ ...+++  |+++|.+.+||.+++-..+.++.        ....|.+.+|.
T Consensus       341 nik~w~~p~g~f~~nlsgh~~iintl~~nsD~v~~~--G~dng~~~fwdwksg~nyQ~~~t~vqpGSl~sEagI~as~fD  418 (460)
T KOG0285|consen  341 NIKQWKLPEGEFLQNLSGHNAIINTLSVNSDGVLVS--GGDNGSIMFWDWKSGHNYQRGQTIVQPGSLESEAGIFASCFD  418 (460)
T ss_pred             cceeccCCccchhhccccccceeeeeeeccCceEEE--cCCceEEEEEecCcCcccccccccccCCccccccceeEEeec
Confidence            9999999988665554332   3344433 334445  89999999999998865554421        24468999999


Q ss_pred             CCCCEEEEEeCCCcEEEEecCC
Q psy14511        415 PDQTCVAAASADETISIWNCFP  436 (488)
Q Consensus       415 ~~~~~l~t~~~dg~v~iw~~~~  436 (488)
                      ..|..|+||..|.+|++|.-..
T Consensus       419 ktg~rlit~eadKtIk~~keDe  440 (460)
T KOG0285|consen  419 KTGSRLITGEADKTIKMYKEDE  440 (460)
T ss_pred             ccCceEEeccCCcceEEEeccc
Confidence            9999999999999999998654

>KOG0266|consensus

Probab=100.00  E-value=7.2e-36  Score=274.68  Aligned_cols=279  Identities=25%  Similarity=0.482  Sum_probs=236.4

Q ss_pred             ccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEec
Q psy14511         34 REGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNS  112 (488)
Q Consensus        34 ~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~  112 (488)
                      .|...|.++.|+|+|++|++++ |+.+++|+..+.+. .....+.+|...|.+++|+|+++++++++.   |++|++||+
T Consensus       157 ~~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~-~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~---D~tiriwd~  232 (456)
T KOG0266|consen  157 HECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKS-NLLRELSGHTRGVSDVAFSPDGSYLLSGSD---DKTLRIWDL  232 (456)
T ss_pred             cccCceEEEEEcCCCCeEEEccCCCcEEEeecccccc-hhhccccccccceeeeEECCCCcEEEEecC---CceEEEeec
Confidence            3477899999999999999997 99999999966442 345556889999999999999997777776   999999998


Q ss_pred             CC-CeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeec
Q psy14511        113 MN-GKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILE  191 (488)
Q Consensus       113 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (488)
                      .. +..++.+                                                                      
T Consensus       233 ~~~~~~~~~l----------------------------------------------------------------------  242 (456)
T KOG0266|consen  233 KDDGRNLKTL----------------------------------------------------------------------  242 (456)
T ss_pred             cCCCeEEEEe----------------------------------------------------------------------
Confidence            33 3332222                                                                      


Q ss_pred             CCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEEC
Q psy14511        192 APSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHE  271 (488)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~  271 (488)
                                                                   .+ |...|++++|+|+++.++++ +.|++|++||+
T Consensus       243 ---------------------------------------------~g-H~~~v~~~~f~p~g~~i~Sg-s~D~tvriWd~  275 (456)
T KOG0266|consen  243 ---------------------------------------------KG-HSTYVTSVAFSPDGNLLVSG-SDDGTVRIWDV  275 (456)
T ss_pred             ---------------------------------------------cC-CCCceEEEEecCCCCEEEEe-cCCCcEEEEec
Confidence                                                         22 88899999999999888888 99999999999


Q ss_pred             CcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCc-cceeeecCCc--cEEEEEEccCCcEEEEEe-c
Q psy14511        272 QEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSD-YPTAITREGD--VVCGLKWSPNGRYLASGS-N  345 (488)
Q Consensus       272 ~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~--~i~~~~~s~~~~~l~~~~-d  345 (488)
                      +++++...+.+|...|.+++|  +++++++++.|+.|++||+.++.. +...+..+..  +++.+.|+|++++++++. |
T Consensus       276 ~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d  355 (456)
T KOG0266|consen  276 RTGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLD  355 (456)
T ss_pred             cCCeEEEeeeccCCceEEEEECCCCCEEEEcCCCccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCC
Confidence            999999999999999999999  799999999999999999998753 2344555444  599999999999999999 5


Q ss_pred             CeEEEEECCCCCCCccccee--------eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeec-cccEEEEEEcCC
Q psy14511        346 NTVKIWDFRQLDAKRPLGLI--------VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIH-QERILSAVLSPD  416 (488)
Q Consensus       346 ~~i~iwd~~~~~~~~~~~~~--------~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~-~~~v~~~~~s~~  416 (488)
                      +.+++||+............        ....++.++++++  |+.|+.|++||+.++..+..+.+| ...+..+.++|.
T Consensus       356 ~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s--g~~d~~v~~~~~~s~~~~~~l~~h~~~~~~~~~~~~~  433 (456)
T KOG0266|consen  356 RTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGGKLIYS--GSEDGSVYVWDSSSGGILQRLEGHSKAAVSDLSSHPT  433 (456)
T ss_pred             CeEEEEEccCCcceeeecccCCcceeEecccccCCCCeEEE--EeCCceEEEEeCCccchhhhhcCCCCCceeccccCCC
Confidence            89999999977554433222        1245788999999  899999999999999999999999 899999999999


Q ss_pred             CCEEEEEe--CCCcEEEEecC
Q psy14511        417 QTCVAAAS--ADETISIWNCF  435 (488)
Q Consensus       417 ~~~l~t~~--~dg~v~iw~~~  435 (488)
                      .+++++++  .|+.+++|..+
T Consensus       434 ~~~~~s~s~~~d~~~~~w~~~  454 (456)
T KOG0266|consen  434 ENLIASSSFEGDGLIRLWKYD  454 (456)
T ss_pred             cCeeeecCcCCCceEEEecCC
Confidence            99999998  78999999764

>KOG0281|consensus

Probab=100.00  E-value=1.9e-37  Score=250.71  Aligned_cols=275  Identities=17%  Similarity=0.338  Sum_probs=222.7

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSA   82 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~   82 (488)
                      |...+++|..|++|+|||.++-.++ ..+.||++.|.|+.|.  .+.|++|+ |.+|+|||+++++   ++.++.+|...
T Consensus       206 DD~kiVSGlrDnTikiWD~n~~~c~-~~L~GHtGSVLCLqyd--~rviisGSSDsTvrvWDv~tge---~l~tlihHcea  279 (499)
T KOG0281|consen  206 DDEKIVSGLRDNTIKIWDKNSLECL-KILTGHTGSVLCLQYD--ERVIVSGSSDSTVRVWDVNTGE---PLNTLIHHCEA  279 (499)
T ss_pred             cchhhhcccccCceEEeccccHHHH-HhhhcCCCcEEeeecc--ceEEEecCCCceEEEEeccCCc---hhhHHhhhcce
Confidence            6677888999999999998887754 6788999999888885  56888887 9999999998854   55567789999


Q ss_pred             eeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccc
Q psy14511         83 VKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQS  162 (488)
Q Consensus        83 v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (488)
                      |..+.|+.  .++++++.   |.++.+||+.....+..                                          
T Consensus       280 VLhlrf~n--g~mvtcSk---DrsiaVWdm~sps~it~------------------------------------------  312 (499)
T KOG0281|consen  280 VLHLRFSN--GYMVTCSK---DRSIAVWDMASPTDITL------------------------------------------  312 (499)
T ss_pred             eEEEEEeC--CEEEEecC---CceeEEEeccCchHHHH------------------------------------------
Confidence            99999974  35666655   99999999865431100                                          


Q ss_pred             cccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCC
Q psy14511        163 KRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNA  242 (488)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~  242 (488)
                                                                                            ...+.| |..
T Consensus       313 ----------------------------------------------------------------------rrVLvG-HrA  321 (499)
T KOG0281|consen  313 ----------------------------------------------------------------------RRVLVG-HRA  321 (499)
T ss_pred             ----------------------------------------------------------------------HHHHhh-hhh
Confidence                                                                                  001122 788


Q ss_pred             ceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCccceeee
Q psy14511        243 YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAIT  322 (488)
Q Consensus       243 ~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~  322 (488)
                      .|+.+.|+.  ++++++ +.|.+|++|++.+++.++++.+|...|.|+.+.++++++|+.|.+|++||+..+ .++..+.
T Consensus       322 aVNvVdfd~--kyIVsA-SgDRTikvW~~st~efvRtl~gHkRGIAClQYr~rlvVSGSSDntIRlwdi~~G-~cLRvLe  397 (499)
T KOG0281|consen  322 AVNVVDFDD--KYIVSA-SGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECG-ACLRVLE  397 (499)
T ss_pred             heeeecccc--ceEEEe-cCCceEEEEeccceeeehhhhcccccceehhccCeEEEecCCCceEEEEecccc-HHHHHHh
Confidence            899999864  588888 999999999999999999999999999999999999999999999999999986 5889999


Q ss_pred             cCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEE
Q psy14511        323 REGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEEL  401 (488)
Q Consensus       323 ~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~  401 (488)
                      +|+.-|.++.|  |.+.+++|+ ||+|++||+..+..++..                              .+.-++.++
T Consensus       398 GHEeLvRciRF--d~krIVSGaYDGkikvWdl~aaldpra~------------------------------~~~~Cl~~l  445 (499)
T KOG0281|consen  398 GHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAP------------------------------ASTLCLRTL  445 (499)
T ss_pred             chHHhhhheee--cCceeeeccccceEEEEecccccCCccc------------------------------ccchHHHhh
Confidence            99999999999  567888888 799999999876433211                              011244566


Q ss_pred             eeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcc
Q psy14511        402 KIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKK  440 (488)
Q Consensus       402 ~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~  440 (488)
                      ..|++.|..+.|  |...+++++.|.+|.|||+.++.+.
T Consensus       446 v~hsgRVFrLQF--D~fqIvsssHddtILiWdFl~~~~~  482 (499)
T KOG0281|consen  446 VEHSGRVFRLQF--DEFQIISSSHDDTILIWDFLNGPPS  482 (499)
T ss_pred             hhccceeEEEee--cceEEEeccCCCeEEEEEcCCCCcc
Confidence            679999999999  7789999999999999999887655

>KOG0263|consensus

Probab=100.00  E-value=2.2e-36  Score=270.26  Aligned_cols=283  Identities=20%  Similarity=0.376  Sum_probs=225.6

Q ss_pred             ccCCceEEEeecCCeEEEEEcccCc------------------------------ccceeecccCceEEEEEEccCCcEE
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTHS------------------------------DYPTAITREGDVVCGLKWSPNGRYL   51 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~~------------------------------~~~~~~~~h~~~V~~l~~sp~g~~l   51 (488)
                      +-|+.+||.|..|..|++|.+...+                              .....+.||.++|..+.|+|+.++|
T Consensus       387 SddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~GPVyg~sFsPd~rfL  466 (707)
T KOG0263|consen  387 SDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSGPVYGCSFSPDRRFL  466 (707)
T ss_pred             cCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCCceeeeeecccccce
Confidence            4578899999999999999987311                              0123467999999999999999999


Q ss_pred             EEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCcccc
Q psy14511         52 ASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQAND  130 (488)
Q Consensus        52 as~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~  130 (488)
                      ++++ |++|++|.+.+   ...+...+||..+|+++.|+|.|-|+++++.   |++.++|......+++.+.        
T Consensus       467 lScSED~svRLWsl~t---~s~~V~y~GH~~PVwdV~F~P~GyYFatas~---D~tArLWs~d~~~PlRifa--------  532 (707)
T KOG0263|consen  467 LSCSEDSSVRLWSLDT---WSCLVIYKGHLAPVWDVQFAPRGYYFATASH---DQTARLWSTDHNKPLRIFA--------  532 (707)
T ss_pred             eeccCCcceeeeeccc---ceeEEEecCCCcceeeEEecCCceEEEecCC---CceeeeeecccCCchhhhc--------
Confidence            9999 99999999988   5566778899999999999999966655544   9999999986644332221        


Q ss_pred             ccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCc
Q psy14511        131 ETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHD  210 (488)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (488)
                                                                                                      
T Consensus       533 --------------------------------------------------------------------------------  532 (707)
T KOG0263|consen  533 --------------------------------------------------------------------------------  532 (707)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEE
Q psy14511        211 TLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAM  290 (488)
Q Consensus       211 ~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~  290 (488)
                                                 + |...+.|+.|+|+..++++| +.|.++++||..++..++.+.+|.++|.++
T Consensus       533 ---------------------------g-hlsDV~cv~FHPNs~Y~aTG-SsD~tVRlWDv~~G~~VRiF~GH~~~V~al  583 (707)
T KOG0263|consen  533 ---------------------------G-HLSDVDCVSFHPNSNYVATG-SSDRTVRLWDVSTGNSVRIFTGHKGPVTAL  583 (707)
T ss_pred             ---------------------------c-cccccceEEECCcccccccC-CCCceEEEEEcCCCcEEEEecCCCCceEEE
Confidence                                       1 77789999999999999999 999999999999999999999999999999


Q ss_pred             Ee--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeee
Q psy14511        291 CW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVP  367 (488)
Q Consensus       291 ~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~  367 (488)
                      ++  +|++|++|+.||.|.+||+.++ ..+..+.+|.+.|.++.|+.+|..||+++ |++|++||+......-.....  
T Consensus       584 ~~Sp~Gr~LaSg~ed~~I~iWDl~~~-~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~~~~~~~~~~--  660 (707)
T KOG0263|consen  584 AFSPCGRYLASGDEDGLIKIWDLANG-SLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTKVIELLNLGHI--  660 (707)
T ss_pred             EEcCCCceEeecccCCcEEEEEcCCC-cchhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEchhhccccccccc--
Confidence            99  7999999999999999999986 57888889999999999999999999999 799999999865322000000  


Q ss_pred             eecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEE
Q psy14511        368 KLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAA  423 (488)
Q Consensus       368 ~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~  423 (488)
                        +           ..++.+.-=+-.+..++..+..-..+|..+.|..-+-.|++|
T Consensus       661 --~-----------~~~~~~~~~~~~~~~llgs~~tK~tpv~~l~FtrrNl~L~~g  703 (707)
T KOG0263|consen  661 --S-----------TSNSAITQENNASSLLLGSFYTKNTPVVGLHFTRRNLLLAVG  703 (707)
T ss_pred             --c-----------cccccccccCCCCcceeeeeeecCceEEEEEEeccceeEEec
Confidence              0           000000000002334566676677789999998776555554

>KOG1408|consensus

Probab=100.00  E-value=9.5e-35  Score=256.45  Aligned_cols=439  Identities=15%  Similarity=0.202  Sum_probs=294.6

Q ss_pred             cCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec---CCeEEEEeccccCcCCCcccccccccceeEEEEe
Q psy14511         13 IGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS---NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWC   89 (488)
Q Consensus        13 ~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~---d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~   89 (488)
                      ....|.+||++...+ .+.+..|..+++|++||++|+|+|+|.   ...++||++..   ...+.++..|.-.|+|++|+
T Consensus        56 AGCvVVlfn~~~~tQ-~hlvnssRk~~t~vAfS~~GryvatGEcG~~pa~kVw~la~---h~vVAEfvdHKY~vtcvaFs  131 (1080)
T KOG1408|consen   56 AGCVVVLFNVDSCTQ-SHLVNSSRKPLTCVAFSQNGRYVATGECGRTPASKVWSLAF---HGVVAEFVDHKYNVTCVAFS  131 (1080)
T ss_pred             cCcEEEEEcccccch-hheecccCcceeEEEEcCCCcEEEecccCCCccceeeeecc---ccchhhhhhccccceeeeec
Confidence            456889999988773 467788999999999999999999996   68999999987   34666788899999999999


Q ss_pred             cCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeee------------------
Q psy14511         90 PWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGF------------------  151 (488)
Q Consensus        90 ~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------  151 (488)
                      |.++|++++|+. .|-.|.+||++.......-+. +..+...+|+-+.......-.....-|                  
T Consensus       132 p~~kyvvSVGsQ-HDMIVnv~dWr~N~~~asnki-ss~Vsav~fsEdgSYfvT~gnrHvk~wyl~~~~KykdpiPl~gRs  209 (1080)
T KOG1408|consen  132 PGNKYVVSVGSQ-HDMIVNVNDWRVNSSGASNKI-SSVVSAVAFSEDGSYFVTSGNRHVKLWYLQIQSKYKDPIPLPGRS  209 (1080)
T ss_pred             CCCcEEEeeccc-cceEEEhhhhhhccccccccc-ceeEEEEEEccCCceeeeeeeeeEEEEEeeccccccCCccccchh
Confidence            999999999975 677888998764322111111 011111222211111100000000000                  


Q ss_pred             ------------------e--------c-cccceecc----------------------ccccccceeeec---------
Q psy14511        152 ------------------E--------I-DRKKVLNQ----------------------SKRTVSPTQFLR---------  173 (488)
Q Consensus       152 ------------------~--------~-~~~~~~~~----------------------~~~~~~~~~~~~---------  173 (488)
                                        .        + ..+.+..|                      +.+.+.+.....         
T Consensus       210 ~~lg~lr~n~f~avaCg~gicAestfait~qGhLvEFSsRRLLDKWVqcRTTnAnCIcVs~r~I~cgCa~g~vrlFnp~t  289 (1080)
T KOG1408|consen  210 YFLGNLRFNEFLAVACGVGICAESTFAITAQGHLVEFSSRRLLDKWVQCRTTNANCICVSSRLIACGCAKGMVRLFNPET  289 (1080)
T ss_pred             hhccccccchhhhhhhcCcccccceEEEecccceeeechhhhhhhhhhhhccccceeeeecceEEEeeccceeeecCcch
Confidence                              0        0 00001111                      111111100000         


Q ss_pred             -----cccc-------ccccccC-----------CCceee----------------------cCCCcc------ccceee
Q psy14511        174 -----TLGK-------LPRKVKA-----------KPERIL----------------------EAPSII------NDFYTS  202 (488)
Q Consensus       174 -----~~~~-------~~~~~~~-----------~~~~~~----------------------~~~~~~------~~~~~~  202 (488)
                           +++.       .......           .|..+.                      ...+..      ...+..
T Consensus       290 L~y~~Tlpr~halg~d~a~~~q~~~~~s~~~~a~fPD~IA~~Fdet~~klscVYndhSlYvWDvrD~~kvgk~~s~lyHS  369 (1080)
T KOG1408|consen  290 LDYAGTLPRSHALGSDTANLSQPEPKNSESSPAIFPDAIACQFDETTDKLSCVYNDHSLYVWDVRDVNKVGKCSSMLYHS  369 (1080)
T ss_pred             hhhccccccccccccchhhcccccccccccCcccCCceeEEEecCCCceEEEEEcCceEEEEeccccccccceeeeeecc
Confidence                 0000       0000000           000000                      000000      000111


Q ss_pred             eeee-----------------CCCcEEEEECCCeEEEEECCCCceEEE--------------------------------
Q psy14511        203 GLDW-----------------GYHDTLAVALDTSVYTWNTKTNKTQLL--------------------------------  233 (488)
Q Consensus       203 ~~~~-----------------~~~~~~~~~~d~~v~iw~~~~~~~~~~--------------------------------  233 (488)
                      ..-|                 .++.+++++.|++|++|+++....-.+                                
T Consensus       370 ~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fd  449 (1080)
T KOG1408|consen  370 ACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFD  449 (1080)
T ss_pred             ceeeeeccccccccCcccccCCccceeEecCCCcEEEeecccccccceeecccchhhhhcCccccCchhhhhhccCCccc
Confidence            1112                 135688889999999999886221110                                


Q ss_pred             ---EecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe-----cCCEEEEeecCCe
Q psy14511        234 ---VEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW-----NGNLLSCGTIGGN  305 (488)
Q Consensus       234 ---~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~-----~~~~l~~~~~dg~  305 (488)
                         ....+ ....+.+++.+|+|++|++| ...|.+++|++..-+....+++|...|.|+.+     ..++|++++.|+.
T Consensus       450 ka~~s~~d-~r~G~R~~~vSp~gqhLAsG-Dr~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRl  527 (1080)
T KOG1408|consen  450 KALVSTCD-SRFGFRALAVSPDGQHLASG-DRGGNLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRL  527 (1080)
T ss_pred             ccchhhcC-cccceEEEEECCCcceeccc-CccCceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCCce
Confidence               00011 34568999999999999999 99999999999998889999999999999999     2579999999999


Q ss_pred             EEEEECcCCCccceeeecCCccEEEEEEccCC--cEEEEEe-cCeEEEEECCCCCCCccccee----------eeeecCC
Q psy14511        306 ILHYDVRTHSDYPTAITREGDVVCGLKWSPNG--RYLASGS-NNTVKIWDFRQLDAKRPLGLI----------VPKLKRE  372 (488)
Q Consensus       306 i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~--~~l~~~~-d~~i~iwd~~~~~~~~~~~~~----------~~~~~~~  372 (488)
                      |++||....-.++..+.+|...|+++.|--.|  ..+++++ |..|.+--.++......+...          -.+..|.
T Consensus       528 IHV~Dv~rny~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~  607 (1080)
T KOG1408|consen  528 IHVYDVKRNYDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPT  607 (1080)
T ss_pred             EEEEecccccchhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCC
Confidence            99999988777889999999999999998877  5555555 655543222211111111111          1177888


Q ss_pred             CCEEEEEccCCCCeEEEEeCCCcceeEEEee---ccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcc-ccccccCC
Q psy14511        373 GRELVTSHGKQDCSLKMWEYPRLHLIEELKI---HQERILSAVLSPDQTCVAAASADETISIWNCFPRDKK-RKARQVGS  448 (488)
Q Consensus       373 ~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~-~~~~~~~~  448 (488)
                      .+++++  ++.|..|+|||+++++..+.+++   |.+....+...|.|.||||...|.++.++|+.+++.. ...+|+..
T Consensus       608 ~k~v~t--~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~GHsE~  685 (1080)
T KOG1408|consen  608 SKLVVT--VCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQMTGHSEA  685 (1080)
T ss_pred             cceEEE--EecccceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhhcCcchh
Confidence            999999  79999999999999999999875   5667888999999999999999999999999999998 56899999


Q ss_pred             cceEEeecCCCce
Q psy14511        449 GSSLEFAILKQPV  461 (488)
Q Consensus       449 v~~~~~s~~~~~~  461 (488)
                      |+.+.|.+|=+.+
T Consensus       686 VTG~kF~nDCkHl  698 (1080)
T KOG1408|consen  686 VTGVKFLNDCKHL  698 (1080)
T ss_pred             eeeeeecccchhh
Confidence            9999999987776

>KOG0263|consensus

Probab=100.00  E-value=1.9e-36  Score=270.63  Aligned_cols=246  Identities=24%  Similarity=0.383  Sum_probs=211.7

Q ss_pred             CceEEEEEEccCCcEEEEec-CCeEEEEeccccC----------------------------cCCCcccccccccceeEE
Q psy14511         36 GDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLD----------------------------AKRPQVNNQCHLSAVKAI   86 (488)
Q Consensus        36 ~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~----------------------------~~~~~~~~~~h~~~v~~l   86 (488)
                      ...++|..|++|+.+||.|- |..|++|.+...+                            ......++.+|+++|..+
T Consensus       378 ~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~GPVyg~  457 (707)
T KOG0263|consen  378 YQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSGPVYGC  457 (707)
T ss_pred             CCcceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCCceeee
Confidence            34699999999999999887 9999999987310                            011122367899999999


Q ss_pred             EEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccc
Q psy14511         87 AWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTV  166 (488)
Q Consensus        87 ~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (488)
                      .|+|+.++|++++.   |+++|+|.+.+..++..                                              
T Consensus       458 sFsPd~rfLlScSE---D~svRLWsl~t~s~~V~----------------------------------------------  488 (707)
T KOG0263|consen  458 SFSPDRRFLLSCSE---DSSVRLWSLDTWSCLVI----------------------------------------------  488 (707)
T ss_pred             eecccccceeeccC---CcceeeeecccceeEEE----------------------------------------------
Confidence            99999999888887   99999999987654322                                              


Q ss_pred             cceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEE
Q psy14511        167 SPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISC  246 (488)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~  246 (488)
                                                                                           ..+ |..+|.+
T Consensus       489 ---------------------------------------------------------------------y~G-H~~PVwd  498 (707)
T KOG0263|consen  489 ---------------------------------------------------------------------YKG-HLAPVWD  498 (707)
T ss_pred             ---------------------------------------------------------------------ecC-CCcceee
Confidence                                                                                 123 8889999


Q ss_pred             EEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecC
Q psy14511        247 VAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITRE  324 (488)
Q Consensus       247 ~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~  324 (488)
                      +.|+|.|-+++++ +.|++-++|......+.+.+.+|-..|.|+.|  +..++++|+.|.++++||..++ ..++.+.+|
T Consensus       499 V~F~P~GyYFata-s~D~tArLWs~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G-~~VRiF~GH  576 (707)
T KOG0263|consen  499 VQFAPRGYYFATA-SHDQTARLWSTDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTG-NSVRIFTGH  576 (707)
T ss_pred             EEecCCceEEEec-CCCceeeeeecccCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCC-cEEEEecCC
Confidence            9999999999999 99999999999999999999999999999999  7899999999999999999997 578999999


Q ss_pred             CccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeec
Q psy14511        325 GDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIH  404 (488)
Q Consensus       325 ~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~  404 (488)
                      .++|.+++|||+|++|++|+                                      .|+.|.+||+.+++++..+.+|
T Consensus       577 ~~~V~al~~Sp~Gr~LaSg~--------------------------------------ed~~I~iWDl~~~~~v~~l~~H  618 (707)
T KOG0263|consen  577 KGPVTALAFSPCGRYLASGD--------------------------------------EDGLIKIWDLANGSLVKQLKGH  618 (707)
T ss_pred             CCceEEEEEcCCCceEeecc--------------------------------------cCCcEEEEEcCCCcchhhhhcc
Confidence            99999999999999999875                                      4555666666667888899999


Q ss_pred             cccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcc
Q psy14511        405 QERILSAVLSPDQTCVAAASADETISIWNCFPRDKK  440 (488)
Q Consensus       405 ~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~  440 (488)
                      ++.|.++.||.||..||+|+.|.+|++||+......
T Consensus       619 t~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~~~~  654 (707)
T KOG0263|consen  619 TGTIYSLSFSRDGNVLASGGADNSVRLWDLTKVIEL  654 (707)
T ss_pred             cCceeEEEEecCCCEEEecCCCCeEEEEEchhhccc
Confidence            999999999999999999999999999999765433

>KOG0284|consensus

Probab=100.00  E-value=1.2e-36  Score=250.95  Aligned_cols=264  Identities=19%  Similarity=0.324  Sum_probs=222.4

Q ss_pred             CceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCC
Q psy14511         36 GDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMN  114 (488)
Q Consensus        36 ~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~  114 (488)
                      ..+|..+.|.|+|+.|++|+ .|.+.+|+..+.   .--..++.|..+|.++.|++++.++++...   +|.|++|+..-
T Consensus        96 kc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~f---nFEtilQaHDs~Vr~m~ws~~g~wmiSgD~---gG~iKyWqpnm  169 (464)
T KOG0284|consen   96 KCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSF---NFETILQAHDSPVRTMKWSHNGTWMISGDK---GGMIKYWQPNM  169 (464)
T ss_pred             ccceeeEEEcCCCceeEeecccccEEEecCcee---eHHHHhhhhcccceeEEEccCCCEEEEcCC---CceEEecccch
Confidence            45799999999999999998 899999997542   222236789999999999999988777665   99999999643


Q ss_pred             CeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCC
Q psy14511        115 GKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPS  194 (488)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (488)
                      ... .                                                                           
T Consensus       170 nnV-k---------------------------------------------------------------------------  173 (464)
T KOG0284|consen  170 NNV-K---------------------------------------------------------------------------  173 (464)
T ss_pred             hhh-H---------------------------------------------------------------------------
Confidence            220 0                                                                           


Q ss_pred             ccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcc
Q psy14511        195 IINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEE  274 (488)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~  274 (488)
                                                              ....+|...|++++|+|+...++++ +.||+|+|||....
T Consensus       174 ----------------------------------------~~~ahh~eaIRdlafSpnDskF~t~-SdDg~ikiWdf~~~  212 (464)
T KOG0284|consen  174 ----------------------------------------IIQAHHAEAIRDLAFSPNDSKFLTC-SDDGTIKIWDFRMP  212 (464)
T ss_pred             ----------------------------------------HhhHhhhhhhheeccCCCCceeEEe-cCCCeEEEEeccCC
Confidence                                                    0111156889999999999999999 99999999999999


Q ss_pred             eeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEE
Q psy14511        275 RLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWD  352 (488)
Q Consensus       275 ~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd  352 (488)
                      +....+.+|.-.|.+++|  ...++++++.|..|++||.+++ .++..+..|...|..+.|+|++++|++++        
T Consensus       213 kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg-~cl~tlh~HKntVl~~~f~~n~N~Llt~s--------  283 (464)
T KOG0284|consen  213 KEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSG-SCLATLHGHKNTVLAVKFNPNGNWLLTGS--------  283 (464)
T ss_pred             chhheeccCCCCcceeccCCccceeEEccCCceeEeecCCCc-chhhhhhhccceEEEEEEcCCCCeeEEcc--------
Confidence            998999999999999999  4679999999999999999996 58899999999999999999999999885        


Q ss_pred             CCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCC-CCEEEEEeCCCcEEE
Q psy14511        353 FRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPD-QTCVAAASADETISI  431 (488)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~t~~~dg~v~i  431 (488)
                                                    .|..++++|+++.+.++++++|...|+++.|+|- ..+|.+|+.||.|..
T Consensus       284 ------------------------------kD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh  333 (464)
T KOG0284|consen  284 ------------------------------KDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVH  333 (464)
T ss_pred             ------------------------------CCceEEEEehhHhHHHHHhhcchhhheeeccccccccceeeccCCCceEE
Confidence                                          3445555555666778899999999999999994 568888999999999


Q ss_pred             EecCCCCcc--ccccccCCcceEEeecCCCce
Q psy14511        432 WNCFPRDKK--RKARQVGSGSSLEFAILKQPV  461 (488)
Q Consensus       432 w~~~~~~~~--~~~~~~~~v~~~~~s~~~~~~  461 (488)
                      |.+...+++  ....|.+.|.+|+|+|-|..+
T Consensus       334 ~~v~~~~p~~~i~~AHd~~iwsl~~hPlGhil  365 (464)
T KOG0284|consen  334 WVVGLEEPLGEIPPAHDGEIWSLAYHPLGHIL  365 (464)
T ss_pred             EeccccccccCCCcccccceeeeeccccceeE
Confidence            999855554  557899999999999977766

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=100.00  E-value=3.4e-34  Score=253.48  Aligned_cols=278  Identities=26%  Similarity=0.461  Sum_probs=233.9

Q ss_pred             eeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEE
Q psy14511         30 TAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVR  108 (488)
Q Consensus        30 ~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~  108 (488)
                      ..+.+|.++|++++|+|++++|++++ |+.|++|++.+++   ....+..|...+..+.|+|+++.+++++.   |+.++
T Consensus         3 ~~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---~~~i~   76 (289)
T cd00200           3 RTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGE---LLRTLKGHTGPVRDVAASADGTYLASGSS---DKTIR   76 (289)
T ss_pred             hHhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCC---cEEEEecCCcceeEEEECCCCCEEEEEcC---CCeEE
Confidence            34678999999999999999999998 9999999998643   34456678899999999999987777776   99999


Q ss_pred             EEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCce
Q psy14511        109 LWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPER  188 (488)
Q Consensus       109 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (488)
                      +|++.+++....+                                                                   
T Consensus        77 i~~~~~~~~~~~~-------------------------------------------------------------------   89 (289)
T cd00200          77 LWDLETGECVRTL-------------------------------------------------------------------   89 (289)
T ss_pred             EEEcCcccceEEE-------------------------------------------------------------------
Confidence            9998765321111                                                                   


Q ss_pred             eecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEE
Q psy14511        189 ILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDL  268 (488)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i  268 (488)
                                                                    .  . +...+.++.|+|+++.++++ +.++.+.+
T Consensus        90 ----------------------------------------------~--~-~~~~i~~~~~~~~~~~~~~~-~~~~~i~~  119 (289)
T cd00200          90 ----------------------------------------------T--G-HTSYVSSVAFSPDGRILSSS-SRDKTIKV  119 (289)
T ss_pred             ----------------------------------------------e--c-cCCcEEEEEEcCCCCEEEEe-cCCCeEEE
Confidence                                                          1  1 66689999999998777777 77999999


Q ss_pred             EECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-c
Q psy14511        269 WHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-N  345 (488)
Q Consensus       269 ~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d  345 (488)
                      ||+.+++....+..|...+.++.+  ++.++++++.++.+++||++.. .....+..|...+.+++|+|+++.+++++ +
T Consensus       120 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~  198 (289)
T cd00200         120 WDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTG-KCVATLTGHTGEVNSVAFSPDGEKLLSSSSD  198 (289)
T ss_pred             EECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEcccc-ccceeEecCccccceEEECCCcCEEEEecCC
Confidence            999988888888889999999999  4678888877999999999875 45667778888999999999998888888 6


Q ss_pred             CeEEEEECCCCCCCccccee-----eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEE
Q psy14511        346 NTVKIWDFRQLDAKRPLGLI-----VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCV  420 (488)
Q Consensus       346 ~~i~iwd~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l  420 (488)
                      +.+++||++..+....+...     ...|+|++.++++  ++.++.+++||+.+++.+..+..|...|.+++|+|++++|
T Consensus       199 ~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l  276 (289)
T cd00200         199 GTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLAS--GSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRL  276 (289)
T ss_pred             CcEEEEECCCCceecchhhcCCceEEEEEcCCCcEEEE--EcCCCcEEEEEcCCceeEEEccccCCcEEEEEECCCCCEE
Confidence            99999999876554444211     2288999888877  5679999999999999999999999999999999999999


Q ss_pred             EEEeCCCcEEEEe
Q psy14511        421 AAASADETISIWN  433 (488)
Q Consensus       421 ~t~~~dg~v~iw~  433 (488)
                      ++++.||.+++|+
T Consensus       277 ~~~~~d~~i~iw~  289 (289)
T cd00200         277 ASGSADGTIRIWD  289 (289)
T ss_pred             EEecCCCeEEecC
Confidence            9999999999996

>KOG0293|consensus

Probab=100.00  E-value=5.6e-36  Score=247.44  Aligned_cols=274  Identities=18%  Similarity=0.336  Sum_probs=218.9

Q ss_pred             CccCCceEEEeecCCeEEEEEcccCcc--cceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCccccc
Q psy14511          1 MCWNGNLLSCGTIGGNILHYDVRTHSD--YPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQ   77 (488)
Q Consensus         1 ~~~dg~~la~g~~dg~i~iwd~~~~~~--~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~   77 (488)
                      |+.||+|||+++.|.+..||++.....  +..++.+|..+|..+.||||.++|++++ |..+.+||+.+++.....  ..
T Consensus       232 FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~y--~~  309 (519)
T KOG0293|consen  232 FSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHLY--PS  309 (519)
T ss_pred             EcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccCCcchhhhhc--cc
Confidence            456999999999999999999875443  4567899999999999999999999998 888999999998755433  23


Q ss_pred             ccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccc
Q psy14511         78 CHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKK  157 (488)
Q Consensus        78 ~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (488)
                      +|...+.+++|.|||..+++.+.   |+++..||++. .......+...                               
T Consensus       310 ~~~~S~~sc~W~pDg~~~V~Gs~---dr~i~~wdlDg-n~~~~W~gvr~-------------------------------  354 (519)
T KOG0293|consen  310 GLGFSVSSCAWCPDGFRFVTGSP---DRTIIMWDLDG-NILGNWEGVRD-------------------------------  354 (519)
T ss_pred             CcCCCcceeEEccCCceeEecCC---CCcEEEecCCc-chhhccccccc-------------------------------
Confidence            46689999999999988666555   99999999853 32222221100                               


Q ss_pred             eeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecC
Q psy14511        158 VLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYP  237 (488)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~  237 (488)
                                                             ....-.++..++..+++.+.|..+++++.++.......+  
T Consensus       355 ---------------------------------------~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~lis--  393 (519)
T KOG0293|consen  355 ---------------------------------------PKVHDLAITYDGKYVLLVTVDKKIRLYNREARVDRGLIS--  393 (519)
T ss_pred             ---------------------------------------ceeEEEEEcCCCcEEEEEecccceeeechhhhhhhcccc--
Confidence                                                   000111133345678888999999999998876655544  


Q ss_pred             CCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccE--EEEEe---cCCEEEEeecCCeEEEEECc
Q psy14511        238 TYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQV--IAMCW---NGNLLSCGTIGGNILHYDVR  312 (488)
Q Consensus       238 ~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v--~~~~~---~~~~l~~~~~dg~i~i~d~~  312 (488)
                        ...+|++++.+.+++++++. -.+..+++||++..+.++.+.+|...-  ..-+|   +..++++|++|+.|+||+..
T Consensus       394 --e~~~its~~iS~d~k~~Lvn-L~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~  470 (519)
T KOG0293|consen  394 --EEQPITSFSISKDGKLALVN-LQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRI  470 (519)
T ss_pred             --ccCceeEEEEcCCCcEEEEE-cccCeeEEeecchhhHHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEcc
Confidence              56689999999999999998 999999999999988899998887643  33445   56899999999999999999


Q ss_pred             CCCccceeeecCCccEEEEEEccCC-cEEEEEec-CeEEEEECCCC
Q psy14511        313 THSDYPTAITREGDVVCGLKWSPNG-RYLASGSN-NTVKIWDFRQL  356 (488)
Q Consensus       313 ~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~d-~~i~iwd~~~~  356 (488)
                      ++ .++..+.+|...|++++|+|.. .++|+++| |+|+||-....
T Consensus       471 sg-kll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~~~  515 (519)
T KOG0293|consen  471 SG-KLLAVLSGHSKTVNCVSWNPADPEMFASASDDGTIRIWGPSDN  515 (519)
T ss_pred             CC-ceeEeecCCcceeeEEecCCCCHHHhhccCCCCeEEEecCCcc
Confidence            86 5899999999999999999955 68899985 99999987643

>KOG0295|consensus

Probab=100.00  E-value=1.6e-35  Score=240.78  Aligned_cols=267  Identities=18%  Similarity=0.342  Sum_probs=229.4

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSA   82 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~   82 (488)
                      +-.++++++.|++|++||..+++. ...++||.+.|..++|+..|++||+++ |-.+++||..+.  .+++..+.+|...
T Consensus       119 ~~~~v~~as~d~tikv~D~~tg~~-e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~~--~~c~ks~~gh~h~  195 (406)
T KOG0295|consen  119 SEALVVSASEDATIKVFDTETGEL-ERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDFDTF--FRCIKSLIGHEHG  195 (406)
T ss_pred             CceEEEEecCCceEEEEEccchhh-hhhhhccccceeEEEEecCccEEEecCCccchhheeHHHH--HHHHHHhcCcccc
Confidence            455788889999999999999995 678999999999999999999999998 888999999753  4566778899999


Q ss_pred             eeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccc
Q psy14511         83 VKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQS  162 (488)
Q Consensus        83 v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (488)
                      |.++.|-|.|.++++++.   |.+|+.|++.+|.++.++.++..-+..+....                           
T Consensus       196 vS~V~f~P~gd~ilS~sr---D~tik~We~~tg~cv~t~~~h~ewvr~v~v~~---------------------------  245 (406)
T KOG0295|consen  196 VSSVFFLPLGDHILSCSR---DNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQ---------------------------  245 (406)
T ss_pred             eeeEEEEecCCeeeeccc---ccceeEEecccceeEEeccCchHhEEEEEecC---------------------------
Confidence            999999999999888887   99999999999999999988754222111111                           


Q ss_pred             cccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcE-EEEECCCeEEEEECCCCceEEEEecCCCCC
Q psy14511        163 KRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDT-LAVALDTSVYTWNTKTNKTQLLVEYPTYDN  241 (488)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~  241 (488)
                                                                   ++.+ .+++.|.+|++|-+.++++...+..   |.
T Consensus       246 ---------------------------------------------DGti~As~s~dqtl~vW~~~t~~~k~~lR~---hE  277 (406)
T KOG0295|consen  246 ---------------------------------------------DGTIIASCSNDQTLRVWVVATKQCKAELRE---HE  277 (406)
T ss_pred             ---------------------------------------------CeeEEEecCCCceEEEEEeccchhhhhhhc---cc
Confidence                                                         2233 4445899999999999987766665   88


Q ss_pred             CceEEEEEcCCC---------------CeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEec--CCEEEEeecCC
Q psy14511        242 AYISCVAWKPRT---------------TDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWN--GNLLSCGTIGG  304 (488)
Q Consensus       242 ~~i~~~~~~~~~---------------~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg  304 (488)
                      .++.|++|.|..               ..+.++ +.|++|++||+.++.++.++.+|...|..++|.  |++|+++..|+
T Consensus       278 h~vEci~wap~~~~~~i~~at~~~~~~~~l~s~-SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDk  356 (406)
T KOG0295|consen  278 HPVECIAWAPESSYPSISEATGSTNGGQVLGSG-SRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYILSCADDK  356 (406)
T ss_pred             cceEEEEecccccCcchhhccCCCCCccEEEee-cccceEEEEeccCCeEEEEEecccceeeeeEEcCCCeEEEEEecCC
Confidence            899999997732               356666 999999999999999999999999999999994  99999999999


Q ss_pred             eEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEEC
Q psy14511        305 NILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDF  353 (488)
Q Consensus       305 ~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~  353 (488)
                      ++++||+++. ++...+..|..-++++.|+.+..++++|+ |..+++|..
T Consensus       357 tlrvwdl~~~-~cmk~~~ah~hfvt~lDfh~~~p~VvTGsVdqt~KvwEc  405 (406)
T KOG0295|consen  357 TLRVWDLKNL-QCMKTLEAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC  405 (406)
T ss_pred             cEEEEEeccc-eeeeccCCCcceeEEEecCCCCceEEeccccceeeeeec
Confidence            9999999986 57888889999999999999999999999 799999975

>KOG0645|consensus

Probab=100.00  E-value=2.4e-34  Score=224.88  Aligned_cols=267  Identities=17%  Similarity=0.306  Sum_probs=211.7

Q ss_pred             CceEEEeecCCeEEEEEcccCc---ccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccc
Q psy14511          5 GNLLSCGTIGGNILHYDVRTHS---DYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHL   80 (488)
Q Consensus         5 g~~la~g~~dg~i~iwd~~~~~---~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~   80 (488)
                      |..||+++.|..|+||+...+.   +....-.+|+..|+.++|+|.|++||+|+ |.++.||.-..+ ...++..+.||.
T Consensus        27 g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~-efecv~~lEGHE  105 (312)
T KOG0645|consen   27 GVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDATVVIWKKEDG-EFECVATLEGHE  105 (312)
T ss_pred             ceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccceEEEeecCCC-ceeEEeeeeccc
Confidence            6699999999999999998522   22223358999999999999999999999 999999987744 366788899999


Q ss_pred             cceeEEEEecCCCeEEeeeCCcccceEEEEecCCCee---eeeeecCCCccccccccccccccceeEEEEEeeeeccccc
Q psy14511         81 SAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKE---KCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKK  157 (488)
Q Consensus        81 ~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (488)
                      ..|.+++|+++|.+|++++.   |+.+-||.+..+..   ...+..|.+.+                             
T Consensus       106 nEVK~Vaws~sG~~LATCSR---DKSVWiWe~deddEfec~aVL~~HtqDV-----------------------------  153 (312)
T KOG0645|consen  106 NEVKCVAWSASGNYLATCSR---DKSVWIWEIDEDDEFECIAVLQEHTQDV-----------------------------  153 (312)
T ss_pred             cceeEEEEcCCCCEEEEeeC---CCeEEEEEecCCCcEEEEeeeccccccc-----------------------------
Confidence            99999999999988777766   99999999875432   23333333322                             


Q ss_pred             eeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCC--CcEEEEECCCeEEEEECC-CCceEEEE
Q psy14511        158 VLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGY--HDTLAVALDTSVYTWNTK-TNKTQLLV  234 (488)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~v~iw~~~-~~~~~~~~  234 (488)
                                                                  ..+.|.|  +.+++++.|++|++|.-. .+......
T Consensus       154 --------------------------------------------K~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~  189 (312)
T KOG0645|consen  154 --------------------------------------------KHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQ  189 (312)
T ss_pred             --------------------------------------------cEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEE
Confidence                                                        2244444  678888899999999987 66666666


Q ss_pred             ecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCC
Q psy14511        235 EYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTH  314 (488)
Q Consensus       235 ~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~  314 (488)
                      ++.+ |...+.+++|+|.|..|+++ +.|++++||...+.    .-..|..+++.+.|+...|++++.|+.|++|.-...
T Consensus       190 tl~g-~~~TVW~~~F~~~G~rl~s~-sdD~tv~Iw~~~~~----~~~~~sr~~Y~v~W~~~~IaS~ggD~~i~lf~~s~~  263 (312)
T KOG0645|consen  190 TLDG-HENTVWSLAFDNIGSRLVSC-SDDGTVSIWRLYTD----LSGMHSRALYDVPWDNGVIASGGGDDAIRLFKESDS  263 (312)
T ss_pred             EecC-ccceEEEEEecCCCceEEEe-cCCcceEeeeeccC----cchhcccceEeeeecccceEeccCCCEEEEEEecCC
Confidence            7777 88899999999999999999 99999999986521    112477899999999889999999999999987642


Q ss_pred             C------ccceeeecCCccEEEEEEccC-CcEEEEEec-CeEEEEECC
Q psy14511        315 S------DYPTAITREGDVVCGLKWSPN-GRYLASGSN-NTVKIWDFR  354 (488)
Q Consensus       315 ~------~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~d-~~i~iwd~~  354 (488)
                      .      .....-..|...|++++|+|. ..+|++++| |.+++|.+.
T Consensus       264 ~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~  311 (312)
T KOG0645|consen  264 PDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWELE  311 (312)
T ss_pred             CCCchHHHHHhhhcccccccceEEEcCCCCCceeecCCCceEEEEEec
Confidence            1      122244568889999999994 678888885 999999864

>PLN00181 protein SPA1-RELATED; Provisional

Probab=100.00  E-value=7.2e-34  Score=281.60  Aligned_cols=311  Identities=15%  Similarity=0.242  Sum_probs=233.8

Q ss_pred             CCeEEEEEcccCcccc----eeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCc----C-CCcccccccccce
Q psy14511         14 GGNILHYDVRTHSDYP----TAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDA----K-RPQVNNQCHLSAV   83 (488)
Q Consensus        14 dg~i~iwd~~~~~~~~----~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~----~-~~~~~~~~h~~~v   83 (488)
                      +|.+++|+..+.....    ..+..|.+.|.+++|+|+|++||+|+ |+.|+||+..+...    . .+...+. +...|
T Consensus       457 ~gl~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v  535 (793)
T PLN00181        457 EGLCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SRSKL  535 (793)
T ss_pred             hhhhhhhcccceEEEEeeccccccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEec-ccCce
Confidence            5667888877544221    12345899999999999999999998 99999999864211    0 1122222 34679


Q ss_pred             eEEEEecC-CCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccc
Q psy14511         84 KAIAWCPW-EPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQS  162 (488)
Q Consensus        84 ~~l~~~~~-~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (488)
                      .+++|++. +.++++++.   |++|++||+.+++.+..+..+...+..                                
T Consensus       536 ~~l~~~~~~~~~las~~~---Dg~v~lWd~~~~~~~~~~~~H~~~V~~--------------------------------  580 (793)
T PLN00181        536 SGICWNSYIKSQVASSNF---EGVVQVWDVARSQLVTEMKEHEKRVWS--------------------------------  580 (793)
T ss_pred             eeEEeccCCCCEEEEEeC---CCeEEEEECCCCeEEEEecCCCCCEEE--------------------------------
Confidence            99999885 445555444   999999999988877776665433222                                


Q ss_pred             cccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC---CCcEEEEECCCeEEEEECCCCceEEEEecCCC
Q psy14511        163 KRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG---YHDTLAVALDTSVYTWNTKTNKTQLLVEYPTY  239 (488)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~  239 (488)
                                                               +.|+   +..+++++.|+.|++||+.++.....+.    
T Consensus       581 -----------------------------------------l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~----  615 (793)
T PLN00181        581 -----------------------------------------IDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIK----  615 (793)
T ss_pred             -----------------------------------------EEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEe----
Confidence                                                     3332   2357788899999999999888766654    


Q ss_pred             CCCceEEEEEc-CCCCeEEEEeCCCCcEEEEECCcce-eeeeeccccccEEEEEe-cCCEEEEeecCCeEEEEECcCC--
Q psy14511        240 DNAYISCVAWK-PRTTDLAVTNTCTEYIDLWHEQEER-LIQKLRTHMHQVIAMCW-NGNLLSCGTIGGNILHYDVRTH--  314 (488)
Q Consensus       240 ~~~~i~~~~~~-~~~~~l~~~~~~~~~i~i~d~~~~~-~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~--  314 (488)
                      ....+.++.|+ +++..++++ +.|+.|++||++..+ .+..+.+|...|.++.| ++..+++++.|+.|++||++..  
T Consensus       616 ~~~~v~~v~~~~~~g~~latg-s~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~~~~~lvs~s~D~~ikiWd~~~~~~  694 (793)
T PLN00181        616 TKANICCVQFPSESGRSLAFG-SADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMSIS  694 (793)
T ss_pred             cCCCeEEEEEeCCCCCEEEEE-eCCCeEEEEECCCCCccceEecCCCCCEEEEEEeCCCEEEEEECCCEEEEEeCCCCcc
Confidence            34578999995 568888888 999999999998765 46677899999999999 7899999999999999999753  


Q ss_pred             ---CccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEE
Q psy14511        315 ---SDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMW  390 (488)
Q Consensus       315 ---~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~  390 (488)
                         ..++..+.+|...+..++|+|++.+|++++ |+.+++|+......                            +..|
T Consensus       695 ~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~~----------------------------~~s~  746 (793)
T PLN00181        695 GINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMP----------------------------VLSY  746 (793)
T ss_pred             ccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCCCc----------------------------eEEE
Confidence               135667889999999999999999999999 69999999764310                            1111


Q ss_pred             eCCCccee--EEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEec
Q psy14511        391 EYPRLHLI--EELKIHQERILSAVLSPDQTCVAAASADETISIWNC  434 (488)
Q Consensus       391 d~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~  434 (488)
                      .......+  .....|...|.+++|+|++..|++|+.||.|++|++
T Consensus       747 ~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~~dG~I~i~~~  792 (793)
T PLN00181        747 KFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAANSTGNIKILEM  792 (793)
T ss_pred             ecccCCcccccccCCCCcEEEEEEEcCCCCeEEEecCCCcEEEEec
Confidence            11111111  122346678999999999999999999999999996

>KOG0278|consensus

Probab=100.00  E-value=9.2e-36  Score=230.05  Aligned_cols=285  Identities=20%  Similarity=0.279  Sum_probs=238.4

Q ss_pred             cceeecccCceEEEEEEcc---CCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcc
Q psy14511         28 YPTAITREGDVVCGLKWSP---NGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGIC  103 (488)
Q Consensus        28 ~~~~~~~h~~~V~~l~~sp---~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~  103 (488)
                      .+.+..+|+.+|..++|||   +|-+|++++ |+.=.+-+-+++   .-+.++.+|.+.|++.....+. ..+++++.  
T Consensus         6 ~pl~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tg---dwigtfeghkgavw~~~l~~na-~~aasaaa--   79 (334)
T KOG0278|consen    6 TPLTCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTG---DWIGTFEGHKGAVWSATLNKNA-TRAASAAA--   79 (334)
T ss_pred             CceEEcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCC---CcEEeeeccCcceeeeecCchh-hhhhhhcc--
Confidence            4566789999999999986   899999999 887766665553   3566789999999999998776 44555554  


Q ss_pred             cceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeeccccccccccc
Q psy14511        104 DQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVK  183 (488)
Q Consensus       104 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (488)
                      |-+-++||.-+|..+..+                                                              
T Consensus        80 dftakvw~a~tgdelhsf--------------------------------------------------------------   97 (334)
T KOG0278|consen   80 DFTAKVWDAVTGDELHSF--------------------------------------------------------------   97 (334)
T ss_pred             cchhhhhhhhhhhhhhhh--------------------------------------------------------------
Confidence            999999998877643222                                                              


Q ss_pred             CCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCC
Q psy14511        184 AKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCT  263 (488)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~  263 (488)
                                                                         +    |...|.+++|+.|.++|+++ +.+
T Consensus        98 ---------------------------------------------------~----hkhivk~~af~~ds~~lltg-g~e  121 (334)
T KOG0278|consen   98 ---------------------------------------------------E----HKHIVKAVAFSQDSNYLLTG-GQE  121 (334)
T ss_pred             ---------------------------------------------------h----hhheeeeEEecccchhhhcc-chH
Confidence                                                               1    66779999999999999999 999


Q ss_pred             CcEEEEECCcc-eeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEE
Q psy14511        264 EYIDLWHEQEE-RLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYL  340 (488)
Q Consensus       264 ~~i~i~d~~~~-~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l  340 (488)
                      ..+++||++.. .+...+.+|.+.|..+.|  ..+.+++.+.|+.|++||.+++.. ++.+. .+.+|+++.++++|++|
T Consensus       122 kllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~-v~sL~-~~s~VtSlEvs~dG~il  199 (334)
T KOG0278|consen  122 KLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTE-VQSLE-FNSPVTSLEVSQDGRIL  199 (334)
T ss_pred             HHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcE-EEEEe-cCCCCcceeeccCCCEE
Confidence            99999999875 356778899999999999  678888889999999999999753 33332 34469999999999999


Q ss_pred             EEEecCeEEEEECCCCCCCcccceeee----eecCCCCEEEEEccCCCCeEEEEeCCCcceeEEE-eeccccEEEEEEcC
Q psy14511        341 ASGSNNTVKIWDFRQLDAKRPLGLIVP----KLKREGRELVTSHGKQDCSLKMWEYPRLHLIEEL-KIHQERILSAVLSP  415 (488)
Q Consensus       341 ~~~~d~~i~iwd~~~~~~~~~~~~~~~----~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~-~~~~~~v~~~~~s~  415 (488)
                      .++..+.|.+||..+.+..+......+    ..+|+...+++  |+.|..++.||+.+++.+..+ ++|.++|.++.|+|
T Consensus       200 Tia~gssV~Fwdaksf~~lKs~k~P~nV~SASL~P~k~~fVa--Gged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSP  277 (334)
T KOG0278|consen  200 TIAYGSSVKFWDAKSFGLLKSYKMPCNVESASLHPKKEFFVA--GGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSP  277 (334)
T ss_pred             EEecCceeEEeccccccceeeccCccccccccccCCCceEEe--cCcceEEEEEeccCCceeeecccCCCCceEEEEECC
Confidence            888789999999999877665544433    88899988877  999999999999999999886 89999999999999


Q ss_pred             CCCEEEEEeCCCcEEEEecCCCCcc
Q psy14511        416 DQTCVAAASADETISIWNCFPRDKK  440 (488)
Q Consensus       416 ~~~~l~t~~~dg~v~iw~~~~~~~~  440 (488)
                      ||...|+||.||+|++|.+..++..
T Consensus       278 dGE~yAsGSEDGTirlWQt~~~~~~  302 (334)
T KOG0278|consen  278 DGELYASGSEDGTIRLWQTTPGKTY  302 (334)
T ss_pred             CCceeeccCCCceEEEEEecCCCch
Confidence            9999999999999999999877654

>KOG1539|consensus

Probab=100.00  E-value=1.4e-33  Score=253.28  Aligned_cols=377  Identities=19%  Similarity=0.221  Sum_probs=285.8

Q ss_pred             eEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeE
Q psy14511          7 LLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKA   85 (488)
Q Consensus         7 ~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~   85 (488)
                      -++.|+.+|.+.||++++++.+ ..++++...|+++.=+|-=..+|.|. +|+|.+++++.++   .+.+++...+.|++
T Consensus       174 KIvvGs~~G~lql~Nvrt~K~v-~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dk---il~sFk~d~g~Vts  249 (910)
T KOG1539|consen  174 KIVVGSSQGRLQLWNVRTGKVV-YTFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDK---ILMSFKQDWGRVTS  249 (910)
T ss_pred             eEEEeecCCcEEEEEeccCcEE-EEecccccceeEeccCCcceEEEEeccCceEEEEEcccCc---EEEEEEccccceeE
Confidence            4678999999999999999955 66889999999999999989999998 9999999998744   44455544599999


Q ss_pred             EEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeec-CCCccccccccccccccceeEEEEEeeeeccccceeccccc
Q psy14511         86 IAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKT-DSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKR  164 (488)
Q Consensus        86 l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (488)
                      ++|..||+.+++++..  .|.+.+||++..+....+.. +...+....+.+                             
T Consensus       250 lSFrtDG~p~las~~~--~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~-----------------------------  298 (910)
T KOG1539|consen  250 LSFRTDGNPLLASGRS--NGDMAFWDLEKKKLINVTRNAHYGSVTGATFLP-----------------------------  298 (910)
T ss_pred             EEeccCCCeeEEeccC--CceEEEEEcCCCeeeeeeeccccCCcccceecC-----------------------------
Confidence            9999999999999984  79999999988776655542 212211111111                             


Q ss_pred             cccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCce-EEEEecCCCCCCc
Q psy14511        165 TVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKT-QLLVEYPTYDNAY  243 (488)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~-~~~~~~~~~~~~~  243 (488)
                                                                ...-+++++.|+.+++|=.+++.- .+.+...+.|..+
T Consensus       299 ------------------------------------------~epVl~ta~~DnSlk~~vfD~~dg~pR~LR~R~GHs~P  336 (910)
T KOG1539|consen  299 ------------------------------------------GEPVLVTAGADNSLKVWVFDSGDGVPRLLRSRGGHSAP  336 (910)
T ss_pred             ------------------------------------------CCceEeeccCCCceeEEEeeCCCCcchheeeccCCCCC
Confidence                                                      113456667788777765554322 2233333338888


Q ss_pred             eEEEEEc-CCCCeEEEEeCCCCcEEEEECC--------------------------------------------------
Q psy14511        244 ISCVAWK-PRTTDLAVTNTCTEYIDLWHEQ--------------------------------------------------  272 (488)
Q Consensus       244 i~~~~~~-~~~~~l~~~~~~~~~i~i~d~~--------------------------------------------------  272 (488)
                      ..|+.|. .++..+..+ +.|++++.+++.                                                  
T Consensus       337 p~~irfy~~~g~~ilsa-~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~  415 (910)
T KOG1539|consen  337 PSCIRFYGSQGHFILSA-KQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVI  415 (910)
T ss_pred             chheeeeccCcEEEEec-ccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhhhccee
Confidence            8888887 556666666 777777666542                                                  


Q ss_pred             ---------------ccee-eeeec-----cccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceee---ecCCc
Q psy14511        273 ---------------EERL-IQKLR-----THMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAI---TREGD  326 (488)
Q Consensus       273 ---------------~~~~-~~~~~-----~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~---~~~~~  326 (488)
                                     .... ...+.     .....+.+++.  .|++.+.|+..|.|.+|+++.+- ....+   ..|..
T Consensus       416 ~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi-~r~sf~~~~ah~~  494 (910)
T KOG1539|consen  416 TAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGI-HRKSFGDSPAHKG  494 (910)
T ss_pred             EEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEcccCe-eecccccCccccC
Confidence                           1000 00000     01133444444  68999999999999999999864 33333   58999


Q ss_pred             cEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeee----eecCCCCEEEEEccCCCCeEEEEeCCCcceeEEE
Q psy14511        327 VVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVP----KLKREGRELVTSHGKQDCSLKMWEYPRLHLIEEL  401 (488)
Q Consensus       327 ~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~----~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~  401 (488)
                      +|++++...-++.+++++ +|.+++||..+......++.-..    .++.....+++  +.+|-.|.++|..+.+.++.+
T Consensus       495 ~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~--~~ddf~I~vvD~~t~kvvR~f  572 (910)
T KOG1539|consen  495 EVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAI--ALDDFSIRVVDVVTRKVVREF  572 (910)
T ss_pred             ceeEEEecCCCceEEEccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhh--hcCceeEEEEEchhhhhhHHh
Confidence            999999998888888888 79999999998764444333222    55556666676  688999999999999999999


Q ss_pred             eeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccccccccCCcceEEeecCCCceEEE
Q psy14511        402 KIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKARQVGSGSSLEFAILKQPVSLT  464 (488)
Q Consensus       402 ~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~  464 (488)
                      .+|.+.|++++|||||++|++++.|++|++||+.++..+.......+..++.|||.|..++..
T Consensus       573 ~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~vd~~~~sls~SPngD~LAT~  635 (910)
T KOG1539|consen  573 WGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLLVDSPCTSLSFSPNGDFLATV  635 (910)
T ss_pred             hccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEecCCcceeeEECCCCCEEEEE
Confidence            999999999999999999999999999999999999999888889999999999999988553

>KOG0316|consensus

Probab=100.00  E-value=4.2e-34  Score=218.92  Aligned_cols=278  Identities=18%  Similarity=0.266  Sum_probs=234.5

Q ss_pred             CcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeee
Q psy14511         72 PQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGF  151 (488)
Q Consensus        72 ~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (488)
                      ....+.+|.++|.++.|+-||+|.+++|+   |+++++|+...|.++++..++...+.....+.                
T Consensus         9 r~~~l~~~qgaV~avryN~dGnY~ltcGs---drtvrLWNp~rg~liktYsghG~EVlD~~~s~----------------   69 (307)
T KOG0316|consen    9 RLSILDCAQGAVRAVRYNVDGNYCLTCGS---DRTVRLWNPLRGALIKTYSGHGHEVLDAALSS----------------   69 (307)
T ss_pred             hceeecccccceEEEEEccCCCEEEEcCC---CceEEeecccccceeeeecCCCceeeeccccc----------------
Confidence            34457789999999999999999999998   99999999999999999998866555444333                


Q ss_pred             eccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceE
Q psy14511        152 EIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQ  231 (488)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~  231 (488)
                                                                             ++.++.+++.|..+.+||+++|+..
T Consensus        70 -------------------------------------------------------Dnskf~s~GgDk~v~vwDV~TGkv~   94 (307)
T KOG0316|consen   70 -------------------------------------------------------DNSKFASCGGDKAVQVWDVNTGKVD   94 (307)
T ss_pred             -------------------------------------------------------cccccccCCCCceEEEEEcccCeee
Confidence                                                                   3357888899999999999999988


Q ss_pred             EEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCc--ceeeeeeccccccEEEEEecCCEEEEeecCCeEEEE
Q psy14511        232 LLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE--ERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHY  309 (488)
Q Consensus       232 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~--~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~  309 (488)
                      ..+..   |...|+.++|+.+...++++ +.|.++++||-+.  .++++.+......|.++...+..|++|+.||+++.|
T Consensus        95 Rr~rg---H~aqVNtV~fNeesSVv~Sg-sfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~~heIvaGS~DGtvRty  170 (307)
T KOG0316|consen   95 RRFRG---HLAQVNTVRFNEESSVVASG-SFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVAEHEIVAGSVDGTVRTY  170 (307)
T ss_pred             eeccc---ccceeeEEEecCcceEEEec-cccceeEEEEcccCCCCccchhhhhcCceeEEEecccEEEeeccCCcEEEE
Confidence            77665   99999999999999888888 9999999999875  578888888899999999999999999999999999


Q ss_pred             ECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeee-------eecCCCCEEEEEcc
Q psy14511        310 DVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVP-------KLKREGRELVTSHG  381 (488)
Q Consensus       310 d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~g  381 (488)
                      |++.+. ...  .....+|+++.|++|++....++ |+++++.|-.+++..+....+.+       +++.....++.  |
T Consensus       171 diR~G~-l~s--Dy~g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~eykldc~l~qsdthV~s--g  245 (307)
T KOG0316|consen  171 DIRKGT-LSS--DYFGHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEYKLDCCLNQSDTHVFS--G  245 (307)
T ss_pred             Eeecce-eeh--hhcCCcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcccccceeeeeeeecccceeEEe--c
Confidence            999874 222  23345699999999999888888 89999999999977666554433       66666677777  9


Q ss_pred             CCCCeEEEEeCCCcceeEEEeecccc-EEEEEEcCCCCEEEEEeCCCcEEEEe
Q psy14511        382 KQDCSLKMWEYPRLHLIEELKIHQER-ILSAVLSPDQTCVAAASADETISIWN  433 (488)
Q Consensus       382 ~~~~~i~i~d~~~~~~~~~~~~~~~~-v~~~~~s~~~~~l~t~~~dg~v~iw~  433 (488)
                      ++||.+++||+.+...+..+..+... |.+++++|.-..|+++..- .+..|-
T Consensus       246 SEDG~Vy~wdLvd~~~~sk~~~~~~v~v~dl~~hp~~~~f~~A~~~-~~~~~~  297 (307)
T KOG0316|consen  246 SEDGKVYFWDLVDETQISKLSVVSTVIVTDLSCHPTMDDFITATGH-GDLFWY  297 (307)
T ss_pred             cCCceEEEEEeccceeeeeeccCCceeEEeeecccCccceeEecCC-ceecee
Confidence            99999999999999999999988887 8999999988777777644 455554

>KOG0296|consensus

Probab=100.00  E-value=1.1e-33  Score=230.39  Aligned_cols=305  Identities=19%  Similarity=0.247  Sum_probs=245.0

Q ss_pred             cCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCccccccccc
Q psy14511          3 WNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLS   81 (488)
Q Consensus         3 ~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~   81 (488)
                      ++.+++|+|+.|..-.||+..++. ....+.+|.+.|+++.||.||.|||+|+ +|.|+||+..++.....+.   ...+
T Consensus        74 P~~~l~aTGGgDD~AflW~~~~ge-~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~~---~e~~  149 (399)
T KOG0296|consen   74 PNNNLVATGGGDDLAFLWDISTGE-FAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKLD---QEVE  149 (399)
T ss_pred             CCCceEEecCCCceEEEEEccCCc-ceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCceEEEee---cccC
Confidence            478999999999999999999998 5577999999999999999999999999 9999999999866554432   3456


Q ss_pred             ceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecc
Q psy14511         82 AVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQ  161 (488)
Q Consensus        82 ~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (488)
                      .+.-+.|+|.+..|++.+.   ||.+.+|.+.++...+.+.++..+..+-.+.++                         
T Consensus       150 dieWl~WHp~a~illAG~~---DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pd-------------------------  201 (399)
T KOG0296|consen  150 DIEWLKWHPRAHILLAGST---DGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPD-------------------------  201 (399)
T ss_pred             ceEEEEecccccEEEeecC---CCcEEEEECCCcceeeEecCCCCCcccccccCC-------------------------
Confidence            7888999998876665554   999999999988777777777665554444433                         


Q ss_pred             ccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCC
Q psy14511        162 SKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDN  241 (488)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~  241 (488)
                                                                    +.+++++..||+|++|+..++++.......  ..
T Consensus       202 ----------------------------------------------GKr~~tgy~dgti~~Wn~ktg~p~~~~~~~--e~  233 (399)
T KOG0296|consen  202 ----------------------------------------------GKRILTGYDDGTIIVWNPKTGQPLHKITQA--EG  233 (399)
T ss_pred             ----------------------------------------------CceEEEEecCceEEEEecCCCceeEEeccc--cc
Confidence                                                          367888889999999999999887766543  34


Q ss_pred             CceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeec--------cccccEEEEEe-----cCCEEEEeecCCeEEE
Q psy14511        242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLR--------THMHQVIAMCW-----NGNLLSCGTIGGNILH  308 (488)
Q Consensus       242 ~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~--------~~~~~v~~~~~-----~~~~l~~~~~dg~i~i  308 (488)
                      .+..++.++..+..++.+ +.++.+++-+..+++.+....        .+...+.++.+     .=.+.|+|+.||+|.|
T Consensus       234 ~~~~~~~~~~~~~~~~~g-~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~i  312 (399)
T KOG0296|consen  234 LELPCISLNLAGSTLTKG-NSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAI  312 (399)
T ss_pred             CcCCccccccccceeEec-cCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccccceEEE
Confidence            567789999888888888 999999999988888877665        23444444444     3468899999999999


Q ss_pred             EECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCccccee-----eeeecCCCCEEEEEccC
Q psy14511        309 YDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLI-----VPKLKREGRELVTSHGK  382 (488)
Q Consensus       309 ~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~g~  382 (488)
                      ||+...  .++..-.|..+|..+.|-+ ..+|++++ +|.|+.||.+++.....+..+     .-+++|+.+++++  ++
T Consensus       313 yD~a~~--~~R~~c~he~~V~~l~w~~-t~~l~t~c~~g~v~~wDaRtG~l~~~y~GH~~~Il~f~ls~~~~~vvT--~s  387 (399)
T KOG0296|consen  313 YDLAAS--TLRHICEHEDGVTKLKWLN-TDYLLTACANGKVRQWDARTGQLKFTYTGHQMGILDFALSPQKRLVVT--VS  387 (399)
T ss_pred             Eecccc--hhheeccCCCceEEEEEcC-cchheeeccCceEEeeeccccceEEEEecCchheeEEEEcCCCcEEEE--ec
Confidence            999874  4666777888899999999 55666666 899999999999665544433     2288999999999  78


Q ss_pred             CCCeEEEEeCC
Q psy14511        383 QDCSLKMWEYP  393 (488)
Q Consensus       383 ~~~~i~i~d~~  393 (488)
                      .|++.+||+.+
T Consensus       388 ~D~~a~VF~v~  398 (399)
T KOG0296|consen  388 DDNTALVFEVP  398 (399)
T ss_pred             CCCeEEEEecC
Confidence            89999999865

>KOG0292|consensus

Probab=100.00  E-value=7e-33  Score=250.29  Aligned_cols=340  Identities=16%  Similarity=0.261  Sum_probs=274.2

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSA   82 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~   82 (488)
                      ..-+++++-..|.|++||..-+..+ ..+..|.++|..++|+|.+.++++|+ |..|+||+.++   .+++.++.||-.-
T Consensus        20 ~rPwILtslHsG~IQlWDYRM~tli-~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~---rrclftL~GHlDY   95 (1202)
T KOG0292|consen   20 KRPWILTSLHSGVIQLWDYRMGTLI-DRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKT---RRCLFTLLGHLDY   95 (1202)
T ss_pred             CCCEEEEeecCceeeeehhhhhhHH-hhhhccCCccceeeecCCCCeEEecCCccEEEEEeccc---ceehhhhccccce
Confidence            4567889999999999999888754 66889999999999999999999999 89999999987   6788889999999


Q ss_pred             eeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccc
Q psy14511         83 VKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQS  162 (488)
Q Consensus        83 v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (488)
                      |..+.|++.-+.+++++.   |.+|+||++.+++++..+.+|.+-+.+..|.|.                          
T Consensus        96 VRt~~FHheyPWIlSASD---DQTIrIWNwqsr~~iavltGHnHYVMcAqFhpt--------------------------  146 (1202)
T KOG0292|consen   96 VRTVFFHHEYPWILSASD---DQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPT--------------------------  146 (1202)
T ss_pred             eEEeeccCCCceEEEccC---CCeEEEEeccCCceEEEEecCceEEEeeccCCc--------------------------
Confidence            999999999999998887   999999999999999999999775555544442                          


Q ss_pred             cccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCc-------------
Q psy14511        163 KRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNK-------------  229 (488)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~-------------  229 (488)
                                                                   .+.+++++.|.+|++||+..-+             
T Consensus       147 ---------------------------------------------EDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~  181 (1202)
T KOG0292|consen  147 ---------------------------------------------EDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQM  181 (1202)
T ss_pred             ---------------------------------------------cceEEEecccceEEEEeecchhccCCCCCCchhhh
Confidence                                                         2567888899999999986321             


Q ss_pred             --------------eEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcce--eeeeeccccccEEEEEec
Q psy14511        230 --------------TQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEER--LIQKLRTHMHQVIAMCWN  293 (488)
Q Consensus       230 --------------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~  293 (488)
                                    .+....++| |...|+-++|+|.-..+++| +.|..|++|.+...+  .+.+..+|.++|.++-|+
T Consensus       182 ~~~~~~~dLfg~~DaVVK~VLEG-HDRGVNwaAfhpTlpliVSG-~DDRqVKlWrmnetKaWEvDtcrgH~nnVssvlfh  259 (1202)
T KOG0292|consen  182 RGQQGNSDLFGQTDAVVKHVLEG-HDRGVNWAAFHPTLPLIVSG-ADDRQVKLWRMNETKAWEVDTCRGHYNNVSSVLFH  259 (1202)
T ss_pred             hccccchhhcCCcCeeeeeeecc-cccccceEEecCCcceEEec-CCcceeeEEEeccccceeehhhhcccCCcceEEec
Confidence                          112234456 89999999999999999988 999999999987644  355678999999999996


Q ss_pred             C--CEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccceeeeeecC
Q psy14511        294 G--NLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKR  371 (488)
Q Consensus       294 ~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~  371 (488)
                      +  +++++.++|+.|++||+... ..++.+...++..+.++-+|..+++|.|-|+.+.+|-++...         +++.-
T Consensus       260 p~q~lIlSnsEDksirVwDm~kR-t~v~tfrrendRFW~laahP~lNLfAAgHDsGm~VFkleREr---------pa~~v  329 (1202)
T KOG0292|consen  260 PHQDLILSNSEDKSIRVWDMTKR-TSVQTFRRENDRFWILAAHPELNLFAAGHDSGMIVFKLERER---------PAYAV  329 (1202)
T ss_pred             CccceeEecCCCccEEEEecccc-cceeeeeccCCeEEEEEecCCcceeeeecCCceEEEEEcccC---------ceEEE
Confidence            5  89999999999999999874 578888888889999999999999999999888888776431         23344


Q ss_pred             CCCEEEEEccCCCCeEEEEeCCCcc--eeEEEeec---cccEEEEEEcCCCCEEEEE-eCC-CcEEEEecCC
Q psy14511        372 EGRELVTSHGKQDCSLKMWEYPRLH--LIEELKIH---QERILSAVLSPDQTCVAAA-SAD-ETISIWNCFP  436 (488)
Q Consensus       372 ~~~~l~~~~g~~~~~i~i~d~~~~~--~~~~~~~~---~~~v~~~~~s~~~~~l~t~-~~d-g~v~iw~~~~  436 (488)
                      ++..|...   .|..|+-+|+.+.+  .+..++..   ..++.++.++|....+..+ ..| |.-.++.+..
T Consensus       330 ~~n~LfYv---kd~~i~~~d~~t~~d~~v~~lr~~g~~~~~~~smsYNpae~~vlics~~~n~~y~L~~ipk  398 (1202)
T KOG0292|consen  330 NGNGLFYV---KDRFIRSYDLRTQKDTAVASLRRPGTLWQPPRSLSYNPAENAVLICSNLDNGEYELVQIPK  398 (1202)
T ss_pred             cCCEEEEE---ccceEEeeeccccccceeEeccCCCcccCCcceeeeccccCeEEEEeccCCCeEEEEEecC
Confidence            45555552   38999999998754  33444433   3678999999976544444 333 5555666654

>KOG0265|consensus

Probab=100.00  E-value=1.6e-33  Score=223.57  Aligned_cols=266  Identities=15%  Similarity=0.290  Sum_probs=222.4

Q ss_pred             ccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccc
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHL   80 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~   80 (488)
                      .+||.+||+|+.|..|.+|++.....-...+++|.++|..+.|.+|++.|++++ |.+|+.||+++++.   +...++|.
T Consensus        56 ~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~---~rk~k~h~  132 (338)
T KOG0265|consen   56 HPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETGKR---IRKHKGHT  132 (338)
T ss_pred             CCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEeccccee---eehhcccc
Confidence            459999999999999999998776655667889999999999999999999998 99999999999664   44567899


Q ss_pred             cceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceec
Q psy14511         81 SAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLN  160 (488)
Q Consensus        81 ~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (488)
                      .-|+++.-+.-|..++.+++.  |+++++||+++...++.+...                                    
T Consensus       133 ~~vNs~~p~rrg~~lv~Sgsd--D~t~kl~D~R~k~~~~t~~~k------------------------------------  174 (338)
T KOG0265|consen  133 SFVNSLDPSRRGPQLVCSGSD--DGTLKLWDIRKKEAIKTFENK------------------------------------  174 (338)
T ss_pred             ceeeecCccccCCeEEEecCC--CceEEEEeecccchhhccccc------------------------------------
Confidence            999999977778889998885  999999999977765544322                                    


Q ss_pred             cccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC--CCcEEEEECCCeEEEEECCCCceEEEEecCC
Q psy14511        161 QSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG--YHDTLAVALDTSVYTWNTKTNKTQLLVEYPT  238 (488)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~  238 (488)
                                                            +.+.++.|.  .+++++++-|+.|++||++.+....+...  
T Consensus       175 --------------------------------------yqltAv~f~d~s~qv~sggIdn~ikvWd~r~~d~~~~lsG--  214 (338)
T KOG0265|consen  175 --------------------------------------YQLTAVGFKDTSDQVISGGIDNDIKVWDLRKNDGLYTLSG--  214 (338)
T ss_pred             --------------------------------------eeEEEEEecccccceeeccccCceeeeccccCcceEEeec--
Confidence                                                  122334443  47899999999999999998887766654  


Q ss_pred             CCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCc----ceeeeeeccccc----cEEEEEe--cCCEEEEeecCCeEEE
Q psy14511        239 YDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE----ERLIQKLRTHMH----QVIAMCW--NGNLLSCGTIGGNILH  308 (488)
Q Consensus       239 ~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~----~~~~~~~~~~~~----~v~~~~~--~~~~l~~~~~dg~i~i  308 (488)
                       |..+|+.+..+|+|.++.+- +.|.++++||++.    .+++..+.+|..    .....+|  +++.+.+|+.|+.+++
T Consensus       215 -h~DtIt~lsls~~gs~llsn-sMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp~~~~i~ags~dr~vyv  292 (338)
T KOG0265|consen  215 -HADTITGLSLSRYGSFLLSN-SMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSPNGTKITAGSADRFVYV  292 (338)
T ss_pred             -ccCceeeEEeccCCCccccc-cccceEEEEEecccCCCCceEEEeecchhhhhhhcceeeccCCCCccccccccceEEE
Confidence             99999999999999999999 9999999999875    345777766533    3345556  7899999999999999


Q ss_pred             EECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEE
Q psy14511        309 YDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIW  351 (488)
Q Consensus       309 ~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iw  351 (488)
                      ||.... ..+..+.+|.+.|++++|+|...+|.+++ |.+|.+=
T Consensus       293 wd~~~r-~~lyklpGh~gsvn~~~Fhp~e~iils~~sdk~i~lg  335 (338)
T KOG0265|consen  293 WDTTSR-RILYKLPGHYGSVNEVDFHPTEPIILSCSSDKTIYLG  335 (338)
T ss_pred             eecccc-cEEEEcCCcceeEEEeeecCCCcEEEEeccCceeEee
Confidence            999874 58889999999999999999999999988 7887753

>KOG0266|consensus

Probab=100.00  E-value=1.2e-33  Score=260.03  Aligned_cols=275  Identities=21%  Similarity=0.379  Sum_probs=227.0

Q ss_pred             CccCCceEEEeecCCeEEEEEcccCc-ccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccc
Q psy14511          1 MCWNGNLLSCGTIGGNILHYDVRTHS-DYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQC   78 (488)
Q Consensus         1 ~~~dg~~la~g~~dg~i~iwd~~~~~-~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~   78 (488)
                      ++.||+++++++.++.+++|+..+.+ .....+.+|...|.+++|+|++++|++++ |++|+|||+..  ....+.++.+
T Consensus       167 fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~--~~~~~~~l~g  244 (456)
T KOG0266|consen  167 FSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKD--DGRNLKTLKG  244 (456)
T ss_pred             EcCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCceEEEeeccC--CCeEEEEecC
Confidence            35699999999999999999996665 23345589999999999999999999999 99999999943  2345667889


Q ss_pred             cccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccce
Q psy14511         79 HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKV  158 (488)
Q Consensus        79 h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (488)
                      |...|++++|+|+++ ++++|+.  |++|++||+.++++...+..+...+..+.+.++                      
T Consensus       245 H~~~v~~~~f~p~g~-~i~Sgs~--D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d----------------------  299 (456)
T KOG0266|consen  245 HSTYVTSVAFSPDGN-LLVSGSD--DGTVRIWDVRTGECVRKLKGHSDGISGLAFSPD----------------------  299 (456)
T ss_pred             CCCceEEEEecCCCC-EEEEecC--CCcEEEEeccCCeEEEeeeccCCceEEEEECCC----------------------
Confidence            999999999999995 4555553  999999999999999999998765554444332                      


Q ss_pred             eccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCce--EEEEec
Q psy14511        159 LNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKT--QLLVEY  236 (488)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~--~~~~~~  236 (488)
                                                                       +..+++++.|+.|++||+.++..  ...+..
T Consensus       300 -------------------------------------------------~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~  330 (456)
T KOG0266|consen  300 -------------------------------------------------GNLLVSASYDGTIRVWDLETGSKLCLKLLSG  330 (456)
T ss_pred             -------------------------------------------------CCEEEEcCCCccEEEEECCCCceeeeecccC
Confidence                                                             35677777899999999999984  333333


Q ss_pred             CCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe-----cCCEEEEeecCCeEEEEEC
Q psy14511        237 PTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW-----NGNLLSCGTIGGNILHYDV  311 (488)
Q Consensus       237 ~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~-----~~~~l~~~~~dg~i~i~d~  311 (488)
                      ..... +++++.|+|++.+++++ +.|+.+++||+..+..+..+.+|...+.++.-     .+.++++|+.|+.|++||+
T Consensus       331 ~~~~~-~~~~~~fsp~~~~ll~~-~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~~v~~~~~  408 (456)
T KOG0266|consen  331 AENSA-PVTSVQFSPNGKYLLSA-SLDRTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGGKLIYSGSEDGSVYVWDS  408 (456)
T ss_pred             CCCCC-ceeEEEECCCCcEEEEe-cCCCeEEEEEccCCcceeeecccCCcceeEecccccCCCCeEEEEeCCceEEEEeC
Confidence            22122 69999999999999999 99999999999999999999998886433321     6899999999999999999


Q ss_pred             cCCCccceeeecC-CccEEEEEEccCCcEEEEEe---cCeEEEEECC
Q psy14511        312 RTHSDYPTAITRE-GDVVCGLKWSPNGRYLASGS---NNTVKIWDFR  354 (488)
Q Consensus       312 ~~~~~~~~~~~~~-~~~i~~~~~s~~~~~l~~~~---d~~i~iwd~~  354 (488)
                      .+. ..+..+.+| ...+..+.++|...++++++   |+.+++|...
T Consensus       409 ~s~-~~~~~l~~h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~~~  454 (456)
T KOG0266|consen  409 SSG-GILQRLEGHSKAAVSDLSSHPTENLIASSSFEGDGLIRLWKYD  454 (456)
T ss_pred             Ccc-chhhhhcCCCCCceeccccCCCcCeeeecCcCCCceEEEecCC
Confidence            984 577888888 88899999999999999987   5889999754

>KOG0285|consensus

Probab=100.00  E-value=1.1e-33  Score=229.82  Aligned_cols=269  Identities=19%  Similarity=0.329  Sum_probs=228.1

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSA   82 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~   82 (488)
                      -..++++|+.|++|.|||+.+++ +...+.||-..|..+++|+-..||++++ |+.|+.||++.   .+.+..+.||-+.
T Consensus       162 ~n~wf~tgs~DrtikIwDlatg~-LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~---nkvIR~YhGHlS~  237 (460)
T KOG0285|consen  162 GNEWFATGSADRTIKIWDLATGQ-LKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEY---NKVIRHYHGHLSG  237 (460)
T ss_pred             CceeEEecCCCceeEEEEcccCe-EEEeecchhheeeeeeecccCceEEEecCCCeeEEEechh---hhhHHHhccccce
Confidence            36799999999999999999998 5678999999999999999999999999 99999999987   4455667899999


Q ss_pred             eeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccc
Q psy14511         83 VKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQS  162 (488)
Q Consensus        83 v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (488)
                      |.+++..|.-..|++++.   |.++++||+++...+..+.++..++..+.+.+                           
T Consensus       238 V~~L~lhPTldvl~t~gr---Dst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~---------------------------  287 (460)
T KOG0285|consen  238 VYCLDLHPTLDVLVTGGR---DSTIRVWDIRTRASVHVLSGHTNPVASVMCQP---------------------------  287 (460)
T ss_pred             eEEEeccccceeEEecCC---cceEEEeeecccceEEEecCCCCcceeEEeec---------------------------
Confidence            999999998877777776   99999999999999988888866555444322                           


Q ss_pred             cccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCC
Q psy14511        163 KRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNA  242 (488)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~  242 (488)
                                                                  -+.++++++.|++|++||+..++......-   |..
T Consensus       288 --------------------------------------------~dpqvit~S~D~tvrlWDl~agkt~~tlt~---hkk  320 (460)
T KOG0285|consen  288 --------------------------------------------TDPQVITGSHDSTVRLWDLRAGKTMITLTH---HKK  320 (460)
T ss_pred             --------------------------------------------CCCceEEecCCceEEEeeeccCceeEeeec---ccc
Confidence                                                        246899999999999999999998776665   889


Q ss_pred             ceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe-cCCEEEEeecCCeEEEEECcCCCcccee-
Q psy14511        243 YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW-NGNLLSCGTIGGNILHYDVRTHSDYPTA-  320 (488)
Q Consensus       243 ~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~-  320 (488)
                      .+.+++.+|....++++ +. ..++-|++..+..+..+.+|...+.+++. +..++++|+.+|.+.+||.+++...... 
T Consensus       321 svral~lhP~e~~fASa-s~-dnik~w~~p~g~f~~nlsgh~~iintl~~nsD~v~~~G~dng~~~fwdwksg~nyQ~~~  398 (460)
T KOG0285|consen  321 SVRALCLHPKENLFASA-SP-DNIKQWKLPEGEFLQNLSGHNAIINTLSVNSDGVLVSGGDNGSIMFWDWKSGHNYQRGQ  398 (460)
T ss_pred             eeeEEecCCchhhhhcc-CC-ccceeccCCccchhhccccccceeeeeeeccCceEEEcCCceEEEEEecCcCccccccc
Confidence            99999999998887777 44 46999999999999999999999999999 5789999999999999999986532222 


Q ss_pred             -ee-----cCCccEEEEEEccCCcEEEEEe-cCeEEEEECCC
Q psy14511        321 -IT-----REGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQ  355 (488)
Q Consensus       321 -~~-----~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~  355 (488)
                       ..     ..+..|.+.+|...|..|++|. |.+|++|.-..
T Consensus       399 t~vqpGSl~sEagI~as~fDktg~rlit~eadKtIk~~keDe  440 (460)
T KOG0285|consen  399 TIVQPGSLESEAGIFASCFDKTGSRLITGEADKTIKMYKEDE  440 (460)
T ss_pred             ccccCCccccccceeEEeecccCceEEeccCCcceEEEeccc
Confidence             11     1345688899999999999988 79999997554

>KOG0643|consensus

Probab=100.00  E-value=2e-33  Score=219.25  Aligned_cols=284  Identities=19%  Similarity=0.260  Sum_probs=232.9

Q ss_pred             eeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEE
Q psy14511         30 TAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVR  108 (488)
Q Consensus        30 ~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~  108 (488)
                      -.++||..+++-+.++.+|.+|.+++ |.+..||-...++   .+.++.+|++.|+++...-+.+.+++.+.   |.+++
T Consensus         4 i~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGe---rlGty~GHtGavW~~Did~~s~~liTGSA---D~t~k   77 (327)
T KOG0643|consen    4 ILLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGE---RLGTYDGHTGAVWCCDIDWDSKHLITGSA---DQTAK   77 (327)
T ss_pred             cccccCccccceEEecCCCcEEEEecCCCCceEEEecCCc---eeeeecCCCceEEEEEecCCcceeeeccc---cceeE
Confidence            45789999999999999999999999 9999999876544   56678999999999999999987766665   99999


Q ss_pred             EEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCce
Q psy14511        109 LWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPER  188 (488)
Q Consensus       109 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (488)
                      +||+++|+++..++                                                                  
T Consensus        78 LWDv~tGk~la~~k------------------------------------------------------------------   91 (327)
T KOG0643|consen   78 LWDVETGKQLATWK------------------------------------------------------------------   91 (327)
T ss_pred             EEEcCCCcEEEEee------------------------------------------------------------------
Confidence            99999998654432                                                                  


Q ss_pred             eecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEe----CCCC
Q psy14511        189 ILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTN----TCTE  264 (488)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~----~~~~  264 (488)
                                                                         ...++..+.|+++|++++++.    +..+
T Consensus        92 ---------------------------------------------------~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~  120 (327)
T KOG0643|consen   92 ---------------------------------------------------TNSPVKRVDFSFGGNLILASTDKQMGYTC  120 (327)
T ss_pred             ---------------------------------------------------cCCeeEEEeeccCCcEEEEEehhhcCcce
Confidence                                                               345688889999998887761    2346


Q ss_pred             cEEEEECC-------cceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEcc
Q psy14511        265 YIDLWHEQ-------EERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSP  335 (488)
Q Consensus       265 ~i~i~d~~-------~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~  335 (488)
                      .|.++|++       ..++...+..+...++.+-|  -++.|++|.+||.|..||++++...+.....|...|+.++++|
T Consensus       121 ~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~  200 (327)
T KOG0643|consen  121 FVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSR  200 (327)
T ss_pred             EEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccC
Confidence            78999987       34567788888899999999  5899999999999999999998888888899999999999999


Q ss_pred             CCcEEEEEe-cCeEEEEECCCCCCCcccceeee----eecCCCCEEEEEccCCCCeE------------EEEeCCCccee
Q psy14511        336 NGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVP----KLKREGRELVTSHGKQDCSL------------KMWEYPRLHLI  398 (488)
Q Consensus       336 ~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~----~~~~~~~~l~~~~g~~~~~i------------~i~d~~~~~~~  398 (488)
                      |..++++++ |.+-++||+.+.+..+.+....+    +++|....++...|.+-..|            ++|++-..+.+
T Consensus       201 d~T~FiT~s~Dttakl~D~~tl~v~Kty~te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEi  280 (327)
T KOG0643|consen  201 DRTYFITGSKDTTAKLVDVRTLEVLKTYTTERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEI  280 (327)
T ss_pred             CcceEEecccCccceeeeccceeeEEEeeecccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHh
Confidence            999999999 79999999999877665544433    88898887777422222222            23333334567


Q ss_pred             EEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCC
Q psy14511        399 EELKIHQERILSAVLSPDQTCVAAASADETISIWNCFP  436 (488)
Q Consensus       399 ~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~  436 (488)
                      ..+++|-++|++++|+|||+..++|+.||.|++.-++.
T Consensus       281 grvkGHFGPINsvAfhPdGksYsSGGEDG~VR~h~Fd~  318 (327)
T KOG0643|consen  281 GRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRLHHFDS  318 (327)
T ss_pred             ccccccccCcceeEECCCCcccccCCCCceEEEEEecc
Confidence            78899999999999999999999999999999986554

>KOG0276|consensus

Probab=100.00  E-value=1.8e-32  Score=238.47  Aligned_cols=263  Identities=15%  Similarity=0.254  Sum_probs=222.4

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSA   82 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~   82 (488)
                      -..+++++-.+|.|.|||.+++.. .+.+.-..-+|.+..|-+..+++++|+ |..|+|++.+++   ..+..+..|..-
T Consensus        24 tePw~la~LynG~V~IWnyetqtm-VksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfnynt~---ekV~~FeAH~Dy   99 (794)
T KOG0276|consen   24 TEPWILAALYNGDVQIWNYETQTM-VKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYNTG---EKVKTFEAHSDY   99 (794)
T ss_pred             CCceEEEeeecCeeEEEeccccee-eeeeeecccchhhheeeeccceEEEecCCceEEEEecccc---eeeEEeeccccc
Confidence            345788888999999999999874 466777778999999999999999999 899999999984   466778999999


Q ss_pred             eeEEEEecCCCeEEeeeCCcccceEEEEecCCC-eeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecc
Q psy14511         83 VKAIAWCPWEPTLLATGGGICDQTVRLWNSMNG-KEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQ  161 (488)
Q Consensus        83 v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (488)
                      |.+++.+|..+++++++.   |-+|++||++.+ .+.+.+.+|.+-+..+++.|..                        
T Consensus       100 IR~iavHPt~P~vLtsSD---Dm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD------------------------  152 (794)
T KOG0276|consen  100 IRSIAVHPTLPYVLTSSD---DMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKD------------------------  152 (794)
T ss_pred             eeeeeecCCCCeEEecCC---ccEEEEeeccCceeeeeEEcCcceEEEEEEecCCC------------------------
Confidence            999999999999988887   999999999865 5667778887655555555433                        


Q ss_pred             ccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCC
Q psy14511        162 SKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDN  241 (488)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~  241 (488)
                                                                    ++.+++++.|++|++|.+....+...++  + |.
T Consensus       153 ----------------------------------------------~ntFaS~sLDrTVKVWslgs~~~nfTl~--g-He  183 (794)
T KOG0276|consen  153 ----------------------------------------------PNTFASASLDRTVKVWSLGSPHPNFTLE--G-HE  183 (794)
T ss_pred             ----------------------------------------------ccceeeeeccccEEEEEcCCCCCceeee--c-cc
Confidence                                                          4678999999999999998877655554  5 99


Q ss_pred             CceEEEEEcCCC--CeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEec--CCEEEEeecCCeEEEEECcCCCcc
Q psy14511        242 AYISCVAWKPRT--TDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWN--GNLLSCGTIGGNILHYDVRTHSDY  317 (488)
Q Consensus       242 ~~i~~~~~~~~~--~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~  317 (488)
                      ..|+|+.|-+.|  .+|+++ +.|.++++||.++..|++++++|...|..+.|.  =..+++|++||++++|+..+.+ .
T Consensus       184 kGVN~Vdyy~~gdkpylIsg-aDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~lpiiisgsEDGTvriWhs~Ty~-l  261 (794)
T KOG0276|consen  184 KGVNCVDYYTGGDKPYLISG-ADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPELPIIISGSEDGTVRIWNSKTYK-L  261 (794)
T ss_pred             cCcceEEeccCCCcceEEec-CCCceEEEeecchHHHHHHhhcccccceEEEecCCCcEEEEecCCccEEEecCccee-h
Confidence            999999998755  689999 999999999999999999999999999999995  4789999999999999988764 4


Q ss_pred             ceeeecCCccEEEEEEccCCcEEEEEec-CeE
Q psy14511        318 PTAITREGDVVCGLKWSPNGRYLASGSN-NTV  348 (488)
Q Consensus       318 ~~~~~~~~~~i~~~~~s~~~~~l~~~~d-~~i  348 (488)
                      ...+.-.-+++++++-.+.+..++.|.| |.+
T Consensus       262 E~tLn~gleRvW~I~~~k~~~~i~vG~Deg~i  293 (794)
T KOG0276|consen  262 EKTLNYGLERVWCIAAHKGDGKIAVGFDEGSV  293 (794)
T ss_pred             hhhhhcCCceEEEEeecCCCCeEEEeccCCcE
Confidence            5555556677999998888888888877 544

>KOG0316|consensus

Probab=100.00  E-value=3.1e-33  Score=214.18  Aligned_cols=265  Identities=15%  Similarity=0.212  Sum_probs=217.8

Q ss_pred             cCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCccccccccc
Q psy14511          3 WNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLS   81 (488)
Q Consensus         3 ~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~   81 (488)
                      -||+|.++++.|.+|++|++..+..+ +.+.+|...|..++.+.|...+++++ |..|.+||+++++..   ..+.+|.+
T Consensus        27 ~dGnY~ltcGsdrtvrLWNp~rg~li-ktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGkv~---Rr~rgH~a  102 (307)
T KOG0316|consen   27 VDGNYCLTCGSDRTVRLWNPLRGALI-KTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGKVD---RRFRGHLA  102 (307)
T ss_pred             cCCCEEEEcCCCceEEeeccccccee-eeecCCCceeeeccccccccccccCCCCceEEEEEcccCeee---eecccccc
Confidence            38999999999999999999998854 77999999999999999999999988 999999999997644   45789999


Q ss_pred             ceeEEEEecCCCeEEeeeCCcccceEEEEecCCCee--eeeeecCCCccccccccccccccceeEEEEEeeeecccccee
Q psy14511         82 AVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKE--KCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVL  159 (488)
Q Consensus        82 ~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (488)
                      .|+.+.|+.+.. ++++++  .|.++++||-++...  ++.+...                                   
T Consensus       103 qVNtV~fNeesS-Vv~Sgs--fD~s~r~wDCRS~s~ePiQildea-----------------------------------  144 (307)
T KOG0316|consen  103 QVNTVRFNEESS-VVASGS--FDSSVRLWDCRSRSFEPIQILDEA-----------------------------------  144 (307)
T ss_pred             eeeEEEecCcce-EEEecc--ccceeEEEEcccCCCCccchhhhh-----------------------------------
Confidence            999999998875 555555  499999999876432  1111111                                   


Q ss_pred             ccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCC
Q psy14511        160 NQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTY  239 (488)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~  239 (488)
                                                            .-.+.++......+++++.||+++.||++.|+...-.     
T Consensus       145 --------------------------------------~D~V~Si~v~~heIvaGS~DGtvRtydiR~G~l~sDy-----  181 (307)
T KOG0316|consen  145 --------------------------------------KDGVSSIDVAEHEIVAGSVDGTVRTYDIRKGTLSSDY-----  181 (307)
T ss_pred             --------------------------------------cCceeEEEecccEEEeeccCCcEEEEEeecceeehhh-----
Confidence                                                  1123445556778999999999999999998754322     


Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe----cCCEEEEeecCCeEEEEECcCCC
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW----NGNLLSCGTIGGNILHYDVRTHS  315 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~----~~~~l~~~~~dg~i~i~d~~~~~  315 (488)
                      ...+|+|++|+++++..+++ +.++++++.|-.+++.+..+++|...-..+..    ....+++|++||.+++||+.+. 
T Consensus       182 ~g~pit~vs~s~d~nc~La~-~l~stlrLlDk~tGklL~sYkGhkn~eykldc~l~qsdthV~sgSEDG~Vy~wdLvd~-  259 (307)
T KOG0316|consen  182 FGHPITSVSFSKDGNCSLAS-SLDSTLRLLDKETGKLLKSYKGHKNMEYKLDCCLNQSDTHVFSGSEDGKVYFWDLVDE-  259 (307)
T ss_pred             cCCcceeEEecCCCCEEEEe-eccceeeecccchhHHHHHhcccccceeeeeeeecccceeEEeccCCceEEEEEeccc-
Confidence            56789999999999999999 99999999999999999999999887665544    4689999999999999999985 


Q ss_pred             ccceeeecCCcc-EEEEEEccCCcEEEEEecCeEEEEECC
Q psy14511        316 DYPTAITREGDV-VCGLKWSPNGRYLASGSNNTVKIWDFR  354 (488)
Q Consensus       316 ~~~~~~~~~~~~-i~~~~~s~~~~~l~~~~d~~i~iwd~~  354 (488)
                      ..+..+..+... +.+++++|.-..+.++.++.+..|--+
T Consensus       260 ~~~sk~~~~~~v~v~dl~~hp~~~~f~~A~~~~~~~~~~~  299 (307)
T KOG0316|consen  260 TQISKLSVVSTVIVTDLSCHPTMDDFITATGHGDLFWYQE  299 (307)
T ss_pred             eeeeeeccCCceeEEeeecccCccceeEecCCceeceeeh
Confidence            466667777766 899999999988888888777777543

>KOG2106|consensus

Probab=100.00  E-value=8.4e-31  Score=222.47  Aligned_cols=367  Identities=16%  Similarity=0.227  Sum_probs=268.0

Q ss_pred             CCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-C--------CeEEEEeccccCcCCCccccccccccee
Q psy14511         14 GGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-N--------NTVKIWDFRQLDAKRPQVNNQCHLSAVK   84 (488)
Q Consensus        14 dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d--------~~i~vwd~~~~~~~~~~~~~~~h~~~v~   84 (488)
                      -+.+.+++.+...  .+.+.+|...|.|++.+||.-.+|+|. .        ..+++||..+.   ..+..+......|.
T Consensus        84 A~V~Vl~n~ee~~--Qr~y~GH~ddikc~~vHPdri~vatGQ~ag~~g~~~~phvriWdsv~L---~TL~V~g~f~~GV~  158 (626)
T KOG2106|consen   84 AAVGVLYNWEERS--QRHYLGHNDDIKCMAVHPDRIRVATGQGAGTSGRPLQPHVRIWDSVTL---STLHVIGFFDRGVT  158 (626)
T ss_pred             ccEEEEEeehhhh--cccccCCCCceEEEeecCCceeeccCcccccCCCcCCCeeeecccccc---eeeeeeccccccce
Confidence            3456677775533  355789999999999999999999875 2        36999997763   34444445667899


Q ss_pred             EEEEecC-CCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecccc
Q psy14511         85 AIAWCPW-EPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSK  163 (488)
Q Consensus        85 ~l~~~~~-~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (488)
                      +++|++- +..++..-..+.+..+.+||+..+......+.....+....|.                             
T Consensus       159 ~vaFsk~~~G~~l~~vD~s~~h~lSVWdWqk~~~~~~vk~sne~v~~a~FH-----------------------------  209 (626)
T KOG2106|consen  159 CVAFSKINGGSLLCAVDDSNPHMLSVWDWQKKAKLGPVKTSNEVVFLATFH-----------------------------  209 (626)
T ss_pred             eeeecccCCCceEEEecCCCccccchhhchhhhccCcceeccceEEEEEec-----------------------------
Confidence            9999873 3334443333357789999998877655554432222222211                             


Q ss_pred             ccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEec-CCCCCC
Q psy14511        164 RTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEY-PTYDNA  242 (488)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~-~~~~~~  242 (488)
                                                                .-..+++..+..+.+.+|+.+.+...+...+ +.+...
T Consensus       210 ------------------------------------------Ptd~nliit~Gk~H~~Fw~~~~~~l~k~~~~fek~ekk  247 (626)
T KOG2106|consen  210 ------------------------------------------PTDPNLIITCGKGHLYFWTLRGGSLVKRQGIFEKREKK  247 (626)
T ss_pred             ------------------------------------------cCCCcEEEEeCCceEEEEEccCCceEEEeeccccccce
Confidence                                                      1235788888999999999998876554332 222457


Q ss_pred             ceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe-cCCEEEEeecCCeEEEEECcCCCc-----
Q psy14511        243 YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW-NGNLLSCGTIGGNILHYDVRTHSD-----  316 (488)
Q Consensus       243 ~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~-----  316 (488)
                      .|.|++|.++| .++++ .++|.|.||+..+.+..+....|.+.|.+++. ....|++|+.|+.|..||-.-.+.     
T Consensus       248 ~Vl~v~F~eng-dviTg-DS~G~i~Iw~~~~~~~~k~~~aH~ggv~~L~~lr~GtllSGgKDRki~~Wd~~y~k~r~~el  325 (626)
T KOG2106|consen  248 FVLCVTFLENG-DVITG-DSGGNILIWSKGTNRISKQVHAHDGGVFSLCMLRDGTLLSGGKDRKIILWDDNYRKLRETEL  325 (626)
T ss_pred             EEEEEEEcCCC-CEEee-cCCceEEEEeCCCceEEeEeeecCCceEEEEEecCccEeecCccceEEeccccccccccccC
Confidence            89999999998 46677 99999999999888877777799999999998 344455599999999998321100     


Q ss_pred             ----------------------------------cceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcc
Q psy14511        317 ----------------------------------YPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRP  361 (488)
Q Consensus       317 ----------------------------------~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~  361 (488)
                                                        ......+|.+..+.++.+|+...+++++ |+.+++|+-...+-.+.
T Consensus       326 Pe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~~~k~~wt~~  405 (626)
T KOG2106|consen  326 PEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWNDHKLEWTKI  405 (626)
T ss_pred             chhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChhheeeccCcceEEEccCCceeEEEE
Confidence                                              0112345667788999999999999999 79999999322211111


Q ss_pred             ccee--eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCc
Q psy14511        362 LGLI--VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDK  439 (488)
Q Consensus       362 ~~~~--~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~  439 (488)
                      +...  ...|+|.| .+++  |...|...+.|.++...+..-.. ..+++.++|+|+|.+||.|+.|+.|++|.+.....
T Consensus       406 ~~d~~~~~~fhpsg-~va~--Gt~~G~w~V~d~e~~~lv~~~~d-~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~  481 (626)
T KOG2106|consen  406 IEDPAECADFHPSG-VVAV--GTATGRWFVLDTETQDLVTIHTD-NEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGR  481 (626)
T ss_pred             ecCceeEeeccCcc-eEEE--eeccceEEEEecccceeEEEEec-CCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCc
Confidence            1111  23899999 7777  89999999999999666655544 88999999999999999999999999999987665


Q ss_pred             ccc---ccccCCcceEEeecCCCceE
Q psy14511        440 KRK---ARQVGSGSSLEFAILKQPVS  462 (488)
Q Consensus       440 ~~~---~~~~~~v~~~~~s~~~~~~~  462 (488)
                      ...   .-+..+++.|.||+|++.+.
T Consensus       482 ~y~r~~k~~gs~ithLDwS~Ds~~~~  507 (626)
T KOG2106|consen  482 KYSRVGKCSGSPITHLDWSSDSQFLV  507 (626)
T ss_pred             EEEEeeeecCceeEEeeecCCCceEE
Confidence            421   23448899999999999873

>KOG0305|consensus

Probab=100.00  E-value=1.5e-32  Score=241.43  Aligned_cols=294  Identities=27%  Similarity=0.467  Sum_probs=253.5

Q ss_pred             ccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCe
Q psy14511        176 GKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTD  255 (488)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  255 (488)
                      ....+..+..+.+++.+|.+..+|+...++|+..+.++.+.+..|++|+..++.......+   +...|+++.|+++|.+
T Consensus       155 r~~~r~~~~~p~rvLDaP~l~dDfY~nlldWss~n~laValg~~vylW~~~s~~v~~l~~~---~~~~vtSv~ws~~G~~  231 (484)
T KOG0305|consen  155 RKLKRKIPQTPYRVLDAPGLQDDFYLNLLDWSSANVLAVALGQSVYLWSASSGSVTELCSF---GEELVTSVKWSPDGSH  231 (484)
T ss_pred             ccccCcccCChhhhccCCcccccHhhhHhhcccCCeEEEEecceEEEEecCCCceEEeEec---CCCceEEEEECCCCCE
Confidence            3455678889999999999999999999999999999999999999999999997777776   4788999999999999


Q ss_pred             EEEEeCCCCcEEEEECCcceeeeeecc-ccccEEEEEecCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEc
Q psy14511        256 LAVTNTCTEYIDLWHEQEERLIQKLRT-HMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWS  334 (488)
Q Consensus       256 l~~~~~~~~~i~i~d~~~~~~~~~~~~-~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s  334 (488)
                      |+++ ..+|.|.|||....+.+..+.+ |...|.+++|++..+.+|+.++.|..+|++........+.+|...|+.+.|+
T Consensus       232 LavG-~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws  310 (484)
T KOG0305|consen  232 LAVG-TSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWNSSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWS  310 (484)
T ss_pred             EEEe-ecCCeEEEEehhhccccccccCCcCceeEEEeccCceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEEC
Confidence            9999 9999999999999999999988 9999999999999999999999999999998776666688999999999999


Q ss_pred             cCCcEEEEEe-cCeEEEEECCCCCCCcccceee-----eeecCC-CCEEEEEccCCCCeEEEEeCCCcceeEEEeecccc
Q psy14511        335 PNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIV-----PKLKRE-GRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQER  407 (488)
Q Consensus       335 ~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~-----~~~~~~-~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~  407 (488)
                      +|++++|+|+ |+.+.|||....+....+..+.     .+|+|- ...||+..|..|+.|++||..+++.+..+. -.+.
T Consensus       311 ~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vd-tgsQ  389 (484)
T KOG0305|consen  311 PDGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVD-TGSQ  389 (484)
T ss_pred             CCCCeeccCCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEecccc-cCCc
Confidence            9999999999 7999999996655444443332     288885 567777788899999999999999988776 4466


Q ss_pred             EEEEEEcCCCCEEEEE--eCCCcEEEEecCCCCcc-ccccccCCcceEEeecCCCceEEEEeeecccccceeeEEEE
Q psy14511        408 ILSAVLSPDQTCVAAA--SADETISIWNCFPRDKK-RKARQVGSGSSLEFAILKQPVSLTALLRSRAVEKQQHAIAY  481 (488)
Q Consensus       408 v~~~~~s~~~~~l~t~--~~dg~v~iw~~~~~~~~-~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~  481 (488)
                      |.+|.|++..+-|+++  ..++.|.||++.+.++. .+.+|...|..++++|||+.+       ..+..|..+..|.
T Consensus       390 VcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SPdg~~i-------~t~a~DETlrfw~  459 (484)
T KOG0305|consen  390 VCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAELLGHTSRVLYLALSPDGETI-------VTGAADETLRFWN  459 (484)
T ss_pred             eeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeeeecCCcceeEEEEECCCCCEE-------EEecccCcEEecc
Confidence            9999999998777663  46689999999997776 678899999999999999888       3344454554444

>KOG0305|consensus

Probab=100.00  E-value=7.2e-32  Score=237.14  Aligned_cols=274  Identities=26%  Similarity=0.509  Sum_probs=226.8

Q ss_pred             Ccc-CCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccc
Q psy14511          1 MCW-NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQC   78 (488)
Q Consensus         1 ~~~-dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~   78 (488)
                      |.| ..+.||+|. +..|.+|+..++. +......+.+.|+++.|+++|++||.|. +|.|.|||..+.   +.+..+.+
T Consensus       183 ldWss~n~laVal-g~~vylW~~~s~~-v~~l~~~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~---k~~~~~~~  257 (484)
T KOG0305|consen  183 LDWSSANVLAVAL-GQSVYLWSASSGS-VTELCSFGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQ---KKTRTLRG  257 (484)
T ss_pred             hhcccCCeEEEEe-cceEEEEecCCCc-eEEeEecCCCceEEEEECCCCCEEEEeecCCeEEEEehhhc---cccccccC
Confidence            457 456888876 5589999999887 3344445588999999999999999998 999999998874   34445566


Q ss_pred             -cccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccc
Q psy14511         79 -HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKK  157 (488)
Q Consensus        79 -h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (488)
                       |...|-+++|.   ..++++|+.  |+.|..+|++..+....                                     
T Consensus       258 ~h~~rvg~laW~---~~~lssGsr--~~~I~~~dvR~~~~~~~-------------------------------------  295 (484)
T KOG0305|consen  258 SHASRVGSLAWN---SSVLSSGSR--DGKILNHDVRISQHVVS-------------------------------------  295 (484)
T ss_pred             CcCceeEEEecc---CceEEEecC--CCcEEEEEEecchhhhh-------------------------------------
Confidence             99999999998   246777775  99999999876652111                                     


Q ss_pred             eeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecC
Q psy14511        158 VLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYP  237 (488)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~  237 (488)
                                                                                                   .+.
T Consensus       296 -----------------------------------------------------------------------------~~~  298 (484)
T KOG0305|consen  296 -----------------------------------------------------------------------------TLQ  298 (484)
T ss_pred             -----------------------------------------------------------------------------hhh
Confidence                                                                                         022


Q ss_pred             CCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe---cCCEEEEe--ecCCeEEEEECc
Q psy14511        238 TYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW---NGNLLSCG--TIGGNILHYDVR  312 (488)
Q Consensus       238 ~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~--~~dg~i~i~d~~  312 (488)
                      + |...|..++|++++++++++ +.|+.+.|||.....+...+..|...|.+++|   ...+||+|  +.|+.|++||..
T Consensus       299 ~-H~qeVCgLkws~d~~~lASG-gnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~  376 (484)
T KOG0305|consen  299 G-HRQEVCGLKWSPDGNQLASG-GNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTN  376 (484)
T ss_pred             c-ccceeeeeEECCCCCeeccC-CCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcC
Confidence            2 88899999999999999999 99999999999888999999999999999999   46888886  468999999999


Q ss_pred             CCCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeC
Q psy14511        313 THSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEY  392 (488)
Q Consensus       313 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~  392 (488)
                      ++..... + .....|+.+.|++..+-|+++.                                    |..++.|.||++
T Consensus       377 ~g~~i~~-v-dtgsQVcsL~Wsk~~kEi~sth------------------------------------G~s~n~i~lw~~  418 (484)
T KOG0305|consen  377 TGARIDS-V-DTGSQVCSLIWSKKYKELLSTH------------------------------------GYSENQITLWKY  418 (484)
T ss_pred             CCcEecc-c-ccCCceeeEEEcCCCCEEEEec------------------------------------CCCCCcEEEEec
Confidence            8653322 2 2335599999999887776653                                    677788999999


Q ss_pred             CCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCC
Q psy14511        393 PRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRD  438 (488)
Q Consensus       393 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~  438 (488)
                      .+.+.+..+.+|..+|..+++||||..+++|+.|.++++|++-+..
T Consensus       419 ps~~~~~~l~gH~~RVl~la~SPdg~~i~t~a~DETlrfw~~f~~~  464 (484)
T KOG0305|consen  419 PSMKLVAELLGHTSRVLYLALSPDGETIVTGAADETLRFWNLFDER  464 (484)
T ss_pred             cccceeeeecCCcceeEEEEECCCCCEEEEecccCcEEeccccCCC
Confidence            9999999999999999999999999999999999999999998753

>KOG1407|consensus

Probab=100.00  E-value=2.4e-31  Score=207.03  Aligned_cols=275  Identities=22%  Similarity=0.356  Sum_probs=225.8

Q ss_pred             eeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEE
Q psy14511         30 TAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVR  108 (488)
Q Consensus        30 ~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~  108 (488)
                      +.+++|...|.+++|+.+|+.||+|+ |+++.||+++..+ ...-....+|.+.|-.++|.|..+.++++.++  |.+|+
T Consensus        14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r-~~~~~~~~gh~~svdql~w~~~~~d~~atas~--dk~ir   90 (313)
T KOG1407|consen   14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDR-FRKELVYRGHTDSVDQLCWDPKHPDLFATASG--DKTIR   90 (313)
T ss_pred             HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecchh-hhhhhcccCCCcchhhheeCCCCCcceEEecC--CceEE
Confidence            34678999999999999999999999 9999999998653 23333467899999999999987777777765  99999


Q ss_pred             EEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCce
Q psy14511        109 LWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPER  188 (488)
Q Consensus       109 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (488)
                      +||++.+++...+........                                                           
T Consensus        91 ~wd~r~~k~~~~i~~~~eni~-----------------------------------------------------------  111 (313)
T KOG1407|consen   91 IWDIRSGKCTARIETKGENIN-----------------------------------------------------------  111 (313)
T ss_pred             EEEeccCcEEEEeeccCcceE-----------------------------------------------------------
Confidence            999999998877665422111                                                           


Q ss_pred             eecCCCccccceeeeeeeC--CCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcE
Q psy14511        189 ILEAPSIINDFYTSGLDWG--YHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYI  266 (488)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i  266 (488)
                                     +.|+  ++.++++..|..|.+.|.++.+.....+    ....+..++|+.++..++.. ...|+|
T Consensus       112 ---------------i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~----~~~e~ne~~w~~~nd~Fflt-~GlG~v  171 (313)
T KOG1407|consen  112 ---------------ITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQ----FKFEVNEISWNNSNDLFFLT-NGLGCV  171 (313)
T ss_pred             ---------------EEEcCCCCEEEEecCcccEEEEEecccceeehhc----ccceeeeeeecCCCCEEEEe-cCCceE
Confidence                           2232  3567777799999999999888766665    34567888999888888888 778999


Q ss_pred             EEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe
Q psy14511        267 DLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS  344 (488)
Q Consensus       267 ~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~  344 (488)
                      .|.....-+++..+++|.....|+.|  +|+++++|+.|-.+.+||+... .+.+.+..+.-+|..+.||.||++||+++
T Consensus       172 ~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~EL-iC~R~isRldwpVRTlSFS~dg~~lASaS  250 (313)
T KOG1407|consen  172 EILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDEL-ICERCISRLDWPVRTLSFSHDGRMLASAS  250 (313)
T ss_pred             EEEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHh-hhheeeccccCceEEEEeccCcceeeccC
Confidence            99999999999999999999999999  6999999999999999999875 57888999999999999999999999886


Q ss_pred             cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEe
Q psy14511        345 NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAAS  424 (488)
Q Consensus       345 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~  424 (488)
                                                            +|..|-|=++++|..+.+++ +.++...++|+|...+||.+.
T Consensus       251 --------------------------------------EDh~IDIA~vetGd~~~eI~-~~~~t~tVAWHPk~~LLAyA~  291 (313)
T KOG1407|consen  251 --------------------------------------EDHFIDIAEVETGDRVWEIP-CEGPTFTVAWHPKRPLLAYAC  291 (313)
T ss_pred             --------------------------------------ccceEEeEecccCCeEEEee-ccCCceeEEecCCCceeeEEe
Confidence                                                  34444444555666666665 778899999999999999887


Q ss_pred             CC
Q psy14511        425 AD  426 (488)
Q Consensus       425 ~d  426 (488)
                      .|
T Consensus       292 dd  293 (313)
T KOG1407|consen  292 DD  293 (313)
T ss_pred             cC
Confidence            66

>KOG0276|consensus

Probab=100.00  E-value=2.6e-31  Score=231.28  Aligned_cols=284  Identities=17%  Similarity=0.244  Sum_probs=243.1

Q ss_pred             ccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccc
Q psy14511         76 NQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDR  155 (488)
Q Consensus        76 ~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (488)
                      +..++..|.++.|+|..+.++++--   .|.+.|||.++...++.+.....++....|..                    
T Consensus         9 ~~~rSdRVKsVd~HPtePw~la~Ly---nG~V~IWnyetqtmVksfeV~~~PvRa~kfia--------------------   65 (794)
T KOG0276|consen    9 FQSRSDRVKSVDFHPTEPWILAALY---NGDVQIWNYETQTMVKSFEVSEVPVRAAKFIA--------------------   65 (794)
T ss_pred             hhccCCceeeeecCCCCceEEEeee---cCeeEEEecccceeeeeeeecccchhhheeee--------------------
Confidence            4458899999999999999888886   99999999999988888776655444333222                    


Q ss_pred             cceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEe
Q psy14511        156 KKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVE  235 (488)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~  235 (488)
                                                                         ..+-+++++.|..|++|+..+++.+..++
T Consensus        66 ---------------------------------------------------RknWiv~GsDD~~IrVfnynt~ekV~~Fe   94 (794)
T KOG0276|consen   66 ---------------------------------------------------RKNWIVTGSDDMQIRVFNYNTGEKVKTFE   94 (794)
T ss_pred             ---------------------------------------------------ccceEEEecCCceEEEEecccceeeEEee
Confidence                                                               23568899999999999999999888777


Q ss_pred             cCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCc-ceeeeeeccccccEEEEEe---cCCEEEEeecCCeEEEEEC
Q psy14511        236 YPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE-ERLIQKLRTHMHQVIAMCW---NGNLLSCGTIGGNILHYDV  311 (488)
Q Consensus       236 ~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~-~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~i~d~  311 (488)
                      .   |...|++++.+|...+++++ +.|-.|++||.+. ..+.+++++|..-|.+++|   |.+.+++++-|++|++|.+
T Consensus        95 A---H~DyIR~iavHPt~P~vLts-SDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWsl  170 (794)
T KOG0276|consen   95 A---HSDYIRSIAVHPTLPYVLTS-SDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSL  170 (794)
T ss_pred             c---cccceeeeeecCCCCeEEec-CCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEc
Confidence            6   99999999999999999999 9999999999876 4788899999999999999   6789999999999999999


Q ss_pred             cCCCccceeeecCCccEEEEEEccCC--cEEEEEec-CeEEEEECCCCCCCcccceeee-----eecCCCCEEEEEccCC
Q psy14511        312 RTHSDYPTAITREGDVVCGLKWSPNG--RYLASGSN-NTVKIWDFRQLDAKRPLGLIVP-----KLKREGRELVTSHGKQ  383 (488)
Q Consensus       312 ~~~~~~~~~~~~~~~~i~~~~~s~~~--~~l~~~~d-~~i~iwd~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~g~~  383 (488)
                      ... .+..++.+|...|+++.+-+-|  .+|++|+| ..++|||..+....+.+..+..     .|+|.-..+++  |++
T Consensus       171 gs~-~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~lpiiis--gsE  247 (794)
T KOG0276|consen  171 GSP-HPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPELPIIIS--GSE  247 (794)
T ss_pred             CCC-CCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccceEEEecCCCcEEEE--ecC
Confidence            885 5888999999999999998754  69999995 9999999999877776665533     88888888888  999


Q ss_pred             CCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccc
Q psy14511        384 DCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKR  441 (488)
Q Consensus       384 ~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~  441 (488)
                      ||+++||+..+.+...++.-.-.+|++++-.+.++.++.|.+.|.|. ..+-..++..
T Consensus       248 DGTvriWhs~Ty~lE~tLn~gleRvW~I~~~k~~~~i~vG~Deg~i~-v~lgreeP~v  304 (794)
T KOG0276|consen  248 DGTVRIWNSKTYKLEKTLNYGLERVWCIAAHKGDGKIAVGFDEGSVT-VKLGREEPAV  304 (794)
T ss_pred             CccEEEecCcceehhhhhhcCCceEEEEeecCCCCeEEEeccCCcEE-EEccCCCCce
Confidence            99999999999998888888888999999999999999998888664 4555555443

>KOG0313|consensus

Probab=100.00  E-value=1.2e-31  Score=219.50  Aligned_cols=292  Identities=20%  Similarity=0.353  Sum_probs=215.7

Q ss_pred             CceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccC---CcEEEEec-CCeEEEEeccccCcCC-Cccccccc
Q psy14511          5 GNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPN---GRYLASGS-NNTVKIWDFRQLDAKR-PQVNNQCH   79 (488)
Q Consensus         5 g~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~---g~~las~~-d~~i~vwd~~~~~~~~-~~~~~~~h   79 (488)
                      +++|++|++||.++|||.....  ...+.||.++|.+++|--.   ...+++++ |.++++|.++.++... .+....||
T Consensus       115 ~~~IltgsYDg~~riWd~~Gk~--~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~~~~GH  192 (423)
T KOG0313|consen  115 SKWILTGSYDGTSRIWDLKGKS--IKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKALKVCRGH  192 (423)
T ss_pred             CceEEEeecCCeeEEEecCCce--EEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhhHHhHhccc
Confidence            6899999999999999986543  3668999999998888542   33688888 9999999998655332 23334599


Q ss_pred             ccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeecccccee
Q psy14511         80 LSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVL  159 (488)
Q Consensus        80 ~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (488)
                      ...|.++...++|..+++++   +|.+|++|+..+. ....+...+.                                 
T Consensus       193 k~~V~sVsv~~sgtr~~SgS---~D~~lkiWs~~~~-~~~~~E~~s~---------------------------------  235 (423)
T KOG0313|consen  193 KRSVDSVSVDSSGTRFCSGS---WDTMLKIWSVETD-EEDELESSSN---------------------------------  235 (423)
T ss_pred             ccceeEEEecCCCCeEEeec---ccceeeecccCCC-ccccccccch---------------------------------
Confidence            99999999999997655544   4999999993221 1111111000                                 


Q ss_pred             ccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCC
Q psy14511        160 NQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTY  239 (488)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~  239 (488)
                          +.          .+.                                          .-.+-..+....+..+.+ 
T Consensus       236 ----~r----------rk~------------------------------------------~~~~~~~~~r~P~vtl~G-  258 (423)
T KOG0313|consen  236 ----RR----------RKK------------------------------------------QKREKEGGTRTPLVTLEG-  258 (423)
T ss_pred             ----hh----------hhh------------------------------------------hhhhhcccccCceEEecc-
Confidence                00          000                                          000001122234455666 


Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCC--
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHS--  315 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~--  315 (488)
                      |..+|.++.|++ ...++++ +.|.+|+.||+.++.....+.+ ...+.+++.  ..++|++|+.|..+++||.+++.  
T Consensus       259 Ht~~Vs~V~w~d-~~v~yS~-SwDHTIk~WDletg~~~~~~~~-~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs  335 (423)
T KOG0313|consen  259 HTEPVSSVVWSD-ATVIYSV-SWDHTIKVWDLETGGLKSTLTT-NKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGS  335 (423)
T ss_pred             cccceeeEEEcC-CCceEee-cccceEEEEEeecccceeeeec-CcceeEeecccccceeeecCCCCceeecCCCCCCCc
Confidence            999999999998 5567777 9999999999999998888864 567788887  57899999999999999998865  


Q ss_pred             ccceeeecCCccEEEEEEccCCcEE-EEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCC
Q psy14511        316 DYPTAITREGDVVCGLKWSPNGRYL-ASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYP  393 (488)
Q Consensus       316 ~~~~~~~~~~~~i~~~~~s~~~~~l-~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~  393 (488)
                      .....+.+|...|.++.|+|...+. ++++ |+++++||++                                       
T Consensus       336 ~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvR---------------------------------------  376 (423)
T KOG0313|consen  336 VVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVR---------------------------------------  376 (423)
T ss_pred             eeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEec---------------------------------------
Confidence            3567788999999999999977654 4444 4555555554                                       


Q ss_pred             Ccc-eeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecC
Q psy14511        394 RLH-LIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCF  435 (488)
Q Consensus       394 ~~~-~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~  435 (488)
                      +.+ ++..+.+|...|.++.|. ++.++++|+.|.+|+|+.-.
T Consensus       377 S~k~plydI~~h~DKvl~vdW~-~~~~IvSGGaD~~l~i~~~~  418 (423)
T KOG0313|consen  377 STKAPLYDIAGHNDKVLSVDWN-EGGLIVSGGADNKLRIFKGS  418 (423)
T ss_pred             cCCCcceeeccCCceEEEEecc-CCceEEeccCcceEEEeccc
Confidence            444 678888999999999996 67799999999999998754

>KOG1539|consensus

Probab=100.00  E-value=1.1e-30  Score=234.76  Aligned_cols=406  Identities=17%  Similarity=0.295  Sum_probs=276.2

Q ss_pred             ceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEE-EEec-CCeEEEEeccccCcCCCcccccccccce
Q psy14511          6 NLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYL-ASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAV   83 (488)
Q Consensus         6 ~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~l-as~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v   83 (488)
                      ..+|.|..+|+|.|++++.++.+ ..++...+.|+.++|.-||+.+ |+|. .|.+.+||++..+...  .....|.+.|
T Consensus       215 DVVaiG~~~G~ViifNlK~dkil-~sFk~d~g~VtslSFrtDG~p~las~~~~G~m~~wDLe~kkl~~--v~~nah~~sv  291 (910)
T KOG1539|consen  215 DVVAIGLENGTVIIFNLKFDKIL-MSFKQDWGRVTSLSFRTDGNPLLASGRSNGDMAFWDLEKKKLIN--VTRNAHYGSV  291 (910)
T ss_pred             eEEEEeccCceEEEEEcccCcEE-EEEEccccceeEEEeccCCCeeEEeccCCceEEEEEcCCCeeee--eeeccccCCc
Confidence            46899999999999999999865 4444446899999999999965 4554 7999999998633221  2234699999


Q ss_pred             eEEEEecCCCeEEeeeCCcccceEEEEecCCC----eeeeeeecCCCccccccccccccccceeEEEEEeeeecccccee
Q psy14511         84 KAIAWCPWEPTLLATGGGICDQTVRLWNSMNG----KEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVL  159 (488)
Q Consensus        84 ~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (488)
                      ....|.|..+.+++++.   |+.+++|=.+++    +.++.-.+|+.+..++.+.  .......++..      .+..+.
T Consensus       292 ~~~~fl~~epVl~ta~~---DnSlk~~vfD~~dg~pR~LR~R~GHs~Pp~~irfy--~~~g~~ilsa~------~Drt~r  360 (910)
T KOG1539|consen  292 TGATFLPGEPVLVTAGA---DNSLKVWVFDSGDGVPRLLRSRGGHSAPPSCIRFY--GSQGHFILSAK------QDRTLR  360 (910)
T ss_pred             ccceecCCCceEeeccC---CCceeEEEeeCCCCcchheeeccCCCCCchheeee--ccCcEEEEecc------cCcchh
Confidence            99999998877776666   999998866543    3344444555544444332  11111111111      011111


Q ss_pred             ccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC------CCcEEEEE-CCCeEEEEECCCCce-E
Q psy14511        160 NQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG------YHDTLAVA-LDTSVYTWNTKTNKT-Q  231 (488)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~-~d~~v~iw~~~~~~~-~  231 (488)
                      .++-..   ......+................ ......-.+..+.+.      -++++++. .+...+.|+...... .
T Consensus       361 ~fs~~~---e~~~~~l~~~~~~~~~kk~~~~~-~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~  436 (910)
T KOG1539|consen  361 SFSVIS---ESQSQELGQLHNKKRAKKVNVFS-TEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGR  436 (910)
T ss_pred             hhhhhH---HHHhHhhcccccccccccccccc-hhhhcCCcceeeecccchhhhhcceeEEecCcceEEEEeccCccccc
Confidence            111100   00000000000000000000000 000000011112221      24667766 778899999987654 2


Q ss_pred             EEEe---cCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeee---ccccccEEEEEec--CCEEEEeecC
Q psy14511        232 LLVE---YPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKL---RTHMHQVIAMCWN--GNLLSCGTIG  303 (488)
Q Consensus       232 ~~~~---~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~---~~~~~~v~~~~~~--~~~l~~~~~d  303 (488)
                      ..+.   +.. ....+++++.++-|+..+.| +..|.|.+|++++|.....+   ..|..+|+.++.|  ++.+++++.+
T Consensus       437 ~~L~~~~~~~-~~~~~~av~vs~CGNF~~IG-~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~  514 (910)
T KOG1539|consen  437 HVLDPKRFKK-DDINATAVCVSFCGNFVFIG-YSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGAD  514 (910)
T ss_pred             EEecCccccc-cCcceEEEEEeccCceEEEe-ccCCeEEEEEcccCeeecccccCccccCceeEEEecCCCceEEEccCc
Confidence            2222   111 34679999999999999998 99999999999999888887   5899999999996  5779999999


Q ss_pred             CeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEec-CeEEEEECCCCCCCcccceeee-----eecCCCCEEE
Q psy14511        304 GNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN-NTVKIWDFRQLDAKRPLGLIVP-----KLKREGRELV  377 (488)
Q Consensus       304 g~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d-~~i~iwd~~~~~~~~~~~~~~~-----~~~~~~~~l~  377 (488)
                      |.+.+||..+.. +...+. -...+..+..+.....+|.+.| -.|+++|..+....+.+..+..     +|||||++++
T Consensus       515 Gilkfw~f~~k~-l~~~l~-l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWli  592 (910)
T KOG1539|consen  515 GILKFWDFKKKV-LKKSLR-LGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLI  592 (910)
T ss_pred             ceEEEEecCCcc-eeeeec-cCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEE
Confidence            999999998743 333332 3345778888888888888885 9999999998877776664432     9999999999


Q ss_pred             EEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCC-CcEEEEecCC
Q psy14511        378 TSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASAD-ETISIWNCFP  436 (488)
Q Consensus       378 ~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~d-g~v~iw~~~~  436 (488)
                      +  .+.|++|++||+.++.++..+. -..+.+++.|||+|.+|||...| .-|++|.-.+
T Consensus       593 s--asmD~tIr~wDlpt~~lID~~~-vd~~~~sls~SPngD~LAT~Hvd~~gIylWsNks  649 (910)
T KOG1539|consen  593 S--ASMDSTIRTWDLPTGTLIDGLL-VDSPCTSLSFSPNGDFLATVHVDQNGIYLWSNKS  649 (910)
T ss_pred             E--eecCCcEEEEeccCcceeeeEe-cCCcceeeEECCCCCEEEEEEecCceEEEEEchh
Confidence            9  6899999999999999987775 46789999999999999999988 6799997543

>KOG1408|consensus

Probab=100.00  E-value=7.4e-32  Score=238.33  Aligned_cols=390  Identities=14%  Similarity=0.203  Sum_probs=268.0

Q ss_pred             ccCCceEEEeecCCeEEEEEcccCcccceeeccc-------------------C----ceEEEEEEccCCcEEEEec-CC
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITRE-------------------G----DVVCGLKWSPNGRYLASGS-NN   57 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h-------------------~----~~V~~l~~sp~g~~las~~-d~   57 (488)
                      +-+.++|++|+.+|+|+||+..+-.-....-..|                   .    -..-++.|+|....|...- |.
T Consensus       267 cVs~r~I~cgCa~g~vrlFnp~tL~y~~Tlpr~halg~d~a~~~q~~~~~s~~~~a~fPD~IA~~Fdet~~klscVYndh  346 (1080)
T KOG1408|consen  267 CVSSRLIACGCAKGMVRLFNPETLDYAGTLPRSHALGSDTANLSQPEPKNSESSPAIFPDAIACQFDETTDKLSCVYNDH  346 (1080)
T ss_pred             eeecceEEEeeccceeeecCcchhhhccccccccccccchhhcccccccccccCcccCCceeEEEecCCCceEEEEEcCc
Confidence            3367899999999999999987643211110111                   0    1234678998888887776 99


Q ss_pred             eEEEEeccccCcCCCcccccccccceeEEEEec------------CCCeEEeeeCCcccceEEEEecCCCeeeeeeecCC
Q psy14511         58 TVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCP------------WEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDS  125 (488)
Q Consensus        58 ~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~------------~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~  125 (488)
                      .++|||++..........+..|...|+.+.--|            .+ -++++++   |++|++|++..+.--..+..+-
T Consensus       347 SlYvWDvrD~~kvgk~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~-cF~TCSs---D~TIRlW~l~~ctnn~vyrRNi  422 (1080)
T KOG1408|consen  347 SLYVWDVRDVNKVGKCSSMLYHSACIWDVENLPCNVHSPTAACLPRG-CFTTCSS---DGTIRLWDLAFCTNNQVYRRNI  422 (1080)
T ss_pred             eEEEEeccccccccceeeeeeccceeeeeccccccccCcccccCCcc-ceeEecC---CCcEEEeecccccccceeeccc
Confidence            999999988655555555667999999887654            22 2344444   9999999997633211111110


Q ss_pred             CccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeee
Q psy14511        126 QQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLD  205 (488)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (488)
                      .......+.+.....                .++.                  ....+.........-+....+...++.
T Consensus       423 ls~~l~ki~y~d~~~----------------q~~~------------------d~~~~~fdka~~s~~d~r~G~R~~~vS  468 (1080)
T KOG1408|consen  423 LSANLSKIPYEDSTQ----------------QIMH------------------DASAGIFDKALVSTCDSRFGFRALAVS  468 (1080)
T ss_pred             chhhhhcCccccCch----------------hhhh------------------hccCCcccccchhhcCcccceEEEEEC
Confidence            000000000000000                0000                  000000000001111122233333344


Q ss_pred             eCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCC---CCeEEEEeCCCCcEEEEECCc-ceeeeeec
Q psy14511        206 WGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPR---TTDLAVTNTCTEYIDLWHEQE-ERLIQKLR  281 (488)
Q Consensus       206 ~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~~~~~i~i~d~~~-~~~~~~~~  281 (488)
                      .....++++-..|.+++|++..-+....++.   |...|.|+.|+..   .++|+++ +.|.-|.+||... ..+++++.
T Consensus       469 p~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eA---HesEilcLeyS~p~~~~kLLASa-srdRlIHV~Dv~rny~l~qtld  544 (1080)
T KOG1408|consen  469 PDGQHLASGDRGGNLRVYDLQELEYTCFMEA---HESEILCLEYSFPVLTNKLLASA-SRDRLIHVYDVKRNYDLVQTLD  544 (1080)
T ss_pred             CCcceecccCccCceEEEEehhhhhhhheec---ccceeEEEeecCchhhhHhhhhc-cCCceEEEEecccccchhhhhc
Confidence            4445666677899999999988776555554   9999999999863   3566666 9999999999865 46678899


Q ss_pred             cccccEEEEEe--cC--CEEEEeecCCeEEEEECcCCCccceeeec-----CCccEEEEEEccCCcEEEEEe-cCeEEEE
Q psy14511        282 THMHQVIAMCW--NG--NLLSCGTIGGNILHYDVRTHSDYPTAITR-----EGDVVCGLKWSPNGRYLASGS-NNTVKIW  351 (488)
Q Consensus       282 ~~~~~v~~~~~--~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-----~~~~i~~~~~s~~~~~l~~~~-d~~i~iw  351 (488)
                      +|...|+++.|  +|  ..+++++.|..|.+--.+.... ...+..     ....++.++..|..+++++++ |..|+||
T Consensus       545 ~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~-g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif  623 (1080)
T KOG1408|consen  545 GHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASS-GRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIF  623 (1080)
T ss_pred             ccccceeEEEEeecCCceEEEeccCchhhheehhccccC-ceeccccccccccceEEEeeeCCCcceEEEEecccceEEE
Confidence            99999999999  44  7889999999887654442221 122222     235689999999999999999 7999999


Q ss_pred             ECCCCCCCcccceee--------eeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEE
Q psy14511        352 DFRQLDAKRPLGLIV--------PKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAA  423 (488)
Q Consensus       352 d~~~~~~~~~~~~~~--------~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~  423 (488)
                      |+.++++.+.++...        ....|.|-|+++  .+.|.++.++|+.+++++.+..||...|+.+.|++|.+.|++.
T Consensus       624 ~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~at--Scsdktl~~~Df~sgEcvA~m~GHsE~VTG~kF~nDCkHlISv  701 (1080)
T KOG1408|consen  624 DIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLAT--SCSDKTLCFVDFVSGECVAQMTGHSEAVTGVKFLNDCKHLISV  701 (1080)
T ss_pred             eccccceeeeecccccCCCceEEEEECCCccEEEE--eecCCceEEEEeccchhhhhhcCcchheeeeeecccchhheee
Confidence            999998776665431        177899999999  6889999999999999999999999999999999999999999


Q ss_pred             eCCCcEEEEecCC
Q psy14511        424 SADETISIWNCFP  436 (488)
Q Consensus       424 ~~dg~v~iw~~~~  436 (488)
                      +.||.|.||.+..
T Consensus       702 sgDgCIFvW~lp~  714 (1080)
T KOG1408|consen  702 SGDGCIFVWKLPL  714 (1080)
T ss_pred             cCCceEEEEECch
Confidence            9999999999874

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=100.00  E-value=8e-31  Score=231.86  Aligned_cols=265  Identities=27%  Similarity=0.486  Sum_probs=217.0

Q ss_pred             cCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCccccccccc
Q psy14511          3 WNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLS   81 (488)
Q Consensus         3 ~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~   81 (488)
                      .++++|++++.||.|.+|++.+++ ....+..|...+..+.|+|++++|++++ |+.|++||+.++   ..+..+..|..
T Consensus        19 ~~~~~l~~~~~~g~i~i~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~---~~~~~~~~~~~   94 (289)
T cd00200          19 PDGKLLATGSGDGTIKVWDLETGE-LLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETG---ECVRTLTGHTS   94 (289)
T ss_pred             CCCCEEEEeecCcEEEEEEeeCCC-cEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcc---cceEEEeccCC
Confidence            378999999999999999999876 4456788999999999999999999998 999999999864   33444667888


Q ss_pred             ceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecc
Q psy14511         82 AVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQ  161 (488)
Q Consensus        82 ~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (488)
                      .|.++.|+++++.+++++.   |+.+.+||+.+++....+..+..                                   
T Consensus        95 ~i~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~-----------------------------------  136 (289)
T cd00200          95 YVSSVAFSPDGRILSSSSR---DKTIKVWDVETGKCLTTLRGHTD-----------------------------------  136 (289)
T ss_pred             cEEEEEEcCCCCEEEEecC---CCeEEEEECCCcEEEEEeccCCC-----------------------------------
Confidence            9999999999766555554   99999999987776655543311                                   


Q ss_pred             ccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCC-CcEEEEEC-CCeEEEEECCCCceEEEEecCCC
Q psy14511        162 SKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGY-HDTLAVAL-DTSVYTWNTKTNKTQLLVEYPTY  239 (488)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-d~~v~iw~~~~~~~~~~~~~~~~  239 (488)
                                                            .+..+.+++ +.+++++. ++.|++||+.+++....+..   
T Consensus       137 --------------------------------------~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~---  175 (289)
T cd00200         137 --------------------------------------WVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTG---  175 (289)
T ss_pred             --------------------------------------cEEEEEEcCcCCEEEEEcCCCcEEEEEccccccceeEec---
Confidence                                                  122233433 45666665 99999999998877666653   


Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCcc
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDY  317 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~  317 (488)
                      +...+.+++|+|+++.++++ +.++.+++||++.++.+..+..|...+.++.+  ++.++++++.+|.+++||+.+. ..
T Consensus       176 ~~~~i~~~~~~~~~~~l~~~-~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~~-~~  253 (289)
T cd00200         176 HTGEVNSVAFSPDGEKLLSS-SSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTG-EC  253 (289)
T ss_pred             CccccceEEECCCcCEEEEe-cCCCcEEEEECCCCceecchhhcCCceEEEEEcCCCcEEEEEcCCCcEEEEEcCCc-ee
Confidence            77799999999999999998 77999999999998888888889999999999  4677777777999999999875 45


Q ss_pred             ceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEE
Q psy14511        318 PTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWD  352 (488)
Q Consensus       318 ~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd  352 (488)
                      ...+..|...+.+++|+|++++|++++ |+.+++|+
T Consensus       254 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~  289 (289)
T cd00200         254 VQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD  289 (289)
T ss_pred             EEEccccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence            666778888999999999999999988 59999996

>KOG0275|consensus

Probab=100.00  E-value=5.2e-33  Score=223.17  Aligned_cols=277  Identities=17%  Similarity=0.311  Sum_probs=231.7

Q ss_pred             ccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcc-----cccccccceeEEEEecCCCeEEeeeCCcccceE
Q psy14511         34 REGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQV-----NNQCHLSAVKAIAWCPWEPTLLATGGGICDQTV  107 (488)
Q Consensus        34 ~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~-----~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i  107 (488)
                      +....+.|..|||||+||++|+ ||.|.||+..+++..+.+.     .+.-+..+|.|+.|+.|... +++|+.  ||.|
T Consensus       211 g~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEM-lAsGsq--DGkI  287 (508)
T KOG0275|consen  211 GQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEM-LASGSQ--DGKI  287 (508)
T ss_pred             ccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHH-hhccCc--CCcE
Confidence            4556688999999999999999 9999999999877554332     23347789999999999875 555554  9999


Q ss_pred             EEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCc
Q psy14511        108 RLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPE  187 (488)
Q Consensus       108 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (488)
                      ++|.+.+|.+++.+...                                                               
T Consensus       288 KvWri~tG~ClRrFdrA---------------------------------------------------------------  304 (508)
T KOG0275|consen  288 KVWRIETGQCLRRFDRA---------------------------------------------------------------  304 (508)
T ss_pred             EEEEEecchHHHHhhhh---------------------------------------------------------------
Confidence            99999999887655432                                                               


Q ss_pred             eeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEE
Q psy14511        188 RILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYID  267 (488)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~  267 (488)
                                                                          |...|+|+.|+.|+..++++ +.|.+++
T Consensus       305 ----------------------------------------------------HtkGvt~l~FSrD~SqiLS~-sfD~tvR  331 (508)
T KOG0275|consen  305 ----------------------------------------------------HTKGVTCLSFSRDNSQILSA-SFDQTVR  331 (508)
T ss_pred             ----------------------------------------------------hccCeeEEEEccCcchhhcc-cccceEE
Confidence                                                                78889999999999999999 9999999


Q ss_pred             EEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeee--cCCccEEEEEEccCC-cEEEE
Q psy14511        268 LWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAIT--REGDVVCGLKWSPNG-RYLAS  342 (488)
Q Consensus       268 i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~~i~~~~~s~~~-~~l~~  342 (488)
                      +.-+.++++++.+++|..-|+...|  +|..+++++.||+|++|+..+.. +...+.  +..-+|+++-.-|.. ..+++
T Consensus       332 iHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDgtvkvW~~Ktte-C~~Tfk~~~~d~~vnsv~~~PKnpeh~iV  410 (508)
T KOG0275|consen  332 IHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISASSDGTVKVWHGKTTE-CLSTFKPLGTDYPVNSVILLPKNPEHFIV  410 (508)
T ss_pred             EeccccchhHHHhcCccccccceEEcCCCCeEEEecCCccEEEecCcchh-hhhhccCCCCcccceeEEEcCCCCceEEE
Confidence            9999999999999999999999999  79999999999999999998864 444443  344567888777744 57777


Q ss_pred             Eec-CeEEEEECCCCCCCccc-------ceee-eeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEE
Q psy14511        343 GSN-NTVKIWDFRQLDAKRPL-------GLIV-PKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVL  413 (488)
Q Consensus       343 ~~d-~~i~iwd~~~~~~~~~~-------~~~~-~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~  413 (488)
                      |.. +++.|.++... ..+.+       ..++ ++.+|.|.+++.  -++|+.++.|.+.+|++..++.-|...|..++-
T Consensus       411 CNrsntv~imn~qGQ-vVrsfsSGkREgGdFi~~~lSpkGewiYc--igED~vlYCF~~~sG~LE~tl~VhEkdvIGl~H  487 (508)
T KOG0275|consen  411 CNRSNTVYIMNMQGQ-VVRSFSSGKREGGDFINAILSPKGEWIYC--IGEDGVLYCFSVLSGKLERTLPVHEKDVIGLTH  487 (508)
T ss_pred             EcCCCeEEEEeccce-EEeeeccCCccCCceEEEEecCCCcEEEE--EccCcEEEEEEeecCceeeeeeccccccccccc
Confidence            774 99999998632 11111       2223 388999999999  588999999999999999999999999999999


Q ss_pred             cCCCCEEEEEeCCCcEEEEe
Q psy14511        414 SPDQTCVAAASADETISIWN  433 (488)
Q Consensus       414 s~~~~~l~t~~~dg~v~iw~  433 (488)
                      +|..+.||+-+.||.+++|.
T Consensus       488 HPHqNllAsYsEDgllKLWk  507 (508)
T KOG0275|consen  488 HPHQNLLASYSEDGLLKLWK  507 (508)
T ss_pred             CcccchhhhhcccchhhhcC
Confidence            99999999999999999995

>KOG0281|consensus

Probab=100.00  E-value=5.2e-33  Score=225.09  Aligned_cols=246  Identities=14%  Similarity=0.287  Sum_probs=213.1

Q ss_pred             ceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeee
Q psy14511        199 FYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQ  278 (488)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~  278 (488)
                      -.+.++.++++.++++..|++|.+||..+..+...+..   |.+.|.|+.|.  .+.+++| +.|.+|++||.++++++.
T Consensus       198 kgVYClQYDD~kiVSGlrDnTikiWD~n~~~c~~~L~G---HtGSVLCLqyd--~rviisG-SSDsTvrvWDv~tge~l~  271 (499)
T KOG0281|consen  198 KGVYCLQYDDEKIVSGLRDNTIKIWDKNSLECLKILTG---HTGSVLCLQYD--ERVIVSG-SSDSTVRVWDVNTGEPLN  271 (499)
T ss_pred             CceEEEEecchhhhcccccCceEEeccccHHHHHhhhc---CCCcEEeeecc--ceEEEec-CCCceEEEEeccCCchhh
Confidence            34667888889999999999999999998877665544   99999999985  4566666 999999999999999999


Q ss_pred             eeccccccEEEEEecCCEEEEeecCCeEEEEECcCCC--ccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCC
Q psy14511        279 KLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHS--DYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQ  355 (488)
Q Consensus       279 ~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~  355 (488)
                      ++-.|...|..+.|++.++++++.|.++.+||+..+.  .+...+.+|...|+.+.|+  .+++++++ |.+|++|++.+
T Consensus       272 tlihHceaVLhlrf~ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd--~kyIVsASgDRTikvW~~st  349 (499)
T KOG0281|consen  272 TLIHHCEAVLHLRFSNGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTST  349 (499)
T ss_pred             HHhhhcceeEEEEEeCCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc--cceEEEecCCceEEEEeccc
Confidence            9999999999999999999999999999999998764  3456788999999999995  56999998 79999999999


Q ss_pred             CCCCccccee---eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEE
Q psy14511        356 LDAKRPLGLI---VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIW  432 (488)
Q Consensus       356 ~~~~~~~~~~---~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw  432 (488)
                      .+..+.+...   +.+....++++++  |+.|.+|++||++.|.+++.++||+.-|.++.|  |.+.+++|+.||.|++|
T Consensus       350 ~efvRtl~gHkRGIAClQYr~rlvVS--GSSDntIRlwdi~~G~cLRvLeGHEeLvRciRF--d~krIVSGaYDGkikvW  425 (499)
T KOG0281|consen  350 CEFVRTLNGHKRGIACLQYRDRLVVS--GSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVW  425 (499)
T ss_pred             eeeehhhhcccccceehhccCeEEEe--cCCCceEEEEeccccHHHHHHhchHHhhhheee--cCceeeeccccceEEEE
Confidence            9877777655   3377788888888  999999999999999999999999999999999  78899999999999999


Q ss_pred             ecCCCCcc----------ccccccCCcceEEeec
Q psy14511        433 NCFPRDKK----------RKARQVGSGSSLEFAI  456 (488)
Q Consensus       433 ~~~~~~~~----------~~~~~~~~v~~~~~s~  456 (488)
                      |+..+...          ....|.+.|..+.|-.
T Consensus       426 dl~aaldpra~~~~~Cl~~lv~hsgRVFrLQFD~  459 (499)
T KOG0281|consen  426 DLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDE  459 (499)
T ss_pred             ecccccCCcccccchHHHhhhhccceeEEEeecc
Confidence            99876543          2356778888887743

>KOG0282|consensus

Probab=100.00  E-value=3.8e-33  Score=235.43  Aligned_cols=268  Identities=18%  Similarity=0.315  Sum_probs=217.3

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSA   82 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~   82 (488)
                      .+.+|++++.|+.|+||++.......+++.+|..+|.+++|+++|..+.+++ |+.|++||+++|+......    ....
T Consensus       226 ~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~~~~f~----~~~~  301 (503)
T KOG0282|consen  226 KGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETGQVLSRFH----LDKV  301 (503)
T ss_pred             eeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeeeeccccceEEEEEe----cCCC
Confidence            6889999999999999999986656788999999999999999999999999 9999999999977554332    2357


Q ss_pred             eeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccc
Q psy14511         83 VKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQS  162 (488)
Q Consensus        83 v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (488)
                      +.++.|.||+..++.+|..  |+.|+.||+++++.++++..+-..+..+.|...                          
T Consensus       302 ~~cvkf~pd~~n~fl~G~s--d~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~--------------------------  353 (503)
T KOG0282|consen  302 PTCVKFHPDNQNIFLVGGS--DKKIRQWDIRSGKVVQEYDRHLGAILDITFVDE--------------------------  353 (503)
T ss_pred             ceeeecCCCCCcEEEEecC--CCcEEEEeccchHHHHHHHhhhhheeeeEEccC--------------------------
Confidence            8999999999666666664  999999999999988888777555544443332                          


Q ss_pred             cccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCC
Q psy14511        163 KRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNA  242 (488)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~  242 (488)
                                                                   +.++++.+.|+.+++|+...+-........  ..-
T Consensus       354 ---------------------------------------------g~rFissSDdks~riWe~~~~v~ik~i~~~--~~h  386 (503)
T KOG0282|consen  354 ---------------------------------------------GRRFISSSDDKSVRIWENRIPVPIKNIADP--EMH  386 (503)
T ss_pred             ---------------------------------------------CceEeeeccCccEEEEEcCCCccchhhcch--hhc
Confidence                                                         357889999999999999887765554433  334


Q ss_pred             ceEEEEEcCCCCeEEEEeCCCCcEEEEECCcc---eeeeeeccccccEE--EEEe--cCCEEEEeecCCeEEEEECcCCC
Q psy14511        243 YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEE---RLIQKLRTHMHQVI--AMCW--NGNLLSCGTIGGNILHYDVRTHS  315 (488)
Q Consensus       243 ~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~---~~~~~~~~~~~~v~--~~~~--~~~~l~~~~~dg~i~i~d~~~~~  315 (488)
                      ...++..+|+++++++- +.|..|.++.+...   ..-..+++|...-.  .+.|  ||++|++|+.||.+.+||.++. 
T Consensus       387 smP~~~~~P~~~~~~aQ-s~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~-  464 (503)
T KOG0282|consen  387 TMPCLTLHPNGKWFAAQ-SMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTT-  464 (503)
T ss_pred             cCcceecCCCCCeehhh-ccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEeechhh-
Confidence            45689999999999999 99999999986543   22345667755443  3444  8999999999999999999985 


Q ss_pred             ccceeeecCCccEEEEEEccCC-cEEEEEe-cCeEEEEE
Q psy14511        316 DYPTAITREGDVVCGLKWSPNG-RYLASGS-NNTVKIWD  352 (488)
Q Consensus       316 ~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~-d~~i~iwd  352 (488)
                      .....+..|+.++..+.|+|.. ..+|+|+ +|.|++||
T Consensus       465 kl~~~lkah~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd  503 (503)
T KOG0282|consen  465 KLVSKLKAHDQPCIGVDWHPVEPSKVATCGWDGLIKIWD  503 (503)
T ss_pred             hhhhccccCCcceEEEEecCCCcceeEecccCceeEecC
Confidence            5788899999999999999965 5778888 79999996

>KOG0772|consensus

Probab=100.00  E-value=1.4e-31  Score=227.69  Aligned_cols=296  Identities=20%  Similarity=0.389  Sum_probs=222.8

Q ss_pred             eecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCC-Cccc-ccccccceeEEEEecCCCeEEeeeCCcccceE
Q psy14511         31 AITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKR-PQVN-NQCHLSAVKAIAWCPWEPTLLATGGGICDQTV  107 (488)
Q Consensus        31 ~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~-~~~~-~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i  107 (488)
                      .+.+|+..|+++++.|.|..|++|+ |.+|++||+....... .... .......|.+++|++.|..+++..+   ....
T Consensus       162 ~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg---~aqa  238 (641)
T KOG0772|consen  162 QLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSG---SAQA  238 (641)
T ss_pred             eccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEec---Ccce
Confidence            4678999999999999999999999 9999999997533211 1111 2234558999999999999988887   8899


Q ss_pred             EEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCc
Q psy14511        108 RLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPE  187 (488)
Q Consensus       108 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (488)
                      +++|- .|..+..+...                                                               
T Consensus       239 kl~DR-dG~~~~e~~KG---------------------------------------------------------------  254 (641)
T KOG0772|consen  239 KLLDR-DGFEIVEFSKG---------------------------------------------------------------  254 (641)
T ss_pred             eEEcc-CCceeeeeecc---------------------------------------------------------------
Confidence            99995 44433222211                                                               


Q ss_pred             eeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEE
Q psy14511        188 RILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYID  267 (488)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~  267 (488)
                                                     .-+|-|+.        ...+ |...++|.+|+|..+..+.+++.||+++
T Consensus       255 -------------------------------DQYI~Dm~--------nTKG-Hia~lt~g~whP~~k~~FlT~s~DgtlR  294 (641)
T KOG0772|consen  255 -------------------------------DQYIRDMY--------NTKG-HIAELTCGCWHPDNKEEFLTCSYDGTLR  294 (641)
T ss_pred             -------------------------------chhhhhhh--------ccCC-ceeeeeccccccCcccceEEecCCCcEE
Confidence                                           11111211        1223 8888999999998765555549999999


Q ss_pred             EEECCccee-eeee-----ccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCC--ccceeeecCCc--cEEEEEEcc
Q psy14511        268 LWHEQEERL-IQKL-----RTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHS--DYPTAITREGD--VVCGLKWSP  335 (488)
Q Consensus       268 i~d~~~~~~-~~~~-----~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~--~i~~~~~s~  335 (488)
                      +||+...+. ...+     .+..-+++.++|  +++.||+|+.||.|.+|+.....  .....-.+|..  .|++++||+
T Consensus       295 iWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~  374 (641)
T KOG0772|consen  295 IWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSY  374 (641)
T ss_pred             EEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEecc
Confidence            999876432 2222     123446678888  79999999999999999985432  23344556766  899999999


Q ss_pred             CCcEEEEEe-cCeEEEEECCCCCCCcccc--------eeeeeecCCCCEEEEEc----cCCCCeEEEEeCCCcceeEEEe
Q psy14511        336 NGRYLASGS-NNTVKIWDFRQLDAKRPLG--------LIVPKLKREGRELVTSH----GKQDCSLKMWEYPRLHLIEELK  402 (488)
Q Consensus       336 ~~~~l~~~~-d~~i~iwd~~~~~~~~~~~--------~~~~~~~~~~~~l~~~~----g~~~~~i~i~d~~~~~~~~~~~  402 (488)
                      ||++|++-+ |+++++||++..+..-...        ..-++|||+.+++++.+    +...+.+++||..+.+.+.++.
T Consensus       375 dg~~LlSRg~D~tLKvWDLrq~kkpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~  454 (641)
T KOG0772|consen  375 DGNYLLSRGFDDTLKVWDLRQFKKPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKID  454 (641)
T ss_pred             ccchhhhccCCCceeeeeccccccchhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEec
Confidence            999999988 7999999999875432221        11339999999999843    3346789999999999999998


Q ss_pred             eccccEEEEEEcCCCCEEEEEeCCCcEEEEe
Q psy14511        403 IHQERILSAVLSPDQTCVAAASADETISIWN  433 (488)
Q Consensus       403 ~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~  433 (488)
                      -....|..+.|+|.-+.|..++.||.+++|=
T Consensus       455 i~~aSvv~~~WhpkLNQi~~gsgdG~~~vyY  485 (641)
T KOG0772|consen  455 ISTASVVRCLWHPKLNQIFAGSGDGTAHVYY  485 (641)
T ss_pred             CCCceEEEEeecchhhheeeecCCCceEEEE
Confidence            8888999999999999999999999998863

>KOG1446|consensus

Probab=100.00  E-value=4.3e-30  Score=206.10  Aligned_cols=282  Identities=13%  Similarity=0.200  Sum_probs=228.1

Q ss_pred             ccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeec
Q psy14511         74 VNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEI  153 (488)
Q Consensus        74 ~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (488)
                      ..+....+.|.++.|+++|..+++++.   |.++++||..+++++..+......+....                     
T Consensus         8 k~f~~~~~~i~sl~fs~~G~~litss~---dDsl~LYd~~~g~~~~ti~skkyG~~~~~---------------------   63 (311)
T KOG1446|consen    8 KVFRETNGKINSLDFSDDGLLLITSSE---DDSLRLYDSLSGKQVKTINSKKYGVDLAC---------------------   63 (311)
T ss_pred             cccccCCCceeEEEecCCCCEEEEecC---CCeEEEEEcCCCceeeEeecccccccEEE---------------------
Confidence            344556788999999999998888776   88999999999998888776533222221                     


Q ss_pred             cccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEE--CCCeEEEEECCCCceE
Q psy14511        154 DRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVA--LDTSVYTWNTKTNKTQ  231 (488)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~v~iw~~~~~~~~  231 (488)
                                                                        +...+..++.++  .|..|+..++.+.+.+
T Consensus        64 --------------------------------------------------Fth~~~~~i~sStk~d~tIryLsl~dNkyl   93 (311)
T KOG1446|consen   64 --------------------------------------------------FTHHSNTVIHSSTKEDDTIRYLSLHDNKYL   93 (311)
T ss_pred             --------------------------------------------------EecCCceEEEccCCCCCceEEEEeecCceE
Confidence                                                              122234566665  4889999999999988


Q ss_pred             EEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEEC
Q psy14511        232 LLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDV  311 (488)
Q Consensus       232 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~  311 (488)
                      +.+..   |...|..++.+|-+..++++ +.|++|++||++..++...+.....++.+....|-++|++...+.|++||+
T Consensus        94 RYF~G---H~~~V~sL~~sP~~d~FlS~-S~D~tvrLWDlR~~~cqg~l~~~~~pi~AfDp~GLifA~~~~~~~IkLyD~  169 (311)
T KOG1446|consen   94 RYFPG---HKKRVNSLSVSPKDDTFLSS-SLDKTVRLWDLRVKKCQGLLNLSGRPIAAFDPEGLIFALANGSELIKLYDL  169 (311)
T ss_pred             EEcCC---CCceEEEEEecCCCCeEEec-ccCCeEEeeEecCCCCceEEecCCCcceeECCCCcEEEEecCCCeEEEEEe
Confidence            87765   99999999999999999999 999999999999988888888778888888888999999998889999999


Q ss_pred             cCCC-ccceeee---cCCccEEEEEEccCCcEEEEEec-CeEEEEECCCCCCCccccee--------eeeecCCCCEEEE
Q psy14511        312 RTHS-DYPTAIT---REGDVVCGLKWSPNGRYLASGSN-NTVKIWDFRQLDAKRPLGLI--------VPKLKREGRELVT  378 (488)
Q Consensus       312 ~~~~-~~~~~~~---~~~~~i~~~~~s~~~~~l~~~~d-~~i~iwd~~~~~~~~~~~~~--------~~~~~~~~~~l~~  378 (488)
                      +.-. .+...+.   +.....+.+.|||||++++.+.+ +.+++.|.-++.....+...        ..+|+||+++++.
T Consensus       170 Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~Fvl~  249 (311)
T KOG1446|consen  170 RSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSKFVLS  249 (311)
T ss_pred             cccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCCcEEEE
Confidence            8753 3333333   33567889999999999998886 99999999888655444332        3389999999999


Q ss_pred             EccCCCCeEEEEeCCCcceeEEEee-ccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCC
Q psy14511        379 SHGKQDCSLKMWEYPRLHLIEELKI-HQERILSAVLSPDQTCVAAASADETISIWNCFPR  437 (488)
Q Consensus       379 ~~g~~~~~i~i~d~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~  437 (488)
                        |+.||+|++|+++++..+..+++ +.+++.++.|+|.-..+++++  ..+.+|=....
T Consensus       250 --gs~dg~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~~~mf~sa~--s~l~fw~p~~~  305 (311)
T KOG1446|consen  250 --GSDDGTIHVWNLETGKKVAVLRGPNGGPVSCVRFNPRYAMFVSAS--SNLVFWLPDED  305 (311)
T ss_pred             --ecCCCcEEEEEcCCCcEeeEecCCCCCCccccccCCceeeeeecC--ceEEEEecccc
Confidence              89999999999999999999998 688999999999877776664  56888865543

>KOG0640|consensus

Probab=100.00  E-value=2.4e-31  Score=212.25  Aligned_cols=285  Identities=20%  Similarity=0.302  Sum_probs=226.5

Q ss_pred             eecccCceEEEEEEccCCcEEEEec-CCeEEEEeccc------------cC---cCCCcccccccccceeEEEEecCCCe
Q psy14511         31 AITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQ------------LD---AKRPQVNNQCHLSAVKAIAWCPWEPT   94 (488)
Q Consensus        31 ~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~------------~~---~~~~~~~~~~h~~~v~~l~~~~~~~~   94 (488)
                      .+..|..++.+-+|||||.++|+|+ |..|+|.|++.            +.   ....+.++..|...|+++.|+|... 
T Consensus       107 ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~-  185 (430)
T KOG0640|consen  107 YLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRET-  185 (430)
T ss_pred             EEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhh-
Confidence            5678999999999999999999999 99999999872            11   1124556778999999999999885 


Q ss_pred             EEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecc
Q psy14511         95 LLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRT  174 (488)
Q Consensus        95 l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (488)
                      ++++++.  |++|+++|+..-...+.++                                                    
T Consensus       186 ILiS~sr--D~tvKlFDfsK~saKrA~K----------------------------------------------------  211 (430)
T KOG0640|consen  186 ILISGSR--DNTVKLFDFSKTSAKRAFK----------------------------------------------------  211 (430)
T ss_pred             eEEeccC--CCeEEEEecccHHHHHHHH----------------------------------------------------
Confidence            5555553  9999999986433211110                                                    


Q ss_pred             cccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCC
Q psy14511        175 LGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTT  254 (488)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  254 (488)
                                                                                .++    ...++.++.|+|.|.
T Consensus       212 ----------------------------------------------------------~~q----d~~~vrsiSfHPsGe  229 (430)
T KOG0640|consen  212 ----------------------------------------------------------VFQ----DTEPVRSISFHPSGE  229 (430)
T ss_pred             ----------------------------------------------------------Hhh----ccceeeeEeecCCCc
Confidence                                                                      111    456799999999999


Q ss_pred             eEEEEeCCCCcEEEEECCcceeeeee---ccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCC-ccE
Q psy14511        255 DLAVTNTCTEYIDLWHEQEERLIQKL---RTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREG-DVV  328 (488)
Q Consensus       255 ~l~~~~~~~~~i~i~d~~~~~~~~~~---~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~~i  328 (488)
                      +++++ .....+++||+++.++...-   ..|.+.|+++.+  .+++.++++.||.|++||--.++.....-..|. ..|
T Consensus       230 fllvg-TdHp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsev  308 (430)
T KOG0640|consen  230 FLLVG-TDHPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEV  308 (430)
T ss_pred             eEEEe-cCCCceeEEeccceeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCcee
Confidence            99999 99999999999998876554   468899999999  689999999999999999877653333344554 569


Q ss_pred             EEEEEccCCcEEEEEe-cCeEEEEECCCCCCCccccee----------eeeecCCCCEEEEEccCCCCeEEEEeCCCcce
Q psy14511        329 CGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLI----------VPKLKREGRELVTSHGKQDCSLKMWEYPRLHL  397 (488)
Q Consensus       329 ~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~----------~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~  397 (488)
                      ++..|..+|+++.+.+ |..+++|.+.++.........          ...|+....+++.. ....+.+.-||.++...
T Consensus       309 cSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~p-DEas~slcsWdaRtadr  387 (430)
T KOG0640|consen  309 CSAVFTKNGKYILSSGKDSTVKLWEISTGRMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFP-DEASNSLCSWDARTADR  387 (430)
T ss_pred             eeEEEccCCeEEeecCCcceeeeeeecCCceEEEEecCCcccchhhhhhhhhcCccceEEcc-ccccCceeeccccchhh
Confidence            9999999999999988 799999999988543332221          12677777887775 45567899999998876


Q ss_pred             eEEE-eeccccEEEEEEcCCCCEEEEEeCCCcEEEEec
Q psy14511        398 IEEL-KIHQERILSAVLSPDQTCVAAASADETISIWNC  434 (488)
Q Consensus       398 ~~~~-~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~  434 (488)
                      +..+ .+|++.+..+.-||.+.-++|||.|-.+++|--
T Consensus       388 ~~l~slgHn~a~R~i~HSP~~p~FmTcsdD~raRFWyr  425 (430)
T KOG0640|consen  388 VALLSLGHNGAVRWIVHSPVEPAFMTCSDDFRARFWYR  425 (430)
T ss_pred             hhhcccCCCCCceEEEeCCCCCceeeecccceeeeeee
Confidence            5544 479999999999999999999999999999964

>KOG0277|consensus

Probab=100.00  E-value=3.1e-31  Score=205.57  Aligned_cols=264  Identities=22%  Similarity=0.383  Sum_probs=209.0

Q ss_pred             cCCeEEEEEcccCcccceee-cccCceEEEEEEccCC-cEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEe
Q psy14511         13 IGGNILHYDVRTHSDYPTAI-TREGDVVCGLKWSPNG-RYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWC   89 (488)
Q Consensus        13 ~dg~i~iwd~~~~~~~~~~~-~~h~~~V~~l~~sp~g-~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~   89 (488)
                      ..|.+.|-++...+.+.... -.-.+.+..++|+++. +.+++++ ||++++||..  ....++..++.|...|.++.|+
T Consensus        36 G~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~--~~s~Pi~~~kEH~~EV~Svdwn  113 (311)
T KOG0277|consen   36 GNGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSENHENQVIAASGDGSLRLFDLT--MPSKPIHKFKEHKREVYSVDWN  113 (311)
T ss_pred             cCceEEEEecCCCCCeEEEEeeecccceeEeeecCCCcceEEEEecCceEEEeccC--CCCcchhHHHhhhhheEEeccc
Confidence            47899999997554443322 1345679999999954 3555554 9999999953  4456888899999999999999


Q ss_pred             cCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccce
Q psy14511         90 PWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPT  169 (488)
Q Consensus        90 ~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (488)
                      +..++.+.+++  +|++|++|+..-++.+++                                                 
T Consensus       114 ~~~r~~~ltsS--WD~TiKLW~~~r~~Sv~T-------------------------------------------------  142 (311)
T KOG0277|consen  114 TVRRRIFLTSS--WDGTIKLWDPNRPNSVQT-------------------------------------------------  142 (311)
T ss_pred             cccceeEEeec--cCCceEeecCCCCcceEe-------------------------------------------------
Confidence            98877777776  799999999765543322                                                 


Q ss_pred             eeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEE
Q psy14511        170 QFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAW  249 (488)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~  249 (488)
                                                                                        +.+ |...|...+|
T Consensus       143 ------------------------------------------------------------------f~g-h~~~Iy~a~~  155 (311)
T KOG0277|consen  143 ------------------------------------------------------------------FNG-HNSCIYQAAF  155 (311)
T ss_pred             ------------------------------------------------------------------ecC-CccEEEEEec
Confidence                                                                              222 7788999999


Q ss_pred             cCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe---cCCEEEEeecCCeEEEEECcCCCccceeeecCCc
Q psy14511        250 KPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW---NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGD  326 (488)
Q Consensus       250 ~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~  326 (488)
                      +|....++..++.|+.+++||++.......++.|...+.++.|   +.+.+++|+.|+.|+.||+++.+.++..+.+|.-
T Consensus       156 sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~  235 (311)
T KOG0277|consen  156 SPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGL  235 (311)
T ss_pred             CCCCCCeEEEccCCceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEecCCCceEEEEehhhccccceeecCCce
Confidence            9976544444499999999999876555558999999999999   6899999999999999999999899999999999


Q ss_pred             cEEEEEEccCC-cEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeec
Q psy14511        327 VVCGLKWSPNG-RYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIH  404 (488)
Q Consensus       327 ~i~~~~~s~~~-~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~  404 (488)
                      .|..+.|||.. ..||+++ |-+++|||....                           |           ..+.+...|
T Consensus       236 AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~---------------------------d-----------s~~e~~~~H  277 (311)
T KOG0277|consen  236 AVRKVKFSPHHASLLASASYDMTVRIWDPERQ---------------------------D-----------SAIETVDHH  277 (311)
T ss_pred             EEEEEecCcchhhHhhhccccceEEecccccc---------------------------h-----------hhhhhhhcc
Confidence            99999999965 5777777 677777776533                           1           223344568


Q ss_pred             cccEEEEEEcC-CCCEEEEEeCCCcEEEEec
Q psy14511        405 QERILSAVLSP-DQTCVAAASADETISIWNC  434 (488)
Q Consensus       405 ~~~v~~~~~s~-~~~~l~t~~~dg~v~iw~~  434 (488)
                      +.-+..+.||+ ++.++|+++.|+.++||+.
T Consensus       278 tEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~p  308 (311)
T KOG0277|consen  278 TEFVCGLDWSLFDPGQVASTGWDELLYVWNP  308 (311)
T ss_pred             ceEEeccccccccCceeeecccccceeeecc
Confidence            88899999998 5779999999999999984

>KOG0274|consensus

Probab=100.00  E-value=1.2e-30  Score=238.70  Aligned_cols=271  Identities=21%  Similarity=0.365  Sum_probs=226.8

Q ss_pred             cCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCccccccccc
Q psy14511          3 WNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLS   81 (488)
Q Consensus         3 ~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~   81 (488)
                      |.++++++++.+.+|++||..++..+...+.||.+.|.+++|..-+.+|++|+ |.+++|||..+++   +...+.+|.+
T Consensus       216 ~~~~~~~~~s~~~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~---C~~~l~gh~s  292 (537)
T KOG0274|consen  216 LHDGFFKSGSDDSTLHLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGE---CTHSLQGHTS  292 (537)
T ss_pred             eecCeEEecCCCceeEEeecccceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCc---EEEEecCCCc
Confidence            35678899999999999999999977777999999999999998889999999 9999999998855   5566789999


Q ss_pred             ceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecc
Q psy14511         82 AVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQ  161 (488)
Q Consensus        82 ~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (488)
                      .|.++...+   .++++|+.  |.+|++|++.++..+..+.+                                      
T Consensus       293 tv~~~~~~~---~~~~sgs~--D~tVkVW~v~n~~~l~l~~~--------------------------------------  329 (537)
T KOG0274|consen  293 SVRCLTIDP---FLLVSGSR--DNTVKVWDVTNGACLNLLRG--------------------------------------  329 (537)
T ss_pred             eEEEEEccC---ceEeeccC--CceEEEEeccCcceEEEecc--------------------------------------
Confidence            999998754   45555553  99999999987765433321                                      


Q ss_pred             ccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCC
Q psy14511        162 SKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDN  241 (488)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~  241 (488)
                                                                                                    |.
T Consensus       330 ------------------------------------------------------------------------------h~  331 (537)
T KOG0274|consen  330 ------------------------------------------------------------------------------HT  331 (537)
T ss_pred             ------------------------------------------------------------------------------cc
Confidence                                                                                          67


Q ss_pred             CceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEecC-CEEEEeecCCeEEEEECcCCCcccee
Q psy14511        242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNG-NLLSCGTIGGNILHYDVRTHSDYPTA  320 (488)
Q Consensus       242 ~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~  320 (488)
                      .+|.++..+  +..++++ +.|++|++||..+++++..+.+|...|.++.+++ ..+++|+.|+.|++||+++...+...
T Consensus       332 ~~V~~v~~~--~~~lvsg-s~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~~~~~~~~Sgs~D~~IkvWdl~~~~~c~~t  408 (537)
T KOG0274|consen  332 GPVNCVQLD--EPLLVSG-SYDGTVKVWDPRTGKCLKSLSGHTGRVYSLIVDSENRLLSGSLDTTIKVWDLRTKRKCIHT  408 (537)
T ss_pred             ccEEEEEec--CCEEEEE-ecCceEEEEEhhhceeeeeecCCcceEEEEEecCcceEEeeeeccceEeecCCchhhhhhh
Confidence            789999987  6788888 9999999999999999999999999999999988 99999999999999999986468888


Q ss_pred             eecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEE
Q psy14511        321 ITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEE  400 (488)
Q Consensus       321 ~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~  400 (488)
                      +.+|.+-+..+.+  .+++|+++                                      +.|++|++||..+++++.+
T Consensus       409 l~~h~~~v~~l~~--~~~~Lvs~--------------------------------------~aD~~Ik~WD~~~~~~~~~  448 (537)
T KOG0274|consen  409 LQGHTSLVSSLLL--RDNFLVSS--------------------------------------SADGTIKLWDAEEGECLRT  448 (537)
T ss_pred             hcCCccccccccc--ccceeEec--------------------------------------cccccEEEeecccCceeee
Confidence            8889887754443  34555554                                      4566677777777788888


Q ss_pred             Eee-ccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcccc
Q psy14511        401 LKI-HQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRK  442 (488)
Q Consensus       401 ~~~-~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~  442 (488)
                      +.+ |...|+.+++.  ...+++++.||.+++||+.+++....
T Consensus       449 ~~~~~~~~v~~l~~~--~~~il~s~~~~~~~l~dl~~~~~~~~  489 (537)
T KOG0274|consen  449 LEGRHVGGVSALALG--KEEILCSSDDGSVKLWDLRSGTLIRT  489 (537)
T ss_pred             eccCCcccEEEeecC--cceEEEEecCCeeEEEecccCchhhh
Confidence            888 67889999886  56888999999999999999988753

>KOG0288|consensus

Probab=100.00  E-value=2.4e-32  Score=226.02  Aligned_cols=277  Identities=18%  Similarity=0.301  Sum_probs=233.2

Q ss_pred             eecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEE
Q psy14511         31 AITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRL  109 (488)
Q Consensus        31 ~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~v  109 (488)
                      .+..|.+.|..+.|-++...|++|+ |..|++|++...+ ...+.++.+-.++|+++.|.++++++++.+.   |+.+++
T Consensus       170 ~ld~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k-~~~~~tLaGs~g~it~~d~d~~~~~~iAas~---d~~~r~  245 (459)
T KOG0288|consen  170 VLDAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEK-SELISTLAGSLGNITSIDFDSDNKHVIAASN---DKNLRL  245 (459)
T ss_pred             hhhccccccceeEEccCcchhhhcchhhhhhhhhcccch-hhhhhhhhccCCCcceeeecCCCceEEeecC---CCceee
Confidence            4678999999999999999999998 9999999998644 4466678888899999999999999999987   999999


Q ss_pred             EecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCcee
Q psy14511        110 WNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERI  189 (488)
Q Consensus       110 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (488)
                      |++.+.+...++.                                                                   
T Consensus       246 Wnvd~~r~~~TLs-------------------------------------------------------------------  258 (459)
T KOG0288|consen  246 WNVDSLRLRHTLS-------------------------------------------------------------------  258 (459)
T ss_pred             eeccchhhhhhhc-------------------------------------------------------------------
Confidence            9998776443332                                                                   


Q ss_pred             ecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEE
Q psy14511        190 LEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLW  269 (488)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~  269 (488)
                                                                      + |...++++.|......++.+ +.|.+|++|
T Consensus       259 ------------------------------------------------G-HtdkVt~ak~~~~~~~vVsg-s~DRtiK~W  288 (459)
T KOG0288|consen  259 ------------------------------------------------G-HTDKVTAAKFKLSHSRVVSG-SADRTIKLW  288 (459)
T ss_pred             ------------------------------------------------c-cccceeeehhhccccceeec-cccchhhhh
Confidence                                                            2 77788888888776666666 999999999


Q ss_pred             ECCcceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeE
Q psy14511        270 HEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTV  348 (488)
Q Consensus       270 d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i  348 (488)
                      |+....+.+++- ....+..+...+..+++|-.|+.|++||.+.. .+......+. .|+++..++++..|.+++ |.++
T Consensus       289 Dl~k~~C~kt~l-~~S~cnDI~~~~~~~~SgH~DkkvRfwD~Rs~-~~~~sv~~gg-~vtSl~ls~~g~~lLsssRDdtl  365 (459)
T KOG0288|consen  289 DLQKAYCSKTVL-PGSQCNDIVCSISDVISGHFDKKVRFWDIRSA-DKTRSVPLGG-RVTSLDLSMDGLELLSSSRDDTL  365 (459)
T ss_pred             hhhhhheecccc-ccccccceEecceeeeecccccceEEEeccCC-ceeeEeecCc-ceeeEeeccCCeEEeeecCCCce
Confidence            999987777663 34556666667888999999999999999985 4555566555 799999999999998888 7999


Q ss_pred             EEEECCCCCCCccccee---------eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeecccc--EEEEEEcCCC
Q psy14511        349 KIWDFRQLDAKRPLGLI---------VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQER--ILSAVLSPDQ  417 (488)
Q Consensus       349 ~iwd~~~~~~~~~~~~~---------~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~--v~~~~~s~~~  417 (488)
                      .+.|+++.+...++...         -..|||++.|+++  |+.||.|+||++.++++...+......  |++++|+|.|
T Consensus       366 ~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaA--GS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG  443 (459)
T KOG0288|consen  366 KVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAA--GSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSG  443 (459)
T ss_pred             eeeecccccEEEEeeccccccccccceeEECCCCceeee--ccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCC
Confidence            99999988766555433         1199999999999  999999999999999999888766554  9999999999


Q ss_pred             CEEEEEeCCCcEEEEe
Q psy14511        418 TCVAAASADETISIWN  433 (488)
Q Consensus       418 ~~l~t~~~dg~v~iw~  433 (488)
                      ..|++++.++.+.+|.
T Consensus       444 ~~Llsadk~~~v~lW~  459 (459)
T KOG0288|consen  444 SGLLSADKQKAVTLWT  459 (459)
T ss_pred             chhhcccCCcceEecC
Confidence            9999999999999993

>KOG0292|consensus

Probab=100.00  E-value=2.6e-30  Score=233.90  Aligned_cols=334  Identities=14%  Similarity=0.269  Sum_probs=257.4

Q ss_pred             ecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEE
Q psy14511         32 ITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLW  110 (488)
Q Consensus        32 ~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vw  110 (488)
                      +...+..|..++|+|...++.++- .|.|++||.+-   ...+..+..|.++|..++|+|+.+.+++.|.   |..|++|
T Consensus         5 fEskSsRvKglsFHP~rPwILtslHsG~IQlWDYRM---~tli~rFdeHdGpVRgv~FH~~qplFVSGGD---DykIkVW   78 (1202)
T KOG0292|consen    5 FESKSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRM---GTLIDRFDEHDGPVRGVDFHPTQPLFVSGGD---DYKIKVW   78 (1202)
T ss_pred             hhcccccccceecCCCCCEEEEeecCceeeeehhhh---hhHHhhhhccCCccceeeecCCCCeEEecCC---ccEEEEE
Confidence            455667899999999999999987 99999999875   3456678889999999999999986555555   9999999


Q ss_pred             ecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceee
Q psy14511        111 NSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERIL  190 (488)
Q Consensus       111 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (488)
                      +..+.+++.++.+|..-+....|..                                                       
T Consensus        79 nYk~rrclftL~GHlDYVRt~~FHh-------------------------------------------------------  103 (1202)
T KOG0292|consen   79 NYKTRRCLFTLLGHLDYVRTVFFHH-------------------------------------------------------  103 (1202)
T ss_pred             ecccceehhhhccccceeEEeeccC-------------------------------------------------------
Confidence            9999999998888844332222211                                                       


Q ss_pred             cCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEE
Q psy14511        191 EAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWH  270 (488)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d  270 (488)
                                      ...-+++++.|.+|++|+..+++++..++.   |...|.|..|+|....++++ +-|.+|++||
T Consensus       104 ----------------eyPWIlSASDDQTIrIWNwqsr~~iavltG---HnHYVMcAqFhptEDlIVSa-SLDQTVRVWD  163 (1202)
T KOG0292|consen  104 ----------------EYPWILSASDDQTIRIWNWQSRKCIAVLTG---HNHYVMCAQFHPTEDLIVSA-SLDQTVRVWD  163 (1202)
T ss_pred             ----------------CCceEEEccCCCeEEEEeccCCceEEEEec---CceEEEeeccCCccceEEEe-cccceEEEEe
Confidence                            125689999999999999999999888876   99999999999998899888 9999999999


Q ss_pred             CCcce-----------------------------eeeeeccccccEEEEEecC--CEEEEeecCCeEEEEECcCCCc-cc
Q psy14511        271 EQEER-----------------------------LIQKLRTHMHQVIAMCWNG--NLLSCGTIGGNILHYDVRTHSD-YP  318 (488)
Q Consensus       271 ~~~~~-----------------------------~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~-~~  318 (488)
                      +..-+                             ....+++|...|.-++|.+  .++++|+.|+.|++|.+...+. .+
T Consensus       164 isGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKaWEv  243 (1202)
T KOG0292|consen  164 ISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEV  243 (1202)
T ss_pred             ecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEeccccceee
Confidence            75210                             1234678999999999976  8999999999999999986542 45


Q ss_pred             eeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCccccee-----eeeecCCCCEEEEEccCCCCeEEEEeC
Q psy14511        319 TAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLI-----VPKLKREGRELVTSHGKQDCSLKMWEY  392 (488)
Q Consensus       319 ~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~g~~~~~i~i~d~  392 (488)
                      .+..+|...|.++-|+|...++++.+ |++|++||+......+.++.-     +-+.+|..+++++   +.|+.+.+|.+
T Consensus       244 DtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~tfrrendRFW~laahP~lNLfAA---gHDsGm~VFkl  320 (1202)
T KOG0292|consen  244 DTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTFRRENDRFWILAAHPELNLFAA---GHDSGMIVFKL  320 (1202)
T ss_pred             hhhhcccCCcceEEecCccceeEecCCCccEEEEecccccceeeeeccCCeEEEEEecCCcceeee---ecCCceEEEEE
Confidence            66789999999999999999999999 699999999987555444322     3377899998888   45666666665


Q ss_pred             CCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccc--cccc----cCCcceEEeecCCCceEEE
Q psy14511        393 PRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKR--KARQ----VGSGSSLEFAILKQPVSLT  464 (488)
Q Consensus       393 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~--~~~~----~~~v~~~~~s~~~~~~~~~  464 (488)
                      +.-+          +..++    +++.|...- |..|+.+|+.+.+-..  ...+    ..+..++.|.|....+.++
T Consensus       321 eREr----------pa~~v----~~n~LfYvk-d~~i~~~d~~t~~d~~v~~lr~~g~~~~~~~smsYNpae~~vlic  383 (1202)
T KOG0292|consen  321 ERER----------PAYAV----NGNGLFYVK-DRFIRSYDLRTQKDTAVASLRRPGTLWQPPRSLSYNPAENAVLIC  383 (1202)
T ss_pred             cccC----------ceEEE----cCCEEEEEc-cceEEeeeccccccceeEeccCCCcccCCcceeeeccccCeEEEE
Confidence            4322          22222    344444443 8889999998855431  1222    3567788899877666554

>PLN00181 protein SPA1-RELATED; Provisional

Probab=100.00  E-value=4.1e-30  Score=254.96  Aligned_cols=268  Identities=15%  Similarity=0.272  Sum_probs=201.4

Q ss_pred             ccCCceEEEeecCCeEEEEEcccCc----cc--ceeecccCceEEEEEEcc-CCcEEEEec-CCeEEEEeccccCcCCCc
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTHS----DY--PTAITREGDVVCGLKWSP-NGRYLASGS-NNTVKIWDFRQLDAKRPQ   73 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~~----~~--~~~~~~h~~~V~~l~~sp-~g~~las~~-d~~i~vwd~~~~~~~~~~   73 (488)
                      +.||++||+|+.|+.|+|||.....    ..  +.....+...|.+++|+| ++++||+++ |++|++||+.+++   .+
T Consensus       492 s~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~---~~  568 (793)
T PLN00181        492 DRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARSQ---LV  568 (793)
T ss_pred             CCCCCEEEEEeCCCEEEEEECCcccccccccccceEEecccCceeeEEeccCCCCEEEEEeCCCeEEEEECCCCe---EE
Confidence            3489999999999999999975421    11  111123446799999988 478999998 9999999998743   44


Q ss_pred             ccccccccceeEEEEec-CCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeee
Q psy14511         74 VNNQCHLSAVKAIAWCP-WEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFE  152 (488)
Q Consensus        74 ~~~~~h~~~v~~l~~~~-~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (488)
                      ..+.+|.+.|++++|+| ++.+|++++.   |++|++||+.++..+..+..+. .                         
T Consensus       569 ~~~~~H~~~V~~l~~~p~~~~~L~Sgs~---Dg~v~iWd~~~~~~~~~~~~~~-~-------------------------  619 (793)
T PLN00181        569 TEMKEHEKRVWSIDYSSADPTLLASGSD---DGSVKLWSINQGVSIGTIKTKA-N-------------------------  619 (793)
T ss_pred             EEecCCCCCEEEEEEcCCCCCEEEEEcC---CCEEEEEECCCCcEEEEEecCC-C-------------------------
Confidence            55678999999999997 5655555554   9999999998887665543221 0                         


Q ss_pred             ccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeee---CCCcEEEEECCCeEEEEECCCCc
Q psy14511        153 IDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDW---GYHDTLAVALDTSVYTWNTKTNK  229 (488)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~d~~v~iw~~~~~~  229 (488)
                                                                      +.++.|   ++..+++++.|+.|++||+....
T Consensus       620 ------------------------------------------------v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~  651 (793)
T PLN00181        620 ------------------------------------------------ICCVQFPSESGRSLAFGSADHKVYYYDLRNPK  651 (793)
T ss_pred             ------------------------------------------------eEEEEEeCCCCCEEEEEeCCCeEEEEECCCCC
Confidence                                                            111222   13457778899999999998765


Q ss_pred             eEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCc------ceeeeeeccccccEEEEEe--cCCEEEEee
Q psy14511        230 TQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE------ERLIQKLRTHMHQVIAMCW--NGNLLSCGT  301 (488)
Q Consensus       230 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~------~~~~~~~~~~~~~v~~~~~--~~~~l~~~~  301 (488)
                      .. ...+.+ |...|.++.|. ++.+++++ +.|+.|++||+..      ...+..+.+|...+..+++  ++++|++|+
T Consensus       652 ~~-~~~~~~-h~~~V~~v~f~-~~~~lvs~-s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs  727 (793)
T PLN00181        652 LP-LCTMIG-HSKTVSYVRFV-DSSTLVSS-STDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGS  727 (793)
T ss_pred             cc-ceEecC-CCCCEEEEEEe-CCCEEEEE-ECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEe
Confidence            21 122234 88899999997 67788888 8999999999974      2567788899998888888  689999999


Q ss_pred             cCCeEEEEECcCCCccc------------eeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEEC
Q psy14511        302 IGGNILHYDVRTHSDYP------------TAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDF  353 (488)
Q Consensus       302 ~dg~i~i~d~~~~~~~~------------~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~  353 (488)
                      .|+.+++|+........            .....+...|.+++|+|++..|++++ +|.|+||++
T Consensus       728 ~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~~dG~I~i~~~  792 (793)
T PLN00181        728 ETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAANSTGNIKILEM  792 (793)
T ss_pred             CCCEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCCeEEEecCCCcEEEEec
Confidence            99999999976542110            01234556799999999999999998 599999986

>KOG0289|consensus

Probab=99.98  E-value=8.2e-30  Score=212.45  Aligned_cols=270  Identities=17%  Similarity=0.263  Sum_probs=225.0

Q ss_pred             ceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCccccccccccee
Q psy14511          6 NLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVK   84 (488)
Q Consensus         6 ~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~   84 (488)
                      ..+++|+.|..+.++|...++ +..++.||...|+.+.|+|+...+++++ |..|+||......   .......|.++|+
T Consensus       232 ~~ilTGG~d~~av~~d~~s~q-~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s---~~~~~~~h~~~V~  307 (506)
T KOG0289|consen  232 SKILTGGEDKTAVLFDKPSNQ-ILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSS---EPTSSRPHEEPVT  307 (506)
T ss_pred             CcceecCCCCceEEEecchhh-hhhhccCcceEEEEEEeccchhheeecCCcceEEeecccccc---Cccccccccccce
Confidence            678899999999999999888 5578999999999999999999999998 9999999987643   3344677999999


Q ss_pred             EEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccc
Q psy14511         85 AIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKR  164 (488)
Q Consensus        85 ~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (488)
                      .+..+|.|+|+++++.   |++..+.|++++..+.....                                         
T Consensus       308 ~ls~h~tgeYllsAs~---d~~w~Fsd~~~g~~lt~vs~-----------------------------------------  343 (506)
T KOG0289|consen  308 GLSLHPTGEYLLSASN---DGTWAFSDISSGSQLTVVSD-----------------------------------------  343 (506)
T ss_pred             eeeeccCCcEEEEecC---CceEEEEEccCCcEEEEEee-----------------------------------------
Confidence            9999999999999987   99999999988875432211                                         


Q ss_pred             cccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCce
Q psy14511        165 TVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYI  244 (488)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i  244 (488)
                                                                                              .. ..-.+
T Consensus       344 ------------------------------------------------------------------------~~-s~v~~  350 (506)
T KOG0289|consen  344 ------------------------------------------------------------------------ET-SDVEY  350 (506)
T ss_pred             ------------------------------------------------------------------------cc-cccee
Confidence                                                                                    01 34468


Q ss_pred             EEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeee
Q psy14511        245 SCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAIT  322 (488)
Q Consensus       245 ~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~  322 (488)
                      ++.+|+|||..+.++ ..|+.|++||+..+..+..+.+|.++|.+++|  +|.++++++.|+.|++||++..+.......
T Consensus       351 ts~~fHpDgLifgtg-t~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l  429 (506)
T KOG0289|consen  351 TSAAFHPDGLIFGTG-TPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQL  429 (506)
T ss_pred             EEeeEcCCceEEecc-CCCceEEEEEcCCccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeec
Confidence            999999999888888 99999999999999999999999999999999  789999999999999999998764444444


Q ss_pred             cCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEE
Q psy14511        323 REGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEEL  401 (488)
Q Consensus       323 ~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~  401 (488)
                      ....++.++.|.+.|++|+.++ +=.|++++-.+                                     ++..++..+
T Consensus       430 ~~~~~v~s~~fD~SGt~L~~~g~~l~Vy~~~k~~-------------------------------------k~W~~~~~~  472 (506)
T KOG0289|consen  430 DEKKEVNSLSFDQSGTYLGIAGSDLQVYICKKKT-------------------------------------KSWTEIKEL  472 (506)
T ss_pred             cccccceeEEEcCCCCeEEeecceeEEEEEeccc-------------------------------------ccceeeehh
Confidence            4445799999999999999885 23333333221                                     234566777


Q ss_pred             eeccccEEEEEEcCCCCEEEEEeCCCcEEEEec
Q psy14511        402 KIHQERILSAVLSPDQTCVAAASADETISIWNC  434 (488)
Q Consensus       402 ~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~  434 (488)
                      ..|.+..+.+.|..+.++++++|.|..++++.+
T Consensus       473 ~~~sg~st~v~Fg~~aq~l~s~smd~~l~~~a~  505 (506)
T KOG0289|consen  473 ADHSGLSTGVRFGEHAQYLASTSMDAILRLYAL  505 (506)
T ss_pred             hhcccccceeeecccceEEeeccchhheEEeec
Confidence            788888999999999999999999999988865

>KOG0275|consensus

Probab=99.98  E-value=2.1e-31  Score=214.01  Aligned_cols=272  Identities=20%  Similarity=0.301  Sum_probs=227.1

Q ss_pred             CccCCceEEEeecCCeEEEEEcccCcccce-------eecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCC
Q psy14511          1 MCWNGNLLSCGTIGGNILHYDVRTHSDYPT-------AITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRP   72 (488)
Q Consensus         1 ~~~dg~~la~g~~dg~i~iwd~~~~~~~~~-------~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~   72 (488)
                      |++||++|++|+.||-|.+||..+++....       .+--+.++|.|+.||.|...||+|+ ||.|+||.+.++.+.+.
T Consensus       221 FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~ClRr  300 (508)
T KOG0275|consen  221 FSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQCLRR  300 (508)
T ss_pred             eCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEecchHHHH
Confidence            567999999999999999999998873211       1234678999999999999999999 99999999999876654


Q ss_pred             cccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeee
Q psy14511         73 QVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFE  152 (488)
Q Consensus        73 ~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (488)
                      .  -..|+..|+++.|+.|+..+++++-   |.++++.-+.+|+++..+.+++..+....+..+                
T Consensus       301 F--drAHtkGvt~l~FSrD~SqiLS~sf---D~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~d----------------  359 (508)
T KOG0275|consen  301 F--DRAHTKGVTCLSFSRDNSQILSASF---DQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDD----------------  359 (508)
T ss_pred             h--hhhhccCeeEEEEccCcchhhcccc---cceEEEeccccchhHHHhcCccccccceEEcCC----------------
Confidence            4  2479999999999999999998886   999999999999999999999765555444332                


Q ss_pred             ccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEE
Q psy14511        153 IDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQL  232 (488)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~  232 (488)
                                                                             +..+++++.||+|++|+..+.++..
T Consensus       360 -------------------------------------------------------G~~iisaSsDgtvkvW~~KtteC~~  384 (508)
T KOG0275|consen  360 -------------------------------------------------------GHHIISASSDGTVKVWHGKTTECLS  384 (508)
T ss_pred             -------------------------------------------------------CCeEEEecCCccEEEecCcchhhhh
Confidence                                                                   3679999999999999999999999


Q ss_pred             EEecCCCCCCceEEEEEcCCC-CeEEEEeCCCCcEEEEECCcceeeeeeccc---ccc-EE-EEEecCCEEEEeecCCeE
Q psy14511        233 LVEYPTYDNAYISCVAWKPRT-TDLAVTNTCTEYIDLWHEQEERLIQKLRTH---MHQ-VI-AMCWNGNLLSCGTIGGNI  306 (488)
Q Consensus       233 ~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~---~~~-v~-~~~~~~~~l~~~~~dg~i  306 (488)
                      .+...+ ...+|+.+..-|.. ..++++ ....++.+.+++. +.++.+...   .+. |. +++..|.++.+.++|+.+
T Consensus       385 Tfk~~~-~d~~vnsv~~~PKnpeh~iVC-Nrsntv~imn~qG-QvVrsfsSGkREgGdFi~~~lSpkGewiYcigED~vl  461 (508)
T KOG0275|consen  385 TFKPLG-TDYPVNSVILLPKNPEHFIVC-NRSNTVYIMNMQG-QVVRSFSSGKREGGDFINAILSPKGEWIYCIGEDGVL  461 (508)
T ss_pred             hccCCC-CcccceeEEEcCCCCceEEEE-cCCCeEEEEeccc-eEEeeeccCCccCCceEEEEecCCCcEEEEEccCcEE
Confidence            988877 88889999888865 566666 8999999999864 677776432   222 32 334479999999999999


Q ss_pred             EEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEE
Q psy14511        307 LHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWD  352 (488)
Q Consensus       307 ~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd  352 (488)
                      +.+...++ .....+.-|...+..++-+|..+.||+-+ ||.+++|.
T Consensus       462 YCF~~~sG-~LE~tl~VhEkdvIGl~HHPHqNllAsYsEDgllKLWk  507 (508)
T KOG0275|consen  462 YCFSVLSG-KLERTLPVHEKDVIGLTHHPHQNLLASYSEDGLLKLWK  507 (508)
T ss_pred             EEEEeecC-ceeeeeecccccccccccCcccchhhhhcccchhhhcC
Confidence            99999986 47788888998899999999999999988 69999984

>KOG1063|consensus

Probab=99.98  E-value=2.2e-28  Score=215.71  Aligned_cols=438  Identities=15%  Similarity=0.222  Sum_probs=284.8

Q ss_pred             CceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCc---EEEEec-CCeEEEEeccccCcCCCcccccccc
Q psy14511          5 GNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGR---YLASGS-NNTVKIWDFRQLDAKRPQVNNQCHL   80 (488)
Q Consensus         5 g~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~---~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~   80 (488)
                      +..+|.| ....|.+||..... +...+.||.++|+|+.|-|+..   ++++|+ |+.|.+|.++. +....+..+.+|.
T Consensus        25 ~~~vafG-a~~~Iav~dp~k~~-i~t~l~GH~a~VnC~~~l~~s~~~a~~vsG~sD~~v~lW~l~~-~~~~~i~~~~g~~  101 (764)
T KOG1063|consen   25 GGLVAFG-AGPAIAVADPEKIL-IVTTLDGHVARVNCVHWLPTSEIVAEMVSGDSDGRVILWKLRD-EYLIKIYTIQGHC  101 (764)
T ss_pred             cceEEec-CCceEEEeCcccce-eEEeccCCccceEEEEEcccccccceEEEccCCCcEEEEEEee-hheEEEEeecCcc
Confidence            3455554 47789999988764 5678999999999999999887   888987 99999999983 3455666677777


Q ss_pred             cceeEEEEecCCCeEEee-eCCcccceEEEEecCCCe--eeeeeecCCCccccccccccccccceeEEEEEeeeeccccc
Q psy14511         81 SAVKAIAWCPWEPTLLAT-GGGICDQTVRLWNSMNGK--EKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKK  157 (488)
Q Consensus        81 ~~v~~l~~~~~~~~l~~~-~~~~~d~~i~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (488)
                      ..+.++.  ... ...++ +.   |+++.+||.+..+  +...+..........++..-+......++..  + ......
T Consensus       102 ~~~~cv~--a~~-~~~~~~~a---d~~v~vw~~~~~e~~~~~~~rf~~k~~ipLcL~~~~~~~~~lla~G--g-s~~~v~  172 (764)
T KOG1063|consen  102 KECVCVV--ARS-SVMTCKAA---DGTVSVWDKQQDEVFLLAVLRFEIKEAIPLCLAALKNNKTFLLACG--G-SKFVVD  172 (764)
T ss_pred             eeEEEEE--eee-eEEEeecc---CceEEEeecCCCceeeehheehhhhhHhhHHHhhhccCCcEEEEec--C-cceEEE
Confidence            6666654  222 23333 34   9999999985444  2222222222222222222221222222211  0 000000


Q ss_pred             eeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC---C-C-cEEEEECCCeEEEEECCCCc---
Q psy14511        158 VLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG---Y-H-DTLAVALDTSVYTWNTKTNK---  229 (488)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~-~~~~~~~d~~v~iw~~~~~~---  229 (488)
                      +....   .........+....                   ..+..+.|.   . . .+++++.|..|++|.+.-+.   
T Consensus       173 ~~s~~---~d~f~~v~el~GH~-------------------DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~  230 (764)
T KOG1063|consen  173 LYSSS---ADSFARVAELEGHT-------------------DWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDED  230 (764)
T ss_pred             EeccC---CcceeEEEEeeccc-------------------hhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCcc
Confidence            00000   00000000111110                   111222221   1 2 23445589999999865322   


Q ss_pred             ------------------eEEEEe--------cCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcc--eee----
Q psy14511        230 ------------------TQLLVE--------YPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEE--RLI----  277 (488)
Q Consensus       230 ------------------~~~~~~--------~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~--~~~----  277 (488)
                                        ....+.        +.| |...|+++.|+|.+..|+++ +.|.++.+|.....  --+    
T Consensus       231 ~~~~e~~~t~~~~~~~f~~l~~i~~~is~eall~G-HeDWV~sv~W~p~~~~LLSA-SaDksmiiW~pd~~tGiWv~~vR  308 (764)
T KOG1063|consen  231 SNEREDSLTTLSNLPVFMILEEIQYRISFEALLMG-HEDWVYSVWWHPEGLDLLSA-SADKSMIIWKPDENTGIWVDVVR  308 (764)
T ss_pred             ccccccccccccCCceeeeeeeEEEEEehhhhhcC-cccceEEEEEccchhhheec-ccCcceEEEecCCccceEEEEEE
Confidence                              000111        125 99999999999999889998 99999999976653  111    


Q ss_pred             -eeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCC--ccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEE
Q psy14511        278 -QKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHS--DYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIW  351 (488)
Q Consensus       278 -~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iw  351 (488)
                       ..+.+.........|  +++.+++-+..|..++|......  .....+.+|.+.|..++|+|.|++|.+.+ |.+-|+|
T Consensus       309 lGe~gg~a~GF~g~lw~~n~~~ii~~g~~Gg~hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlF  388 (764)
T KOG1063|consen  309 LGEVGGSAGGFWGGLWSPNSNVIIAHGRTGGFHLWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLF  388 (764)
T ss_pred             eecccccccceeeEEEcCCCCEEEEecccCcEEEEeccCccceeeccccccccccceeeeecCCCCEEEEeccccceeee
Confidence             122233445666667  67889999999999999943322  34456789999999999999999999988 7777776


Q ss_pred             ECCCCCC--------------------Cc------------cccee----------------------------------
Q psy14511        352 DFRQLDA--------------------KR------------PLGLI----------------------------------  365 (488)
Q Consensus       352 d~~~~~~--------------------~~------------~~~~~----------------------------------  365 (488)
                      -.-..+.                    ..            .++.+                                  
T Consensus       389 a~wg~q~~wHEiaRPQiHGyDl~c~~~vn~~~~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLG  468 (764)
T KOG1063|consen  389 ARWGRQQEWHEIARPQIHGYDLTCLSFVNEDLQFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALG  468 (764)
T ss_pred             cccccccceeeecccccccccceeeehccCCceeeecccceeeeeecCcHHHHHHHHHHhCccccCchhccccccccccc
Confidence            5431100                    00            00000                                  


Q ss_pred             -------------------------------------------------------------eeeecCCCCEEEEEccCC-
Q psy14511        366 -------------------------------------------------------------VPKLKREGRELVTSHGKQ-  383 (488)
Q Consensus       366 -------------------------------------------------------------~~~~~~~~~~l~~~~g~~-  383 (488)
                                                                                   ..+.+|+++.+++++-+. 
T Consensus       469 LSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~  548 (764)
T KOG1063|consen  469 LSNKAFFPGETNTGGEAAVCAETPLAAAPCELTEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSL  548 (764)
T ss_pred             ccCCCCcccccccccccceeeecccccCchhccCCChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCC
Confidence                                                                         127889999999963322 


Q ss_pred             --CCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcc-----ccccccCCcceEEeec
Q psy14511        384 --DCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKK-----RKARQVGSGSSLEFAI  456 (488)
Q Consensus       384 --~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~-----~~~~~~~~v~~~~~s~  456 (488)
                        -..|++|+..+....+.+.+|+-.|+.++|||||++|++.|.|.++.+|+.......     ....|..-|....|+|
T Consensus       549 ~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~p  628 (764)
T KOG1063|consen  549 KEHAVIRLWNTANWLQVQELEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSP  628 (764)
T ss_pred             ccceEEEEEeccchhhhheecccceEEEEEEECCCCcEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCc
Confidence              245999999999888999999999999999999999999999999999998654432     2467888899999999


Q ss_pred             CCCceEEEEeeecccccceeeEEEEeecc
Q psy14511        457 LKQPVSLTALLRSRAVEKQQHAIAYTVFG  485 (488)
Q Consensus       457 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~g  485 (488)
                      ++..|       +.++-|....+|..+++
T Consensus       629 de~~F-------aTaSRDK~VkVW~~~~~  650 (764)
T KOG1063|consen  629 DEKYF-------ATASRDKKVKVWEEPDL  650 (764)
T ss_pred             cccee-------EEecCCceEEEEeccCc
Confidence            99987       56777888888877766

>KOG1407|consensus

Probab=99.97  E-value=1.9e-29  Score=196.53  Aligned_cols=268  Identities=18%  Similarity=0.266  Sum_probs=215.9

Q ss_pred             cccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecC--CCccccccccccccccceeEEEEEeeee
Q psy14511         75 NNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTD--SQQANDETISYREQKKRRHLSFLLHGFE  152 (488)
Q Consensus        75 ~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (488)
                      .+++|.+.|.+++|+.+|..|++.+.   |+++.+|+++..+........  ...+..                      
T Consensus        15 ~~~~~~~~v~Sv~wn~~g~~lasgs~---dktv~v~n~e~~r~~~~~~~~gh~~svdq----------------------   69 (313)
T KOG1407|consen   15 ELQGHVQKVHSVAWNCDGTKLASGSF---DKTVSVWNLERDRFRKELVYRGHTDSVDQ----------------------   69 (313)
T ss_pred             HhhhhhhcceEEEEcccCceeeeccc---CCceEEEEecchhhhhhhcccCCCcchhh----------------------
Confidence            46779999999999999998777666   999999999877544333222  111111                      


Q ss_pred             ccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeee---CCCcEEEEECCCeEEEEECCCCc
Q psy14511        153 IDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDW---GYHDTLAVALDTSVYTWNTKTNK  229 (488)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~d~~v~iw~~~~~~  229 (488)
                                                                         +.|   +++.+++++.|.+|++||.+.++
T Consensus        70 ---------------------------------------------------l~w~~~~~d~~atas~dk~ir~wd~r~~k   98 (313)
T KOG1407|consen   70 ---------------------------------------------------LCWDPKHPDLFATASGDKTIRIWDIRSGK   98 (313)
T ss_pred             ---------------------------------------------------heeCCCCCcceEEecCCceEEEEEeccCc
Confidence                                                               222   24788999999999999999999


Q ss_pred             eEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEE
Q psy14511        230 TQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNIL  307 (488)
Q Consensus       230 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~  307 (488)
                      +......    ...-.-+.|+|+|.+++++ +.|..|...|.++.+.....+ ....+..++|  ++++++.-...|.|.
T Consensus        99 ~~~~i~~----~~eni~i~wsp~g~~~~~~-~kdD~it~id~r~~~~~~~~~-~~~e~ne~~w~~~nd~Fflt~GlG~v~  172 (313)
T KOG1407|consen   99 CTARIET----KGENINITWSPDGEYIAVG-NKDDRITFIDARTYKIVNEEQ-FKFEVNEISWNNSNDLFFLTNGLGCVE  172 (313)
T ss_pred             EEEEeec----cCcceEEEEcCCCCEEEEe-cCcccEEEEEecccceeehhc-ccceeeeeeecCCCCEEEEecCCceEE
Confidence            8888774    3344468899999999999 999999999999876665553 4556777888  567777777789999


Q ss_pred             EEECcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeE
Q psy14511        308 HYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSL  387 (488)
Q Consensus       308 i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i  387 (488)
                      |...... +++..+..|.....++.|+|+|+++|+|+                                      .|..+
T Consensus       173 ILsypsL-kpv~si~AH~snCicI~f~p~GryfA~Gs--------------------------------------ADAlv  213 (313)
T KOG1407|consen  173 ILSYPSL-KPVQSIKAHPSNCICIEFDPDGRYFATGS--------------------------------------ADALV  213 (313)
T ss_pred             EEecccc-ccccccccCCcceEEEEECCCCceEeecc--------------------------------------cccee
Confidence            9998865 57889999999999999999999999886                                      34444


Q ss_pred             EEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccccccccCCcceEEeecCCCceEE
Q psy14511        388 KMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKARQVGSGSSLEFAILKQPVSL  463 (488)
Q Consensus       388 ~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~  463 (488)
                      .+||+...-+++.+..+.-+|..+.||.||++||+||+|-.|-|=++++|.......+.++...++|+|....+++
T Consensus       214 SLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~vetGd~~~eI~~~~~t~tVAWHPk~~LLAy  289 (313)
T KOG1407|consen  214 SLWDVDELICERCISRLDWPVRTLSFSHDGRMLASASEDHFIDIAEVETGDRVWEIPCEGPTFTVAWHPKRPLLAY  289 (313)
T ss_pred             eccChhHhhhheeeccccCceEEEEeccCcceeeccCccceEEeEecccCCeEEEeeccCCceeEEecCCCceeeE
Confidence            5555555566778888899999999999999999999999999999999999999999999999999996665544

>PTZ00421 coronin; Provisional

Probab=99.97  E-value=3.9e-29  Score=228.77  Aligned_cols=236  Identities=14%  Similarity=0.266  Sum_probs=177.0

Q ss_pred             ccCCceEEEeecCCeEEEEEcccCccc------------ceeecccCceEEEEEEcc-CCcEEEEec-CCeEEEEecccc
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTHSDY------------PTAITREGDVVCGLKWSP-NGRYLASGS-NNTVKIWDFRQL   67 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~~~~------------~~~~~~h~~~V~~l~~sp-~g~~las~~-d~~i~vwd~~~~   67 (488)
                      +||+..+++++.+.....|+...+..+            ...+.+|.+.|.+++|+| ++++||+|+ |++|++||+.+.
T Consensus        29 ~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~  108 (493)
T PTZ00421         29 LWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEE  108 (493)
T ss_pred             cCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCC
Confidence            578666676676777777765432211            124679999999999999 889999998 999999999764


Q ss_pred             Cc----CCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCcccccccccccccccee
Q psy14511         68 DA----KRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRH  143 (488)
Q Consensus        68 ~~----~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (488)
                      ..    ..++..+.+|...|.+++|+|++..++++++.  |++|++||+.+++....+                      
T Consensus       109 ~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~--DgtVrIWDl~tg~~~~~l----------------------  164 (493)
T PTZ00421        109 GLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGA--DMVVNVWDVERGKAVEVI----------------------  164 (493)
T ss_pred             ccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeC--CCEEEEEECCCCeEEEEE----------------------
Confidence            31    13455678999999999999987544555443  999999999876532211                      


Q ss_pred             EEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEE
Q psy14511        144 LSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTW  223 (488)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw  223 (488)
                                                                                                      
T Consensus       165 --------------------------------------------------------------------------------  164 (493)
T PTZ00421        165 --------------------------------------------------------------------------------  164 (493)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccE-EEEEe--cCCEEEEe
Q psy14511        224 NTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQV-IAMCW--NGNLLSCG  300 (488)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v-~~~~~--~~~~l~~~  300 (488)
                                   .+ |...|.+++|+|++..|+++ +.|+.|++||+++++.+..+.+|.... ..+.|  ++..++++
T Consensus       165 -------------~~-h~~~V~sla~spdG~lLatg-s~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~  229 (493)
T PTZ00421        165 -------------KC-HSDQITSLEWNLDGSLLCTT-SKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIITL  229 (493)
T ss_pred             -------------cC-CCCceEEEEEECCCCEEEEe-cCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEEEE
Confidence                         11 67789999999999999999 999999999999999988888887653 34455  45566654


Q ss_pred             e----cCCeEEEEECcCCCccceeeecC-CccEEEEEEccCCcEEEEEe--cCeEEEEECCCC
Q psy14511        301 T----IGGNILHYDVRTHSDYPTAITRE-GDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQL  356 (488)
Q Consensus       301 ~----~dg~i~i~d~~~~~~~~~~~~~~-~~~i~~~~~s~~~~~l~~~~--d~~i~iwd~~~~  356 (488)
                      +    .|+.|++||+++...+......+ ...+....|++++++|++++  |+.|++||+.++
T Consensus       230 G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~  292 (493)
T PTZ00421        230 GCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNE  292 (493)
T ss_pred             ecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCC
Confidence            3    47899999998765454444333 34466677899999888776  689999998865

>KOG0283|consensus

Probab=99.97  E-value=3.9e-30  Score=232.44  Aligned_cols=171  Identities=18%  Similarity=0.412  Sum_probs=129.2

Q ss_pred             ECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcC-CCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe-
Q psy14511        215 ALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKP-RTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW-  292 (488)
Q Consensus       215 ~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~-  292 (488)
                      +.|.+|++|++...+++..+.    |...|+|++|+| |.+++++| +-||.++||++...+.+.-... ..-|+++++ 
T Consensus       387 SMDKTVRLWh~~~~~CL~~F~----HndfVTcVaFnPvDDryFiSG-SLD~KvRiWsI~d~~Vv~W~Dl-~~lITAvcy~  460 (712)
T KOG0283|consen  387 SMDKTVRLWHPGRKECLKVFS----HNDFVTCVAFNPVDDRYFISG-SLDGKVRLWSISDKKVVDWNDL-RDLITAVCYS  460 (712)
T ss_pred             cccccEEeecCCCcceeeEEe----cCCeeEEEEecccCCCcEeec-ccccceEEeecCcCeeEeehhh-hhhheeEEec
Confidence            344444444444444555555    999999999999 55777777 9999999999988666555544 478899998 


Q ss_pred             -cCCEEEEeecCCeEEEEECcCCCcccee-e-------ecCCccEEEEEEccCC--cEEEEEecCeEEEEECCCCCCCcc
Q psy14511        293 -NGNLLSCGTIGGNILHYDVRTHSDYPTA-I-------TREGDVVCGLKWSPNG--RYLASGSNNTVKIWDFRQLDAKRP  361 (488)
Q Consensus       293 -~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~-------~~~~~~i~~~~~s~~~--~~l~~~~d~~i~iwd~~~~~~~~~  361 (488)
                       ||+..++|+.+|..++|+....+..... +       ..|. .|+.+.|.|..  +.|++..|..|+|||.++.+....
T Consensus       461 PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~-rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~K  539 (712)
T KOG0283|consen  461 PDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGK-RITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHK  539 (712)
T ss_pred             cCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCc-eeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhh
Confidence             8999999999999999999865421111 1       1123 79999999854  377777799999999987766555


Q ss_pred             ccee-------eeeecCCCCEEEEEccCCCCeEEEEeCCC
Q psy14511        362 LGLI-------VPKLKREGRELVTSHGKQDCSLKMWEYPR  394 (488)
Q Consensus       362 ~~~~-------~~~~~~~~~~l~~~~g~~~~~i~i~d~~~  394 (488)
                      +..+       ...|+.||+++++  +++|..|++|+...
T Consensus       540 fKG~~n~~SQ~~Asfs~Dgk~IVs--~seDs~VYiW~~~~  577 (712)
T KOG0283|consen  540 FKGFRNTSSQISASFSSDGKHIVS--ASEDSWVYIWKNDS  577 (712)
T ss_pred             hcccccCCcceeeeEccCCCEEEE--eecCceEEEEeCCC
Confidence            5544       2389999999999  68999999999854

>KOG1063|consensus

Probab=99.97  E-value=5.5e-29  Score=219.43  Aligned_cols=376  Identities=18%  Similarity=0.205  Sum_probs=272.8

Q ss_pred             eEEEeecCCeEEEEEcccCc-ccceeecccCceEEEEEEccCCc---EEEEec-CCeEEEEeccccCcC-----------
Q psy14511          7 LLSCGTIGGNILHYDVRTHS-DYPTAITREGDVVCGLKWSPNGR---YLASGS-NNTVKIWDFRQLDAK-----------   70 (488)
Q Consensus         7 ~la~g~~dg~i~iwd~~~~~-~~~~~~~~h~~~V~~l~~sp~g~---~las~~-d~~i~vwd~~~~~~~-----------   70 (488)
                      ++|.|+.+..|.++.-...+ .....+.||.+.|.+++|...+.   +||+++ |..|+||.+.-....           
T Consensus       161 lla~Ggs~~~v~~~s~~~d~f~~v~el~GH~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~  240 (764)
T KOG1063|consen  161 LLACGGSKFVVDLYSSSADSFARVAELEGHTDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTT  240 (764)
T ss_pred             EEEecCcceEEEEeccCCcceeEEEEeeccchhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCcccccccccccc
Confidence            56788888888888765332 12345789999999999987544   788888 999999987532200           


Q ss_pred             -------CCc----------ccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCe--eeeeeecCCCccccc
Q psy14511         71 -------RPQ----------VNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGK--EKCHVKTDSQQANDE  131 (488)
Q Consensus        71 -------~~~----------~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~--~~~~~~~~~~~~~~~  131 (488)
                             ...          ..+.||...|.++.|+|.+..|++++.   |.++.+|...+..  -+.........    
T Consensus       241 ~~~~~~f~~l~~i~~~is~eall~GHeDWV~sv~W~p~~~~LLSASa---DksmiiW~pd~~tGiWv~~vRlGe~g----  313 (764)
T KOG1063|consen  241 LSNLPVFMILEEIQYRISFEALLMGHEDWVYSVWWHPEGLDLLSASA---DKSMIIWKPDENTGIWVDVVRLGEVG----  313 (764)
T ss_pred             ccCCceeeeeeeEEEEEehhhhhcCcccceEEEEEccchhhheeccc---CcceEEEecCCccceEEEEEEeeccc----
Confidence                   000          124589999999999999988888887   9999999876442  22222211000    


Q ss_pred             cccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCC--C
Q psy14511        132 TISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGY--H  209 (488)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  209 (488)
                                                                                      ..........|++  +
T Consensus       314 ----------------------------------------------------------------g~a~GF~g~lw~~n~~  329 (764)
T KOG1063|consen  314 ----------------------------------------------------------------GSAGGFWGGLWSPNSN  329 (764)
T ss_pred             ----------------------------------------------------------------ccccceeeEEEcCCCC
Confidence                                                                            0000111233333  3


Q ss_pred             cEEEEECCCeEEEEECCC-CceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcc----eeeeeecccc
Q psy14511        210 DTLAVALDTSVYTWNTKT-NKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEE----RLIQKLRTHM  284 (488)
Q Consensus       210 ~~~~~~~d~~v~iw~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~----~~~~~~~~~~  284 (488)
                      .+++-+..|..++|.... ..........| |...|+.++|+|.|.+|++. +.|-+-|+|-.-..    -.+.+-+-|.
T Consensus       330 ~ii~~g~~Gg~hlWkt~d~~~w~~~~~iSG-H~~~V~dv~W~psGeflLsv-s~DQTTRlFa~wg~q~~wHEiaRPQiHG  407 (764)
T KOG1063|consen  330 VIIAHGRTGGFHLWKTKDKTFWTQEPVISG-HVDGVKDVDWDPSGEFLLSV-SLDQTTRLFARWGRQQEWHEIARPQIHG  407 (764)
T ss_pred             EEEEecccCcEEEEeccCccceeecccccc-ccccceeeeecCCCCEEEEe-ccccceeeecccccccceeeeccccccc
Confidence            477778999999999433 33334444455 99999999999999999999 99999999865411    1233335588


Q ss_pred             ccEEEEEe-c-CCEEEEeecCCeEEEEECcC-------------------------------------------CCc---
Q psy14511        285 HQVIAMCW-N-GNLLSCGTIGGNILHYDVRT-------------------------------------------HSD---  316 (488)
Q Consensus       285 ~~v~~~~~-~-~~~l~~~~~dg~i~i~d~~~-------------------------------------------~~~---  316 (488)
                      ..+.|+++ + ...+++|.....+|+|+...                                           +..   
T Consensus       408 yDl~c~~~vn~~~~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~  487 (764)
T KOG1063|consen  408 YDLTCLSFVNEDLQFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAV  487 (764)
T ss_pred             ccceeeehccCCceeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccce
Confidence            88999999 5 66788888888899987321                                           000   


Q ss_pred             -----------------------------cceeeecCCccEEEEEEccCCcEEEEEec------CeEEEEECCCCCCCcc
Q psy14511        317 -----------------------------YPTAITREGDVVCGLKWSPNGRYLASGSN------NTVKIWDFRQLDAKRP  361 (488)
Q Consensus       317 -----------------------------~~~~~~~~~~~i~~~~~s~~~~~l~~~~d------~~i~iwd~~~~~~~~~  361 (488)
                                                   ....+.+|.-.|.+++.+|+|+++|+++.      ..|++|+..+....+.
T Consensus       488 ~~et~~~~~p~~L~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~  567 (764)
T KOG1063|consen  488 CAETPLAAAPCELTEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQE  567 (764)
T ss_pred             eeecccccCchhccCCChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhhe
Confidence                                         11234567778999999999999999872      5699999998766664


Q ss_pred             cceee-----eeecCCCCEEEEEccCCCCeEEEEeCCCcc----eeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEE
Q psy14511        362 LGLIV-----PKLKREGRELVTSHGKQDCSLKMWEYPRLH----LIEELKIHQERILSAVLSPDQTCVAAASADETISIW  432 (488)
Q Consensus       362 ~~~~~-----~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~----~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw  432 (488)
                      +..+.     -+|||||++|++  .+.|.++.+|......    .....+.|+.-|+++.|+|++.++||+|.|..|++|
T Consensus       568 L~~HsLTVT~l~FSpdg~~LLs--vsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW  645 (764)
T KOG1063|consen  568 LEGHSLTVTRLAFSPDGRYLLS--VSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVW  645 (764)
T ss_pred             ecccceEEEEEEECCCCcEEEE--eecCceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEE
Confidence            44332     299999999999  6899999999885432    123467899999999999999999999999999999


Q ss_pred             ecCCC--Ccc---ccccccCCcceEEeecC
Q psy14511        433 NCFPR--DKK---RKARQVGSGSSLEFAIL  457 (488)
Q Consensus       433 ~~~~~--~~~---~~~~~~~~v~~~~~s~~  457 (488)
                      .....  +.+   ....++..|+.++|.|-
T Consensus       646 ~~~~~~d~~i~~~a~~~~~~aVTAv~~~~~  675 (764)
T KOG1063|consen  646 EEPDLRDKYISRFACLKFSLAVTAVAYLPV  675 (764)
T ss_pred             eccCchhhhhhhhchhccCCceeeEEeecc
Confidence            99887  333   34667888999998884

>KOG0268|consensus

Probab=99.97  E-value=7.3e-31  Score=213.75  Aligned_cols=285  Identities=20%  Similarity=0.361  Sum_probs=220.4

Q ss_pred             eecccCceEEEEEEccCC-cEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEE
Q psy14511         31 AITREGDVVCGLKWSPNG-RYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVR  108 (488)
Q Consensus        31 ~~~~h~~~V~~l~~sp~g-~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~  108 (488)
                      .|.||.+.|.|++=+|.. ..+|+|+ ||.|+|||+..   ..++..+.+|.+.|..|++..  ..++++|.   |++|+
T Consensus        61 ~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsq---R~~~~~f~AH~G~V~Gi~v~~--~~~~tvgd---DKtvK  132 (433)
T KOG0268|consen   61 SLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQ---RECIRTFKAHEGLVRGICVTQ--TSFFTVGD---DKTVK  132 (433)
T ss_pred             hccccccccchhhcCcchhhhhhccccCceEEEEehhh---hhhhheeecccCceeeEEecc--cceEEecC---Cccee
Confidence            468999999999999987 7899998 99999999987   456667899999999999987  46788887   99999


Q ss_pred             EEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCce
Q psy14511        109 LWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPER  188 (488)
Q Consensus       109 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (488)
                      .|-++. ....++.+.+.                                                              
T Consensus       133 ~wk~~~-~p~~tilg~s~--------------------------------------------------------------  149 (433)
T KOG0268|consen  133 QWKIDG-PPLHTILGKSV--------------------------------------------------------------  149 (433)
T ss_pred             eeeccC-Ccceeeecccc--------------------------------------------------------------
Confidence            999754 23333322211                                                              


Q ss_pred             eecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEE
Q psy14511        189 ILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDL  268 (488)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i  268 (488)
                                  ...++.....-+-++....|.|||..-..++..+..   ....|.++.|+|....++.++..|+.|.+
T Consensus       150 ------------~~gIdh~~~~~~FaTcGe~i~IWD~~R~~Pv~smsw---G~Dti~svkfNpvETsILas~~sDrsIvL  214 (433)
T KOG0268|consen  150 ------------YLGIDHHRKNSVFATCGEQIDIWDEQRDNPVSSMSW---GADSISSVKFNPVETSILASCASDRSIVL  214 (433)
T ss_pred             ------------ccccccccccccccccCceeeecccccCCccceeec---CCCceeEEecCCCcchheeeeccCCceEE
Confidence                        000111111222233456799999988887777776   56679999999998877777689999999


Q ss_pred             EECCcceeeeeeccccccEEEEEec--CCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-c
Q psy14511        269 WHEQEERLIQKLRTHMHQVIAMCWN--GNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-N  345 (488)
Q Consensus       269 ~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d  345 (488)
                      ||+++..+++.+.. ...-..++|+  +-.+++|++|..++.||++....++....+|.+.|.++.|||.|+-+++|+ |
T Consensus       215 yD~R~~~Pl~KVi~-~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyD  293 (433)
T KOG0268|consen  215 YDLRQASPLKKVIL-TMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYD  293 (433)
T ss_pred             EecccCCccceeee-eccccceecCccccceeeccccccceehhhhhhcccchhhcccceeEEEeccCCCcchhcccccc
Confidence            99999888777642 3445678884  567899999999999999998889999999999999999999999999998 7


Q ss_pred             CeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeC
Q psy14511        346 NTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASA  425 (488)
Q Consensus       346 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~  425 (488)
                      .+|+||....+..                        .|    +|..          ..-..|.++.||.|.+++++||+
T Consensus       294 ksIRIf~~~~~~S------------------------Rd----iYht----------kRMq~V~~Vk~S~Dskyi~SGSd  335 (433)
T KOG0268|consen  294 KSIRIFPVNHGHS------------------------RD----IYHT----------KRMQHVFCVKYSMDSKYIISGSD  335 (433)
T ss_pred             ceEEEeecCCCcc------------------------hh----hhhH----------hhhheeeEEEEeccccEEEecCC
Confidence            8888888775411                        00    0000          01235899999999999999999


Q ss_pred             CCcEEEEecCCCCcc
Q psy14511        426 DETISIWNCFPRDKK  440 (488)
Q Consensus       426 dg~v~iw~~~~~~~~  440 (488)
                      |+.|++|.-...+.+
T Consensus       336 d~nvRlWka~Asekl  350 (433)
T KOG0268|consen  336 DGNVRLWKAKASEKL  350 (433)
T ss_pred             Ccceeeeecchhhhc
Confidence            999999997755443

>KOG0278|consensus

Probab=99.97  E-value=1.2e-30  Score=201.96  Aligned_cols=269  Identities=18%  Similarity=0.220  Sum_probs=218.4

Q ss_pred             ccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccc
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHL   80 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~   80 (488)
                      ..+|-+|++++.||.-.+-+-+++.-+ -++.+|.+.|+....+.+...-|+++ |-+-+|||.-++....   .+ .|.
T Consensus        26 tp~g~flisa~kd~~pmlr~g~tgdwi-gtfeghkgavw~~~l~~na~~aasaaadftakvw~a~tgdelh---sf-~hk  100 (334)
T KOG0278|consen   26 TPDGYFLISASKDGKPMLRNGDTGDWI-GTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDAVTGDELH---SF-EHK  100 (334)
T ss_pred             CCCceEEEEeccCCCchhccCCCCCcE-EeeeccCcceeeeecCchhhhhhhhcccchhhhhhhhhhhhhh---hh-hhh
Confidence            458999999999999999998888855 56899999999999999998999988 9999999998876443   33 388


Q ss_pred             cceeEEEEecCCCeEEeeeCCcccceEEEEecCCCee-eeeeecCCCccccccccccccccceeEEEEEeeeecccccee
Q psy14511         81 SAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKE-KCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVL  159 (488)
Q Consensus        81 ~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (488)
                      .-|.+++|+.|.++|++.+.   ++.++|+|++..+. ..++.++...+..                             
T Consensus       101 hivk~~af~~ds~~lltgg~---ekllrvfdln~p~App~E~~ghtg~Ir~-----------------------------  148 (334)
T KOG0278|consen  101 HIVKAVAFSQDSNYLLTGGQ---EKLLRVFDLNRPKAPPKEISGHTGGIRT-----------------------------  148 (334)
T ss_pred             heeeeEEecccchhhhccch---HHHhhhhhccCCCCCchhhcCCCCccee-----------------------------
Confidence            89999999999999888887   99999999976542 2233333221111                             


Q ss_pred             ccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCC
Q psy14511        160 NQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTY  239 (488)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~  239 (488)
                                                                ...+.++..+++.+.|+.||+||.+++...+.+.    
T Consensus       149 ------------------------------------------v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~----  182 (334)
T KOG0278|consen  149 ------------------------------------------VLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLE----  182 (334)
T ss_pred             ------------------------------------------EEEeccCceEEeeccCCceEEEEeccCcEEEEEe----
Confidence                                                      1123345678888999999999999999988887    


Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCcc
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDY  317 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~  317 (488)
                      .+.+++++.++++|+++.++  ..+.|..||..+-..++.++. ...|.+.+.  +...+++|++|..++.||..++...
T Consensus       183 ~~s~VtSlEvs~dG~ilTia--~gssV~Fwdaksf~~lKs~k~-P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi  259 (334)
T KOG0278|consen  183 FNSPVTSLEVSQDGRILTIA--YGSSVKFWDAKSFGLLKSYKM-PCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEI  259 (334)
T ss_pred             cCCCCcceeeccCCCEEEEe--cCceeEEeccccccceeeccC-ccccccccccCCCceEEecCcceEEEEEeccCCcee
Confidence            45689999999999888776  678899999998887777753 344544444  6789999999999999999998655


Q ss_pred             ceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCC
Q psy14511        318 PTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQL  356 (488)
Q Consensus       318 ~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~  356 (488)
                      .....+|.++|.++.|+|+|...|+|+ ||+|++|....+
T Consensus       260 ~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~  299 (334)
T KOG0278|consen  260 GSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTTPG  299 (334)
T ss_pred             eecccCCCCceEEEEECCCCceeeccCCCceEEEEEecCC
Confidence            554689999999999999999999999 699999998765

>KOG0310|consensus

Probab=99.97  E-value=2.5e-29  Score=212.87  Aligned_cols=269  Identities=17%  Similarity=0.240  Sum_probs=220.3

Q ss_pred             CceEEEEEEccCCc-EEEEecCCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCC
Q psy14511         36 GDVVCGLKWSPNGR-YLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMN  114 (488)
Q Consensus        36 ~~~V~~l~~sp~g~-~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~  114 (488)
                      .+.|.+++|||... -+|+.+.-.+.||+..+....+.+   .-....|.++.|..||+ |+++|..  .|.|+++|+.+
T Consensus        26 ~~~vssl~fsp~~P~d~aVt~S~rvqly~~~~~~~~k~~---srFk~~v~s~~fR~DG~-LlaaGD~--sG~V~vfD~k~   99 (487)
T KOG0310|consen   26 HNSVSSLCFSPKHPYDFAVTSSVRVQLYSSVTRSVRKTF---SRFKDVVYSVDFRSDGR-LLAAGDE--SGHVKVFDMKS   99 (487)
T ss_pred             cCcceeEecCCCCCCceEEecccEEEEEecchhhhhhhH---HhhccceeEEEeecCCe-EEEccCC--cCcEEEecccc
Confidence            35799999999655 467777889999998874444433   33567899999999997 5555553  89999999544


Q ss_pred             CeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCC
Q psy14511        115 GKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPS  194 (488)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (488)
                      ...++.+                                                                         
T Consensus       100 r~iLR~~-------------------------------------------------------------------------  106 (487)
T KOG0310|consen  100 RVILRQL-------------------------------------------------------------------------  106 (487)
T ss_pred             HHHHHHH-------------------------------------------------------------------------
Confidence            2211111                                                                         


Q ss_pred             ccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcc
Q psy14511        195 IINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEE  274 (488)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~  274 (488)
                                                                .. |..++..+.|+|+++.+++.|+.|+.+++||+.+.
T Consensus       107 ------------------------------------------~a-h~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a  143 (487)
T KOG0310|consen  107 ------------------------------------------YA-HQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTA  143 (487)
T ss_pred             ------------------------------------------hh-ccCceeEEEecccCCeEEEecCCCceEEEEEcCCc
Confidence                                                      11 78899999999999888887799999999999998


Q ss_pred             eeeeeeccccccEEEEEe---cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEE
Q psy14511        275 RLIQKLRTHMHQVIAMCW---NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIW  351 (488)
Q Consensus       275 ~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iw  351 (488)
                      .....+.+|...|.+.++   ++..+++|+.||.|++||++... ....-..|..+|..+.+-|.|..+|+++.+.+++|
T Consensus       144 ~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~-~~v~elnhg~pVe~vl~lpsgs~iasAgGn~vkVW  222 (487)
T KOG0310|consen  144 YVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLT-SRVVELNHGCPVESVLALPSGSLIASAGGNSVKVW  222 (487)
T ss_pred             EEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCC-ceeEEecCCCceeeEEEcCCCCEEEEcCCCeEEEE
Confidence            876688999999999999   56799999999999999999864 44555678889999999999999999988888888


Q ss_pred             ECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEE
Q psy14511        352 DFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISI  431 (488)
Q Consensus       352 d~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~i  431 (488)
                      |+.++                                      ++.+.....|...|+|+++..++..|++++-|+.|++
T Consensus       223 Dl~~G--------------------------------------~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKV  264 (487)
T KOG0310|consen  223 DLTTG--------------------------------------GQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKV  264 (487)
T ss_pred             EecCC--------------------------------------ceehhhhhcccceEEEEEeecCCceEeecccccceEE
Confidence            87654                                      3444445559999999999999999999999999999


Q ss_pred             EecCCCCccccccccCCcceEEeecCCCceEEEE
Q psy14511        432 WNCFPRDKKRKARQVGSGSSLEFAILKQPVSLTA  465 (488)
Q Consensus       432 w~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~  465 (488)
                      ||+.+-+........++|.+++.+|+++.+.+..
T Consensus       265 fd~t~~Kvv~s~~~~~pvLsiavs~dd~t~viGm  298 (487)
T KOG0310|consen  265 FDTTNYKVVHSWKYPGPVLSIAVSPDDQTVVIGM  298 (487)
T ss_pred             EEccceEEEEeeecccceeeEEecCCCceEEEec
Confidence            9999888888889999999999999999886644

>KOG0647|consensus

Probab=99.97  E-value=2.1e-28  Score=194.73  Aligned_cols=278  Identities=19%  Similarity=0.253  Sum_probs=215.1

Q ss_pred             cccCceEEEEEEcc-CCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEE
Q psy14511         33 TREGDVVCGLKWSP-NGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLW  110 (488)
Q Consensus        33 ~~h~~~V~~l~~sp-~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vw  110 (488)
                      ....+.|.+|+||| ...++++++ |++|++|++........ .....|.++|.+++|+.||..+++.+.   |+.+++|
T Consensus        24 ~pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~-ka~~~~~~PvL~v~WsddgskVf~g~~---Dk~~k~w   99 (347)
T KOG0647|consen   24 NPPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVP-KAQQSHDGPVLDVCWSDDGSKVFSGGC---DKQAKLW   99 (347)
T ss_pred             CCcccchheeEeccccCceEEecccCCceEEEEEecCCcccc-hhhhccCCCeEEEEEccCCceEEeecc---CCceEEE
Confidence            45667899999999 455666677 99999999986322222 335569999999999999987777776   9999999


Q ss_pred             ecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceee
Q psy14511        111 NSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERIL  190 (488)
Q Consensus       111 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (488)
                      |+.+++...                                                                       
T Consensus       100 DL~S~Q~~~-----------------------------------------------------------------------  108 (347)
T KOG0647|consen  100 DLASGQVSQ-----------------------------------------------------------------------  108 (347)
T ss_pred             EccCCCeee-----------------------------------------------------------------------
Confidence            998875211                                                                       


Q ss_pred             cCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCC--eEEEEeCCCCcEEE
Q psy14511        191 EAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTT--DLAVTNTCTEYIDL  268 (488)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~l~~~~~~~~~i~i  268 (488)
                                                                 +..   |..+|.++.|-+...  .|++| +.|.+|+.
T Consensus       109 -------------------------------------------v~~---Hd~pvkt~~wv~~~~~~cl~TG-SWDKTlKf  141 (347)
T KOG0647|consen  109 -------------------------------------------VAA---HDAPVKTCHWVPGMNYQCLVTG-SWDKTLKF  141 (347)
T ss_pred             -------------------------------------------eee---cccceeEEEEecCCCcceeEec-ccccceee
Confidence                                                       111   888999999887665  67777 99999999


Q ss_pred             EECCcceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCccceeee-cCCccEEEEEEccCCcEEEEEe-cC
Q psy14511        269 WHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAIT-REGDVVCGLKWSPNGRYLASGS-NN  346 (488)
Q Consensus       269 ~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~-d~  346 (488)
                      ||++...++.++. -...++++.....+++.+..++.|.+|+++++....+... ...-.+++++..+|....|.|+ +|
T Consensus       142 WD~R~~~pv~t~~-LPeRvYa~Dv~~pm~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEG  220 (347)
T KOG0647|consen  142 WDTRSSNPVATLQ-LPERVYAADVLYPMAVVATAERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEG  220 (347)
T ss_pred             cccCCCCeeeeee-ccceeeehhccCceeEEEecCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecc
Confidence            9999988888875 3677888888888999999999999999987654333222 2334578999999888888888 68


Q ss_pred             eEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeecc---------ccEEEEEEcCCC
Q psy14511        347 TVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQ---------ERILSAVLSPDQ  417 (488)
Q Consensus       347 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~---------~~v~~~~~s~~~  417 (488)
                      .+.|..+.......                                     -.+++.|.         -.|++++|+|.-
T Consensus       221 rv~iq~id~~~~~~-------------------------------------nFtFkCHR~~~~~~~~VYaVNsi~FhP~h  263 (347)
T KOG0647|consen  221 RVAIQYIDDPNPKD-------------------------------------NFTFKCHRSTNSVNDDVYAVNSIAFHPVH  263 (347)
T ss_pred             eEEEEecCCCCccC-------------------------------------ceeEEEeccCCCCCCceEEecceEeeccc
Confidence            88888887642111                                     11122221         258899999999


Q ss_pred             CEEEEEeCCCcEEEEecCCCCcccc-ccccCCcceEEeecCCCceEEEEeeecc
Q psy14511        418 TCVAAASADETISIWNCFPRDKKRK-ARQVGSGSSLEFAILKQPVSLTALLRSR  470 (488)
Q Consensus       418 ~~l~t~~~dg~v~iw~~~~~~~~~~-~~~~~~v~~~~~s~~~~~~~~~~~~~~~  470 (488)
                      ..|+|++.||++.+||-+.+..++. ..+..+|++..|..+|..+++..-+..+
T Consensus       264 gtlvTaGsDGtf~FWDkdar~kLk~s~~~~qpItcc~fn~~G~ifaYA~gYDWS  317 (347)
T KOG0647|consen  264 GTLVTAGSDGTFSFWDKDARTKLKTSETHPQPITCCSFNRNGSIFAYALGYDWS  317 (347)
T ss_pred             ceEEEecCCceEEEecchhhhhhhccCcCCCccceeEecCCCCEEEEEeecccc
Confidence            9999999999999999998887754 7889999999999999999886655443

>KOG0308|consensus

Probab=99.97  E-value=1.2e-29  Score=222.13  Aligned_cols=350  Identities=19%  Similarity=0.256  Sum_probs=250.5

Q ss_pred             CCceEEEeecCCeEEEEEcccCcc-----cceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCccccc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSD-----YPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQ   77 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~-----~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~   77 (488)
                      ++++|.+|+.||.|++|++.....     ....++.|.+.|+.++...+|+.|++++ |.+|++|+..... ..+..++.
T Consensus        36 ~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~-~~c~stir  114 (735)
T KOG0308|consen   36 NGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDN-TFCMSTIR  114 (735)
T ss_pred             CCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCc-chhHhhhh
Confidence            788999999999999999876543     2356789999999999999999999998 9999999998654 34666778


Q ss_pred             ccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCee--eeeeecCCCccccccccccccccceeEEEEEeeeeccc
Q psy14511         78 CHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKE--KCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDR  155 (488)
Q Consensus        78 ~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (488)
                      .|..-|.|++.......++++|+  .|+.|.+||++++..  +..+..  ........                      
T Consensus       115 ~H~DYVkcla~~ak~~~lvaSgG--LD~~IflWDin~~~~~l~~s~n~--~t~~sl~s----------------------  168 (735)
T KOG0308|consen  115 THKDYVKCLAYIAKNNELVASGG--LDRKIFLWDINTGTATLVASFNN--VTVNSLGS----------------------  168 (735)
T ss_pred             cccchheeeeecccCceeEEecC--CCccEEEEEccCcchhhhhhccc--cccccCCC----------------------
Confidence            89999999999433445677666  599999999998843  111111  00000000                      


Q ss_pred             cceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCC--CcEEEEECCCeEEEEECCCCceEEE
Q psy14511        156 KKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGY--HDTLAVALDTSVYTWNTKTNKTQLL  233 (488)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~v~iw~~~~~~~~~~  233 (488)
                                                            +  ....+.+++..+  ..+++|+.++.+++||.++.+.+..
T Consensus       169 --------------------------------------G--~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimk  208 (735)
T KOG0308|consen  169 --------------------------------------G--PKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMK  208 (735)
T ss_pred             --------------------------------------C--CccceeeeecCCcceEEEecCcccceEEeccccccceee
Confidence                                                  0  001111222222  2466677999999999999875544


Q ss_pred             EecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEec--CCEEEEeecCCeEEEEEC
Q psy14511        234 VEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWN--GNLLSCGTIGGNILHYDV  311 (488)
Q Consensus       234 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~  311 (488)
                      +.  + |...|.++..++||+.++++ ++||+|++||+...+++.++..|...|.++..+  =..+++|+.||.|+.-|+
T Consensus       209 Lr--G-HTdNVr~ll~~dDGt~~ls~-sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl  284 (735)
T KOG0308|consen  209 LR--G-HTDNVRVLLVNDDGTRLLSA-SSDGTIRLWDLGQQRCLATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRTDL  284 (735)
T ss_pred             ee--c-cccceEEEEEcCCCCeEeec-CCCceEEeeeccccceeeeEEeccCceEEEeeCCCcceEEecCCCCcEEeccc
Confidence            44  5 99999999999999999999 999999999999999999999999999999884  478999999999999999


Q ss_pred             cCCCccceeeecCCccEEEEEEccCCcE-EEEEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEE
Q psy14511        312 RTHSDYPTAITREGDVVCGLKWSPNGRY-LASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMW  390 (488)
Q Consensus       312 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~-l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~  390 (488)
                      ++.. ....+-....+|..+..+...+- -++..|+.|+-|-.+-..          .+++.++....   +.+......
T Consensus       285 ~n~~-~~tlick~daPv~~l~~~~~~~~~WvtTtds~I~rW~~~~~~----------~l~~s~~~~~~---~T~~~~~~~  350 (735)
T KOG0308|consen  285 RNPA-KSTLICKEDAPVLKLHLHEHDNSVWVTTTDSSIKRWKLEPDI----------ALSVSGDLDFF---STDSNNHSC  350 (735)
T ss_pred             CCch-hheEeecCCCchhhhhhccccCCceeeeccccceecCCcccc----------ccccCCCCCcc---cccCCCccc
Confidence            9863 33444445566777777654433 444458999999776331          33444444443   223333333


Q ss_pred             eCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcc
Q psy14511        391 EYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKK  440 (488)
Q Consensus       391 d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~  440 (488)
                      +... .+-..+.| ..+|...+.-.|.++++|=...|.+.+||+-.....
T Consensus       351 ~~~~-tp~~vi~G-g~ai~k~~mL~dkRhVlTkDa~gnv~lwDIl~~~~~  398 (735)
T KOG0308|consen  351 DLTN-TPDSVIPG-GAAIKKHAMLNDKRHVLTKDAKGNVALWDILACVKV  398 (735)
T ss_pred             cccC-CCceeccC-chhhhhhhhhcCcceEeeecCCCCEEEEEeeeeeeh
Confidence            3211 11122222 224556666779999999999999999999876655

>KOG2096|consensus

Probab=99.97  E-value=8.4e-29  Score=198.51  Aligned_cols=294  Identities=16%  Similarity=0.230  Sum_probs=214.2

Q ss_pred             eecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCC--CcccccccccceeEEEEecCCCeEEeeeCCcccceE
Q psy14511         31 AITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKR--PQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTV  107 (488)
Q Consensus        31 ~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~--~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i  107 (488)
                      .|.+|.+.|++++|+.||++||+++ |+.|+||+++......  .+.. .-.-+..+.+.|+||-+.+++....  ..++
T Consensus        81 ~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~-nve~dhpT~V~FapDc~s~vv~~~~--g~~l  157 (420)
T KOG2096|consen   81 VLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQ-NVEYDHPTRVVFAPDCKSVVVSVKR--GNKL  157 (420)
T ss_pred             hhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhc-cccCCCceEEEECCCcceEEEEEcc--CCEE
Confidence            5789999999999999999999998 9999999998633221  1111 1112346788999999888777763  7789


Q ss_pred             EEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCc
Q psy14511        108 RLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPE  187 (488)
Q Consensus       108 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (488)
                      ++|-+...+.     +. .                                                             
T Consensus       158 ~vyk~~K~~d-----G~-~-------------------------------------------------------------  170 (420)
T KOG2096|consen  158 CVYKLVKKTD-----GS-G-------------------------------------------------------------  170 (420)
T ss_pred             EEEEeeeccc-----CC-C-------------------------------------------------------------
Confidence            9987643321     00 0                                                             


Q ss_pred             eeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEE
Q psy14511        188 RILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYID  267 (488)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~  267 (488)
                                                   .....-||        ...++..|...+..+-....+.+|+++ +.|..|.
T Consensus       171 -----------------------------~~~~v~~D--------~~~f~~kh~v~~i~iGiA~~~k~imsa-s~dt~i~  212 (420)
T KOG2096|consen  171 -----------------------------SHHFVHID--------NLEFERKHQVDIINIGIAGNAKYIMSA-SLDTKIC  212 (420)
T ss_pred             -----------------------------Cccccccc--------ccccchhcccceEEEeecCCceEEEEe-cCCCcEE
Confidence                                         00000011        011111156667777777788899998 9999999


Q ss_pred             EEECCcceeeeeeccccc--cEEEEEecCCEEEEeecCCeEEEEECcCCC-------ccceeeecCCccEEEEEEccCCc
Q psy14511        268 LWHEQEERLIQKLRTHMH--QVIAMCWNGNLLSCGTIGGNILHYDVRTHS-------DYPTAITREGDVVCGLKWSPNGR  338 (488)
Q Consensus       268 i~d~~~~~~~~~~~~~~~--~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~-------~~~~~~~~~~~~i~~~~~s~~~~  338 (488)
                      +|+++ |+.+..+.....  .-.+++++|+++++++..-.+++|.+--.+       .....+.+|.+.|..++|+|+.+
T Consensus       213 lw~lk-Gq~L~~idtnq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~  291 (420)
T KOG2096|consen  213 LWDLK-GQLLQSIDTNQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSST  291 (420)
T ss_pred             EEecC-CceeeeeccccccccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcc
Confidence            99998 788877765443  335566699999999999999999874322       23456889999999999999999


Q ss_pred             EEEEEe-cCeEEEEECCCC----CCCccccee-----------ee-eecCCCCEEEEEccCCCCeEEEEeCCCcceeEEE
Q psy14511        339 YLASGS-NNTVKIWDFRQL----DAKRPLGLI-----------VP-KLKREGRELVTSHGKQDCSLKMWEYPRLHLIEEL  401 (488)
Q Consensus       339 ~l~~~~-d~~i~iwd~~~~----~~~~~~~~~-----------~~-~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~  401 (488)
                      .+++.+ ||+++|||.+-.    +....++..           +. ..+|.|+.|+++.   ...+++|..++++...++
T Consensus       292 r~vtvSkDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~---gs~l~~~~se~g~~~~~~  368 (420)
T KOG2096|consen  292 RAVTVSKDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSF---GSDLKVFASEDGKDYPEL  368 (420)
T ss_pred             eeEEEecCCcEEEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeec---CCceEEEEcccCccchhH
Confidence            999999 799999998632    222222222           11 8999999999954   456999999998876665


Q ss_pred             e-eccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCC
Q psy14511        402 K-IHQERILSAVLSPDQTCVAAASADETISIWNCFPR  437 (488)
Q Consensus       402 ~-~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~  437 (488)
                      + .|...|.+++|+++|++++|++ |..+++..-.++
T Consensus       369 e~~h~~~Is~is~~~~g~~~atcG-dr~vrv~~ntpg  404 (420)
T KOG2096|consen  369 EDIHSTTISSISYSSDGKYIATCG-DRYVRVIRNTPG  404 (420)
T ss_pred             HHhhcCceeeEEecCCCcEEeeec-ceeeeeecCCCc
Confidence            4 5889999999999999999997 667888764443

>PTZ00420 coronin; Provisional

Probab=99.97  E-value=2.7e-28  Score=224.13  Aligned_cols=225  Identities=15%  Similarity=0.254  Sum_probs=169.0

Q ss_pred             eecCCeEEEEEcccCcccceeecccCceEEEEEEccC-CcEEEEec-CCeEEEEeccccCcC-----CCcccccccccce
Q psy14511         11 GTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPN-GRYLASGS-NNTVKIWDFRQLDAK-----RPQVNNQCHLSAV   83 (488)
Q Consensus        11 g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~-g~~las~~-d~~i~vwd~~~~~~~-----~~~~~~~~h~~~v   83 (488)
                      |+.++.|++|+..... ....+.+|.+.|.+++|+|+ +++||+|+ |+.|+|||+.++...     .++..+.+|...|
T Consensus        50 GG~~gvI~L~~~~r~~-~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V  128 (568)
T PTZ00420         50 GGLIGAIRLENQMRKP-PVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKI  128 (568)
T ss_pred             CCceeEEEeeecCCCc-eEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcE
Confidence            5567889999987654 34568899999999999996 78999998 999999999754211     1233567899999


Q ss_pred             eEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecccc
Q psy14511         84 KAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSK  163 (488)
Q Consensus        84 ~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (488)
                      .+++|+|++..++++++.  |++|++||+.+++....+                                          
T Consensus       129 ~sVaf~P~g~~iLaSgS~--DgtIrIWDl~tg~~~~~i------------------------------------------  164 (568)
T PTZ00420        129 SIIDWNPMNYYIMCSSGF--DSFVNIWDIENEKRAFQI------------------------------------------  164 (568)
T ss_pred             EEEEECCCCCeEEEEEeC--CCeEEEEECCCCcEEEEE------------------------------------------
Confidence            999999999887766553  999999999876532111                                          


Q ss_pred             ccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCc
Q psy14511        164 RTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAY  243 (488)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~  243 (488)
                                                                                             .    +...
T Consensus       165 -----------------------------------------------------------------------~----~~~~  169 (568)
T PTZ00420        165 -----------------------------------------------------------------------N----MPKK  169 (568)
T ss_pred             -----------------------------------------------------------------------e----cCCc
Confidence                                                                                   1    3346


Q ss_pred             eEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEE-------ecCCEEEEeecCC----eEEEEECc
Q psy14511        244 ISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMC-------WNGNLLSCGTIGG----NILHYDVR  312 (488)
Q Consensus       244 i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~-------~~~~~l~~~~~dg----~i~i~d~~  312 (488)
                      |.+++|+|+|..|+++ +.|+.|++||+++++.+..+.+|.+.+....       .++.++++++.++    .|++||++
T Consensus       170 V~SlswspdG~lLat~-s~D~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr  248 (568)
T PTZ00420        170 LSSLKWNIKGNLLSGT-CVGKHMHIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLK  248 (568)
T ss_pred             EEEEEECCCCCEEEEE-ecCCEEEEEECCCCcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECC
Confidence            8999999999999888 8999999999999999999999987653322       2567888877764    79999999


Q ss_pred             CCCccceeeec--CCccEEEEEEccCCcEEEEEe-cCeEEEEECCCC
Q psy14511        313 THSDYPTAITR--EGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQL  356 (488)
Q Consensus       313 ~~~~~~~~~~~--~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~  356 (488)
                      +...++.....  +.+.+......++|.++++|. |+.|++|++...
T Consensus       249 ~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~~~  295 (568)
T PTZ00420        249 NTTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNCRYYQHSLG  295 (568)
T ss_pred             CCCCceEEEEecCCccceEEeeeCCCCCEEEEEECCCeEEEEEccCC
Confidence            75545544332  233333333345577777776 688888887643

>KOG2106|consensus

Probab=99.97  E-value=2.8e-27  Score=201.26  Aligned_cols=381  Identities=18%  Similarity=0.257  Sum_probs=256.9

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccce--eec-ccCceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCcccccccc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYPT--AIT-REGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHL   80 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~~--~~~-~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~   80 (488)
                      |.+++++.+ .|.+..|+.+.+....+  ++. ....-|.|++|.++|..+-.-++|.|.||+..+.+..+.   ...|.
T Consensus       212 d~nliit~G-k~H~~Fw~~~~~~l~k~~~~fek~ekk~Vl~v~F~engdviTgDS~G~i~Iw~~~~~~~~k~---~~aH~  287 (626)
T KOG2106|consen  212 DPNLIITCG-KGHLYFWTLRGGSLVKRQGIFEKREKKFVLCVTFLENGDVITGDSGGNILIWSKGTNRISKQ---VHAHD  287 (626)
T ss_pred             CCcEEEEeC-CceEEEEEccCCceEEEeeccccccceEEEEEEEcCCCCEEeecCCceEEEEeCCCceEEeE---eeecC
Confidence            667777766 67899999887653222  222 233679999999999876544599999999876433322   23799


Q ss_pred             cceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceec
Q psy14511         81 SAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLN  160 (488)
Q Consensus        81 ~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (488)
                      +.|.+++...+| .|++ |+.  |+.|..|| ..-+.++..+.+.+......+.....+   ++    -|..  +..++.
T Consensus       288 ggv~~L~~lr~G-tllS-GgK--DRki~~Wd-~~y~k~r~~elPe~~G~iRtv~e~~~d---i~----vGTt--rN~iL~  353 (626)
T KOG2106|consen  288 GGVFSLCMLRDG-TLLS-GGK--DRKIILWD-DNYRKLRETELPEQFGPIRTVAEGKGD---IL----VGTT--RNFILQ  353 (626)
T ss_pred             CceEEEEEecCc-cEee-cCc--cceEEecc-ccccccccccCchhcCCeeEEecCCCc---EE----Eeec--cceEEE
Confidence            999999999999 4677 553  99999999 444545544443222221111111111   00    0000  000000


Q ss_pred             cccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCC
Q psy14511        161 QSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYD  240 (488)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~  240 (488)
                      ..-                     +..-.+..........-.....+.+++++++.|+.+++|+  ..+..-...    .
T Consensus       354 Gt~---------------------~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~~k~~wt~~----~  406 (626)
T KOG2106|consen  354 GTL---------------------ENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--DHKLEWTKI----I  406 (626)
T ss_pred             eee---------------------cCCceEEEEecccceeeEEcCCChhheeeccCcceEEEcc--CCceeEEEE----e
Confidence            000                     0000000000001111122334568899999999999999  333332222    4


Q ss_pred             CCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccc
Q psy14511        241 NAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYP  318 (488)
Q Consensus       241 ~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~  318 (488)
                      ..+..|+.|+|.| .++++ +..|...+.|.++...+..-.. ..++.++.+  +|.+||.|+.|+.|++|.+...+...
T Consensus       407 ~d~~~~~~fhpsg-~va~G-t~~G~w~V~d~e~~~lv~~~~d-~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y  483 (626)
T KOG2106|consen  407 EDPAECADFHPSG-VVAVG-TATGRWFVLDTETQDLVTIHTD-NEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKY  483 (626)
T ss_pred             cCceeEeeccCcc-eEEEe-eccceEEEEecccceeEEEEec-CCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEE
Confidence            5678999999999 88888 9999999999999666555544 888999988  89999999999999999998765443


Q ss_pred             ee-eecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCccccee-----------------------eeeecCCC
Q psy14511        319 TA-ITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLI-----------------------VPKLKREG  373 (488)
Q Consensus       319 ~~-~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~-----------------------~~~~~~~~  373 (488)
                      .. -..+.++|+.+.||+|+++|.+-+ |-.|..|...........+..                       ..+-+...
T Consensus       484 ~r~~k~~gs~ithLDwS~Ds~~~~~~S~d~eiLyW~~~~~~~~ts~kDvkW~t~~c~lGF~v~g~s~~t~i~a~~rs~~~  563 (626)
T KOG2106|consen  484 SRVGKCSGSPITHLDWSSDSQFLVSNSGDYEILYWKPSECKQITSVKDVKWATYTCTLGFEVFGGSDGTDINAVARSHCE  563 (626)
T ss_pred             EEeeeecCceeEEeeecCCCceEEeccCceEEEEEccccCcccceecceeeeeeEEEEEEEEecccCCchHHHhhhhhhh
Confidence            33 334458899999999999999998 799999954433333322211                       01444556


Q ss_pred             CEEEEEccCCCCeEEEEeCCCcc---eeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEec
Q psy14511        374 RELVTSHGKQDCSLKMWEYPRLH---LIEELKIHQERILSAVLSPDQTCVAAASADETISIWNC  434 (488)
Q Consensus       374 ~~l~~~~g~~~~~i~i~d~~~~~---~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~  434 (488)
                      +.+++  |.+.|.|++|..+--+   +..++.+|++.|++++|.-+...|.+.+.|..|..|++
T Consensus       564 ~~lA~--gdd~g~v~lf~yPc~s~rA~~he~~ghs~~vt~V~Fl~~d~~li~tg~D~Si~qW~l  625 (626)
T KOG2106|consen  564 KLLAS--GDDFGKVHLFSYPCSSPRAPSHEYGGHSSHVTNVAFLCKDSHLISTGKDTSIMQWRL  625 (626)
T ss_pred             hhhhc--cccCceEEEEccccCCCcccceeeccccceeEEEEEeeCCceEEecCCCceEEEEEe
Confidence            66777  8999999999986433   44677899999999999999999988889999999986

>KOG2048|consensus

Probab=99.97  E-value=2.2e-27  Score=208.97  Aligned_cols=371  Identities=18%  Similarity=0.241  Sum_probs=257.6

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccceeecccC-ceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCcccccccccc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITREG-DVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSA   82 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~-~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~~   82 (488)
                      +.+.||.+-.+|.|.||++.........+.++. ..|.+++|++.++++-++.+|.|.-||+.+++.   ........+.
T Consensus        36 kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e~~RLFS~g~sg~i~EwDl~~lk~---~~~~d~~gg~  112 (691)
T KOG2048|consen   36 KSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWAEGGRLFSSGLSGSITEWDLHTLKQ---KYNIDSNGGA  112 (691)
T ss_pred             cCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEccCCeEEeecCCceEEEEecccCce---eEEecCCCcc
Confidence            567799999999999999998876666666654 589999999777777666699999999998553   3344556789


Q ss_pred             eeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccc
Q psy14511         83 VKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQS  162 (488)
Q Consensus        83 v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (488)
                      |++++.+|.+..++..+.   ||.+...+...++.........+                                    
T Consensus       113 IWsiai~p~~~~l~Igcd---dGvl~~~s~~p~~I~~~r~l~rq------------------------------------  153 (691)
T KOG2048|consen  113 IWSIAINPENTILAIGCD---DGVLYDFSIGPDKITYKRSLMRQ------------------------------------  153 (691)
T ss_pred             eeEEEeCCccceEEeecC---CceEEEEecCCceEEEEeecccc------------------------------------
Confidence            999999999877666665   99888888777765443322211                                    


Q ss_pred             cccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCC--cEEEEECCCeEEEEECCCCceEEEEecC--C
Q psy14511        163 KRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYH--DTLAVALDTSVYTWNTKTNKTQLLVEYP--T  238 (488)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~v~iw~~~~~~~~~~~~~~--~  238 (488)
                                                         .-.+.++.|++.  +++.|+.||.|++||...+.........  +
T Consensus       154 -----------------------------------~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~  198 (691)
T KOG2048|consen  154 -----------------------------------KSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDR  198 (691)
T ss_pred             -----------------------------------cceEEEEEecCCccEEEecccCceEEEEEcCCCceEEEeeecccc
Confidence                                               112233555553  4688889999999999999877643321  1


Q ss_pred             ---CCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcC
Q psy14511        239 ---YDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRT  313 (488)
Q Consensus       239 ---~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~  313 (488)
                         ....-|.++.|-.++ .|+++ .+.|+|.+||...+..++....|...|.+++.  +++.+++++.|+.|..|....
T Consensus       199 l~k~~~~iVWSv~~Lrd~-tI~sg-DS~G~V~FWd~~~gTLiqS~~~h~adVl~Lav~~~~d~vfsaGvd~~ii~~~~~~  276 (691)
T KOG2048|consen  199 LSKREPTIVWSVLFLRDS-TIASG-DSAGTVTFWDSIFGTLIQSHSCHDADVLALAVADNEDRVFSAGVDPKIIQYSLTT  276 (691)
T ss_pred             cccCCceEEEEEEEeecC-cEEEe-cCCceEEEEcccCcchhhhhhhhhcceeEEEEcCCCCeEEEccCCCceEEEEecC
Confidence               123457788887655 78888 99999999999999999999999999999999  568999999999999998877


Q ss_pred             CCc---cceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCC----------------------------------
Q psy14511        314 HSD---YPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQ----------------------------------  355 (488)
Q Consensus       314 ~~~---~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~----------------------------------  355 (488)
                      .+.   .......|...+.+++..++  .+.+|+ |..+.+-..+.                                  
T Consensus       277 ~~~~wv~~~~r~~h~hdvrs~av~~~--~l~sgG~d~~l~i~~s~~~~~~~h~~~~~~p~~~~v~~a~~~~L~~~w~~h~  354 (691)
T KOG2048|consen  277 NKSEWVINSRRDLHAHDVRSMAVIEN--ALISGGRDFTLAICSSREFKNMDHRQKNLFPASDRVSVAPENRLLVLWKAHG  354 (691)
T ss_pred             CccceeeeccccCCcccceeeeeecc--eEEecceeeEEEEccccccCchhhhccccccccceeecCccceEEEEecccc
Confidence            643   12223445555777766654  444444 34443332221                                  


Q ss_pred             --------CCCC------ccccee--------eeeecCCCCEEEEEccCCCCeEEEEeC---------------------
Q psy14511        356 --------LDAK------RPLGLI--------VPKLKREGRELVTSHGKQDCSLKMWEY---------------------  392 (488)
Q Consensus       356 --------~~~~------~~~~~~--------~~~~~~~~~~l~~~~g~~~~~i~i~d~---------------------  392 (488)
                              ....      ..++..        ..+.||+|++++..+   -..+++|.+                     
T Consensus       355 v~lwrlGS~~~~g~~~~~~Llkl~~k~~~nIs~~aiSPdg~~Ia~st---~~~~~iy~L~~~~~vk~~~v~~~~~~~~~a  431 (691)
T KOG2048|consen  355 VDLWRLGSVILQGEYNYIHLLKLFTKEKENISCAAISPDGNLIAIST---VSRTKIYRLQPDPNVKVINVDDVPLALLDA  431 (691)
T ss_pred             ccceeccCcccccccChhhheeeecCCccceeeeccCCCCCEEEEee---ccceEEEEeccCcceeEEEeccchhhhccc
Confidence                    1000      000000        228889999888732   122222222                     


Q ss_pred             ---------------------------CC--cceeEEEe--eccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccc
Q psy14511        393 ---------------------------PR--LHLIEELK--IHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKR  441 (488)
Q Consensus       393 ---------------------------~~--~~~~~~~~--~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~  441 (488)
                                                 .+  .+.+..+.  +-...|..+..||||++||+.+.+|.|.+|++++.+...
T Consensus       432 ~~i~ftid~~k~~~~s~~~~~le~~el~~ps~kel~~~~~~~~~~~I~~l~~SsdG~yiaa~~t~g~I~v~nl~~~~~~~  511 (691)
T KOG2048|consen  432 SAISFTIDKNKLFLVSKNIFSLEEFELETPSFKELKSIQSQAKCPSISRLVVSSDGNYIAAISTRGQIFVYNLETLESHL  511 (691)
T ss_pred             eeeEEEecCceEEEEecccceeEEEEecCcchhhhhccccccCCCcceeEEEcCCCCEEEEEeccceEEEEEcccceeec
Confidence                                       11  11111111  123478999999999999999999999999999998875


Q ss_pred             cc-cccCCcceEEeecCC
Q psy14511        442 KA-RQVGSGSSLEFAILK  458 (488)
Q Consensus       442 ~~-~~~~~v~~~~~s~~~  458 (488)
                      +. .....++.++|+|..
T Consensus       512 l~~rln~~vTa~~~~~~~  529 (691)
T KOG2048|consen  512 LKVRLNIDVTAAAFSPFV  529 (691)
T ss_pred             chhccCcceeeeeccccc
Confidence            54 555888999999643

>KOG0973|consensus

Probab=99.97  E-value=2.1e-28  Score=227.19  Aligned_cols=298  Identities=17%  Similarity=0.284  Sum_probs=223.9

Q ss_pred             ecccCceEEEEEEccCCcEEEEec---CCeEEEEeccccC---------cCCCcccccccccceeEEEEecCCCeEEeee
Q psy14511         32 ITREGDVVCGLKWSPNGRYLASGS---NNTVKIWDFRQLD---------AKRPQVNNQCHLSAVKAIAWCPWEPTLLATG   99 (488)
Q Consensus        32 ~~~h~~~V~~l~~sp~g~~las~~---d~~i~vwd~~~~~---------~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~   99 (488)
                      +.++...|.++..+|||..+|+|+   |+.++||+.+.--         ..+.+.....|.+.|.|+.|+|||++|++.+
T Consensus         9 v~H~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGS   88 (942)
T KOG0973|consen    9 VNHNEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGS   88 (942)
T ss_pred             cccCCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeecc
Confidence            445566899999999999999998   8999999875311         2334455667999999999999999866665


Q ss_pred             CCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeeccccccc
Q psy14511        100 GGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLP  179 (488)
Q Consensus       100 ~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (488)
                      .   |+.|.+|..... ......+                                                        
T Consensus        89 D---D~~v~iW~~~~~-~~~~~fg--------------------------------------------------------  108 (942)
T KOG0973|consen   89 D---DRLVMIWERAEI-GSGTVFG--------------------------------------------------------  108 (942)
T ss_pred             C---cceEEEeeeccc-CCccccc--------------------------------------------------------
Confidence            5   999999996531 0000000                                                        


Q ss_pred             ccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEE
Q psy14511        180 RKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVT  259 (488)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~  259 (488)
                                                       ..+....+.-|       .....+.+ |...|..++|+|++.+++++
T Consensus       109 ---------------------------------s~g~~~~vE~w-------k~~~~l~~-H~~DV~Dv~Wsp~~~~lvS~  147 (942)
T KOG0973|consen  109 ---------------------------------STGGAKNVESW-------KVVSILRG-HDSDVLDVNWSPDDSLLVSV  147 (942)
T ss_pred             ---------------------------------cccccccccee-------eEEEEEec-CCCccceeccCCCccEEEEe
Confidence                                             00011111112       22333444 99999999999999999999


Q ss_pred             eCCCCcEEEEECCcceeeeeeccccccEEEEEec--CCEEEEeecCCeEEEEECcCCCccceeeecC------CccEEEE
Q psy14511        260 NTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWN--GNLLSCGTIGGNILHYDVRTHSDYPTAITRE------GDVVCGL  331 (488)
Q Consensus       260 ~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~------~~~i~~~  331 (488)
                       +.|++|.+|+..+.+.+..+.+|...|..+.||  |+++++-+.|++|++|+..+-+ ..+.+.++      ...+..+
T Consensus       148 -s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~-i~k~It~pf~~~~~~T~f~Rl  225 (942)
T KOG0973|consen  148 -SLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWG-IEKSITKPFEESPLTTFFLRL  225 (942)
T ss_pred             -cccceEEEEccccceeeeeeecccccccceEECCccCeeeeecCCceEEEEEcccce-eeEeeccchhhCCCcceeeec
Confidence             999999999999999999999999999999996  8999999999999999976532 33333332      2347789


Q ss_pred             EEccCCcEEEEEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEE
Q psy14511        332 KWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSA  411 (488)
Q Consensus       332 ~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~  411 (488)
                      .|||||++|++...       +                           ......+.|.+-.+.+.-..|-||..++..+
T Consensus       226 SWSPDG~~las~nA-------~---------------------------n~~~~~~~IieR~tWk~~~~LvGH~~p~evv  271 (942)
T KOG0973|consen  226 SWSPDGHHLASPNA-------V---------------------------NGGKSTIAIIERGTWKVDKDLVGHSAPVEVV  271 (942)
T ss_pred             ccCCCcCeecchhh-------c---------------------------cCCcceeEEEecCCceeeeeeecCCCceEEE
Confidence            99999999998742       0                           1123446666666677778899999999999


Q ss_pred             EEcCC-----CC------------EEEEEeCCCcEEEEecCCCCcccc--ccccCCcceEEeecCCCceEEEEe
Q psy14511        412 VLSPD-----QT------------CVAAASADETISIWNCFPRDKKRK--ARQVGSGSSLEFAILKQPVSLTAL  466 (488)
Q Consensus       412 ~~s~~-----~~------------~l~t~~~dg~v~iw~~~~~~~~~~--~~~~~~v~~~~~s~~~~~~~~~~~  466 (488)
                      +|+|.     .+            .+|+||.|++|.||.....+++..  .-....|..+.|+|||..+-...+
T Consensus       272 rFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~lf~~SI~DmsWspdG~~LfacS~  345 (942)
T KOG0973|consen  272 RFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVIHNLFNKSIVDMSWSPDGFSLFACSL  345 (942)
T ss_pred             EeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCchhhhhhhhcCceeeeeEcCCCCeEEEEec
Confidence            99981     11            678999999999999988887733  345678999999999998855443

>KOG0313|consensus

Probab=99.97  E-value=1.1e-28  Score=202.33  Aligned_cols=280  Identities=20%  Similarity=0.346  Sum_probs=216.1

Q ss_pred             ccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCC---eEEeeeCCcccceEEE
Q psy14511         34 REGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEP---TLLATGGGICDQTVRL  109 (488)
Q Consensus        34 ~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~---~l~~~~~~~~d~~i~v  109 (488)
                      .|.+.|.++...  +++|++|+ ||.+++||...    +.+....+|.++|.+++|.-...   .+++++.   |.++++
T Consensus       103 ~hdDWVSsv~~~--~~~IltgsYDg~~riWd~~G----k~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~---Dqtl~L  173 (423)
T KOG0313|consen  103 LHDDWVSSVKGA--SKWILTGSYDGTSRIWDLKG----KSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASM---DQTLRL  173 (423)
T ss_pred             cchhhhhhhccc--CceEEEeecCCeeEEEecCC----ceEEEEecCCcceeeeEEEecCCccceEEEecC---CceEEE
Confidence            578888888877  78999999 99999999874    34556789999999998854332   2455554   999999


Q ss_pred             EecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCcee
Q psy14511        110 WNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERI  189 (488)
Q Consensus       110 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (488)
                      |.++.+......                                                                    
T Consensus       174 w~~~~~~~~~~~--------------------------------------------------------------------  185 (423)
T KOG0313|consen  174 WKWNVGENKVKA--------------------------------------------------------------------  185 (423)
T ss_pred             EEecCchhhhhH--------------------------------------------------------------------
Confidence            998776532110                                                                    


Q ss_pred             ecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEE
Q psy14511        190 LEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLW  269 (488)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~  269 (488)
                                                                 .....| |...|.++...+++..++++ +.|..|.+|
T Consensus       186 -------------------------------------------~~~~~G-Hk~~V~sVsv~~sgtr~~Sg-S~D~~lkiW  220 (423)
T KOG0313|consen  186 -------------------------------------------LKVCRG-HKRSVDSVSVDSSGTRFCSG-SWDTMLKIW  220 (423)
T ss_pred             -------------------------------------------HhHhcc-cccceeEEEecCCCCeEEee-cccceeeec
Confidence                                                       001113 99999999999999999999 999999999


Q ss_pred             ECC-------------------------cceeeeeeccccccEEEEEe-cCCEEEEeecCCeEEEEECcCCCccceeeec
Q psy14511        270 HEQ-------------------------EERLIQKLRTHMHQVIAMCW-NGNLLSCGTIGGNILHYDVRTHSDYPTAITR  323 (488)
Q Consensus       270 d~~-------------------------~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~  323 (488)
                      +..                         ++.++..+.+|..+|.++.| +...+++++.|.+|+.||+.+++ ....+..
T Consensus       221 s~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d~~v~yS~SwDHTIk~WDletg~-~~~~~~~  299 (423)
T KOG0313|consen  221 SVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSDATVIYSVSWDHTIKVWDLETGG-LKSTLTT  299 (423)
T ss_pred             ccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcCCCceEeecccceEEEEEeeccc-ceeeeec
Confidence            932                         12345667899999999999 78899999999999999999975 3333333


Q ss_pred             CCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEe
Q psy14511        324 EGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELK  402 (488)
Q Consensus       324 ~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~  402 (488)
                       +..+.++..+|..++|++|+ |..+++||.+++                           ++.         -..+++.
T Consensus       300 -~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~---------------------------~gs---------~v~~s~~  342 (423)
T KOG0313|consen  300 -NKSLNCISYSPLSKLLASGSSDRHIRLWDPRTG---------------------------DGS---------VVSQSLI  342 (423)
T ss_pred             -CcceeEeecccccceeeecCCCCceeecCCCCC---------------------------CCc---------eeEEeee
Confidence             34589999999999999998 699999998865                           121         2346788


Q ss_pred             eccccEEEEEEcCCCC-EEEEEeCCCcEEEEecCCCC-cc-ccccccCCcceEEeecCCCceEEEEeeecccccceeeEE
Q psy14511        403 IHQERILSAVLSPDQT-CVAAASADETISIWNCFPRD-KK-RKARQVGSGSSLEFAILKQPVSLTALLRSRAVEKQQHAI  479 (488)
Q Consensus       403 ~~~~~v~~~~~s~~~~-~l~t~~~dg~v~iw~~~~~~-~~-~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~i  479 (488)
                      +|++-|.++.|+|... +|++++.|+++++||+.+.+ ++ ...+|..+|.++.|... ..+       ..+..|..+.|
T Consensus       343 gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~~~-~~I-------vSGGaD~~l~i  414 (423)
T KOG0313|consen  343 GHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWNEG-GLI-------VSGGADNKLRI  414 (423)
T ss_pred             cchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEEeccCC-ceE-------EeccCcceEEE
Confidence            9999999999999654 68899999999999999887 55 56788899999999862 222       33445555555


Q ss_pred             EE
Q psy14511        480 AY  481 (488)
Q Consensus       480 ~~  481 (488)
                      ..
T Consensus       415 ~~  416 (423)
T KOG0313|consen  415 FK  416 (423)
T ss_pred             ec
Confidence            43

>KOG0277|consensus

Probab=99.97  E-value=2.4e-29  Score=195.20  Aligned_cols=229  Identities=21%  Similarity=0.390  Sum_probs=191.2

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEcc-CCcEEEEec-CCeEEEEeccccCcCCCccccccccc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSP-NGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLS   81 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp-~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~   81 (488)
                      ..+.+++++.||+++|||..........++.|...|.++.|++ +++.+++++ |++|++|+..-   +..+.++.+|..
T Consensus        72 ~e~~~~~a~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r---~~Sv~Tf~gh~~  148 (311)
T KOG0277|consen   72 HENQVIAASGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNR---PNSVQTFNGHNS  148 (311)
T ss_pred             CcceEEEEecCceEEEeccCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCC---CcceEeecCCcc
Confidence            4567888889999999997766555677899999999999999 455666778 99999999765   556777999999


Q ss_pred             ceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecc
Q psy14511         82 AVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQ  161 (488)
Q Consensus        82 ~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (488)
                      .|....|+|....++++.++  |+++++||++....                                            
T Consensus       149 ~Iy~a~~sp~~~nlfas~Sg--d~~l~lwdvr~~gk--------------------------------------------  182 (311)
T KOG0277|consen  149 CIYQAAFSPHIPNLFASASG--DGTLRLWDVRSPGK--------------------------------------------  182 (311)
T ss_pred             EEEEEecCCCCCCeEEEccC--CceEEEEEecCCCc--------------------------------------------
Confidence            99999999988888888876  99999999864321                                            


Q ss_pred             ccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCC
Q psy14511        162 SKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDN  241 (488)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~  241 (488)
                                                                                          .+. ++  . |.
T Consensus       183 --------------------------------------------------------------------~~~-i~--a-h~  190 (311)
T KOG0277|consen  183 --------------------------------------------------------------------FMS-IE--A-HN  190 (311)
T ss_pred             --------------------------------------------------------------------eeE-EE--e-cc
Confidence                                                                                011 11  1 77


Q ss_pred             CceEEEEEcCCCCeEEEEeCCCCcEEEEECCcc-eeeeeeccccccEEEEEec---CCEEEEeecCCeEEEEECcCCCcc
Q psy14511        242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEE-RLIQKLRTHMHQVIAMCWN---GNLLSCGTIGGNILHYDVRTHSDY  317 (488)
Q Consensus       242 ~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~  317 (488)
                      ..|.|+.|+.....++++++.|+.|+.||++.- .++..+.+|.-.|..+.|.   ...|++++.|-++++||...+...
T Consensus       191 ~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds~  270 (311)
T KOG0277|consen  191 SEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQDSA  270 (311)
T ss_pred             ceeEeecccccCCcEEEecCCCceEEEEehhhccccceeecCCceEEEEEecCcchhhHhhhccccceEEecccccchhh
Confidence            889999999877766666699999999999874 5678889999999999994   579999999999999999977778


Q ss_pred             ceeeecCCccEEEEEEcc-CCcEEEEEe-cCeEEEEEC
Q psy14511        318 PTAITREGDVVCGLKWSP-NGRYLASGS-NNTVKIWDF  353 (488)
Q Consensus       318 ~~~~~~~~~~i~~~~~s~-~~~~l~~~~-d~~i~iwd~  353 (488)
                      +.....|..-+..+.||+ +..++|+++ |+.++||+.
T Consensus       271 ~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~p  308 (311)
T KOG0277|consen  271 IETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYVWNP  308 (311)
T ss_pred             hhhhhccceEEeccccccccCceeeecccccceeeecc
Confidence            888889999999999998 567889888 899999984

>KOG0973|consensus

Probab=99.97  E-value=1.8e-28  Score=227.58  Aligned_cols=284  Identities=18%  Similarity=0.272  Sum_probs=220.8

Q ss_pred             ccCCceEEEee--cCCeEEEEEcccC-----------cccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccc-
Q psy14511          2 CWNGNLLSCGT--IGGNILHYDVRTH-----------SDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQ-   66 (488)
Q Consensus         2 ~~dg~~la~g~--~dg~i~iwd~~~~-----------~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~-   66 (488)
                      ..||..+|+|+  .||.++||+.+.-           ......+..|.+.|+|+.|+|||++||+|+ |+.|.||+... 
T Consensus        22 ~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~  101 (942)
T KOG0973|consen   22 HPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEI  101 (942)
T ss_pred             cCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCcceEEEeeeccc
Confidence            45899999999  9999999986531           112234578999999999999999999999 89999999872 


Q ss_pred             --------------cCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCcccccc
Q psy14511         67 --------------LDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDET  132 (488)
Q Consensus        67 --------------~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~  132 (488)
                                    -+..+.+..+.+|.+.|..++|+|++.++++.+-   |++|.+||..+.+.+..+.+|...+..+.
T Consensus       102 ~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~---DnsViiwn~~tF~~~~vl~~H~s~VKGvs  178 (942)
T KOG0973|consen  102 GSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSL---DNSVIIWNAKTFELLKVLRGHQSLVKGVS  178 (942)
T ss_pred             CCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecc---cceEEEEccccceeeeeeecccccccceE
Confidence                          0122345567899999999999999987777765   99999999999998888888866554443


Q ss_pred             ccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEE
Q psy14511        133 ISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTL  212 (488)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (488)
                      +.|-                                                                       +..++
T Consensus       179 ~DP~-----------------------------------------------------------------------Gky~A  187 (942)
T KOG0973|consen  179 WDPI-----------------------------------------------------------------------GKYFA  187 (942)
T ss_pred             ECCc-----------------------------------------------------------------------cCeee
Confidence            3321                                                                       23455


Q ss_pred             EEECCCeEEEEECCCCceEEEEecCC---CCCCceEEEEEcCCCCeEEEEeCC---CCcEEEEECCcceeeeeecccccc
Q psy14511        213 AVALDTSVYTWNTKTNKTQLLVEYPT---YDNAYISCVAWKPRTTDLAVTNTC---TEYIDLWHEQEERLIQKLRTHMHQ  286 (488)
Q Consensus       213 ~~~~d~~v~iw~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~~---~~~i~i~d~~~~~~~~~~~~~~~~  286 (488)
                      +-+.|++|++|++.+-...+.+.-+-   .....+..+.|+|||.+|++..+.   ..++.|.+-.+.+.-..+-+|..+
T Consensus       188 SqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p  267 (942)
T KOG0973|consen  188 SQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAP  267 (942)
T ss_pred             eecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeEEEecCCceeeeeeecCCCc
Confidence            56699999999977755555444321   134567889999999999987433   346888888888888889999999


Q ss_pred             EEEEEec-------CC------------EEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cC
Q psy14511        287 VIAMCWN-------GN------------LLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NN  346 (488)
Q Consensus       287 v~~~~~~-------~~------------~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~  346 (488)
                      +.++.|+       .+            .+|+|+.|+.|.||.....+.......-.+..|..++|+|||..|..|+ ||
T Consensus       268 ~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~lf~~SI~DmsWspdG~~LfacS~DG  347 (942)
T KOG0973|consen  268 VEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVIHNLFNKSIVDMSWSPDGFSLFACSLDG  347 (942)
T ss_pred             eEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCchhhhhhhhcCceeeeeEcCCCCeEEEEecCC
Confidence            9999992       12            6889999999999999776544444455567899999999999998888 89


Q ss_pred             eEEEEECCCCCCC
Q psy14511        347 TVKIWDFRQLDAK  359 (488)
Q Consensus       347 ~i~iwd~~~~~~~  359 (488)
                      +|.++.++..+..
T Consensus       348 tV~~i~Fee~ElG  360 (942)
T KOG0973|consen  348 TVALIHFEEKELG  360 (942)
T ss_pred             eEEEEEcchHHhC
Confidence            9999999865443

>PTZ00421 coronin; Provisional

Probab=99.97  E-value=1.9e-27  Score=217.69  Aligned_cols=273  Identities=11%  Similarity=0.164  Sum_probs=191.1

Q ss_pred             cCceEEEEEEccCCcEEEEec-CCeEEEEecccc----------CcCCCcccccccccceeEEEEec-CCCeEEeeeCCc
Q psy14511         35 EGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQL----------DAKRPQVNNQCHLSAVKAIAWCP-WEPTLLATGGGI  102 (488)
Q Consensus        35 h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~----------~~~~~~~~~~~h~~~v~~l~~~~-~~~~l~~~~~~~  102 (488)
                      |-..|.....++|+..+++++ +.....|+...+          +.......+.+|.+.|.+++|+| +++.|++++.  
T Consensus        19 ~~~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~--   96 (493)
T PTZ00421         19 HFLNVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASE--   96 (493)
T ss_pred             ceeccccccccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeC--
Confidence            445566677777765555555 666666765432          21122223678999999999999 6766655555  


Q ss_pred             ccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccc
Q psy14511        103 CDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKV  182 (488)
Q Consensus       103 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (488)
                       |++|++||+.++......                                                             
T Consensus        97 -DgtIkIWdi~~~~~~~~~-------------------------------------------------------------  114 (493)
T PTZ00421         97 -DGTIMGWGIPEEGLTQNI-------------------------------------------------------------  114 (493)
T ss_pred             -CCEEEEEecCCCcccccc-------------------------------------------------------------
Confidence             999999998754311000                                                             


Q ss_pred             cCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCC-CeEEEEeC
Q psy14511        183 KAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRT-TDLAVTNT  261 (488)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~  261 (488)
                                                                   ..  ....+.+ |...|.+++|+|++ +.|+++ +
T Consensus       115 ---------------------------------------------~~--~l~~L~g-H~~~V~~l~f~P~~~~iLaSg-s  145 (493)
T PTZ00421        115 ---------------------------------------------SD--PIVHLQG-HTKKVGIVSFHPSAMNVLASA-G  145 (493)
T ss_pred             ---------------------------------------------Cc--ceEEecC-CCCcEEEEEeCcCCCCEEEEE-e
Confidence                                                         00  0112233 88899999999986 577777 8


Q ss_pred             CCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCcc-EEEEEEccCCc
Q psy14511        262 CTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDV-VCGLKWSPNGR  338 (488)
Q Consensus       262 ~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~-i~~~~~s~~~~  338 (488)
                      .|+.|++||+++++.+..+.+|...|.+++|  ++++|++++.|+.|++||++++. ....+..|... ...+.|.+++.
T Consensus       146 ~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~-~v~tl~~H~~~~~~~~~w~~~~~  224 (493)
T PTZ00421        146 ADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGT-IVSSVEAHASAKSQRCLWAKRKD  224 (493)
T ss_pred             CCCEEEEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCc-EEEEEecCCCCcceEEEEcCCCC
Confidence            9999999999999999999999999999999  78999999999999999999864 55667777654 45677888877


Q ss_pred             EEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcc-eeEEEeec-cccEEEEEEcC
Q psy14511        339 YLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLH-LIEELKIH-QERILSAVLSP  415 (488)
Q Consensus       339 ~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~-~~~~~~~~-~~~v~~~~~s~  415 (488)
                      .+++++ +                                   ++.|+.|++||+++.. ++.....+ ...+....|++
T Consensus       225 ~ivt~G~s-----------------------------------~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~  269 (493)
T PTZ00421        225 LIITLGCS-----------------------------------KSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDE  269 (493)
T ss_pred             eEEEEecC-----------------------------------CCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcC
Confidence            776653 1                                   1234444555544332 22222222 33566678999


Q ss_pred             CCCEEEEEe-CCCcEEEEecCCCCcccc--ccccCCcceEEeec
Q psy14511        416 DQTCVAAAS-ADETISIWNCFPRDKKRK--ARQVGSGSSLEFAI  456 (488)
Q Consensus       416 ~~~~l~t~~-~dg~v~iw~~~~~~~~~~--~~~~~~v~~~~~s~  456 (488)
                      ++++|++++ .|+.|++||+.+++....  .....+...++|.|
T Consensus       270 d~~~L~lggkgDg~Iriwdl~~~~~~~~~~~~s~~~~~g~~~~p  313 (493)
T PTZ00421        270 DTNLLYIGSKGEGNIRCFELMNERLTFCSSYSSVEPHKGLCMMP  313 (493)
T ss_pred             CCCEEEEEEeCCCeEEEEEeeCCceEEEeeccCCCCCcceEecc
Confidence            999999887 599999999999886643  23345567777777

>KOG0299|consensus

Probab=99.97  E-value=3.6e-28  Score=204.34  Aligned_cols=285  Identities=17%  Similarity=0.205  Sum_probs=218.7

Q ss_pred             eeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCC--------------cccc-cccccceeEEEEecCCC
Q psy14511         30 TAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRP--------------QVNN-QCHLSAVKAIAWCPWEP   93 (488)
Q Consensus        30 ~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~--------------~~~~-~~h~~~v~~l~~~~~~~   93 (488)
                      ..+..|.-+|.+++++||+++..+++ +++|.-|++.++...+.              .... .+|...+.+++.++|++
T Consensus       136 ~~~~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgk  215 (479)
T KOG0299|consen  136 RVIGKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGK  215 (479)
T ss_pred             eeeccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCc
Confidence            45678999999999999999999999 99999999988653311              1111 27889999999999999


Q ss_pred             eEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeec
Q psy14511         94 TLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLR  173 (488)
Q Consensus        94 ~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (488)
                      ||++.+.   |..|.||+.++.+.+..+.++...+...+|..                                      
T Consensus       216 ylatgg~---d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~--------------------------------------  254 (479)
T KOG0299|consen  216 YLATGGR---DRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRK--------------------------------------  254 (479)
T ss_pred             EEEecCC---CceEEEecCcccchhhcccccccceeeeeeec--------------------------------------
Confidence            9888776   99999999999998888887765544444322                                      


Q ss_pred             ccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCC
Q psy14511        174 TLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRT  253 (488)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  253 (488)
                                                       ..+++++++.|+.|++|+++....+.  .+.+ |...|..+....-+
T Consensus       255 ---------------------------------gt~~lys~s~Drsvkvw~~~~~s~ve--tlyG-Hqd~v~~IdaL~re  298 (479)
T KOG0299|consen  255 ---------------------------------GTSELYSASADRSVKVWSIDQLSYVE--TLYG-HQDGVLGIDALSRE  298 (479)
T ss_pred             ---------------------------------CccceeeeecCCceEEEehhHhHHHH--HHhC-Cccceeeechhccc
Confidence                                             24789999999999999998766543  3344 88999999988777


Q ss_pred             CeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe-cCCEEEEeecCCeEEEEECcCCCccceeeecC--------
Q psy14511        254 TDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW-NGNLLSCGTIGGNILHYDVRTHSDYPTAITRE--------  324 (488)
Q Consensus       254 ~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--------  324 (488)
                      +.+.++ +.|.++++|++.. .....+.++.+.+-|+++ +...+++|+.+|.|.+|++...+.....-..|        
T Consensus       299 R~vtVG-grDrT~rlwKi~e-esqlifrg~~~sidcv~~In~~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv~~~~~~  376 (479)
T KOG0299|consen  299 RCVTVG-GRDRTVRLWKIPE-ESQLIFRGGEGSIDCVAFINDEHFVSGSDNGSIALWSLLKKKPLFTSRLAHGVIPELDP  376 (479)
T ss_pred             ceEEec-cccceeEEEeccc-cceeeeeCCCCCeeeEEEecccceeeccCCceEEEeeecccCceeEeeccccccCCccc
Confidence            777666 8999999999954 445567788999999999 89999999999999999998754332222222        


Q ss_pred             ---CccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEE
Q psy14511        325 ---GDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEE  400 (488)
Q Consensus       325 ---~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~  400 (488)
                         +..|++++..|...++|+|+ +|.|++|-+..+-                                   +...++..
T Consensus       377 ~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~-----------------------------------r~i~~l~~  421 (479)
T KOG0299|consen  377 VNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGL-----------------------------------RAINLLYS  421 (479)
T ss_pred             cccccceeeeEecccCceEEecCCCCceEEEEecCCc-----------------------------------cccceeee
Confidence               23688889899888999888 5888888776541                                   11233444


Q ss_pred             EeeccccEEEEEEcCCCCEEEEE-eCCCcE
Q psy14511        401 LKIHQERILSAVLSPDQTCVAAA-SADETI  429 (488)
Q Consensus       401 ~~~~~~~v~~~~~s~~~~~l~t~-~~dg~v  429 (488)
                      +. -.+-|++++|+++|+.+++| +....+
T Consensus       422 ls-~~GfVNsl~f~~sgk~ivagiGkEhRl  450 (479)
T KOG0299|consen  422 LS-LVGFVNSLAFSNSGKRIVAGIGKEHRL  450 (479)
T ss_pred             cc-cccEEEEEEEccCCCEEEEeccccccc
Confidence            44 45679999999999966655 344333

>KOG0310|consensus

Probab=99.97  E-value=7.5e-28  Score=203.97  Aligned_cols=265  Identities=22%  Similarity=0.382  Sum_probs=212.5

Q ss_pred             EEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEE
Q psy14511          8 LSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAI   86 (488)
Q Consensus         8 la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l   86 (488)
                      +|+.+ .-.+.||+..+.... ..+..-...|.++.|-.||++||+|+ .|.|+|+|.++   ...+..+.+|+.+|..+
T Consensus        42 ~aVt~-S~rvqly~~~~~~~~-k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~---r~iLR~~~ah~apv~~~  116 (487)
T KOG0310|consen   42 FAVTS-SVRVQLYSSVTRSVR-KTFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKS---RVILRQLYAHQAPVHVT  116 (487)
T ss_pred             eEEec-ccEEEEEecchhhhh-hhHHhhccceeEEEeecCCeEEEccCCcCcEEEecccc---HHHHHHHhhccCceeEE
Confidence            45444 446999998887643 45666777899999999999999998 89999999665   33455678899999999


Q ss_pred             EEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccc
Q psy14511         87 AWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTV  166 (488)
Q Consensus        87 ~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (488)
                      .|+|++..++++|++  |+.+++||+.+...                                                 
T Consensus       117 ~f~~~d~t~l~s~sD--d~v~k~~d~s~a~v-------------------------------------------------  145 (487)
T KOG0310|consen  117 KFSPQDNTMLVSGSD--DKVVKYWDLSTAYV-------------------------------------------------  145 (487)
T ss_pred             EecccCCeEEEecCC--CceEEEEEcCCcEE-------------------------------------------------
Confidence            999999999999985  88999999876542                                                 


Q ss_pred             cceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEE
Q psy14511        167 SPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISC  246 (488)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~  246 (488)
                                                                                        ...+.+ |+..|.|
T Consensus       146 ------------------------------------------------------------------~~~l~~-htDYVR~  158 (487)
T KOG0310|consen  146 ------------------------------------------------------------------QAELSG-HTDYVRC  158 (487)
T ss_pred             ------------------------------------------------------------------EEEecC-CcceeEe
Confidence                                                                              112233 8899999


Q ss_pred             EEEcCCCCeEEEEeCCCCcEEEEECCcc-eeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeec
Q psy14511        247 VAWKPRTTDLAVTNTCTEYIDLWHEQEE-RLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITR  323 (488)
Q Consensus       247 ~~~~~~~~~l~~~~~~~~~i~i~d~~~~-~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~  323 (488)
                      .+|+|....++++|+.||.|++||++.. ..+..+ .|..+|-.+.+  .|..+++++ ...+++||+.++.+.+.....
T Consensus       159 g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~el-nhg~pVe~vl~lpsgs~iasAg-Gn~vkVWDl~~G~qll~~~~~  236 (487)
T KOG0310|consen  159 GDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVEL-NHGCPVESVLALPSGSLIASAG-GNSVKVWDLTTGGQLLTSMFN  236 (487)
T ss_pred             eccccCCCeEEEecCCCceEEEEEeccCCceeEEe-cCCCceeeEEEcCCCCEEEEcC-CCeEEEEEecCCceehhhhhc
Confidence            9999998877777699999999999986 455555 58899999988  668888876 457999999988877777777


Q ss_pred             CCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEe
Q psy14511        324 EGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELK  402 (488)
Q Consensus       324 ~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~  402 (488)
                      |...|+|+++..+++.|++++ |+.+++||+.                                       +.+.+..+.
T Consensus       237 H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t---------------------------------------~~Kvv~s~~  277 (487)
T KOG0310|consen  237 HNKTVTCLRLASDSTRLLSGSLDRHVKVFDTT---------------------------------------NYKVVHSWK  277 (487)
T ss_pred             ccceEEEEEeecCCceEeecccccceEEEEcc---------------------------------------ceEEEEeee
Confidence            999999999999999998887 6666666643                                       334444444


Q ss_pred             eccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCC
Q psy14511        403 IHQERILSAVLSPDQTCVAAASADETISIWNCFPR  437 (488)
Q Consensus       403 ~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~  437 (488)
                       ..++|.+++.+||++.++.|-.||.+.+=+....
T Consensus       278 -~~~pvLsiavs~dd~t~viGmsnGlv~~rr~~~k  311 (487)
T KOG0310|consen  278 -YPGPVLSIAVSPDDQTVVIGMSNGLVSIRRREVK  311 (487)
T ss_pred             -cccceeeEEecCCCceEEEecccceeeeehhhcc
Confidence             5678999999999999999999998887644433

>KOG0640|consensus

Probab=99.97  E-value=7.9e-29  Score=197.92  Aligned_cols=278  Identities=18%  Similarity=0.243  Sum_probs=213.9

Q ss_pred             CccCCceEEEeecCCeEEEEEccc-----------------CcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEE
Q psy14511          1 MCWNGNLLSCGTIGGNILHYDVRT-----------------HSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIW   62 (488)
Q Consensus         1 ~~~dg~~la~g~~dg~i~iwd~~~-----------------~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vw   62 (488)
                      ++.||.++|+|+.|-.|+|.|++.                 +.++.+++-.|.+.|+++.|+|....|++|+ |++|+++
T Consensus       120 fs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~ILiS~srD~tvKlF  199 (430)
T KOG0640|consen  120 FSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRETILISGSRDNTVKLF  199 (430)
T ss_pred             eCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhheEEeccCCCeEEEE
Confidence            456999999999999999999872                 1123356678999999999999999999999 9999999


Q ss_pred             eccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccce
Q psy14511         63 DFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRR  142 (488)
Q Consensus        63 d~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (488)
                      |+.....++....++ ...+|.++.|+|.|.+|++...   -.++++||+++-++........+                
T Consensus       200 DfsK~saKrA~K~~q-d~~~vrsiSfHPsGefllvgTd---Hp~~rlYdv~T~QcfvsanPd~q----------------  259 (430)
T KOG0640|consen  200 DFSKTSAKRAFKVFQ-DTEPVRSISFHPSGEFLLVGTD---HPTLRLYDVNTYQCFVSANPDDQ----------------  259 (430)
T ss_pred             ecccHHHHHHHHHhh-ccceeeeEeecCCCceEEEecC---CCceeEEeccceeEeeecCcccc----------------
Confidence            998644444333333 5679999999999998888776   88999999998876443321111                


Q ss_pred             eEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC--CCcEEEEECCCeE
Q psy14511        143 HLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG--YHDTLAVALDTSV  220 (488)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~v  220 (488)
                                                                            ..-.+..+.++  ....++++.||.|
T Consensus       260 ------------------------------------------------------ht~ai~~V~Ys~t~~lYvTaSkDG~I  285 (430)
T KOG0640|consen  260 ------------------------------------------------------HTGAITQVRYSSTGSLYVTASKDGAI  285 (430)
T ss_pred             ------------------------------------------------------cccceeEEEecCCccEEEEeccCCcE
Confidence                                                                  01112223332  2456778899999


Q ss_pred             EEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecccc-----ccEEEEEe--c
Q psy14511        221 YTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHM-----HQVIAMCW--N  293 (488)
Q Consensus       221 ~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~-----~~v~~~~~--~  293 (488)
                      ++||--+++++..+.-.. ....|.+..|..++++++++ +.|..+++|.+.+++++..+.+-.     .--+...|  .
T Consensus       286 klwDGVS~rCv~t~~~AH-~gsevcSa~Ftkn~kyiLsS-G~DS~vkLWEi~t~R~l~~YtGAg~tgrq~~rtqAvFNht  363 (430)
T KOG0640|consen  286 KLWDGVSNRCVRTIGNAH-GGSEVCSAVFTKNGKYILSS-GKDSTVKLWEISTGRMLKEYTGAGTTGRQKHRTQAVFNHT  363 (430)
T ss_pred             EeeccccHHHHHHHHhhc-CCceeeeEEEccCCeEEeec-CCcceeeeeeecCCceEEEEecCCcccchhhhhhhhhcCc
Confidence            999999998877765543 56789999999999999999 999999999999999999886531     11123344  2


Q ss_pred             CCEEEEee-cCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEec-CeEEEEECC
Q psy14511        294 GNLLSCGT-IGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN-NTVKIWDFR  354 (488)
Q Consensus       294 ~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d-~~i~iwd~~  354 (488)
                      ..+++.-. ..+.+.-||.++.......-.+|++.+..+.-||.+.-+++|+| ..+++|--+
T Consensus       364 EdyVl~pDEas~slcsWdaRtadr~~l~slgHn~a~R~i~HSP~~p~FmTcsdD~raRFWyrr  426 (430)
T KOG0640|consen  364 EDYVLFPDEASNSLCSWDARTADRVALLSLGHNGAVRWIVHSPVEPAFMTCSDDFRARFWYRR  426 (430)
T ss_pred             cceEEccccccCceeeccccchhhhhhcccCCCCCceEEEeCCCCCceeeecccceeeeeeec
Confidence            45555543 35789999999987666677899999999999999999999995 999999654

>KOG1446|consensus

Probab=99.96  E-value=1.4e-26  Score=186.02  Aligned_cols=251  Identities=14%  Similarity=0.219  Sum_probs=203.0

Q ss_pred             ceeeeeeeCC--CcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCC--CCcEEEEECCcc
Q psy14511        199 FYTSGLDWGY--HDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTC--TEYIDLWHEQEE  274 (488)
Q Consensus       199 ~~~~~~~~~~--~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~--~~~i~i~d~~~~  274 (488)
                      ..+.+++++.  ..+++++.|..+++||..+++....+..   +...+..++|......++.+ +.  |.+|+..++.+.
T Consensus        15 ~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~s---kkyG~~~~~Fth~~~~~i~s-Stk~d~tIryLsl~dN   90 (311)
T KOG1446|consen   15 GKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINS---KKYGVDLACFTHHSNTVIHS-STKEDDTIRYLSLHDN   90 (311)
T ss_pred             CceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeec---ccccccEEEEecCCceEEEc-cCCCCCceEEEEeecC
Confidence            3455677754  4566667889999999999998888776   55567788887777677666 55  889999999999


Q ss_pred             eeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEec-CeEEEE
Q psy14511        275 RLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN-NTVKIW  351 (488)
Q Consensus       275 ~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d-~~i~iw  351 (488)
                      +.++.+.+|...|.+++.  -+..+++++.|++|++||++..+ +.-.+.....+  .++|+|+|-++|++.. +.|++|
T Consensus        91 kylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~-cqg~l~~~~~p--i~AfDp~GLifA~~~~~~~IkLy  167 (311)
T KOG1446|consen   91 KYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKK-CQGLLNLSGRP--IAAFDPEGLIFALANGSELIKLY  167 (311)
T ss_pred             ceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCC-CceEEecCCCc--ceeECCCCcEEEEecCCCeEEEE
Confidence            999999999999999988  46899999999999999999753 44444444333  4789999999999996 699999


Q ss_pred             ECCCCCCCccccee-----------eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccE---EEEEEcCCC
Q psy14511        352 DFRQLDAKRPLGLI-----------VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERI---LSAVLSPDQ  417 (488)
Q Consensus       352 d~~~~~~~~~~~~~-----------~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v---~~~~~s~~~  417 (488)
                      |++.... .++..+           .-.|||||++++.  +...+.+++.|.-+|....++..+...-   ...+|+||+
T Consensus       168 D~Rs~dk-gPF~tf~i~~~~~~ew~~l~FS~dGK~iLl--sT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds  244 (311)
T KOG1446|consen  168 DLRSFDK-GPFTTFSITDNDEAEWTDLEFSPDGKSILL--STNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDS  244 (311)
T ss_pred             EecccCC-CCceeEccCCCCccceeeeEEcCCCCEEEE--EeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCC
Confidence            9997643 222221           1199999999999  5778999999999999999998886532   578999999


Q ss_pred             CEEEEEeCCCcEEEEecCCCCccc-ccc-ccCCcceEEeecCCC
Q psy14511        418 TCVAAASADETISIWNCFPRDKKR-KAR-QVGSGSSLEFAILKQ  459 (488)
Q Consensus       418 ~~l~t~~~dg~v~iw~~~~~~~~~-~~~-~~~~v~~~~~s~~~~  459 (488)
                      +++++|+.||+|.+|+++++.... ..+ +.+++.++.|.|.-.
T Consensus       245 ~Fvl~gs~dg~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~~~  288 (311)
T KOG1446|consen  245 KFVLSGSDDGTIHVWNLETGKKVAVLRGPNGGPVSCVRFNPRYA  288 (311)
T ss_pred             cEEEEecCCCcEEEEEcCCCcEeeEecCCCCCCccccccCCcee
Confidence            999999999999999999998873 334 688899999999433

>KOG0647|consensus

Probab=99.96  E-value=1.1e-27  Score=190.78  Aligned_cols=258  Identities=17%  Similarity=0.269  Sum_probs=200.0

Q ss_pred             CCceEEEeecCCeEEEEEccc-CcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCccccccccc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRT-HSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLS   81 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~-~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~   81 (488)
                      ...++++|+.||+|++|+++. +...++....|.++|.+++|+.||..+++|+ |+.+++||+.+++.    .....|.+
T Consensus        39 ~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~Q~----~~v~~Hd~  114 (347)
T KOG0647|consen   39 ADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASGQV----SQVAAHDA  114 (347)
T ss_pred             cCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCCCe----eeeeeccc
Confidence            567888999999999999987 4555667788999999999999999999998 99999999998643    23567999


Q ss_pred             ceeEEEEecCCC-eEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceec
Q psy14511         82 AVKAIAWCPWEP-TLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLN  160 (488)
Q Consensus        82 ~v~~l~~~~~~~-~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (488)
                      +|.++.|-+... .++++|+  +|++|++||.+...++.++.....                                  
T Consensus       115 pvkt~~wv~~~~~~cl~TGS--WDKTlKfWD~R~~~pv~t~~LPeR----------------------------------  158 (347)
T KOG0647|consen  115 PVKTCHWVPGMNYQCLVTGS--WDKTLKFWDTRSSNPVATLQLPER----------------------------------  158 (347)
T ss_pred             ceeEEEEecCCCcceeEecc--cccceeecccCCCCeeeeeeccce----------------------------------
Confidence            999999987543 3677777  799999999998877766654311                                  


Q ss_pred             cccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCC
Q psy14511        161 QSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYD  240 (488)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~  240 (488)
                                                              +.+++.-...++++..++.|.+|+++.+.......... .
T Consensus       159 ----------------------------------------vYa~Dv~~pm~vVata~r~i~vynL~n~~te~k~~~Sp-L  197 (347)
T KOG0647|consen  159 ----------------------------------------VYAADVLYPMAVVATAERHIAVYNLENPPTEFKRIESP-L  197 (347)
T ss_pred             ----------------------------------------eeehhccCceeEEEecCCcEEEEEcCCCcchhhhhcCc-c
Confidence                                                    01111122456777799999999998765433222111 4


Q ss_pred             CCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcc--eeeeeeccccc---------cEEEEEec--CCEEEEeecCCeEE
Q psy14511        241 NAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEE--RLIQKLRTHMH---------QVIAMCWN--GNLLSCGTIGGNIL  307 (488)
Q Consensus       241 ~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~--~~~~~~~~~~~---------~v~~~~~~--~~~l~~~~~dg~i~  307 (488)
                      .-.++|++..++....+.| +-+|.+.+..+..+  +.-..++.|..         .|.+++|.  -..|++++.||.+.
T Consensus       198 k~Q~R~va~f~d~~~~alG-siEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~  276 (347)
T KOG0647|consen  198 KWQTRCVACFQDKDGFALG-SIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHGTLVTAGSDGTFS  276 (347)
T ss_pred             cceeeEEEEEecCCceEee-eecceEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEeecccceEEEecCCceEE
Confidence            5578999999998888888 99999999988876  33444555542         46678884  57899999999999


Q ss_pred             EEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe
Q psy14511        308 HYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS  344 (488)
Q Consensus       308 i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~  344 (488)
                      +||-... ..+.....|..+|++.+|+.+|.++|.+.
T Consensus       277 FWDkdar-~kLk~s~~~~qpItcc~fn~~G~ifaYA~  312 (347)
T KOG0647|consen  277 FWDKDAR-TKLKTSETHPQPITCCSFNRNGSIFAYAL  312 (347)
T ss_pred             Eecchhh-hhhhccCcCCCccceeEecCCCCEEEEEe
Confidence            9998764 45666778999999999999999998764

>KOG0283|consensus

Probab=99.96  E-value=2.7e-28  Score=220.59  Aligned_cols=197  Identities=17%  Similarity=0.343  Sum_probs=158.3

Q ss_pred             EecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe---cCCEEEEeecCCeEEEEE
Q psy14511        234 VEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW---NGNLLSCGTIGGNILHYD  310 (488)
Q Consensus       234 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~i~d  310 (488)
                      ..+.| |...|..+.|+.++ +|+++ +.|.+|+||++...+++..+ .|..-|+|++|   |.+++++|+-||.++||+
T Consensus       363 ~ef~G-Ht~DILDlSWSKn~-fLLSS-SMDKTVRLWh~~~~~CL~~F-~HndfVTcVaFnPvDDryFiSGSLD~KvRiWs  438 (712)
T KOG0283|consen  363 CEFKG-HTADILDLSWSKNN-FLLSS-SMDKTVRLWHPGRKECLKVF-SHNDFVTCVAFNPVDDRYFISGSLDGKVRLWS  438 (712)
T ss_pred             hhhhc-cchhheecccccCC-eeEec-cccccEEeecCCCcceeeEE-ecCCeeEEEEecccCCCcEeecccccceEEee
Confidence            34455 99999999999875 78888 99999999999999999988 49999999999   789999999999999999


Q ss_pred             CcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCccccee-----------ee--eecC-CCCE
Q psy14511        311 VRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLI-----------VP--KLKR-EGRE  375 (488)
Q Consensus       311 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~-----------~~--~~~~-~~~~  375 (488)
                      +...  .+.....-..-|++++|.|||++.+.|+ +|.+++|+....+........           +.  .|.| +...
T Consensus       439 I~d~--~Vv~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~  516 (712)
T KOG0283|consen  439 ISDK--KVVDWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDPDE  516 (712)
T ss_pred             cCcC--eeEeehhhhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEecCCCCCe
Confidence            9874  3444444457799999999999999999 799999999866443222111           11  3333 3333


Q ss_pred             EEEEccCCCCeEEEEeCCCcceeEEEeeccc--cEEEEEEcCCCCEEEEEeCCCcEEEEecCCCC
Q psy14511        376 LVTSHGKQDCSLKMWEYPRLHLIEELKIHQE--RILSAVLSPDQTCVAAASADETISIWNCFPRD  438 (488)
Q Consensus       376 l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~--~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~  438 (488)
                      +++  .+.|..|+|||..+.+++..++|+.+  .=....|+.||++|+++++|..|++|++....
T Consensus       517 vLV--TSnDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs~VYiW~~~~~~  579 (712)
T KOG0283|consen  517 VLV--TSNDSRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSASEDSWVYIWKNDSFN  579 (712)
T ss_pred             EEE--ecCCCceEEEeccchhhhhhhcccccCCcceeeeEccCCCEEEEeecCceEEEEeCCCCc
Confidence            444  27899999999988888888887744  33567899999999999999999999986544

>KOG1036|consensus

Probab=99.96  E-value=9.9e-27  Score=186.00  Aligned_cols=272  Identities=19%  Similarity=0.274  Sum_probs=209.3

Q ss_pred             ccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEec
Q psy14511         34 REGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNS  112 (488)
Q Consensus        34 ~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~  112 (488)
                      ...+.|+.+.|+|.+..|+.++ ||.+++||+......    ..-.|..++.+++|.++. .+++.+.   ||.|+.+|+
T Consensus        11 pP~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~----~~~~~~~plL~c~F~d~~-~~~~G~~---dg~vr~~Dl   82 (323)
T KOG1036|consen   11 PPEDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLK----LKFKHGAPLLDCAFADES-TIVTGGL---DGQVRRYDL   82 (323)
T ss_pred             CChhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhh----hheecCCceeeeeccCCc-eEEEecc---CceEEEEEe
Confidence            4467899999999988888888 999999999874221    123488999999999865 5666665   999999999


Q ss_pred             CCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecC
Q psy14511        113 MNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEA  192 (488)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (488)
                      .++...                                                                          
T Consensus        83 n~~~~~--------------------------------------------------------------------------   88 (323)
T KOG1036|consen   83 NTGNED--------------------------------------------------------------------------   88 (323)
T ss_pred             cCCcce--------------------------------------------------------------------------
Confidence            876521                                                                          


Q ss_pred             CCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECC
Q psy14511        193 PSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQ  272 (488)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~  272 (488)
                                                                .+.. |..++.|+.+++....++++ +.|++|++||.+
T Consensus        89 ------------------------------------------~igt-h~~~i~ci~~~~~~~~vIsg-sWD~~ik~wD~R  124 (323)
T KOG1036|consen   89 ------------------------------------------QIGT-HDEGIRCIEYSYEVGCVISG-SWDKTIKFWDPR  124 (323)
T ss_pred             ------------------------------------------eecc-CCCceEEEEeeccCCeEEEc-ccCccEEEEecc
Confidence                                                      1111 88899999999988899999 999999999999


Q ss_pred             cceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCcccee-eecCCccEEEEEEccCCcEEEEEe-cCeEEE
Q psy14511        273 EERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTA-ITREGDVVCGLKWSPNGRYLASGS-NNTVKI  350 (488)
Q Consensus       273 ~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~i  350 (488)
                      .......+.. ...|.+++..++.|+.|+.+..+.+||+++.....+. -....-.+.++++-|++.-.++++ ||.+.+
T Consensus       125 ~~~~~~~~d~-~kkVy~~~v~g~~LvVg~~~r~v~iyDLRn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVav  203 (323)
T KOG1036|consen  125 NKVVVGTFDQ-GKKVYCMDVSGNRLVVGTSDRKVLIYDLRNLDEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAV  203 (323)
T ss_pred             cccccccccc-CceEEEEeccCCEEEEeecCceEEEEEcccccchhhhccccceeEEEEEEEecCCCceEEEeecceEEE
Confidence            8555555543 4489999999999999999999999999986544322 223345689999999888777777 888877


Q ss_pred             EECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeec---------cccEEEEEEcCCCCEEE
Q psy14511        351 WDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIH---------QERILSAVLSPDQTCVA  421 (488)
Q Consensus       351 wd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~---------~~~v~~~~~s~~~~~l~  421 (488)
                      =.++..+..+.                                   ....++.|         --+|++++|+|-...||
T Consensus       204 E~~d~s~~~~s-----------------------------------kkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~tfa  248 (323)
T KOG1036|consen  204 EYFDDSEEAQS-----------------------------------KKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGTFA  248 (323)
T ss_pred             EccCCchHHhh-----------------------------------hceeEEeeecccCCceEEEEeceeEeccccceEE
Confidence            66554311110                                   00111112         12699999999999999


Q ss_pred             EEeCCCcEEEEecCCCCcccccc-ccCCcceEEeecCCCceEEEEee
Q psy14511        422 AASADETISIWNCFPRDKKRKAR-QVGSGSSLEFAILKQPVSLTALL  467 (488)
Q Consensus       422 t~~~dg~v~iw~~~~~~~~~~~~-~~~~v~~~~~s~~~~~~~~~~~~  467 (488)
                      ||+.||.|.+||+.+++.+.... ....|.+++|+.+|..++.....
T Consensus       249 TgGsDG~V~~Wd~~~rKrl~q~~~~~~SI~slsfs~dG~~LAia~sy  295 (323)
T KOG1036|consen  249 TGGSDGIVNIWDLFNRKRLKQLAKYETSISSLSFSMDGSLLAIASSY  295 (323)
T ss_pred             ecCCCceEEEccCcchhhhhhccCCCCceEEEEeccCCCeEEEEech
Confidence            99999999999999999885544 45779999999999999876543

>KOG0300|consensus

Probab=99.96  E-value=5.4e-28  Score=193.90  Aligned_cols=317  Identities=15%  Similarity=0.265  Sum_probs=233.7

Q ss_pred             cceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccce
Q psy14511         28 YPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQT  106 (488)
Q Consensus        28 ~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~  106 (488)
                      +.+.+.||.+.|+.++-......+.+++ |.+.+||.++++   +++..+.||.+.|+++.|++.+..+++.++   |++
T Consensus       140 lvre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg---~CL~~Y~GH~GSVNsikfh~s~~L~lTaSG---D~t  213 (481)
T KOG0300|consen  140 LVRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESG---ACLATYTGHTGSVNSIKFHNSGLLLLTASG---DET  213 (481)
T ss_pred             ehhhhcccccceeeehhhcCCcceeecccccceeEEeeccc---cceeeecccccceeeEEeccccceEEEccC---Ccc
Confidence            4456789999999999988888899998 999999999985   466678999999999999998865555554   999


Q ss_pred             EEEEecCCCeeeeeeec---CCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeeccccccccccc
Q psy14511        107 VRLWNSMNGKEKCHVKT---DSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVK  183 (488)
Q Consensus       107 i~vwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (488)
                      ..||...-.-....-..   ++... ....+ +                 +.                            
T Consensus       214 aHIW~~av~~~vP~~~a~~~hSsEe-E~e~s-D-----------------e~----------------------------  246 (481)
T KOG0300|consen  214 AHIWKAAVNWEVPSNNAPSDHSSEE-EEEHS-D-----------------EH----------------------------  246 (481)
T ss_pred             hHHHHHhhcCcCCCCCCCCCCCchh-hhhcc-c-----------------cc----------------------------
Confidence            99997322111100000   00000 00000 0                 00                            


Q ss_pred             CCCceeecCCCccccceeeeeeeCCCcEEEE--ECC-CeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEe
Q psy14511        184 AKPERILEAPSIINDFYTSGLDWGYHDTLAV--ALD-TSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTN  260 (488)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d-~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~  260 (488)
                                               +...-+  ..| .+|+         ..+..+.+ |...+.+..|...|+.++++ 
T Consensus       247 -------------------------~~d~d~~~~sD~~tiR---------vPl~~ltg-H~~vV~a~dWL~gg~Q~vTa-  290 (481)
T KOG0300|consen  247 -------------------------NRDTDSSEKSDGHTIR---------VPLMRLTG-HRAVVSACDWLAGGQQMVTA-  290 (481)
T ss_pred             -------------------------ccccccccccCCceee---------eeeeeeec-cccceEehhhhcCcceeeee-
Confidence                                     000000  001 1121         23445555 89999999999999999999 


Q ss_pred             CCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCc
Q psy14511        261 TCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGR  338 (488)
Q Consensus       261 ~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~  338 (488)
                      +.|.+-.+||+++++.+..+.+|....+.++-  ..+++++.+.|.+.++||++..-..+..+.+|.+.|+++.|..+. 
T Consensus       291 SWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~dd-  369 (481)
T KOG0300|consen  291 SWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTDD-  369 (481)
T ss_pred             eccccceeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEeccchhhcceeeeecccccceeEEEEecCC-
Confidence            99999999999999999999999999988877  578999999999999999997667788899999999999999765 


Q ss_pred             EEEEEe-cCeEEEEECCCCCCCccccee-----ee--eecCCCCEEEEEccCCCCeEEEEeCCCccee----EEEeeccc
Q psy14511        339 YLASGS-NNTVKIWDFRQLDAKRPLGLI-----VP--KLKREGRELVTSHGKQDCSLKMWEYPRLHLI----EELKIHQE  406 (488)
Q Consensus       339 ~l~~~~-d~~i~iwd~~~~~~~~~~~~~-----~~--~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~----~~~~~~~~  406 (488)
                      .+++++ |.+|++||+++...  ++..+     ++  +.+..+..++.  --++.+|++||+...++.    ..-++|..
T Consensus       370 ~vVSgSDDrTvKvWdLrNMRs--plATIRtdS~~NRvavs~g~~iIAi--PhDNRqvRlfDlnG~RlaRlPrtsRqgHrR  445 (481)
T KOG0300|consen  370 RVVSGSDDRTVKVWDLRNMRS--PLATIRTDSPANRVAVSKGHPIIAI--PHDNRQVRLFDLNGNRLARLPRTSRQGHRR  445 (481)
T ss_pred             ceeecCCCceEEEeeeccccC--cceeeecCCccceeEeecCCceEEe--ccCCceEEEEecCCCccccCCcccccccce
Confidence            566777 59999999998743  22222     11  56666667777  567889999999754332    23458999


Q ss_pred             cEEEEEEcCCCC--EEEEEeCCCcEEEEecCCCC
Q psy14511        407 RILSAVLSPDQT--CVAAASADETISIWNCFPRD  438 (488)
Q Consensus       407 ~v~~~~~s~~~~--~l~t~~~dg~v~iw~~~~~~  438 (488)
                      .|.+++|..+..  -|++++.|..+.-|++..+.
T Consensus       446 MV~c~AW~eehp~cnLftcGFDR~v~gW~in~p~  479 (481)
T KOG0300|consen  446 MVTCCAWLEEHPACNLFTCGFDRMVAGWKINTPT  479 (481)
T ss_pred             eeeeeeccccCcccccccccccceeeeeEecccC
Confidence            999999987643  57899999999999998754

>KOG4283|consensus

Probab=99.96  E-value=4.4e-27  Score=186.66  Aligned_cols=284  Identities=21%  Similarity=0.372  Sum_probs=216.4

Q ss_pred             eecccCceEEEEEEcc-CCcEEEEec-CCeEEEEeccccCcCC---------C---cccccccccceeEEEEecCCCeEE
Q psy14511         31 AITREGDVVCGLKWSP-NGRYLASGS-NNTVKIWDFRQLDAKR---------P---QVNNQCHLSAVKAIAWCPWEPTLL   96 (488)
Q Consensus        31 ~~~~h~~~V~~l~~sp-~g~~las~~-d~~i~vwd~~~~~~~~---------~---~~~~~~h~~~v~~l~~~~~~~~l~   96 (488)
                      +...|.+.|+++...+ .|+|+++|+ ||.|.|||++.....+         +   ..-..+|.-.|.++.|-|-..-++
T Consensus        38 ~~r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmF  117 (397)
T KOG4283|consen   38 FVRPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMF  117 (397)
T ss_pred             eeccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCcee
Confidence            4567999999999998 799999998 9999999997533111         0   111245777899999988777778


Q ss_pred             eeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccc
Q psy14511         97 ATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLG  176 (488)
Q Consensus        97 ~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (488)
                      ++++  .|.+++|||..+.+....                                                        
T Consensus       118 tssS--FDhtlKVWDtnTlQ~a~~--------------------------------------------------------  139 (397)
T KOG4283|consen  118 TSSS--FDHTLKVWDTNTLQEAVD--------------------------------------------------------  139 (397)
T ss_pred             eccc--ccceEEEeecccceeeEE--------------------------------------------------------
Confidence            8777  599999999876653222                                                        


Q ss_pred             cccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCC---
Q psy14511        177 KLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRT---  253 (488)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---  253 (488)
                                                                               +.    .++.|.+-+++|-.   
T Consensus       140 ---------------------------------------------------------F~----me~~VYshamSp~a~sH  158 (397)
T KOG4283|consen  140 ---------------------------------------------------------FK----MEGKVYSHAMSPMAMSH  158 (397)
T ss_pred             ---------------------------------------------------------ee----cCceeehhhcChhhhcc
Confidence                                                                     22    23356666666643   


Q ss_pred             CeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEec---CCEEEEeecCCeEEEEECcCCCccc------------
Q psy14511        254 TDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWN---GNLLSCGTIGGNILHYDVRTHSDYP------------  318 (488)
Q Consensus       254 ~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~~------------  318 (488)
                      ..++++ ..+-.|++.|+..|...+.+.+|...|.++.|.   .-.|++|+.||.|++||++....+.            
T Consensus       159 cLiA~g-tr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p  237 (397)
T KOG4283|consen  159 CLIAAG-TRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPP  237 (397)
T ss_pred             eEEEEe-cCCCcEEEEeccCCcceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCc
Confidence            345555 999999999999999999999999999999993   4678999999999999997642222            


Q ss_pred             --eeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCc-ccceeee------ee---cCCCCEEEEEccCCCC
Q psy14511        319 --TAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKR-PLGLIVP------KL---KREGRELVTSHGKQDC  385 (488)
Q Consensus       319 --~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~-~~~~~~~------~~---~~~~~~l~~~~g~~~~  385 (488)
                        +.-..|.+.+..++|+.++.++++++ |..+++|+..+++... +....+.      .+   +.+...++.  -..++
T Consensus       238 ~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G~ntl~~~g~~~~n~~~~~~~~~~~~~s~vfv~--~p~~~  315 (397)
T KOG4283|consen  238 ILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNMESGRNTLREFGPIIHNQTTSFAVHIQSMDSDVFVL--FPNDG  315 (397)
T ss_pred             cccccccccceeeeeeecccchhhhhccCccceEEeecccCcccccccccccccccccceEEEeecccceEEE--EecCC
Confidence              22345778899999999999999988 8999999999875421 1111111      11   223333333  23458


Q ss_pred             eEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCC
Q psy14511        386 SLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFP  436 (488)
Q Consensus       386 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~  436 (488)
                      .+.++++-+++.++.+..|-..|.+.++-|+-+...+++.|+.|..|-...
T Consensus       316 ~lall~~~sgs~ir~l~~h~k~i~c~~~~~~fq~~~tg~~d~ni~~w~p~l  366 (397)
T KOG4283|consen  316 SLALLNLLEGSFVRRLSTHLKRINCAAYRPDFEQCFTGDMNGNIYMWSPAL  366 (397)
T ss_pred             eEEEEEccCceEEEeeecccceeeEEeecCchhhhhccccCCccccccccc
Confidence            999999999999999999988999999999999999999999999998743

>KOG0294|consensus

Probab=99.96  E-value=7e-27  Score=187.25  Aligned_cols=263  Identities=21%  Similarity=0.345  Sum_probs=211.0

Q ss_pred             eEEEeecCCeEEEEEcccCc------ccc-----eeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcc
Q psy14511          7 LLSCGTIGGNILHYDVRTHS------DYP-----TAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQV   74 (488)
Q Consensus         7 ~la~g~~dg~i~iwd~~~~~------~~~-----~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~   74 (488)
                      .|++|++...|.=+++.-..      +.+     ..+..|.++|++++.+  |+|+|+|+ |.+|+|||+..   ...+.
T Consensus         3 ~iIvGtYE~~i~Gf~l~~~~~~~~~s~~~~l~~lF~~~aH~~sitavAVs--~~~~aSGssDetI~IYDm~k---~~qlg   77 (362)
T KOG0294|consen    3 EIIVGTYEHVILGFKLDPEPKGCTDSVKPTLKPLFAFSAHAGSITALAVS--GPYVASGSSDETIHIYDMRK---RKQLG   77 (362)
T ss_pred             eEEEeeeeeEEEEEEeccCccccccccceeeeccccccccccceeEEEec--ceeEeccCCCCcEEEEeccc---hhhhc
Confidence            47788888888777765322      111     2347899999999996  99999998 99999999987   34455


Q ss_pred             cccccccceeEEEEecCCC--eEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeee
Q psy14511         75 NNQCHLSAVKAIAWCPWEP--TLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFE  152 (488)
Q Consensus        75 ~~~~h~~~v~~l~~~~~~~--~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (488)
                      .+..|.+.|+++.|.++-.  .|+++..   ||.|.+|+...-.++..++.+...+..+.+.|                 
T Consensus        78 ~ll~HagsitaL~F~~~~S~shLlS~sd---DG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHP-----------------  137 (362)
T KOG0294|consen   78 ILLSHAGSITALKFYPPLSKSHLLSGSD---DGHIIIWRVGSWELLKSLKAHKGQVTDLSIHP-----------------  137 (362)
T ss_pred             ceeccccceEEEEecCCcchhheeeecC---CCcEEEEEcCCeEEeeeecccccccceeEecC-----------------
Confidence            5677999999999998764  6777776   99999999999999999998877665555444                 


Q ss_pred             ccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEE
Q psy14511        153 IDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQL  232 (488)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~  232 (488)
                                                                            ++...++.+.|+.+++||+-.|+...
T Consensus       138 ------------------------------------------------------S~KLALsVg~D~~lr~WNLV~Gr~a~  163 (362)
T KOG0294|consen  138 ------------------------------------------------------SGKLALSVGGDQVLRTWNLVRGRVAF  163 (362)
T ss_pred             ------------------------------------------------------CCceEEEEcCCceeeeehhhcCccce
Confidence                                                                  23456778899999999999998877


Q ss_pred             EEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe-cCCEEEEeecCCeEEEEEC
Q psy14511        233 LVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW-NGNLLSCGTIGGNILHYDV  311 (488)
Q Consensus       233 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~i~d~  311 (488)
                      ...+.    ...+.+.|+|.|.+++++ . ...|-+|.+.+......+.. ...+.++.| ++..+++|..|+.|.+||.
T Consensus       164 v~~L~----~~at~v~w~~~Gd~F~v~-~-~~~i~i~q~d~A~v~~~i~~-~~r~l~~~~l~~~~L~vG~d~~~i~~~D~  236 (362)
T KOG0294|consen  164 VLNLK----NKATLVSWSPQGDHFVVS-G-RNKIDIYQLDNASVFREIEN-PKRILCATFLDGSELLVGGDNEWISLKDT  236 (362)
T ss_pred             eeccC----CcceeeEEcCCCCEEEEE-e-ccEEEEEecccHhHhhhhhc-cccceeeeecCCceEEEecCCceEEEecc
Confidence            77753    234559999999998888 3 45688999888666655543 356777777 8999999999999999999


Q ss_pred             cCCCccceeeecCCccEEEEEE--ccCCcEEEEEe-cCeEEEEECCCC
Q psy14511        312 RTHSDYPTAITREGDVVCGLKW--SPNGRYLASGS-NNTVKIWDFRQL  356 (488)
Q Consensus       312 ~~~~~~~~~~~~~~~~i~~~~~--s~~~~~l~~~~-d~~i~iwd~~~~  356 (488)
                      .. ..+...+.+|..+|.++.+  .|++.+|++++ ||.|++||++..
T Consensus       237 ds-~~~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~  283 (362)
T KOG0294|consen  237 DS-DTPLTEFLAHENRVKDIASYTNPEHEYLVTASSDGFIKVWDIDME  283 (362)
T ss_pred             CC-CccceeeecchhheeeeEEEecCCceEEEEeccCceEEEEEcccc
Confidence            87 4688899999999999884  56788999998 799999999865

>KOG0288|consensus

Probab=99.96  E-value=1.3e-28  Score=204.05  Aligned_cols=262  Identities=15%  Similarity=0.317  Sum_probs=206.9

Q ss_pred             CCceEEEeecCCeEEEEEcccCc-ccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCccccccccc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHS-DYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLS   81 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~-~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~   81 (488)
                      +...|++|+.|..|++|++...+ .....+.|..++|+.+.|.++++++++++ |+.+++|++..   .+...++.+|+.
T Consensus       186 ~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~---~r~~~TLsGHtd  262 (459)
T KOG0288|consen  186 NSDTLATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDS---LRLRHTLSGHTD  262 (459)
T ss_pred             CcchhhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCCCceeeeeccc---hhhhhhhccccc
Confidence            55789999999999999998665 23456788889999999999999888877 99999999987   456677899999


Q ss_pred             ceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecc
Q psy14511         82 AVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQ  161 (488)
Q Consensus        82 ~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (488)
                      .|+++.|...... +++++  .|.+|+.||+....+..++...+.                                   
T Consensus       263 kVt~ak~~~~~~~-vVsgs--~DRtiK~WDl~k~~C~kt~l~~S~-----------------------------------  304 (459)
T KOG0288|consen  263 KVTAAKFKLSHSR-VVSGS--ADRTIKLWDLQKAYCSKTVLPGSQ-----------------------------------  304 (459)
T ss_pred             ceeeehhhccccc-eeecc--ccchhhhhhhhhhheecccccccc-----------------------------------
Confidence            9999999887655 55555  399999999998776655433211                                   


Q ss_pred             ccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCC
Q psy14511        162 SKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDN  241 (488)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~  241 (488)
                                                             +..+......++++-.|++|++||.++.........    .
T Consensus       305 ---------------------------------------cnDI~~~~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~----g  341 (459)
T KOG0288|consen  305 ---------------------------------------CNDIVCSISDVISGHFDKKVRFWDIRSADKTRSVPL----G  341 (459)
T ss_pred             ---------------------------------------ccceEecceeeeecccccceEEEeccCCceeeEeec----C
Confidence                                                   000111123456666999999999999988777764    4


Q ss_pred             CceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccc----cccEEEEEe--cCCEEEEeecCCeEEEEECcCCC
Q psy14511        242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTH----MHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHS  315 (488)
Q Consensus       242 ~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~----~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~  315 (488)
                      +.|+++..++++..++++ +.|.++.+.|+++.+....+.+.    ....+.+.|  ++.++++|+.||.|+||++.+++
T Consensus       342 g~vtSl~ls~~g~~lLss-sRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgK  420 (459)
T KOG0288|consen  342 GRVTSLDLSMDGLELLSS-SRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGK  420 (459)
T ss_pred             cceeeEeeccCCeEEeee-cCCCceeeeecccccEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEccCce
Confidence            489999999999999999 99999999999998777776532    123455555  89999999999999999999875


Q ss_pred             ccceeeecCCc--cEEEEEEccCCcEEEEEe-cCeEEEE
Q psy14511        316 DYPTAITREGD--VVCGLKWSPNGRYLASGS-NNTVKIW  351 (488)
Q Consensus       316 ~~~~~~~~~~~--~i~~~~~s~~~~~l~~~~-d~~i~iw  351 (488)
                       +...+.....  .|++++|+|.|..|++++ ++.+.+|
T Consensus       421 -lE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW  458 (459)
T KOG0288|consen  421 -LEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLW  458 (459)
T ss_pred             -EEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEec
Confidence             4444443333  599999999999999998 4888888

>KOG0294|consensus

Probab=99.96  E-value=1.7e-26  Score=185.03  Aligned_cols=211  Identities=17%  Similarity=0.232  Sum_probs=169.7

Q ss_pred             CCCceEEEEEcCCCC--eEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCC
Q psy14511        240 DNAYISCVAWKPRTT--DLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHS  315 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~--~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~  315 (488)
                      |.+.|+++.|.+...  .|+++ +.||.|.+|+.....++..+++|.+.|+.++.  .+++.++.+.|+.++.||+-+++
T Consensus        82 HagsitaL~F~~~~S~shLlS~-sdDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr  160 (362)
T KOG0294|consen   82 HAGSITALKFYPPLSKSHLLSG-SDDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGR  160 (362)
T ss_pred             cccceEEEEecCCcchhheeee-cCCCcEEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCc
Confidence            778899999998765  88888 99999999999999999999999999999998  68999999999999999998876


Q ss_pred             ccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCccccee---eeeecCCCCEEEEEccCCCCeEEEEeC
Q psy14511        316 DYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLI---VPKLKREGRELVTSHGKQDCSLKMWEY  392 (488)
Q Consensus       316 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~l~~~~g~~~~~i~i~d~  392 (488)
                      .....-..+.  ...+.|+|.|.+++......|-+|.+.+......+...   .++---++..|++  |.+|+.|.+||.
T Consensus       161 ~a~v~~L~~~--at~v~w~~~Gd~F~v~~~~~i~i~q~d~A~v~~~i~~~~r~l~~~~l~~~~L~v--G~d~~~i~~~D~  236 (362)
T KOG0294|consen  161 VAFVLNLKNK--ATLVSWSPQGDHFVVSGRNKIDIYQLDNASVFREIENPKRILCATFLDGSELLV--GGDNEWISLKDT  236 (362)
T ss_pred             cceeeccCCc--ceeeEEcCCCCEEEEEeccEEEEEecccHhHhhhhhccccceeeeecCCceEEE--ecCCceEEEecc
Confidence            4333322333  33499999999999999899999999887554443332   2233446677777  899999999999


Q ss_pred             CCcceeEEEeeccccEEEEEE--cCCCCEEEEEeCCCcEEEEecCCCCcc-----ccccccCCcceEEee
Q psy14511        393 PRLHLIEELKIHQERILSAVL--SPDQTCVAAASADETISIWNCFPRDKK-----RKARQVGSGSSLEFA  455 (488)
Q Consensus       393 ~~~~~~~~~~~~~~~v~~~~~--s~~~~~l~t~~~dg~v~iw~~~~~~~~-----~~~~~~~~v~~~~~s  455 (488)
                      .+..++..+.+|..+|-++.+  .|++.+|+|+|.||.|++||++.....     .......+.+|+...
T Consensus       237 ds~~~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~~k~~~~~l~e~n~~~RltCl~~~  306 (362)
T KOG0294|consen  237 DSDTPLTEFLAHENRVKDIASYTNPEHEYLVTASSDGFIKVWDIDMETKKRPTLLAELNTNVRLTCLRVK  306 (362)
T ss_pred             CCCccceeeecchhheeeeEEEecCCceEEEEeccCceEEEEEccccccCCcceeEEeecCCccceeeeh
Confidence            999999999999999999984  457889999999999999999876332     223334555555544

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.96  E-value=9.8e-26  Score=200.54  Aligned_cols=286  Identities=14%  Similarity=0.119  Sum_probs=194.7

Q ss_pred             CceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEE-EEec-CCeEEEEeccccCcCCCcccccccccc
Q psy14511          5 GNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYL-ASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSA   82 (488)
Q Consensus         5 g~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~l-as~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~   82 (488)
                      ++++++++.|+.|.+||+.+++.+ ..+..|. .+.+++|+|+|+.+ ++++ ++.|++||..+++...   .+..+. .
T Consensus         1 ~~~~~s~~~d~~v~~~d~~t~~~~-~~~~~~~-~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~---~~~~~~-~   74 (300)
T TIGR03866         1 EKAYVSNEKDNTISVIDTATLEVT-RTFPVGQ-RPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIG---TLPSGP-D   74 (300)
T ss_pred             CcEEEEecCCCEEEEEECCCCceE-EEEECCC-CCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEE---eccCCC-C
Confidence            467899999999999999888744 4455554 46789999999976 4555 8999999998754332   223232 3


Q ss_pred             eeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccc
Q psy14511         83 VKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQS  162 (488)
Q Consensus        83 v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (488)
                      +..++|+|+++.+++++..  ++.+++||+.+++.+..+.                                        
T Consensus        75 ~~~~~~~~~g~~l~~~~~~--~~~l~~~d~~~~~~~~~~~----------------------------------------  112 (300)
T TIGR03866        75 PELFALHPNGKILYIANED--DNLVTVIDIETRKVLAEIP----------------------------------------  112 (300)
T ss_pred             ccEEEECCCCCEEEEEcCC--CCeEEEEECCCCeEEeEee----------------------------------------
Confidence            5678999999888777653  8899999987654321110                                        


Q ss_pred             cccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCC
Q psy14511        163 KRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNA  242 (488)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~  242 (488)
                                                                                                   ...
T Consensus       113 -----------------------------------------------------------------------------~~~  115 (300)
T TIGR03866       113 -----------------------------------------------------------------------------VGV  115 (300)
T ss_pred             -----------------------------------------------------------------------------CCC
Confidence                                                                                         112


Q ss_pred             ceEEEEEcCCCCeEEEEeCCC-CcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEE-eecCCeEEEEECcCCCccc
Q psy14511        243 YISCVAWKPRTTDLAVTNTCT-EYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSC-GTIGGNILHYDVRTHSDYP  318 (488)
Q Consensus       243 ~i~~~~~~~~~~~l~~~~~~~-~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~-~~~dg~i~i~d~~~~~~~~  318 (488)
                      .+.+++|+|+++.++++ ..+ ..+..||..+++....+... .....+.|  +++.+++ +..++.|++||+++++ ..
T Consensus       116 ~~~~~~~~~dg~~l~~~-~~~~~~~~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~-~~  192 (300)
T TIGR03866       116 EPEGMAVSPDGKIVVNT-SETTNMAHFIDTKTYEIVDNVLVD-QRPRFAEFTADGKELWVSSEIGGTVSVIDVATRK-VI  192 (300)
T ss_pred             CcceEEECCCCCEEEEE-ecCCCeEEEEeCCCCeEEEEEEcC-CCccEEEECCCCCEEEEEcCCCCEEEEEEcCcce-ee
Confidence            35678999999999988 554 45777898887665544322 23355666  6777754 4568999999998753 22


Q ss_pred             eeeecCC-------ccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEe
Q psy14511        319 TAITREG-------DVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWE  391 (488)
Q Consensus       319 ~~~~~~~-------~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d  391 (488)
                      ..+..+.       .....++|+|++++++++.                                     ..++.+.+||
T Consensus       193 ~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~-------------------------------------~~~~~i~v~d  235 (300)
T TIGR03866       193 KKITFEIPGVHPEAVQPVGIKLTKDGKTAFVAL-------------------------------------GPANRVAVVD  235 (300)
T ss_pred             eeeeecccccccccCCccceEECCCCCEEEEEc-------------------------------------CCCCeEEEEE
Confidence            2222111       0123455566665543321                                     2234566666


Q ss_pred             CCCcceeEEEeeccccEEEEEEcCCCCEEEEE-eCCCcEEEEecCCCCccccccccCCcceEEeec
Q psy14511        392 YPRLHLIEELKIHQERILSAVLSPDQTCVAAA-SADETISIWNCFPRDKKRKARQVGSGSSLEFAI  456 (488)
Q Consensus       392 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~-~~dg~v~iw~~~~~~~~~~~~~~~~v~~~~~s~  456 (488)
                      +.+++.+..+. +...+.+++|+|+|++|+++ +.+|.|++||+.+++.+...........++|+|
T Consensus       236 ~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~  300 (300)
T TIGR03866       236 AKTYEVLDYLL-VGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVIKSIKVGRLPWGVVVRP  300 (300)
T ss_pred             CCCCcEEEEEE-eCCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEcccccceeEeCC
Confidence            66666555443 34568999999999999886 468999999999999876666667778888765

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>PTZ00420 coronin; Provisional

Probab=99.96  E-value=5.9e-26  Score=208.77  Aligned_cols=178  Identities=13%  Similarity=0.257  Sum_probs=130.7

Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCcc
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDY  317 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~  317 (488)
                      |...|.+++|+|++..++++++.|+.|++||+++++.+..+. |...|.+++|  +|.+|++++.|+.|++||++++. .
T Consensus       124 H~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~-~  201 (568)
T PTZ00420        124 HKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQE-I  201 (568)
T ss_pred             CCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCc-E
Confidence            788999999999998765443899999999999988777775 5678999999  78999999999999999999864 5


Q ss_pred             ceeeecCCccEEE-----EEEccCCcEEEEEe-cC----eEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeE
Q psy14511        318 PTAITREGDVVCG-----LKWSPNGRYLASGS-NN----TVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSL  387 (488)
Q Consensus       318 ~~~~~~~~~~i~~-----~~~s~~~~~l~~~~-d~----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i  387 (488)
                      ...+.+|.+.+..     ..|++++.+|++++ ++    .|+|||+++.                               
T Consensus       202 i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~-------------------------------  250 (568)
T PTZ00420        202 ASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNT-------------------------------  250 (568)
T ss_pred             EEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCC-------------------------------
Confidence            5677888765433     23457777777765 32    4555555432                               


Q ss_pred             EEEeCCCcceeEEEe--eccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccc--cccccCCcceEEeecC
Q psy14511        388 KMWEYPRLHLIEELK--IHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKR--KARQVGSGSSLEFAIL  457 (488)
Q Consensus       388 ~i~d~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~--~~~~~~~v~~~~~s~~  457 (488)
                             .+++..+.  .+.+.+......+++.++++|+.|+.|++|++..+....  ...+..+..+++|.|.
T Consensus       251 -------~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~~~~~~~l~~~~s~~p~~g~~f~Pk  317 (568)
T PTZ00420        251 -------TSALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNCRYYQHSLGSIRKVNEYKSCSPFRSFGFLPK  317 (568)
T ss_pred             -------CCceEEEEecCCccceEEeeeCCCCCEEEEEECCCeEEEEEccCCcEEeecccccCCCccceEEccc
Confidence                   23333322  233444444445678999999999999999998775432  3445677888999995

>KOG0646|consensus

Probab=99.96  E-value=6.2e-27  Score=197.31  Aligned_cols=242  Identities=16%  Similarity=0.225  Sum_probs=198.6

Q ss_pred             cEEEEE-CCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEE
Q psy14511        210 DTLAVA-LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVI  288 (488)
Q Consensus       210 ~~~~~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~  288 (488)
                      .++++. ....+.+|.+...........   -.+++.+++-+|.|.+++.+ +..|.|++|.+.+|..+..+.+|-..|+
T Consensus        52 yllsaq~~rp~l~vw~i~k~~~~~q~~v---~Pg~v~al~s~n~G~~l~ag-~i~g~lYlWelssG~LL~v~~aHYQ~IT  127 (476)
T KOG0646|consen   52 YLLSAQLKRPLLHVWEILKKDQVVQYIV---LPGPVHALASSNLGYFLLAG-TISGNLYLWELSSGILLNVLSAHYQSIT  127 (476)
T ss_pred             heeeecccCccccccccCchhhhhhhcc---cccceeeeecCCCceEEEee-cccCcEEEEEeccccHHHHHHhhcccee
Confidence            344444 455788898876554331111   45689999999999888888 8999999999999999999999999999


Q ss_pred             EEEe--cCCEEEEeecCCeEEEEECcC--------CCccceeeecCCccEEEEEEccCC--cEEEEEe-cCeEEEEECCC
Q psy14511        289 AMCW--NGNLLSCGTIGGNILHYDVRT--------HSDYPTAITREGDVVCGLKWSPNG--RYLASGS-NNTVKIWDFRQ  355 (488)
Q Consensus       289 ~~~~--~~~~l~~~~~dg~i~i~d~~~--------~~~~~~~~~~~~~~i~~~~~s~~~--~~l~~~~-d~~i~iwd~~~  355 (488)
                      ++.|  |+.++++|+.||.|.+|.+..        ...+...+..|.-+|+++...+.|  .+|++++ |.++++||+..
T Consensus       128 cL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~  207 (476)
T KOG0646|consen  128 CLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSL  207 (476)
T ss_pred             EEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEecc
Confidence            9999  799999999999999998742        124677889999999999887754  5788888 79999999998


Q ss_pred             CCCCccccee----eeeecCCCCEEEEEccCCCCeEEEEeCCCc----------------ceeEEEeeccc--cEEEEEE
Q psy14511        356 LDAKRPLGLI----VPKLKREGRELVTSHGKQDCSLKMWEYPRL----------------HLIEELKIHQE--RILSAVL  413 (488)
Q Consensus       356 ~~~~~~~~~~----~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~----------------~~~~~~~~~~~--~v~~~~~  413 (488)
                      +.....+...    ..+.+|-++.+++  |..+|.|.+.++...                ..+..+.+|.+  +|++++.
T Consensus       208 g~LLlti~fp~si~av~lDpae~~~yi--Gt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLai  285 (476)
T KOG0646|consen  208 GVLLLTITFPSSIKAVALDPAERVVYI--GTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAI  285 (476)
T ss_pred             ceeeEEEecCCcceeEEEcccccEEEe--cCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEE
Confidence            8654433322    2288899999999  999999998887432                23456778988  9999999


Q ss_pred             cCCCCEEEEEeCCCcEEEEecCCCCcccccc-ccCCcceEEeecC
Q psy14511        414 SPDQTCVAAASADETISIWNCFPRDKKRKAR-QVGSGSSLEFAIL  457 (488)
Q Consensus       414 s~~~~~l~t~~~dg~v~iw~~~~~~~~~~~~-~~~~v~~~~~s~~  457 (488)
                      +-||..|++|+.||.|+|||+.+.+.++... ..++|+.+.+.|-
T Consensus       286 s~DgtlLlSGd~dg~VcvWdi~S~Q~iRtl~~~kgpVtnL~i~~~  330 (476)
T KOG0646|consen  286 STDGTLLLSGDEDGKVCVWDIYSKQCIRTLQTSKGPVTNLQINPL  330 (476)
T ss_pred             ecCccEEEeeCCCCCEEEEecchHHHHHHHhhhccccceeEeecc
Confidence            9999999999999999999999999987766 8899999999664

>KOG2055|consensus

Probab=99.96  E-value=9.1e-27  Score=195.96  Aligned_cols=280  Identities=14%  Similarity=0.231  Sum_probs=218.8

Q ss_pred             CceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCC-eEEeeeCCcccceEEEEecC
Q psy14511         36 GDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEP-TLLATGGGICDQTVRLWNSM  113 (488)
Q Consensus        36 ~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~-~l~~~~~~~~d~~i~vwd~~  113 (488)
                      .+.|+++.|+|...+|.+++ |+.++||.++. +....++.+.--..+|.+.+|.|+|. .+++++.   ...++.||+.
T Consensus       213 ~~~I~sv~FHp~~plllvaG~d~~lrifqvDG-k~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~r---rky~ysyDle  288 (514)
T KOG2055|consen  213 HGGITSVQFHPTAPLLLVAGLDGTLRIFQVDG-KVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGR---RKYLYSYDLE  288 (514)
T ss_pred             cCCceEEEecCCCceEEEecCCCcEEEEEecC-ccChhheeeeeccCccceeeecCCCceEEEeccc---ceEEEEeecc
Confidence            35799999999999999999 99999999984 44445555555667999999999999 5555554   8889999997


Q ss_pred             CCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCC
Q psy14511        114 NGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAP  193 (488)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (488)
                      +.+....-                                                                        
T Consensus       289 ~ak~~k~~------------------------------------------------------------------------  296 (514)
T KOG2055|consen  289 TAKVTKLK------------------------------------------------------------------------  296 (514)
T ss_pred             cccccccc------------------------------------------------------------------------
Confidence            76632110                                                                        


Q ss_pred             CccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCc
Q psy14511        194 SIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE  273 (488)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~  273 (488)
                                                               ...+.....+.....+|++++|++. +..|.|.+....+
T Consensus       297 -----------------------------------------~~~g~e~~~~e~FeVShd~~fia~~-G~~G~I~lLhakT  334 (514)
T KOG2055|consen  297 -----------------------------------------PPYGVEEKSMERFEVSHDSNFIAIA-GNNGHIHLLHAKT  334 (514)
T ss_pred             -----------------------------------------CCCCcccchhheeEecCCCCeEEEc-ccCceEEeehhhh
Confidence                                                     1111022345667789999999999 9999999999999


Q ss_pred             ceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCC-ccEEEEEEccCCcEEEEEec-CeEE
Q psy14511        274 ERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREG-DVVCGLKWSPNGRYLASGSN-NTVK  349 (488)
Q Consensus       274 ~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~~i~~~~~s~~~~~l~~~~d-~~i~  349 (488)
                      ++.+..++ ..+.+..++|  +++.|++.+.+|.|++||++... +...+.... -.-++++.++++.+||+|++ |.|.
T Consensus       335 ~eli~s~K-ieG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~-~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVN  412 (514)
T KOG2055|consen  335 KELITSFK-IEGVVSDFTFSSDSKELLASGGTGEVYVWNLRQNS-CLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVN  412 (514)
T ss_pred             hhhhheee-eccEEeeEEEecCCcEEEEEcCCceEEEEecCCcc-eEEEEeecCccceeeeeecCCCceEEeccCcceEE
Confidence            98888886 4678899999  78999999999999999999863 444444322 22357788899999999998 9999


Q ss_pred             EEECCCC---CCCccccee------ee--eecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeec---cccEEEEEEcC
Q psy14511        350 IWDFRQL---DAKRPLGLI------VP--KLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIH---QERILSAVLSP  415 (488)
Q Consensus       350 iwd~~~~---~~~~~~~~~------~~--~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~---~~~v~~~~~s~  415 (488)
                      |||..+.   ..++++..+      +.  .|++|++.|+.++...+..+++-.+++......+...   -+.|++++|||
T Consensus       413 IYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP  492 (514)
T KOG2055|consen  413 IYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSP  492 (514)
T ss_pred             EeccchhhccCCCCchhhhhhhheeeeeeeeCcchhhhhhhhhccccceEEEeccceeeeccCCCCCCcccceEEEEecC
Confidence            9997653   233444333      22  9999999999988888899999999887766655543   34689999999


Q ss_pred             CCCEEEEEeCCCcEEEEecC
Q psy14511        416 DQTCVAAASADETISIWNCF  435 (488)
Q Consensus       416 ~~~~l~t~~~dg~v~iw~~~  435 (488)
                      .+.+||.|..+|.+.+|.+.
T Consensus       493 ~sG~lAvGNe~grv~l~kL~  512 (514)
T KOG2055|consen  493 NSGYLAVGNEAGRVHLFKLH  512 (514)
T ss_pred             CCceEEeecCCCceeeEeec
Confidence            99999999999999999874

>KOG0264|consensus

Probab=99.96  E-value=3.6e-27  Score=198.27  Aligned_cols=268  Identities=18%  Similarity=0.363  Sum_probs=204.4

Q ss_pred             cccCceEEEEEEccCCc-EEEEec-CCeEEEEeccccCcC-------CCcccccccccceeEEEEecCCCeEEeeeCCcc
Q psy14511         33 TREGDVVCGLKWSPNGR-YLASGS-NNTVKIWDFRQLDAK-------RPQVNNQCHLSAVKAIAWCPWEPTLLATGGGIC  103 (488)
Q Consensus        33 ~~h~~~V~~l~~sp~g~-~las~~-d~~i~vwd~~~~~~~-------~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~  103 (488)
                      -.|.+.|+.+..-|... .+|+.+ .+.|.|||..+....       ++-..+.+|.+.=.+|+|++..+..+.+++.  
T Consensus       121 i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~--  198 (422)
T KOG0264|consen  121 INHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSD--  198 (422)
T ss_pred             ccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccC--
Confidence            35888999999999765 455555 899999998753222       2233678898877889999876655555554  


Q ss_pred             cceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeeccccccccccc
Q psy14511        104 DQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVK  183 (488)
Q Consensus       104 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (488)
                      |++|++||+.......                                                                
T Consensus       199 d~~i~lwdi~~~~~~~----------------------------------------------------------------  214 (422)
T KOG0264|consen  199 DHTICLWDINAESKED----------------------------------------------------------------  214 (422)
T ss_pred             CCcEEEEeccccccCC----------------------------------------------------------------
Confidence            9999999986543210                                                                


Q ss_pred             CCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCC
Q psy14511        184 AKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCT  263 (488)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~  263 (488)
                                                                  ........+.+ |...|..++|++-...++.+++.|
T Consensus       215 --------------------------------------------~~~~p~~~~~~-h~~~VeDV~~h~~h~~lF~sv~dd  249 (422)
T KOG0264|consen  215 --------------------------------------------KVVDPKTIFSG-HEDVVEDVAWHPLHEDLFGSVGDD  249 (422)
T ss_pred             --------------------------------------------ccccceEEeec-CCcceehhhccccchhhheeecCC
Confidence                                                        00011112223 889999999999887776666999


Q ss_pred             CcEEEEECC--cceeeeeeccccccEEEEEe---cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCC-
Q psy14511        264 EYIDLWHEQ--EERLIQKLRTHMHQVIAMCW---NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNG-  337 (488)
Q Consensus       264 ~~i~i~d~~--~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~-  337 (488)
                      +.+.|||++  +.++.....+|.+++.+++|   ++..||+|+.|++|.+||+++...++..+.+|...|..+.|||.. 
T Consensus       250 ~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~e  329 (422)
T KOG0264|consen  250 GKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNE  329 (422)
T ss_pred             CeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCC
Confidence            999999999  55667777899999999999   578999999999999999999989999999999999999999976 


Q ss_pred             cEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCC
Q psy14511        338 RYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPD  416 (488)
Q Consensus       338 ~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~  416 (488)
                      ..||+++ |+.+.+||+......+.-.                 -..+|        -.+++..-.||...|..+.|+|+
T Consensus       330 tvLASSg~D~rl~vWDls~ig~eq~~e-----------------da~dg--------ppEllF~HgGH~~kV~DfsWnp~  384 (422)
T KOG0264|consen  330 TVLASSGTDRRLNVWDLSRIGEEQSPE-----------------DAEDG--------PPELLFIHGGHTAKVSDFSWNPN  384 (422)
T ss_pred             ceeEecccCCcEEEEeccccccccChh-----------------hhccC--------CcceeEEecCcccccccccCCCC
Confidence            4666666 7999999998652221100                 00111        13566777899999999999998


Q ss_pred             CC-EEEEEeCCCcEEEEecCC
Q psy14511        417 QT-CVAAASADETISIWNCFP  436 (488)
Q Consensus       417 ~~-~l~t~~~dg~v~iw~~~~  436 (488)
                      .. .+++++.|+.+.||++..
T Consensus       385 ePW~I~SvaeDN~LqIW~~s~  405 (422)
T KOG0264|consen  385 EPWTIASVAEDNILQIWQMAE  405 (422)
T ss_pred             CCeEEEEecCCceEEEeeccc
Confidence            76 567889999999999873

>KOG0643|consensus

Probab=99.96  E-value=1.4e-25  Score=175.71  Aligned_cols=275  Identities=17%  Similarity=0.256  Sum_probs=218.5

Q ss_pred             ccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccc
Q psy14511         76 NQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDR  155 (488)
Q Consensus        76 ~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (488)
                      +++|..+++.+.|+.+|..|++++.   |.+..+|-..+|+.+.+..                                 
T Consensus         6 l~GHERplTqiKyN~eGDLlFscaK---D~~~~vw~s~nGerlGty~---------------------------------   49 (327)
T KOG0643|consen    6 LQGHERPLTQIKYNREGDLLFSCAK---DSTPTVWYSLNGERLGTYD---------------------------------   49 (327)
T ss_pred             cccCccccceEEecCCCcEEEEecC---CCCceEEEecCCceeeeec---------------------------------
Confidence            7899999999999999998888876   9999999887777543332                                 


Q ss_pred             cceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEe
Q psy14511        156 KKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVE  235 (488)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~  235 (488)
                                                                                                      
T Consensus        50 --------------------------------------------------------------------------------   49 (327)
T KOG0643|consen   50 --------------------------------------------------------------------------------   49 (327)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeec-----CCeEEE
Q psy14511        236 YPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTI-----GGNILH  308 (488)
Q Consensus       236 ~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~-----dg~i~i  308 (488)
                        + |.+.|.|+..+.+.+.++++ +.|.++++||..+++++..++ ...+|..+.|  +|++++....     .+.|.+
T Consensus        50 --G-HtGavW~~Did~~s~~liTG-SAD~t~kLWDv~tGk~la~~k-~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~  124 (327)
T KOG0643|consen   50 --G-HTGAVWCCDIDWDSKHLITG-SADQTAKLWDVETGKQLATWK-TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSV  124 (327)
T ss_pred             --C-CCceEEEEEecCCcceeeec-cccceeEEEEcCCCcEEEEee-cCCeeEEEeeccCCcEEEEEehhhcCcceEEEE
Confidence              2 88899999999999999999 999999999999999999986 4677888888  6777776654     367999


Q ss_pred             EECcCC------CccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCccccee----ee--eecCCCCE
Q psy14511        309 YDVRTH------SDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLI----VP--KLKREGRE  375 (488)
Q Consensus       309 ~d~~~~------~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~----~~--~~~~~~~~  375 (488)
                      +|++..      +.+...+..+.+.++.+-|.|-+++|++|. +|.|.+||+++++........    ++  .+++|..+
T Consensus       125 fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~  204 (327)
T KOG0643|consen  125 FDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTY  204 (327)
T ss_pred             EEccCChhhhcccCceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcce
Confidence            999843      245667777888999999999999999999 599999999987433222111    22  99999999


Q ss_pred             EEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCc--E------------EEEecCCCCcc-
Q psy14511        376 LVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADET--I------------SIWNCFPRDKK-  440 (488)
Q Consensus       376 l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~--v------------~iw~~~~~~~~-  440 (488)
                      +++  ++.|.+-++||+.+.+.+.++. -..||++.+++|....++.|+....  |            ++|++-..+.. 
T Consensus       205 FiT--~s~Dttakl~D~~tl~v~Kty~-te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEig  281 (327)
T KOG0643|consen  205 FIT--GSKDTTAKLVDVRTLEVLKTYT-TERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIG  281 (327)
T ss_pred             EEe--cccCccceeeeccceeeEEEee-ecccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhc
Confidence            999  8999999999999999988887 5678999999998777776654322  1            22222222222 


Q ss_pred             ccccccCCcceEEeecCCCceEEEEeeecccccceeeEEEE
Q psy14511        441 RKARQVGSGSSLEFAILKQPVSLTALLRSRAVEKQQHAIAY  481 (488)
Q Consensus       441 ~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~  481 (488)
                      +..+|-+++.+++|+|+|+..       +++.|+.-+.+.+
T Consensus       282 rvkGHFGPINsvAfhPdGksY-------sSGGEDG~VR~h~  315 (327)
T KOG0643|consen  282 RVKGHFGPINSVAFHPDGKSY-------SSGGEDGYVRLHH  315 (327)
T ss_pred             cccccccCcceeEECCCCccc-------ccCCCCceEEEEE
Confidence            457899999999999999998       6677777766644

>KOG0641|consensus

Probab=99.96  E-value=4.1e-25  Score=168.93  Aligned_cols=285  Identities=21%  Similarity=0.340  Sum_probs=216.9

Q ss_pred             ccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCc--------CC----CcccccccccceeEEEEecCCCeEEeeeC
Q psy14511         34 REGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDA--------KR----PQVNNQCHLSAVKAIAWCPWEPTLLATGG  100 (488)
Q Consensus        34 ~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~--------~~----~~~~~~~h~~~v~~l~~~~~~~~l~~~~~  100 (488)
                      .....|.+++|+|.|.+.|.|+ ..+.+|-.......        ..    .....+.|.+.|.|.+|+|+|+ |+++|+
T Consensus        30 ~dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~ge-liatgs  108 (350)
T KOG0641|consen   30 EDSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCGE-LIATGS  108 (350)
T ss_pred             cchhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCccC-eEEecC
Confidence            4556799999999999999999 67777764432100        01    1122456899999999999996 566676


Q ss_pred             CcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccc
Q psy14511        101 GICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPR  180 (488)
Q Consensus       101 ~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (488)
                      .  |++|++.-.+...+.  .                                                           
T Consensus       109 n--dk~ik~l~fn~dt~~--~-----------------------------------------------------------  125 (350)
T KOG0641|consen  109 N--DKTIKVLPFNADTCN--A-----------------------------------------------------------  125 (350)
T ss_pred             C--CceEEEEeccccccc--c-----------------------------------------------------------
Confidence            4  999998876543211  0                                                           


Q ss_pred             cccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCC----CCeE
Q psy14511        181 KVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPR----TTDL  256 (488)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~l  256 (488)
                                                                    ++.. ..+.+   |.+.|..++|..+    +..|
T Consensus       126 ----------------------------------------------~g~d-le~nm---hdgtirdl~fld~~~s~~~il  155 (350)
T KOG0641|consen  126 ----------------------------------------------TGHD-LEFNM---HDGTIRDLAFLDDPESGGAIL  155 (350)
T ss_pred             ----------------------------------------------cCcc-eeeee---cCCceeeeEEecCCCcCceEE
Confidence                                                          0000 01122   7888889988643    4567


Q ss_pred             EEEeCCCCcEEEEECCcceeeeeeccccccEEEE-EecCCEEEEeecCCeEEEEECcCCCccceeeec-------CCccE
Q psy14511        257 AVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAM-CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITR-------EGDVV  328 (488)
Q Consensus       257 ~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~-~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-------~~~~i  328 (488)
                      +++|..|..|++-|-..++..+.+.+|.+.|.++ .|++-.+++|+.|.+|++||++-+. ++..+..       ..+.|
T Consensus       156 ~s~gagdc~iy~tdc~~g~~~~a~sghtghilalyswn~~m~~sgsqdktirfwdlrv~~-~v~~l~~~~~~~glessav  234 (350)
T KOG0641|consen  156 ASAGAGDCKIYITDCGRGQGFHALSGHTGHILALYSWNGAMFASGSQDKTIRFWDLRVNS-CVNTLDNDFHDGGLESSAV  234 (350)
T ss_pred             EecCCCcceEEEeecCCCCcceeecCCcccEEEEEEecCcEEEccCCCceEEEEeeeccc-eeeeccCcccCCCccccee
Confidence            7776678888888999999999999999999886 4599999999999999999998753 3333221       23568


Q ss_pred             EEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceee-----eeecCCCCEEEEEccCCCCeEEEEeCCCc----cee
Q psy14511        329 CGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIV-----PKLKREGRELVTSHGKQDCSLKMWEYPRL----HLI  398 (488)
Q Consensus       329 ~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~g~~~~~i~i~d~~~~----~~~  398 (488)
                      .+++..|.|++|+++- |....+||++.+...+.+....     ..|+|...++++  ++.|..|++-|++..    -++
T Consensus       235 aav~vdpsgrll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a~yllt--~syd~~ikltdlqgdla~el~~  312 (350)
T KOG0641|consen  235 AAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLT--CSYDMKIKLTDLQGDLAHELPI  312 (350)
T ss_pred             EEEEECCCcceeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCceEEEE--ecccceEEEeecccchhhcCce
Confidence            9999999999999999 6999999999886555544332     299999999999  799999999998642    233


Q ss_pred             EEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecC
Q psy14511        399 EELKIHQERILSAVLSPDQTCVAAASADETISIWNCF  435 (488)
Q Consensus       399 ~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~  435 (488)
                      .....|...+..+.|+|..-.+++.+.|.++.+|-++
T Consensus       313 ~vv~ehkdk~i~~rwh~~d~sfisssadkt~tlwa~~  349 (350)
T KOG0641|consen  313 MVVAEHKDKAIQCRWHPQDFSFISSSADKTATLWALN  349 (350)
T ss_pred             EEEEeccCceEEEEecCccceeeeccCcceEEEeccC
Confidence            4556799999999999999999999999999999765

>KOG0299|consensus

Probab=99.96  E-value=7.9e-27  Score=196.31  Aligned_cols=217  Identities=15%  Similarity=0.217  Sum_probs=179.9

Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCcc
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDY  317 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~  317 (488)
                      |...+.+++.++|+++|+++ +.|..|.||+.++.+.++.+.+|.+.|.+++|  ....+++++.|+.+++|++... ..
T Consensus       201 h~keil~~avS~Dgkylatg-g~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~-s~  278 (479)
T KOG0299|consen  201 HVKEILTLAVSSDGKYLATG-GRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQL-SY  278 (479)
T ss_pred             ccceeEEEEEcCCCcEEEec-CCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHh-HH
Confidence            88899999999999999999 99999999999999999999999999999999  4578999999999999999875 57


Q ss_pred             ceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCccccee----e-eeecCCCCEEEEEccCCCCeEEEEe
Q psy14511        318 PTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLI----V-PKLKREGRELVTSHGKQDCSLKMWE  391 (488)
Q Consensus       318 ~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~----~-~~~~~~~~~l~~~~g~~~~~i~i~d  391 (488)
                      +..+.+|.+.|.++....-++.+.+++ |.++++|++....  +.+...    + ++---+...+++  |+++|.|.+|+
T Consensus       279 vetlyGHqd~v~~IdaL~reR~vtVGgrDrT~rlwKi~ees--qlifrg~~~sidcv~~In~~Hfvs--GSdnG~IaLWs  354 (479)
T KOG0299|consen  279 VETLYGHQDGVLGIDALSRERCVTVGGRDRTVRLWKIPEES--QLIFRGGEGSIDCVAFINDEHFVS--GSDNGSIALWS  354 (479)
T ss_pred             HHHHhCCccceeeechhcccceEEeccccceeEEEeccccc--eeeeeCCCCCeeeEEEecccceee--ccCCceEEEee
Confidence            888999999999999888888887776 7999999995332  222111    1 122234455666  89999999999


Q ss_pred             CCCcceeEEEe-ec-----------cccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCc----cccccccCCcceEEee
Q psy14511        392 YPRLHLIEELK-IH-----------QERILSAVLSPDQTCVAAASADETISIWNCFPRDK----KRKARQVGSGSSLEFA  455 (488)
Q Consensus       392 ~~~~~~~~~~~-~~-----------~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~----~~~~~~~~~v~~~~~s  455 (488)
                      +.+.+++.+.+ +|           ...|++++..|...++|+|+.+|.|++|.+.++-.    +......+-|.+++|+
T Consensus       355 ~~KKkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~ls~~GfVNsl~f~  434 (479)
T KOG0299|consen  355 LLKKKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRAINLLYSLSLVGFVNSLAFS  434 (479)
T ss_pred             ecccCceeEeeccccccCCccccccccceeeeEecccCceEEecCCCCceEEEEecCCccccceeeecccccEEEEEEEc
Confidence            99988887654 22           12689999999999999999999999999998833    2445577889999999


Q ss_pred             cCCCceE
Q psy14511        456 ILKQPVS  462 (488)
Q Consensus       456 ~~~~~~~  462 (488)
                      ++|+.+.
T Consensus       435 ~sgk~iv  441 (479)
T KOG0299|consen  435 NSGKRIV  441 (479)
T ss_pred             cCCCEEE
Confidence            9999553

>KOG0264|consensus

Probab=99.96  E-value=4.7e-27  Score=197.55  Aligned_cols=239  Identities=21%  Similarity=0.445  Sum_probs=189.7

Q ss_pred             CccCCceEEEeecCCeEEEEEcccCcccce---------eecccCceEEEEEEccCCc-EEEEec-CCeEEEEeccccCc
Q psy14511          1 MCWNGNLLSCGTIGGNILHYDVRTHSDYPT---------AITREGDVVCGLKWSPNGR-YLASGS-NNTVKIWDFRQLDA   69 (488)
Q Consensus         1 ~~~dg~~la~g~~dg~i~iwd~~~~~~~~~---------~~~~h~~~V~~l~~sp~g~-~las~~-d~~i~vwd~~~~~~   69 (488)
                      |++|.+.+|+++..+.|.|||.......+.         ++.+|.+.=..|+|++... .|++++ |++|++||+.....
T Consensus       133 mPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~~i~lwdi~~~~~  212 (422)
T KOG0264|consen  133 MPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDHTICLWDINAESK  212 (422)
T ss_pred             CCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCCCcEEEEecccccc
Confidence            678999999999999999999876443322         6789998778899999544 566666 99999999976433


Q ss_pred             ----CCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEE
Q psy14511         70 ----KRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLS  145 (488)
Q Consensus        70 ----~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (488)
                          ..+...+.+|...|..++|++-...++.+.+.  |+.+.|||++++...                           
T Consensus       213 ~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~d--d~~L~iwD~R~~~~~---------------------------  263 (422)
T KOG0264|consen  213 EDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGD--DGKLMIWDTRSNTSK---------------------------  263 (422)
T ss_pred             CCccccceEEeecCCcceehhhccccchhhheeecC--CCeEEEEEcCCCCCC---------------------------
Confidence                34555678999999999999988888887775  999999999863100                           


Q ss_pred             EEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEEC
Q psy14511        146 FLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNT  225 (488)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~  225 (488)
                                                                                                      
T Consensus       264 --------------------------------------------------------------------------------  263 (422)
T KOG0264|consen  264 --------------------------------------------------------------------------------  263 (422)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCc-ceeeeeeccccccEEEEEe---cCCEEEEee
Q psy14511        226 KTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE-ERLIQKLRTHMHQVIAMCW---NGNLLSCGT  301 (488)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~-~~~~~~~~~~~~~v~~~~~---~~~~l~~~~  301 (488)
                          .  ...... |..++.|++|+|-+..++++++.|++|.+||++. .+++..+.+|...|..+.|   ....|++++
T Consensus       264 ----~--~~~~~a-h~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg  336 (422)
T KOG0264|consen  264 ----P--SHSVKA-HSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSG  336 (422)
T ss_pred             ----C--cccccc-cCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecc
Confidence                0  001111 8899999999998877777669999999999987 4578889999999999999   468999999


Q ss_pred             cCCeEEEEECcCCCc-------------cceeeecCCccEEEEEEccCCcEEE-EEe-cCeEEEEECCC
Q psy14511        302 IGGNILHYDVRTHSD-------------YPTAITREGDVVCGLKWSPNGRYLA-SGS-NNTVKIWDFRQ  355 (488)
Q Consensus       302 ~dg~i~i~d~~~~~~-------------~~~~~~~~~~~i~~~~~s~~~~~l~-~~~-d~~i~iwd~~~  355 (488)
                      .|+.+.+||+..-..             ++..-.+|...|..+.|+|+..+++ +.+ |+.+.||.+..
T Consensus       337 ~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s~  405 (422)
T KOG0264|consen  337 TDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMAE  405 (422)
T ss_pred             cCCcEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeeccc
Confidence            999999999965322             2345567999999999999887655 444 49999998863

>KOG0641|consensus

Probab=99.96  E-value=4.5e-25  Score=168.68  Aligned_cols=277  Identities=16%  Similarity=0.254  Sum_probs=213.5

Q ss_pred             cCCceEEEeecCCeEEEEEccc------C----cccc----eeecccCceEEEEEEccCCcEEEEec-CCeEEEEecccc
Q psy14511          3 WNGNLLSCGTIGGNILHYDVRT------H----SDYP----TAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQL   67 (488)
Q Consensus         3 ~dg~~la~g~~dg~i~iwd~~~------~----~~~~----~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~   67 (488)
                      .+|.+.|+|+...+.+|.....      .    .+.+    +.-+.|.+.|.|.+|||+|.+||+|+ |.+|++..++..
T Consensus        42 p~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~geliatgsndk~ik~l~fn~d  121 (350)
T KOG0641|consen   42 PAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCGELIATGSNDKTIKVLPFNAD  121 (350)
T ss_pred             CCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCccCeEEecCCCceEEEEecccc
Confidence            4799999999999999875432      1    1111    22357999999999999999999999 999999877643


Q ss_pred             Cc--CCCcccccccccceeEEEEecC----CCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccc
Q psy14511         68 DA--KRPQVNNQCHLSAVKAIAWCPW----EPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKR  141 (488)
Q Consensus        68 ~~--~~~~~~~~~h~~~v~~l~~~~~----~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (488)
                      ..  .-.-.++.-|.+.|..++|..+    +..|++.|.+  |..|.+=|-..|+....+.++...+             
T Consensus       122 t~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gag--dc~iy~tdc~~g~~~~a~sghtghi-------------  186 (350)
T KOG0641|consen  122 TCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAG--DCKIYITDCGRGQGFHALSGHTGHI-------------  186 (350)
T ss_pred             cccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCC--cceEEEeecCCCCcceeecCCcccE-------------
Confidence            22  2223346679999999999654    3344444443  8888888888888776666653311             


Q ss_pred             eeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEE
Q psy14511        142 RHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVY  221 (488)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~  221 (488)
                                                                                 .....|++-.+++++.|.+|+
T Consensus       187 -----------------------------------------------------------lalyswn~~m~~sgsqdktir  207 (350)
T KOG0641|consen  187 -----------------------------------------------------------LALYSWNGAMFASGSQDKTIR  207 (350)
T ss_pred             -----------------------------------------------------------EEEEEecCcEEEccCCCceEE
Confidence                                                                       122456666788888999999


Q ss_pred             EEECCCCceEEEEecCC----CCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEec--CC
Q psy14511        222 TWNTKTNKTQLLVEYPT----YDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWN--GN  295 (488)
Q Consensus       222 iw~~~~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~  295 (488)
                      +||++-..++..+....    .....|.+++..|.|+.|+++ -.|....+||++.+++++.+..|...|.++.|.  ..
T Consensus       208 fwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg-~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a~  286 (350)
T KOG0641|consen  208 FWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASG-HADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAH  286 (350)
T ss_pred             EEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeec-cCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCce
Confidence            99999888777654332    123578999999999999999 999999999999999999999999999999994  57


Q ss_pred             EEEEeecCCeEEEEECcCCC---ccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECC
Q psy14511        296 LLSCGTIGGNILHYDVRTHS---DYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFR  354 (488)
Q Consensus       296 ~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~  354 (488)
                      ++++++.|..|++-|+...-   .+......|.+.+..+.|+|..--+++.+ |.++.+|-+.
T Consensus       287 yllt~syd~~ikltdlqgdla~el~~~vv~ehkdk~i~~rwh~~d~sfisssadkt~tlwa~~  349 (350)
T KOG0641|consen  287 YLLTCSYDMKIKLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQDFSFISSSADKTATLWALN  349 (350)
T ss_pred             EEEEecccceEEEeecccchhhcCceEEEEeccCceEEEEecCccceeeeccCcceEEEeccC
Confidence            99999999999999997532   34556678888888999999886666666 7999999753

>KOG1273|consensus

Probab=99.95  E-value=4.5e-26  Score=182.65  Aligned_cols=274  Identities=19%  Similarity=0.360  Sum_probs=196.2

Q ss_pred             EEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCee
Q psy14511         39 VCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKE  117 (488)
Q Consensus        39 V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~  117 (488)
                      -.|+.|++.|.+||+|. ||.|.|||+.+..   .-..+.+|..+|.+++||+||+.|++++.   |..|.+||+..|.+
T Consensus        26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~---iar~lsaH~~pi~sl~WS~dgr~LltsS~---D~si~lwDl~~gs~   99 (405)
T KOG1273|consen   26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFR---IARMLSAHVRPITSLCWSRDGRKLLTSSR---DWSIKLWDLLKGSP   99 (405)
T ss_pred             cceEEeccCcceeeeeccCCcEEEEEccccc---hhhhhhccccceeEEEecCCCCEeeeecC---CceeEEEeccCCCc
Confidence            68999999999999998 9999999999843   44457889999999999999999888887   99999999998886


Q ss_pred             eeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccc
Q psy14511        118 KCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIIN  197 (488)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (488)
                      ++.+...                                                                         
T Consensus       100 l~rirf~-------------------------------------------------------------------------  106 (405)
T KOG1273|consen  100 LKRIRFD-------------------------------------------------------------------------  106 (405)
T ss_pred             eeEEEcc-------------------------------------------------------------------------
Confidence            6555433                                                                         


Q ss_pred             cceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcce--
Q psy14511        198 DFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEER--  275 (488)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~--  275 (488)
                                                                  .+|....|+|..+..++..-.+..-.+-++..++  
T Consensus       107 --------------------------------------------spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~  142 (405)
T KOG1273|consen  107 --------------------------------------------SPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHS  142 (405)
T ss_pred             --------------------------------------------CccceeeeccccCCeEEEEEecCCcEEEEecCCcee
Confidence                                                        3344444444332222221122222222222110  


Q ss_pred             eeeeec-ccccc-EEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCC-ccEEEEEEccCCcEEEEEe-cCeEE
Q psy14511        276 LIQKLR-THMHQ-VIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREG-DVVCGLKWSPNGRYLASGS-NNTVK  349 (488)
Q Consensus       276 ~~~~~~-~~~~~-v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~~i~~~~~s~~~~~l~~~~-d~~i~  349 (488)
                      .+..-. +.... -.+..|  .|+++++|...|.+.+||..+. .++..++-.. ..|..+.++..|++|+.-+ |..|+
T Consensus       143 ~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~t~-e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR  221 (405)
T KOG1273|consen  143 VLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAETL-ECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIR  221 (405)
T ss_pred             eccCCCccccccccccccccCCCCEEEEecCcceEEEEecchh-eeeeeeeechheeeeEEEEeccCcEEEEecCCceEE
Confidence            000000 00000 011134  5899999999999999999986 3555554444 6789999999999999888 79999


Q ss_pred             EEECCCCCCC---------ccccee-------eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeecc-ccEEEEE
Q psy14511        350 IWDFRQLDAK---------RPLGLI-------VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQ-ERILSAV  412 (488)
Q Consensus       350 iwd~~~~~~~---------~~~~~~-------~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~-~~v~~~~  412 (488)
                      .|+++.....         +.++..       ..+|+.+|.++.+++ ..-..++||.-..|.+++.+.|.. ....++.
T Consensus       222 ~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~ccfs~dgeYv~a~s-~~aHaLYIWE~~~GsLVKILhG~kgE~l~DV~  300 (405)
T KOG1273|consen  222 TYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKKCCFSGDGEYVCAGS-ARAHALYIWEKSIGSLVKILHGTKGEELLDVN  300 (405)
T ss_pred             EEehhhhcccCccCCcChhHHHHHHHhhhhhhheeecCCccEEEecc-ccceeEEEEecCCcceeeeecCCchhheeecc
Confidence            9998732211         112222       239999999999864 667889999999999999999887 5678999


Q ss_pred             EcCCCCEEEEEeCCCcEEEEecCCCC
Q psy14511        413 LSPDQTCVAAASADETISIWNCFPRD  438 (488)
Q Consensus       413 ~s~~~~~l~t~~~dg~v~iw~~~~~~  438 (488)
                      |+|-...+++- ..|.+++|.....+
T Consensus       301 whp~rp~i~si-~sg~v~iw~~~~~e  325 (405)
T KOG1273|consen  301 WHPVRPIIASI-ASGVVYIWAVVQVE  325 (405)
T ss_pred             cccceeeeeec-cCCceEEEEeeccc
Confidence            99999888888 68899999987654

>KOG0639|consensus

Probab=99.95  E-value=5.8e-27  Score=199.28  Aligned_cols=279  Identities=20%  Similarity=0.336  Sum_probs=226.7

Q ss_pred             cccCceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCccccccc--ccceeEEEEecCCCeEEeeeCCcccceEEEE
Q psy14511         33 TREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCH--LSAVKAIAWCPWEPTLLATGGGICDQTVRLW  110 (488)
Q Consensus        33 ~~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h--~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vw  110 (488)
                      ..|..-|.++..|...+++.+|+.|.|+|||+.......++..+...  .+-|.++...|||+.|++.|.   -.++.||
T Consensus       416 L~HGEvVcAvtIS~~trhVyTgGkgcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGe---astlsiW  492 (705)
T KOG0639|consen  416 LAHGEVVCAVTISNPTRHVYTGGKGCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGE---ASTLSIW  492 (705)
T ss_pred             hccCcEEEEEEecCCcceeEecCCCeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccc---cceeeee
Confidence            36889999999999999999999999999999876555555555443  457899999999999988886   7899999


Q ss_pred             ecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceee
Q psy14511        111 NSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERIL  190 (488)
Q Consensus       111 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (488)
                      |+......-                                                                       
T Consensus       493 DLAapTpri-----------------------------------------------------------------------  501 (705)
T KOG0639|consen  493 DLAAPTPRI-----------------------------------------------------------------------  501 (705)
T ss_pred             eccCCCcch-----------------------------------------------------------------------
Confidence            986543210                                                                       


Q ss_pred             cCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEE
Q psy14511        191 EAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWH  270 (488)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d  270 (488)
                                                                ..++.. ....+.+++.+||.+..+++ ..||.|.|||
T Consensus       502 ------------------------------------------kaelts-sapaCyALa~spDakvcFsc-csdGnI~vwD  537 (705)
T KOG0639|consen  502 ------------------------------------------KAELTS-SAPACYALAISPDAKVCFSC-CSDGNIAVWD  537 (705)
T ss_pred             ------------------------------------------hhhcCC-cchhhhhhhcCCccceeeee-ccCCcEEEEE
Confidence                                                      001111 23457789999999888888 9999999999


Q ss_pred             CCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEec-Ce
Q psy14511        271 EQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN-NT  347 (488)
Q Consensus       271 ~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d-~~  347 (488)
                      +.....++.+++|...+.||..  +|..|.+|+.|++++.||++++.++.+  ....+.|.++..+|++.+|+.|.. +.
T Consensus       538 Lhnq~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrqlqq--hdF~SQIfSLg~cP~~dWlavGMens~  615 (705)
T KOG0639|consen  538 LHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQ--HDFSSQIFSLGYCPTGDWLAVGMENSN  615 (705)
T ss_pred             cccceeeecccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhhhh--hhhhhhheecccCCCccceeeecccCc
Confidence            9999999999999999999999  699999999999999999998754332  233567999999999999999995 99


Q ss_pred             EEEEECCCCCCCcccc----eeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEE
Q psy14511        348 VKIWDFRQLDAKRPLG----LIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAA  423 (488)
Q Consensus       348 i~iwd~~~~~~~~~~~----~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~  423 (488)
                      +.+......+.-+.-.    .+...|.+-|+++++  -+.|+-+..|...-|..+...+ ..++|.++..|.|+++++||
T Consensus       616 vevlh~skp~kyqlhlheScVLSlKFa~cGkwfvS--tGkDnlLnawrtPyGasiFqsk-E~SsVlsCDIS~ddkyIVTG  692 (705)
T KOG0639|consen  616 VEVLHTSKPEKYQLHLHESCVLSLKFAYCGKWFVS--TGKDNLLNAWRTPYGASIFQSK-ESSSVLSCDISFDDKYIVTG  692 (705)
T ss_pred             EEEEecCCccceeecccccEEEEEEecccCceeee--cCchhhhhhccCccccceeecc-ccCcceeeeeccCceEEEec
Confidence            9998887654322211    112399999999999  5889999999998888777766 45679999999999999999


Q ss_pred             eCCCcEEEEec
Q psy14511        424 SADETISIWNC  434 (488)
Q Consensus       424 ~~dg~v~iw~~  434 (488)
                      |.|....+|.+
T Consensus       693 SGdkkATVYeV  703 (705)
T KOG0639|consen  693 SGDKKATVYEV  703 (705)
T ss_pred             CCCcceEEEEE
Confidence            99998888875

>KOG2048|consensus

Probab=99.95  E-value=2.5e-24  Score=189.89  Aligned_cols=381  Identities=14%  Similarity=0.176  Sum_probs=268.2

Q ss_pred             Ccc-CCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccc
Q psy14511          1 MCW-NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQC   78 (488)
Q Consensus         1 ~~~-dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~   78 (488)
                      ++| +|..|.+.+.+|+|.-||+.+.+++ ..+....+.|++++.+|.+..++.|+ ||.+...+...+. ......+.-
T Consensus        75 L~W~e~~RLFS~g~sg~i~EwDl~~lk~~-~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~-I~~~r~l~r  152 (691)
T KOG2048|consen   75 LAWAEGGRLFSSGLSGSITEWDLHTLKQK-YNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDK-ITYKRSLMR  152 (691)
T ss_pred             EEEccCCeEEeecCCceEEEEecccCcee-EEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCce-EEEEeeccc
Confidence            467 5888888899999999999999855 55778888999999999999999997 8977777765432 222222344


Q ss_pred             cccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccce
Q psy14511         79 HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKV  158 (488)
Q Consensus        79 h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (488)
                      .++.|.+++|.|++..++..+.   ||.|++||..++..+...........          .              ..  
T Consensus       153 q~sRvLslsw~~~~~~i~~Gs~---Dg~Iriwd~~~~~t~~~~~~~~d~l~----------k--------------~~--  203 (691)
T KOG2048|consen  153 QKSRVLSLSWNPTGTKIAGGSI---DGVIRIWDVKSGQTLHIITMQLDRLS----------K--------------RE--  203 (691)
T ss_pred             ccceEEEEEecCCccEEEeccc---CceEEEEEcCCCceEEEeeecccccc----------c--------------CC--
Confidence            5689999999999977766665   99999999998887653222100000          0              00  


Q ss_pred             eccccccccceeeecccccccccccCCCceeecCCCccccceeee-eeeCCCcEEEEECCCeEEEEECCCCceEEEEecC
Q psy14511        159 LNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSG-LDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYP  237 (488)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~  237 (488)
                                                             ...+-+ +...++.++++-..|.|.+||...+...+.+.. 
T Consensus       204 ---------------------------------------~~iVWSv~~Lrd~tI~sgDS~G~V~FWd~~~gTLiqS~~~-  243 (691)
T KOG2048|consen  204 ---------------------------------------PTIVWSVLFLRDSTIASGDSAGTVTFWDSIFGTLIQSHSC-  243 (691)
T ss_pred             ---------------------------------------ceEEEEEEEeecCcEEEecCCceEEEEcccCcchhhhhhh-
Confidence                                                   000111 112456777888999999999999988777776 


Q ss_pred             CCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCccee----eeeeccccccEEEEEecCCEEEEeecCCeEEEEECcC
Q psy14511        238 TYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERL----IQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRT  313 (488)
Q Consensus       238 ~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~----~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~  313 (488)
                        |...|.+++..+++.+++++ +.|+.|.-|...+.+.    ......|...+.+++.-+..+++|+.|..+.+-..+.
T Consensus       244 --h~adVl~Lav~~~~d~vfsa-Gvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~~~~l~sgG~d~~l~i~~s~~  320 (691)
T KOG2048|consen  244 --HDADVLALAVADNEDRVFSA-GVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVIENALISGGRDFTLAICSSRE  320 (691)
T ss_pred             --hhcceeEEEEcCCCCeEEEc-cCCCceEEEEecCCccceeeeccccCCcccceeeeeecceEEecceeeEEEEccccc
Confidence              88999999999999999999 9999999888766533    2234568888999988666888888888776654332


Q ss_pred             CC--------------------------------------------------ccceeeecCCccEEEEEEccCCcEEEEE
Q psy14511        314 HS--------------------------------------------------DYPTAITREGDVVCGLKWSPNGRYLASG  343 (488)
Q Consensus       314 ~~--------------------------------------------------~~~~~~~~~~~~i~~~~~s~~~~~l~~~  343 (488)
                      .+                                                  ...+........|.+.+.||+|++++.+
T Consensus       321 ~~~~~h~~~~~~p~~~~v~~a~~~~L~~~w~~h~v~lwrlGS~~~~g~~~~~~Llkl~~k~~~nIs~~aiSPdg~~Ia~s  400 (691)
T KOG2048|consen  321 FKNMDHRQKNLFPASDRVSVAPENRLLVLWKAHGVDLWRLGSVILQGEYNYIHLLKLFTKEKENISCAAISPDGNLIAIS  400 (691)
T ss_pred             cCchhhhccccccccceeecCccceEEEEeccccccceeccCcccccccChhhheeeecCCccceeeeccCCCCCEEEEe
Confidence            00                                                  0111112223458889999999999988


Q ss_pred             ecCeEEEEECCCCCCCccc----------------------------------cee---------------------ee-
Q psy14511        344 SNNTVKIWDFRQLDAKRPL----------------------------------GLI---------------------VP-  367 (488)
Q Consensus       344 ~d~~i~iwd~~~~~~~~~~----------------------------------~~~---------------------~~-  367 (488)
                      .-...+||.+.........                                  ..+                     ++ 
T Consensus       401 t~~~~~iy~L~~~~~vk~~~v~~~~~~~~~a~~i~ftid~~k~~~~s~~~~~le~~el~~ps~kel~~~~~~~~~~~I~~  480 (691)
T KOG2048|consen  401 TVSRTKIYRLQPDPNVKVINVDDVPLALLDASAISFTIDKNKLFLVSKNIFSLEEFELETPSFKELKSIQSQAKCPSISR  480 (691)
T ss_pred             eccceEEEEeccCcceeEEEeccchhhhccceeeEEEecCceEEEEecccceeEEEEecCcchhhhhccccccCCCccee
Confidence            8666666666541100000                                  000                     11 


Q ss_pred             -eecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcC-CCCEEEEEeCCCcEEEEecCCCCcc-----
Q psy14511        368 -KLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSP-DQTCVAAASADETISIWNCFPRDKK-----  440 (488)
Q Consensus       368 -~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~t~~~dg~v~iw~~~~~~~~-----  440 (488)
                       ..+++|++++++  +..|.|.+|++++.+.......-...|+.++++| +.+.|+.+..|+.+.-+|++..+..     
T Consensus       481 l~~SsdG~yiaa~--~t~g~I~v~nl~~~~~~~l~~rln~~vTa~~~~~~~~~~lvvats~nQv~efdi~~~~l~~ws~~  558 (691)
T KOG2048|consen  481 LVVSSDGNYIAAI--STRGQIFVYNLETLESHLLKVRLNIDVTAAAFSPFVRNRLVVATSNNQVFEFDIEARNLTRWSKN  558 (691)
T ss_pred             EEEcCCCCEEEEE--eccceEEEEEcccceeecchhccCcceeeeeccccccCcEEEEecCCeEEEEecchhhhhhhhhc
Confidence             778999999995  5799999999998876544434557899999995 6678999999999999999533321     


Q ss_pred             -------ccccccCCcceEEeecC
Q psy14511        441 -------RKARQVGSGSSLEFAIL  457 (488)
Q Consensus       441 -------~~~~~~~~v~~~~~s~~  457 (488)
                             ........+..+.|.|.
T Consensus       559 nt~nlpk~~~~l~~~~~gisfd~~  582 (691)
T KOG2048|consen  559 NTRNLPKEPKTLIPGIPGISFDPK  582 (691)
T ss_pred             cccccccChhhcCCCCceEEeCCC
Confidence                   22334455666666653

>KOG0772|consensus

Probab=99.95  E-value=8.2e-27  Score=198.92  Aligned_cols=276  Identities=16%  Similarity=0.262  Sum_probs=204.8

Q ss_pred             cCCceEEEeecCCeEEEEEcccCc----ccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCc--------
Q psy14511          3 WNGNLLSCGTIGGNILHYDVRTHS----DYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDA--------   69 (488)
Q Consensus         3 ~dg~~la~g~~dg~i~iwd~~~~~----~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~--------   69 (488)
                      ..|-.|++|+.|.+|+.||.....    ....+.......|.+++||+.|..|++.+ ....+|+|-...+.        
T Consensus       177 p~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqakl~DRdG~~~~e~~KGDQ  256 (641)
T KOG0772|consen  177 PSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQAKLLDRDGFEIVEFSKGDQ  256 (641)
T ss_pred             CCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCcceeEEccCCceeeeeeccch
Confidence            478999999999999999987532    12222334445799999999988777766 88999999764322        


Q ss_pred             -CCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEE
Q psy14511         70 -KRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLL  148 (488)
Q Consensus        70 -~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (488)
                       .+-+...+||...++|.+|+|+.+..+.+++  +|+++++||+.+.+......                          
T Consensus       257 YI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s--~DgtlRiWdv~~~k~q~qVi--------------------------  308 (641)
T KOG0772|consen  257 YIRDMYNTKGHIAELTCGCWHPDNKEEFLTCS--YDGTLRIWDVNNTKSQLQVI--------------------------  308 (641)
T ss_pred             hhhhhhccCCceeeeeccccccCcccceEEec--CCCcEEEEecCCchhheeEE--------------------------
Confidence             1222335789999999999999887776666  39999999997654211110                          


Q ss_pred             eeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCC
Q psy14511        149 HGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTN  228 (488)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~  228 (488)
                                                                                                      
T Consensus       309 --------------------------------------------------------------------------------  308 (641)
T KOG0772|consen  309 --------------------------------------------------------------------------------  308 (641)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcce---eeeeeccccc--cEEEEEe--cCCEEEEee
Q psy14511        229 KTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEER---LIQKLRTHMH--QVIAMCW--NGNLLSCGT  301 (488)
Q Consensus       229 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~---~~~~~~~~~~--~v~~~~~--~~~~l~~~~  301 (488)
                         ......+ ..-+++.++|+++++.|+++ ..||.|.+|+.....   ....-.+|..  .|+++.|  +|++|++-+
T Consensus       309 ---k~k~~~g-~Rv~~tsC~~nrdg~~iAag-c~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg  383 (641)
T KOG0772|consen  309 ---KTKPAGG-KRVPVTSCAWNRDGKLIAAG-CLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRG  383 (641)
T ss_pred             ---eeccCCC-cccCceeeecCCCcchhhhc-ccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhcc
Confidence               0001111 55678999999999999988 999999999975432   1223356766  8999999  899999999


Q ss_pred             cCCeEEEEECcCCCccceeeecCC--ccEEEEEEccCCcEEEEEec-------CeEEEEECCCCCCCccccee-----ee
Q psy14511        302 IGGNILHYDVRTHSDYPTAITREG--DVVCGLKWSPNGRYLASGSN-------NTVKIWDFRQLDAKRPLGLI-----VP  367 (488)
Q Consensus       302 ~dg~i~i~d~~~~~~~~~~~~~~~--~~i~~~~~s~~~~~l~~~~d-------~~i~iwd~~~~~~~~~~~~~-----~~  367 (488)
                      .|+.+++||+++.++++....+-.  -+-+.++|||+.++|++|..       +.+.+||..+.+....+...     .+
T Consensus       384 ~D~tLKvWDLrq~kkpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~~aSvv~~  463 (641)
T KOG0772|consen  384 FDDTLKVWDLRQFKKPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDISTASVVRC  463 (641)
T ss_pred             CCCceeeeeccccccchhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEecCCCceEEEE
Confidence            999999999999877766655433  23467899999999999851       77999999887655544322     23


Q ss_pred             eecCCCCEEEEEccCCCCeEEEEeCC
Q psy14511        368 KLKREGRELVTSHGKQDCSLKMWEYP  393 (488)
Q Consensus       368 ~~~~~~~~l~~~~g~~~~~i~i~d~~  393 (488)
                      .|+|.-+.+.+  |+.||.+++|--+
T Consensus       464 ~WhpkLNQi~~--gsgdG~~~vyYdp  487 (641)
T KOG0772|consen  464 LWHPKLNQIFA--GSGDGTAHVYYDP  487 (641)
T ss_pred             eecchhhheee--ecCCCceEEEECc
Confidence            99999999988  7889999987543

>KOG1445|consensus

Probab=99.95  E-value=1.9e-25  Score=195.62  Aligned_cols=165  Identities=18%  Similarity=0.333  Sum_probs=124.5

Q ss_pred             ecCCeEEEEECcCCCccceee---ecCCccEEEEEEcc-CCcEEEEEec-CeEEEEECCCCCCCccccee----------
Q psy14511        301 TIGGNILHYDVRTHSDYPTAI---TREGDVVCGLKWSP-NGRYLASGSN-NTVKIWDFRQLDAKRPLGLI----------  365 (488)
Q Consensus       301 ~~dg~i~i~d~~~~~~~~~~~---~~~~~~i~~~~~s~-~~~~l~~~~d-~~i~iwd~~~~~~~~~~~~~----------  365 (488)
                      +..|.|-||+++.........   ......|+.+.|.| |.+.||+++| |.|++|.+............          
T Consensus       600 g~gG~iai~el~~PGrLPDgv~p~l~Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eK  679 (1012)
T KOG1445|consen  600 GSGGVIAIYELNEPGRLPDGVMPGLFNGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEK  679 (1012)
T ss_pred             CCCceEEEEEcCCCCCCCcccccccccCceeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccce
Confidence            445677778777655332211   11234588999999 6688998885 99999999876554433222          


Q ss_pred             --eeeecCCC-CEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcccc
Q psy14511        366 --VPKLKREG-RELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRK  442 (488)
Q Consensus       366 --~~~~~~~~-~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~  442 (488)
                        ...|+|-. ..|++  ++.|.+|++||+.+++....+.+|.+.|.+++|||||+.+||.+.||+|++|+..+++....
T Consensus       680 I~slRfHPLAadvLa~--asyd~Ti~lWDl~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~pv~  757 (1012)
T KOG1445|consen  680 ITSLRFHPLAADVLAV--ASYDSTIELWDLANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSREQPVY  757 (1012)
T ss_pred             EEEEEecchhhhHhhh--hhccceeeeeehhhhhhhheeccCcCceeEEEECCCCcceeeeecCceEEEeCCCCCCCccc
Confidence              11677754 34445  68899999999999999999999999999999999999999999999999999988765522


Q ss_pred             ---ccccCCcceEEeecCCCceEEEEee
Q psy14511        443 ---ARQVGSGSSLEFAILKQPVSLTALL  467 (488)
Q Consensus       443 ---~~~~~~v~~~~~s~~~~~~~~~~~~  467 (488)
                         .........+.|..+|+.+.+.++-
T Consensus       758 Eg~gpvgtRgARi~wacdgr~viv~Gfd  785 (1012)
T KOG1445|consen  758 EGKGPVGTRGARILWACDGRIVIVVGFD  785 (1012)
T ss_pred             cCCCCccCcceeEEEEecCcEEEEeccc
Confidence               1223455678899999999888764

>KOG1332|consensus

Probab=99.95  E-value=1.9e-26  Score=178.17  Aligned_cols=235  Identities=23%  Similarity=0.403  Sum_probs=181.4

Q ss_pred             cCCceEEEeecCCeEEEEEcccCcc--cceeecccCceEEEEEEcc--CCcEEEEec-CCeEEEEeccccCcCCCccccc
Q psy14511          3 WNGNLLSCGTIGGNILHYDVRTHSD--YPTAITREGDVVCGLKWSP--NGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQ   77 (488)
Q Consensus         3 ~dg~~la~g~~dg~i~iwd~~~~~~--~~~~~~~h~~~V~~l~~sp--~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~   77 (488)
                      .-|+.||++++|++|+|+.+....+  +...|.||.++|.-++|..  .|.+||+++ ||.|.||.-+.+ .........
T Consensus        21 yygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g-~w~k~~e~~   99 (299)
T KOG1332|consen   21 YYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENG-RWTKAYEHA   99 (299)
T ss_pred             hhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCC-chhhhhhhh
Confidence            4589999999999999999987663  4567899999999999976  899999999 999999998876 455666778


Q ss_pred             ccccceeEEEEecCCC-eEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeecccc
Q psy14511         78 CHLSAVKAIAWCPWEP-TLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRK  156 (488)
Q Consensus        78 ~h~~~v~~l~~~~~~~-~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (488)
                      .|...|++++|.|.+- .+|++++.  ||.|.|.+.++...-                                      
T Consensus       100 ~h~~SVNsV~wapheygl~LacasS--DG~vsvl~~~~~g~w--------------------------------------  139 (299)
T KOG1332|consen  100 AHSASVNSVAWAPHEYGLLLACASS--DGKVSVLTYDSSGGW--------------------------------------  139 (299)
T ss_pred             hhcccceeecccccccceEEEEeeC--CCcEEEEEEcCCCCc--------------------------------------
Confidence            8999999999999643 34455543  999999987643100                                      


Q ss_pred             ceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEec
Q psy14511        157 KVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEY  236 (488)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~  236 (488)
                                                                                         +.     ..+.. 
T Consensus       140 -------------------------------------------------------------------~t-----~ki~~-  146 (299)
T KOG1332|consen  140 -------------------------------------------------------------------TT-----SKIVF-  146 (299)
T ss_pred             -------------------------------------------------------------------cc-----hhhhh-
Confidence                                                                               00     00000 


Q ss_pred             CCCCCCceEEEEEcCC---C-----------CeEEEEeCCCCcEEEEECCcce--eeeeeccccccEEEEEec------C
Q psy14511        237 PTYDNAYISCVAWKPR---T-----------TDLAVTNTCTEYIDLWHEQEER--LIQKLRTHMHQVIAMCWN------G  294 (488)
Q Consensus       237 ~~~~~~~i~~~~~~~~---~-----------~~l~~~~~~~~~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~------~  294 (488)
                        .|...+++++|.|.   |           +.|+++ +.|..|+||+...++  .-.++++|..-|..++|.      .
T Consensus       147 --aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSg-GcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~  223 (299)
T KOG1332|consen  147 --AHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSG-GCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPK  223 (299)
T ss_pred             --ccccccceeeecCcCCCccccccCcccccceeecc-CCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCc
Confidence              05556667776664   3           468888 999999999988753  345588999999999992      3


Q ss_pred             CEEEEeecCCeEEEEECcCCCc--cceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECC
Q psy14511        295 NLLSCGTIGGNILHYDVRTHSD--YPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFR  354 (488)
Q Consensus       295 ~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~  354 (488)
                      ..|++++.||++.||..+....  ....+......++++.||+.|..|++++ |+.+.+|.-.
T Consensus       224 s~iAS~SqDg~viIwt~~~e~e~wk~tll~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~  286 (299)
T KOG1332|consen  224 STIASCSQDGTVIIWTKDEEYEPWKKTLLEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWKEN  286 (299)
T ss_pred             eeeEEecCCCcEEEEEecCccCcccccccccCCcceEEEEEeccccEEEEecCCcEEEEEEeC
Confidence            6899999999999998874322  2334555678899999999999999888 6999999744

>KOG0301|consensus

Probab=99.95  E-value=1.6e-25  Score=197.94  Aligned_cols=280  Identities=14%  Similarity=0.220  Sum_probs=219.8

Q ss_pred             cceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeE-EEEecCCCeEEeeeCCcccc
Q psy14511         28 YPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKA-IAWCPWEPTLLATGGGICDQ  105 (488)
Q Consensus        28 ~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~-l~~~~~~~~l~~~~~~~~d~  105 (488)
                      +...+.+|...|..+++.++. .+++++ |+++++|+-...+ ......+.+|.+-|.. +++.+..+..++.|+.  |.
T Consensus         6 ls~~l~gH~~DVr~v~~~~~~-~i~s~sRd~t~~vw~~~~~~-~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~--D~   81 (745)
T KOG0301|consen    6 LSHELEGHKSDVRAVAVTDGV-CIISGSRDGTVKVWAKKGKQ-YLETHAFEGPKGFIANSICYAESDKGRLVVGGM--DT   81 (745)
T ss_pred             eEEEeccCccchheeEecCCe-EEeecCCCCceeeeeccCcc-cccceecccCcceeeccceeccccCcceEeecc--cc
Confidence            456788999999999987655 677777 9999999976433 3334456777777776 8887644443444443  99


Q ss_pred             eEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCC
Q psy14511        106 TVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAK  185 (488)
Q Consensus       106 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (488)
                      ++.+|.+.+..+...+++|...+++....                                                   
T Consensus        82 ~i~v~~~~~~~P~~~LkgH~snVC~ls~~---------------------------------------------------  110 (745)
T KOG0301|consen   82 TIIVFKLSQAEPLYTLKGHKSNVCSLSIG---------------------------------------------------  110 (745)
T ss_pred             eEEEEecCCCCchhhhhccccceeeeecC---------------------------------------------------
Confidence            99999999999999999986655443321                                                   


Q ss_pred             CceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCc
Q psy14511        186 PERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEY  265 (488)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~  265 (488)
                                           ....+++++.|.++++|....-..    .+++ |...|.+++.-|++ .++++ +.|.+
T Consensus       111 ---------------------~~~~~iSgSWD~TakvW~~~~l~~----~l~g-H~asVWAv~~l~e~-~~vTg-saDKt  162 (745)
T KOG0301|consen  111 ---------------------EDGTLISGSWDSTAKVWRIGELVY----SLQG-HTASVWAVASLPEN-TYVTG-SADKT  162 (745)
T ss_pred             ---------------------CcCceEecccccceEEecchhhhc----ccCC-cchheeeeeecCCC-cEEec-cCcce
Confidence                                 123478899999999998654322    2555 99999999999988 67777 99999


Q ss_pred             EEEEECCcceeeeeeccccccEEEEEe-cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe
Q psy14511        266 IDLWHEQEERLIQKLRTHMHQVIAMCW-NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS  344 (488)
Q Consensus       266 i~i~d~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~  344 (488)
                      |++|.-  ++.++++.+|...|..+++ ++..+++++.||.|++|++..  ..+....+|..-+++++..+++..+++++
T Consensus       163 IklWk~--~~~l~tf~gHtD~VRgL~vl~~~~flScsNDg~Ir~w~~~g--e~l~~~~ghtn~vYsis~~~~~~~Ivs~g  238 (745)
T KOG0301|consen  163 IKLWKG--GTLLKTFSGHTDCVRGLAVLDDSHFLSCSNDGSIRLWDLDG--EVLLEMHGHTNFVYSISMALSDGLIVSTG  238 (745)
T ss_pred             eeeccC--CchhhhhccchhheeeeEEecCCCeEeecCCceEEEEeccC--ceeeeeeccceEEEEEEecCCCCeEEEec
Confidence            999975  6789999999999999999 888999999999999999943  57888999999999999777888888886


Q ss_pred             -cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEE
Q psy14511        345 -NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAA  423 (488)
Q Consensus       345 -d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~  423 (488)
                       |++++||+..                                         ++.+.+.-....|+++.+-++|. +++|
T Consensus       239 EDrtlriW~~~-----------------------------------------e~~q~I~lPttsiWsa~~L~NgD-Ivvg  276 (745)
T KOG0301|consen  239 EDRTLRIWKKD-----------------------------------------ECVQVITLPTTSIWSAKVLLNGD-IVVG  276 (745)
T ss_pred             CCceEEEeecC-----------------------------------------ceEEEEecCccceEEEEEeeCCC-EEEe
Confidence             4666666532                                         45666665566899999988886 5678


Q ss_pred             eCCCcEEEEecCC
Q psy14511        424 SADETISIWNCFP  436 (488)
Q Consensus       424 ~~dg~v~iw~~~~  436 (488)
                      +.||.||||....
T Consensus       277 ~SDG~VrVfT~~k  289 (745)
T KOG0301|consen  277 GSDGRVRVFTVDK  289 (745)
T ss_pred             ccCceEEEEEecc
Confidence            8899999999874

>KOG0274|consensus

Probab=99.95  E-value=1.1e-25  Score=206.26  Aligned_cols=246  Identities=20%  Similarity=0.263  Sum_probs=210.3

Q ss_pred             eeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeee
Q psy14511        200 YTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQK  279 (488)
Q Consensus       200 ~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~  279 (488)
                      .+....+.++.+++++.++.|.+|+..++..... .+.+ |.+.+.++++...+..++++ +.|.++++||..++++...
T Consensus       210 ~~~~~q~~~~~~~~~s~~~tl~~~~~~~~~~i~~-~l~G-H~g~V~~l~~~~~~~~lvsg-S~D~t~rvWd~~sg~C~~~  286 (537)
T KOG0274|consen  210 VVLCLQLHDGFFKSGSDDSTLHLWDLNNGYLILT-RLVG-HFGGVWGLAFPSGGDKLVSG-STDKTERVWDCSTGECTHS  286 (537)
T ss_pred             hhhhheeecCeEEecCCCceeEEeecccceEEEe-eccC-CCCCceeEEEecCCCEEEEE-ecCCcEEeEecCCCcEEEE
Confidence            3444556678889999999999999998876554 2445 99999999998877788888 9999999999999999999


Q ss_pred             eccccccEEEEEecCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCC
Q psy14511        280 LRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDA  358 (488)
Q Consensus       280 ~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~  358 (488)
                      +.+|...+.++...+..+++|+.|.+|++|+++++ ..+..+.+|..+|+++..+  +.++++|+ |+.|++||+.+++.
T Consensus       287 l~gh~stv~~~~~~~~~~~sgs~D~tVkVW~v~n~-~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~c  363 (537)
T KOG0274|consen  287 LQGHTSSVRCLTIDPFLLVSGSRDNTVKVWDVTNG-ACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGKC  363 (537)
T ss_pred             ecCCCceEEEEEccCceEeeccCCceEEEEeccCc-ceEEEeccccccEEEEEec--CCEEEEEecCceEEEEEhhhcee
Confidence            99999999999999999999999999999999986 5777888899999999997  77888888 79999999998877


Q ss_pred             Ccccceeee---eecCCC-CEEEEEccCCCCeEEEEeCCCc-ceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEe
Q psy14511        359 KRPLGLIVP---KLKREG-RELVTSHGKQDCSLKMWEYPRL-HLIEELKIHQERILSAVLSPDQTCVAAASADETISIWN  433 (488)
Q Consensus       359 ~~~~~~~~~---~~~~~~-~~l~~~~g~~~~~i~i~d~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~  433 (488)
                      ...+..+..   ++..++ ..++.  |+.|++|++||+.+. +++.++.+|.+-+..+.+  .+++|++++.|+.|++||
T Consensus       364 l~sl~gH~~~V~sl~~~~~~~~~S--gs~D~~IkvWdl~~~~~c~~tl~~h~~~v~~l~~--~~~~Lvs~~aD~~Ik~WD  439 (537)
T KOG0274|consen  364 LKSLSGHTGRVYSLIVDSENRLLS--GSLDTTIKVWDLRTKRKCIHTLQGHTSLVSSLLL--RDNFLVSSSADGTIKLWD  439 (537)
T ss_pred             eeeecCCcceEEEEEecCcceEEe--eeeccceEeecCCchhhhhhhhcCCccccccccc--ccceeEeccccccEEEee
Confidence            666655433   555666 77777  899999999999999 999999999998876665  678999999999999999


Q ss_pred             cCCCCcccccc--ccCCcceEEee
Q psy14511        434 CFPRDKKRKAR--QVGSGSSLEFA  455 (488)
Q Consensus       434 ~~~~~~~~~~~--~~~~v~~~~~s  455 (488)
                      ..+++.+....  +.+.+..+++.
T Consensus       440 ~~~~~~~~~~~~~~~~~v~~l~~~  463 (537)
T KOG0274|consen  440 AEEGECLRTLEGRHVGGVSALALG  463 (537)
T ss_pred             cccCceeeeeccCCcccEEEeecC
Confidence            99999885433  45777777775

>KOG1274|consensus

Probab=99.95  E-value=4.1e-25  Score=201.49  Aligned_cols=223  Identities=15%  Similarity=0.226  Sum_probs=182.4

Q ss_pred             CCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccc
Q psy14511        241 NAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYP  318 (488)
Q Consensus       241 ~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~  318 (488)
                      ...|.+++.  ++.+++++ +.+++|.+|.+..++.-..+....-++.++++  +|++++.|+.|-.|++-++... ...
T Consensus        56 g~~v~~ia~--~s~~f~~~-s~~~tv~~y~fps~~~~~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~-s~~  131 (933)
T KOG1274|consen   56 GELVSSIAC--YSNHFLTG-SEQNTVLRYKFPSGEEDTILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDS-SQE  131 (933)
T ss_pred             CceeEEEee--cccceEEe-eccceEEEeeCCCCCccceeeeeeccceEEEEecCCcEEEeecCceeEEEEecccc-chh
Confidence            345666665  34588888 99999999999887766566666677888888  6789999999999999999875 477


Q ss_pred             eeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCccccee-------------eeeecCCCCEEEEEccCCC
Q psy14511        319 TAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLI-------------VPKLKREGRELVTSHGKQD  384 (488)
Q Consensus       319 ~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~-------------~~~~~~~~~~l~~~~g~~~  384 (488)
                      ..+.+|..+|.++.|+|.+++||+.+ ||.+++||+.++.....+...             ..+|+|+|..+++  -..|
T Consensus       132 ~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~--~~~d  209 (933)
T KOG1274|consen  132 KVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAV--PPVD  209 (933)
T ss_pred             eeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEe--eccC
Confidence            88999999999999999999999998 899999999987655444322             1299999777777  4779


Q ss_pred             CeEEEEeCCCcceeEEEee--ccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccccccccCCcceEEeecCCCceE
Q psy14511        385 CSLKMWEYPRLHLIEELKI--HQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKARQVGSGSSLEFAILKQPVS  462 (488)
Q Consensus       385 ~~i~i~d~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~  462 (488)
                      +.|++|+..+++....++.  +...+..++|+|+|+|||+++.||.|.|||+++.+.   ......|.+++|.|+...++
T Consensus       210 ~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv~t~~~---~~~~~~Vc~~aw~p~~n~it  286 (933)
T KOG1274|consen  210 NTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLDGQILVWNVDTHER---HEFKRAVCCEAWKPNANAIT  286 (933)
T ss_pred             CeEEEEccCCceeheeecccccccceEEEEEcCCCcEEeeeccCCcEEEEecccchh---ccccceeEEEecCCCCCeeE
Confidence            9999999999988887764  344599999999999999999999999999998433   34567799999999999988


Q ss_pred             EEEeeecccc
Q psy14511        463 LTALLRSRAV  472 (488)
Q Consensus       463 ~~~~~~~~~~  472 (488)
                      +.........
T Consensus       287 ~~~~~g~~~~  296 (933)
T KOG1274|consen  287 LITALGTLGV  296 (933)
T ss_pred             EEeecccccc
Confidence            8765544443

>KOG0308|consensus

Probab=99.95  E-value=2.7e-26  Score=201.20  Aligned_cols=247  Identities=21%  Similarity=0.298  Sum_probs=193.0

Q ss_pred             ccCceEE---EEEEc-cCCcEEEEec-CCeEEEEeccccCc---CCCcccccccccceeEEEEecCCCeEEeeeCCcccc
Q psy14511         34 REGDVVC---GLKWS-PNGRYLASGS-NNTVKIWDFRQLDA---KRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQ  105 (488)
Q Consensus        34 ~h~~~V~---~l~~s-p~g~~las~~-d~~i~vwd~~~~~~---~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~  105 (488)
                      .|...|.   .+..+ |.++||.+|+ ||.|++|++.....   ...+..++.|...|.++....+++.++++++   |-
T Consensus        19 qn~~~v~~~~~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~Ss---Dt   95 (735)
T KOG0308|consen   19 QNRNGVNITKALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASS---DT   95 (735)
T ss_pred             hccccccchhhccccCCCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecC---Cc
Confidence            3444555   45555 4678899999 99999999865332   2246678889999999999999999999888   99


Q ss_pred             eEEEEecCCC--eeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeeccccccccccc
Q psy14511        106 TVRLWNSMNG--KEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVK  183 (488)
Q Consensus       106 ~i~vwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (488)
                      +|++|+...+  -+...+..|..-+.+++..                                                 
T Consensus        96 TVK~W~~~~~~~~c~stir~H~DYVkcla~~-------------------------------------------------  126 (735)
T KOG0308|consen   96 TVKVWNAHKDNTFCMSTIRTHKDYVKCLAYI-------------------------------------------------  126 (735)
T ss_pred             eEEEeecccCcchhHhhhhcccchheeeeec-------------------------------------------------
Confidence            9999998776  3444554443322222210                                                 


Q ss_pred             CCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCce--------EEEEecC-CCCCCceEEEEEcCCCC
Q psy14511        184 AKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKT--------QLLVEYP-TYDNAYISCVAWKPRTT  254 (488)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~--------~~~~~~~-~~~~~~i~~~~~~~~~~  254 (488)
                                           ......+++++.|+.|.+||++++..        ...-.+. + +...|++++.++.|.
T Consensus       127 ---------------------ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG-~k~siYSLA~N~t~t  184 (735)
T KOG0308|consen  127 ---------------------AKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSG-PKDSIYSLAMNQTGT  184 (735)
T ss_pred             ---------------------ccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCC-CccceeeeecCCcce
Confidence                                 00124566677999999999998732        1122223 4 788999999999997


Q ss_pred             eEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEE
Q psy14511        255 DLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLK  332 (488)
Q Consensus       255 ~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~  332 (488)
                      .++.| +..+.+++||.++.+.+..+++|...|.++..  ||+.+++++.||+|++||+... +++..+..|...|+++.
T Consensus       185 ~ivsG-gtek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQ-rCl~T~~vH~e~VWaL~  262 (735)
T KOG0308|consen  185 IIVSG-GTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQ-RCLATYIVHKEGVWALQ  262 (735)
T ss_pred             EEEec-CcccceEEeccccccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeecccc-ceeeeEEeccCceEEEe
Confidence            67666 99999999999999999999999999999998  7999999999999999999984 68888999999999999


Q ss_pred             EccCCcEEEEEe-cCeEEEEECCCC
Q psy14511        333 WSPNGRYLASGS-NNTVKIWDFRQL  356 (488)
Q Consensus       333 ~s~~~~~l~~~~-d~~i~iwd~~~~  356 (488)
                      .+|+=.++++|+ |+.|..=|+++.
T Consensus       263 ~~~sf~~vYsG~rd~~i~~Tdl~n~  287 (735)
T KOG0308|consen  263 SSPSFTHVYSGGRDGNIYRTDLRNP  287 (735)
T ss_pred             eCCCcceEEecCCCCcEEecccCCc
Confidence            999999999888 587777777653

>KOG1332|consensus

Probab=99.95  E-value=3.7e-26  Score=176.55  Aligned_cols=252  Identities=22%  Similarity=0.344  Sum_probs=195.0

Q ss_pred             eeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEec--CCCeEEeeeCCcccce
Q psy14511         30 TAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCP--WEPTLLATGGGICDQT  106 (488)
Q Consensus        30 ~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~~~l~~~~~~~~d~~  106 (488)
                      ++...|.+.|..+...--|+.||+++ |++|+|+.++.......+.++.+|.++|+.++|..  .|. ++++++  +||.
T Consensus         5 ~idt~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~-iLAScs--YDgk   81 (299)
T KOG1332|consen    5 TIDTQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGT-ILASCS--YDGK   81 (299)
T ss_pred             ehhhhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCc-EeeEee--cCce
Confidence            44578999999999999999999998 99999999987666578888999999999999965  565 555555  5999


Q ss_pred             EEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCC
Q psy14511        107 VRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKP  186 (488)
Q Consensus       107 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (488)
                      |.||.-.+|+-.+                                                                   
T Consensus        82 VIiWke~~g~w~k-------------------------------------------------------------------   94 (299)
T KOG1332|consen   82 VIIWKEENGRWTK-------------------------------------------------------------------   94 (299)
T ss_pred             EEEEecCCCchhh-------------------------------------------------------------------
Confidence            9999976664210                                                                   


Q ss_pred             ceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCC--CeEEEEeCCCC
Q psy14511        187 ERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRT--TDLAVTNTCTE  264 (488)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~l~~~~~~~~  264 (488)
                                                                    ...... |...+++++|.|.+  -.|+++ +.||
T Consensus        95 ----------------------------------------------~~e~~~-h~~SVNsV~wapheygl~Laca-sSDG  126 (299)
T KOG1332|consen   95 ----------------------------------------------AYEHAA-HSASVNSVAWAPHEYGLLLACA-SSDG  126 (299)
T ss_pred             ----------------------------------------------hhhhhh-hcccceeecccccccceEEEEe-eCCC
Confidence                                                          111111 88899999998864  456666 9999


Q ss_pred             cEEEEECCcc---eeeeeeccccccEEEEEe-----cC-----------CEEEEeecCCeEEEEECcCCC-ccceeeecC
Q psy14511        265 YIDLWHEQEE---RLIQKLRTHMHQVIAMCW-----NG-----------NLLSCGTIGGNILHYDVRTHS-DYPTAITRE  324 (488)
Q Consensus       265 ~i~i~d~~~~---~~~~~~~~~~~~v~~~~~-----~~-----------~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~  324 (488)
                      .|.+.+.+..   ...+....|.-.|++++|     .|           +.|++|+.|..|+||+..++. .....+.+|
T Consensus       127 ~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H  206 (299)
T KOG1332|consen  127 KVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGH  206 (299)
T ss_pred             cEEEEEEcCCCCccchhhhhccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhc
Confidence            9999988764   223445679999999998     22           579999999999999998754 234558999


Q ss_pred             CccEEEEEEccCC----cEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeE
Q psy14511        325 GDVVCGLKWSPNG----RYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIE  399 (488)
Q Consensus       325 ~~~i~~~~~s~~~----~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~  399 (488)
                      .+.|+.++|.|.-    .+||+++ ||++.||-.+...                       +.       |   +.+   
T Consensus       207 ~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~-----------------------e~-------w---k~t---  250 (299)
T KOG1332|consen  207 KDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEY-----------------------EP-------W---KKT---  250 (299)
T ss_pred             chhhhhhhhccccCCCceeeEEecCCCcEEEEEecCcc-----------------------Cc-------c---ccc---
Confidence            9999999999964    5788888 6888888765220                       00       0   111   


Q ss_pred             EEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecC
Q psy14511        400 ELKIHQERILSAVLSPDQTCVAAASADETISIWNCF  435 (488)
Q Consensus       400 ~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~  435 (488)
                      .++.....++.+.||+.|+.|+.++.|+.|.+|.-+
T Consensus       251 ll~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~  286 (299)
T KOG1332|consen  251 LLEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWKEN  286 (299)
T ss_pred             ccccCCcceEEEEEeccccEEEEecCCcEEEEEEeC
Confidence            223356789999999999999999999999999755

>KOG0268|consensus

Probab=99.95  E-value=1.7e-26  Score=188.42  Aligned_cols=264  Identities=15%  Similarity=0.287  Sum_probs=195.5

Q ss_pred             ceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCcccccccccceeE
Q psy14511          6 NLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKA   85 (488)
Q Consensus         6 ~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~   85 (488)
                      ..+|+|+.||.|+|||+.+..++ ..+..|.+.|..|+++. +.++-+|.|.+|+.|.++..    ++.++.+ .+.+..
T Consensus        80 s~~aSGs~DG~VkiWnlsqR~~~-~~f~AH~G~V~Gi~v~~-~~~~tvgdDKtvK~wk~~~~----p~~tilg-~s~~~g  152 (433)
T KOG0268|consen   80 STVASGSCDGEVKIWNLSQRECI-RTFKAHEGLVRGICVTQ-TSFFTVGDDKTVKQWKIDGP----PLHTILG-KSVYLG  152 (433)
T ss_pred             hhhhccccCceEEEEehhhhhhh-heeecccCceeeEEecc-cceEEecCCcceeeeeccCC----cceeeec-cccccc
Confidence            45899999999999999987755 67899999999999997 55555555999999998752    3333322 345666


Q ss_pred             EEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecccccc
Q psy14511         86 IAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRT  165 (488)
Q Consensus        86 l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (488)
                      +.-+..+. ++++++    ..|.|||..-..++..+.-....+.++.+++.                             
T Consensus       153 Idh~~~~~-~FaTcG----e~i~IWD~~R~~Pv~smswG~Dti~svkfNpv-----------------------------  198 (433)
T KOG0268|consen  153 IDHHRKNS-VFATCG----EQIDIWDEQRDNPVSSMSWGADSISSVKFNPV-----------------------------  198 (433)
T ss_pred             cccccccc-cccccC----ceeeecccccCCccceeecCCCceeEEecCCC-----------------------------
Confidence            66655554 445543    27999999877766666554332222222211                             


Q ss_pred             ccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEE-EEECCCeEEEEECCCCceEEEEecCCCCCCce
Q psy14511        166 VSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTL-AVALDTSVYTWNTKTNKTQLLVEYPTYDNAYI  244 (488)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i  244 (488)
                                                                ...++ +++.|+.|.+||++++.+...+.+    ...-
T Consensus       199 ------------------------------------------ETsILas~~sDrsIvLyD~R~~~Pl~KVi~----~mRT  232 (433)
T KOG0268|consen  199 ------------------------------------------ETSILASCASDRSIVLYDLRQASPLKKVIL----TMRT  232 (433)
T ss_pred             ------------------------------------------cchheeeeccCCceEEEecccCCccceeee----eccc
Confidence                                                      12344 445999999999999988777664    3456


Q ss_pred             EEEEEcCCCCeEEEEeCCCCcEEEEECCc-ceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceee
Q psy14511        245 SCVAWKPRTTDLAVTNTCTEYIDLWHEQE-ERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAI  321 (488)
Q Consensus       245 ~~~~~~~~~~~l~~~~~~~~~i~i~d~~~-~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~  321 (488)
                      +.++|+|++-.+.++ +.|..++.||++. ..++....+|...|.+++|  .|+.+++|+.|.+|+||..+.+..--...
T Consensus       233 N~IswnPeafnF~~a-~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~SRdiYh  311 (433)
T KOG0268|consen  233 NTICWNPEAFNFVAA-NEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDIYH  311 (433)
T ss_pred             cceecCccccceeec-cccccceehhhhhhcccchhhcccceeEEEeccCCCcchhccccccceEEEeecCCCcchhhhh
Confidence            789999976666666 9999999999986 3567778899999999999  58999999999999999998754221112


Q ss_pred             ecCCccEEEEEEccCCcEEEEEec-CeEEEEECCCCC
Q psy14511        322 TREGDVVCGLKWSPNGRYLASGSN-NTVKIWDFRQLD  357 (488)
Q Consensus       322 ~~~~~~i~~~~~s~~~~~l~~~~d-~~i~iwd~~~~~  357 (488)
                      ...-..|.++.||.|.+++++|+| +.|++|.....+
T Consensus       312 tkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~Ase  348 (433)
T KOG0268|consen  312 TKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKASE  348 (433)
T ss_pred             HhhhheeeEEEEeccccEEEecCCCcceeeeecchhh
Confidence            222345899999999999999996 999999876543

>KOG0300|consensus

Probab=99.94  E-value=1.5e-25  Score=179.96  Aligned_cols=295  Identities=15%  Similarity=0.212  Sum_probs=201.4

Q ss_pred             ceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccC-cCCCcccccccccce
Q psy14511          6 NLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLD-AKRPQVNNQCHLSAV   83 (488)
Q Consensus         6 ~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~-~~~~~~~~~~h~~~v   83 (488)
                      ..+.+++.|.+.+||.++++.++ ..+.||.+.|++++|++.+.++++++ |++-.||...-.- .+.... ..+|++.=
T Consensus       161 pi~gtASADhTA~iWs~Esg~CL-~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a-~~~hSsEe  238 (481)
T KOG0300|consen  161 PICGTASADHTARIWSLESGACL-ATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNA-PSDHSSEE  238 (481)
T ss_pred             cceeecccccceeEEeeccccce-eeecccccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCC-CCCCCchh
Confidence            46788999999999999999987 55899999999999999999999998 9999999843110 011000 11222110


Q ss_pred             eEEEEe-cCCCeEEeeeCCccc-ceEEEE--ecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeecccccee
Q psy14511         84 KAIAWC-PWEPTLLATGGGICD-QTVRLW--NSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVL  159 (488)
Q Consensus        84 ~~l~~~-~~~~~l~~~~~~~~d-~~i~vw--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (488)
                       .+.-+ .+.+.  ..++...| .+|++=  .+ +|..-.                                        
T Consensus       239 -E~e~sDe~~~d--~d~~~~sD~~tiRvPl~~l-tgH~~v----------------------------------------  274 (481)
T KOG0300|consen  239 -EEEHSDEHNRD--TDSSEKSDGHTIRVPLMRL-TGHRAV----------------------------------------  274 (481)
T ss_pred             -hhhcccccccc--cccccccCCceeeeeeeee-eccccc----------------------------------------
Confidence             00000 11111  11000002 233321  22 111100                                        


Q ss_pred             ccccccccceeeecccccccccccCCCceeecCCCccccceeeeeee--CCCcEEEEECCCeEEEEECCCCceEEEEecC
Q psy14511        160 NQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDW--GYHDTLAVALDTSVYTWNTKTNKTQLLVEYP  237 (488)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~  237 (488)
                                                               +.+.+|  ...++++++.|.+-.+||+++++.+..+.. 
T Consensus       275 -----------------------------------------V~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtG-  312 (481)
T KOG0300|consen  275 -----------------------------------------VSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTG-  312 (481)
T ss_pred             -----------------------------------------eEehhhhcCcceeeeeeccccceeeeeccCceeccccC-
Confidence                                                     000111  235677888888888888888877666554 


Q ss_pred             CCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcc-eeeeeeccccccEEEEEe-cCCEEEEeecCCeEEEEECcCCC
Q psy14511        238 TYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEE-RLIQKLRTHMHQVIAMCW-NGNLLSCGTIGGNILHYDVRTHS  315 (488)
Q Consensus       238 ~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~-~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~  315 (488)
                        |....+.++-+|..++++++ +.|.+.++||++.. ..+..+++|...|++..| .+..+++|+.|.+|++||+++..
T Consensus       313 --Hd~ELtHcstHptQrLVvTs-SrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~dd~vVSgSDDrTvKvWdLrNMR  389 (481)
T KOG0300|consen  313 --HDSELTHCSTHPTQRLVVTS-SRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTDDRVVSGSDDRTVKVWDLRNMR  389 (481)
T ss_pred             --cchhccccccCCcceEEEEe-ccCceeEeccchhhcceeeeecccccceeEEEEecCCceeecCCCceEEEeeecccc
Confidence              88889999999998888888 99999999999853 456788999999999999 58899999999999999999988


Q ss_pred             ccceeeecCCccEEEEEEccCCcEEEEEec-CeEEEEECCCCCCCcccc-------eeee--eecCCC--CEEEEEccCC
Q psy14511        316 DYPTAITREGDVVCGLKWSPNGRYLASGSN-NTVKIWDFRQLDAKRPLG-------LIVP--KLKREG--RELVTSHGKQ  383 (488)
Q Consensus       316 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d-~~i~iwd~~~~~~~~~~~-------~~~~--~~~~~~--~~l~~~~g~~  383 (488)
                      .++..+.. .++++.++.+..+..+|.--| ..|++||+......+.-+       .++.  +|..+-  ..|++  .+-
T Consensus       390 splATIRt-dS~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~RlaRlPrtsRqgHrRMV~c~AW~eehp~cnLft--cGF  466 (481)
T KOG0300|consen  390 SPLATIRT-DSPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRLARLPRTSRQGHRRMVTCCAWLEEHPACNLFT--CGF  466 (481)
T ss_pred             Ccceeeec-CCccceeEeecCCceEEeccCCceEEEEecCCCccccCCcccccccceeeeeeeccccCccccccc--ccc
Confidence            77777665 456899999988889999887 999999998654433221       1122  454332  23444  466


Q ss_pred             CCeEEEEeCCC
Q psy14511        384 DCSLKMWEYPR  394 (488)
Q Consensus       384 ~~~i~i~d~~~  394 (488)
                      |..+.-|.+..
T Consensus       467 DR~v~gW~in~  477 (481)
T KOG0300|consen  467 DRMVAGWKINT  477 (481)
T ss_pred             cceeeeeEecc
Confidence            78888887654

>KOG0301|consensus

Probab=99.94  E-value=5.5e-25  Score=194.49  Aligned_cols=261  Identities=13%  Similarity=0.223  Sum_probs=209.3

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccc-eeecccCceEEE-EEEcc-CCcEEEEec-CCeEEEEeccccCcCCCccccccc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYP-TAITREGDVVCG-LKWSP-NGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCH   79 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~-~~~~~h~~~V~~-l~~sp-~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h   79 (488)
                      ++..+++++.||++++|+-..++.+. +.+.+|.+-|.+ +++-+ ++-.|++|+ |..|.+|...+   ..++..+.+|
T Consensus        24 ~~~~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~v~~~~~---~~P~~~LkgH  100 (745)
T KOG0301|consen   24 DGVCIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTTIIVFKLSQ---AEPLYTLKGH  100 (745)
T ss_pred             CCeEEeecCCCCceeeeeccCcccccceecccCcceeeccceeccccCcceEeecccceEEEEecCC---CCchhhhhcc
Confidence            45578999999999999987766554 567788888877 88886 444688888 99999999876   5577789999


Q ss_pred             ccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeecccccee
Q psy14511         80 LSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVL  159 (488)
Q Consensus        80 ~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (488)
                      ...|.+++-..++.  +.+|+  +|.++++|..  +++...+.+|...+..+.                           
T Consensus       101 ~snVC~ls~~~~~~--~iSgS--WD~TakvW~~--~~l~~~l~gH~asVWAv~---------------------------  147 (745)
T KOG0301|consen  101 KSNVCSLSIGEDGT--LISGS--WDSTAKVWRI--GELVYSLQGHTASVWAVA---------------------------  147 (745)
T ss_pred             ccceeeeecCCcCc--eEecc--cccceEEecc--hhhhcccCCcchheeeee---------------------------
Confidence            99999999877774  44555  6999999975  455555555544333221                           


Q ss_pred             ccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCC
Q psy14511        160 NQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTY  239 (488)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~  239 (488)
                                                                   .+..+.+++++.|..|++|.-  ++....+.  + 
T Consensus       148 ---------------------------------------------~l~e~~~vTgsaDKtIklWk~--~~~l~tf~--g-  177 (745)
T KOG0301|consen  148 ---------------------------------------------SLPENTYVTGSADKTIKLWKG--GTLLKTFS--G-  177 (745)
T ss_pred             ---------------------------------------------ecCCCcEEeccCcceeeeccC--Cchhhhhc--c-
Confidence                                                         223457999999999999986  44444444  4 


Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCcc
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDY  317 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~  317 (488)
                      |...|+.+++-+++ .++++ +.||.|++|++ +++++.++.+|..-+++++.  ++..++++++|+++++|+..   .+
T Consensus       178 HtD~VRgL~vl~~~-~flSc-sNDg~Ir~w~~-~ge~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~---e~  251 (745)
T KOG0301|consen  178 HTDCVRGLAVLDDS-HFLSC-SNDGSIRLWDL-DGEVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD---EC  251 (745)
T ss_pred             chhheeeeEEecCC-CeEee-cCCceEEEEec-cCceeeeeeccceEEEEEEecCCCCeEEEecCCceEEEeecC---ce
Confidence            99999999999876 56666 79999999999 77899999999999999995  78999999999999999987   46


Q ss_pred             ceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCC
Q psy14511        318 PTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQL  356 (488)
Q Consensus       318 ~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~  356 (488)
                      .+.+......|+++.+-++|..++.|+||.|+||..+..
T Consensus       252 ~q~I~lPttsiWsa~~L~NgDIvvg~SDG~VrVfT~~k~  290 (745)
T KOG0301|consen  252 VQVITLPTTSIWSAKVLLNGDIVVGGSDGRVRVFTVDKD  290 (745)
T ss_pred             EEEEecCccceEEEEEeeCCCEEEeccCceEEEEEeccc
Confidence            677777777899999999999998888999999998743

>KOG1036|consensus

Probab=99.94  E-value=2.5e-24  Score=172.31  Aligned_cols=255  Identities=15%  Similarity=0.206  Sum_probs=189.9

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSA   82 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~   82 (488)
                      .++.|++++.||++++||+......  ..-.|..++.+++|.++ ..+++|+ ||.|+.+|++++....    +..|..+
T Consensus        24 ~~~~LLvssWDgslrlYdv~~~~l~--~~~~~~~plL~c~F~d~-~~~~~G~~dg~vr~~Dln~~~~~~----igth~~~   96 (323)
T KOG1036|consen   24 SSSDLLVSSWDGSLRLYDVPANSLK--LKFKHGAPLLDCAFADE-STIVTGGLDGQVRRYDLNTGNEDQ----IGTHDEG   96 (323)
T ss_pred             cCCcEEEEeccCcEEEEeccchhhh--hheecCCceeeeeccCC-ceEEEeccCceEEEEEecCCccee----eccCCCc
Confidence            4556677789999999999987532  33468889999999975 4566666 9999999999865432    4569999


Q ss_pred             eeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccc
Q psy14511         83 VKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQS  162 (488)
Q Consensus        83 v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (488)
                      |.+|.+++-...+++ |+  +|++|++||.+.......+...                                      
T Consensus        97 i~ci~~~~~~~~vIs-gs--WD~~ik~wD~R~~~~~~~~d~~--------------------------------------  135 (323)
T KOG1036|consen   97 IRCIEYSYEVGCVIS-GS--WDKTIKFWDPRNKVVVGTFDQG--------------------------------------  135 (323)
T ss_pred             eEEEEeeccCCeEEE-cc--cCccEEEEeccccccccccccC--------------------------------------
Confidence            999999986555444 44  5999999998763322221111                                      


Q ss_pred             cccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCC
Q psy14511        163 KRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNA  242 (488)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~  242 (488)
                                                          -.+.+++..++.+++++.+..+.+||+++........... ..-
T Consensus       136 ------------------------------------kkVy~~~v~g~~LvVg~~~r~v~iyDLRn~~~~~q~reS~-lky  178 (323)
T KOG1036|consen  136 ------------------------------------KKVYCMDVSGNRLVVGTSDRKVLIYDLRNLDEPFQRRESS-LKY  178 (323)
T ss_pred             ------------------------------------ceEEEEeccCCEEEEeecCceEEEEEcccccchhhhcccc-cee
Confidence                                                1233455567889999999999999999876544222222 566


Q ss_pred             ceEEEEEcCCCCeEEEEeCCCCcEEEEECCcc----eeeeeecccc---------ccEEEEEec--CCEEEEeecCCeEE
Q psy14511        243 YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEE----RLIQKLRTHM---------HQVIAMCWN--GNLLSCGTIGGNIL  307 (488)
Q Consensus       243 ~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~----~~~~~~~~~~---------~~v~~~~~~--~~~l~~~~~dg~i~  307 (488)
                      .+.|+++.|++.-.+++ +-+|.|.+=.++..    +....++.|.         -+|.+++|.  -..+++|+.||.|.
T Consensus       179 qtR~v~~~pn~eGy~~s-SieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~tfaTgGsDG~V~  257 (323)
T KOG1036|consen  179 QTRCVALVPNGEGYVVS-SIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGTFATGGSDGIVN  257 (323)
T ss_pred             EEEEEEEecCCCceEEE-eecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEeccccceEEecCCCceEE
Confidence            79999999988888888 89999988666554    2233344443         378899995  47899999999999


Q ss_pred             EEECcCCCccceeeecCCccEEEEEEccCCcEEEEEec
Q psy14511        308 HYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN  345 (488)
Q Consensus       308 i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d  345 (488)
                      +||+.+.+ .+..+......|..++|+.+|..||++++
T Consensus       258 ~Wd~~~rK-rl~q~~~~~~SI~slsfs~dG~~LAia~s  294 (323)
T KOG1036|consen  258 IWDLFNRK-RLKQLAKYETSISSLSFSMDGSLLAIASS  294 (323)
T ss_pred             EccCcchh-hhhhccCCCCceEEEEeccCCCeEEEEec
Confidence            99999854 45556666777999999999999999874

>KOG2445|consensus

Probab=99.94  E-value=4.7e-24  Score=170.62  Aligned_cols=296  Identities=16%  Similarity=0.287  Sum_probs=201.8

Q ss_pred             eecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccC-cCCCcccccccccceeEEEEec-CCCeEEeeeCCcccceE
Q psy14511         31 AITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLD-AKRPQVNNQCHLSAVKAIAWCP-WEPTLLATGGGICDQTV  107 (488)
Q Consensus        31 ~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~-~~~~~~~~~~h~~~v~~l~~~~-~~~~l~~~~~~~~d~~i  107 (488)
                      +..+|.+-|+++.|.+.|+.+|+++ |.+|+|||.++.. ...+....+.|.+.|..+.|.+ .-..++++++  +|+++
T Consensus         8 i~s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS--~Drtv   85 (361)
T KOG2445|consen    8 IDSGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCS--YDRTV   85 (361)
T ss_pred             cccCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEe--cCCce
Confidence            4568999999999999999999998 9999999965432 2344555788999999999954 3224556665  49999


Q ss_pred             EEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCc
Q psy14511        108 RLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPE  187 (488)
Q Consensus       108 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (488)
                      .||.-....    ...                                                                
T Consensus        86 ~iWEE~~~~----~~~----------------------------------------------------------------   97 (361)
T KOG2445|consen   86 SIWEEQEKS----EEA----------------------------------------------------------------   97 (361)
T ss_pred             eeeeecccc----ccc----------------------------------------------------------------
Confidence            999743111    000                                                                


Q ss_pred             eeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCC--CCeEEEEeCCCCc
Q psy14511        188 RILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPR--TTDLAVTNTCTEY  265 (488)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~~~~~  265 (488)
                                                            ...+.+....+.. ....++.+.|.|.  |-.++++ +.||.
T Consensus        98 --------------------------------------~~~~Wv~~ttl~D-srssV~DV~FaP~hlGLklA~~-~aDG~  137 (361)
T KOG2445|consen   98 --------------------------------------HGRRWVRRTTLVD-SRSSVTDVKFAPKHLGLKLAAA-SADGI  137 (361)
T ss_pred             --------------------------------------ccceeEEEEEeec-CCcceeEEEecchhcceEEEEe-ccCcE
Confidence                                                  0111222223333 6778999999996  4566666 99999


Q ss_pred             EEEEECCcceee------eeec-------cccccEEEEEec-----CCEEEEeecC-----CeEEEEECcCCC---ccce
Q psy14511        266 IDLWHEQEERLI------QKLR-------THMHQVIAMCWN-----GNLLSCGTIG-----GNILHYDVRTHS---DYPT  319 (488)
Q Consensus       266 i~i~d~~~~~~~------~~~~-------~~~~~v~~~~~~-----~~~l~~~~~d-----g~i~i~d~~~~~---~~~~  319 (488)
                      ++||+......+      ..++       .+..+..|+.|+     ..+|+.|+.+     +.++||......   ....
T Consensus       138 lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva  217 (361)
T KOG2445|consen  138 LRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVA  217 (361)
T ss_pred             EEEEecCCccccccchhhhhhhhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeeh
Confidence            999986543222      2222       356677889983     4678888766     578899877654   2344


Q ss_pred             eeecCCccEEEEEEccCC----cEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCC
Q psy14511        320 AITREGDVVCGLKWSPNG----RYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPR  394 (488)
Q Consensus       320 ~~~~~~~~i~~~~~s~~~----~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~  394 (488)
                      .+..|.++|+.++|.|+-    ..||+++ || |+||.++.......-           +.+..  +..-..+   +   
T Consensus       218 ~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~I~~v~~~~s~i~~-----------ee~~~--~~~~~~l---~---  277 (361)
T KOG2445|consen  218 ELPDHTDPIRDISWAPNIGRSYHLLAVATKDG-VRIFKVKVARSAIEE-----------EEVLA--PDLMTDL---P---  277 (361)
T ss_pred             hcCCCCCcceeeeeccccCCceeeEEEeecCc-EEEEEEeeccchhhh-----------hcccC--CCCcccc---c---
Confidence            577899999999999953    5788888 68 999999753110000           00000  0111111   1   


Q ss_pred             cceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcc---ccccccCCcceEEeec
Q psy14511        395 LHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKK---RKARQVGSGSSLEFAI  456 (488)
Q Consensus       395 ~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~---~~~~~~~~v~~~~~s~  456 (488)
                      -+.+..+.+|++.|+.+.|.-.|..|++.+.||.|++|...-....   ......+.+....|++
T Consensus       278 v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWkany~n~~kC~sv~~~e~~~~~~~~~~  342 (361)
T KOG2445|consen  278 VEKVSELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKANYNNLWKCTSVLKAEGSVTKPDFSQ  342 (361)
T ss_pred             eEEeeeccCCCCceEEEEEeeeeeEEeecCCCceeeehhhhhhhhheeeeEEeccCCCCCccccc
Confidence            2456678899999999999999999999999999999987644332   2344445555666655

>KOG0289|consensus

Probab=99.94  E-value=7.9e-24  Score=177.05  Aligned_cols=263  Identities=15%  Similarity=0.265  Sum_probs=208.3

Q ss_pred             ceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCC
Q psy14511         37 DVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNG  115 (488)
Q Consensus        37 ~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~  115 (488)
                      ..++++...|....+++|+ |..+.++|..+   .+.+..+.||...|+.+.|+|+...+++...   |..|++|.....
T Consensus       220 pgi~ald~~~s~~~ilTGG~d~~av~~d~~s---~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSa---d~~i~vws~~~~  293 (506)
T KOG0289|consen  220 PGITALDIIPSSSKILTGGEDKTAVLFDKPS---NQILATLKGHTKKITSVKFHKDLDTVITASA---DEIIRVWSVPLS  293 (506)
T ss_pred             CCeeEEeecCCCCcceecCCCCceEEEecch---hhhhhhccCcceEEEEEEeccchhheeecCC---cceEEeeccccc
Confidence            4688888888878999999 99999999876   5567779999999999999999877666665   999999997543


Q ss_pred             eeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCc
Q psy14511        116 KEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSI  195 (488)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (488)
                      ....                                                                            
T Consensus       294 s~~~----------------------------------------------------------------------------  297 (506)
T KOG0289|consen  294 SEPT----------------------------------------------------------------------------  297 (506)
T ss_pred             cCcc----------------------------------------------------------------------------
Confidence            3110                                                                            


Q ss_pred             cccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcce
Q psy14511        196 INDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEER  275 (488)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~  275 (488)
                                                           ...  . |..+|+.+..+|.|.|++.+ +.|++..+.|++++.
T Consensus       298 -------------------------------------~~~--~-h~~~V~~ls~h~tgeYllsA-s~d~~w~Fsd~~~g~  336 (506)
T KOG0289|consen  298 -------------------------------------SSR--P-HEEPVTGLSLHPTGEYLLSA-SNDGTWAFSDISSGS  336 (506)
T ss_pred             -------------------------------------ccc--c-ccccceeeeeccCCcEEEEe-cCCceEEEEEccCCc
Confidence                                                 001  1 88899999999999999999 999999999999998


Q ss_pred             eeeeecc--ccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEec-CeEEE
Q psy14511        276 LIQKLRT--HMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN-NTVKI  350 (488)
Q Consensus       276 ~~~~~~~--~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d-~~i~i  350 (488)
                      .+.....  ..-.+++..|  ||..+.+|..|+.+++||+.++. ....+.+|.++|..++|+.+|.+||+++| +.|++
T Consensus       337 ~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~-~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~l  415 (506)
T KOG0289|consen  337 QLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQT-NVAKFPGHTGPVKAISFSENGYWLATAADDGSVKL  415 (506)
T ss_pred             EEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCCcc-ccccCCCCCCceeEEEeccCceEEEEEecCCeEEE
Confidence            8776654  2345788888  89999999999999999999864 78889999999999999999999999985 77888


Q ss_pred             EECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEee-ccccEEEEEEcCCCCEEEEEeCCCcE
Q psy14511        351 WDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKI-HQERILSAVLSPDQTCVAAASADETI  429 (488)
Q Consensus       351 wd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~t~~~dg~v  429 (488)
                      ||++..+                                       ...++.- ...++.++.|.+.|.+|+.++.|=.|
T Consensus       416 wDLRKl~---------------------------------------n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l~V  456 (506)
T KOG0289|consen  416 WDLRKLK---------------------------------------NFKTIQLDEKKEVNSLSFDQSGTYLGIAGSDLQV  456 (506)
T ss_pred             EEehhhc---------------------------------------ccceeeccccccceeEEEcCCCCeEEeecceeEE
Confidence            8888652                                       1222221 12368999999999999999888666


Q ss_pred             EEEecCCCC--cc-ccccccCCcceEEeecCCCceE
Q psy14511        430 SIWNCFPRD--KK-RKARQVGSGSSLEFAILKQPVS  462 (488)
Q Consensus       430 ~iw~~~~~~--~~-~~~~~~~~v~~~~~s~~~~~~~  462 (488)
                      ++++-.+..  .. ....|.+..+.+.|....+.+.
T Consensus       457 y~~~k~~k~W~~~~~~~~~sg~st~v~Fg~~aq~l~  492 (506)
T KOG0289|consen  457 YICKKKTKSWTEIKELADHSGLSTGVRFGEHAQYLA  492 (506)
T ss_pred             EEEecccccceeeehhhhcccccceeeecccceEEe
Confidence            666643332  22 3455677888888887666663

>KOG0639|consensus

Probab=99.94  E-value=7.7e-25  Score=186.49  Aligned_cols=217  Identities=16%  Similarity=0.222  Sum_probs=182.8

Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeee--eccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCC
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQK--LRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHS  315 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~--~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~  315 (488)
                      ....|.++.+.|||+.|+++ +.-.++.|||+........  +........+++.  |.+..+++..||.|.|||+.+. 
T Consensus       464 rdnyiRSckL~pdgrtLivG-GeastlsiWDLAapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq-  541 (705)
T KOG0639|consen  464 RDNYIRSCKLLPDGRTLIVG-GEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQ-  541 (705)
T ss_pred             cccceeeeEecCCCceEEec-cccceeeeeeccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccc-
Confidence            56789999999999999999 8899999999987544322  2222234444444  7899999999999999999984 


Q ss_pred             ccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCccccee----eeeecCCCCEEEEEccCCCCeEEEE
Q psy14511        316 DYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLI----VPKLKREGRELVTSHGKQDCSLKMW  390 (488)
Q Consensus       316 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~----~~~~~~~~~~l~~~~g~~~~~i~i~  390 (488)
                      ..++.+.+|.+.+.|+.+++||..|-+|+ |++++.||++.+...+.....    .-.++|.+.++++  |.+++.+.+.
T Consensus       542 ~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrqlqqhdF~SQIfSLg~cP~~dWlav--GMens~vevl  619 (705)
T KOG0639|consen  542 TLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQHDFSSQIFSLGYCPTGDWLAV--GMENSNVEVL  619 (705)
T ss_pred             eeeecccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhhhhhhhhhhheecccCCCccceee--ecccCcEEEE
Confidence            68899999999999999999999999999 899999999988655443322    2377899999999  8999999998


Q ss_pred             eCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccccccccCCcceEEeecCCCce
Q psy14511        391 EYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKARQVGSGSSLEFAILKQPV  461 (488)
Q Consensus       391 d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~~~~~~~v~~~~~s~~~~~~  461 (488)
                      ..... ....+.-|.+.|.++.|++.|+++++.+.|..+..|...-+..+-...+...|.++..|-+.+++
T Consensus       620 h~skp-~kyqlhlheScVLSlKFa~cGkwfvStGkDnlLnawrtPyGasiFqskE~SsVlsCDIS~ddkyI  689 (705)
T KOG0639|consen  620 HTSKP-EKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISFDDKYI  689 (705)
T ss_pred             ecCCc-cceeecccccEEEEEEecccCceeeecCchhhhhhccCccccceeeccccCcceeeeeccCceEE
Confidence            86543 34556679999999999999999999999999999999999998888889999999999988877

>KOG0269|consensus

Probab=99.93  E-value=9.4e-25  Score=195.42  Aligned_cols=230  Identities=17%  Similarity=0.292  Sum_probs=186.7

Q ss_pred             CCcEEEEECCCeEEEEECCCCc-eEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecccccc
Q psy14511        208 YHDTLAVALDTSVYTWNTKTNK-TQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQ  286 (488)
Q Consensus       208 ~~~~~~~~~d~~v~iw~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~  286 (488)
                      .+.+++++..|.|.+||+.... ......+.. |...++++.|++....++.+|++||.|++||++..+...++.+....
T Consensus       100 ~NlIAT~s~nG~i~vWdlnk~~rnk~l~~f~E-H~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSES  178 (839)
T KOG0269|consen  100 SNLIATCSTNGVISVWDLNKSIRNKLLTVFNE-HERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSES  178 (839)
T ss_pred             hhhheeecCCCcEEEEecCccccchhhhHhhh-hccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccchh
Confidence            3567777899999999998721 112222223 89999999999988777777799999999999998888888888889


Q ss_pred             EEEEEe---cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCccc
Q psy14511        287 VIAMCW---NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPL  362 (488)
Q Consensus       287 v~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~  362 (488)
                      |..+.|   .+..++++...|.+++||++....+...+.+|.++|.++.|+|++.+||+|+ |+.|+|||+.+.+.....
T Consensus       179 iRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~~~  258 (839)
T KOG0269|consen  179 IRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAKPKH  258 (839)
T ss_pred             hhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCCcccee
Confidence            999999   5899999999999999999999899999999999999999999999999999 799999999876443322


Q ss_pred             --ceeee----eecCCCCEEE-EEccCCCCeEEEEeCCCc-ceeEEEeeccccEEEEEEcC-CCCEEEEEeCCCcEEEEe
Q psy14511        363 --GLIVP----KLKREGRELV-TSHGKQDCSLKMWEYPRL-HLIEELKIHQERILSAVLSP-DQTCVAAASADETISIWN  433 (488)
Q Consensus       363 --~~~~~----~~~~~~~~l~-~~~g~~~~~i~i~d~~~~-~~~~~~~~~~~~v~~~~~s~-~~~~l~t~~~dg~v~iw~  433 (488)
                        .+...    .|-|...+.+ +++-..|-.|+|||++.. -+..++..|...++.++|-. |...|.+++.||.|..-.
T Consensus       259 tInTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP~~t~~eH~~~vt~i~W~~~d~~~l~s~sKD~tv~qh~  338 (839)
T KOG0269|consen  259 TINTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYIPYATFLEHTDSVTGIAWDSGDRINLWSCSKDGTVLQHL  338 (839)
T ss_pred             EEeecceeeeeeeccCccchhhhhhccccceEEEEeeccccccceeeeccCccccceeccCCCceeeEeecCccHHHHhh
Confidence              11111    8888877654 444455889999999764 46678899999999999965 556889999999987666


Q ss_pred             cCCCC
Q psy14511        434 CFPRD  438 (488)
Q Consensus       434 ~~~~~  438 (488)
                      +.+..
T Consensus       339 ~knat  343 (839)
T KOG0269|consen  339 FKNAT  343 (839)
T ss_pred             hhccc
Confidence            55443

>KOG1273|consensus

Probab=99.93  E-value=5.6e-24  Score=170.74  Aligned_cols=277  Identities=17%  Similarity=0.241  Sum_probs=199.7

Q ss_pred             ccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccc
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHL   80 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~   80 (488)
                      +..|.+||+|+.||.|.|||..+.. +.+.+.+|..+|++++||+||++|++++ |..|.+||+..+.....+.    ..
T Consensus        32 s~~G~~lAvGc~nG~vvI~D~~T~~-iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rir----f~  106 (405)
T KOG1273|consen   32 SRWGDYLAVGCANGRVVIYDFDTFR-IARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIR----FD  106 (405)
T ss_pred             ccCcceeeeeccCCcEEEEEccccc-hhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEE----cc
Confidence            4579999999999999999999987 6788999999999999999999999999 9999999999876443332    46


Q ss_pred             cceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceec
Q psy14511         81 SAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLN  160 (488)
Q Consensus        81 ~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (488)
                      ++|+...|+|..+..+++.-  .+..-.+-++..++..........   ...                            
T Consensus       107 spv~~~q~hp~k~n~~va~~--~~~sp~vi~~s~~~h~~Lp~d~d~---dln----------------------------  153 (405)
T KOG1273|consen  107 SPVWGAQWHPRKRNKCVATI--MEESPVVIDFSDPKHSVLPKDDDG---DLN----------------------------  153 (405)
T ss_pred             CccceeeeccccCCeEEEEE--ecCCcEEEEecCCceeeccCCCcc---ccc----------------------------
Confidence            89999999997665555443  144445555543221110000000   000                            


Q ss_pred             cccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCC
Q psy14511        161 QSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYD  240 (488)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~  240 (488)
                      ..                                    .....++-.++.+++|...|.+.+++..+-+++..++..  .
T Consensus       154 ~s------------------------------------as~~~fdr~g~yIitGtsKGkllv~~a~t~e~vas~rit--s  195 (405)
T KOG1273|consen  154 SS------------------------------------ASHGVFDRRGKYIITGTSKGKLLVYDAETLECVASFRIT--S  195 (405)
T ss_pred             cc------------------------------------cccccccCCCCEEEEecCcceEEEEecchheeeeeeeec--h
Confidence            00                                    000012234567888889999999999999888777663  3


Q ss_pred             CCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcc---------eeeeeecc--ccccEEEEEe--cCCEEEEeec-CCeE
Q psy14511        241 NAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEE---------RLIQKLRT--HMHQVIAMCW--NGNLLSCGTI-GGNI  306 (488)
Q Consensus       241 ~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~---------~~~~~~~~--~~~~v~~~~~--~~~~l~~~~~-dg~i  306 (488)
                      ...|..+.++..|+.+++- +.|..|+.|+++.-         ++.+.++.  ....-.+++|  +|.++++++. -..+
T Consensus       196 ~~~IK~I~~s~~g~~liiN-tsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~ccfs~dgeYv~a~s~~aHaL  274 (405)
T KOG1273|consen  196 VQAIKQIIVSRKGRFLIIN-TSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKKCCFSGDGEYVCAGSARAHAL  274 (405)
T ss_pred             heeeeEEEEeccCcEEEEe-cCCceEEEEehhhhcccCccCCcChhHHHHHHHhhhhhhheeecCCccEEEeccccceeE
Confidence            4689999999999999999 99999999997631         11111211  1122244555  6788877764 4679


Q ss_pred             EEEECcCCCccceeeecCC-ccEEEEEEccCCcEEEEEecCeEEEEECCCC
Q psy14511        307 LHYDVRTHSDYPTAITREG-DVVCGLKWSPNGRYLASGSNNTVKIWDFRQL  356 (488)
Q Consensus       307 ~i~d~~~~~~~~~~~~~~~-~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~  356 (488)
                      ++|.-..+ .+++.+.+.. .....+.|+|-...+++-..|.+++|.....
T Consensus       275 YIWE~~~G-sLVKILhG~kgE~l~DV~whp~rp~i~si~sg~v~iw~~~~~  324 (405)
T KOG1273|consen  275 YIWEKSIG-SLVKILHGTKGEELLDVNWHPVRPIIASIASGVVYIWAVVQV  324 (405)
T ss_pred             EEEecCCc-ceeeeecCCchhheeecccccceeeeeeccCCceEEEEeecc
Confidence            99999886 5788888877 5677899999998898887799999987654

>KOG0321|consensus

Probab=99.93  E-value=8.6e-24  Score=185.28  Aligned_cols=404  Identities=17%  Similarity=0.207  Sum_probs=251.0

Q ss_pred             CCceEEEeecCCeEEEEEcccCccc-----ceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCccccc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDY-----PTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQ   77 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~-----~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~   77 (488)
                      ....||.+..||.|.++|.......     ......|.+.|..+.|-|....|++++ |.++++||+++.+.... ..+.
T Consensus        63 ~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~-~~~~  141 (720)
T KOG0321|consen   63 KEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGG-RLNL  141 (720)
T ss_pred             ccceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeeccceeecc-eeec
Confidence            4568999999999999998764321     234568999999999999666788887 99999999997554332 2478


Q ss_pred             ccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCee--eeeeecCCCccccccccccccccceeEEEEEeeeeccc
Q psy14511         78 CHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKE--KCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDR  155 (488)
Q Consensus        78 ~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (488)
                      +|.+.|.+++|.|+++.++++|+.  ||.|.|||++-...  ...+...                               
T Consensus       142 GH~~SvkS~cf~~~n~~vF~tGgR--Dg~illWD~R~n~~d~~e~~~~~-------------------------------  188 (720)
T KOG0321|consen  142 GHTGSVKSECFMPTNPAVFCTGGR--DGEILLWDCRCNGVDALEEFDNR-------------------------------  188 (720)
T ss_pred             ccccccchhhhccCCCcceeeccC--CCcEEEEEEeccchhhHHHHhhh-------------------------------
Confidence            899999999999999999999986  99999999864331  0000000                               


Q ss_pred             cceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC-CCcEEEEEC-CCeEEEEECCCCceEEE
Q psy14511        156 KKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG-YHDTLAVAL-DTSVYTWNTKTNKTQLL  233 (488)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-d~~v~iw~~~~~~~~~~  233 (488)
                        +.....          +.. ...........-..+....-.-++..+-+- ...+++++. |+.|++||++.......
T Consensus       189 --~~~~~n----------~~p-tpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r  255 (720)
T KOG0321|consen  189 --IYGRHN----------TAP-TPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYR  255 (720)
T ss_pred             --hhcccc----------CCC-CCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccc
Confidence              000000          000 000000000000000000011123334443 455666664 99999999987653322


Q ss_pred             ------EecCCCC---CCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcce--eeeeecccccc----EEEEEecCCEEE
Q psy14511        234 ------VEYPTYD---NAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEER--LIQKLRTHMHQ----VIAMCWNGNLLS  298 (488)
Q Consensus       234 ------~~~~~~~---~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~--~~~~~~~~~~~----v~~~~~~~~~l~  298 (488)
                            ..++. +   ...+.++.....|.+|++. +.|+.|+.|++....  ++..+.++...    -..+.+++.+++
T Consensus       256 ~ep~~~~~~~t-~skrs~G~~nL~lDssGt~L~As-CtD~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~  333 (720)
T KOG0321|consen  256 QEPRGSDKYPT-HSKRSVGQVNLILDSSGTYLFAS-CTDNSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLL  333 (720)
T ss_pred             cCCCcccCccC-cccceeeeEEEEecCCCCeEEEE-ecCCcEEEEeccccCcCchhhccCcccceeeeeeecCCCCceEe
Confidence                  22221 2   3457788888889999999 679999999997632  33333333221    134556999999


Q ss_pred             EeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCC-cEEEEEe-cCeEEEEECCCCCCCcccce-------eee--
Q psy14511        299 CGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNG-RYLASGS-NNTVKIWDFRQLDAKRPLGL-------IVP--  367 (488)
Q Consensus       299 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~-d~~i~iwd~~~~~~~~~~~~-------~~~--  367 (488)
                      +|+.|...++|.+.+.......+.+|.-.|++++|.|.. .-+++++ |..++||++.++-.......       ...  
T Consensus       334 SgSsd~~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l~~~l~e~~~adk~s~v~~~~~rf  413 (720)
T KOG0321|consen  334 SGSSDEQAYIWVVSSPEAPPALLLGHTREVTTVRWLPSATTPVATCSDDFRVKIWRLSNGLEEIYAADKDSIVYEYSRRF  413 (720)
T ss_pred             ccCCCcceeeeeecCccCChhhhhCcceEEEEEeeccccCCCceeeccCcceEEEeccCchhhccccccchhhhhhhhhh
Confidence            999999999999999888888999999999999998844 3455557 59999999965422211000       000  


Q ss_pred             -----------------------------------eecCCCCEEEEEccCCCC--eEEEEeCCCcceeE--EEeeccccE
Q psy14511        368 -----------------------------------KLKREGRELVTSHGKQDC--SLKMWEYPRLHLIE--ELKIHQERI  408 (488)
Q Consensus       368 -----------------------------------~~~~~~~~l~~~~g~~~~--~i~i~d~~~~~~~~--~~~~~~~~v  408 (488)
                                                         +..|++.......+..+.  .|...+....++..  .-.+|-..|
T Consensus       414 k~~~p~~~nv~ss~~~t~~~pR~~~~r~~ssP~s~a~~~s~~s~~~~~~~t~qt~~i~~~p~kr~~~~ss~~s~~~~~Sv  493 (720)
T KOG0321|consen  414 KGHLPQVLNVNSSLRKTYKDPREGMNRISSSPVSLACSPSGASDDCGYGVTDQTSGIVVFPTKRNKPSSSRGSGGHLSSV  493 (720)
T ss_pred             hccccccccccccccccccchhhhccccccCccchhcCcCCcccccCCCcccccccceecchhccCcccccccccccccc
Confidence                                               112222222221111111  12222222222111  112356677


Q ss_pred             EEEEEcCCCCEEEEEeC-----------CCcEEEEecCCCCccccccccCCcceEEeec
Q psy14511        409 LSAVLSPDQTCVAAASA-----------DETISIWNCFPRDKKRKARQVGSGSSLEFAI  456 (488)
Q Consensus       409 ~~~~~s~~~~~l~t~~~-----------dg~v~iw~~~~~~~~~~~~~~~~v~~~~~s~  456 (488)
                      +...|++.+..+++.+-           ++.++.|......+............+.|+|
T Consensus       494 s~~d~ss~~s~~~s~SP~~~~~stpp~sets~~s~~s~l~pps~~~r~ar~~~r~ifs~  552 (720)
T KOG0321|consen  494 SAEDWSSEKSQLASRSPQKNRGSTPPISETSVNSPNSSLHPPSANLREARKKSRLIFSP  552 (720)
T ss_pred             ccCCCccccccccccCcccccCCCCCcCcccccccccccCCchhhhcccccccceeccC
Confidence            77788887878888888           8899999887666554333323556666666

>KOG2096|consensus

Probab=99.93  E-value=2.2e-23  Score=167.58  Aligned_cols=275  Identities=14%  Similarity=0.237  Sum_probs=192.3

Q ss_pred             CccCCceEEEeecCCeEEEEEcccCcccce-ee--cccCceEEEEEEccCCcEEEEec--CCeEEEEeccccCcCC---C
Q psy14511          1 MCWNGNLLSCGTIGGNILHYDVRTHSDYPT-AI--TREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAKR---P   72 (488)
Q Consensus         1 ~~~dg~~la~g~~dg~i~iwd~~~~~~~~~-~~--~~h~~~V~~l~~sp~g~~las~~--d~~i~vwd~~~~~~~~---~   72 (488)
                      |+.||++||+++.|++|+||+++......+ .+  .-.-+--+.++|+||-+-++..-  ...+++|.....+...   .
T Consensus        94 FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l~vyk~~K~~dG~~~~~  173 (420)
T KOG2096|consen   94 FSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKLCVYKLVKKTDGSGSHH  173 (420)
T ss_pred             EcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEEEEEEeeecccCCCCcc
Confidence            356999999999999999999986442211 11  11112347789999988665553  7899999875422111   1


Q ss_pred             c------ccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEE
Q psy14511         73 Q------VNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSF  146 (488)
Q Consensus        73 ~------~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (488)
                      .      ....-|.-.|..+.....++++++++.   |..|.+|++. |+.+..+............+|           
T Consensus       174 ~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~---dt~i~lw~lk-Gq~L~~idtnq~~n~~aavSP-----------  238 (420)
T KOG2096|consen  174 FVHIDNLEFERKHQVDIINIGIAGNAKYIMSASL---DTKICLWDLK-GQLLQSIDTNQSSNYDAAVSP-----------  238 (420)
T ss_pred             cccccccccchhcccceEEEeecCCceEEEEecC---CCcEEEEecC-CceeeeeccccccccceeeCC-----------
Confidence            0      012236677888888888888888877   9999999997 887777765533222222222           


Q ss_pred             EEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECC
Q psy14511        147 LLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTK  226 (488)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~  226 (488)
                                                                                  .+..+++++....|++|..-
T Consensus       239 ------------------------------------------------------------~GRFia~~gFTpDVkVwE~~  258 (420)
T KOG2096|consen  239 ------------------------------------------------------------DGRFIAVSGFTPDVKVWEPI  258 (420)
T ss_pred             ------------------------------------------------------------CCcEEEEecCCCCceEEEEE
Confidence                                                                        22334445578889999864


Q ss_pred             ---CC---ceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcc----eeeeeecc-----c---cccE-
Q psy14511        227 ---TN---KTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEE----RLIQKLRT-----H---MHQV-  287 (488)
Q Consensus       227 ---~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~----~~~~~~~~-----~---~~~v-  287 (488)
                         .|   +..+.+++.+ |...|..++|+++.+.+++. +.||++++||.+-.    +-...++.     |   ..++ 
T Consensus       259 f~kdG~fqev~rvf~LkG-H~saV~~~aFsn~S~r~vtv-SkDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~R  336 (420)
T KOG2096|consen  259 FTKDGTFQEVKRVFSLKG-HQSAVLAAAFSNSSTRAVTV-SKDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVR  336 (420)
T ss_pred             eccCcchhhhhhhheecc-chhheeeeeeCCCcceeEEE-ecCCcEEEeeccceEecCCCchHhhcCCcchhhcCCCceE
Confidence               23   2456677888 99999999999999999999 99999999997531    11112211     1   1222 


Q ss_pred             EEEEecCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEEC
Q psy14511        288 IAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDF  353 (488)
Q Consensus       288 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~  353 (488)
                      ..++++|+.|+.. ....+++|..+.++.....-..|...|.+++|+|+|+++++++|..++++.-
T Consensus       337 L~lsP~g~~lA~s-~gs~l~~~~se~g~~~~~~e~~h~~~Is~is~~~~g~~~atcGdr~vrv~~n  401 (420)
T KOG2096|consen  337 LELSPSGDSLAVS-FGSDLKVFASEDGKDYPELEDIHSTTISSISYSSDGKYIATCGDRYVRVIRN  401 (420)
T ss_pred             EEeCCCCcEEEee-cCCceEEEEcccCccchhHHHhhcCceeeEEecCCCcEEeeecceeeeeecC
Confidence            3444477776654 4567999999988766667778999999999999999999999988888863

>KOG0321|consensus

Probab=99.93  E-value=8.5e-24  Score=185.31  Aligned_cols=277  Identities=18%  Similarity=0.271  Sum_probs=191.5

Q ss_pred             EEEEcc---CCcEEEEec-CCeEEEEeccccCc---CCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecC
Q psy14511         41 GLKWSP---NGRYLASGS-NNTVKIWDFRQLDA---KRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSM  113 (488)
Q Consensus        41 ~l~~sp---~g~~las~~-d~~i~vwd~~~~~~---~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~  113 (488)
                      +..|++   ....||.+. ||.|.++|......   .+.+..+..|.+.|.++.|.| ++.++++.++  |.++++||+.
T Consensus        54 ~~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wap-ge~~lVsasG--DsT~r~Wdvk  130 (720)
T KOG0321|consen   54 ADSFSAAPNKEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAP-GESLLVSASG--DSTIRPWDVK  130 (720)
T ss_pred             cccccCCCCccceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCC-CceeEEEccC--Cceeeeeeec
Confidence            366766   234677777 89999999875321   223455678999999999999 6666665554  9999999998


Q ss_pred             CCeeeee--eecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeec
Q psy14511        114 NGKEKCH--VKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILE  191 (488)
Q Consensus       114 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (488)
                      ++++...  +.+                                                                    
T Consensus       131 ~s~l~G~~~~~G--------------------------------------------------------------------  142 (720)
T KOG0321|consen  131 TSRLVGGRLNLG--------------------------------------------------------------------  142 (720)
T ss_pred             cceeecceeecc--------------------------------------------------------------------
Confidence            8775432  222                                                                    


Q ss_pred             CCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEEC
Q psy14511        192 APSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHE  271 (488)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~  271 (488)
                                                                      |...+.+++|.|....+++.|+.||.|.|||+
T Consensus       143 ------------------------------------------------H~~SvkS~cf~~~n~~vF~tGgRDg~illWD~  174 (720)
T KOG0321|consen  143 ------------------------------------------------HTGSVKSECFMPTNPAVFCTGGRDGEILLWDC  174 (720)
T ss_pred             ------------------------------------------------cccccchhhhccCCCcceeeccCCCcEEEEEE
Confidence                                                            55566666666666555555566666666665


Q ss_pred             Ccce---------------------------eeeeecccc----ccEEEEEe-cCCEEEEeec-CCeEEEEECcCCCccc
Q psy14511        272 QEER---------------------------LIQKLRTHM----HQVIAMCW-NGNLLSCGTI-GGNILHYDVRTHSDYP  318 (488)
Q Consensus       272 ~~~~---------------------------~~~~~~~~~----~~v~~~~~-~~~~l~~~~~-dg~i~i~d~~~~~~~~  318 (488)
                      +-..                           .+.....+.    ..|+.+.| |...|++++. |+.|++||++......
T Consensus       175 R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~  254 (720)
T KOG0321|consen  175 RCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAY  254 (720)
T ss_pred             eccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeeccccccc
Confidence            4211                           111112222    23556677 8889998887 9999999998754211


Q ss_pred             -------eeeecC---CccEEEEEEccCCcEEE-EEecCeEEEEECCCCCCCccc-------cee--eeeecCCCCEEEE
Q psy14511        319 -------TAITRE---GDVVCGLKWSPNGRYLA-SGSNNTVKIWDFRQLDAKRPL-------GLI--VPKLKREGRELVT  378 (488)
Q Consensus       319 -------~~~~~~---~~~i~~~~~s~~~~~l~-~~~d~~i~iwd~~~~~~~~~~-------~~~--~~~~~~~~~~l~~  378 (488)
                             ..+..|   .-.+.++.....|.+|. .|.|+.|++|++.........       ..+  ....+||+.++++
T Consensus       255 r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~S  334 (720)
T KOG0321|consen  255 RQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLLS  334 (720)
T ss_pred             ccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCcEEEEeccccCcCchhhccCcccceeeeeeecCCCCceEec
Confidence                   112223   23466777777777655 555999999999875432111       111  2288999999999


Q ss_pred             EccCCCCeEEEEeCCCcc-eeEEEeeccccEEEEEEcCC-CCEEEEEeCCCcEEEEecCCCC
Q psy14511        379 SHGKQDCSLKMWEYPRLH-LIEELKIHQERILSAVLSPD-QTCVAAASADETISIWNCFPRD  438 (488)
Q Consensus       379 ~~g~~~~~i~i~d~~~~~-~~~~~~~~~~~v~~~~~s~~-~~~l~t~~~dg~v~iw~~~~~~  438 (488)
                        |+.|...++|.+.+.+ ....+.+|.-.|++++|.|. -.-++|+++|..+++|++.++-
T Consensus       335 --gSsd~~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l~~~l  394 (720)
T KOG0321|consen  335 --GSSDEQAYIWVVSSPEAPPALLLGHTREVTTVRWLPSATTPVATCSDDFRVKIWRLSNGL  394 (720)
T ss_pred             --cCCCcceeeeeecCccCChhhhhCcceEEEEEeeccccCCCceeeccCcceEEEeccCch
Confidence              8999999999998865 45678899999999999984 3357778999999999997553

>KOG4328|consensus

Probab=99.92  E-value=1.7e-23  Score=176.21  Aligned_cols=285  Identities=15%  Similarity=0.197  Sum_probs=214.7

Q ss_pred             cccccccceeEEEEecCCC-eEEeeeCCcccceEEEEecCCCe----eeeeeecCCCccccccccccccccceeEEEEEe
Q psy14511         75 NNQCHLSAVKAIAWCPWEP-TLLATGGGICDQTVRLWNSMNGK----EKCHVKTDSQQANDETISYREQKKRRHLSFLLH  149 (488)
Q Consensus        75 ~~~~h~~~v~~l~~~~~~~-~l~~~~~~~~d~~i~vwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (488)
                      ...-|.++|++++|+|... .++++|..  -|+|-+||+.+.+    .+..+..++.++..+.|++..            
T Consensus       181 v~kv~~~Rit~l~fHPt~~~~lva~GdK--~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n------------  246 (498)
T KOG4328|consen  181 VAKVTDRRITSLAFHPTENRKLVAVGDK--GGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPAN------------  246 (498)
T ss_pred             eeEecccceEEEEecccCcceEEEEccC--CCcEEEEecCCCCCccCceEEeccCCccccceEecCCC------------
Confidence            3455889999999999877 78888875  8999999995322    122333344444444433322            


Q ss_pred             eeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCc
Q psy14511        150 GFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNK  229 (488)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~  229 (488)
                                                                                ..++++.+.||+|++-|++...
T Consensus       247 ----------------------------------------------------------~s~i~ssSyDGtiR~~D~~~~i  268 (498)
T KOG4328|consen  247 ----------------------------------------------------------TSQIYSSSYDGTIRLQDFEGNI  268 (498)
T ss_pred             ----------------------------------------------------------hhheeeeccCceeeeeeecchh
Confidence                                                                      4689999999999999999887


Q ss_pred             eEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCccee-eeeeccccccEEEEEec---CCEEEEeecCCe
Q psy14511        230 TQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERL-IQKLRTHMHQVIAMCWN---GNLLSCGTIGGN  305 (488)
Q Consensus       230 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~-~~~~~~~~~~v~~~~~~---~~~l~~~~~dg~  305 (488)
                      ...++.... ....+..+.|+.+...++++ ..-|...+||++++.. ...+.-|...|..++++   ..++++++.|++
T Consensus       269 ~e~v~s~~~-d~~~fs~~d~~~e~~~vl~~-~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T  346 (498)
T KOG4328|consen  269 SEEVLSLDT-DNIWFSSLDFSAESRSVLFG-DNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFLATASLDQT  346 (498)
T ss_pred             hHHHhhcCc-cceeeeeccccCCCccEEEe-ecccceEEEEeecCCccchhhhhhhcccceeecCCCCchheeecccCcc
Confidence            766666544 55677888999988888888 6777999999998654 66677788999999994   689999999999


Q ss_pred             EEEEECcCCCc---cceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECC----CCCCCc----------ccceeee
Q psy14511        306 ILHYDVRTHSD---YPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFR----QLDAKR----------PLGLIVP  367 (488)
Q Consensus       306 i~i~d~~~~~~---~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~----~~~~~~----------~~~~~~~  367 (488)
                      .+|||++.-..   +......|...|.++.|||++-.|++.+ |..|+|||..    ..+...          .+..+..
T Consensus       347 ~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~~I~Hn~~t~RwlT~fKA  426 (498)
T KOG4328|consen  347 AKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLGTIPHNNRTGRWLTPFKA  426 (498)
T ss_pred             eeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCceEEeecccccccCCccceeeccCcccccccchhh
Confidence            99999986432   2345667899999999999876677777 8999999984    222211          2222234


Q ss_pred             eecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccc-cEEE-EEEcCCCCEEEEEe-CCCcEEEEecC
Q psy14511        368 KLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQE-RILS-AVLSPDQTCVAAAS-ADETISIWNCF  435 (488)
Q Consensus       368 ~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~-~v~~-~~~s~~~~~l~t~~-~dg~v~iw~~~  435 (488)
                      .|.|+..++++  |..-..|-|+|-..++.+..+..... .|.+ ..|+|-+..+++|+ .-|.|+||--.
T Consensus       427 ~W~P~~~li~v--g~~~r~IDv~~~~~~q~v~el~~P~~~tI~~vn~~HP~~~~~~aG~~s~Gki~vft~k  495 (498)
T KOG4328|consen  427 AWDPDYNLIVV--GRYPRPIDVFDGNGGQMVCELHDPESSTIPSVNEFHPMRDTLAAGGNSSGKIYVFTNK  495 (498)
T ss_pred             eeCCCccEEEE--eccCcceeEEcCCCCEEeeeccCccccccccceeecccccceeccCCccceEEEEecC
Confidence            99999999999  78888899999998888888755443 4554 47999888555554 66888888644

>KOG0646|consensus

Probab=99.92  E-value=9.3e-24  Score=178.33  Aligned_cols=273  Identities=14%  Similarity=0.148  Sum_probs=196.2

Q ss_pred             CceEEEee-cCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccc
Q psy14511          5 GNLLSCGT-IGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSA   82 (488)
Q Consensus         5 g~~la~g~-~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~   82 (488)
                      +.+++++. ....+.+|.+....+.. ...--.++|.|++-+|+|.||+.|. .+.|++|.+.+|.   .+..+.+|-.+
T Consensus        50 ~~yllsaq~~rp~l~vw~i~k~~~~~-q~~v~Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~---LL~v~~aHYQ~  125 (476)
T KOG0646|consen   50 NEYLLSAQLKRPLLHVWEILKKDQVV-QYIVLPGPVHALASSNLGYFLLAGTISGNLYLWELSSGI---LLNVLSAHYQS  125 (476)
T ss_pred             hhheeeecccCccccccccCchhhhh-hhcccccceeeeecCCCceEEEeecccCcEEEEEecccc---HHHHHHhhccc
Confidence            45666554 44578899887665443 2333456899999999999999997 9999999999965   44456889999


Q ss_pred             eeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccc
Q psy14511         83 VKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQS  162 (488)
Q Consensus        83 v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (488)
                      |+++.|+.||.++++++.   ||.|.+|.+..--.  ....+              .               ..++..++
T Consensus       126 ITcL~fs~dgs~iiTgsk---Dg~V~vW~l~~lv~--a~~~~--------------~---------------~~p~~~f~  171 (476)
T KOG0646|consen  126 ITCLKFSDDGSHIITGSK---DGAVLVWLLTDLVS--ADNDH--------------S---------------VKPLHIFS  171 (476)
T ss_pred             eeEEEEeCCCcEEEecCC---CccEEEEEEEeecc--cccCC--------------C---------------ccceeeec
Confidence            999999999998887776   99999998743210  00000              0               00000000


Q ss_pred             cccccceeeecccccccccccCCCceeecCCCccccceeeeeee----CCCcEEEEECCCeEEEEECCCCceEEEEecCC
Q psy14511        163 KRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDW----GYHDTLAVALDTSVYTWNTKTNKTQLLVEYPT  238 (488)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~  238 (488)
                      .                                 +...+..+..    ...++++++.|.++++||+..+.....+.+  
T Consensus       172 ~---------------------------------HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~f--  216 (476)
T KOG0646|consen  172 D---------------------------------HTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTITF--  216 (476)
T ss_pred             c---------------------------------CcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEec--
Confidence            0                                 0001111111    135799999999999999999988887774  


Q ss_pred             CCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcc----------------eeeeeeccccc--cEEEEEe--cCCEEE
Q psy14511        239 YDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEE----------------RLIQKLRTHMH--QVIAMCW--NGNLLS  298 (488)
Q Consensus       239 ~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~----------------~~~~~~~~~~~--~v~~~~~--~~~~l~  298 (488)
                        +..+.+++.+|.++.+++| +.+|.|.+.++...                ..+..+.+|.+  +|+|++.  ||.+|+
T Consensus       217 --p~si~av~lDpae~~~yiG-t~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLl  293 (476)
T KOG0646|consen  217 --PSSIKAVALDPAERVVYIG-TEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLL  293 (476)
T ss_pred             --CCcceeEEEcccccEEEec-CCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCccEEE
Confidence              4589999999999999999 99999998876432                23455677887  8999888  899999


Q ss_pred             EeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEec--CeEEEEECC
Q psy14511        299 CGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN--NTVKIWDFR  354 (488)
Q Consensus       299 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d--~~i~iwd~~  354 (488)
                      +|+.||.+++||+... ++++.+....++|+.+.+.|-.+-...+..  ..+-.|++.
T Consensus       294 SGd~dg~VcvWdi~S~-Q~iRtl~~~kgpVtnL~i~~~~~~~~l~~~~~ps~~~~~lk  350 (476)
T KOG0646|consen  294 SGDEDGKVCVWDIYSK-QCIRTLQTSKGPVTNLQINPLERGIILFEHKQPSLPNPHLK  350 (476)
T ss_pred             eeCCCCCEEEEecchH-HHHHHHhhhccccceeEeeccccceecccccCccCCchHhh
Confidence            9999999999999884 567777767888999999775444433332  444444443

>KOG0650|consensus

Probab=99.92  E-value=2.1e-23  Score=181.47  Aligned_cols=322  Identities=20%  Similarity=0.295  Sum_probs=222.1

Q ss_pred             eeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCe-EEeeeCCcccceE
Q psy14511         30 TAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPT-LLATGGGICDQTV  107 (488)
Q Consensus        30 ~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~-l~~~~~~~~d~~i  107 (488)
                      ..+.||++.|.++...|.|.+||+|+ ||+|+||.+.++.+.+.+.    ..+.|.+++|+|.+.. +++++.   ...+
T Consensus       394 lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~----~d~~I~~vaw~P~~~~~vLAvA~---~~~~  466 (733)
T KOG0650|consen  394 LVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQ----FDSEIRSVAWNPLSDLCVLAVAV---GECV  466 (733)
T ss_pred             eeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEe----ecceeEEEEecCCCCceeEEEEe---cCce
Confidence            35689999999999999999999999 9999999999977655432    3468999999998764 333443   4456


Q ss_pred             EEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCc
Q psy14511        108 RLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPE  187 (488)
Q Consensus       108 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (488)
                      .+-+..-|..+..-....      .+...+....            +...+.......             .......  
T Consensus       467 ~ivnp~~G~~~e~~~t~e------ll~~~~~~~~------------p~~~~~~W~~~~-------------~~e~~~~--  513 (733)
T KOG0650|consen  467 LIVNPIFGDRLEVGPTKE------LLASAPNESE------------PDAAVVTWSRAS-------------LDELEKG--  513 (733)
T ss_pred             EEeCccccchhhhcchhh------hhhcCCCccC------------Ccccceeechhh-------------hhhhccc--
Confidence            666655442221111000      0000000000            000000000000             0000000  


Q ss_pred             eeecCCCccccceeeeeeeCC-CcEE-EEE---CCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCC
Q psy14511        188 RILEAPSIINDFYTSGLDWGY-HDTL-AVA---LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTC  262 (488)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~---~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~  262 (488)
                         ....+...-.+..+.|+. +.++ ++.   ....|.|.++.....+..+..   ..+.+.++.|+|...+|+++  .
T Consensus       514 ---v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQLSK~~sQ~PF~k---skG~vq~v~FHPs~p~lfVa--T  585 (733)
T KOG0650|consen  514 ---VCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQLSKRKSQSPFRK---SKGLVQRVKFHPSKPYLFVA--T  585 (733)
T ss_pred             ---eEEEEecCCccceeeeecCCceEEEeccCCCcceEEEEecccccccCchhh---cCCceeEEEecCCCceEEEE--e
Confidence               000111223345567754 3444 333   346899999988776654443   66789999999999999988  5


Q ss_pred             CCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEE
Q psy14511        263 TEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYL  340 (488)
Q Consensus       263 ~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l  340 (488)
                      ...|++||+.....+..+......+..++.  .|..|+.++.|+.+..+|+.-..++.+.+..|...+++++|++.-.++
T Consensus       586 q~~vRiYdL~kqelvKkL~tg~kwiS~msihp~GDnli~gs~d~k~~WfDldlsskPyk~lr~H~~avr~Va~H~ryPLf  665 (733)
T KOG0650|consen  586 QRSVRIYDLSKQELVKKLLTGSKWISSMSIHPNGDNLILGSYDKKMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYPLF  665 (733)
T ss_pred             ccceEEEehhHHHHHHHHhcCCeeeeeeeecCCCCeEEEecCCCeeEEEEcccCcchhHHhhhhhhhhhhhhhcccccee
Confidence            678999999998888888777788888888  589999999999999999998888999999999999999999999999


Q ss_pred             EEEec-CeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeC-CC--cceeEEEeecccc----EEEEE
Q psy14511        341 ASGSN-NTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEY-PR--LHLIEELKIHQER----ILSAV  412 (488)
Q Consensus       341 ~~~~d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~-~~--~~~~~~~~~~~~~----v~~~~  412 (488)
                      ++|+| |++.|+.-.-..                                 |+ ++  --++..+++|...    |.++.
T Consensus       666 as~sdDgtv~Vfhg~VY~---------------------------------Dl~qnpliVPlK~L~gH~~~~~~gVLd~~  712 (733)
T KOG0650|consen  666 ASGSDDGTVIVFHGMVYN---------------------------------DLLQNPLIVPLKRLRGHEKTNDLGVLDTI  712 (733)
T ss_pred             eeecCCCcEEEEeeeeeh---------------------------------hhhcCCceEeeeeccCceeecccceEeec
Confidence            99995 888888632110                                 01 11  1246778888665    99999


Q ss_pred             EcCCCCEEEEEeCCCcEEEE
Q psy14511        413 LSPDQTCVAAASADETISIW  432 (488)
Q Consensus       413 ~s~~~~~l~t~~~dg~v~iw  432 (488)
                      |+|...+|++++.||+|++|
T Consensus       713 wHP~qpWLfsAGAd~tirlf  732 (733)
T KOG0650|consen  713 WHPRQPWLFSAGADGTIRLF  732 (733)
T ss_pred             ccCCCceEEecCCCceEEee
Confidence            99999999999999999998

>KOG1274|consensus

Probab=99.92  E-value=1.3e-22  Score=185.45  Aligned_cols=268  Identities=15%  Similarity=0.234  Sum_probs=204.4

Q ss_pred             cccCceEEEEEEccCCcEEEEec-CCeEEEEecccc-CcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEE
Q psy14511         33 TREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQL-DAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLW  110 (488)
Q Consensus        33 ~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~-~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vw  110 (488)
                      ..|...-+.++|.|+|.+|.+++ |+.|++|+..+. +.+..+.   -+...|.+++-..  .+++++..   +++|.+|
T Consensus        10 yaht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~---~~g~~v~~ia~~s--~~f~~~s~---~~tv~~y   81 (933)
T KOG1274|consen   10 YAHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETID---ISGELVSSIACYS--NHFLTGSE---QNTVLRY   81 (933)
T ss_pred             hhccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhh---ccCceeEEEeecc--cceEEeec---cceEEEe
Confidence            47888899999999999999998 999999998765 3333221   1666777776543  35666665   8899988


Q ss_pred             ecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceee
Q psy14511        111 NSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERIL  190 (488)
Q Consensus       111 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (488)
                      .+.+++.-.                                                                       
T Consensus        82 ~fps~~~~~-----------------------------------------------------------------------   90 (933)
T KOG1274|consen   82 KFPSGEEDT-----------------------------------------------------------------------   90 (933)
T ss_pred             eCCCCCccc-----------------------------------------------------------------------
Confidence            887665210                                                                       


Q ss_pred             cCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEE
Q psy14511        191 EAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWH  270 (488)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d  270 (488)
                                                             .+..      ..-++++++|+-+|++++.| +.|-.|++.+
T Consensus        91 ---------------------------------------iL~R------ftlp~r~~~v~g~g~~iaag-sdD~~vK~~~  124 (933)
T KOG1274|consen   91 ---------------------------------------ILAR------FTLPIRDLAVSGSGKMIAAG-SDDTAVKLLN  124 (933)
T ss_pred             ---------------------------------------eeee------eeccceEEEEecCCcEEEee-cCceeEEEEe
Confidence                                                   1111      34478999999999999999 9999999999


Q ss_pred             CCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeec--------CCccEEEEEEccCC-cE
Q psy14511        271 EQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITR--------EGDVVCGLKWSPNG-RY  339 (488)
Q Consensus       271 ~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--------~~~~i~~~~~s~~~-~~  339 (488)
                      +.+......+++|..+|.++.+  ++++||+.+-||.|++||+.++. +...+.+        ....+..++|+|+| ++
T Consensus       125 ~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~-~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~l  203 (933)
T KOG1274|consen  125 LDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGI-LSKTLTGVDKDNEFILSRICTRLAWHPKGGTL  203 (933)
T ss_pred             ccccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccch-hhhhcccCCccccccccceeeeeeecCCCCeE
Confidence            9999999999999999999999  58999999999999999998753 2222211        14557889999995 45


Q ss_pred             EEEEecCeEEEEECCCCCCCccccee-------eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEE
Q psy14511        340 LASGSNNTVKIWDFRQLDAKRPLGLI-------VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAV  412 (488)
Q Consensus       340 l~~~~d~~i~iwd~~~~~~~~~~~~~-------~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~  412 (488)
                      ++.+.|+.|++|+....+....++.-       ...|+|.|+|||+  +..+|.|.|||.++.+.    ......|.+++
T Consensus       204 a~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAA--s~~~g~I~vWnv~t~~~----~~~~~~Vc~~a  277 (933)
T KOG1274|consen  204 AVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAA--STLDGQILVWNVDTHER----HEFKRAVCCEA  277 (933)
T ss_pred             EeeccCCeEEEEccCCceeheeecccccccceEEEEEcCCCcEEee--eccCCcEEEEecccchh----ccccceeEEEe
Confidence            55555899999999988655443321       2399999999999  89999999999988322    22346799999


Q ss_pred             EcCCCCEEEEEeCCCcEEEE
Q psy14511        413 LSPDQTCVAAASADETISIW  432 (488)
Q Consensus       413 ~s~~~~~l~t~~~dg~v~iw  432 (488)
                      |.|+.+.+-.-...|...+|
T Consensus       278 w~p~~n~it~~~~~g~~~~~  297 (933)
T KOG1274|consen  278 WKPNANAITLITALGTLGVS  297 (933)
T ss_pred             cCCCCCeeEEEeeccccccC
Confidence            99998876555555544444

>KOG0267|consensus

Probab=99.92  E-value=2.7e-25  Score=197.31  Aligned_cols=237  Identities=22%  Similarity=0.393  Sum_probs=202.4

Q ss_pred             CCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--c
Q psy14511        216 LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--N  293 (488)
Q Consensus       216 ~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~  293 (488)
                      ..-.+++|+.+....         |...+.++..-..++.+++| +.+..+.+|.......+..+.+|..+|-++.|  +
T Consensus        12 ~~t~Lr~~~~~~~~~---------hsaav~~lk~~~s~r~~~~G-g~~~k~~L~~i~kp~~i~S~~~hespIeSl~f~~~   81 (825)
T KOG0267|consen   12 RATKLRVWDTREFVA---------HSAAVGCLKIRKSSRSLVTG-GEDEKVNLWAIGKPNAITSLTGHESPIESLTFDTS   81 (825)
T ss_pred             eeeccccccchhhhh---------hhhhhceeeeeccceeeccC-CCceeeccccccCCchhheeeccCCcceeeecCcc
Confidence            455666777543221         67778888876677788888 99999999999888888889999999999999  5


Q ss_pred             CCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCccccee-----ee
Q psy14511        294 GNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLI-----VP  367 (488)
Q Consensus       294 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~-----~~  367 (488)
                      ..+|++|+.+|.|++||++.. ..++.+.+|...+.++.|+|-+.+.|.++ |..+++||.+...........     +.
T Consensus        82 E~LlaagsasgtiK~wDleeA-k~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l  160 (825)
T KOG0267|consen   82 ERLLAAGSASGTIKVWDLEEA-KIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDVL  160 (825)
T ss_pred             hhhhcccccCCceeeeehhhh-hhhhhhhccccCcceeeeccceEEeccccccccceehhhhccCceeeecCCcceeEEE
Confidence            789999999999999999975 57789999999999999999999999999 799999999966544444322     33


Q ss_pred             eecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccc-ccccc
Q psy14511        368 KLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKR-KARQV  446 (488)
Q Consensus       368 ~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~-~~~~~  446 (488)
                      .|+|+|++++.  |++|..++|||+..|+.+.++..|.+.+..+.|+|..-++++||.|++|++||+++-+.+. .....
T Consensus       161 ~lsP~Gr~v~~--g~ed~tvki~d~~agk~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletfe~I~s~~~~~  238 (825)
T KOG0267|consen  161 RLSPDGRWVAS--GGEDNTVKIWDLTAGKLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETFEVISSGKPET  238 (825)
T ss_pred             eecCCCceeec--cCCcceeeeecccccccccccccccccccccccCchhhhhccCCCCceeeeeccceeEEeeccCCcc
Confidence            99999999999  8889999999999999999999999999999999999999999999999999999887773 34457


Q ss_pred             CCcceEEeecCCCceEEEE
Q psy14511        447 GSGSSLEFAILKQPVSLTA  465 (488)
Q Consensus       447 ~~v~~~~~s~~~~~~~~~~  465 (488)
                      ..|.++.|.|+++.+....
T Consensus       239 ~~v~~~~fn~~~~~~~~G~  257 (825)
T KOG0267|consen  239 DGVRSLAFNPDGKIVLSGE  257 (825)
T ss_pred             CCceeeeecCCceeeecCc
Confidence            8899999999988875533

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.92  E-value=1.3e-21  Score=174.03  Aligned_cols=263  Identities=13%  Similarity=0.091  Sum_probs=188.1

Q ss_pred             EEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEE
Q psy14511        211 TLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAM  290 (488)
Q Consensus       211 ~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~  290 (488)
                      +++++.|+.+++||+.+++....+..   + ..+.+++|+|+++.++++++.++.|++||..+++....+..+.. +..+
T Consensus         4 ~~s~~~d~~v~~~d~~t~~~~~~~~~---~-~~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~   78 (300)
T TIGR03866         4 YVSNEKDNTISVIDTATLEVTRTFPV---G-QRPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPD-PELF   78 (300)
T ss_pred             EEEecCCCEEEEEECCCCceEEEEEC---C-CCCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCC-ccEE
Confidence            55667899999999999887766653   2 33678999999998765547899999999998887776655433 3455


Q ss_pred             Ee--cCCEEEE-eecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEec--CeEEEEECCCCCCCcccc--
Q psy14511        291 CW--NGNLLSC-GTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN--NTVKIWDFRQLDAKRPLG--  363 (488)
Q Consensus       291 ~~--~~~~l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d--~~i~iwd~~~~~~~~~~~--  363 (488)
                      .+  +++.+++ +..++.+++||+++.+ ....+.. ...+.+++|+|+|++++++.+  ..+.+||..+.+......  
T Consensus        79 ~~~~~g~~l~~~~~~~~~l~~~d~~~~~-~~~~~~~-~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~  156 (300)
T TIGR03866        79 ALHPNGKILYIANEDDNLVTVIDIETRK-VLAEIPV-GVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDNVLVD  156 (300)
T ss_pred             EECCCCCEEEEEcCCCCeEEEEECCCCe-EEeEeeC-CCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEEEEcC
Confidence            56  6676654 4568999999998753 3333332 234678999999999998884  467788987764322211  


Q ss_pred             --eeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeecc-----c--cEEEEEEcCCCCEEEE-EeCCCcEEEEe
Q psy14511        364 --LIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQ-----E--RILSAVLSPDQTCVAA-ASADETISIWN  433 (488)
Q Consensus       364 --~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~-----~--~v~~~~~s~~~~~l~t-~~~dg~v~iw~  433 (488)
                        .....|+|+++.+++. +..++.|++||+++++.+..+..+.     .  ....++|+|++++++. .+.++.+.+||
T Consensus       157 ~~~~~~~~s~dg~~l~~~-~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d  235 (300)
T TIGR03866       157 QRPRFAEFTADGKELWVS-SEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVD  235 (300)
T ss_pred             CCccEEEECCCCCEEEEE-cCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEE
Confidence              1123899999988764 4568999999999998877665331     1  2356899999998654 44567899999


Q ss_pred             cCCCCccccccccCCcceEEeecCCCceEEEEeeecccccceeeEEEEeecccc
Q psy14511        434 CFPRDKKRKARQVGSGSSLEFAILKQPVSLTALLRSRAVEKQQHAIAYTVFGEA  487 (488)
Q Consensus       434 ~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~  487 (488)
                      +.+++......+...+.++.|+|+++.+...      ...+..+.++..+.|+.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~------~~~~~~i~v~d~~~~~~  283 (300)
T TIGR03866       236 AKTYEVLDYLLVGQRVWQLAFTPDEKYLLTT------NGVSNDVSVIDVAALKV  283 (300)
T ss_pred             CCCCcEEEEEEeCCCcceEEECCCCCEEEEE------cCCCCeEEEEECCCCcE
Confidence            9988776555566789999999999976322      12344566666666553

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG0270|consensus

Probab=99.92  E-value=1.1e-22  Score=170.82  Aligned_cols=280  Identities=22%  Similarity=0.394  Sum_probs=193.3

Q ss_pred             CCceEEEeecCC---eEEEEEcccCcccceeecccCc----eEEEEEEcc-------CCcEEEEec-CCeEEEEeccccC
Q psy14511          4 NGNLLSCGTIGG---NILHYDVRTHSDYPTAITREGD----VVCGLKWSP-------NGRYLASGS-NNTVKIWDFRQLD   68 (488)
Q Consensus         4 dg~~la~g~~dg---~i~iwd~~~~~~~~~~~~~h~~----~V~~l~~sp-------~g~~las~~-d~~i~vwd~~~~~   68 (488)
                      +.++|+++-.+.   .+.+|=.+...  ...+..|.-    .-.|++|..       -|+|+|.|. |..|.|||+.-..
T Consensus       136 sDnlIl~ar~eddvs~LEvYVyn~~e--~nlYvHHD~ilpafPLC~ewld~~~~~~~~gNyvAiGtmdp~IeIWDLDI~d  213 (463)
T KOG0270|consen  136 SDNLILCARNEDDVSYLEVYVYNEEE--ENLYVHHDFILPAFPLCIEWLDHGSKSGGAGNYVAIGTMDPEIEIWDLDIVD  213 (463)
T ss_pred             CCcEEEEeeccCCceEEEEEEEcCCC--cceeEecceeccCcchhhhhhhcCCCCCCCcceEEEeccCceeEEecccccc
Confidence            455666664322   33344333322  123334432    224566643       378999999 9999999986422


Q ss_pred             cCCCccc------------------ccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCcccc
Q psy14511         69 AKRPQVN------------------NQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQAND  130 (488)
Q Consensus        69 ~~~~~~~------------------~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~  130 (488)
                      ...+...                  ..+|+..|.+|+|+..-+.++++|+.  |.+|++||+.+|++...+.        
T Consensus       214 ~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsa--D~TV~lWD~~~g~p~~s~~--------  283 (463)
T KOG0270|consen  214 AVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSA--DKTVKLWDVDTGKPKSSIT--------  283 (463)
T ss_pred             ccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCC--CceEEEEEcCCCCcceehh--------
Confidence            2222211                  23699999999999998899999986  9999999999888543322        


Q ss_pred             ccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCc
Q psy14511        131 ETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHD  210 (488)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (488)
                                                                                                      
T Consensus       284 --------------------------------------------------------------------------------  283 (463)
T KOG0270|consen  284 --------------------------------------------------------------------------------  283 (463)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEE
Q psy14511        211 TLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAM  290 (488)
Q Consensus       211 ~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~  290 (488)
                                               .   |...|.++.|+|....++..|+.|++|.+.|.+........-...+.|-.+
T Consensus       284 -------------------------~---~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g~VEkv  335 (463)
T KOG0270|consen  284 -------------------------H---HGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKFDGEVEKV  335 (463)
T ss_pred             -------------------------h---cCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEeccceEEE
Confidence                                     1   778899999999876555555999999999998533333222346778888


Q ss_pred             Ee---cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCc-EEEEEe-cCeEEEEECCCCCCCccccee
Q psy14511        291 CW---NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGR-YLASGS-NNTVKIWDFRQLDAKRPLGLI  365 (488)
Q Consensus       291 ~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~-d~~i~iwd~~~~~~~~~~~~~  365 (488)
                      .|   ....++++..||.++-+|+++...++..+..|.++|.++++++.-. ++++++ |+.+++|++....        
T Consensus       336 ~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~--------  407 (463)
T KOG0270|consen  336 AWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDS--------  407 (463)
T ss_pred             EecCCCceeEEEecCCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCC--------
Confidence            88   3578889999999999999999899999999999999999998654 566666 5888888876331        


Q ss_pred             eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCC-EEEEEeCCCcEEEEecCCCCcc
Q psy14511        366 VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQT-CVAAASADETISIWNCFPRDKK  440 (488)
Q Consensus       366 ~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~t~~~dg~v~iw~~~~~~~~  440 (488)
                                        .+.++.-++.           -+...|.++.|+-. .||.|+..+.++|||+.+....
T Consensus       408 ------------------~~~v~~~~~~-----------~~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~~~~~V  454 (463)
T KOG0270|consen  408 ------------------PKSVKEHSFK-----------LGRLHCFALDPDVAFTLAFGGEKAVLRVWDIFTNSPV  454 (463)
T ss_pred             ------------------Cccccccccc-----------ccceeecccCCCcceEEEecCccceEEEeecccChhH
Confidence                              1111111111           11245566666544 5677777788899998877655

>KOG0269|consensus

Probab=99.92  E-value=4.4e-24  Score=191.21  Aligned_cols=266  Identities=18%  Similarity=0.290  Sum_probs=198.7

Q ss_pred             eEEEEEEcc-CCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCC
Q psy14511         38 VVCGLKWSP-NGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNG  115 (488)
Q Consensus        38 ~V~~l~~sp-~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~  115 (488)
                      .+..+.|.. +.++||+++ .|.|.+||+......+.+..+..|+..++++.|++...+++.+|++  ||+|++||++..
T Consensus        89 S~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQ--Dg~vK~~DlR~~  166 (839)
T KOG0269|consen   89 SAADVKWGQLYSNLIATCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQ--DGTVKCWDLRSK  166 (839)
T ss_pred             ehhhcccccchhhhheeecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCC--CceEEEEeeecc
Confidence            456678875 678999998 9999999998644455666788899999999999999999999986  999999999988


Q ss_pred             eeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCc
Q psy14511        116 KEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSI  195 (488)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (488)
                      +...++.+.+..+..+.|++..                                                          
T Consensus       167 ~S~~t~~~nSESiRDV~fsp~~----------------------------------------------------------  188 (839)
T KOG0269|consen  167 KSKSTFRSNSESIRDVKFSPGY----------------------------------------------------------  188 (839)
T ss_pred             cccccccccchhhhceeeccCC----------------------------------------------------------
Confidence            8777777766666655555433                                                          


Q ss_pred             cccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcce
Q psy14511        196 INDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEER  275 (488)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~  275 (488)
                                  ++.++++...|.+++||++....- ..++.. |.+++.|+.|+|++.+||+| +.|+.|+|||+.+.+
T Consensus       189 ------------~~~F~s~~dsG~lqlWDlRqp~r~-~~k~~A-H~GpV~c~nwhPnr~~lATG-GRDK~vkiWd~t~~~  253 (839)
T KOG0269|consen  189 ------------GNKFASIHDSGYLQLWDLRQPDRC-EKKLTA-HNGPVLCLNWHPNREWLATG-GRDKMVKIWDMTDSR  253 (839)
T ss_pred             ------------CceEEEecCCceEEEeeccCchhH-HHHhhc-ccCceEEEeecCCCceeeec-CCCccEEEEeccCCC
Confidence                        356777779999999999865421 122222 99999999999999999999 899999999998654


Q ss_pred             eeeeec-cccccEEEEEe---cCCEEEEee--cCCeEEEEECcCCCccceeeecCCccEEEEEEcc-CCcEEEEEe-cCe
Q psy14511        276 LIQKLR-THMHQVIAMCW---NGNLLSCGT--IGGNILHYDVRTHSDYPTAITREGDVVCGLKWSP-NGRYLASGS-NNT  347 (488)
Q Consensus       276 ~~~~~~-~~~~~v~~~~~---~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~-d~~  347 (488)
                      .-.... ....++..+.|   ....|++++  .|-.|+|||++.+--+...+..|...++.++|.. |-..|.+++ |+.
T Consensus       254 ~~~~~tInTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP~~t~~eH~~~vt~i~W~~~d~~~l~s~sKD~t  333 (839)
T KOG0269|consen  254 AKPKHTINTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYIPYATFLEHTDSVTGIAWDSGDRINLWSCSKDGT  333 (839)
T ss_pred             ccceeEEeecceeeeeeeccCccchhhhhhccccceEEEEeeccccccceeeeccCccccceeccCCCceeeEeecCccH
Confidence            332222 23568899999   346677765  4778999999987778889999999999999976 445677777 677


Q ss_pred             EEEEECCCCCCCcccceee-eeecCCCCEEEE
Q psy14511        348 VKIWDFRQLDAKRPLGLIV-PKLKREGRELVT  378 (488)
Q Consensus       348 i~iwd~~~~~~~~~~~~~~-~~~~~~~~~l~~  378 (488)
                      +..-.+++......+.... ..+.+.|....+
T Consensus       334 v~qh~~knat~pid~a~~~~~s~g~~g~l~fa  365 (839)
T KOG0269|consen  334 VLQHLFKNATTPIDLANNGGLSVGQFGDLYFA  365 (839)
T ss_pred             HHHhhhhcccChhhhcCcccccccccCceeEE
Confidence            7665555543222221111 155555554444

>KOG1445|consensus

Probab=99.91  E-value=7.3e-23  Score=179.56  Aligned_cols=206  Identities=19%  Similarity=0.289  Sum_probs=151.9

Q ss_pred             eecccCceEEEEEEcc-CCcEEEEec-CCeEEEEeccccCcCCC---cccccccccceeEEEEecCCCeEEeeeCCcccc
Q psy14511         31 AITREGDVVCGLKWSP-NGRYLASGS-NNTVKIWDFRQLDAKRP---QVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQ  105 (488)
Q Consensus        31 ~~~~h~~~V~~l~~sp-~g~~las~~-d~~i~vwd~~~~~~~~~---~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~  105 (488)
                      .+.+|.+.|+.+.|+| +..+||+++ |..|+||.+..+-....   -..+.+..-.|.++.|+|....+++++.   -|
T Consensus        74 ~l~~H~d~VtDl~FspF~D~LLAT~S~D~~VKiW~lp~g~~q~LSape~~~g~~~~~vE~l~fHpTaDgil~s~a---~g  150 (1012)
T KOG1445|consen   74 ILAAHGDQVTDLGFSPFADELLATCSRDEPVKIWKLPRGHSQKLSAPEIDVGGGNVIVECLRFHPTADGILASGA---HG  150 (1012)
T ss_pred             eeecccceeeccCccccchhhhhcccCCCeeEEEecCCCcccccCCcceeecCCceEEEEeecccCcCceEEecc---Cc
Confidence            5679999999999999 566899999 99999999974332221   1123333457889999998888888887   89


Q ss_pred             eEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCC
Q psy14511        106 TVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAK  185 (488)
Q Consensus       106 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (488)
                      ++++||+.+++....+                                                                
T Consensus       151 ~v~i~D~stqk~~~el----------------------------------------------------------------  166 (1012)
T KOG1445|consen  151 SVYITDISTQKTAVEL----------------------------------------------------------------  166 (1012)
T ss_pred             eEEEEEcccCceeecc----------------------------------------------------------------
Confidence            9999999887643222                                                                


Q ss_pred             CceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCc
Q psy14511        186 PERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEY  265 (488)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~  265 (488)
                                                                         .+ |...|.+..|+.||..++++ +.|..
T Consensus       167 ---------------------------------------------------~~-h~d~vQSa~WseDG~llats-cKdkq  193 (1012)
T KOG1445|consen  167 ---------------------------------------------------SG-HTDKVQSADWSEDGKLLATS-CKDKQ  193 (1012)
T ss_pred             ---------------------------------------------------cC-CchhhhccccccCCceEeee-cCCcc
Confidence                                                               22 77788999999999999999 99999


Q ss_pred             EEEEECCc-ceeeeeecccccc-EEEEEecCC--EEEEeecC----CeEEEEECcCCCccceeeecC-CccEEEEEEccC
Q psy14511        266 IDLWHEQE-ERLIQKLRTHMHQ-VIAMCWNGN--LLSCGTIG----GNILHYDVRTHSDYPTAITRE-GDVVCGLKWSPN  336 (488)
Q Consensus       266 i~i~d~~~-~~~~~~~~~~~~~-v~~~~~~~~--~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~-~~~i~~~~~s~~  336 (488)
                      |+|||.+. ++.++..++|.+. -..+.|-|+  .|++.+.+    ..+++||.+.-..+...+.-. ...|.---|.||
T Consensus       194 irifDPRa~~~piQ~te~H~~~rdsRv~w~Gn~~rlisTGF~~~R~reV~~~Dtr~f~~p~~tleld~stGvLiPl~DpD  273 (1012)
T KOG1445|consen  194 IRIFDPRASMEPIQTTEGHGGMRDSRVLWAGNWERLISTGFTTKRIREVRAYDTRKFGAPVHTLELDSSTGVLIPLYDPD  273 (1012)
T ss_pred             eEEeCCccCCCccccccccccchhheeeeccchhhhhhcccchhhheeeeeeeccccCCcceeEEeecccceEeeeecCC
Confidence            99999876 5677777888654 245667443  55554443    579999998866665554432 234555678999


Q ss_pred             CcEEEEEec--CeEEEEECCCC
Q psy14511        337 GRYLASGSN--NTVKIWDFRQL  356 (488)
Q Consensus       337 ~~~l~~~~d--~~i~iwd~~~~  356 (488)
                      .++|..++.  .++..+.+...
T Consensus       274 t~llfLaGKG~~~l~~lE~~d~  295 (1012)
T KOG1445|consen  274 TRLLFLAGKGTNKLFMLEMQDR  295 (1012)
T ss_pred             CceEEEecCCcceEEEEEecCC
Confidence            998888773  77777776543

>KOG4378|consensus

Probab=99.91  E-value=1.6e-22  Score=172.23  Aligned_cols=212  Identities=15%  Similarity=0.221  Sum_probs=168.3

Q ss_pred             eEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceee
Q psy14511        244 ISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAI  321 (488)
Q Consensus       244 i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~  321 (488)
                      -.|++......+++++ +..+.|+|||++...+.+.+++|...|+++.+  .+.+|++++..|.|.+..+.++......-
T Consensus        82 ~~Cv~~~s~S~y~~sg-G~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~  160 (673)
T KOG4378|consen   82 AFCVACASQSLYEISG-GQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFT  160 (673)
T ss_pred             HHHHhhhhcceeeecc-CcCceeeehhhHHHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCcccccee
Confidence            3455555555788888 99999999999988888889999999999999  47899999999999999998865443333


Q ss_pred             ecCCccEEEEEEccCCcEEE-EEec-CeEEEEECCCCCCCccccee------eeeecCCCCEEEEEccCCCCeEEEEeCC
Q psy14511        322 TREGDVVCGLKWSPNGRYLA-SGSN-NTVKIWDFRQLDAKRPLGLI------VPKLKREGRELVTSHGKQDCSLKMWEYP  393 (488)
Q Consensus       322 ~~~~~~i~~~~~s~~~~~l~-~~~d-~~i~iwd~~~~~~~~~~~~~------~~~~~~~~~~l~~~~g~~~~~i~i~d~~  393 (488)
                      ......|.-+.|+|..+++. +++| |.|.+||+............      -.+|+|....|++. -+.|..|.+||..
T Consensus       161 ~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vs-VG~Dkki~~yD~~  239 (673)
T KOG4378|consen  161 IDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVS-VGYDKKINIYDIR  239 (673)
T ss_pred             cCCCCeEEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEE-ecccceEEEeecc
Confidence            34455677899999887665 4556 99999999876432222111      11999998887776 5679999999998


Q ss_pred             CcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcc--ccccccCCcceEEeecCC
Q psy14511        394 RLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKK--RKARQVGSGSSLEFAILK  458 (488)
Q Consensus       394 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~--~~~~~~~~v~~~~~s~~~  458 (488)
                      ..+....+. ...+...++|+++|.+|+.|...|.|..||+...+..  ....|...|++++|.|..
T Consensus       240 s~~s~~~l~-y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~Pv~v~sah~~sVt~vafq~s~  305 (673)
T KOG4378|consen  240 SQASTDRLT-YSHPLSTVAFSECGTYLCAGNSKGELIAYDMRSTKAPVAVRSAHDASVTRVAFQPSP  305 (673)
T ss_pred             cccccceee-ecCCcceeeecCCceEEEeecCCceEEEEecccCCCCceEeeecccceeEEEeeecc
Confidence            777666665 4568899999999999999999999999999865543  456788899999999865

>KOG1538|consensus

Probab=99.91  E-value=1.5e-21  Score=172.51  Aligned_cols=262  Identities=18%  Similarity=0.304  Sum_probs=191.5

Q ss_pred             ccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccc
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHL   80 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~   80 (488)
                      .+||..|+.+. +..+.|||++.+.. .+.+.+|.+.|.|++|+.||+.+|+|+ |..|.+|.-.-    .-+. -..|.
T Consensus        21 kPDGsqL~lAA-g~rlliyD~ndG~l-lqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~kl----EG~L-kYSH~   93 (1081)
T KOG1538|consen   21 KPDGTQLILAA-GSRLLVYDTSDGTL-LQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKL----EGIL-KYSHN   93 (1081)
T ss_pred             CCCCceEEEec-CCEEEEEeCCCccc-ccccccccceEEEEEEccCCceeccCCCceeEEEecccc----ccee-eeccC
Confidence            35888888765 56899999999984 478999999999999999999999998 99999998542    1111 23499


Q ss_pred             cceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceec
Q psy14511         81 SAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLN  160 (488)
Q Consensus        81 ~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (488)
                      ..|.|+.|+|-...|++++    =...-+|..+...... .                                       
T Consensus        94 D~IQCMsFNP~~h~LasCs----LsdFglWS~~qK~V~K-~---------------------------------------  129 (1081)
T KOG1538|consen   94 DAIQCMSFNPITHQLASCS----LSDFGLWSPEQKSVSK-H---------------------------------------  129 (1081)
T ss_pred             CeeeEeecCchHHHhhhcc----hhhccccChhhhhHHh-h---------------------------------------
Confidence            9999999999987766655    4466788765432110 0                                       


Q ss_pred             cccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCC-CcEEEEE-CCCeEEEEECCCCceEEEEecCC
Q psy14511        161 QSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGY-HDTLAVA-LDTSVYTWNTKTNKTQLLVEYPT  238 (488)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~d~~v~iw~~~~~~~~~~~~~~~  238 (488)
                                                         .....+.+++|.. +++++.+ .+|+|.+-+-. ++....+.-++
T Consensus       130 -----------------------------------kss~R~~~CsWtnDGqylalG~~nGTIsiRNk~-gEek~~I~Rpg  173 (1081)
T KOG1538|consen  130 -----------------------------------KSSSRIICCSWTNDGQYLALGMFNGTISIRNKN-GEEKVKIERPG  173 (1081)
T ss_pred             -----------------------------------hhheeEEEeeecCCCcEEEEeccCceEEeecCC-CCcceEEeCCC
Confidence                                               0012234456643 5555555 89999998654 44444555555


Q ss_pred             CCCCceEEEEEcCCC-----CeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEEC
Q psy14511        239 YDNAYISCVAWKPRT-----TDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDV  311 (488)
Q Consensus       239 ~~~~~i~~~~~~~~~-----~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~  311 (488)
                      ..+.+|.+++|+|..     ..+++. ....++..|.+.. +.+..-+.-.-...|+++  +|.+++.|+.|+.+.+|.-
T Consensus       174 g~Nspiwsi~~~p~sg~G~~di~aV~-DW~qTLSFy~LsG-~~Igk~r~L~FdP~CisYf~NGEy~LiGGsdk~L~~fTR  251 (1081)
T KOG1538|consen  174 GSNSPIWSICWNPSSGEGRNDILAVA-DWGQTLSFYQLSG-KQIGKDRALNFDPCCISYFTNGEYILLGGSDKQLSLFTR  251 (1081)
T ss_pred             CCCCCceEEEecCCCCCCccceEEEE-eccceeEEEEecc-eeecccccCCCCchhheeccCCcEEEEccCCCceEEEee
Confidence            589999999999974     356666 7777777777654 444433333334456666  8999999999999999976


Q ss_pred             cCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECC
Q psy14511        312 RTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFR  354 (488)
Q Consensus       312 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~  354 (488)
                      +.  ..+-+.......|+.++..|++++++.|+ ||+|-.|++.
T Consensus       252 ~G--vrLGTvg~~D~WIWtV~~~PNsQ~v~~GCqDGTiACyNl~  293 (1081)
T KOG1538|consen  252 DG--VRLGTVGEQDSWIWTVQAKPNSQYVVVGCQDGTIACYNLI  293 (1081)
T ss_pred             cC--eEEeeccccceeEEEEEEccCCceEEEEEccCeeehhhhH
Confidence            53  34455556778899999999999999999 7999999875

>KOG2055|consensus

Probab=99.91  E-value=1.7e-22  Score=170.47  Aligned_cols=266  Identities=11%  Similarity=0.183  Sum_probs=206.0

Q ss_pred             CCceEEEeecCCeEEEEEcccCcc-cceeecccCceEEEEEEccCCc-EEEEec-CCeEEEEeccccCcCCCcccccccc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSD-YPTAITREGDVVCGLKWSPNGR-YLASGS-NNTVKIWDFRQLDAKRPQVNNQCHL   80 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~-~~~~~~~h~~~V~~l~~sp~g~-~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~   80 (488)
                      .-.+|++++.||+++||.+..... ..+.+.-...+|.+.+|.|+|. .+++++ ...++.||+.+.+.. .+..+.++.
T Consensus       224 ~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~~-k~~~~~g~e  302 (514)
T KOG2055|consen  224 TAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKVT-KLKPPYGVE  302 (514)
T ss_pred             CCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeeccccccc-cccCCCCcc
Confidence            456889999999999999875442 2233444567999999999999 777887 899999999886533 444455554


Q ss_pred             -cceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeecccccee
Q psy14511         81 -SAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVL  159 (488)
Q Consensus        81 -~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (488)
                       ..+.....++++++++..|.   .|.|.+....+++.+..+                                      
T Consensus       303 ~~~~e~FeVShd~~fia~~G~---~G~I~lLhakT~eli~s~--------------------------------------  341 (514)
T KOG2055|consen  303 EKSMERFEVSHDSNFIAIAGN---NGHIHLLHAKTKELITSF--------------------------------------  341 (514)
T ss_pred             cchhheeEecCCCCeEEEccc---CceEEeehhhhhhhhhee--------------------------------------
Confidence             45777888999998888887   888888887666643322                                      


Q ss_pred             ccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCC
Q psy14511        160 NQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTY  239 (488)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~  239 (488)
                                                                                                 .    
T Consensus       342 ---------------------------------------------------------------------------K----  342 (514)
T KOG2055|consen  342 ---------------------------------------------------------------------------K----  342 (514)
T ss_pred             ---------------------------------------------------------------------------e----
Confidence                                                                                       2    


Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccc---cccEEEEEecCCEEEEeecCCeEEEEECcC---
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTH---MHQVIAMCWNGNLLSCGTIGGNILHYDVRT---  313 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~---~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~---  313 (488)
                      ..+.+..++|+.+++.|+++ +.+|.|.+||++...+++++...   .+.-.|++.++.++|+|+..|.|.|||.++   
T Consensus       343 ieG~v~~~~fsSdsk~l~~~-~~~GeV~v~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~  421 (514)
T KOG2055|consen  343 IEGVVSDFTFSSDSKELLAS-GGTGEVYVWNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFA  421 (514)
T ss_pred             eccEEeeEEEecCCcEEEEE-cCCceEEEEecCCcceEEEEeecCccceeeeeecCCCceEEeccCcceEEEeccchhhc
Confidence            34578899999999999998 89999999999999888888542   123344445899999999999999999654   


Q ss_pred             --CCccceeeecCCccEEEEEEccCCcEEEEEec---CeEEEEECCCCCCCccccee--------eeeecCCCCEEEEEc
Q psy14511        314 --HSDYPTAITREGDVVCGLKWSPNGRYLASGSN---NTVKIWDFRQLDAKRPLGLI--------VPKLKREGRELVTSH  380 (488)
Q Consensus       314 --~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d---~~i~iwd~~~~~~~~~~~~~--------~~~~~~~~~~l~~~~  380 (488)
                        ..+++..+..-...|++++|+||++.||.++.   ..+++-.+.+......+...        ..+|||.+.++++  
T Consensus       422 s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~sG~lAv--  499 (514)
T KOG2055|consen  422 STNPKPIKTVDNLTTAITSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPNSGYLAV--  499 (514)
T ss_pred             cCCCCchhhhhhhheeeeeeeeCcchhhhhhhhhccccceEEEeccceeeeccCCCCCCcccceEEEEecCCCceEEe--
Confidence              22456666677778999999999999999983   88999888766443322222        2299999999999  


Q ss_pred             cCCCCeEEEEeCC
Q psy14511        381 GKQDCSLKMWEYP  393 (488)
Q Consensus       381 g~~~~~i~i~d~~  393 (488)
                      |...|.+.+|.+.
T Consensus       500 GNe~grv~l~kL~  512 (514)
T KOG2055|consen  500 GNEAGRVHLFKLH  512 (514)
T ss_pred             ecCCCceeeEeec
Confidence            8999999999864

>KOG0267|consensus

Probab=99.91  E-value=2.5e-24  Score=191.25  Aligned_cols=251  Identities=19%  Similarity=0.329  Sum_probs=200.6

Q ss_pred             eEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeE
Q psy14511          7 LLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKA   85 (488)
Q Consensus         7 ~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~   85 (488)
                      +++.+..+-.+++||...       +..|...|.|+..-..++.+++|+ |..+-+|.+..   ...+..+.+|..+|.+
T Consensus         6 ~~m~~~~~t~Lr~~~~~~-------~~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~k---p~~i~S~~~hespIeS   75 (825)
T KOG0267|consen    6 FLMKTKRATKLRVWDTRE-------FVAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGK---PNAITSLTGHESPIES   75 (825)
T ss_pred             ccceeeeeeccccccchh-------hhhhhhhhceeeeeccceeeccCCCceeeccccccC---CchhheeeccCCccee
Confidence            344445555677777532       346888899999877899999999 88899999865   4455568899999999


Q ss_pred             EEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecccccc
Q psy14511         86 IAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRT  165 (488)
Q Consensus        86 l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (488)
                      +.|+++.. |+++|..  +|+|++||++.++.++.+.+                                          
T Consensus        76 l~f~~~E~-Llaagsa--sgtiK~wDleeAk~vrtLtg------------------------------------------  110 (825)
T KOG0267|consen   76 LTFDTSER-LLAAGSA--SGTIKVWDLEEAKIVRTLTG------------------------------------------  110 (825)
T ss_pred             eecCcchh-hhccccc--CCceeeeehhhhhhhhhhhc------------------------------------------
Confidence            99999875 5666654  99999999987765443322                                          


Q ss_pred             ccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceE
Q psy14511        166 VSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYIS  245 (488)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~  245 (488)
                                                                                                |...+.
T Consensus       111 --------------------------------------------------------------------------h~~~~~  116 (825)
T KOG0267|consen  111 --------------------------------------------------------------------------HLLNIT  116 (825)
T ss_pred             --------------------------------------------------------------------------cccCcc
Confidence                                                                                      667788


Q ss_pred             EEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeec
Q psy14511        246 CVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITR  323 (488)
Q Consensus       246 ~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~  323 (488)
                      .+.|+|.+.+.+.+ +.|..+++||.+...+...+.+|...+..+.+  +|++++.+++|..+++||+..+ .....+..
T Consensus       117 sv~f~P~~~~~a~g-Stdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~ag-k~~~ef~~  194 (825)
T KOG0267|consen  117 SVDFHPYGEFFASG-STDTDLKIWDIRKKGCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAG-KLSKEFKS  194 (825)
T ss_pred             eeeeccceEEeccc-cccccceehhhhccCceeeecCCcceeEEEeecCCCceeeccCCcceeeeeccccc-cccccccc
Confidence            99999999999777 99999999999988999999999998888888  8999999999999999999886 57888899


Q ss_pred             CCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEe
Q psy14511        324 EGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELK  402 (488)
Q Consensus       324 ~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~  402 (488)
                      |...+..+.|+|..-+++.|+ |+++++||++                                       +.+.+....
T Consensus       195 ~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dle---------------------------------------tfe~I~s~~  235 (825)
T KOG0267|consen  195 HEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLE---------------------------------------TFEVISSGK  235 (825)
T ss_pred             ccccccccccCchhhhhccCCCCceeeeeccc---------------------------------------eeEEeeccC
Confidence            999999999999887777765 4555555554                                       444454444


Q ss_pred             eccccEEEEEEcCCCCEEEEEeCCC
Q psy14511        403 IHQERILSAVLSPDQTCVAAASADE  427 (488)
Q Consensus       403 ~~~~~v~~~~~s~~~~~l~t~~~dg  427 (488)
                      .....|.+.+|+|+++.+++|..+.
T Consensus       236 ~~~~~v~~~~fn~~~~~~~~G~q~s  260 (825)
T KOG0267|consen  236 PETDGVRSLAFNPDGKIVLSGEQIS  260 (825)
T ss_pred             CccCCceeeeecCCceeeecCchhh
Confidence            4567799999999999888887653

>KOG0302|consensus

Probab=99.91  E-value=2.9e-22  Score=164.78  Aligned_cols=264  Identities=17%  Similarity=0.362  Sum_probs=179.7

Q ss_pred             ecccCceEEEEEEccCCcEEEEe--c-CCeEEEEeccc-------------cCcCCCcccccccccceeEEEEecCCCeE
Q psy14511         32 ITREGDVVCGLKWSPNGRYLASG--S-NNTVKIWDFRQ-------------LDAKRPQVNNQCHLSAVKAIAWCPWEPTL   95 (488)
Q Consensus        32 ~~~h~~~V~~l~~sp~g~~las~--~-d~~i~vwd~~~-------------~~~~~~~~~~~~h~~~v~~l~~~~~~~~l   95 (488)
                      ..+|.+.++.+.-++-++-.+++  + .|.|+||++..             ....+++.++.+|.+.=..|+|||-..-.
T Consensus       147 ~i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~  226 (440)
T KOG0302|consen  147 SIPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGR  226 (440)
T ss_pred             ccccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecccccccc
Confidence            45788889999998876644444  4 79999999853             12345677778888888888888833222


Q ss_pred             EeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeeccc
Q psy14511         96 LATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTL  175 (488)
Q Consensus        96 ~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (488)
                      +.+|.  .-+.|++|...+|.-.                                                         
T Consensus       227 LlsGD--c~~~I~lw~~~~g~W~---------------------------------------------------------  247 (440)
T KOG0302|consen  227 LLSGD--CVKGIHLWEPSTGSWK---------------------------------------------------------  247 (440)
T ss_pred             cccCc--cccceEeeeeccCcee---------------------------------------------------------
Confidence            33332  2567788877665421                                                         


Q ss_pred             ccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCe
Q psy14511        176 GKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTD  255 (488)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  255 (488)
                                                                       +      ....+.+ |...|-.++|+|..+.
T Consensus       248 -------------------------------------------------v------d~~Pf~g-H~~SVEDLqWSptE~~  271 (440)
T KOG0302|consen  248 -------------------------------------------------V------DQRPFTG-HTKSVEDLQWSPTEDG  271 (440)
T ss_pred             -------------------------------------------------e------cCccccc-cccchhhhccCCccCc
Confidence                                                             0      0112233 8889999999998877


Q ss_pred             EEEEeCCCCcEEEEECCcc---eeeeeeccccccEEEEEec--CCEEEEeecCCeEEEEECcCCC--ccceeeecCCccE
Q psy14511        256 LAVTNTCTEYIDLWHEQEE---RLIQKLRTHMHQVIAMCWN--GNLLSCGTIGGNILHYDVRTHS--DYPTAITREGDVV  328 (488)
Q Consensus       256 l~~~~~~~~~i~i~d~~~~---~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~~i  328 (488)
                      ++++|+.||+|+|||++.+   .++.+ +.|...|+.++|+  -.+|++|+.||.++|||+++-+  .++..+..|..+|
T Consensus       272 vfaScS~DgsIrIWDiRs~~~~~~~~~-kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pI  350 (440)
T KOG0302|consen  272 VFASCSCDGSIRIWDIRSGPKKAAVST-KAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPI  350 (440)
T ss_pred             eEEeeecCceEEEEEecCCCccceeEe-eccCCceeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCe
Confidence            7766699999999999987   23333 7899999999994  3589999999999999998643  5788899999999


Q ss_pred             EEEEEccCC-cEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccc
Q psy14511        329 CGLKWSPNG-RYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQE  406 (488)
Q Consensus       329 ~~~~~s~~~-~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~  406 (488)
                      +++.|+|.. ..|++++ |..|.+||+............                ...+   +-|+. .+++..-++ ..
T Consensus       351 tsieW~p~e~s~iaasg~D~QitiWDlsvE~D~ee~~~~----------------a~~~---L~dlP-pQLLFVHqG-Qk  409 (440)
T KOG0302|consen  351 TSIEWHPHEDSVIAASGEDNQITIWDLSVEADEEEIDQE----------------AAEG---LQDLP-PQLLFVHQG-QK  409 (440)
T ss_pred             eEEEeccccCceEEeccCCCcEEEEEeeccCChhhhccc----------------cccc---hhcCC-ceeEEEecc-hh
Confidence            999999954 3444444 799999999744211100000                0011   11222 122222222 34


Q ss_pred             cEEEEEEcCC-CCEEEEEeCCCcEEEEe
Q psy14511        407 RILSAVLSPD-QTCVAAASADETISIWN  433 (488)
Q Consensus       407 ~v~~~~~s~~-~~~l~t~~~dg~v~iw~  433 (488)
                      .+..+.|++. ..+|++.+.|| +.||.
T Consensus       410 e~KevhWH~QiPG~lvsTa~dG-fnVfk  436 (440)
T KOG0302|consen  410 EVKEVHWHRQIPGLLVSTAIDG-FNVFK  436 (440)
T ss_pred             HhhhheeccCCCCeEEEecccc-eeEEE
Confidence            6888999996 44788888888 45553

>KOG4378|consensus

Probab=99.90  E-value=1.2e-21  Score=167.07  Aligned_cols=175  Identities=15%  Similarity=0.199  Sum_probs=144.7

Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccc-cEEEEEe---cCCEEEEeecCCeEEEEECcCCC
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMH-QVIAMCW---NGNLLSCGTIGGNILHYDVRTHS  315 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~-~v~~~~~---~~~~l~~~~~dg~i~i~d~~~~~  315 (488)
                      |...|+++.++-...+|+++ +..|.|.|..+.++.....+....+ .|.-+.+   ...+|.+++.+|.|.+||.....
T Consensus       120 h~stvt~v~YN~~DeyiAsv-s~gGdiiih~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~s  198 (673)
T KOG4378|consen  120 HQSTVTYVDYNNTDEYIASV-SDGGDIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMS  198 (673)
T ss_pred             CcceeEEEEecCCcceeEEe-ccCCcEEEEecccCccccceecCCCCeEEEeecccccceeeEeeccCCeEEEEeccCCC
Confidence            77889999999999999999 9999999999999877777764434 4446666   34678889999999999999877


Q ss_pred             ccceeeecCCccEEEEEEccCCc-EEEEEe-cCeEEEEECCCCCCCcccceee----eeecCCCCEEEEEccCCCCeEEE
Q psy14511        316 DYPTAITREGDVVCGLKWSPNGR-YLASGS-NNTVKIWDFRQLDAKRPLGLIV----PKLKREGRELVTSHGKQDCSLKM  389 (488)
Q Consensus       316 ~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~-d~~i~iwd~~~~~~~~~~~~~~----~~~~~~~~~l~~~~g~~~~~i~i  389 (488)
                      ........|..+...++|+|... +|++.+ |..|.+||.........+....    .+|+++|.+|++  |...|.|..
T Consensus       199 p~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l~y~~Plstvaf~~~G~~L~a--G~s~G~~i~  276 (673)
T KOG4378|consen  199 PIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRLTYSHPLSTVAFSECGTYLCA--GNSKGELIA  276 (673)
T ss_pred             cccchhhhccCCcCcceecCCccceEEEecccceEEEeecccccccceeeecCCcceeeecCCceEEEe--ecCCceEEE
Confidence            67777889999999999999764 566666 8999999998764444333222    299999999999  999999999


Q ss_pred             EeCCC-cceeEEEeeccccEEEEEEcCCC
Q psy14511        390 WEYPR-LHLIEELKIHQERILSAVLSPDQ  417 (488)
Q Consensus       390 ~d~~~-~~~~~~~~~~~~~v~~~~~s~~~  417 (488)
                      ||++. ..++..+..|...|++++|-|..
T Consensus       277 YD~R~~k~Pv~v~sah~~sVt~vafq~s~  305 (673)
T KOG4378|consen  277 YDMRSTKAPVAVRSAHDASVTRVAFQPSP  305 (673)
T ss_pred             EecccCCCCceEeeecccceeEEEeeecc
Confidence            99975 46889999999999999998764

>KOG2919|consensus

Probab=99.90  E-value=9e-22  Score=158.77  Aligned_cols=212  Identities=17%  Similarity=0.262  Sum_probs=167.8

Q ss_pred             CcEEEEECCCeEEEEECCCCceEEEEecCCCCCC---ceEEEEEcCCCCeEEEEeCCCCcEEEEEC-Ccceeeeee----
Q psy14511        209 HDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNA---YISCVAWKPRTTDLAVTNTCTEYIDLWHE-QEERLIQKL----  280 (488)
Q Consensus       209 ~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~---~i~~~~~~~~~~~l~~~~~~~~~i~i~d~-~~~~~~~~~----  280 (488)
                      +.+++.+.+.-|.+||.-+|+....+.... |..   ...+++|+|||.+|+++  ....|++||+ +.++....+    
T Consensus       124 ~l~a~ssr~~PIh~wdaftG~lraSy~~yd-h~de~taAhsL~Fs~DGeqlfaG--ykrcirvFdt~RpGr~c~vy~t~~  200 (406)
T KOG2919|consen  124 NLFAVSSRDQPIHLWDAFTGKLRASYRAYD-HQDEYTAAHSLQFSPDGEQLFAG--YKRCIRVFDTSRPGRDCPVYTTVT  200 (406)
T ss_pred             ceeeeccccCceeeeeccccccccchhhhh-hHHhhhhheeEEecCCCCeEeec--ccceEEEeeccCCCCCCcchhhhh
Confidence            445566699999999999999877665543 333   34689999999999987  7889999998 444322221    


Q ss_pred             ---ccccccEEEEEe---cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe--cCeEEEEE
Q psy14511        281 ---RTHMHQVIAMCW---NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWD  352 (488)
Q Consensus       281 ---~~~~~~v~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--d~~i~iwd  352 (488)
                         .+..+-+.++++   +...++.|+....+-||.-... .++..+.+|.+.|+.++|.++|+.|.+|+  +..|..||
T Consensus       201 ~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~-~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WD  279 (406)
T KOG2919|consen  201 KGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGR-RPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWD  279 (406)
T ss_pred             cccccccceeeeeeccCCCCcceeeecccceeeeEecCCC-CceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEe
Confidence               123556777888   5679999999999888887764 57888889999999999999999999999  49999999


Q ss_pred             CCCCCCC-ccc--------ceeeeeecCCCCEEEEEccCCCCeEEEEeCCC-cceeEEEeeccccEEEEEEcCCCCEEEE
Q psy14511        353 FRQLDAK-RPL--------GLIVPKLKREGRELVTSHGKQDCSLKMWEYPR-LHLIEELKIHQERILSAVLSPDQTCVAA  422 (488)
Q Consensus       353 ~~~~~~~-~~~--------~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~t  422 (488)
                      ++..... -.+        +.+.-...|+++.|++  |+.+|.|++||+++ +..+..+..|+..++.++++|-=..+||
T Consensus       280 iR~~~~pv~~L~rhv~~TNQRI~FDld~~~~~Las--G~tdG~V~vwdlk~~gn~~sv~~~~sd~vNgvslnP~mpilat  357 (406)
T KOG2919|consen  280 IRYSRDPVYALERHVGDTNQRILFDLDPKGEILAS--GDTDGSVRVWDLKDLGNEVSVTGNYSDTVNGVSLNPIMPILAT  357 (406)
T ss_pred             ehhccchhhhhhhhccCccceEEEecCCCCceeec--cCCCccEEEEecCCCCCcccccccccccccceecCcccceeee
Confidence            9865321 111        1222267899999999  99999999999998 7778888889999999999999888888


Q ss_pred             EeCC
Q psy14511        423 ASAD  426 (488)
Q Consensus       423 ~~~d  426 (488)
                      ++..
T Consensus       358 ssGq  361 (406)
T KOG2919|consen  358 SSGQ  361 (406)
T ss_pred             ccCc
Confidence            8755

>KOG1963|consensus

Probab=99.90  E-value=7.2e-20  Score=167.18  Aligned_cols=302  Identities=13%  Similarity=0.157  Sum_probs=191.7

Q ss_pred             ecccCceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCcccccccccceeEEEEecCCC---eEEeeeCCcccceEE
Q psy14511         32 ITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEP---TLLATGGGICDQTVR  108 (488)
Q Consensus        32 ~~~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~---~l~~~~~~~~d~~i~  108 (488)
                      +.+-...-..-.||+|+++++...+..|.||...++++.   ..+.+|..+++.+.+.|...   +++++..   ||.|+
T Consensus        12 lgg~n~~~~~avfSnD~k~l~~~~~~~V~VyS~~Tg~~i---~~l~~~~a~l~s~~~~~~~~~~~~~~~~sl---~G~I~   85 (792)
T KOG1963|consen   12 LGGRNGNKSPAVFSNDAKFLFLCTGNFVKVYSTATGECI---TSLEDHTAPLTSVIVLPSSENANYLIVCSL---DGTIR   85 (792)
T ss_pred             eccccceecccccccCCcEEEEeeCCEEEEEecchHhhh---hhcccccCccceeeecCCCccceEEEEEec---CccEE
Confidence            333333334457999999999999999999999996644   46888999999999988765   3444444   99999


Q ss_pred             EEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCce
Q psy14511        109 LWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPER  188 (488)
Q Consensus       109 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (488)
                      +||...+..+..+........... .+...+.......  ..   ++...+.............    ............
T Consensus        86 vwd~~~~~Llkt~~~~~~v~~~~~-~~~~a~~s~~~~~--s~---~~~~~~~~~s~~~~~q~~~----~~~~t~~~~~~d  155 (792)
T KOG1963|consen   86 VWDWSDGELLKTFDNNLPVHALVY-KPAQADISANVYV--SV---EDYSILTTFSKKLSKQSSR----FVLATFDSAKGD  155 (792)
T ss_pred             EecCCCcEEEEEEecCCceeEEEe-chhHhCccceeEe--ec---ccceeeeecccccccceee----eEeeeccccchh
Confidence            999999999888876533221111 0100000000000  00   0000000000000000000    000000000000


Q ss_pred             eecCCCccccceeeeeeeC-CCcEEEEECCCeEEEEECCCCceEEEE--ecCCCCCCceEEEEEcCCCCeEEEEeCCCCc
Q psy14511        189 ILEAPSIINDFYTSGLDWG-YHDTLAVALDTSVYTWNTKTNKTQLLV--EYPTYDNAYISCVAWKPRTTDLAVTNTCTEY  265 (488)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~v~iw~~~~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~  265 (488)
                      +....     .....+... .+.+.....+..+.+|...+.. ....  .....|...+++.+++|.+++++++ ..||.
T Consensus       156 ~~~~~-----~~~~~I~~~~~ge~~~i~~~~~~~~~~v~~~~-~~~~~~~~~~~Htf~~t~~~~spn~~~~Aa~-d~dGr  228 (792)
T KOG1963|consen  156 FLKEH-----QEPKSIVDNNSGEFKGIVHMCKIHIYFVPKHT-KHTSSRDITVHHTFNITCVALSPNERYLAAG-DSDGR  228 (792)
T ss_pred             hhhhh-----cCCccEEEcCCceEEEEEEeeeEEEEEecccc-eeeccchhhhhhcccceeEEeccccceEEEe-ccCCc
Confidence            00000     001112222 3566677788889999988755 1111  1111266679999999999999999 99999


Q ss_pred             EEEEECCc----ceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcE
Q psy14511        266 IDLWHEQE----ERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRY  339 (488)
Q Consensus       266 i~i~d~~~----~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~  339 (488)
                      |.+|.--.    ......+.-|...|.+++|  +|.+|++|+..+.+.+|.+.+++  .+.++.-.++|..+.+|||+.+
T Consensus       229 I~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~--kqfLPRLgs~I~~i~vS~ds~~  306 (792)
T KOG1963|consen  229 ILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGK--KQFLPRLGSPILHIVVSPDSDL  306 (792)
T ss_pred             EEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeecCCC--cccccccCCeeEEEEEcCCCCe
Confidence            99995322    2234556678899999999  89999999999999999999865  6777888899999999999998


Q ss_pred             EEEEe-cCeEEEEECCCCCC
Q psy14511        340 LASGS-NNTVKIWDFRQLDA  358 (488)
Q Consensus       340 l~~~~-d~~i~iwd~~~~~~  358 (488)
                      .+... |+.|.+....+.+.
T Consensus       307 ~sl~~~DNqI~li~~~dl~~  326 (792)
T KOG1963|consen  307 YSLVLEDNQIHLIKASDLEI  326 (792)
T ss_pred             EEEEecCceEEEEeccchhh
Confidence            87776 79999998865543

>KOG1034|consensus

Probab=99.90  E-value=1.7e-21  Score=157.52  Aligned_cols=307  Identities=14%  Similarity=0.193  Sum_probs=205.9

Q ss_pred             eecccCceEEEEEEcc-----CCcEEEEecCCeEEEEeccccCcCCCcccc--cccccceeEEEEecC----CCeEEeee
Q psy14511         31 AITREGDVVCGLKWSP-----NGRYLASGSNNTVKIWDFRQLDAKRPQVNN--QCHLSAVKAIAWCPW----EPTLLATG   99 (488)
Q Consensus        31 ~~~~h~~~V~~l~~sp-----~g~~las~~d~~i~vwd~~~~~~~~~~~~~--~~h~~~v~~l~~~~~----~~~l~~~~   99 (488)
                      ....|..+|..++|++     +-..+|+++.+.+.+|........+.++..  ..|......++|+-|    ..+++++|
T Consensus        33 l~ed~~~~I~gv~fN~~~~~~e~~vfatvG~~rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~~G  112 (385)
T KOG1034|consen   33 LKEDHNKPIFGVAFNSFLGCDEPQVFATVGGNRVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNTGNPFLAAGG  112 (385)
T ss_pred             hhccCCCccceeeeehhcCCCCCceEEEeCCcEEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCCCCeeEEeec
Confidence            3467889999999986     334677778899999998753322333222  237778888899754    33555666


Q ss_pred             CCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeeccccccc
Q psy14511        100 GGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLP  179 (488)
Q Consensus       100 ~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (488)
                      .   -|.|+|.|+.++++...+.++...+..+.+.|..                                          
T Consensus       113 ~---~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~------------------------------------------  147 (385)
T KOG1034|consen  113 Y---LGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDR------------------------------------------  147 (385)
T ss_pred             c---eeEEEEEecchhhhccceeccCccchhhhcCCCC------------------------------------------
Confidence            4   9999999999999999998887766665555433                                          


Q ss_pred             ccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEE
Q psy14511        180 RKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVT  259 (488)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~  259 (488)
                                                  ++.+++++.|..|++|++++..++.++-....|...|.++.|+++|.+++++
T Consensus       148 ----------------------------~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~Sc  199 (385)
T KOG1034|consen  148 ----------------------------PQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASC  199 (385)
T ss_pred             ----------------------------CcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEEEcCCCCeeecc
Confidence                                        4568888899999999999999999887655599999999999999999999


Q ss_pred             eCCCCcEEEEECCcceeee----------------------------eeccccccEEEEEecCCEEEEeecCCeEEEEEC
Q psy14511        260 NTCTEYIDLWHEQEERLIQ----------------------------KLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDV  311 (488)
Q Consensus       260 ~~~~~~i~i~d~~~~~~~~----------------------------~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~  311 (488)
                       +.|.++++|++...+...                            +-.-|...|-|+.|-|+++++-+-++.|..|..
T Consensus       200 -GmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~gd~ilSkscenaI~~w~p  278 (385)
T KOG1034|consen  200 -GMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWFGDFILSKSCENAIVCWKP  278 (385)
T ss_pred             -CCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccchHHHHHHHhhheeecccCceEEEEec
Confidence             999999999997321110                            112366667777777899999999999999987


Q ss_pred             cCCCccceeeecCCccEEEEEEccCCcEEEEEec-CeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEE
Q psy14511        312 RTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN-NTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMW  390 (488)
Q Consensus       312 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~  390 (488)
                      ...++........++.          ..++---+ ....+|-++            .+|.|-++.|+.  |...|.+++|
T Consensus       279 gkl~e~~~~vkp~es~----------~Ti~~~~~~~~c~iWfir------------f~~d~~~~~la~--gnq~g~v~vw  334 (385)
T KOG1034|consen  279 GKLEESIHNVKPPESA----------TTILGEFDYPMCDIWFIR------------FAFDPWQKMLAL--GNQSGKVYVW  334 (385)
T ss_pred             chhhhhhhccCCCccc----------eeeeeEeccCccceEEEE------------EeecHHHHHHhh--ccCCCcEEEE
Confidence            3221111111110000          00000001 111112111            123333444444  4445555555


Q ss_pred             eCCCccee--EEEeec--cccEEEEEEcCCCCEEEEEeCCCcEEEEecC
Q psy14511        391 EYPRLHLI--EELKIH--QERILSAVLSPDQTCVAAASADETISIWNCF  435 (488)
Q Consensus       391 d~~~~~~~--~~~~~~--~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~  435 (488)
                      |++..++.  .++..+  ...|...+||.|+..|+...+|+.|.-||.-
T Consensus       335 dL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwdrv  383 (385)
T KOG1034|consen  335 DLDNNEPPKCTTLTHSKSGSTVRQTSFSRDGSILVLVCDDGTVWRWDRV  383 (385)
T ss_pred             ECCCCCCccCceEEeccccceeeeeeecccCcEEEEEeCCCcEEEEEee
Confidence            55443331  222222  3478999999999999999999999999854

>KOG1007|consensus

Probab=99.90  E-value=3.8e-21  Score=152.77  Aligned_cols=301  Identities=15%  Similarity=0.230  Sum_probs=207.6

Q ss_pred             eEEEee----cCCeEEEEEcccCc--ccceeecccCceEEEEEEcc-CCcEEEEec----C----CeEEEEeccccCcC-
Q psy14511          7 LLSCGT----IGGNILHYDVRTHS--DYPTAITREGDVVCGLKWSP-NGRYLASGS----N----NTVKIWDFRQLDAK-   70 (488)
Q Consensus         7 ~la~g~----~dg~i~iwd~~~~~--~~~~~~~~h~~~V~~l~~sp-~g~~las~~----d----~~i~vwd~~~~~~~-   70 (488)
                      -+.+|.    .|+.|.+.++....  .....+..|.+.|..++-+| +.++|+++.    |    ..+.||.+...... 
T Consensus        28 cFlvgTnslK~dNqVhll~~d~e~s~l~skvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S  107 (370)
T KOG1007|consen   28 CFLVGTNSLKEDNQVHLLRLDSEGSELLSKVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQS  107 (370)
T ss_pred             EEEEeccccCCcceeEEEEecCccchhhhhhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCcc
Confidence            344554    57888888776543  33456788999999999999 566777764    2    36789998753322 


Q ss_pred             -----CCccccc-ccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeee-eeeecCCCcccccccccccccccee
Q psy14511         71 -----RPQVNNQ-CHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEK-CHVKTDSQQANDETISYREQKKRRH  143 (488)
Q Consensus        71 -----~~~~~~~-~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  143 (488)
                           .++..+. .+-+.|.|+.|.|++..+++..    |..|.+|++..+..+ ..+....                  
T Consensus       108 ~~~tlE~v~~Ldteavg~i~cvew~Pns~klasm~----dn~i~l~~l~ess~~vaev~ss~------------------  165 (370)
T KOG1007|consen  108 NSSTLECVASLDTEAVGKINCVEWEPNSDKLASMD----DNNIVLWSLDESSKIVAEVLSSE------------------  165 (370)
T ss_pred             ccchhhHhhcCCHHHhCceeeEEEcCCCCeeEEec----cCceEEEEcccCcchheeecccc------------------
Confidence                 1222222 3557899999999998877766    889999999877642 1111100                  


Q ss_pred             EEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEE
Q psy14511        144 LSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTW  223 (488)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw  223 (488)
                                                                                                      
T Consensus       166 --------------------------------------------------------------------------------  165 (370)
T KOG1007|consen  166 --------------------------------------------------------------------------------  165 (370)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ECCCCceEEEEecCCCCCCceEEEEEcC--CCCeEEEEeCCCCcEEEEECCcceeeeeec-cccccEEEEEecC---CEE
Q psy14511        224 NTKTNKTQLLVEYPTYDNAYISCVAWKP--RTTDLAVTNTCTEYIDLWHEQEERLIQKLR-THMHQVIAMCWNG---NLL  297 (488)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~---~~l  297 (488)
                                 .. . +....++-+|+|  +++.+++.  .++++..||+++..+...++ +|...+..+.|+.   .+|
T Consensus       166 -----------s~-e-~~~~ftsg~WspHHdgnqv~tt--~d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~l  230 (370)
T KOG1007|consen  166 -----------SA-E-MRHSFTSGAWSPHHDGNQVATT--SDSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHIL  230 (370)
T ss_pred             -----------cc-c-ccceecccccCCCCccceEEEe--CCCcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEE
Confidence                       00 0 334566677888  67777776  89999999999887776664 6888999999953   579


Q ss_pred             EEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCC-cEEEEEe-cCeEEEEECCCCCCCcccceeee-eecCCCC
Q psy14511        298 SCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNG-RYLASGS-NNTVKIWDFRQLDAKRPLGLIVP-KLKREGR  374 (488)
Q Consensus       298 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~-~~~~~~~  374 (488)
                      ++++.||.|++||.+..+.+++.+.+|...|+++.|+|.. +++.+++ |..+.+|........+.+..... .=.+   
T Consensus       231 vt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e---  307 (370)
T KOG1007|consen  231 VTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESE---  307 (370)
T ss_pred             EEcCCCccEEEEeccCCCccccccCCCceEEEEEEecCccceEEEecCCCceeEEEeccccccccccccccccccCc---
Confidence            9999999999999999989999999999999999999965 4566666 79999998765422111110000 0000   


Q ss_pred             EEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCC-EEEEEeCCCcEEEEecC
Q psy14511        375 ELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQT-CVAAASADETISIWNCF  435 (488)
Q Consensus       375 ~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~t~~~dg~v~iw~~~  435 (488)
                             ..+..-+.=-+.+ ..+.++..|.+.|++++||.-.. .+|+-|.||.+.|=++.
T Consensus       308 -------~~dseer~kpL~d-g~l~tydehEDSVY~~aWSsadPWiFASLSYDGRviIs~V~  361 (370)
T KOG1007|consen  308 -------DEDSEERVKPLQD-GQLETYDEHEDSVYALAWSSADPWIFASLSYDGRVIISSVP  361 (370)
T ss_pred             -------chhhHHhcccccc-cccccccccccceEEEeeccCCCeeEEEeccCceEEeecCC
Confidence                   0000000001111 23567788999999999998555 57889999999876654

>KOG0270|consensus

Probab=99.90  E-value=8.3e-22  Score=165.61  Aligned_cols=230  Identities=23%  Similarity=0.388  Sum_probs=173.5

Q ss_pred             CCceEEEeecCCeEEEEEcccCccc-ce-------------------eecccCceEEEEEEccCC-cEEEEec-CCeEEE
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDY-PT-------------------AITREGDVVCGLKWSPNG-RYLASGS-NNTVKI   61 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~-~~-------------------~~~~h~~~V~~l~~sp~g-~~las~~-d~~i~v   61 (488)
                      -|+++|.|+.|..|.|||+.-...+ +.                   ...+|++.|..|+|+.+- +.||+|+ |.+|++
T Consensus       191 ~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~l  270 (463)
T KOG0270|consen  191 AGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKL  270 (463)
T ss_pred             CcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEE
Confidence            3789999999999999998632110 11                   124799999999999864 5788898 999999


Q ss_pred             EeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccc
Q psy14511         62 WDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKR  141 (488)
Q Consensus        62 wd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (488)
                      ||+.++++..   ++..|.+.|.+++|+|....++.+|+  +|+++.+.|.+.....                       
T Consensus       271 WD~~~g~p~~---s~~~~~k~Vq~l~wh~~~p~~LLsGs--~D~~V~l~D~R~~~~s-----------------------  322 (463)
T KOG0270|consen  271 WDVDTGKPKS---SITHHGKKVQTLEWHPYEPSVLLSGS--YDGTVALKDCRDPSNS-----------------------  322 (463)
T ss_pred             EEcCCCCcce---ehhhcCCceeEEEecCCCceEEEecc--ccceEEeeeccCcccc-----------------------
Confidence            9999976544   45679999999999998888888877  5999999998742100                       


Q ss_pred             eeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEE
Q psy14511        142 RHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVY  221 (488)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~  221 (488)
                                                                                                      
T Consensus       323 --------------------------------------------------------------------------------  322 (463)
T KOG0270|consen  323 --------------------------------------------------------------------------------  322 (463)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcc-eeeeeeccccccEEEEEec---CCEE
Q psy14511        222 TWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEE-RLIQKLRTHMHQVIAMCWN---GNLL  297 (488)
Q Consensus       222 iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~---~~~l  297 (488)
                               -..++    ..+.|-.++|.|.....+.+++.||+|+-+|++.. +++.+++.|..+|.+++++   ..++
T Consensus       323 ---------~~~wk----~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l  389 (463)
T KOG0270|consen  323 ---------GKEWK----FDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLL  389 (463)
T ss_pred             ---------CceEE----eccceEEEEecCCCceeEEEecCCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcce
Confidence                     00111    34567888999887665555599999999999875 8999999999999999994   6899


Q ss_pred             EEeecCCeEEEEECcCCCccceeeecCC---ccEEEEEEccCCc-EEEEEec-CeEEEEECCCC
Q psy14511        298 SCGTIGGNILHYDVRTHSDYPTAITREG---DVVCGLKWSPNGR-YLASGSN-NTVKIWDFRQL  356 (488)
Q Consensus       298 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~---~~i~~~~~s~~~~-~l~~~~d-~~i~iwd~~~~  356 (488)
                      ++++.|+.+++|++.....  .....|.   +...|+++.|+-. ++|.|+. +.++|||+.+.
T Consensus       390 ~t~s~d~~Vklw~~~~~~~--~~v~~~~~~~~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~~~  451 (463)
T KOG0270|consen  390 STASTDKVVKLWKFDVDSP--KSVKEHSFKLGRLHCFALDPDVAFTLAFGGEKAVLRVWDIFTN  451 (463)
T ss_pred             eeccccceEEEEeecCCCC--cccccccccccceeecccCCCcceEEEecCccceEEEeecccC
Confidence            9999999999999976432  1111121   2356777778765 4555554 77899998765

>KOG4328|consensus

Probab=99.89  E-value=4.5e-21  Score=161.81  Aligned_cols=289  Identities=14%  Similarity=0.181  Sum_probs=198.5

Q ss_pred             eeecccCceEEEEEEccCCc--EEEEec-CCeEEEEeccccC-cCCCcccccccccceeEEEEecCCCeEEeeeCCcccc
Q psy14511         30 TAITREGDVVCGLKWSPNGR--YLASGS-NNTVKIWDFRQLD-AKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQ  105 (488)
Q Consensus        30 ~~~~~h~~~V~~l~~sp~g~--~las~~-d~~i~vwd~~~~~-~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~  105 (488)
                      ....-+.+.|++++|+|..+  ++|+|+ -|.|-+||+.+.+ ....+..+..|.++|.+|.|+|.+...+.+.+  +||
T Consensus       180 ~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssS--yDG  257 (498)
T KOG4328|consen  180 NVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSS--YDG  257 (498)
T ss_pred             ceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeec--cCc
Confidence            34567889999999999654  677777 7999999996322 23344457789999999999997654444444  499


Q ss_pred             eEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCC
Q psy14511        106 TVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAK  185 (488)
Q Consensus       106 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (488)
                      +|++-|++.+.....+.....                                                           
T Consensus       258 tiR~~D~~~~i~e~v~s~~~d-----------------------------------------------------------  278 (498)
T KOG4328|consen  258 TIRLQDFEGNISEEVLSLDTD-----------------------------------------------------------  278 (498)
T ss_pred             eeeeeeecchhhHHHhhcCcc-----------------------------------------------------------
Confidence            999999987653222211100                                                           


Q ss_pred             CceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCce-EEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCC
Q psy14511        186 PERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKT-QLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTE  264 (488)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~  264 (488)
                                ...++...+..+...++++..=|...+||.+++.. ...+.+   |...|+.++++|...+++++++.|+
T Consensus       279 ----------~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~l---h~kKI~sv~~NP~~p~~laT~s~D~  345 (498)
T KOG4328|consen  279 ----------NIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRL---HKKKITSVALNPVCPWFLATASLDQ  345 (498)
T ss_pred             ----------ceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhh---hhcccceeecCCCCchheeecccCc
Confidence                      00011111222345677777667999999998764 333344   7779999999999877766669999


Q ss_pred             cEEEEECCcce----eeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECc---CCCccceeeecCCc-----cEEE
Q psy14511        265 YIDLWHEQEER----LIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVR---THSDYPTAITREGD-----VVCG  330 (488)
Q Consensus       265 ~i~i~d~~~~~----~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~---~~~~~~~~~~~~~~-----~i~~  330 (488)
                      +.+|||++.-.    +....-.|...|.+..|  ++..|++.+.|..|+|||..   ....+...+.....     ....
T Consensus       346 T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~~I~Hn~~t~RwlT~fK  425 (498)
T KOG4328|consen  346 TAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLGTIPHNNRTGRWLTPFK  425 (498)
T ss_pred             ceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCceEEeecccccccCCccceeeccCcccccccchh
Confidence            99999998632    22334469999999999  44459999999999999984   22223333322111     1345


Q ss_pred             EEEccCCcEEEEEec-CeEEEEECCCCCCCcccce----e---eeeecCCCCEEEEEccCCCCeEEEEeCC
Q psy14511        331 LKWSPNGRYLASGSN-NTVKIWDFRQLDAKRPLGL----I---VPKLKREGRELVTSHGKQDCSLKMWEYP  393 (488)
Q Consensus       331 ~~~s~~~~~l~~~~d-~~i~iwd~~~~~~~~~~~~----~---~~~~~~~~~~l~~~~g~~~~~i~i~d~~  393 (488)
                      .+|.|+..+++++.- ..|-|+|-..++....+..    .   +..|+|-+..+++. |...|.|+||--+
T Consensus       426 A~W~P~~~li~vg~~~r~IDv~~~~~~q~v~el~~P~~~tI~~vn~~HP~~~~~~aG-~~s~Gki~vft~k  495 (498)
T KOG4328|consen  426 AAWDPDYNLIVVGRYPRPIDVFDGNGGQMVCELHDPESSTIPSVNEFHPMRDTLAAG-GNSSGKIYVFTNK  495 (498)
T ss_pred             heeCCCccEEEEeccCcceeEEcCCCCEEeeeccCccccccccceeecccccceecc-CCccceEEEEecC
Confidence            689999999999985 8899999887753332211    1   33899999867664 6778889988644

>KOG4283|consensus

Probab=99.89  E-value=3.4e-21  Score=153.47  Aligned_cols=172  Identities=17%  Similarity=0.381  Sum_probs=141.3

Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe-----cCCEEEEeecCCeEEEEECcCC
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW-----NGNLLSCGTIGGNILHYDVRTH  314 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~-----~~~~l~~~~~dg~i~i~d~~~~  314 (488)
                      |.-.|..+.|-|-..-++++++.|.++++||..+-+....++ .++.|++-++     ..-++++|..+-.|++.|+..+
T Consensus       100 Hky~iss~~WyP~DtGmFtssSFDhtlKVWDtnTlQ~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SG  178 (397)
T KOG4283|consen  100 HKYAISSAIWYPIDTGMFTSSSFDHTLKVWDTNTLQEAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASG  178 (397)
T ss_pred             ceeeeeeeEEeeecCceeecccccceEEEeecccceeeEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEeccCC
Confidence            788899999999777677766999999999999987776664 3455554444     3568888999999999999986


Q ss_pred             CccceeeecCCccEEEEEEccCCcEE-EEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeC
Q psy14511        315 SDYPTAITREGDVVCGLKWSPNGRYL-ASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEY  392 (488)
Q Consensus       315 ~~~~~~~~~~~~~i~~~~~s~~~~~l-~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~  392 (488)
                       .....+.+|.+.|.++.|+|...++ |+|+ ||.|++||++..                           .|.+++.|.
T Consensus       179 -s~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRra---------------------------sgcf~~lD~  230 (397)
T KOG4283|consen  179 -SFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRA---------------------------SGCFRVLDQ  230 (397)
T ss_pred             -cceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecc---------------------------cceeEEeec
Confidence             5889999999999999999988764 5666 799999999854                           456777777


Q ss_pred             CCccee---EEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcc
Q psy14511        393 PRLHLI---EELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKK  440 (488)
Q Consensus       393 ~~~~~~---~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~  440 (488)
                      .+++..   ++-.+|.+.|+.++|+.|+.++++++.|..+++|+..+|+..
T Consensus       231 hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G~nt  281 (397)
T KOG4283|consen  231 HNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNMESGRNT  281 (397)
T ss_pred             ccCccCccccccccccceeeeeeecccchhhhhccCccceEEeecccCccc
Confidence            665433   334579999999999999999999999999999999987653

>KOG1034|consensus

Probab=99.89  E-value=2.7e-22  Score=162.12  Aligned_cols=255  Identities=18%  Similarity=0.303  Sum_probs=173.2

Q ss_pred             CceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCC-cEEEEec-CCeEEEEeccccCcCCCcccccccccc
Q psy14511          5 GNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNG-RYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSA   82 (488)
Q Consensus         5 g~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g-~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~   82 (488)
                      .-+||+|+.-|.|+|.|+.+++ ....+.+|...|+.+.|.|+. ++|++++ |..|++|++.+..+...+.-..+|...
T Consensus       105 ~p~la~~G~~GvIrVid~~~~~-~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrde  183 (385)
T KOG1034|consen  105 NPFLAAGGYLGVIRVIDVVSGQ-CSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDE  183 (385)
T ss_pred             CeeEEeecceeEEEEEecchhh-hccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCc
Confidence            3478888999999999999988 446789999999999999965 6888998 999999999987766666667889999


Q ss_pred             eeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccc
Q psy14511         83 VKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQS  162 (488)
Q Consensus        83 v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (488)
                      |.++.|+++|.+++++|.   |.++++|++...+....+...      ..++++...                       
T Consensus       184 VLSvD~~~~gd~i~ScGm---Dhslk~W~l~~~~f~~~lE~s------~~~~~~~t~-----------------------  231 (385)
T KOG1034|consen  184 VLSVDFSLDGDRIASCGM---DHSLKLWRLNVKEFKNKLELS------ITYSPNKTT-----------------------  231 (385)
T ss_pred             EEEEEEcCCCCeeeccCC---cceEEEEecChhHHhhhhhhh------cccCCCCcc-----------------------
Confidence            999999999999999887   999999999855433222211      011110000                       


Q ss_pred             cccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCC
Q psy14511        163 KRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNA  242 (488)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~  242 (488)
                                       ...|.   ..                              ..+.+..+      ...   |..
T Consensus       232 -----------------~pfpt---~~------------------------------~~fp~fst------~di---Hrn  252 (385)
T KOG1034|consen  232 -----------------RPFPT---PK------------------------------THFPDFST------TDI---HRN  252 (385)
T ss_pred             -----------------CcCCc---cc------------------------------cccccccc------ccc---ccc
Confidence                             00000   00                              00000000      001   666


Q ss_pred             ceEEEEEcCCCCeEEEEeCCCCcEEEEECC-cce-------------eeeeeccccccEEEEEe--c--CCEEEEeecCC
Q psy14511        243 YISCVAWKPRTTDLAVTNTCTEYIDLWHEQ-EER-------------LIQKLRTHMHQVIAMCW--N--GNLLSCGTIGG  304 (488)
Q Consensus       243 ~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~-~~~-------------~~~~~~~~~~~v~~~~~--~--~~~l~~~~~dg  304 (488)
                      +|.|+.|-  |+++++- +.++.|..|... -.+             .+..+.-....+.-+.|  |  ++.|+.|...|
T Consensus       253 yVDCvrw~--gd~ilSk-scenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g  329 (385)
T KOG1034|consen  253 YVDCVRWF--GDFILSK-SCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSG  329 (385)
T ss_pred             hHHHHHHH--hhheeec-ccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhhccCCC
Confidence            66676664  3455555 666677777651 111             12222333444555555  3  68999999999


Q ss_pred             eEEEEECcCCCccce-eeec--CCccEEEEEEccCCcEEEEEec-CeEEEEECC
Q psy14511        305 NILHYDVRTHSDYPT-AITR--EGDVVCGLKWSPNGRYLASGSN-NTVKIWDFR  354 (488)
Q Consensus       305 ~i~i~d~~~~~~~~~-~~~~--~~~~i~~~~~s~~~~~l~~~~d-~~i~iwd~~  354 (488)
                      .+++||+++...... ++..  ....|...+|+.||..|+..+| +.|.-||..
T Consensus       330 ~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwdrv  383 (385)
T KOG1034|consen  330 KVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSFSRDGSILVLVCDDGTVWRWDRV  383 (385)
T ss_pred             cEEEEECCCCCCccCceEEeccccceeeeeeecccCcEEEEEeCCCcEEEEEee
Confidence            999999998654322 2222  2456899999999999888875 999999854

>KOG1009|consensus

Probab=99.89  E-value=1.1e-20  Score=157.26  Aligned_cols=118  Identities=22%  Similarity=0.345  Sum_probs=94.8

Q ss_pred             ceEEEeecCCeEEEEEcccCccc--------ceeecccCceEEEEEEccCCcEEEEec-CCeEEEEecc--------c--
Q psy14511          6 NLLSCGTIGGNILHYDVRTHSDY--------PTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFR--------Q--   66 (488)
Q Consensus         6 ~~la~g~~dg~i~iwd~~~~~~~--------~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~--------~--   66 (488)
                      +.||+|+.|..|+||-+.....-        ...|..|...|+++.|+|+|.+||+|+ +|.|.+|...        +  
T Consensus        27 ~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~  106 (434)
T KOG1009|consen   27 NKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTEA  106 (434)
T ss_pred             cceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccchh
Confidence            48999999999999998764322        235689999999999999999999999 7999999876        2  


Q ss_pred             ---cCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCC
Q psy14511         67 ---LDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQ  126 (488)
Q Consensus        67 ---~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~  126 (488)
                         .+.......+.+|...|..++|+|++.++++.+.   |..+++||+..|+....+..+..
T Consensus       107 ~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~---dns~~l~Dv~~G~l~~~~~dh~~  166 (434)
T KOG1009|consen  107 DLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSV---DNSVRLWDVHAGQLLAILDDHEH  166 (434)
T ss_pred             hhCccceEEEEEecccccchhhhhccCCCceeeeeec---cceEEEEEeccceeEeecccccc
Confidence               1112223346789999999999999988777776   99999999999987766665544

>KOG0322|consensus

Probab=99.88  E-value=2.9e-21  Score=151.44  Aligned_cols=285  Identities=18%  Similarity=0.237  Sum_probs=184.4

Q ss_pred             eeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCccccc-ccccceeEEEEecCCCeEEeeeCCcccceE
Q psy14511         30 TAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQ-CHLSAVKAIAWCPWEPTLLATGGGICDQTV  107 (488)
Q Consensus        30 ~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~-~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i  107 (488)
                      ..+.+|.+.|+++.|-.+++ |.+|. -|.|++|++.+..   ....+. .|...|+.+.-.|++ .+.+-|.   |..+
T Consensus         8 fvLRp~~~~v~s~~fqa~~r-L~sg~~~G~V~~w~lqt~r---~~~~~r~~g~~~it~lq~~p~d-~l~tqgR---d~~L   79 (323)
T KOG0322|consen    8 FVLRPHSSSVTSVLFQANER-LMSGLSVGIVKMWVLQTER---DLPLIRLFGRLFITNLQSIPND-SLDTQGR---DPLL   79 (323)
T ss_pred             eEeccccchheehhhccchh-hhcccccceEEEEEeecCc---cchhhhhhccceeeceeecCCc-chhhcCC---CceE
Confidence            45679999999999998887 66666 8999999998733   333344 477899999999975 5788887   9999


Q ss_pred             EEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCc
Q psy14511        108 RLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPE  187 (488)
Q Consensus       108 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (488)
                      .+|++.-+..+..-.   -.++...|....                                                  
T Consensus        80 ~lw~ia~s~~i~i~S---i~~nslgFCrfS--------------------------------------------------  106 (323)
T KOG0322|consen   80 ILWTIAYSAFISIHS---IVVNSLGFCRFS--------------------------------------------------  106 (323)
T ss_pred             EEEEccCcceEEEee---eeccccccccce--------------------------------------------------
Confidence            999997654322111   111111110000                                                  


Q ss_pred             eeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEE
Q psy14511        188 RILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYID  267 (488)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~  267 (488)
                                             +..                          ......-+.+.|+.       +.+. +.
T Consensus       107 -----------------------l~~--------------------------~~k~~eqll~yp~r-------gsde-~h  129 (323)
T KOG0322|consen  107 -----------------------LVK--------------------------KPKNSEQLLEYPSR-------GSDE-TH  129 (323)
T ss_pred             -----------------------ecc--------------------------CCCcchhheecCCc-------ccch-hh
Confidence                                   000                          00000001111110       0000 11


Q ss_pred             EEECCcceeeeee----ccccccEEEEEe---cC--CEEEEeecCCeEEEEECcCCC---------ccceeeecCCccEE
Q psy14511        268 LWHEQEERLIQKL----RTHMHQVIAMCW---NG--NLLSCGTIGGNILHYDVRTHS---------DYPTAITREGDVVC  329 (488)
Q Consensus       268 i~d~~~~~~~~~~----~~~~~~v~~~~~---~~--~~l~~~~~dg~i~i~d~~~~~---------~~~~~~~~~~~~i~  329 (488)
                      +-|......+...    ....+.+.+..+   ++  -++++|.++|.+.+||+.++.         +.......|..+|.
T Consensus       130 ~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvl  209 (323)
T KOG0322|consen  130 KQDGGDTTQVQIADDSERSKLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVL  209 (323)
T ss_pred             hhccCccceeEccCchhccccCceeeeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcce
Confidence            1111111111111    112334445444   12  356677888888888888752         12334556889999


Q ss_pred             EEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceee---------eeecCCCCEEEEEccCCCCeEEEEeCCCcceeE
Q psy14511        330 GLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIV---------PKLKREGRELVTSHGKQDCSLKMWEYPRLHLIE  399 (488)
Q Consensus       330 ~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~---------~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~  399 (488)
                      ++.+.+.-..=++++ +..+..|++......-.++...         ...-||++.+++  ++.|+.|++|+.+++.++.
T Consensus       210 sldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KIlAT--AGWD~RiRVyswrtl~pLA  287 (323)
T KOG0322|consen  210 SLDYASSCDRGISGGADDKLVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKILAT--AGWDHRIRVYSWRTLNPLA  287 (323)
T ss_pred             eeeechhhcCCcCCCccccceeeeeccccCcccccceEEecCCCccceEEccCCcEEee--cccCCcEEEEEeccCCchh
Confidence            999987665666666 5788888887542222222221         188899999999  6899999999999999999


Q ss_pred             EEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEec
Q psy14511        400 ELKIHQERILSAVLSPDQTCVAAASADETISIWNC  434 (488)
Q Consensus       400 ~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~  434 (488)
                      .+..|++.|++++|+||...+|.+|.|+.|.+|++
T Consensus       288 VLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL  322 (323)
T KOG0322|consen  288 VLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL  322 (323)
T ss_pred             hhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence            99999999999999999999999999999999986

>KOG1188|consensus

Probab=99.88  E-value=7.3e-21  Score=154.73  Aligned_cols=227  Identities=13%  Similarity=0.268  Sum_probs=167.4

Q ss_pred             CCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEe---CCCCcEEEEECCccee-eeee-cc
Q psy14511        208 YHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTN---TCTEYIDLWHEQEERL-IQKL-RT  282 (488)
Q Consensus       208 ~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~---~~~~~i~i~d~~~~~~-~~~~-~~  282 (488)
                      +..+++++.||.|++||++.......+........+..|++.+-.++.++++.   ..+-.|.+||.+..+. +..+ ..
T Consensus        84 ~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eS  163 (376)
T KOG1188|consen   84 PHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNES  163 (376)
T ss_pred             CCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhh
Confidence            56789999999999999999887777776653446778888877777777761   2467899999998665 5544 57


Q ss_pred             ccccEEEEEe---cCCEEEEeecCCeEEEEECcCCCc--cceeeecCCccEEEEEEccCC-cEEEEEe-cCeEEEEECCC
Q psy14511        283 HMHQVIAMCW---NGNLLSCGTIGGNILHYDVRTHSD--YPTAITREGDVVCGLKWSPNG-RYLASGS-NNTVKIWDFRQ  355 (488)
Q Consensus       283 ~~~~v~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~i~~~~~s~~~-~~l~~~~-d~~i~iwd~~~  355 (488)
                      |...|+++.|   ++++|++|+.||.+.+||+.....  .+.....+...|..+.|..++ +.|.+-+ .....+|+++.
T Consensus       164 H~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~  243 (376)
T KOG1188|consen  164 HNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNEEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELED  243 (376)
T ss_pred             ccCcceeEEecCCCCCeEEeecccceEEeeecCCCcchhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccC
Confidence            9999999999   789999999999999999976532  333444567779999999888 3455555 69999999998


Q ss_pred             CCCCccccee----------------eeeecCCC-CEEEEEccCCCCeEEEEeC---CC---cceeEEEee-ccccEEEE
Q psy14511        356 LDAKRPLGLI----------------VPKLKREG-RELVTSHGKQDCSLKMWEY---PR---LHLIEELKI-HQERILSA  411 (488)
Q Consensus       356 ~~~~~~~~~~----------------~~~~~~~~-~~l~~~~g~~~~~i~i~d~---~~---~~~~~~~~~-~~~~v~~~  411 (488)
                      +.....+...                +...+|.+ ...+++ |..-+...++-+   .+   .+.+..+.+ |..-|.++
T Consensus       244 ~~~~~~~~~~~~~~~d~r~~~~~dY~I~~~~~~~~~~~~l~-g~~~n~~~~~~~~~~~s~~~~~~~a~l~g~~~eiVR~i  322 (376)
T KOG1188|consen  244 GSEETWLENPDVSADDLRKEDNCDYVINEHSPGDKDTCALA-GTDSNKGTIFPLVDTSSGSLLTEPAILQGGHEEIVRDI  322 (376)
T ss_pred             CChhhcccCccchhhhHHhhhhhhheeecccCCCcceEEEe-ccccCceeEEEeeecccccccCccccccCCcHHHHHHH
Confidence            7644333222                33555544 444443 443455544433   23   345566766 66778999


Q ss_pred             EEcCCCCEEEEEeCCCcEEEEecC
Q psy14511        412 VLSPDQTCVAAASADETISIWNCF  435 (488)
Q Consensus       412 ~~s~~~~~l~t~~~dg~v~iw~~~  435 (488)
                      .|...+.++.||+.||.+.+|..+
T Consensus       323 ~~~~~~~~l~TGGEDG~l~~Wk~~  346 (376)
T KOG1188|consen  323 LFDVKNDVLYTGGEDGLLQAWKVE  346 (376)
T ss_pred             hhhcccceeeccCCCceEEEEecC
Confidence            999899999999999999999964

>KOG2445|consensus

Probab=99.88  E-value=3.9e-20  Score=148.36  Aligned_cols=244  Identities=18%  Similarity=0.268  Sum_probs=169.7

Q ss_pred             CCceEEEeecCCeEEEEEcccCcc---cceeecccCceEEEEEEcc--CCcEEEEec-CCeEEEEecccc------CcCC
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSD---YPTAITREGDVVCGLKWSP--NGRYLASGS-NNTVKIWDFRQL------DAKR   71 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~---~~~~~~~h~~~V~~l~~sp--~g~~las~~-d~~i~vwd~~~~------~~~~   71 (488)
                      -|+.+|+++.|++|.|||.+....   .......|.+.|..+.|.+  -|+.+|+++ |+++.||.=...      ....
T Consensus        24 ~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE~~~~~~~~~~~Wv  103 (361)
T KOG2445|consen   24 YGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEEQEKSEEAHGRRWV  103 (361)
T ss_pred             cCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeeeecccccccccceeE
Confidence            599999999999999999654332   2234678999999999976  599999999 999999975211      1122


Q ss_pred             CcccccccccceeEEEEecC--CCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEe
Q psy14511         72 PQVNNQCHLSAVKAIAWCPW--EPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLH  149 (488)
Q Consensus        72 ~~~~~~~h~~~v~~l~~~~~--~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (488)
                      ...++....+.|+++.|.|.  |-.|++++.   ||.+|||+..+-..+........                       
T Consensus       104 ~~ttl~DsrssV~DV~FaP~hlGLklA~~~a---DG~lRIYEA~dp~nLs~W~Lq~E-----------------------  157 (361)
T KOG2445|consen  104 RRTTLVDSRSSVTDVKFAPKHLGLKLAAASA---DGILRIYEAPDPMNLSQWTLQHE-----------------------  157 (361)
T ss_pred             EEEEeecCCcceeEEEecchhcceEEEEecc---CcEEEEEecCCccccccchhhhh-----------------------
Confidence            33345667789999999996  434444444   99999998754332222111100                       


Q ss_pred             eeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCC----CcEEEEECCC------e
Q psy14511        150 GFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGY----HDTLAVALDT------S  219 (488)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~d~------~  219 (488)
                                                           .+....+.........++.|++    ..+++.+.+.      .
T Consensus       158 -------------------------------------i~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~  200 (361)
T KOG2445|consen  158 -------------------------------------IQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNK  200 (361)
T ss_pred             -------------------------------------hhhccCCcccccCcceEEeeccccccCceEEEEcccCCccccc
Confidence                                                 0000111112223334455543    3466666555      8


Q ss_pred             EEEEECCCC--ceEEEEecCCCCCCceEEEEEcCCC----CeEEEEeCCCCcEEEEECCcc-------------------
Q psy14511        220 VYTWNTKTN--KTQLLVEYPTYDNAYISCVAWKPRT----TDLAVTNTCTEYIDLWHEQEE-------------------  274 (488)
Q Consensus       220 v~iw~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~----~~l~~~~~~~~~i~i~d~~~~-------------------  274 (488)
                      ++||....+  +.....++++ +..+|+.++|.|+-    ..|+++ +.|| |+||.+...                   
T Consensus       201 ~~Iye~~e~~rKw~kva~L~d-~~dpI~di~wAPn~Gr~y~~lAvA-~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~  277 (361)
T KOG2445|consen  201 VKIYEYNENGRKWLKVAELPD-HTDPIRDISWAPNIGRSYHLLAVA-TKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLP  277 (361)
T ss_pred             eEEEEecCCcceeeeehhcCC-CCCcceeeeeccccCCceeeEEEe-ecCc-EEEEEEeeccchhhhhcccCCCCccccc
Confidence            888876543  5667777777 99999999999974    456777 8999 999998631                   


Q ss_pred             -eeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcC
Q psy14511        275 -RLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRT  313 (488)
Q Consensus       275 -~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~  313 (488)
                       +.+..+..|.+.|..+.|  .|..|.+.+.||.+++|...-
T Consensus       278 v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWkany  319 (361)
T KOG2445|consen  278 VEKVSELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKANY  319 (361)
T ss_pred             eEEeeeccCCCCceEEEEEeeeeeEEeecCCCceeeehhhhh
Confidence             234456789999999999  499999999999999998653

>KOG0307|consensus

Probab=99.88  E-value=1.8e-21  Score=182.53  Aligned_cols=248  Identities=19%  Similarity=0.352  Sum_probs=195.5

Q ss_pred             ceEEEEEEccCCcE----EEEec-CCeEEEEeccc---cCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEE
Q psy14511         37 DVVCGLKWSPNGRY----LASGS-NNTVKIWDFRQ---LDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVR  108 (488)
Q Consensus        37 ~~V~~l~~sp~g~~----las~~-d~~i~vwd~~~---~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~  108 (488)
                      ...+.|+|.+.|..    ||.|. ||.|.+||...   +.....+.+...|++.|..+.|++....++++|..  ||.|.
T Consensus        65 ~rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~--~geI~  142 (1049)
T KOG0307|consen   65 NRFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGAD--DGEIL  142 (1049)
T ss_pred             ccceeeeecccCCCccceeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCC--CCcEE
Confidence            45789999998776    66665 99999999876   34455666778899999999999999888888885  99999


Q ss_pred             EEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCce
Q psy14511        109 LWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPER  188 (488)
Q Consensus       109 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (488)
                      |||+.+-+......                                                                  
T Consensus       143 iWDlnn~~tP~~~~------------------------------------------------------------------  156 (1049)
T KOG0307|consen  143 IWDLNKPETPFTPG------------------------------------------------------------------  156 (1049)
T ss_pred             EeccCCcCCCCCCC------------------------------------------------------------------
Confidence            99997643211000                                                                  


Q ss_pred             eecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEE
Q psy14511        189 ILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDL  268 (488)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i  268 (488)
                                                                     ... ....|.+++|+..-.+++++++.+|.+.|
T Consensus       157 -----------------------------------------------~~~-~~~eI~~lsWNrkvqhILAS~s~sg~~~i  188 (1049)
T KOG0307|consen  157 -----------------------------------------------SQA-PPSEIKCLSWNRKVSHILASGSPSGRAVI  188 (1049)
T ss_pred             -----------------------------------------------CCC-CcccceEeccchhhhHHhhccCCCCCcee
Confidence                                                           000 45679999999877666666589999999


Q ss_pred             EECCcceeeeeeccccc--cEEEEEec---CCEEEEeecCC---eEEEEECcCCCccceeeecCCccEEEEEEccCC-cE
Q psy14511        269 WHEQEERLIQKLRTHMH--QVIAMCWN---GNLLSCGTIGG---NILHYDVRTHSDYPTAITREGDVVCGLKWSPNG-RY  339 (488)
Q Consensus       269 ~d~~~~~~~~~~~~~~~--~v~~~~~~---~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~  339 (488)
                      ||++..+.+..+..+..  .+..+.|+   ...+++++.|.   .|.+||++....+.+.+.+|...|.++.|++.+ ++
T Consensus       189 WDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~l  268 (1049)
T KOG0307|consen  189 WDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRL  268 (1049)
T ss_pred             ccccCCCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCchh
Confidence            99999888887766554  46788883   45666666553   699999999888899999999999999999977 56


Q ss_pred             EEEEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCC-
Q psy14511        340 LASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQT-  418 (488)
Q Consensus       340 l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~-  418 (488)
                      |+++                                      +.|+.|.+|+.++++.+.++....+.+..+.|+|... 
T Consensus       269 llSs--------------------------------------gkD~~ii~wN~~tgEvl~~~p~~~nW~fdv~w~pr~P~  310 (1049)
T KOG0307|consen  269 LLSS--------------------------------------GKDNRIICWNPNTGEVLGELPAQGNWCFDVQWCPRNPS  310 (1049)
T ss_pred             hhcc--------------------------------------cCCCCeeEecCCCceEeeecCCCCcceeeeeecCCCcc
Confidence            6655                                      4466666677777888888888788999999999765 


Q ss_pred             EEEEEeCCCcEEEEecCCCC
Q psy14511        419 CVAAASADETISIWNCFPRD  438 (488)
Q Consensus       419 ~l~t~~~dg~v~iw~~~~~~  438 (488)
                      .++.++-||.|.|+.+....
T Consensus       311 ~~A~asfdgkI~I~sl~~~~  330 (1049)
T KOG0307|consen  311 VMAAASFDGKISIYSLQGTD  330 (1049)
T ss_pred             hhhhheeccceeeeeeecCC
Confidence            88899999999999998765

>KOG4497|consensus

Probab=99.87  E-value=1.9e-20  Score=151.67  Aligned_cols=329  Identities=17%  Similarity=0.255  Sum_probs=226.5

Q ss_pred             EEEEccCCcEEEEecCCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeee
Q psy14511         41 GLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCH  120 (488)
Q Consensus        41 ~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~  120 (488)
                      -.+|||+|+|+|+.++..+.|-|.++.+..   +.+. --..|..+.|..|..+++.+...  |+.|.+|++...+--..
T Consensus        13 ~c~fSp~g~yiAs~~~yrlviRd~~tlq~~---qlf~-cldki~yieW~ads~~ilC~~yk--~~~vqvwsl~Qpew~ck   86 (447)
T KOG4497|consen   13 FCSFSPCGNYIASLSRYRLVIRDSETLQLH---QLFL-CLDKIVYIEWKADSCHILCVAYK--DPKVQVWSLVQPEWYCK   86 (447)
T ss_pred             ceeECCCCCeeeeeeeeEEEEeccchhhHH---HHHH-HHHHhhheeeeccceeeeeeeec--cceEEEEEeecceeEEE
Confidence            368999999999999889999998874322   2122 23578889999999888888774  89999999988776666


Q ss_pred             eecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccce
Q psy14511        121 VKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFY  200 (488)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (488)
                      +......                                                                         
T Consensus        87 Ideg~ag-------------------------------------------------------------------------   93 (447)
T KOG4497|consen   87 IDEGQAG-------------------------------------------------------------------------   93 (447)
T ss_pred             eccCCCc-------------------------------------------------------------------------
Confidence            6554332                                                                         


Q ss_pred             eeeeeeCC--CcEEEE-ECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcE---EEEECCcc
Q psy14511        201 TSGLDWGY--HDTLAV-ALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYI---DLWHEQEE  274 (488)
Q Consensus       201 ~~~~~~~~--~~~~~~-~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i---~i~d~~~~  274 (488)
                      +...+|++  ..++.. ..+-+|.+|.+.+.+...+.-    ....+..++|+|+|++.+.. +.....   .|..-+..
T Consensus        94 ls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~~~----pK~~~kg~~f~~dg~f~ai~-sRrDCkdyv~i~~c~~W  168 (447)
T KOG4497|consen   94 LSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLLPH----PKTNVKGYAFHPDGQFCAIL-SRRDCKDYVQISSCKAW  168 (447)
T ss_pred             ceeeeECCCcceEeeeecceeEEEEEEeccceeEEecc----cccCceeEEECCCCceeeee-ecccHHHHHHHHhhHHH
Confidence            22344444  244444 488999999999887654432    34456899999999998888 443221   11111222


Q ss_pred             eeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEE
Q psy14511        275 RLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIW  351 (488)
Q Consensus       275 ~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iw  351 (488)
                      ..++.+....-..+.+.|  ||+.++         +||---.  .........-.+..++|+|.+++|+.|+ |+.+++.
T Consensus       169 ~ll~~f~~dT~DltgieWsPdg~~la---------Vwd~~Le--ykv~aYe~~lG~k~v~wsP~~qflavGsyD~~lrvl  237 (447)
T KOG4497|consen  169 ILLKEFKLDTIDLTGIEWSPDGNWLA---------VWDNVLE--YKVYAYERGLGLKFVEWSPCNQFLAVGSYDQMLRVL  237 (447)
T ss_pred             HHHHhcCCCcccccCceECCCCcEEE---------Eecchhh--heeeeeeeccceeEEEeccccceEEeeccchhhhhh
Confidence            333444444455566777  555544         4553211  1111112223477889999999999998 7888876


Q ss_pred             ECCCCCCCccccee------------------------------------------------------------------
Q psy14511        352 DFRQLDAKRPLGLI------------------------------------------------------------------  365 (488)
Q Consensus       352 d~~~~~~~~~~~~~------------------------------------------------------------------  365 (488)
                      +--+.+....+-..                                                                  
T Consensus       238 nh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnP  317 (447)
T KOG4497|consen  238 NHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVHKLKPPTDFPNP  317 (447)
T ss_pred             ceeeeeehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCccccCccccchhhhhhhhcceeeecccCCCCCCCc
Confidence            64332111100000                                                                  


Q ss_pred             -----eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcc
Q psy14511        366 -----VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKK  440 (488)
Q Consensus       366 -----~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~  440 (488)
                           .-+|++|..++++-.....+.+-+||++..+....+. ...+|....|.|....|+.+.....+++|........
T Consensus       318 k~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLi-Qk~piraf~WdP~~prL~vctg~srLY~W~psg~~~V  396 (447)
T KOG4497|consen  318 KCGAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVLI-QKHPIRAFEWDPGRPRLVVCTGKSRLYFWAPSGPRVV  396 (447)
T ss_pred             ccccceeeecCCceEEeeecCCCCceEEEEechhhhhhhhhh-hccceeEEEeCCCCceEEEEcCCceEEEEcCCCceEE
Confidence                 1199999999999777777889999999877655554 5678999999999999998888888999999887777


Q ss_pred             ccccccCCcceEEeecCCCceEEEE
Q psy14511        441 RKARQVGSGSSLEFAILKQPVSLTA  465 (488)
Q Consensus       441 ~~~~~~~~v~~~~~s~~~~~~~~~~  465 (488)
                      ..+..+-.|..+.|..+|..+.+.+
T Consensus       397 ~vP~~GF~i~~l~W~~~g~~i~l~~  421 (447)
T KOG4497|consen  397 GVPKKGFNIQKLQWLQPGEFIVLCG  421 (447)
T ss_pred             ecCCCCceeeeEEecCCCcEEEEEc
Confidence            6677778899999999998876544

>KOG0650|consensus

Probab=99.87  E-value=5.5e-21  Score=166.68  Aligned_cols=269  Identities=15%  Similarity=0.209  Sum_probs=194.5

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCc--EEEEecCCeEEEEecccc--------------
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGR--YLASGSNNTVKIWDFRQL--------------   67 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~--~las~~d~~i~vwd~~~~--------------   67 (488)
                      .|.+||+|+.||+|+||.+.++.++.+...  .+.|.|++|+|.++  .||++-...+.|-+..-|              
T Consensus       411 ~G~wlasGsdDGtvriWEi~TgRcvr~~~~--d~~I~~vaw~P~~~~~vLAvA~~~~~~ivnp~~G~~~e~~~t~ell~~  488 (733)
T KOG0650|consen  411 SGEWLASGSDDGTVRIWEIATGRCVRTVQF--DSEIRSVAWNPLSDLCVLAVAVGECVLIVNPIFGDRLEVGPTKELLAS  488 (733)
T ss_pred             CcceeeecCCCCcEEEEEeecceEEEEEee--cceeEEEEecCCCCceeEEEEecCceEEeCccccchhhhcchhhhhhc
Confidence            689999999999999999999998866432  33799999999766  455554333444432111              


Q ss_pred             -------------------CcC-CCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCc
Q psy14511         68 -------------------DAK-RPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQ  127 (488)
Q Consensus        68 -------------------~~~-~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~  127 (488)
                                         +.. .-+.....|...|..|.|+..|.||+++...+....|.|.++........+......
T Consensus       489 ~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQLSK~~sQ~PF~kskG~  568 (733)
T KOG0650|consen  489 APNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQLSKRKSQSPFRKSKGL  568 (733)
T ss_pred             CCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEEEEecccccccCchhhcCCc
Confidence                               000 001112347788999999999999998887544678889998766543333222222


Q ss_pred             cccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC
Q psy14511        128 ANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG  207 (488)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (488)
                      +...                                                                         .|.
T Consensus       569 vq~v-------------------------------------------------------------------------~FH  575 (733)
T KOG0650|consen  569 VQRV-------------------------------------------------------------------------KFH  575 (733)
T ss_pred             eeEE-------------------------------------------------------------------------Eec
Confidence            2221                                                                         122


Q ss_pred             C-CcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcc-eeeeeeccccc
Q psy14511        208 Y-HDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEE-RLIQKLRTHMH  285 (488)
Q Consensus       208 ~-~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~-~~~~~~~~~~~  285 (488)
                      + ...+.++....|++||+...+.++.+..   ....|..++.+|.|..|+++ +.|+.+..+|+.-. ++.+++..|..
T Consensus       576 Ps~p~lfVaTq~~vRiYdL~kqelvKkL~t---g~kwiS~msihp~GDnli~g-s~d~k~~WfDldlsskPyk~lr~H~~  651 (733)
T KOG0650|consen  576 PSKPYLFVATQRSVRIYDLSKQELVKKLLT---GSKWISSMSIHPNGDNLILG-SYDKKMCWFDLDLSSKPYKTLRLHEK  651 (733)
T ss_pred             CCCceEEEEeccceEEEehhHHHHHHHHhc---CCeeeeeeeecCCCCeEEEe-cCCCeeEEEEcccCcchhHHhhhhhh
Confidence            2 2456666788999999988665443322   56689999999999999999 99999999998764 56778889999


Q ss_pred             cEEEEEecC--CEEEEeecCCeEEEEECcCC------C--ccceeeecCCcc----EEEEEEccCCcEEEEEe-cCeEEE
Q psy14511        286 QVIAMCWNG--NLLSCGTIGGNILHYDVRTH------S--DYPTAITREGDV----VCGLKWSPNGRYLASGS-NNTVKI  350 (488)
Q Consensus       286 ~v~~~~~~~--~~l~~~~~dg~i~i~d~~~~------~--~~~~~~~~~~~~----i~~~~~s~~~~~l~~~~-d~~i~i  350 (488)
                      .+.++++.+  .++++|+.||.+.|+.-.-.      .  .++..+.+|...    |....|+|...+|.+++ ||+|++
T Consensus       652 avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tirl  731 (733)
T KOG0650|consen  652 AVRSVAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIVPLKRLRGHEKTNDLGVLDTIWHPRQPWLFSAGADGTIRL  731 (733)
T ss_pred             hhhhhhhccccceeeeecCCCcEEEEeeeeehhhhcCCceEeeeeccCceeecccceEeecccCCCceEEecCCCceEEe
Confidence            999999954  68999999999998853221      1  245667788765    88889999999999888 699999


Q ss_pred             E
Q psy14511        351 W  351 (488)
Q Consensus       351 w  351 (488)
                      |
T Consensus       732 f  732 (733)
T KOG0650|consen  732 F  732 (733)
T ss_pred             e
Confidence            8

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.87  E-value=6e-18  Score=159.37  Aligned_cols=352  Identities=24%  Similarity=0.422  Sum_probs=248.3

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccceeecc-cCceEEEEEE-ccCCc-EEEEe-c-CCeEEEEeccccCcCCCcccccc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITR-EGDVVCGLKW-SPNGR-YLASG-S-NNTVKIWDFRQLDAKRPQVNNQC   78 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~-h~~~V~~l~~-sp~g~-~las~-~-d~~i~vwd~~~~~~~~~~~~~~~   78 (488)
                      ++..++.++.|+.+.+|+..........+.+ +...+..+.+ ++++. +++.. . |+.+.+|+...  .......+..
T Consensus        76 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--~~~~~~~~~~  153 (466)
T COG2319          76 DGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLWDLST--PGKLIRTLEG  153 (466)
T ss_pred             CCcEEEEecCCCcEEEEEcCCCceeEEEEeccCCCceeeEEEECCCcceEEeccCCCCccEEEEEecC--CCeEEEEEec
Confidence            6778888889999999999887622234444 3346777777 88888 44443 3 89999999875  1223344677


Q ss_pred             cccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccce
Q psy14511         79 HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKV  158 (488)
Q Consensus        79 h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (488)
                      |...|..++|+|+++.+++.+.  .|+.+++|++..+.....+..+...+....+.+.                      
T Consensus       154 ~~~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----------------------  209 (466)
T COG2319         154 HSESVTSLAFSPDGKLLASGSS--LDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPD----------------------  209 (466)
T ss_pred             CcccEEEEEECCCCCEEEecCC--CCCceEEEEcCCCceEEeeccCCCceEEEEEcCC----------------------
Confidence            9999999999999986666653  3999999999886666655554332222222110                      


Q ss_pred             eccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEE-ECCCeEEEEECCCCceEEEEecC
Q psy14511        159 LNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAV-ALDTSVYTWNTKTNKTQLLVEYP  237 (488)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~v~iw~~~~~~~~~~~~~~  237 (488)
                                                                       ...++++ +.|+.+++||...+..... ...
T Consensus       210 -------------------------------------------------~~~~~~~~~~d~~i~~wd~~~~~~~~~-~~~  239 (466)
T COG2319         210 -------------------------------------------------GGLLIASGSSDGTIRLWDLSTGKLLRS-TLS  239 (466)
T ss_pred             -------------------------------------------------cceEEEEecCCCcEEEEECCCCcEEee-ecC
Confidence                                                             1114444 6899999998886665552 222


Q ss_pred             CCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCccee-eeeeccccccEEEEEec--CCEEEEeecCCeEEEEECcCC
Q psy14511        238 TYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERL-IQKLRTHMHQVIAMCWN--GNLLSCGTIGGNILHYDVRTH  314 (488)
Q Consensus       238 ~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~-~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~  314 (488)
                      + |.... ...|+|++..++++ +.++.+++|+...... ...+..|...+.++.+.  +..+++++.|+.+.+||....
T Consensus       240 ~-~~~~~-~~~~~~~~~~~~~~-~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~  316 (466)
T COG2319         240 G-HSDSV-VSSFSPDGSLLASG-SSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETG  316 (466)
T ss_pred             C-CCcce-eEeECCCCCEEEEe-cCCCcEEEeeecCCCcEEEEEecCCccEEEEEECCCCCEEEEeeCCCcEEEEEcCCC
Confidence            2 44443 33899999777777 9999999999986554 44446788899999884  578888888988999988875


Q ss_pred             Cccceee-ecCCccEEEEEEccCCcEEEEE-e-cCeEEEEECCCCCCCcccce----eeeeecCCCCEEEEEccCCCCeE
Q psy14511        315 SDYPTAI-TREGDVVCGLKWSPNGRYLASG-S-NNTVKIWDFRQLDAKRPLGL----IVPKLKREGRELVTSHGKQDCSL  387 (488)
Q Consensus       315 ~~~~~~~-~~~~~~i~~~~~s~~~~~l~~~-~-d~~i~iwd~~~~~~~~~~~~----~~~~~~~~~~~l~~~~g~~~~~i  387 (488)
                      ....... ..|...+..+.|.+++..++.+ . |+.+.+|++...........    ....+++ . ......+..++.+
T Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~  394 (466)
T COG2319         317 KLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGHSNVLSVSFSP-D-GRVVSSGSTDGTV  394 (466)
T ss_pred             ceEEEeeecccCCceEEEEECCCCCEEEEeecCCCcEEeeecCCCceeEEecCCceEEEEEECC-C-CCEEEEecCCCce
Confidence            4322222 3677778999994343566665 3 58899999987751111111    1226666 4 3333235789999


Q ss_pred             EEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCC
Q psy14511        388 KMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFP  436 (488)
Q Consensus       388 ~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~  436 (488)
                      .+|+............+...+....+++++..+++++.++.+++|+...
T Consensus       395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  443 (466)
T COG2319         395 RLWDLSTGSLLRNLDGHTSRVTSLDFSPDGKSLASGSSDNTIRLWDLKT  443 (466)
T ss_pred             EEEecccCeeeeeccCCCCcEEEEEECCCCcEEEEecCCCcEEEEeccC
Confidence            9999998877766665547899999999999999999999999999988

>KOG0302|consensus

Probab=99.87  E-value=1.6e-20  Score=154.62  Aligned_cols=224  Identities=20%  Similarity=0.357  Sum_probs=168.0

Q ss_pred             CCceEEEeecCCeEEEEEcccCc---------------ccceeecccCceEEEEEEccCCc-EEEEec-CCeEEEEeccc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHS---------------DYPTAITREGDVVCGLKWSPNGR-YLASGS-NNTVKIWDFRQ   66 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~---------------~~~~~~~~h~~~V~~l~~sp~g~-~las~~-d~~i~vwd~~~   66 (488)
                      +..+.|+=+..|.|.|||+...-               .....+.+|...=.+|+|||-.. .|++|. -+.|++|...+
T Consensus       164 ~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~LlsGDc~~~I~lw~~~~  243 (440)
T KOG0302|consen  164 NEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGRLLSGDCVKGIHLWEPST  243 (440)
T ss_pred             CcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecccccccccccCccccceEeeeecc
Confidence            44566777889999999975311               12234678998889999999322 466776 79999999988


Q ss_pred             cCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEE
Q psy14511         67 LDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSF  146 (488)
Q Consensus        67 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (488)
                      +.-..-...+.+|+..|..|+|||..+.++++++-  |++|+|||++.+.....+                         
T Consensus       244 g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~--DgsIrIWDiRs~~~~~~~-------------------------  296 (440)
T KOG0302|consen  244 GSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSC--DGSIRIWDIRSGPKKAAV-------------------------  296 (440)
T ss_pred             CceeecCccccccccchhhhccCCccCceEEeeec--CceEEEEEecCCCcccee-------------------------
Confidence            76554455577899999999999999999988884  999999999877421100                         


Q ss_pred             EEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECC
Q psy14511        147 LLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTK  226 (488)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~  226 (488)
                                                                                                      
T Consensus       297 --------------------------------------------------------------------------------  296 (440)
T KOG0302|consen  297 --------------------------------------------------------------------------------  296 (440)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCc---ceeeeeeccccccEEEEEec---CCEEEEe
Q psy14511        227 TNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE---ERLIQKLRTHMHQVIAMCWN---GNLLSCG  300 (488)
Q Consensus       227 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~---~~~~~~~~~~~~~v~~~~~~---~~~l~~~  300 (488)
                           ..   .. |...|+.+.|+..-.+|++| +.||+++|||++.   ++++..++-|..+|+++.|.   ...|+++
T Consensus       297 -----~~---kA-h~sDVNVISWnr~~~lLasG-~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaas  366 (440)
T KOG0302|consen  297 -----ST---KA-HNSDVNVISWNRREPLLASG-GDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAAS  366 (440)
T ss_pred             -----Ee---ec-cCCceeeEEccCCcceeeec-CCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEec
Confidence                 00   11 78899999999988877777 9999999999875   56788999999999999994   7899999


Q ss_pred             ecCCeEEEEECcCCCc---------------cceeeecC--CccEEEEEEccCCc-EEEEEe
Q psy14511        301 TIGGNILHYDVRTHSD---------------YPTAITRE--GDVVCGLKWSPNGR-YLASGS  344 (488)
Q Consensus       301 ~~dg~i~i~d~~~~~~---------------~~~~~~~~--~~~i~~~~~s~~~~-~l~~~~  344 (488)
                      +.|.+|.+||+.....               +.+.+.-|  ...+..+.|++.-. +|++.+
T Consensus       367 g~D~QitiWDlsvE~D~ee~~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa  428 (440)
T KOG0302|consen  367 GEDNQITIWDLSVEADEEEIDQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTA  428 (440)
T ss_pred             cCCCcEEEEEeeccCChhhhccccccchhcCCceeEEEecchhHhhhheeccCCCCeEEEec
Confidence            9999999999864321               11222223  34577788887543 444443

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.87  E-value=1.7e-17  Score=156.36  Aligned_cols=350  Identities=25%  Similarity=0.424  Sum_probs=248.2

Q ss_pred             eecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccc-cceeEEEE-ecCCC-eEEeeeCCcccce
Q psy14511         31 AITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHL-SAVKAIAW-CPWEP-TLLATGGGICDQT  106 (488)
Q Consensus        31 ~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~-~~v~~l~~-~~~~~-~l~~~~~~~~d~~  106 (488)
                      ....|...+.++.|.+.+..++.++ |+.+.+|+.....  .....+.++. ..+..+.+ .+++. .++..+.  .|+.
T Consensus        60 ~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~  135 (466)
T COG2319          60 LLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGE--KLIKSLEGLHDSSVSKLALSSPDGNSILLASSS--LDGT  135 (466)
T ss_pred             eeeeccceEEEEEECCCCcEEEEecCCCcEEEEEcCCCc--eeEEEEeccCCCceeeEEEECCCcceEEeccCC--CCcc
Confidence            4568999999999999999999998 9999999998643  1233344433 36777777 78887 3333343  3899


Q ss_pred             EEEEecCC-CeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCC
Q psy14511        107 VRLWNSMN-GKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAK  185 (488)
Q Consensus       107 i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (488)
                      +.+|+... ......+..+...+..                                                       
T Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~v~~-------------------------------------------------------  160 (466)
T COG2319         136 VKLWDLSTPGKLIRTLEGHSESVTS-------------------------------------------------------  160 (466)
T ss_pred             EEEEEecCCCeEEEEEecCcccEEE-------------------------------------------------------
Confidence            99999987 5555555554332221                                                       


Q ss_pred             CceeecCCCccccceeeeeeeCC--CcEEEEEC-CCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCC
Q psy14511        186 PERILEAPSIINDFYTSGLDWGY--HDTLAVAL-DTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTC  262 (488)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~  262 (488)
                                        +.+.+  ..++.++. ++.+++|+...+.....+..   |...+.+++|+|++..++++++.
T Consensus       161 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~  219 (466)
T COG2319         161 ------------------LAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAG---HTDPVSSLAFSPDGGLLIASGSS  219 (466)
T ss_pred             ------------------EEECCCCCEEEecCCCCCceEEEEcCCCceEEeecc---CCCceEEEEEcCCcceEEEEecC
Confidence                              22222  23444443 99999999998666655554   78899999999999844444489


Q ss_pred             CCcEEEEECCcceeee-eeccccccE-EEEEecCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEE
Q psy14511        263 TEYIDLWHEQEERLIQ-KLRTHMHQV-IAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYL  340 (488)
Q Consensus       263 ~~~i~i~d~~~~~~~~-~~~~~~~~v-~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l  340 (488)
                      |+.+++||...+.... .+..|.... ..+..++..+++++.|+.+++|++............|...+.++.|+|++..+
T Consensus       220 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~  299 (466)
T COG2319         220 DGTIRLWDLSTGKLLRSTLSGHSDSVVSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLL  299 (466)
T ss_pred             CCcEEEEECCCCcEEeeecCCCCcceeEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEEecCCccEEEEEECCCCCEE
Confidence            9999999988777777 677777774 33333677888999999999999987654233346778899999999988888


Q ss_pred             EEEe-cCeEEEEECCCCCCCcccc-------eeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEE
Q psy14511        341 ASGS-NNTVKIWDFRQLDAKRPLG-------LIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAV  412 (488)
Q Consensus       341 ~~~~-d~~i~iwd~~~~~~~~~~~-------~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~  412 (488)
                      ++++ |+.+.+||...........       .....+.+++..++.. +..++.+.+|+............. ..+..+.
T Consensus       300 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~  377 (466)
T COG2319         300 ASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSG-GSDDGTIRLWDLRTGKPLKTLEGH-SNVLSVS  377 (466)
T ss_pred             EEeeCCCcEEEEEcCCCceEEEeeecccCCceEEEEECCCCCEEEEe-ecCCCcEEeeecCCCceeEEecCC-ceEEEEE
Confidence            8866 5789999888765433332       1111443333555553 366789999999887733333222 2288999


Q ss_pred             EcCCCCEEEE-EeCCCcEEEEecCCCCcccccccc-CCcceEEeecCCCceEE
Q psy14511        413 LSPDQTCVAA-ASADETISIWNCFPRDKKRKARQV-GSGSSLEFAILKQPVSL  463 (488)
Q Consensus       413 ~s~~~~~l~t-~~~dg~v~iw~~~~~~~~~~~~~~-~~v~~~~~s~~~~~~~~  463 (488)
                      +++ ...++. +..++.+.+|+............. ..+....+++++..+..
T Consensus       378 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  429 (466)
T COG2319         378 FSP-DGRVVSSGSTDGTVRLWDLSTGSLLRNLDGHTSRVTSLDFSPDGKSLAS  429 (466)
T ss_pred             ECC-CCCEEEEecCCCceEEEecccCeeeeeccCCCCcEEEEEECCCCcEEEE
Confidence            999 544444 689999999999988877555544 78888888888877644

>KOG2919|consensus

Probab=99.87  E-value=1.2e-19  Score=146.60  Aligned_cols=272  Identities=15%  Similarity=0.228  Sum_probs=192.6

Q ss_pred             cCCceEEEeecCCeEEEEEcccCc-------ccc-----eeecccCceEEEEEEc-------cCCcEEEEec-CCeEEEE
Q psy14511          3 WNGNLLSCGTIGGNILHYDVRTHS-------DYP-----TAITREGDVVCGLKWS-------PNGRYLASGS-NNTVKIW   62 (488)
Q Consensus         3 ~dg~~la~g~~dg~i~iwd~~~~~-------~~~-----~~~~~h~~~V~~l~~s-------p~g~~las~~-d~~i~vw   62 (488)
                      +||.-|++-+.|..+.+|++...-       ...     ...-.....|...+|-       |+..++|+.+ +.-|++|
T Consensus        59 PDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~ssr~~PIh~w  138 (406)
T KOG2919|consen   59 PDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVSSRDQPIHLW  138 (406)
T ss_pred             CCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeeccccCceeee
Confidence            499999999999999999986321       000     0111234567777775       5777888888 9999999


Q ss_pred             eccccCcCCCccccccccc---ceeEEEEecCCCeEEeeeCCcccceEEEEec-CCCeeeeeeecCCCcccccccccccc
Q psy14511         63 DFRQLDAKRPQVNNQCHLS---AVKAIAWCPWEPTLLATGGGICDQTVRLWNS-MNGKEKCHVKTDSQQANDETISYREQ  138 (488)
Q Consensus        63 d~~~~~~~~~~~~~~~h~~---~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~-~~~~~~~~~~~~~~~~~~~~~~~~~~  138 (488)
                      |.-+++...... ...|..   .-.+++|+|||.+|++ |-   .+.|+++|+ +.|...........            
T Consensus       139 daftG~lraSy~-~ydh~de~taAhsL~Fs~DGeqlfa-Gy---krcirvFdt~RpGr~c~vy~t~~~------------  201 (406)
T KOG2919|consen  139 DAFTGKLRASYR-AYDHQDEYTAAHSLQFSPDGEQLFA-GY---KRCIRVFDTSRPGRDCPVYTTVTK------------  201 (406)
T ss_pred             eccccccccchh-hhhhHHhhhhheeEEecCCCCeEee-cc---cceEEEeeccCCCCCCcchhhhhc------------
Confidence            999887554332 223443   4468999999998765 43   889999998 44542211111000            


Q ss_pred             ccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCC---CcEEEEE
Q psy14511        139 KKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGY---HDTLAVA  215 (488)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~  215 (488)
                                                                            .+....-.+.++.+++   ..+..++
T Consensus       202 ------------------------------------------------------~k~gq~giisc~a~sP~~~~~~a~gs  227 (406)
T KOG2919|consen  202 ------------------------------------------------------GKFGQKGIISCFAFSPMDSKTLAVGS  227 (406)
T ss_pred             ------------------------------------------------------ccccccceeeeeeccCCCCcceeeec
Confidence                                                                  0000011122233333   3455666


Q ss_pred             CCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcc-eeeeeeccccc-cEEEEEe-
Q psy14511        216 LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEE-RLIQKLRTHMH-QVIAMCW-  292 (488)
Q Consensus       216 ~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~-~~~~~~~~~~~-~v~~~~~-  292 (488)
                      ....+-||.-..+.+..++-  + |.+.|+.+.|.++|+.|++++-.+..|..||++.. .++..+..|.. .-..|-| 
T Consensus       228 Y~q~~giy~~~~~~pl~llg--g-h~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~L~rhv~~TNQRI~FD  304 (406)
T KOG2919|consen  228 YGQRVGIYNDDGRRPLQLLG--G-HGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVYALERHVGDTNQRILFD  304 (406)
T ss_pred             ccceeeeEecCCCCceeeec--c-cCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchhhhhhhhccCccceEEEe
Confidence            88889999888877666554  3 99999999999999999999778999999999864 45566666655 2233444 


Q ss_pred             ---cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeE
Q psy14511        293 ---NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTV  348 (488)
Q Consensus       293 ---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i  348 (488)
                         +++.|++|+.||.|++||++........+..+...++.++++|--.++|+++...+
T Consensus       305 ld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~~~~sd~vNgvslnP~mpilatssGqr~  363 (406)
T KOG2919|consen  305 LDPKGEILASGDTDGSVRVWDLKDLGNEVSVTGNYSDTVNGVSLNPIMPILATSSGQRI  363 (406)
T ss_pred             cCCCCceeeccCCCccEEEEecCCCCCcccccccccccccceecCcccceeeeccCcee
Confidence               68999999999999999999877778888889999999999999888888875433

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.86  E-value=1.1e-18  Score=156.36  Aligned_cols=275  Identities=11%  Similarity=0.061  Sum_probs=170.3

Q ss_pred             EEEeecCCeEEEEEcccCccc--ceeecccCceEEEEEEccCCcEEEEec--CCeEEEEeccccCcCCCcccccccccce
Q psy14511          8 LSCGTIGGNILHYDVRTHSDY--PTAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAKRPQVNNQCHLSAV   83 (488)
Q Consensus         8 la~g~~dg~i~iwd~~~~~~~--~~~~~~h~~~V~~l~~sp~g~~las~~--d~~i~vwd~~~~~~~~~~~~~~~h~~~v   83 (488)
                      +++...++.|.+||+.+...+  ...+ .+.+....++++|++++|++++  ++.|.+|++............ ...+..
T Consensus         5 y~~~~~~~~I~~~~~~~~g~l~~~~~~-~~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~-~~~~~p   82 (330)
T PRK11028          5 YIASPESQQIHVWNLNHEGALTLLQVV-DVPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAES-PLPGSP   82 (330)
T ss_pred             EEEcCCCCCEEEEEECCCCceeeeeEE-ecCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeee-cCCCCc
Confidence            344567999999999743222  2223 2345577899999999988775  799999999631111111111 123356


Q ss_pred             eEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecccc
Q psy14511         84 KAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSK  163 (488)
Q Consensus        84 ~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (488)
                      ..++|+|++++++++...  ++.|.+|++++......                                           
T Consensus        83 ~~i~~~~~g~~l~v~~~~--~~~v~v~~~~~~g~~~~-------------------------------------------  117 (330)
T PRK11028         83 THISTDHQGRFLFSASYN--ANCVSVSPLDKDGIPVA-------------------------------------------  117 (330)
T ss_pred             eEEEECCCCCEEEEEEcC--CCeEEEEEECCCCCCCC-------------------------------------------
Confidence            789999999998888764  89999999853211000                                           


Q ss_pred             ccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCc
Q psy14511        164 RTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAY  243 (488)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~  243 (488)
                                                                                        .....  +  ....
T Consensus       118 ------------------------------------------------------------------~~~~~--~--~~~~  127 (330)
T PRK11028        118 ------------------------------------------------------------------PIQII--E--GLEG  127 (330)
T ss_pred             ------------------------------------------------------------------ceeec--c--CCCc
Confidence                                                                              00000  0  1223


Q ss_pred             eEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeee-------eeccccccEEEEEe--cCCEEEEeec-CCeEEEEECcC
Q psy14511        244 ISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQ-------KLRTHMHQVIAMCW--NGNLLSCGTI-GGNILHYDVRT  313 (488)
Q Consensus       244 i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~-------~~~~~~~~v~~~~~--~~~~l~~~~~-dg~i~i~d~~~  313 (488)
                      ..+++++|++++++++...++.|.+||+.+...+.       .... ......+.+  ++++++++.. ++.|.+|++..
T Consensus       128 ~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~-g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~  206 (330)
T PRK11028        128 CHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVE-GAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKD  206 (330)
T ss_pred             ccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecCC-CCCCceEEECCCCCEEEEEecCCCEEEEEEEeC
Confidence            56788999999998875778999999997633221       1111 223345666  7888887776 89999999974


Q ss_pred             CC-c--cceeeecC------CccEEEEEEccCCcEEEEEe--cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccC
Q psy14511        314 HS-D--YPTAITRE------GDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGK  382 (488)
Q Consensus       314 ~~-~--~~~~~~~~------~~~i~~~~~s~~~~~l~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~  382 (488)
                      .. .  ....+...      ......+.++|++++++++.  ++.|.+|++....                         
T Consensus       207 ~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~-------------------------  261 (330)
T PRK11028        207 PHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDG-------------------------  261 (330)
T ss_pred             CCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCC-------------------------
Confidence            21 1  11111111      11223577888888877775  2667777664320                         


Q ss_pred             CCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeC-CCcEEEEecCC
Q psy14511        383 QDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASA-DETISIWNCFP  436 (488)
Q Consensus       383 ~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~-dg~v~iw~~~~  436 (488)
                        +.+        +.+..... ......+.++|||++|+++.. +++|.+|+++.
T Consensus       262 --~~~--------~~~~~~~~-~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~~  305 (330)
T PRK11028        262 --SVL--------SFEGHQPT-ETQPRGFNIDHSGKYLIAAGQKSHHISVYEIDG  305 (330)
T ss_pred             --CeE--------EEeEEEec-cccCCceEECCCCCEEEEEEccCCcEEEEEEcC
Confidence              000        11111111 123457899999999998775 89999998863

>KOG0649|consensus

Probab=99.86  E-value=2.7e-19  Score=138.81  Aligned_cols=279  Identities=17%  Similarity=0.250  Sum_probs=189.8

Q ss_pred             eEEEEEEccCCcEEEEec-CCeEEEEecccc-------CcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEE
Q psy14511         38 VVCGLKWSPNGRYLASGS-NNTVKIWDFRQL-------DAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRL  109 (488)
Q Consensus        38 ~V~~l~~sp~g~~las~~-d~~i~vwd~~~~-------~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~v  109 (488)
                      .|.+-+++|.+++|++|. +|.|.+..+++.       +.+.++...++|.++|..++|..  .+|++++    ||.|+=
T Consensus        12 tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~d--~~Lls~g----dG~V~g   85 (325)
T KOG0649|consen   12 TVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFHD--DFLLSGG----DGLVYG   85 (325)
T ss_pred             HHHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeeeh--hheeecc----CceEEE
Confidence            466778999999999998 999999998652       22334555688999999999993  3555555    999999


Q ss_pred             EecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCcee
Q psy14511        110 WNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERI  189 (488)
Q Consensus       110 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (488)
                      |.+.......                                                                      
T Consensus        86 w~W~E~~es~----------------------------------------------------------------------   95 (325)
T KOG0649|consen   86 WEWNEEEESL----------------------------------------------------------------------   95 (325)
T ss_pred             eeehhhhhhc----------------------------------------------------------------------
Confidence            9886543210                                                                      


Q ss_pred             ecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEE
Q psy14511        190 LEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLW  269 (488)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~  269 (488)
                                                  +.=++|...........     .-..|+++...|..+.++.+ +.|+.++-|
T Consensus        96 ----------------------------~~K~lwe~~~P~~~~~~-----evPeINam~ldP~enSi~~A-gGD~~~y~~  141 (325)
T KOG0649|consen   96 ----------------------------ATKRLWEVKIPMQVDAV-----EVPEINAMWLDPSENSILFA-GGDGVIYQV  141 (325)
T ss_pred             ----------------------------cchhhhhhcCccccCcc-----cCCccceeEeccCCCcEEEe-cCCeEEEEE
Confidence                                        11122332222111112     23468999999998888888 799999999


Q ss_pred             ECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeee---------cC-CccEEEEEEccCC
Q psy14511        270 HEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAIT---------RE-GDVVCGLKWSPNG  337 (488)
Q Consensus       270 d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---------~~-~~~i~~~~~s~~~  337 (488)
                      |+++++..+.+++|...+.++.-  ....+++|++||++++||.++.+ ....+.         .| ...|.+++.  +.
T Consensus       142 dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k-~v~~ie~yk~~~~lRp~~g~wigala~--~e  218 (325)
T KOG0649|consen  142 DLEDGRIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQK-HVSMIEPYKNPNLLRPDWGKWIGALAV--NE  218 (325)
T ss_pred             EecCCEEEEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccccc-eeEEeccccChhhcCcccCceeEEEec--cC
Confidence            99999999999999999999988  46789999999999999999865 333322         22 233555554  56


Q ss_pred             cEEEEEecCeEEEEECCCCCCCccccee--eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcC
Q psy14511        338 RYLASGSNNTVKIWDFRQLDAKRPLGLI--VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSP  415 (488)
Q Consensus       338 ~~l~~~~d~~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~  415 (488)
                      .+|++|+...+.+|.++..+....+...  +.....+.+.+++  ++..+.+.-|.+. |.+-...+..+...++..|+.
T Consensus       219 dWlvCGgGp~lslwhLrsse~t~vfpipa~v~~v~F~~d~vl~--~G~g~~v~~~~l~-Gvl~a~ip~~s~~c~s~s~~~  295 (325)
T KOG0649|consen  219 DWLVCGGGPKLSLWHLRSSESTCVFPIPARVHLVDFVDDCVLI--GGEGNHVQSYTLN-GVLQANIPVESTACYSASWQT  295 (325)
T ss_pred             ceEEecCCCceeEEeccCCCceEEEecccceeEeeeecceEEE--eccccceeeeeec-cEEEEeccCCccceeeecccC
Confidence            6899988899999999988655444332  3344445556666  5666677777654 333333333333455555544


Q ss_pred             CC-CEEEEEeCCCcEEEE
Q psy14511        416 DQ-TCVAAASADETISIW  432 (488)
Q Consensus       416 ~~-~~l~t~~~dg~v~iw  432 (488)
                      .. ++|-.++....+.|+
T Consensus       296 ~p~k~~s~ag~s~~~~i~  313 (325)
T KOG0649|consen  296 SPIKFISIAGFSNKLHIL  313 (325)
T ss_pred             CceEEEEecccceeeeee
Confidence            32 344445555555554

>KOG0290|consensus

Probab=99.86  E-value=1.2e-19  Score=144.48  Aligned_cols=178  Identities=15%  Similarity=0.274  Sum_probs=136.7

Q ss_pred             CCCceEEEEEcCCCC-eEEEEeCCCCcEEEEECCccee---eeeeccccccEEEEEe-c--CCEEEEeecCCeEEEEECc
Q psy14511        240 DNAYISCVAWKPRTT-DLAVTNTCTEYIDLWHEQEERL---IQKLRTHMHQVIAMCW-N--GNLLSCGTIGGNILHYDVR  312 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~-~l~~~~~~~~~i~i~d~~~~~~---~~~~~~~~~~v~~~~~-~--~~~l~~~~~dg~i~i~d~~  312 (488)
                      +..++++..|+.-.. ++.++ +-|-+..|||++++..   ...+-+|..+|..++| .  -+.+++.+.||.++++|++
T Consensus       149 ~~aPlTSFDWne~dp~~igtS-SiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR  227 (364)
T KOG0290|consen  149 FCAPLTSFDWNEVDPNLIGTS-SIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLR  227 (364)
T ss_pred             cCCcccccccccCCcceeEee-cccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEec
Confidence            667889999987554 55555 9999999999998633   5567789999999999 2  4789999999999999999


Q ss_pred             CCCccceeeec--CCccEEEEEEccCC-cEEEEEe-c-CeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeE
Q psy14511        313 THSDYPTAITR--EGDVVCGLKWSPNG-RYLASGS-N-NTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSL  387 (488)
Q Consensus       313 ~~~~~~~~~~~--~~~~i~~~~~s~~~-~~l~~~~-d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i  387 (488)
                      ...........  ...+...++|++.. +++|+-. | ..|.|.|++..                               
T Consensus       228 ~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P-------------------------------  276 (364)
T KOG0290|consen  228 SLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVP-------------------------------  276 (364)
T ss_pred             ccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCC-------------------------------
Confidence            86533333322  24567788888744 5677655 4 66777776643                               


Q ss_pred             EEEeCCCcceeEEEeeccccEEEEEEcCC-CCEEEEEeCCCcEEEEecCCCCc------cccccccCCcceEEeec
Q psy14511        388 KMWEYPRLHLIEELKIHQERILSAVLSPD-QTCVAAASADETISIWNCFPRDK------KRKARQVGSGSSLEFAI  456 (488)
Q Consensus       388 ~i~d~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~t~~~dg~v~iw~~~~~~~------~~~~~~~~~v~~~~~s~  456 (488)
                             ..++.++++|.+.|+.++|.|. ...|.|++.|..+.+||+.+...      +......++|..+.|++
T Consensus       277 -------~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dPilay~a~~EVNqi~Ws~  345 (364)
T KOG0290|consen  277 -------CTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDPILAYTAGGEVNQIQWSS  345 (364)
T ss_pred             -------CcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccccCCCCchhhhhccceeeeeeecc
Confidence                   3567899999999999999995 56899999999999999986544      12234678899999996

>KOG0649|consensus

Probab=99.86  E-value=1.7e-18  Score=134.39  Aligned_cols=267  Identities=16%  Similarity=0.219  Sum_probs=187.9

Q ss_pred             ccCCceEEEeecCCeEEEEEccc---------CcccceeecccCceEEEEEEccCCcEEEEecCCeEEEEeccccCcC--
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRT---------HSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAK--   70 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~---------~~~~~~~~~~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~--   70 (488)
                      +..+++|++|..+|.|.+..+++         ++......++|.++|..++|.  .++|.+++||.|+=|..+.....  
T Consensus        19 sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~--d~~Lls~gdG~V~gw~W~E~~es~~   96 (325)
T KOG0649|consen   19 SPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFH--DDFLLSGGDGLVYGWEWNEEEESLA   96 (325)
T ss_pred             CCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeee--hhheeeccCceEEEeeehhhhhhcc
Confidence            34789999999999999998864         121222347999999999999  66899999999999988653221  


Q ss_pred             -CCccc--ccccc-----cceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccce
Q psy14511         71 -RPQVN--NQCHL-----SAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRR  142 (488)
Q Consensus        71 -~~~~~--~~~h~-----~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (488)
                       +++.+  ...|.     -.|+++...|....++.+++   |+.+.-||+++|+..+.+++|...+.++..         
T Consensus        97 ~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgG---D~~~y~~dlE~G~i~r~~rGHtDYvH~vv~---------  164 (325)
T KOG0649|consen   97 TKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGG---DGVIYQVDLEDGRIQREYRGHTDYVHSVVG---------  164 (325)
T ss_pred             chhhhhhcCccccCcccCCccceeEeccCCCcEEEecC---CeEEEEEEecCCEEEEEEcCCcceeeeeee---------
Confidence             11111  11122     36889999998888888887   999999999999999999998553322221         


Q ss_pred             eEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEE
Q psy14511        143 HLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYT  222 (488)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i  222 (488)
                                                                                    .-..+++++++.||++++
T Consensus       165 --------------------------------------------------------------R~~~~qilsG~EDGtvRv  182 (325)
T KOG0649|consen  165 --------------------------------------------------------------RNANGQILSGAEDGTVRV  182 (325)
T ss_pred             --------------------------------------------------------------cccCcceeecCCCccEEE
Confidence                                                                          012468999999999999


Q ss_pred             EECCCCceEEEEecCC-------CCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEecCC
Q psy14511        223 WNTKTNKTQLLVEYPT-------YDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGN  295 (488)
Q Consensus       223 w~~~~~~~~~~~~~~~-------~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~  295 (488)
                      ||.++++....+....       .....|.+++.+  ..+++++  ....+.+|.++..++...+. ...++..+.|..+
T Consensus       183 Wd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~~--edWlvCG--gGp~lslwhLrsse~t~vfp-ipa~v~~v~F~~d  257 (325)
T KOG0649|consen  183 WDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAVN--EDWLVCG--GGPKLSLWHLRSSESTCVFP-IPARVHLVDFVDD  257 (325)
T ss_pred             EeccccceeEEeccccChhhcCcccCceeEEEecc--CceEEec--CCCceeEEeccCCCceEEEe-cccceeEeeeecc
Confidence            9999999888776432       022345666654  4577776  56789999999988877774 4667888999999


Q ss_pred             EEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCC-cEEEEEec-CeEEEE
Q psy14511        296 LLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNG-RYLASGSN-NTVKIW  351 (488)
Q Consensus       296 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~d-~~i~iw  351 (488)
                      .+++++..+.+.-|.+..  .............++..|+..- ++|..++. ..+.|+
T Consensus       258 ~vl~~G~g~~v~~~~l~G--vl~a~ip~~s~~c~s~s~~~~p~k~~s~ag~s~~~~i~  313 (325)
T KOG0649|consen  258 CVLIGGEGNHVQSYTLNG--VLQANIPVESTACYSASWQTSPIKFISIAGFSNKLHIL  313 (325)
T ss_pred             eEEEeccccceeeeeecc--EEEEeccCCccceeeecccCCceEEEEecccceeeeee
Confidence            999999999999998864  2223333333334445554333 33333332 555554

>KOG1310|consensus

Probab=99.86  E-value=8.5e-20  Score=157.83  Aligned_cols=179  Identities=18%  Similarity=0.362  Sum_probs=113.8

Q ss_pred             eeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecC-CCeEEeeeCCcccceE
Q psy14511         30 TAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPW-EPTLLATGGGICDQTV  107 (488)
Q Consensus        30 ~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~-~~~l~~~~~~~~d~~i  107 (488)
                      ..+.||++.|.|++|+.+|.+|++|+ |-.+.|||.-..+....  .-.+|.+.|.++.|-|. +..++++|.+  |..|
T Consensus        44 ~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~Kllhs--I~TgHtaNIFsvKFvP~tnnriv~sgAg--Dk~i  119 (758)
T KOG1310|consen   44 AELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHS--ISTGHTANIFSVKFVPYTNNRIVLSGAG--DKLI  119 (758)
T ss_pred             hhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeee--eecccccceeEEeeeccCCCeEEEeccC--cceE
Confidence            45789999999999999999999999 89999999875332222  24689999999999884 3456666664  9999


Q ss_pred             EEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCc
Q psy14511        108 RLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPE  187 (488)
Q Consensus       108 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (488)
                      +++|+...+.-..-  +........+...                ....+.++.                          
T Consensus       120 ~lfdl~~~~~~~~d--~~~~~~~~~~~ch----------------t~rVKria~--------------------------  155 (758)
T KOG1310|consen  120 KLFDLDSSKEGGMD--HGMEETTRCWSCH----------------TDRVKRIAT--------------------------  155 (758)
T ss_pred             EEEecccccccccc--cCccchhhhhhhh----------------hhhhhheec--------------------------
Confidence            99999754321100  0000000000000                000000110                          


Q ss_pred             eeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceE--------EEEecCCCCCCceEEEEEcCCCCeEEEE
Q psy14511        188 RILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQ--------LLVEYPTYDNAYISCVAWKPRTTDLAVT  259 (488)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~--------~~~~~~~~~~~~i~~~~~~~~~~~l~~~  259 (488)
                                      ..-.++.+.+++.||.++-+|++....-        ....... .--...|+..+|...+.++.
T Consensus       156 ----------------~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~~-~lielk~ltisp~rp~~laV  218 (758)
T KOG1310|consen  156 ----------------APNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYNP-QLIELKCLTISPSRPYYLAV  218 (758)
T ss_pred             ----------------CCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhch-hhheeeeeeecCCCCceEEe
Confidence                            0112467899999999999999863211        0111111 22456789999987554444


Q ss_pred             eCCCCcEEEEECCc
Q psy14511        260 NTCTEYIDLWHEQE  273 (488)
Q Consensus       260 ~~~~~~i~i~d~~~  273 (488)
                      |+.+...++||.+.
T Consensus       219 GgsdpfarLYD~Rr  232 (758)
T KOG1310|consen  219 GGSDPFARLYDRRR  232 (758)
T ss_pred             cCCCchhhhhhhhh
Confidence            49999999999643

>KOG1538|consensus

Probab=99.86  E-value=1.4e-19  Score=160.11  Aligned_cols=269  Identities=17%  Similarity=0.320  Sum_probs=204.2

Q ss_pred             eEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCee
Q psy14511         38 VVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKE  117 (488)
Q Consensus        38 ~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~  117 (488)
                      .|..++|-|||..|+.+.+..+.+||.+.|.   .+.++++|...|.+++|+.||+.+++.++   |+.+.+|+..-.. 
T Consensus        14 ci~d~afkPDGsqL~lAAg~rlliyD~ndG~---llqtLKgHKDtVycVAys~dGkrFASG~a---DK~VI~W~~klEG-   86 (1081)
T KOG1538|consen   14 CINDIAFKPDGTQLILAAGSRLLVYDTSDGT---LLQPLKGHKDTVYCVAYAKDGKRFASGSA---DKSVIIWTSKLEG-   86 (1081)
T ss_pred             chheeEECCCCceEEEecCCEEEEEeCCCcc---cccccccccceEEEEEEccCCceeccCCC---ceeEEEecccccc-
Confidence            7999999999999999999999999998855   45568999999999999999986555554   9999999842111 


Q ss_pred             eeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccc
Q psy14511        118 KCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIIN  197 (488)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (488)
                                                                                                      
T Consensus        87 --------------------------------------------------------------------------------   86 (1081)
T KOG1538|consen   87 --------------------------------------------------------------------------------   86 (1081)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceee
Q psy14511        198 DFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLI  277 (488)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~  277 (488)
                                                         ++...  |...|.|+.|+|-...++++ + -...-+|...... +
T Consensus        87 -----------------------------------~LkYS--H~D~IQCMsFNP~~h~LasC-s-LsdFglWS~~qK~-V  126 (1081)
T KOG1538|consen   87 -----------------------------------ILKYS--HNDAIQCMSFNPITHQLASC-S-LSDFGLWSPEQKS-V  126 (1081)
T ss_pred             -----------------------------------eeeec--cCCeeeEeecCchHHHhhhc-c-hhhccccChhhhh-H
Confidence                                               01111  88899999999999888887 3 3346678765532 2


Q ss_pred             eeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCc-cceeeecCCccEEEEEEccCC-----cEEEEEe-cCeE
Q psy14511        278 QKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSD-YPTAITREGDVVCGLKWSPNG-----RYLASGS-NNTV  348 (488)
Q Consensus       278 ~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~i~~~~~s~~~-----~~l~~~~-d~~i  348 (488)
                      ...+ ....+.+.+|  ||++++.|-.+|+|.+-+-..... .+....+.+++|++++|+|..     ..+++.. ..++
T Consensus       127 ~K~k-ss~R~~~CsWtnDGqylalG~~nGTIsiRNk~gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTL  205 (1081)
T KOG1538|consen  127 SKHK-SSSRIICCSWTNDGQYLALGMFNGTISIRNKNGEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTL  205 (1081)
T ss_pred             Hhhh-hheeEEEeeecCCCcEEEEeccCceEEeecCCCCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEecccee
Confidence            2221 3456788888  799999999999999986544221 122233478899999999964     4666666 4888


Q ss_pred             EEEECCCCCCC--cc--cceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEe
Q psy14511        349 KIWDFRQLDAK--RP--LGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAAS  424 (488)
Q Consensus       349 ~iwd~~~~~~~--~~--~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~  424 (488)
                      .++.+......  +.  +....-.+.++|.+++.  |+.|+.+++|- +.|-.+.++......|+.++..|++++++.|.
T Consensus       206 SFy~LsG~~Igk~r~L~FdP~CisYf~NGEy~Li--GGsdk~L~~fT-R~GvrLGTvg~~D~WIWtV~~~PNsQ~v~~GC  282 (1081)
T KOG1538|consen  206 SFYQLSGKQIGKDRALNFDPCCISYFTNGEYILL--GGSDKQLSLFT-RDGVRLGTVGEQDSWIWTVQAKPNSQYVVVGC  282 (1081)
T ss_pred             EEEEecceeecccccCCCCchhheeccCCcEEEE--ccCCCceEEEe-ecCeEEeeccccceeEEEEEEccCCceEEEEE
Confidence            88887643211  11  22223378899999999  89999999996 45777778777788999999999999999999


Q ss_pred             CCCcEEEEecCCC
Q psy14511        425 ADETISIWNCFPR  437 (488)
Q Consensus       425 ~dg~v~iw~~~~~  437 (488)
                      .||+|.-|++...
T Consensus       283 qDGTiACyNl~fS  295 (1081)
T KOG1538|consen  283 QDGTIACYNLIFS  295 (1081)
T ss_pred             ccCeeehhhhHHh
Confidence            9999999998643

>KOG1963|consensus

Probab=99.86  E-value=8.9e-19  Score=160.16  Aligned_cols=328  Identities=16%  Similarity=0.178  Sum_probs=219.2

Q ss_pred             CccCCceEEEeecCCeEEEEEccc---CcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccc
Q psy14511          1 MCWNGNLLSCGTIGGNILHYDVRT---HSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNN   76 (488)
Q Consensus         1 ~~~dg~~la~g~~dg~i~iwd~~~---~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~   76 (488)
                      |+.+++++|+|..||.|.+|.--.   ...-.+.+.-|.+.|.+++|+++|.+|.+|+ .+.+.+|.+++++ ++.   +
T Consensus       213 ~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~-kqf---L  288 (792)
T KOG1963|consen  213 LSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGK-KQF---L  288 (792)
T ss_pred             eccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeecCCC-ccc---c
Confidence            467999999999999999996433   2233567888999999999999999999999 9999999999866 222   3


Q ss_pred             cccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeecccc
Q psy14511         77 QCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRK  156 (488)
Q Consensus        77 ~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (488)
                      .--.++|..+.++||+.+......   |+.|.+-...+......+.+.........                        
T Consensus       289 PRLgs~I~~i~vS~ds~~~sl~~~---DNqI~li~~~dl~~k~tIsgi~~~~~~~k------------------------  341 (792)
T KOG1963|consen  289 PRLGSPILHIVVSPDSDLYSLVLE---DNQIHLIKASDLEIKSTISGIKPPTPSTK------------------------  341 (792)
T ss_pred             cccCCeeEEEEEcCCCCeEEEEec---CceEEEEeccchhhhhhccCccCCCcccc------------------------
Confidence            335689999999999988777776   99999998877665555444322100000                        


Q ss_pred             ceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEec
Q psy14511        157 KVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEY  236 (488)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~  236 (488)
                                                 ..         ...-....+++...+.++..+..+.|.+||+.+.+.+..+..
T Consensus       342 ---------------------------~~---------~~~l~t~~~idpr~~~~vln~~~g~vQ~ydl~td~~i~~~~v  385 (792)
T KOG1963|consen  342 ---------------------------TR---------PQSLTTGVSIDPRTNSLVLNGHPGHVQFYDLYTDSTIYKLQV  385 (792)
T ss_pred             ---------------------------cc---------ccccceeEEEcCCCCceeecCCCceEEEEeccccceeeeEEE
Confidence                                       00         000011112333346677778899999999988776554432


Q ss_pred             CC--------CCCCceEEEEEcCCCCeEEEEe-------CC--CCcEEEEECCccee----eee-eccccccEEEEEe--
Q psy14511        237 PT--------YDNAYISCVAWKPRTTDLAVTN-------TC--TEYIDLWHEQEERL----IQK-LRTHMHQVIAMCW--  292 (488)
Q Consensus       237 ~~--------~~~~~i~~~~~~~~~~~l~~~~-------~~--~~~i~i~d~~~~~~----~~~-~~~~~~~v~~~~~--  292 (488)
                      ..        .+...++.++.+-.|.++++.-       ..  .-.+++|-......    ... ...|...+.+.++  
T Consensus       386 ~~~n~~~~~~n~~v~itav~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~~~kt~~L~T~I~~PH~~~~vat~~~~  465 (792)
T KOG1963|consen  386 CDENYSDGDVNIQVGITAVARSRFGSWMATLEARIDKFNFFDGEVSLKFWQYNPNSKTFILNTKINNPHGNAFVATIFLN  465 (792)
T ss_pred             EeecccCCcceeEEeeeeehhhccceEEEEeeeeehhhhccCceEEEEEEEEcCCcceeEEEEEEecCCCceeEEEEEec
Confidence            11        0233577788888888888761       12  23577886544322    222 2357776666666  


Q ss_pred             --cCCEEEEeecCCeEEEEECcCCCc---------cceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCC-CCc
Q psy14511        293 --NGNLLSCGTIGGNILHYDVRTHSD---------YPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLD-AKR  360 (488)
Q Consensus       293 --~~~~l~~~~~dg~i~i~d~~~~~~---------~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~-~~~  360 (488)
                        ....+++++.||.+++|-+...+.         +...-.-|..++..++|+.||..|+.+.++.|.+||..+.. ...
T Consensus       466 ~~rs~~~vta~~dg~~KiW~~~~~~n~~k~~s~W~c~~i~sy~k~~i~a~~fs~dGslla~s~~~~Itiwd~~~~~~l~~  545 (792)
T KOG1963|consen  466 PTRSVRCVTASVDGDFKIWVFTDDSNIYKKSSNWTCKAIGSYHKTPITALCFSQDGSLLAVSFDDTITIWDYDTKNELLC  545 (792)
T ss_pred             CcccceeEEeccCCeEEEEEEecccccCcCccceEEeeeeccccCcccchhhcCCCcEEEEecCCEEEEecCCChhhhhc
Confidence              234889999999999999843321         22222347888999999999999999999999999999842 211


Q ss_pred             cccee---ee------eecCCCCEEEEEccCCCCeEEEEeCCCcceeE
Q psy14511        361 PLGLI---VP------KLKREGRELVTSHGKQDCSLKMWEYPRLHLIE  399 (488)
Q Consensus       361 ~~~~~---~~------~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~  399 (488)
                      .....   ..      ....++....    .....+.+|++-++....
T Consensus       546 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~WNll~~~l~w  589 (792)
T KOG1963|consen  546 TEGSRNWPIAELLFTAQTQNDGALVH----ATQQRLSVWNLLSMSLIW  589 (792)
T ss_pred             cccccccchHhHhhhcccccccceee----ccCceEehHhhhhhheec
Confidence            11111   00      1222333332    346778999988776554

>KOG4227|consensus

Probab=99.85  E-value=5.9e-19  Score=146.41  Aligned_cols=314  Identities=14%  Similarity=0.207  Sum_probs=205.4

Q ss_pred             ecccCceEEEEEEccCCcEEEEec-CCeEEEEecccc---CcCCCcccc-cccccceeEEEEecCCCeEEeeeCCcccce
Q psy14511         32 ITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQL---DAKRPQVNN-QCHLSAVKAIAWCPWEPTLLATGGGICDQT  106 (488)
Q Consensus        32 ~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~---~~~~~~~~~-~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~  106 (488)
                      +.+|.+.|.++.||.++++||+|+ |..+++|.++..   +..+++... ..|...|.|++|.....++++.+.   +++
T Consensus        52 ~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~---~~~  128 (609)
T KOG4227|consen   52 VREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGER---WGT  128 (609)
T ss_pred             hhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCC---cce
Confidence            468999999999999999999999 899999998742   222344332 346789999999987766555554   999


Q ss_pred             EEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCC
Q psy14511        107 VRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKP  186 (488)
Q Consensus       107 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (488)
                      |...|+++.+.+..+.......                                                          
T Consensus       129 VI~HDiEt~qsi~V~~~~~~~~----------------------------------------------------------  150 (609)
T KOG4227|consen  129 VIKHDIETKQSIYVANENNNRG----------------------------------------------------------  150 (609)
T ss_pred             eEeeecccceeeeeecccCccc----------------------------------------------------------
Confidence            9999999887665544331100                                                          


Q ss_pred             ceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCc-eEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCc
Q psy14511        187 ERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNK-TQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEY  265 (488)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~  265 (488)
                                 +.+-.......+.+++.+.++.|.+||.+..+ ....+-... .......+.|+|....|+...+..+.
T Consensus       151 -----------~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN-~~~~F~t~~F~P~~P~Li~~~~~~~G  218 (609)
T KOG4227|consen  151 -----------DVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPAN-SGKNFYTAEFHPETPALILVNSETGG  218 (609)
T ss_pred             -----------ceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecC-CCccceeeeecCCCceeEEeccccCC
Confidence                       00111111123567778899999999998765 333333332 56678889999988766665588899


Q ss_pred             EEEEECCccee-eeee------ccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCC------ccEEE
Q psy14511        266 IDLWHEQEERL-IQKL------RTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREG------DVVCG  330 (488)
Q Consensus       266 i~i~d~~~~~~-~~~~------~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~------~~i~~  330 (488)
                      +.+||.+.... +...      +.....-....|  +|+.+++--....-.+||+.....++..+....      ..+.+
T Consensus       219 ~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~~V~k~D~N~~GY~N~~T~KS  298 (609)
T KOG4227|consen  219 PNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQRCFVLKSDHNPNGYCNIKTIKS  298 (609)
T ss_pred             CCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCCEEeeeecccceeEeccCCCCcceeeeeeee
Confidence            99999876432 1111      111122244556  677777776666667788877544443333211      24567


Q ss_pred             EEEccCCcEEEEEec-CeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEE
Q psy14511        331 LKWSPNGRYLASGSN-NTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERIL  409 (488)
Q Consensus       331 ~~~s~~~~~l~~~~d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~  409 (488)
                      ++|--|. .+++|+| -.|++|.+......--+..+    ..+...+       ...|.|     .+.+..+++|.+-++
T Consensus       299 ~~F~~D~-~v~tGSD~~~i~~WklP~~~ds~G~~~I----G~~~~~~-------~~~~~i-----~~~~~VLrGHRSv~N  361 (609)
T KOG4227|consen  299 MTFIDDY-TVATGSDHWGIHIWKLPRANDSYGFTQI----GHDEEEM-------PSEIFI-----EKELTVLRGHRSVPN  361 (609)
T ss_pred             eeeecce-eeeccCcccceEEEecCCCccccCcccc----CcchhhC-------chhhee-----cceeEEEeccccccc
Confidence            7776544 4889996 88999998744211100000    0000000       000111     234678899999999


Q ss_pred             EEEEcCCCCEEEEEeCCCcEEEEecC
Q psy14511        410 SAVLSPDQTCVAAASADETISIWNCF  435 (488)
Q Consensus       410 ~~~~s~~~~~l~t~~~dg~v~iw~~~  435 (488)
                      .+.|+|...+|++.+....+++|.-.
T Consensus       362 QVRF~~H~~~l~SSGVE~~~KlWS~~  387 (609)
T KOG4227|consen  362 QVRFSQHNNLLVSSGVENSFKLWSDH  387 (609)
T ss_pred             ceeecCCcceEeccchhhheeccccc
Confidence            99999999999999999999999754

>KOG1587|consensus

Probab=99.85  E-value=4.9e-19  Score=161.42  Aligned_cols=275  Identities=17%  Similarity=0.260  Sum_probs=190.3

Q ss_pred             CCeEEEEEcccCcccceeecccCceEEEEEEccC-CcEEEEec-CCeEEEEeccccCcC--CCcc-cccccccceeEEEE
Q psy14511         14 GGNILHYDVRTHSDYPTAITREGDVVCGLKWSPN-GRYLASGS-NNTVKIWDFRQLDAK--RPQV-NNQCHLSAVKAIAW   88 (488)
Q Consensus        14 dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~-g~~las~~-d~~i~vwd~~~~~~~--~~~~-~~~~h~~~v~~l~~   88 (488)
                      ++.+.||+++... .+...-.-...|+|++|+|. ..+||.|. +|.|.+||+..+...  ..+. ....|..+++.+.|
T Consensus       221 ~~~~~vW~~~~p~-~Pe~~~~~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW  299 (555)
T KOG1587|consen  221 DGVLLVWSLKNPN-TPELVLESPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVW  299 (555)
T ss_pred             CceEEEEecCCCC-CceEEEecCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEE
Confidence            3579999999874 34444556678999999995 55666665 999999999876542  2221 23458899999999


Q ss_pred             ecCCCe--EEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccc
Q psy14511         89 CPWEPT--LLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTV  166 (488)
Q Consensus        89 ~~~~~~--l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (488)
                      ..+...  +++++.   ||.|..|+++.-..............                                     
T Consensus       300 ~~~~~~~~f~s~ss---DG~i~~W~~~~l~~P~e~~~~~~~~~-------------------------------------  339 (555)
T KOG1587|consen  300 LQNEHNTEFFSLSS---DGSICSWDTDMLSLPVEGLLLESKKH-------------------------------------  339 (555)
T ss_pred             eccCCCCceEEEec---CCcEeeeeccccccchhhcccccccc-------------------------------------
Confidence            776554  788887   99999998764433211111100000                                     


Q ss_pred             cceeeecccccccccccCCCceeecCCCccccceeeeeee---CCCcEEEEECCCeEEEEECCCCceEE------EEecC
Q psy14511        167 SPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDW---GYHDTLAVALDTSVYTWNTKTNKTQL------LVEYP  237 (488)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~d~~v~iw~~~~~~~~~------~~~~~  237 (488)
                                              .............+.|   .+..+++|+.+|.|..-+-...+...      .....
T Consensus       340 ------------------------~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~  395 (555)
T KOG1587|consen  340 ------------------------KGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFI  395 (555)
T ss_pred             ------------------------cccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCccccccccccccccc
Confidence                                    0000000111112222   35789999999999884433322211      11222


Q ss_pred             CCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECC-cceeeeeeccccccEEEEEe---cCCEEEEeecCCeEEEEECcC
Q psy14511        238 TYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQ-EERLIQKLRTHMHQVIAMCW---NGNLLSCGTIGGNILHYDVRT  313 (488)
Q Consensus       238 ~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~-~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~i~d~~~  313 (488)
                      . |.++|+++.++|-+..++.+ +.|.+++||... ...++..+..+...+++++|   ....++++..+|.+.+||+..
T Consensus       396 ~-h~g~v~~v~~nPF~~k~fls-~gDW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~  473 (555)
T KOG1587|consen  396 T-HIGPVYAVSRNPFYPKNFLS-VGDWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQ  473 (555)
T ss_pred             c-cCcceEeeecCCCccceeee-eccceeEeccccCCCCcchhhhhccceeeeeEEcCcCceEEEEEcCCCceehhhhhc
Confidence            2 88999999999999888777 559999999987 66777778888888999999   467899999999999999976


Q ss_pred             CC-ccceeeecCCccEEEEEEccCCcEEEEEec-CeEEEEECCC
Q psy14511        314 HS-DYPTAITREGDVVCGLKWSPNGRYLASGSN-NTVKIWDFRQ  355 (488)
Q Consensus       314 ~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d-~~i~iwd~~~  355 (488)
                      .. .+......+....+.+.|+++|+.|++|.+ |.+.+|++..
T Consensus       474 ~~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~  517 (555)
T KOG1587|consen  474 DDEEPVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKLSE  517 (555)
T ss_pred             cccCCcccccccccccceeecCCCCcEEEEecCCCcEEEEEcCc
Confidence            43 344444444666788899999999999996 9999999963

>KOG0307|consensus

Probab=99.85  E-value=1.3e-20  Score=176.73  Aligned_cols=233  Identities=21%  Similarity=0.430  Sum_probs=179.5

Q ss_pred             eEEEeecCCeEEEEEcccC---c--ccceeecccCceEEEEEEccCCc-EEEEec-CCeEEEEeccccCcCCCccccccc
Q psy14511          7 LLSCGTIGGNILHYDVRTH---S--DYPTAITREGDVVCGLKWSPNGR-YLASGS-NNTVKIWDFRQLDAKRPQVNNQCH   79 (488)
Q Consensus         7 ~la~g~~dg~i~iwd~~~~---~--~~~~~~~~h~~~V~~l~~sp~g~-~las~~-d~~i~vwd~~~~~~~~~~~~~~~h   79 (488)
                      +||.|..||.|.+||...-   .  .+......|.+.|..+.|++... +||+|+ ||.|.|||++..+...... -..-
T Consensus        82 lIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~-~~~~  160 (1049)
T KOG0307|consen   82 LIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPG-SQAP  160 (1049)
T ss_pred             eeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCC-CCCC
Confidence            5899999999999998752   1  22345678999999999999655 999998 9999999998744333221 1224


Q ss_pred             ccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeecccccee
Q psy14511         80 LSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVL  159 (488)
Q Consensus        80 ~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (488)
                      .+.|.+++|+..-..++++++.  +|.+.|||++..+.+-.+...                                   
T Consensus       161 ~~eI~~lsWNrkvqhILAS~s~--sg~~~iWDlr~~~pii~ls~~-----------------------------------  203 (1049)
T KOG0307|consen  161 PSEIKCLSWNRKVSHILASGSP--SGRAVIWDLRKKKPIIKLSDT-----------------------------------  203 (1049)
T ss_pred             cccceEeccchhhhHHhhccCC--CCCceeccccCCCcccccccC-----------------------------------
Confidence            5789999999888888888874  889999999866532221111                                   


Q ss_pred             ccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCC
Q psy14511        160 NQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTY  239 (488)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~  239 (488)
                                                                                                    + 
T Consensus       204 ------------------------------------------------------------------------------~-  204 (1049)
T KOG0307|consen  204 ------------------------------------------------------------------------------P-  204 (1049)
T ss_pred             ------------------------------------------------------------------------------C-
Confidence                                                                                          0 


Q ss_pred             CCCceEEEEEcCCCC-eEEEEeCCC--CcEEEEECCc-ceeeeeeccccccEEEEEe---cCCEEEEeecCCeEEEEECc
Q psy14511        240 DNAYISCVAWKPRTT-DLAVTNTCT--EYIDLWHEQE-ERLIQKLRTHMHQVIAMCW---NGNLLSCGTIGGNILHYDVR  312 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~-~l~~~~~~~--~~i~i~d~~~-~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~i~d~~  312 (488)
                      ....+..++|+|+.. .++++...|  -.|.+||++. ...++.+++|...|.+++|   |..++++++.|+.|.+|+.+
T Consensus       205 ~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~  284 (1049)
T KOG0307|consen  205 GRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPN  284 (1049)
T ss_pred             CccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCC
Confidence            224577899999873 444442333  3799999876 3567788999999999999   67999999999999999999


Q ss_pred             CCCccceeeecCCccEEEEEEccCCc-EEEEEe-cCeEEEEECCCCC
Q psy14511        313 THSDYPTAITREGDVVCGLKWSPNGR-YLASGS-NNTVKIWDFRQLD  357 (488)
Q Consensus       313 ~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~-d~~i~iwd~~~~~  357 (488)
                      ++ +.+..+....+.+..+.|+|... .+++++ ||.|.||.+....
T Consensus       285 tg-Evl~~~p~~~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~~~~  330 (1049)
T KOG0307|consen  285 TG-EVLGELPAQGNWCFDVQWCPRNPSVMAAASFDGKISIYSLQGTD  330 (1049)
T ss_pred             Cc-eEeeecCCCCcceeeeeecCCCcchhhhheeccceeeeeeecCC
Confidence            96 46677777888899999999776 666666 7999999998653

>KOG0303|consensus

Probab=99.84  E-value=1.1e-18  Score=144.91  Aligned_cols=206  Identities=17%  Similarity=0.304  Sum_probs=159.9

Q ss_pred             eecccCceEEEEEEcc-CCcEEEEec-CCeEEEEeccccCc----CCCcccccccccceeEEEEecCCCeEEeeeCCccc
Q psy14511         31 AITREGDVVCGLKWSP-NGRYLASGS-NNTVKIWDFRQLDA----KRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICD  104 (488)
Q Consensus        31 ~~~~h~~~V~~l~~sp-~g~~las~~-d~~i~vwd~~~~~~----~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d  104 (488)
                      ...||+++|..++|+| +...||+|+ |.+|.||++..+..    ..++..+.+|...|--++|+|....++.+++.  |
T Consensus        76 ~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~--D  153 (472)
T KOG0303|consen   76 LVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGS--D  153 (472)
T ss_pred             CccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccC--C
Confidence            4579999999999999 677899999 99999999975432    23556788999999999999987766655553  9


Q ss_pred             ceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccC
Q psy14511        105 QTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKA  184 (488)
Q Consensus       105 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (488)
                      .+|.+||+.+|+.+..                                                                
T Consensus       154 n~v~iWnv~tgeali~----------------------------------------------------------------  169 (472)
T KOG0303|consen  154 NTVSIWNVGTGEALIT----------------------------------------------------------------  169 (472)
T ss_pred             ceEEEEeccCCceeee----------------------------------------------------------------
Confidence            9999999988874321                                                                


Q ss_pred             CCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCC
Q psy14511        185 KPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTE  264 (488)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~  264 (488)
                                                                         +.  |...|.++.|+.+|.+++++ +.|.
T Consensus       170 ---------------------------------------------------l~--hpd~i~S~sfn~dGs~l~Tt-ckDK  195 (472)
T KOG0303|consen  170 ---------------------------------------------------LD--HPDMVYSMSFNRDGSLLCTT-CKDK  195 (472)
T ss_pred             ---------------------------------------------------cC--CCCeEEEEEeccCCceeeee-cccc
Confidence                                                               11  77789999999999999999 9999


Q ss_pred             cEEEEECCcceeeeeecccccc--EEEEEe-cCCEEEEee---cCCeEEEEECcCCCccceee-ecCCccEEEEEEccCC
Q psy14511        265 YIDLWHEQEERLIQKLRTHMHQ--VIAMCW-NGNLLSCGT---IGGNILHYDVRTHSDYPTAI-TREGDVVCGLKWSPNG  337 (488)
Q Consensus       265 ~i~i~d~~~~~~~~~~~~~~~~--v~~~~~-~~~~l~~~~---~dg~i~i~d~~~~~~~~~~~-~~~~~~i~~~~~s~~~  337 (488)
                      .|++||.++++.+..-.+|.+.  ...+-. ++..+-+|-   .+.++-+||..+-..+.... ....+.|.---|.||.
T Consensus       196 kvRv~dpr~~~~v~e~~~heG~k~~Raifl~~g~i~tTGfsr~seRq~aLwdp~nl~eP~~~~elDtSnGvl~PFyD~dt  275 (472)
T KOG0303|consen  196 KVRVIDPRRGTVVSEGVAHEGAKPARAIFLASGKIFTTGFSRMSERQIALWDPNNLEEPIALQELDTSNGVLLPFYDPDT  275 (472)
T ss_pred             eeEEEcCCCCcEeeecccccCCCcceeEEeccCceeeeccccccccceeccCcccccCcceeEEeccCCceEEeeecCCC
Confidence            9999999999999888777653  334433 677554443   46789999988765443222 1233456667789999


Q ss_pred             cEEEEEe--cCeEEEEECCCC
Q psy14511        338 RYLASGS--NNTVKIWDFRQL  356 (488)
Q Consensus       338 ~~l~~~~--d~~i~iwd~~~~  356 (488)
                      +.++.++  |+.|+.|.+.+.
T Consensus       276 ~ivYl~GKGD~~IRYyEit~d  296 (472)
T KOG0303|consen  276 SIVYLCGKGDSSIRYFEITNE  296 (472)
T ss_pred             CEEEEEecCCcceEEEEecCC
Confidence            9988887  699999999865

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.84  E-value=1.5e-17  Score=147.93  Aligned_cols=321  Identities=15%  Similarity=0.158  Sum_probs=200.1

Q ss_pred             CceEE-EeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccc
Q psy14511          5 GNLLS-CGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSA   82 (488)
Q Consensus         5 g~~la-~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~   82 (488)
                      +++++ +-..+|.|.|.|..+.+.+. .+......-..+.|+|||+++.+++ |+.|.++|+.+.+....+   .. ...
T Consensus         5 ~~l~~V~~~~~~~v~viD~~t~~~~~-~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i---~~-G~~   79 (369)
T PF02239_consen    5 GNLFYVVERGSGSVAVIDGATNKVVA-RIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATI---KV-GGN   79 (369)
T ss_dssp             GGEEEEEEGGGTEEEEEETTT-SEEE-EEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEE---E--SSE
T ss_pred             ccEEEEEecCCCEEEEEECCCCeEEE-EEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEE---ec-CCC
Confidence            44554 55578999999999988554 4444334444578999999999888 999999999985543333   22 345


Q ss_pred             eeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccc
Q psy14511         83 VKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQS  162 (488)
Q Consensus        83 v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (488)
                      ...+++++||++++++...  ++.+.++|.++.+.++.+..........                               
T Consensus        80 ~~~i~~s~DG~~~~v~n~~--~~~v~v~D~~tle~v~~I~~~~~~~~~~-------------------------------  126 (369)
T PF02239_consen   80 PRGIAVSPDGKYVYVANYE--PGTVSVIDAETLEPVKTIPTGGMPVDGP-------------------------------  126 (369)
T ss_dssp             EEEEEE--TTTEEEEEEEE--TTEEEEEETTT--EEEEEE--EE-TTTS-------------------------------
T ss_pred             cceEEEcCCCCEEEEEecC--CCceeEeccccccceeeccccccccccc-------------------------------
Confidence            6789999999999988864  8999999999999888776542211100                               


Q ss_pred             cccccceeeecccccccccccCCCceeecCCCccccceeeeeee--CCCcEEEEE-CCCeEEEEECCCCceEEEEecCCC
Q psy14511        163 KRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDW--GYHDTLAVA-LDTSVYTWNTKTNKTQLLVEYPTY  239 (488)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~d~~v~iw~~~~~~~~~~~~~~~~  239 (488)
                                                         ...+.++-.  ....+++.- ..+.|.+.|.............  
T Consensus       127 -----------------------------------~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~~~i~--  169 (369)
T PF02239_consen  127 -----------------------------------ESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLKVTTIK--  169 (369)
T ss_dssp             --------------------------------------EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEEEEEEE--
T ss_pred             -----------------------------------CCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccceeeec--
Confidence                                               000011111  112344444 4588888888776544333332  


Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeec----cccccEEEEE-----------ecCCEEEEeecCC
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLR----THMHQVIAMC-----------WNGNLLSCGTIGG  304 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~----~~~~~v~~~~-----------~~~~~l~~~~~dg  304 (488)
                      .........|+|++++++++...+..|-++|.++++.+..+.    .|..+...+-           -.+...++.-...
T Consensus       170 ~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~~~~~~ig~~  249 (369)
T PF02239_consen  170 VGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGFGPVWATSGLGYFAIPLIGTD  249 (369)
T ss_dssp             --TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTTEEEEEEEBSSSSEEEEEE--
T ss_pred             ccccccccccCcccceeeecccccceeEEEeeccceEEEEeeccccccccccccccCCCcceEEeeccccceecccccCC
Confidence            445677899999999988876778899999999987776553    2333333222           1233333333334


Q ss_pred             eEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEE---e-c-CeEEEEECCCCCCCcccc------eeeeeecCCC
Q psy14511        305 NILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASG---S-N-NTVKIWDFRQLDAKRPLG------LIVPKLKREG  373 (488)
Q Consensus       305 ~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~---~-d-~~i~iwd~~~~~~~~~~~------~~~~~~~~~~  373 (488)
                      .+.+||..+. +.++.+.....+ ..+..+|+++++.+.   + + +.|.++|.++.+....+.      .....|+++|
T Consensus       250 ~v~v~d~~~w-kvv~~I~~~G~g-lFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~~~~~~h~ef~~dG  327 (369)
T PF02239_consen  250 PVSVHDDYAW-KVVKTIPTQGGG-LFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPGPGKRVVHMEFNPDG  327 (369)
T ss_dssp             TTT-STTTBT-SEEEEEE-SSSS---EE--TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHHHT--EEEEEE-TTS
T ss_pred             ccccchhhcC-eEEEEEECCCCc-ceeecCCCCccEEeeccCCCCCceEEEEECcCcceeEEEeccCCCcEeccEECCCC
Confidence            5556777765 356666666666 678889999999998   3 5 999999999986554443      2233999999


Q ss_pred             CEEEEEccCCCCeEEEEeCCCcceeEEEe
Q psy14511        374 RELVTSHGKQDCSLKMWEYPRLHLIEELK  402 (488)
Q Consensus       374 ~~l~~~~g~~~~~i~i~d~~~~~~~~~~~  402 (488)
                      +++.++....++.|.+||..+.+++.++.
T Consensus       328 ~~v~vS~~~~~~~i~v~D~~Tl~~~~~i~  356 (369)
T PF02239_consen  328 KEVWVSVWDGNGAIVVYDAKTLKEKKRIP  356 (369)
T ss_dssp             SEEEEEEE--TTEEEEEETTTTEEEEEEE
T ss_pred             CEEEEEEecCCCEEEEEECCCcEEEEEEE
Confidence            99998766666799999999999988876

...

>KOG0303|consensus

Probab=99.83  E-value=3.2e-18  Score=142.18  Aligned_cols=270  Identities=16%  Similarity=0.298  Sum_probs=184.7

Q ss_pred             eEEEEEEcc-----CCcEEEEec----CCeEEEEecc-ccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceE
Q psy14511         38 VVCGLKWSP-----NGRYLASGS----NNTVKIWDFR-QLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTV  107 (488)
Q Consensus        38 ~V~~l~~sp-----~g~~las~~----d~~i~vwd~~-~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i  107 (488)
                      .|+...|..     +.+|||..-    .|...|.-+. +|+.....-...||+++|..++|+|-+...+++|++  |.+|
T Consensus        29 rVs~~tWDS~fcavNPkfiAvi~easgGgaf~ViPl~k~Gr~d~~~P~v~GHt~~vLDi~w~PfnD~vIASgSe--D~~v  106 (472)
T KOG0303|consen   29 RVSRVTWDSSFCAVNPKFVAVIIEASGGGAFLVIPLVKTGRMDASYPLVCGHTAPVLDIDWCPFNDCVIASGSE--DTKV  106 (472)
T ss_pred             eeeeeeccccccccCCceEEEEEecCCCcceeecccccccccCCCCCCccCccccccccccCccCCceeecCCC--CceE
Confidence            455555543     567777632    3444444443 344444444578999999999999998889999986  9999


Q ss_pred             EEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCc
Q psy14511        108 RLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPE  187 (488)
Q Consensus       108 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (488)
                      .||.+..+.....+.                                                                 
T Consensus       107 ~vW~IPe~~l~~~lt-----------------------------------------------------------------  121 (472)
T KOG0303|consen  107 MVWQIPENGLTRDLT-----------------------------------------------------------------  121 (472)
T ss_pred             EEEECCCcccccCcc-----------------------------------------------------------------
Confidence            999987654322111                                                                 


Q ss_pred             eeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEE
Q psy14511        188 RILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYID  267 (488)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~  267 (488)
                                                                 .....+.+ |...|.-++|+|....++.+++.|..|.
T Consensus       122 -------------------------------------------epvv~L~g-H~rrVg~V~wHPtA~NVLlsag~Dn~v~  157 (472)
T KOG0303|consen  122 -------------------------------------------EPVVELYG-HQRRVGLVQWHPTAPNVLLSAGSDNTVS  157 (472)
T ss_pred             -------------------------------------------cceEEEee-cceeEEEEeecccchhhHhhccCCceEE
Confidence                                                       11233344 8889999999998755554449999999


Q ss_pred             EEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCc-cEEEEEEccCCcEEEEEe
Q psy14511        268 LWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGD-VVCGLKWSPNGRYLASGS  344 (488)
Q Consensus       268 i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-~i~~~~~s~~~~~l~~~~  344 (488)
                      +|++.+++.+.++. |...|.+++|  ||.++++.+.|..|+|||.+++. .+..-..|.+ .-..+.|-.+|..+.+|-
T Consensus       158 iWnv~tgeali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~-~v~e~~~heG~k~~Raifl~~g~i~tTGf  235 (472)
T KOG0303|consen  158 IWNVGTGEALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGT-VVSEGVAHEGAKPARAIFLASGKIFTTGF  235 (472)
T ss_pred             EEeccCCceeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCc-EeeecccccCCCcceeEEeccCceeeecc
Confidence            99999999888887 9999999999  79999999999999999999875 4444455653 345567777888555542


Q ss_pred             cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcc---eeEEEeeccccEEEEEEcCCCCEEE
Q psy14511        345 NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLH---LIEELKIHQERILSAVLSPDQTCVA  421 (488)
Q Consensus       345 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~---~~~~~~~~~~~v~~~~~s~~~~~l~  421 (488)
                      .                                   ...+.++.+||..+.+   .+.++. .++.|.---|.||.+.+.
T Consensus       236 s-----------------------------------r~seRq~aLwdp~nl~eP~~~~elD-tSnGvl~PFyD~dt~ivY  279 (472)
T KOG0303|consen  236 S-----------------------------------RMSERQIALWDPNNLEEPIALQELD-TSNGVLLPFYDPDTSIVY  279 (472)
T ss_pred             c-----------------------------------cccccceeccCcccccCcceeEEec-cCCceEEeeecCCCCEEE
Confidence            1                                   1224444444443322   123333 234466677888888776


Q ss_pred             EEe-CCCcEEEEecCCCCcc----ccccccCCcceEEeec
Q psy14511        422 AAS-ADETISIWNCFPRDKK----RKARQVGSGSSLEFAI  456 (488)
Q Consensus       422 t~~-~dg~v~iw~~~~~~~~----~~~~~~~~v~~~~~s~  456 (488)
                      .++ .|+.|+.|.+.+..+-    .......+-..+.|.|
T Consensus       280 l~GKGD~~IRYyEit~d~P~~hyln~f~S~epQRG~g~mP  319 (472)
T KOG0303|consen  280 LCGKGDSSIRYFEITNEPPFVHYLNTFSSKEPQRGMGFMP  319 (472)
T ss_pred             EEecCCcceEEEEecCCCceeEEecccccCCccccccccc
Confidence            544 7999999999887743    2233444445566666

>KOG4497|consensus

Probab=99.83  E-value=2.1e-18  Score=139.96  Aligned_cols=373  Identities=14%  Similarity=0.176  Sum_probs=223.0

Q ss_pred             CccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec--CCeEEEEeccccCcCCCcccccc
Q psy14511          1 MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAKRPQVNNQC   78 (488)
Q Consensus         1 ~~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~--d~~i~vwd~~~~~~~~~~~~~~~   78 (488)
                      ++.+|+++|+.+.- .+.|-|.++-+ +.+.+. --+.|..+.|..|..++..+.  |+.|.+|++...+-...   ...
T Consensus        16 fSp~g~yiAs~~~y-rlviRd~~tlq-~~qlf~-cldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ck---Ide   89 (447)
T KOG4497|consen   16 FSPCGNYIASLSRY-RLVIRDSETLQ-LHQLFL-CLDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCK---IDE   89 (447)
T ss_pred             ECCCCCeeeeeeee-EEEEeccchhh-HHHHHH-HHHHhhheeeeccceeeeeeeeccceEEEEEeecceeEEE---ecc
Confidence            46699999998854 88899998876 333222 245688899999999888875  89999999986443222   344


Q ss_pred             cccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccce
Q psy14511         79 HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKV  158 (488)
Q Consensus        79 h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (488)
                      ...++.+++|+|||+.++.++.  .|-.|.+|.+.+.+.... .-........++.+++                   +.
T Consensus        90 g~agls~~~WSPdgrhiL~tse--F~lriTVWSL~t~~~~~~-~~pK~~~kg~~f~~dg-------------------~f  147 (447)
T KOG4497|consen   90 GQAGLSSISWSPDGRHILLTSE--FDLRITVWSLNTQKGYLL-PHPKTNVKGYAFHPDG-------------------QF  147 (447)
T ss_pred             CCCcceeeeECCCcceEeeeec--ceeEEEEEEeccceeEEe-cccccCceeEEECCCC-------------------ce
Confidence            5678999999999999988887  599999999987654321 1111112222222222                   22


Q ss_pred             eccccccccceeeeccc-ccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecC
Q psy14511        159 LNQSKRTVSPTQFLRTL-GKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYP  237 (488)
Q Consensus       159 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~  237 (488)
                      .+...+. -+..+.... .+.+..+.         .-.........+.|+++       +..+.+||..-.-.+..++  
T Consensus       148 ~ai~sRr-DCkdyv~i~~c~~W~ll~---------~f~~dT~DltgieWsPd-------g~~laVwd~~Leykv~aYe--  208 (447)
T KOG4497|consen  148 CAILSRR-DCKDYVQISSCKAWILLK---------EFKLDTIDLTGIEWSPD-------GNWLAVWDNVLEYKVYAYE--  208 (447)
T ss_pred             eeeeecc-cHHHHHHHHhhHHHHHHH---------hcCCCcccccCceECCC-------CcEEEEecchhhheeeeee--
Confidence            2221111 000000000 00000000         00111233445667664       4456677754433333332  


Q ss_pred             CCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccc--------------------cEEEEEecCCEE
Q psy14511        238 TYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMH--------------------QVIAMCWNGNLL  297 (488)
Q Consensus       238 ~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~--------------------~v~~~~~~~~~l  297 (488)
                        ..-.+..++|+|.++.+++| +.|+.+++.+--+.+....+- |-.                    ...+++|-+..+
T Consensus       209 --~~lG~k~v~wsP~~qflavG-syD~~lrvlnh~tWk~f~efl-hl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~  284 (447)
T KOG4497|consen  209 --RGLGLKFVEWSPCNQFLAVG-SYDQMLRVLNHFTWKPFGEFL-HLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDL  284 (447)
T ss_pred             --eccceeEEEeccccceEEee-ccchhhhhhceeeeeehhhhc-cchhccCchhhhhhhhhcchhhhcccccccCCCcc
Confidence              33568899999999999999 999999998765554443331 111                    112333311111


Q ss_pred             EEeecCCeEEEEECcCCC------ccceeeecCCccEEEEEEccCCcEEEEEec---CeEEEEECCCCCCCccccee---
Q psy14511        298 SCGTIGGNILHYDVRTHS------DYPTAITREGDVVCGLKWSPNGRYLASGSN---NTVKIWDFRQLDAKRPLGLI---  365 (488)
Q Consensus       298 ~~~~~dg~i~i~d~~~~~------~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d---~~i~iwd~~~~~~~~~~~~~---  365 (488)
                      -++-....-.+|......      ++..........+.-++|++|..++|+-.|   +.+.+||+++.+....+...   
T Consensus       285 ~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLiQk~pi  364 (447)
T KOG4497|consen  285 EAHIWEESETIYEQQMTPVKVHKLKPPTDFPNPKCGAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVLIQKHPI  364 (447)
T ss_pred             ccCccccchhhhhhhhcceeeecccCCCCCCCcccccceeeecCCceEEeeecCCCCceEEEEechhhhhhhhhhhccce
Confidence            111000011122221110      111222333445778999999999999986   88999999987654433222   


Q ss_pred             -eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCC
Q psy14511        366 -VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADE  427 (488)
Q Consensus       366 -~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg  427 (488)
                       ...|.|....|+.++|  ...+++|...-...+.. ....-.|..+.|.-+|..++-.+.|.
T Consensus       365 raf~WdP~~prL~vctg--~srLY~W~psg~~~V~v-P~~GF~i~~l~W~~~g~~i~l~~kDa  424 (447)
T KOG4497|consen  365 RAFEWDPGRPRLVVCTG--KSRLYFWAPSGPRVVGV-PKKGFNIQKLQWLQPGEFIVLCGKDA  424 (447)
T ss_pred             eEEEeCCCCceEEEEcC--CceEEEEcCCCceEEec-CCCCceeeeEEecCCCcEEEEEcCCc
Confidence             2288999988888644  45699998765444433 33345799999999999999999885

>KOG1517|consensus

Probab=99.82  E-value=3.4e-18  Score=159.14  Aligned_cols=301  Identities=18%  Similarity=0.267  Sum_probs=198.9

Q ss_pred             ceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEec--CCCeEEeeeCCcccceEEEEecC
Q psy14511         37 DVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCP--WEPTLLATGGGICDQTVRLWNSM  113 (488)
Q Consensus        37 ~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~~~l~~~~~~~~d~~i~vwd~~  113 (488)
                      .+-..+.|+|-...++++. ...|+|||.+.++.......-......|+.+.+-.  |...++++.+   ||.|+||+--
T Consensus      1065 ~~pk~~~~hpf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~---dGvIRIwk~y 1141 (1387)
T KOG1517|consen 1065 QPPKTLKFHPFEPQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASS---DGVIRIWKDY 1141 (1387)
T ss_pred             CCCceeeecCCCceeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeecccchhheeeecc---CceEEEeccc
Confidence            3556788999889999988 68999999987655433322222345788998854  3334455554   9999999743


Q ss_pred             CCe-eeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecC
Q psy14511        114 NGK-EKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEA  192 (488)
Q Consensus       114 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (488)
                      ... ...++...-.....+...                                                          
T Consensus      1142 ~~~~~~~eLVTaw~~Ls~~~~~---------------------------------------------------------- 1163 (1387)
T KOG1517|consen 1142 ADKWKKPELVTAWSSLSDQLPG---------------------------------------------------------- 1163 (1387)
T ss_pred             ccccCCceeEEeeccccccCcc----------------------------------------------------------
Confidence            221 111111000000000000                                                          


Q ss_pred             CCccccceeeeeeeC--CCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcC-CCCeEEEEeCCCCcEEEE
Q psy14511        193 PSIINDFYTSGLDWG--YHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKP-RTTDLAVTNTCTEYIDLW  269 (488)
Q Consensus       193 ~~~~~~~~~~~~~~~--~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~~i~i~  269 (488)
                        .. +. -..++|.  .+.++++|.-..|++||........-+...  ....++++.-+- .|+.+++| ..||.|++|
T Consensus      1164 --~r-~~-~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~--s~t~vTaLS~~~~~gn~i~AG-faDGsvRvy 1236 (1387)
T KOG1517|consen 1164 --AR-GT-GLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPYG--SSTLVTALSADLVHGNIIAAG-FADGSVRVY 1236 (1387)
T ss_pred             --CC-CC-CeeeehhhhCCeEEecCCeeEEEEEecccceeEeecccC--CCccceeecccccCCceEEEe-ecCCceEEe
Confidence              00 00 0113443  477888888999999999988776655543  556677776543 35777777 999999999


Q ss_pred             ECCcc---eeeeeecccccc--EEEEEe--cC-CEEEEeecCCeEEEEECcCC-CccceeeecCC--c-cEEEEEEccCC
Q psy14511        270 HEQEE---RLIQKLRTHMHQ--VIAMCW--NG-NLLSCGTIGGNILHYDVRTH-SDYPTAITREG--D-VVCGLKWSPNG  337 (488)
Q Consensus       270 d~~~~---~~~~~~~~~~~~--v~~~~~--~~-~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~--~-~i~~~~~s~~~  337 (488)
                      |.+..   ..+...+.|...  |..+.+  .| ..|++|+.+|.|++||++.. ......+..|.  + ..+++..+++.
T Consensus      1237 D~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~ha 1316 (1387)
T KOG1517|consen 1237 DRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHA 1316 (1387)
T ss_pred             ecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeeccccCccceeeeeccCC
Confidence            98764   346667778877  888888  33 36999999999999999983 22222333332  3 48999999999


Q ss_pred             cEEEEEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCC
Q psy14511        338 RYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQ  417 (488)
Q Consensus       338 ~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~  417 (488)
                      ..+|+|+.+.|+||++....                          =+.++ ++   ...   +....+.+.+++|+|..
T Consensus      1317 piiAsGs~q~ikIy~~~G~~--------------------------l~~~k-~n---~~F---~~q~~gs~scL~FHP~~ 1363 (1387)
T KOG1517|consen 1317 PIIASGSAQLIKIYSLSGEQ--------------------------LNIIK-YN---PGF---MGQRIGSVSCLAFHPHR 1363 (1387)
T ss_pred             CeeeecCcceEEEEecChhh--------------------------hcccc-cC---ccc---ccCcCCCcceeeecchh
Confidence            99999998999999987321                          11121 11   111   11123457999999999


Q ss_pred             CEEEEEeCCCcEEEEecCCCC
Q psy14511        418 TCVAAASADETISIWNCFPRD  438 (488)
Q Consensus       418 ~~l~t~~~dg~v~iw~~~~~~  438 (488)
                      -++|+|+.|..|.||....++
T Consensus      1364 ~llAaG~~Ds~V~iYs~~k~~ 1384 (1387)
T KOG1517|consen 1364 LLLAAGSADSTVSIYSCEKPR 1384 (1387)
T ss_pred             HhhhhccCCceEEEeecCCcC
Confidence            999999999999999987654

>KOG1009|consensus

Probab=99.82  E-value=7e-18  Score=140.68  Aligned_cols=308  Identities=15%  Similarity=0.239  Sum_probs=197.1

Q ss_pred             CceEEEEEEccCCc-EEEEec-CCeEEEEeccccCcCC------CcccccccccceeEEEEecCCCeEEeeeCCcccceE
Q psy14511         36 GDVVCGLKWSPNGR-YLASGS-NNTVKIWDFRQLDAKR------PQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTV  107 (488)
Q Consensus        36 ~~~V~~l~~sp~g~-~las~~-d~~i~vwd~~~~~~~~------~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i  107 (488)
                      ..+|..+.|.++.. .||+|+ |..|++|.++..+...      .+..+..|...|+++.|+|+|+.|++++.   +|.+
T Consensus        13 ~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D---~g~v   89 (434)
T KOG1009|consen   13 HEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGD---GGEV   89 (434)
T ss_pred             CCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCC---CceE
Confidence            45799999999776 999998 9999999997654333      34457789999999999999976555554   9999


Q ss_pred             EEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCc
Q psy14511        108 RLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPE  187 (488)
Q Consensus       108 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (488)
                      .+|-...-. +  ....                                                               
T Consensus        90 ~lWk~~~~~-~--~~~d---------------------------------------------------------------  103 (434)
T KOG1009|consen   90 FLWKQGDVR-I--FDAD---------------------------------------------------------------  103 (434)
T ss_pred             EEEEecCcC-C--cccc---------------------------------------------------------------
Confidence            999864311 0  0000                                                               


Q ss_pred             eeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEE
Q psy14511        188 RILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYID  267 (488)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~  267 (488)
                                                    ..   -+...........+.+ |...|..++|+|++..++++ +.|..++
T Consensus       104 ------------------------------~e---~~~~ke~w~v~k~lr~-h~~diydL~Ws~d~~~l~s~-s~dns~~  148 (434)
T KOG1009|consen  104 ------------------------------TE---ADLNKEKWVVKKVLRG-HRDDIYDLAWSPDSNFLVSG-SVDNSVR  148 (434)
T ss_pred             ------------------------------ch---hhhCccceEEEEEecc-cccchhhhhccCCCceeeee-eccceEE
Confidence                                          00   0000111122223333 88899999999999999999 9999999


Q ss_pred             EEECCcceeeeeeccccccEEEEEec--CCEEEEeecCCeEEEEECcCCCccceeeecCCc-cEEEEEEccCCcEEEEEe
Q psy14511        268 LWHEQEERLIQKLRTHMHQVIAMCWN--GNLLSCGTIGGNILHYDVRTHSDYPTAITREGD-VVCGLKWSPNGRYLASGS  344 (488)
Q Consensus       268 i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-~i~~~~~s~~~~~l~~~~  344 (488)
                      +||+..++....+..|...+..++||  ++++++-+.|...+.+.+...+.    ...+.. .+..-++.+..       
T Consensus       149 l~Dv~~G~l~~~~~dh~~yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~~~----~~~~~~~~m~~~~~~~~e-------  217 (434)
T KOG1009|consen  149 LWDVHAGQLLAILDDHEHYVQGVAWDPLNQYVASKSSDRHPEGFSAKLKQV----IKRHGLDIMPAKAFNERE-------  217 (434)
T ss_pred             EEEeccceeEeeccccccccceeecchhhhhhhhhccCcccceeeeeeeee----eeeeeeeEeeecccCCCC-------
Confidence            99999999999999999999999995  78999989888777776654221    111110 00000111000       


Q ss_pred             cCeEEEEECCCCCCCcccceee--eeecCCCCEEEEEccCC-------CCeEEEEeCCC-cceeEEEeeccccEEEEEEc
Q psy14511        345 NNTVKIWDFRQLDAKRPLGLIV--PKLKREGRELVTSHGKQ-------DCSLKMWEYPR-LHLIEELKIHQERILSAVLS  414 (488)
Q Consensus       345 d~~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~l~~~~g~~-------~~~i~i~d~~~-~~~~~~~~~~~~~v~~~~~s  414 (488)
                      ....++|.-++      +..+.  .+|+|+|.++++..|.-       -+..++|+-.. .++...+.....+...+.|+
T Consensus       218 ~~s~rLfhDeT------lksFFrRlsfTPdG~llvtPag~~~~g~~~~~n~tYvfsrk~l~rP~~~lp~~~k~~lavr~~  291 (434)
T KOG1009|consen  218 GKSTRLFHDET------LKSFFRRLSFTPDGSLLVTPAGLFKVGGGVFRNTSYVFSRKDLKRPAARLPSPKKPALAVRFS  291 (434)
T ss_pred             cceeeeeecCc------hhhhhhhcccCCCCcEEEcccceeeeCCceeeceeEeeccccccCceeecCCCCcceEEEEee
Confidence            02223332222      11221  16667776666532211       12234444332 23445555555555666655


Q ss_pred             C------------------CCCEEEEEeCCCcEEEEecCCCCccc--cccccCCcceEEeecCCCceEEEE
Q psy14511        415 P------------------DQTCVAAASADETISIWNCFPRDKKR--KARQVGSGSSLEFAILKQPVSLTA  465 (488)
Q Consensus       415 ~------------------~~~~l~t~~~dg~v~iw~~~~~~~~~--~~~~~~~v~~~~~s~~~~~~~~~~  465 (488)
                      |                  -+..+|.++.+ .|++||.++.++..  -.-|-..++.++|++||..+.++.
T Consensus       292 pVy~elrp~~~~~~~~~lpyrlvfaiAt~~-svyvydtq~~~P~~~v~nihy~~iTDiaws~dg~~l~vSS  361 (434)
T KOG1009|consen  292 PVYYELRPLSSEKFLFVLPYRLVFAIATKN-SVYVYDTQTLEPLAVVDNIHYSAITDIAWSDDGSVLLVSS  361 (434)
T ss_pred             eeEEEeccccccccccccccceEEEEeecc-eEEEeccccccceEEEeeeeeeeecceeecCCCcEEEEec
Confidence            4                  23345666654 79999999988773  345778999999999998886543

>KOG0290|consensus

Probab=99.82  E-value=1e-17  Score=133.64  Aligned_cols=272  Identities=17%  Similarity=0.290  Sum_probs=189.0

Q ss_pred             CceEEEee----cCCeEEEEEcc--cCcccceeecccCceEEEEEEccCCc-----EEEEecCCeEEEEeccccCcCC-C
Q psy14511          5 GNLLSCGT----IGGNILHYDVR--THSDYPTAITREGDVVCGLKWSPNGR-----YLASGSNNTVKIWDFRQLDAKR-P   72 (488)
Q Consensus         5 g~~la~g~----~dg~i~iwd~~--~~~~~~~~~~~h~~~V~~l~~sp~g~-----~las~~d~~i~vwd~~~~~~~~-~   72 (488)
                      ..+||.|+    +.+.|.|-.+.  +++.+...-..|.-+++.+.|.|+..     +||+.+ ..+++|.+...+... +
T Consensus        59 ~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~~pdlLATs~-D~LRlWri~~ee~~~~~  137 (364)
T KOG0290|consen   59 KFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDANFDHPYPVTKLMWIPDSKGVYPDLLATSS-DFLRLWRIGDEESRVEL  137 (364)
T ss_pred             ceeEEEeeeccccCCeeEEEEEccCCCceeccCCCCCCCCccceEecCCccccCcchhhccc-CeEEEEeccCcCCceeh
Confidence            56788887    56677777655  33333222347889999999999863     566554 579999987422111 1


Q ss_pred             cc-----cccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCee---eeeeecCCCccccccccccccccceeE
Q psy14511         73 QV-----NNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKE---KCHVKTDSQQANDETISYREQKKRRHL  144 (488)
Q Consensus        73 ~~-----~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (488)
                      ..     .-..+.+++++..|+.-...++.+++-  |-+..|||++++..   ...+..|...+..+.|.-.        
T Consensus       138 ~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSi--DTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~--------  207 (364)
T KOG0290|consen  138 QSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSI--DTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKG--------  207 (364)
T ss_pred             hhhhccCcccccCCcccccccccCCcceeEeecc--cCeEEEEEEeeccccceeeEEEecCcceeEEEeccC--------
Confidence            11     123467899999999877777777763  99999999998732   3334444333333222110        


Q ss_pred             EEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEE
Q psy14511        145 SFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWN  224 (488)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~  224 (488)
                                                                                    +.+.+++++.||.||+||
T Consensus       208 --------------------------------------------------------------s~~~FASvgaDGSvRmFD  225 (364)
T KOG0290|consen  208 --------------------------------------------------------------SRDVFASVGADGSVRMFD  225 (364)
T ss_pred             --------------------------------------------------------------ccceEEEecCCCcEEEEE
Confidence                                                                          124577888999999999


Q ss_pred             CCCCceEEEE-ecCCCCCCceEEEEEcCCC-CeEEEEeCCCCcEEEEECCcc-eeeeeeccccccEEEEEe---cCCEEE
Q psy14511        225 TKTNKTQLLV-EYPTYDNAYISCVAWKPRT-TDLAVTNTCTEYIDLWHEQEE-RLIQKLRTHMHQVIAMCW---NGNLLS  298 (488)
Q Consensus       225 ~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~-~~l~~~~~~~~~i~i~d~~~~-~~~~~~~~~~~~v~~~~~---~~~~l~  298 (488)
                      ++.-+...++ +.+. ...+...++|+++. +++++-.-....|.+.|++.. .++..+++|.+.|.+++|   ....|.
T Consensus       226 LR~leHSTIIYE~p~-~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hic  304 (364)
T KOG0290|consen  226 LRSLEHSTIIYEDPS-PSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHIC  304 (364)
T ss_pred             ecccccceEEecCCC-CCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceee
Confidence            9987644333 3332 46778889998866 556665355668999999864 678899999999999999   578999


Q ss_pred             EeecCCeEEEEECcCCCc-----cceeeecCCccEEEEEEcc-CCcEEEEEecCeEEEE
Q psy14511        299 CGTIGGNILHYDVRTHSD-----YPTAITREGDVVCGLKWSP-NGRYLASGSNNTVKIW  351 (488)
Q Consensus       299 ~~~~dg~i~i~d~~~~~~-----~~~~~~~~~~~i~~~~~s~-~~~~l~~~~d~~i~iw  351 (488)
                      +++.|....+||+.....     +..... -...|+.+.|+| ...+++.+.++++.+.
T Consensus       305 taGDD~qaliWDl~q~~~~~~~dPilay~-a~~EVNqi~Ws~~~~Dwiai~~~kkleiL  362 (364)
T KOG0290|consen  305 TAGDDCQALIWDLQQMPRENGEDPILAYT-AGGEVNQIQWSSSQPDWIAICFGKKLEIL  362 (364)
T ss_pred             ecCCcceEEEEecccccccCCCCchhhhh-ccceeeeeeecccCCCEEEEEecCeeeEE
Confidence            999999999999976432     111122 445699999996 5679998887766654

>KOG2110|consensus

Probab=99.81  E-value=1.9e-16  Score=130.78  Aligned_cols=315  Identities=14%  Similarity=0.173  Sum_probs=202.0

Q ss_pred             ceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCe
Q psy14511         37 DVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGK  116 (488)
Q Consensus        37 ~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~  116 (488)
                      ..+..+.|+.+...|..|+..--+++..+....   ..........|..+-|+..  .++.++.. .-+.+++.++..+.
T Consensus         6 ~ti~~~~~Nqd~~~lsvGs~~Gyk~~~~~~~~k---~~~~~~~~~~IvEmLFSSS--LvaiV~~~-qpr~Lkv~~~Kk~~   79 (391)
T KOG2110|consen    6 PTINFIGFNQDSTLLSVGSKDGYKIFSCSPFEK---CFSKDTEGVSIVEMLFSSS--LVAIVSIK-QPRKLKVVHFKKKT   79 (391)
T ss_pred             cceeeeeeccceeEEEccCCCceeEEecCchHH---hhcccCCCeEEEEeecccc--eeEEEecC-CCceEEEEEcccCc
Confidence            356777899999999999944457887765322   1111112234666667643  44444442 23568899888777


Q ss_pred             eeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCcc
Q psy14511        117 EKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSII  196 (488)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (488)
                      .++.+.....                                                                      
T Consensus        80 ~ICe~~fpt~----------------------------------------------------------------------   89 (391)
T KOG2110|consen   80 TICEIFFPTS----------------------------------------------------------------------   89 (391)
T ss_pred             eEEEEecCCc----------------------------------------------------------------------
Confidence            6666544311                                                                      


Q ss_pred             ccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEe-CCCCcEEEEECCcce
Q psy14511        197 NDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTN-TCTEYIDLWHEQEER  275 (488)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~~~~~i~i~d~~~~~  275 (488)
                          +.++....++++++-. ..|++||+.+.+....+....++...+.++.+++.+.+++.-+ ...|.|.+||..+-+
T Consensus        90 ----IL~VrmNr~RLvV~Le-e~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~  164 (391)
T KOG2110|consen   90 ----ILAVRMNRKRLVVCLE-ESIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQ  164 (391)
T ss_pred             ----eEEEEEccceEEEEEc-ccEEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEEEcccce
Confidence                1112233345555544 4499999999998887765433666677788888888998853 357899999999999


Q ss_pred             eeeeeccccccEEEEEe--cCCEEEEeecCCe-EEEEECcCCCccceeeecC-CccEEEEEEccCCcEEEEEec-CeEEE
Q psy14511        276 LIQKLRTHMHQVIAMCW--NGNLLSCGTIGGN-ILHYDVRTHSDYPTAITRE-GDVVCGLKWSPNGRYLASGSN-NTVKI  350 (488)
Q Consensus       276 ~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~-i~i~d~~~~~~~~~~~~~~-~~~i~~~~~s~~~~~l~~~~d-~~i~i  350 (488)
                      .+..+..|.+++.+++|  +|.+||++++.|+ ||++.+.+++.....-++- ...|.+++|+|++++|++.++ ++|++
T Consensus       165 ~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHi  244 (391)
T KOG2110|consen  165 PVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETVHI  244 (391)
T ss_pred             eeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEecCCCeEEE
Confidence            99999999999999999  7999999999987 6899998875433332222 345899999999999999997 99999


Q ss_pred             EECCCCCCCcccce--eeeeecCCCCEEEEEccCCC-CeEEEEeCCCcceeEEEeeccc---cEEEEEEcCCCCEEEEEe
Q psy14511        351 WDFRQLDAKRPLGL--IVPKLKREGRELVTSHGKQD-CSLKMWEYPRLHLIEELKIHQE---RILSAVLSPDQTCVAAAS  424 (488)
Q Consensus       351 wd~~~~~~~~~~~~--~~~~~~~~~~~l~~~~g~~~-~~i~i~d~~~~~~~~~~~~~~~---~v~~~~~s~~~~~l~t~~  424 (488)
                      |.++.......-..  ....+.+-.+.+.   +... +.-.+||...  ...+.+...+   .+..+.=.+...++..++
T Consensus       245 FKL~~~~~~~~~~p~~~~~~~~~~sk~~~---sylps~V~~~~~~~R--~FAt~~l~~s~~~~~~~l~~~~~~~~v~vas  319 (391)
T KOG2110|consen  245 FKLEKVSNNPPESPTAGTSWFGKVSKAAT---SYLPSQVSSVLDQSR--KFATAKLPESGRKNICSLSSIQKIPRVLVAS  319 (391)
T ss_pred             EEecccccCCCCCCCCCCcccchhhhhhh---hhcchhhhhhhhhcc--ceeEEEccCCCccceEEeeccCCCCEEEEEE
Confidence            99987642221100  0001111111100   1000 1112233322  2222222222   233333335788999999


Q ss_pred             CCCcEEEEecCCC
Q psy14511        425 ADETISIWNCFPR  437 (488)
Q Consensus       425 ~dg~v~iw~~~~~  437 (488)
                      .||.++.|.+...
T Consensus       320 ~dG~~y~y~l~~~  332 (391)
T KOG2110|consen  320 YDGHLYSYRLPPK  332 (391)
T ss_pred             cCCeEEEEEcCCC
Confidence            9999999999864

>KOG1007|consensus

Probab=99.81  E-value=8.5e-18  Score=133.91  Aligned_cols=232  Identities=19%  Similarity=0.295  Sum_probs=169.1

Q ss_pred             CCceEEEeecC-------CeEEEEEcccCccc--------ceee-cccCceEEEEEEccCCcEEEEecCCeEEEEecccc
Q psy14511          4 NGNLLSCGTIG-------GNILHYDVRTHSDY--------PTAI-TREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQL   67 (488)
Q Consensus         4 dg~~la~g~~d-------g~i~iwd~~~~~~~--------~~~~-~~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~   67 (488)
                      |.++|++...+       -.+.||.+......        ...+ ..+-+.|.|+.|.|++..||+-.|..|.+|++...
T Consensus        75 d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~Ldteavg~i~cvew~Pns~klasm~dn~i~l~~l~es  154 (370)
T KOG1007|consen   75 DQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVASLDTEAVGKINCVEWEPNSDKLASMDDNNIVLWSLDES  154 (370)
T ss_pred             CCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhcCCHHHhCceeeEEEcCCCCeeEEeccCceEEEEcccC
Confidence            67788877542       24779998754321        1112 24556899999999999999999999999999865


Q ss_pred             CcC-CCcc--cccccccceeEEEEec--CCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccce
Q psy14511         68 DAK-RPQV--NNQCHLSAVKAIAWCP--WEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRR  142 (488)
Q Consensus        68 ~~~-~~~~--~~~~h~~~v~~l~~~~--~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (488)
                      ... ..+.  .-..|....++-+|+|  |+..+++++    |+++..||+++.++...+.                    
T Consensus       155 s~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt~----d~tl~~~D~RT~~~~~sI~--------------------  210 (370)
T KOG1007|consen  155 SKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATTS----DSTLQFWDLRTMKKNNSIE--------------------  210 (370)
T ss_pred             cchheeecccccccccceecccccCCCCccceEEEeC----CCcEEEEEccchhhhcchh--------------------
Confidence            432 1111  1123566788888988  666555544    8899999988665322221                    


Q ss_pred             eEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEE
Q psy14511        143 HLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYT  222 (488)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i  222 (488)
                                                                                                      
T Consensus       211 --------------------------------------------------------------------------------  210 (370)
T KOG1007|consen  211 --------------------------------------------------------------------------------  210 (370)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCc-ceeeeeeccccccEEEEEec---CCEEE
Q psy14511        223 WNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE-ERLIQKLRTHMHQVIAMCWN---GNLLS  298 (488)
Q Consensus       223 w~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~---~~~l~  298 (488)
                                     .+|...+..+.|+|+.++++++++.||.|++||.+. ..++..+.+|..-|.++.|+   .++++
T Consensus       211 ---------------dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~~hdqLiL  275 (370)
T KOG1007|consen  211 ---------------DAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNPEHDQLIL  275 (370)
T ss_pred             ---------------hhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEEecCccceEEE
Confidence                           117778999999999988888779999999999986 45788999999999999994   68999


Q ss_pred             EeecCCeEEEEECcCCC----------------------------ccceeeecCCccEEEEEEccCCcEE-EEEe-cCeE
Q psy14511        299 CGTIGGNILHYDVRTHS----------------------------DYPTAITREGDVVCGLKWSPNGRYL-ASGS-NNTV  348 (488)
Q Consensus       299 ~~~~dg~i~i~d~~~~~----------------------------~~~~~~~~~~~~i~~~~~s~~~~~l-~~~~-d~~i  348 (488)
                      +++.|..|.+|....-.                            ..+..+..|.+.|++++||.-..++ |+-+ ||.+
T Consensus       276 s~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPWiFASLSYDGRv  355 (370)
T KOG1007|consen  276 SGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPWIFASLSYDGRV  355 (370)
T ss_pred             ecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCCCeeEEEeccCceE
Confidence            99999999999653211                            1233567789999999999866554 5555 6877


Q ss_pred             EEEECC
Q psy14511        349 KIWDFR  354 (488)
Q Consensus       349 ~iwd~~  354 (488)
                      .|=.+.
T Consensus       356 iIs~V~  361 (370)
T KOG1007|consen  356 IISSVP  361 (370)
T ss_pred             EeecCC
Confidence            776554

>KOG0642|consensus

Probab=99.81  E-value=3.5e-19  Score=154.60  Aligned_cols=261  Identities=13%  Similarity=0.196  Sum_probs=177.7

Q ss_pred             eecccCceEEEEEEccCCcEEEEec-CCeEEEEecc-----ccCcCCCcccccccccceeEEEEecCCCeEEeeeCCccc
Q psy14511         31 AITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFR-----QLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICD  104 (488)
Q Consensus        31 ~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~-----~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d  104 (488)
                      .+..|.+.|+.++|.|....|++++ |+.+++|++.     ......++.++.+|.++|.|++..++++.+++.|-   |
T Consensus       289 tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~---D  365 (577)
T KOG0642|consen  289 TLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGI---D  365 (577)
T ss_pred             eeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeecc---C
Confidence            5678999999999999999999999 9999999993     23345678889999999999999999999888887   9


Q ss_pred             ceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccC
Q psy14511        105 QTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKA  184 (488)
Q Consensus       105 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (488)
                      |+|+.|++....-...                                                                
T Consensus       366 g~I~~w~~p~n~dp~d----------------------------------------------------------------  381 (577)
T KOG0642|consen  366 GTIRCWNLPPNQDPDD----------------------------------------------------------------  381 (577)
T ss_pred             ceeeeeccCCCCCccc----------------------------------------------------------------
Confidence            9999999852210000                                                                


Q ss_pred             CCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCC
Q psy14511        185 KPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTE  264 (488)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~  264 (488)
                                                           .+|..    ...-.+.| |...+..+++++....|+.+ +.||
T Consensus       382 -------------------------------------s~dp~----vl~~~l~G-htdavw~l~~s~~~~~Llsc-s~Dg  418 (577)
T KOG0642|consen  382 -------------------------------------SYDPS----VLSGTLLG-HTDAVWLLALSSTKDRLLSC-SSDG  418 (577)
T ss_pred             -------------------------------------ccCcc----hhccceec-cccceeeeeecccccceeee-cCCc
Confidence                                                 00000    00112334 88999999999999889888 9999


Q ss_pred             cEEEEECCcceeeeeecc--ccccEEEEEecCCEEEEeecCCeEEEEECcCCCc--cceeeecC-------CccEEEEEE
Q psy14511        265 YIDLWHEQEERLIQKLRT--HMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSD--YPTAITRE-------GDVVCGLKW  333 (488)
Q Consensus       265 ~i~i~d~~~~~~~~~~~~--~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~-------~~~i~~~~~  333 (488)
                      ++++|+.....+ .++..  ..+.-..+++....++-...+.....+++.+...  ....+...       ...+..+.+
T Consensus       419 Tvr~w~~~~~~~-~~f~~~~e~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs  497 (577)
T KOG0642|consen  419 TVRLWEPTEESP-CTFGEPKEHGYPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVS  497 (577)
T ss_pred             eEEeeccCCcCc-cccCCccccCCcceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEe
Confidence            999999876555 33322  1222344555222222222223333333322111  11111100       011223333


Q ss_pred             ccCCcEEEEEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEE
Q psy14511        334 SPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVL  413 (488)
Q Consensus       334 s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~  413 (488)
                      +|.                                    +...++  +-.|+.|+++|..+++++.....|...++++++
T Consensus       498 ~~~------------------------------------~~~~~~--~hed~~Ir~~dn~~~~~l~s~~a~~~svtslai  539 (577)
T KOG0642|consen  498 HPT------------------------------------ADITFT--AHEDRSIRFFDNKTGKILHSMVAHKDSVTSLAI  539 (577)
T ss_pred             cCC------------------------------------CCeeEe--cccCCceecccccccccchheeeccceecceee
Confidence            333                                    333333  466788888888888999999999999999999


Q ss_pred             cCCCCEEEEEeCCCcEEEEecCCCCcc
Q psy14511        414 SPDQTCVAAASADETISIWNCFPRDKK  440 (488)
Q Consensus       414 s~~~~~l~t~~~dg~v~iw~~~~~~~~  440 (488)
                      .|+|.+|++++.|+.+++|.+......
T Consensus       540 ~~ng~~l~s~s~d~sv~l~kld~k~~~  566 (577)
T KOG0642|consen  540 DPNGPYLMSGSHDGSVRLWKLDVKTCV  566 (577)
T ss_pred             cCCCceEEeecCCceeehhhccchhee
Confidence            999999999999999999999765544

>KOG1188|consensus

Probab=99.80  E-value=3.6e-17  Score=133.50  Aligned_cols=266  Identities=16%  Similarity=0.257  Sum_probs=172.7

Q ss_pred             ceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEcc--CCcEEEEec-CCeEEEEeccccCcCCCcccccccc-c
Q psy14511          6 NLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSP--NGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHL-S   81 (488)
Q Consensus         6 ~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp--~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~-~   81 (488)
                      +.+|++.+.|.|++||..+++ ....+.+|...++.++|..  ....+.+++ ||+|++||+++......+ ...+|. .
T Consensus        41 ~~vav~lSngsv~lyd~~tg~-~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~-~~~~~~~~  118 (376)
T KOG1188|consen   41 TAVAVSLSNGSVRLYDKGTGQ-LLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARI-SWTQQSGT  118 (376)
T ss_pred             eeEEEEecCCeEEEEeccchh-hhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhhe-eccCCCCC
Confidence            568999999999999999977 4467889999999999987  456777777 999999999975544333 344454 4


Q ss_pred             ceeEEEEecCCCeEEeeeCC--cccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeecccccee
Q psy14511         82 AVKAIAWCPWEPTLLATGGG--ICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVL  159 (488)
Q Consensus        82 ~v~~l~~~~~~~~l~~~~~~--~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (488)
                      +..+++-...+ .++++|..  ..+-.+.+||++..+..                                         
T Consensus       119 ~f~~ld~nck~-~ii~~GtE~~~s~A~v~lwDvR~~qq~-----------------------------------------  156 (376)
T KOG1188|consen  119 PFICLDLNCKK-NIIACGTELTRSDASVVLWDVRSEQQL-----------------------------------------  156 (376)
T ss_pred             cceEeeccCcC-CeEEeccccccCceEEEEEEeccccch-----------------------------------------
Confidence            56666655444 45555531  01445666666544320                                         


Q ss_pred             ccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCC
Q psy14511        160 NQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTY  239 (488)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~  239 (488)
                                                                                             +..+ .+. 
T Consensus       157 -----------------------------------------------------------------------l~~~-~eS-  163 (376)
T KOG1188|consen  157 -----------------------------------------------------------------------LRQL-NES-  163 (376)
T ss_pred             -----------------------------------------------------------------------hhhh-hhh-
Confidence                                                                                   1111 111 


Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCccee---eeeeccccccEEEEEec--C-CEEEEeecCCeEEEEECcC
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERL---IQKLRTHMHQVIAMCWN--G-NLLSCGTIGGNILHYDVRT  313 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~---~~~~~~~~~~v~~~~~~--~-~~l~~~~~dg~i~i~d~~~  313 (488)
                      |...|+++.|+|....++.+|+.||.|.+||+.....   +...-.|...|..+.|-  + +.|.+-+..+...+|+++.
T Consensus       164 H~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~  243 (376)
T KOG1188|consen  164 HNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNEEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELED  243 (376)
T ss_pred             ccCcceeEEecCCCCCeEEeecccceEEeeecCCCcchhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccC
Confidence            8899999999998866666669999999999876422   22333577889999993  2 4688999999999999987


Q ss_pred             CCccceeeecCC------------ccEEEEEEcc-CCcEEEEEe-c-CeEEEEECCC---CCCCccccee-------ee-
Q psy14511        314 HSDYPTAITREG------------DVVCGLKWSP-NGRYLASGS-N-NTVKIWDFRQ---LDAKRPLGLI-------VP-  367 (488)
Q Consensus       314 ~~~~~~~~~~~~------------~~i~~~~~s~-~~~~l~~~~-d-~~i~iwd~~~---~~~~~~~~~~-------~~-  367 (488)
                      +.. ...+....            ..+-.. .+| ++..++.++ + +...++-+..   +...+....+       +. 
T Consensus       244 ~~~-~~~~~~~~~~~~d~r~~~~~dY~I~~-~~~~~~~~~~l~g~~~n~~~~~~~~~~~s~~~~~~~a~l~g~~~eiVR~  321 (376)
T KOG1188|consen  244 GSE-ETWLENPDVSADDLRKEDNCDYVINE-HSPGDKDTCALAGTDSNKGTIFPLVDTSSGSLLTEPAILQGGHEEIVRD  321 (376)
T ss_pred             CCh-hhcccCccchhhhHHhhhhhhheeec-ccCCCcceEEEeccccCceeEEEeeecccccccCccccccCCcHHHHHH
Confidence            652 22221110            111111 223 334444444 4 6666665542   3222222222       12 


Q ss_pred             -eecCCCCEEEEEccCCCCeEEEEeC
Q psy14511        368 -KLKREGRELVTSHGKQDCSLKMWEY  392 (488)
Q Consensus       368 -~~~~~~~~l~~~~g~~~~~i~i~d~  392 (488)
                       .|...+..+++  |++||.+.+|..
T Consensus       322 i~~~~~~~~l~T--GGEDG~l~~Wk~  345 (376)
T KOG1188|consen  322 ILFDVKNDVLYT--GGEDGLLQAWKV  345 (376)
T ss_pred             Hhhhcccceeec--cCCCceEEEEec
Confidence             55566777777  999999999986

>KOG0644|consensus

Probab=99.80  E-value=5e-19  Score=160.50  Aligned_cols=266  Identities=15%  Similarity=0.212  Sum_probs=192.6

Q ss_pred             cCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCccccccccc
Q psy14511          3 WNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLS   81 (488)
Q Consensus         3 ~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~   81 (488)
                      ..|.++++|+.|..++||..++..++ ....||.+.|+.++.+.+..++|+++ |..|++|.+.++   .++..+.+|++
T Consensus       200 rtg~~Iitgsdd~lvKiwS~et~~~l-As~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~---~pvsvLrghtg  275 (1113)
T KOG0644|consen  200 RTGRYIITGSDDRLVKIWSMETARCL-ASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDG---APVSVLRGHTG  275 (1113)
T ss_pred             cccceEeecCccceeeeeeccchhhh-ccCCCCccccchhccchhhhhhhhcccCceEEEEecCCC---chHHHHhcccc
Confidence            46899999999999999999998865 56899999999999999999999999 999999999874   46667899999


Q ss_pred             ceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecc
Q psy14511         82 AVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQ  161 (488)
Q Consensus        82 ~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (488)
                      .|++++|+|--    +++.   ||++++||.+- ...........        ++..                       
T Consensus       276 avtaiafsP~~----sss~---dgt~~~wd~r~-~~~~y~prp~~--------~~~~-----------------------  316 (1113)
T KOG0644|consen  276 AVTAIAFSPRA----SSSD---DGTCRIWDARL-EPRIYVPRPLK--------FTEK-----------------------  316 (1113)
T ss_pred             ceeeeccCccc----cCCC---CCceEeccccc-cccccCCCCCC--------cccc-----------------------
Confidence            99999999954    4444   99999999861 11000000000        0000                       


Q ss_pred             ccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCC
Q psy14511        162 SKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDN  241 (488)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~  241 (488)
                                                         ..+....++-....+++++.|+.-..|....-..         +.
T Consensus       317 -----------------------------------~~~~s~~~~~~~~~f~Tgs~d~ea~n~e~~~l~~---------~~  352 (1113)
T KOG0644|consen  317 -----------------------------------DLVDSILFENNGDRFLTGSRDGEARNHEFEQLAW---------RS  352 (1113)
T ss_pred             -----------------------------------cceeeeeccccccccccccCCcccccchhhHhhh---------hc
Confidence                                               0000001111234677777888777776543221         11


Q ss_pred             CceEEEEEcCCC-CeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe---cCCEEEEeecCCeEEEEECcCCCcc
Q psy14511        242 AYISCVAWKPRT-TDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW---NGNLLSCGTIGGNILHYDVRTHSDY  317 (488)
Q Consensus       242 ~~i~~~~~~~~~-~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~  317 (488)
                      ..+.-+..+.+- .+.+++ -.+..+.+|++.++...+.+.+|...+..+.+   +.+...+++.||...|||+-.+...
T Consensus       353 ~~lif~t~ssd~~~~~~~a-r~~~~~~vwnl~~g~l~H~l~ghsd~~yvLd~Hpfn~ri~msag~dgst~iwdi~eg~pi  431 (1113)
T KOG0644|consen  353 NLLIFVTRSSDLSSIVVTA-RNDHRLCVWNLYTGQLLHNLMGHSDEVYVLDVHPFNPRIAMSAGYDGSTIIWDIWEGIPI  431 (1113)
T ss_pred             cceEEEeccccccccceee-eeeeEeeeeecccchhhhhhcccccceeeeeecCCCcHhhhhccCCCceEeeecccCCcc
Confidence            122222222222 233444 67888999999999999999999999999988   6788889999999999999987655


Q ss_pred             ceeeecCCccEEEEEEccCCcEEEEEec-CeEEEEECCCCC
Q psy14511        318 PTAITREGDVVCGLKWSPNGRYLASGSN-NTVKIWDFRQLD  357 (488)
Q Consensus       318 ~~~~~~~~~~i~~~~~s~~~~~l~~~~d-~~i~iwd~~~~~  357 (488)
                      .....+|.. +..-+||+||..++...+ |.+.|.....++
T Consensus       432 k~y~~gh~k-l~d~kFSqdgts~~lsd~hgql~i~g~gqs~  471 (1113)
T KOG0644|consen  432 KHYFIGHGK-LVDGKFSQDGTSIALSDDHGQLYILGTGQSK  471 (1113)
T ss_pred             eeeecccce-eeccccCCCCceEecCCCCCceEEeccCCCc
Confidence            555566544 667899999999998887 999999876553

>KOG1334|consensus

Probab=99.79  E-value=2.4e-18  Score=146.74  Aligned_cols=291  Identities=16%  Similarity=0.226  Sum_probs=210.6

Q ss_pred             ceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecC--CCeEEeeeCCcccc
Q psy14511         29 PTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPW--EPTLLATGGGICDQ  105 (488)
Q Consensus        29 ~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~l~~~~~~~~d~  105 (488)
                      ...|.+|.+.|..|.|+..|..|++|+ |..|.+||+..+...  +.-..+|...|..-.|.|.  .+.++.++.   ||
T Consensus       135 ~~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~--l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~---dg  209 (559)
T KOG1334|consen  135 QKKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPK--LSFESGHCNNVFQAKFIPFSGDRTIVTSSR---DG  209 (559)
T ss_pred             hhcccCCCCccceeeecccCceeeccCccceEEeehhhccCcc--cccccccccchhhhhccCCCCCcCceeccc---cC
Confidence            345789999999999999999999999 899999999875432  2335689999998889774  345555555   88


Q ss_pred             eEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCC
Q psy14511        106 TVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAK  185 (488)
Q Consensus       106 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (488)
                      .+++=.+.....                                                                    
T Consensus       210 qvr~s~i~~t~~--------------------------------------------------------------------  221 (559)
T KOG1334|consen  210 QVRVSEILETGY--------------------------------------------------------------------  221 (559)
T ss_pred             ceeeeeeccccc--------------------------------------------------------------------
Confidence            887765532211                                                                    


Q ss_pred             CceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCc
Q psy14511        186 PERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEY  265 (488)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~  265 (488)
                                                                  +.....+.. |.++|.-++.-|+..+-+.+++.|+.
T Consensus       222 --------------------------------------------~e~t~rl~~-h~g~vhklav~p~sp~~f~S~geD~~  256 (559)
T KOG1334|consen  222 --------------------------------------------VENTKRLAP-HEGPVHKLAVEPDSPKPFLSCGEDAV  256 (559)
T ss_pred             --------------------------------------------eecceeccc-ccCccceeeecCCCCCcccccccccc
Confidence                                                        111111111 88889999999988665555589999


Q ss_pred             EEEEECCcceeeeee---ccccc---cEEEEEe---cCCEEEEeecCCeEEEEECcCCCcc-----ceee------ecCC
Q psy14511        266 IDLWHEQEERLIQKL---RTHMH---QVIAMCW---NGNLLSCGTIGGNILHYDVRTHSDY-----PTAI------TREG  325 (488)
Q Consensus       266 i~i~d~~~~~~~~~~---~~~~~---~v~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~-----~~~~------~~~~  325 (488)
                      +.-+|++...+...+   ..+..   ...+++.   +...+++++.|..+++||.+.-...     +..+      ....
T Consensus       257 v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~  336 (559)
T KOG1334|consen  257 VFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDP  336 (559)
T ss_pred             eeeeeeccCCccceeeeeccCCccceeeeeEecCCCCccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCc
Confidence            999998876543333   22333   4456666   4568999999999999998753221     1111      1223


Q ss_pred             ccEEEEEEccCC-cEEEEEecCeEEEEECCCCCC--Ccc-----------ccee--------eeeecCCCCEEEEEccCC
Q psy14511        326 DVVCGLKWSPNG-RYLASGSNNTVKIWDFRQLDA--KRP-----------LGLI--------VPKLKREGRELVTSHGKQ  383 (488)
Q Consensus       326 ~~i~~~~~s~~~-~~l~~~~d~~i~iwd~~~~~~--~~~-----------~~~~--------~~~~~~~~~~l~~~~g~~  383 (488)
                      -.|++++|+.++ .+|++-.|-.|+++.-..+..  ..+           ++..        ++-|-|...++++  |++
T Consensus       337 v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvS--GSD  414 (559)
T KOG1334|consen  337 VNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVS--GSD  414 (559)
T ss_pred             ccceeEEecCCccceeeeecccceEEeccccccCCCCCCCcchhhccchhhcccccccccceeeeccCccceEEe--cCc
Confidence            458999999655 566666788899995433222  000           1111        3378899999999  999


Q ss_pred             CCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCc
Q psy14511        384 DCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDK  439 (488)
Q Consensus       384 ~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~  439 (488)
                      -|.|.||+-.+++.++-+.+....|+|+.-+|--..||+++-|..|+||-..+.+.
T Consensus       415 CGhIFiW~K~t~eii~~MegDr~VVNCLEpHP~~PvLAsSGid~DVKIWTP~~~er  470 (559)
T KOG1334|consen  415 CGHIFIWDKKTGEIIRFMEGDRHVVNCLEPHPHLPVLASSGIDHDVKIWTPLTAER  470 (559)
T ss_pred             cceEEEEecchhHHHHHhhcccceEeccCCCCCCchhhccCCccceeeecCCcccc
Confidence            99999999999999998888877999999999999999999999999998855443

>KOG4227|consensus

Probab=99.79  E-value=1.7e-17  Score=137.88  Aligned_cols=280  Identities=14%  Similarity=0.161  Sum_probs=190.0

Q ss_pred             CccCCceEEEeecCCeEEEEEccc------CcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCc
Q psy14511          1 MCWNGNLLSCGTIGGNILHYDVRT------HSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQ   73 (488)
Q Consensus         1 ~~~dg~~la~g~~dg~i~iwd~~~------~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~   73 (488)
                      |+.||++||+|+.|-.++||++..      .+++...-..|...|.|++|....++|.+|. +++|...|+++.+... +
T Consensus        64 FS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HDiEt~qsi~-V  142 (609)
T KOG4227|consen   64 FSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKHDIETKQSIY-V  142 (609)
T ss_pred             eccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcceeEeeecccceeee-e
Confidence            456899999999999999999864      2333323345778999999999999999999 9999999999844322 1


Q ss_pred             ccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeec
Q psy14511         74 VNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEI  153 (488)
Q Consensus        74 ~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (488)
                      ..-....+.|..+.-+|....++++..   ++.|.+||.+.......+...                             
T Consensus       143 ~~~~~~~~~VY~m~~~P~DN~~~~~t~---~~~V~~~D~Rd~~~~~~~~~~-----------------------------  190 (609)
T KOG4227|consen  143 ANENNNRGDVYHMDQHPTDNTLIVVTR---AKLVSFIDNRDRQNPISLVLP-----------------------------  190 (609)
T ss_pred             ecccCcccceeecccCCCCceEEEEec---CceEEEEeccCCCCCCceeee-----------------------------
Confidence            111223358999999999877777666   999999998765411110000                             


Q ss_pred             cccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC-CCcEEEEECCCeEEEEECCCCceEE
Q psy14511        154 DRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG-YHDTLAVALDTSVYTWNTKTNKTQL  232 (488)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~v~iw~~~~~~~~~  232 (488)
                                                             ......|+...+... +..+++....+-+-+||.+......
T Consensus       191 ---------------------------------------AN~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~~~~~~  231 (609)
T KOG4227|consen  191 ---------------------------------------ANSGKNFYTAEFHPETPALILVNSETGGPNVFDRRMQARPV  231 (609)
T ss_pred             ---------------------------------------cCCCccceeeeecCCCceeEEeccccCCCCceeeccccchH
Confidence                                                   000011111112221 2345566688889999987654211


Q ss_pred             E-----EecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecccc-------ccEEEEEe-cCCEEEE
Q psy14511        233 L-----VEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHM-------HQVIAMCW-NGNLLSC  299 (488)
Q Consensus       233 ~-----~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~-------~~v~~~~~-~~~~l~~  299 (488)
                      .     ..++. ....-..+.|+|.|+.+++- -....-.+||+-..++...-..|.       ..+.+++| +...+++
T Consensus       232 ~~~~~~~~L~~-~~~~~M~~~~~~~G~Q~msi-RR~~~P~~~D~~S~R~~V~k~D~N~~GY~N~~T~KS~~F~~D~~v~t  309 (609)
T KOG4227|consen  232 YQRSMFKGLPQ-ENTEWMGSLWSPSGNQFMSI-RRGKCPLYFDFISQRCFVLKSDHNPNGYCNIKTIKSMTFIDDYTVAT  309 (609)
T ss_pred             HhhhccccCcc-cchhhhheeeCCCCCeehhh-hccCCCEEeeeecccceeEeccCCCCcceeeeeeeeeeeecceeeec
Confidence            1     11111 12234678899999999887 666677788887754432222222       34567777 6677999


Q ss_pred             eecCCeEEEEECcCCC----------------------ccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECC
Q psy14511        300 GTIGGNILHYDVRTHS----------------------DYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFR  354 (488)
Q Consensus       300 ~~~dg~i~i~d~~~~~----------------------~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~  354 (488)
                      |+.+=.|++|.+....                      .....+.+|.+-++.+.|+|...+|++.+ .+.++||.-.
T Consensus       310 GSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~~~~VLrGHRSv~NQVRF~~H~~~l~SSGVE~~~KlWS~~  387 (609)
T KOG4227|consen  310 GSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEKELTVLRGHRSVPNQVRFSQHNNLLVSSGVENSFKLWSDH  387 (609)
T ss_pred             cCcccceEEEecCCCccccCccccCcchhhCchhheecceeEEEecccccccceeecCCcceEeccchhhheeccccc
Confidence            9999999999875321                      12456789999999999999998888888 5999999764

>KOG2315|consensus

Probab=99.79  E-value=1.5e-15  Score=132.42  Aligned_cols=354  Identities=18%  Similarity=0.252  Sum_probs=221.2

Q ss_pred             CeEEEEEcccCcccceeeccc--CceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCcccccccccceeEEEEecCC
Q psy14511         15 GNILHYDVRTHSDYPTAITRE--GDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWE   92 (488)
Q Consensus        15 g~i~iwd~~~~~~~~~~~~~h--~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~   92 (488)
                      -.+.+|...........+...  ..++...++|++|+++|.+.+..++|++..+..   .+...  ....+.++.|+|-+
T Consensus        11 e~~~l~~~~~~~~~~~~f~~~~~~~~~~v~~~S~~G~lfA~~~~~~v~i~~~~~~~---~~lt~--~~~~~~~L~fSP~g   85 (566)
T KOG2315|consen   11 EGFYLFNGPGSKDAVTVFEQNKTSRPCNVFAYSNNGRLFAYSDNQVVKVFEIATLK---VVLCV--ELKKTYDLLFSPKG   85 (566)
T ss_pred             ceeEEeccCCccccccccccCCCCCcceeEEEcCCCcEEEEEcCCeEEEEEccCCc---EEEEe--ccceeeeeeecccc
Confidence            348888876544333333321  345778899999999999999999999988754   22111  12378999999999


Q ss_pred             CeEEeeeC----C---cccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecccccc
Q psy14511         93 PTLLATGG----G---ICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRT  165 (488)
Q Consensus        93 ~~l~~~~~----~---~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (488)
                      .+|.+--.    .   .....+++|+++++.....+....+....                                   
T Consensus        86 ~yL~T~e~~~i~~~~~~~~pn~~v~~vet~~~~s~~q~k~Q~~W~-----------------------------------  130 (566)
T KOG2315|consen   86 NYLLTWEPWAIYGPKNASNPNVLVYNVETGVQRSQIQKKMQNGWV-----------------------------------  130 (566)
T ss_pred             cccccccccccccCCCCCCCceeeeeeccceehhheehhhhcCcc-----------------------------------
Confidence            88764211    0   00235678988886554444433222111                                   


Q ss_pred             ccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEE-EECCCeEEEEECCCCceEEEEecCCCCCCce
Q psy14511        166 VSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLA-VALDTSVYTWNTKTNKTQLLVEYPTYDNAYI  244 (488)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i  244 (488)
                                                            ..|+.+..++ --..+.+.+|++..-+.... .+   +...|
T Consensus       131 --------------------------------------~qfs~dEsl~arlv~nev~f~~~~~f~~~~~-kl---~~~~i  168 (566)
T KOG2315|consen  131 --------------------------------------PQFSIDESLAARLVSNEVQFYDLGSFKTIQH-KL---SVSGI  168 (566)
T ss_pred             --------------------------------------cccccchhhhhhhhcceEEEEecCCccceee-ee---eccce
Confidence                                                  2222222333 33678899999877432221 22   66779


Q ss_pred             EEEEEcCCC--CeEEEE----eCCCCcEEEEECCcceeeeee---ccccccEEEEEec--C-CEEEEee--cC-------
Q psy14511        245 SCVAWKPRT--TDLAVT----NTCTEYIDLWHEQEERLIQKL---RTHMHQVIAMCWN--G-NLLSCGT--IG-------  303 (488)
Q Consensus       245 ~~~~~~~~~--~~l~~~----~~~~~~i~i~d~~~~~~~~~~---~~~~~~v~~~~~~--~-~~l~~~~--~d-------  303 (488)
                      +.+.++|..  ..+++-    .+.-+.++||.......-..+   .-....-..+.|+  | .+|+.++  -|       
T Consensus       169 ~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~~~a~ksFFkadkvqm~WN~~gt~LLvLastdVDktn~SYY  248 (566)
T KOG2315|consen  169 TMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQHQPVANKSFFKADKVQMKWNKLGTALLVLASTDVDKTNASYY  248 (566)
T ss_pred             eeEEecCCCCCceEEEEccCCCCCCcEEEEeccccccccchhhhccccccceeEEEeccCCceEEEEEEEeecCCCcccc
Confidence            999999874  233331    245668999987632111111   1123334556664  2 2333322  22       


Q ss_pred             --CeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe--c-CeEEEEECCCCCCCccccee---eeeecCCCCE
Q psy14511        304 --GNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--N-NTVKIWDFRQLDAKRPLGLI---VPKLKREGRE  375 (488)
Q Consensus       304 --g~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--d-~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~  375 (488)
                        ..++++++..  .....-....++|.++.|+|+++-++++-  - -.+.|||++-.- ...+..-   ..-|+|.|++
T Consensus       249 GEq~Lyll~t~g--~s~~V~L~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~~~-v~df~egpRN~~~fnp~g~i  325 (566)
T KOG2315|consen  249 GEQTLYLLATQG--ESVSVPLLKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRGKP-VFDFPEGPRNTAFFNPHGNI  325 (566)
T ss_pred             ccceEEEEEecC--ceEEEecCCCCCceEEEECCCCCEEEEEEecccceEEEEcCCCCE-eEeCCCCCccceEECCCCCE
Confidence              3677888772  22333334578999999999998887765  3 899999987431 1111111   2289999999


Q ss_pred             EEEE-ccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeC------CCcEEEEecCCCCccccccccCC
Q psy14511        376 LVTS-HGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASA------DETISIWNCFPRDKKRKARQVGS  448 (488)
Q Consensus       376 l~~~-~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~------dg~v~iw~~~~~~~~~~~~~~~~  448 (488)
                      ++.+ -|...|.+.+||+.+.+++..+.....  +-+.|+|||++++|+..      |+.++||++........ ....+
T Consensus       326 i~lAGFGNL~G~mEvwDv~n~K~i~~~~a~~t--t~~eW~PdGe~flTATTaPRlrvdNg~KiwhytG~~l~~~-~f~sE  402 (566)
T KOG2315|consen  326 ILLAGFGNLPGDMEVWDVPNRKLIAKFKAANT--TVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYTGSLLHEK-MFKSE  402 (566)
T ss_pred             EEEeecCCCCCceEEEeccchhhccccccCCc--eEEEEcCCCcEEEEEeccccEEecCCeEEEEecCceeehh-hhhHh
Confidence            9886 355679999999999998888876544  56899999999999874      68899999875543322 11225


Q ss_pred             cceEEeec
Q psy14511        449 GSSLEFAI  456 (488)
Q Consensus       449 v~~~~~s~  456 (488)
                      ...+.|-|
T Consensus       403 L~qv~W~P  410 (566)
T KOG2315|consen  403 LLQVEWRP  410 (566)
T ss_pred             Hhheeeee
Confidence            56667765

>KOG0644|consensus

Probab=99.79  E-value=3.6e-19  Score=161.38  Aligned_cols=221  Identities=19%  Similarity=0.267  Sum_probs=166.3

Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcC-CCcc-
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRT-HSDY-  317 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~-  317 (488)
                      |.+.|+.++.+.+...++++ +.|..|++|.+..+.++..+.+|.+.|++++|....  +.+.||++++||.+- .... 
T Consensus       231 hs~ditdlavs~~n~~iaaa-S~D~vIrvWrl~~~~pvsvLrghtgavtaiafsP~~--sss~dgt~~~wd~r~~~~~y~  307 (1113)
T KOG0644|consen  231 HSGDITDLAVSSNNTMIAAA-SNDKVIRVWRLPDGAPVSVLRGHTGAVTAIAFSPRA--SSSDDGTCRIWDARLEPRIYV  307 (1113)
T ss_pred             Cccccchhccchhhhhhhhc-ccCceEEEEecCCCchHHHHhccccceeeeccCccc--cCCCCCceEeccccccccccC
Confidence            77788899988887777777 999999999999999999999999999999997655  778899999999882 1100 


Q ss_pred             -ceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCc
Q psy14511        318 -PTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRL  395 (488)
Q Consensus       318 -~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~  395 (488)
                       ........+-+.++.|...+.-+++++ ++.-..|.+.........-.++..-+-...+.++  .-.+..+++|++.+|
T Consensus       308 prp~~~~~~~~~~s~~~~~~~~~f~Tgs~d~ea~n~e~~~l~~~~~~lif~t~ssd~~~~~~~--ar~~~~~~vwnl~~g  385 (1113)
T KOG0644|consen  308 PRPLKFTEKDLVDSILFENNGDRFLTGSRDGEARNHEFEQLAWRSNLLIFVTRSSDLSSIVVT--ARNDHRLCVWNLYTG  385 (1113)
T ss_pred             CCCCCcccccceeeeeccccccccccccCCcccccchhhHhhhhccceEEEecccccccccee--eeeeeEeeeeecccc
Confidence             001111234567788888888999999 4888888776432222221222211111233333  456778999999999


Q ss_pred             ceeEEEeeccccEEEEEEcCCC-CEEEEEeCCCcEEEEecCCCCcccc-ccccCCcceEEeecCCCceEEEE
Q psy14511        396 HLIEELKIHQERILSAVLSPDQ-TCVAAASADETISIWNCFPRDKKRK-ARQVGSGSSLEFAILKQPVSLTA  465 (488)
Q Consensus       396 ~~~~~~~~~~~~v~~~~~s~~~-~~l~t~~~dg~v~iw~~~~~~~~~~-~~~~~~v~~~~~s~~~~~~~~~~  465 (488)
                      .++..+.+|...+..+.++|-+ +...+++.||...|||+..+-+++. ....+++..-+||+||..+++..
T Consensus       386 ~l~H~l~ghsd~~yvLd~Hpfn~ri~msag~dgst~iwdi~eg~pik~y~~gh~kl~d~kFSqdgts~~lsd  457 (1113)
T KOG0644|consen  386 QLLHNLMGHSDEVYVLDVHPFNPRIAMSAGYDGSTIIWDIWEGIPIKHYFIGHGKLVDGKFSQDGTSIALSD  457 (1113)
T ss_pred             hhhhhhcccccceeeeeecCCCcHhhhhccCCCceEeeecccCCcceeeecccceeeccccCCCCceEecCC
Confidence            9999999999999999999955 4556899999999999999888743 22356777889999999997754

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.78  E-value=2.4e-16  Score=140.17  Aligned_cols=293  Identities=13%  Similarity=0.094  Sum_probs=185.3

Q ss_pred             CcEEEEe-c-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCC
Q psy14511         48 GRYLASG-S-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDS  125 (488)
Q Consensus        48 g~~las~-~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~  125 (488)
                      +++++.. . ++.|.|.|..+.+   .+..+......-..+.|+|||+++++++.   |+.|.++|+.+++.+.++..  
T Consensus         5 ~~l~~V~~~~~~~v~viD~~t~~---~~~~i~~~~~~h~~~~~s~Dgr~~yv~~r---dg~vsviD~~~~~~v~~i~~--   76 (369)
T PF02239_consen    5 GNLFYVVERGSGSVAVIDGATNK---VVARIPTGGAPHAGLKFSPDGRYLYVANR---DGTVSVIDLATGKVVATIKV--   76 (369)
T ss_dssp             GGEEEEEEGGGTEEEEEETTT-S---EEEEEE-STTEEEEEE-TT-SSEEEEEET---TSEEEEEETTSSSEEEEEE---
T ss_pred             ccEEEEEecCCCEEEEEECCCCe---EEEEEcCCCCceeEEEecCCCCEEEEEcC---CCeEEEEECCcccEEEEEec--
Confidence            3455444 3 8999999988744   33333333333455789999999998876   99999999988875544432  


Q ss_pred             CccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeee
Q psy14511        126 QQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLD  205 (488)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (488)
                                                                                                      
T Consensus        77 --------------------------------------------------------------------------------   76 (369)
T PF02239_consen   77 --------------------------------------------------------------------------------   76 (369)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccc--
Q psy14511        206 WGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTH--  283 (488)
Q Consensus       206 ~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~--  283 (488)
                                                         .....++++++||+++++++...+.+.++|.++.+.++.+...  
T Consensus        77 -----------------------------------G~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~  121 (369)
T PF02239_consen   77 -----------------------------------GGNPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGM  121 (369)
T ss_dssp             -----------------------------------SSEEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE
T ss_pred             -----------------------------------CCCcceEEEcCCCCEEEEEecCCCceeEeccccccceeecccccc
Confidence                                               2346789999999999999778999999999999888887542  


Q ss_pred             -----cccEEEEEe--cCC-EEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-c-CeEEEEEC
Q psy14511        284 -----MHQVIAMCW--NGN-LLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-N-NTVKIWDF  353 (488)
Q Consensus       284 -----~~~v~~~~~--~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d-~~i~iwd~  353 (488)
                           ...+.++..  ... ++++.-+.+.|.+.|......................|+|++++++.+. . +.+-++|.
T Consensus       122 ~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~  201 (369)
T PF02239_consen  122 PVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLKVTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDT  201 (369)
T ss_dssp             -TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEEEEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEET
T ss_pred             cccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccceeeecccccccccccCcccceeeecccccceeEEEee
Confidence                 235556654  344 5555555688988898776444434444455678899999999988776 3 89999999


Q ss_pred             CCCCCCccccee--------eeeecC----------CCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcC
Q psy14511        354 RQLDAKRPLGLI--------VPKLKR----------EGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSP  415 (488)
Q Consensus       354 ~~~~~~~~~~~~--------~~~~~~----------~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~  415 (488)
                      ++.+....+..-        ..-.+|          .+...+...|  ...+.+||..+.+.++++.....+ ..+..+|
T Consensus       202 ~~~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~~~~~~ig--~~~v~v~d~~~wkvv~~I~~~G~g-lFi~thP  278 (369)
T PF02239_consen  202 KTGKLVALIDTGKKPHPGPGANFPHPGFGPVWATSGLGYFAIPLIG--TDPVSVHDDYAWKVVKTIPTQGGG-LFIKTHP  278 (369)
T ss_dssp             TTTEEEEEEE-SSSBEETTEEEEEETTTEEEEEEEBSSSSEEEEEE----TTT-STTTBTSEEEEEE-SSSS---EE--T
T ss_pred             ccceEEEEeeccccccccccccccCCCcceEEeeccccceeccccc--CCccccchhhcCeEEEEEECCCCc-ceeecCC
Confidence            877543322111        001122          2222222212  234557888889999999987776 8888999


Q ss_pred             CCCEEEEE----eCCCcEEEEecCCCCcccccccc--CCcceEEeecCCCceEEEEe
Q psy14511        416 DQTCVAAA----SADETISIWNCFPRDKKRKARQV--GSGSSLEFAILKQPVSLTAL  466 (488)
Q Consensus       416 ~~~~l~t~----~~dg~v~iw~~~~~~~~~~~~~~--~~v~~~~~s~~~~~~~~~~~  466 (488)
                      +++++.+.    ...+.|.++|.++.+........  ..+..+.|+++|+.+.++..
T Consensus       279 ~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~~~~~~h~ef~~dG~~v~vS~~  335 (369)
T PF02239_consen  279 DSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPGPGKRVVHMEFNPDGKEVWVSVW  335 (369)
T ss_dssp             T-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHHHT--EEEEEE-TTSSEEEEEEE
T ss_pred             CCccEEeeccCCCCCceEEEEECcCcceeEEEeccCCCcEeccEECCCCCEEEEEEe
Confidence            99999988    45589999999998766444333  34899999999998866554

...

>KOG0322|consensus

Probab=99.78  E-value=1.4e-17  Score=130.96  Aligned_cols=277  Identities=14%  Similarity=0.174  Sum_probs=172.9

Q ss_pred             ceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCcccccccccceeE
Q psy14511          6 NLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKA   85 (488)
Q Consensus         6 ~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~   85 (488)
                      .+|.+|..-|.|.+|++.+.......-..|+..|+.+.--|+++++.-|-|+.+.+|++.-..   .   ..-|+-.+++
T Consensus        26 ~rL~sg~~~G~V~~w~lqt~r~~~~~r~~g~~~it~lq~~p~d~l~tqgRd~~L~lw~ia~s~---~---i~i~Si~~ns   99 (323)
T KOG0322|consen   26 ERLMSGLSVGIVKMWVLQTERDLPLIRLFGRLFITNLQSIPNDSLDTQGRDPLLILWTIAYSA---F---ISIHSIVVNS   99 (323)
T ss_pred             hhhhcccccceEEEEEeecCccchhhhhhccceeeceeecCCcchhhcCCCceEEEEEccCcc---e---EEEeeeeccc
Confidence            458889999999999999988665543478889999999998655544559999999987422   1   2236667788


Q ss_pred             EEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecccccc
Q psy14511         86 IAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRT  165 (488)
Q Consensus        86 l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (488)
                      +.|.+..  +..-+..  .-..-.++-+...........  ......+..+.                            
T Consensus       100 lgFCrfS--l~~~~k~--~eqll~yp~rgsde~h~~D~g--~~tqv~i~dd~----------------------------  145 (323)
T KOG0322|consen  100 LGFCRFS--LVKKPKN--SEQLLEYPSRGSDETHKQDGG--DTTQVQIADDS----------------------------  145 (323)
T ss_pred             cccccce--eccCCCc--chhheecCCcccchhhhhccC--ccceeEccCch----------------------------
Confidence            8887643  2222210  001111211111110000000  00000000000                            


Q ss_pred             ccceeeecccccccccccCCCceeecCCCccccceeeeeee----CCCc-EEEEECCCeEEEEECCCCceEEEE------
Q psy14511        166 VSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDW----GYHD-TLAVALDTSVYTWNTKTNKTQLLV------  234 (488)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~d~~v~iw~~~~~~~~~~~------  234 (488)
                                                  +....-.+.+..+    ...- ++++-.+|.+.+||+.++.....+      
T Consensus       146 ----------------------------~~~Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv  197 (323)
T KOG0322|consen  146 ----------------------------ERSKLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKV  197 (323)
T ss_pred             ----------------------------hccccCceeeeeccccccceEEEEEeccCCeEEEEEccCCceeecccccccc
Confidence                                        0000000011111    1122 444559999999999987432211      


Q ss_pred             --ecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcc--ee--eeeeccccccEE--EEEecCCEEEEeecCCeE
Q psy14511        235 --EYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEE--RL--IQKLRTHMHQVI--AMCWNGNLLSCGTIGGNI  306 (488)
Q Consensus       235 --~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~--~~--~~~~~~~~~~v~--~~~~~~~~l~~~~~dg~i  306 (488)
                        .... |.+++.++.|.+.-..=+.+ +.+..+..|+++..  .+  -..+......+.  .+..|++.+++++.|+.|
T Consensus       198 ~~~~as-h~qpvlsldyas~~~rGisg-ga~dkl~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~Ri  275 (323)
T KOG0322|consen  198 ESPNAS-HKQPVLSLDYASSCDRGISG-GADDKLVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRI  275 (323)
T ss_pred             ccchhh-ccCcceeeeechhhcCCcCC-CccccceeeeeccccCcccccceEEecCCCccceEEccCCcEEeecccCCcE
Confidence              1122 78899999998766666666 77778888887643  11  111122223344  455599999999999999


Q ss_pred             EEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEEC
Q psy14511        307 LHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDF  353 (488)
Q Consensus       307 ~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~  353 (488)
                      ++|..++. .++..+..|...|++++|+|+...+|.++ |+.|.+|++
T Consensus       276 RVyswrtl-~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL  322 (323)
T KOG0322|consen  276 RVYSWRTL-NPLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL  322 (323)
T ss_pred             EEEEeccC-CchhhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence            99999986 58889999999999999999999999999 799999986

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.78  E-value=6.5e-16  Score=138.40  Aligned_cols=251  Identities=9%  Similarity=0.064  Sum_probs=164.3

Q ss_pred             EEEEECCCeEEEEECCC-CceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCc-cee--eeeecccccc
Q psy14511        211 TLAVALDTSVYTWNTKT-NKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE-ERL--IQKLRTHMHQ  286 (488)
Q Consensus       211 ~~~~~~d~~v~iw~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~-~~~--~~~~~~~~~~  286 (488)
                      +++...++.|.+|++.+ ++.......+  .......++++|++++|++++..++.|.+|+++. ++.  +.... ....
T Consensus         5 y~~~~~~~~I~~~~~~~~g~l~~~~~~~--~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~-~~~~   81 (330)
T PRK11028          5 YIASPESQQIHVWNLNHEGALTLLQVVD--VPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESP-LPGS   81 (330)
T ss_pred             EEEcCCCCCEEEEEECCCCceeeeeEEe--cCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeec-CCCC
Confidence            34445899999999974 4433222222  3355778999999999988756789999999863 322  22222 2234


Q ss_pred             EEEEEe--cCCEEEEeec-CCeEEEEECcCCCccceee--ecCCccEEEEEEccCCcEEEEEe-c-CeEEEEECCCCCCC
Q psy14511        287 VIAMCW--NGNLLSCGTI-GGNILHYDVRTHSDYPTAI--TREGDVVCGLKWSPNGRYLASGS-N-NTVKIWDFRQLDAK  359 (488)
Q Consensus       287 v~~~~~--~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~--~~~~~~i~~~~~s~~~~~l~~~~-d-~~i~iwd~~~~~~~  359 (488)
                      ...+.+  +++++++++. ++.|.+|++.+........  ..+......++++|+++++++++ . +.|.+||+.+....
T Consensus        82 p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l  161 (330)
T PRK11028         82 PTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIEGLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHL  161 (330)
T ss_pred             ceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeeccCCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcc
Confidence            456666  6777777654 7899999997533221111  12223467789999999997776 4 99999999763221


Q ss_pred             cc-----cce------eeeeecCCCCEEEEEccCCCCeEEEEeCCC--c--ceeEEEeecc------ccEEEEEEcCCCC
Q psy14511        360 RP-----LGL------IVPKLKREGRELVTSHGKQDCSLKMWEYPR--L--HLIEELKIHQ------ERILSAVLSPDQT  418 (488)
Q Consensus       360 ~~-----~~~------~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~--~--~~~~~~~~~~------~~v~~~~~s~~~~  418 (488)
                      ..     ...      ....|+|+|++++++ ...+++|.+|++..  +  +.+..+..+.      .....+.++||++
T Consensus       162 ~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~-~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~  240 (330)
T PRK11028        162 VAQEPAEVTTVEGAGPRHMVFHPNQQYAYCV-NELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGR  240 (330)
T ss_pred             cccCCCceecCCCCCCceEEECCCCCEEEEE-ecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCC
Confidence            11     010      122899999999885 34589999999973  3  3344443221      1234689999999


Q ss_pred             EEEEEeC-CCcEEEEecCCCCc-ccccc---ccCCcceEEeecCCCceEEEE
Q psy14511        419 CVAAASA-DETISIWNCFPRDK-KRKAR---QVGSGSSLEFAILKQPVSLTA  465 (488)
Q Consensus       419 ~l~t~~~-dg~v~iw~~~~~~~-~~~~~---~~~~v~~~~~s~~~~~~~~~~  465 (488)
                      +|+++.. ++.|.+|++.+... .....   .......+.|+|+|+.+....
T Consensus       241 ~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~~~~p~~~~~~~dg~~l~va~  292 (330)
T PRK11028        241 HLYACDRTASLISVFSVSEDGSVLSFEGHQPTETQPRGFNIDHSGKYLIAAG  292 (330)
T ss_pred             EEEEecCCCCeEEEEEEeCCCCeEEEeEEEeccccCCceEECCCCCEEEEEE
Confidence            9998864 78999999975432 22222   223456899999999986543

>KOG1587|consensus

Probab=99.78  E-value=1.2e-16  Score=145.86  Aligned_cols=263  Identities=16%  Similarity=0.243  Sum_probs=184.3

Q ss_pred             CeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCcccccccccc
Q psy14511         57 NTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYR  136 (488)
Q Consensus        57 ~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~  136 (488)
                      +.+.||+++........  +. -...|.++.|+|..+.++++|.  ++|.|.+||+..+.....                
T Consensus       222 ~~~~vW~~~~p~~Pe~~--~~-~~s~v~~~~f~p~~p~ll~gG~--y~GqV~lWD~~~~~~~~~----------------  280 (555)
T KOG1587|consen  222 GVLLVWSLKNPNTPELV--LE-SPSEVTCLKFCPFDPNLLAGGC--YNGQVVLWDLRKGSDTPP----------------  280 (555)
T ss_pred             ceEEEEecCCCCCceEE--Ee-cCCceeEEEeccCCcceEEeec--cCceEEEEEccCCCCCCC----------------
Confidence            47999999874222222  22 3578999999999999999998  599999999987653100                


Q ss_pred             ccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEEC
Q psy14511        137 EQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVAL  216 (488)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (488)
                                                                                                      
T Consensus       281 --------------------------------------------------------------------------------  280 (555)
T KOG1587|consen  281 --------------------------------------------------------------------------------  280 (555)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCe--EEEEeCCCCcEEEEECCcceeee-e--e---c------c
Q psy14511        217 DTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTD--LAVTNTCTEYIDLWHEQEERLIQ-K--L---R------T  282 (488)
Q Consensus       217 d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--l~~~~~~~~~i~i~d~~~~~~~~-~--~---~------~  282 (488)
                                .+..  . .... |..++..+.|..+...  ++++ +.||.|..|+++.-.... .  .   .      .
T Consensus       281 ----------s~ls--~-~~~s-h~~~v~~vvW~~~~~~~~f~s~-ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~  345 (555)
T KOG1587|consen  281 ----------SGLS--A-LEVS-HSEPVTAVVWLQNEHNTEFFSL-SSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSS  345 (555)
T ss_pred             ----------cccc--c-cccc-CCcCeEEEEEeccCCCCceEEE-ecCCcEeeeeccccccchhhcccccccccccccc
Confidence                      0000  0 0001 7788888888765544  8888 789999999876532211 1  0   0      1


Q ss_pred             ccccEEEEEe---cCCEEEEeecCCeEEEEECcCCC-------ccceeeecCCccEEEEEEccCCc-EEEEEecCeEEEE
Q psy14511        283 HMHQVIAMCW---NGNLLSCGTIGGNILHYDVRTHS-------DYPTAITREGDVVCGLKWSPNGR-YLASGSNNTVKIW  351 (488)
Q Consensus       283 ~~~~v~~~~~---~~~~l~~~~~dg~i~i~d~~~~~-------~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~d~~i~iw  351 (488)
                      ....++++.|   +.+.++.|+++|.|+.-+.....       +.......|.++|+.+.++|-+. .+.+++|..++||
T Consensus       346 ~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriW  425 (555)
T KOG1587|consen  346 KAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIW  425 (555)
T ss_pred             cccceeeEeeccCCCceEEEEcCCcEEEEEeccCCcccccccccccccccccCcceEeeecCCCccceeeeeccceeEec
Confidence            2335677888   68899999999999874433222       12345667889999999999774 5556669999999


Q ss_pred             ECC-CCCCCcccc-----eeeeeecCCCCEEEEEccCCCCeEEEEeCCC--cceeEEEeeccccEEEEEEcCCCCEEEEE
Q psy14511        352 DFR-QLDAKRPLG-----LIVPKLKREGRELVTSHGKQDCSLKMWEYPR--LHLIEELKIHQERILSAVLSPDQTCVAAA  423 (488)
Q Consensus       352 d~~-~~~~~~~~~-----~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~--~~~~~~~~~~~~~v~~~~~s~~~~~l~t~  423 (488)
                      ... .....-.+.     ..-.+|||....++++ +..+|.+.+||+..  .+++.+..-+....+.+.|+++|+.|+.|
T Consensus       426 s~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~-~d~~G~l~iWDLl~~~~~Pv~s~~~~~~~l~~~~~s~~g~~lavG  504 (555)
T KOG1587|consen  426 SEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFAT-VDGDGNLDIWDLLQDDEEPVLSQKVCSPALTRVRWSPNGKLLAVG  504 (555)
T ss_pred             cccCCCCcchhhhhccceeeeeEEcCcCceEEEE-EcCCCceehhhhhccccCCcccccccccccceeecCCCCcEEEEe
Confidence            987 332111111     1123999988777665 78899999999953  45666665566677888999999999999


Q ss_pred             eCCCcEEEEecCC
Q psy14511        424 SADETISIWNCFP  436 (488)
Q Consensus       424 ~~dg~v~iw~~~~  436 (488)
                      +..|.+.+|++..
T Consensus       505 d~~G~~~~~~l~~  517 (555)
T KOG1587|consen  505 DANGTTHILKLSE  517 (555)
T ss_pred             cCCCcEEEEEcCc
Confidence            9999999999964

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.78  E-value=4.2e-17  Score=150.40  Aligned_cols=227  Identities=14%  Similarity=0.151  Sum_probs=155.6

Q ss_pred             CCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCC--CCcEEEEECCccee--eeeeccccccEEEEEe
Q psy14511        217 DTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTC--TEYIDLWHEQEERL--IQKLRTHMHQVIAMCW  292 (488)
Q Consensus       217 d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~--~~~i~i~d~~~~~~--~~~~~~~~~~v~~~~~  292 (488)
                      +..|++||........+..    +...+..++|+|+|+.|+.++..  +..|++||+.+++.  +..+.++.   ..++|
T Consensus       183 ~~~i~i~d~dg~~~~~lt~----~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~~---~~~~w  255 (429)
T PRK01742        183 PYEVRVADYDGFNQFIVNR----SSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGHN---GAPAF  255 (429)
T ss_pred             eEEEEEECCCCCCceEecc----CCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCcc---CceeE
Confidence            4689999987765433222    66789999999999999887322  24699999987643  33343333   34556


Q ss_pred             --cCCEEEEee-cCCeEEEE--ECcCCCccceeeecCCccEEEEEEccCCcEEEEEec--CeEEEEECCCCCC-Ccccc-
Q psy14511        293 --NGNLLSCGT-IGGNILHY--DVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN--NTVKIWDFRQLDA-KRPLG-  363 (488)
Q Consensus       293 --~~~~l~~~~-~dg~i~i~--d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d--~~i~iwd~~~~~~-~~~~~-  363 (488)
                        ||+.|+.+. .+|.+.+|  |+..+  ....+..+...+...+|+|||+.|+..++  +...||++..... ...+. 
T Consensus       256 SPDG~~La~~~~~~g~~~Iy~~d~~~~--~~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l~~  333 (429)
T PRK01742        256 SPDGSRLAFASSKDGVLNIYVMGANGG--TPSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLVGG  333 (429)
T ss_pred             CCCCCEEEEEEecCCcEEEEEEECCCC--CeEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEecC
Confidence              788887764 67765555  55543  34556666667888999999998887763  7888887653221 11111 


Q ss_pred             -eeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecC--CCCcc
Q psy14511        364 -LIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCF--PRDKK  440 (488)
Q Consensus       364 -~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~--~~~~~  440 (488)
                       .....|+|||+.+++.  ..+ .+.+||+.+++.......+  ....+.|+|||++|++++.++.+.+|.+.  +++..
T Consensus       334 ~~~~~~~SpDG~~ia~~--~~~-~i~~~Dl~~g~~~~lt~~~--~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~G~~~  408 (429)
T PRK01742        334 RGYSAQISADGKTLVMI--NGD-NVVKQDLTSGSTEVLSSTF--LDESPSISPNGIMIIYSSTQGLGKVLQLVSADGRFK  408 (429)
T ss_pred             CCCCccCCCCCCEEEEE--cCC-CEEEEECCCCCeEEecCCC--CCCCceECCCCCEEEEEEcCCCceEEEEEECCCCce
Confidence             1234799999999885  334 4667999888754332222  34578899999999999999988888763  34433


Q ss_pred             -ccccccCCcceEEeecC
Q psy14511        441 -RKARQVGSGSSLEFAIL  457 (488)
Q Consensus       441 -~~~~~~~~v~~~~~s~~  457 (488)
                       ....+.+.+..++|+|-
T Consensus       409 ~~l~~~~g~~~~p~wsp~  426 (429)
T PRK01742        409 ARLPGSDGQVKFPAWSPY  426 (429)
T ss_pred             EEccCCCCCCCCcccCCC
Confidence             45567788899999984

>KOG0642|consensus

Probab=99.77  E-value=8.4e-18  Score=146.15  Aligned_cols=246  Identities=17%  Similarity=0.193  Sum_probs=167.8

Q ss_pred             CceEEEeecCCeEEEEEcccC-----c--ccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEecccc-------Cc
Q psy14511          5 GNLLSCGTIGGNILHYDVRTH-----S--DYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQL-------DA   69 (488)
Q Consensus         5 g~~la~g~~dg~i~iwd~~~~-----~--~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~-------~~   69 (488)
                      ...|++++.||++.+|++...     .  .....+.+|.++|.|++.++++..+.+|+ ||+|+.|++...       ..
T Consensus       306 ep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp  385 (577)
T KOG0642|consen  306 EPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQDPDDSYDP  385 (577)
T ss_pred             CCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCceeeeeccCCCCCcccccCc
Confidence            457899999999999999321     1  12245789999999999999999999999 999999966421       11


Q ss_pred             CCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEe
Q psy14511         70 KRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLH  149 (488)
Q Consensus        70 ~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (488)
                      ......+.||+..|+.+++++...+|+++++   ||+++.|+...... ..+.....             ....+.+...
T Consensus       386 ~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~---DgTvr~w~~~~~~~-~~f~~~~e-------------~g~Plsvd~~  448 (577)
T KOG0642|consen  386 SVLSGTLLGHTDAVWLLALSSTKDRLLSCSS---DGTVRLWEPTEESP-CTFGEPKE-------------HGYPLSVDRT  448 (577)
T ss_pred             chhccceeccccceeeeeecccccceeeecC---CceEEeeccCCcCc-cccCCccc-------------cCCcceEeec
Confidence            1233347889999999999998888888877   99999999765554 22221111             1111111100


Q ss_pred             eeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCc
Q psy14511        150 GFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNK  229 (488)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~  229 (488)
                      ..                                                       .....++...-+.-.+++.....
T Consensus       449 ss-------------------------------------------------------~~a~~~~s~~~~~~~~~~~ev~s  473 (577)
T KOG0642|consen  449 SS-------------------------------------------------------RPAHSLASFRFGYTSIDDMEVVS  473 (577)
T ss_pred             cc-------------------------------------------------------hhHhhhhhcccccccchhhhhhh
Confidence            00                                                       00111111122222233333333


Q ss_pred             eEEEEecCCC----CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecC
Q psy14511        230 TQLLVEYPTY----DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIG  303 (488)
Q Consensus       230 ~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d  303 (488)
                      ...++.....    ....+.-+.++|.+...+++ ..++.|+++|..++..+.....|...++++++  +|-+|++++.|
T Consensus       474 ~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~-hed~~Ir~~dn~~~~~l~s~~a~~~svtslai~~ng~~l~s~s~d  552 (577)
T KOG0642|consen  474 DLLIFESSASPGPRRYPQINKVVSHPTADITFTA-HEDRSIRFFDNKTGKILHSMVAHKDSVTSLAIDPNGPYLMSGSHD  552 (577)
T ss_pred             heeeccccCCCcccccCccceEEecCCCCeeEec-ccCCceecccccccccchheeeccceecceeecCCCceEEeecCC
Confidence            3333322110    22456778889999888888 99999999999999999999999999999999  68999999999


Q ss_pred             CeEEEEECcCCCccceeeecC
Q psy14511        304 GNILHYDVRTHSDYPTAITRE  324 (488)
Q Consensus       304 g~i~i~d~~~~~~~~~~~~~~  324 (488)
                      +.+++|.+... .+......|
T Consensus       553 ~sv~l~kld~k-~~~~es~~~  572 (577)
T KOG0642|consen  553 GSVRLWKLDVK-TCVLESTAH  572 (577)
T ss_pred             ceeehhhccch-heeeccccc
Confidence            99999999763 344333333

>KOG1524|consensus

Probab=99.77  E-value=7.6e-17  Score=139.45  Aligned_cols=254  Identities=15%  Similarity=0.205  Sum_probs=171.2

Q ss_pred             cccCceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCcccccccccceeEEEEe-------cCCCeEEeeeCCcccc
Q psy14511         33 TREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWC-------PWEPTLLATGGGICDQ  105 (488)
Q Consensus        33 ~~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~-------~~~~~l~~~~~~~~d~  105 (488)
                      ..|...|.|+.|+.....+.+++|..+.+|.-.+.+....+..+..  .-.+.+..-       .....++.+++   ||
T Consensus        11 ~r~~e~vc~v~w~~~eei~~~~dDh~~~~~~~~~~~s~~~~~~p~d--f~pt~~h~~~rs~~~g~~~d~~~i~s~---DG   85 (737)
T KOG1524|consen   11 NRNSEKVCCVDWSSNEEIYFVSDDHQIFKWSDVSRDSVEVAKLPDD--FVPTDMHLGGRSSGGGKGSDTLLICSN---DG   85 (737)
T ss_pred             cccceeEEeecccccceEEEeccCceEEEeecccchhhhhhhCCcc--cCCccccccccccCCCCCcceEEEEcC---Cc
Confidence            3677888999999999888888888777776544332222211110  000111110       11234566665   99


Q ss_pred             eEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCC
Q psy14511        106 TVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAK  185 (488)
Q Consensus       106 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (488)
                      .+.+.+ ..++..+.+..|...+.+..++++                                                 
T Consensus        86 kf~il~-k~~rVE~sv~AH~~A~~~gRW~~d-------------------------------------------------  115 (737)
T KOG1524|consen   86 RFVILN-KSARVERSISAHAAAISSGRWSPD-------------------------------------------------  115 (737)
T ss_pred             eEEEec-ccchhhhhhhhhhhhhhhcccCCC-------------------------------------------------
Confidence            998887 456655555555443333222222                                                 


Q ss_pred             CceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCc
Q psy14511        186 PERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEY  265 (488)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~  265 (488)
                                            +..+++++.||.|++|.-... ....+..   ...+|.|++|.|+.+.++.+  ..+.
T Consensus       116 ----------------------GtgLlt~GEDG~iKiWSrsGM-LRStl~Q---~~~~v~c~~W~p~S~~vl~c--~g~h  167 (737)
T KOG1524|consen  116 ----------------------GAGLLTAGEDGVIKIWSRSGM-LRSTVVQ---NEESIRCARWAPNSNSIVFC--QGGH  167 (737)
T ss_pred             ----------------------CceeeeecCCceEEEEeccch-HHHHHhh---cCceeEEEEECCCCCceEEe--cCCe
Confidence                                  246899999999999985432 2221111   56789999999999988887  6677


Q ss_pred             EEEEECCcceeeeeeccccccEEEEEec--CCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEE
Q psy14511        266 IDLWHEQEERLIQKLRTHMHQVIAMCWN--GNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASG  343 (488)
Q Consensus       266 i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~  343 (488)
                      +.|=.+.....+..+++|.+-|.+++|+  .+++++|++|-..++||...  ..+..-..|+-+|++++|.|+ +.++.+
T Consensus       168 ~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~G--~~Lf~S~~~ey~ITSva~npd-~~~~v~  244 (737)
T KOG1524|consen  168 ISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQG--ANLFTSAAEEYAITSVAFNPE-KDYLLW  244 (737)
T ss_pred             EEEeecccccceeEEeccCcEEEEeecCccccceeecCCceeEEeecccC--cccccCChhccceeeeeeccc-cceeee
Confidence            8888888777888899999999999994  78999999999999999874  466777788999999999999 777777


Q ss_pred             ecCeEEEEECCCCCCCcccceeeeeecCCCCEEEE
Q psy14511        344 SNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVT  378 (488)
Q Consensus       344 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~  378 (488)
                      +-+++++=..+.+      ..+.-+||+||..++.
T Consensus       245 S~nt~R~~~p~~G------SifnlsWS~DGTQ~a~  273 (737)
T KOG1524|consen  245 SYNTARFSSPRVG------SIFNLSWSADGTQATC  273 (737)
T ss_pred             eeeeeeecCCCcc------ceEEEEEcCCCceeec
Confidence            6566652221111      1222366666666666

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.77  E-value=3.2e-17  Score=151.20  Aligned_cols=165  Identities=13%  Similarity=0.135  Sum_probs=116.2

Q ss_pred             EEEEcCCCCeEEEEeCCCCcEEEE--ECCcceeeeeeccccccEEEEEe--cCCEEEEee-cCCeEEEEECcCCCcccee
Q psy14511        246 CVAWKPRTTDLAVTNTCTEYIDLW--HEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGT-IGGNILHYDVRTHSDYPTA  320 (488)
Q Consensus       246 ~~~~~~~~~~l~~~~~~~~~i~i~--d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~-~dg~i~i~d~~~~~~~~~~  320 (488)
                      .++|+|||+.|+++...+|.+.||  |+.+++ ...+..+...+....|  ||+.|+..+ .+|...+|++.........
T Consensus       252 ~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~  330 (429)
T PRK01742        252 APAFSPDGSRLAFASSKDGVLNIYVMGANGGT-PSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASL  330 (429)
T ss_pred             ceeECCCCCEEEEEEecCCcEEEEEEECCCCC-eEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEE
Confidence            579999999998874567876655  665544 4455556666777777  787766554 5788888887543333333


Q ss_pred             eecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCccc---ceeeeeecCCCCEEEEEccCCCCeEEEEeC--CCc
Q psy14511        321 ITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPL---GLIVPKLKREGRELVTSHGKQDCSLKMWEY--PRL  395 (488)
Q Consensus       321 ~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~---~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~--~~~  395 (488)
                      + .+..  ...+|+|||++|+..+...+.+||+.+++.....   ......|+|+|+.++++  +.++...+|++  .++
T Consensus       331 l-~~~~--~~~~~SpDG~~ia~~~~~~i~~~Dl~~g~~~~lt~~~~~~~~~~sPdG~~i~~~--s~~g~~~~l~~~~~~G  405 (429)
T PRK01742        331 V-GGRG--YSAQISADGKTLVMINGDNVVKQDLTSGSTEVLSSTFLDESPSISPNGIMIIYS--STQGLGKVLQLVSADG  405 (429)
T ss_pred             e-cCCC--CCccCCCCCCEEEEEcCCCEEEEECCCCCeEEecCCCCCCCceECCCCCEEEEE--EcCCCceEEEEEECCC
Confidence            3 3333  4578999999999887655667999877533211   11233899999999994  55777777765  467


Q ss_pred             ceeEEEeeccccEEEEEEcCC
Q psy14511        396 HLIEELKIHQERILSAVLSPD  416 (488)
Q Consensus       396 ~~~~~~~~~~~~v~~~~~s~~  416 (488)
                      +..+.+.+|.+.+..++|||-
T Consensus       406 ~~~~~l~~~~g~~~~p~wsp~  426 (429)
T PRK01742        406 RFKARLPGSDGQVKFPAWSPY  426 (429)
T ss_pred             CceEEccCCCCCCCCcccCCC
Confidence            888889888888999999984

>KOG2110|consensus

Probab=99.77  E-value=5.4e-16  Score=128.12  Aligned_cols=218  Identities=14%  Similarity=0.170  Sum_probs=163.3

Q ss_pred             CCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEecCCEEEEeecC--CeEEEEECcCCCccc
Q psy14511        241 NAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIG--GNILHYDVRTHSDYP  318 (488)
Q Consensus       241 ~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d--g~i~i~d~~~~~~~~  318 (488)
                      ...+..+.|+.+...|.+| +.+| .++|.................|..+-|...+++..+.+  +.+++++.+......
T Consensus         5 ~~ti~~~~~Nqd~~~lsvG-s~~G-yk~~~~~~~~k~~~~~~~~~~IvEmLFSSSLvaiV~~~qpr~Lkv~~~Kk~~~IC   82 (391)
T KOG2110|consen    5 KPTINFIGFNQDSTLLSVG-SKDG-YKIFSCSPFEKCFSKDTEGVSIVEMLFSSSLVAIVSIKQPRKLKVVHFKKKTTIC   82 (391)
T ss_pred             CcceeeeeeccceeEEEcc-CCCc-eeEEecCchHHhhcccCCCeEEEEeecccceeEEEecCCCceEEEEEcccCceEE
Confidence            4456777798888777777 7776 56777665433223333445667777787787777665  458899988653222


Q ss_pred             eeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCccccee------eeeecCCC--CEEEEEccCCCCeEEEE
Q psy14511        319 TAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLI------VPKLKREG--RELVTSHGKQDCSLKMW  390 (488)
Q Consensus       319 ~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~------~~~~~~~~--~~l~~~~g~~~~~i~i~  390 (488)
                      ....  ..+|.++.++  .+.|+++-...|+|||+++.+....+...      +.+++++.  .+++.-.....|.|.+|
T Consensus        83 e~~f--pt~IL~VrmN--r~RLvV~Lee~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~  158 (391)
T KOG2110|consen   83 EIFF--PTSILAVRMN--RKRLVVCLEESIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLF  158 (391)
T ss_pred             EEec--CCceEEEEEc--cceEEEEEcccEEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEE
Confidence            2222  3448888885  45677777777999999999777666555      33666654  59998766778999999


Q ss_pred             eCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCc-EEEEecCCCCccccccc---cCCcceEEeecCCCceEEE
Q psy14511        391 EYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADET-ISIWNCFPRDKKRKARQ---VGSGSSLEFAILKQPVSLT  464 (488)
Q Consensus       391 d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~-v~iw~~~~~~~~~~~~~---~~~v~~~~~s~~~~~~~~~  464 (488)
                      |..+.+.+..+.+|++++.+++|+++|.+|||+|+.|+ |||+.+.++++...+..   ...+.+++|+|+++.+.+.
T Consensus       159 d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~s  236 (391)
T KOG2110|consen  159 DTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAAS  236 (391)
T ss_pred             EcccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEe
Confidence            99999999999999999999999999999999999986 69999999998855433   3557899999999977543

>KOG0771|consensus

Probab=99.77  E-value=1.3e-17  Score=140.04  Aligned_cols=194  Identities=22%  Similarity=0.362  Sum_probs=136.7

Q ss_pred             EEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeee
Q psy14511         40 CGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEK  118 (488)
Q Consensus        40 ~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~  118 (488)
                      .+++|+++|..|++++ ||++|||++.+   ...+.....|.+.|.++.|+|||+.|++.+.   | ..+||+.++|..+
T Consensus       148 k~vaf~~~gs~latgg~dg~lRv~~~Ps---~~t~l~e~~~~~eV~DL~FS~dgk~lasig~---d-~~~VW~~~~g~~~  220 (398)
T KOG0771|consen  148 KVVAFNGDGSKLATGGTDGTLRVWEWPS---MLTILEEIAHHAEVKDLDFSPDGKFLASIGA---D-SARVWSVNTGAAL  220 (398)
T ss_pred             eEEEEcCCCCEeeeccccceEEEEecCc---chhhhhhHhhcCccccceeCCCCcEEEEecC---C-ceEEEEeccCchh
Confidence            7899999999999998 99999999876   4455556779999999999999999999987   8 9999999998544


Q ss_pred             eeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCcccc
Q psy14511        119 CHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIIND  198 (488)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (488)
                      .......                                                                         
T Consensus       221 a~~t~~~-------------------------------------------------------------------------  227 (398)
T KOG0771|consen  221 ARKTPFS-------------------------------------------------------------------------  227 (398)
T ss_pred             hhcCCcc-------------------------------------------------------------------------
Confidence            3322110                                                                         


Q ss_pred             ceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCC---C-eEEEEeCCCCcEEEEECCcc
Q psy14511        199 FYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRT---T-DLAVTNTCTEYIDLWHEQEE  274 (488)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~-~l~~~~~~~~~i~i~d~~~~  274 (488)
                                                               .+.....+.|+.++   . ++++.-...+.|+.|++...
T Consensus       228 -----------------------------------------k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w  266 (398)
T KOG0771|consen  228 -----------------------------------------KDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLW  266 (398)
T ss_pred             -----------------------------------------cchhhhhceecccCCCceEEEEEecCCCCceeEEEeeee
Confidence                                                     11112222333322   1 11111123334444443321


Q ss_pred             e-----eeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cC
Q psy14511        275 R-----LIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NN  346 (488)
Q Consensus       275 ~-----~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~  346 (488)
                      .     ..++.......+.+++.  +|++++.|+.||.|.+++..+.+......+.|...|+.+.|+||.+++++.+ +.
T Consensus       267 ~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~  346 (398)
T KOG0771|consen  267 SGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDN  346 (398)
T ss_pred             ccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEEEEEeceeeeeEeehhhheeeeeeEEEcCCcCcccccccCC
Confidence            1     11111123346777777  8999999999999999999987767777788999999999999999999877 67


Q ss_pred             eEEEEECC
Q psy14511        347 TVKIWDFR  354 (488)
Q Consensus       347 ~i~iwd~~  354 (488)
                      ...+..+.
T Consensus       347 ~~~v~~l~  354 (398)
T KOG0771|consen  347 EAAVTKLA  354 (398)
T ss_pred             ceeEEEEe
Confidence            77776654

>KOG1517|consensus

Probab=99.77  E-value=4.8e-16  Score=145.16  Aligned_cols=286  Identities=20%  Similarity=0.309  Sum_probs=195.6

Q ss_pred             cceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceec
Q psy14511         81 SAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLN  160 (488)
Q Consensus        81 ~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (488)
                      .+-..+.|+|-.+.++++..   ...|++||.+.++.+..+..+.....                               
T Consensus      1065 ~~pk~~~~hpf~p~i~~ad~---r~~i~vwd~e~~~~l~~F~n~~~~~t------------------------------- 1110 (1387)
T KOG1517|consen 1065 QPPKTLKFHPFEPQIAAADD---RERIRVWDWEKGRLLNGFDNGAFPDT------------------------------- 1110 (1387)
T ss_pred             CCCceeeecCCCceeEEcCC---cceEEEEecccCceeccccCCCCCCC-------------------------------
Confidence            35667889998888777775   67899999999987665554421000                               


Q ss_pred             cccccccceeeecccccccccccCCCceeecCCCccccceeeeeee----CCCcEEEEECCCeEEEEECCCC--ceEEEE
Q psy14511        161 QSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDW----GYHDTLAVALDTSVYTWNTKTN--KTQLLV  234 (488)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~d~~v~iw~~~~~--~~~~~~  234 (488)
                                                             .++.+.+    +...+++++.||.|++|+--..  +..+..
T Consensus      1111 ---------------------------------------~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~~~~~eLV 1151 (1387)
T KOG1517|consen 1111 ---------------------------------------RVSDLELINEQDDALLLTASSDGVIRIWKDYADKWKKPELV 1151 (1387)
T ss_pred             ---------------------------------------ccceeeeecccchhheeeeccCceEEEecccccccCCceeE
Confidence                                                   0111111    1246888999999999974332  111111


Q ss_pred             e--------cCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecc-ccccEEEEEe---cCCEEEEeec
Q psy14511        235 E--------YPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRT-HMHQVIAMCW---NGNLLSCGTI  302 (488)
Q Consensus       235 ~--------~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~-~~~~v~~~~~---~~~~l~~~~~  302 (488)
                      +        .++ ..+.-.-+.|.....+|+++ +.-..|+|||......+..+.. ....+++++.   .|+.+++|..
T Consensus      1152 Taw~~Ls~~~~~-~r~~~~v~dWqQ~~G~Ll~t-Gd~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfa 1229 (1387)
T KOG1517|consen 1152 TAWSSLSDQLPG-ARGTGLVVDWQQQSGHLLVT-GDVRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAAGFA 1229 (1387)
T ss_pred             EeeccccccCcc-CCCCCeeeehhhhCCeEEec-CCeeEEEEEecccceeEeecccCCCccceeecccccCCceEEEeec
Confidence            1        111 11112446787777888888 6788999999998877777654 4456777777   4799999999


Q ss_pred             CCeEEEEECcCCCc--cceeeecCCcc--EEEEEEccCCc-EEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEE
Q psy14511        303 GGNILHYDVRTHSD--YPTAITREGDV--VCGLKWSPNGR-YLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGREL  376 (488)
Q Consensus       303 dg~i~i~d~~~~~~--~~~~~~~~~~~--i~~~~~s~~~~-~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l  376 (488)
                      ||.+++||.+....  .+...+.|+..  |..+.+.+.|- .|++++ +|.|++||++....                  
T Consensus      1230 DGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~------------------ 1291 (1387)
T KOG1517|consen 1230 DGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSK------------------ 1291 (1387)
T ss_pred             CCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcc------------------
Confidence            99999999987543  56677888877  99999988764 477777 68899998885310                  


Q ss_pred             EEEccCCCCeEEEEeCCCcceeEEEeec---cccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcccc-------cccc
Q psy14511        377 VTSHGKQDCSLKMWEYPRLHLIEELKIH---QERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRK-------ARQV  446 (488)
Q Consensus       377 ~~~~g~~~~~i~i~d~~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~-------~~~~  446 (488)
                                         +...+...|   .+..+++..+++...+|+|+. +.|+||++...+....       ....
T Consensus      1292 -------------------e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~G~~l~~~k~n~~F~~q~~ 1351 (1387)
T KOG1517|consen 1292 -------------------ETFLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLSGEQLNIIKYNPGFMGQRI 1351 (1387)
T ss_pred             -------------------cccceeeeccccCccceeeeeccCCCeeeecCc-ceEEEEecChhhhcccccCcccccCcC
Confidence                               001111112   124899999999999999998 9999999987665422       2345


Q ss_pred             CCcceEEeecCCCceEEEEeeecccccceeeEEEEeeccc
Q psy14511        447 GSGSSLEFAILKQPVSLTALLRSRAVEKQQHAIAYTVFGE  486 (488)
Q Consensus       447 ~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~  486 (488)
                      +.+.+++|+|.-..+       +.+..|..+.|...+.++
T Consensus      1352 gs~scL~FHP~~~ll-------AaG~~Ds~V~iYs~~k~~ 1384 (1387)
T KOG1517|consen 1352 GSVSCLAFHPHRLLL-------AAGSADSTVSIYSCEKPR 1384 (1387)
T ss_pred             CCcceeeecchhHhh-------hhccCCceEEEeecCCcC
Confidence            678999999954444       445667777776655543

>KOG2111|consensus

Probab=99.74  E-value=3.8e-14  Score=115.03  Aligned_cols=301  Identities=14%  Similarity=0.233  Sum_probs=187.7

Q ss_pred             EEEEEEccCCcEEEEecCCeEEEEeccccCcCCCcccccccccc--eeEEEEecCCCeEEeeeCCc----ccceEEEEec
Q psy14511         39 VCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSA--VKAIAWCPWEPTLLATGGGI----CDQTVRLWNS  112 (488)
Q Consensus        39 V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~~--v~~l~~~~~~~~l~~~~~~~----~d~~i~vwd~  112 (488)
                      ...++|+.|..-++.|.|.-.+||+.+-.+.   ......+.+.  +..+-|-  .++++.+|+.+    ..+.+.|||=
T Consensus         8 ~lsvs~NQD~ScFava~~~Gfriyn~~P~ke---~~~r~~~~~G~~~veMLfR--~N~laLVGGg~~pky~pNkviIWDD   82 (346)
T KOG2111|consen    8 TLSVSFNQDHSCFAVATDTGFRIYNCDPFKE---SASRQFIDGGFKIVEMLFR--SNYLALVGGGSRPKYPPNKVIIWDD   82 (346)
T ss_pred             eeEEEEccCCceEEEEecCceEEEecCchhh---hhhhccccCchhhhhHhhh--hceEEEecCCCCCCCCCceEEEEec
Confidence            3459999999999999988899999875222   1111222222  2233333  44666666531    1357999995


Q ss_pred             CCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecC
Q psy14511        113 MNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEA  192 (488)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (488)
                      ...+++.++.....                                                                  
T Consensus        83 ~k~~~i~el~f~~~------------------------------------------------------------------   96 (346)
T KOG2111|consen   83 LKERCIIELSFNSE------------------------------------------------------------------   96 (346)
T ss_pred             ccCcEEEEEEeccc------------------------------------------------------------------
Confidence            55554444433211                                                                  


Q ss_pred             CCccccceeeeeeeCCCcEEEEECCCeEEEEECCC-CceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEEC
Q psy14511        193 PSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKT-NKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHE  271 (488)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~  271 (488)
                              +..+..+.+ .+++-.++.|++|...+ .+....+.... ......+++-..+...|+.-|-.-|.|+|-|+
T Consensus        97 --------I~~V~l~r~-riVvvl~~~I~VytF~~n~k~l~~~et~~-NPkGlC~~~~~~~k~~LafPg~k~GqvQi~dL  166 (346)
T KOG2111|consen   97 --------IKAVKLRRD-RIVVVLENKIYVYTFPDNPKLLHVIETRS-NPKGLCSLCPTSNKSLLAFPGFKTGQVQIVDL  166 (346)
T ss_pred             --------eeeEEEcCC-eEEEEecCeEEEEEcCCChhheeeeeccc-CCCceEeecCCCCceEEEcCCCccceEEEEEh
Confidence                    112222333 45555688999999884 44444444332 34445566655566677776677899999999


Q ss_pred             Cccee--eeeeccccccEEEEEe--cCCEEEEeecCCe-EEEEECcCCCccceeeec-CCccEEEEEEccCCcEEEEEec
Q psy14511        272 QEERL--IQKLRTHMHQVIAMCW--NGNLLSCGTIGGN-ILHYDVRTHSDYPTAITR-EGDVVCGLKWSPNGRYLASGSN  345 (488)
Q Consensus       272 ~~~~~--~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~-i~i~d~~~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~d  345 (488)
                      ...+.  ...+.+|...|.+++.  +|.++|+++..|+ |+|||..++......-++ ....|++++|||+..+||+++|
T Consensus       167 ~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSd  246 (346)
T KOG2111|consen  167 ASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAVSSD  246 (346)
T ss_pred             hhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEEEcC
Confidence            87554  4778899999999999  7999999999997 799999997543332222 2356999999999999999998


Q ss_pred             -CeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEe
Q psy14511        346 -NTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAAS  424 (488)
Q Consensus       346 -~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~  424 (488)
                       |+++|+.++.......-.   ...+.-.  ++.. -.-+.   .|      ....++-..++..-++|-.+.+.++..+
T Consensus       247 KgTlHiF~l~~~~~~~~~~---SSl~~~~--~~lp-ky~~S---~w------S~~~f~l~~~~~~~~~fg~~~nsvi~i~  311 (346)
T KOG2111|consen  247 KGTLHIFSLRDTENTEDES---SSLSFKR--LVLP-KYFSS---EW------SFAKFQLPQGTQCIIAFGSETNTVIAIC  311 (346)
T ss_pred             CCeEEEEEeecCCCCcccc---ccccccc--cccc-hhccc---ce------eEEEEEccCCCcEEEEecCCCCeEEEEE
Confidence             999999998754322200   0000000  0000 00000   01      1222333355667788887767777777


Q ss_pred             CCCcEEEEecC
Q psy14511        425 ADETISIWNCF  435 (488)
Q Consensus       425 ~dg~v~iw~~~  435 (488)
                      .||.-+=+.+.
T Consensus       312 ~Dgsy~k~~f~  322 (346)
T KOG2111|consen  312 ADGSYYKFKFD  322 (346)
T ss_pred             eCCcEEEEEec
Confidence            88876655444

>KOG2321|consensus

Probab=99.74  E-value=1.2e-15  Score=133.24  Aligned_cols=292  Identities=18%  Similarity=0.247  Sum_probs=202.2

Q ss_pred             CeEEEEEcccCcccceee-----------------------cccCceEEEEEEccCCcEEEEec--CCeEEEEeccccCc
Q psy14511         15 GNILHYDVRTHSDYPTAI-----------------------TREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDA   69 (488)
Q Consensus        15 g~i~iwd~~~~~~~~~~~-----------------------~~h~~~V~~l~~sp~g~~las~~--d~~i~vwd~~~~~~   69 (488)
                      +.|+||++..++.++..+                       -.|...-+.+..+|||+|+.+.+  ...|++||+.....
T Consensus         7 NdVkiYnvS~~kslP~Wls~r~kR~lkkd~~~~~rieLiQdfe~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSL   86 (703)
T KOG2321|consen    7 NDVKIYNVSAGKSLPDWLSDRRKRQLKKDVDYRQRIELIQDFEMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSL   86 (703)
T ss_pred             CceEEEEeecCCCchhhhhhHHHHHHhhchHHHHHHHHHHhcCCccccceeEecCCCcEEEEecccCCceEEEEccccee
Confidence            458899988766554322                       25677789999999999877665  89999999986322


Q ss_pred             CCCcccccccc--cceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEE
Q psy14511         70 KRPQVNNQCHL--SAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFL  147 (488)
Q Consensus        70 ~~~~~~~~~h~--~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (488)
                      .     +.-|.  ..|.-.-.+.|-..++....   |.+|.+..- -|.. ..+..+.                      
T Consensus        87 K-----FERhlDae~V~feiLsDD~SK~v~L~~---DR~IefHak-~G~h-y~~RIP~----------------------  134 (703)
T KOG2321|consen   87 K-----FERHLDAEVVDFEILSDDYSKSVFLQN---DRTIEFHAK-YGRH-YRTRIPK----------------------  134 (703)
T ss_pred             e-----eeecccccceeEEEeccchhhheEeec---Cceeeehhh-cCee-eeeecCc----------------------
Confidence            1     22232  34444444545444444444   777766542 1211 1111100                      


Q ss_pred             EeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCC
Q psy14511        148 LHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKT  227 (488)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~  227 (488)
                             -++-+.++                                           .-.-.++.++....|+-++++.
T Consensus       135 -------~GRDm~y~-------------------------------------------~~scDly~~gsg~evYRlNLEq  164 (703)
T KOG2321|consen  135 -------FGRDMKYH-------------------------------------------KPSCDLYLVGSGSEVYRLNLEQ  164 (703)
T ss_pred             -------CCcccccc-------------------------------------------CCCccEEEeecCcceEEEEccc
Confidence                   00000000                                           0124688889999999999999


Q ss_pred             CceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecc------ccc-----cEEEEEe--cC
Q psy14511        228 NKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRT------HMH-----QVIAMCW--NG  294 (488)
Q Consensus       228 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~------~~~-----~v~~~~~--~~  294 (488)
                      |+....+..   ....++++..++...+|++| +.+|.|..||.+....+..+..      |.+     .|+++.|  +|
T Consensus       165 GrfL~P~~~---~~~~lN~v~in~~hgLla~G-t~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~g  240 (703)
T KOG2321|consen  165 GRFLNPFET---DSGELNVVSINEEHGLLACG-TEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDG  240 (703)
T ss_pred             ccccccccc---ccccceeeeecCccceEEec-ccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCc
Confidence            998877776   45789999999999888888 9999999999998766655532      333     4899999  47


Q ss_pred             CEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccC--CcEEEEEecCeEEEEECCCCCCCcccceeee----e
Q psy14511        295 NLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPN--GRYLASGSNNTVKIWDFRQLDAKRPLGLIVP----K  368 (488)
Q Consensus       295 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~--~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~----~  368 (488)
                      -.+++|+.+|.+.|||++..+.....-....-+|..+.|.+.  +..+++.....++|||-.+++....+.....    |
T Consensus       241 L~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S~Dk~~~kiWd~~~Gk~~asiEpt~~lND~C  320 (703)
T KOG2321|consen  241 LHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLDWQDTDQQNKVVSMDKRILKIWDECTGKPMASIEPTSDLNDFC  320 (703)
T ss_pred             eeEEeeccCCcEEEEEcccCCceeecccCCccceeeecccccCCCceEEecchHHhhhcccccCCceeeccccCCcCcee
Confidence            889999999999999999976666666666788999999775  4566666569999999998865544433322    8


Q ss_pred             ecCCCCEEEEEccCCCCeEEEEeCCC
Q psy14511        369 LKREGRELVTSHGKQDCSLKMWEYPR  394 (488)
Q Consensus       369 ~~~~~~~l~~~~g~~~~~i~i~d~~~  394 (488)
                      +-|++-++++  +.++..+..|-++.
T Consensus       321 ~~p~sGm~f~--Ane~~~m~~yyiP~  344 (703)
T KOG2321|consen  321 FVPGSGMFFT--ANESSKMHTYYIPS  344 (703)
T ss_pred             eecCCceEEE--ecCCCcceeEEccc
Confidence            8888888888  56777777666654

>KOG2139|consensus

Probab=99.74  E-value=4.1e-15  Score=122.61  Aligned_cols=277  Identities=13%  Similarity=0.220  Sum_probs=180.4

Q ss_pred             ceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCC
Q psy14511         37 DVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNG  115 (488)
Q Consensus        37 ~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~  115 (488)
                      -.+..++|++.-.-+|++. |..|++||-+. +....+.  ......|++++|-|.+..-++.+.   .+-|.+|..+.-
T Consensus        99 ~dlr~~aWhqH~~~fava~nddvVriy~kss-t~pt~Lk--s~sQrnvtclawRPlsaselavgC---r~gIciW~~s~t  172 (445)
T KOG2139|consen   99 IDLRGVAWHQHIIAFAVATNDDVVRIYDKSS-TCPTKLK--SVSQRNVTCLAWRPLSASELAVGC---RAGICIWSDSRT  172 (445)
T ss_pred             cceeeEeechhhhhhhhhccCcEEEEeccCC-CCCceec--chhhcceeEEEeccCCcceeeeee---cceeEEEEcCcc
Confidence            3578899999655667776 99999999776 3222222  223468999999999888888887   788999986432


Q ss_pred             eee-eeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCC
Q psy14511        116 KEK-CHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPS  194 (488)
Q Consensus       116 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (488)
                      ... +.+..                                                                       
T Consensus       173 ln~~r~~~~-----------------------------------------------------------------------  181 (445)
T KOG2139|consen  173 LNANRNIRM-----------------------------------------------------------------------  181 (445)
T ss_pred             ccccccccc-----------------------------------------------------------------------
Confidence            100 00000                                                                       


Q ss_pred             ccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcc
Q psy14511        195 IINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEE  274 (488)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~  274 (488)
                                                     -+.....+++.++ | .+|+++.|.+||..+++++-.+..|.|||..++
T Consensus       182 -------------------------------~s~~~~qvl~~pg-h-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg  228 (445)
T KOG2139|consen  182 -------------------------------MSTHHLQVLQDPG-H-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTG  228 (445)
T ss_pred             -------------------------------ccccchhheeCCC-C-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCC
Confidence                                           0011122334443 3 789999999999999998777899999999998


Q ss_pred             eeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEE
Q psy14511        275 RLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWD  352 (488)
Q Consensus       275 ~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd  352 (488)
                      ..+.......+.+.-+.|  |+.+++++.-|+..++|..........-.. ..+.|...+|+|+|++|..+..+.-++|.
T Consensus       229 ~~~pL~~~glgg~slLkwSPdgd~lfaAt~davfrlw~e~q~wt~erw~l-gsgrvqtacWspcGsfLLf~~sgsp~lys  307 (445)
T KOG2139|consen  229 QKIPLIPKGLGGFSLLKWSPDGDVLFAATCDAVFRLWQENQSWTKERWIL-GSGRVQTACWSPCGSFLLFACSGSPRLYS  307 (445)
T ss_pred             CcccccccCCCceeeEEEcCCCCEEEEecccceeeeehhcccceecceec-cCCceeeeeecCCCCEEEEEEcCCceEEE
Confidence            776665445566777777  899999999999999997655333322222 33479999999999999988877777887


Q ss_pred             CCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCC-----
Q psy14511        353 FRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADE-----  427 (488)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg-----  427 (488)
                      +.-.+.......             .  ++....+-+-|+..-....--+--.+++.+++|.|.|.+||+.-..+     
T Consensus       308 l~f~~~~~~~~~-------------~--~~~k~~lliaDL~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~~~v~~  372 (445)
T KOG2139|consen  308 LTFDGEDSVFLR-------------P--QSIKRVLLIADLQEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQSFVLL  372 (445)
T ss_pred             EeecCCCccccC-------------c--ccceeeeeeccchhhhhhcCcccccCccceeeECCCCCEEEEEEcCCchhhh
Confidence            653321111100             0  11122222333321110000011246789999999999999865443     


Q ss_pred             ---cEEEEecCCCCc
Q psy14511        428 ---TISIWNCFPRDK  439 (488)
Q Consensus       428 ---~v~iw~~~~~~~  439 (488)
                         .|.+||......
T Consensus       373 ~k~~i~~fdtr~sp~  387 (445)
T KOG2139|consen  373 CKLHISRFDTRKSPP  387 (445)
T ss_pred             hhhhhhhhcccccCc
Confidence               366777664433

>KOG1334|consensus

Probab=99.74  E-value=2.3e-17  Score=140.84  Aligned_cols=285  Identities=16%  Similarity=0.188  Sum_probs=205.8

Q ss_pred             cCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEcc--CCcEEEEec-CCeEEEEeccccCcCCCccccccc
Q psy14511          3 WNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSP--NGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCH   79 (488)
Q Consensus         3 ~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp--~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h   79 (488)
                      ..|..|++|+.|..|.+||...+........+|...|.--.|-|  +.+-|++.+ ||.+++=.+...........+..|
T Consensus       152 ~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~i~~t~~~e~t~rl~~h  231 (559)
T KOG1334|consen  152 QRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSEILETGYVENTKRLAPH  231 (559)
T ss_pred             ccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceeeeeeccccceecceecccc
Confidence            36899999999999999999999888788889999999999988  355777777 999999877543333334456779


Q ss_pred             ccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeecccccee
Q psy14511         80 LSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVL  159 (488)
Q Consensus        80 ~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (488)
                      .++|.-++.-|+..+-+.++++  |+.+.-.|++.+.....+.........                             
T Consensus       232 ~g~vhklav~p~sp~~f~S~ge--D~~v~~~Dlr~~~pa~~~~cr~~~~~~-----------------------------  280 (559)
T KOG1334|consen  232 EGPVHKLAVEPDSPKPFLSCGE--DAVVFHIDLRQDVPAEKFVCREADEKE-----------------------------  280 (559)
T ss_pred             cCccceeeecCCCCCccccccc--ccceeeeeeccCCccceeeeeccCCcc-----------------------------
Confidence            9999999999988877766664  999999998877654333322110000                             


Q ss_pred             ccccccccceeeecccccccccccCCCceeecCCCccccceeeeeee-CCCcEEEEECCCeEEEEECCCCceE------E
Q psy14511        160 NQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDW-GYHDTLAVALDTSVYTWNTKTNKTQ------L  232 (488)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~v~iw~~~~~~~~------~  232 (488)
                                                          ....+...+.. ..+.+.+++.|..+++||.+.-...      .
T Consensus       281 ------------------------------------~v~L~~Ia~~P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~  324 (559)
T KOG1334|consen  281 ------------------------------------RVGLYTIAVDPRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLD  324 (559)
T ss_pred             ------------------------------------ceeeeeEecCCCCccccccCChhhhhhhhcccchhhccccchhh
Confidence                                                00000001111 2356778889999999997643221      1


Q ss_pred             EEe---cCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCc--c----------eeeee-eccccc--cEEEEEe--
Q psy14511        233 LVE---YPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE--E----------RLIQK-LRTHMH--QVIAMCW--  292 (488)
Q Consensus       233 ~~~---~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~--~----------~~~~~-~~~~~~--~v~~~~~--  292 (488)
                      .+.   +.......|++++|+.++.-++++ ..|-.|+++.-..  +          ..+.. +++|..  .|..+-|  
T Consensus       325 ~f~p~hl~~d~~v~ITgl~Ysh~~sElLaS-YnDe~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfG  403 (559)
T KOG1334|consen  325 KFCPHHLVEDDPVNITGLVYSHDGSELLAS-YNDEDIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFG  403 (559)
T ss_pred             hcCCccccccCcccceeEEecCCccceeee-ecccceEEeccccccCCCCCCCcchhhccchhhcccccccccceeeecc
Confidence            110   000145679999999888888888 8999999995332  2          22233 677754  5677777  


Q ss_pred             -cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCC
Q psy14511        293 -NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQL  356 (488)
Q Consensus       293 -~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~  356 (488)
                       ...++++|+.-|.|.||+-.++ ..+..+.+...-|+|+.-+|--..||+++ |..|+||-....
T Consensus       404 PrsEyVvSGSDCGhIFiW~K~t~-eii~~MegDr~VVNCLEpHP~~PvLAsSGid~DVKIWTP~~~  468 (559)
T KOG1334|consen  404 PRSEYVVSGSDCGHIFIWDKKTG-EIIRFMEGDRHVVNCLEPHPHLPVLASSGIDHDVKIWTPLTA  468 (559)
T ss_pred             CccceEEecCccceEEEEecchh-HHHHHhhcccceEeccCCCCCCchhhccCCccceeeecCCcc
Confidence             4689999999999999999885 46777777777899999999999999999 899999987544

>KOG2139|consensus

Probab=99.74  E-value=1.4e-15  Score=125.39  Aligned_cols=239  Identities=17%  Similarity=0.223  Sum_probs=149.4

Q ss_pred             EEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccC-CcEEEEecCCeEEEEeccccCc-CC----------Cccc
Q psy14511          8 LSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPN-GRYLASGSNNTVKIWDFRQLDA-KR----------PQVN   75 (488)
Q Consensus         8 la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~-g~~las~~d~~i~vwd~~~~~~-~~----------~~~~   75 (488)
                      +|++..|-+|++||-+... .......-...|+|++|-|. ++-|+.|..+-|.+|....... .+          .+..
T Consensus       113 fava~nddvVriy~ksst~-pt~Lks~sQrnvtclawRPlsaselavgCr~gIciW~~s~tln~~r~~~~~s~~~~qvl~  191 (445)
T KOG2139|consen  113 FAVATNDDVVRIYDKSSTC-PTKLKSVSQRNVTCLAWRPLSASELAVGCRAGICIWSDSRTLNANRNIRMMSTHHLQVLQ  191 (445)
T ss_pred             hhhhccCcEEEEeccCCCC-CceecchhhcceeEEEeccCCcceeeeeecceeEEEEcCcccccccccccccccchhhee
Confidence            5678889999999987732 32322334567999999995 5577778889999998753111 11          1222


Q ss_pred             ccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccc
Q psy14511         76 NQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDR  155 (488)
Q Consensus        76 ~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (488)
                      ..+| .+|++|+|.+||..+++++-.  |..|+|||.+++..+.........                            
T Consensus       192 ~pgh-~pVtsmqwn~dgt~l~tAS~g--sssi~iWdpdtg~~~pL~~~glgg----------------------------  240 (445)
T KOG2139|consen  192 DPGH-NPVTSMQWNEDGTILVTASFG--SSSIMIWDPDTGQKIPLIPKGLGG----------------------------  240 (445)
T ss_pred             CCCC-ceeeEEEEcCCCCEEeecccC--cceEEEEcCCCCCcccccccCCCc----------------------------
Confidence            3445 689999999999888877765  899999999998765443221111                            


Q ss_pred             cceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC--CCcEEEEECCCeEEEEECCCCceEEE
Q psy14511        156 KKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG--YHDTLAVALDTSVYTWNTKTNKTQLL  233 (488)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~v~iw~~~~~~~~~~  233 (488)
                                                                   ++.+.|+  ++.++++..|+..++|+....-....
T Consensus       241 ---------------------------------------------~slLkwSPdgd~lfaAt~davfrlw~e~q~wt~er  275 (445)
T KOG2139|consen  241 ---------------------------------------------FSLLKWSPDGDVLFAATCDAVFRLWQENQSWTKER  275 (445)
T ss_pred             ---------------------------------------------eeeEEEcCCCCEEEEecccceeeeehhcccceecc
Confidence                                                         1113333  36788999999999997655443333


Q ss_pred             EecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcC
Q psy14511        234 VEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRT  313 (488)
Q Consensus       234 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~  313 (488)
                      ...   ..+.|...+|+|+|+.|+.+++  |.-++|.+.-...-..+..                .++......+-|+..
T Consensus       276 w~l---gsgrvqtacWspcGsfLLf~~s--gsp~lysl~f~~~~~~~~~----------------~~~~k~~lliaDL~e  334 (445)
T KOG2139|consen  276 WIL---GSGRVQTACWSPCGSFLLFACS--GSPRLYSLTFDGEDSVFLR----------------PQSIKRVLLIADLQE  334 (445)
T ss_pred             eec---cCCceeeeeecCCCCEEEEEEc--CCceEEEEeecCCCccccC----------------cccceeeeeeccchh
Confidence            333   4458999999999999988833  3334444322111111110                112222233444432


Q ss_pred             CCccceeeecCCccEEEEEEccCCcEEEEEec
Q psy14511        314 HSDYPTAITREGDVVCGLKWSPNGRYLASGSN  345 (488)
Q Consensus       314 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d  345 (488)
                      -. ......--.+++.+++|.|.|.+||+.-.
T Consensus       335 ~t-i~ag~~l~cgeaq~lawDpsGeyLav~fK  365 (445)
T KOG2139|consen  335 VT-ICAGQRLCCGEAQCLAWDPSGEYLAVIFK  365 (445)
T ss_pred             hh-hhcCcccccCccceeeECCCCCEEEEEEc
Confidence            11 00111112356789999999999998753

>KOG2394|consensus

Probab=99.73  E-value=3e-16  Score=135.79  Aligned_cols=226  Identities=17%  Similarity=0.319  Sum_probs=162.9

Q ss_pred             CcEEEEECCCeEEEEECCCCce--E--EEEecCCCCCCceEEEEE-----cCCCCeEEEEeCCCCcEEEEECCcceeeee
Q psy14511        209 HDTLAVALDTSVYTWNTKTNKT--Q--LLVEYPTYDNAYISCVAW-----KPRTTDLAVTNTCTEYIDLWHEQEERLIQK  279 (488)
Q Consensus       209 ~~~~~~~~d~~v~iw~~~~~~~--~--~~~~~~~~~~~~i~~~~~-----~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~  279 (488)
                      +..++-.....+++|+...+..  .  ....+   .....+|-+|     .|.+-.++++ -.-|.+.+.|....+..+.
T Consensus       135 gd~lcFnvg~~lyv~~~~g~~~~~~pi~k~~y---~gt~P~cHdfn~~~a~~~g~dllIG-f~tGqvq~idp~~~~~skl  210 (636)
T KOG2394|consen  135 GDRLCFNVGRELYVYSYRGAADLSKPIDKREY---KGTSPTCHDFNSFTATPKGLDLLIG-FTTGQVQLIDPINFEVSKL  210 (636)
T ss_pred             CCEEEEecCCeEEEEEccCcchhccchhhhcc---cCCCCceecccccccCCCCcceEEe-eccCceEEecchhhHHHHh
Confidence            4556666777888888874321  1  11111   2223344444     3566677888 7888899988766322222


Q ss_pred             ec----cccccEEEEEe---cCCEEEEeecCCeEEEEECcCCC---------------------------ccceeeecCC
Q psy14511        280 LR----THMHQVIAMCW---NGNLLSCGTIGGNILHYDVRTHS---------------------------DYPTAITREG  325 (488)
Q Consensus       280 ~~----~~~~~v~~~~~---~~~~l~~~~~dg~i~i~d~~~~~---------------------------~~~~~~~~~~  325 (488)
                      +.    -.+..++++.|   +...++++-.+|.+++||.....                           .++....-..
T Consensus       211 fne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~  290 (636)
T KOG2394|consen  211 FNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWHIGE  290 (636)
T ss_pred             hhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccceeEecc
Confidence            21    13468899999   67788888999999999763210                           1122222234


Q ss_pred             ccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCccccee-----eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeE
Q psy14511        326 DVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLI-----VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIE  399 (488)
Q Consensus       326 ~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~  399 (488)
                      +.|+..+|+|||++||+.+ ||.++|||..+.+....++..     ..+|||||+++++  |++|..|.||.+...+.+.
T Consensus       291 g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvt--GGEDDLVtVwSf~erRVVA  368 (636)
T KOG2394|consen  291 GSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVT--GGEDDLVTVWSFEERRVVA  368 (636)
T ss_pred             ccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEe--cCCcceEEEEEeccceEEE
Confidence            5788999999999999999 799999999987665544433     3399999999999  9999999999999999999


Q ss_pred             EEeeccccEEEEEEcC-------------------------------C----C-------------CEEEEEeCCCcEEE
Q psy14511        400 ELKIHQERILSAVLSP-------------------------------D----Q-------------TCVAAASADETISI  431 (488)
Q Consensus       400 ~~~~~~~~v~~~~~s~-------------------------------~----~-------------~~l~t~~~dg~v~i  431 (488)
                      .-++|++.|+.++|.|                               +    +             -.+.+.+.|-.+.+
T Consensus       369 RGqGHkSWVs~VaFDpytt~~ee~~~~~~~~~~~~~~~~~~~~r~~~~~S~~~~~~s~~~~~~~v~YRfGSVGqDTqlcL  448 (636)
T KOG2394|consen  369 RGQGHKSWVSVVAFDPYTTSTEEWNNFSGMDSTFSDVAHDFEIRANGTGSAEGCPLSSFNRINSVTYRFGSVGQDTQLCL  448 (636)
T ss_pred             eccccccceeeEeecccccccccccccccccccccchhcccccccCCCCCcCCCcccccccccceEEEeecccccceEEE
Confidence            9999999999999973                               0    1             14778889999999


Q ss_pred             EecCCCCcc
Q psy14511        432 WNCFPRDKK  440 (488)
Q Consensus       432 w~~~~~~~~  440 (488)
                      ||+......
T Consensus       449 WDlteD~L~  457 (636)
T KOG2394|consen  449 WDLTEDVLV  457 (636)
T ss_pred             Eecchhhcc
Confidence            999865433

>KOG1240|consensus

Probab=99.73  E-value=1.1e-15  Score=144.89  Aligned_cols=337  Identities=15%  Similarity=0.190  Sum_probs=197.9

Q ss_pred             ceeecccCceEEEEEEccCC-cEEEEec-CCeEEEEeccccCcC----CCcccccccccceeEEEEecCCCeEEeeeCCc
Q psy14511         29 PTAITREGDVVCGLKWSPNG-RYLASGS-NNTVKIWDFRQLDAK----RPQVNNQCHLSAVKAIAWCPWEPTLLATGGGI  102 (488)
Q Consensus        29 ~~~~~~h~~~V~~l~~sp~g-~~las~~-d~~i~vwd~~~~~~~----~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~  102 (488)
                      ...+..|...|..++.++.. .++++|+ ||+|++|+.......    +...++....+.+.++.+.+.+.++++++.  
T Consensus      1041 VAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t~-- 1118 (1431)
T KOG1240|consen 1041 VAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVSTK-- 1118 (1431)
T ss_pred             eehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEEcC--
Confidence            34567888889999988765 8999999 999999998753222    222223334678999999999988777765  


Q ss_pred             ccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccc
Q psy14511        103 CDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKV  182 (488)
Q Consensus       103 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (488)
                       ||.|++.+++..........       ....++...               .+.++...                    
T Consensus      1119 -DG~v~~~~id~~~~~~~~~~-------~~ri~n~~~---------------~g~vv~m~-------------------- 1155 (1431)
T KOG1240|consen 1119 -DGSVRVLRIDHYNVSKRVAT-------QVRIPNLKK---------------DGVVVSMH-------------------- 1155 (1431)
T ss_pred             -CCeEEEEEccccccccceee-------eeecccccC---------------CCceEEee--------------------
Confidence             99999999875311000000       000000000               00000000                    


Q ss_pred             cCCCceeecCCCccccceeeeeeeC-C-CcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEe
Q psy14511        183 KAKPERILEAPSIINDFYTSGLDWG-Y-HDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTN  260 (488)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~  260 (488)
                                          ..... . ..++.+..-+.|..||+.........+.+. ..+.|++++.+|.++++++| 
T Consensus      1156 --------------------a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~-~hG~vTSi~idp~~~WlviG- 1213 (1431)
T KOG1240|consen 1156 --------------------AFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQL-RHGLVTSIVIDPWCNWLVIG- 1213 (1431)
T ss_pred             --------------------cccccccceeEEEEEeccceEEecchhhhhHHhhhcCc-cccceeEEEecCCceEEEEe-
Confidence                                00011 1 246666788999999999877666665555 67889999999999999999 


Q ss_pred             CCCCcEEEEECCcceeeeeec-cccccEEEEEe---cC--CEEEEe-e-cCCeEEEEECcCCCccceeeecC-C------
Q psy14511        261 TCTEYIDLWHEQEERLIQKLR-THMHQVIAMCW---NG--NLLSCG-T-IGGNILHYDVRTHSDYPTAITRE-G------  325 (488)
Q Consensus       261 ~~~~~i~i~d~~~~~~~~~~~-~~~~~v~~~~~---~~--~~l~~~-~-~dg~i~i~d~~~~~~~~~~~~~~-~------  325 (488)
                      +..|.+.+||++-+.++..+. .+..++..+..   .+  ...+++ . ..+.|.+|++.++.. ...+-.. .      
T Consensus      1214 ts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~~g~~-~~vl~~s~~~p~ls~ 1292 (1431)
T KOG1240|consen 1214 TSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNMETGLR-QTVLWASDGAPILSY 1292 (1431)
T ss_pred             cCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeeecccCcc-eEEEEcCCCCcchhh
Confidence            999999999999888877764 23456665555   22  444444 4 578899999988642 2222111 0      


Q ss_pred             ------------ccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCc-ccceeeeeecCC--CCEEEEEccCCCCeEEE
Q psy14511        326 ------------DVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKR-PLGLIVPKLKRE--GRELVTSHGKQDCSLKM  389 (488)
Q Consensus       326 ------------~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~-~~~~~~~~~~~~--~~~l~~~~g~~~~~i~i  389 (488)
                                  -......+..-+.++.+++ |..|+.||....+... ........++.+  ...+.+..|+.--...+
T Consensus      1293 ~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p~~ss~~~~~~s~~~~~~~~s~~~~~i~~~~~i~e~i 1372 (1431)
T KOG1240|consen 1293 ALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRPEISSYAVPGPSTSYSTNSESYDLSTIPGSQFIDEFI 1372 (1431)
T ss_pred             hcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCCcccccccccCccccccccchhccccccCCCccchhhh
Confidence                        0111122222334566666 7999999998664331 010000011110  00111110111000000


Q ss_pred             E------eCCCcceeE--------EEeeccccEEEEEEcCC-CCEEEEEeCCCcEEEEe
Q psy14511        390 W------EYPRLHLIE--------ELKIHQERILSAVLSPD-QTCVAAASADETISIWN  433 (488)
Q Consensus       390 ~------d~~~~~~~~--------~~~~~~~~v~~~~~s~~-~~~l~t~~~dg~v~iw~  433 (488)
                      -      +...+....        .-..|..+|+++++-.. ..+|++++.||.|++|.
T Consensus      1373 ~~~~tv~~t~~~~~~~~~~~~~~~ps~~H~d~Itdma~~~~~q~llvs~s~dG~IkiWk 1431 (1431)
T KOG1240|consen 1373 IYQQTVGLTEALRENQKLRPGPSDPSTYHHDPITDMATLKSEQPLLVSSSRDGVIKIWK 1431 (1431)
T ss_pred             hhhhhcCchhhcccccccccCCCCCcccccchhhhhhhhccCccEEEEecCCCeeeecC
Confidence            0      000000111        11357889999988764 45889999999999994

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.73  E-value=4.1e-15  Score=136.81  Aligned_cols=230  Identities=13%  Similarity=0.087  Sum_probs=155.5

Q ss_pred             CeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeC--CCCcEEEEECCcceeeeeeccccccEEEEEe--c
Q psy14511        218 TSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNT--CTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--N  293 (488)
Q Consensus       218 ~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~  293 (488)
                      ..|.++|...........    +...+...+|+|||+.|+....  .+..+.+|++.+++.... .........+.|  |
T Consensus       179 ~~l~~~d~dg~~~~~lt~----~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l-~~~~~~~~~~~~SPD  253 (429)
T PRK03629        179 YELRVSDYDGYNQFVVHR----SPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQV-ASFPRHNGAPAFSPD  253 (429)
T ss_pred             eeEEEEcCCCCCCEEeec----CCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEc-cCCCCCcCCeEECCC
Confidence            379999988766544433    5567899999999999987622  245789999987653322 222222334555  7


Q ss_pred             CCEEEEe-ecCC--eEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEec--Ce--EEEEECCCCCCCcccc---
Q psy14511        294 GNLLSCG-TIGG--NILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN--NT--VKIWDFRQLDAKRPLG---  363 (488)
Q Consensus       294 ~~~l~~~-~~dg--~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d--~~--i~iwd~~~~~~~~~~~---  363 (488)
                      |+.|+.. +.+|  .|++||+.++.  ...+..+...+....|+|||+.|+..++  +.  |.++|+.+++..+...   
T Consensus       254 G~~La~~~~~~g~~~I~~~d~~tg~--~~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~~lt~~~~  331 (429)
T PRK03629        254 GSKLAFALSKTGSLNLYVMDLASGQ--IRQVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQRITWEGS  331 (429)
T ss_pred             CCEEEEEEcCCCCcEEEEEECCCCC--EEEccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeEEeecCCC
Confidence            8877754 4444  58899998753  3344444456778999999999988774  44  4455666553322111   


Q ss_pred             -eeeeeecCCCCEEEEEccC-CCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCc---EEEEecCCCC
Q psy14511        364 -LIVPKLKREGRELVTSHGK-QDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADET---ISIWNCFPRD  438 (488)
Q Consensus       364 -~~~~~~~~~~~~l~~~~g~-~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~---v~iw~~~~~~  438 (488)
                       .....|+|||++++..... ....|++||+.+++.. .+... .......|+|||++|+.++.++.   +.+++++.+.
T Consensus       332 ~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~-~Lt~~-~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~~G~~  409 (429)
T PRK03629        332 QNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLTDT-FLDETPSIAPNGTMVIYSSSQGMGSVLNLVSTDGRF  409 (429)
T ss_pred             CccCEEECCCCCEEEEEEccCCCceEEEEECCCCCeE-EeCCC-CCCCCceECCCCCEEEEEEcCCCceEEEEEECCCCC
Confidence             1123899999999885321 2346889999887643 33322 23457889999999999998864   7788887666


Q ss_pred             ccccccccCCcceEEeec
Q psy14511        439 KKRKARQVGSGSSLEFAI  456 (488)
Q Consensus       439 ~~~~~~~~~~v~~~~~s~  456 (488)
                      ...+..+.+.+...+|+|
T Consensus       410 ~~~l~~~~~~~~~p~Wsp  427 (429)
T PRK03629        410 KARLPATDGQVKFPAWSP  427 (429)
T ss_pred             eEECccCCCCcCCcccCC
Confidence            666667788899999998

>KOG2111|consensus

Probab=99.73  E-value=1.6e-14  Score=117.20  Aligned_cols=175  Identities=18%  Similarity=0.326  Sum_probs=132.4

Q ss_pred             CeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECC-cceeeeeecc--ccccEEEEEe--
Q psy14511        218 TSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQ-EERLIQKLRT--HMHQVIAMCW--  292 (488)
Q Consensus       218 ~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~-~~~~~~~~~~--~~~~v~~~~~--  292 (488)
                      +.|.|||-...+++..+.    ...+|.++.+.++  .+++.  ..+.|.+|... ..+.++.+..  ......+++.  
T Consensus        75 NkviIWDD~k~~~i~el~----f~~~I~~V~l~r~--riVvv--l~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~  146 (346)
T KOG2111|consen   75 NKVIIWDDLKERCIIELS----FNSEIKAVKLRRD--RIVVV--LENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTS  146 (346)
T ss_pred             ceEEEEecccCcEEEEEE----eccceeeEEEcCC--eEEEE--ecCeEEEEEcCCChhheeeeecccCCCceEeecCCC
Confidence            579999977676666666    5668999999876  45555  57899999987 4555555543  2344666666  


Q ss_pred             cCCEEEE-eecCCeEEEEECcCCCc-cceeeecCCccEEEEEEccCCcEEEEEec-CeEEEEECCCCCCCcccceeeeee
Q psy14511        293 NGNLLSC-GTIGGNILHYDVRTHSD-YPTAITREGDVVCGLKWSPNGRYLASGSN-NTVKIWDFRQLDAKRPLGLIVPKL  369 (488)
Q Consensus       293 ~~~~l~~-~~~dg~i~i~d~~~~~~-~~~~~~~~~~~i~~~~~s~~~~~l~~~~d-~~i~iwd~~~~~~~~~~~~~~~~~  369 (488)
                      +..+|+. |-.-|.|++-|+..... ....+.+|.+.|.+++.+-+|.++|+++. |++                     
T Consensus       147 ~k~~LafPg~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTL---------------------  205 (346)
T KOG2111|consen  147 NKSLLAFPGFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTL---------------------  205 (346)
T ss_pred             CceEEEcCCCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEE---------------------
Confidence            3344444 34459999999987543 46889999999999999999999999973 442                     


Q ss_pred             cCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeec--cccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCC
Q psy14511        370 KREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIH--QERILSAVLSPDQTCVAAASADETISIWNCFPRD  438 (488)
Q Consensus       370 ~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~  438 (488)
                                       |+|||..+|+.+.+++.-  ...|.+++||||..+||++|+-|+|.|+.+....
T Consensus       206 -----------------IRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~~~  259 (346)
T KOG2111|consen  206 -----------------IRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAVSSDKGTLHIFSLRDTE  259 (346)
T ss_pred             -----------------EEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEEEcCCCeEEEEEeecCC
Confidence                             566666667777777533  4579999999999999999999999999998644

>KOG1912|consensus

Probab=99.71  E-value=5.8e-15  Score=133.61  Aligned_cols=437  Identities=16%  Similarity=0.170  Sum_probs=256.4

Q ss_pred             cc-CCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccC-----------C-cEEEEec-CCeEEEEecccc
Q psy14511          2 CW-NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPN-----------G-RYLASGS-NNTVKIWDFRQL   67 (488)
Q Consensus         2 ~~-dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~-----------g-~~las~~-d~~i~vwd~~~~   67 (488)
                      .| ++.+||.|+ ...|.|-|..+-+.+ +.+..|...|+.+.|.|-           . -+||++. .|.|.+||+..+
T Consensus        22 Dw~~~GLiAygs-hslV~VVDs~s~q~i-qsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~   99 (1062)
T KOG1912|consen   22 DWSPSGLIAYGS-HSLVSVVDSRSLQLI-QSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLA   99 (1062)
T ss_pred             ccCccceEEEec-CceEEEEehhhhhhh-hccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhh
Confidence            45 466788776 668999999887744 678899999999999872           1 2466666 899999999874


Q ss_pred             CcCCCcccccccccceeEEEEec---CCC-eEEeeeCCcccceEEEEecCCCeeeeeeecCCCcccccccccccccccee
Q psy14511         68 DAKRPQVNNQCHLSAVKAIAWCP---WEP-TLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRH  143 (488)
Q Consensus        68 ~~~~~~~~~~~h~~~v~~l~~~~---~~~-~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (488)
                      .   .+..+..|..++..++|-+   +.+ .|++..+   ..++.+|+..+|+.............+  |..++-+.+..
T Consensus       100 s---~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~---ss~lvLwntdtG~k~Wk~~ys~~iLs~--f~~DPfd~rh~  171 (1062)
T KOG1912|consen  100 S---VINWLSHSNDSVQDLCWVPARDDSRDVLLAIHG---SSTLVLWNTDTGEKFWKYDYSHEILSC--FRVDPFDSRHF  171 (1062)
T ss_pred             h---hhhhhcCCCcchhheeeeeccCcchheeEEecC---CcEEEEEEccCCceeeccccCCcceee--eeeCCCCcceE
Confidence            3   3344677889999999965   343 4445554   889999999999988776655443333  33333333333


Q ss_pred             EEEEEeeeeccccceeccccccccceeeecc-----cccccccccCCCceeecCCCcccc--ceeeeeeeCC--CcEEEE
Q psy14511        144 LSFLLHGFEIDRKKVLNQSKRTVSPTQFLRT-----LGKLPRKVKAKPERILEAPSIIND--FYTSGLDWGY--HDTLAV  214 (488)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~  214 (488)
                      ......|+-+ ..+.+...+.......+.-.     +..+.......  ...........  .+...+.+++  .+++..
T Consensus       172 ~~l~s~g~vl-~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~--ns~ts~~~sa~fity~a~faf~p~~rn~lfi  248 (1062)
T KOG1912|consen  172 CVLGSKGFVL-SCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATG--NSTTSTPASAYFITYCAQFAFSPHWRNILFI  248 (1062)
T ss_pred             EEEccCceEE-EEeccCCCCCCCCceeEEEecCccchhhhhhhhhcc--ccccCCCcchhHHHHHHhhhcChhhhceEEE
Confidence            3222222211 11111111111111111000     00000000000  00000000111  1122233443  678888


Q ss_pred             ECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCC--CeEEEEeCCCCcEEEEECCcceeeee-----ec-ccccc
Q psy14511        215 ALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRT--TDLAVTNTCTEYIDLWHEQEERLIQK-----LR-THMHQ  286 (488)
Q Consensus       215 ~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~l~~~~~~~~~i~i~d~~~~~~~~~-----~~-~~~~~  286 (488)
                      .....+.++|++-..+.....++   .+.+.-+.+-|+.  ..|++. ..+|.+.+|-.+......+     +. .-...
T Consensus       249 ~~prellv~dle~~~~l~vvpie---r~~akfv~vlP~~~rd~Lfcl-H~nG~ltirvrk~~~~~f~~~~~~l~~dl~~Q  324 (1062)
T KOG1912|consen  249 TFPRELLVFDLEYECCLAVVPIE---RGGAKFVDVLPDPRRDALFCL-HSNGRLTIRVRKEEPTEFKKPNASLSMDLGEQ  324 (1062)
T ss_pred             EeccceEEEcchhhceeEEEEec---cCCcceeEeccCCCcceEEEE-ecCCeEEEEEeeccCccccccchhhccccccc
Confidence            89999999999999988888874   3445556666655  456777 8999999996543111110     00 00111


Q ss_pred             EEEEEe--------------cCCEEEEeecCCeEEEEECcCCCccce------------------------------eee
Q psy14511        287 VIAMCW--------------NGNLLSCGTIGGNILHYDVRTHSDYPT------------------------------AIT  322 (488)
Q Consensus       287 v~~~~~--------------~~~~l~~~~~dg~i~i~d~~~~~~~~~------------------------------~~~  322 (488)
                      +.+++.              +...++.--.+|...+|.+.+++....                              ...
T Consensus       325 ~~~vr~m~~~rp~~~~~cPs~~sa~avl~s~g~~~~w~l~~~ri~~~~~s~~iel~~pf~f~~~~~~v~k~~l~~LS~dg  404 (1062)
T KOG1912|consen  325 VHVVRPMEEFRPVIGASCPSTPSALAVLYSSGDSTFWQLSNGRIHLDYRSSSIELVLPFDFNLSTKLVGKTSLISLSDDG  404 (1062)
T ss_pred             eEEEeechhcccceeecCCCChhhhhhhhhcchhHHHhhhcCCcCcccccccccccccccccCceeehhhccccchhhcC
Confidence            222221              234444445677778887775331100                              011


Q ss_pred             cCCccEEEEEEcc-----------CC-------cEEEEEec-CeEEEEECCCCCCCcccceeee-----eecCCCCEEEE
Q psy14511        323 REGDVVCGLKWSP-----------NG-------RYLASGSN-NTVKIWDFRQLDAKRPLGLIVP-----KLKREGRELVT  378 (488)
Q Consensus       323 ~~~~~i~~~~~s~-----------~~-------~~l~~~~d-~~i~iwd~~~~~~~~~~~~~~~-----~~~~~~~~l~~  378 (488)
                      +|.....+....|           .+       .++|.|.. |+|.++|+.++...+.+.....     .|-...+++-.
T Consensus       405 ~h~sGs~~~~~~p~p~~t~~~~~p~~n~~~~~~pLvAvGT~sGTV~vvdvst~~v~~~fsvht~~VkgleW~g~sslvSf  484 (1062)
T KOG1912|consen  405 SHSSGSTCVRMRPMPELTKVENDPGGNTPAGTVPLVAVGTNSGTVDVVDVSTNAVAASFSVHTSLVKGLEWLGNSSLVSF  484 (1062)
T ss_pred             CCCCCceeeecccCcccceeecCCCCCccceeeeeEEeecCCceEEEEEecchhhhhhhcccccceeeeeeccceeEEEe
Confidence            2333333333322           22       25677775 9999999998765554433322     33333333322


Q ss_pred             E-------ccCCCCeEEEEeCCCccee--EEEee-ccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccccccccCC
Q psy14511        379 S-------HGKQDCSLKMWEYPRLHLI--EELKI-HQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKARQVGS  448 (488)
Q Consensus       379 ~-------~g~~~~~i~i~d~~~~~~~--~~~~~-~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~~~~~~~  448 (488)
                      +       +|..-+.+.+-|+++|...  +.+++ ...+|..+..|..++||+..-.|.-+.+||+.+-...++....-+
T Consensus       485 sys~~n~~sg~vrN~l~vtdLrtGlsk~fR~l~~~despI~~irvS~~~~yLai~Fr~~plEiwd~kt~~~lr~mS~a~P  564 (1062)
T KOG1912|consen  485 SYSHVNSASGGVRNDLVVTDLRTGLSKRFRGLQKPDESPIRAIRVSSSGRYLAILFRREPLEIWDLKTLRMLRLMSLALP  564 (1062)
T ss_pred             eeccccccccceeeeEEEEEcccccccccccCCCCCcCcceeeeecccCceEEEEecccchHHHhhccchHHHHHhhcCC
Confidence            1       2344466888899988532  22232 356899999999999999999999999999998888877777777


Q ss_pred             -cceEEee
Q psy14511        449 -GSSLEFA  455 (488)
Q Consensus       449 -v~~~~~s  455 (488)
                       ++.++|+
T Consensus       565 ~it~leWs  572 (1062)
T KOG1912|consen  565 LITVLEWS  572 (1062)
T ss_pred             cEEEEeec
Confidence             8899998

>KOG1524|consensus

Probab=99.70  E-value=2.6e-14  Score=124.06  Aligned_cols=202  Identities=12%  Similarity=0.237  Sum_probs=142.6

Q ss_pred             EEEEecCCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccc
Q psy14511         50 YLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQAN  129 (488)
Q Consensus        50 ~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~  129 (488)
                      ++++.+||.+.+-+-.. +   .-.....|.+.+.+-.|+|||.-|+++|.   ||.|++|. ++|.....+.....   
T Consensus        78 ~~i~s~DGkf~il~k~~-r---VE~sv~AH~~A~~~gRW~~dGtgLlt~GE---DG~iKiWS-rsGMLRStl~Q~~~---  146 (737)
T KOG1524|consen   78 LLICSNDGRFVILNKSA-R---VERSISAHAAAISSGRWSPDGAGLLTAGE---DGVIKIWS-RSGMLRSTVVQNEE---  146 (737)
T ss_pred             EEEEcCCceEEEecccc-h---hhhhhhhhhhhhhhcccCCCCceeeeecC---CceEEEEe-ccchHHHHHhhcCc---
Confidence            55555699999987542 2   22235779999999999999999999998   99999998 45554333322222   


Q ss_pred             cccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCC-
Q psy14511        130 DETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGY-  208 (488)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  208 (488)
                                                                                            .+.+..|.+ 
T Consensus       147 ----------------------------------------------------------------------~v~c~~W~p~  156 (737)
T KOG1524|consen  147 ----------------------------------------------------------------------SIRCARWAPN  156 (737)
T ss_pred             ----------------------------------------------------------------------eeEEEEECCC
Confidence                                                                                  233344443 


Q ss_pred             CcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEE
Q psy14511        209 HDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVI  288 (488)
Q Consensus       209 ~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~  288 (488)
                      ..-+.-+..+.+.+=.+.....+.....   |.+-|.++.|++..+.++++ +.|-..++||.. |+.+..-..|..+|+
T Consensus       157 S~~vl~c~g~h~~IKpL~~n~k~i~WkA---HDGiiL~~~W~~~s~lI~sg-GED~kfKvWD~~-G~~Lf~S~~~ey~IT  231 (737)
T KOG1524|consen  157 SNSIVFCQGGHISIKPLAANSKIIRWRA---HDGLVLSLSWSTQSNIIASG-GEDFRFKIWDAQ-GANLFTSAAEEYAIT  231 (737)
T ss_pred             CCceEEecCCeEEEeecccccceeEEec---cCcEEEEeecCccccceeec-CCceeEEeeccc-CcccccCChhcccee
Confidence            2344555666676666655544333333   99999999999999999999 999999999965 467777778999999


Q ss_pred             EEEecCCE-EEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEec-CeEEE
Q psy14511        289 AMCWNGNL-LSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN-NTVKI  350 (488)
Q Consensus       289 ~~~~~~~~-l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d-~~i~i  350 (488)
                      +++|+... ++.++ -+.+++            -....+.|..++|||||..+++|+. |.+.+
T Consensus       232 Sva~npd~~~~v~S-~nt~R~------------~~p~~GSifnlsWS~DGTQ~a~gt~~G~v~~  282 (737)
T KOG1524|consen  232 SVAFNPEKDYLLWS-YNTARF------------SSPRVGSIFNLSWSADGTQATCGTSTGQLIV  282 (737)
T ss_pred             eeeeccccceeeee-eeeeee------------cCCCccceEEEEEcCCCceeeccccCceEEE
Confidence            99996544 44443 333431            2223456999999999999999885 66543

>KOG3881|consensus

Probab=99.70  E-value=8.6e-15  Score=122.01  Aligned_cols=211  Identities=12%  Similarity=0.120  Sum_probs=162.2

Q ss_pred             eCCCcEEEEECCCeEEEEECCCCc--eEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCC--CcEEEEECCcceeeeeec
Q psy14511        206 WGYHDTLAVALDTSVYTWNTKTNK--TQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCT--EYIDLWHEQEERLIQKLR  281 (488)
Q Consensus       206 ~~~~~~~~~~~d~~v~iw~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~--~~i~i~d~~~~~~~~~~~  281 (488)
                      ..++.++++-.+|.+.+|....+.  ......+.  ....+..+.-++...++++.|+..  ..+.+||++..+.+..-+
T Consensus       113 ~~dg~Litc~~sG~l~~~~~k~~d~hss~l~~la--~g~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aK  190 (412)
T KOG3881|consen  113 LADGTLITCVSSGNLQVRHDKSGDLHSSKLIKLA--TGPGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAK  190 (412)
T ss_pred             hcCCEEEEEecCCcEEEEeccCCccccccceeee--cCCceeeeccCCCCCceEecCchhcccceeeeecccceeeeecc
Confidence            345778888899999999998543  11112221  234567777778778887765888  889999999876655543


Q ss_pred             ccc---------ccEEEEEe--c--CCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEec-Ce
Q psy14511        282 THM---------HQVIAMCW--N--GNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN-NT  347 (488)
Q Consensus       282 ~~~---------~~v~~~~~--~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d-~~  347 (488)
                      .-.         -.++++.|  .  ...+++++.-+.+++||.+.++.++..+.-...+++++...|++++++++.- +.
T Consensus       191 NvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~  270 (412)
T KOG3881|consen  191 NVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQ  270 (412)
T ss_pred             CCCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccCcceeEeccccCcceeeeecCCCcEEEEecccch
Confidence            321         12356666  2  5889999999999999999988899999888899999999999999988864 66


Q ss_pred             EEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEE-EeeccccEEEEEEcCCCCEEEEEeCC
Q psy14511        348 VKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEE-LKIHQERILSAVLSPDQTCVAAASAD  426 (488)
Q Consensus       348 i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~t~~~d  426 (488)
                      +..||++.                                       ++.+.. +.+-.+.|+++..+|..++||+++-|
T Consensus       271 l~~FD~r~---------------------------------------~kl~g~~~kg~tGsirsih~hp~~~~las~GLD  311 (412)
T KOG3881|consen  271 LAKFDLRG---------------------------------------GKLLGCGLKGITGSIRSIHCHPTHPVLASCGLD  311 (412)
T ss_pred             hheecccC---------------------------------------ceeeccccCCccCCcceEEEcCCCceEEeeccc
Confidence            66666554                                       444443 67788899999999999999999999


Q ss_pred             CcEEEEecCCCCccccccccCCcceEEeecC
Q psy14511        427 ETISIWNCFPRDKKRKARQVGSGSSLEFAIL  457 (488)
Q Consensus       427 g~v~iw~~~~~~~~~~~~~~~~v~~~~~s~~  457 (488)
                      ..|||+|+.+.+++.........+++.+.++
T Consensus       312 RyvRIhD~ktrkll~kvYvKs~lt~il~~~~  342 (412)
T KOG3881|consen  312 RYVRIHDIKTRKLLHKVYVKSRLTFILLRDD  342 (412)
T ss_pred             eeEEEeecccchhhhhhhhhccccEEEecCC
Confidence            9999999999888876666777777777654

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=99.70  E-value=7.1e-14  Score=120.71  Aligned_cols=366  Identities=16%  Similarity=0.154  Sum_probs=229.2

Q ss_pred             CCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCcccccccccceeEEEEecCCC
Q psy14511         14 GGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEP   93 (488)
Q Consensus        14 dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~   93 (488)
                      +..|.++................-++..++|||.|++|++..-..|.+|.-....   .+..+. | ..|..+.|+|.++
T Consensus        10 s~~i~~f~~~~s~~~~~~~~~~~~p~~~~~~SP~G~~l~~~~~~~V~~~~g~~~~---~l~~~~-~-~~V~~~~fSP~~k   84 (561)
T COG5354          10 SAVISVFWNSQSEVIHTRFESENWPVAYVSESPLGTYLFSEHAAGVECWGGPSKA---KLVRFR-H-PDVKYLDFSPNEK   84 (561)
T ss_pred             cceEEEeecCccccccccccccCcchhheeecCcchheehhhccceEEccccchh---heeeee-c-CCceecccCcccc
Confidence            4455555444433344555556678999999999999999988889999976643   222222 3 5799999999999


Q ss_pred             eEEeeeCCc------------ccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecc
Q psy14511         94 TLLATGGGI------------CDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQ  161 (488)
Q Consensus        94 ~l~~~~~~~------------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (488)
                      ||.+-...+            .++.+.+||..+|..+..+.....+....                    .     +   
T Consensus        85 YL~tw~~~pi~~pe~e~sp~~~~n~~~vwd~~sg~iv~sf~~~~q~~~~W--------------------p-----~---  136 (561)
T COG5354          85 YLVTWSREPIIEPEIEISPFTSKNNVFVWDIASGMIVFSFNGISQPYLGW--------------------P-----V---  136 (561)
T ss_pred             eeeeeccCCccChhhccCCccccCceeEEeccCceeEeeccccCCccccc--------------------c-----e---
Confidence            887655421            13469999999999887776653320000                    0     0   


Q ss_pred             ccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCC-CcEEEEECCCeEEEEECCCCceEEEEecCCCC
Q psy14511        162 SKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGY-HDTLAVALDTSVYTWNTKTNKTQLLVEYPTYD  240 (488)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~  240 (488)
                                                                +.|+- +.+++--....+.++++ ++... ........
T Consensus       137 ------------------------------------------~k~s~~D~y~ARvv~~sl~i~e~-t~n~~-~~p~~~lr  172 (561)
T COG5354         137 ------------------------------------------LKFSIDDKYVARVVGSSLYIHEI-TDNIE-EHPFKNLR  172 (561)
T ss_pred             ------------------------------------------eeeeecchhhhhhccCeEEEEec-CCccc-cCchhhcc
Confidence                                                      11111 22222235667888886 33221 11111103


Q ss_pred             CCceEEEEEcCCCC--eEEEE----eCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEee-----------
Q psy14511        241 NAYISCVAWKPRTT--DLAVT----NTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGT-----------  301 (488)
Q Consensus       241 ~~~i~~~~~~~~~~--~l~~~----~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~-----------  301 (488)
                      ...+....|+|.++  .|++-    ....+.+++|.+..+..+.+-.-....-..+.|  .|++++.--           
T Consensus       173 ~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qLkW~~~g~~ll~l~~t~~ksnKsyf  252 (561)
T COG5354         173 PVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQLKWQVLGKYLLVLVMTHTKSNKSYF  252 (561)
T ss_pred             ccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeecccEEEEecCCceEEEEEEEeeeccccee
Confidence            35678888888743  34432    256788999998866655544333333445555  355444321           


Q ss_pred             cCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe---cCeEEEEECCCCCCCccccee---eeeecCCCCE
Q psy14511        302 IGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS---NNTVKIWDFRQLDAKRPLGLI---VPKLKREGRE  375 (488)
Q Consensus       302 ~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~---d~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~  375 (488)
                      ...++++++++...  +.......++|...+|.|.++.+++.+   +-.+.++|++.. ...-+...   ...|+|.+++
T Consensus       253 gesnLyl~~~~e~~--i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N-l~~~~Pe~~rNT~~fsp~~r~  329 (561)
T COG5354         253 GESNLYLLRITERS--IPVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN-LRFYFPEQKRNTIFFSPHERY  329 (561)
T ss_pred             ccceEEEEeecccc--cceeccccccceeeeecccCCceeEEecccccceeecccccc-eEEecCCcccccccccCcccE
Confidence            13568889888532  233336678999999999998888776   288899998854 11111111   2289999999


Q ss_pred             EEEE-ccCCCCeEEEEeCCCccee-EEEeeccccEEEEEEcCCCCEEEEEe------CCCcEEEEecCCCCccccccccC
Q psy14511        376 LVTS-HGKQDCSLKMWEYPRLHLI-EELKIHQERILSAVLSPDQTCVAAAS------ADETISIWNCFPRDKKRKARQVG  447 (488)
Q Consensus       376 l~~~-~g~~~~~i~i~d~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~t~~------~dg~v~iw~~~~~~~~~~~~~~~  447 (488)
                      ++++ -+...|.+.+||......+ ..+.+..  .+-+.|+||++++.+..      .|..|.|||+.....-       
T Consensus       330 il~agF~nl~gni~i~~~~~rf~~~~~~~~~n--~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g~~~f-------  400 (561)
T COG5354         330 ILFAGFDNLQGNIEIFDPAGRFKVAGAFNGLN--TSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYGAKVF-------  400 (561)
T ss_pred             EEEecCCccccceEEeccCCceEEEEEeecCC--ceEeeccCCceEEEecCCCcccccCcceEEEEecCchhh-------
Confidence            9885 1344578999998764433 3555443  35578999999987754      4788999999876543       


Q ss_pred             CcceEEeecCCCceEEEEeee
Q psy14511        448 SGSSLEFAILKQPVSLTALLR  468 (488)
Q Consensus       448 ~v~~~~~s~~~~~~~~~~~~~  468 (488)
                      ....+.|-|.++..+......
T Consensus       401 el~~~~W~p~~~~~ttsSs~~  421 (561)
T COG5354         401 ELTNITWDPSGQYVTTSSSCP  421 (561)
T ss_pred             hhhhccccCCcccceeeccCC
Confidence            344466666666665544443

>KOG2314|consensus

Probab=99.70  E-value=6.5e-14  Score=122.13  Aligned_cols=323  Identities=17%  Similarity=0.205  Sum_probs=213.2

Q ss_pred             eEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCc--------ccceEEE
Q psy14511         38 VVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGI--------CDQTVRL  109 (488)
Q Consensus        38 ~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~--------~d~~i~v  109 (488)
                      .-+-+.|||-|.||++-...-|.+|--++   ...+..+. |. .|.-+.|||..+||++-+...        ....++|
T Consensus       212 Tetyv~wSP~GTYL~t~Hk~GI~lWGG~~---f~r~~RF~-Hp-~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~I  286 (698)
T KOG2314|consen  212 TETYVRWSPKGTYLVTFHKQGIALWGGES---FDRIQRFY-HP-GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLII  286 (698)
T ss_pred             eeeeEEecCCceEEEEEeccceeeecCcc---HHHHHhcc-CC-CceeeecCCccceEEEecCCccccCcccCCCceEEE
Confidence            35679999999999999877799997443   44444333 54 589999999999998876431        1257999


Q ss_pred             EecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCcee
Q psy14511        110 WNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERI  189 (488)
Q Consensus       110 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (488)
                      ||+.+|...+.+.....+-                                                             
T Consensus       287 WDI~tG~lkrsF~~~~~~~-------------------------------------------------------------  305 (698)
T KOG2314|consen  287 WDIATGLLKRSFPVIKSPY-------------------------------------------------------------  305 (698)
T ss_pred             EEccccchhcceeccCCCc-------------------------------------------------------------
Confidence            9999999877665421100                                                             


Q ss_pred             ecCCCccccceeeeeeeCC-CcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEe----CCCC
Q psy14511        190 LEAPSIINDFYTSGLDWGY-HDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTN----TCTE  264 (488)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~----~~~~  264 (488)
                               .....+.|+- +.+++.-....|.+|+...-.+.....+   .-..|....|+|.++.||.-.    ..-.
T Consensus       306 ---------~~WP~frWS~DdKy~Arm~~~sisIyEtpsf~lld~Ksl---ki~gIr~FswsP~~~llAYwtpe~~~~pa  373 (698)
T KOG2314|consen  306 ---------LKWPIFRWSHDDKYFARMTGNSISIYETPSFMLLDKKSL---KISGIRDFSWSPTSNLLAYWTPETNNIPA  373 (698)
T ss_pred             ---------cccceEEeccCCceeEEeccceEEEEecCceeeeccccc---CCccccCcccCCCcceEEEEcccccCCcc
Confidence                     0001144543 4556655678899999877544433333   456688999999999888751    1223


Q ss_pred             cEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEee----------cCCeEEEEECcCCCccceeeecCCccEEEEE
Q psy14511        265 YIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGT----------IGGNILHYDVRTHSDYPTAITREGDVVCGLK  332 (488)
Q Consensus       265 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~----------~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~  332 (488)
                      .+.+-.+.+++.+++-.-+.-.=..+-|  +|.+|+.--          .-.++.|+.++...-++... .-...|...+
T Consensus       374 rvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~v-elke~vi~Fa  452 (698)
T KOG2314|consen  374 RVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEVV-ELKESVIAFA  452 (698)
T ss_pred             eEEEEecCccceeeeccceeeeccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCCceee-ecchheeeee
Confidence            5677777777777766555544455666  566666421          12246677777654333333 3456688999


Q ss_pred             EccCCcEEEEEe--c--CeEEEEECCC-CCCCccccee----e--eeecCCCCEEEEE-ccCCCCeEEEEeCCCcceeEE
Q psy14511        333 WSPNGRYLASGS--N--NTVKIWDFRQ-LDAKRPLGLI----V--PKLKREGRELVTS-HGKQDCSLKMWEYPRLHLIEE  400 (488)
Q Consensus       333 ~s~~~~~l~~~~--d--~~i~iwd~~~-~~~~~~~~~~----~--~~~~~~~~~l~~~-~g~~~~~i~i~d~~~~~~~~~  400 (488)
                      |-|.|..+++-+  +  .++.+|.+++ ......+..+    .  ..|+|.|++++++ -++..|.+.++|+.-..+..+
T Consensus       453 WEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~dk~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~a~~k~~  532 (698)
T KOG2314|consen  453 WEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELDKKFANTVFWSPKGRFVVVAALVSRRGDLEFYDTDYADLKDT  532 (698)
T ss_pred             eccCCCeEEEEEccccccceeEEEeecCCCchhhhhhhcccccceEEEcCCCcEEEEEEecccccceEEEecchhhhhhc
Confidence            999998877654  3  8899999884 2222222221    1  1899999998875 245689999999874333222


Q ss_pred             EeeccccEEEEEEcCCCCEEEEEeC------CCcEEEEecCCCCc
Q psy14511        401 LKIHQERILSAVLSPDQTCVAAASA------DETISIWNCFPRDK  439 (488)
Q Consensus       401 ~~~~~~~v~~~~~s~~~~~l~t~~~------dg~v~iw~~~~~~~  439 (488)
                      -.......+.+.|.|.|+|++|++.      |.--++|++.....
T Consensus       533 ~~~eh~~at~veWDPtGRYvvT~ss~wrhk~d~GYri~tfqGrll  577 (698)
T KOG2314|consen  533 ASPEHFAATEVEWDPTGRYVVTSSSSWRHKVDNGYRIFTFQGRLL  577 (698)
T ss_pred             cCccccccccceECCCCCEEEEeeehhhhccccceEEEEeecHHH
Confidence            2222234688999999999999885      44567888775443

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.70  E-value=6.8e-15  Score=136.12  Aligned_cols=230  Identities=14%  Similarity=0.135  Sum_probs=154.8

Q ss_pred             CeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCC--CCcEEEEECCcceeeeeeccccccEEEEEe--c
Q psy14511        218 TSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTC--TEYIDLWHEQEERLIQKLRTHMHQVIAMCW--N  293 (488)
Q Consensus       218 ~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~--~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~  293 (488)
                      ..|.+||........+..    +...+.+.+|+|+|+.|+.....  ...|.+||+.+++... +....+...+..|  |
T Consensus       184 ~~l~i~D~~g~~~~~lt~----~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~-l~~~~g~~~~~~~SpD  258 (433)
T PRK04922        184 YALQVADSDGYNPQTILR----SAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQREL-VASFRGINGAPSFSPD  258 (433)
T ss_pred             EEEEEECCCCCCceEeec----CCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEE-eccCCCCccCceECCC
Confidence            368899987655444433    55678899999999999987322  3469999998765433 2233333445566  7


Q ss_pred             CCEEE-EeecCC--eEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEec--Ce--EEEEECCCCCCCcccc---
Q psy14511        294 GNLLS-CGTIGG--NILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN--NT--VKIWDFRQLDAKRPLG---  363 (488)
Q Consensus       294 ~~~l~-~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d--~~--i~iwd~~~~~~~~~~~---  363 (488)
                      |+.++ +.+.+|  .|++||+.++.  ...+..+......++|+|||+.|+..++  +.  |.++|+.+++..+...   
T Consensus       259 G~~l~~~~s~~g~~~Iy~~d~~~g~--~~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~lt~~g~  336 (433)
T PRK04922        259 GRRLALTLSRDGNPEIYVMDLGSRQ--LTRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAERLTFQGN  336 (433)
T ss_pred             CCEEEEEEeCCCCceEEEEECCCCC--eEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEEeecCCC
Confidence            87665 445555  59999998753  3445555555567899999999998874  44  6666776654322111   


Q ss_pred             -eeeeeecCCCCEEEEEccCC-CCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCC---CcEEEEecCCCC
Q psy14511        364 -LIVPKLKREGRELVTSHGKQ-DCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASAD---ETISIWNCFPRD  438 (488)
Q Consensus       364 -~~~~~~~~~~~~l~~~~g~~-~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~d---g~v~iw~~~~~~  438 (488)
                       .....|+|||++++...... ...|.+||+.+++.. .+. +........|+|||++|+..+.+   +.|.++++..+.
T Consensus       337 ~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~-~Lt-~~~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~g~~  414 (433)
T PRK04922        337 YNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR-TLT-PGSLDESPSFAPNGSMVLYATREGGRGVLAAVSTDGRV  414 (433)
T ss_pred             CccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeE-ECC-CCCCCCCceECCCCCEEEEEEecCCceEEEEEECCCCc
Confidence             11238999999998864321 236999999887754 333 22245678999999998877754   468888887655


Q ss_pred             ccccccccCCcceEEeec
Q psy14511        439 KKRKARQVGSGSSLEFAI  456 (488)
Q Consensus       439 ~~~~~~~~~~v~~~~~s~  456 (488)
                      ......+.+.+..++|+|
T Consensus       415 ~~~l~~~~g~~~~p~wsp  432 (433)
T PRK04922        415 RQRLVSADGEVREPAWSP  432 (433)
T ss_pred             eEEcccCCCCCCCCccCC
Confidence            555555567788888887

>KOG1523|consensus

Probab=99.69  E-value=5e-15  Score=120.13  Aligned_cols=219  Identities=18%  Similarity=0.243  Sum_probs=171.8

Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcc---eeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCC
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEE---RLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTH  314 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~---~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~  314 (488)
                      ...+|+|.+|++|+..++++ .....|.||.....   +..+++..|...|+.++|  ..+.|++++.|..-++|....+
T Consensus         9 ~~~pitchAwn~drt~iAv~-~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~   87 (361)
T KOG1523|consen    9 LLEPITCHAWNSDRTQIAVS-PNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSG   87 (361)
T ss_pred             ccCceeeeeecCCCceEEec-cCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCC
Confidence            45689999999999999999 88899999987654   467888999999999999  5789999999999999999554


Q ss_pred             C--ccceeeecCCccEEEEEEccCCcEEEEEec-CeEEEEECCCCC-------CCcccceeee--eecCCCCEEEEEccC
Q psy14511        315 S--DYPTAITREGDVVCGLKWSPNGRYLASGSN-NTVKIWDFRQLD-------AKRPLGLIVP--KLKREGRELVTSHGK  382 (488)
Q Consensus       315 ~--~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d-~~i~iwd~~~~~-------~~~~~~~~~~--~~~~~~~~l~~~~g~  382 (488)
                      .  .+...+..++...+++.|+|.++.+|+++. ..|.||-++..+       ..++++..+.  .|+|++-+|++  |+
T Consensus        88 ~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaa--Gs  165 (361)
T KOG1523|consen   88 GTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAA--GS  165 (361)
T ss_pred             CeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceecc--cc
Confidence            4  355567778888999999999999999996 888888876543       2233333333  89999999999  99


Q ss_pred             CCCeEEEEeC-----CC-------------cceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcc--cc
Q psy14511        383 QDCSLKMWEY-----PR-------------LHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKK--RK  442 (488)
Q Consensus       383 ~~~~i~i~d~-----~~-------------~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~--~~  442 (488)
                      .|+..++|..     +.             |+++.++....+.|..+.|+|+|..|+-.+.|+.+.+-|...+.+.  ..
T Consensus       166 ~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~~~v~~~  245 (361)
T KOG1523|consen  166 TDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPSERVQSV  245 (361)
T ss_pred             cCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCCceEEeecCCCchhccch
Confidence            9999999864     11             2344455455678999999999999999999999999998877533  22


Q ss_pred             ccccCCcceEEeecCCCce
Q psy14511        443 ARQVGSGSSLEFAILKQPV  461 (488)
Q Consensus       443 ~~~~~~v~~~~~s~~~~~~  461 (488)
                      ....-+..++.|--+...+
T Consensus       246 ~~~~lP~ls~~~ise~~vv  264 (361)
T KOG1523|consen  246 ATAQLPLLSVSWISENSVV  264 (361)
T ss_pred             hhccCCceeeEeecCCcee
Confidence            2333566666665544433

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.69  E-value=3e-14  Score=131.18  Aligned_cols=235  Identities=13%  Similarity=0.112  Sum_probs=147.5

Q ss_pred             eEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec----CCeEEEEeccccCcCCCcccccccccceeEEEEecC
Q psy14511         16 NILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS----NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPW   91 (488)
Q Consensus        16 ~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~----d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~   91 (488)
                      .|.+||......  +.+..+...+...+|||||+.||..+    +..|.+|++.+++. +.+..+.++   +..+.|+||
T Consensus       180 ~l~~~d~dg~~~--~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~-~~l~~~~~~---~~~~~~SPD  253 (429)
T PRK03629        180 ELRVSDYDGYNQ--FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV-RQVASFPRH---NGAPAFSPD  253 (429)
T ss_pred             eEEEEcCCCCCC--EEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCe-EEccCCCCC---cCCeEECCC
Confidence            688898876542  34556777899999999999998764    46899999987543 233333333   456899999


Q ss_pred             CCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceee
Q psy14511         92 EPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQF  171 (488)
Q Consensus        92 ~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (488)
                      |+.|+.+.....+..|.+||+.+++........ ...                                           
T Consensus       254 G~~La~~~~~~g~~~I~~~d~~tg~~~~lt~~~-~~~-------------------------------------------  289 (429)
T PRK03629        254 GSKLAFALSKTGSLNLYVMDLASGQIRQVTDGR-SNN-------------------------------------------  289 (429)
T ss_pred             CCEEEEEEcCCCCcEEEEEECCCCCEEEccCCC-CCc-------------------------------------------
Confidence            998887654311336888999877543222111 000                                           


Q ss_pred             ecccccccccccCCCceeecCCCccccceeeeeeeCC--CcEEEEEC-CC--eEEEEECCCCceEEEEecCCCCCCceEE
Q psy14511        172 LRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGY--HDTLAVAL-DT--SVYTWNTKTNKTQLLVEYPTYDNAYISC  246 (488)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-d~--~v~iw~~~~~~~~~~~~~~~~~~~~i~~  246 (488)
                                                    ....|++  ..++..+. ++  .|+++++.+++..... .   .......
T Consensus       290 ------------------------------~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~~lt-~---~~~~~~~  335 (429)
T PRK03629        290 ------------------------------TEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQRIT-W---EGSQNQD  335 (429)
T ss_pred             ------------------------------CceEECCCCCEEEEEeCCCCCceEEEEECCCCCeEEee-c---CCCCccC
Confidence                                          1123332  23444443 23  5666677777654432 2   2334567


Q ss_pred             EEEcCCCCeEEEEeCCC--CcEEEEECCcceeeeeeccccccEEEEEecCCEEEEeecCCe---EEEEECcCCCccceee
Q psy14511        247 VAWKPRTTDLAVTNTCT--EYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGN---ILHYDVRTHSDYPTAI  321 (488)
Q Consensus       247 ~~~~~~~~~l~~~~~~~--~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~---i~i~d~~~~~~~~~~~  321 (488)
                      ..|+|+|++++..+..+  ..|.+||+.+++.......+...-..++.||+.|+..+.++.   ++++++..  .....+
T Consensus       336 ~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~~Lt~~~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~~G--~~~~~l  413 (429)
T PRK03629        336 ADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLTDTFLDETPSIAPNGTMVIYSSSQGMGSVLNLVSTDG--RFKARL  413 (429)
T ss_pred             EEECCCCCEEEEEEccCCCceEEEEECCCCCeEEeCCCCCCCCceECCCCCEEEEEEcCCCceEEEEEECCC--CCeEEC
Confidence            89999999998873433  358888988765432222221222233448999998887764   66777753  345566


Q ss_pred             ecCCccEEEEEEccC
Q psy14511        322 TREGDVVCGLKWSPN  336 (488)
Q Consensus       322 ~~~~~~i~~~~~s~~  336 (488)
                      ..|...+...+|+|-
T Consensus       414 ~~~~~~~~~p~Wsp~  428 (429)
T PRK03629        414 PATDGQVKFPAWSPY  428 (429)
T ss_pred             ccCCCCcCCcccCCC
Confidence            677778888999873

>KOG0771|consensus

Probab=99.69  E-value=8.7e-16  Score=129.22  Aligned_cols=187  Identities=16%  Similarity=0.223  Sum_probs=147.8

Q ss_pred             EEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeee
Q psy14511        245 SCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAIT  322 (488)
Q Consensus       245 ~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~  322 (488)
                      .+++|+++|..++++ +.||++|+|+......+.....|...|.++.|  |+++|++-+.| ..+||+.+++. .+....
T Consensus       148 k~vaf~~~gs~latg-g~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~-~~a~~t  224 (398)
T KOG0771|consen  148 KVVAFNGDGSKLATG-GTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGA-ALARKT  224 (398)
T ss_pred             eEEEEcCCCCEeeec-cccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCc-hhhhcC
Confidence            789999999999999 99999999998887888888899999999999  89999999999 89999999873 333322


Q ss_pred             --cCCccEEEEEEccCC---cEEEEE--ec-CeEEEEECCCCCCC------ccccee---e-eeecCCCCEEEEEccCCC
Q psy14511        323 --REGDVVCGLKWSPNG---RYLASG--SN-NTVKIWDFRQLDAK------RPLGLI---V-PKLKREGRELVTSHGKQD  384 (488)
Q Consensus       323 --~~~~~i~~~~~s~~~---~~l~~~--~d-~~i~iwd~~~~~~~------~~~~~~---~-~~~~~~~~~l~~~~g~~~  384 (488)
                        ..+.....+.|+.|+   .+.+.+  .. +.++.||+......      +.+...   . -+.+++|++++.  |+.+
T Consensus       225 ~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~Al--GT~d  302 (398)
T KOG0771|consen  225 PFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLAL--GTMD  302 (398)
T ss_pred             CcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEE--eccC
Confidence              223345667788776   332222  24 77888776543321      111111   1 288999999999  8999


Q ss_pred             CeEEEEeCCCcceeEEE-eeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCC
Q psy14511        385 CSLKMWEYPRLHLIEEL-KIHQERILSAVLSPDQTCVAAASADETISIWNCFP  436 (488)
Q Consensus       385 ~~i~i~d~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~  436 (488)
                      |.|-|++..+.+.++-. +.|...|+.+.|+||.+++++.+.|....+..+.-
T Consensus       303 GsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~v  355 (398)
T KOG0771|consen  303 GSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLAV  355 (398)
T ss_pred             CcEEEEEeceeeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEee
Confidence            99999999998877654 57899999999999999999999999999988765

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.69  E-value=7.5e-15  Score=135.30  Aligned_cols=233  Identities=17%  Similarity=0.174  Sum_probs=149.5

Q ss_pred             CeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCC--CcEEEEECCcceeeeeeccccccEEEEEe--c
Q psy14511        218 TSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCT--EYIDLWHEQEERLIQKLRTHMHQVIAMCW--N  293 (488)
Q Consensus       218 ~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~--~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~  293 (488)
                      ..|.++|...........    +...+.+.+|+|||+.|+.....+  ..|.+||+.+++... +....+...+..|  |
T Consensus       176 ~~L~~~D~dG~~~~~l~~----~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~-l~~~~g~~~~~~~SPD  250 (427)
T PRK02889        176 YQLQISDADGQNAQSALS----SPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRV-VANFKGSNSAPAWSPD  250 (427)
T ss_pred             cEEEEECCCCCCceEecc----CCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEE-eecCCCCccceEECCC
Confidence            467788875544333332    566788999999999998873333  459999998876543 3333344456666  7


Q ss_pred             CCEEE-EeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEec--CeEEEEEC--CCCCCCccc-c---e
Q psy14511        294 GNLLS-CGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN--NTVKIWDF--RQLDAKRPL-G---L  364 (488)
Q Consensus       294 ~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d--~~i~iwd~--~~~~~~~~~-~---~  364 (488)
                      |+.|+ +.+.+|...+|.+.........+..+........|+|||+.|+..++  +...+|.+  ..+...+.. .   .
T Consensus       251 G~~la~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~lt~~g~~~  330 (427)
T PRK02889        251 GRTLAVALSRDGNSQIYTVNADGSGLRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQRVTFTGSYN  330 (427)
T ss_pred             CCEEEEEEccCCCceEEEEECCCCCcEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEEEecCCCCc
Confidence            87776 56777776666543322234555555555667899999999987774  66666655  333221111 1   1


Q ss_pred             eeeeecCCCCEEEEEccC-CCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCC---cEEEEecCCCCcc
Q psy14511        365 IVPKLKREGRELVTSHGK-QDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADE---TISIWNCFPRDKK  440 (488)
Q Consensus       365 ~~~~~~~~~~~l~~~~g~-~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg---~v~iw~~~~~~~~  440 (488)
                      ....|+|||++++..+.. ....|++||+.+++... +..+ .......|+|||+.|+.++.++   .+.+.++......
T Consensus       331 ~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~~-lt~~-~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~~g~~~~  408 (427)
T PRK02889        331 TSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVTA-LTDT-TRDESPSFAPNGRYILYATQQGGRSVLAAVSSDGRIKQ  408 (427)
T ss_pred             CceEECCCCCEEEEEEccCCcEEEEEEECCCCCeEE-ccCC-CCccCceECCCCCEEEEEEecCCCEEEEEEECCCCceE
Confidence            124899999999875321 12369999998877543 3322 2346789999999998887654   3556666433333


Q ss_pred             ccccccCCcceEEeecC
Q psy14511        441 RKARQVGSGSSLEFAIL  457 (488)
Q Consensus       441 ~~~~~~~~v~~~~~s~~  457 (488)
                      ....+.+.+...+|+|-
T Consensus       409 ~l~~~~g~~~~p~wsp~  425 (427)
T PRK02889        409 RLSVQGGDVREPSWGPF  425 (427)
T ss_pred             EeecCCCCCCCCccCCC
Confidence            44456678888999983

>KOG1272|consensus

Probab=99.69  E-value=8.4e-17  Score=136.68  Aligned_cols=255  Identities=16%  Similarity=0.196  Sum_probs=190.6

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCcccccccccce
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAV   83 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~~v   83 (488)
                      ||+.|+.|+..|.|..+|..++.....+  .-...|.++.|-.+.+++|++....++|||-. |.+..++..   | ..|
T Consensus       140 nGrhlllgGrKGHlAa~Dw~t~~L~~Ei--~v~Etv~Dv~~LHneq~~AVAQK~y~yvYD~~-GtElHClk~---~-~~v  212 (545)
T KOG1272|consen  140 NGRHLLLGGRKGHLAAFDWVTKKLHFEI--NVMETVRDVTFLHNEQFFAVAQKKYVYVYDNN-GTELHCLKR---H-IRV  212 (545)
T ss_pred             CccEEEecCCccceeeeecccceeeeee--ehhhhhhhhhhhcchHHHHhhhhceEEEecCC-CcEEeehhh---c-Cch
Confidence            8999999999999999999998743222  23456999999999999999999999999966 333444332   3 679


Q ss_pred             eEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecccc
Q psy14511         84 KAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSK  163 (488)
Q Consensus        84 ~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (488)
                      ..+.|.|.. +|+++++.  .|.++.-|+.+|+.+..+.........+..+|.                           
T Consensus       213 ~rLeFLPyH-fLL~~~~~--~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~---------------------------  262 (545)
T KOG1272|consen  213 ARLEFLPYH-FLLVAASE--AGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPY---------------------------  262 (545)
T ss_pred             hhhcccchh-heeeeccc--CCceEEEeechhhhhHHHHccCCccchhhcCCc---------------------------
Confidence            999999976 77777764  899999999999988877766443333332221                           


Q ss_pred             ccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEE-EEECCCeEEEEECCCCceEEEEecCCCCCC
Q psy14511        164 RTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTL-AVALDTSVYTWNTKTNKTQLLVEYPTYDNA  242 (488)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~  242 (488)
                                                                   +.++ ++...|+|.+|.....++...+..   |.+
T Consensus       263 ---------------------------------------------NaVih~GhsnGtVSlWSP~skePLvKiLc---H~g  294 (545)
T KOG1272|consen  263 ---------------------------------------------NAVIHLGHSNGTVSLWSPNSKEPLVKILC---HRG  294 (545)
T ss_pred             ---------------------------------------------cceEEEcCCCceEEecCCCCcchHHHHHh---cCC
Confidence                                                         2233 444899999999988775443333   999


Q ss_pred             ceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCC-C-cccee
Q psy14511        243 YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTH-S-DYPTA  320 (488)
Q Consensus       243 ~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~-~-~~~~~  320 (488)
                      +|.++++.++|++++++ +.|..++|||++....+.++.. ..+...++++.+-+++.+....+.+|.=.-. . .....
T Consensus       295 ~V~siAv~~~G~YMaTt-G~Dr~~kIWDlR~~~ql~t~~t-p~~a~~ls~SqkglLA~~~G~~v~iw~d~~~~s~~~~~p  372 (545)
T KOG1272|consen  295 PVSSIAVDRGGRYMATT-GLDRKVKIWDLRNFYQLHTYRT-PHPASNLSLSQKGLLALSYGDHVQIWKDALKGSGHGETP  372 (545)
T ss_pred             CcceEEECCCCcEEeec-ccccceeEeeeccccccceeec-CCCccccccccccceeeecCCeeeeehhhhcCCCCCCcc
Confidence            99999999999999999 9999999999998777666655 4566778887777777788888999953221 1 11111


Q ss_pred             e--ecCCccEEEEEEccCCcEEEEEec
Q psy14511        321 I--TREGDVVCGLKWSPNGRYLASGSN  345 (488)
Q Consensus       321 ~--~~~~~~i~~~~~s~~~~~l~~~~d  345 (488)
                      .  .....+|..+.|.|-...|-.|..
T Consensus       373 Ym~H~~~~~V~~l~FcP~EDvLGIGH~  399 (545)
T KOG1272|consen  373 YMNHRCGGPVEDLRFCPYEDVLGIGHA  399 (545)
T ss_pred             hhhhccCcccccceeccHHHeeecccc
Confidence            1  222357999999998888777764

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.68  E-value=2.5e-14  Score=132.56  Aligned_cols=229  Identities=11%  Similarity=0.136  Sum_probs=155.8

Q ss_pred             CeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeC--CCCcEEEEECCcceeeeeeccccccEEEEEe--c
Q psy14511        218 TSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNT--CTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--N  293 (488)
Q Consensus       218 ~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~  293 (488)
                      ..|+++|...........    +...+.+.+|+|||+.|+....  .+..|.+||+.+++.. .+..+.+.+....|  |
T Consensus       182 ~~l~~~d~dg~~~~~lt~----~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~~g~~~~~~~SPD  256 (435)
T PRK05137        182 KRLAIMDQDGANVRYLTD----GSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE-LVGNFPGMTFAPRFSPD  256 (435)
T ss_pred             eEEEEECCCCCCcEEEec----CCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE-EeecCCCcccCcEECCC
Confidence            478899987665544333    6678999999999999988732  2468999999887543 34445556666667  7


Q ss_pred             CCEEE-EeecCCe--EEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEec--C--eEEEEECCCCCCCcccc---
Q psy14511        294 GNLLS-CGTIGGN--ILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN--N--TVKIWDFRQLDAKRPLG---  363 (488)
Q Consensus       294 ~~~l~-~~~~dg~--i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d--~--~i~iwd~~~~~~~~~~~---  363 (488)
                      |+.|+ +.+.++.  |++||+.++.  ...+..+........|+|||+.|+..++  +  .|+++|+..++..+...   
T Consensus       257 G~~la~~~~~~g~~~Iy~~d~~~~~--~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~~lt~~~~  334 (435)
T PRK05137        257 GRKVVMSLSQGGNTDIYTMDLRSGT--TTRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPRRISFGGG  334 (435)
T ss_pred             CCEEEEEEecCCCceEEEEECCCCc--eEEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeEEeecCCC
Confidence            87765 5555554  7777887643  3455556655677999999999998774  3  68888887654332211   


Q ss_pred             -eeeeeecCCCCEEEEEccC-CCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCC------CcEEEEecC
Q psy14511        364 -LIVPKLKREGRELVTSHGK-QDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASAD------ETISIWNCF  435 (488)
Q Consensus       364 -~~~~~~~~~~~~l~~~~g~-~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~d------g~v~iw~~~  435 (488)
                       .....|+|||+.++..... .+..|.+||+.++.. ..+. ....+..+.|+|||+.|+..+.+      ..++++|+.
T Consensus       335 ~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~-~~lt-~~~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~  412 (435)
T PRK05137        335 RYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSGE-RILT-SGFLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLT  412 (435)
T ss_pred             cccCeEECCCCCEEEEEEcCCCceEEEEEECCCCce-Eecc-CCCCCCCCeECCCCCEEEEEEccCCCCCcceEEEEECC
Confidence             1123899999999885322 224688899865543 3333 22356789999999998876543      258888887


Q ss_pred             CCCccccccccCCcceEEeec
Q psy14511        436 PRDKKRKARQVGSGSSLEFAI  456 (488)
Q Consensus       436 ~~~~~~~~~~~~~v~~~~~s~  456 (488)
                      .+...... ..+.+...+|+|
T Consensus       413 g~~~~~l~-~~~~~~~p~Wsp  432 (435)
T PRK05137        413 GRNEREVP-TPGDASDPAWSP  432 (435)
T ss_pred             CCceEEcc-CCCCccCcccCC
Confidence            76655433 455678888887

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.68  E-value=1.2e-14  Score=133.87  Aligned_cols=203  Identities=17%  Similarity=0.180  Sum_probs=125.0

Q ss_pred             CeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec----CCeEEEEeccccCcCCCcccccccccceeEEEEec
Q psy14511         15 GNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS----NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCP   90 (488)
Q Consensus        15 g~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~----d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~   90 (488)
                      ..|.++|.....  .+.+..+...+.+.+|||||+.|+..+    ...|.+||+.+++.. .+.   ...+.+....|+|
T Consensus       176 ~~L~~~D~dG~~--~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~-~l~---~~~g~~~~~~~SP  249 (427)
T PRK02889        176 YQLQISDADGQN--AQSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRR-VVA---NFKGSNSAPAWSP  249 (427)
T ss_pred             cEEEEECCCCCC--ceEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEE-Eee---cCCCCccceEECC
Confidence            356677764332  344567778899999999999999876    246999999876532 222   2334566889999


Q ss_pred             CCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecccccccccee
Q psy14511         91 WEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQ  170 (488)
Q Consensus        91 ~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (488)
                      ||+.++.+...  ++...+|.++..                                                       
T Consensus       250 DG~~la~~~~~--~g~~~Iy~~d~~-------------------------------------------------------  272 (427)
T PRK02889        250 DGRTLAVALSR--DGNSQIYTVNAD-------------------------------------------------------  272 (427)
T ss_pred             CCCEEEEEEcc--CCCceEEEEECC-------------------------------------------------------
Confidence            99988766553  666666654211                                                       


Q ss_pred             eecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEc
Q psy14511        171 FLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWK  250 (488)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~  250 (488)
                                                                              ++....+..    +........|+
T Consensus       273 --------------------------------------------------------~~~~~~lt~----~~~~~~~~~wS  292 (427)
T PRK02889        273 --------------------------------------------------------GSGLRRLTQ----SSGIDTEPFFS  292 (427)
T ss_pred             --------------------------------------------------------CCCcEECCC----CCCCCcCeEEc
Confidence                                                                    011000000    22234456899


Q ss_pred             CCCCeEEEEeCCCCcEEEEEC--CcceeeeeeccccccEEEEEe--cCCEEEEeecCC---eEEEEECcCCCccceeeec
Q psy14511        251 PRTTDLAVTNTCTEYIDLWHE--QEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGG---NILHYDVRTHSDYPTAITR  323 (488)
Q Consensus       251 ~~~~~l~~~~~~~~~i~i~d~--~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~  323 (488)
                      |||+.++..+..++...+|.+  .+++. ..+...........|  +|+.++..+.++   .|++||+.++..  ..+..
T Consensus       293 pDG~~l~f~s~~~g~~~Iy~~~~~~g~~-~~lt~~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~--~~lt~  369 (427)
T PRK02889        293 PDGRSIYFTSDRGGAPQIYRMPASGGAA-QRVTFTGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQV--TALTD  369 (427)
T ss_pred             CCCCEEEEEecCCCCcEEEEEECCCCce-EEEecCCCCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCe--EEccC
Confidence            999998877455566667754  44332 222211222223344  899988776554   699999987542  22222


Q ss_pred             CCccEEEEEEccCCcEEEEEe
Q psy14511        324 EGDVVCGLKWSPNGRYLASGS  344 (488)
Q Consensus       324 ~~~~i~~~~~s~~~~~l~~~~  344 (488)
                      . .......|+|||++|+..+
T Consensus       370 ~-~~~~~p~~spdg~~l~~~~  389 (427)
T PRK02889        370 T-TRDESPSFAPNGRYILYAT  389 (427)
T ss_pred             C-CCccCceECCCCCEEEEEE
Confidence            2 2245678999999888776

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.67  E-value=1.7e-14  Score=133.42  Aligned_cols=203  Identities=16%  Similarity=0.126  Sum_probs=127.5

Q ss_pred             CeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec----CCeEEEEeccccCcCCCcccccccccceeEEEEec
Q psy14511         15 GNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS----NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCP   90 (488)
Q Consensus        15 g~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~----d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~   90 (488)
                      ..|.+||..... . +.+..|...+.+++|+|||+.|+..+    +..|.+||+.+++.. .+.   .+.+...+..|+|
T Consensus       184 ~~l~i~D~~g~~-~-~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~-~l~---~~~g~~~~~~~Sp  257 (433)
T PRK04922        184 YALQVADSDGYN-P-QTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRE-LVA---SFRGINGAPSFSP  257 (433)
T ss_pred             EEEEEECCCCCC-c-eEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEE-Eec---cCCCCccCceECC
Confidence            368899986543 2 44667777899999999999999876    357999999875432 222   2334455789999


Q ss_pred             CCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecccccccccee
Q psy14511         91 WEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQ  170 (488)
Q Consensus        91 ~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (488)
                      ||+.++.+.+...+..|.+||+.+++.                                                     
T Consensus       258 DG~~l~~~~s~~g~~~Iy~~d~~~g~~-----------------------------------------------------  284 (433)
T PRK04922        258 DGRRLALTLSRDGNPEIYVMDLGSRQL-----------------------------------------------------  284 (433)
T ss_pred             CCCEEEEEEeCCCCceEEEEECCCCCe-----------------------------------------------------
Confidence            999887655421123466666654431                                                     


Q ss_pred             eecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEc
Q psy14511        171 FLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWK  250 (488)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~  250 (488)
                                                                                  .....    +.......+|+
T Consensus       285 ------------------------------------------------------------~~lt~----~~~~~~~~~~s  300 (433)
T PRK04922        285 ------------------------------------------------------------TRLTN----HFGIDTEPTWA  300 (433)
T ss_pred             ------------------------------------------------------------EECcc----CCCCccceEEC
Confidence                                                                        11111    22234567899


Q ss_pred             CCCCeEEEEeCCCCc--EEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCC---eEEEEECcCCCccceeeec
Q psy14511        251 PRTTDLAVTNTCTEY--IDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGG---NILHYDVRTHSDYPTAITR  323 (488)
Q Consensus       251 ~~~~~l~~~~~~~~~--i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~  323 (488)
                      |+|+.++.++..+|.  |.++++.+++.. .+..+.......+|  +|+.++..+.++   .|.+||+.++. . ..+..
T Consensus       301 pDG~~l~f~sd~~g~~~iy~~dl~~g~~~-~lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~-~-~~Lt~  377 (433)
T PRK04922        301 PDGKSIYFTSDRGGRPQIYRVAASGGSAE-RLTFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGS-V-RTLTP  377 (433)
T ss_pred             CCCCEEEEEECCCCCceEEEEECCCCCeE-EeecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECCCCC-e-EECCC
Confidence            999999887445555  666676665432 22222222334455  788888765443   68999987654 2 23322


Q ss_pred             CCccEEEEEEccCCcEEEEEe
Q psy14511        324 EGDVVCGLKWSPNGRYLASGS  344 (488)
Q Consensus       324 ~~~~i~~~~~s~~~~~l~~~~  344 (488)
                       ........|+|||++++..+
T Consensus       378 -~~~~~~p~~spdG~~i~~~s  397 (433)
T PRK04922        378 -GSLDESPSFAPNGSMVLYAT  397 (433)
T ss_pred             -CCCCCCceECCCCCEEEEEE
Confidence             22344678999998887665

>KOG1523|consensus

Probab=99.65  E-value=9.2e-14  Score=112.92  Aligned_cols=234  Identities=13%  Similarity=0.198  Sum_probs=168.0

Q ss_pred             cCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEec-
Q psy14511         35 EGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNS-  112 (488)
Q Consensus        35 h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~-  112 (488)
                      -..+|+|.+|++|+..+|.+- +..|.||.....+......++..|...|+.++|+|..+.|++++.   |..-++|.. 
T Consensus         9 ~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~---drnayVw~~~   85 (361)
T KOG1523|consen    9 LLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSH---DRNAYVWTQP   85 (361)
T ss_pred             ccCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccC---CCCccccccC
Confidence            346899999999999999997 789999999877767888899999999999999999998888887   999999998 


Q ss_pred             CCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecC
Q psy14511        113 MNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEA  192 (488)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (488)
                      ..++-..++...                                   .+                               
T Consensus        86 ~~~~WkptlvLl-----------------------------------Ri-------------------------------   99 (361)
T KOG1523|consen   86 SGGTWKPTLVLL-----------------------------------RI-------------------------------   99 (361)
T ss_pred             CCCeeccceeEE-----------------------------------Ee-------------------------------
Confidence            444432222111                                   00                               


Q ss_pred             CCccccceeeeeeeCC--CcEEEEECCCeEEEEECCCCceE---EEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEE
Q psy14511        193 PSIINDFYTSGLDWGY--HDTLAVALDTSVYTWNTKTNKTQ---LLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYID  267 (488)
Q Consensus       193 ~~~~~~~~~~~~~~~~--~~~~~~~~d~~v~iw~~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~  267 (488)
                           .-...++.|++  +.+++++....|.+|-.+...--   +.+..  +....|+++.|+|++-.+++| +.|+..+
T Consensus       100 -----NrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikk--PirStv~sldWhpnnVLlaaG-s~D~k~r  171 (361)
T KOG1523|consen  100 -----NRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKK--PIRSTVTSLDWHPNNVLLAAG-STDGKCR  171 (361)
T ss_pred             -----ccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCC--ccccceeeeeccCCcceeccc-ccCccee
Confidence                 01123355554  56777788888888877654421   11111  167789999999999888888 9999999


Q ss_pred             EEECC-----c-------------ceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCcc
Q psy14511        268 LWHEQ-----E-------------ERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDV  327 (488)
Q Consensus       268 i~d~~-----~-------------~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~  327 (488)
                      +|..-     .             ++.+..+....+.+..+.|  +|..|+-.+.|..+.+-|...+.+.........-+
T Consensus       172 VfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~~~v~~~~~~~lP  251 (361)
T KOG1523|consen  172 VFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPSERVQSVATAQLP  251 (361)
T ss_pred             EEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCCceEEeecCCCchhccchhhccCC
Confidence            98631     1             1222333345667888888  59999999999999999988765444444444466


Q ss_pred             EEEEEEccCCcEEEEEec
Q psy14511        328 VCGLKWSPNGRYLASGSN  345 (488)
Q Consensus       328 i~~~~~s~~~~~l~~~~d  345 (488)
                      ..++.|-.+...++.+-|
T Consensus       252 ~ls~~~ise~~vv~ag~~  269 (361)
T KOG1523|consen  252 LLSVSWISENSVVAAGYD  269 (361)
T ss_pred             ceeeEeecCCceeecCCC
Confidence            777777655554444434

>KOG3881|consensus

Probab=99.64  E-value=3.8e-14  Score=118.24  Aligned_cols=211  Identities=16%  Similarity=0.274  Sum_probs=155.2

Q ss_pred             ccCceEEEEEEccCCcEEEEecCCeEEEEeccccCcC-CCcccccccccceeEEEEecCCCeEEeeeCCccc--ceEEEE
Q psy14511         34 REGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAK-RPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICD--QTVRLW  110 (488)
Q Consensus        34 ~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~-~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d--~~i~vw  110 (488)
                      ...++|..++.. ||.++.+.++|.+.+|..+.+... .++..+..+ .++..|.-++..++++++|+.  .  ..+.+|
T Consensus       103 l~~~~I~gl~~~-dg~Litc~~sG~l~~~~~k~~d~hss~l~~la~g-~g~~~~r~~~~~p~Iva~GGk--e~~n~lkiw  178 (412)
T KOG3881|consen  103 LGTKSIKGLKLA-DGTLITCVSSGNLQVRHDKSGDLHSSKLIKLATG-PGLYDVRQTDTDPYIVATGGK--ENINELKIW  178 (412)
T ss_pred             cccccccchhhc-CCEEEEEecCCcEEEEeccCCccccccceeeecC-CceeeeccCCCCCceEecCch--hcccceeee
Confidence            344556666554 566666667999999999854411 122223333 567788888888999998874  6  789999


Q ss_pred             ecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceee
Q psy14511        111 NSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERIL  190 (488)
Q Consensus       111 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (488)
                      |+++.+.+..-+....                                                                
T Consensus       179 dle~~~qiw~aKNvpn----------------------------------------------------------------  194 (412)
T KOG3881|consen  179 DLEQSKQIWSAKNVPN----------------------------------------------------------------  194 (412)
T ss_pred             ecccceeeeeccCCCC----------------------------------------------------------------
Confidence            9988754433221100                                                                


Q ss_pred             cCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCC--CCeEEEEeCCCCcEEE
Q psy14511        191 EAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPR--TTDLAVTNTCTEYIDL  268 (488)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~~~~~i~i  268 (488)
                                        +.     .+=.|                    .-.++++.|-+.  ...++++ +.-+.+++
T Consensus       195 ------------------D~-----L~LrV--------------------PvW~tdi~Fl~g~~~~~fat~-T~~hqvR~  230 (412)
T KOG3881|consen  195 ------------------DR-----LGLRV--------------------PVWITDIRFLEGSPNYKFATI-TRYHQVRL  230 (412)
T ss_pred             ------------------cc-----cccee--------------------eeeeccceecCCCCCceEEEE-ecceeEEE
Confidence                              00     01112                    224566777776  6788888 99999999


Q ss_pred             EECCcc-eeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-
Q psy14511        269 WHEQEE-RLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-  344 (488)
Q Consensus       269 ~d~~~~-~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-  344 (488)
                      ||.+.+ +++..+.-...+++++..  +++++++|...|.+..+|++.+......+.+..+.|.++..+|.++++|+++ 
T Consensus       231 YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~las~GL  310 (412)
T KOG3881|consen  231 YDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLASCGL  310 (412)
T ss_pred             ecCcccCcceeEeccccCcceeeeecCCCcEEEEecccchhheecccCceeeccccCCccCCcceEEEcCCCceEEeecc
Confidence            999875 566777666777777776  7999999999999999999998777777889999999999999999999999 


Q ss_pred             cCeEEEEECCCC
Q psy14511        345 NNTVKIWDFRQL  356 (488)
Q Consensus       345 d~~i~iwd~~~~  356 (488)
                      |..+||+|+++.
T Consensus       311 DRyvRIhD~ktr  322 (412)
T KOG3881|consen  311 DRYVRIHDIKTR  322 (412)
T ss_pred             ceeEEEeecccc
Confidence            899999999874

>KOG1272|consensus

Probab=99.63  E-value=9.8e-16  Score=130.31  Aligned_cols=213  Identities=12%  Similarity=0.109  Sum_probs=169.0

Q ss_pred             CCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe-cCCEEEEeecCCeEEEEECcCCCccce
Q psy14511        241 NAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW-NGNLLSCGTIGGNILHYDVRTHSDYPT  319 (488)
Q Consensus       241 ~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~  319 (488)
                      .-....+.++.+|++++.+ +..|.|..+|..+++....+.. ...|.++.| .+..+++......++|||-..  ..+.
T Consensus       129 eFGPY~~~ytrnGrhlllg-GrKGHlAa~Dw~t~~L~~Ei~v-~Etv~Dv~~LHneq~~AVAQK~y~yvYD~~G--tElH  204 (545)
T KOG1272|consen  129 EFGPYHLDYTRNGRHLLLG-GRKGHLAAFDWVTKKLHFEINV-METVRDVTFLHNEQFFAVAQKKYVYVYDNNG--TELH  204 (545)
T ss_pred             ccCCeeeeecCCccEEEec-CCccceeeeecccceeeeeeeh-hhhhhhhhhhcchHHHHhhhhceEEEecCCC--cEEe
Confidence            3346688999999999999 9999999999999888777753 457788888 444444455677899999764  3455


Q ss_pred             eeecCCccEEEEEEccCCcEEEEEec-CeEEEEECCCCCCCcccceeee-----eecCCCCEEEEEccCCCCeEEEEeCC
Q psy14511        320 AITREGDVVCGLKWSPNGRYLASGSN-NTVKIWDFRQLDAKRPLGLIVP-----KLKREGRELVTSHGKQDCSLKMWEYP  393 (488)
Q Consensus       320 ~~~~~~~~i~~~~~s~~~~~l~~~~d-~~i~iwd~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~g~~~~~i~i~d~~  393 (488)
                      .+..|. .|..+.|-|..-+|+++++ |.++.-|+..++....+..-..     +-+|-+..+-+  |..+|+|.+|...
T Consensus       205 Clk~~~-~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~--GhsnGtVSlWSP~  281 (545)
T KOG1272|consen  205 CLKRHI-RVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHL--GHSNGTVSLWSPN  281 (545)
T ss_pred             ehhhcC-chhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEE--cCCCceEEecCCC
Confidence            555554 4889999999989999987 9999999999977666554432     44565555656  8999999999999


Q ss_pred             CcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccccccccCCcceEEeecCCCc
Q psy14511        394 RLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKARQVGSGSSLEFAILKQP  460 (488)
Q Consensus       394 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~~~~~~~v~~~~~s~~~~~  460 (488)
                      ..+++..+..|.++|.++++.++|+|+||.+.|..++|||+..-.........-+...+.||..|..
T Consensus       282 skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~tp~~a~~ls~SqkglL  348 (545)
T KOG1272|consen  282 SKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRTPHPASNLSLSQKGLL  348 (545)
T ss_pred             CcchHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeeccccccceeecCCCccccccccccce
Confidence            9999999999999999999999999999999999999999998775543333556677777775443

>KOG1354|consensus

Probab=99.63  E-value=2e-14  Score=117.79  Aligned_cols=128  Identities=16%  Similarity=0.253  Sum_probs=83.7

Q ss_pred             CceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCccceee
Q psy14511        242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAI  321 (488)
Q Consensus       242 ~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~  321 (488)
                      .-|++..|+|....+++-+++.|+|++.|++.....                         |..-+++...........+
T Consensus       214 eVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLC-------------------------d~hsKlfEepedp~~rsff  268 (433)
T KOG1354|consen  214 EVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALC-------------------------DAHSKLFEEPEDPSSRSFF  268 (433)
T ss_pred             HHHhhhccCHhHccEEEEecCCCcEEEeechhhhhh-------------------------cchhhhhccccCCcchhhH
Confidence            357888899976544444389999999999863211                         1111122221111222233


Q ss_pred             ecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCC-ccc--------------------ceeeeeecCCCCEEEEEc
Q psy14511        322 TREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAK-RPL--------------------GLIVPKLKREGRELVTSH  380 (488)
Q Consensus       322 ~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~-~~~--------------------~~~~~~~~~~~~~l~~~~  380 (488)
                      .+--..|..+.|+++|+++++-.--++++||+.....+ ...                    ..+.++|+.++..+++  
T Consensus       269 seiIsSISDvKFs~sGryilsRDyltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~~~v~T--  346 (433)
T KOG1354|consen  269 SEIISSISDVKFSHSGRYILSRDYLTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGNDSYVMT--  346 (433)
T ss_pred             HHHhhhhhceEEccCCcEEEEeccceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCCcceEec--
Confidence            33345688999999999999876699999999543221 111                    1123488888889999  


Q ss_pred             cCCCCeEEEEeCCCcc
Q psy14511        381 GKQDCSLKMWEYPRLH  396 (488)
Q Consensus       381 g~~~~~i~i~d~~~~~  396 (488)
                      |+..+.+++++...|.
T Consensus       347 Gsy~n~frvf~~~~gs  362 (433)
T KOG1354|consen  347 GSYNNVFRVFNLARGS  362 (433)
T ss_pred             ccccceEEEecCCCCc
Confidence            9999999999976654

>KOG2315|consensus

Probab=99.63  E-value=5e-13  Score=116.95  Aligned_cols=325  Identities=16%  Similarity=0.184  Sum_probs=196.4

Q ss_pred             cCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-----------CCeEEEEeccccCcCC
Q psy14511          3 WNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-----------NNTVKIWDFRQLDAKR   71 (488)
Q Consensus         3 ~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-----------d~~i~vwd~~~~~~~~   71 (488)
                      .+|+++|.+. +..+.|++..+...+....   ...+.++.|||-|++|.+=.           ...+.+|+++++....
T Consensus        44 ~~G~lfA~~~-~~~v~i~~~~~~~~~lt~~---~~~~~~L~fSP~g~yL~T~e~~~i~~~~~~~~pn~~v~~vet~~~~s  119 (566)
T KOG2315|consen   44 NNGRLFAYSD-NQVVKVFEIATLKVVLCVE---LKKTYDLLFSPKGNYLLTWEPWAIYGPKNASNPNVLVYNVETGVQRS  119 (566)
T ss_pred             CCCcEEEEEc-CCeEEEEEccCCcEEEEec---cceeeeeeecccccccccccccccccCCCCCCCceeeeeeccceehh
Confidence            4788888765 7789999998886332322   22689999999999998721           2467799999833222


Q ss_pred             CcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeee
Q psy14511         72 PQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGF  151 (488)
Q Consensus        72 ~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (488)
                      .+. .+ .... ++..|++|.. |++--.   .+.+.+|++.+.+... ...+...+....+++.+.             
T Consensus       120 ~~q-~k-~Q~~-W~~qfs~dEs-l~arlv---~nev~f~~~~~f~~~~-~kl~~~~i~~f~lSpgp~-------------  178 (566)
T KOG2315|consen  120 QIQ-KK-MQNG-WVPQFSIDES-LAARLV---SNEVQFYDLGSFKTIQ-HKLSVSGITMLSLSPGPE-------------  178 (566)
T ss_pred             hee-hh-hhcC-cccccccchh-hhhhhh---cceEEEEecCCcccee-eeeeccceeeEEecCCCC-------------
Confidence            221 11 2222 6899999875 333333   6789999987633211 111222222222222110             


Q ss_pred             eccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEE------EECCCeEEEEEC
Q psy14511        152 EIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLA------VALDTSVYTWNT  225 (488)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~d~~v~iw~~  225 (488)
                                                                               ...++      .+.-..|++|..
T Consensus       179 ---------------------------------------------------------~~~vAvyvPe~kGaPa~vri~~~  201 (566)
T KOG2315|consen  179 ---------------------------------------------------------PPFVAVYVPEKKGAPASVRIYKY  201 (566)
T ss_pred             ---------------------------------------------------------CceEEEEccCCCCCCcEEEEecc
Confidence                                                                     01111      124457888877


Q ss_pred             CCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEe--CC---------CCcEEEEECCcceeeeeeccccccEEEEEe--
Q psy14511        226 KTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTN--TC---------TEYIDLWHEQEERLIQKLRTHMHQVIAMCW--  292 (488)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~~---------~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--  292 (488)
                      .....-............=-.+.|++-|.-|++-.  ..         ..++++.+++...+...+ ...++|.++.|  
T Consensus       202 ~~~~~~~~~a~ksFFkadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L-~k~GPVhdv~W~~  280 (566)
T KOG2315|consen  202 PEEGQHQPVANKSFFKADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPL-LKEGPVHDVTWSP  280 (566)
T ss_pred             ccccccchhhhccccccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEec-CCCCCceEEEECC
Confidence            63322222111111222233566777665443321  12         336788887744444444 35789999999  


Q ss_pred             cCCEEEE--eecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-c---CeEEEEECCCCCCCccccee-
Q psy14511        293 NGNLLSC--GTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-N---NTVKIWDFRQLDAKRPLGLI-  365 (488)
Q Consensus       293 ~~~~l~~--~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d---~~i~iwd~~~~~~~~~~~~~-  365 (488)
                      +++.+++  |-.--.+.|||++-.  ++  +.-..++-+++-|+|.|++++.++ +   |.+.|||+.+.+....+... 
T Consensus       281 s~~EF~VvyGfMPAkvtifnlr~~--~v--~df~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a~~  356 (566)
T KOG2315|consen  281 SGREFAVVYGFMPAKVTIFNLRGK--PV--FDFPEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKAAN  356 (566)
T ss_pred             CCCEEEEEEecccceEEEEcCCCC--Ee--EeCCCCCccceEECCCCCEEEEeecCCCCCceEEEeccchhhccccccCC
Confidence            4654443  556678999998752  33  333445567899999999999888 3   99999999986544333322 


Q ss_pred             --eeeecCCCCEEEEEccC----CCCeEEEEeCCCcceeEEEeeccccEEEEEEcCC
Q psy14511        366 --VPKLKREGRELVTSHGK----QDCSLKMWEYPRLHLIEELKIHQERILSAVLSPD  416 (488)
Q Consensus       366 --~~~~~~~~~~l~~~~g~----~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~  416 (488)
                        ...|+|||+++++++.+    -|+.++||++. |..+..-.- ......+.|-|-
T Consensus       357 tt~~eW~PdGe~flTATTaPRlrvdNg~Kiwhyt-G~~l~~~~f-~sEL~qv~W~P~  411 (566)
T KOG2315|consen  357 TTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYT-GSLLHEKMF-KSELLQVEWRPF  411 (566)
T ss_pred             ceEEEEcCCCcEEEEEeccccEEecCCeEEEEec-Cceeehhhh-hHhHhheeeeec
Confidence              44999999999997544    37889999975 555543221 125777888763

>KOG1310|consensus

Probab=99.63  E-value=1.5e-14  Score=125.83  Aligned_cols=190  Identities=16%  Similarity=0.171  Sum_probs=116.1

Q ss_pred             CCCceEEEEEcCCC-CeEEEEeCCCCcEEEEECCc----------ceeeeeeccccccEEEEEe--c-CCEEEEeecCCe
Q psy14511        240 DNAYISCVAWKPRT-TDLAVTNTCTEYIDLWHEQE----------ERLIQKLRTHMHQVIAMCW--N-GNLLSCGTIGGN  305 (488)
Q Consensus       240 ~~~~i~~~~~~~~~-~~l~~~~~~~~~i~i~d~~~----------~~~~~~~~~~~~~v~~~~~--~-~~~l~~~~~dg~  305 (488)
                      |...|.++.|-|.. +.++++|..|..|+++|+..          ......+..|...|..++.  + ++.+.++++||.
T Consensus        92 HtaNIFsvKFvP~tnnriv~sgAgDk~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGt  171 (758)
T KOG1310|consen   92 HTANIFSVKFVPYTNNRIVLSGAGDKLIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGT  171 (758)
T ss_pred             cccceeEEeeeccCCCeEEEeccCcceEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcc
Confidence            88899999999853 34444449999999999974          2334556678888888877  3 489999999999


Q ss_pred             EEEEECcCCCccceeeec---------CCccEEEEEEccCC-cEEEEEe-cCeEEEEECCCCCCCccccee-eeeecCCC
Q psy14511        306 ILHYDVRTHSDYPTAITR---------EGDVVCGLKWSPNG-RYLASGS-NNTVKIWDFRQLDAKRPLGLI-VPKLKREG  373 (488)
Q Consensus       306 i~i~d~~~~~~~~~~~~~---------~~~~i~~~~~s~~~-~~l~~~~-d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~  373 (488)
                      |+-||++....+......         .--...++..+|.. .+||+|+ |-..++||.+....  .+... ...++|- 
T Consensus       172 irQyDiREph~c~p~~~~~~~l~ny~~~lielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lk--s~~s~~~~~~~pp-  248 (758)
T KOG1310|consen  172 IRQYDIREPHVCNPDEDCPSILVNYNPQLIELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLK--SFRSDGTMNTCPP-  248 (758)
T ss_pred             eeeecccCCccCCccccccHHHHHhchhhheeeeeeecCCCCceEEecCCCchhhhhhhhhhcc--CCCCCccccCCCC-
Confidence            999999985433222111         11235688999965 5777877 68899999643211  00000 0001110 


Q ss_pred             CEEEEEccCCCCeEEEEeCCCcceeEE-EeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcc
Q psy14511        374 RELVTSHGKQDCSLKMWEYPRLHLIEE-LKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKK  440 (488)
Q Consensus       374 ~~l~~~~g~~~~~i~i~d~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~  440 (488)
                              -.++.++-|.....+..+- +......++-++|+|+|.-|+..-.--.|+++|+...+..
T Consensus       249 --------~~~~cv~yf~p~hlkn~~gn~~~~~~~~t~vtfnpNGtElLvs~~gEhVYlfdvn~~~~~  308 (758)
T KOG1310|consen  249 --------KDCRCVRYFSPGHLKNSQGNLDRYITCCTYVTFNPNGTELLVSWGGEHVYLFDVNEDKSP  308 (758)
T ss_pred             --------cccchhheecCccccCcccccccceeeeEEEEECCCCcEEEEeeCCeEEEEEeecCCCCc
Confidence                    0111122221111000000 1111123678899999987766655568999999987765

>KOG2321|consensus

Probab=99.62  E-value=1.4e-13  Score=120.52  Aligned_cols=190  Identities=16%  Similarity=0.231  Sum_probs=141.0

Q ss_pred             ceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEec--CCEEEEeecCCeEEEEECcCCCccce-
Q psy14511        243 YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWN--GNLLSCGTIGGNILHYDVRTHSDYPT-  319 (488)
Q Consensus       243 ~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~-  319 (488)
                      .-..++++.-..-|+++ +....|+-+++..|+.+..+....+.++++..+  ..+|++|+.+|.+.+||.+....+-. 
T Consensus       135 ~GRDm~y~~~scDly~~-gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l  213 (703)
T KOG2321|consen  135 FGRDMKYHKPSCDLYLV-GSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTL  213 (703)
T ss_pred             CCccccccCCCccEEEe-ecCcceEEEEccccccccccccccccceeeeecCccceEEecccCceEEEecchhhhhheee
Confidence            34566666555556666 567778889999999999998888888888884  68899999999999999987542211 


Q ss_pred             ----eeecCCc-----cEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccce------eeeeecCC--CCEEEEEcc
Q psy14511        320 ----AITREGD-----VVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGL------IVPKLKRE--GRELVTSHG  381 (488)
Q Consensus       320 ----~~~~~~~-----~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~------~~~~~~~~--~~~l~~~~g  381 (488)
                          ....|..     .|+++.|+.+|-.+++|+ .|.+.|||++..+....-..      ..-.|.+.  ...+++   
T Consensus       214 ~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S---  290 (703)
T KOG2321|consen  214 DAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLDWQDTDQQNKVVS---  290 (703)
T ss_pred             ecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCCccceeeecccccCCCceEEe---
Confidence                1122222     389999999999999999 59999999997643221111      11145443  344554   


Q ss_pred             CCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCC
Q psy14511        382 KQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPR  437 (488)
Q Consensus       382 ~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~  437 (488)
                      .+...++|||-.+|+....+... ..++.+|+-|++.+++++-.++.+..|=+..-
T Consensus       291 ~Dk~~~kiWd~~~Gk~~asiEpt-~~lND~C~~p~sGm~f~Ane~~~m~~yyiP~L  345 (703)
T KOG2321|consen  291 MDKRILKIWDECTGKPMASIEPT-SDLNDFCFVPGSGMFFTANESSKMHTYYIPSL  345 (703)
T ss_pred             cchHHhhhcccccCCceeecccc-CCcCceeeecCCceEEEecCCCcceeEEcccc
Confidence            56788999999999998888744 45999999999999999999988877766643

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=99.61  E-value=3e-11  Score=105.11  Aligned_cols=235  Identities=13%  Similarity=0.109  Sum_probs=150.3

Q ss_pred             CCCeEEEEECCCCceEEEEecCCC----CCCceEEEEEcCCCCeEEEEeCC-CCcEEEEECCcceeeeeeccccccEEEE
Q psy14511        216 LDTSVYTWNTKTNKTQLLVEYPTY----DNAYISCVAWKPRTTDLAVTNTC-TEYIDLWHEQEERLIQKLRTHMHQVIAM  290 (488)
Q Consensus       216 ~d~~v~iw~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~~~~~-~~~i~i~d~~~~~~~~~~~~~~~~v~~~  290 (488)
                      .+..|.+||..+.+....+..+..    .......++++|||+++++..-. +..|.+.|+.+++.+..+.-.. ...-+
T Consensus        75 ~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~-~~~vy  153 (352)
T TIGR02658        75 RTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPD-CYHIF  153 (352)
T ss_pred             CCCEEEEEECccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCC-CcEEE
Confidence            478999999999999888876431    02234578999999999988324 7899999999999888876422 11111


Q ss_pred             EecCCEEEEeecCCeEEEEECcCCCccc----eeeecCCccE-EEEEEcc-CCcEEEEEecCeEEEEECCCCCCC--ccc
Q psy14511        291 CWNGNLLSCGTIGGNILHYDVRTHSDYP----TAITREGDVV-CGLKWSP-NGRYLASGSNNTVKIWDFRQLDAK--RPL  362 (488)
Q Consensus       291 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~----~~~~~~~~~i-~~~~~s~-~~~~l~~~~d~~i~iwd~~~~~~~--~~~  362 (488)
                      ........+.+.||......+....+..    ..+.....++ ..-.|.+ +|+++....+|.|.+.|+...+..  ..+
T Consensus       154 ~t~e~~~~~~~~Dg~~~~v~~d~~g~~~~~~~~vf~~~~~~v~~rP~~~~~dg~~~~vs~eG~V~~id~~~~~~~~~~~~  233 (352)
T TIGR02658       154 PTANDTFFMHCRDGSLAKVGYGTKGNPKIKPTEVFHPEDEYLINHPAYSNKSGRLVWPTYTGKIFQIDLSSGDAKFLPAI  233 (352)
T ss_pred             EecCCccEEEeecCceEEEEecCCCceEEeeeeeecCCccccccCCceEcCCCcEEEEecCCeEEEEecCCCcceeccee
Confidence            1222222233345544443333322111    0111100110 0114456 888888877899999996543221  111


Q ss_pred             cee---------------eeeecCCCCEEEEEccC--------CCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCC-
Q psy14511        363 GLI---------------VPKLKREGRELVTSHGK--------QDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQT-  418 (488)
Q Consensus       363 ~~~---------------~~~~~~~~~~l~~~~g~--------~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~-  418 (488)
                      ...               ..+++++++.++++.-.        ..+.|.++|.++++.+..+.- ...+..++++||++ 
T Consensus       234 ~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~v-G~~~~~iavS~Dgkp  312 (352)
T TIGR02658       234 EAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIEL-GHEIDSINVSQDAKP  312 (352)
T ss_pred             eeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeC-CCceeeEEECCCCCe
Confidence            110               13889999999884211        125899999999999988863 45789999999999 


Q ss_pred             EEEEEe-CCCcEEEEecCCCCccccccccCCcceE
Q psy14511        419 CVAAAS-ADETISIWNCFPRDKKRKARQVGSGSSL  452 (488)
Q Consensus       419 ~l~t~~-~dg~v~iw~~~~~~~~~~~~~~~~v~~~  452 (488)
                      +|++.. .++.|.+.|..+++..+....-+....+
T Consensus       313 ~lyvtn~~s~~VsViD~~t~k~i~~i~~vg~~P~~  347 (352)
T TIGR02658       313 LLYALSTGDKTLYIFDAETGKELSSVNQLGRGPQV  347 (352)
T ss_pred             EEEEeCCCCCcEEEEECcCCeEEeeeccCCCCCeE
Confidence            777666 5788999999999888665444443333

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=99.61  E-value=1.8e-11  Score=109.71  Aligned_cols=198  Identities=17%  Similarity=0.239  Sum_probs=131.3

Q ss_pred             CceEEEEEcCCCCeEEEEeCCCCcEEEEECCc-ceeeee---ec----------cccccEEEEEe--cCCEEEEeec-CC
Q psy14511        242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE-ERLIQK---LR----------THMHQVIAMCW--NGNLLSCGTI-GG  304 (488)
Q Consensus       242 ~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~-~~~~~~---~~----------~~~~~v~~~~~--~~~~l~~~~~-dg  304 (488)
                      .....++++|++++++++...+|.|.++++.. +.....   +.          .......++.+  +++++++... ..
T Consensus        87 ~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D  166 (345)
T PF10282_consen   87 SSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGAD  166 (345)
T ss_dssp             SCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTT
T ss_pred             CCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCC
Confidence            34567999999999999977899999999976 322221   11          11234566666  6787777543 45


Q ss_pred             eEEEEECcCCCcccee----eecCCccEEEEEEccCCcEEEEEec--CeEEEEECC--CCCC--Cccccee---------
Q psy14511        305 NILHYDVRTHSDYPTA----ITREGDVVCGLKWSPNGRYLASGSN--NTVKIWDFR--QLDA--KRPLGLI---------  365 (488)
Q Consensus       305 ~i~i~d~~~~~~~~~~----~~~~~~~i~~~~~s~~~~~l~~~~d--~~i~iwd~~--~~~~--~~~~~~~---------  365 (488)
                      .|++|++......+..    ........+.++|+|+++++.+..+  +.|.++++.  ++..  .+.+...         
T Consensus       167 ~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~  246 (345)
T PF10282_consen  167 RVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENA  246 (345)
T ss_dssp             EEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSS
T ss_pred             EEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCC
Confidence            7999999765422211    2234455789999999999988884  999999988  2211  1111111         


Q ss_pred             --eeeecCCCCEEEEEccCCCCeEEEEeCC--Ccc--eeEEEeeccccEEEEEEcCCCCEEEEEe-CCCcEEEEecC--C
Q psy14511        366 --VPKLKREGRELVTSHGKQDCSLKMWEYP--RLH--LIEELKIHQERILSAVLSPDQTCVAAAS-ADETISIWNCF--P  436 (488)
Q Consensus       366 --~~~~~~~~~~l~~~~g~~~~~i~i~d~~--~~~--~~~~~~~~~~~v~~~~~s~~~~~l~t~~-~dg~v~iw~~~--~  436 (488)
                        ...++|||++|+++ ....++|.+|++.  +++  .+..+.........++++|+|++|+++. .++.|.+|+++  +
T Consensus       247 ~~~i~ispdg~~lyvs-nr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~~t  325 (345)
T PF10282_consen  247 PAEIAISPDGRFLYVS-NRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDPDT  325 (345)
T ss_dssp             EEEEEE-TTSSEEEEE-ECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTT
T ss_pred             ceeEEEecCCCEEEEE-eccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeCCC
Confidence              11899999999987 4558889999983  333  3334443344589999999999999887 55789999875  4


Q ss_pred             CCcc
Q psy14511        437 RDKK  440 (488)
Q Consensus       437 ~~~~  440 (488)
                      +...
T Consensus       326 G~l~  329 (345)
T PF10282_consen  326 GKLT  329 (345)
T ss_dssp             TEEE
T ss_pred             CcEE
Confidence            4443

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.61  E-value=6.4e-13  Score=123.26  Aligned_cols=231  Identities=13%  Similarity=0.131  Sum_probs=142.6

Q ss_pred             eEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec----CCeEEEEeccccCcCCCcccccccccceeEEEEecC
Q psy14511         16 NILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS----NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPW   91 (488)
Q Consensus        16 ~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~----d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~   91 (488)
                      .|.++|.....  .+.+..|...+.+.+|+|||+.|+..+    +..|.+||+.+++.. .   +..+.+.+....|+||
T Consensus       183 ~l~~~d~dg~~--~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~-~---l~~~~g~~~~~~~SPD  256 (435)
T PRK05137        183 RLAIMDQDGAN--VRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE-L---VGNFPGMTFAPRFSPD  256 (435)
T ss_pred             EEEEECCCCCC--cEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE-E---eecCCCcccCcEECCC
Confidence            78888876544  355778888999999999999998875    468999999875432 2   3345567788999999


Q ss_pred             CCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceee
Q psy14511         92 EPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQF  171 (488)
Q Consensus        92 ~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (488)
                      |+.++.+.+......|.+||+.++.... +..+......                                         
T Consensus       257 G~~la~~~~~~g~~~Iy~~d~~~~~~~~-Lt~~~~~~~~-----------------------------------------  294 (435)
T PRK05137        257 GRKVVMSLSQGGNTDIYTMDLRSGTTTR-LTDSPAIDTS-----------------------------------------  294 (435)
T ss_pred             CCEEEEEEecCCCceEEEEECCCCceEE-ccCCCCccCc-----------------------------------------
Confidence            9988766653112347777887765422 2111110000                                         


Q ss_pred             ecccccccccccCCCceeecCCCccccceeeeeeeC--CCcEEEEE-C--CCeEEEEECCCCceEEEEecCCCCCCceEE
Q psy14511        172 LRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG--YHDTLAVA-L--DTSVYTWNTKTNKTQLLVEYPTYDNAYISC  246 (488)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~--d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~  246 (488)
                                                      ..|+  +..++..+ .  ...|+++|+.+++...+..    ....+..
T Consensus       295 --------------------------------~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~~lt~----~~~~~~~  338 (435)
T PRK05137        295 --------------------------------PSYSPDGSQIVFESDRSGSPQLYVMNADGSNPRRISF----GGGRYST  338 (435)
T ss_pred             --------------------------------eeEcCCCCEEEEEECCCCCCeEEEEECCCCCeEEeec----CCCcccC
Confidence                                            1222  22344443 2  2368889988776554433    2344567


Q ss_pred             EEEcCCCCeEEEEeCCC--CcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecC------CeEEEEECcCCCc
Q psy14511        247 VAWKPRTTDLAVTNTCT--EYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIG------GNILHYDVRTHSD  316 (488)
Q Consensus       247 ~~~~~~~~~l~~~~~~~--~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d------g~i~i~d~~~~~~  316 (488)
                      ..|+|+|+.++......  ..|.+||+..+.. ..+.. ...+..+.|  ||+.|+..+.+      ..++++|+.... 
T Consensus       339 ~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~-~~lt~-~~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~~-  415 (435)
T PRK05137        339 PVWSPRGDLIAFTKQGGGQFSIGVMKPDGSGE-RILTS-GFLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTGRN-  415 (435)
T ss_pred             eEECCCCCEEEEEEcCCCceEEEEEECCCCce-EeccC-CCCCCCCeECCCCCEEEEEEccCCCCCcceEEEEECCCCc-
Confidence            88999999998873323  3577888765432 33322 223445555  78887765543      257888886543 


Q ss_pred             cceeeecCCccEEEEEEcc
Q psy14511        317 YPTAITREGDVVCGLKWSP  335 (488)
Q Consensus       317 ~~~~~~~~~~~i~~~~~s~  335 (488)
                       ...+. ....+...+|+|
T Consensus       416 -~~~l~-~~~~~~~p~Wsp  432 (435)
T PRK05137        416 -EREVP-TPGDASDPAWSP  432 (435)
T ss_pred             -eEEcc-CCCCccCcccCC
Confidence             23333 233456677776

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=99.61  E-value=2.3e-11  Score=101.45  Aligned_cols=195  Identities=17%  Similarity=0.208  Sum_probs=130.6

Q ss_pred             CceEEEEEcCCCCeEEEEeCCCCcEEEEECCc-ceeeee--ecccccc----------EEEEEe--cCCEEEEeecC-Ce
Q psy14511        242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE-ERLIQK--LRTHMHQ----------VIAMCW--NGNLLSCGTIG-GN  305 (488)
Q Consensus       242 ~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~-~~~~~~--~~~~~~~----------v~~~~~--~~~~l~~~~~d-g~  305 (488)
                      .+.+.+++++++++++++....|.|.++-++. |.....  ...|.+.          +....+  ++++|++.+.. -.
T Consensus        89 ~~p~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dr  168 (346)
T COG2706          89 SPPCYVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDR  168 (346)
T ss_pred             CCCeEEEECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCce
Confidence            34478999999999999988899999998865 322111  1123222          444444  78888887543 46


Q ss_pred             EEEEECcCCCccce--eeecCCccEEEEEEccCCcEEEEEec--CeEEEEECCCC-CCCccccee--------------e
Q psy14511        306 ILHYDVRTHSDYPT--AITREGDVVCGLKWSPNGRYLASGSN--NTVKIWDFRQL-DAKRPLGLI--------------V  366 (488)
Q Consensus       306 i~i~d~~~~~~~~~--~~~~~~~~i~~~~~s~~~~~l~~~~d--~~i~iwd~~~~-~~~~~~~~~--------------~  366 (488)
                      |.+|++..+.....  .........+.|.|+|++++..+.++  ++|.+|..... .....++..              .
T Consensus       169 i~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aa  248 (346)
T COG2706         169 IFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAA  248 (346)
T ss_pred             EEEEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeE
Confidence            99999986542111  11133445788999999999998885  99999999874 222222222              1


Q ss_pred             eeecCCCCEEEEEccCCCCeEEEEeCCCc-ceeEE---EeeccccEEEEEEcCCCCEEEEEeCC-CcEEEEecCCC
Q psy14511        367 PKLKREGRELVTSHGKQDCSLKMWEYPRL-HLIEE---LKIHQERILSAVLSPDQTCVAAASAD-ETISIWNCFPR  437 (488)
Q Consensus       367 ~~~~~~~~~l~~~~g~~~~~i~i~d~~~~-~~~~~---~~~~~~~v~~~~~s~~~~~l~t~~~d-g~v~iw~~~~~  437 (488)
                      -..++||++|.++.-+ ...|.+|.+... ..+..   ...+........|+|.+++|+++..+ ..|.+|.++..
T Consensus       249 Ihis~dGrFLYasNRg-~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~~  323 (346)
T COG2706         249 IHISPDGRFLYASNRG-HDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAANQKSDNITVFERDKE  323 (346)
T ss_pred             EEECCCCCEEEEecCC-CCeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCCCEEEEEccCCCcEEEEEEcCC
Confidence            1789999999997433 447888877432 22222   22233347899999999999999866 56888887743

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=99.58  E-value=2.5e-12  Score=111.33  Aligned_cols=331  Identities=14%  Similarity=0.126  Sum_probs=205.1

Q ss_pred             ccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec----------------CCeEEEEecc
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS----------------NNTVKIWDFR   65 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~----------------d~~i~vwd~~   65 (488)
                      +..|++|++....| |.+|+-.....+.++  .|. .|..+.|||+++||.+=+                ++.+.|||..
T Consensus        41 SP~G~~l~~~~~~~-V~~~~g~~~~~l~~~--~~~-~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~n~~~vwd~~  116 (561)
T COG5354          41 SPLGTYLFSEHAAG-VECWGGPSKAKLVRF--RHP-DVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTSKNNVFVWDIA  116 (561)
T ss_pred             cCcchheehhhccc-eEEccccchhheeee--ecC-CceecccCcccceeeeeccCCccChhhccCCccccCceeEEecc
Confidence            34799999887665 899998877633332  344 499999999999999854                2358999999


Q ss_pred             ccCcCCCcccccccccc--ee-EEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccce
Q psy14511         66 QLDAKRPQVNNQCHLSA--VK-AIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRR  142 (488)
Q Consensus        66 ~~~~~~~~~~~~~h~~~--v~-~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (488)
                      ++..   +..+.+-..+  .+ -+.|+-++++++-..    ...+.|+++ ++.....-...........|+..+...  
T Consensus       117 sg~i---v~sf~~~~q~~~~Wp~~k~s~~D~y~ARvv----~~sl~i~e~-t~n~~~~p~~~lr~~gi~dFsisP~~n--  186 (561)
T COG5354         117 SGMI---VFSFNGISQPYLGWPVLKFSIDDKYVARVV----GSSLYIHEI-TDNIEEHPFKNLRPVGILDFSISPEGN--  186 (561)
T ss_pred             Ccee---EeeccccCCcccccceeeeeecchhhhhhc----cCeEEEEec-CCccccCchhhccccceeeEEecCCCC--
Confidence            8543   3333333333  44 688999988776654    457899997 333211000000000111111100000  


Q ss_pred             eEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEE-----EECC
Q psy14511        143 HLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLA-----VALD  217 (488)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~d  217 (488)
                                                                                       ...++.     .+..
T Consensus       187 -----------------------------------------------------------------~~~la~~tPEk~~kp  201 (561)
T COG5354         187 -----------------------------------------------------------------HDELAYWTPEKLNKP  201 (561)
T ss_pred             -----------------------------------------------------------------CceEEEEccccCCCC
Confidence                                                                             001111     1356


Q ss_pred             CeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEe----------CCCCcEEEEECCcceeeeeeccccccE
Q psy14511        218 TSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTN----------TCTEYIDLWHEQEERLIQKLRTHMHQV  287 (488)
Q Consensus       218 ~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~----------~~~~~i~i~d~~~~~~~~~~~~~~~~v  287 (488)
                      +++++|.+..+..+....+   ....-..+.|.+.|+++++-.          .....++|++++... +.....-.++|
T Consensus       202 a~~~i~sIp~~s~l~tk~l---fk~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~-i~V~~~~~~pV  277 (561)
T COG5354         202 AMVRILSIPKNSVLVTKNL---FKVSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERS-IPVEKDLKDPV  277 (561)
T ss_pred             cEEEEEEccCCCeeeeeee---EeecccEEEEecCCceEEEEEEEeeecccceeccceEEEEeecccc-cceeccccccc
Confidence            7899999887776665554   222334678899998877631          113467888877433 22222567899


Q ss_pred             EEEEe--cCCEE--EEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-c---CeEEEEECCCCCCC
Q psy14511        288 IAMCW--NGNLL--SCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-N---NTVKIWDFRQLDAK  359 (488)
Q Consensus       288 ~~~~~--~~~~l--~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d---~~i~iwd~~~~~~~  359 (488)
                      ..++|  .++.+  ++|...-.+.++|++..  ....+  ....-+.+.|+|.+++++.++ +   |.+.+||....-..
T Consensus       278 hdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N--l~~~~--Pe~~rNT~~fsp~~r~il~agF~nl~gni~i~~~~~rf~~  353 (561)
T COG5354         278 HDFTWEPLSSRFAVISGYMPASVSVFDLRGN--LRFYF--PEQKRNTIFFSPHERYILFAGFDNLQGNIEIFDPAGRFKV  353 (561)
T ss_pred             eeeeecccCCceeEEecccccceeecccccc--eEEec--CCcccccccccCcccEEEEecCCccccceEEeccCCceEE
Confidence            99999  44443  34467888999999864  33322  333345788999999999987 4   99999998754322


Q ss_pred             c-cc---ceeeeeecCCCCEEEEEccC----CCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCC
Q psy14511        360 R-PL---GLIVPKLKREGRELVTSHGK----QDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADE  427 (488)
Q Consensus       360 ~-~~---~~~~~~~~~~~~~l~~~~g~----~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg  427 (488)
                      . .+   ....+.|+||++++.+.+-+    .|..+.|||+......        ..+.+.|-|.+++..+.+.+.
T Consensus       354 ~~~~~~~n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g~~~f--------el~~~~W~p~~~~~ttsSs~~  421 (561)
T COG5354         354 AGAFNGLNTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYGAKVF--------ELTNITWDPSGQYVTTSSSCP  421 (561)
T ss_pred             EEEeecCCceEeeccCCceEEEecCCCcccccCcceEEEEecCchhh--------hhhhccccCCcccceeeccCC
Confidence            1 11   12234899999999886432    3788999998643322        356677877777776666554

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=99.58  E-value=1.6e-10  Score=99.53  Aligned_cols=164  Identities=11%  Similarity=0.161  Sum_probs=119.9

Q ss_pred             CCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCC-cEEEEECCcceeeeeeccccc
Q psy14511        207 GYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTE-YIDLWHEQEERLIQKLRTHMH  285 (488)
Q Consensus       207 ~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~-~i~i~d~~~~~~~~~~~~~~~  285 (488)
                      .++.+++.-..|+..+.+...+-.+++-     +.+.|.-..+..+++-++.+ ..|| .+-++|.++++ +..+...-+
T Consensus       330 ~~Gd~ia~VSRGkaFi~~~~~~~~iqv~-----~~~~VrY~r~~~~~e~~vig-t~dgD~l~iyd~~~~e-~kr~e~~lg  402 (668)
T COG4946         330 VNGDYIALVSRGKAFIMRPWDGYSIQVG-----KKGGVRYRRIQVDPEGDVIG-TNDGDKLGIYDKDGGE-VKRIEKDLG  402 (668)
T ss_pred             CCCcEEEEEecCcEEEECCCCCeeEEcC-----CCCceEEEEEccCCcceEEe-ccCCceEEEEecCCce-EEEeeCCcc
Confidence            4567777778888888887766544432     56668888888888888888 8888 89999998865 445555667


Q ss_pred             cEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-c----CeEEEEECCCCCC
Q psy14511        286 QVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-N----NTVKIWDFRQLDA  358 (488)
Q Consensus       286 ~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d----~~i~iwd~~~~~~  358 (488)
                      .|-++..  +|+.++.+.....+.+.|+.++. ....-....+-|+.++|||+++++|.+- +    ..|+++|+..++.
T Consensus       403 ~I~av~vs~dGK~~vvaNdr~el~vididngn-v~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Ki  481 (668)
T COG4946         403 NIEAVKVSPDGKKVVVANDRFELWVIDIDNGN-VRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKI  481 (668)
T ss_pred             ceEEEEEcCCCcEEEEEcCceEEEEEEecCCC-eeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeE
Confidence            7888777  78999999999999999999874 4444455567799999999999999875 3    6799999987643


Q ss_pred             Ccccc----eeeeeecCCCCEEEE
Q psy14511        359 KRPLG----LIVPKLKREGRELVT  378 (488)
Q Consensus       359 ~~~~~----~~~~~~~~~~~~l~~  378 (488)
                      -....    .+.++|.||+++|..
T Consensus       482 y~vTT~ta~DfsPaFD~d~ryLYf  505 (668)
T COG4946         482 YDVTTPTAYDFSPAFDPDGRYLYF  505 (668)
T ss_pred             EEecCCcccccCcccCCCCcEEEE
Confidence            22111    112255555555543

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.58  E-value=2.8e-13  Score=109.48  Aligned_cols=108  Identities=19%  Similarity=0.326  Sum_probs=73.6

Q ss_pred             CCceEEEeec----------CCeEEEEEcccCcccceeec-ccCceEEEEEEccCCcEEEEec---CCeEEEEeccccCc
Q psy14511          4 NGNLLSCGTI----------GGNILHYDVRTHSDYPTAIT-REGDVVCGLKWSPNGRYLASGS---NNTVKIWDFRQLDA   69 (488)
Q Consensus         4 dg~~la~g~~----------dg~i~iwd~~~~~~~~~~~~-~h~~~V~~l~~sp~g~~las~~---d~~i~vwd~~~~~~   69 (488)
                      +|++|++-..          -|...||.++........+. ...++|.+++|+|+|+.+|...   +..|.+||++.   
T Consensus        16 ~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~~---   92 (194)
T PF08662_consen   16 SGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVKG---   92 (194)
T ss_pred             cCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEEcCcc---
Confidence            6777764332          24566776644433333333 3445799999999999876652   68999999962   


Q ss_pred             CCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCee
Q psy14511         70 KRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKE  117 (488)
Q Consensus        70 ~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~  117 (488)
                       ..+..+  +...+..+.|+|+|+++++++.+...|.|.+||.++.+.
T Consensus        93 -~~i~~~--~~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~  137 (194)
T PF08662_consen   93 -KKIFSF--GTQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKK  137 (194)
T ss_pred             -cEeEee--cCCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEE
Confidence             233333  356788999999999999887543457799999875543

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.57  E-value=5.7e-13  Score=107.73  Aligned_cols=152  Identities=22%  Similarity=0.445  Sum_probs=103.7

Q ss_pred             EEEEEcCCCCeEEEEeCC---------CCcEEEEECCc-ceeeeeecc-ccccEEEEEe--cCCEEEE--eecCCeEEEE
Q psy14511        245 SCVAWKPRTTDLAVTNTC---------TEYIDLWHEQE-ERLIQKLRT-HMHQVIAMCW--NGNLLSC--GTIGGNILHY  309 (488)
Q Consensus       245 ~~~~~~~~~~~l~~~~~~---------~~~i~i~d~~~-~~~~~~~~~-~~~~v~~~~~--~~~~l~~--~~~dg~i~i~  309 (488)
                      ..+.|+|+|.+|++-...         -+...+|.++. ......+.- ..++|.+++|  +++.+++  |..++.+.+|
T Consensus         9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~ly   88 (194)
T PF08662_consen    9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLY   88 (194)
T ss_pred             EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEE
Confidence            467899999888876331         22355555532 233344432 3457999999  5666544  4467799999


Q ss_pred             ECcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEE
Q psy14511        310 DVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKM  389 (488)
Q Consensus       310 d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i  389 (488)
                      |++.  ..+..+  +...++.+.|+|+|++|++++-                                   +...|.+.+
T Consensus        89 d~~~--~~i~~~--~~~~~n~i~wsP~G~~l~~~g~-----------------------------------~n~~G~l~~  129 (194)
T PF08662_consen   89 DVKG--KKIFSF--GTQPRNTISWSPDGRFLVLAGF-----------------------------------GNLNGDLEF  129 (194)
T ss_pred             cCcc--cEeEee--cCCCceEEEECCCCCEEEEEEc-----------------------------------cCCCcEEEE
Confidence            9973  233333  3456788999999999998862                                   233456666


Q ss_pred             EeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeC------CCcEEEEecCCC
Q psy14511        390 WEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASA------DETISIWNCFPR  437 (488)
Q Consensus       390 ~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~------dg~v~iw~~~~~  437 (488)
                      ||.++.+.+.+.. |. .++.++|||||++|++++.      |..++||++...
T Consensus       130 wd~~~~~~i~~~~-~~-~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~G~  181 (194)
T PF08662_consen  130 WDVRKKKKISTFE-HS-DATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQGR  181 (194)
T ss_pred             EECCCCEEeeccc-cC-cEEEEEEcCCCCEEEEEEeccceeccccEEEEEecCe
Confidence            6666666666654 33 4789999999999999874      788999998644

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=99.57  E-value=3.9e-11  Score=103.27  Aligned_cols=210  Identities=13%  Similarity=0.060  Sum_probs=150.5

Q ss_pred             EEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeec-c---c---ccc--E------EEEEe-cCCEEEEeecCCeEEEEE
Q psy14511        247 VAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLR-T---H---MHQ--V------IAMCW-NGNLLSCGTIGGNILHYD  310 (488)
Q Consensus       247 ~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~-~---~---~~~--v------~~~~~-~~~~l~~~~~dg~i~i~d  310 (488)
                      =..+.||+.++..  ..|.|.+||..+.+.. .+. +   .   ..+  +      ...+. +|++++..+. |...+.+
T Consensus       272 R~~nsDGkrIvFq--~~GdIylydP~td~le-kldI~lpl~rk~k~~k~~~pskyledfa~~~Gd~ia~VSR-GkaFi~~  347 (668)
T COG4946         272 RNANSDGKRIVFQ--NAGDIYLYDPETDSLE-KLDIGLPLDRKKKQPKFVNPSKYLEDFAVVNGDYIALVSR-GKAFIMR  347 (668)
T ss_pred             cccCCCCcEEEEe--cCCcEEEeCCCcCcce-eeecCCccccccccccccCHHHhhhhhccCCCcEEEEEec-CcEEEEC
Confidence            3456789988876  7889999998774322 211 0   0   000  1      11222 6888888775 4556655


Q ss_pred             CcCCCccceeeecCCccEEEEEEccCCcEEEEEe-c-CeEEEEECCCCCCCccccee----eeeecCCCCEEEEEccCCC
Q psy14511        311 VRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-N-NTVKIWDFRQLDAKRPLGLI----VPKLKREGRELVTSHGKQD  384 (488)
Q Consensus       311 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d-~~i~iwd~~~~~~~~~~~~~----~~~~~~~~~~l~~~~g~~~  384 (488)
                      ...+   .....++...|.-..+.-+++-++.|. | ..+-|+|..+++..+....+    ....+++|+.+++  +...
T Consensus       348 ~~~~---~~iqv~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~kr~e~~lg~I~av~vs~dGK~~vv--aNdr  422 (668)
T COG4946         348 PWDG---YSIQVGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVKRIEKDLGNIEAVKVSPDGKKVVV--ANDR  422 (668)
T ss_pred             CCCC---eeEEcCCCCceEEEEEccCCcceEEeccCCceEEEEecCCceEEEeeCCccceEEEEEcCCCcEEEE--EcCc
Confidence            5432   223345556687777877888888888 6 59999999988755443333    2288999999999  6788


Q ss_pred             CeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCC----cEEEEecCCCCccccccccCCcceEEeecCCCc
Q psy14511        385 CSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADE----TISIWNCFPRDKKRKARQVGSGSSLEFAILKQP  460 (488)
Q Consensus       385 ~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg----~v~iw~~~~~~~~~~~~~~~~v~~~~~s~~~~~  460 (488)
                      ..+.+.|+.++.....-+...+-|+.+.|||+++++|-+--+|    .|+++|+.+++.-......+.-.+.+|-||++.
T Consensus       423 ~el~vididngnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vTT~ta~DfsPaFD~d~ry  502 (668)
T COG4946         423 FELWVIDIDNGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVTTPTAYDFSPAFDPDGRY  502 (668)
T ss_pred             eEEEEEEecCCCeeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEecCCcccccCcccCCCCcE
Confidence            8999999999987665556677899999999999999877664    689999999988766666666677899999998


Q ss_pred             eEEEE
Q psy14511        461 VSLTA  465 (488)
Q Consensus       461 ~~~~~  465 (488)
                      +-+-.
T Consensus       503 LYfLs  507 (668)
T COG4946         503 LYFLS  507 (668)
T ss_pred             EEEEe
Confidence            75543

>KOG2394|consensus

Probab=99.57  E-value=1e-12  Score=114.41  Aligned_cols=94  Identities=13%  Similarity=0.313  Sum_probs=86.8

Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCcc
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDY  317 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~  317 (488)
                      ....|...+|+|||++||+. +.||.++|||..+.+.+..++..-+...|++|  ||++|++|++|..|.||.+... +.
T Consensus       289 ~~g~in~f~FS~DG~~LA~V-SqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~er-RV  366 (636)
T KOG2394|consen  289 GEGSINEFAFSPDGKYLATV-SQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEER-RV  366 (636)
T ss_pred             ccccccceeEcCCCceEEEE-ecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEeccc-eE
Confidence            45589999999999999999 99999999999998888888888889999999  8999999999999999999885 57


Q ss_pred             ceeeecCCccEEEEEEcc
Q psy14511        318 PTAITREGDVVCGLKWSP  335 (488)
Q Consensus       318 ~~~~~~~~~~i~~~~~s~  335 (488)
                      +..-.+|.+.|..++|.|
T Consensus       367 VARGqGHkSWVs~VaFDp  384 (636)
T KOG2394|consen  367 VARGQGHKSWVSVVAFDP  384 (636)
T ss_pred             EEeccccccceeeEeecc
Confidence            888899999999999997

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=99.57  E-value=5.2e-11  Score=106.70  Aligned_cols=310  Identities=15%  Similarity=0.153  Sum_probs=175.0

Q ss_pred             EEEeecC----CeEEEEEcccCcccceee--cccCceEEEEEEccCCcEEEEec-----CCeEEEEecccc-CcCCCccc
Q psy14511          8 LSCGTIG----GNILHYDVRTHSDYPTAI--TREGDVVCGLKWSPNGRYLASGS-----NNTVKIWDFRQL-DAKRPQVN   75 (488)
Q Consensus         8 la~g~~d----g~i~iwd~~~~~~~~~~~--~~h~~~V~~l~~sp~g~~las~~-----d~~i~vwd~~~~-~~~~~~~~   75 (488)
                      +.+|++.    +.|.+|+++........+  ..-......++++|++++|.+..     ++.|..|++... .....+..
T Consensus         2 ~~vgsy~~~~~~gI~~~~~d~~~g~l~~~~~~~~~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~   81 (345)
T PF10282_consen    2 LYVGSYTNGKGGGIYVFRFDEETGTLTLVQTVAEGENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNS   81 (345)
T ss_dssp             EEEEECCSSSSTEEEEEEEETTTTEEEEEEEEEESSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEE
T ss_pred             EEEEcCCCCCCCcEEEEEEcCCCCCceEeeeecCCCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeee
Confidence            4556655    789999984322211211  12334467799999999998875     368999998753 12222222


Q ss_pred             ccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCC-CeeeeeeecCCCccccccccccccccceeEEEEEeeeecc
Q psy14511         76 NQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMN-GKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEID  154 (488)
Q Consensus        76 ~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (488)
                      ..........++++|++++|+++.-.  ++.+.++++.. |...........                      .+.   
T Consensus        82 ~~~~g~~p~~i~~~~~g~~l~vany~--~g~v~v~~l~~~g~l~~~~~~~~~----------------------~g~---  134 (345)
T PF10282_consen   82 VPSGGSSPCHIAVDPDGRFLYVANYG--GGSVSVFPLDDDGSLGEVVQTVRH----------------------EGS---  134 (345)
T ss_dssp             EEESSSCEEEEEECTTSSEEEEEETT--TTEEEEEEECTTSEEEEEEEEEES----------------------EEE---
T ss_pred             eccCCCCcEEEEEecCCCEEEEEEcc--CCeEEEEEccCCcccceeeeeccc----------------------CCC---
Confidence            22233456689999999999998864  99999999976 443222110000                      000   


Q ss_pred             ccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCC--CcEEEEE-CCCeEEEEECCCCc--
Q psy14511        155 RKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGY--HDTLAVA-LDTSVYTWNTKTNK--  229 (488)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~d~~v~iw~~~~~~--  229 (488)
                                                         -..+..........+.+++  +.+++.. ....|++|++....  
T Consensus       135 -----------------------------------g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~  179 (345)
T PF10282_consen  135 -----------------------------------GPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGK  179 (345)
T ss_dssp             -----------------------------------ESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-T
T ss_pred             -----------------------------------CCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCce
Confidence                                               0000000111122233333  3455544 56789999987655  


Q ss_pred             eEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECC--cceeeeeeccccccEEEEEecCCEEEEeecCCeEE
Q psy14511        230 TQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQ--EERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNIL  307 (488)
Q Consensus       230 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~--~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~  307 (488)
                      .........+.....+.++|+|+++++++....++.|.++++.  .+.. ...+                          
T Consensus       180 l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~-~~~~--------------------------  232 (345)
T PF10282_consen  180 LTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSL-TEIQ--------------------------  232 (345)
T ss_dssp             EEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEE-EEEE--------------------------
T ss_pred             EEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCce-eEEE--------------------------
Confidence            4332222222567789999999999998886788889999876  2211 1110                          


Q ss_pred             EEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-c-CeEEEEECCCC-CCCccccee--------eeeecCCCCEE
Q psy14511        308 HYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-N-NTVKIWDFRQL-DAKRPLGLI--------VPKLKREGREL  376 (488)
Q Consensus       308 i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d-~~i~iwd~~~~-~~~~~~~~~--------~~~~~~~~~~l  376 (488)
                      ......     ....+ ......++++|||++|.++. . +.|.+|++... .....+...        ...++|+|++|
T Consensus       233 ~~~~~~-----~~~~~-~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l  306 (345)
T PF10282_consen  233 TISTLP-----EGFTG-ENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYL  306 (345)
T ss_dssp             EEESCE-----TTSCS-SSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEE
T ss_pred             Eeeecc-----ccccc-cCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEE
Confidence            000000     00000 12466889999999998887 3 89999998432 122222221        11889999999


Q ss_pred             EEEccCCCCeEEEEeC--CCcceeEEEe-eccccEEEEEE
Q psy14511        377 VTSHGKQDCSLKMWEY--PRLHLIEELK-IHQERILSAVL  413 (488)
Q Consensus       377 ~~~~g~~~~~i~i~d~--~~~~~~~~~~-~~~~~v~~~~~  413 (488)
                      +++ +..++.|.+|++  ++|.+...-. ..-....|+.|
T Consensus       307 ~Va-~~~s~~v~vf~~d~~tG~l~~~~~~~~~~~p~ci~f  345 (345)
T PF10282_consen  307 YVA-NQDSNTVSVFDIDPDTGKLTPVGSSVPIPSPVCIVF  345 (345)
T ss_dssp             EEE-ETTTTEEEEEEEETTTTEEEEEEEEEESSSEEEEEE
T ss_pred             EEE-ecCCCeEEEEEEeCCCCcEEEecccccCCCCEEEeC
Confidence            986 567788998866  5666544332 12334556655

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>PRK01029 tolB translocation protein TolB; Provisional

Probab=99.56  E-value=3e-12  Score=117.38  Aligned_cols=235  Identities=11%  Similarity=0.089  Sum_probs=145.1

Q ss_pred             CeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEE--EEeCCCC--cEEEEECCcceeeeeeccccccEEEEEe-
Q psy14511        218 TSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLA--VTNTCTE--YIDLWHEQEERLIQKLRTHMHQVIAMCW-  292 (488)
Q Consensus       218 ~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~--~~~~~~~--~i~i~d~~~~~~~~~~~~~~~~v~~~~~-  292 (488)
                      ..|.+.|.+.+....+..    .......-+|+|||+.++  ..+..++  .|.+.++.+++.... ....+......| 
T Consensus       165 ~~l~~~d~dG~~~~~lt~----~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~l-t~~~g~~~~p~wS  239 (428)
T PRK01029        165 GELWSVDYDGQNLRPLTQ----EHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKI-LALQGNQLMPTFS  239 (428)
T ss_pred             ceEEEEcCCCCCceEccc----CCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceEe-ecCCCCccceEEC
Confidence            467788877766544433    344567789999997532  2324444  577778877643322 222333334455 


Q ss_pred             -cCCEEEEeec-CC----eEEEEECcCC--CccceeeecCCccEEEEEEccCCcEEEEEec--CeEEEE--ECCC-CCCC
Q psy14511        293 -NGNLLSCGTI-GG----NILHYDVRTH--SDYPTAITREGDVVCGLKWSPNGRYLASGSN--NTVKIW--DFRQ-LDAK  359 (488)
Q Consensus       293 -~~~~l~~~~~-dg----~i~i~d~~~~--~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d--~~i~iw--d~~~-~~~~  359 (488)
                       ||+.|+..+. +|    .+..|++..+  .................+|+|||+.|+..++  +...+|  ++.. +...
T Consensus       240 PDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~  319 (428)
T PRK01029        240 PRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSP  319 (428)
T ss_pred             CCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccce
Confidence             8888776543 22    3344676643  1222233233233467899999999888773  554555  4432 1111


Q ss_pred             cccc-----eeeeeecCCCCEEEEEccC-CCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeC---CCcEE
Q psy14511        360 RPLG-----LIVPKLKREGRELVTSHGK-QDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASA---DETIS  430 (488)
Q Consensus       360 ~~~~-----~~~~~~~~~~~~l~~~~g~-~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~---dg~v~  430 (488)
                      +.+.     .....|+|||+.++..... ....|++||+.+++... +......+....|+|||+.|+..+.   ...|+
T Consensus       320 ~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~-Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~  398 (428)
T PRK01029        320 RLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQ-LTTSPENKESPSWAIDSLHLVYSAGNSNESELY  398 (428)
T ss_pred             EEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEE-ccCCCCCccceEECCCCCEEEEEECCCCCceEE
Confidence            2111     1233899999999885322 13479999999887643 3333445778999999998876543   35789


Q ss_pred             EEecCCCCccccccccCCcceEEeecCC
Q psy14511        431 IWNCFPRDKKRKARQVGSGSSLEFAILK  458 (488)
Q Consensus       431 iw~~~~~~~~~~~~~~~~v~~~~~s~~~  458 (488)
                      +||+.+++........+.+...+|+|..
T Consensus       399 ~vdl~~g~~~~Lt~~~g~~~~p~Ws~~~  426 (428)
T PRK01029        399 LISLITKKTRKIVIGSGEKRFPSWGAFP  426 (428)
T ss_pred             EEECCCCCEEEeecCCCcccCceecCCC
Confidence            9999988877666666777889999853

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.56  E-value=3.3e-12  Score=118.17  Aligned_cols=228  Identities=16%  Similarity=0.143  Sum_probs=145.6

Q ss_pred             eEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCC--cEEEEECCcceeeeeeccccccEEEEEe--cC
Q psy14511        219 SVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTE--YIDLWHEQEERLIQKLRTHMHQVIAMCW--NG  294 (488)
Q Consensus       219 ~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~--~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~  294 (488)
                      .|.++|........+..    ....+.+..|+|||+.|+.....++  .|.++|+.+++... +...........|  ||
T Consensus       199 ~l~i~d~dG~~~~~l~~----~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~-lt~~~g~~~~~~wSPDG  273 (448)
T PRK04792        199 QLMIADYDGYNEQMLLR----SPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREK-VTSFPGINGAPRFSPDG  273 (448)
T ss_pred             EEEEEeCCCCCceEeec----CCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEE-ecCCCCCcCCeeECCCC
Confidence            67777876665443333    5567889999999999988733343  58888988765422 2222222234555  78


Q ss_pred             CEEEE-eecCCe--EEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEec----CeEEEEECCCCCCCccc-c---
Q psy14511        295 NLLSC-GTIGGN--ILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN----NTVKIWDFRQLDAKRPL-G---  363 (488)
Q Consensus       295 ~~l~~-~~~dg~--i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d----~~i~iwd~~~~~~~~~~-~---  363 (488)
                      +.|+. .+.+|.  |+++|+.++.  ...+..+.......+|+|||++|+..++    ..|.++|+.+++..+.. .   
T Consensus       274 ~~La~~~~~~g~~~Iy~~dl~tg~--~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~Lt~~g~~  351 (448)
T PRK04792        274 KKLALVLSKDGQPEIYVVDIATKA--LTRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSRLTFEGEQ  351 (448)
T ss_pred             CEEEEEEeCCCCeEEEEEECCCCC--eEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEEecCCCC
Confidence            87764 555664  7778887643  3444445555677899999999887763    35667777766432221 1   


Q ss_pred             eeeeeecCCCCEEEEEccCCCC--eEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCC-C--cEEEEecCCCC
Q psy14511        364 LIVPKLKREGRELVTSHGKQDC--SLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASAD-E--TISIWNCFPRD  438 (488)
Q Consensus       364 ~~~~~~~~~~~~l~~~~g~~~~--~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~d-g--~v~iw~~~~~~  438 (488)
                      .....|+|||++++.+. ..++  .|.++|+.+++.. .+... .......|+|||+.|+..+.+ |  .+++++.+...
T Consensus       352 ~~~~~~SpDG~~l~~~~-~~~g~~~I~~~dl~~g~~~-~lt~~-~~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~~G~~  428 (448)
T PRK04792        352 NLGGSITPDGRSMIMVN-RTNGKFNIARQDLETGAMQ-VLTST-RLDESPSVAPNGTMVIYSTTYQGKQVLAAVSIDGRF  428 (448)
T ss_pred             CcCeeECCCCCEEEEEE-ecCCceEEEEEECCCCCeE-EccCC-CCCCCceECCCCCEEEEEEecCCceEEEEEECCCCc
Confidence            11238999999998863 3334  5666788877643 33322 122356899999988876644 3  37777875554


Q ss_pred             ccccccccCCcceEEeec
Q psy14511        439 KKRKARQVGSGSSLEFAI  456 (488)
Q Consensus       439 ~~~~~~~~~~v~~~~~s~  456 (488)
                      ........+.+...+|+|
T Consensus       429 ~~~l~~~~g~~~~p~Wsp  446 (448)
T PRK04792        429 KARLPAGQGEVKSPAWSP  446 (448)
T ss_pred             eEECcCCCCCcCCCccCC
Confidence            444555566778889988

>KOG1240|consensus

Probab=99.55  E-value=3e-12  Score=122.19  Aligned_cols=200  Identities=13%  Similarity=0.116  Sum_probs=135.1

Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcce-------eeeeeccc-cccEEEEE-e---cCC-EEEEeecCCeE
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEER-------LIQKLRTH-MHQVIAMC-W---NGN-LLSCGTIGGNI  306 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~-------~~~~~~~~-~~~v~~~~-~---~~~-~l~~~~~dg~i  306 (488)
                      ....+.++...+.+..++++ +.||.|++.+++...       ..+....+ .+.+..+. +   ... .++.+...+.|
T Consensus      1097 ~~sr~~~vt~~~~~~~~Av~-t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~i 1175 (1431)
T KOG1240|consen 1097 EGSRVEKVTMCGNGDQFAVS-TKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRI 1175 (1431)
T ss_pred             cCCceEEEEeccCCCeEEEE-cCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccce
Confidence            45678889999999999999 999999999887621       11112222 23333333 3   344 78888889999


Q ss_pred             EEEECcCCCccc-eeeecCCccEEEEEEccCCcEEEEEec-CeEEEEECCCCCCCccccee---------eeeecCCCCE
Q psy14511        307 LHYDVRTHSDYP-TAITREGDVVCGLKWSPNGRYLASGSN-NTVKIWDFRQLDAKRPLGLI---------VPKLKREGRE  375 (488)
Q Consensus       307 ~i~d~~~~~~~~-~~~~~~~~~i~~~~~s~~~~~l~~~~d-~~i~iwd~~~~~~~~~~~~~---------~~~~~~~~~~  375 (488)
                      ..||.+...... .......+.|++++.+|.+.+++.|+. |.+.+||++=..........         .+.+.|....
T Consensus      1176 v~~D~r~~~~~w~lk~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~ 1255 (1431)
T KOG1240|consen 1176 VSWDTRMRHDAWRLKNQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESV 1255 (1431)
T ss_pred             EEecchhhhhHHhhhcCccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCce
Confidence            999998754322 222334467999999999999999995 99999999855332222111         1234444556


Q ss_pred             EEEEccCCCCeEEEEeCCCcceeEEEeecc-------------------ccEEEEEEcCCCCEEEEEeCCCcEEEEecCC
Q psy14511        376 LVTSHGKQDCSLKMWEYPRLHLIEELKIHQ-------------------ERILSAVLSPDQTCVAAASADETISIWNCFP  436 (488)
Q Consensus       376 l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~-------------------~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~  436 (488)
                      .++++....+.|.+|++.+|..-..+....                   -......+..-+..+.+|+.|..|+.||...
T Consensus      1256 ~vs~~~~~~nevs~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~ 1335 (1431)
T KOG1240|consen 1256 SVSAGSSSNNEVSTWNMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTR 1335 (1431)
T ss_pred             EEEecccCCCceeeeecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCC
Confidence            666533378899999999986665554331                   1112233334466899999999999999988


Q ss_pred             CCcc
Q psy14511        437 RDKK  440 (488)
Q Consensus       437 ~~~~  440 (488)
                      ++..
T Consensus      1336 p~~s 1339 (1431)
T KOG1240|consen 1336 PEIS 1339 (1431)
T ss_pred             cccc
Confidence            7655

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.55  E-value=2.4e-12  Score=119.73  Aligned_cols=229  Identities=16%  Similarity=0.165  Sum_probs=149.6

Q ss_pred             eEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCC--CcEEEEECCcceeeeeeccccccEEEEEe--cC
Q psy14511        219 SVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCT--EYIDLWHEQEERLIQKLRTHMHQVIAMCW--NG  294 (488)
Q Consensus       219 ~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~--~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~  294 (488)
                      .|.++|.+.+.......    +...+....|+|+|+.|+..+..+  ..|.+|++.+++... +....+......|  ||
T Consensus       180 ~l~~~d~~g~~~~~l~~----~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~-l~~~~g~~~~~~~SpDG  254 (430)
T PRK00178        180 TLQRSDYDGARAVTLLQ----SREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQ-ITNFEGLNGAPAWSPDG  254 (430)
T ss_pred             EEEEECCCCCCceEEec----CCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEE-ccCCCCCcCCeEECCCC
Confidence            57788887665544433    556789999999999998873333  368889998765433 2222333444566  78


Q ss_pred             CEEE-EeecCC--eEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEec--C--eEEEEECCCCCCCcccc----
Q psy14511        295 NLLS-CGTIGG--NILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN--N--TVKIWDFRQLDAKRPLG----  363 (488)
Q Consensus       295 ~~l~-~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d--~--~i~iwd~~~~~~~~~~~----  363 (488)
                      +.|+ +...+|  .|++||+.++.  ...+..+........|+|||+.|+..++  +  .|.++|+.+++..+...    
T Consensus       255 ~~la~~~~~~g~~~Iy~~d~~~~~--~~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt~~~~~  332 (430)
T PRK00178        255 SKLAFVLSKDGNPEIYVMDLASRQ--LSRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERVTFVGNY  332 (430)
T ss_pred             CEEEEEEccCCCceEEEEECCCCC--eEEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecCCCC
Confidence            7776 444454  68888998753  3344445555667899999998887774  3  57777877665322211    


Q ss_pred             eeeeeecCCCCEEEEEccCC-CCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCC---CcEEEEecCCCCc
Q psy14511        364 LIVPKLKREGRELVTSHGKQ-DCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASAD---ETISIWNCFPRDK  439 (488)
Q Consensus       364 ~~~~~~~~~~~~l~~~~g~~-~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~d---g~v~iw~~~~~~~  439 (488)
                      .....|+|+|+.++...... ...|.++|+.+++.. .+. +........|+|||+.++..+.+   ..+.++++.....
T Consensus       333 ~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~-~lt-~~~~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~~g~~~  410 (430)
T PRK00178        333 NARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSVR-ILT-DTSLDESPSVAPNGTMLIYATRQQGRGVLMLVSINGRVR  410 (430)
T ss_pred             ccceEECCCCCEEEEEEccCCceEEEEEECCCCCEE-Ecc-CCCCCCCceECCCCCEEEEEEecCCceEEEEEECCCCce
Confidence            11238999999998863211 235889999887653 332 22223356899999999887754   3577788865554


Q ss_pred             cccccccCCcceEEeec
Q psy14511        440 KRKARQVGSGSSLEFAI  456 (488)
Q Consensus       440 ~~~~~~~~~v~~~~~s~  456 (488)
                      .......+.+...+|+|
T Consensus       411 ~~l~~~~g~~~~p~ws~  427 (430)
T PRK00178        411 LPLPTAQGEVREPSWSP  427 (430)
T ss_pred             EECcCCCCCcCCCccCC
Confidence            44444556778888887

>KOG1409|consensus

Probab=99.55  E-value=9.1e-12  Score=102.56  Aligned_cols=306  Identities=15%  Similarity=0.179  Sum_probs=195.0

Q ss_pred             eEEEeecCCeEEEEEcc-cCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEecccc-CcCCCcccccccccce
Q psy14511          7 LLSCGTIGGNILHYDVR-THSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQL-DAKRPQVNNQCHLSAV   83 (488)
Q Consensus         7 ~la~g~~dg~i~iwd~~-~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~-~~~~~~~~~~~h~~~v   83 (488)
                      -+.+.+.|.+++||--. .++.-+.+...-..+++++++.++.+.|..|- +|++.-+.+... +..........|...|
T Consensus        38 gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ngtvtefs~sedfnkm~~~r~~~~h~~~v  117 (404)
T KOG1409|consen   38 GVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDNGTVTEFALSEDFNKMTFLKDYLAHQARV  117 (404)
T ss_pred             CeEEccccceeeeEEeccccccCchhhhhCCCCceEeeeeccceEEEEEEecceEEEEEhhhhhhhcchhhhhhhhhcce
Confidence            46778899999999644 34433444455667899999999999999997 799988876531 1122334456799999


Q ss_pred             eEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecccc
Q psy14511         84 KAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSK  163 (488)
Q Consensus        84 ~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (488)
                      ..+-|+...+.+++++.   |..+.---.+.+..+......                                       
T Consensus       118 ~~~if~~~~e~V~s~~~---dk~~~~hc~e~~~~lg~Y~~~---------------------------------------  155 (404)
T KOG1409|consen  118 SAIVFSLTHEWVLSTGK---DKQFAWHCTESGNRLGGYNFE---------------------------------------  155 (404)
T ss_pred             eeEEecCCceeEEEecc---ccceEEEeeccCCcccceEee---------------------------------------
Confidence            99999988888888886   766644444443322111000                                       


Q ss_pred             ccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCc
Q psy14511        164 RTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAY  243 (488)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~  243 (488)
                                                                                              .      .
T Consensus       156 ------------------------------------------------------------------------~------~  157 (404)
T KOG1409|consen  156 ------------------------------------------------------------------------T------P  157 (404)
T ss_pred             ------------------------------------------------------------------------c------c
Confidence                                                                                    0      0


Q ss_pred             eEEEEEcCCCCeEEEEeCCCCcEEEEEC--CcceeeeeeccccccEEEEEec--CCEEEEeecCCeEEEEECcCCCccce
Q psy14511        244 ISCVAWKPRTTDLAVTNTCTEYIDLWHE--QEERLIQKLRTHMHQVIAMCWN--GNLLSCGTIGGNILHYDVRTHSDYPT  319 (488)
Q Consensus       244 i~~~~~~~~~~~l~~~~~~~~~i~i~d~--~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~  319 (488)
                      .+++.+.-.  +..++ ...|.|....+  ..-..+.++.+|.+.+.+++|+  .+.+.+|..|..+.+||+--.+....
T Consensus       158 ~t~~~~d~~--~~fvG-d~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~  234 (404)
T KOG1409|consen  158 ASALQFDAL--YAFVG-DHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAY  234 (404)
T ss_pred             CCCCceeeE--EEEec-ccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceee
Confidence            000000000  22223 33333333322  2335667788999999999995  68899999999999999987666677


Q ss_pred             eeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCccccee---------------------------------
Q psy14511        320 AITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLI---------------------------------  365 (488)
Q Consensus       320 ~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~---------------------------------  365 (488)
                      .+.+|...|..+..-+--+.+.+++ ||.|.+||++......+--..                                 
T Consensus       235 el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn~~r~etpewl~s~~cQ~c~qpffwn~~~m~~~k~~glr~h~crk  314 (404)
T KOG1409|consen  235 ELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWNMNVKRVETPEWLDSDSCQKCNQPFFWNFRQMWDRKQLGLRQHHCRK  314 (404)
T ss_pred             eeccchhhhhhhhhhhhheeeeeccCCCeEEEEeccceeecCccccccchhhhhCchHHHHHHHHHhhhhhhhhhhhhhh
Confidence            7888999999888888788888887 699999999865332211000                                 


Q ss_pred             ----eeeecCCCCEEEEEccCCCCeEEEEeCCC-------cceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEec
Q psy14511        366 ----VPKLKREGRELVTSHGKQDCSLKMWEYPR-------LHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNC  434 (488)
Q Consensus       366 ----~~~~~~~~~~l~~~~g~~~~~i~i~d~~~-------~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~  434 (488)
                          ++--+.+.+..... -+.+-.+++.|.-.       ..++..+..-...|+.+.+..+-.+|+|++.|..|+|||+
T Consensus       315 cg~avc~~c~s~~~~~p~-mg~e~~vR~~~~c~~~i~~~~~t~LA~phei~tgItamhlqetlglLvTsG~~Rvi~iwd~  393 (404)
T KOG1409|consen  315 CGKAVCGKCSSNRSSYPT-MGFEFSVRVCDSCYPTIKDEERTPLAIPHEIKTGITAMHLQETLGLLVTSGTDRVIKIWDV  393 (404)
T ss_pred             hhhhcCcccccCcccccc-ccceeEEEEecccchhhhcCCCCccccccccccceeEEEhhhhccceeecCCceEEEEEec
Confidence                00001111111111 12233344444311       1234444333446999999888889999999999999998


Q ss_pred             CC
Q psy14511        435 FP  436 (488)
Q Consensus       435 ~~  436 (488)
                      .+
T Consensus       394 ~~  395 (404)
T KOG1409|consen  394 RS  395 (404)
T ss_pred             hh
Confidence            75

>KOG2314|consensus

Probab=99.54  E-value=2.7e-11  Score=106.13  Aligned_cols=294  Identities=16%  Similarity=0.199  Sum_probs=174.7

Q ss_pred             cCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec------C------CeEEEEeccccCcC
Q psy14511          3 WNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS------N------NTVKIWDFRQLDAK   70 (488)
Q Consensus         3 ~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~------d------~~i~vwd~~~~~~~   70 (488)
                      +-|.||++--..| |.+|--++-..++++  .|.+ |.-+.|||+.+||++-+      +      ..++|||+.+|...
T Consensus       220 P~GTYL~t~Hk~G-I~lWGG~~f~r~~RF--~Hp~-Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lk  295 (698)
T KOG2314|consen  220 PKGTYLVTFHKQG-IALWGGESFDRIQRF--YHPG-VQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLK  295 (698)
T ss_pred             CCceEEEEEeccc-eeeecCccHHHHHhc--cCCC-ceeeecCCccceEEEecCCccccCcccCCCceEEEEEccccchh
Confidence            3799999988777 889976665544433  4654 89999999999999965      1      58999999998776


Q ss_pred             CCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEee
Q psy14511         71 RPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHG  150 (488)
Q Consensus        71 ~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (488)
                      +....+......-.-..||.|+++++-..    -..|.|++..+..++..-...-..                       
T Consensus       296 rsF~~~~~~~~~WP~frWS~DdKy~Arm~----~~sisIyEtpsf~lld~Kslki~g-----------------------  348 (698)
T KOG2314|consen  296 RSFPVIKSPYLKWPIFRWSHDDKYFARMT----GNSISIYETPSFMLLDKKSLKISG-----------------------  348 (698)
T ss_pred             cceeccCCCccccceEEeccCCceeEEec----cceEEEEecCceeeecccccCCcc-----------------------
Confidence            65544332222223467999999877766    458999987653332111111111                       


Q ss_pred             eeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCC-cEEEEE------CCCeEEEE
Q psy14511        151 FEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYH-DTLAVA------LDTSVYTW  223 (488)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------~d~~v~iw  223 (488)
                                                                        +..+.|++. .+++--      .-.++.+.
T Consensus       349 --------------------------------------------------Ir~FswsP~~~llAYwtpe~~~~parvtL~  378 (698)
T KOG2314|consen  349 --------------------------------------------------IRDFSWSPTSNLLAYWTPETNNIPARVTLM  378 (698)
T ss_pred             --------------------------------------------------ccCcccCCCcceEEEEcccccCCcceEEEE
Confidence                                                              111333332 222211      11245555


Q ss_pred             ECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEe---------CCCCcEEEEECCcceeeeeeccccccEEEEEe--
Q psy14511        224 NTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTN---------TCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--  292 (488)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~---------~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--  292 (488)
                      .+.+++.++...+   +.-.-..+.|-.+|.+|++-.         +.-..+.|+.++........-.-...|..++|  
T Consensus       379 evPs~~~iRt~nl---fnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~velke~vi~FaWEP  455 (698)
T KOG2314|consen  379 EVPSKREIRTKNL---FNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEVVELKESVIAFAWEP  455 (698)
T ss_pred             ecCccceeeeccc---eeeeccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCCceeeecchheeeeeecc
Confidence            5555555544443   222223456777788877641         11123455555543322222234567788888  


Q ss_pred             cCCEEEEeec---CCeEEEEECcC-CCccceeeecCCccEEEEEEccCCcEEEEEe----cCeEEEEECCCCCCC--ccc
Q psy14511        293 NGNLLSCGTI---GGNILHYDVRT-HSDYPTAITREGDVVCGLKWSPNGRYLASGS----NNTVKIWDFRQLDAK--RPL  362 (488)
Q Consensus       293 ~~~~l~~~~~---dg~i~i~d~~~-~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~----d~~i~iwd~~~~~~~--~~~  362 (488)
                      .|+.+++-+.   ..++.+|.+++ ...+.....-.....+.+.|+|.|++++.+.    .|.+.++|+...+..  ...
T Consensus       456 ~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~dk~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~a~~k~~~~~  535 (698)
T KOG2314|consen  456 HGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELDKKFANTVFWSPKGRFVVVAALVSRRGDLEFYDTDYADLKDTASP  535 (698)
T ss_pred             CCCeEEEEEccccccceeEEEeecCCCchhhhhhhcccccceEEEcCCCcEEEEEEecccccceEEEecchhhhhhccCc
Confidence            4665555433   35788998874 2222222222224467899999999998876    289999999843221  111


Q ss_pred             ceee---eeecCCCCEEEEEc
Q psy14511        363 GLIV---PKLKREGRELVTSH  380 (488)
Q Consensus       363 ~~~~---~~~~~~~~~l~~~~  380 (488)
                      ..+.   ..|.|.|+++++++
T Consensus       536 eh~~at~veWDPtGRYvvT~s  556 (698)
T KOG2314|consen  536 EHFAATEVEWDPTGRYVVTSS  556 (698)
T ss_pred             cccccccceECCCCCEEEEee
Confidence            1111   29999999999953

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=99.54  E-value=8.5e-11  Score=102.30  Aligned_cols=271  Identities=10%  Similarity=-0.042  Sum_probs=161.1

Q ss_pred             ccCCceEEEeecC-----CeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-----------CCeEEEEecc
Q psy14511          2 CWNGNLLSCGTIG-----GNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-----------NNTVKIWDFR   65 (488)
Q Consensus         2 ~~dg~~la~g~~d-----g~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-----------d~~i~vwd~~   65 (488)
                      +||++++.+-...     ++|.+.|..+.+.+..+-.+....  .+ +||||+.|..+.           +..|.+||..
T Consensus         9 ~~~~~~v~V~d~~~~~~~~~v~ViD~~~~~v~g~i~~G~~P~--~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~   85 (352)
T TIGR02658         9 ASDARRVYVLDPGHFAATTQVYTIDGEAGRVLGMTDGGFLPN--PV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQ   85 (352)
T ss_pred             CCCCCEEEEECCcccccCceEEEEECCCCEEEEEEEccCCCc--ee-ECCCCCEEEEEeccccccccCCCCCEEEEEECc
Confidence            3566666655443     899999999988654444444332  24 999999776653           4899999999


Q ss_pred             ccCcCCCcccccc-c---ccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccc
Q psy14511         66 QLDAKRPQVNNQC-H---LSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKR  141 (488)
Q Consensus        66 ~~~~~~~~~~~~~-h---~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (488)
                      +.+....+..... +   ......++++|||++|++.... .+..+.+.|+.+++.+.++.....   ...         
T Consensus        86 t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~-p~~~V~VvD~~~~kvv~ei~vp~~---~~v---------  152 (352)
T TIGR02658        86 THLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFS-PSPAVGVVDLEGKAFVRMMDVPDC---YHI---------  152 (352)
T ss_pred             cCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCC-CCCEEEEEECCCCcEEEEEeCCCC---cEE---------
Confidence            8665544432111 1   2234478899999988876631 378999999999998887765311   000         


Q ss_pred             eeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEE
Q psy14511        142 RHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVY  221 (488)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~  221 (488)
                                                                                    ...++..+++-+.||...
T Consensus       153 --------------------------------------------------------------y~t~e~~~~~~~~Dg~~~  170 (352)
T TIGR02658       153 --------------------------------------------------------------FPTANDTFFMHCRDGSLA  170 (352)
T ss_pred             --------------------------------------------------------------EEecCCccEEEeecCceE
Confidence                                                                          111223344445555555


Q ss_pred             EEECCCCceEEEEecCCCC-------CCceEEEEEcC-CCCeEEEEeCCCCcEEEEECCcc-----eeeeeecc------
Q psy14511        222 TWNTKTNKTQLLVEYPTYD-------NAYISCVAWKP-RTTDLAVTNTCTEYIDLWHEQEE-----RLIQKLRT------  282 (488)
Q Consensus       222 iw~~~~~~~~~~~~~~~~~-------~~~i~~~~~~~-~~~~l~~~~~~~~~i~i~d~~~~-----~~~~~~~~------  282 (488)
                      ...+.+.........+-.+       ..+    .|.+ +++++.++ .. |.|.+.|+...     +....+..      
T Consensus       171 ~v~~d~~g~~~~~~~~vf~~~~~~v~~rP----~~~~~dg~~~~vs-~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~  244 (352)
T TIGR02658       171 KVGYGTKGNPKIKPTEVFHPEDEYLINHP----AYSNKSGRLVWPT-YT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADG  244 (352)
T ss_pred             EEEecCCCceEEeeeeeecCCccccccCC----ceEcCCCcEEEEe-cC-CeEEEEecCCCcceecceeeeccccccccc
Confidence            4443322111111110000       112    4455 88888887 44 99999996432     22222211      


Q ss_pred             -ccccEEEEEe--cCCEEEEee----------cCCeEEEEECcCCCccceeeecCCccEEEEEEccCCc-EEEEEe-c-C
Q psy14511        283 -HMHQVIAMCW--NGNLLSCGT----------IGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGR-YLASGS-N-N  346 (488)
Q Consensus       283 -~~~~v~~~~~--~~~~l~~~~----------~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~-d-~  346 (488)
                       ......-+++  +++.++...          ..+.|.++|..+.+.......+  ..+..++++||++ +|++.+ . +
T Consensus       245 wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~vG--~~~~~iavS~Dgkp~lyvtn~~s~  322 (352)
T TIGR02658       245 WRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIELG--HEIDSINVSQDAKPLLYALSTGDK  322 (352)
T ss_pred             cCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeCC--CceeeEEECCCCCeEEEEeCCCCC
Confidence             1122222555  677766632          2257999999886533333333  3588999999999 777665 2 7


Q ss_pred             eEEEEECCCCCC
Q psy14511        347 TVKIWDFRQLDA  358 (488)
Q Consensus       347 ~i~iwd~~~~~~  358 (488)
                      .|.++|..+.+.
T Consensus       323 ~VsViD~~t~k~  334 (352)
T TIGR02658       323 TLYIFDAETGKE  334 (352)
T ss_pred             cEEEEECcCCeE
Confidence            777777766543

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.50  E-value=7e-12  Score=116.69  Aligned_cols=228  Identities=15%  Similarity=0.135  Sum_probs=142.9

Q ss_pred             CeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCC--CcEEEEECCcceeeeeeccccccEEEEEe--c
Q psy14511        218 TSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCT--EYIDLWHEQEERLIQKLRTHMHQVIAMCW--N  293 (488)
Q Consensus       218 ~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~--~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~  293 (488)
                      ..|.++|........+..    +...+...+|+|+|++++.+...+  ..|++||+.+++... +..+.....++.|  |
T Consensus       170 ~~l~~~d~~g~~~~~l~~----~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~-~~~~~~~~~~~~~spD  244 (417)
T TIGR02800       170 YELQVADYDGANPQTITR----SREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREK-VASFPGMNGAPAFSPD  244 (417)
T ss_pred             ceEEEEcCCCCCCEEeec----CCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEE-eecCCCCccceEECCC
Confidence            468888886555444433    455688899999999999873322  479999998865433 2234444555667  7


Q ss_pred             CCEEE-EeecCC--eEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEec--C--eEEEEECCCCCCCcccce--
Q psy14511        294 GNLLS-CGTIGG--NILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN--N--TVKIWDFRQLDAKRPLGL--  364 (488)
Q Consensus       294 ~~~l~-~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d--~--~i~iwd~~~~~~~~~~~~--  364 (488)
                      ++.|+ +.+.++  .|++||+.++.  ...+..+........|+|||+.|+..++  +  .|.++|+.+.+.......  
T Consensus       245 g~~l~~~~~~~~~~~i~~~d~~~~~--~~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~~l~~~~~  322 (417)
T TIGR02800       245 GSKLAVSLSKDGNPDIYVMDLDGKQ--LTRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVRRLTFRGG  322 (417)
T ss_pred             CCEEEEEECCCCCccEEEEECCCCC--EEECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecCCC
Confidence            77665 444444  58888987643  3334444444556789999999887763  3  688888876543211111  


Q ss_pred             --eeeeecCCCCEEEEEccCC-CCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCC---cEEEEecCCCC
Q psy14511        365 --IVPKLKREGRELVTSHGKQ-DCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADE---TISIWNCFPRD  438 (488)
Q Consensus       365 --~~~~~~~~~~~l~~~~g~~-~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg---~v~iw~~~~~~  438 (488)
                        ....|+|+|++++.+.... ...|.+||+.++.. ..+... .......|+||+++|+..+.++   .+++.+.....
T Consensus       323 ~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~-~~l~~~-~~~~~p~~spdg~~l~~~~~~~~~~~l~~~~~~g~~  400 (417)
T TIGR02800       323 YNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGE-RVLTDT-GLDESPSFAPNGRMILYATTRGGRGVLGLVSTDGRF  400 (417)
T ss_pred             CccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCe-EEccCC-CCCCCceECCCCCEEEEEEeCCCcEEEEEEECCCce
Confidence              1238999999998853211 12789999987654 333322 2345678999999998877664   45565654433


Q ss_pred             ccccccccCCcceEEe
Q psy14511        439 KKRKARQVGSGSSLEF  454 (488)
Q Consensus       439 ~~~~~~~~~~v~~~~~  454 (488)
                      ........+.+..+.|
T Consensus       401 ~~~~~~~~g~~~~~~w  416 (417)
T TIGR02800       401 RARLPLGNGDVREPAW  416 (417)
T ss_pred             eeECCCCCCCcCCCCC
Confidence            3333333445555555

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>KOG0974|consensus

Probab=99.50  E-value=2.5e-11  Score=114.25  Aligned_cols=114  Identities=19%  Similarity=0.357  Sum_probs=92.8

Q ss_pred             ccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccc
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHL   80 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~   80 (488)
                      +++.-++++|+.-+.|.+|+..... .+..+.+|.+.|.++.|+-||+++++.+ |.++++|++++.+...  ....+|+
T Consensus       142 s~~~~~i~~gsv~~~iivW~~~~dn-~p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~--~~~fgHs  218 (967)
T KOG0974|consen  142 SAEELYIASGSVFGEIIVWKPHEDN-KPIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLG--CTGFGHS  218 (967)
T ss_pred             cCcEEEEEeccccccEEEEeccccC-CcceecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccC--ccccccc
Confidence            4566789999999999999998433 5557899999999999999999999999 9999999999866544  3467899


Q ss_pred             cceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecC
Q psy14511         81 SAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTD  124 (488)
Q Consensus        81 ~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~  124 (488)
                      ..|+.+.|.|+  .+++.+.   |.+.++|+.+ +..+..+..+
T Consensus       219 aRvw~~~~~~n--~i~t~ge---dctcrvW~~~-~~~l~~y~~h  256 (967)
T KOG0974|consen  219 ARVWACCFLPN--RIITVGE---DCTCRVWGVN-GTQLEVYDEH  256 (967)
T ss_pred             ceeEEEEeccc--eeEEecc---ceEEEEEecc-cceehhhhhh
Confidence            99999999998  6777776   9999999753 4443344333

>KOG1354|consensus

Probab=99.49  E-value=9.2e-12  Score=102.51  Aligned_cols=162  Identities=16%  Similarity=0.310  Sum_probs=110.5

Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCccce
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPT  319 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~  319 (488)
                      |...|+++.++.|+..++++  .|=.|.+|++.-.                            |+...|-|+....    
T Consensus       163 HtyhiNSIS~NsD~Et~lSA--DdLRINLWnlei~----------------------------d~sFnIVDIKP~n----  208 (433)
T KOG1354|consen  163 HTYHINSISVNSDKETFLSA--DDLRINLWNLEII----------------------------DQSFNIVDIKPAN----  208 (433)
T ss_pred             ceeEeeeeeecCccceEeec--cceeeeecccccc----------------------------CCceeEEEccccC----
Confidence            77888899999888888776  7778888887531                            3334455554311    


Q ss_pred             eeecCCccEEEEEEccCC-cEEEEEe-cCeEEEEECCCCCCCccc----------------ceee---e--eecCCCCEE
Q psy14511        320 AITREGDVVCGLKWSPNG-RYLASGS-NNTVKIWDFRQLDAKRPL----------------GLIV---P--KLKREGREL  376 (488)
Q Consensus       320 ~~~~~~~~i~~~~~s~~~-~~l~~~~-d~~i~iwd~~~~~~~~~~----------------~~~~---~--~~~~~~~~l  376 (488)
                       +..-..-|++..|+|.. .+++..+ .|+|++-|++........                ...+   .  .|+++|+++
T Consensus       209 -mEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryi  287 (433)
T KOG1354|consen  209 -MEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYI  287 (433)
T ss_pred             -HHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEE
Confidence             12223346777888854 3444444 499999998843221100                0001   1  899999999


Q ss_pred             EEEccCCCCeEEEEeC-CCcceeEEEeecc------------ccE---EEEEEcCCCCEEEEEeCCCcEEEEecCCCCc
Q psy14511        377 VTSHGKQDCSLKMWEY-PRLHLIEELKIHQ------------ERI---LSAVLSPDQTCVAAASADETISIWNCFPRDK  439 (488)
Q Consensus       377 ~~~~g~~~~~i~i~d~-~~~~~~~~~~~~~------------~~v---~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~  439 (488)
                      ++   .+=-+|++||+ ...+++.+++-|.            +.|   ..++|+-++.+++||+....++++++..+..
T Consensus       288 ls---RDyltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~~~v~TGsy~n~frvf~~~~gsk  363 (433)
T KOG1354|consen  288 LS---RDYLTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGNDSYVMTGSYNNVFRVFNLARGSK  363 (433)
T ss_pred             EE---eccceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCCcceEecccccceEEEecCCCCcc
Confidence            98   44578999999 5667777777663            222   3689999999999999999999999766544

>KOG0974|consensus

Probab=99.49  E-value=3.8e-12  Score=119.64  Aligned_cols=191  Identities=12%  Similarity=0.133  Sum_probs=147.2

Q ss_pred             eeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCC--ceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecc
Q psy14511        205 DWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNA--YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRT  282 (488)
Q Consensus       205 ~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~--~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~  282 (488)
                      .|...+++.++.++.+.+||...+.......... ..-  ...-+-++++.-+++++ +.-+.|.+|+....+....+.+
T Consensus        96 ~~e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~e-r~~l~~~~~~g~s~~~~~i~~g-sv~~~iivW~~~~dn~p~~l~G  173 (967)
T KOG0974|consen   96 FEENKKIALVTSRNSLLIRDSKNSSVLSKIQSDE-RCTLYSSLIIGDSAEELYIASG-SVFGEIIVWKPHEDNKPIRLKG  173 (967)
T ss_pred             hhhcceEEEEEcCceEEEEecccCceehhcCCCc-eEEEEeEEEEeccCcEEEEEec-cccccEEEEeccccCCcceecc
Confidence            3445678888999999999998776544433211 000  11123356666778888 8999999999875444446889


Q ss_pred             ccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCC
Q psy14511        283 HMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAK  359 (488)
Q Consensus       283 ~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~  359 (488)
                      |.+.+.++.+  ||+++++.++|..+++|++.+.+......-+|...++.+.|+|+  .+++++ |-+.++|+..     
T Consensus       174 HeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i~t~gedctcrvW~~~-----  246 (967)
T KOG0974|consen  174 HEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RIITVGEDCTCRVWGVN-----  246 (967)
T ss_pred             cCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccc--eeEEeccceEEEEEecc-----
Confidence            9999999999  89999999999999999999987666678899999999999998  788877 5778888543     


Q ss_pred             cccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccc-cEEEEEEcCCCCEEEEEeCCCcEEEEecCCCC
Q psy14511        360 RPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQE-RILSAVLSPDQTCVAAASADETISIWNCFPRD  438 (488)
Q Consensus       360 ~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~  438 (488)
                                                         ++.+..+.+|.. .|+.++..++...++|++.||.+++|++....
T Consensus       247 -----------------------------------~~~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~r~  291 (967)
T KOG0974|consen  247 -----------------------------------GTQLEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNGRG  291 (967)
T ss_pred             -----------------------------------cceehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhhhhccc
Confidence                                               223335566643 69999999999999999999999999987654


Q ss_pred             c
Q psy14511        439 K  439 (488)
Q Consensus       439 ~  439 (488)
                      .
T Consensus       292 ~  292 (967)
T KOG0974|consen  292 L  292 (967)
T ss_pred             c
Confidence            3

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.48  E-value=3.5e-11  Score=112.01  Aligned_cols=235  Identities=13%  Similarity=0.157  Sum_probs=139.0

Q ss_pred             eEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec--C--CeEEEEeccccCcCCCcccccccccceeEEEEecC
Q psy14511         16 NILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--N--NTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPW   91 (488)
Q Consensus        16 ~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~--d--~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~   91 (488)
                      .|.++|...+. . +.+..+...+...+|||||+.|+..+  +  ..|.+||+.+++.. .+..   ..+.+....|+||
T Consensus       180 ~l~~~d~~g~~-~-~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~-~l~~---~~g~~~~~~~SpD  253 (430)
T PRK00178        180 TLQRSDYDGAR-A-VTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRRE-QITN---FEGLNGAPAWSPD  253 (430)
T ss_pred             EEEEECCCCCC-c-eEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEE-EccC---CCCCcCCeEECCC
Confidence            47777877554 2 44566777899999999999998876  2  47999999876533 2222   2234557899999


Q ss_pred             CCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceee
Q psy14511         92 EPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQF  171 (488)
Q Consensus        92 ~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (488)
                      |+.++.+.....+..|.+||+.+++... +........                                          
T Consensus       254 G~~la~~~~~~g~~~Iy~~d~~~~~~~~-lt~~~~~~~------------------------------------------  290 (430)
T PRK00178        254 GSKLAFVLSKDGNPEIYVMDLASRQLSR-VTNHPAIDT------------------------------------------  290 (430)
T ss_pred             CCEEEEEEccCCCceEEEEECCCCCeEE-cccCCCCcC------------------------------------------
Confidence            9988866543113368888987765322 211100000                                          


Q ss_pred             ecccccccccccCCCceeecCCCccccceeeeeeeC--CCcEEEEE-C--CCeEEEEECCCCceEEEEecCCCCCCceEE
Q psy14511        172 LRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG--YHDTLAVA-L--DTSVYTWNTKTNKTQLLVEYPTYDNAYISC  246 (488)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~--d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~  246 (488)
                                                     ...|+  +..++..+ .  ...|+++++.+++..... .   .......
T Consensus       291 -------------------------------~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt-~---~~~~~~~  335 (430)
T PRK00178        291 -------------------------------EPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERVT-F---VGNYNAR  335 (430)
T ss_pred             -------------------------------CeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEee-c---CCCCccc
Confidence                                           01222  22344333 2  236888888887754443 2   1223345


Q ss_pred             EEEcCCCCeEEEEeCCCC--cEEEEECCcceeeeeeccccccEEEEEecCCEEEEeecC---CeEEEEECcCCCccceee
Q psy14511        247 VAWKPRTTDLAVTNTCTE--YIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIG---GNILHYDVRTHSDYPTAI  321 (488)
Q Consensus       247 ~~~~~~~~~l~~~~~~~~--~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~  321 (488)
                      ..|+|+|+.++.....++  .|.++|+.+++...........-..++.||+.++..+.+   ..++++++..  .....+
T Consensus       336 ~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~~lt~~~~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~~g--~~~~~l  413 (430)
T PRK00178        336 PRLSADGKTLVMVHRQDGNFHVAAQDLQRGSVRILTDTSLDESPSVAPNGTMLIYATRQQGRGVLMLVSING--RVRLPL  413 (430)
T ss_pred             eEECCCCCEEEEEEccCCceEEEEEECCCCCEEEccCCCCCCCceECCCCCEEEEEEecCCceEEEEEECCC--CceEEC
Confidence            789999999988833343  577889887654322222111112344488888776654   3466667653  233344


Q ss_pred             ecCCccEEEEEEccC
Q psy14511        322 TREGDVVCGLKWSPN  336 (488)
Q Consensus       322 ~~~~~~i~~~~~s~~  336 (488)
                      ..+.+.+...+|+|-
T Consensus       414 ~~~~g~~~~p~ws~~  428 (430)
T PRK00178        414 PTAQGEVREPSWSPY  428 (430)
T ss_pred             cCCCCCcCCCccCCC
Confidence            444555667777763

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.48  E-value=2.3e-11  Score=112.68  Aligned_cols=166  Identities=17%  Similarity=0.206  Sum_probs=106.0

Q ss_pred             EEEEEcCCCCeEEEEeCCCCc--EEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeec-CC--eEEEEECcCCCcc
Q psy14511        245 SCVAWKPRTTDLAVTNTCTEY--IDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTI-GG--NILHYDVRTHSDY  317 (488)
Q Consensus       245 ~~~~~~~~~~~l~~~~~~~~~--i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~-dg--~i~i~d~~~~~~~  317 (488)
                      ...+|+|||+.|+.....++.  |.++|+.+++. ..+..+.......+|  |++.++..+. ++  .|+++|+.+++  
T Consensus       265 ~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~-~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~--  341 (448)
T PRK04792        265 GAPRFSPDGKKLALVLSKDGQPEIYVVDIATKAL-TRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGK--  341 (448)
T ss_pred             CCeeECCCCCEEEEEEeCCCCeEEEEEECCCCCe-EECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCC--
Confidence            357899999988876466665  77778877654 344444444455666  7877766553 33  56677776653  


Q ss_pred             ceeeecCCccEEEEEEccCCcEEEEEe-c-C--eEEEEECCCCCCCcccce---eeeeecCCCCEEEEEccCCCC--eEE
Q psy14511        318 PTAITREGDVVCGLKWSPNGRYLASGS-N-N--TVKIWDFRQLDAKRPLGL---IVPKLKREGRELVTSHGKQDC--SLK  388 (488)
Q Consensus       318 ~~~~~~~~~~i~~~~~s~~~~~l~~~~-d-~--~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~l~~~~g~~~~--~i~  388 (488)
                      ...+..........+|+|||++|+..+ + +  .|.++|+.+++.......   ....|+|+|+.++.++. .++  .++
T Consensus       342 ~~~Lt~~g~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~~~lt~~~~d~~ps~spdG~~I~~~~~-~~g~~~l~  420 (448)
T PRK04792        342 VSRLTFEGEQNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAMQVLTSTRLDESPSVAPNGTMVIYSTT-YQGKQVLA  420 (448)
T ss_pred             EEEEecCCCCCcCeeECCCCCEEEEEEecCCceEEEEEECCCCCeEEccCCCCCCCceECCCCCEEEEEEe-cCCceEEE
Confidence            222222222234578999999998876 3 4  466678776643221111   12389999999988643 333  477


Q ss_pred             EEeCCCcceeEEEeeccccEEEEEEcC
Q psy14511        389 MWEYPRLHLIEELKIHQERILSAVLSP  415 (488)
Q Consensus       389 i~d~~~~~~~~~~~~~~~~v~~~~~s~  415 (488)
                      +++. +++....+..+.+.+...+|+|
T Consensus       421 ~~~~-~G~~~~~l~~~~g~~~~p~Wsp  446 (448)
T PRK04792        421 AVSI-DGRFKARLPAGQGEVKSPAWSP  446 (448)
T ss_pred             EEEC-CCCceEECcCCCCCcCCCccCC
Confidence            7786 5666677776667788889987

>PRK01029 tolB translocation protein TolB; Provisional

Probab=99.47  E-value=7.6e-11  Score=108.27  Aligned_cols=99  Identities=14%  Similarity=0.195  Sum_probs=63.0

Q ss_pred             eEEEEEcCCCCeEEEEeCCCCcEEEEE--CCc-ceeeeeeccccccEEEEEe--cCCEEEEeecC---CeEEEEECcCCC
Q psy14511        244 ISCVAWKPRTTDLAVTNTCTEYIDLWH--EQE-ERLIQKLRTHMHQVIAMCW--NGNLLSCGTIG---GNILHYDVRTHS  315 (488)
Q Consensus       244 i~~~~~~~~~~~l~~~~~~~~~i~i~d--~~~-~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d---g~i~i~d~~~~~  315 (488)
                      ....+|+|||+.|+..+..+|...+|.  +.. +.....+..+...+....|  ||+.|+..+.+   ..|++||+.+++
T Consensus       283 ~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~  362 (428)
T PRK01029        283 QGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGR  362 (428)
T ss_pred             cCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCC
Confidence            345789999998888745567555554  432 2233444444445555666  78888776543   468999998764


Q ss_pred             ccceeeecCCccEEEEEEccCCcEEEEEe
Q psy14511        316 DYPTAITREGDVVCGLKWSPNGRYLASGS  344 (488)
Q Consensus       316 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~  344 (488)
                      .  ..+......+....|+|||++|+...
T Consensus       363 ~--~~Lt~~~~~~~~p~wSpDG~~L~f~~  389 (428)
T PRK01029        363 D--YQLTTSPENKESPSWAIDSLHLVYSA  389 (428)
T ss_pred             e--EEccCCCCCccceEECCCCCEEEEEE
Confidence            2  33333333466788999998887554

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.47  E-value=3.1e-11  Score=112.35  Aligned_cols=211  Identities=14%  Similarity=0.155  Sum_probs=128.6

Q ss_pred             eEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec----CCeEEEEeccccCcCCCcccccccccceeEEEEecC
Q psy14511         16 NILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS----NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPW   91 (488)
Q Consensus        16 ~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~----d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~   91 (488)
                      .|.++|.....  .+.+..+...+...+|+|||++||.+.    ...|++||+.+++...    +..+.+.+.+++|+||
T Consensus       171 ~l~~~d~~g~~--~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~----~~~~~~~~~~~~~spD  244 (417)
T TIGR02800       171 ELQVADYDGAN--PQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREK----VASFPGMNGAPAFSPD  244 (417)
T ss_pred             eEEEEcCCCCC--CEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEE----eecCCCCccceEECCC
Confidence            68888876443  244566777899999999999999876    2589999998754321    2234456677899999


Q ss_pred             CCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceee
Q psy14511         92 EPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQF  171 (488)
Q Consensus        92 ~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (488)
                      ++.++.+.....+..|.+|++.++..... .........                                         
T Consensus       245 g~~l~~~~~~~~~~~i~~~d~~~~~~~~l-~~~~~~~~~-----------------------------------------  282 (417)
T TIGR02800       245 GSKLAVSLSKDGNPDIYVMDLDGKQLTRL-TNGPGIDTE-----------------------------------------  282 (417)
T ss_pred             CCEEEEEECCCCCccEEEEECCCCCEEEC-CCCCCCCCC-----------------------------------------
Confidence            99887765431234688888877653221 111000000                                         


Q ss_pred             ecccccccccccCCCceeecCCCccccceeeeeee--CCCcEEEEEC-C--CeEEEEECCCCceEEEEecCCCCCCceEE
Q psy14511        172 LRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDW--GYHDTLAVAL-D--TSVYTWNTKTNKTQLLVEYPTYDNAYISC  246 (488)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-d--~~v~iw~~~~~~~~~~~~~~~~~~~~i~~  246 (488)
                                                      ..|  ++..++..+. +  ..|+++++.+++...+..    +......
T Consensus       283 --------------------------------~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~~l~~----~~~~~~~  326 (417)
T TIGR02800       283 --------------------------------PSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVRRLTF----RGGYNAS  326 (417)
T ss_pred             --------------------------------EEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeec----CCCCccC
Confidence                                            111  1233444432 2  368888888776543332    3445677


Q ss_pred             EEEcCCCCeEEEEeCCCC---cEEEEECCcceeeeeeccccc-cEEEEEecCCEEEEeecCC---eEEEEECc
Q psy14511        247 VAWKPRTTDLAVTNTCTE---YIDLWHEQEERLIQKLRTHMH-QVIAMCWNGNLLSCGTIGG---NILHYDVR  312 (488)
Q Consensus       247 ~~~~~~~~~l~~~~~~~~---~i~i~d~~~~~~~~~~~~~~~-~v~~~~~~~~~l~~~~~dg---~i~i~d~~  312 (488)
                      +.|+|++++++.+ ..++   .|.+||+.++.. ..+..... .-..++.+++.|+..+.++   .+++.+..
T Consensus       327 ~~~spdg~~i~~~-~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~p~~spdg~~l~~~~~~~~~~~l~~~~~~  397 (417)
T TIGR02800       327 PSWSPDGDLIAFV-HREGGGFNIAVMDLDGGGE-RVLTDTGLDESPSFAPNGRMILYATTRGGRGVLGLVSTD  397 (417)
T ss_pred             eEECCCCCEEEEE-EccCCceEEEEEeCCCCCe-EEccCCCCCCCceECCCCCEEEEEEeCCCcEEEEEEECC
Confidence            8999999999988 5554   788889877543 22322111 1113334788887776654   35555543

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=99.46  E-value=1e-09  Score=91.80  Aligned_cols=246  Identities=14%  Similarity=0.207  Sum_probs=163.9

Q ss_pred             CCeEEEEECCCCce-EEEEecCCCCCCceEEEEEcCCCCeEEEEeCC--CCcEEEEECCc--ceee--eeeccccccEEE
Q psy14511        217 DTSVYTWNTKTNKT-QLLVEYPTYDNAYISCVAWKPRTTDLAVTNTC--TEYIDLWHEQE--ERLI--QKLRTHMHQVIA  289 (488)
Q Consensus       217 d~~v~iw~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~--~~~i~i~d~~~--~~~~--~~~~~~~~~v~~  289 (488)
                      +..|++|++.+..- ....+.-. ....++-++|+|+.+.|.++...  +|.|.-|.++.  |+..  ........+-+.
T Consensus        15 s~gI~v~~ld~~~g~l~~~~~v~-~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~y   93 (346)
T COG2706          15 SQGIYVFNLDTKTGELSLLQLVA-ELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCY   93 (346)
T ss_pred             CCceEEEEEeCcccccchhhhcc-ccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeE
Confidence            67899999884332 12222222 66778899999999999988444  67888887764  3332  222222223355


Q ss_pred             EEe--cCCEEEEeec-CCeEEEEECcCCCccc--eeeecCCcc----------EEEEEEccCCcEEEEEe-c-CeEEEEE
Q psy14511        290 MCW--NGNLLSCGTI-GGNILHYDVRTHSDYP--TAITREGDV----------VCGLKWSPNGRYLASGS-N-NTVKIWD  352 (488)
Q Consensus       290 ~~~--~~~~l~~~~~-dg~i~i~d~~~~~~~~--~~~~~~~~~----------i~~~~~s~~~~~l~~~~-d-~~i~iwd  352 (488)
                      ++.  ++++++++.. .|.|.++-++....+.  .....|.+.          +....+.|++++|+++. . ..|.+|+
T Consensus        94 vsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~  173 (346)
T COG2706          94 VSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYD  173 (346)
T ss_pred             EEECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEE
Confidence            555  6888888765 4889999997644222  123333333          77889999999999998 4 8999999


Q ss_pred             CCCCCCCcccceee--------eeecCCCCEEEEEccCCCCeEEEEeCCCc-ceeEEEeec---------cccEEEEEEc
Q psy14511        353 FRQLDAKRPLGLIV--------PKLKREGRELVTSHGKQDCSLKMWEYPRL-HLIEELKIH---------QERILSAVLS  414 (488)
Q Consensus       353 ~~~~~~~~~~~~~~--------~~~~~~~~~l~~~~g~~~~~i~i~d~~~~-~~~~~~~~~---------~~~v~~~~~s  414 (488)
                      +..+.........+        ..|+|++++..+. ..-+++|.+|..... ..+..++.+         .....++..+
T Consensus       174 ~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v-~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis  252 (346)
T COG2706         174 LDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLV-NELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHIS  252 (346)
T ss_pred             cccCccccccccccCCCCCcceEEEcCCCcEEEEE-eccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEEC
Confidence            99765433322221        2999999999887 578999999998763 233333322         2357789999


Q ss_pred             CCCCEEEEEeC-CCcEEEEecCCCCc-cc----cccccCCcceEEeecCCCceEEE
Q psy14511        415 PDQTCVAAASA-DETISIWNCFPRDK-KR----KARQVGSGSSLEFAILKQPVSLT  464 (488)
Q Consensus       415 ~~~~~l~t~~~-dg~v~iw~~~~~~~-~~----~~~~~~~v~~~~~s~~~~~~~~~  464 (488)
                      |||++|.++.. ...|.++.+..... +.    ...+........|.++++.+...
T Consensus       253 ~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa  308 (346)
T COG2706         253 PDGRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAA  308 (346)
T ss_pred             CCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCCCEEEEE
Confidence            99999988753 34788888875432 22    12233336788899988887553

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=99.44  E-value=2.5e-10  Score=104.41  Aligned_cols=291  Identities=13%  Similarity=0.022  Sum_probs=174.2

Q ss_pred             CcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCC
Q psy14511         48 GRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQ  126 (488)
Q Consensus        48 g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~  126 (488)
                      +..+..++ ++.|..+|..+++..-..........   ...  .++..+++.+.   ++.+..+|..+|+.+........
T Consensus        65 ~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~~~~~---~p~--v~~~~v~v~~~---~g~l~ald~~tG~~~W~~~~~~~  136 (377)
T TIGR03300        65 GGKVYAADADGTVVALDAETGKRLWRVDLDERLSG---GVG--ADGGLVFVGTE---KGEVIALDAEDGKELWRAKLSSE  136 (377)
T ss_pred             CCEEEEECCCCeEEEEEccCCcEeeeecCCCCccc---ceE--EcCCEEEEEcC---CCEEEEEECCCCcEeeeeccCce
Confidence            44555565 89999999888764332211111111   122  23556666665   99999999999987655432210


Q ss_pred             ccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeee
Q psy14511        127 QANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDW  206 (488)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (488)
                      ..                                                                         .....
T Consensus       137 ~~-------------------------------------------------------------------------~~p~v  143 (377)
T TIGR03300       137 VL-------------------------------------------------------------------------SPPLV  143 (377)
T ss_pred             ee-------------------------------------------------------------------------cCCEE
Confidence            00                                                                         00001


Q ss_pred             CCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCC---ceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccc
Q psy14511        207 GYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNA---YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTH  283 (488)
Q Consensus       207 ~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~---~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~  283 (488)
                      .++.+++++.++.++.||.++++.+-...... ...   ...+.... + ..++++ ..++.+..+|.++++.+......
T Consensus       144 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~-~~~~~~~~~sp~~~-~-~~v~~~-~~~g~v~ald~~tG~~~W~~~~~  219 (377)
T TIGR03300       144 ANGLVVVRTNDGRLTALDAATGERLWTYSRVT-PALTLRGSASPVIA-D-GGVLVG-FAGGKLVALDLQTGQPLWEQRVA  219 (377)
T ss_pred             ECCEEEEECCCCeEEEEEcCCCceeeEEccCC-CceeecCCCCCEEE-C-CEEEEE-CCCCEEEEEEccCCCEeeeeccc
Confidence            23567777789999999999998766554422 100   00111121 2 366666 78899999999988766543211


Q ss_pred             cc----------cE-EEEEecCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEE
Q psy14511        284 MH----------QV-IAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIW  351 (488)
Q Consensus       284 ~~----------~v-~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iw  351 (488)
                      ..          .+ ......+..+++++.+|.++.+|..+++... ... ... ...+.  .++..++.++ +|.+..+
T Consensus       220 ~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~tG~~~W-~~~-~~~-~~~p~--~~~~~vyv~~~~G~l~~~  294 (377)
T TIGR03300       220 LPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVAALDLRSGRVLW-KRD-ASS-YQGPA--VDDNRLYVTDADGVVVAL  294 (377)
T ss_pred             cCCCCCchhhhhccCCccEEECCEEEEEEcCCEEEEEECCCCcEEE-eec-cCC-ccCce--EeCCEEEEECCCCeEEEE
Confidence            00          01 1122356788888899999999998865322 211 111 11222  2345566555 6999999


Q ss_pred             ECCCCCCCccccee----eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEE-EEEEcCCCCEEEEEeCC
Q psy14511        352 DFRQLDAKRPLGLI----VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERIL-SAVLSPDQTCVAAASAD  426 (488)
Q Consensus       352 d~~~~~~~~~~~~~----~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~t~~~d  426 (488)
                      |..+++..-.....    .......+..+++  ++.+|.++++|..+++.+.++..+...+. +..+ .+ +.|+.++.|
T Consensus       295 d~~tG~~~W~~~~~~~~~~ssp~i~g~~l~~--~~~~G~l~~~d~~tG~~~~~~~~~~~~~~~sp~~-~~-~~l~v~~~d  370 (377)
T TIGR03300       295 DRRSGSELWKNDELKYRQLTAPAVVGGYLVV--GDFEGYLHWLSREDGSFVARLKTDGSGIASPPVV-VG-DGLLVQTRD  370 (377)
T ss_pred             ECCCCcEEEccccccCCccccCEEECCEEEE--EeCCCEEEEEECCCCCEEEEEEcCCCccccCCEE-EC-CEEEEEeCC
Confidence            99887543222111    1111224667777  68899999999999999988886664433 2233 23 358888999


Q ss_pred             CcEEEE
Q psy14511        427 ETISIW  432 (488)
Q Consensus       427 g~v~iw  432 (488)
                      |.|+.+
T Consensus       371 G~l~~~  376 (377)
T TIGR03300       371 GDLYAF  376 (377)
T ss_pred             ceEEEe
Confidence            998765

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>KOG0280|consensus

Probab=99.44  E-value=1.4e-10  Score=93.64  Aligned_cols=195  Identities=15%  Similarity=0.160  Sum_probs=130.9

Q ss_pred             CcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCc-ceeeee-ecccccc
Q psy14511        209 HDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE-ERLIQK-LRTHMHQ  286 (488)
Q Consensus       209 ~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~-~~~~~~-~~~~~~~  286 (488)
                      .++++.-.+|.+.+-+............+. |.-++....|+.....++.+|+.|+.+..||++. ++.+.. .+-|...
T Consensus       134 ~~i~vs~s~G~~~~v~~t~~~le~vq~wk~-He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~G  212 (339)
T KOG0280|consen  134 TKIFVSDSRGSISGVYETEMVLEKVQTWKV-HEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSG  212 (339)
T ss_pred             ceEEEEcCCCcEEEEecceeeeeecccccc-cceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecceeeecc
Confidence            456666678888866665555555444555 8889999999887766666669999999999983 333333 4568888


Q ss_pred             EEEEEe---cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCc--EEEEEecCeEEEEECCCCCCCcc
Q psy14511        287 VIAMCW---NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGR--YLASGSNNTVKIWDFRQLDAKRP  361 (488)
Q Consensus       287 v~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~--~l~~~~d~~i~iwd~~~~~~~~~  361 (488)
                      |.++.-   .+.++++|+.|..|++||.++..+++..-.. .+.|+.+.++|.-.  .|+++--+-.+|-+......   
T Consensus       213 V~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~~v-~GGVWRi~~~p~~~~~lL~~CMh~G~ki~~~~~~~~---  288 (339)
T KOG0280|consen  213 VVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKAKV-GGGVWRIKHHPEIFHRLLAACMHNGAKILDSSDKVL---  288 (339)
T ss_pred             eEEEecCCCCCceEEEeccccceeeeehhcccCccccCcc-ccceEEEEecchhhhHHHHHHHhcCceEEEeccccc---
Confidence            888887   4679999999999999999976655543332 36799999999543  44444445556665553310   


Q ss_pred             cceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEe-CCCcEE-EEecCCCCc
Q psy14511        362 LGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAAS-ADETIS-IWNCFPRDK  439 (488)
Q Consensus       362 ~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~-~dg~v~-iw~~~~~~~  439 (488)
                                            +     +    .......+.|.+-...-.|.....+|||++ .|..++ +|-..++++
T Consensus       289 ----------------------e-----~----~~~~~s~~~hdSl~YG~DWd~~~~~lATCsFYDk~~~~~Wl~~t~~~  337 (339)
T KOG0280|consen  289 ----------------------E-----F----QIVLPSDKIHDSLCYGGDWDSKDSFLATCSFYDKKIRQLWLHITGEP  337 (339)
T ss_pred             ----------------------c-----h----heeeeccccccceeeccccccccceeeeeeccccceeeeeeeccCCc
Confidence                                  0     0    012234455666666677755556788876 677755 776665543

>KOG4547|consensus

Probab=99.43  E-value=4.9e-11  Score=105.54  Aligned_cols=205  Identities=15%  Similarity=0.141  Sum_probs=154.2

Q ss_pred             cEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEc------C--------------CCCeEEEEeCCCCcEEEE
Q psy14511        210 DTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWK------P--------------RTTDLAVTNTCTEYIDLW  269 (488)
Q Consensus       210 ~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~------~--------------~~~~l~~~~~~~~~i~i~  269 (488)
                      .++....||.+++|+...++....+.....-.+..++..|.      |              +-..++.| ...|.|.+|
T Consensus         7 ~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlg-t~~g~v~~y   85 (541)
T KOG4547|consen    7 YFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLG-TPQGSVLLY   85 (541)
T ss_pred             eEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEee-cCCccEEEE
Confidence            45555699999999999998766554322133444444442      2              22245556 899999999


Q ss_pred             ECCcceeeeeec--cccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEec
Q psy14511        270 HEQEERLIQKLR--THMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN  345 (488)
Q Consensus       270 d~~~~~~~~~~~--~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d  345 (488)
                      +...++....+.  .|.+.|.++.+  +-..|.+++.|+.+..|+.... ...+........+.+++.+|||+.++++  
T Consensus        86 s~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~-~~~~~~~~~~~~~~sl~is~D~~~l~~a--  162 (541)
T KOG4547|consen   86 SVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEK-VIIRIWKEQKPLVSSLCISPDGKILLTA--  162 (541)
T ss_pred             EecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccc-eeeeeeccCCCccceEEEcCCCCEEEec--
Confidence            999998887775  58999999998  4678999999999999999875 4666777777778899999999888876  


Q ss_pred             CeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCC-----CCEE
Q psy14511        346 NTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPD-----QTCV  420 (488)
Q Consensus       346 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~-----~~~l  420 (488)
                                                            .++|++||+++++.+..+.+|.++|.+++|..+     |.++
T Consensus       163 --------------------------------------s~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~v  204 (541)
T KOG4547|consen  163 --------------------------------------SRQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYV  204 (541)
T ss_pred             --------------------------------------cceEEEEEccCceEEEEecCCCcceEEEEEEEecccccccee
Confidence                                                  356888888888999999999999999999887     6665


Q ss_pred             EE-EeCCCcEEEEecCCCCccccccccCCcceEEeec
Q psy14511        421 AA-ASADETISIWNCFPRDKKRKARQVGSGSSLEFAI  456 (488)
Q Consensus       421 ~t-~~~dg~v~iw~~~~~~~~~~~~~~~~v~~~~~s~  456 (488)
                      .+ ...+..+.+|-+......+...+...+.++...-
T Consensus       205 Lssa~~~r~i~~w~v~~~~kkks~~~sl~~~dipv~~  241 (541)
T KOG4547|consen  205 LSSAAAERGITVWVVEKEDKKKSLSCSLTVPDIPVTS  241 (541)
T ss_pred             eeccccccceeEEEEEcccccchhheeeccCCCCeEe
Confidence            55 4566778899888755555555555555444433

>KOG0309|consensus

Probab=99.42  E-value=1.5e-12  Score=117.71  Aligned_cols=284  Identities=17%  Similarity=0.255  Sum_probs=199.3

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccceeecccCc--eEEEEEEccCC---cEEEEecCCeEEEEeccccCcCCCcccccc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGD--VVCGLKWSPNG---RYLASGSNNTVKIWDFRQLDAKRPQVNNQC   78 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~--~V~~l~~sp~g---~~las~~d~~i~vwd~~~~~~~~~~~~~~~   78 (488)
                      .|+-+|.++.-| +.+-|+......+..+ .|..  .|-.+.|+|..   .++++-+...-.+|++........-..+.+
T Consensus        35 ~grdi~lAsr~g-l~i~dld~p~~ppr~l-~h~tpw~vad~qws~h~a~~~wiVsts~qkaiiwnlA~ss~~aIef~lhg  112 (1081)
T KOG0309|consen   35 SGRDIVLASRQG-LYIIDLDDPFTPPRWL-HHITPWQVADVQWSPHPAKPYWIVSTSNQKAIIWNLAKSSSNAIEFVLHG  112 (1081)
T ss_pred             ccchhhhhhhcC-eEEEeccCCCCCceee-eccCcchhcceecccCCCCceeEEecCcchhhhhhhhcCCccceEEEEec
Confidence            456667777666 5567777655443433 3332  47778898853   356666777778999976554555555789


Q ss_pred             cccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccce
Q psy14511         79 HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKV  158 (488)
Q Consensus        79 h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (488)
                      |...|+.+-|.|+.+-++++++.  |-.+..||+++...                                         
T Consensus       113 hsraitd~n~~~q~pdVlatcsv--dt~vh~wd~rSp~~-----------------------------------------  149 (1081)
T KOG0309|consen  113 HSRAITDINFNPQHPDVLATCSV--DTYVHAWDMRSPHR-----------------------------------------  149 (1081)
T ss_pred             CccceeccccCCCCCcceeeccc--cccceeeeccCCCc-----------------------------------------
Confidence            99999999999999999999885  99999999875431                                         


Q ss_pred             eccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCC
Q psy14511        159 LNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPT  238 (488)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~  238 (488)
                                                                                  -++.|+.             
T Consensus       150 ------------------------------------------------------------p~ys~~~-------------  156 (1081)
T KOG0309|consen  150 ------------------------------------------------------------PFYSTSS-------------  156 (1081)
T ss_pred             ------------------------------------------------------------ceeeeec-------------
Confidence                                                                        1111111             


Q ss_pred             CCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcc-eeeeeeccccccEEEEEec---CCEEEEeecCCeEEEEECcCC
Q psy14511        239 YDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEE-RLIQKLRTHMHQVIAMCWN---GNLLSCGTIGGNILHYDVRTH  314 (488)
Q Consensus       239 ~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~---~~~l~~~~~dg~i~i~d~~~~  314 (488)
                       -......++|+-....+++. +....|.+||.+.+ .++..+++|...+..+.|+   -..+.+.+.||++++||..+.
T Consensus       157 -w~s~asqVkwnyk~p~vlas-shg~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kS  234 (1081)
T KOG0309|consen  157 -WRSAASQVKWNYKDPNVLAS-SHGNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKS  234 (1081)
T ss_pred             -ccccCceeeecccCcchhhh-ccCCceEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeeccccc
Confidence             22234457777666666666 78889999999875 5677788898999999884   567889999999999999876


Q ss_pred             CccceeeecCCccEEEEEEccCCcEEEEEe---cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEe
Q psy14511        315 SDYPTAITREGDVVCGLKWSPNGRYLASGS---NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWE  391 (488)
Q Consensus       315 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d  391 (488)
                      .+........+.+|+.-.+-|-|+-...--   +..+.+++.++.                              ...|+
T Consensus       235 t~e~~~~vtt~~piw~~r~~Pfg~g~~~mp~~G~n~v~~~~c~n~------------------------------d~e~n  284 (1081)
T KOG0309|consen  235 TTESKRTVTTNFPIWRGRYLPFGEGYCIMPMVGGNMVPQLRCENS------------------------------DLEWN  284 (1081)
T ss_pred             ccccceeccccCcceeccccccCceeEeccccCCeeeeeccccch------------------------------hhhhc
Confidence            655555666677788888888665333221   244445544432                              23344


Q ss_pred             CCC-cceeEEEeeccccEEEEEEcCCCC----------EEEEEeCCCcEEEEecCCC
Q psy14511        392 YPR-LHLIEELKIHQERILSAVLSPDQT----------CVAAASADETISIWNCFPR  437 (488)
Q Consensus       392 ~~~-~~~~~~~~~~~~~v~~~~~s~~~~----------~l~t~~~dg~v~iw~~~~~  437 (488)
                      ..+ .+++.++.||.+.|....|-..+.          .|+|-|.|..+++|.+.+.
T Consensus       285 ~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQLVTWSkD~~lrlWpI~~~  341 (1081)
T KOG0309|consen  285 VFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSRDFQLVTWSKDQTLRLWPIDSQ  341 (1081)
T ss_pred             cccCCcceeeecCcchHHHHHhhhhcccccCCCCccceeEEEeecCCceEeeeccHH
Confidence            433 367899999999888777754222          7999999999999998753

>KOG1912|consensus

Probab=99.42  E-value=3.6e-10  Score=103.33  Aligned_cols=349  Identities=14%  Similarity=0.165  Sum_probs=226.1

Q ss_pred             EEEEEEccCCcEEEEecCCeEEEEeccccCcCCCcccccccccceeEEEEecC-----------CCeEEeeeCCcccceE
Q psy14511         39 VCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPW-----------EPTLLATGGGICDQTV  107 (488)
Q Consensus        39 V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~-----------~~~l~~~~~~~~d~~i  107 (488)
                      -.++.|+|.| +||.|+...|.|-|..+   .+.+..+.-|...|+.+.|.|-           ...+++++.  ..|.|
T Consensus        18 ~~A~Dw~~~G-LiAygshslV~VVDs~s---~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD--~~GrI   91 (1062)
T KOG1912|consen   18 RNAADWSPSG-LIAYGSHSLVSVVDSRS---LQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASAD--ISGRI   91 (1062)
T ss_pred             ccccccCccc-eEEEecCceEEEEehhh---hhhhhccccCccceeEEEeccCCCchhccCccccceeEEecc--ccCcE
Confidence            5678899877 88999999999999877   4556667779999999999763           234555555  38999


Q ss_pred             EEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCc
Q psy14511        108 RLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPE  187 (488)
Q Consensus       108 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (488)
                      .+||...+..+..+..+..+++.+++.+....                                                
T Consensus        92 il~d~~~~s~~~~l~~~~~~~qdl~W~~~rd~------------------------------------------------  123 (1062)
T KOG1912|consen   92 ILVDFVLASVINWLSHSNDSVQDLCWVPARDD------------------------------------------------  123 (1062)
T ss_pred             EEEEehhhhhhhhhcCCCcchhheeeeeccCc------------------------------------------------
Confidence            99999888877777666555544443332210                                                


Q ss_pred             eeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCC-CCeEEEEeCCCCcE
Q psy14511        188 RILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPR-TTDLAVTNTCTEYI  266 (488)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~~~~~i  266 (488)
                                         +.+-+++......+.+|+..+|+..-....   ......|+.+.|- .+.+.+. +..|.+
T Consensus       124 -------------------Srd~LlaIh~ss~lvLwntdtG~k~Wk~~y---s~~iLs~f~~DPfd~rh~~~l-~s~g~v  180 (1062)
T KOG1912|consen  124 -------------------SRDVLLAIHGSSTLVLWNTDTGEKFWKYDY---SHEILSCFRVDPFDSRHFCVL-GSKGFV  180 (1062)
T ss_pred             -------------------chheeEEecCCcEEEEEEccCCceeecccc---CCcceeeeeeCCCCcceEEEE-ccCceE
Confidence                               123466667889999999999987665554   5567788999985 4666666 677877


Q ss_pred             EEEECCc-------ceeeeeeccccc----------------c-------EE--EEEe--cCCEEEEeecCCeEEEEECc
Q psy14511        267 DLWHEQE-------ERLIQKLRTHMH----------------Q-------VI--AMCW--NGNLLSCGTIGGNILHYDVR  312 (488)
Q Consensus       267 ~i~d~~~-------~~~~~~~~~~~~----------------~-------v~--~~~~--~~~~l~~~~~dg~i~i~d~~  312 (488)
                      .+-+.-.       ++..+.-..|..                .       .+  .++|  .-+.++.......+.++|++
T Consensus       181 l~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~lfi~~prellv~dle  260 (1062)
T KOG1912|consen  181 LSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNILFITFPRELLVFDLE  260 (1062)
T ss_pred             EEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhceEEEEeccceEEEcch
Confidence            7765421       222222222221                0       01  1222  22344455567779999987


Q ss_pred             CCCccceeeecCCccEEEEEEccCCc--EEEEEe-cCeEEEEECCCCC----------------CCccccee--------
Q psy14511        313 THSDYPTAITREGDVVCGLKWSPNGR--YLASGS-NNTVKIWDFRQLD----------------AKRPLGLI--------  365 (488)
Q Consensus       313 ~~~~~~~~~~~~~~~i~~~~~s~~~~--~l~~~~-d~~i~iwd~~~~~----------------~~~~~~~~--------  365 (488)
                      -. .++....-..+.+.-+.+-|+++  .|.+.- +|.+.+|-.+...                +...++..        
T Consensus       261 ~~-~~l~vvpier~~akfv~vlP~~~rd~LfclH~nG~ltirvrk~~~~~f~~~~~~l~~dl~~Q~~~vr~m~~~rp~~~  339 (1062)
T KOG1912|consen  261 YE-CCLAVVPIERGGAKFVDVLPDPRRDALFCLHSNGRLTIRVRKEEPTEFKKPNASLSMDLGEQVHVVRPMEEFRPVIG  339 (1062)
T ss_pred             hh-ceeEEEEeccCCcceeEeccCCCcceEEEEecCCeEEEEEeeccCccccccchhhccccccceEEEeechhccccee
Confidence            64 34444444444455566666653  555555 6888888765411                10000000        


Q ss_pred             ---------------------------------------------------------eeeecCCC---------------
Q psy14511        366 ---------------------------------------------------------VPKLKREG---------------  373 (488)
Q Consensus       366 ---------------------------------------------------------~~~~~~~~---------------  373 (488)
                                                                               ....|.||               
T Consensus       340 ~~cPs~~sa~avl~s~g~~~~w~l~~~ri~~~~~s~~iel~~pf~f~~~~~~v~k~~l~~LS~dg~h~sGs~~~~~~p~p  419 (1062)
T KOG1912|consen  340 ASCPSTPSALAVLYSSGDSTFWQLSNGRIHLDYRSSSIELVLPFDFNLSTKLVGKTSLISLSDDGSHSSGSTCVRMRPMP  419 (1062)
T ss_pred             ecCCCChhhhhhhhhcchhHHHhhhcCCcCcccccccccccccccccCceeehhhccccchhhcCCCCCCceeeecccCc
Confidence                                                                     00112222               


Q ss_pred             -----------CE-----EEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEE---------EeCCCc
Q psy14511        374 -----------RE-----LVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAA---------ASADET  428 (488)
Q Consensus       374 -----------~~-----l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t---------~~~dg~  428 (488)
                                 +.     -+++.|...|+|.++|+.++.....+..|...|.++.|--..+++-.         ++.-+.
T Consensus       420 ~~t~~~~~p~~n~~~~~~pLvAvGT~sGTV~vvdvst~~v~~~fsvht~~VkgleW~g~sslvSfsys~~n~~sg~vrN~  499 (1062)
T KOG1912|consen  420 ELTKVENDPGGNTPAGTVPLVAVGTNSGTVDVVDVSTNAVAASFSVHTSLVKGLEWLGNSSLVSFSYSHVNSASGGVRND  499 (1062)
T ss_pred             ccceeecCCCCCccceeeeeEEeecCCceEEEEEecchhhhhhhcccccceeeeeeccceeEEEeeeccccccccceeee
Confidence                       21     12233899999999999999999999999999999999766554422         222356


Q ss_pred             EEEEecCCCCcccc----ccccCCcceEEeecCCCceEEEE
Q psy14511        429 ISIWNCFPRDKKRK----ARQVGSGSSLEFAILKQPVSLTA  465 (488)
Q Consensus       429 v~iw~~~~~~~~~~----~~~~~~v~~~~~s~~~~~~~~~~  465 (488)
                      +.+-|+.+|..+..    .....+|..+..|..++++++..
T Consensus       500 l~vtdLrtGlsk~fR~l~~~despI~~irvS~~~~yLai~F  540 (1062)
T KOG1912|consen  500 LVVTDLRTGLSKRFRGLQKPDESPIRAIRVSSSGRYLAILF  540 (1062)
T ss_pred             EEEEEcccccccccccCCCCCcCcceeeeecccCceEEEEe
Confidence            78899999877643    34567789999999888886643

>KOG4547|consensus

Probab=99.39  E-value=6.9e-11  Score=104.60  Aligned_cols=142  Identities=15%  Similarity=0.207  Sum_probs=122.5

Q ss_pred             cEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEE
Q psy14511        210 DTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIA  289 (488)
Q Consensus       210 ~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~  289 (488)
                      .++.+...|.|.+|+...++....+.... |.+++.++.++.+-..|.++ +.|+.+..|+....+.++.+.+....+.+
T Consensus        72 ~lvlgt~~g~v~~ys~~~g~it~~~st~~-h~~~v~~~~~~~~~~ciyS~-~ad~~v~~~~~~~~~~~~~~~~~~~~~~s  149 (541)
T KOG4547|consen   72 MLVLGTPQGSVLLYSVAGGEITAKLSTDK-HYGNVNEILDAQRLGCIYSV-GADLKVVYILEKEKVIIRIWKEQKPLVSS  149 (541)
T ss_pred             EEEeecCCccEEEEEecCCeEEEEEecCC-CCCcceeeecccccCceEec-CCceeEEEEecccceeeeeeccCCCccce
Confidence            35556689999999999999888888777 99999999999999999999 99999999999999999999888888888


Q ss_pred             EEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccC-----CcEEEEEec--CeEEEEECCCC
Q psy14511        290 MCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPN-----GRYLASGSN--NTVKIWDFRQL  356 (488)
Q Consensus       290 ~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~-----~~~l~~~~d--~~i~iwd~~~~  356 (488)
                      +++  |+..+++++  ++|++||+++. +.+..+.+|.++|++++|-.+     |.++.++..  ..+.+|-++..
T Consensus       150 l~is~D~~~l~~as--~~ik~~~~~~k-evv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~~  222 (541)
T KOG4547|consen  150 LCISPDGKILLTAS--RQIKVLDIETK-EVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEKE  222 (541)
T ss_pred             EEEcCCCCEEEecc--ceEEEEEccCc-eEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEEEEcc
Confidence            887  777888775  67999999985 688999999999999999887     778877763  77888877654

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=99.37  E-value=3.3e-08  Score=98.58  Aligned_cols=353  Identities=16%  Similarity=0.213  Sum_probs=195.8

Q ss_pred             cCceEEEEEEccCCcEEEEec-CCeEEEE----eccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEE
Q psy14511         35 EGDVVCGLKWSPNGRYLASGS-NNTVKIW----DFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRL  109 (488)
Q Consensus        35 h~~~V~~l~~sp~g~~las~~-d~~i~vw----d~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~v  109 (488)
                      ..+.|.++.|-++..-|+.+. +|.|.+.    +..+    ..+.....-...|.+++||||++.|+.+.+   ++++.+
T Consensus        74 ~~~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~----~~~E~VG~vd~GI~a~~WSPD~Ella~vT~---~~~l~~  146 (928)
T PF04762_consen   74 PNDKIVSFQYLADSESLCIALASGDIILVREDPDPDE----DEIEIVGSVDSGILAASWSPDEELLALVTG---EGNLLL  146 (928)
T ss_pred             CCCcEEEEEeccCCCcEEEEECCceEEEEEccCCCCC----ceeEEEEEEcCcEEEEEECCCcCEEEEEeC---CCEEEE
Confidence            346799999999988777776 8999998    4433    122222334578999999999998887776   888887


Q ss_pred             EecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccc---cccCCC
Q psy14511        110 WNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPR---KVKAKP  186 (488)
Q Consensus       110 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~  186 (488)
                      .+ .+...+.+............             ...-||.-+             ..++.....+...   ..+..+
T Consensus       147 mt-~~fd~i~E~~l~~~~~~~~~-------------~VsVGWGkK-------------eTQF~Gs~gK~aa~~~~~p~~~  199 (928)
T PF04762_consen  147 MT-RDFDPISEVPLDSDDFGESK-------------HVSVGWGKK-------------ETQFHGSAGKAAARQLRDPTVP  199 (928)
T ss_pred             Ee-ccceEEEEeecCccccCCCc-------------eeeeccCcc-------------cCccCcchhhhhhhhccCCCCC
Confidence            75 45555555444322111100             000111100             0111111111100   011111


Q ss_pred             ceeecCCCccccceeeeeeeCC-CcEEEEE----C---CCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEE
Q psy14511        187 ERILEAPSIINDFYTSGLDWGY-HDTLAVA----L---DTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAV  258 (488)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~---d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~  258 (488)
                       + ........+.....++|.+ +.+++++    .   -..+++|+-+ |.....-+.   ..+--.+++|.|.|+.+++
T Consensus       200 -~-~d~~~~s~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE~---v~gLe~~l~WrPsG~lIA~  273 (928)
T PF04762_consen  200 -K-VDEGKLSWDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQSTSEP---VDGLEGALSWRPSGNLIAS  273 (928)
T ss_pred             -c-cccCccccCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ceEEecccc---CCCccCCccCCCCCCEEEE
Confidence             0 0111111333455688865 5666654    1   2578999976 544333331   3344457899999999988


Q ss_pred             EeC--CCCcEEEEECCc---ceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccc-eeee-cCCccEE
Q psy14511        259 TNT--CTEYIDLWHEQE---ERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYP-TAIT-REGDVVC  329 (488)
Q Consensus       259 ~~~--~~~~i~i~d~~~---~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~-~~~~~i~  329 (488)
                      .-.  ....|.+|.-+.   ++....+......|..+.|  |+..|+....|. |.+|-..+..=.+ +.+. .....+.
T Consensus       274 ~q~~~~~~~VvFfErNGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NYHWYLKqei~~~~~~~~~  352 (928)
T PF04762_consen  274 SQRLPDRHDVVFFERNGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSNYHWYLKQEIRFSSSESVN  352 (928)
T ss_pred             EEEcCCCcEEEEEecCCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeCCEEEEEEEEEccCCCCCC
Confidence            722  134566666332   2222223345678899999  678888876555 9999988754111 2222 1223345


Q ss_pred             EEEEccCC-cEEEEEec-CeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcc---e--eEEEe
Q psy14511        330 GLKWSPNG-RYLASGSN-NTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLH---L--IEELK  402 (488)
Q Consensus       330 ~~~~s~~~-~~l~~~~d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~---~--~~~~~  402 (488)
                      .+.|+|.. ..|...+. +.+..++..-.-.      .....+|+..-.++  --+...+.+-.++..-   +  ...+.
T Consensus       353 ~~~Wdpe~p~~L~v~t~~g~~~~~~~~~~v~------~s~~~~~~D~g~va--VIDG~~lllTpf~~a~VPPPMs~~~l~  424 (928)
T PF04762_consen  353 FVKWDPEKPLRLHVLTSNGQYEIYDFAWDVS------RSPGSSPNDNGTVA--VIDGNKLLLTPFRRAVVPPPMSSYELE  424 (928)
T ss_pred             ceEECCCCCCEEEEEecCCcEEEEEEEEEEE------ecCCCCccCceEEE--EEeCCeEEEecccccCCCchHhceEEc
Confidence            59999954 44555554 7776666431100      00011222222222  1223345555544321   1  12332


Q ss_pred             eccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCC
Q psy14511        403 IHQERILSAVLSPDQTCVAAASADETISIWNCFPR  437 (488)
Q Consensus       403 ~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~  437 (488)
                       -..+|.+++|++++..+|+-..||.|.+|.....
T Consensus       425 -~~~~v~~vaf~~~~~~~avl~~d~~l~~~~~~~~  458 (928)
T PF04762_consen  425 -LPSPVNDVAFSPSNSRFAVLTSDGSLSIYEWDLK  458 (928)
T ss_pred             -CCCCcEEEEEeCCCCeEEEEECCCCEEEEEecCC
Confidence             3568999999999998999999999999996543

>KOG2041|consensus

Probab=99.37  E-value=5.8e-10  Score=101.11  Aligned_cols=334  Identities=14%  Similarity=0.232  Sum_probs=208.3

Q ss_pred             cc--CCceEEEeecCCeEEEEEcccCc--------------ccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEec
Q psy14511          2 CW--NGNLLSCGTIGGNILHYDVRTHS--------------DYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDF   64 (488)
Q Consensus         2 ~~--dg~~la~g~~dg~i~iwd~~~~~--------------~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~   64 (488)
                      +|  +..++|+|+.||.++|..+.+..              ...+.+.||.+.|.-+.|+.+.+.|-+.. +|.|.||-+
T Consensus        21 ~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~GlIiVWml  100 (1189)
T KOG2041|consen   21 EWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTSGLIIVWML  100 (1189)
T ss_pred             EEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCCceEEEEee
Confidence            46  57799999999999999876532              12346789999999999999999998887 999999998


Q ss_pred             cccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeee-eeecCCCcccccccccccccccee
Q psy14511         65 RQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKC-HVKTDSQQANDETISYREQKKRRH  143 (488)
Q Consensus        65 ~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  143 (488)
                      -.+.-..... -.-..+.|.+++|..||..+..+-.   ||.|.+=.++..+... .+++.                   
T Consensus       101 ykgsW~EEMi-NnRnKSvV~SmsWn~dG~kIcIvYe---DGavIVGsvdGNRIwgKeLkg~-------------------  157 (1189)
T KOG2041|consen  101 YKGSWCEEMI-NNRNKSVVVSMSWNLDGTKICIVYE---DGAVIVGSVDGNRIWGKELKGQ-------------------  157 (1189)
T ss_pred             ecccHHHHHh-hCcCccEEEEEEEcCCCcEEEEEEc---cCCEEEEeeccceecchhcchh-------------------
Confidence            7654322221 1224567999999999998888776   9988877664332110 01100                   


Q ss_pred             EEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCC--CcEEEEECCCeEE
Q psy14511        144 LSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGY--HDTLAVALDTSVY  221 (488)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~v~  221 (488)
                                                                              ....+.|++  ..++.+-..|.+.
T Consensus       158 --------------------------------------------------------~l~hv~ws~D~~~~Lf~~ange~h  181 (1189)
T KOG2041|consen  158 --------------------------------------------------------LLAHVLWSEDLEQALFKKANGETH  181 (1189)
T ss_pred             --------------------------------------------------------eccceeecccHHHHHhhhcCCcEE
Confidence                                                                    001123332  2334444667777


Q ss_pred             EEECCCCce-----EEEEecCC---CCCCceEEEEEc--------CCCCeEEEEeCCCCcEEEEECCcceeeeeeccccc
Q psy14511        222 TWNTKTNKT-----QLLVEYPT---YDNAYISCVAWK--------PRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMH  285 (488)
Q Consensus       222 iw~~~~~~~-----~~~~~~~~---~~~~~i~~~~~~--------~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~  285 (488)
                      +||....-.     .......+   .....|..+.|.        |+...++++ ..+|.+.+..-........+.. .-
T Consensus       182 lydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lavc-y~nGr~QiMR~eND~~Pvv~dt-gm  259 (1189)
T KOG2041|consen  182 LYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVC-YANGRMQIMRSENDPEPVVVDT-GM  259 (1189)
T ss_pred             EecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCCEEEEE-EcCceehhhhhcCCCCCeEEec-cc
Confidence            777654311     11111100   012224445443        577888888 8899888875443322222221 25


Q ss_pred             cEEEEEe--cCCEEEEeecC---------CeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECC
Q psy14511        286 QVIAMCW--NGNLLSCGTIG---------GNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFR  354 (488)
Q Consensus       286 ~v~~~~~--~~~~l~~~~~d---------g~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~  354 (488)
                      .+....|  +|..|+.++.+         +.|.+|..-  +.....+......|++++|-..|-.+|.+-|+.|.+=+++
T Consensus       260 ~~vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fysp~--G~i~gtlkvpg~~It~lsWEg~gLriA~AvdsfiyfanIR  337 (1189)
T KOG2041|consen  260 KIVGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFYSPY--GHIVGTLKVPGSCITGLSWEGTGLRIAIAVDSFIYFANIR  337 (1189)
T ss_pred             EeecceecCCCcEEEEccCcccccCccccceEEEeccc--hhheEEEecCCceeeeeEEcCCceEEEEEecceEEEEeec
Confidence            5667777  67888887754         246666543  2466677777888999999999989999989999888877


Q ss_pred             CCCCCcccceeeeeecCCCCEEEEEccCC---CCeEEEEeCCCcce-eEEEeeccccEEEEEEcCCCCEEEEEeCCCcEE
Q psy14511        355 QLDAKRPLGLIVPKLKREGRELVTSHGKQ---DCSLKMWEYPRLHL-IEELKIHQERILSAVLSPDQTCVAAASADETIS  430 (488)
Q Consensus       355 ~~~~~~~~~~~~~~~~~~~~~l~~~~g~~---~~~i~i~d~~~~~~-~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~  430 (488)
                      ...          .|..-.+.++......   ...|.+||..+.+. +.+..    +..+++++.+--.|++-..||.+.
T Consensus       338 P~y----------kWgy~e~TvVy~y~~~e~p~y~i~Fwdtk~nek~vK~V~----~~~~~a~~~ehCvL~~~~d~~~i~  403 (1189)
T KOG2041|consen  338 PEY----------KWGYIEETVVYVYQKEELPQYGIMFWDTKTNEKTVKTVT----HFENMAFYREHCVLINRQDDGVIP  403 (1189)
T ss_pred             ccc----------eEEEeeeEEEEEEccCCCcceEEEEEecccChhhhhhhc----ceeehheecccEEEEeccccCCCc
Confidence            431          1111122222211111   23488999987653 23322    245677777766777777777776


Q ss_pred             EE
Q psy14511        431 IW  432 (488)
Q Consensus       431 iw  432 (488)
                      -+
T Consensus       404 e~  405 (1189)
T KOG2041|consen  404 EY  405 (1189)
T ss_pred             ch
Confidence            55

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=99.36  E-value=2.1e-07  Score=93.01  Aligned_cols=354  Identities=14%  Similarity=0.163  Sum_probs=200.3

Q ss_pred             CCceEEEeecCCeEEEE----EcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEecc----c--------
Q psy14511          4 NGNLLSCGTIGGNILHY----DVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFR----Q--------   66 (488)
Q Consensus         4 dg~~la~g~~dg~i~iw----d~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~----~--------   66 (488)
                      |...++.+..+|.|.+.    |..+..  ......-...|.+++||||+.+||... ++++.+.+-.    .        
T Consensus        86 d~~~l~~~~~~Gdi~~~~~~~~~~~~~--~E~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~mt~~fd~i~E~~l~~~~  163 (928)
T PF04762_consen   86 DSESLCIALASGDIILVREDPDPDEDE--IEIVGSVDSGILAASWSPDEELLALVTGEGNLLLMTRDFDPISEVPLDSDD  163 (928)
T ss_pred             CCCcEEEEECCceEEEEEccCCCCCce--eEEEEEEcCcEEEEEECCCcCEEEEEeCCCEEEEEeccceEEEEeecCccc
Confidence            55567778889999999    544433  234445566899999999999999887 7777765421    0        


Q ss_pred             -----------cCc--------CC--------Cc------ccccccccceeEEEEecCCCeEEeeeCCcc---cceEEEE
Q psy14511         67 -----------LDA--------KR--------PQ------VNNQCHLSAVKAIAWCPWEPTLLATGGGIC---DQTVRLW  110 (488)
Q Consensus        67 -----------~~~--------~~--------~~------~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~---d~~i~vw  110 (488)
                                 |+.        .+        +.      ..+. +...-..++|-.||++++++.-...   -+.++||
T Consensus       164 ~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s-~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy  242 (928)
T PF04762_consen  164 FGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLS-WDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVY  242 (928)
T ss_pred             cCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccc-cCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEE
Confidence                       000        00        00      0011 2334567899999998777654111   3689999


Q ss_pred             ecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceee
Q psy14511        111 NSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERIL  190 (488)
Q Consensus       111 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (488)
                      +- .|...........-.                                                              
T Consensus       243 ~R-eG~L~stSE~v~gLe--------------------------------------------------------------  259 (928)
T PF04762_consen  243 SR-EGELQSTSEPVDGLE--------------------------------------------------------------  259 (928)
T ss_pred             CC-CceEEeccccCCCcc--------------------------------------------------------------
Confidence            95 465433222111111                                                              


Q ss_pred             cCCCccccceeeeeeeCC-CcEEEEEC----CCeEEEEECCCCceEEEEecCC-CCCCceEEEEEcCCCCeEEEEeCCCC
Q psy14511        191 EAPSIINDFYTSGLDWGY-HDTLAVAL----DTSVYTWNTKTNKTQLLVEYPT-YDNAYISCVAWKPRTTDLAVTNTCTE  264 (488)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~-~~~~~~~~----d~~v~iw~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~~~~  264 (488)
                                 ..++|.+ +.++++..    ...|.+|.-+.-+ ...+.++. .....+..++|++++..|++. ..+.
T Consensus       260 -----------~~l~WrPsG~lIA~~q~~~~~~~VvFfErNGLr-hgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~-~~~~  326 (928)
T PF04762_consen  260 -----------GALSWRPSGNLIASSQRLPDRHDVVFFERNGLR-HGEFTLRFDPEEEKVIELAWNSDSEILAVW-LEDR  326 (928)
T ss_pred             -----------CCccCCCCCCEEEEEEEcCCCcEEEEEecCCcE-eeeEecCCCCCCceeeEEEECCCCCEEEEE-ecCC
Confidence                       1244443 45666552    3566677644322 22233321 156789999999999999998 5444


Q ss_pred             cEEEEECCcceee--eeecc-ccccEEEEEe---cCCEEEEeecCCeEEEEEC----cCCC----------------c--
Q psy14511        265 YIDLWHEQEERLI--QKLRT-HMHQVIAMCW---NGNLLSCGTIGGNILHYDV----RTHS----------------D--  316 (488)
Q Consensus       265 ~i~i~d~~~~~~~--~~~~~-~~~~v~~~~~---~~~~l~~~~~dg~i~i~d~----~~~~----------------~--  316 (488)
                       |.+|-..+..--  +.+.- ....+..+.|   +...|...+.+|.+..++.    ....                .  
T Consensus       327 -vqLWt~~NYHWYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~~~~~~~v~~s~~~~~~D~g~vaVIDG~~ll  405 (928)
T PF04762_consen  327 -VQLWTRSNYHWYLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYEIYDFAWDVSRSPGSSPNDNGTVAVIDGNKLL  405 (928)
T ss_pred             -ceEEEeeCCEEEEEEEEEccCCCCCCceEECCCCCCEEEEEecCCcEEEEEEEEEEEecCCCCccCceEEEEEeCCeEE
Confidence             999987764321  12211 1223344777   3455666666565554432    1100                0  


Q ss_pred             -----------c-ceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCC--------cccce-----------
Q psy14511        317 -----------Y-PTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAK--------RPLGL-----------  364 (488)
Q Consensus       317 -----------~-~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~--------~~~~~-----------  364 (488)
                                 + .........+|..++|++++..+|+-. ||.+.+|........        ..+..           
T Consensus       406 lTpf~~a~VPPPMs~~~l~~~~~v~~vaf~~~~~~~avl~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  485 (928)
T PF04762_consen  406 LTPFRRAVVPPPMSSYELELPSPVNDVAFSPSNSRFAVLTSDGSLSIYEWDLKNMWSVKPPKLLSSISLDSMDISDSELP  485 (928)
T ss_pred             EecccccCCCchHhceEEcCCCCcEEEEEeCCCCeEEEEECCCCEEEEEecCCCcccccCcchhhhcccccccccccccc
Confidence                       0 001112346799999999987666655 799999985443211        00110           


Q ss_pred             ---e-eeeecCCCCEEEEEccC-CCCeEEEEeCCCcc---eeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCC
Q psy14511        365 ---I-VPKLKREGRELVTSHGK-QDCSLKMWEYPRLH---LIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFP  436 (488)
Q Consensus       365 ---~-~~~~~~~~~~l~~~~g~-~~~~i~i~d~~~~~---~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~  436 (488)
                         . .-.|..+...++..... ....+.+++....+   .+.....-.+.+..+...++...++.-..||.+...+...
T Consensus       486 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~G~v~~~~~~~  565 (928)
T PF04762_consen  486 LGSLRQLAWLNDDTLLVLSDSDSNQSKIVLVDIDDSENSASVESSTEVDGVVLIISSSPDSGSLYIQTNDGKVFQLSSDG  565 (928)
T ss_pred             cccEEEEEEeCCCEEEEEEecCcccceEEEEEeccCCCceeEEEEeccCceEEEEeeCCCCcEEEEEECCCEEEEeecCC
Confidence               0 11555555555554332 45678888774332   2233333345566666666665566777799888666554


Q ss_pred             C
Q psy14511        437 R  437 (488)
Q Consensus       437 ~  437 (488)
                      .
T Consensus       566 ~  566 (928)
T PF04762_consen  566 E  566 (928)
T ss_pred             C
Confidence            3

>KOG2041|consensus

Probab=99.36  E-value=3.2e-10  Score=102.76  Aligned_cols=229  Identities=14%  Similarity=0.209  Sum_probs=146.6

Q ss_pred             cCceEEEEEEccCCcEEEEec-CCeEEEEeccccCc------------CCCcccccccccceeEEEEecCCCeEEeeeCC
Q psy14511         35 EGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDA------------KRPQVNNQCHLSAVKAIAWCPWEPTLLATGGG  101 (488)
Q Consensus        35 h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~------------~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~  101 (488)
                      ......|++|+....|+|.|+ ||.++|-.+.+...            ...-+++.||++.|.-+.|+.+.+.|-++.. 
T Consensus        13 nnvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt-   91 (1189)
T KOG2041|consen   13 NNVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDT-   91 (1189)
T ss_pred             CCceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCC-
Confidence            344689999999999999999 99999998865221            1122357899999999999988876544444 


Q ss_pred             cccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeeccccccccc
Q psy14511        102 ICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRK  181 (488)
Q Consensus       102 ~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (488)
                        +|.|.+|-+-.|.....+.....                                                       
T Consensus        92 --~GlIiVWmlykgsW~EEMiNnRn-------------------------------------------------------  114 (1189)
T KOG2041|consen   92 --SGLIIVWMLYKGSWCEEMINNRN-------------------------------------------------------  114 (1189)
T ss_pred             --CceEEEEeeecccHHHHHhhCcC-------------------------------------------------------
Confidence              99999999988765443332211                                                       


Q ss_pred             ccCCCceeecCCCccccceeeeeeeC--CCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEE
Q psy14511        182 VKAKPERILEAPSIINDFYTSGLDWG--YHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVT  259 (488)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~  259 (488)
                                      ...+.+++|.  +.++..+-.||.|.+=.++.++.- -..+   .......+.|++|.+.++.+
T Consensus       115 ----------------KSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNRIw-gKeL---kg~~l~hv~ws~D~~~~Lf~  174 (1189)
T KOG2041|consen  115 ----------------KSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNRIW-GKEL---KGQLLAHVLWSEDLEQALFK  174 (1189)
T ss_pred             ----------------ccEEEEEEEcCCCcEEEEEEccCCEEEEeeccceec-chhc---chheccceeecccHHHHHhh
Confidence                            0111222332  122333334444444333322210 0111   22234578899999988888


Q ss_pred             eCCCCcEEEEECCcc-------eeee----eeccccccEEEEEe----------cCCEEEEeecCCeEEEEECcCCCccc
Q psy14511        260 NTCTEYIDLWHEQEE-------RLIQ----KLRTHMHQVIAMCW----------NGNLLSCGTIGGNILHYDVRTHSDYP  318 (488)
Q Consensus       260 ~~~~~~i~i~d~~~~-------~~~~----~~~~~~~~v~~~~~----------~~~~l~~~~~dg~i~i~d~~~~~~~~  318 (488)
                       -..|.+.+||.+..       .+..    .+......+..+.|          +-..++.+..+|.+.+..-.+...+.
T Consensus       175 -~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lavcy~nGr~QiMR~eND~~Pv  253 (1189)
T KOG2041|consen  175 -KANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVCYANGRMQIMRSENDPEPV  253 (1189)
T ss_pred             -hcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCCEEEEEEcCceehhhhhcCCCCCe
Confidence             88999999997642       1111    11222334556666          34588999999999987776655444


Q ss_pred             eeeecCCccEEEEEEccCCcEEEEEe
Q psy14511        319 TAITREGDVVCGLKWSPNGRYLASGS  344 (488)
Q Consensus       319 ~~~~~~~~~i~~~~~s~~~~~l~~~~  344 (488)
                      ..-.+  -.+..+.|+++|..||.++
T Consensus       254 v~dtg--m~~vgakWnh~G~vLAvcG  277 (1189)
T KOG2041|consen  254 VVDTG--MKIVGAKWNHNGAVLAVCG  277 (1189)
T ss_pred             EEecc--cEeecceecCCCcEEEEcc
Confidence            44444  4588899999999999987

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=99.35  E-value=2.1e-09  Score=98.36  Aligned_cols=222  Identities=8%  Similarity=-0.050  Sum_probs=139.9

Q ss_pred             CCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEE-EEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecccccc
Q psy14511        208 YHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISC-VAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQ  286 (488)
Q Consensus       208 ~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~  286 (488)
                      ++.+++++.++.++.+|..+++..-.....+    .+.+ ...  .+..++++ ..++.+..+|.++++.+.........
T Consensus       105 ~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~----~~~~~p~v--~~~~v~v~-~~~g~l~a~d~~tG~~~W~~~~~~~~  177 (377)
T TIGR03300       105 GGLVFVGTEKGEVIALDAEDGKELWRAKLSS----EVLSPPLV--ANGLVVVR-TNDGRLTALDAATGERLWTYSRVTPA  177 (377)
T ss_pred             CCEEEEEcCCCEEEEEECCCCcEeeeeccCc----eeecCCEE--ECCEEEEE-CCCCeEEEEEcCCCceeeEEccCCCc
Confidence            4667888899999999999998766555432    2221 112  24567777 78999999999999887776543221


Q ss_pred             E-----EEEEecCCEEEEeecCCeEEEEECcCCCccceeeecCC---c---c---E-EEEEEccCCcEEEEEe-cCeEEE
Q psy14511        287 V-----IAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREG---D---V---V-CGLKWSPNGRYLASGS-NNTVKI  350 (488)
Q Consensus       287 v-----~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~---~---~---i-~~~~~s~~~~~l~~~~-d~~i~i  350 (488)
                      .     .+....+..++.+..++.+..+|.++++.....-....   .   .   + ....+  .+..+..++ ++.+..
T Consensus       178 ~~~~~~~sp~~~~~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~--~~~~vy~~~~~g~l~a  255 (377)
T TIGR03300       178 LTLRGSASPVIADGGVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVV--DGGQVYAVSYQGRVAA  255 (377)
T ss_pred             eeecCCCCCEEECCEEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEE--ECCEEEEEEcCCEEEE
Confidence            1     11222345778888899999999988753221111000   0   0   0 01111  234555555 699999


Q ss_pred             EECCCCCCCccccee-eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccc-cEEEEEEcCCCCEEEEEeCCCc
Q psy14511        351 WDFRQLDAKRPLGLI-VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQE-RILSAVLSPDQTCVAAASADET  428 (488)
Q Consensus       351 wd~~~~~~~~~~~~~-~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~t~~~dg~  428 (488)
                      ||..+++..-..... ......++..+++  +..+|.++.+|..+++.+........ ...+...  .+..|++++.||.
T Consensus       256 ~d~~tG~~~W~~~~~~~~~p~~~~~~vyv--~~~~G~l~~~d~~tG~~~W~~~~~~~~~~ssp~i--~g~~l~~~~~~G~  331 (377)
T TIGR03300       256 LDLRSGRVLWKRDASSYQGPAVDDNRLYV--TDADGVVVALDRRSGSELWKNDELKYRQLTAPAV--VGGYLVVGDFEGY  331 (377)
T ss_pred             EECCCCcEEEeeccCCccCceEeCCEEEE--ECCCCeEEEEECCCCcEEEccccccCCccccCEE--ECCEEEEEeCCCE
Confidence            999887543222211 1122345667776  56799999999999988765532211 1222222  4678899999999


Q ss_pred             EEEEecCCCCcccc
Q psy14511        429 ISIWNCFPRDKKRK  442 (488)
Q Consensus       429 v~iw~~~~~~~~~~  442 (488)
                      |+++|..+++.+..
T Consensus       332 l~~~d~~tG~~~~~  345 (377)
T TIGR03300       332 LHWLSREDGSFVAR  345 (377)
T ss_pred             EEEEECCCCCEEEE
Confidence            99999999987743

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>PRK04043 tolB translocation protein TolB; Provisional

Probab=99.34  E-value=1.4e-09  Score=99.31  Aligned_cols=227  Identities=10%  Similarity=0.030  Sum_probs=142.3

Q ss_pred             CeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCe-EEEEeCC--CCcEEEEECCcceeeeeeccccccEEEEEe--
Q psy14511        218 TSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTD-LAVTNTC--TEYIDLWHEQEERLIQKLRTHMHQVIAMCW--  292 (488)
Q Consensus       218 ~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~~~--~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--  292 (488)
                      ..|.+-|.+.........    . .......|+|+|+. ++.....  ...|.++|+.+++...... ..+......|  
T Consensus       169 ~~l~~~d~dg~~~~~~~~----~-~~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~-~~g~~~~~~~SP  242 (419)
T PRK04043        169 SNIVLADYTLTYQKVIVK----G-GLNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIAS-SQGMLVVSDVSK  242 (419)
T ss_pred             ceEEEECCCCCceeEEcc----C-CCeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEec-CCCcEEeeEECC
Confidence            466666665554333322    2 36778999999985 6654233  3578888998876544333 3344444445  


Q ss_pred             cCCEEEE-eecC--CeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEec----CeEEEEECCCCCCCcccce-
Q psy14511        293 NGNLLSC-GTIG--GNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN----NTVKIWDFRQLDAKRPLGL-  364 (488)
Q Consensus       293 ~~~~l~~-~~~d--g~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d----~~i~iwd~~~~~~~~~~~~-  364 (488)
                      ||+.++. .+.+  ..|+++|+..+.  ...+..+........|+|||+.|+..++    ..|.+.|+.+++..+.... 
T Consensus       243 DG~~la~~~~~~g~~~Iy~~dl~~g~--~~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~g  320 (419)
T PRK04043        243 DGSKLLLTMAPKGQPDIYLYDTNTKT--LTQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVFHG  320 (419)
T ss_pred             CCCEEEEEEccCCCcEEEEEECCCCc--EEEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCccCC
Confidence            7876654 3333  568888887653  3344444333345689999999888874    3688888887665333221 


Q ss_pred             -eeeeecCCCCEEEEEccCCC-------CeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCC---CcEEEEe
Q psy14511        365 -IVPKLKREGRELVTSHGKQD-------CSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASAD---ETISIWN  433 (488)
Q Consensus       365 -~~~~~~~~~~~l~~~~g~~~-------~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~d---g~v~iw~  433 (488)
                       ....|+|||+.++......+       ..|.+.|+.+++. ..+... .......|+|||+.|+..+.+   ..+.+.+
T Consensus       321 ~~~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~-~~LT~~-~~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~  398 (419)
T PRK04043        321 KNNSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYI-RRLTAN-GVNQFPRFSSDGGSIMFIKYLGNQSALGIIR  398 (419)
T ss_pred             CcCceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCe-EECCCC-CCcCCeEECCCCCEEEEEEccCCcEEEEEEe
Confidence             22389999999988643321       4788899988764 334332 233468999999988876644   2477778


Q ss_pred             cCCCCccccccccCCcceEEe
Q psy14511        434 CFPRDKKRKARQVGSGSSLEF  454 (488)
Q Consensus       434 ~~~~~~~~~~~~~~~v~~~~~  454 (488)
                      +.......+....+.+...+|
T Consensus       399 l~g~~~~~l~~~~g~~~~p~W  419 (419)
T PRK04043        399 LNYNKSFLFPLKVGKIQSIDW  419 (419)
T ss_pred             cCCCeeEEeecCCCccCCCCC
Confidence            776655555555555555444

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=99.28  E-value=1.4e-08  Score=82.61  Aligned_cols=217  Identities=17%  Similarity=0.216  Sum_probs=137.2

Q ss_pred             CCCcEEEEECCCeEEEEECCCC--ceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecc--
Q psy14511        207 GYHDTLAVALDTSVYTWNTKTN--KTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRT--  282 (488)
Q Consensus       207 ~~~~~~~~~~d~~v~iw~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~--  282 (488)
                      +++++++.-.|..|.+-..+..  ..+...+.+......-+-++|+||+..|+.+ ...|+|++||+... .+..+..  
T Consensus         7 ~~Gk~lAi~qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a-~S~G~i~vfdl~g~-~lf~I~p~~   84 (282)
T PF15492_consen    7 SDGKLLAILQDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYA-ESTGTIRVFDLMGS-ELFVIPPAM   84 (282)
T ss_pred             CCCcEEEEEeccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEE-cCCCeEEEEecccc-eeEEcCccc
Confidence            4578999999999988776653  2233334433244456789999999999999 99999999998763 3333321  


Q ss_pred             -----ccccEEEEEe-c-------CCEEEEeecCCeEEEEECcCC--Cc--ccee--e-ecCCccEEEEEEccCCcEEEE
Q psy14511        283 -----HMHQVIAMCW-N-------GNLLSCGTIGGNILHYDVRTH--SD--YPTA--I-TREGDVVCGLKWSPNGRYLAS  342 (488)
Q Consensus       283 -----~~~~v~~~~~-~-------~~~l~~~~~dg~i~i~d~~~~--~~--~~~~--~-~~~~~~i~~~~~s~~~~~l~~  342 (488)
                           -...|..+.| +       ...|++-..+|.++-|-+..+  +.  ....  + ..+...|.++.++|..++|++
T Consensus        85 ~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlV  164 (282)
T PF15492_consen   85 SFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHRLLLV  164 (282)
T ss_pred             ccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCCCEEEE
Confidence                 2345666666 1       236677778888887775332  11  1111  2 234567999999999999888


Q ss_pred             Ee-c-C----------eEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCC------eEEEEeCCCcceeEEEeec
Q psy14511        343 GS-N-N----------TVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDC------SLKMWEYPRLHLIEELKIH  404 (488)
Q Consensus       343 ~~-d-~----------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~------~i~i~d~~~~~~~~~~~~~  404 (488)
                      ++ . .          -+.-|.+-+.             +|..+.+..   ..|+      +..+|.+.+.+........
T Consensus       165 gG~~~~~~~~s~a~~~GLtaWRiL~~-------------~Pyyk~v~~---~~~~~~~~~~~~~~~~~~~~~~fs~~~~~  228 (282)
T PF15492_consen  165 GGCEQNQDGMSKASSCGLTAWRILSD-------------SPYYKQVTS---SEDDITASSKRRGLLRIPSFKFFSRQGQE  228 (282)
T ss_pred             eccCCCCCccccccccCceEEEEcCC-------------CCcEEEccc---cCccccccccccceeeccceeeeeccccC
Confidence            87 2 2          1333433322             122222111   1111      1233443333222222234


Q ss_pred             cccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccc
Q psy14511        405 QERILSAVLSPDQTCVAAASADETISIWNCFPRDKKR  441 (488)
Q Consensus       405 ~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~  441 (488)
                      ...|..|..||||+.||+...+|.|.+|++.+-++..
T Consensus       229 ~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~  265 (282)
T PF15492_consen  229 QDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQR  265 (282)
T ss_pred             CCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhc
Confidence            5679999999999999999999999999999877663

>KOG1064|consensus

Probab=99.28  E-value=2.9e-11  Score=119.89  Aligned_cols=180  Identities=14%  Similarity=0.252  Sum_probs=143.8

Q ss_pred             ceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCccccccccccee
Q psy14511          6 NLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVK   84 (488)
Q Consensus         6 ~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~   84 (488)
                      -+.++|+.||.|++|....++++...-......|+.+.|+.+|+.+..+. ||.+.+|.+.    .++....++|.....
T Consensus      2221 ~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~----pk~~~s~qchnk~~~ 2296 (2439)
T KOG1064|consen 2221 PYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQAS----PKPYTSWQCHNKALS 2296 (2439)
T ss_pred             ceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecccC----CcceeccccCCcccc
Confidence            46789999999999999888876555555558899999999999888886 9999999987    567777889999999


Q ss_pred             EEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccc
Q psy14511         85 AIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKR  164 (488)
Q Consensus        85 ~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (488)
                      +..|-.  ..+++.|..+.++.+.+||..-...                                               
T Consensus      2297 Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~----------------------------------------------- 2327 (2439)
T KOG1064|consen 2297 DFRFIG--SLLATAGRSSDNRNVCLWDTLLPPM----------------------------------------------- 2327 (2439)
T ss_pred             ceeeee--hhhhccccCCCCCcccchhcccCcc-----------------------------------------------
Confidence            999986  4567777666688899998532110                                               


Q ss_pred             cccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCce
Q psy14511        165 TVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYI  244 (488)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i  244 (488)
                                                                                     ...+.  ..   |.+.+
T Consensus      2328 ---------------------------------------------------------------~s~v~--~~---H~~ga 2339 (2439)
T KOG1064|consen 2328 ---------------------------------------------------------------NSLVH--TC---HDGGA 2339 (2439)
T ss_pred             ---------------------------------------------------------------cceee--ee---cCCCc
Confidence                                                                           00011  11   88899


Q ss_pred             EEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCC
Q psy14511        245 SCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHS  315 (488)
Q Consensus       245 ~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~  315 (488)
                      +++++-|....+++| +.+|.|++||++..+..+.++.       +. ...++++|+..|.++||++....
T Consensus      2340 T~l~~~P~~qllisg-gr~G~v~l~D~rqrql~h~~~~-------~~-~~~~f~~~ss~g~ikIw~~s~~~ 2401 (2439)
T KOG1064|consen 2340 TVLAYAPKHQLLISG-GRKGEVCLFDIRQRQLRHTFQA-------LD-TREYFVTGSSEGNIKIWRLSEFG 2401 (2439)
T ss_pred             eEEEEcCcceEEEec-CCcCcEEEeehHHHHHHHHhhh-------hh-hhheeeccCcccceEEEEccccc
Confidence            999999999999988 9999999999998877777764       22 45789999999999999998754

>KOG1064|consensus

Probab=99.27  E-value=3.3e-11  Score=119.50  Aligned_cols=183  Identities=16%  Similarity=0.259  Sum_probs=151.1

Q ss_pred             CcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEE
Q psy14511        209 HDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVI  288 (488)
Q Consensus       209 ~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~  288 (488)
                      ..+++++.||.+++|....++.+..+...+ . ..++.+.|+.+|+.+.++ ..||.+.+|... .++....+.|.....
T Consensus      2221 ~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g-~-s~vtr~~f~~qGnk~~i~-d~dg~l~l~q~~-pk~~~s~qchnk~~~ 2296 (2439)
T KOG1064|consen 2221 PYYLTGSQDGSVRMFEWGHGQQVVCFRTAG-N-SRVTRSRFNHQGNKFGIV-DGDGDLSLWQAS-PKPYTSWQCHNKALS 2296 (2439)
T ss_pred             ceEEecCCCceEEEEeccCCCeEEEeeccC-c-chhhhhhhcccCCceeee-ccCCceeecccC-CcceeccccCCcccc
Confidence            467889999999999999998888877766 4 889999999999999999 999999999987 577788889999999


Q ss_pred             EEEecCCEEEEee---cCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccce
Q psy14511        289 AMCWNGNLLSCGT---IGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGL  364 (488)
Q Consensus       289 ~~~~~~~~l~~~~---~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~  364 (488)
                      .+.|-+..+++++   .++++.+||..........-..|.+.++++++-|..+.|++|+ +|.+++||++..+..+.++.
T Consensus      2297 Df~Fi~s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~h~~~~ 2376 (2439)
T KOG1064|consen 2297 DFRFIGSLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTFQA 2376 (2439)
T ss_pred             ceeeeehhhhccccCCCCCcccchhcccCcccceeeeecCCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHHHHhhh
Confidence            9999777777764   4689999998655433344488999999999999999999999 59999999997654444333


Q ss_pred             eeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEe
Q psy14511        365 IVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELK  402 (488)
Q Consensus       365 ~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~  402 (488)
                          +. ...++++  |+..|.++||++.....+.++.
T Consensus      2377 ----~~-~~~~f~~--~ss~g~ikIw~~s~~~ll~~~p 2407 (2439)
T KOG1064|consen 2377 ----LD-TREYFVT--GSSEGNIKIWRLSEFGLLHTFP 2407 (2439)
T ss_pred             ----hh-hhheeec--cCcccceEEEEccccchhhcCc
Confidence                44 5566676  8999999999998877766654

>KOG4190|consensus

Probab=99.24  E-value=5.9e-11  Score=104.21  Aligned_cols=209  Identities=15%  Similarity=0.228  Sum_probs=149.2

Q ss_pred             eecccCceEEEEEEccCCcEEEEec-CCeEEEEecccc-Cc---CCCcccccccccceeEEEEecCCCeEEeeeCCcccc
Q psy14511         31 AITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQL-DA---KRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQ  105 (488)
Q Consensus        31 ~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~-~~---~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~  105 (488)
                      .+.||+..|..++--.+.+-+++++ |++|++|.++.. ..   ..+..++..|+.+|.++.|..+-++++++     |+
T Consensus       730 nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~Sc-----D~  804 (1034)
T KOG4190|consen  730 NFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASC-----DG  804 (1034)
T ss_pred             cccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeec-----cC
Confidence            3579999999998877888888888 999999998742 11   22566778899999999999988775543     88


Q ss_pred             eEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCC
Q psy14511        106 TVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAK  185 (488)
Q Consensus       106 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (488)
                      .|.+||.--|..+..+......                                                          
T Consensus       805 giHlWDPFigr~Laq~~dapk~----------------------------------------------------------  826 (1034)
T KOG4190|consen  805 GIHLWDPFIGRLLAQMEDAPKE----------------------------------------------------------  826 (1034)
T ss_pred             cceeecccccchhHhhhcCccc----------------------------------------------------------
Confidence            9999998777655433221000                                                          


Q ss_pred             CceeecCCCccccceeeeeee-CCCcEEEE-ECCCeEEEEECCCCceEEEEec---CCCCCCceEEEEEcCCCCeEEEEe
Q psy14511        186 PERILEAPSIINDFYTSGLDW-GYHDTLAV-ALDTSVYTWNTKTNKTQLLVEY---PTYDNAYISCVAWKPRTTDLAVTN  260 (488)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~d~~v~iw~~~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~l~~~~  260 (488)
                                ...-.+.++.- +..-++++ +...+|+++|.+..+....++.   ++ .+.-+.+++..|.|++++++ 
T Consensus       827 ----------~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~-Pna~~R~iaVa~~GN~lAa~-  894 (1034)
T KOG4190|consen  827 ----------GAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPG-PNALTRAIAVADKGNKLAAA-  894 (1034)
T ss_pred             ----------CCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCC-CchheeEEEeccCcchhhHH-
Confidence                      00000011111 11234455 4788999999998887655544   33 56778999999999999999 


Q ss_pred             CCCCcEEEEECCcceeeeeeccccccEEEEEe-cCCEEEEeecCCeEEE-EECcCC
Q psy14511        261 TCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW-NGNLLSCGTIGGNILH-YDVRTH  314 (488)
Q Consensus       261 ~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~i-~d~~~~  314 (488)
                      -.+|.|.+.|.++|+.+..++...-....++. ..+.++....|.++.+ |....+
T Consensus       895 LSnGci~~LDaR~G~vINswrpmecdllqlaapsdq~L~~saldHslaVnWhaldg  950 (1034)
T KOG4190|consen  895 LSNGCIAILDARNGKVINSWRPMECDLLQLAAPSDQALAQSALDHSLAVNWHALDG  950 (1034)
T ss_pred             hcCCcEEEEecCCCceeccCCcccchhhhhcCchhHHHHhhcccceeEeeehhcCC
Confidence            99999999999999988888766555555554 5667777777888877 766543

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=99.22  E-value=2.9e-08  Score=80.73  Aligned_cols=245  Identities=14%  Similarity=0.162  Sum_probs=134.9

Q ss_pred             EEEEccCCcEEEEecCCeEEEEeccccC--cCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeee
Q psy14511         41 GLKWSPNGRYLASGSNNTVKIWDFRQLD--AKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEK  118 (488)
Q Consensus        41 ~l~~sp~g~~las~~d~~i~vwd~~~~~--~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~  118 (488)
                      .++.++||++||...|..|.|-..++.=  ........+...-.-..++||||+..|+.+.+   .|+|+++|+.. ..+
T Consensus         2 ~~~~~~~Gk~lAi~qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S---~G~i~vfdl~g-~~l   77 (282)
T PF15492_consen    2 HLALSSDGKLLAILQDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAES---TGTIRVFDLMG-SEL   77 (282)
T ss_pred             ceeecCCCcEEEEEeccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcC---CCeEEEEeccc-cee
Confidence            3677899999999999999887665310  00111112222334578999999987777766   99999999865 333


Q ss_pred             eeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCcccc
Q psy14511        119 CHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIIND  198 (488)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (488)
                      ..+........      +       +...+.|..+     +...                                    
T Consensus        78 f~I~p~~~~~~------d-------~~~Aiagl~F-----l~~~------------------------------------  103 (282)
T PF15492_consen   78 FVIPPAMSFPG------D-------LSDAIAGLIF-----LEYK------------------------------------  103 (282)
T ss_pred             EEcCcccccCC------c-------cccceeeeEe-----eccc------------------------------------
Confidence            33332211000      0       0000000000     0000                                    


Q ss_pred             ceeeeeeeCCCcEEEEECCCeEEEEECCC-----CceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCc
Q psy14511        199 FYTSGLDWGYHDTLAVALDTSVYTWNTKT-----NKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE  273 (488)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~d~~v~iw~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~  273 (488)
                         ..-.| ...+++....|.++-|-+..     .+....+.+..+....|.++.++|..+.|+++|.....-..     
T Consensus       104 ---~s~~w-s~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~-----  174 (282)
T PF15492_consen  104 ---KSAQW-SYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHRLLLVGGCEQNQDGM-----  174 (282)
T ss_pred             ---ccccc-ceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCCCEEEEeccCCCCCcc-----
Confidence               00001 13688888898888877532     23444555555467789999999999999998544432100     


Q ss_pred             ceeeeeeccccccEEEEEe-c--CCEE-EEeecCCe------EEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEE
Q psy14511        274 ERLIQKLRTHMHQVIAMCW-N--GNLL-SCGTIGGN------ILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASG  343 (488)
Q Consensus       274 ~~~~~~~~~~~~~v~~~~~-~--~~~l-~~~~~dg~------i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~  343 (488)
                            -++....+++-.. +  +.+. ++...|+.      ..+|.+-+.+ .........+.|..|..||||+.||+.
T Consensus       175 ------s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~-~fs~~~~~~d~i~kmSlSPdg~~La~i  247 (282)
T PF15492_consen  175 ------SKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFK-FFSRQGQEQDGIFKMSLSPDGSLLACI  247 (282)
T ss_pred             ------ccccccCceEEEEcCCCCcEEEccccCccccccccccceeecccee-eeeccccCCCceEEEEECCCCCEEEEE
Confidence                  0011222222222 1  1111 11121211      1223322211 111123345679999999999999999


Q ss_pred             e-cCeEEEEECCCCCCC
Q psy14511        344 S-NNTVKIWDFRQLDAK  359 (488)
Q Consensus       344 ~-d~~i~iwd~~~~~~~  359 (488)
                      . +|.|.+|++.+....
T Consensus       248 h~sG~lsLW~iPsL~~~  264 (282)
T PF15492_consen  248 HFSGSLSLWEIPSLRLQ  264 (282)
T ss_pred             EcCCeEEEEecCcchhh
Confidence            8 699999999876443

>KOG0280|consensus

Probab=99.19  E-value=8e-09  Score=83.74  Aligned_cols=266  Identities=12%  Similarity=0.126  Sum_probs=154.8

Q ss_pred             CCeEEEEEcccCcccc--eeecccCceEEEEEEcc---CCc-EEEEec-CCeEEEEeccccCcCCCccccccccc---ce
Q psy14511         14 GGNILHYDVRTHSDYP--TAITREGDVVCGLKWSP---NGR-YLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLS---AV   83 (488)
Q Consensus        14 dg~i~iwd~~~~~~~~--~~~~~h~~~V~~l~~sp---~g~-~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~---~v   83 (488)
                      .|.+.+|++...+..+  .........+..+.|..   +|. .|+-+. +|.|.++..........+..+..-.-   .-
T Consensus        45 ~Gkl~Lys~~d~~~~~l~~~q~~dts~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~  124 (339)
T KOG0280|consen   45 SGKLHLYSLEDMKLSPLDTLQCTDTSTEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVEA  124 (339)
T ss_pred             ccceEEEeecccccCccceeeeecccccceeeeeeccCCccceeeeccccceEEEEeeccceeeeeecccchhhhhheee
Confidence            4678899988766443  22223344577888874   555 334443 89999998764322222222222111   24


Q ss_pred             eEEEEecCCCeEEeeeCCcccceEEEEecCCCeeee--eeecCCCccccccccccccccceeEEEEEeeeeccccceecc
Q psy14511         84 KAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKC--HVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQ  161 (488)
Q Consensus        84 ~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (488)
                      .++.|++.+..++++-+   +|.+.+-+........  ..+.+........+                            
T Consensus       125 lslD~~~~~~~i~vs~s---~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f----------------------------  173 (339)
T KOG0280|consen  125 LSLDISTSGTKIFVSDS---RGSISGVYETEMVLEKVQTWKVHEFEAWTAKF----------------------------  173 (339)
T ss_pred             eEEEeeccCceEEEEcC---CCcEEEEecceeeeeecccccccceeeeeeec----------------------------
Confidence            57788998888777776   8888755543333222  22222111111110                            


Q ss_pred             ccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCC
Q psy14511        162 SKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDN  241 (488)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~  241 (488)
                                                                -.+.++-+++++.|+.+..||++... ..++.-...|.
T Consensus       174 ------------------------------------------~~~~pnlvytGgDD~~l~~~D~R~p~-~~i~~n~kvH~  210 (339)
T KOG0280|consen  174 ------------------------------------------SDKEPNLVYTGGDDGSLSCWDIRIPK-TFIWHNSKVHT  210 (339)
T ss_pred             ------------------------------------------ccCCCceEEecCCCceEEEEEecCCc-ceeeecceeee
Confidence                                                      01234667899999999999999433 22222111178


Q ss_pred             CceEEEEEcCC-CCeEEEEeCCCCcEEEEECCc-ceeeeeeccccccEEEEEec----CCEEEEeecCCeEEEEECcCCC
Q psy14511        242 AYISCVAWKPR-TTDLAVTNTCTEYIDLWHEQE-ERLIQKLRTHMHQVIAMCWN----GNLLSCGTIGGNILHYDVRTHS  315 (488)
Q Consensus       242 ~~i~~~~~~~~-~~~l~~~~~~~~~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~----~~~l~~~~~dg~i~i~d~~~~~  315 (488)
                      ..|.++.-+|. ..++++| +.|..|++||.+. ++++..-. -.+.|..+.+.    +.+++++-.+| .++-+.+...
T Consensus       211 ~GV~SI~ss~~~~~~I~TG-sYDe~i~~~DtRnm~kPl~~~~-v~GGVWRi~~~p~~~~~lL~~CMh~G-~ki~~~~~~~  287 (339)
T KOG0280|consen  211 SGVVSIYSSPPKPTYIATG-SYDECIRVLDTRNMGKPLFKAK-VGGGVWRIKHHPEIFHRLLAACMHNG-AKILDSSDKV  287 (339)
T ss_pred             cceEEEecCCCCCceEEEe-ccccceeeeehhcccCccccCc-cccceEEEEecchhhhHHHHHHHhcC-ceEEEecccc
Confidence            88999988875 4567777 9999999999985 44444332 34778888872    33444444444 6666666543


Q ss_pred             cc----ceeeecCCccEEEEEEccCCcEEEEEe--cCeEE-EEECCCC
Q psy14511        316 DY----PTAITREGDVVCGLKWSPNGRYLASGS--NNTVK-IWDFRQL  356 (488)
Q Consensus       316 ~~----~~~~~~~~~~i~~~~~s~~~~~l~~~~--d~~i~-iwd~~~~  356 (488)
                      ..    ......|.+-...-.|.....+||+|+  |+.++ +|-.-++
T Consensus       288 ~e~~~~~~s~~~hdSl~YG~DWd~~~~~lATCsFYDk~~~~~Wl~~t~  335 (339)
T KOG0280|consen  288 LEFQIVLPSDKIHDSLCYGGDWDSKDSFLATCSFYDKKIRQLWLHITG  335 (339)
T ss_pred             cchheeeeccccccceeeccccccccceeeeeeccccceeeeeeeccC
Confidence            22    233445665556666654456788877  55544 6654433

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.19  E-value=3.3e-08  Score=100.54  Aligned_cols=226  Identities=10%  Similarity=0.093  Sum_probs=146.8

Q ss_pred             CCcEEEE-ECCCeEEEEECCCCceEEEEecCCC-----------CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcce
Q psy14511        208 YHDTLAV-ALDTSVYTWNTKTNKTQLLVEYPTY-----------DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEER  275 (488)
Q Consensus       208 ~~~~~~~-~~d~~v~iw~~~~~~~~~~~~~~~~-----------~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~  275 (488)
                      ++.++++ ...+.|+++|..... ...+...+.           .-.....++++++++.|+++-...+.|+.+|..++.
T Consensus       579 ~g~lyVaDs~n~rI~v~d~~G~~-i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~Ir~id~~~~~  657 (1057)
T PLN02919        579 NNRLFISDSNHNRIVVTDLDGNF-IVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNET  657 (1057)
T ss_pred             CCeEEEEECCCCeEEEEeCCCCE-EEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCceEEEEecCCCE
Confidence            3445554 478889999986543 322221110           112467899999988887774566789999987754


Q ss_pred             eeeeeccc-----------------cccEEEEEe---cCCEEEEeecCCeEEEEECcCCCccceeeec------------
Q psy14511        276 LIQKLRTH-----------------MHQVIAMCW---NGNLLSCGTIGGNILHYDVRTHSDYPTAITR------------  323 (488)
Q Consensus       276 ~~~~~~~~-----------------~~~v~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~------------  323 (488)
                       +.++.+.                 -.....+++   ++.++++...++.|++||..++..  ..+.+            
T Consensus       658 -V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v--~~~~G~G~~~~~~g~~~  734 (1057)
T PLN02919        658 -VRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVT--RVFSGDGYERNLNGSSG  734 (1057)
T ss_pred             -EEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeE--EEEecCCccccCCCCcc
Confidence             3332110                 012245666   345667777889999999876431  11110            


Q ss_pred             ---CCccEEEEEEccCCcEEEEEe-c-CeEEEEECCCCCCCcc-------------------------cce-eeeeecCC
Q psy14511        324 ---EGDVVCGLKWSPNGRYLASGS-N-NTVKIWDFRQLDAKRP-------------------------LGL-IVPKLKRE  372 (488)
Q Consensus       324 ---~~~~i~~~~~s~~~~~l~~~~-d-~~i~iwd~~~~~~~~~-------------------------~~~-~~~~~~~~  372 (488)
                         .-.....++++|+++.|+++. + +.|++||+.++.....                         +.. .-.+++++
T Consensus       735 ~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~d  814 (1057)
T PLN02919        735 TSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKD  814 (1057)
T ss_pred             ccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCC
Confidence               112356799999998666665 4 9999999886532100                         000 11178889


Q ss_pred             CCEEEEEccCCCCeEEEEeCCCcceeEEEe-------------eccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCc
Q psy14511        373 GRELVTSHGKQDCSLKMWEYPRLHLIEELK-------------IHQERILSAVLSPDQTCVAAASADETISIWNCFPRDK  439 (488)
Q Consensus       373 ~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~-------------~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~  439 (488)
                      |+.+++  ...++.|++||..++.......             +.-.....++++++|+.+++-+.++.|++||+.+++.
T Consensus       815 G~LYVA--Ds~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~~~~  892 (1057)
T PLN02919        815 GQIYVA--DSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLNKGEA  892 (1057)
T ss_pred             CcEEEE--ECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEECCCCcc
Confidence            987666  6779999999998776543221             1123577899999999999988999999999998765

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=99.16  E-value=2.1e-07  Score=85.56  Aligned_cols=309  Identities=12%  Similarity=0.024  Sum_probs=164.9

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccceeecccC-ceEE-----EEEEcc--CCcEEEEec-CCeEEEEeccccCcCCCcc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITREG-DVVC-----GLKWSP--NGRYLASGS-NNTVKIWDFRQLDAKRPQV   74 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~-~~V~-----~l~~sp--~g~~las~~-d~~i~vwd~~~~~~~~~~~   74 (488)
                      .+..+.+++.+|.+.-+|..+++.+-+.-.... ....     .+.-+|  ++..+..++ ++.+..+|.++++..-...
T Consensus        68 ~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~  147 (394)
T PRK11138         68 AYNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTVAGGKVYIGSEKGQVYALNAEDGEVAWQTK  147 (394)
T ss_pred             ECCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEEECCEEEEEcCCCEEEEEECCCCCCccccc
Confidence            345666677789999999998885533211110 0000     001111  234444454 8999999998876543322


Q ss_pred             cccccccceeE-EEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeec
Q psy14511         75 NNQCHLSAVKA-IAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEI  153 (488)
Q Consensus        75 ~~~~h~~~v~~-l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (488)
                      . .   +.+.+ .... ++ .+++...   ++.+..+|..+|+.+...........     ...                
T Consensus       148 ~-~---~~~~ssP~v~-~~-~v~v~~~---~g~l~ald~~tG~~~W~~~~~~~~~~-----~~~----------------  197 (394)
T PRK11138        148 V-A---GEALSRPVVS-DG-LVLVHTS---NGMLQALNESDGAVKWTVNLDVPSLT-----LRG----------------  197 (394)
T ss_pred             C-C---CceecCCEEE-CC-EEEEECC---CCEEEEEEccCCCEeeeecCCCCccc-----ccC----------------
Confidence            1 1   11111 1111 33 4555554   89999999999998766643211000     000                


Q ss_pred             cccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEE
Q psy14511        154 DRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLL  233 (488)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~  233 (488)
                                                                    . .......+.++.+..++.+..+|..+++..-.
T Consensus       198 ----------------------------------------------~-~sP~v~~~~v~~~~~~g~v~a~d~~~G~~~W~  230 (394)
T PRK11138        198 ----------------------------------------------E-SAPATAFGGAIVGGDNGRVSAVLMEQGQLIWQ  230 (394)
T ss_pred             ----------------------------------------------C-CCCEEECCEEEEEcCCCEEEEEEccCChhhhe
Confidence                                                          0 00000124567777888899899888876544


Q ss_pred             EecCCCCC-C---ceEEEEEcC--CCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEecCCEEEEeecCCeEE
Q psy14511        234 VEYPTYDN-A---YISCVAWKP--RTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNIL  307 (488)
Q Consensus       234 ~~~~~~~~-~---~i~~~~~~~--~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~  307 (488)
                      .....+.. .   ....+..+|  .+..++++ +.+|.+..+|..+++.+.....  .....+...+..++.++.+|.++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~-~~~g~l~ald~~tG~~~W~~~~--~~~~~~~~~~~~vy~~~~~g~l~  307 (394)
T PRK11138        231 QRISQPTGATEIDRLVDVDTTPVVVGGVVYAL-AYNGNLVALDLRSGQIVWKREY--GSVNDFAVDGGRIYLVDQNDRVY  307 (394)
T ss_pred             eccccCCCccchhcccccCCCcEEECCEEEEE-EcCCeEEEEECCCCCEEEeecC--CCccCcEEECCEEEEEcCCCeEE
Confidence            33211000 0   001111122  24566666 6889999999999877655432  11223445677888888899999


Q ss_pred             EEECcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeE
Q psy14511        308 HYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSL  387 (488)
Q Consensus       308 i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i  387 (488)
                      .+|..+++..-..-........+...                                      .+..+++  +..+|.+
T Consensus       308 ald~~tG~~~W~~~~~~~~~~~sp~v--------------------------------------~~g~l~v--~~~~G~l  347 (394)
T PRK11138        308 ALDTRGGVELWSQSDLLHRLLTAPVL--------------------------------------YNGYLVV--GDSEGYL  347 (394)
T ss_pred             EEECCCCcEEEcccccCCCcccCCEE--------------------------------------ECCEEEE--EeCCCEE
Confidence            99988764211110000000000000                                      0122222  3456667


Q ss_pred             EEEeCCCcceeEEEeeccccEEE-EEEcCCCCEEEEEeCCCcEEEEec
Q psy14511        388 KMWEYPRLHLIEELKIHQERILS-AVLSPDQTCVAAASADETISIWNC  434 (488)
Q Consensus       388 ~i~d~~~~~~~~~~~~~~~~v~~-~~~s~~~~~l~t~~~dg~v~iw~~  434 (488)
                      +.+|..+|+.+...+-....+.+ ..+  .+..|+.++.||.|+.++.
T Consensus       348 ~~ld~~tG~~~~~~~~~~~~~~s~P~~--~~~~l~v~t~~G~l~~~~~  393 (394)
T PRK11138        348 HWINREDGRFVAQQKVDSSGFLSEPVV--ADDKLLIQARDGTVYAITR  393 (394)
T ss_pred             EEEECCCCCEEEEEEcCCCcceeCCEE--ECCEEEEEeCCceEEEEeC
Confidence            77777777766655433222221 222  3457888899999988764

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.16  E-value=5.5e-08  Score=98.95  Aligned_cols=247  Identities=15%  Similarity=0.181  Sum_probs=145.8

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccceeec-c------------cCceEEEEEEccCCcEEEEec--CCeEEEEeccccC
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYPTAIT-R------------EGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLD   68 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~-~------------h~~~V~~l~~sp~g~~las~~--d~~i~vwd~~~~~   68 (488)
                      +|+++++-+.++.|++||..... +...-. +            +-..-..++++++++.|..+.  ++.|+++|..++.
T Consensus       579 ~g~lyVaDs~n~rI~v~d~~G~~-i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~Ir~id~~~~~  657 (1057)
T PLN02919        579 NNRLFISDSNHNRIVVTDLDGNF-IVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNET  657 (1057)
T ss_pred             CCeEEEEECCCCeEEEEeCCCCE-EEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCceEEEEecCCCE
Confidence            46677777788899999976432 211111 1            112357899999988776665  6889999986532


Q ss_pred             cCCCccc-------ccc-------cccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCcccccccc
Q psy14511         69 AKRPQVN-------NQC-------HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETIS  134 (488)
Q Consensus        69 ~~~~~~~-------~~~-------h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~  134 (488)
                      .. .+..       ..+       .-.....++|+|++..++++...  ++.|++||..++... .+.+.          
T Consensus       658 V~-tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~--~~~I~v~d~~~g~v~-~~~G~----------  723 (1057)
T PLN02919        658 VR-TLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAG--QHQIWEYNISDGVTR-VFSGD----------  723 (1057)
T ss_pred             EE-EEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECC--CCeEEEEECCCCeEE-EEecC----------
Confidence            11 1100       000       01234689999966566666553  889999998766431 11100          


Q ss_pred             ccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEE
Q psy14511        135 YREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAV  214 (488)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (488)
                                                                                                      
T Consensus       724 --------------------------------------------------------------------------------  723 (1057)
T PLN02919        724 --------------------------------------------------------------------------------  723 (1057)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeec-------------
Q psy14511        215 ALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLR-------------  281 (488)
Q Consensus       215 ~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~-------------  281 (488)
                         |.....+   +......     .-.....++++|+++.|+++.+.++.|++||+.++.......             
T Consensus       724 ---G~~~~~~---g~~~~~~-----~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG  792 (1057)
T PLN02919        724 ---GYERNLN---GSSGTST-----SFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFG  792 (1057)
T ss_pred             ---CccccCC---CCccccc-----cccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCccccccc
Confidence               0000000   0000000     112356788888887666665677888888877643211100             


Q ss_pred             cc--------cccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeee--------------cCCccEEEEEEccCC
Q psy14511        282 TH--------MHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAIT--------------REGDVVCGLKWSPNG  337 (488)
Q Consensus       282 ~~--------~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--------------~~~~~i~~~~~s~~~  337 (488)
                      ..        -.....+++  +|+++++-..++.|++||..++. . ..+.              ..-.....++++++|
T Consensus       793 ~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~-v-~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG  870 (1057)
T PLN02919        793 DHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKR-V-TTLAGTGKAGFKDGKALKAQLSEPAGLALGENG  870 (1057)
T ss_pred             CCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCe-E-EEEeccCCcCCCCCcccccccCCceEEEEeCCC
Confidence            00        011235555  67888888899999999987643 1 1111              112346789999999


Q ss_pred             cEEEEEe-cCeEEEEECCCCCC
Q psy14511        338 RYLASGS-NNTVKIWDFRQLDA  358 (488)
Q Consensus       338 ~~l~~~~-d~~i~iwd~~~~~~  358 (488)
                      +.+++-+ ++.|++||+.+.+.
T Consensus       871 ~lyVaDt~Nn~Irvid~~~~~~  892 (1057)
T PLN02919        871 RLFVADTNNSLIRYLDLNKGEA  892 (1057)
T ss_pred             CEEEEECCCCEEEEEECCCCcc
Confidence            9777766 49999999988654

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=99.15  E-value=3.6e-09  Score=86.42  Aligned_cols=149  Identities=17%  Similarity=0.270  Sum_probs=100.1

Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCccee---eeeecccc-----ccEEEEEe---cCCEEEEeecCCeEEE
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERL---IQKLRTHM-----HQVIAMCW---NGNLLSCGTIGGNILH  308 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~---~~~~~~~~-----~~v~~~~~---~~~~l~~~~~dg~i~i  308 (488)
                      |...|.++.|+.|...++++  .|-.|.+|++.-...   +..++.|.     .-|++..|   ..+.+.-.+..|.|++
T Consensus       171 H~yhiNSiS~NsD~et~lSa--DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl  248 (460)
T COG5170         171 HPYHINSISFNSDKETLLSA--DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKL  248 (460)
T ss_pred             ceeEeeeeeecCchheeeec--cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEe
Confidence            77889999999998888776  788999998764321   22222222     23555566   3467777888999999


Q ss_pred             EECcCCCccc---------------eeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcc-c----------
Q psy14511        309 YDVRTHSDYP---------------TAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRP-L----------  362 (488)
Q Consensus       309 ~d~~~~~~~~---------------~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~-~----------  362 (488)
                      -|++....+.               ..+.+-...|..+.|+++|+++++-+--+++|||.+..+.+.. +          
T Consensus       249 ~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdyltvkiwDvnm~k~pikTi~~h~~l~~~l  328 (460)
T COG5170         249 NDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDYLTVKIWDVNMAKNPIKTIPMHCDLMDEL  328 (460)
T ss_pred             hhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEeccceEEEEecccccCCceeechHHHHHHHH
Confidence            9998532111               1112223568889999999999887669999999986543211 1          


Q ss_pred             ----------ceeeeeecCCCCEEEEEccCCCCeEEEEeC
Q psy14511        363 ----------GLIVPKLKREGRELVTSHGKQDCSLKMWEY  392 (488)
Q Consensus       363 ----------~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~  392 (488)
                                ..+...||.|.+.+++  |+..+..-+|-.
T Consensus       329 ~d~YEnDaifdkFeisfSgd~~~v~s--gsy~NNfgiyp~  366 (460)
T COG5170         329 NDVYENDAIFDKFEISFSGDDKHVLS--GSYSNNFGIYPT  366 (460)
T ss_pred             HhhhhccceeeeEEEEecCCcccccc--cccccceeeecc
Confidence                      1112277888888887  677666666653

>KOG1409|consensus

Probab=99.13  E-value=5.3e-09  Score=86.65  Aligned_cols=253  Identities=17%  Similarity=0.209  Sum_probs=168.6

Q ss_pred             cceeecccCceEEEEEEccCCcEEEEec-CCeEEEEecc-ccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccc
Q psy14511         28 YPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFR-QLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQ  105 (488)
Q Consensus        28 ~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~-~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~  105 (488)
                      +...++||.+.|++...-|-..-+.+.+ |.+++||--. .++....+.  ..-..+++++.+.++...|+ ++-.  .|
T Consensus        16 ll~~~eG~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~wpsI~--~~mP~~~~~~~y~~e~~~L~-vg~~--ng   90 (404)
T KOG1409|consen   16 LLSKIEGSQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQYWPSIY--HYMPSPCSAMEYVSESRRLY-VGQD--NG   90 (404)
T ss_pred             hhhhhcCchhhhhhheeccCCCCeEEccccceeeeEEeccccccCchhh--hhCCCCceEeeeeccceEEE-EEEe--cc
Confidence            3456789999999999999888888888 9999999643 333333332  22356889999999876544 4442  67


Q ss_pred             eEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCC
Q psy14511        106 TVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAK  185 (488)
Q Consensus       106 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (488)
                      ++.-+.+...-.                                                                    
T Consensus        91 tvtefs~sedfn--------------------------------------------------------------------  102 (404)
T KOG1409|consen   91 TVTEFALSEDFN--------------------------------------------------------------------  102 (404)
T ss_pred             eEEEEEhhhhhh--------------------------------------------------------------------
Confidence            766555432110                                                                    


Q ss_pred             CceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCc
Q psy14511        186 PERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEY  265 (488)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~  265 (488)
                                                               .....+  .... |...+..+-|+....++++. +.|..
T Consensus       103 -----------------------------------------km~~~r--~~~~-h~~~v~~~if~~~~e~V~s~-~~dk~  137 (404)
T KOG1409|consen  103 -----------------------------------------KMTFLK--DYLA-HQARVSAIVFSLTHEWVLST-GKDKQ  137 (404)
T ss_pred             -----------------------------------------hcchhh--hhhh-hhcceeeEEecCCceeEEEe-ccccc
Confidence                                                     000000  1111 77788888888888888888 78877


Q ss_pred             EEEEECCcceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCC-ccceeeecCCccEEEEEEccCCcEEEEEe
Q psy14511        266 IDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHS-DYPTAITREGDVVCGLKWSPNGRYLASGS  344 (488)
Q Consensus       266 i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~  344 (488)
                      +.---.+.+..+..+. .....+++.+|-.+...|...|.+..-.+.... .+...+.+|...+.+++|.|..+.|.++.
T Consensus       138 ~~~hc~e~~~~lg~Y~-~~~~~t~~~~d~~~~fvGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~  216 (404)
T KOG1409|consen  138 FAWHCTESGNRLGGYN-FETPASALQFDALYAFVGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGA  216 (404)
T ss_pred             eEEEeeccCCcccceE-eeccCCCCceeeEEEEecccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEecc
Confidence            6544444433332221 011112222222255666667777666554322 46777889999999999999998998887


Q ss_pred             -cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEE
Q psy14511        345 -NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAA  423 (488)
Q Consensus       345 -d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~  423 (488)
                       |..+.+||+--.                                      .....++.+|...|..+...+--+.|.++
T Consensus       217 ~d~~vi~wdigg~--------------------------------------~g~~~el~gh~~kV~~l~~~~~t~~l~S~  258 (404)
T KOG1409|consen  217 SDHSVIMWDIGGR--------------------------------------KGTAYELQGHNDKVQALSYAQHTRQLISC  258 (404)
T ss_pred             ccCceEEEeccCC--------------------------------------cceeeeeccchhhhhhhhhhhhheeeeec
Confidence             577888887522                                      11235678899999999999989999999


Q ss_pred             eCCCcEEEEecCCC
Q psy14511        424 SADETISIWNCFPR  437 (488)
Q Consensus       424 ~~dg~v~iw~~~~~  437 (488)
                      +.||.|.+|+++..
T Consensus       259 ~edg~i~~w~mn~~  272 (404)
T KOG1409|consen  259 GEDGGIVVWNMNVK  272 (404)
T ss_pred             cCCCeEEEEeccce
Confidence            99999999998744

>PRK04043 tolB translocation protein TolB; Provisional

Probab=99.06  E-value=1.5e-07  Score=86.05  Aligned_cols=213  Identities=9%  Similarity=0.025  Sum_probs=119.6

Q ss_pred             CeEEEEEcccCcccceeecccCceEEEEEEccCCcE-EEEec----CCeEEEEeccccCcCCCcccccccccceeEEEEe
Q psy14511         15 GNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRY-LASGS----NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWC   89 (488)
Q Consensus        15 g~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~-las~~----d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~   89 (488)
                      ..|.+-|..... . +.+.... ......|||||+. ++..+    +..|.++|+.+++.. .+..   ..+......|+
T Consensus       169 ~~l~~~d~dg~~-~-~~~~~~~-~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~-~lt~---~~g~~~~~~~S  241 (419)
T PRK04043        169 SNIVLADYTLTY-Q-KVIVKGG-LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKE-KIAS---SQGMLVVSDVS  241 (419)
T ss_pred             ceEEEECCCCCc-e-eEEccCC-CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEE-EEec---CCCcEEeeEEC
Confidence            356665654443 2 3233333 7788999999985 66544    467999999876533 2322   33455667899


Q ss_pred             cCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccce
Q psy14511         90 PWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPT  169 (488)
Q Consensus        90 ~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (488)
                      |||+.++.+.....+..|.++|+.+++... +...........+++                                  
T Consensus       242 PDG~~la~~~~~~g~~~Iy~~dl~~g~~~~-LT~~~~~d~~p~~SP----------------------------------  286 (419)
T PRK04043        242 KDGSKLLLTMAPKGQPDIYLYDTNTKTLTQ-ITNYPGIDVNGNFVE----------------------------------  286 (419)
T ss_pred             CCCCEEEEEEccCCCcEEEEEECCCCcEEE-cccCCCccCccEECC----------------------------------
Confidence            999988876654235677788887765332 221111000111111                                  


Q ss_pred             eeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEE---CCCeEEEEECCCCceEEEEecCCCCCCceEE
Q psy14511        170 QFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVA---LDTSVYTWNTKTNKTQLLVEYPTYDNAYISC  246 (488)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~  246 (488)
                                                           ++..++..+   ....|++.|+.+++...+... + .  .  .
T Consensus       287 -------------------------------------DG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~-g-~--~--~  323 (419)
T PRK04043        287 -------------------------------------DDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVFH-G-K--N--N  323 (419)
T ss_pred             -------------------------------------CCCEEEEEECCCCCceEEEEECCCCCeEeCccC-C-C--c--C
Confidence                                                 112333333   123788889988876544321 2 1  1  2


Q ss_pred             EEEcCCCCeEEEEeCCC--------CcEEEEECCcceeeeeeccc-cccEEEEEecCCEEEEeecC-C--eEEEEECcC
Q psy14511        247 VAWKPRTTDLAVTNTCT--------EYIDLWHEQEERLIQKLRTH-MHQVIAMCWNGNLLSCGTIG-G--NILHYDVRT  313 (488)
Q Consensus       247 ~~~~~~~~~l~~~~~~~--------~~i~i~d~~~~~~~~~~~~~-~~~v~~~~~~~~~l~~~~~d-g--~i~i~d~~~  313 (488)
                      ..|+|+|+.++......        ..|.+.|+.++.. ..+... ...-...+.||+.++....+ +  .+.+.++..
T Consensus       324 ~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~-~~LT~~~~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l~g  401 (419)
T PRK04043        324 SSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYI-RRLTANGVNQFPRFSSDGGSIMFIKYLGNQSALGIIRLNY  401 (419)
T ss_pred             ceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCe-EECCCCCCcCCeEECCCCCEEEEEEccCCcEEEEEEecCC
Confidence            48999999998883332        3678888877654 333322 11223334488877665543 2  355556544

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=99.06  E-value=5.5e-09  Score=85.38  Aligned_cols=113  Identities=15%  Similarity=0.212  Sum_probs=76.6

Q ss_pred             CceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceee------e----------eeccccccEEEEEe--cCCEEEEeecC
Q psy14511        242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLI------Q----------KLRTHMHQVIAMCW--NGNLLSCGTIG  303 (488)
Q Consensus       242 ~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~------~----------~~~~~~~~v~~~~~--~~~~l~~~~~d  303 (488)
                      .-|++..|+|....++.-++..|.|++-|++.....      .          -+.+-...|..+.|  +|+++++-+ -
T Consensus       222 eVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRd-y  300 (460)
T COG5170         222 EVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRD-Y  300 (460)
T ss_pred             HHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEec-c
Confidence            357888999976554444389999999999843211      0          11223345677778  567776654 3


Q ss_pred             CeEEEEECcCCCccceeeecCC------------ccE---EEEEEccCCcEEEEEe-cCeEEEEECCC
Q psy14511        304 GNILHYDVRTHSDYPTAITREG------------DVV---CGLKWSPNGRYLASGS-NNTVKIWDFRQ  355 (488)
Q Consensus       304 g~i~i~d~~~~~~~~~~~~~~~------------~~i---~~~~~s~~~~~l~~~~-d~~i~iwd~~~  355 (488)
                      -++++||.+..+.++.++.-|.            +.|   ..+.||-|.+.+.+|+ .+..-+|-..+
T Consensus       301 ltvkiwDvnm~k~pikTi~~h~~l~~~l~d~YEnDaifdkFeisfSgd~~~v~sgsy~NNfgiyp~~s  368 (460)
T COG5170         301 LTVKIWDVNMAKNPIKTIPMHCDLMDELNDVYENDAIFDKFEISFSGDDKHVLSGSYSNNFGIYPTDS  368 (460)
T ss_pred             ceEEEEecccccCCceeechHHHHHHHHHhhhhccceeeeEEEEecCCcccccccccccceeeecccc
Confidence            5799999998888887775543            222   3578888999999998 47777776443

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=99.02  E-value=1.2e-09  Score=62.78  Aligned_cols=39  Identities=31%  Similarity=0.499  Sum_probs=37.0

Q ss_pred             cceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEe
Q psy14511        395 LHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWN  433 (488)
Q Consensus       395 ~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~  433 (488)
                      ++++.++.+|.++|++++|+|++++|++++.|+.|++||
T Consensus         1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            467889999999999999999999999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=99.01  E-value=1.8e-06  Score=73.78  Aligned_cols=299  Identities=13%  Similarity=0.082  Sum_probs=156.8

Q ss_pred             CeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-----------CCeEEEEeccccCcCCCcccccccc---
Q psy14511         15 GNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-----------NNTVKIWDFRQLDAKRPQVNNQCHL---   80 (488)
Q Consensus        15 g~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-----------d~~i~vwd~~~~~~~~~~~~~~~h~---   80 (488)
                      +.+.|+|..+++.+..+-.+....   +..|||++.+.+++           .-.|.+||..+......+.....|.   
T Consensus        17 ~rv~viD~d~~k~lGmi~~g~~~~---~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~   93 (342)
T PF06433_consen   17 SRVYVIDADSGKLLGMIDTGFLGN---VALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQV   93 (342)
T ss_dssp             EEEEEEETTTTEEEEEEEEESSEE---EEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--B
T ss_pred             ceEEEEECCCCcEEEEeecccCCc---eeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchhee
Confidence            589999999888655544455443   56899999888754           2479999998854333332222211   


Q ss_pred             -cceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeecccccee
Q psy14511         81 -SAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVL  159 (488)
Q Consensus        81 -~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (488)
                       .....++++.|++++++..-. .-..|.|-|+..++.+.++....-                                 
T Consensus        94 ~~~~~~~~ls~dgk~~~V~N~T-Pa~SVtVVDl~~~kvv~ei~~PGC---------------------------------  139 (342)
T PF06433_consen   94 VPYKNMFALSADGKFLYVQNFT-PATSVTVVDLAAKKVVGEIDTPGC---------------------------------  139 (342)
T ss_dssp             S--GGGEEE-TTSSEEEEEEES-SSEEEEEEETTTTEEEEEEEGTSE---------------------------------
T ss_pred             cccccceEEccCCcEEEEEccC-CCCeEEEEECCCCceeeeecCCCE---------------------------------
Confidence             123456788999888776543 467899999988887776655411                                 


Q ss_pred             ccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECC-CCceEEEEe-cC
Q psy14511        160 NQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTK-TNKTQLLVE-YP  237 (488)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~-~~~~~~~~~-~~  237 (488)
                                                               .....+.+..+.+.|.||.+....+. .|+...... ..
T Consensus       140 -----------------------------------------~~iyP~~~~~F~~lC~DGsl~~v~Ld~~Gk~~~~~t~~F  178 (342)
T PF06433_consen  140 -----------------------------------------WLIYPSGNRGFSMLCGDGSLLTVTLDADGKEAQKSTKVF  178 (342)
T ss_dssp             -----------------------------------------EEEEEEETTEEEEEETTSCEEEEEETSTSSEEEEEEEES
T ss_pred             -----------------------------------------EEEEecCCCceEEEecCCceEEEEECCCCCEeEeecccc
Confidence                                                     00011224568888999999888887 444432111 10


Q ss_pred             CCCCCce-EEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCc
Q psy14511        238 TYDNAYI-SCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSD  316 (488)
Q Consensus       238 ~~~~~~i-~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~  316 (488)
                      .....++ ..-++...+..++.. +.+|.|+-.|+......                     .      ..-|.+-+...
T Consensus       179 ~~~~dp~f~~~~~~~~~~~~~F~-Sy~G~v~~~dlsg~~~~---------------------~------~~~~~~~t~~e  230 (342)
T PF06433_consen  179 DPDDDPLFEHPAYSRDGGRLYFV-SYEGNVYSADLSGDSAK---------------------F------GKPWSLLTDAE  230 (342)
T ss_dssp             STTTS-B-S--EEETTTTEEEEE-BTTSEEEEEEETTSSEE---------------------E------EEEEESS-HHH
T ss_pred             CCCCcccccccceECCCCeEEEE-ecCCEEEEEeccCCccc---------------------c------cCcccccCccc
Confidence            0011111 122233333333333 45555555444332110                     0      12233322110


Q ss_pred             cceeeecCCccEEEEEEccCCcEEEEEe-c-CeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCC--CCeEEEEeC
Q psy14511        317 YPTAITREGDVVCGLKWSPNGRYLASGS-N-NTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQ--DCSLKMWEY  392 (488)
Q Consensus       317 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~--~~~i~i~d~  392 (488)
                      ..            -.|-|.|-.+++.. . +.+.+.= ..+.. .                    .-.  ...|-++|+
T Consensus       231 ~~------------~~WrPGG~Q~~A~~~~~~rlyvLM-h~g~~-g--------------------sHKdpgteVWv~D~  276 (342)
T PF06433_consen  231 KA------------DGWRPGGWQLIAYHAASGRLYVLM-HQGGE-G--------------------SHKDPGTEVWVYDL  276 (342)
T ss_dssp             HH------------TTEEE-SSS-EEEETTTTEEEEEE-EE--T-T---------------------TTS-EEEEEEEET
T ss_pred             cc------------cCcCCcceeeeeeccccCeEEEEe-cCCCC-C--------------------CccCCceEEEEEEC
Confidence            00            02333333322222 1 3333221 11100 0                    011  224777899


Q ss_pred             CCcceeEEEeeccccEEEEEEcCCCC-EEEEE-eCCCcEEEEecCCCCccccccccCCcceEEe
Q psy14511        393 PRLHLIEELKIHQERILSAVLSPDQT-CVAAA-SADETISIWNCFPRDKKRKARQVGSGSSLEF  454 (488)
Q Consensus       393 ~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~t~-~~dg~v~iw~~~~~~~~~~~~~~~~v~~~~~  454 (488)
                      .+++.+.++.. ..++.+++.+.|.+ +|.+. ..++.+.+||..+++.......-+.-..+..
T Consensus       277 ~t~krv~Ri~l-~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~~lG~~~~l~~  339 (342)
T PF06433_consen  277 KTHKRVARIPL-EHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIEQLGETPTLIL  339 (342)
T ss_dssp             TTTEEEEEEEE-EEEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE---SSS--EEE
T ss_pred             CCCeEEEEEeC-CCccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehhccCCCceEEE
Confidence            99999988874 34678999999876 66554 4589999999999998876665555544443

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>KOG3914|consensus

Probab=98.99  E-value=1.3e-08  Score=86.23  Aligned_cols=76  Identities=16%  Similarity=0.138  Sum_probs=66.8

Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeec-cccccEEEEEe-cCCEEEEeecCCeEEEEECcCCCc
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLR-THMHQVIAMCW-NGNLLSCGTIGGNILHYDVRTHSD  316 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~-~~~~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~  316 (488)
                      |-..++.++++||++.++++ ..|..|++-.....-.+..+. +|..-|..++. ++..|++++.|+++++||+.+++.
T Consensus       150 hvSml~dVavS~D~~~Iita-DRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~~~LlS~sGD~tlr~Wd~~sgk~  227 (390)
T KOG3914|consen  150 HVSMLLDVAVSPDDQFIITA-DRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDNYLLLSGSGDKTLRLWDITSGKL  227 (390)
T ss_pred             hhhhhheeeecCCCCEEEEe-cCCceEEEEecCcccchhhhccccHhheeeeeeccCceeeecCCCCcEEEEecccCCc
Confidence            78889999999999999999 999999998877655555553 69999999999 788899999999999999999864

>KOG0882|consensus

Probab=98.96  E-value=9.3e-08  Score=82.40  Aligned_cols=290  Identities=11%  Similarity=0.135  Sum_probs=187.6

Q ss_pred             cCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecC
Q psy14511         35 EGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSM  113 (488)
Q Consensus        35 h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~  113 (488)
                      |.+.|+.+.-+ -.+++.+++ ||.++.|.-.......-+..+..|.+.|.+++.+-++..+.+.+.  .|..++++|++
T Consensus         8 hrd~i~hv~~t-ka~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d--~Dhs~KvfDvE   84 (558)
T KOG0882|consen    8 HRDVITHVFPT-KAKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVED--PDHSVKVFDVE   84 (558)
T ss_pred             ccceeeeEeee-hhheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccC--cccceeEEEee
Confidence            77777776544 467999999 999999986532334445556779999999999999854444444  38999999998


Q ss_pred             CCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCC
Q psy14511        114 NGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAP  193 (488)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (488)
                      +-..+.-++....+....                                                              
T Consensus        85 n~DminmiKL~~lPg~a~--------------------------------------------------------------  102 (558)
T KOG0882|consen   85 NFDMINMIKLVDLPGFAE--------------------------------------------------------------  102 (558)
T ss_pred             ccchhhhcccccCCCceE--------------------------------------------------------------
Confidence            765443333221110000                                                              


Q ss_pred             CccccceeeeeeeCCC---cEEEEE--CCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEE
Q psy14511        194 SIINDFYTSGLDWGYH---DTLAVA--LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDL  268 (488)
Q Consensus       194 ~~~~~~~~~~~~~~~~---~~~~~~--~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i  268 (488)
                                +..+++   .+++++  .++.+.++|-....+.....-.- |..+|.++.+++.+..+++. ...|.|..
T Consensus       103 ----------wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkkl-H~sPV~~i~y~qa~Ds~vSi-D~~gmVEy  170 (558)
T KOG0882|consen  103 ----------WVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKL-HFSPVKKIRYNQAGDSAVSI-DISGMVEY  170 (558)
T ss_pred             ----------EecCCCCeeeeEEeecccCCCcEEECCcCCcCccceeccc-ccCceEEEEeeccccceeec-cccceeEe
Confidence                      000111   244444  68899999977665443333333 89999999999999998888 88999999


Q ss_pred             EECCcceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCe
Q psy14511        269 WHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNT  347 (488)
Q Consensus       269 ~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~  347 (488)
                      |....  ..+..+      ..+                 .|.+... ..+..+........++.|+|+|..+++-+ |..
T Consensus       171 Ws~e~--~~qfPr------~~l-----------------~~~~K~e-TdLy~f~K~Kt~pts~Efsp~g~qistl~~Drk  224 (558)
T KOG0882|consen  171 WSAEG--PFQFPR------TNL-----------------NFELKHE-TDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRK  224 (558)
T ss_pred             ecCCC--cccCcc------ccc-----------------ccccccc-chhhcccccccCccceEEccccCcccccCcccE
Confidence            98763  111111      001                 1233222 12222333344567899999999999888 699


Q ss_pred             EEEEECCCCCCCccccee--------------------------------------eeeecCCCCEEEEEccCCCCeEEE
Q psy14511        348 VKIWDFRQLDAKRPLGLI--------------------------------------VPKLKREGRELVTSHGKQDCSLKM  389 (488)
Q Consensus       348 i~iwd~~~~~~~~~~~~~--------------------------------------~~~~~~~~~~l~~~~g~~~~~i~i  389 (488)
                      |+++++++++..+.+...                                      ...|...|++|+.  |.. =.|++
T Consensus       225 VR~F~~KtGklvqeiDE~~t~~~~q~ks~y~l~~VelgRRmaverelek~~~~~~~~~~fdes~~flly--~t~-~gikv  301 (558)
T KOG0882|consen  225 VRGFVFKTGKLVQEIDEVLTDAQYQPKSPYGLMHVELGRRMAVERELEKHGSTVGTNAVFDESGNFLLY--GTI-LGIKV  301 (558)
T ss_pred             EEEEEeccchhhhhhhccchhhhhccccccccceeehhhhhhHHhhHhhhcCcccceeEEcCCCCEEEe--ecc-eeEEE
Confidence            999999988765544332                                      1188888999988  333 33899


Q ss_pred             EeCCCcceeEEEeec---------------------------cccEEEEEEcCCCCEEEEEeCCCcEEEE
Q psy14511        390 WEYPRLHLIEELKIH---------------------------QERILSAVLSPDQTCVAAASADETISIW  432 (488)
Q Consensus       390 ~d~~~~~~~~~~~~~---------------------------~~~v~~~~~s~~~~~l~t~~~dg~v~iw  432 (488)
                      .++.++++++.+...                           .++  .+.+-+|...++++-.-..++++
T Consensus       302 in~~tn~v~ri~gk~e~ir~~~~sl~q~~~k~~~~~~~~~a~~np--~~~~~~dpt~~c~a~kk~rfylf  369 (558)
T KOG0882|consen  302 INLDTNTVVRILGKDEAIRFTRLSLYQGAQKSNLAALEVAASNNP--LLEFQKDPTIVCTAFKKNRFYLF  369 (558)
T ss_pred             EEeecCeEEEEeccchhhhhhhHHHHhhhhhccchhhhhhhccCc--ccccCCCCeEEEeeeecceEEEE
Confidence            999988877665321                           111  12355666677777777778887

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=98.95  E-value=2.6e-06  Score=72.70  Aligned_cols=220  Identities=11%  Similarity=0.012  Sum_probs=129.7

Q ss_pred             CCeEEEEEcccCcccceeeccc-CceEEEEEEccCCcEEEEe-cCCeEEEEeccccCcCCCcccccccccceeEEEEecC
Q psy14511         14 GGNILHYDVRTHSDYPTAITRE-GDVVCGLKWSPNGRYLASG-SNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPW   91 (488)
Q Consensus        14 dg~i~iwd~~~~~~~~~~~~~h-~~~V~~l~~sp~g~~las~-~d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~   91 (488)
                      +|+|..||..+++.+-+.-.+. .....+... +++..+.++ .++.+..||..+++..-.... .   +.+...... +
T Consensus         2 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~-~---~~~~~~~~~-~   75 (238)
T PF13360_consen    2 DGTLSALDPRTGKELWSYDLGPGIGGPVATAV-PDGGRVYVASGDGNLYALDAKTGKVLWRFDL-P---GPISGAPVV-D   75 (238)
T ss_dssp             TSEEEEEETTTTEEEEEEECSSSCSSEEETEE-EETTEEEEEETTSEEEEEETTTSEEEEEEEC-S---SCGGSGEEE-E
T ss_pred             CCEEEEEECCCCCEEEEEECCCCCCCccceEE-EeCCEEEEEcCCCEEEEEECCCCCEEEEeec-c---ccccceeee-c
Confidence            6889999998887654432111 122222233 344555555 599999999988764332221 1   111111222 3


Q ss_pred             CCeEEeeeCCcccceEEEEecCCCeeeeee-ecCCCccccccccccccccceeEEEEEeeeeccccceecccccccccee
Q psy14511         92 EPTLLATGGGICDQTVRLWNSMNGKEKCHV-KTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQ  170 (488)
Q Consensus        92 ~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (488)
                      +..+++...   ++.+..+|..+|+.+... ........ ..                                      
T Consensus        76 ~~~v~v~~~---~~~l~~~d~~tG~~~W~~~~~~~~~~~-~~--------------------------------------  113 (238)
T PF13360_consen   76 GGRVYVGTS---DGSLYALDAKTGKVLWSIYLTSSPPAG-VR--------------------------------------  113 (238)
T ss_dssp             TTEEEEEET---TSEEEEEETTTSCEEEEEEE-SSCTCS-TB--------------------------------------
T ss_pred             ccccccccc---eeeeEecccCCcceeeeeccccccccc-cc--------------------------------------
Confidence            345565555   889999999999987764 32211000 00                                      


Q ss_pred             eecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCC--Cc-----
Q psy14511        171 FLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDN--AY-----  243 (488)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~--~~-----  243 (488)
                                                   ........++.++++..++.|..+|..+|+..-...... ..  ..     
T Consensus       114 -----------------------------~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~-~~~~~~~~~~~  163 (238)
T PF13360_consen  114 -----------------------------SSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGE-PRGSSPISSFS  163 (238)
T ss_dssp             -------------------------------SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESST-T-SS--EEEET
T ss_pred             -----------------------------cccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCC-CCCCcceeeec
Confidence                                         000011224567777789999999999999877776632 12  11     


Q ss_pred             -eEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEE-EEecCCEEEEeecCCeEEEEECcCCC
Q psy14511        244 -ISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIA-MCWNGNLLSCGTIGGNILHYDVRTHS  315 (488)
Q Consensus       244 -i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~-~~~~~~~l~~~~~dg~i~i~d~~~~~  315 (488)
                       +..-....++ .++++ ..++.+..+|..+++.+....  ...... ...++..++.++.++.+..||+++++
T Consensus       164 ~~~~~~~~~~~-~v~~~-~~~g~~~~~d~~tg~~~w~~~--~~~~~~~~~~~~~~l~~~~~~~~l~~~d~~tG~  233 (238)
T PF13360_consen  164 DINGSPVISDG-RVYVS-SGDGRVVAVDLATGEKLWSKP--ISGIYSLPSVDGGTLYVTSSDGRLYALDLKTGK  233 (238)
T ss_dssp             TEEEEEECCTT-EEEEE-CCTSSEEEEETTTTEEEEEEC--SS-ECECEECCCTEEEEEETTTEEEEEETTTTE
T ss_pred             ccccceEEECC-EEEEE-cCCCeEEEEECCCCCEEEEec--CCCccCCceeeCCEEEEEeCCCEEEEEECCCCC
Confidence             1222233344 77777 677754444999998664333  333444 45578888888899999999999875

...

>KOG4532|consensus

Probab=98.93  E-value=3.7e-07  Score=73.36  Aligned_cols=229  Identities=11%  Similarity=0.015  Sum_probs=144.5

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCc-EEEEec-CCeEEEEeccccCcCCCccccccccc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGR-YLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLS   81 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~-~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~   81 (488)
                      ...+||.|+..|...+|...+.+........|...|+-+.=.-|.+ -+.-++ |.++++.+++.+.....     -|..
T Consensus        83 kc~~la~gG~~g~fd~~~~~tn~~h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~~~~-----~h~~  157 (344)
T KOG4532|consen   83 KCVTLADGGASGQFDLFACNTNDGHLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSNKFA-----VHNQ  157 (344)
T ss_pred             cccEEEeccccceeeeecccCcccceeeecccccchhhhhhhcccccceeeccCCcceeEEEEecCcccce-----eecc
Confidence            3458999999999999999987755555555655444333222322 233344 88888888875332222     2443


Q ss_pred             c--eeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeecccccee
Q psy14511         82 A--VKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVL  159 (488)
Q Consensus        82 ~--v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (488)
                      .  +.++++++|++.+.++|.   ...|..|.+.......                                        
T Consensus       158 ~~~~ns~~~snd~~~~~~Vgd---s~~Vf~y~id~~sey~----------------------------------------  194 (344)
T KOG4532|consen  158 NLTQNSLHYSNDPSWGSSVGD---SRRVFRYAIDDESEYI----------------------------------------  194 (344)
T ss_pred             ccceeeeEEcCCCceEEEecC---CCcceEEEeCCcccee----------------------------------------
Confidence            3  889999999998888886   7788888875432100                                        


Q ss_pred             ccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCC
Q psy14511        160 NQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTY  239 (488)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~  239 (488)
                                                                                             ..+...+  
T Consensus       195 -----------------------------------------------------------------------~~~~~a~--  201 (344)
T KOG4532|consen  195 -----------------------------------------------------------------------ENIYEAP--  201 (344)
T ss_pred             -----------------------------------------------------------------------eeeEecc--
Confidence                                                                                   0000000  


Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeee-----eeccccccEEEEEec----CCEEEEeecCCeEEEEE
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQ-----KLRTHMHQVIAMCWN----GNLLSCGTIGGNILHYD  310 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~-----~~~~~~~~v~~~~~~----~~~l~~~~~dg~i~i~d  310 (488)
                      ....-.+..|+.....+|++ ..||++.|||++......     +-..|.+.+..+.|.    -.+|+..-.-+.+.+.|
T Consensus       202 t~D~gF~~S~s~~~~~FAv~-~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D  280 (344)
T KOG4532|consen  202 TSDHGFYNSFSENDLQFAVV-FQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVD  280 (344)
T ss_pred             cCCCceeeeeccCcceEEEE-ecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEE
Confidence            23334577888888899999 999999999998643322     223588889888883    24566655667899999


Q ss_pred             CcCCCccceeee------cCCc-cEEEEEEccCCcEEEEEecCeEEEEECC
Q psy14511        311 VRTHSDYPTAIT------REGD-VVCGLKWSPNGRYLASGSNNTVKIWDFR  354 (488)
Q Consensus       311 ~~~~~~~~~~~~------~~~~-~i~~~~~s~~~~~l~~~~d~~i~iwd~~  354 (488)
                      +++.........      .|.. .|....|+.++.-+.+.++-.+.-|++.
T Consensus       281 ~R~~~~~q~I~i~~d~~~~~~tq~ifgt~f~~~n~s~~v~~e~~~ae~ni~  331 (344)
T KOG4532|consen  281 TRNYVNHQVIVIPDDVERKHNTQHIFGTNFNNENESNDVKNELQGAEYNIL  331 (344)
T ss_pred             cccCceeeEEecCccccccccccccccccccCCCcccccccchhhheeecc
Confidence            998764332221      2222 2666667666665555554344444443

>KOG4190|consensus

Probab=98.91  E-value=1.3e-08  Score=89.90  Aligned_cols=243  Identities=15%  Similarity=0.173  Sum_probs=150.3

Q ss_pred             cEEEEECCCeEEEEECCCC-----ceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeec---
Q psy14511        210 DTLAVALDTSVYTWNTKTN-----KTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLR---  281 (488)
Q Consensus       210 ~~~~~~~d~~v~iw~~~~~-----~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~---  281 (488)
                      .+++++.|.+|++|.++..     .....+++.. |..+|.++.|-.+-++++++   ||.|.+||.--++.+..+.   
T Consensus       749 SFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~a-Hkk~i~~igfL~~lr~i~Sc---D~giHlWDPFigr~Laq~~dap  824 (1034)
T KOG4190|consen  749 SFISASKDKTVKLWSIKPEGDEIGTSACQFTYQA-HKKPIHDIGFLADLRSIASC---DGGIHLWDPFIGRLLAQMEDAP  824 (1034)
T ss_pred             ceeeccCCceEEEEEeccccCccccceeeeEhhh-ccCcccceeeeeccceeeec---cCcceeecccccchhHhhhcCc
Confidence            3444445555555544321     1123344444 99999999999998888865   9999999987776665432   


Q ss_pred             --cccccEEEEEe-cCCEEEEe-ecCCeEEEEECcCCCcccee-----eecCCccEEEEEEccCCcEEEEEe-cCeEEEE
Q psy14511        282 --THMHQVIAMCW-NGNLLSCG-TIGGNILHYDVRTHSDYPTA-----ITREGDVVCGLKWSPNGRYLASGS-NNTVKIW  351 (488)
Q Consensus       282 --~~~~~v~~~~~-~~~~l~~~-~~dg~i~i~d~~~~~~~~~~-----~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iw  351 (488)
                        +..+.|.++.- +...+.+| +...+++++|.+..+ ....     ..+.+..+.+++..|.|+++|.+- .|.|.+.
T Consensus       825 k~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce-~~~E~kVcna~~Pna~~R~iaVa~~GN~lAa~LSnGci~~L  903 (1034)
T KOG4190|consen  825 KEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCE-WTCELKVCNAPGPNALTRAIAVADKGNKLAAALSNGCIAIL  903 (1034)
T ss_pred             ccCCCceeEecccCcchheeeeccchhhheeeeccccc-ceeeEEeccCCCCchheeEEEeccCcchhhHHhcCCcEEEE
Confidence              22234445444 44455444 778899999998754 2222     234556688999999999999887 5999999


Q ss_pred             ECCCCCCCcccceeee----eecCCCCEEEEEccCCCCeEEE-EeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCC
Q psy14511        352 DFRQLDAKRPLGLIVP----KLKREGRELVTSHGKQDCSLKM-WEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASAD  426 (488)
Q Consensus       352 d~~~~~~~~~~~~~~~----~~~~~~~~l~~~~g~~~~~i~i-~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~d  426 (488)
                      |.+++......+...+    .-.|..+.++.  ...|.++.+ |..-++....+.+....+..-+  -.-|..|+++...
T Consensus       904 DaR~G~vINswrpmecdllqlaapsdq~L~~--saldHslaVnWhaldgimh~q~kpppepahfl--qsvgpSLV~a~~G  979 (1034)
T KOG4190|consen  904 DARNGKVINSWRPMECDLLQLAAPSDQALAQ--SALDHSLAVNWHALDGIMHLQDKPPPEPAHFL--QSVGPSLVTAQNG  979 (1034)
T ss_pred             ecCCCceeccCCcccchhhhhcCchhHHHHh--hcccceeEeeehhcCCeeeeccCCCCcchhhh--hccCceeEEeccC
Confidence            9999976554444433    33455566665  456778887 8776665544444333222111  1236677777766


Q ss_pred             CcEEEEecCCC-------CccccccccCCcceEEeecCCCce
Q psy14511        427 ETISIWNCFPR-------DKKRKARQVGSGSSLEFAILKQPV  461 (488)
Q Consensus       427 g~v~iw~~~~~-------~~~~~~~~~~~v~~~~~s~~~~~~  461 (488)
                      ..+.+|.-...       ..++.....+..++++--|-.+.+
T Consensus       980 n~lgVYad~a~~ha~stitKiR~d~f~G~lTala~LPLN~af 1021 (1034)
T KOG4190|consen  980 NILGVYADSAELHAESTITKIRPDEFPGTLTALAPLPLNCAF 1021 (1034)
T ss_pred             cEEEEEecchhhhhhhhhccccccccCCccceeeeccccchh
Confidence            67777753211       122333445666777766654444

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=98.90  E-value=1.5e-06  Score=79.93  Aligned_cols=224  Identities=9%  Similarity=-0.040  Sum_probs=134.9

Q ss_pred             CCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEE-EEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecccccc
Q psy14511        208 YHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISC-VAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQ  286 (488)
Q Consensus       208 ~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~  286 (488)
                      ++.+++++.++.++-+|.++|+..-.....+    .+.+ ...  .+..++++ ..++.+..+|.++++.+.........
T Consensus       120 ~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~----~~~ssP~v--~~~~v~v~-~~~g~l~ald~~tG~~~W~~~~~~~~  192 (394)
T PRK11138        120 GGKVYIGSEKGQVYALNAEDGEVAWQTKVAG----EALSRPVV--SDGLVLVH-TSNGMLQALNESDGAVKWTVNLDVPS  192 (394)
T ss_pred             CCEEEEEcCCCEEEEEECCCCCCcccccCCC----ceecCCEE--ECCEEEEE-CCCCEEEEEEccCCCEeeeecCCCCc
Confidence            4678888899999999999998766655432    1211 112  13466667 78999999999999888776542111


Q ss_pred             E-----EEEEecCCEEEEeecCCeEEEEECcCCCccceeeecCC---c---cEEEEEEcc---CCcEEEEEecCeEEEEE
Q psy14511        287 V-----IAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREG---D---VVCGLKWSP---NGRYLASGSNNTVKIWD  352 (488)
Q Consensus       287 v-----~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~---~---~i~~~~~s~---~~~~l~~~~d~~i~iwd  352 (488)
                      .     .+....+..++.++.+|.+..+|..+++..-..-....   .   ....+.-+|   ++..++.+.++.+..+|
T Consensus       193 ~~~~~~~sP~v~~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald  272 (394)
T PRK11138        193 LTLRGESAPATAFGGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALD  272 (394)
T ss_pred             ccccCCCCCEEECCEEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEE
Confidence            1     11122345677788899999999887653222111000   0   001111122   44444444469999999


Q ss_pred             CCCCCCCcccceee-eeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccc-cEEEEEEcCCCCEEEEEeCCCcEE
Q psy14511        353 FRQLDAKRPLGLIV-PKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQE-RILSAVLSPDQTCVAAASADETIS  430 (488)
Q Consensus       353 ~~~~~~~~~~~~~~-~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~t~~~dg~v~  430 (488)
                      ..+++..-...... ......+..+++  +..++.+..+|..+++.+.....-.. ...+...  .+.+|+.++.||.|.
T Consensus       273 ~~tG~~~W~~~~~~~~~~~~~~~~vy~--~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v--~~g~l~v~~~~G~l~  348 (394)
T PRK11138        273 LRSGQIVWKREYGSVNDFAVDGGRIYL--VDQNDRVYALDTRGGVELWSQSDLLHRLLTAPVL--YNGYLVVGDSEGYLH  348 (394)
T ss_pred             CCCCCEEEeecCCCccCcEEECCEEEE--EcCCCeEEEEECCCCcEEEcccccCCCcccCCEE--ECCEEEEEeCCCEEE
Confidence            98875432111100 112234556666  46789999999999987654322111 1222222  356778899999999


Q ss_pred             EEecCCCCcccc
Q psy14511        431 IWNCFPRDKKRK  442 (488)
Q Consensus       431 iw~~~~~~~~~~  442 (488)
                      ..|..+++.+..
T Consensus       349 ~ld~~tG~~~~~  360 (394)
T PRK11138        349 WINREDGRFVAQ  360 (394)
T ss_pred             EEECCCCCEEEE
Confidence            999999987643

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=98.89  E-value=6.1e-06  Score=74.52  Aligned_cols=209  Identities=14%  Similarity=0.122  Sum_probs=108.3

Q ss_pred             EEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccc--cccEEEEEe--cCCEEEEeecCCeEEEEECcCCCcccee
Q psy14511        245 SCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTH--MHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTA  320 (488)
Q Consensus       245 ~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~--~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~  320 (488)
                      ..+.||||+++|+..--.+..|..+.+...     ...+  ...+..+.+  -|....    .-.+.++|+.+++.....
T Consensus       104 ~~~~WSpd~~~la~~~~d~~~v~~~~~~~~-----~~~~~~yp~~~~~~YPk~G~~np----~v~l~v~~~~~~~~~~~~  174 (353)
T PF00930_consen  104 SAVWWSPDSKYLAFLRFDEREVPEYPLPDY-----SPPDSQYPEVESIRYPKAGDPNP----RVSLFVVDLASGKTTELD  174 (353)
T ss_dssp             BSEEE-TTSSEEEEEEEE-TTS-EEEEEEE-----SSSTESS-EEEEEE--BTTS-------EEEEEEEESSSTCCCEE-
T ss_pred             cceEECCCCCEEEEEEECCcCCceEEeecc-----CCccccCCcccccccCCCCCcCC----ceEEEEEECCCCcEEEee
Confidence            468899999999988444555555443211     0000  012333333  111111    113667888776532111


Q ss_pred             e----ecCCccEEEEEEccCCc-EEEEEe--c---CeEEEEECCCCCCCccccee---------eeeec-CCCCEEEEEc
Q psy14511        321 I----TREGDVVCGLKWSPNGR-YLASGS--N---NTVKIWDFRQLDAKRPLGLI---------VPKLK-REGRELVTSH  380 (488)
Q Consensus       321 ~----~~~~~~i~~~~~s~~~~-~l~~~~--d---~~i~iwd~~~~~~~~~~~~~---------~~~~~-~~~~~l~~~~  380 (488)
                      .    ......+..+.|.++++ +++.-.  +   -.+.+.|..++.........         ...+. +++..++..+
T Consensus       175 ~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s  254 (353)
T PF00930_consen  175 PPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDVYDPPHFLGPDGNEFLWIS  254 (353)
T ss_dssp             --HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEE
T ss_pred             eccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCCcceeeecccccccCCCCEEEEEE
Confidence            1    23456688999999998 444333  2   34666677665433222221         11443 6666666553


Q ss_pred             cCCCCe--EEEEeCCCcceeEEEeeccccEEE-EEEcCCCCEEE-EEeCC----CcEEEEecC-CCCccccccccCCcce
Q psy14511        381 GKQDCS--LKMWEYPRLHLIEELKIHQERILS-AVLSPDQTCVA-AASAD----ETISIWNCF-PRDKKRKARQVGSGSS  451 (488)
Q Consensus       381 g~~~~~--i~i~d~~~~~~~~~~~~~~~~v~~-~~~s~~~~~l~-t~~~d----g~v~iw~~~-~~~~~~~~~~~~~v~~  451 (488)
                      - .+|-  |++++...+. ...+....-.|.. +.|+++++.|. ++..+    ..|+.-++. .++...+....+....
T Consensus       255 ~-~~G~~hly~~~~~~~~-~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~~~~LT~~~~~~~~  332 (353)
T PF00930_consen  255 E-RDGYRHLYLYDLDGGK-PRQLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSGGEPKCLTCEDGDHYS  332 (353)
T ss_dssp             E-TTSSEEEEEEETTSSE-EEESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTETTEEEESSTTSSTTEE
T ss_pred             E-cCCCcEEEEEcccccc-eeccccCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCCCCeEeccCCCCCceE
Confidence            3 5654  5555666554 3455545556754 77888877654 45543    356666666 4444444333333359


Q ss_pred             EEeecCCCceEEE
Q psy14511        452 LEFAILKQPVSLT  464 (488)
Q Consensus       452 ~~~s~~~~~~~~~  464 (488)
                      +.|||+++.+...
T Consensus       333 ~~~Spdg~y~v~~  345 (353)
T PF00930_consen  333 ASFSPDGKYYVDT  345 (353)
T ss_dssp             EEE-TTSSEEEEE
T ss_pred             EEECCCCCEEEEE
Confidence            9999999988553

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=98.89  E-value=1.1e-06  Score=79.28  Aligned_cols=105  Identities=19%  Similarity=0.289  Sum_probs=67.9

Q ss_pred             ccCCceEEEe---------ecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCC
Q psy14511          2 CWNGNLLSCG---------TIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRP   72 (488)
Q Consensus         2 ~~dg~~la~g---------~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~   72 (488)
                      |.||++++..         +..+.+.|||+++++..  .+......+....|||+|++||...++.|.+++..++...+ 
T Consensus         1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~--~l~~~~~~~~~~~~sP~g~~~~~v~~~nly~~~~~~~~~~~-   77 (353)
T PF00930_consen    1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEIT--PLTPPPPKLQDAKWSPDGKYIAFVRDNNLYLRDLATGQETQ-   77 (353)
T ss_dssp             -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEE--ESS-EETTBSEEEE-SSSTEEEEEETTEEEEESSTTSEEEE-
T ss_pred             CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceE--ECcCCccccccceeecCCCeeEEEecCceEEEECCCCCeEE-
Confidence            4578887763         24567999999997632  22222567888999999999999999999999987653222 


Q ss_pred             cccccc-------c---------ccceeEEEEecCCCeEEeeeCCcccceEEEEec
Q psy14511         73 QVNNQC-------H---------LSAVKAIAWCPWEPTLLATGGGICDQTVRLWNS  112 (488)
Q Consensus        73 ~~~~~~-------h---------~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~  112 (488)
                      +. ..+       -         -+.-..+-||||+++|+...-.  +..+..+.+
T Consensus        78 lT-~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d--~~~v~~~~~  130 (353)
T PF00930_consen   78 LT-TDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFD--EREVPEYPL  130 (353)
T ss_dssp             SE-S--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE---TTS-EEEE
T ss_pred             ec-cccceeEEcCccceeccccccccccceEECCCCCEEEEEEEC--CcCCceEEe
Confidence            11 111       0         1223578899999998887763  555655544

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=98.88  E-value=1.6e-06  Score=73.99  Aligned_cols=214  Identities=12%  Similarity=0.051  Sum_probs=134.1

Q ss_pred             CCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEecCCE
Q psy14511        217 DTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNL  296 (488)
Q Consensus       217 d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~  296 (488)
                      ++.|..||..+++..-...+.. ......+.. .+++..++++ +.++.+..||..+++.+...............++..
T Consensus         2 ~g~l~~~d~~tG~~~W~~~~~~-~~~~~~~~~-~~~~~~v~~~-~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~   78 (238)
T PF13360_consen    2 DGTLSALDPRTGKELWSYDLGP-GIGGPVATA-VPDGGRVYVA-SGDGNLYALDAKTGKVLWRFDLPGPISGAPVVDGGR   78 (238)
T ss_dssp             TSEEEEEETTTTEEEEEEECSS-SCSSEEETE-EEETTEEEEE-ETTSEEEEEETTTSEEEEEEECSSCGGSGEEEETTE
T ss_pred             CCEEEEEECCCCCEEEEEECCC-CCCCccceE-EEeCCEEEEE-cCCCEEEEEECCCCCEEEEeeccccccceeeecccc
Confidence            6889999999999887776532 122222222 2356678877 799999999999998887776422111113446777


Q ss_pred             EEEeecCCeEEEEECcCCCccceeeecC--C-ccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCccccee-------
Q psy14511        297 LSCGTIGGNILHYDVRTHSDYPTAITRE--G-DVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLI-------  365 (488)
Q Consensus       297 l~~~~~dg~i~i~d~~~~~~~~~~~~~~--~-~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~-------  365 (488)
                      ++.++.++.++.+|..+++.........  . ..........++..++.+. ++.+..+|+++++..-.....       
T Consensus        79 v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~  158 (238)
T PF13360_consen   79 VYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSSP  158 (238)
T ss_dssp             EEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS--
T ss_pred             cccccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCCcc
Confidence            7777788899999998876444322211  1 1112223333477777777 699999999988652221110       


Q ss_pred             --------eeeecCCCCEEEEEccCCCCe-EEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCC
Q psy14511        366 --------VPKLKREGRELVTSHGKQDCS-LKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFP  436 (488)
Q Consensus       366 --------~~~~~~~~~~l~~~~g~~~~~-i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~  436 (488)
                              ......++ .+++  ...++. +.+ |+++++.+....  ...+.. ...+++..|+.++.++.|..||+.+
T Consensus       159 ~~~~~~~~~~~~~~~~-~v~~--~~~~g~~~~~-d~~tg~~~w~~~--~~~~~~-~~~~~~~~l~~~~~~~~l~~~d~~t  231 (238)
T PF13360_consen  159 ISSFSDINGSPVISDG-RVYV--SSGDGRVVAV-DLATGEKLWSKP--ISGIYS-LPSVDGGTLYVTSSDGRLYALDLKT  231 (238)
T ss_dssp             EEEETTEEEEEECCTT-EEEE--ECCTSSEEEE-ETTTTEEEEEEC--SS-ECE-CEECCCTEEEEEETTTEEEEEETTT
T ss_pred             eeeecccccceEEECC-EEEE--EcCCCeEEEE-ECCCCCEEEEec--CCCccC-CceeeCCEEEEEeCCCEEEEEECCC
Confidence                    11222344 5555  344554 555 999998664333  222222 1456788888888999999999999


Q ss_pred             CCcc
Q psy14511        437 RDKK  440 (488)
Q Consensus       437 ~~~~  440 (488)
                      ++..
T Consensus       232 G~~~  235 (238)
T PF13360_consen  232 GKVV  235 (238)
T ss_dssp             TEEE
T ss_pred             CCEE
Confidence            9854

...

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=98.88  E-value=7.3e-06  Score=69.29  Aligned_cols=73  Identities=11%  Similarity=0.061  Sum_probs=43.7

Q ss_pred             EEEEEcc-CCcEEEEec--CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCC--cccceEEEEecC
Q psy14511         40 CGLKWSP-NGRYLASGS--NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGG--ICDQTVRLWNSM  113 (488)
Q Consensus        40 ~~l~~sp-~g~~las~~--d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~--~~d~~i~vwd~~  113 (488)
                      ..++.+| .+..++.+-  .....+||..+++....+....++- --=.-.|++||++|+++-.+  ...|.|-|||..
T Consensus         8 H~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRH-FyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~   85 (305)
T PF07433_consen    8 HGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRH-FYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAA   85 (305)
T ss_pred             cceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCE-EecCEEEcCCCCEEEEeccccCCCcEEEEEEECc
Confidence            4578888 455666665  5678899998876554333211100 01124699999988887541  014566666665

>KOG3914|consensus

Probab=98.86  E-value=7e-08  Score=81.94  Aligned_cols=154  Identities=12%  Similarity=0.141  Sum_probs=102.7

Q ss_pred             ceEEEEEcCCCCeEEEEeCCCCcEEEEECCccee----eeeeccccccEEEEEe--cCCEEEEeecC---CeEEEEECcC
Q psy14511        243 YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERL----IQKLRTHMHQVIAMCW--NGNLLSCGTIG---GNILHYDVRT  313 (488)
Q Consensus       243 ~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~----~~~~~~~~~~v~~~~~--~~~~l~~~~~d---g~i~i~d~~~  313 (488)
                      ....+..+|.+++++++ ..+....++++.....    .... .-...-.++.+  +...+..+..-   ..+.+|....
T Consensus        64 a~~~~~~s~~~~llAv~-~~~K~~~~f~~~~~~~~~kl~~~~-~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~  141 (390)
T KOG3914|consen   64 APALVLTSDSGRLVAVA-TSSKQRAVFDYRENPKGAKLLDVS-CVPKRPTAISFIREDTSVLVADKAGDVYSFDILSADS  141 (390)
T ss_pred             cccccccCCCceEEEEE-eCCCceEEEEEecCCCcceeeeEe-ecccCcceeeeeeccceEEEEeecCCceeeeeecccc
Confidence            34456678888888888 7777766666554322    1111 12223344444  33444444333   4455555443


Q ss_pred             CCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeC
Q psy14511        314 HSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEY  392 (488)
Q Consensus       314 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~  392 (488)
                        -....+.+|-+.+..++|+||+++++++. |..|++-.....                                    
T Consensus       142 --~~~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~------------------------------------  183 (390)
T KOG3914|consen  142 --GRCEPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPAT------------------------------------  183 (390)
T ss_pred             --cCcchhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcc------------------------------------
Confidence              34566788999999999999999999998 688887765532                                    


Q ss_pred             CCcceeE-EEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcc
Q psy14511        393 PRLHLIE-ELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKK  440 (488)
Q Consensus       393 ~~~~~~~-~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~  440 (488)
                         -.+. -.-||+.-|..++.-++ ..|+++|.|++|++||+.+++.+
T Consensus       184 ---f~IesfclGH~eFVS~isl~~~-~~LlS~sGD~tlr~Wd~~sgk~L  228 (390)
T KOG3914|consen  184 ---FVIESFCLGHKEFVSTISLTDN-YLLLSGSGDKTLRLWDITSGKLL  228 (390)
T ss_pred             ---cchhhhccccHhheeeeeeccC-ceeeecCCCCcEEEEecccCCcc
Confidence               1111 23469999999998654 56899999999999999999876

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=98.85  E-value=1.8e-05  Score=67.74  Aligned_cols=201  Identities=14%  Similarity=0.186  Sum_probs=127.8

Q ss_pred             CCcEEEEE-CCCeEEEEECCCCceEEEEecCCCCCCceEEEEEc-CCCCeEEEEeCCCCcEEEEECCcceeeeeecc---
Q psy14511        208 YHDTLAVA-LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWK-PRTTDLAVTNTCTEYIDLWHEQEERLIQKLRT---  282 (488)
Q Consensus       208 ~~~~~~~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~---  282 (488)
                      .+.++.+. ..+.|+.|+..+++... +..    .. ...+++. +++ .++++ .. +.+.++|..+++.......   
T Consensus        11 ~g~l~~~D~~~~~i~~~~~~~~~~~~-~~~----~~-~~G~~~~~~~g-~l~v~-~~-~~~~~~d~~~g~~~~~~~~~~~   81 (246)
T PF08450_consen   11 DGRLYWVDIPGGRIYRVDPDTGEVEV-IDL----PG-PNGMAFDRPDG-RLYVA-DS-GGIAVVDPDTGKVTVLADLPDG   81 (246)
T ss_dssp             TTEEEEEETTTTEEEEEETTTTEEEE-EES----SS-EEEEEEECTTS-EEEEE-ET-TCEEEEETTTTEEEEEEEEETT
T ss_pred             CCEEEEEEcCCCEEEEEECCCCeEEE-Eec----CC-CceEEEEccCC-EEEEE-Ec-CceEEEecCCCcEEEEeeccCC
Confidence            35666666 68899999998886543 332    12 6677777 665 55555 33 4556669888754433332   


Q ss_pred             --ccccEEEEEe--cCCEEEEeecC--------CeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-c-CeE
Q psy14511        283 --HMHQVIAMCW--NGNLLSCGTIG--------GNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-N-NTV  348 (488)
Q Consensus       283 --~~~~v~~~~~--~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d-~~i  348 (488)
                        .....+.+++  +|++.++....        |.++.++.. + .. ......-...+.++|+|+++.|+.+. . +.|
T Consensus        82 ~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~-~~-~~~~~~~~~pNGi~~s~dg~~lyv~ds~~~~i  158 (246)
T PF08450_consen   82 GVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-G-KV-TVVADGLGFPNGIAFSPDGKTLYVADSFNGRI  158 (246)
T ss_dssp             CSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-S-EE-EEEEEEESSEEEEEEETTSSEEEEEETTTTEE
T ss_pred             CcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-C-eE-EEEecCcccccceEECCcchheeeccccccee
Confidence              3456677777  57766665433        456777766 2 22 22223334478999999999887665 3 899


Q ss_pred             EEEECCCCCC-C---ccc---cee---e--eeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEc-C
Q psy14511        349 KIWDFRQLDA-K---RPL---GLI---V--PKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLS-P  415 (488)
Q Consensus       349 ~iwd~~~~~~-~---~~~---~~~---~--~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s-~  415 (488)
                      ..+++..... .   +.+   ...   .  .++..+|+..++  ....+.|.++|.. |+.+..+.-....+++++|. |
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va--~~~~~~I~~~~p~-G~~~~~i~~p~~~~t~~~fgg~  235 (246)
T PF08450_consen  159 WRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVA--DWGGGRIVVFDPD-GKLLREIELPVPRPTNCAFGGP  235 (246)
T ss_dssp             EEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEE--EETTTEEEEEETT-SCEEEEEE-SSSSEEEEEEEST
T ss_pred             EEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEE--EcCCCEEEEECCC-ccEEEEEcCCCCCEEEEEEECC
Confidence            9999864322 1   111   111   1  177888887776  4578899999977 88888887665689999994 6


Q ss_pred             CCCEEEEE
Q psy14511        416 DQTCVAAA  423 (488)
Q Consensus       416 ~~~~l~t~  423 (488)
                      +.+.|...
T Consensus       236 ~~~~L~vT  243 (246)
T PF08450_consen  236 DGKTLYVT  243 (246)
T ss_dssp             TSSEEEEE
T ss_pred             CCCEEEEE
Confidence            65655443

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=98.83  E-value=1.8e-05  Score=67.70  Aligned_cols=208  Identities=13%  Similarity=0.034  Sum_probs=129.3

Q ss_pred             EEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeec
Q psy14511        246 CVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITR  323 (488)
Q Consensus       246 ~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~  323 (488)
                      +++|.+....|+......+.|..|+..+++... +....  ...+.+  .+..++.+...+ +.++|..+++. ......
T Consensus         4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~-~~~~~--~~G~~~~~~~g~l~v~~~~~-~~~~d~~~g~~-~~~~~~   78 (246)
T PF08450_consen    4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEV-IDLPG--PNGMAFDRPDGRLYVADSGG-IAVVDPDTGKV-TVLADL   78 (246)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEETTTTEEEE-EESSS--EEEEEEECTTSEEEEEETTC-EEEEETTTTEE-EEEEEE
T ss_pred             ceEEECCCCEEEEEEcCCCEEEEEECCCCeEEE-EecCC--CceEEEEccCCEEEEEEcCc-eEEEecCCCcE-EEEeec
Confidence            578888445555553778999999998865533 22222  444444  355666666554 55558877532 222211


Q ss_pred             -----CCccEEEEEEccCCcEEEEEec---------CeEEEEECCCCCCCcccceee----eeecCCCCEEEEEccCCCC
Q psy14511        324 -----EGDVVCGLKWSPNGRYLASGSN---------NTVKIWDFRQLDAKRPLGLIV----PKLKREGRELVTSHGKQDC  385 (488)
Q Consensus       324 -----~~~~i~~~~~s~~~~~l~~~~d---------~~i~iwd~~~~~~~~~~~~~~----~~~~~~~~~l~~~~g~~~~  385 (488)
                           .....+.+++.|+|++.++...         +.+..++.. ++.......+.    .+|+|+++.|+++ .+..+
T Consensus        79 ~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~~~~~pNGi~~s~dg~~lyv~-ds~~~  156 (246)
T PF08450_consen   79 PDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVADGLGFPNGIAFSPDGKTLYVA-DSFNG  156 (246)
T ss_dssp             ETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEEEESSEEEEEEETTSSEEEEE-ETTTT
T ss_pred             cCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEecCcccccceEECCcchheeec-ccccc
Confidence                 3456889999999997777652         346666666 33222222221    1999999988765 57788


Q ss_pred             eEEEEeCCCc-c-e--eEEE---eeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccccccc-cCCcceEEee-c
Q psy14511        386 SLKMWEYPRL-H-L--IEEL---KIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKARQ-VGSGSSLEFA-I  456 (488)
Q Consensus       386 ~i~i~d~~~~-~-~--~~~~---~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~~~~-~~~v~~~~~s-~  456 (488)
                      .|..+++... . .  ...+   ....+..-.+++..+|++.++....+.|.+++.+ ++....... ...+++++|. +
T Consensus       157 ~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~~~~i~~p~~~~t~~~fgg~  235 (246)
T PF08450_consen  157 RIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-GKLLREIELPVPRPTNCAFGGP  235 (246)
T ss_dssp             EEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-SCEEEEEE-SSSSEEEEEEEST
T ss_pred             eeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-ccEEEEEcCCCCCEEEEEEECC
Confidence            8999998532 2 1  1222   2222347889999999998888889999999988 666543332 3578999994 5


Q ss_pred             CCCce
Q psy14511        457 LKQPV  461 (488)
Q Consensus       457 ~~~~~  461 (488)
                      +...+
T Consensus       236 ~~~~L  240 (246)
T PF08450_consen  236 DGKTL  240 (246)
T ss_dssp             TSSEE
T ss_pred             CCCEE
Confidence            54544

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>KOG4714|consensus

Probab=98.83  E-value=5.2e-08  Score=77.77  Aligned_cols=106  Identities=20%  Similarity=0.288  Sum_probs=69.3

Q ss_pred             CceEEEeecCCeEEEEEcccCcccceeec-ccCceEEEEEEccCCcEEEEec------CCeEEEEeccccCcCCCccccc
Q psy14511          5 GNLLSCGTIGGNILHYDVRTHSDYPTAIT-REGDVVCGLKWSPNGRYLASGS------NNTVKIWDFRQLDAKRPQVNNQ   77 (488)
Q Consensus         5 g~~la~g~~dg~i~iwd~~~~~~~~~~~~-~h~~~V~~l~~sp~g~~las~~------d~~i~vwd~~~~~~~~~~~~~~   77 (488)
                      ++-+++++.||.+.+++.+.-..+..... .|.+ -.+.+....+++|.++.      -+..+.|++...+...+   -.
T Consensus       101 ~t~V~~~~~dg~~~v~s~~~~~~~~~~i~~~~~~-~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~~~---~~  176 (319)
T KOG4714|consen  101 DNRVCIGYADGSLAVFSTDKDLALMSRIPSIHSG-SASRKICRHGNSILSGGCGNWNAQDNFYANTLDPIKTLIP---SK  176 (319)
T ss_pred             CCceEecCCCceEEEEechHHHhhhhhccccccc-ccccceeecccEEecCCcceEeeccceeeecccccccccc---cc
Confidence            57789999999999999876332222222 1222 23344455677777765      25667777653221111   11


Q ss_pred             ccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCe
Q psy14511         78 CHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGK  116 (488)
Q Consensus        78 ~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~  116 (488)
                      ..-..|.+++-+|.-+.++.+|.+  ||.+.+||.++..
T Consensus       177 ~~~~~v~~l~~hp~qq~~v~cgt~--dg~~~l~d~rn~~  213 (319)
T KOG4714|consen  177 KALDAVTALCSHPAQQHLVCCGTD--DGIVGLWDARNVA  213 (319)
T ss_pred             cccccchhhhCCcccccEEEEecC--CCeEEEEEccccc
Confidence            122349999999988899999986  9999999998764

>PRK02888 nitrous-oxide reductase; Validated

Probab=98.82  E-value=4.5e-06  Score=77.36  Aligned_cols=196  Identities=15%  Similarity=0.166  Sum_probs=114.4

Q ss_pred             CCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCC----CCcEEEEECCcceeeeeeccccccEEEEEe
Q psy14511        217 DTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTC----TEYIDLWHEQEERLIQKLRTHMHQVIAMCW  292 (488)
Q Consensus       217 d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~----~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~  292 (488)
                      .+.+.+.|.++.+....+...    .....++++|+|++++++ +.    ..++..-+......+..+.  ...+..+.-
T Consensus       214 ~~~vSvID~etmeV~~qV~Vd----gnpd~v~~spdGk~afvT-syNsE~G~tl~em~a~e~d~~vvfn--i~~iea~vk  286 (635)
T PRK02888        214 RSLFTAVDAETMEVAWQVMVD----GNLDNVDTDYDGKYAFST-CYNSEEGVTLAEMMAAERDWVVVFN--IARIEEAVK  286 (635)
T ss_pred             eEEEEEEECccceEEEEEEeC----CCcccceECCCCCEEEEe-ccCcccCcceeeeccccCceEEEEc--hHHHHHhhh
Confidence            455666777776665555543    245678899999999988 42    1223222222211111111  000111112


Q ss_pred             cCCEEEEeecCCeEEEEECcC----CCccceeeecCCccEEEEEEccCCcEEEEEe--cCeEEEEECCCCCCC-------
Q psy14511        293 NGNLLSCGTIGGNILHYDVRT----HSDYPTAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAK-------  359 (488)
Q Consensus       293 ~~~~l~~~~~dg~i~i~d~~~----~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--d~~i~iwd~~~~~~~-------  359 (488)
                      +|++...  .++.|.+.|.++    +......+.- ......+.++|||+++++++  +.++.|+|+.+.+..       
T Consensus       287 dGK~~~V--~gn~V~VID~~t~~~~~~~v~~yIPV-GKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~  363 (635)
T PRK02888        287 AGKFKTI--GGSKVPVVDGRKAANAGSALTRYVPV-PKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKP  363 (635)
T ss_pred             CCCEEEE--CCCEEEEEECCccccCCcceEEEEEC-CCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCc
Confidence            5666555  367899999987    3333343433 33467899999999999988  499999999875420       


Q ss_pred             -----c----ccceeeeeecCCCCEEEEEccCCCCeEEEEeCCC----------cceeEEEeeccccEE-----EEEEcC
Q psy14511        360 -----R----PLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPR----------LHLIEELKIHQERIL-----SAVLSP  415 (488)
Q Consensus       360 -----~----~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~----------~~~~~~~~~~~~~v~-----~~~~s~  415 (488)
                           .    -+.....+|.++|....+  -.-|.+|..||+.+          ...+..+.-|-.+-.     .=.-.|
T Consensus       364 ~~~vvaevevGlGPLHTaFDg~G~ayts--lf~dsqv~kwn~~~a~~~~~g~~~~~v~~k~dV~y~pgh~~~~~g~t~~~  441 (635)
T PRK02888        364 RDAVVAEPELGLGPLHTAFDGRGNAYTT--LFLDSQIVKWNIEAAIRAYKGEKVDPIVQKLDVHYQPGHNHASMGETKEA  441 (635)
T ss_pred             cceEEEeeccCCCcceEEECCCCCEEEe--EeecceeEEEehHHHHHHhccccCCcceecccCCCccceeeecCCCcCCC
Confidence                 0    011113389999875544  46799999999876          234444443322211     112356


Q ss_pred             CCCEEEEEe
Q psy14511        416 DQTCVAAAS  424 (488)
Q Consensus       416 ~~~~l~t~~  424 (488)
                      ||++|++..
T Consensus       442 dgk~l~~~n  450 (635)
T PRK02888        442 DGKWLVSLN  450 (635)
T ss_pred             CCCEEEEcc
Confidence            777777653

>KOG4532|consensus

Probab=98.81  E-value=1.7e-06  Score=69.66  Aligned_cols=226  Identities=12%  Similarity=0.041  Sum_probs=140.9

Q ss_pred             CcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEc-CCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccE
Q psy14511        209 HDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWK-PRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQV  287 (488)
Q Consensus       209 ~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v  287 (488)
                      ..+++++..|...+|...+.+.....--.  +...|+-+.=. ...-.+..+ +.|.++++.++..+..-.......-.+
T Consensus        85 ~~la~gG~~g~fd~~~~~tn~~h~~~cd~--snn~v~~~~r~cd~~~~~~i~-sndht~k~~~~~~~s~~~~~h~~~~~~  161 (344)
T KOG4532|consen   85 VTLADGGASGQFDLFACNTNDGHLYQCDV--SNNDVTLVKRYCDLKFPLNIA-SNDHTGKTMVVSGDSNKFAVHNQNLTQ  161 (344)
T ss_pred             cEEEeccccceeeeecccCcccceeeecc--cccchhhhhhhcccccceeec-cCCcceeEEEEecCcccceeeccccce
Confidence            45666679999999999876532222111  33322222111 112234455 789999998876643322221111225


Q ss_pred             EEEEe--cCCEEEEeecCCeEEEEECcCCCcccee--eecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCccc
Q psy14511        288 IAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTA--ITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPL  362 (488)
Q Consensus       288 ~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~--~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~  362 (488)
                      .++++  +++++++.+....|..|.+.........  .....+.-.+..|+.....+|++. ||.+.|||++....+...
T Consensus       162 ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~  241 (344)
T KOG4532|consen  162 NSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAE  241 (344)
T ss_pred             eeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEecccccchhh
Confidence            55555  7899999999999999999876543332  233334456788999999999999 799999999876433221


Q ss_pred             cee----------eeeecCCCC--EEEEEccCCCCeEEEEeCCCcceeEEEee-------cc-ccEEEEEEcCCCCEEEE
Q psy14511        363 GLI----------VPKLKREGR--ELVTSHGKQDCSLKMWEYPRLHLIEELKI-------HQ-ERILSAVLSPDQTCVAA  422 (488)
Q Consensus       363 ~~~----------~~~~~~~~~--~l~~~~g~~~~~i~i~d~~~~~~~~~~~~-------~~-~~v~~~~~s~~~~~l~t  422 (488)
                      ...          .+.|++.|.  +|+.  ...-+.+++.|+++++..+.+.-       |. ..|..-.|+.++..+.+
T Consensus       242 ~sstrp~hnGa~R~c~Fsl~g~lDLLf~--sEhfs~~hv~D~R~~~~~q~I~i~~d~~~~~~tq~ifgt~f~~~n~s~~v  319 (344)
T KOG4532|consen  242 ISSTRPHHNGAFRVCRFSLYGLLDLLFI--SEHFSRVHVVDTRNYVNHQVIVIPDDVERKHNTQHIFGTNFNNENESNDV  319 (344)
T ss_pred             hcccCCCCCCceEEEEecCCCcceEEEE--ecCcceEEEEEcccCceeeEEecCccccccccccccccccccCCCccccc
Confidence            111          337887653  3344  35567899999999876554432       32 33778888888777776


Q ss_pred             EeCCCcEEEEecCCCCcc
Q psy14511        423 ASADETISIWNCFPRDKK  440 (488)
Q Consensus       423 ~~~dg~v~iw~~~~~~~~  440 (488)
                      .+++ .+.=|++..+.+.
T Consensus       320 ~~e~-~~ae~ni~srsR~  336 (344)
T KOG4532|consen  320 KNEL-QGAEYNILSRSRF  336 (344)
T ss_pred             ccch-hhheeecccccee
Confidence            6655 3566777665544

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=98.80  E-value=5.8e-06  Score=69.88  Aligned_cols=233  Identities=17%  Similarity=0.190  Sum_probs=129.3

Q ss_pred             CCceEEEeecCC-eEEEEEcccCcccceeecccCce--EEEEEEccCCcEEEEec------CCeEEEEeccccCcCCCcc
Q psy14511          4 NGNLLSCGTIGG-NILHYDVRTHSDYPTAITREGDV--VCGLKWSPNGRYLASGS------NNTVKIWDFRQLDAKRPQV   74 (488)
Q Consensus         4 dg~~la~g~~dg-~i~iwd~~~~~~~~~~~~~h~~~--V~~l~~sp~g~~las~~------d~~i~vwd~~~~~~~~~~~   74 (488)
                      ++..+|.+-.-| ...+||..+++.+.. +....+.  -=.-.|||||++|.+..      .|.|-|||...  ..+.+.
T Consensus        16 ~~~avafaRRPG~~~~v~D~~~g~~~~~-~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~--~~~ri~   92 (305)
T PF07433_consen   16 RPEAVAFARRPGTFALVFDCRTGQLLQR-LWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAAR--GYRRIG   92 (305)
T ss_pred             CCeEEEEEeCCCcEEEEEEcCCCceeeE-EcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcC--CcEEEe
Confidence            456677776655 577899998875432 2211111  11247999999999874      48999999982  245556


Q ss_pred             cccccccceeEEEEecCCCeEEeeeCC---------------cccceEEEEecCCCeeeeeeecCCCccccccccccccc
Q psy14511         75 NNQCHLSAVKAIAWCPWEPTLLATGGG---------------ICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQK  139 (488)
Q Consensus        75 ~~~~h~~~v~~l~~~~~~~~l~~~~~~---------------~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (488)
                      ++..|--....+.+.|||+.|++.-++               ..+..+.+.|..+|+.+.+......         ....
T Consensus        93 E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~---------~~~l  163 (305)
T PF07433_consen   93 EFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPD---------LHQL  163 (305)
T ss_pred             EecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCcc---------cccc
Confidence            666666667788999999887776432               1122344445555554444322100         0001


Q ss_pred             cceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCC-----CcEEEE
Q psy14511        140 KRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGY-----HDTLAV  214 (488)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~  214 (488)
                      ..+.++....|      .+                                          .....|..     .-+++.
T Consensus       164 SiRHLa~~~~G------~V------------------------------------------~~a~Q~qg~~~~~~PLva~  195 (305)
T PF07433_consen  164 SIRHLAVDGDG------TV------------------------------------------AFAMQYQGDPGDAPPLVAL  195 (305)
T ss_pred             ceeeEEecCCC------cE------------------------------------------EEEEecCCCCCccCCeEEE
Confidence            11111111100      00                                          00000000     011211


Q ss_pred             E-CCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe-
Q psy14511        215 A-LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW-  292 (488)
Q Consensus       215 ~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~-  292 (488)
                      - .++.+...........      . ....+-+|++++++..+++++-..+.+.+||..+++.+....-  ..+..++. 
T Consensus       196 ~~~g~~~~~~~~p~~~~~------~-l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~~~~~~l--~D~cGva~~  266 (305)
T PF07433_consen  196 HRRGGALRLLPAPEEQWR------R-LNGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRLLGSVPL--PDACGVAPT  266 (305)
T ss_pred             EcCCCcceeccCChHHHH------h-hCCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCEeecccc--Cceeeeeec
Confidence            1 2222333333222211      1 4578999999999999988867889999999999988776643  34566666 


Q ss_pred             cCCEEEEeecCCeE
Q psy14511        293 NGNLLSCGTIGGNI  306 (488)
Q Consensus       293 ~~~~l~~~~~dg~i  306 (488)
                      .+.++++.+ .|.+
T Consensus       267 ~~~f~~ssG-~G~~  279 (305)
T PF07433_consen  267 DDGFLVSSG-QGQL  279 (305)
T ss_pred             CCceEEeCC-CccE
Confidence            334454444 4443

>KOG1275|consensus

Probab=98.77  E-value=4.1e-07  Score=85.53  Aligned_cols=176  Identities=15%  Similarity=0.220  Sum_probs=133.6

Q ss_pred             CCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEE
Q psy14511        252 RTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGL  331 (488)
Q Consensus       252 ~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~  331 (488)
                      ++..++.| +....+..+|+++.+..+...-....+.-+..+++.+.+|...|+|.+-|.++. +....+..|.+.|..+
T Consensus       146 ~~~~~i~G-g~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR~Nnr~lf~G~t~G~V~LrD~~s~-~~iht~~aHs~siSDf  223 (1118)
T KOG1275|consen  146 GPSTLIMG-GLQEKLIHIDLNTEKETRTTNVSASGVTIMRYNNRNLFCGDTRGTVFLRDPNSF-ETIHTFDAHSGSISDF  223 (1118)
T ss_pred             CCcceeec-chhhheeeeecccceeeeeeeccCCceEEEEecCcEEEeecccceEEeecCCcC-ceeeeeeccccceeee
Confidence            34466667 677778889999988777776666668888889999999999999999999986 5788999999988765


Q ss_pred             EEccCCcEEEEEe-c---------CeEEEEECCCCCCCcccceeee----eecCCCC-EEEEEccCCCCeEEEEeCCCc-
Q psy14511        332 KWSPNGRYLASGS-N---------NTVKIWDFRQLDAKRPLGLIVP----KLKREGR-ELVTSHGKQDCSLKMWEYPRL-  395 (488)
Q Consensus       332 ~~s~~~~~l~~~~-d---------~~i~iwd~~~~~~~~~~~~~~~----~~~~~~~-~l~~~~g~~~~~i~i~d~~~~-  395 (488)
                      .  -.|+.|++|+ .         .-|+|||++......++.....    .|.|.-. .+++  .+..|+..+-|..+. 
T Consensus       224 D--v~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P~flrf~Psl~t~~~V--~S~sGq~q~vd~~~ls  299 (1118)
T KOG1275|consen  224 D--VQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGPQFLRFHPSLTTRLAV--TSQSGQFQFVDTATLS  299 (1118)
T ss_pred             e--ccCCeEEEeecccccccccccchhhhhhhhhhhccCCcccccCchhhhhcccccceEEE--EecccceeeccccccC
Confidence            4  4688898886 2         2379999999877666655533    6777543 4444  467888999884332 


Q ss_pred             ce-eEEE--eeccccEEEEEEcCCCCEEEEEeCCCcEEEEe
Q psy14511        396 HL-IEEL--KIHQERILSAVLSPDQTCVAAASADETISIWN  433 (488)
Q Consensus       396 ~~-~~~~--~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~  433 (488)
                      .+ ....  ..-...+..+++|++++.||.+..+|.|.+|.
T Consensus       300 NP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa  340 (1118)
T KOG1275|consen  300 NPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWA  340 (1118)
T ss_pred             CCccceeEEccCCCcceeEEecCCCceEEEecccCcEeeec
Confidence            12 2222  22234599999999999999999999999998

>KOG4714|consensus

Probab=98.77  E-value=1e-07  Score=76.14  Aligned_cols=148  Identities=16%  Similarity=0.229  Sum_probs=97.5

Q ss_pred             EEEEecCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe------cCeEEEEECCCCCCCcc
Q psy14511        288 IAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS------NNTVKIWDFRQLDAKRP  361 (488)
Q Consensus       288 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~------d~~i~iwd~~~~~~~~~  361 (488)
                      .....-++.++++..||.+.+.+.+........+......-.+.+....++.+.++.      -+..+.|+++.......
T Consensus        95 ~~~s~~~t~V~~~~~dg~~~v~s~~~~~~~~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~~~  174 (319)
T KOG4714|consen   95 DACTMTDNRVCIGYADGSLAVFSTDKDLALMSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQDNFYANTLDPIKTLIP  174 (319)
T ss_pred             ccccccCCceEecCCCceEEEEechHHHhhhhhcccccccccccceeecccEEecCCcceEeeccceeeecccccccccc
Confidence            344445788999999999999998763322222222111122233334455555443      25667777764432211


Q ss_pred             ccee---ee--eecCCCCEEEEEccCCCCeEEEEeCCCcc-eeEEEeeccccEEEEEEcC-CCCEEEEEeCCCcEEEEec
Q psy14511        362 LGLI---VP--KLKREGRELVTSHGKQDCSLKMWEYPRLH-LIEELKIHQERILSAVLSP-DQTCVAAASADETISIWNC  434 (488)
Q Consensus       362 ~~~~---~~--~~~~~~~~l~~~~g~~~~~i~i~d~~~~~-~~~~~~~~~~~v~~~~~s~-~~~~l~t~~~dg~v~iw~~  434 (488)
                      -...   +.  +-+|..+.++.+ |+.||.+-+||.++.. +...+..|+.+|+.+-|+| ++..|+++++||.+..||-
T Consensus       175 ~~~~~~~v~~l~~hp~qq~~v~c-gt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wda  253 (319)
T KOG4714|consen  175 SKKALDAVTALCSHPAQQHLVCC-GTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDA  253 (319)
T ss_pred             cccccccchhhhCCcccccEEEE-ecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcC
Confidence            1111   12  556666666665 8999999999998864 3446788999999999999 5779999999999999998


Q ss_pred             CC
Q psy14511        435 FP  436 (488)
Q Consensus       435 ~~  436 (488)
                      .+
T Consensus       254 s~  255 (319)
T KOG4714|consen  254 ST  255 (319)
T ss_pred             CC
Confidence            75

>KOG1645|consensus

Probab=98.77  E-value=8.8e-07  Score=75.45  Aligned_cols=93  Identities=16%  Similarity=0.223  Sum_probs=73.2

Q ss_pred             EEEEEcccCcccceeecccCceEEEEEEccCCc-EEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCe
Q psy14511         17 ILHYDVRTHSDYPTAITREGDVVCGLKWSPNGR-YLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPT   94 (488)
Q Consensus        17 i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~-~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~   94 (488)
                      ++..+..+.+.. +.+.+|...|..++|||..+ +|..++ +..|+|.|+++.   ........| ..+++++|.-|...
T Consensus       175 v~~l~~~~fkss-q~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~---~~vssy~a~-~~~wSC~wDlde~h  249 (463)
T KOG1645|consen  175 VQKLESHDFKSS-QILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETS---CVVSSYIAY-NQIWSCCWDLDERH  249 (463)
T ss_pred             eEEeccCCcchh-hcccccchhhhhhccCccccceeeeeccCceEEEEecccc---eeeeheecc-CCceeeeeccCCcc
Confidence            555555555543 36778899999999999887 777788 999999999973   333344445 78999999999988


Q ss_pred             EEeeeCCcccceEEEEecCCCe
Q psy14511         95 LLATGGGICDQTVRLWNSMNGK  116 (488)
Q Consensus        95 l~~~~~~~~d~~i~vwd~~~~~  116 (488)
                      .+.+|..  .|.|.+||++..+
T Consensus       250 ~IYaGl~--nG~VlvyD~R~~~  269 (463)
T KOG1645|consen  250 VIYAGLQ--NGMVLVYDMRQPE  269 (463)
T ss_pred             eeEEecc--CceEEEEEccCCC
Confidence            8998885  9999999997643

>KOG0309|consensus

Probab=98.75  E-value=9.9e-08  Score=87.40  Aligned_cols=227  Identities=15%  Similarity=0.293  Sum_probs=147.0

Q ss_pred             EeecCCeEEEEEccc--CcccceeecccCceEEEEEEccCCc-EEEEec-CCeEEEEeccccCcCCCcccccccccceeE
Q psy14511         10 CGTIGGNILHYDVRT--HSDYPTAITREGDVVCGLKWSPNGR-YLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKA   85 (488)
Q Consensus        10 ~g~~dg~i~iwd~~~--~~~~~~~~~~h~~~V~~l~~sp~g~-~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~   85 (488)
                      +......-.+|++..  .+.+.-.+.+|+.+|+.+-|.|... .||+++ |..+..||+.+..  +++.....-...-..
T Consensus        86 Vsts~qkaiiwnlA~ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~--~p~ys~~~w~s~asq  163 (1081)
T KOG0309|consen   86 VSTSNQKAIIWNLAKSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPH--RPFYSTSSWRSAASQ  163 (1081)
T ss_pred             EecCcchhhhhhhhcCCccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCC--cceeeeecccccCce
Confidence            334455566898764  3334456789999999999999654 788888 9999999998743  333333333355678


Q ss_pred             EEEecCCCeEEeeeCCcccceEEEEecCCCe-eeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccc
Q psy14511         86 IAWCPWEPTLLATGGGICDQTVRLWNSMNGK-EKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKR  164 (488)
Q Consensus        86 l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (488)
                      ++|+-....++++..   .+.|.+||++.|. .+..++++...+....+..                             
T Consensus       164 Vkwnyk~p~vlassh---g~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr-----------------------------  211 (1081)
T KOG0309|consen  164 VKWNYKDPNVLASSH---GNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNR-----------------------------  211 (1081)
T ss_pred             eeecccCcchhhhcc---CCceEEEeccCCCcceEEecccceeeehHHHhh-----------------------------
Confidence            999887777888776   7889999998765 3444444322221111110                             


Q ss_pred             cccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCce
Q psy14511        165 TVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYI  244 (488)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i  244 (488)
                                                               +-...++..+.|++|+.||.............  ...+|
T Consensus       212 -----------------------------------------~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~vt--t~~pi  248 (1081)
T KOG0309|consen  212 -----------------------------------------FKYSEIMSSSNDGTVKFWDYSKSTTESKRTVT--TNFPI  248 (1081)
T ss_pred             -----------------------------------------hhhhhhcccCCCCceeeecccccccccceecc--ccCcc
Confidence                                                     01256788889999999998765433222222  45566


Q ss_pred             EEEEEcCCCCeEEEEe-CCCCcEEE---------EECC-cceeeeeeccccccEEEEEe------c------CCEEEEee
Q psy14511        245 SCVAWKPRTTDLAVTN-TCTEYIDL---------WHEQ-EERLIQKLRTHMHQVIAMCW------N------GNLLSCGT  301 (488)
Q Consensus       245 ~~~~~~~~~~~l~~~~-~~~~~i~i---------~d~~-~~~~~~~~~~~~~~v~~~~~------~------~~~l~~~~  301 (488)
                      .--.+.|-|.-.++-- -.+..+.+         |+.. ..+++..+.+|...|..+.|      +      .-.|++-+
T Consensus       249 w~~r~~Pfg~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQLVTWS  328 (1081)
T KOG0309|consen  249 WRGRYLPFGEGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSRDFQLVTWS  328 (1081)
T ss_pred             eeccccccCceeEeccccCCeeeeeccccchhhhhccccCCcceeeecCcchHHHHHhhhhcccccCCCCccceeEEEee
Confidence            6667777554333220 11112222         3322 24678899999999988777      1      23789999


Q ss_pred             cCCeEEEEECcC
Q psy14511        302 IGGNILHYDVRT  313 (488)
Q Consensus       302 ~dg~i~i~d~~~  313 (488)
                      .|..+++|-+.+
T Consensus       329 kD~~lrlWpI~~  340 (1081)
T KOG0309|consen  329 KDQTLRLWPIDS  340 (1081)
T ss_pred             cCCceEeeeccH
Confidence            999999998754

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=98.72  E-value=3.4e-08  Score=56.61  Aligned_cols=35  Identities=34%  Similarity=0.869  Sum_probs=32.8

Q ss_pred             ceeecccCceEEEEEEccCCcEEEEec-CCeEEEEe
Q psy14511         29 PTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWD   63 (488)
Q Consensus        29 ~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd   63 (488)
                      ...+.+|.+.|++|+|+|++++|++++ |+.|++||
T Consensus         4 ~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    4 VRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             EEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            466899999999999999999999999 99999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>KOG1645|consensus

Probab=98.72  E-value=1.5e-06  Score=74.09  Aligned_cols=210  Identities=14%  Similarity=0.261  Sum_probs=128.2

Q ss_pred             EEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe---cCCE
Q psy14511        220 VYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW---NGNL  296 (488)
Q Consensus       220 v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~---~~~~  296 (488)
                      +++.+..+-+....  +++ +...|..++|+|..+-|+..++.+..|+|.|+++...+..+..+ ..+.+++|   +.++
T Consensus       175 v~~l~~~~fkssq~--lp~-~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~  250 (463)
T KOG1645|consen  175 VQKLESHDFKSSQI--LPG-EGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHV  250 (463)
T ss_pred             eEEeccCCcchhhc--ccc-cchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcce
Confidence            55555554444332  233 77889999999998744444389999999999998888888877 88999999   3688


Q ss_pred             EEEeecCCeEEEEECcCCCccceeeec--C-------------------------------------------------C
Q psy14511        297 LSCGTIGGNILHYDVRTHSDYPTAITR--E-------------------------------------------------G  325 (488)
Q Consensus       297 l~~~~~dg~i~i~d~~~~~~~~~~~~~--~-------------------------------------------------~  325 (488)
                      +++|..+|.|++||++....+...+.+  .                                                 .
T Consensus       251 IYaGl~nG~VlvyD~R~~~~~~~e~~a~~t~~pv~~i~~~~~n~~f~~gglLv~~lt~l~f~ei~~s~~~~p~vlele~p  330 (463)
T KOG1645|consen  251 IYAGLQNGMVLVYDMRQPEGPLMELVANVTINPVHKIAPVQPNKIFTSGGLLVFALTVLQFYEIVFSAECLPCVLELEPP  330 (463)
T ss_pred             eEEeccCceEEEEEccCCCchHhhhhhhhccCcceeecccCccccccccceEEeeehhhhhhhhhccccCCCcccccCCC
Confidence            999999999999999876543322221  0                                                 1


Q ss_pred             ccEEEEEEccCCcEEEEEe--c----------------CeEEEEECCCCC---CCcccceeee-eecCCCCEEEEEccCC
Q psy14511        326 DVVCGLKWSPNGRYLASGS--N----------------NTVKIWDFRQLD---AKRPLGLIVP-KLKREGRELVTSHGKQ  383 (488)
Q Consensus       326 ~~i~~~~~s~~~~~l~~~~--d----------------~~i~iwd~~~~~---~~~~~~~~~~-~~~~~~~~l~~~~g~~  383 (488)
                      +...+++.++..+.++..-  +                ..-.||..+...   ...++..-.. .-.++.++++.. |..
T Consensus       331 G~cismqy~~~snh~l~tyRs~pn~p~~r~il~~~d~~dG~pVc~~r~~~~Gs~~~kl~t~~ai~~~~~nn~iv~~-gd~  409 (463)
T KOG1645|consen  331 GICISMQYHGVSNHLLLTYRSNPNFPQSRFILGRIDFRDGFPVCGKRRTYFGSKQTKLSTTQAIRAVEDNNYIVVV-GDS  409 (463)
T ss_pred             cceeeeeecCccceEEEEecCCCCCccceeeeeeeccccCceeeeecccccCCcccccccccceeccccccEEEEe-cCC
Confidence            1122222222222222111  0                011112111110   0000000011 223455555544 778


Q ss_pred             CCeEEEEeCCCcceeEEEeeccccEEEEEEcC-C-CCEEEEEeCCCcEEEEecCC
Q psy14511        384 DCSLKMWEYPRLHLIEELKIHQERILSAVLSP-D-QTCVAAASADETISIWNCFP  436 (488)
Q Consensus       384 ~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~-~-~~~l~t~~~dg~v~iw~~~~  436 (488)
                      .+++.+||..+++.++++.- +.+|.+++... + +.+|++-. |..++|+..+.
T Consensus       410 tn~lil~D~~s~evvQ~l~~-~epv~Dicp~~~n~~syLa~LT-d~~v~Iyk~es  462 (463)
T KOG1645|consen  410 TNELILQDPHSFEVVQTLAL-SEPVLDICPNDTNGSSYLALLT-DDRVHIYKNES  462 (463)
T ss_pred             cceeEEeccchhheeeeccc-CcceeecceeecCCcchhhhee-cceEEEEecCC
Confidence            89999999999999998874 47888887655 2 34666665 55788887653

>KOG2114|consensus

Probab=98.68  E-value=9.9e-06  Score=76.18  Aligned_cols=116  Identities=6%  Similarity=0.052  Sum_probs=85.6

Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECC--c--ceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcC
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQ--E--ERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRT  313 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~--~--~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~  313 (488)
                      ...++.+++.+.+-+.+++| -.+|.|..+.-+  .  +...........+|+.+.+  ++..++....-..|.+|.+..
T Consensus       124 ~~~p~s~l~Vs~~l~~Iv~G-f~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~g  202 (933)
T KOG2114|consen  124 NPSPASSLAVSEDLKTIVCG-FTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKSVLFVATTEQVMLYSLSG  202 (933)
T ss_pred             CCCcceEEEEEccccEEEEE-ecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCceeEEEEecceeEEEEecC
Confidence            46788999999998888888 999999988432  1  2222223335678999999  566645555566799999985


Q ss_pred             CCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCC
Q psy14511        314 HSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQL  356 (488)
Q Consensus       314 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~  356 (488)
                      .......+..|..++.|.++++....++++++..+.+|+....
T Consensus       203 r~p~~~~ld~~G~~lnCss~~~~t~qfIca~~e~l~fY~sd~~  245 (933)
T KOG2114|consen  203 RTPSLKVLDNNGISLNCSSFSDGTYQFICAGSEFLYFYDSDGR  245 (933)
T ss_pred             CCcceeeeccCCccceeeecCCCCccEEEecCceEEEEcCCCc
Confidence            4434555788888899999998777688888889999998744

>KOG0882|consensus

Probab=98.67  E-value=6e-07  Score=77.58  Aligned_cols=234  Identities=13%  Similarity=0.062  Sum_probs=158.3

Q ss_pred             CCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecc--ccc
Q psy14511        208 YHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRT--HMH  285 (488)
Q Consensus       208 ~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~--~~~  285 (488)
                      .+-++.++.||.++.|.-..-........-..|...|.+++.+-++..+.+.+..|..++++|+..-..+..++.  -.+
T Consensus        20 a~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~DminmiKL~~lPg   99 (558)
T KOG0882|consen   20 AKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENFDMINMIKLVDLPG   99 (558)
T ss_pred             hheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeeccchhhhcccccCCC
Confidence            356788999999999986652323322221127788899999999988888634499999999887554433322  122


Q ss_pred             cEEEEEecC---CEE-EEeecCCeEEEEECcCCC-ccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCC-CCC
Q psy14511        286 QVIAMCWNG---NLL-SCGTIGGNILHYDVRTHS-DYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQ-LDA  358 (488)
Q Consensus       286 ~v~~~~~~~---~~l-~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~-~~~  358 (488)
                      .+..+.-.|   ..+ ++.-.++.+.++|-.... +......-|..+|..+.+.|.+..+.+.. .|.|.-|.... .+.
T Consensus       100 ~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qf  179 (558)
T KOG0882|consen  100 FAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQF  179 (558)
T ss_pred             ceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceeeccccceeEeecCCCcccC
Confidence            222221123   133 334467899999987655 34445566899999999999999888887 49999999873 111


Q ss_pred             Ccc-----ccee--------------eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEee----------------
Q psy14511        359 KRP-----LGLI--------------VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKI----------------  403 (488)
Q Consensus       359 ~~~-----~~~~--------------~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~----------------  403 (488)
                      ++.     +...              ...|+|++..+.+.  ..|..|+++++++++.++.+..                
T Consensus       180 Pr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl--~~DrkVR~F~~KtGklvqeiDE~~t~~~~q~ks~y~l~  257 (558)
T KOG0882|consen  180 PRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTL--NPDRKVRGFVFKTGKLVQEIDEVLTDAQYQPKSPYGLM  257 (558)
T ss_pred             ccccccccccccchhhcccccccCccceEEccccCccccc--CcccEEEEEEeccchhhhhhhccchhhhhccccccccc
Confidence            110     1000              11899999999995  5899999999999877665431                


Q ss_pred             ----------------cc-ccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcccccc
Q psy14511        404 ----------------HQ-ERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKAR  444 (488)
Q Consensus       404 ----------------~~-~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~~~  444 (488)
                                      |. ..-+.+.|...+++|+.++-=| |++.++.+++..+..+
T Consensus       258 ~VelgRRmaverelek~~~~~~~~~~fdes~~flly~t~~g-ikvin~~tn~v~ri~g  314 (558)
T KOG0882|consen  258 HVELGRRMAVERELEKHGSTVGTNAVFDESGNFLLYGTILG-IKVINLDTNTVVRILG  314 (558)
T ss_pred             eeehhhhhhHHhhHhhhcCcccceeEEcCCCCEEEeeccee-EEEEEeecCeEEEEec
Confidence                            11 1234577888899999888766 8888888877654433

>KOG2695|consensus

Probab=98.66  E-value=1.6e-07  Score=78.20  Aligned_cols=167  Identities=15%  Similarity=0.188  Sum_probs=114.6

Q ss_pred             eEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCc--CCCcccccccccce
Q psy14511          7 LLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDA--KRPQVNNQCHLSAV   83 (488)
Q Consensus         7 ~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~--~~~~~~~~~h~~~v   83 (488)
                      .+++| -+-.|.+-|++++.+  +.+. ..+.|.++.|...++++..|. +|.|.+.|++....  ..+.. ..-|.+.|
T Consensus       227 hfs~G-~sqqv~L~nvetg~~--qsf~-sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~-rlyh~Ssv  301 (425)
T KOG2695|consen  227 HFSVG-LSQQVLLTNVETGHQ--QSFQ-SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQ-RLYHDSSV  301 (425)
T ss_pred             eeccc-ccceeEEEEeecccc--cccc-cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceE-EEEcCcch
Confidence            33344 466788999998763  2333 556799999999999999998 99999999986421  11222 22388999


Q ss_pred             eEEEEec-CCCeEEeeeCCcccceEEEEecCCCee---eeeeecCCCccccccccccccccceeEEEEEeeeecccccee
Q psy14511         84 KAIAWCP-WEPTLLATGGGICDQTVRLWNSMNGKE---KCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVL  159 (488)
Q Consensus        84 ~~l~~~~-~~~~l~~~~~~~~d~~i~vwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (488)
                      +++.... ++++|++++.   +|+|++||++--++   +.+..+|........+.                         
T Consensus       302 tslq~Lq~s~q~LmaS~M---~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~-------------------------  353 (425)
T KOG2695|consen  302 TSLQILQFSQQKLMASDM---TGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAH-------------------------  353 (425)
T ss_pred             hhhhhhccccceEeeccC---cCceeEeeehhhhcccceeeeecccccccccccc-------------------------
Confidence            9998776 6788888887   99999999987666   55665553211111110                         


Q ss_pred             ccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCC
Q psy14511        160 NQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTY  239 (488)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~  239 (488)
                                                                  +..+.+.+++++.|-..++|.++.+......+++..
T Consensus       354 --------------------------------------------v~~eeg~I~s~GdDcytRiWsl~~ghLl~tipf~~s  389 (425)
T KOG2695|consen  354 --------------------------------------------VKEEEGSIFSVGDDCYTRIWSLDSGHLLCTIPFPYS  389 (425)
T ss_pred             --------------------------------------------cccccceEEEccCeeEEEEEecccCceeeccCCCCc
Confidence                                                        222346688888999999999999998887776431


Q ss_pred             -CCCceEEEEEc
Q psy14511        240 -DNAYISCVAWK  250 (488)
Q Consensus       240 -~~~~i~~~~~~  250 (488)
                       ....+.+++|.
T Consensus       390 ~~e~d~~sv~~~  401 (425)
T KOG2695|consen  390 ASEVDIPSVAFD  401 (425)
T ss_pred             cccccccceehh
Confidence             12234455553

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=98.63  E-value=5e-05  Score=66.50  Aligned_cols=251  Identities=13%  Similarity=0.071  Sum_probs=127.7

Q ss_pred             CCCcEEEEEC---CCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccc
Q psy14511        207 GYHDTLAVAL---DTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTH  283 (488)
Q Consensus       207 ~~~~~~~~~~---d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~  283 (488)
                      .+.+++.++.   ...+++.|+.+++..++...++   .......++|+++.++.. .....|+-.|+++.+....+...
T Consensus        46 dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g---~~~~g~~~s~~~~~~~Yv-~~~~~l~~vdL~T~e~~~vy~~p  121 (386)
T PF14583_consen   46 DGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPG---DNTFGGFLSPDDRALYYV-KNGRSLRRVDLDTLEERVVYEVP  121 (386)
T ss_dssp             TS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS----B-TTT-EE-TTSSEEEEE-ETTTEEEEEETTT--EEEEEE--
T ss_pred             CCCEEEEEeccCCCcceEEEEcccCEEEECccCCC---CCccceEEecCCCeEEEE-ECCCeEEEEECCcCcEEEEEECC
Confidence            3456666663   5578889999999888776543   112245667888888766 45678889999987655544444


Q ss_pred             cccEEEEEe----cCCEEEEeec----------------------CCeEEEEECcCCCccceeeecCCccEEEEEEccCC
Q psy14511        284 MHQVIAMCW----NGNLLSCGTI----------------------GGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNG  337 (488)
Q Consensus       284 ~~~v~~~~~----~~~~l~~~~~----------------------dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~  337 (488)
                      ..-+-...|    ++..++..-.                      ...|.-.|+.+++  ...+......+..+.|+|..
T Consensus       122 ~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~--~~~v~~~~~wlgH~~fsP~d  199 (386)
T PF14583_consen  122 DDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGE--RKVVFEDTDWLGHVQFSPTD  199 (386)
T ss_dssp             TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT----EEEEEEESS-EEEEEEETTE
T ss_pred             cccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCc--eeEEEecCccccCcccCCCC
Confidence            433322333    4454433211                      1235555666543  34444455667889999955


Q ss_pred             -cEEEEEec---Ce--EEEEECCCC-CCCccccee-----e--eeecCCCCEEEEE---ccCCCCeEEEEeCCCcceeEE
Q psy14511        338 -RYLASGSN---NT--VKIWDFRQL-DAKRPLGLI-----V--PKLKREGRELVTS---HGKQDCSLKMWEYPRLHLIEE  400 (488)
Q Consensus       338 -~~l~~~~d---~~--i~iwd~~~~-~~~~~~~~~-----~--~~~~~~~~~l~~~---~g~~~~~i~i~d~~~~~~~~~  400 (488)
                       ..|+.|-+   ..  -+||-+++. ...+++...     +  .-|.|||..+..-   .+..+..|.-+|+.+++....
T Consensus       200 p~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~~~~~~  279 (386)
T PF14583_consen  200 PTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRMEGESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDTGERRRL  279 (386)
T ss_dssp             EEEEEEEE-S-TTTSS-SEEEEETTS---EESS---TTEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT--EEEE
T ss_pred             CCEEEEeccCCcceeceEEEEEEcCCCcceeeecCCCCcccccccccCCCCEEEEEeecCCCCceEEEeeCCCCCCceEE
Confidence             55666643   22  366765432 222222211     1  1899999988764   244455788889988865432


Q ss_pred             EeeccccEEEEEEcCCCCEEEEEeCCC----------------cEEEEecCCCCcccccccc---------C--CcceEE
Q psy14511        401 LKIHQERILSAVLSPDQTCVAAASADE----------------TISIWNCFPRDKKRKARQV---------G--SGSSLE  453 (488)
Q Consensus       401 ~~~~~~~v~~~~~s~~~~~l~t~~~dg----------------~v~iw~~~~~~~~~~~~~~---------~--~v~~~~  453 (488)
                      .  .......+--++||++++-=+.|.                -|++++++.++...+..|.         .  .=..+.
T Consensus       280 ~--~~p~~~H~~ss~Dg~L~vGDG~d~p~~v~~~~~~~~~~~p~i~~~~~~~~~~~~l~~h~~sw~v~~~~~q~~hPhp~  357 (386)
T PF14583_consen  280 M--EMPWCSHFMSSPDGKLFVGDGGDAPVDVADAGGYKIENDPWIYLFDVEAGRFRKLARHDTSWKVLDGDRQVTHPHPS  357 (386)
T ss_dssp             E--EE-SEEEEEE-TTSSEEEEEE-------------------EEEEEETTTTEEEEEEE-------BTTBSSTT----E
T ss_pred             E--eCCceeeeEEcCCCCEEEecCCCCCccccccccceecCCcEEEEeccccCceeeeeeccCcceeecCCCccCCCCCc
Confidence            2  222455677789999887644432                4667888876655333332         1  125788


Q ss_pred             eecCCCceEEEE
Q psy14511        454 FAILKQPVSLTA  465 (488)
Q Consensus       454 ~s~~~~~~~~~~  465 (488)
                      |+||++.+.+..
T Consensus       358 FSPDgk~VlF~S  369 (386)
T PF14583_consen  358 FSPDGKWVLFRS  369 (386)
T ss_dssp             E-TTSSEEEEEE
T ss_pred             cCCCCCEEEEEC
Confidence            999999996644

>PRK02888 nitrous-oxide reductase; Validated

Probab=98.60  E-value=7.1e-05  Score=69.72  Aligned_cols=203  Identities=13%  Similarity=0.119  Sum_probs=116.8

Q ss_pred             CCCeEEEEECCCCceEEEEecCCCCCCceEEEEEc--CCCCeEEEE-----------------eCCCCcEEEEECCccee
Q psy14511        216 LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWK--PRTTDLAVT-----------------NTCTEYIDLWHEQEERL  276 (488)
Q Consensus       216 ~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~l~~~-----------------~~~~~~i~i~d~~~~~~  276 (488)
                      ...+|...+++.-++.++++++  ....+..+++-  |+-.++++.                 .-..+.+.+.|..+.+.
T Consensus       150 ~n~Rvari~l~~~~~~~i~~iP--n~~~~Hg~~~~~~p~t~yv~~~~e~~~PlpnDGk~l~~~~ey~~~vSvID~etmeV  227 (635)
T PRK02888        150 ANTRVARIRLDVMKCDKITELP--NVQGIHGLRPQKIPRTGYVFCNGEFRIPLPNDGKDLDDPKKYRSLFTAVDAETMEV  227 (635)
T ss_pred             CCcceEEEECccEeeceeEeCC--CccCccccCccccCCccEEEeCcccccccCCCCCEeecccceeEEEEEEECccceE
Confidence            4667777787777777776665  23333333332  333344333                 22334455555555444


Q ss_pred             eeeecccc-ccEEEEEecCCEEEEeecC----CeEEEEECcCCCccceeeecCCccEEEEE--------EccCCcEEEEE
Q psy14511        277 IQKLRTHM-HQVIAMCWNGNLLSCGTIG----GNILHYDVRTHSDYPTAITREGDVVCGLK--------WSPNGRYLASG  343 (488)
Q Consensus       277 ~~~~~~~~-~~v~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~~~i~~~~--------~s~~~~~l~~~  343 (488)
                      ..++.-.. .....+..+++++++.+.+    ..+..-+...           .+  ..+.        +.++|++... 
T Consensus       228 ~~qV~Vdgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e-----------~d--~~vvfni~~iea~vkdGK~~~V-  293 (635)
T PRK02888        228 AWQVMVDGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAE-----------RD--WVVVFNIARIEEAVKAGKFKTI-  293 (635)
T ss_pred             EEEEEeCCCcccceECCCCCEEEEeccCcccCcceeeecccc-----------Cc--eEEEEchHHHHHhhhCCCEEEE-
Confidence            44332211 1122333356666555422    1122222211           11  2233        3457776665 


Q ss_pred             ecCeEEEEECCC-----CCCCccccee----eeeecCCCCEEEEEccCCCCeEEEEeCCCcce------------eEEEe
Q psy14511        344 SNNTVKIWDFRQ-----LDAKRPLGLI----VPKLKREGRELVTSHGKQDCSLKMWEYPRLHL------------IEELK  402 (488)
Q Consensus       344 ~d~~i~iwd~~~-----~~~~~~~~~~----~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~------------~~~~~  402 (488)
                      .++.|.+.|..+     .+....+...    -..++|||++++++ +..+.++.|+|+.+.+.            +.+.+
T Consensus       294 ~gn~V~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVa-nklS~tVSVIDv~k~k~~~~~~~~~~~~vvaeve  372 (635)
T PRK02888        294 GGSKVPVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIAN-GKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPE  372 (635)
T ss_pred             CCCEEEEEECCccccCCcceEEEEECCCCccceEECCCCCEEEEe-CCCCCcEEEEEChhhhhhhhccCCccceEEEeec
Confidence            457899999887     2221111111    11999999999997 77899999999988553            33333


Q ss_pred             eccccEEEEEEcCCCCEEEEEeCCCcEEEEecCC
Q psy14511        403 IHQERILSAVLSPDQTCVAAASADETISIWNCFP  436 (488)
Q Consensus       403 ~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~  436 (488)
                      - .......+|.++|....|..-|..|..|++..
T Consensus       373 v-GlGPLHTaFDg~G~aytslf~dsqv~kwn~~~  405 (635)
T PRK02888        373 L-GLGPLHTAFDGRGNAYTTLFLDSQIVKWNIEA  405 (635)
T ss_pred             c-CCCcceEEECCCCCEEEeEeecceeEEEehHH
Confidence            2 22345688999999888999999999999986

>KOG1275|consensus

Probab=98.59  E-value=1.6e-06  Score=81.75  Aligned_cols=175  Identities=17%  Similarity=0.197  Sum_probs=129.6

Q ss_pred             CCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecccccc
Q psy14511        207 GYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQ  286 (488)
Q Consensus       207 ~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~  286 (488)
                      ++..++-|+....+..+|+.+.+..+....   ....+.-+..  +++.+.+| ...|+|.+-|.++.+.++++.+|.+.
T Consensus       146 ~~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v---~a~~v~imR~--Nnr~lf~G-~t~G~V~LrD~~s~~~iht~~aHs~s  219 (1118)
T KOG1275|consen  146 GPSTLIMGGLQEKLIHIDLNTEKETRTTNV---SASGVTIMRY--NNRNLFCG-DTRGTVFLRDPNSFETIHTFDAHSGS  219 (1118)
T ss_pred             CCcceeecchhhheeeeecccceeeeeeec---cCCceEEEEe--cCcEEEee-cccceEEeecCCcCceeeeeeccccc
Confidence            456788888888999999999887777665   3334555553  56788888 99999999999999999999999999


Q ss_pred             EEEEEecCCEEEEeecC---------CeEEEEECcCCCccceeeecCCccEEEEEEccCC-cEEEEEe-cCeEEEEECCC
Q psy14511        287 VIAMCWNGNLLSCGTIG---------GNILHYDVRTHSDYPTAITREGDVVCGLKWSPNG-RYLASGS-NNTVKIWDFRQ  355 (488)
Q Consensus       287 v~~~~~~~~~l~~~~~d---------g~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~-d~~i~iwd~~~  355 (488)
                      +.++...|+.|++++..         .-|++||++..+ .+..+.-+.++ .-+.|+|.- ..+++++ .|...+-|..+
T Consensus       220 iSDfDv~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmr-al~PI~~~~~P-~flrf~Psl~t~~~V~S~sGq~q~vd~~~  297 (1118)
T KOG1275|consen  220 ISDFDVQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMR-ALSPIQFPYGP-QFLRFHPSLTTRLAVTSQSGQFQFVDTAT  297 (1118)
T ss_pred             eeeeeccCCeEEEeecccccccccccchhhhhhhhhhh-ccCCcccccCc-hhhhhcccccceEEEEecccceeeccccc
Confidence            99999999999998764         457899999864 33333333332 346788854 4555555 59999998443


Q ss_pred             CCCCc-------ccceeee--eecCCCCEEEEEccCCCCeEEEEe
Q psy14511        356 LDAKR-------PLGLIVP--KLKREGRELVTSHGKQDCSLKMWE  391 (488)
Q Consensus       356 ~~~~~-------~~~~~~~--~~~~~~~~l~~~~g~~~~~i~i~d  391 (488)
                      .....       +....+.  .++++++.++.  |..+|.|.+|.
T Consensus       298 lsNP~~~~~~v~p~~s~i~~fDiSsn~~alaf--gd~~g~v~~wa  340 (1118)
T KOG1275|consen  298 LSNPPAGVKMVNPNGSGISAFDISSNGDALAF--GDHEGHVNLWA  340 (1118)
T ss_pred             cCCCccceeEEccCCCcceeEEecCCCceEEE--ecccCcEeeec
Confidence            32221       1111111  88999999999  89999999997

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=98.58  E-value=0.00034  Score=66.17  Aligned_cols=236  Identities=11%  Similarity=0.019  Sum_probs=136.7

Q ss_pred             CcEEEEECCCeEEEEECCCCceEEEEecCCCCC--C-ce-EEEEEcCCCCeEEEEe--------CCCCcEEEEECCccee
Q psy14511        209 HDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDN--A-YI-SCVAWKPRTTDLAVTN--------TCTEYIDLWHEQEERL  276 (488)
Q Consensus       209 ~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~--~-~i-~~~~~~~~~~~l~~~~--------~~~~~i~i~d~~~~~~  276 (488)
                      +.+++++.++.|+-+|.++++..-...... ..  . .+ ....+.  +..++++.        ..++.+..+|..+++.
T Consensus       111 ~~V~v~~~~g~v~AlD~~TG~~~W~~~~~~-~~~~~~~i~ssP~v~--~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~  187 (488)
T cd00216         111 RKVFFGTFDGRLVALDAETGKQVWKFGNND-QVPPGYTMTGAPTIV--KKLVIIGSSGAEFFACGVRGALRAYDVETGKL  187 (488)
T ss_pred             CeEEEecCCCeEEEEECCCCCEeeeecCCC-CcCcceEecCCCEEE--CCEEEEeccccccccCCCCcEEEEEECCCCce
Confidence            678888899999999999999877666543 11  0 01 111222  23455551        1367889999999888


Q ss_pred             eeeeccccc--------------------cE-EEEEe--cCCEEEEeecCC------------------eEEEEECcCCC
Q psy14511        277 IQKLRTHMH--------------------QV-IAMCW--NGNLLSCGTIGG------------------NILHYDVRTHS  315 (488)
Q Consensus       277 ~~~~~~~~~--------------------~v-~~~~~--~~~~l~~~~~dg------------------~i~i~d~~~~~  315 (488)
                      +..++....                    .+ .....  .+..++.++.++                  .+.-+|..+++
T Consensus       188 ~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~  267 (488)
T cd00216         188 LWRFYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGK  267 (488)
T ss_pred             eeEeeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCC
Confidence            776643211                    01 11233  356777777665                  68888988876


Q ss_pred             ccceeeec-CCc----cEEEEEEc----cCCc---EEEEEe-cCeEEEEECCCCCCCccccee--eeeecCCCCEEEEEc
Q psy14511        316 DYPTAITR-EGD----VVCGLKWS----PNGR---YLASGS-NNTVKIWDFRQLDAKRPLGLI--VPKLKREGRELVTSH  380 (488)
Q Consensus       316 ~~~~~~~~-~~~----~i~~~~~s----~~~~---~l~~~~-d~~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~l~~~~  380 (488)
                      ..-..... +..    ......+.    -++.   .++.++ +|.+...|.++++..-.....  ....+|  ..+++..
T Consensus       268 ~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~~~~~~~~~--~~vyv~~  345 (488)
T cd00216         268 VKWFYQTTPHDLWDYDGPNQPSLADIKPKDGKPVPAIVHAPKNGFFYVLDRTTGKLISARPEVEQPMAYDP--GLVYLGA  345 (488)
T ss_pred             EEEEeeCCCCCCcccccCCCCeEEeccccCCCeeEEEEEECCCceEEEEECCCCcEeeEeEeeccccccCC--ceEEEcc
Confidence            43332211 110    00001111    1333   455665 599999999998654333221  113334  3333311


Q ss_pred             ----------------cCCCCeEEEEeCCCcceeEEEeecc--------ccEEEEEEcCCCCEEEEEeCCCcEEEEecCC
Q psy14511        381 ----------------GKQDCSLKMWEYPRLHLIEELKIHQ--------ERILSAVLSPDQTCVAAASADETISIWNCFP  436 (488)
Q Consensus       381 ----------------g~~~~~i~i~d~~~~~~~~~~~~~~--------~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~  436 (488)
                                      ...+|.+.-.|+.+|+.+-+.....        .+...-.....+..|+.++.||.|+.+|..+
T Consensus       346 ~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~~g~~v~~g~~dG~l~ald~~t  425 (488)
T cd00216         346 FHIPLGLPPQKKKRCKKPGKGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLATAGNLVFAGAADGYFRAFDATT  425 (488)
T ss_pred             ccccccCcccccCCCCCCCceEEEEEeCCCCcEeeEeeCCccccccccCCcccCcceEecCCeEEEECCCCeEEEEECCC
Confidence                            1246789999999998877665321        1111111112567888999999999999999


Q ss_pred             CCccccccccCCc
Q psy14511        437 RDKKRKARQVGSG  449 (488)
Q Consensus       437 ~~~~~~~~~~~~v  449 (488)
                      ++.+-.....+.+
T Consensus       426 G~~lW~~~~~~~~  438 (488)
T cd00216         426 GKELWKFRTPSGI  438 (488)
T ss_pred             CceeeEEECCCCc
Confidence            9988544444443

The alignment model contains an 8-bladed beta-propeller.

>KOG1832|consensus

Probab=98.57  E-value=8.6e-08  Score=89.68  Aligned_cols=209  Identities=13%  Similarity=0.179  Sum_probs=126.4

Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCC-cEEEEECCc-ceeeeeeccccccEEEEEec--CCEEEEeecCCeEEEEECcCCC
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTE-YIDLWHEQE-ERLIQKLRTHMHQVIAMCWN--GNLLSCGTIGGNILHYDVRTHS  315 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~-~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~  315 (488)
                      |...++.+.-+.+|..+++.++... -..+|++.. +.+.+.+.+    -.++.|.  -..-+.|+......+||+++..
T Consensus      1142 H~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~s~~~~~Hsf~e----d~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~ 1217 (1516)
T KOG1832|consen 1142 HQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDASSTGGPRHSFDE----DKAVKFSNSLQFRALGTEADDALLYDVQTCS 1217 (1516)
T ss_pred             cccccccccccCCcceeeeeccccCchHHHhccccccCccccccc----cceeehhhhHHHHHhcccccceEEEecccCc
Confidence            7778888888888888777634433 577898765 333344432    3456662  2233445555678999999876


Q ss_pred             ccceeeec---CCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccceeee----eecCCCCEEEEEccCCCCeEE
Q psy14511        316 DYPTAITR---EGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVP----KLKREGRELVTSHGKQDCSLK  388 (488)
Q Consensus       316 ~~~~~~~~---~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~----~~~~~~~~l~~~~g~~~~~i~  388 (488)
                      .+...+.+   .+-.-+...|+|+.+++.--  |  .+||++..+..+.+..+..    .|+|.|..++.  .     -.
T Consensus      1218 ~l~tylt~~~~~~y~~n~a~FsP~D~LIlnd--G--vLWDvR~~~aIh~FD~ft~~~~G~FHP~g~eVII--N-----SE 1286 (1516)
T KOG1832|consen 1218 PLQTYLTDTVTSSYSNNLAHFSPCDTLILND--G--VLWDVRIPEAIHRFDQFTDYGGGGFHPSGNEVII--N-----SE 1286 (1516)
T ss_pred             HHHHhcCcchhhhhhccccccCCCcceEeeC--c--eeeeeccHHHHhhhhhheecccccccCCCceEEe--e-----ch
Confidence            54443332   22223678899998877632  2  5899998866665555533    99999999998  2     36


Q ss_pred             EEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEe--CC---------------CcEEEEecCCCCccccccccCCcce
Q psy14511        389 MWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAAS--AD---------------ETISIWNCFPRDKKRKARQVGSGSS  451 (488)
Q Consensus       389 i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~--~d---------------g~v~iw~~~~~~~~~~~~~~~~v~~  451 (488)
                      |||+++.+++.....-..  ..+.|...|..+...-  .|               ...+-++...-..+........+..
T Consensus      1287 IwD~RTF~lLh~VP~Ldq--c~VtFNstG~VmYa~~~~~d~~sdvh~~r~k~p~fSSFRTf~a~dYs~iaTi~v~R~~~D 1364 (1516)
T KOG1832|consen 1287 IWDMRTFKLLHSVPSLDQ--CAVTFNSTGDVMYAMLNIEDVMSDVHTRRVKHPLFSSFRTFDAIDYSDIATIPVDRCLLD 1364 (1516)
T ss_pred             hhhhHHHHHHhcCccccc--eEEEeccCccchhhhhhhhhhhhhhcccccccchhhhhccccccccccceeeecccchhh
Confidence            999999888766543322  4567777676544322  00               1223333333333444444455556


Q ss_pred             EEeecCCCceEEEE
Q psy14511        452 LEFAILKQPVSLTA  465 (488)
Q Consensus       452 ~~~s~~~~~~~~~~  465 (488)
                      ++-.|....+....
T Consensus      1365 lct~~~D~~l~vIe 1378 (1516)
T KOG1832|consen 1365 LCTEPTDSFLGVIE 1378 (1516)
T ss_pred             hhcCCccceEEEEe
Confidence            66666665554433

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=98.57  E-value=7.8e-05  Score=68.06  Aligned_cols=159  Identities=20%  Similarity=0.284  Sum_probs=99.5

Q ss_pred             CeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEE--ECCcceeeeeecccccc--EEEEEec
Q psy14511        218 TSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLW--HEQEERLIQKLRTHMHQ--VIAMCWN  293 (488)
Q Consensus       218 ~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~--d~~~~~~~~~~~~~~~~--v~~~~~~  293 (488)
                      ..++++++.+++........+    .-...+|+|||+.++.+...+|...+|  |+..+...+ +....+.  -.++..|
T Consensus       218 ~~i~~~~l~~g~~~~i~~~~g----~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~~-Lt~~~gi~~~Ps~spd  292 (425)
T COG0823         218 PRIYYLDLNTGKRPVILNFNG----NNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLPR-LTNGFGINTSPSWSPD  292 (425)
T ss_pred             ceEEEEeccCCccceeeccCC----ccCCccCCCCCCEEEEEECCCCCccEEEEcCCCCccee-cccCCccccCccCCCC
Confidence            469999999998888777544    344568999999999887777765555  666655333 4322222  2333448


Q ss_pred             CCEEEEeec-CC--eEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe--cCe--EEEEECCCCCCCcccce--
Q psy14511        294 GNLLSCGTI-GG--NILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--NNT--VKIWDFRQLDAKRPLGL--  364 (488)
Q Consensus       294 ~~~l~~~~~-dg--~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--d~~--i~iwd~~~~~~~~~~~~--  364 (488)
                      |+.++..+. .|  .|.+++.+....  ..+......-....|+|||++++..+  +|.  |.+.|+.+....+.+..  
T Consensus       293 G~~ivf~Sdr~G~p~I~~~~~~g~~~--~riT~~~~~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~~~~lt~~~  370 (425)
T COG0823         293 GSKIVFTSDRGGRPQIYLYDLEGSQV--TRLTFSGGGNSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGGKIRILTSTY  370 (425)
T ss_pred             CCEEEEEeCCCCCcceEEECCCCCce--eEeeccCCCCcCccCCCCCCEEEEEeccCCceeeEEeccCCCCcEEEccccc
Confidence            888776654 34  466666665432  33333322223678999999999887  355  66666655542121111  


Q ss_pred             --eeeeecCCCCEEEEEccCC
Q psy14511        365 --IVPKLKREGRELVTSHGKQ  383 (488)
Q Consensus       365 --~~~~~~~~~~~l~~~~g~~  383 (488)
                        ....+.++++.++..++..
T Consensus       371 ~~e~ps~~~ng~~i~~~s~~~  391 (425)
T COG0823         371 LNESPSWAPNGRMIMFSSGQG  391 (425)
T ss_pred             cCCCCCcCCCCceEEEeccCC
Confidence              1238889999888865444

>KOG3621|consensus

Probab=98.55  E-value=2.9e-05  Score=71.54  Aligned_cols=108  Identities=16%  Similarity=0.210  Sum_probs=83.5

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccc---ccc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNN---QCH   79 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~---~~h   79 (488)
                      .+++++.|++-|.+.+|+-..++.......+-.+.+..+..|++..++|.|+ .|.|.|+-+...........-   ..|
T Consensus        44 t~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~~~t~~d~~~  123 (726)
T KOG3621|consen   44 TEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLDYVTPCDKSH  123 (726)
T ss_pred             CCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcceeeccccccC
Confidence            6889999999999999998888755444455566777888999998988888 799999988764333222221   226


Q ss_pred             ccceeEEEEecCCCeEEeeeCCcccceEEEEecCC
Q psy14511         80 LSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMN  114 (488)
Q Consensus        80 ~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~  114 (488)
                      ...|++++|++|+..+++..+   .|+|.+-.++.
T Consensus       124 ~~rVTal~Ws~~~~k~ysGD~---~Gkv~~~~L~s  155 (726)
T KOG3621|consen  124 KCRVTALEWSKNGMKLYSGDS---QGKVVLTELDS  155 (726)
T ss_pred             CceEEEEEecccccEEeecCC---CceEEEEEech
Confidence            789999999999988777665   88998888766

>KOG2695|consensus

Probab=98.55  E-value=4.5e-07  Score=75.60  Aligned_cols=119  Identities=18%  Similarity=0.312  Sum_probs=91.9

Q ss_pred             CCceEEEeecCCeEEEEEcccCc---ccceeecccCceEEEEEEcc-CCcEEEEec-CCeEEEEeccccCcCCCcccccc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHS---DYPTAITREGDVVCGLKWSP-NGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQC   78 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~---~~~~~~~~h~~~V~~l~~sp-~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~   78 (488)
                      .++++..|..+|.|..+|+....   ......--|...|+++..-. ++.+|.+.+ +|.|++||.+--+....+....|
T Consensus       263 s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rlyh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeG  342 (425)
T KOG2695|consen  263 SDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLYHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEG  342 (425)
T ss_pred             cCCeeEecccCCcEEEEEeeecccCCCcceEEEEcCcchhhhhhhccccceEeeccCcCceeEeeehhhhcccceeeeec
Confidence            47899999999999999998651   12233446889999998877 788888777 99999999987666566777888


Q ss_pred             cccceeEEEE--ecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCC
Q psy14511         79 HLSAVKAIAW--CPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDS  125 (488)
Q Consensus        79 h~~~v~~l~~--~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~  125 (488)
                      |.+.-.-+-+  .+....++++|.   |...++|.+..|..+.++....
T Consensus       343 HvN~~a~l~~~v~~eeg~I~s~Gd---DcytRiWsl~~ghLl~tipf~~  388 (425)
T KOG2695|consen  343 HVNLSAYLPAHVKEEEGSIFSVGD---DCYTRIWSLDSGHLLCTIPFPY  388 (425)
T ss_pred             ccccccccccccccccceEEEccC---eeEEEEEecccCceeeccCCCC
Confidence            8765444333  455567777666   9999999999999988877653

>KOG1920|consensus

Probab=98.53  E-value=8.5e-05  Score=72.95  Aligned_cols=223  Identities=11%  Similarity=0.177  Sum_probs=129.5

Q ss_pred             CCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecc----
Q psy14511        207 GYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRT----  282 (488)
Q Consensus       207 ~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~----  282 (488)
                      ..+.++.+...|.|.+-|..+......-.    -...|.+++|+||+..++.. +..+++.+-+ .+..++....-    
T Consensus        79 d~~~i~v~~~~G~iilvd~et~~~eivg~----vd~GI~aaswS~Dee~l~li-T~~~tll~mT-~~f~~i~E~~L~~d~  152 (1265)
T KOG1920|consen   79 DTNSICVITALGDIILVDPETLELEIVGN----VDNGISAASWSPDEELLALI-TGRQTLLFMT-KDFEPIAEKPLDADD  152 (1265)
T ss_pred             ccceEEEEecCCcEEEEcccccceeeeee----ccCceEEEeecCCCcEEEEE-eCCcEEEEEe-ccccchhcccccccc
Confidence            45778888899999999888776554443    56689999999999999998 7777775543 22222221111    


Q ss_pred             -ccccEEEEEec-CCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEE-----ec-CeEEEEECC
Q psy14511        283 -HMHQVIAMCWN-GNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASG-----SN-NTVKIWDFR  354 (488)
Q Consensus       283 -~~~~v~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-----~d-~~i~iwd~~  354 (488)
                       ..+....+-|. ...-+-|+ .|.....+.....+.......++ .-..+.|--||+++|+.     .+ ..|++||-+
T Consensus       153 ~~~sk~v~VGwGrkeTqfrgs-~gr~~~~~~~~~ek~~~~~~~~~-~~~~IsWRgDg~~fAVs~~~~~~~~RkirV~drE  230 (1265)
T KOG1920|consen  153 ERKSKFVNVGWGRKETQFRGS-EGRQAARQKIEKEKALEQIEQDD-HKTSISWRGDGEYFAVSFVESETGTRKIRVYDRE  230 (1265)
T ss_pred             ccccccceecccccceeeecc-hhhhcccccccccccccchhhcc-CCceEEEccCCcEEEEEEEeccCCceeEEEeccc
Confidence             11222223331 11111111 11111111111111111111122 23468999999999983     34 789999987


Q ss_pred             CCCCCc-----ccceeeeeecCCCCEEEEEc-cCCCCeEEEEeCCC---cceeEEEeeccccEEEEEEcCCCCEEEE---
Q psy14511        355 QLDAKR-----PLGLIVPKLKREGRELVTSH-GKQDCSLKMWEYPR---LHLIEELKIHQERILSAVLSPDQTCVAA---  422 (488)
Q Consensus       355 ~~~~~~-----~~~~~~~~~~~~~~~l~~~~-g~~~~~i~i~d~~~---~~~~~~~~~~~~~v~~~~~s~~~~~l~t---  422 (488)
                       +....     ......-+|-|.|..+++.- -..++.|.+|.-..   ++....+.....+|..++|+.++..||+   
T Consensus       231 -g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL~hg~f~l~~p~de~~ve~L~Wns~sdiLAv~~~  309 (1265)
T KOG1920|consen  231 -GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGLRHGEFVLPFPLDEKEVEELAWNSNSDILAVVTS  309 (1265)
T ss_pred             -chhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecCCccccccccCCcccccchheeeecCCCCceeeeec
Confidence             32211     11122338999999998862 23355788887432   2222223333445899999999999998   


Q ss_pred             EeCCCcEEEEecCCCC
Q psy14511        423 ASADETISIWNCFPRD  438 (488)
Q Consensus       423 ~~~dg~v~iw~~~~~~  438 (488)
                      ......|++|-+.+-.
T Consensus       310 ~~e~~~v~lwt~~Nyh  325 (1265)
T KOG1920|consen  310 NLENSLVQLWTTGNYH  325 (1265)
T ss_pred             ccccceEEEEEecCeE
Confidence            4445569999987644

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=98.52  E-value=0.00053  Score=64.94  Aligned_cols=180  Identities=12%  Similarity=0.081  Sum_probs=101.7

Q ss_pred             CCCeEEEEECCCCceEEEEecCCCCC-----------------Cce-EEEEEcCCCCeEEEEeCCCC-------------
Q psy14511        216 LDTSVYTWNTKTNKTQLLVEYPTYDN-----------------AYI-SCVAWKPRTTDLAVTNTCTE-------------  264 (488)
Q Consensus       216 ~d~~v~iw~~~~~~~~~~~~~~~~~~-----------------~~i-~~~~~~~~~~~l~~~~~~~~-------------  264 (488)
                      .++.+.-+|..+++..-.........                 ..+ ...++.+.+..++++ +.++             
T Consensus       173 ~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~g~V~vg-~~~g~~~~~~~~~~~~~  251 (488)
T cd00216         173 VRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKTNLVYVG-TGNGSPWNWGGRRTPGD  251 (488)
T ss_pred             CCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCCCEEEEE-CCCCCCCccCCccCCCC
Confidence            46788888888888766554421000                 001 134555566677777 6554             


Q ss_pred             -----cEEEEECCcceeeeeeccccc----------c-EEEEE-ecCC---EEEEeecCCeEEEEECcCCCccceeeecC
Q psy14511        265 -----YIDLWHEQEERLIQKLRTHMH----------Q-VIAMC-WNGN---LLSCGTIGGNILHYDVRTHSDYPTAITRE  324 (488)
Q Consensus       265 -----~i~i~d~~~~~~~~~~~~~~~----------~-v~~~~-~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~  324 (488)
                           .|.-+|..+++....++.-..          + +..+. .++.   .++.++.+|.++..|.++++..-..-...
T Consensus       252 ~~~~~~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~~  331 (488)
T cd00216         252 NLYTDSIVALDADTGKVKWFYQTTPHDLWDYDGPNQPSLADIKPKDGKPVPAIVHAPKNGFFYVLDRTTGKLISARPEVE  331 (488)
T ss_pred             CCceeeEEEEcCCCCCEEEEeeCCCCCCcccccCCCCeEEeccccCCCeeEEEEEECCCceEEEEECCCCcEeeEeEeec
Confidence                 688999999988877642111          1 11111 2343   67888899999999999976433221110


Q ss_pred             CccEEEEEEccCCcEEEEE-----------------e-cCeEEEEECCCCCCCccccee-------------eeeecCCC
Q psy14511        325 GDVVCGLKWSPNGRYLASG-----------------S-NNTVKIWDFRQLDAKRPLGLI-------------VPKLKREG  373 (488)
Q Consensus       325 ~~~i~~~~~s~~~~~l~~~-----------------~-d~~i~iwd~~~~~~~~~~~~~-------------~~~~~~~~  373 (488)
                          ..++.+| +...+..                 . +|.+.-.|+.+++..-.....             .......+
T Consensus       332 ----~~~~~~~-~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~~g  406 (488)
T cd00216         332 ----QPMAYDP-GLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLATAG  406 (488)
T ss_pred             ----cccccCC-ceEEEccccccccCcccccCCCCCCCceEEEEEeCCCCcEeeEeeCCccccccccCCcccCcceEecC
Confidence                1122233 1111110                 1 255656666555432111111             01122345


Q ss_pred             CEEEEEccCCCCeEEEEeCCCcceeEEEee
Q psy14511        374 RELVTSHGKQDCSLKMWEYPRLHLIEELKI  403 (488)
Q Consensus       374 ~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~  403 (488)
                      ..+++  ++.+|.++.+|.++|+.+.+.+-
T Consensus       407 ~~v~~--g~~dG~l~ald~~tG~~lW~~~~  434 (488)
T cd00216         407 NLVFA--GAADGYFRAFDATTGKELWKFRT  434 (488)
T ss_pred             CeEEE--ECCCCeEEEEECCCCceeeEEEC
Confidence            66666  67899999999999999888764

The alignment model contains an 8-bladed beta-propeller.

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=98.51  E-value=5.7e-05  Score=69.15  Aligned_cols=221  Identities=13%  Similarity=0.177  Sum_probs=116.4

Q ss_pred             ccCceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecC
Q psy14511         34 REGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSM  113 (488)
Q Consensus        34 ~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~  113 (488)
                      ........+.++|+|++++.++||.-.|+....   .+.     ...+.-....|.+.++ +++...   .++|.++.--
T Consensus        30 ~~~~~p~~ls~npngr~v~V~g~geY~iyt~~~---~r~-----k~~G~g~~~vw~~~n~-yAv~~~---~~~I~I~kn~   97 (443)
T PF04053_consen   30 SCEIYPQSLSHNPNGRFVLVCGDGEYEIYTALA---WRN-----KAFGSGLSFVWSSRNR-YAVLES---SSTIKIYKNF   97 (443)
T ss_dssp             E-SS--SEEEE-TTSSEEEEEETTEEEEEETTT---TEE-----EEEEE-SEEEE-TSSE-EEEE-T---TS-EEEEETT
T ss_pred             CCCcCCeeEEECCCCCEEEEEcCCEEEEEEccC---Ccc-----cccCceeEEEEecCcc-EEEEEC---CCeEEEEEcC
Confidence            344457889999999999999999999988332   111     1235566788998665 344443   6788886322


Q ss_pred             CCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCC
Q psy14511        114 NGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAP  193 (488)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (488)
                      +......+....                                                                    
T Consensus        98 ~~~~~k~i~~~~--------------------------------------------------------------------  109 (443)
T PF04053_consen   98 KNEVVKSIKLPF--------------------------------------------------------------------  109 (443)
T ss_dssp             EE-TT-----SS--------------------------------------------------------------------
T ss_pred             ccccceEEcCCc--------------------------------------------------------------------
Confidence            221111111110                                                                    


Q ss_pred             CccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCc
Q psy14511        194 SIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE  273 (488)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~  273 (488)
                            .+..+ | ++.++....++.|.+||+.+++.+..+...     +|..+.|++++.+++.. + +..+.+++.+.
T Consensus       110 ------~~~~I-f-~G~LL~~~~~~~i~~yDw~~~~~i~~i~v~-----~vk~V~Ws~~g~~val~-t-~~~i~il~~~~  174 (443)
T PF04053_consen  110 ------SVEKI-F-GGNLLGVKSSDFICFYDWETGKLIRRIDVS-----AVKYVIWSDDGELVALV-T-KDSIYILKYNL  174 (443)
T ss_dssp             -------EEEE-E--SSSEEEEETTEEEEE-TTT--EEEEESS------E-EEEEE-TTSSEEEEE---S-SEEEEEE-H
T ss_pred             ------ccceE-E-cCcEEEEECCCCEEEEEhhHcceeeEEecC-----CCcEEEEECCCCEEEEE-e-CCeEEEEEecc
Confidence                  00000 0 156777777779999999999988887642     48999999999999998 4 44677776544


Q ss_pred             c-----------eeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEE
Q psy14511        274 E-----------RLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLAS  342 (488)
Q Consensus       274 ~-----------~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~  342 (488)
                      .           .....+..-...|.+..|+++.++-.+.. .++.  +..+.  ...+..-..++.-+...|..+.+..
T Consensus       175 ~~~~~~~~~g~e~~f~~~~E~~~~IkSg~W~~d~fiYtT~~-~lkY--l~~Ge--~~~i~~ld~~~yllgy~~~~~~ly~  249 (443)
T PF04053_consen  175 EAVAAIPEEGVEDAFELIHEISERIKSGCWVEDCFIYTTSN-HLKY--LVNGE--TGIIAHLDKPLYLLGYLPKENRLYL  249 (443)
T ss_dssp             HHHHHBTTTB-GGGEEEEEEE-S--SEEEEETTEEEEE-TT-EEEE--EETTE--EEEEEE-SS--EEEEEETTTTEEEE
T ss_pred             hhcccccccCchhceEEEEEecceeEEEEEEcCEEEEEcCC-eEEE--EEcCC--cceEEEcCCceEEEEEEccCCEEEE
Confidence            3           02233333356788888876665555555 5655  33332  2233333455666677776666666


Q ss_pred             Ee-cCeEEEEECC
Q psy14511        343 GS-NNTVKIWDFR  354 (488)
Q Consensus       343 ~~-d~~i~iwd~~  354 (488)
                      .. ++.+..+.+.
T Consensus       250 ~Dr~~~v~~~~ld  262 (443)
T PF04053_consen  250 IDRDGNVISYELD  262 (443)
T ss_dssp             E-TT--EEEEE--
T ss_pred             EECCCCEEEEEEC
Confidence            65 4677766654

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>KOG1832|consensus

Probab=98.49  E-value=1.4e-07  Score=88.31  Aligned_cols=183  Identities=14%  Similarity=0.202  Sum_probs=136.3

Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCC--eEEEEECcCCC
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGG--NILHYDVRTHS  315 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg--~i~i~d~~~~~  315 (488)
                      +....+|++|+-+.++|++| +..|.|++|+..+|.......+|...++-+.+  +|..+++.+.-.  ...+|++....
T Consensus      1100 ~~~~fTc~afs~~~~hL~vG-~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~s~~ 1178 (1516)
T KOG1832|consen 1100 ETALFTCIAFSGGTNHLAVG-SHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDASSTG 1178 (1516)
T ss_pred             cccceeeEEeecCCceEEee-eccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHHhcccccc
Confidence            67789999999999999999 99999999999999999999999999999998  777666654432  46789987644


Q ss_pred             ccceeeecCCccEEEEEEccCCcEEEEEec-CeEEEEECCCCCCCccc-ce--------eeeeecCCCCEEEEEccCCCC
Q psy14511        316 DYPTAITREGDVVCGLKWSPNGRYLASGSN-NTVKIWDFRQLDAKRPL-GL--------IVPKLKREGRELVTSHGKQDC  385 (488)
Q Consensus       316 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d-~~i~iwd~~~~~~~~~~-~~--------~~~~~~~~~~~l~~~~g~~~~  385 (488)
                      .....+.+    -.++.|+.....-+.|.. ....+||+.+......+ ..        ....|+|+.++++-     ||
T Consensus      1179 ~~~Hsf~e----d~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~D~LIln-----dG 1249 (1516)
T KOG1832|consen 1179 GPRHSFDE----DKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPCDTLILN-----DG 1249 (1516)
T ss_pred             Cccccccc----cceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCCCcceEee-----Cc
Confidence            44444443    336788876555555654 78999999988544331 11        12389999888876     44


Q ss_pred             eEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcc
Q psy14511        386 SLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKK  440 (488)
Q Consensus       386 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~  440 (488)
                        .+||++..+.+..+...+. -..-.|+|.|..++.-+     .|||+.+-+.+
T Consensus      1250 --vLWDvR~~~aIh~FD~ft~-~~~G~FHP~g~eVIINS-----EIwD~RTF~lL 1296 (1516)
T KOG1832|consen 1250 --VLWDVRIPEAIHRFDQFTD-YGGGGFHPSGNEVIINS-----EIWDMRTFKLL 1296 (1516)
T ss_pred             --eeeeeccHHHHhhhhhhee-cccccccCCCceEEeec-----hhhhhHHHHHH
Confidence              4799988777766654442 22346999999988876     58998876654

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=98.46  E-value=1.8e-05  Score=72.17  Aligned_cols=183  Identities=16%  Similarity=0.168  Sum_probs=113.8

Q ss_pred             CCCceEEEEEcCCCCeEEEEeC--CC-CcEEEEECCcceeeeeec-cccccEEEEEecCCEEEE-eecCCe--EEEEECc
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNT--CT-EYIDLWHEQEERLIQKLR-THMHQVIAMCWNGNLLSC-GTIGGN--ILHYDVR  312 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~--~~-~~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~~~l~~-~~~dg~--i~i~d~~  312 (488)
                      ....+..-+|+|++..++...-  .. ..+.++++.+++...... .........++||+.|+. ...||.  |+++|+.
T Consensus       191 ~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~~g~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~  270 (425)
T COG0823         191 SGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNFNGNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLD  270 (425)
T ss_pred             cCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeeccCCccCCccCCCCCCEEEEEECCCCCccEEEEcCC
Confidence            4456777889999987665422  22 458899998876655554 122333455557766655 455554  6667777


Q ss_pred             CCCccceeeecCCccEEEEEEccCCcEEEEEec--Ce--EEEEECCCCCCCccccee----eeeecCCCCEEEEEccCCC
Q psy14511        313 THSDYPTAITREGDVVCGLKWSPNGRYLASGSN--NT--VKIWDFRQLDAKRPLGLI----VPKLKREGRELVTSHGKQD  384 (488)
Q Consensus       313 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d--~~--i~iwd~~~~~~~~~~~~~----~~~~~~~~~~l~~~~g~~~  384 (488)
                      ...  ...+....+.-..-.|+|||++++..+|  |.  |.+++.+.....+.....    ...++|||++++..+ ..+
T Consensus       271 ~~~--~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~riT~~~~~~~~p~~SpdG~~i~~~~-~~~  347 (425)
T COG0823         271 GKN--LPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQVTRLTFSGGGNSNPVWSPDGDKIVFES-SSG  347 (425)
T ss_pred             CCc--ceecccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCceeEeeccCCCCcCccCCCCCCEEEEEe-ccC
Confidence            643  3334444444446789999999999986  54  555555544332211111    348999999999974 334


Q ss_pred             Ce--EEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCC
Q psy14511        385 CS--LKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASAD  426 (488)
Q Consensus       385 ~~--i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~d  426 (488)
                      |.  |.+.|+.++...+.+. +........|.|+++.+...+..
T Consensus       348 g~~~i~~~~~~~~~~~~~lt-~~~~~e~ps~~~ng~~i~~~s~~  390 (425)
T COG0823         348 GQWDIDKNDLASGGKIRILT-STYLNESPSWAPNGRMIMFSSGQ  390 (425)
T ss_pred             CceeeEEeccCCCCcEEEcc-ccccCCCCCcCCCCceEEEeccC
Confidence            55  7777777665443333 34445567888898887765544

>KOG3621|consensus

Probab=98.39  E-value=0.00019  Score=66.41  Aligned_cols=75  Identities=17%  Similarity=0.149  Sum_probs=53.0

Q ss_pred             cCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecC
Q psy14511         35 EGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSM  113 (488)
Q Consensus        35 h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~  113 (488)
                      |...|.--+++..+++|+.|+ -|.+++++-.++....  ....+-.+.+..+..+++. ++++.|.+  .|.|.++.+.
T Consensus        32 ~~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~--~~~~~~~~~~~~~~vs~~e-~lvAagt~--~g~V~v~ql~  106 (726)
T KOG3621|consen   32 FPARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRK--LKNEGATGITCVRSVSSVE-YLVAAGTA--SGRVSVFQLN  106 (726)
T ss_pred             CcceEEEEEeecCCceEEEecccceEEEEecCchhhhc--ccccCccceEEEEEecchh-HhhhhhcC--CceEEeehhh
Confidence            555677778888899999998 7999999987654332  2233344566667778776 55666664  8888888776


Q ss_pred             C
Q psy14511        114 N  114 (488)
Q Consensus       114 ~  114 (488)
                      .
T Consensus       107 ~  107 (726)
T KOG3621|consen  107 K  107 (726)
T ss_pred             c
Confidence            5

>KOG3617|consensus

Probab=98.39  E-value=3.4e-05  Score=72.63  Aligned_cols=101  Identities=16%  Similarity=0.289  Sum_probs=73.9

Q ss_pred             CCceEEEee----cCCeEEEEEcccCccc-ceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCccccc
Q psy14511          4 NGNLLSCGT----IGGNILHYDVRTHSDY-PTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQ   77 (488)
Q Consensus         4 dg~~la~g~----~dg~i~iwd~~~~~~~-~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~   77 (488)
                      ..-++|+++    ..|+|.||- +++++. .....-|   +++++|+|..-.||.|- -|.+.+|...+.+   .-....
T Consensus        26 sePlfAVA~fS~er~GSVtIfa-dtGEPqr~Vt~P~h---atSLCWHpe~~vLa~gwe~g~~~v~~~~~~e---~htv~~   98 (1416)
T KOG3617|consen   26 SEPLFAVASFSPERGGSVTIFA-DTGEPQRDVTYPVH---ATSLCWHPEEFVLAQGWEMGVSDVQKTNTTE---THTVVE   98 (1416)
T ss_pred             CCceeEEEEecCCCCceEEEEe-cCCCCCccccccee---hhhhccChHHHHHhhccccceeEEEecCCce---eeeecc
Confidence            456777775    678899985 344422 1223334   56799999988888886 7999999987633   222245


Q ss_pred             ccccceeEEEEecCCCeEEeeeCCcccceEEEEecCC
Q psy14511         78 CHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMN  114 (488)
Q Consensus        78 ~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~  114 (488)
                      .|..+|..+.||++|..+++...   -|.+.+|....
T Consensus        99 th~a~i~~l~wS~~G~~l~t~d~---~g~v~lwr~d~  132 (1416)
T KOG3617|consen   99 THPAPIQGLDWSHDGTVLMTLDN---PGSVHLWRYDV  132 (1416)
T ss_pred             CCCCCceeEEecCCCCeEEEcCC---CceeEEEEeee
Confidence            69999999999999987766655   89999998763

>KOG1920|consensus

Probab=98.37  E-value=0.0006  Score=67.35  Aligned_cols=112  Identities=15%  Similarity=0.314  Sum_probs=73.3

Q ss_pred             eEEEEEcCCCCeEEEEe---CCC-CcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEee---cCCeEEEEECcCC
Q psy14511        244 ISCVAWKPRTTDLAVTN---TCT-EYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGT---IGGNILHYDVRTH  314 (488)
Q Consensus       244 i~~~~~~~~~~~l~~~~---~~~-~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~---~dg~i~i~d~~~~  314 (488)
                      =+.+.|--||.++++..   ..+ ..|++||.+ +..-..-....+.-.+++|  .|..+++-.   .|+.|.++.-+..
T Consensus       198 ~~~IsWRgDg~~fAVs~~~~~~~~RkirV~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL  276 (1265)
T KOG1920|consen  198 KTSISWRGDGEYFAVSFVESETGTRKIRVYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGL  276 (1265)
T ss_pred             CceEEEccCCcEEEEEEEeccCCceeEEEeccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecCCc
Confidence            34689999999999842   123 789999976 3332222223334456777  677777753   4557888876543


Q ss_pred             Cc--cceeeecCCccEEEEEEccCCcEEEE---Eec-CeEEEEECCCC
Q psy14511        315 SD--YPTAITREGDVVCGLKWSPNGRYLAS---GSN-NTVKIWDFRQL  356 (488)
Q Consensus       315 ~~--~~~~~~~~~~~i~~~~~s~~~~~l~~---~~d-~~i~iwd~~~~  356 (488)
                      ..  ....+.....++..++|+.++..||+   ... ..|++|-+.+.
T Consensus       277 ~hg~f~l~~p~de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~Ny  324 (1265)
T KOG1920|consen  277 RHGEFVLPFPLDEKEVEELAWNSNSDILAVVTSNLENSLVQLWTTGNY  324 (1265)
T ss_pred             cccccccCCcccccchheeeecCCCCceeeeecccccceEEEEEecCe
Confidence            21  22223334445899999999999998   334 45999988764

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=98.30  E-value=0.0026  Score=58.53  Aligned_cols=70  Identities=16%  Similarity=0.106  Sum_probs=46.2

Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccc-cccEEEEEecCCEEEEeecCCeEEEEE
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTH-MHQVIAMCWNGNLLSCGTIGGNILHYD  310 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~-~~~v~~~~~~~~~l~~~~~dg~i~i~d  310 (488)
                      ..+++..+++||++++++.- ..+|.+.+....-.+....+... ......+.|-|+-.+.......+.+..
T Consensus       215 ~~~~i~~iavSpng~~iAl~-t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~dav~l~~~~~l~lvg  285 (410)
T PF04841_consen  215 SDGPIIKIAVSPNGKFIALF-TDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGNDAVVLSWEDELLLVG  285 (410)
T ss_pred             CCCCeEEEEECCCCCEEEEE-ECCCCEEEEECcccceeEEeecCcCCCCcEEEEECCCcEEEEeCCEEEEEC
Confidence            34689999999999999998 88999999876665555555433 345567777544222222234444444

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>KOG2066|consensus

Probab=98.25  E-value=7.7e-05  Score=69.91  Aligned_cols=111  Identities=14%  Similarity=0.221  Sum_probs=79.3

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccC-----CcEEEEec-CCeEEEEeccccCcCCCccccc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPN-----GRYLASGS-NNTVKIWDFRQLDAKRPQVNNQ   77 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~-----g~~las~~-d~~i~vwd~~~~~~~~~~~~~~   77 (488)
                      +|.++|+++.||+|.|-.+-+.+.. ..+. -..++.+++++|+     .+.+++|+ .| +.++.-+=......+ .+.
T Consensus        82 ~Gey~asCS~DGkv~I~sl~~~~~~-~~~d-f~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v-~l~  157 (846)
T KOG2066|consen   82 EGEYVASCSDDGKVVIGSLFTDDEI-TQYD-FKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSV-VLS  157 (846)
T ss_pred             CCceEEEecCCCcEEEeeccCCccc-eeEe-cCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccce-eee
Confidence            6999999999999999998887744 2233 3347999999998     56788888 55 777654321112222 344


Q ss_pred             ccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecC
Q psy14511         78 CHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTD  124 (488)
Q Consensus        78 ~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~  124 (488)
                      .-.++|.++.|.  |. +++-..   |--++++|+.+++.+..+...
T Consensus       158 ~~eG~I~~i~W~--g~-lIAWan---d~Gv~vyd~~~~~~l~~i~~p  198 (846)
T KOG2066|consen  158 EGEGPIHSIKWR--GN-LIAWAN---DDGVKVYDTPTRQRLTNIPPP  198 (846)
T ss_pred             cCccceEEEEec--Cc-EEEEec---CCCcEEEeccccceeeccCCC
Confidence            567899999997  43 555555   778999999888876665544

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=98.25  E-value=0.00075  Score=59.37  Aligned_cols=289  Identities=11%  Similarity=0.125  Sum_probs=124.7

Q ss_pred             EEEccCCcEEEEec--C--CeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCee
Q psy14511         42 LKWSPNGRYLASGS--N--NTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKE  117 (488)
Q Consensus        42 l~~sp~g~~las~~--d--~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~  117 (488)
                      =+|.+||+.|+.++  |  ..+.+.|+++++..+ +.... . .......++|+++.++....   ...++-.|+.+.+.
T Consensus        41 ~~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~Q-LTdg~-g-~~~~g~~~s~~~~~~~Yv~~---~~~l~~vdL~T~e~  114 (386)
T PF14583_consen   41 NCFTDDGRKLLFASDFDGNRNLYLLDLATGEITQ-LTDGP-G-DNTFGGFLSPDDRALYYVKN---GRSLRRVDLDTLEE  114 (386)
T ss_dssp             --B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE----SS---B-TTT-EE-TTSSEEEEEET---TTEEEEEETTT--E
T ss_pred             CCcCCCCCEEEEEeccCCCcceEEEEcccCEEEE-CccCC-C-CCccceEEecCCCeEEEEEC---CCeEEEEECCcCcE
Confidence            46788998777665  4  577777888755332 22111 1 22334667788888877765   67888999988876


Q ss_pred             eeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccc
Q psy14511        118 KCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIIN  197 (488)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (488)
                      .........-.....+..... ...........                       .     ...+......        
T Consensus       115 ~~vy~~p~~~~g~gt~v~n~d-~t~~~g~e~~~-----------------------~-----d~~~l~~~~~--------  157 (386)
T PF14583_consen  115 RVVYEVPDDWKGYGTWVANSD-CTKLVGIEISR-----------------------E-----DWKPLTKWKG--------  157 (386)
T ss_dssp             EEEEE--TTEEEEEEEEE-TT-SSEEEEEEEEG-----------------------G-----G-----SHHH--------
T ss_pred             EEEEECCcccccccceeeCCC-ccEEEEEEEee-----------------------h-----hccCccccHH--------
Confidence            544444322221111111110 00000000000                       0     0000000000        


Q ss_pred             cceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCC---CC-cEEEEECCc
Q psy14511        198 DFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTC---TE-YIDLWHEQE  273 (488)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~---~~-~i~i~d~~~  273 (488)
                                -..++.+-....|...|+.+++...++.    ....+..+.|+|....+++-|-.   +. .-+||-+++
T Consensus       158 ----------f~e~~~a~p~~~i~~idl~tG~~~~v~~----~~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~  223 (386)
T PF14583_consen  158 ----------FREFYEARPHCRIFTIDLKTGERKVVFE----DTDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINT  223 (386)
T ss_dssp             ----------HHHHHHC---EEEEEEETTT--EEEEEE----ESS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEET
T ss_pred             ----------HHHHHhhCCCceEEEEECCCCceeEEEe----cCccccCcccCCCCCCEEEEeccCCcceeceEEEEEEc
Confidence                      0112222234567778899988777776    45678899999987766665222   21 125554432


Q ss_pred             -ceeeeeeccc-cccEEEEEe---cCCEEEEe-----ecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEE
Q psy14511        274 -ERLIQKLRTH-MHQVIAMCW---NGNLLSCG-----TIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASG  343 (488)
Q Consensus       274 -~~~~~~~~~~-~~~v~~~~~---~~~~l~~~-----~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~  343 (488)
                       +.....+..+ ...+..=.|   ||..+.--     +.+..|.-+|+.+++..  .+... .....+--++||++++-=
T Consensus       224 dg~~~~~v~~~~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~~~~--~~~~~-p~~~H~~ss~Dg~L~vGD  300 (386)
T PF14583_consen  224 DGSNVKKVHRRMEGESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDTGERR--RLMEM-PWCSHFMSSPDGKLFVGD  300 (386)
T ss_dssp             TS---EESS---TTEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT--EE--EEEEE--SEEEEEE-TTSSEEEEE
T ss_pred             CCCcceeeecCCCCcccccccccCCCCEEEEEeecCCCCceEEEeeCCCCCCce--EEEeC-CceeeeEEcCCCCEEEec
Confidence             2333333222 223333333   66554432     22345666777765421  11111 124456667899888643


Q ss_pred             e-cC----------------eEEEEECCCCCCCccc---------------ceeeeeecCCCCEEEEEccCCCCeEEEEe
Q psy14511        344 S-NN----------------TVKIWDFRQLDAKRPL---------------GLIVPKLKREGRELVTSHGKQDCSLKMWE  391 (488)
Q Consensus       344 ~-d~----------------~i~iwd~~~~~~~~~~---------------~~~~~~~~~~~~~l~~~~g~~~~~i~i~d  391 (488)
                      + |.                -|+++++..+......               ......|+|||++++..+ ...|...||=
T Consensus       301 G~d~p~~v~~~~~~~~~~~p~i~~~~~~~~~~~~l~~h~~sw~v~~~~~q~~hPhp~FSPDgk~VlF~S-d~~G~~~vY~  379 (386)
T PF14583_consen  301 GGDAPVDVADAGGYKIENDPWIYLFDVEAGRFRKLARHDTSWKVLDGDRQVTHPHPSFSPDGKWVLFRS-DMEGPPAVYL  379 (386)
T ss_dssp             E-------------------EEEEEETTTTEEEEEEE-------BTTBSSTT----EE-TTSSEEEEEE--TTSS-EEEE
T ss_pred             CCCCCccccccccceecCCcEEEEeccccCceeeeeeccCcceeecCCCccCCCCCccCCCCCEEEEEC-CCCCCccEEE
Confidence            2 31                4566777654321110               111239999999999873 4566555553

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=98.20  E-value=0.0033  Score=54.86  Aligned_cols=232  Identities=12%  Similarity=0.073  Sum_probs=128.3

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCccc--------
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVN--------   75 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~--------   75 (488)
                      .++.|+.|+.+| +.+++........+.  .+...|..+...|+-+.|+.-+|+.+.++++...........        
T Consensus         6 ~~~~L~vGt~~G-l~~~~~~~~~~~~~i--~~~~~I~ql~vl~~~~~llvLsd~~l~~~~L~~l~~~~~~~~~~~~~~~~   82 (275)
T PF00780_consen    6 WGDRLLVGTEDG-LYVYDLSDPSKPTRI--LKLSSITQLSVLPELNLLLVLSDGQLYVYDLDSLEPVSTSAPLAFPKSRS   82 (275)
T ss_pred             CCCEEEEEECCC-EEEEEecCCccceeE--eecceEEEEEEecccCEEEEEcCCccEEEEchhhcccccccccccccccc
Confidence            577888999888 899998333322222  233349999999999999988999999999976443321100        


Q ss_pred             ---ccccccceeEEE--EecCCCeEEeeeCCcccceEEEEecCCCe-----eeeeeecCCCccccccccccccccceeEE
Q psy14511         76 ---NQCHLSAVKAIA--WCPWEPTLLATGGGICDQTVRLWNSMNGK-----EKCHVKTDSQQANDETISYREQKKRRHLS  145 (488)
Q Consensus        76 ---~~~h~~~v~~l~--~~~~~~~l~~~~~~~~d~~i~vwd~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (488)
                         .......+...+  =...+...+++..   .++|.+|.+....     ..+++...                     
T Consensus        83 ~~~~~~~~~~v~~f~~~~~~~~~~~L~va~---kk~i~i~~~~~~~~~f~~~~ke~~lp---------------------  138 (275)
T PF00780_consen   83 LPTKLPETKGVSFFAVNGGHEGSRRLCVAV---KKKILIYEWNDPRNSFSKLLKEISLP---------------------  138 (275)
T ss_pred             ccccccccCCeeEEeeccccccceEEEEEE---CCEEEEEEEECCcccccceeEEEEcC---------------------
Confidence               011223344433  1123334455554   6689888876531     11111111                     


Q ss_pred             EEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEEC
Q psy14511        146 FLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNT  225 (488)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~  225 (488)
                                                                           ..+..+.|.++ .++.+......+.|+
T Consensus       139 -----------------------------------------------------~~~~~i~~~~~-~i~v~~~~~f~~idl  164 (275)
T PF00780_consen  139 -----------------------------------------------------DPPSSIAFLGN-KICVGTSKGFYLIDL  164 (275)
T ss_pred             -----------------------------------------------------CCcEEEEEeCC-EEEEEeCCceEEEec
Confidence                                                                 11222444434 444444666888999


Q ss_pred             CCCceEEEEecCCC---------CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeee--eeccccccEEEEEecC
Q psy14511        226 KTNKTQLLVEYPTY---------DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQ--KLRTHMHQVIAMCWNG  294 (488)
Q Consensus       226 ~~~~~~~~~~~~~~---------~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~--~~~~~~~~v~~~~~~~  294 (488)
                      .++...........         ...++..+... ++.+|++.   +..-...|. .|+..+  .++ -.....++.+..
T Consensus       165 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~e~Ll~~---~~~g~fv~~-~G~~~r~~~i~-W~~~p~~~~~~~  238 (275)
T PF00780_consen  165 NTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQLS-DNEFLLCY---DNIGVFVNK-NGEPSRKSTIQ-WSSAPQSVAYSS  238 (275)
T ss_pred             CCCCceEEeCccCCcchhhhcccCCCceEEEEeC-CceEEEEe---cceEEEEcC-CCCcCcccEEE-cCCchhEEEEEC
Confidence            98777666543220         11233334443 34455543   222223343 333322  222 233556677777


Q ss_pred             CEEEEeecCCeEEEEECcCCCccceeeecC
Q psy14511        295 NLLSCGTIGGNILHYDVRTHSDYPTAITRE  324 (488)
Q Consensus       295 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~  324 (488)
                      .++++...+ .|.+|++.++ ..++.+...
T Consensus       239 pyli~~~~~-~iEV~~~~~~-~lvQ~i~~~  266 (275)
T PF00780_consen  239 PYLIAFSSN-SIEVRSLETG-ELVQTIPLP  266 (275)
T ss_pred             CEEEEECCC-EEEEEECcCC-cEEEEEECC
Confidence            777776664 4999999987 355555443

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>KOG1008|consensus

Probab=98.19  E-value=7.2e-07  Score=80.72  Aligned_cols=106  Identities=23%  Similarity=0.371  Sum_probs=76.2

Q ss_pred             CceEEEeecCCeEEEEEcccCccc-ceeecccCceEEEEEEcc-CCcEEEEec-----CCeEEEEecccc--CcCCCccc
Q psy14511          5 GNLLSCGTIGGNILHYDVRTHSDY-PTAITREGDVVCGLKWSP-NGRYLASGS-----NNTVKIWDFRQL--DAKRPQVN   75 (488)
Q Consensus         5 g~~la~g~~dg~i~iwd~~~~~~~-~~~~~~h~~~V~~l~~sp-~g~~las~~-----d~~i~vwd~~~~--~~~~~~~~   75 (488)
                      .-.+++|..+|.|.+-.+.....- ..+..+|..+.++++|++ |.+.||.|-     |..+.|||+.++  ...... .
T Consensus        70 ~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ltvPke~~-~  148 (783)
T KOG1008|consen   70 RCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLTVPKESP-L  148 (783)
T ss_pred             hhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccceecccccCCCcccc-c
Confidence            357889999999999988765433 456678999999999999 778888884     689999999875  111111 1


Q ss_pred             ccc-cccceeEEEEecCCCeEEeeeCCcccceEEEEecCC
Q psy14511         76 NQC-HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMN  114 (488)
Q Consensus        76 ~~~-h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~  114 (488)
                      +.+ -.....+++|..+.+.+++...   .+.+.++|++.
T Consensus       149 fs~~~l~gqns~cwlrd~klvlaGm~---sr~~~ifdlRq  185 (783)
T KOG1008|consen  149 FSSSTLDGQNSVCWLRDTKLVLAGMT---SRSVHIFDLRQ  185 (783)
T ss_pred             cccccccCccccccccCcchhhcccc---cchhhhhhhhh
Confidence            222 3345668899977765555444   77899999863

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=98.19  E-value=0.0025  Score=55.07  Aligned_cols=254  Identities=10%  Similarity=0.112  Sum_probs=143.3

Q ss_pred             CeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEe---------CCCCcEEEEECCcceeeeeeccccc---
Q psy14511        218 TSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTN---------TCTEYIDLWHEQEERLIQKLRTHMH---  285 (488)
Q Consensus       218 ~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~---------~~~~~i~i~d~~~~~~~~~~~~~~~---  285 (488)
                      ++++++|.++++.+-.+..     +..-.+..+|+++.+++..         ...-.|.+||..+-.....+.-...   
T Consensus        17 ~rv~viD~d~~k~lGmi~~-----g~~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~   91 (342)
T PF06433_consen   17 SRVYVIDADSGKLLGMIDT-----GFLGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRA   91 (342)
T ss_dssp             EEEEEEETTTTEEEEEEEE-----ESSEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B-
T ss_pred             ceEEEEECCCCcEEEEeec-----ccCCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchh
Confidence            5899999999987766653     2344577899999988752         2344799999998766665432221   


Q ss_pred             ------cEEEEEecCCEEEEe--ecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCC
Q psy14511        286 ------QVIAMCWNGNLLSCG--TIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLD  357 (488)
Q Consensus       286 ------~v~~~~~~~~~l~~~--~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~  357 (488)
                            ....++-|+++++..  +-.-.|.+.|+...+ ....+.-..  ...+--+++..+.+.|+||.+.-..+....
T Consensus        92 ~~~~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~k-vv~ei~~PG--C~~iyP~~~~~F~~lC~DGsl~~v~Ld~~G  168 (342)
T PF06433_consen   92 QVVPYKNMFALSADGKFLYVQNFTPATSVTVVDLAAKK-VVGEIDTPG--CWLIYPSGNRGFSMLCGDGSLLTVTLDADG  168 (342)
T ss_dssp             -BS--GGGEEE-TTSSEEEEEEESSSEEEEEEETTTTE-EEEEEEGTS--EEEEEEEETTEEEEEETTSCEEEEEETSTS
T ss_pred             eecccccceEEccCCcEEEEEccCCCCeEEEEECCCCc-eeeeecCCC--EEEEEecCCCceEEEecCCceEEEEECCCC
Confidence                  223344466666554  334567777777643 333333222  222222334456667778888888887432


Q ss_pred             CCcccc-ee----------eeeecCCCCEEEEEccCCCCeEEEEeCCCcce--eEEEeec----------cccEEEEEEc
Q psy14511        358 AKRPLG-LI----------VPKLKREGRELVTSHGKQDCSLKMWEYPRLHL--IEELKIH----------QERILSAVLS  414 (488)
Q Consensus       358 ~~~~~~-~~----------~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~--~~~~~~~----------~~~v~~~~~s  414 (488)
                      ...... ..          ...++..+..++.  -+.+|.|+-.|+.....  ...+.--          .+.-.-++++
T Consensus       169 k~~~~~t~~F~~~~dp~f~~~~~~~~~~~~~F--~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~  246 (342)
T PF06433_consen  169 KEAQKSTKVFDPDDDPLFEHPAYSRDGGRLYF--VSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYH  246 (342)
T ss_dssp             SEEEEEEEESSTTTS-B-S--EEETTTTEEEE--EBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEE
T ss_pred             CEeEeeccccCCCCcccccccceECCCCeEEE--EecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeec
Confidence            222111 11          1134444433333  26788888888865432  2222110          1223357787


Q ss_pred             CCCCEEEEEe---CCC-------cEEEEecCCCCccccccccCCcceEEeecCCCceEEEEeeecccccceeeEEEEeec
Q psy14511        415 PDQTCVAAAS---ADE-------TISIWNCFPRDKKRKARQVGSGSSLEFAILKQPVSLTALLRSRAVEKQQHAIAYTVF  484 (488)
Q Consensus       415 ~~~~~l~t~~---~dg-------~v~iw~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  484 (488)
                      +..+.|...-   .+|       .|-++|+.+++++.......++.++..+.+.+++.+..     ...+..+.+....+
T Consensus       247 ~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l~~~~~Si~Vsqd~~P~L~~~-----~~~~~~l~v~D~~t  321 (342)
T PF06433_consen  247 AASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPLEHPIDSIAVSQDDKPLLYAL-----SAGDGTLDVYDAAT  321 (342)
T ss_dssp             TTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEEEEEESEEEEESSSS-EEEEE-----ETTTTEEEEEETTT
T ss_pred             cccCeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEEeCCCccceEEEccCCCcEEEEE-----cCCCCeEEEEeCcC
Confidence            7665554422   222       47788888988887777677888999999999885432     12334455555555


Q ss_pred             cc
Q psy14511        485 GE  486 (488)
Q Consensus       485 g~  486 (488)
                      |+
T Consensus       322 Gk  323 (342)
T PF06433_consen  322 GK  323 (342)
T ss_dssp             --
T ss_pred             Cc
Confidence            54

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=98.17  E-value=0.0029  Score=53.06  Aligned_cols=195  Identities=10%  Similarity=0.131  Sum_probs=106.6

Q ss_pred             EEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccc-cccEEEEEe--cCCEEEEeecCCeEEEE
Q psy14511        233 LVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTH-MHQVIAMCW--NGNLLSCGTIGGNILHY  309 (488)
Q Consensus       233 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~-~~~v~~~~~--~~~~l~~~~~dg~i~i~  309 (488)
                      ...+++ ....+..++|+|+.+.|++.....+.|..++.+ ++.++.+.-. .+..-.+++  ++.++++--.++.+.++
T Consensus        14 ~~~l~g-~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~-G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~   91 (248)
T PF06977_consen   14 AKPLPG-ILDELSGLTYNPDTGTLFAVQDEPGEIYELSLD-GKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIF   91 (248)
T ss_dssp             EEE-TT---S-EEEEEEETTTTEEEEEETTTTEEEEEETT---EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEE
T ss_pred             eeECCC-ccCCccccEEcCCCCeEEEEECCCCEEEEEcCC-CCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEE
Confidence            445555 556799999999877666654888899888874 6777776533 355677777  45555555568999999


Q ss_pred             ECcCCCccc-----eee-----ecCCccEEEEEEccCCcEEEEEec-CeEEEEECCCCCCCcccc---------------
Q psy14511        310 DVRTHSDYP-----TAI-----TREGDVVCGLKWSPNGRYLASGSN-NTVKIWDFRQLDAKRPLG---------------  363 (488)
Q Consensus       310 d~~~~~~~~-----~~~-----~~~~~~i~~~~~s~~~~~l~~~~d-~~i~iwd~~~~~~~~~~~---------------  363 (488)
                      ++.......     ..+     ..++..+-.++|+|.++.|..+.+ .-..+|.+........+.               
T Consensus        92 ~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (248)
T PF06977_consen   92 TIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVR  171 (248)
T ss_dssp             EE----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS
T ss_pred             EEeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceec
Confidence            884432111     111     134566899999998777777764 555566654311000100               


Q ss_pred             ee-eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeecc---------ccEEEEEEcCCCCEEEEEeCCCcEEEE
Q psy14511        364 LI-VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQ---------ERILSAVLSPDQTCVAAASADETISIW  432 (488)
Q Consensus       364 ~~-~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~---------~~v~~~~~s~~~~~l~t~~~dg~v~iw  432 (488)
                      .. ...+.|....+++. ......|..+| .+|+++..+.-..         ...-.|+|.++|++.++. .-+..+++
T Consensus       172 d~S~l~~~p~t~~lliL-S~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIvs-EpNlfy~f  247 (248)
T PF06977_consen  172 DLSGLSYDPRTGHLLIL-SDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIVS-EPNLFYRF  247 (248)
T ss_dssp             ---EEEEETTTTEEEEE-ETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEEE-TTTEEEEE
T ss_pred             cccceEEcCCCCeEEEE-ECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEEEc-CCceEEEe
Confidence            00 11667765544444 57788899999 6677666543222         246789999998655544 55544443

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>KOG3617|consensus

Probab=98.16  E-value=0.00012  Score=69.10  Aligned_cols=92  Identities=20%  Similarity=0.259  Sum_probs=73.2

Q ss_pred             CCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--c
Q psy14511        216 LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--N  293 (488)
Q Consensus       216 ~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~  293 (488)
                      ..|.|.||- ++|++..-.+.+    -.+++++|+|..-.|+.+ -.-|.+.+|...+.+.-.....|..++..+.|  +
T Consensus        39 r~GSVtIfa-dtGEPqr~Vt~P----~hatSLCWHpe~~vLa~g-we~g~~~v~~~~~~e~htv~~th~a~i~~l~wS~~  112 (1416)
T KOG3617|consen   39 RGGSVTIFA-DTGEPQRDVTYP----VHATSLCWHPEEFVLAQG-WEMGVSDVQKTNTTETHTVVETHPAPIQGLDWSHD  112 (1416)
T ss_pred             CCceEEEEe-cCCCCCcccccc----eehhhhccChHHHHHhhc-cccceeEEEecCCceeeeeccCCCCCceeEEecCC
Confidence            567888874 455554444432    346779999998777777 88999999998887766667789999999999  7


Q ss_pred             CCEEEEeecCCeEEEEECcC
Q psy14511        294 GNLLSCGTIGGNILHYDVRT  313 (488)
Q Consensus       294 ~~~l~~~~~dg~i~i~d~~~  313 (488)
                      |..++++..-|.+.+|....
T Consensus       113 G~~l~t~d~~g~v~lwr~d~  132 (1416)
T KOG3617|consen  113 GTVLMTLDNPGSVHLWRYDV  132 (1416)
T ss_pred             CCeEEEcCCCceeEEEEeee
Confidence            99999999999999998763

>KOG2066|consensus

Probab=98.12  E-value=0.00022  Score=67.03  Aligned_cols=173  Identities=11%  Similarity=0.091  Sum_probs=118.1

Q ss_pred             eeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeee
Q psy14511        201 TSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKL  280 (488)
Q Consensus       201 ~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~  280 (488)
                      ++++.++...++.++..|.|++++..... ...+.    |...      ..+|.+++++ +.||+|.|-.+.+.+....+
T Consensus        42 is~~av~~~~~~~GtH~g~v~~~~~~~~~-~~~~~----~s~~------~~~Gey~asC-S~DGkv~I~sl~~~~~~~~~  109 (846)
T KOG2066|consen   42 ISCCAVHDKFFALGTHRGAVYLTTCQGNP-KTNFD----HSSS------ILEGEYVASC-SDDGKVVIGSLFTDDEITQY  109 (846)
T ss_pred             HHHHHhhcceeeeccccceEEEEecCCcc-ccccc----cccc------ccCCceEEEe-cCCCcEEEeeccCCccceeE
Confidence            44455566677778899999999876543 11111    2222      6689999999 99999999998887766665


Q ss_pred             ccccccEEEEEec-------CCEEEEeecCCeEEEEECcCCCc-cceeeecCCccEEEEEEccCCcEEEEEecCeEEEEE
Q psy14511        281 RTHMHQVIAMCWN-------GNLLSCGTIGGNILHYDVRTHSD-YPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWD  352 (488)
Q Consensus       281 ~~~~~~v~~~~~~-------~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd  352 (488)
                      . ...++.+++++       .+.+++|+..| +.++.-+--+. ....+....++|.++.|.  |.++|-++|-.+++||
T Consensus       110 d-f~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~eG~I~~i~W~--g~lIAWand~Gv~vyd  185 (846)
T KOG2066|consen  110 D-FKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEGEGPIHSIKWR--GNLIAWANDDGVKVYD  185 (846)
T ss_pred             e-cCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecCccceEEEEec--CcEEEEecCCCcEEEe
Confidence            3 45677777773       46889999988 77776432211 122466677899999995  8899999998899999


Q ss_pred             CCCCCCCcccceee-----------eeecCCCCEEEEEccCCCCeEEEEeCC
Q psy14511        353 FRQLDAKRPLGLIV-----------PKLKREGRELVTSHGKQDCSLKMWEYP  393 (488)
Q Consensus       353 ~~~~~~~~~~~~~~-----------~~~~~~~~~l~~~~g~~~~~i~i~d~~  393 (488)
                      .........+....           ..|.++.+.++    +...+|+|..++
T Consensus       186 ~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~~LVI----GW~d~v~i~~I~  233 (846)
T KOG2066|consen  186 TPTRQRLTNIPPPSQSVRPELFPPHLHWQDEDRLVI----GWGDSVKICSIK  233 (846)
T ss_pred             ccccceeeccCCCCCCCCcccCCCceEecCCCeEEE----ecCCeEEEEEEe
Confidence            98765433332221           15555555444    345568887776

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=98.09  E-value=0.0024  Score=58.82  Aligned_cols=178  Identities=15%  Similarity=0.193  Sum_probs=81.1

Q ss_pred             EEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCccceeeecC
Q psy14511        245 SCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITRE  324 (488)
Q Consensus       245 ~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~  324 (488)
                      ...+|.+.+ .+++- .....|.++.--..+....++.. ..+..+-. |.+|...+.+ .|.+||..+. ..+..+...
T Consensus        72 ~~~vw~~~n-~yAv~-~~~~~I~I~kn~~~~~~k~i~~~-~~~~~If~-G~LL~~~~~~-~i~~yDw~~~-~~i~~i~v~  145 (443)
T PF04053_consen   72 LSFVWSSRN-RYAVL-ESSSTIKIYKNFKNEVVKSIKLP-FSVEKIFG-GNLLGVKSSD-FICFYDWETG-KLIRRIDVS  145 (443)
T ss_dssp             SEEEE-TSS-EEEEE--TTS-EEEEETTEE-TT-----S-S-EEEEE--SSSEEEEETT-EEEEE-TTT---EEEEESS-
T ss_pred             eEEEEecCc-cEEEE-ECCCeEEEEEcCccccceEEcCC-cccceEEc-CcEEEEECCC-CEEEEEhhHc-ceeeEEecC
Confidence            346677744 34444 45777777632222222233221 12333322 6666555444 7888888775 344444432


Q ss_pred             CccEEEEEEccCCcEEEEEecCeEEEEECCCC------C-----CCcccce---eee--eecCCCCEEEEEccCCCCeEE
Q psy14511        325 GDVVCGLKWSPNGRYLASGSNNTVKIWDFRQL------D-----AKRPLGL---IVP--KLKREGRELVTSHGKQDCSLK  388 (488)
Q Consensus       325 ~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~------~-----~~~~~~~---~~~--~~~~~~~~l~~~~g~~~~~i~  388 (488)
                        +|..+.|+++|+++|..++..+.|++....      +     ....+..   .+.  .|..+  .++.+  ... .++
T Consensus       146 --~vk~V~Ws~~g~~val~t~~~i~il~~~~~~~~~~~~~g~e~~f~~~~E~~~~IkSg~W~~d--~fiYt--T~~-~lk  218 (443)
T PF04053_consen  146 --AVKYVIWSDDGELVALVTKDSIYILKYNLEAVAAIPEEGVEDAFELIHEISERIKSGCWVED--CFIYT--TSN-HLK  218 (443)
T ss_dssp             --E-EEEEE-TTSSEEEEE-S-SEEEEEE-HHHHHHBTTTB-GGGEEEEEEE-S--SEEEEETT--EEEEE---TT-EEE
T ss_pred             --CCcEEEEECCCCEEEEEeCCeEEEEEecchhcccccccCchhceEEEEEecceeEEEEEEcC--EEEEE--cCC-eEE
Confidence              377888888888888888777777765432      0     0111111   111  44444  33332  112 444


Q ss_pred             EEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCC
Q psy14511        389 MWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRD  438 (488)
Q Consensus       389 i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~  438 (488)
                      -  +..|+ ..++..-..++.=+.+.|+.+.+.....|+.|..+.+....
T Consensus       219 Y--l~~Ge-~~~i~~ld~~~yllgy~~~~~~ly~~Dr~~~v~~~~ld~~~  265 (443)
T PF04053_consen  219 Y--LVNGE-TGIIAHLDKPLYLLGYLPKENRLYLIDRDGNVISYELDLSE  265 (443)
T ss_dssp             E--EETTE-EEEEEE-SS--EEEEEETTTTEEEEE-TT--EEEEE--HHH
T ss_pred             E--EEcCC-cceEEEcCCceEEEEEEccCCEEEEEECCCCEEEEEECHHH
Confidence            3  22232 23333335677788888888899999999999999887544

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=98.07  E-value=0.0049  Score=56.51  Aligned_cols=65  Identities=15%  Similarity=0.114  Sum_probs=55.5

Q ss_pred             eecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCC
Q psy14511        368 KLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFP  436 (488)
Q Consensus       368 ~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~  436 (488)
                      +++|+.+.++.  |+.||+|.+||...+.  ..+....-..+.++|+|+|..+++|+..|.+.+||+.-
T Consensus       266 a~sp~E~kLvl--GC~DgSiiLyD~~~~~--t~~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~AL  330 (545)
T PF11768_consen  266 ARSPSEDKLVL--GCEDGSIILYDTTRGV--TLLAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMAL  330 (545)
T ss_pred             ecCcccceEEE--EecCCeEEEEEcCCCe--eeeeeecccceEEEEcCCCcEEEEEcCCceEEEEEeec
Confidence            89999999999  8999999999987653  22333445678999999999999999999999999873

>KOG4649|consensus

Probab=98.06  E-value=0.0042  Score=50.63  Aligned_cols=117  Identities=13%  Similarity=0.001  Sum_probs=75.1

Q ss_pred             ceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCccccccccccee
Q psy14511          6 NLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVK   84 (488)
Q Consensus         6 ~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~   84 (488)
                      +++..|+..+.+.--|..++..+.+..-+-+  |.+-+.- -|++++.|. .+.+++.+++++.........    +.|.
T Consensus        24 T~v~igSHs~~~~avd~~sG~~~We~ilg~R--iE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~----~~vk   96 (354)
T KOG4649|consen   24 TLVVIGSHSGIVIAVDPQSGNLIWEAILGVR--IECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIWNFVIL----ETVK   96 (354)
T ss_pred             eEEEEecCCceEEEecCCCCcEEeehhhCce--eeeeeEE-ECCEEEEEEccCcEEEEEecchhheeeeeeh----hhhc
Confidence            5677888888888889888876544433332  3222222 477888887 999999999987543332221    2222


Q ss_pred             E-EEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCcccccc
Q psy14511         85 A-IAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDET  132 (488)
Q Consensus        85 ~-l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~  132 (488)
                      + ....+++. ++.+++.  |++....|..+..++...+..........
T Consensus        97 ~~a~~d~~~g-lIycgsh--d~~~yalD~~~~~cVykskcgG~~f~sP~  142 (354)
T KOG4649|consen   97 VRAQCDFDGG-LIYCGSH--DGNFYALDPKTYGCVYKSKCGGGTFVSPV  142 (354)
T ss_pred             cceEEcCCCc-eEEEecC--CCcEEEecccccceEEecccCCceeccce
Confidence            1 22345664 5666663  99999999999998888776644333333

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=98.06  E-value=0.0021  Score=59.07  Aligned_cols=189  Identities=12%  Similarity=0.111  Sum_probs=98.6

Q ss_pred             cEEEEECCcceeeeeeccccccEEEEEe-cCCEEEEeecCCeEEEEECcCCC-----ccceeeecCCccEEEEEEccCCc
Q psy14511        265 YIDLWHEQEERLIQKLRTHMHQVIAMCW-NGNLLSCGTIGGNILHYDVRTHS-----DYPTAITREGDVVCGLKWSPNGR  338 (488)
Q Consensus       265 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~-----~~~~~~~~~~~~i~~~~~s~~~~  338 (488)
                      .|++|+... +.+..+.-..+.+.++.| +...|++-..||.+++||+....     .......-....+....+..+|-
T Consensus        62 ~I~iys~sG-~ll~~i~w~~~~iv~~~wt~~e~LvvV~~dG~v~vy~~~G~~~fsl~~~i~~~~v~e~~i~~~~~~~~Gi  140 (410)
T PF04841_consen   62 SIQIYSSSG-KLLSSIPWDSGRIVGMGWTDDEELVVVQSDGTVRVYDLFGEFQFSLGEEIEEEKVLECRIFAIWFYKNGI  140 (410)
T ss_pred             EEEEECCCC-CEeEEEEECCCCEEEEEECCCCeEEEEEcCCEEEEEeCCCceeechhhhccccCcccccccccccCCCCE
Confidence            488887654 555555444489999999 66788888999999999986322     00100111111122223333553


Q ss_pred             EEEEEecCeEEEEECCCCC-CCcccceee---e------------eecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEe
Q psy14511        339 YLASGSNNTVKIWDFRQLD-AKRPLGLIV---P------------KLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELK  402 (488)
Q Consensus       339 ~l~~~~d~~i~iwd~~~~~-~~~~~~~~~---~------------~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~  402 (488)
                      .+.+ .++.+.+.+-.... ..+.+....   .            .++.+....+.  ...++.+.+.+....+.   +.
T Consensus       141 vvLt-~~~~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~i~--~~~g~~i~~i~~~~~~~---i~  214 (410)
T PF04841_consen  141 VVLT-GNNRFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVEIL--LANGETIYIIDENSFKQ---ID  214 (410)
T ss_pred             EEEC-CCCeEEEEeCccccchhhccccCCCcccccccccccccceEeecCcceEEE--EecCCEEEEEEcccccc---cc
Confidence            3333 23333333221111 101111110   0            12222222222  12223333222221111   11


Q ss_pred             eccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcccccc--ccCCcceEEeecCCCce
Q psy14511        403 IHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKAR--QVGSGSSLEFAILKQPV  461 (488)
Q Consensus       403 ~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~~~--~~~~v~~~~~s~~~~~~  461 (488)
                       ..+++..++.||+++++|.-..+|.+.+.+..-.+......  .......+.|.-+...+
T Consensus       215 -~~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~dav~  274 (410)
T PF04841_consen  215 -SDGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGNDAVV  274 (410)
T ss_pred             -CCCCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecCcCCCCcEEEEECCCcEE
Confidence             23579999999999999999999999998876554443322  33566788888765443

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>KOG4649|consensus

Probab=98.05  E-value=0.0044  Score=50.55  Aligned_cols=98  Identities=7%  Similarity=-0.063  Sum_probs=64.7

Q ss_pred             CCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceE-EEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecccccc
Q psy14511        208 YHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYIS-CVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQ  286 (488)
Q Consensus       208 ~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~  286 (488)
                      ++.++.++..|.+++.+..+|.....+...+    .|. .....+++..+..+ +.|+..+..|.++..++...+.....
T Consensus        63 gdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~----~vk~~a~~d~~~glIycg-shd~~~yalD~~~~~cVykskcgG~~  137 (354)
T KOG4649|consen   63 GDFVVLGCYSGGLYFLCVKTGSQIWNFVILE----TVKVRAQCDFDGGLIYCG-SHDGNFYALDPKTYGCVYKSKCGGGT  137 (354)
T ss_pred             CCEEEEEEccCcEEEEEecchhheeeeeehh----hhccceEEcCCCceEEEe-cCCCcEEEecccccceEEecccCCce
Confidence            3557888899999999999997666655432    222 23456788888888 99999999999998888876543332


Q ss_pred             EE--EEEecCCEEEEeecCCeEEEEE
Q psy14511        287 VI--AMCWNGNLLSCGTIGGNILHYD  310 (488)
Q Consensus       287 v~--~~~~~~~~l~~~~~dg~i~i~d  310 (488)
                      ..  +++.-...|..+...|.+.--.
T Consensus       138 f~sP~i~~g~~sly~a~t~G~vlavt  163 (354)
T KOG4649|consen  138 FVSPVIAPGDGSLYAAITAGAVLAVT  163 (354)
T ss_pred             eccceecCCCceEEEEeccceEEEEc
Confidence            22  2333233444444445444333

>KOG2114|consensus

Probab=98.05  E-value=0.0013  Score=62.60  Aligned_cols=74  Identities=14%  Similarity=0.226  Sum_probs=51.6

Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCccee-eeeeccccccEEEEEe-cCCE-EEEeecCCeEEEEECcCCC
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERL-IQKLRTHMHQVIAMCW-NGNL-LSCGTIGGNILHYDVRTHS  315 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~-~~~~~~~~~~v~~~~~-~~~~-l~~~~~dg~i~i~d~~~~~  315 (488)
                      ...+|+.+++..++..++.. ..-..|.+|.+....+ ...+..|...+.|.++ ++.. +++++ +.-+.+|+....+
T Consensus       170 ~~~pITgL~~~~d~~s~lFv-~Tt~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca~-~e~l~fY~sd~~~  246 (933)
T KOG2114|consen  170 GKEPITGLALRSDGKSVLFV-ATTEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICAG-SEFLYFYDSDGRG  246 (933)
T ss_pred             CCCCceeeEEecCCceeEEE-EecceeEEEEecCCCcceeeeccCCccceeeecCCCCccEEEec-CceEEEEcCCCcc
Confidence            56789999999998873333 2456788999885442 4447778888899888 4444 44443 4569999988654

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=98.05  E-value=0.011  Score=55.11  Aligned_cols=60  Identities=17%  Similarity=0.216  Sum_probs=40.2

Q ss_pred             ceEEEEEEccCCcEEEEec--C----CeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeC
Q psy14511         37 DVVCGLKWSPNGRYLASGS--N----NTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGG  100 (488)
Q Consensus        37 ~~V~~l~~sp~g~~las~~--d----~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~  100 (488)
                      ..+...++||||++||.+-  .    ..+++.|+++++.....  +.  ......+.|.+|++.++.+..
T Consensus       124 ~~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~--i~--~~~~~~~~W~~d~~~~~y~~~  189 (414)
T PF02897_consen  124 VSLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDG--IE--NPKFSSVSWSDDGKGFFYTRF  189 (414)
T ss_dssp             EEEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEE--EE--EEESEEEEECTTSSEEEEEEC
T ss_pred             EEeeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCc--cc--ccccceEEEeCCCCEEEEEEe
Confidence            3455789999999998762  2    57999999986432211  11  111223999999988887765

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>KOG1008|consensus

Probab=98.04  E-value=3.9e-06  Score=76.15  Aligned_cols=205  Identities=15%  Similarity=0.207  Sum_probs=126.2

Q ss_pred             CceEEEEEEccCC--cEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCC--cccceEEEE
Q psy14511         36 GDVVCGLKWSPNG--RYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGG--ICDQTVRLW  110 (488)
Q Consensus        36 ~~~V~~l~~sp~g--~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~--~~d~~i~vw  110 (488)
                      ...+.|+++.-+.  .+++.|. +|.|.+-.+...... ......+|..+.++++|++-+...+++|-+  ..|..+.||
T Consensus        56 tqy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdS-s~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iw  134 (783)
T KOG1008|consen   56 TQYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDS-SAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIW  134 (783)
T ss_pred             CCCceeehhhcCCchhhhhhccccCceEEeecCCcccc-cceecccccccccccccccccHHHHHhhhhhhcccCCccce
Confidence            4467888887644  4777777 899999887643222 122346688899999999865566666641  125578899


Q ss_pred             ecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceee
Q psy14511        111 NSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERIL  190 (488)
Q Consensus       111 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (488)
                      |+.++-...   ..                                                                  
T Consensus       135 di~s~ltvP---ke------------------------------------------------------------------  145 (783)
T KOG1008|consen  135 DINSLLTVP---KE------------------------------------------------------------------  145 (783)
T ss_pred             ecccccCCC---cc------------------------------------------------------------------
Confidence            987652100   00                                                                  


Q ss_pred             cCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEE
Q psy14511        191 EAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWH  270 (488)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d  270 (488)
                                        .             |.+.++           ......+++|..+.+.+++| .....+.++|
T Consensus       146 ------------------~-------------~~fs~~-----------~l~gqns~cwlrd~klvlaG-m~sr~~~ifd  182 (783)
T KOG1008|consen  146 ------------------S-------------PLFSSS-----------TLDGQNSVCWLRDTKLVLAG-MTSRSVHIFD  182 (783)
T ss_pred             ------------------c-------------cccccc-----------cccCccccccccCcchhhcc-cccchhhhhh
Confidence                              0             000000           11123378888777788877 8888999999


Q ss_pred             CCcc-eeeeeeccccccEEEEEe---cCCEEEEeecCCeEEEEE-CcCCCccceeeecCCc----cEEEEEEccCCc-EE
Q psy14511        271 EQEE-RLIQKLRTHMHQVIAMCW---NGNLLSCGTIGGNILHYD-VRTHSDYPTAITREGD----VVCGLKWSPNGR-YL  340 (488)
Q Consensus       271 ~~~~-~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~i~d-~~~~~~~~~~~~~~~~----~i~~~~~s~~~~-~l  340 (488)
                      ++.. .....+  ....+..+..   .++++++-. ||.|.+|| .++-+.+...+.....    .+..++|.|... .+
T Consensus       183 lRqs~~~~~sv--nTk~vqG~tVdp~~~nY~cs~~-dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtgll  259 (783)
T KOG1008|consen  183 LRQSLDSVSSV--NTKYVQGITVDPFSPNYFCSNS-DGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLL  259 (783)
T ss_pred             hhhhhhhhhhh--hhhhcccceecCCCCCceeccc-cCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchh
Confidence            8742 111112  1222333333   567776655 99999999 5444444444433333    488999999653 55


Q ss_pred             EEEe-c-CeEEEEECCCC
Q psy14511        341 ASGS-N-NTVKIWDFRQL  356 (488)
Q Consensus       341 ~~~~-d-~~i~iwd~~~~  356 (488)
                      ++.. | ++|+++|+...
T Consensus       260 a~l~RdS~tIrlydi~~v  277 (783)
T KOG1008|consen  260 AVLSRDSITIRLYDICVV  277 (783)
T ss_pred             hhhccCcceEEEeccccc
Confidence            6666 6 99999998743

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=98.03  E-value=0.009  Score=54.29  Aligned_cols=201  Identities=11%  Similarity=0.082  Sum_probs=104.5

Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeee--cc------ccccEEEEEe-------cC---CEEEEee
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKL--RT------HMHQVIAMCW-------NG---NLLSCGT  301 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~--~~------~~~~v~~~~~-------~~---~~l~~~~  301 (488)
                      ..++|++++.+.-| +++++ +.+|.+.+.|++....+..-  ..      ....++++.|       |+   -.+++|+
T Consensus        85 ~~g~vtal~~S~iG-Fvaig-y~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vGT  162 (395)
T PF08596_consen   85 KQGPVTALKNSDIG-FVAIG-YESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVGT  162 (395)
T ss_dssp             -S-SEEEEEE-BTS-EEEEE-ETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEEE
T ss_pred             cCCcEeEEecCCCc-EEEEE-ecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEEe
Confidence            57899999998555 88888 99999999999987776552  11      2335677777       22   4788899


Q ss_pred             cCCeEEEEECcCCCc--cceee----ecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccceeeeeecC---C
Q psy14511        302 IGGNILHYDVRTHSD--YPTAI----TREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKR---E  372 (488)
Q Consensus       302 ~dg~i~i~d~~~~~~--~~~~~----~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~---~  372 (488)
                      ..|.+.+|.+.-...  ....+    ..+.++|                 ..|..+|.++++............++   .
T Consensus       163 n~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i-----------------~~I~~i~~~~G~~a~At~~~~~~l~~g~~i  225 (395)
T PF08596_consen  163 NSGNVLTFKILPSSNGRFSVQFAGATTNHDSPI-----------------LSIIPINADTGESALATISAMQGLSKGISI  225 (395)
T ss_dssp             TTSEEEEEEEEE-GGG-EEEEEEEEE--SS---------------------EEEEEETTT--B-B-BHHHHHGGGGT---
T ss_pred             CCCCEEEEEEecCCCCceEEEEeeccccCCCce-----------------EEEEEEECCCCCcccCchhHhhccccCCCc
Confidence            999999998752111  00000    0111222                 22333444433221111111111111   1


Q ss_pred             CCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEc-----CCCCEEEEEeCCCcEEEEecCCCCcccccc---
Q psy14511        373 GRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLS-----PDQTCVAAASADETISIWNCFPRDKKRKAR---  444 (488)
Q Consensus       373 ~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s-----~~~~~l~t~~~dg~v~iw~~~~~~~~~~~~---  444 (488)
                      ..++++   ..+..++++...+.+.........-....+.+-     ..+..|++-..+|.|+++.+..-+.+....   
T Consensus       226 ~g~vVv---vSe~~irv~~~~~~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~~  302 (395)
T PF08596_consen  226 PGYVVV---VSESDIRVFKPPKSKGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLPP  302 (395)
T ss_dssp             -EEEEE---E-SSEEEEE-TT---EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-SS
T ss_pred             CcEEEE---EcccceEEEeCCCCcccceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhcccCCC
Confidence            123333   237789999998877665544222233344452     356788999999999999999877663322   


Q ss_pred             --ccCCcceEEeecCCCceE
Q psy14511        445 --QVGSGSSLEFAILKQPVS  462 (488)
Q Consensus       445 --~~~~v~~~~~s~~~~~~~  462 (488)
                        .........++++|..+.
T Consensus       303 ~~d~~~~~~ssis~~Gdi~~  322 (395)
T PF08596_consen  303 PLDSRRLSSSSISRNGDIFY  322 (395)
T ss_dssp             ---HHHHTT-EE-TTS-EEE
T ss_pred             ccccccccccEECCCCCEEE
Confidence              223355677788888653

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=98.00  E-value=0.003  Score=57.87  Aligned_cols=90  Identities=18%  Similarity=0.323  Sum_probs=67.1

Q ss_pred             EEEECCCCceE--EEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCE
Q psy14511        221 YTWNTKTNKTQ--LLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNL  296 (488)
Q Consensus       221 ~iw~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~  296 (488)
                      .+|+...++..  .+..++  ....+.|.+++|+...++.| ..||.|.+||...+...  +....-....++|  +|..
T Consensus       239 ciYE~~r~klqrvsvtsip--L~s~v~~ca~sp~E~kLvlG-C~DgSiiLyD~~~~~t~--~~ka~~~P~~iaWHp~gai  313 (545)
T PF11768_consen  239 CIYECSRNKLQRVSVTSIP--LPSQVICCARSPSEDKLVLG-CEDGSIILYDTTRGVTL--LAKAEFIPTLIAWHPDGAI  313 (545)
T ss_pred             EEEEeecCceeEEEEEEEe--cCCcceEEecCcccceEEEE-ecCCeEEEEEcCCCeee--eeeecccceEEEEcCCCcE
Confidence            34555544332  333333  67789999999999999999 99999999998775332  2233445677888  7889


Q ss_pred             EEEeecCCeEEEEECcCCC
Q psy14511        297 LSCGTIGGNILHYDVRTHS  315 (488)
Q Consensus       297 l~~~~~dg~i~i~d~~~~~  315 (488)
                      +++|+..|.+.+||+.-..
T Consensus       314 ~~V~s~qGelQ~FD~ALsp  332 (545)
T PF11768_consen  314 FVVGSEQGELQCFDMALSP  332 (545)
T ss_pred             EEEEcCCceEEEEEeecCc
Confidence            9999999999999987643

>smart00320 WD40 WD40 repeats

Probab=97.95  E-value=3.2e-05  Score=43.76  Aligned_cols=39  Identities=38%  Similarity=0.595  Sum_probs=34.5

Q ss_pred             cceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEe
Q psy14511        395 LHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWN  433 (488)
Q Consensus       395 ~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~  433 (488)
                      +++...+..|...|.++.|+++++++++++.|+.+++|+
T Consensus         2 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        2 GELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             cEEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            345667778999999999999999999999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=97.93  E-value=0.012  Score=51.39  Aligned_cols=216  Identities=12%  Similarity=0.098  Sum_probs=125.2

Q ss_pred             CCCcEEEEECCCeEEEEECC-CCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeee------
Q psy14511        207 GYHDTLAVALDTSVYTWNTK-TNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQK------  279 (488)
Q Consensus       207 ~~~~~~~~~~d~~v~iw~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~------  279 (488)
                      .++.++.|+.+| +++++.. ........     ....|..+...|+-+.+++-  .|+.+.++++..-.....      
T Consensus         6 ~~~~L~vGt~~G-l~~~~~~~~~~~~~i~-----~~~~I~ql~vl~~~~~llvL--sd~~l~~~~L~~l~~~~~~~~~~~   77 (275)
T PF00780_consen    6 WGDRLLVGTEDG-LYVYDLSDPSKPTRIL-----KLSSITQLSVLPELNLLLVL--SDGQLYVYDLDSLEPVSTSAPLAF   77 (275)
T ss_pred             CCCEEEEEECCC-EEEEEecCCccceeEe-----ecceEEEEEEecccCEEEEE--cCCccEEEEchhhccccccccccc
Confidence            346778887777 9999983 33333333     33349999999988887777  469999999876433321      


Q ss_pred             --------eccccccEEEEE----ecCCEEEEeecCCeEEEEECcCCC----ccceeeecCCccEEEEEEccCCcEEEEE
Q psy14511        280 --------LRTHMHQVIAMC----WNGNLLSCGTIGGNILHYDVRTHS----DYPTAITREGDVVCGLKWSPNGRYLASG  343 (488)
Q Consensus       280 --------~~~~~~~v~~~~----~~~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~~i~~~~~s~~~~~l~~~  343 (488)
                              .......+..++    ..+...++......|.+|......    ...+.+. -.+.+..++|.  ++.++.+
T Consensus        78 ~~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~-lp~~~~~i~~~--~~~i~v~  154 (275)
T PF00780_consen   78 PKSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEIS-LPDPPSSIAFL--GNKICVG  154 (275)
T ss_pred             cccccccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEE-cCCCcEEEEEe--CCEEEEE
Confidence                    111233455555    134444455555688888876632    1222222 33668889998  6678888


Q ss_pred             ecCeEEEEECCCCCCCcccce---------------eeeeec-CCCCEEEEEccCCCCeEEEEeCCCcceeE--EEeecc
Q psy14511        344 SNNTVKIWDFRQLDAKRPLGL---------------IVPKLK-REGRELVTSHGKQDCSLKMWEYPRLHLIE--ELKIHQ  405 (488)
Q Consensus       344 ~d~~i~iwd~~~~~~~~~~~~---------------~~~~~~-~~~~~l~~~~g~~~~~i~i~d~~~~~~~~--~~~~~~  405 (488)
                      ..+...+.|+.++........               ....+. +++.+|++   . +..-.+.|. .|+..+  .+.- .
T Consensus       155 ~~~~f~~idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Ll~---~-~~~g~fv~~-~G~~~r~~~i~W-~  228 (275)
T PF00780_consen  155 TSKGFYLIDLNTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQLSDNEFLLC---Y-DNIGVFVNK-NGEPSRKSTIQW-S  228 (275)
T ss_pred             eCCceEEEecCCCCceEEeCccCCcchhhhcccCCCceEEEEeCCceEEEE---e-cceEEEEcC-CCCcCcccEEEc-C
Confidence            777788999986644322110               011222 23444444   1 222223332 343332  2322 2


Q ss_pred             ccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcccc
Q psy14511        406 ERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRK  442 (488)
Q Consensus       406 ~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~  442 (488)
                      ..+.++++  ...+|+..+.+ .|.||++.+++....
T Consensus       229 ~~p~~~~~--~~pyli~~~~~-~iEV~~~~~~~lvQ~  262 (275)
T PF00780_consen  229 SAPQSVAY--SSPYLIAFSSN-SIEVRSLETGELVQT  262 (275)
T ss_pred             CchhEEEE--ECCEEEEECCC-EEEEEECcCCcEEEE
Confidence            24556666  34588777665 599999999977543

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=97.90  E-value=0.0085  Score=54.79  Aligned_cols=214  Identities=14%  Similarity=0.153  Sum_probs=140.6

Q ss_pred             CceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecc-ccccEEEEEecCCEEEEeec---CCeEEEEECcCCCcc
Q psy14511        242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRT-HMHQVIAMCWNGNLLSCGTI---GGNILHYDVRTHSDY  317 (488)
Q Consensus       242 ~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~-~~~~v~~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~  317 (488)
                      .....++.++.++.+++....+..|.+.|..+.+......- ....-..+.++++.+..+..   ++.+.+.|..+....
T Consensus        74 ~~p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~vG~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~  153 (381)
T COG3391          74 VYPAGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSIPVGLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVT  153 (381)
T ss_pred             ccccceeeCCCCCeEEEecCCCCeEEEEcCcccceeeEeeeccCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEE
Confidence            34557888999987777635678999999777666655532 22222333446766666554   688888888876533


Q ss_pred             ceeeecCCccEEEEEEccCCcEEEEEe--cCeEEEEECCCCCCCc-c----ccee----eeeecCCCCEEEEEccC-CCC
Q psy14511        318 PTAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAKR-P----LGLI----VPKLKREGRELVTSHGK-QDC  385 (488)
Q Consensus       318 ~~~~~~~~~~i~~~~~s~~~~~l~~~~--d~~i~iwd~~~~~~~~-~----~~~~----~~~~~~~~~~l~~~~g~-~~~  385 (488)
                      .. ...-..+ ..++++|+|+.+..+.  ++.+.+.|.......+ .    ....    ...++|+|..+.++... .++
T Consensus       154 ~~-~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~  231 (381)
T COG3391         154 AT-IPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSN  231 (381)
T ss_pred             EE-EecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEeccCCCc
Confidence            33 3333344 7899999999888777  4999999987664442 1    1111    22899999987775222 236


Q ss_pred             eEEEEeCCCcceeEE-EeeccccEEEEEEcCCCCEEEEEeCC-CcEEEEecCCCCcccccccc----CCcceEEeecC
Q psy14511        386 SLKMWEYPRLHLIEE-LKIHQERILSAVLSPDQTCVAAASAD-ETISIWNCFPRDKKRKARQV----GSGSSLEFAIL  457 (488)
Q Consensus       386 ~i~i~d~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~t~~~d-g~v~iw~~~~~~~~~~~~~~----~~v~~~~~s~~  457 (488)
                      .+...|..++..... ..........+..+|+|+.+...... +.+.+-|..+..........    .....+++.+.
T Consensus       232 ~v~~id~~~~~v~~~~~~~~~~~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~~v~~~~~~~~~~~~~~~~~~~~~~  309 (381)
T COG3391         232 NVLKIDTATGNVTATDLPVGSGAPRGVAVDPAGKAAYVANSQGGTVSVIDGATDRVVKTGPTGNEALGEPVSIAISPL  309 (381)
T ss_pred             eEEEEeCCCceEEEeccccccCCCCceeECCCCCEEEEEecCCCeEEEEeCCCCceeeeecccccccccceeccceee
Confidence            899999988776654 22111145678999999998887544 88999998887766442222    23555666553

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=97.89  E-value=0.0056  Score=54.74  Aligned_cols=208  Identities=15%  Similarity=0.177  Sum_probs=117.5

Q ss_pred             CeEEEEECCCCceEEEEecCCCCCCceEEEE---EcCC----CCeEEEEeC--------CC-CcEEEEECCcc----eee
Q psy14511        218 TSVYTWNTKTNKTQLLVEYPTYDNAYISCVA---WKPR----TTDLAVTNT--------CT-EYIDLWHEQEE----RLI  277 (488)
Q Consensus       218 ~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~---~~~~----~~~l~~~~~--------~~-~~i~i~d~~~~----~~~  277 (488)
                      ..|++.|..+.+....+.++  ....+.+++   +..+    ..++++|.+        .. |.|.++++...    ..+
T Consensus         2 s~i~l~d~~~~~~~~~~~l~--~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l   79 (321)
T PF03178_consen    2 SSIRLVDPTTFEVLDSFELE--PNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKL   79 (321)
T ss_dssp             -EEEEEETTTSSEEEEEEEE--TTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EE
T ss_pred             cEEEEEeCCCCeEEEEEECC--CCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEE
Confidence            46888998888887777776  445555554   3332    466777632        12 89999999873    122


Q ss_pred             eee--ccccccEEEEEecCCEEEEeecCCeEEEEECcCCC-ccceeeecCCccEEEEEEccCCcEEEEEec-CeEEEEEC
Q psy14511        278 QKL--RTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHS-DYPTAITREGDVVCGLKWSPNGRYLASGSN-NTVKIWDF  353 (488)
Q Consensus       278 ~~~--~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d-~~i~iwd~  353 (488)
                      ..+  ....++|++++.-+..++++. ++.|++|++...+ -...........+.++...  +.+++.+.- ..+.++..
T Consensus        80 ~~i~~~~~~g~V~ai~~~~~~lv~~~-g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~--~~~I~vgD~~~sv~~~~~  156 (321)
T PF03178_consen   80 KLIHSTEVKGPVTAICSFNGRLVVAV-GNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVF--KNYILVGDAMKSVSLLRY  156 (321)
T ss_dssp             EEEEEEEESS-EEEEEEETTEEEEEE-TTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEE--TTEEEEEESSSSEEEEEE
T ss_pred             EEEEEEeecCcceEhhhhCCEEEEee-cCEEEEEEccCcccchhhheecceEEEEEEecc--ccEEEEEEcccCEEEEEE
Confidence            222  245788999988444444433 5889999998865 1222222223345555544  668888873 77877755


Q ss_pred             CCCCC-Ccccc-------eeeeeecCCCCEEEEEccCCCCeEEEEeCCC-------c--ceeEEEeec-cccEEEE---E
Q psy14511        354 RQLDA-KRPLG-------LIVPKLKREGRELVTSHGKQDCSLKMWEYPR-------L--HLIEELKIH-QERILSA---V  412 (488)
Q Consensus       354 ~~~~~-~~~~~-------~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~-------~--~~~~~~~~~-~~~v~~~---~  412 (488)
                      +.... ...+.       .....+-++++.+++  +..+|.+.++....       +  ++.....-| ...|+++   +
T Consensus       157 ~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~--~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f~lg~~v~~~~~~~  234 (321)
T PF03178_consen  157 DEENNKLILVARDYQPRWVTAAEFLVDEDTIIV--GDKDGNLFVLRYNPEIPNSRDGDPKLERISSFHLGDIVNSFRRGS  234 (321)
T ss_dssp             ETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEE--EETTSEEEEEEE-SS-SSTTTTTTBEEEEEEEE-SS-EEEEEE--
T ss_pred             EccCCEEEEEEecCCCccEEEEEEecCCcEEEE--EcCCCeEEEEEECCCCcccccccccceeEEEEECCCccceEEEEE
Confidence            43111 11111       112255556666666  68899999998752       1  222222333 4467777   5


Q ss_pred             EcCC--C------CEEEEEeCCCcEEEE
Q psy14511        413 LSPD--Q------TCVAAASADETISIW  432 (488)
Q Consensus       413 ~s~~--~------~~l~t~~~dg~v~iw  432 (488)
                      +.|.  +      ..++.++.+|.|...
T Consensus       235 l~~~~~~~~~~~~~~i~~~T~~G~Ig~l  262 (321)
T PF03178_consen  235 LIPRSGSSESPNRPQILYGTVDGSIGVL  262 (321)
T ss_dssp             SS--SSSS-TTEEEEEEEEETTS-EEEE
T ss_pred             eeecCCCCcccccceEEEEecCCEEEEE
Confidence            5552  2      248888899998843

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=97.85  E-value=0.021  Score=51.93  Aligned_cols=255  Identities=13%  Similarity=0.109  Sum_probs=120.4

Q ss_pred             eEEEEEEccCCcEEEEec-CCeEEEEeccccCcCC----------------------------------------Ccccc
Q psy14511         38 VVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKR----------------------------------------PQVNN   76 (488)
Q Consensus        38 ~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~----------------------------------------~~~~~   76 (488)
                      .|+.+.|+++..-||.|. .|.|.||.+...+...                                        +...+
T Consensus         3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~   82 (395)
T PF08596_consen    3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL   82 (395)
T ss_dssp             -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred             eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence            488999999877777776 8999988775421110                                        00011


Q ss_pred             cccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeecccc
Q psy14511         77 QCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRK  156 (488)
Q Consensus        77 ~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (488)
                      ....++|++++.|.-| + ++.+.+  +|.+.|.|++....+..-.....     ...-........+.|....      
T Consensus        83 ~~~~g~vtal~~S~iG-F-vaigy~--~G~l~viD~RGPavI~~~~i~~~-----~~~~~~~~~vt~ieF~vm~------  147 (395)
T PF08596_consen   83 DAKQGPVTALKNSDIG-F-VAIGYE--SGSLVVIDLRGPAVIYNENIRES-----FLSKSSSSYVTSIEFSVMT------  147 (395)
T ss_dssp             ---S-SEEEEEE-BTS-E-EEEEET--TSEEEEEETTTTEEEEEEEGGG-------T-SS----EEEEEEEEEE------
T ss_pred             eccCCcEeEEecCCCc-E-EEEEec--CCcEEEEECCCCeEEeecccccc-----ccccccccCeeEEEEEEEe------
Confidence            2235789999998766 4 555553  99999999987776665332210     0000000000011111000      


Q ss_pred             ceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCC---CceE-E
Q psy14511        157 KVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKT---NKTQ-L  232 (488)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~---~~~~-~  232 (488)
                          +.+                                  +.      ++.-.+++++..|.+.+|.+.-   +... .
T Consensus       148 ----~~~----------------------------------D~------ySSi~L~vGTn~G~v~~fkIlp~~~g~f~v~  183 (395)
T PF08596_consen  148 ----LGG----------------------------------DG------YSSICLLVGTNSGNVLTFKILPSSNGRFSVQ  183 (395)
T ss_dssp             -----TT----------------------------------SS------SEEEEEEEEETTSEEEEEEEEE-GGG-EEEE
T ss_pred             ----cCC----------------------------------Cc------ccceEEEEEeCCCCEEEEEEecCCCCceEEE
Confidence                000                                  00      0012467778889999987651   2111 1


Q ss_pred             EEecCCCCCCceEEEE-EcCCC--------------------CeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEE
Q psy14511        233 LVEYPTYDNAYISCVA-WKPRT--------------------TDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMC  291 (488)
Q Consensus       233 ~~~~~~~~~~~i~~~~-~~~~~--------------------~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~  291 (488)
                      .......+..++..+. ++.+.                    +.+++. ..+..++++...+.+..............+.
T Consensus       184 ~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVv-vSe~~irv~~~~~~k~~~K~~~~~~~~~~~~  262 (395)
T PF08596_consen  184 FAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVV-VSESDIRVFKPPKSKGAHKSFDDPFLCSSAS  262 (395)
T ss_dssp             EEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEE-E-SSEEEEE-TT---EEEEE-SS-EEEEEEE
T ss_pred             EeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEE-EcccceEEEeCCCCcccceeeccccccceEE
Confidence            1111101445555544 32221                    113333 3577899999887766555442222222222


Q ss_pred             e-------cCCEEEEeecCCeEEEEECcCCCccceeeec---CCccEEEEEEccCCcEEEEEecCeEEEEE
Q psy14511        292 W-------NGNLLSCGTIGGNILHYDVRTHSDYPTAITR---EGDVVCGLKWSPNGRYLASGSNNTVKIWD  352 (488)
Q Consensus       292 ~-------~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~---~~~~i~~~~~s~~~~~l~~~~d~~i~iwd  352 (488)
                      +       .+..|++-..+|.+++|.+..-+........   ....+....++++|..++-.+...+.++.
T Consensus       263 vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~~~~d~~~~~~ssis~~Gdi~~~~gpsE~~l~s  333 (395)
T PF08596_consen  263 VVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLPPPLDSRRLSSSSISRNGDIFYWTGPSEIQLFS  333 (395)
T ss_dssp             EEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-SS---HHHHTT-EE-TTS-EEEE-SSSEEEEEE
T ss_pred             EEeecccCCceEEEEEECCCcEEEEECCCchHhhcccCCCccccccccccEECCCCCEEEEeCcccEEEEE
Confidence            2       4677888899999999999875432221111   11223456778899988877754444443

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.82  E-value=0.0013  Score=54.30  Aligned_cols=85  Identities=18%  Similarity=0.236  Sum_probs=58.4

Q ss_pred             EEEeecCC-eEEEEEcccCccccee-------ecccCceEEEEEEccCCcEEEEec------CCeEEEEeccccCcCCCc
Q psy14511          8 LSCGTIGG-NILHYDVRTHSDYPTA-------ITREGDVVCGLKWSPNGRYLASGS------NNTVKIWDFRQLDAKRPQ   73 (488)
Q Consensus         8 la~g~~dg-~i~iwd~~~~~~~~~~-------~~~h~~~V~~l~~sp~g~~las~~------d~~i~vwd~~~~~~~~~~   73 (488)
                      ++.+-.-| ...++|....+.+...       +-+|.      .|||||++|....      .|.|-|||...  ....+
T Consensus        83 vafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHG------vfs~dG~~LYATEndfd~~rGViGvYd~r~--~fqrv  154 (366)
T COG3490          83 VAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHG------VFSPDGRLLYATENDFDPNRGVIGVYDARE--GFQRV  154 (366)
T ss_pred             EEEEecCCceEEEECCCCCcCcEEEecccCceeeccc------ccCCCCcEEEeecCCCCCCCceEEEEeccc--cccee
Confidence            34443333 3457787766643221       23443      5999999998764      38999999873  34566


Q ss_pred             ccccccccceeEEEEecCCCeEEeeeC
Q psy14511         74 VNNQCHLSAVKAIAWCPWEPTLLATGG  100 (488)
Q Consensus        74 ~~~~~h~~~v~~l~~~~~~~~l~~~~~  100 (488)
                      .++..|.-....+.|.+||+.++...+
T Consensus       155 gE~~t~GiGpHev~lm~DGrtlvvanG  181 (366)
T COG3490         155 GEFSTHGIGPHEVTLMADGRTLVVANG  181 (366)
T ss_pred             cccccCCcCcceeEEecCCcEEEEeCC
Confidence            677778878889999999988776644

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=97.80  E-value=0.00089  Score=65.15  Aligned_cols=135  Identities=13%  Similarity=0.149  Sum_probs=98.3

Q ss_pred             CCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcC-----CCCeEEEEeCCCCcEEEEECCcce--eeee-e--ccccc
Q psy14511        216 LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKP-----RTTDLAVTNTCTEYIDLWHEQEER--LIQK-L--RTHMH  285 (488)
Q Consensus       216 ~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~l~~~~~~~~~i~i~d~~~~~--~~~~-~--~~~~~  285 (488)
                      ....|+-.|++.|+.+..+...  ...+|..++-..     .....++| -.+..+..||.+-..  .+.. .  -....
T Consensus       502 ~~~~ly~mDLe~GKVV~eW~~~--~~~~v~~~~p~~K~aqlt~e~tflG-ls~n~lfriDpR~~~~k~v~~~~k~Y~~~~  578 (794)
T PF08553_consen  502 NPNKLYKMDLERGKVVEEWKVH--DDIPVVDIAPDSKFAQLTNEQTFLG-LSDNSLFRIDPRLSGNKLVDSQSKQYSSKN  578 (794)
T ss_pred             CCCceEEEecCCCcEEEEeecC--CCcceeEecccccccccCCCceEEE-ECCCceEEeccCCCCCceeeccccccccCC
Confidence            4678999999999999988874  233355544221     12344556 678899999988632  2211 1  11334


Q ss_pred             cEEEEEe-cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECC
Q psy14511        286 QVIAMCW-NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFR  354 (488)
Q Consensus       286 ~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~  354 (488)
                      ...|++- ...+||+|+.+|.|++||-. +......+++-..+|.+|..+.||+++++.++..+.+++..
T Consensus       579 ~Fs~~aTt~~G~iavgs~~G~IRLyd~~-g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc~tyLlLi~t~  647 (794)
T PF08553_consen  579 NFSCFATTEDGYIAVGSNKGDIRLYDRL-GKRAKTALPGLGDPIIGIDVTADGKWILATCKTYLLLIDTL  647 (794)
T ss_pred             CceEEEecCCceEEEEeCCCcEEeeccc-chhhhhcCCCCCCCeeEEEecCCCcEEEEeecceEEEEEEe
Confidence            5667777 46899999999999999953 45566677788899999999999999999999899998864

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>KOG1897|consensus

Probab=97.80  E-value=0.043  Score=53.79  Aligned_cols=107  Identities=14%  Similarity=0.238  Sum_probs=74.5

Q ss_pred             EEEEEEccC-CcEEEEEe----------c-CeEEEEECCCCCCCcccceeee-----ee-cCCCCEEEEEccCCCCeEEE
Q psy14511        328 VCGLKWSPN-GRYLASGS----------N-NTVKIWDFRQLDAKRPLGLIVP-----KL-KREGRELVTSHGKQDCSLKM  389 (488)
Q Consensus       328 i~~~~~s~~-~~~l~~~~----------d-~~i~iwd~~~~~~~~~~~~~~~-----~~-~~~~~~l~~~~g~~~~~i~i  389 (488)
                      +.+..|..| +.++++|.          . |.|.+|.+......+.+.....     +. --+|+++|..    +..|++
T Consensus       777 i~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v~Gav~aL~~fngkllA~I----n~~vrL  852 (1096)
T KOG1897|consen  777 IISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVVKGAVYALVEFNGKLLAGI----NQSVRL  852 (1096)
T ss_pred             eeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeeeccceeehhhhCCeEEEec----CcEEEE
Confidence            445557766 66777662          2 7788888877433333322211     22 3466777654    678999


Q ss_pred             EeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCC
Q psy14511        390 WEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRD  438 (488)
Q Consensus       390 ~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~  438 (488)
                      |+..+.+.++.-..|..++..+...-.|..++.|..-+.+.+-.....+
T Consensus       853 ye~t~~~eLr~e~~~~~~~~aL~l~v~gdeI~VgDlm~Sitll~y~~~e  901 (1096)
T KOG1897|consen  853 YEWTTERELRIECNISNPIIALDLQVKGDEIAVGDLMRSITLLQYKGDE  901 (1096)
T ss_pred             EEccccceehhhhcccCCeEEEEEEecCcEEEEeeccceEEEEEEeccC
Confidence            9999987777777788899999999999999999988877765554433

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=97.77  E-value=0.034  Score=51.87  Aligned_cols=112  Identities=14%  Similarity=0.169  Sum_probs=69.1

Q ss_pred             ccCCceEEEe-ecCC----eEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-C-----------CeEEEEec
Q psy14511          2 CWNGNLLSCG-TIGG----NILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-N-----------NTVKIWDF   64 (488)
Q Consensus         2 ~~dg~~la~g-~~dg----~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d-----------~~i~vwd~   64 (488)
                      ++||++||.+ +..|    .++++|+.+++.+...+....  -..+.|.+|++.|+... +           ..|+.|++
T Consensus       132 Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~~--~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~~~~~  209 (414)
T PF02897_consen  132 SPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENPK--FSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVYRHKL  209 (414)
T ss_dssp             TTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEEE--SEEEEECTTSSEEEEEECSTTTSS-CCGCCEEEEEEET
T ss_pred             CCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCcccccc--cceEEEeCCCCEEEEEEeCcccccccCCCCcEEEEEEC
Confidence            5699999865 3334    599999999976554443322  22399999988776654 2           13778887


Q ss_pred             cccCcC-CCcccccccccceeEEEEecCCCeEEeeeCCccc-ceEEEEecCCC
Q psy14511         65 RQLDAK-RPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICD-QTVRLWNSMNG  115 (488)
Q Consensus        65 ~~~~~~-~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d-~~i~vwd~~~~  115 (488)
                      .+.... ..+.....+......+..++|+++++.......+ ..+.+.++..+
T Consensus       210 gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~  262 (414)
T PF02897_consen  210 GTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDG  262 (414)
T ss_dssp             TS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCT
T ss_pred             CCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEecccc
Confidence            664433 1222222122225688899999998876553334 56777777664

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=97.76  E-value=0.042  Score=52.55  Aligned_cols=235  Identities=13%  Similarity=0.047  Sum_probs=130.1

Q ss_pred             CCcEEEEECCCeEEEEECCCCceEEEEecCCCCC--CceEE-EEEcCCCCeEEEEeC-----CCCcEEEEECCcceeeee
Q psy14511        208 YHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDN--AYISC-VAWKPRTTDLAVTNT-----CTEYIDLWHEQEERLIQK  279 (488)
Q Consensus       208 ~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~--~~i~~-~~~~~~~~~l~~~~~-----~~~~i~i~d~~~~~~~~~  279 (488)
                      .+.++.++.++.|.-+|..+++..-...... +.  ..+++ ..+. ++ .++++.+     .+|.|..+|.++++.+..
T Consensus       120 ~~~v~v~t~dg~l~ALDa~TGk~~W~~~~~~-~~~~~~~tssP~v~-~g-~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~  196 (527)
T TIGR03075       120 DGKVFFGTLDARLVALDAKTGKVVWSKKNGD-YKAGYTITAAPLVV-KG-KVITGISGGEFGVRGYVTAYDAKTGKLVWR  196 (527)
T ss_pred             CCEEEEEcCCCEEEEEECCCCCEEeeccccc-ccccccccCCcEEE-CC-EEEEeecccccCCCcEEEEEECCCCceeEe
Confidence            4578888899999999999998776554422 11  11111 1111 33 4555412     268899999999887766


Q ss_pred             eccccc-------------------------------cE-EEEEec--CCEEEEeecC-----C-----------eEEEE
Q psy14511        280 LRTHMH-------------------------------QV-IAMCWN--GNLLSCGTIG-----G-----------NILHY  309 (488)
Q Consensus       280 ~~~~~~-------------------------------~v-~~~~~~--~~~l~~~~~d-----g-----------~i~i~  309 (488)
                      +..-..                               .+ ..+++|  ..+++.+..+     +           .|.-.
T Consensus       197 ~~~~p~~~~~~~~~~~~~~~~~~~~tw~~~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAl  276 (527)
T TIGR03075       197 RYTVPGDMGYLDKADKPVGGEPGAKTWPGDAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVAR  276 (527)
T ss_pred             ccCcCCCcccccccccccccccccCCCCCCccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEE
Confidence            432110                               11 122333  3455555422     2           45556


Q ss_pred             ECcCCCcccee-eecCC-------ccEEEEEEccCCc---EEEEEe-cCeEEEEECCCCCCCc--------cc----c--
Q psy14511        310 DVRTHSDYPTA-ITREG-------DVVCGLKWSPNGR---YLASGS-NNTVKIWDFRQLDAKR--------PL----G--  363 (488)
Q Consensus       310 d~~~~~~~~~~-~~~~~-------~~i~~~~~s~~~~---~l~~~~-d~~i~iwd~~~~~~~~--------~~----~--  363 (488)
                      |+++++..-.. ...|.       ....-+.+..+|+   .++.+. +|.+.+.|.++++...        ..    .  
T Consensus       277 d~~TG~~~W~~Q~~~~D~wD~d~~~~p~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i~~~~~~~~~~w~~~~~~~  356 (527)
T TIGR03075       277 DPDTGKIKWHYQTTPHDEWDYDGVNEMILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLLSAEPFVDTVNWATGVDLK  356 (527)
T ss_pred             ccccCCEEEeeeCCCCCCccccCCCCcEEEEeccCCcEEEEEEEeCCCceEEEEECCCCceeccccccCCcccccccCCC
Confidence            77766532211 11221       1111233334665   566666 4999999998876521        00    0  


Q ss_pred             --------------------ee------------eeeecCCCCEEEEEccC-----------------------------
Q psy14511        364 --------------------LI------------VPKLKREGRELVTSHGK-----------------------------  382 (488)
Q Consensus       364 --------------------~~------------~~~~~~~~~~l~~~~g~-----------------------------  382 (488)
                                          ..            ..+++|+..++++....                             
T Consensus       357 ~g~p~~~~~~~~~~~~~~~~~~~~Pg~~Gg~~W~~~A~Dp~~g~~yvp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~  436 (527)
T TIGR03075       357 TGRPIEVPEARSADGKKGKPVGVCPGFLGGKNWQPMAYSPKTGLFYVPANEVCMDYEPEKVSYKKGAAYLGAGLTIKPPP  436 (527)
T ss_pred             CCCCccChhhCcCCCCCCCeeEECCCCcCCCCCCCceECCCCCEEEEecccccccccccccccCCCCceeccccccCCCC
Confidence                                00            01556666555543211                             


Q ss_pred             --CCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcccccccc
Q psy14511        383 --QDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKARQV  446 (488)
Q Consensus       383 --~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~~~~~  446 (488)
                        .-+.|.-+|+.+++.+-..+.......+. ..-.+.+++.++.||.++.+|..+++.+-.....
T Consensus       437 ~~~~g~l~AiD~~tGk~~W~~~~~~p~~~~~-l~t~g~lvf~g~~~G~l~a~D~~TGe~lw~~~~g  501 (527)
T TIGR03075       437 DDHMGSLIAWDPITGKIVWEHKEDFPLWGGV-LATAGDLVFYGTLEGYFKAFDAKTGEELWKFKTG  501 (527)
T ss_pred             CCCceeEEEEeCCCCceeeEecCCCCCCCcc-eEECCcEEEEECCCCeEEEEECCCCCEeEEEeCC
Confidence              12467888888888776654321111111 1225567778888999999999999988544333

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=97.70  E-value=0.033  Score=49.81  Aligned_cols=176  Identities=14%  Similarity=0.088  Sum_probs=102.4

Q ss_pred             CeEEEEEcccCcccceeecccCceEEEEE---EccC----CcEEEEec---C--------CeEEEEecccc-C---cCCC
Q psy14511         15 GNILHYDVRTHSDYPTAITREGDVVCGLK---WSPN----GRYLASGS---N--------NTVKIWDFRQL-D---AKRP   72 (488)
Q Consensus        15 g~i~iwd~~~~~~~~~~~~~h~~~V~~l~---~sp~----g~~las~~---d--------~~i~vwd~~~~-~---~~~~   72 (488)
                      ..|++.|..+.+.+...--.....+.+++   |..+    ..+|+.|.   .        |.|.++++... .   ..+.
T Consensus         2 s~i~l~d~~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~   81 (321)
T PF03178_consen    2 SSIRLVDPTTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKL   81 (321)
T ss_dssp             -EEEEEETTTSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEE
T ss_pred             cEEEEEeCCCCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEE
Confidence            46889998887755332222333455544   4333    56888775   1        88999999873 1   1222


Q ss_pred             cccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCe-eeeeeecCCCccccccccccccccceeEEEEEeee
Q psy14511         73 QVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGK-EKCHVKTDSQQANDETISYREQKKRRHLSFLLHGF  151 (488)
Q Consensus        73 ~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (488)
                      +.. ....++|++++-- ++ +++++.    .+.|.+|++...+ ........                           
T Consensus        82 i~~-~~~~g~V~ai~~~-~~-~lv~~~----g~~l~v~~l~~~~~l~~~~~~~---------------------------  127 (321)
T PF03178_consen   82 IHS-TEVKGPVTAICSF-NG-RLVVAV----GNKLYVYDLDNSKTLLKKAFYD---------------------------  127 (321)
T ss_dssp             EEE-EEESS-EEEEEEE-TT-EEEEEE----TTEEEEEEEETTSSEEEEEEE----------------------------
T ss_pred             EEE-EeecCcceEhhhh-CC-EEEEee----cCEEEEEEccCcccchhhheec---------------------------
Confidence            221 2356889998866 34 455544    6699999998776 32222111                           


Q ss_pred             eccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCC--Cc
Q psy14511        152 EIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKT--NK  229 (488)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~--~~  229 (488)
                                                                   ..+.+..+....+.++++.....+.++..+.  .+
T Consensus       128 ---------------------------------------------~~~~i~sl~~~~~~I~vgD~~~sv~~~~~~~~~~~  162 (321)
T PF03178_consen  128 ---------------------------------------------SPFYITSLSVFKNYILVGDAMKSVSLLRYDEENNK  162 (321)
T ss_dssp             ---------------------------------------------BSSSEEEEEEETTEEEEEESSSSEEEEEEETTTE-
T ss_pred             ---------------------------------------------ceEEEEEEeccccEEEEEEcccCEEEEEEEccCCE
Confidence                                                         0112333444456677777777777764443  33


Q ss_pred             eEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECC
Q psy14511        230 TQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQ  272 (488)
Q Consensus       230 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~  272 (488)
                      ......- . ....++++.+-++++.++++ ..+|.+.++...
T Consensus       163 l~~va~d-~-~~~~v~~~~~l~d~~~~i~~-D~~gnl~~l~~~  202 (321)
T PF03178_consen  163 LILVARD-Y-QPRWVTAAEFLVDEDTIIVG-DKDGNLFVLRYN  202 (321)
T ss_dssp             EEEEEEE-S-S-BEEEEEEEE-SSSEEEEE-ETTSEEEEEEE-
T ss_pred             EEEEEec-C-CCccEEEEEEecCCcEEEEE-cCCCeEEEEEEC
Confidence            3333322 2 46678899998666777777 999999999765

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=97.70  E-value=0.022  Score=47.88  Aligned_cols=78  Identities=13%  Similarity=0.121  Sum_probs=46.6

Q ss_pred             eecccCceEEEEEEccCCcEEEEec--CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEE
Q psy14511         31 AITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVR  108 (488)
Q Consensus        31 ~~~~h~~~V~~l~~sp~g~~las~~--d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~  108 (488)
                      .+.+-...++.++|+|+.+.|++..  .+.|...+.+ ++..+.+. +.+ .+....|++..++.++++.-.   ++.+.
T Consensus        16 ~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~-G~vlr~i~-l~g-~~D~EgI~y~g~~~~vl~~Er---~~~L~   89 (248)
T PF06977_consen   16 PLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSLD-GKVLRRIP-LDG-FGDYEGITYLGNGRYVLSEER---DQRLY   89 (248)
T ss_dssp             E-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEETT---EEEEEE--SS--SSEEEEEE-STTEEEEEETT---TTEEE
T ss_pred             ECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcCC-CCEEEEEe-CCC-CCCceeEEEECCCEEEEEEcC---CCcEE
Confidence            3445555699999999877666655  6788777764 44333322 333 356788899888866555443   88888


Q ss_pred             EEecCC
Q psy14511        109 LWNSMN  114 (488)
Q Consensus       109 vwd~~~  114 (488)
                      ++++..
T Consensus        90 ~~~~~~   95 (248)
T PF06977_consen   90 IFTIDD   95 (248)
T ss_dssp             EEEE--
T ss_pred             EEEEec
Confidence            888744

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>PRK13616 lipoprotein LpqB; Provisional

Probab=97.65  E-value=0.013  Score=56.29  Aligned_cols=111  Identities=12%  Similarity=0.106  Sum_probs=61.3

Q ss_pred             CeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEE---EECCcce-ee---eeec-cccccEEE
Q psy14511        218 TSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDL---WHEQEER-LI---QKLR-THMHQVIA  289 (488)
Q Consensus       218 ~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i---~d~~~~~-~~---~~~~-~~~~~v~~  289 (488)
                      +.+.+.+++.++...  .    ....|..+.|+|||..++.. . ++.|.+   -....+. .+   ..+. .-...+..
T Consensus       430 gql~~~~vd~ge~~~--~----~~g~Issl~wSpDG~RiA~i-~-~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~~~  501 (591)
T PRK13616        430 GQLARTPVDASAVAS--R----VPGPISELQLSRDGVRAAMI-I-GGKVYLAVVEQTEDGQYALTNPREVGPGLGDTAVS  501 (591)
T ss_pred             ceEEEEeccCchhhh--c----cCCCcCeEEECCCCCEEEEE-E-CCEEEEEEEEeCCCCceeecccEEeecccCCcccc
Confidence            344444555444322  2    34579999999999999988 3 577777   3433443 11   1122 22334578


Q ss_pred             EEe-cCCEEEEeecCCeEEEEECcCCCccceeeec--CCccEEEEEEccC
Q psy14511        290 MCW-NGNLLSCGTIGGNILHYDVRTHSDYPTAITR--EGDVVCGLKWSPN  336 (488)
Q Consensus       290 ~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~~i~~~~~s~~  336 (488)
                      +.| ++..|+.+..++.-.+|.+.-.......+..  ...++..++-+++
T Consensus       502 l~W~~~~~L~V~~~~~~~~v~~v~vDG~~~~~~~~~n~~~~v~~vaa~~~  551 (591)
T PRK13616        502 LDWRTGDSLVVGRSDPEHPVWYVNLDGSNSDALPSRNLSAPVVAVAASPS  551 (591)
T ss_pred             ceEecCCEEEEEecCCCCceEEEecCCccccccCCCCccCceEEEecCCc
Confidence            889 4444566666655556655433322222222  2456777777763

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=97.64  E-value=0.034  Score=48.64  Aligned_cols=198  Identities=15%  Similarity=0.156  Sum_probs=111.6

Q ss_pred             ECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccc-----cccEEE
Q psy14511        215 ALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTH-----MHQVIA  289 (488)
Q Consensus       215 ~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~-----~~~v~~  289 (488)
                      -..+.|.-|+..+++... +.    ....+.++..-..+..|+++   +..+.+++.+++..+..+..-     ....+.
T Consensus        44 I~~~~i~r~~~~~g~~~~-~~----~p~~~~~~~~~d~~g~Lv~~---~~g~~~~~~~~~~~~t~~~~~~~~~~~~r~ND  115 (307)
T COG3386          44 ILGGRIHRLDPETGKKRV-FP----SPGGFSSGALIDAGGRLIAC---EHGVRLLDPDTGGKITLLAEPEDGLPLNRPND  115 (307)
T ss_pred             CCCCeEEEecCCcCceEE-EE----CCCCcccceeecCCCeEEEE---ccccEEEeccCCceeEEeccccCCCCcCCCCc
Confidence            378889999988775433 33    23334555554455566655   344666776554442222111     112223


Q ss_pred             EEe--cCCEEEEeec-----------CCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-c-CeEEEEECC
Q psy14511        290 MCW--NGNLLSCGTI-----------GGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-N-NTVKIWDFR  354 (488)
Q Consensus       290 ~~~--~~~~l~~~~~-----------dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d-~~i~iwd~~  354 (488)
                      ...  +|.+.+.-..           -|.++.+|..  ....+....+-..-+.++||||++.|..+. . +.|.-|++.
T Consensus       116 ~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~--g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~~~d  193 (307)
T COG3386         116 GVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPD--GGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRYDLD  193 (307)
T ss_pred             eeEcCCCCEEEeCCCccccCccccCCcceEEEEcCC--CCEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEEEecC
Confidence            333  4555544333           1334444432  234444555445567899999999888887 3 889988886


Q ss_pred             C--CCCCcccceeee----------eecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEc-CCCCEEE
Q psy14511        355 Q--LDAKRPLGLIVP----------KLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLS-PDQTCVA  421 (488)
Q Consensus       355 ~--~~~~~~~~~~~~----------~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s-~~~~~l~  421 (488)
                      .  +...........          +...+|.+.+.+ ....+.|..|+.. ++++..+.-+...+++++|- |+.+.|.
T Consensus       194 ~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a-~~~g~~v~~~~pd-G~l~~~i~lP~~~~t~~~FgG~~~~~L~  271 (307)
T COG3386         194 PATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAA-VWGGGRVVRFNPD-GKLLGEIKLPVKRPTNPAFGGPDLNTLY  271 (307)
T ss_pred             cccCccCCcceEEEccCCCCCCCceEEeCCCCEEEec-ccCCceEEEECCC-CcEEEEEECCCCCCccceEeCCCcCEEE
Confidence            3  211111101100          555666766542 2223489999988 99998888776778888885 3445444


Q ss_pred             EEe
Q psy14511        422 AAS  424 (488)
Q Consensus       422 t~~  424 (488)
                      ..+
T Consensus       272 iTs  274 (307)
T COG3386         272 ITS  274 (307)
T ss_pred             EEe
Confidence            433

>KOG1897|consensus

Probab=97.61  E-value=0.086  Score=51.84  Aligned_cols=249  Identities=11%  Similarity=0.157  Sum_probs=129.7

Q ss_pred             CcEEEEECCCeEEEEEC--CCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecccccc
Q psy14511        209 HDTLAVALDTSVYTWNT--KTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQ  286 (488)
Q Consensus       209 ~~~~~~~~d~~v~iw~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~  286 (488)
                      ..++++..||.+..|.+  .++......+..- ...|+.--.|+..++.-+.+ ..|.-..+|..+..-....+.  -..
T Consensus       596 ~yLlvalgdG~l~~fv~d~~tg~lsd~Kk~~l-Gt~P~~Lr~f~sk~~t~vfa-~sdrP~viY~~n~kLv~spls--~ke  671 (1096)
T KOG1897|consen  596 HYLLVALGDGALLYFVLDINTGQLSDRKKVTL-GTQPISLRTFSSKSRTAVFA-LSDRPTVIYSSNGKLVYSPLS--LKE  671 (1096)
T ss_pred             eEEEEEcCCceEEEEEEEcccceEcccccccc-CCCCcEEEEEeeCCceEEEE-eCCCCEEEEecCCcEEEeccc--hHH
Confidence            45777779998876654  4554433322111 44566666676665544444 355555566544322222221  112


Q ss_pred             EEEEEe---c--CCEEEEeecCCeEEEEECcCCCc-cceeeecCCccEEEEEEccCCcEEEEEec---------------
Q psy14511        287 VIAMCW---N--GNLLSCGTIGGNILHYDVRTHSD-YPTAITREGDVVCGLKWSPNGRYLASGSN---------------  345 (488)
Q Consensus       287 v~~~~~---~--~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~i~~~~~s~~~~~l~~~~d---------------  345 (488)
                      +..++.   +  +..++.+. .+.+++.-+..-++ ..++..- ......+++.+....+++.++               
T Consensus       672 v~~~c~f~s~a~~d~l~~~~-~~~l~i~tid~iqkl~irtvpl-~~~prrI~~q~~sl~~~v~s~r~e~~~~~~~ee~~~  749 (1096)
T KOG1897|consen  672 VNHMCPFNSDAYPDSLASAN-GGALTIGTIDEIQKLHIRTVPL-GESPRRICYQESSLTFGVLSNRIESSAEYYGEEYEV  749 (1096)
T ss_pred             hhhhcccccccCCceEEEec-CCceEEEEecchhhcceeeecC-CCChhheEecccceEEEEEecccccchhhcCCcceE
Confidence            222222   1  23444443 34456555543222 2222222 233556777664444444331               


Q ss_pred             CeEEEEECCCCCCCcccce---------eeeeecCC-CCEEEEEcc--------CCCCeEEEEeCCCcceeEEEeec--c
Q psy14511        346 NTVKIWDFRQLDAKRPLGL---------IVPKLKRE-GRELVTSHG--------KQDCSLKMWEYPRLHLIEELKIH--Q  405 (488)
Q Consensus       346 ~~i~iwd~~~~~~~~~~~~---------~~~~~~~~-~~~l~~~~g--------~~~~~i~i~d~~~~~~~~~~~~~--~  405 (488)
                      ..++++|-.+.+.......         ....|..| +.++++.++        ...|.|.+|.+..+..+.....+  +
T Consensus       750 s~l~vlD~nTf~vl~~hef~~~E~~~Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v~  829 (1096)
T KOG1897|consen  750 SFLRVLDQNTFEVLSSHEFERNETALSIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVVK  829 (1096)
T ss_pred             EEEEEecCCceeEEeeccccccceeeeeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeeec
Confidence            2366777666543221111         12256666 667776432        23578888888764444443322  3


Q ss_pred             ccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcc-ccccccCCcceEEeecCCCceEEEEe
Q psy14511        406 ERILSAVLSPDQTCVAAASADETISIWNCFPRDKK-RKARQVGSGSSLEFAILKQPVSLTAL  466 (488)
Q Consensus       406 ~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~-~~~~~~~~v~~~~~s~~~~~~~~~~~  466 (488)
                      +.+.++.- -+|++||.-  ...|++|+..+.+.+ ....+..++..+...-.+..++..++
T Consensus       830 Gav~aL~~-fngkllA~I--n~~vrLye~t~~~eLr~e~~~~~~~~aL~l~v~gdeI~VgDl  888 (1096)
T KOG1897|consen  830 GAVYALVE-FNGKLLAGI--NQSVRLYEWTTERELRIECNISNPIIALDLQVKGDEIAVGDL  888 (1096)
T ss_pred             cceeehhh-hCCeEEEec--CcEEEEEEccccceehhhhcccCCeEEEEEEecCcEEEEeec
Confidence            44555542 267777654  467999999988544 45666777777777776666655543

>KOG4640|consensus

Probab=97.59  E-value=0.00029  Score=64.48  Aligned_cols=90  Identities=17%  Similarity=0.244  Sum_probs=65.7

Q ss_pred             cEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeecc
Q psy14511        327 VVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQ  405 (488)
Q Consensus       327 ~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~  405 (488)
                      .+..+.|+|.-..+|.+. +|.+-+..+. .                              -++|+         +.-|.
T Consensus        22 ~i~~~ewnP~~dLiA~~t~~gelli~R~n-~------------------------------qRlwt---------ip~p~   61 (665)
T KOG4640|consen   22 NIKRIEWNPKMDLIATRTEKGELLIHRLN-W------------------------------QRLWT---------IPIPG   61 (665)
T ss_pred             ceEEEEEcCccchhheeccCCcEEEEEec-c------------------------------ceeEe---------ccCCC
Confidence            356677777777777666 3666655543 1                              23444         44344


Q ss_pred             ccEE-EEEEcCCCCEEEEEeCCCcEEEEecCCCCcccc--ccccCCcceEEeec
Q psy14511        406 ERIL-SAVLSPDQTCVAAASADETISIWNCFPRDKKRK--ARQVGSGSSLEFAI  456 (488)
Q Consensus       406 ~~v~-~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~--~~~~~~v~~~~~s~  456 (488)
                      ..++ +++|.|||+.||.|-.||+|++-|++.+..+..  ......+.+..|+|
T Consensus        62 ~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~~~~~s~e~~is~~~w~~  115 (665)
T KOG4640|consen   62 ENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLVSFLFSVETDISKGIWDR  115 (665)
T ss_pred             CccceeeeecCCCCEEEEEecCCeEEEEEccCCCceeccccccccchheeeccc
Confidence            4555 999999999999999999999999999988754  66677888888875

>KOG2395|consensus

Probab=97.57  E-value=0.002  Score=58.04  Aligned_cols=135  Identities=13%  Similarity=0.180  Sum_probs=100.5

Q ss_pred             EECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCC-------eEEEEeCCCCcEEEEECCccee--eeeeccc-
Q psy14511        214 VALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTT-------DLAVTNTCTEYIDLWHEQEERL--IQKLRTH-  283 (488)
Q Consensus       214 ~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-------~l~~~~~~~~~i~i~d~~~~~~--~~~~~~~-  283 (488)
                      +.....++-.|++.|+.+....+.   . .|+-+.+.|+.+       .-++| -.+..|.-||++-...  +...+.| 
T Consensus       352 ~~~~~~l~klDIE~GKIVeEWk~~---~-di~mv~~t~d~K~~Ql~~e~TlvG-Ls~n~vfriDpRv~~~~kl~~~q~kq  426 (644)
T KOG2395|consen  352 GGEQDKLYKLDIERGKIVEEWKFE---D-DINMVDITPDFKFAQLTSEQTLVG-LSDNSVFRIDPRVQGKNKLAVVQSKQ  426 (644)
T ss_pred             CCCcCcceeeecccceeeeEeecc---C-CcceeeccCCcchhcccccccEEe-ecCCceEEecccccCcceeeeeeccc
Confidence            336678899999999999888863   2 277777887653       22445 6788899999874221  2222222 


Q ss_pred             ---cccEEEEEe-cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECC
Q psy14511        284 ---MHQVIAMCW-NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFR  354 (488)
Q Consensus       284 ---~~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~  354 (488)
                         .....|++- ...++++|+.+|.|++||- .+......+++...+|..+..+.+|++|++.++..+.+.++.
T Consensus       427 y~~k~nFsc~aTT~sG~IvvgS~~GdIRLYdr-i~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc~tyLlLi~t~  500 (644)
T KOG2395|consen  427 YSTKNNFSCFATTESGYIVVGSLKGDIRLYDR-IGRRAKTALPGLGDAIKHVDVTADGKWILATCKTYLLLIDTL  500 (644)
T ss_pred             cccccccceeeecCCceEEEeecCCcEEeehh-hhhhhhhcccccCCceeeEEeeccCcEEEEecccEEEEEEEe
Confidence               233455555 5679999999999999998 455677788899999999999999999999999888888865

>KOG2444|consensus

Probab=97.55  E-value=0.00017  Score=57.40  Aligned_cols=144  Identities=11%  Similarity=0.099  Sum_probs=80.0

Q ss_pred             EEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEE-EEc
Q psy14511        256 LAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGL-KWS  334 (488)
Q Consensus       256 l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~-~~s  334 (488)
                      +... +.+|.|+-++++..+....-.........+.--+..+++|+.+|.|++|..................|-++ .--
T Consensus        33 l~~~-sa~~~v~~~~~~k~k~s~rse~~~~e~~~v~~~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~  111 (238)
T KOG2444|consen   33 LRAT-SADGLVRERKVRKHKESCRSERFIDEGQRVVTASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNG  111 (238)
T ss_pred             hccc-cCCcccccchhhhhhhhhhhhhhhhcceeecccCceEEeecccceEEEecCCccchHHHhhhcccccceeccccc
Confidence            3444 67888888877653322221111111122222467899999999999998874322221111111222111 111


Q ss_pred             cCCcEEEEEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeecc-ccEEEEEE
Q psy14511        335 PNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQ-ERILSAVL  413 (488)
Q Consensus       335 ~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~-~~v~~~~~  413 (488)
                      .++.+..+                                      +..++.|+.|+++-.+.+.....|. .++.....
T Consensus       112 ~~~~~~c~--------------------------------------~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~~iv  153 (238)
T KOG2444|consen  112 RDSSLGCV--------------------------------------GAQDGRIRACNIKPNKVLGYVGQHNFESGEELIV  153 (238)
T ss_pred             cccceeEE--------------------------------------eccCCceeeeccccCceeeeeccccCCCcceeEE
Confidence            12222222                                      4556666666666566666666666 56666666


Q ss_pred             cCCCCEEEEE--eCCCcEEEEecCCCC
Q psy14511        414 SPDQTCVAAA--SADETISIWNCFPRD  438 (488)
Q Consensus       414 s~~~~~l~t~--~~dg~v~iw~~~~~~  438 (488)
                      +..+++++.+  |.|..++.|++..-.
T Consensus       154 v~sd~~i~~a~~S~d~~~k~W~ve~~~  180 (238)
T KOG2444|consen  154 VGSDEFLKIADTSHDRVLKKWNVEKIK  180 (238)
T ss_pred             ecCCceEEeeccccchhhhhcchhhhh
Confidence            6777788887  888888888887543

>PRK13616 lipoprotein LpqB; Provisional

Probab=97.54  E-value=0.012  Score=56.52  Aligned_cols=96  Identities=5%  Similarity=-0.101  Sum_probs=56.0

Q ss_pred             ccCCceEEEee------cCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEecCC-------------eEEEE
Q psy14511          2 CWNGNLLSCGT------IGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNN-------------TVKIW   62 (488)
Q Consensus         2 ~~dg~~la~g~------~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~d~-------------~i~vw   62 (488)
                      +.||+.+|.-.      .|+.-.||-...+........+.  ..+...|+|||+.|++..|+             .+.+.
T Consensus       358 SpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~~~~lt~g~--~~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~gql~~~  435 (591)
T PRK13616        358 SRSGRQVAAVVTLGRGAPDPASSLWVGPLGGVAVQVLEGH--SLTRPSWSLDADAVWVVVDGNTVVRVIRDPATGQLART  435 (591)
T ss_pred             CCCCCEEEEEEeecCCCCCcceEEEEEeCCCcceeeecCC--CCCCceECCCCCceEEEecCcceEEEeccCCCceEEEE
Confidence            45888887554      24433444333233222333333  37889999999988877532             23333


Q ss_pred             eccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEE
Q psy14511         63 DFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRL  109 (488)
Q Consensus        63 d~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~v  109 (488)
                      +++.++..+      ...+.|..+.|||||..++...    ++.|.+
T Consensus       436 ~vd~ge~~~------~~~g~Issl~wSpDG~RiA~i~----~g~v~V  472 (591)
T PRK13616        436 PVDASAVAS------RVPGPISELQLSRDGVRAAMII----GGKVYL  472 (591)
T ss_pred             eccCchhhh------ccCCCcCeEEECCCCCEEEEEE----CCEEEE
Confidence            433322111      2346799999999999988765    445544

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=97.53  E-value=0.062  Score=48.22  Aligned_cols=239  Identities=10%  Similarity=0.138  Sum_probs=105.1

Q ss_pred             CceEEEEecCCCCCCceEEEEEc-----------CCCCeEEEEeCCCCcEEEEECCc----ceeeeeecc---cc-----
Q psy14511        228 NKTQLLVEYPTYDNAYISCVAWK-----------PRTTDLAVTNTCTEYIDLWHEQE----ERLIQKLRT---HM-----  284 (488)
Q Consensus       228 ~~~~~~~~~~~~~~~~i~~~~~~-----------~~~~~l~~~~~~~~~i~i~d~~~----~~~~~~~~~---~~-----  284 (488)
                      ++.+..+.++. ...+....-|+           .+.++|++.+-.++.|+++|+.+    .+..+.++.   +.     
T Consensus        52 gqVIhrl~mp~-~GDElHH~GWNaCSsc~~~~~~~~Rr~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s  130 (461)
T PF05694_consen   52 GQVIHRLPMPN-RGDELHHSGWNACSSCHYGDPSKERRYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLS  130 (461)
T ss_dssp             TSEEEEEE-SS-S---B---EES--GGSTT--TT--S-EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EE
T ss_pred             ccEEEEEeCCC-CCCccccccCcccccccCCCCcccCCcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCC
Confidence            34555555543 33455555554           35678888867899999999873    344555542   11     


Q ss_pred             ccEEEEEe-cCCEEEEeec------CCeEEEEECcCCCccceeeec---CCccEEEEEEccCCcEEEEEe----------
Q psy14511        285 HQVIAMCW-NGNLLSCGTI------GGNILHYDVRTHSDYPTAITR---EGDVVCGLKWSPNGRYLASGS----------  344 (488)
Q Consensus       285 ~~v~~~~~-~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~---~~~~i~~~~~s~~~~~l~~~~----------  344 (488)
                      .+-+.-+. +|+.++++-.      .|.+.++|-++-. .......   ....-+.+.|.|..+.+++..          
T Consensus       131 ~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~tf~-v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~G  209 (461)
T PF05694_consen  131 RPHTVHCLPDGRIMISALGDADGNGPGGFVLLDGETFE-VKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKG  209 (461)
T ss_dssp             EEEEEEE-SS--EEEEEEEETTS-S--EEEEE-TTT---EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT-
T ss_pred             CCceeeecCCccEEEEeccCCCCCCCCcEEEEcCcccc-ccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccC
Confidence            11111222 6777776422      2456677766432 2222221   122245667777777776651          


Q ss_pred             -----------cCeEEEEECCCCCCCccccee--------ee-eecCCCCEEEEEccCCCCeEEEE-eCCCcc----eeE
Q psy14511        345 -----------NNTVKIWDFRQLDAKRPLGLI--------VP-KLKREGRELVTSHGKQDCSLKMW-EYPRLH----LIE  399 (488)
Q Consensus       345 -----------d~~i~iwd~~~~~~~~~~~~~--------~~-~~~~~~~~l~~~~g~~~~~i~i~-d~~~~~----~~~  399 (488)
                                 ..++.+||+.+.+..+.+..-        +. ...|+..+-++.+.- ..+|..| ....++    .+.
T Consensus       210 f~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aL-ss~i~~~~k~~~g~W~a~kVi  288 (461)
T PF05694_consen  210 FNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCAL-SSSIWRFYKDDDGEWAAEKVI  288 (461)
T ss_dssp             --TTTHHHH-S--EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE---EEEEEEEE-ETTEEEEEEEE
T ss_pred             CChhHhhcccccCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccceEEEEec-cceEEEEEEcCCCCeeeeEEE
Confidence                       157999999988766555432        11 445555555553332 3334433 333332    222


Q ss_pred             EEeec-----------------cccEEEEEEcCCCCEEEEEe-CCCcEEEEecCCCCcccccc-----------------
Q psy14511        400 ELKIH-----------------QERILSAVLSPDQTCVAAAS-ADETISIWNCFPRDKKRKAR-----------------  444 (488)
Q Consensus       400 ~~~~~-----------------~~~v~~~~~s~~~~~l~t~~-~dg~v~iw~~~~~~~~~~~~-----------------  444 (488)
                      ++..-                 ..-|+++..|.|.++|.... .+|.|+.||+......++.+                 
T Consensus       289 ~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~  368 (461)
T PF05694_consen  289 DIPAKKVEGWILPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVK  368 (461)
T ss_dssp             EE--EE--SS---GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS-
T ss_pred             ECCCcccCcccccccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCcccc
Confidence            22211                 23479999999999987665 78999999999765443321                 


Q ss_pred             ---ccCCcceEEeecCCCceEEEEeeec
Q psy14511        445 ---QVGSGSSLEFAILKQPVSLTALLRS  469 (488)
Q Consensus       445 ---~~~~v~~~~~s~~~~~~~~~~~~~~  469 (488)
                         ..+....+..|.||+++-+...|.+
T Consensus       369 g~~l~GgPqMvqlS~DGkRlYvTnSLys  396 (461)
T PF05694_consen  369 GKRLRGGPQMVQLSLDGKRLYVTNSLYS  396 (461)
T ss_dssp             -----S----EEE-TTSSEEEEE----H
T ss_pred             ccccCCCCCeEEEccCCeEEEEEeeccc
Confidence               1234478899999999987765543

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=97.53  E-value=0.093  Score=50.23  Aligned_cols=55  Identities=15%  Similarity=0.267  Sum_probs=34.8

Q ss_pred             CcEEEEECCcceeeeeeccccccEEE-EEecCCEEEEeecCCeEEEEECcCCCccc
Q psy14511        264 EYIDLWHEQEERLIQKLRTHMHQVIA-MCWNGNLLSCGTIGGNILHYDVRTHSDYP  318 (488)
Q Consensus       264 ~~i~i~d~~~~~~~~~~~~~~~~v~~-~~~~~~~l~~~~~dg~i~i~d~~~~~~~~  318 (488)
                      |.|.-+|+.+++.....+........ +...+.+++.++.+|.++.+|.++++...
T Consensus       441 g~l~AiD~~tGk~~W~~~~~~p~~~~~l~t~g~lvf~g~~~G~l~a~D~~TGe~lw  496 (527)
T TIGR03075       441 GSLIAWDPITGKIVWEHKEDFPLWGGVLATAGDLVFYGTLEGYFKAFDAKTGEELW  496 (527)
T ss_pred             eeEEEEeCCCCceeeEecCCCCCCCcceEECCcEEEEECCCCeEEEEECCCCCEeE
Confidence            34666777777666655432211111 23356677788889999999999986443

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=97.50  E-value=0.018  Score=52.23  Aligned_cols=82  Identities=12%  Similarity=0.054  Sum_probs=55.5

Q ss_pred             eecCCccEEEEEEccCCcEEEEEec-CeEEEEECCCCCCCcccceeee-------eecC---------------CCCEEE
Q psy14511        321 ITREGDVVCGLKWSPNGRYLASGSN-NTVKIWDFRQLDAKRPLGLIVP-------KLKR---------------EGRELV  377 (488)
Q Consensus       321 ~~~~~~~i~~~~~s~~~~~l~~~~d-~~i~iwd~~~~~~~~~~~~~~~-------~~~~---------------~~~~l~  377 (488)
                      +......+.+++.+|++++.|+..+ |.|.++|+.++...+..+..-.       ....               ....++
T Consensus       303 l~D~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~L  382 (415)
T PF14655_consen  303 LPDSKREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFALFL  382 (415)
T ss_pred             eccCCceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcceEEE
Confidence            4444556889999999988877655 9999999998866655443311       1111               112334


Q ss_pred             EEccCCCCeEEEEeCCCcceeEEEe
Q psy14511        378 TSHGKQDCSLKMWEYPRLHLIEELK  402 (488)
Q Consensus       378 ~~~g~~~~~i~i~d~~~~~~~~~~~  402 (488)
                      +.....-|.|.||.+++|..+..+.
T Consensus       383 vIyaprRg~lEvW~~~~g~Rv~a~~  407 (415)
T PF14655_consen  383 VIYAPRRGILEVWSMRQGPRVAAFN  407 (415)
T ss_pred             EEEeccCCeEEEEecCCCCEEEEEE
Confidence            4446788999999999887766554

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=97.49  E-value=0.07  Score=47.93  Aligned_cols=120  Identities=10%  Similarity=0.183  Sum_probs=61.3

Q ss_pred             ceEEEEEcCCCCeEEEEe-------------------CCCCcEEEEECCcceeeeeecccc--ccEEEEEe--c--C-CE
Q psy14511        243 YISCVAWKPRTTDLAVTN-------------------TCTEYIDLWHEQEERLIQKLRTHM--HQVIAMCW--N--G-NL  296 (488)
Q Consensus       243 ~i~~~~~~~~~~~l~~~~-------------------~~~~~i~i~d~~~~~~~~~~~~~~--~~v~~~~~--~--~-~~  296 (488)
                      .-..+-|.|..+.++++.                   ....++.+||+.+.+.++++.-..  .....+.|  +  . .-
T Consensus       182 ~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~g  261 (461)
T PF05694_consen  182 FGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYG  261 (461)
T ss_dssp             ----EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EE
T ss_pred             CCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccce
Confidence            344566666666666541                   234589999999999998886533  23456677  3  2 23


Q ss_pred             EEEeecCCeEEEEEC-cCCC---ccceeee-----------------cCCccEEEEEEccCCcEEEEEe--cCeEEEEEC
Q psy14511        297 LSCGTIGGNILHYDV-RTHS---DYPTAIT-----------------REGDVVCGLKWSPNGRYLASGS--NNTVKIWDF  353 (488)
Q Consensus       297 l~~~~~dg~i~i~d~-~~~~---~~~~~~~-----------------~~~~~i~~~~~s~~~~~l~~~~--d~~i~iwd~  353 (488)
                      ++.+....+|..|-- ..+.   +.+..+.                 .-..-|+.+..|.|.++|..++  .|.++.||+
T Consensus       262 Fvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDI  341 (461)
T PF05694_consen  262 FVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDI  341 (461)
T ss_dssp             EEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-
T ss_pred             EEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEec
Confidence            333334445554433 2221   0111111                 1124478999999999999998  499999999


Q ss_pred             CCCCCCccc
Q psy14511        354 RQLDAKRPL  362 (488)
Q Consensus       354 ~~~~~~~~~  362 (488)
                      .+....+..
T Consensus       342 SDP~~Pkl~  350 (461)
T PF05694_consen  342 SDPFNPKLV  350 (461)
T ss_dssp             SSTTS-EEE
T ss_pred             CCCCCCcEE
Confidence            987655444

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>smart00320 WD40 WD40 repeats

Probab=97.43  E-value=0.00035  Score=39.24  Aligned_cols=34  Identities=38%  Similarity=0.804  Sum_probs=30.0

Q ss_pred             eeecccCceEEEEEEccCCcEEEEec-CCeEEEEe
Q psy14511         30 TAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWD   63 (488)
Q Consensus        30 ~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd   63 (488)
                      ..+..|...|.+++|+|+++++++++ |+.+++|+
T Consensus         6 ~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        6 KTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             EEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            44567888999999999999999998 99999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=97.41  E-value=0.0051  Score=60.08  Aligned_cols=141  Identities=11%  Similarity=0.166  Sum_probs=90.6

Q ss_pred             CeEEEEeCCCCcEEEEECCcceeeeeecccccc-EEEEEec-------CCEEEEeecCCeEEEEECcCCCccceeee---
Q psy14511        254 TDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQ-VIAMCWN-------GNLLSCGTIGGNILHYDVRTHSDYPTAIT---  322 (488)
Q Consensus       254 ~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~-v~~~~~~-------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---  322 (488)
                      +.|+........|+-.|+..|+.+..+..+... |..++.+       +...+.|-.+..+..||.+-....+....   
T Consensus       494 ~mil~~~~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k~  573 (794)
T PF08553_consen  494 NMILLDPNNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQ  573 (794)
T ss_pred             ceEeecCCCCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeeccccc
Confidence            444444234678999999999999999887654 7777762       45567788888999999986432111111   


Q ss_pred             -cCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEE
Q psy14511        323 -REGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEE  400 (488)
Q Consensus       323 -~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~  400 (488)
                       .......|++-+.+| +||+|+ +|.||+||-                                       -..+....
T Consensus       574 Y~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~---------------------------------------~g~~AKT~  613 (794)
T PF08553_consen  574 YSSKNNFSCFATTEDG-YIAVGSNKGDIRLYDR---------------------------------------LGKRAKTA  613 (794)
T ss_pred             cccCCCceEEEecCCc-eEEEEeCCCcEEeecc---------------------------------------cchhhhhc
Confidence             122335555555555 444444 366666652                                       11112234


Q ss_pred             EeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecC
Q psy14511        401 LKIHQERILSAVLSPDQTCVAAASADETISIWNCF  435 (488)
Q Consensus       401 ~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~  435 (488)
                      +.+-..+|.+|..+.||++|++.+ +..+.+++..
T Consensus       614 lp~lG~pI~~iDvt~DGkwilaTc-~tyLlLi~t~  647 (794)
T PF08553_consen  614 LPGLGDPIIGIDVTADGKWILATC-KTYLLLIDTL  647 (794)
T ss_pred             CCCCCCCeeEEEecCCCcEEEEee-cceEEEEEEe
Confidence            566678999999999999987766 4457777753

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>KOG4640|consensus

Probab=97.38  E-value=0.0011  Score=60.72  Aligned_cols=94  Identities=18%  Similarity=0.282  Sum_probs=76.7

Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEE-EEEe--cCCEEEEeecCCeEEEEECcCCCc
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVI-AMCW--NGNLLSCGTIGGNILHYDVRTHSD  316 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~-~~~~--~~~~l~~~~~dg~i~i~d~~~~~~  316 (488)
                      ....+.-+.|+|.-..+|+. ..+|.|.+..+. .+.+.++.-+..+++ +++|  ||+.++.|-.||+|++.|..++..
T Consensus        19 l~~~i~~~ewnP~~dLiA~~-t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~   96 (665)
T KOG4640|consen   19 LPINIKRIEWNPKMDLIATR-TEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGR   96 (665)
T ss_pred             cccceEEEEEcCccchhhee-ccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCc
Confidence            34567889999999999999 999999999988 678888887777777 9999  899999999999999999998765


Q ss_pred             cceeeecCCccEEEEEEcc
Q psy14511        317 YPTAITREGDVVCGLKWSP  335 (488)
Q Consensus       317 ~~~~~~~~~~~i~~~~~s~  335 (488)
                      ...........|.++-|+|
T Consensus        97 l~~~~~s~e~~is~~~w~~  115 (665)
T KOG4640|consen   97 LVSFLFSVETDISKGIWDR  115 (665)
T ss_pred             eeccccccccchheeeccc
Confidence            4444444455677777763

>PHA02713 hypothetical protein; Provisional

Probab=97.30  E-value=0.031  Score=53.93  Aligned_cols=212  Identities=8%  Similarity=0.016  Sum_probs=111.1

Q ss_pred             eEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCC------CcEEEEECCcceee--eeeccccccEEEE
Q psy14511        219 SVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCT------EYIDLWHEQEERLI--QKLRTHMHQVIAM  290 (488)
Q Consensus       219 ~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~------~~i~i~d~~~~~~~--~~~~~~~~~v~~~  290 (488)
                      .+..||..+++......++. .... .+++. -++...++| +.+      ..+..||..+..-.  ..+..........
T Consensus       273 ~v~~yd~~~~~W~~l~~mp~-~r~~-~~~a~-l~~~IYviG-G~~~~~~~~~~v~~Yd~~~n~W~~~~~m~~~R~~~~~~  348 (557)
T PHA02713        273 CILVYNINTMEYSVISTIPN-HIIN-YASAI-VDNEIIIAG-GYNFNNPSLNKVYKINIENKIHVELPPMIKNRCRFSLA  348 (557)
T ss_pred             CEEEEeCCCCeEEECCCCCc-cccc-eEEEE-ECCEEEEEc-CCCCCCCccceEEEEECCCCeEeeCCCCcchhhceeEE
Confidence            57789988887665555433 2111 22332 245555555 532      34778887765322  1222122233344


Q ss_pred             EecCCEEEEeecCC-----eEEEEECcCCC-ccceeeecCCccEEEEEEccCCcEEEEEe-c------------------
Q psy14511        291 CWNGNLLSCGTIGG-----NILHYDVRTHS-DYPTAITREGDVVCGLKWSPNGRYLASGS-N------------------  345 (488)
Q Consensus       291 ~~~~~~l~~~~~dg-----~i~i~d~~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d------------------  345 (488)
                      ..+++..+.|+.++     .+..||..+.. .....+.........+  .-+|+..+.|+ +                  
T Consensus       349 ~~~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r~~~~~~--~~~g~IYviGG~~~~~~~~~~~~~~~~~~~~  426 (557)
T PHA02713        349 VIDDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSSYGMC--VLDQYIYIIGGRTEHIDYTSVHHMNSIDMEE  426 (557)
T ss_pred             EECCEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCcccccccEE--EECCEEEEEeCCCcccccccccccccccccc
Confidence            45888888888764     47889987642 1111111111111122  22677777776 3                  


Q ss_pred             -----CeEEEEECCCCCC--Cccccee---eeeecCCCCEEEEEccCCC------CeEEEEeCCC-cc--eeEEEeeccc
Q psy14511        346 -----NTVKIWDFRQLDA--KRPLGLI---VPKLKREGRELVTSHGKQD------CSLKMWEYPR-LH--LIEELKIHQE  406 (488)
Q Consensus       346 -----~~i~iwd~~~~~~--~~~~~~~---~~~~~~~~~~l~~~~g~~~------~~i~i~d~~~-~~--~~~~~~~~~~  406 (488)
                           ..+..||..+.+-  ..++...   .....-+++..+.  |+.+      ..+..||..+ .+  .+..+.....
T Consensus       427 ~~~~~~~ve~YDP~td~W~~v~~m~~~r~~~~~~~~~~~IYv~--GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~  504 (557)
T PHA02713        427 DTHSSNKVIRYDTVNNIWETLPNFWTGTIRPGVVSHKDDIYVV--CDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLS  504 (557)
T ss_pred             cccccceEEEECCCCCeEeecCCCCcccccCcEEEECCEEEEE--eCCCCCCccceeEEEecCCCCCCeeEccccCcccc
Confidence                 2477788765421  1111111   1133345555444  3332      2467899886 33  3334433333


Q ss_pred             cEEEEEEcCCCCEEEEEeCCC--cEEEEecCCCCcc
Q psy14511        407 RILSAVLSPDQTCVAAASADE--TISIWNCFPRDKK  440 (488)
Q Consensus       407 ~v~~~~~s~~~~~l~t~~~dg--~v~iw~~~~~~~~  440 (488)
                      ....+.+  +++..++|+.||  .+..||..+.+-.
T Consensus       505 ~~~~~~~--~~~iyv~Gg~~~~~~~e~yd~~~~~W~  538 (557)
T PHA02713        505 ALHTILH--DNTIMMLHCYESYMLQDTFNVYTYEWN  538 (557)
T ss_pred             cceeEEE--CCEEEEEeeecceeehhhcCccccccc
Confidence            3333333  788999999888  7778888776654

>KOG2079|consensus

Probab=97.20  E-value=0.0011  Score=64.88  Aligned_cols=104  Identities=16%  Similarity=0.285  Sum_probs=67.4

Q ss_pred             CceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccce
Q psy14511          5 GNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAV   83 (488)
Q Consensus         5 g~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v   83 (488)
                      +..++.|+..|.+...|+...-.....-..-.++|++++|+.+|++++.|- +|.|.+||+..++..+.+.........|
T Consensus        99 ~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~v  178 (1206)
T KOG2079|consen   99 VVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTGV  178 (1206)
T ss_pred             eeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccceE
Confidence            456888999999999998764222122233457899999999999999996 9999999998765544443322222234


Q ss_pred             eEEEEecCCCeEEeeeCCcccceEEEEecC
Q psy14511         84 KAIAWCPWEPTLLATGGGICDQTVRLWNSM  113 (488)
Q Consensus        84 ~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~  113 (488)
                      ..+.+..++..++++..   -|.  +|.+.
T Consensus       179 i~v~~t~~nS~llt~D~---~Gs--f~~lv  203 (1206)
T KOG2079|consen  179 IFVGRTSQNSKLLTSDT---GGS--FWKLV  203 (1206)
T ss_pred             EEEEEeCCCcEEEEccC---CCc--eEEEE
Confidence            44455555554444332   343  67653

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=97.20  E-value=0.084  Score=46.23  Aligned_cols=202  Identities=11%  Similarity=0.054  Sum_probs=113.5

Q ss_pred             EEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe-c-CCEEEEeecCCeEEEEECcCCCccceeee--
Q psy14511        247 VAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW-N-GNLLSCGTIGGNILHYDVRTHSDYPTAIT--  322 (488)
Q Consensus       247 ~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--  322 (488)
                      ..|.++...|+...-..+.|.-|+..+++. ..+.. ...+.++.. + +..|+++. .| +++++.+.+.. ...+.  
T Consensus        30 P~w~~~~~~L~w~DI~~~~i~r~~~~~g~~-~~~~~-p~~~~~~~~~d~~g~Lv~~~-~g-~~~~~~~~~~~-~t~~~~~  104 (307)
T COG3386          30 PVWDPDRGALLWVDILGGRIHRLDPETGKK-RVFPS-PGGFSSGALIDAGGRLIACE-HG-VRLLDPDTGGK-ITLLAEP  104 (307)
T ss_pred             ccCcCCCCEEEEEeCCCCeEEEecCCcCce-EEEEC-CCCcccceeecCCCeEEEEc-cc-cEEEeccCCce-eEEeccc
Confidence            357788776666646778888888875432 22221 222233333 3 33444433 22 55566544332 11111  


Q ss_pred             --c-CCccEEEEEEccCCcEEEEEec------------CeEEEEECCCCCCCcccce-eee----eecCCCCEEEEEccC
Q psy14511        323 --R-EGDVVCGLKWSPNGRYLASGSN------------NTVKIWDFRQLDAKRPLGL-IVP----KLKREGRELVTSHGK  382 (488)
Q Consensus       323 --~-~~~~i~~~~~s~~~~~l~~~~d------------~~i~iwd~~~~~~~~~~~~-~~~----~~~~~~~~l~~~~g~  382 (488)
                        . .....+.+...|+|.+.++...            |.++.+|. .+...+.+.. +..    +||||++.++.+ -+
T Consensus       105 ~~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p-~g~~~~l~~~~~~~~NGla~SpDg~tly~a-DT  182 (307)
T COG3386         105 EDGLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDP-DGGVVRLLDDDLTIPNGLAFSPDGKTLYVA-DT  182 (307)
T ss_pred             cCCCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcC-CCCEEEeecCcEEecCceEECCCCCEEEEE-eC
Confidence              1 1134567888899987764322            43444443 3333333333 221    999999988886 55


Q ss_pred             CCCeEEEEeCCC--cce-----eEEEeeccccEEEEEEcCCCCEEEEEeCCC-cEEEEecCCCCcccccccc-CCcceEE
Q psy14511        383 QDCSLKMWEYPR--LHL-----IEELKIHQERILSAVLSPDQTCVAAASADE-TISIWNCFPRDKKRKARQV-GSGSSLE  453 (488)
Q Consensus       383 ~~~~i~i~d~~~--~~~-----~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg-~v~iw~~~~~~~~~~~~~~-~~v~~~~  453 (488)
                      ..+.|+-|++..  +..     ......+.+..-.++...+|.+.+++-.+| .|..|+.+ +++....... ..+++++
T Consensus       183 ~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G~l~~~i~lP~~~~t~~~  261 (307)
T COG3386         183 PANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-GKLLGEIKLPVKRPTNPA  261 (307)
T ss_pred             CCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC-CcEEEEEECCCCCCccce
Confidence            668888887752  211     111222344555677777888876555554 89999998 7766443333 7778888


Q ss_pred             eec
Q psy14511        454 FAI  456 (488)
Q Consensus       454 ~s~  456 (488)
                      |--
T Consensus       262 FgG  264 (307)
T COG3386         262 FGG  264 (307)
T ss_pred             EeC
Confidence            854

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=97.16  E-value=0.21  Score=46.48  Aligned_cols=70  Identities=19%  Similarity=0.189  Sum_probs=48.3

Q ss_pred             EEEEcCCCCEEEEEeCC-CcEEEEecCCCCcc----ccccccCCcceEEeecCCCceEEEE--------eeeccccccee
Q psy14511        410 SAVLSPDQTCVAAASAD-ETISIWNCFPRDKK----RKARQVGSGSSLEFAILKQPVSLTA--------LLRSRAVEKQQ  476 (488)
Q Consensus       410 ~~~~s~~~~~l~t~~~d-g~v~iw~~~~~~~~----~~~~~~~~v~~~~~s~~~~~~~~~~--------~~~~~~~~~~~  476 (488)
                      -++|.|..+.+|.+|.- +.|.||.+......    .......+...++|--|+..+++.+        ++.++.++.+.
T Consensus       343 liAfn~kaq~VAVASNTcn~ilVYSv~~s~mPniQqIqLe~~ERPKGiCFltdklLLilVGkqK~td~aFLPSS~sd~Y~  422 (671)
T PF15390_consen  343 LIAFNPKAQVVAVASNTCNIILVYSVTPSSMPNIQQIQLESNERPKGICFLTDKLLLILVGKQKSTDPAFLPSSKSDKYI  422 (671)
T ss_pred             eeeeCCcCCEEEEEecCCcEEEEEEeccccCCCeeEEEcccCCCCceeeEccCCeEEEEeccccCCCcccCCCCccccEE
Confidence            37999999999999976 57889998764432    2234456667788888777776644        55555666655


Q ss_pred             eEE
Q psy14511        477 HAI  479 (488)
Q Consensus       477 ~~i  479 (488)
                      +.+
T Consensus       423 irL  425 (671)
T PF15390_consen  423 IRL  425 (671)
T ss_pred             EEE
Confidence            544

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=97.09  E-value=0.0023  Score=37.54  Aligned_cols=33  Identities=12%  Similarity=0.245  Sum_probs=29.4

Q ss_pred             cccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCC
Q psy14511        405 QERILSAVLSPDQTCVAAASADETISIWNCFPRD  438 (488)
Q Consensus       405 ~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~  438 (488)
                      ...|..++|+|...+||.++.||.|.++.+ +++
T Consensus        11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~q   43 (47)
T PF12894_consen   11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQ   43 (47)
T ss_pred             CCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCc
Confidence            456999999999999999999999999999 444

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=97.05  E-value=0.22  Score=49.72  Aligned_cols=228  Identities=14%  Similarity=0.063  Sum_probs=119.0

Q ss_pred             CCcEEEEECCCeEEEEECCCCceEEEEecCCCCCC-----ceEEEEEcC----------------CCCeEEEEeCCCCcE
Q psy14511        208 YHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNA-----YISCVAWKP----------------RTTDLAVTNTCTEYI  266 (488)
Q Consensus       208 ~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~-----~i~~~~~~~----------------~~~~l~~~~~~~~~i  266 (488)
                      ++.+++++.++.|.-.|..+|+.+-.+........     ....+++..                .+..++++ +.|+.+
T Consensus       194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~-T~Dg~L  272 (764)
T TIGR03074       194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILP-TSDARL  272 (764)
T ss_pred             CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEe-cCCCeE
Confidence            56788888889999999999987766654321111     122233321                23477777 899999


Q ss_pred             EEEECCcceeeeeeccccccE----------------E-EEEecCCEEEEeec----------CCeEEEEECcCCCccce
Q psy14511        267 DLWHEQEERLIQKLRTHMHQV----------------I-AMCWNGNLLSCGTI----------GGNILHYDVRTHSDYPT  319 (488)
Q Consensus       267 ~i~d~~~~~~~~~~~~~~~~v----------------~-~~~~~~~~l~~~~~----------dg~i~i~d~~~~~~~~~  319 (488)
                      .-.|.++++.+..+.. .+.+                + .-...+..+++|+.          +|.|+-+|.++++..-.
T Consensus       273 iALDA~TGk~~W~fg~-~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W~  351 (764)
T TIGR03074       273 IALDADTGKLCEDFGN-NGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVWA  351 (764)
T ss_pred             EEEECCCCCEEEEecC-CCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCcEeeE
Confidence            9999999988876532 1111                1 11113455666642          68899999999864333


Q ss_pred             eeecCCccEEEEEEccCCcEEEEEe-c-CeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcce
Q psy14511        320 AITREGDVVCGLKWSPNGRYLASGS-N-NTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHL  397 (488)
Q Consensus       320 ~~~~~~~~i~~~~~s~~~~~l~~~~-d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~  397 (488)
                      ........ ...  -+.++....++ . -..--+|.+.+..--........+-...+....  ....+.|.-.|.++|+.
T Consensus       352 ~~~g~p~~-~~~--~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~~r~~~~--n~y~~slvALD~~TGk~  426 (764)
T TIGR03074       352 WDPGNPDP-TAP--PAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGGDRTPAD--EKYSSSLVALDATTGKE  426 (764)
T ss_pred             EecCCCCc-ccC--CCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccccccCCccccCc--ccccceEEEEeCCCCce
Confidence            32221110 000  01222221111 1 112222222211000000000000000000000  12345677788899988


Q ss_pred             eEEEeeccccEEE---------EEEcC-CCC---EEEEEeCCCcEEEEecCCCCcccc
Q psy14511        398 IEELKIHQERILS---------AVLSP-DQT---CVAAASADETISIWNCFPRDKKRK  442 (488)
Q Consensus       398 ~~~~~~~~~~v~~---------~~~s~-~~~---~l~t~~~dg~v~iw~~~~~~~~~~  442 (488)
                      .-.++.....+++         +.+.. +|+   .++.++.+|.+++.|-.+++.+..
T Consensus       427 ~W~~Q~~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~~  484 (764)
T TIGR03074       427 RWVFQTVHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIVP  484 (764)
T ss_pred             EEEecccCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEee
Confidence            8776642221221         22322 563   788999999999999999998743

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=97.05  E-value=0.15  Score=42.84  Aligned_cols=129  Identities=12%  Similarity=0.144  Sum_probs=76.0

Q ss_pred             CCcEEEEE-CCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccc--c
Q psy14511        208 YHDTLAVA-LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTH--M  284 (488)
Q Consensus       208 ~~~~~~~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~--~  284 (488)
                      ++.++--+ .++...+||..+-+....+..++    .=..++  .+++.|+.+ .....++.+|..+.+....+.-.  .
T Consensus        99 ~d~l~qLTWk~~~~f~yd~~tl~~~~~~~y~~----EGWGLt--~dg~~Li~S-DGS~~L~~~dP~~f~~~~~i~V~~~g  171 (264)
T PF05096_consen   99 GDKLYQLTWKEGTGFVYDPNTLKKIGTFPYPG----EGWGLT--SDGKRLIMS-DGSSRLYFLDPETFKEVRTIQVTDNG  171 (264)
T ss_dssp             TTEEEEEESSSSEEEEEETTTTEEEEEEE-SS----S--EEE--ECSSCEEEE--SSSEEEEE-TTT-SEEEEEE-EETT
T ss_pred             CCEEEEEEecCCeEEEEccccceEEEEEecCC----cceEEE--cCCCEEEEE-CCccceEEECCcccceEEEEEEEECC
Confidence            45666666 78899999999998888887653    344555  567788888 67778999998876665555321  1


Q ss_pred             ---ccEEEEEe-cCCEEEEeecCCeEEEEECcCCCccceee---------------ecCCccEEEEEEccCCcEEEEEe
Q psy14511        285 ---HQVIAMCW-NGNLLSCGTIGGNILHYDVRTHSDYPTAI---------------TREGDVVCGLKWSPNGRYLASGS  344 (488)
Q Consensus       285 ---~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~---------------~~~~~~i~~~~~s~~~~~l~~~~  344 (488)
                         ..++.+.+ +|...|=.-....|...|..++.. ...+               ....+-.+.+|+.|....|...+
T Consensus       172 ~pv~~LNELE~i~G~IyANVW~td~I~~Idp~tG~V-~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTG  249 (264)
T PF05096_consen  172 RPVSNLNELEYINGKIYANVWQTDRIVRIDPETGKV-VGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTG  249 (264)
T ss_dssp             EE---EEEEEEETTEEEEEETTSSEEEEEETTT-BE-EEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEE
T ss_pred             EECCCcEeEEEEcCEEEEEeCCCCeEEEEeCCCCeE-EEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEe
Confidence               23455666 555444444455566666666531 1110               11145579999998776555544

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>KOG4441|consensus

Probab=96.98  E-value=0.19  Score=48.66  Aligned_cols=213  Identities=17%  Similarity=0.151  Sum_probs=117.0

Q ss_pred             CeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCC------CcEEEEECCcceeee--eeccccccEEE
Q psy14511        218 TSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCT------EYIDLWHEQEERLIQ--KLRTHMHQVIA  289 (488)
Q Consensus       218 ~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~------~~i~i~d~~~~~~~~--~~~~~~~~v~~  289 (488)
                      ..+..||..+++......++.  ...-.+++... +...++| +.+      .++..||..+.+-..  .+.........
T Consensus       301 ~~ve~yd~~~~~w~~~a~m~~--~r~~~~~~~~~-~~lYv~G-G~~~~~~~l~~ve~YD~~~~~W~~~a~M~~~R~~~~v  376 (571)
T KOG4441|consen  301 RSVECYDPKTNEWSSLAPMPS--PRCRVGVAVLN-GKLYVVG-GYDSGSDRLSSVERYDPRTNQWTPVAPMNTKRSDFGV  376 (571)
T ss_pred             ceeEEecCCcCcEeecCCCCc--ccccccEEEEC-CEEEEEc-cccCCCcccceEEEecCCCCceeccCCccCcccccee
Confidence            468899999987777666653  22334444443 3444455 666      357788877755322  22223333344


Q ss_pred             EEecCCEEEEeecCC-----eEEEEECcCCCccceeeecCCccEEEE-EEccCCcEEEEEe-c------CeEEEEECCCC
Q psy14511        290 MCWNGNLLSCGTIGG-----NILHYDVRTHSDYPTAITREGDVVCGL-KWSPNGRYLASGS-N------NTVKIWDFRQL  356 (488)
Q Consensus       290 ~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~~i~~~-~~s~~~~~l~~~~-d------~~i~iwd~~~~  356 (488)
                      ...+|.+.++|+.||     ++..||..+.+  .............. ...-+|+..++|+ +      .++..||..+.
T Consensus       377 ~~l~g~iYavGG~dg~~~l~svE~YDp~~~~--W~~va~m~~~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~  454 (571)
T KOG4441|consen  377 AVLDGKLYAVGGFDGEKSLNSVECYDPVTNK--WTPVAPMLTRRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPETN  454 (571)
T ss_pred             EEECCEEEEEeccccccccccEEEecCCCCc--ccccCCCCcceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCCC
Confidence            444899999999986     47778887643  11111111111111 1223677777776 3      45788888765


Q ss_pred             CCC--ccccee---eeeecCCCCEEEEEccCCCC-----eEEEEeCCCcceeEE--EeeccccEEEEEEcCCCCEEEEEe
Q psy14511        357 DAK--RPLGLI---VPKLKREGRELVTSHGKQDC-----SLKMWEYPRLHLIEE--LKIHQERILSAVLSPDQTCVAAAS  424 (488)
Q Consensus       357 ~~~--~~~~~~---~~~~~~~~~~l~~~~g~~~~-----~i~i~d~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~t~~  424 (488)
                      .-.  .++...   ...-.-++...+.  |+.++     ++..||..+.+-...  .......+....+  +++..+.|+
T Consensus       455 ~W~~~~~M~~~R~~~g~a~~~~~iYvv--GG~~~~~~~~~VE~ydp~~~~W~~v~~m~~~rs~~g~~~~--~~~ly~vGG  530 (571)
T KOG4441|consen  455 TWTLIAPMNTRRSGFGVAVLNGKIYVV--GGFDGTSALSSVERYDPETNQWTMVAPMTSPRSAVGVVVL--GGKLYAVGG  530 (571)
T ss_pred             ceeecCCcccccccceEEEECCEEEEE--CCccCCCccceEEEEcCCCCceeEcccCccccccccEEEE--CCEEEEEec
Confidence            321  112111   1133345555555  55554     377888877553322  2222222222332  677888888


Q ss_pred             CCC-----cEEEEecCCCCcc
Q psy14511        425 ADE-----TISIWNCFPRDKK  440 (488)
Q Consensus       425 ~dg-----~v~iw~~~~~~~~  440 (488)
                      .||     +|..||..+.+-.
T Consensus       531 ~~~~~~l~~ve~ydp~~d~W~  551 (571)
T KOG4441|consen  531 FDGNNNLNTVECYDPETDTWT  551 (571)
T ss_pred             ccCccccceeEEcCCCCCcee
Confidence            885     5777776665543

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=96.88  E-value=0.087  Score=37.43  Aligned_cols=98  Identities=16%  Similarity=0.280  Sum_probs=60.9

Q ss_pred             eEEEEEcC---CC-CeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe-cCCEEEEeecCCeEEEEECcCCCccc
Q psy14511        244 ISCVAWKP---RT-TDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW-NGNLLSCGTIGGNILHYDVRTHSDYP  318 (488)
Q Consensus       244 i~~~~~~~---~~-~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~  318 (488)
                      |+++++..   +| +.|+++ +.|..|++|+-.  ..+..+.. ...+.++.. .+..++.+-.+|+|-+|+-..  ...
T Consensus         2 V~al~~~d~d~dg~~eLlvG-s~D~~IRvf~~~--e~~~Ei~e-~~~v~~L~~~~~~~F~Y~l~NGTVGvY~~~~--RlW   75 (111)
T PF14783_consen    2 VTALCLFDFDGDGENELLVG-SDDFEIRVFKGD--EIVAEITE-TDKVTSLCSLGGGRFAYALANGTVGVYDRSQ--RLW   75 (111)
T ss_pred             eeEEEEEecCCCCcceEEEe-cCCcEEEEEeCC--cEEEEEec-ccceEEEEEcCCCEEEEEecCCEEEEEeCcc--eee
Confidence            45555543   33 567778 999999999854  45666654 456666666 678899999999999998643  223


Q ss_pred             eeeecCCccEEEEEE-ccCC---cEEEEEe-cCeEE
Q psy14511        319 TAITREGDVVCGLKW-SPNG---RYLASGS-NNTVK  349 (488)
Q Consensus       319 ~~~~~~~~~i~~~~~-s~~~---~~l~~~~-d~~i~  349 (488)
                      +....+.  +.++++ ..++   .-|++|- +|.|.
T Consensus        76 RiKSK~~--~~~~~~~D~~gdG~~eLI~GwsnGkve  109 (111)
T PF14783_consen   76 RIKSKNQ--VTSMAFYDINGDGVPELIVGWSNGKVE  109 (111)
T ss_pred             eeccCCC--eEEEEEEcCCCCCceEEEEEecCCeEE
Confidence            3222232  444544 3333   2444443 46654

>COG5276 Uncharacterized conserved protein [Function unknown]

Probab=96.88  E-value=0.22  Score=42.00  Aligned_cols=148  Identities=12%  Similarity=0.035  Sum_probs=98.2

Q ss_pred             eeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcc---eeeeee
Q psy14511        204 LDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEE---RLIQKL  280 (488)
Q Consensus       204 ~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~---~~~~~~  280 (488)
                      +.++.+..+.+-.+.-+++.|+.+........... ..+.-.++..  .|++..++ ..+.-+.+.|+.+.   +...++
T Consensus        92 v~vse~yvyvad~ssGL~IvDIS~P~sP~~~~~ln-t~gyaygv~v--sGn~aYVa-dlddgfLivdvsdpssP~lagry  167 (370)
T COG5276          92 VRVSEEYVYVADWSSGLRIVDISTPDSPTLIGFLN-TDGYAYGVYV--SGNYAYVA-DLDDGFLIVDVSDPSSPQLAGRY  167 (370)
T ss_pred             eEecccEEEEEcCCCceEEEeccCCCCcceecccc-CCceEEEEEe--cCCEEEEe-eccCcEEEEECCCCCCceeeeee
Confidence            44556777777788999999999877555544432 2344455555  57888888 65666778887654   344455


Q ss_pred             ccccccEEEEEecCCEEEEeecCCeEEEEECcCCCccceeeecCCc-cEEEEEEccCCcEEEEEecCeEEEEECCCC
Q psy14511        281 RTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGD-VVCGLKWSPNGRYLASGSNNTVKIWDFRQL  356 (488)
Q Consensus       281 ~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~  356 (488)
                      .........+...|++-..+..|+-+.+-|+.++..+...-....+ .+.++..+++.-+++.... .+.+-|....
T Consensus       168 a~~~~d~~~v~ISGn~AYvA~~d~GL~ivDVSnp~sPvli~~~n~g~g~~sv~vsdnr~y~vvy~e-gvlivd~s~~  243 (370)
T COG5276         168 ALPGGDTHDVAISGNYAYVAWRDGGLTIVDVSNPHSPVLIGSYNTGPGTYSVSVSDNRAYLVVYDE-GVLIVDVSGP  243 (370)
T ss_pred             ccCCCCceeEEEecCeEEEEEeCCCeEEEEccCCCCCeEEEEEecCCceEEEEecCCeeEEEEccc-ceEEEecCCC
Confidence            5555555677888999999999999999999987655444333333 6778888877666654433 3344444443

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=96.85  E-value=0.37  Score=44.20  Aligned_cols=257  Identities=17%  Similarity=0.144  Sum_probs=148.4

Q ss_pred             EEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec--CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCe
Q psy14511         17 ILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPT   94 (488)
Q Consensus        17 i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~--d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~   94 (488)
                      +.+++..+.... ..+.-+. ....+...|++..+....  ...+.+-+... .....  ....-...-..++.++++..
T Consensus        13 ~~v~~~~~~~~~-~~~~~~~-~~~~v~~~~~g~~~~v~~~~~~~~~~~~~~~-n~~~~--~~~~g~~~p~~i~v~~~~~~   87 (381)
T COG3391          13 VSVINTGTNKVT-AAISLGR-GPGGVAVNPDGTQVYVANSGSNDVSVIDATS-NTVTQ--SLSVGGVYPAGVAVNPAGNK   87 (381)
T ss_pred             eEEEeecccEEE-EEeecCC-CCceeEEcCccCEEEEEeecCceeeeccccc-ceeee--eccCCCccccceeeCCCCCe
Confidence            666665554422 2222222 456678888886555443  23444444331 11111  01101133457788888887


Q ss_pred             EEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecc
Q psy14511         95 LLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRT  174 (488)
Q Consensus        95 l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (488)
                      +++....  ++.+.+.|..+.+.......... ...                                            
T Consensus        88 vyv~~~~--~~~v~vid~~~~~~~~~~~vG~~-P~~--------------------------------------------  120 (381)
T COG3391          88 VYVTTGD--SNTVSVIDTATNTVLGSIPVGLG-PVG--------------------------------------------  120 (381)
T ss_pred             EEEecCC--CCeEEEEcCcccceeeEeeeccC-Cce--------------------------------------------
Confidence            7777763  78999999766665544433311 000                                            


Q ss_pred             cccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEEC---CCeEEEEECCCCceEEEEecCCCCCCceEEEEEcC
Q psy14511        175 LGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVAL---DTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKP  251 (488)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~  251 (488)
                                                 ..+++..+.++++..   ++.+.+.|..+++.......   ...+ ..++++|
T Consensus       121 ---------------------------~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~v---G~~P-~~~a~~p  169 (381)
T COG3391         121 ---------------------------LAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPV---GNTP-TGVAVDP  169 (381)
T ss_pred             ---------------------------EEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEec---CCCc-ceEEECC
Confidence                                       012222344555443   68899999998887777332   2223 8999999


Q ss_pred             CCCeEEEEeCCCCcEEEEECCcceeee-e----ecccc-ccEEEEEecCCEEEEeecC---CeEEEEECcCCCccceeee
Q psy14511        252 RTTDLAVTNTCTEYIDLWHEQEERLIQ-K----LRTHM-HQVIAMCWNGNLLSCGTIG---GNILHYDVRTHSDYPTAIT  322 (488)
Q Consensus       252 ~~~~l~~~~~~~~~i~i~d~~~~~~~~-~----~~~~~-~~v~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~  322 (488)
                      +|+.+++....++.|.+.|.......+ .    ..... .....+..+++.+......   +.+...|..+.........
T Consensus       170 ~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~~~~  249 (381)
T COG3391         170 DGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTATDLP  249 (381)
T ss_pred             CCCeEEEEecCCCeEEEEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEeccc
Confidence            999888885679999999977654443 1    11111 2233444477755554433   5888888877542222111


Q ss_pred             cCCccEEEEEEccCCcEEEEEe-c-CeEEEEECCCC
Q psy14511        323 REGDVVCGLKWSPNGRYLASGS-N-NTVKIWDFRQL  356 (488)
Q Consensus       323 ~~~~~i~~~~~s~~~~~l~~~~-d-~~i~iwd~~~~  356 (488)
                      ........+..+|+|+.+.+.. . +.+.+.|..+.
T Consensus       250 ~~~~~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~  285 (381)
T COG3391         250 VGSGAPRGVAVDPAGKAAYVANSQGGTVSVIDGATD  285 (381)
T ss_pred             cccCCCCceeECCCCCEEEEEecCCCeEEEEeCCCC
Confidence            1111345688999999888886 3 78888887665

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.79  E-value=0.27  Score=41.62  Aligned_cols=133  Identities=13%  Similarity=0.184  Sum_probs=84.7

Q ss_pred             EEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccc-cccEEEEEe--cCCE
Q psy14511        220 VYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTH-MHQVIAMCW--NGNL  296 (488)
Q Consensus       220 v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~-~~~v~~~~~--~~~~  296 (488)
                      ..+|...-.......+..+ ....+.++.|+|+.+.|++. .....-.++=...|+.++++.-. -...-.+.+  +|++
T Consensus        65 ~~~~l~~y~~~i~akpi~g-~~~nvS~LTynp~~rtLFav-~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~f  142 (316)
T COG3204          65 IARYLLEYRARIDAKPILG-ETANVSSLTYNPDTRTLFAV-TNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQF  142 (316)
T ss_pred             hhhccCCceEEEecccccc-ccccccceeeCCCcceEEEe-cCCCceEEEEecCCceEEEecccccCChhHeEEecCCEE
Confidence            3444433332223333344 45569999999999999998 66666666666677888776531 223345566  5666


Q ss_pred             EEEeecCCeEEEEECcCCCccc---------eeeecCCccEEEEEEccCCcEEEEEec-CeEEEEECC
Q psy14511        297 LSCGTIGGNILHYDVRTHSDYP---------TAITREGDVVCGLKWSPNGRYLASGSN-NTVKIWDFR  354 (488)
Q Consensus       297 l~~~~~dg~i~i~d~~~~~~~~---------~~~~~~~~~i~~~~~s~~~~~l~~~~d-~~i~iwd~~  354 (488)
                      +++--.++.++++.+.......         ......+.....++|+|..+.|..+-+ +-+.||...
T Consensus       143 vi~dER~~~l~~~~vd~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~  210 (316)
T COG3204         143 VIVDERDRALYLFTVDADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVT  210 (316)
T ss_pred             EEEehhcceEEEEEEcCCccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEe
Confidence            6666677888888776543211         111222556789999999998888885 666666665

>KOG2377|consensus

Probab=96.73  E-value=0.25  Score=44.37  Aligned_cols=145  Identities=15%  Similarity=0.208  Sum_probs=96.0

Q ss_pred             CcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceee----eeecccc
Q psy14511        209 HDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLI----QKLRTHM  284 (488)
Q Consensus       209 ~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~----~~~~~~~  284 (488)
                      ++.+.+...|.+.-|-......-....+.....++|.++.|++|.+.+++- -.+..|.+++....+..    .+.+...
T Consensus        34 NkqlfavrSggatgvvvkgpndDVpiSfdm~d~G~I~SIkFSlDnkilAVQ-R~~~~v~f~nf~~d~~~l~~~~~ck~k~  112 (657)
T KOG2377|consen   34 NKQLFAVRSGGATGVVVKGPNDDVPISFDMDDKGEIKSIKFSLDNKILAVQ-RTSKTVDFCNFIPDNSQLEYTQECKTKN  112 (657)
T ss_pred             cceEEEEecCCeeEEEEeCCCCCCCceeeecCCCceeEEEeccCcceEEEE-ecCceEEEEecCCCchhhHHHHHhccCc
Confidence            556666666666666655433211222222256799999999999999999 89999999987543322    2223445


Q ss_pred             ccEEEEEe-cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe--c-CeEEEEECCC
Q psy14511        285 HQVIAMCW-NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--N-NTVKIWDFRQ  355 (488)
Q Consensus       285 ~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--d-~~i~iwd~~~  355 (488)
                      ..|..+.| +..-++.....| +.+|-....+..++....|+-.|+-..|.|+.+.+..++  . +.+.=+.+++
T Consensus       113 ~~IlGF~W~~s~e~A~i~~~G-~e~y~v~pekrslRlVks~~~nvnWy~yc~et~v~LL~t~~~~n~lnpf~~~~  186 (657)
T KOG2377|consen  113 ANILGFCWTSSTEIAFITDQG-IEFYQVLPEKRSLRLVKSHNLNVNWYMYCPETAVILLSTTVLENVLNPFHFRA  186 (657)
T ss_pred             ceeEEEEEecCeeEEEEecCC-eEEEEEchhhhhhhhhhhcccCccEEEEccccceEeeeccccccccccEEEee
Confidence            56888999 667777766655 677776665566777777888888888999887655444  2 4444444443

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=96.66  E-value=0.33  Score=40.92  Aligned_cols=118  Identities=12%  Similarity=0.024  Sum_probs=78.3

Q ss_pred             CCccccceeeeeee-CCCcEEEEE---CCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEE
Q psy14511        193 PSIINDFYTSGLDW-GYHDTLAVA---LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDL  268 (488)
Q Consensus       193 ~~~~~~~~~~~~~~-~~~~~~~~~---~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i  268 (488)
                      .......+...+.+ .++.++-++   ....|+.+|+.+++......++.  ...--.++...+ +....+ -.++...+
T Consensus        39 ypHd~~aFTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~--~~FgEGit~~~d-~l~qLT-Wk~~~~f~  114 (264)
T PF05096_consen   39 YPHDPTAFTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPP--RYFGEGITILGD-KLYQLT-WKEGTGFV  114 (264)
T ss_dssp             EE--TT-EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TT--T--EEEEEEETT-EEEEEE-SSSSEEEE
T ss_pred             CCCCCcccCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCc--cccceeEEEECC-EEEEEE-ecCCeEEE
Confidence            33444556667777 566666555   34589999999999888877763  334445665544 344445 68999999


Q ss_pred             EECCcceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCC
Q psy14511        269 WHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHS  315 (488)
Q Consensus       269 ~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~  315 (488)
                      ||..+.+.+.++. ..+.-..++.+++.|+.......++++|..+-+
T Consensus       115 yd~~tl~~~~~~~-y~~EGWGLt~dg~~Li~SDGS~~L~~~dP~~f~  160 (264)
T PF05096_consen  115 YDPNTLKKIGTFP-YPGEGWGLTSDGKRLIMSDGSSRLYFLDPETFK  160 (264)
T ss_dssp             EETTTTEEEEEEE--SSS--EEEECSSCEEEE-SSSEEEEE-TTT-S
T ss_pred             EccccceEEEEEe-cCCcceEEEcCCCEEEEECCccceEEECCcccc
Confidence            9999988888775 345778888999888888888899999987643

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=96.63  E-value=0.14  Score=36.39  Aligned_cols=89  Identities=11%  Similarity=0.200  Sum_probs=61.5

Q ss_pred             CcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEE
Q psy14511        209 HDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVI  288 (488)
Q Consensus       209 ~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~  288 (488)
                      +.+++++.|..|++|+-+  +....+.    ....+++++-... ..++.+ ..+|+|-+|+..  ..+...+... .+.
T Consensus        16 ~eLlvGs~D~~IRvf~~~--e~~~Ei~----e~~~v~~L~~~~~-~~F~Y~-l~NGTVGvY~~~--~RlWRiKSK~-~~~   84 (111)
T PF14783_consen   16 NELLVGSDDFEIRVFKGD--EIVAEIT----ETDKVTSLCSLGG-GRFAYA-LANGTVGVYDRS--QRLWRIKSKN-QVT   84 (111)
T ss_pred             ceEEEecCCcEEEEEeCC--cEEEEEe----cccceEEEEEcCC-CEEEEE-ecCCEEEEEeCc--ceeeeeccCC-CeE
Confidence            689999999999999865  3333333    4567888887766 467777 899999999863  3344444333 355


Q ss_pred             EEEe-c----C-CEEEEeecCCeEEE
Q psy14511        289 AMCW-N----G-NLLSCGTIGGNILH  308 (488)
Q Consensus       289 ~~~~-~----~-~~l~~~~~dg~i~i  308 (488)
                      ++.+ |    | ..|++|-.+|.|-+
T Consensus        85 ~~~~~D~~gdG~~eLI~GwsnGkve~  110 (111)
T PF14783_consen   85 SMAFYDINGDGVPELIVGWSNGKVEV  110 (111)
T ss_pred             EEEEEcCCCCCceEEEEEecCCeEEe
Confidence            6555 3    2 47888888887753

>KOG2079|consensus

Probab=96.55  E-value=0.0096  Score=58.59  Aligned_cols=98  Identities=12%  Similarity=0.189  Sum_probs=73.2

Q ss_pred             CcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEE
Q psy14511        209 HDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVI  288 (488)
Q Consensus       209 ~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~  288 (488)
                      .-+++++..|.+...|....-.. ...... ..++|++++|+.+|+.++.| -.+|.|.+||+..++..+.+..|..+..
T Consensus       100 ~~ivi~Ts~ghvl~~d~~~nL~~-~~~ne~-v~~~Vtsvafn~dg~~l~~G-~~~G~V~v~D~~~~k~l~~i~e~~ap~t  176 (1206)
T KOG2079|consen  100 VPIVIGTSHGHVLLSDMTGNLGP-LHQNER-VQGPVTSVAFNQDGSLLLAG-LGDGHVTVWDMHRAKILKVITEHGAPVT  176 (1206)
T ss_pred             eeEEEEcCchhhhhhhhhcccch-hhcCCc-cCCcceeeEecCCCceeccc-cCCCcEEEEEccCCcceeeeeecCCccc
Confidence            34666678888888887664221 222222 67899999999999999998 9999999999999999999888777766


Q ss_pred             EEEe-----cCCEEEEeecCCeEEEEEC
Q psy14511        289 AMCW-----NGNLLSCGTIGGNILHYDV  311 (488)
Q Consensus       289 ~~~~-----~~~~l~~~~~dg~i~i~d~  311 (488)
                      .+-+     ++..++++...|.  +|.+
T Consensus       177 ~vi~v~~t~~nS~llt~D~~Gs--f~~l  202 (1206)
T KOG2079|consen  177 GVIFVGRTSQNSKLLTSDTGGS--FWKL  202 (1206)
T ss_pred             eEEEEEEeCCCcEEEEccCCCc--eEEE
Confidence            6555     3456888877776  5544

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=96.53  E-value=0.44  Score=40.81  Aligned_cols=108  Identities=11%  Similarity=0.058  Sum_probs=61.3

Q ss_pred             ccCCceEEEee-cCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEe-ccccCcCCCcccccc
Q psy14511          2 CWNGNLLSCGT-IGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWD-FRQLDAKRPQVNNQC   78 (488)
Q Consensus         2 ~~dg~~la~g~-~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd-~~~~~~~~~~~~~~~   78 (488)
                      +.||+.+|.-. .++.-.||-...+......+.+.  .+....|++++...+... +...+++. ..++...........
T Consensus        32 S~dg~~~A~v~~~~~~~~L~~~~~~~~~~~~~~g~--~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~~~~v~~~~  109 (253)
T PF10647_consen   32 SPDGSRVAAVSEGDGGRSLYVGPAGGPVRPVLTGG--SLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGEPVEVDWPG  109 (253)
T ss_pred             CCCCCeEEEEEEcCCCCEEEEEcCCCcceeeccCC--ccccccccCCCCEEEEEcCCCceEEEEecCCCcceeEEecccc
Confidence            45787776544 23333444444444333334343  688999999988777765 56666663 233322221111221


Q ss_pred             cccceeEEEEecCCCeEEeeeCCcccceEEEEe
Q psy14511         79 HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWN  111 (488)
Q Consensus        79 h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd  111 (488)
                      -.+.|..+.+||||..++.......++.|.+=-
T Consensus       110 ~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~  142 (253)
T PF10647_consen  110 LRGRITALRVSPDGTRVAVVVEDGGGGRVYVAG  142 (253)
T ss_pred             cCCceEEEEECCCCcEEEEEEecCCCCeEEEEE
Confidence            222899999999999988877421244444443

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=96.51  E-value=0.0085  Score=35.14  Aligned_cols=30  Identities=20%  Similarity=0.491  Sum_probs=27.1

Q ss_pred             CceEEEEEEccCCcEEEEec-CCeEEEEecc
Q psy14511         36 GDVVCGLKWSPNGRYLASGS-NNTVKIWDFR   65 (488)
Q Consensus        36 ~~~V~~l~~sp~g~~las~~-d~~i~vwd~~   65 (488)
                      ...|.+++|+|...+||.+. +|.|.++.++
T Consensus        11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~   41 (47)
T PF12894_consen   11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRLN   41 (47)
T ss_pred             CCcEEEEEECCCCCEEEEEECCCeEEEEECC
Confidence            34699999999999999998 9999999984

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=96.48  E-value=0.67  Score=42.39  Aligned_cols=75  Identities=11%  Similarity=0.029  Sum_probs=53.2

Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe----cCC-----------------EEE
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW----NGN-----------------LLS  298 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~----~~~-----------------~l~  298 (488)
                      ....+.+++.+|.+++.+++ ..-|.|.++|+.++..++.+++....-...-.    ..+                 +++
T Consensus       306 ~~R~~~~i~~sP~~~laA~t-DslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~LvI  384 (415)
T PF14655_consen  306 SKREGESICLSPSGRLAAVT-DSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFALFLVI  384 (415)
T ss_pred             CCceEEEEEECCCCCEEEEE-cCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcceEEEEE
Confidence            34568899999999988888 99999999999998888877764433222111    111                 233


Q ss_pred             EeecCCeEEEEECcCCC
Q psy14511        299 CGTIGGNILHYDVRTHS  315 (488)
Q Consensus       299 ~~~~dg~i~i~d~~~~~  315 (488)
                      -+-..|.|.+|.++.+.
T Consensus       385 yaprRg~lEvW~~~~g~  401 (415)
T PF14655_consen  385 YAPRRGILEVWSMRQGP  401 (415)
T ss_pred             EeccCCeEEEEecCCCC
Confidence            45667889999988764

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=96.39  E-value=0.6  Score=40.78  Aligned_cols=221  Identities=9%  Similarity=0.042  Sum_probs=96.8

Q ss_pred             eeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeee-ee
Q psy14511        202 SGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQ-KL  280 (488)
Q Consensus       202 ~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~-~~  280 (488)
                      ..+.+.++..++++..+.| +...+.++.=..+.+..........+....++...+++  ..|.|.. ..+.++.-. ..
T Consensus        65 ~~I~f~~~~g~ivG~~g~l-l~T~DgG~tW~~v~l~~~lpgs~~~i~~l~~~~~~l~~--~~G~iy~-T~DgG~tW~~~~  140 (302)
T PF14870_consen   65 NSISFDGNEGWIVGEPGLL-LHTTDGGKTWERVPLSSKLPGSPFGITALGDGSAELAG--DRGAIYR-TTDGGKTWQAVV  140 (302)
T ss_dssp             EEEEEETTEEEEEEETTEE-EEESSTTSS-EE----TT-SS-EEEEEEEETTEEEEEE--TT--EEE-ESSTTSSEEEEE
T ss_pred             EEEEecCCceEEEcCCceE-EEecCCCCCcEEeecCCCCCCCeeEEEEcCCCcEEEEc--CCCcEEE-eCCCCCCeeEcc
Confidence            3344445556666665543 33333444322222211022233334433444334443  4454432 222332222 22


Q ss_pred             ccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEEC-CCCC
Q psy14511        281 RTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDF-RQLD  357 (488)
Q Consensus       281 ~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~-~~~~  357 (488)
                      ..-.+.+..+..  +|++++++.......-||.-.. .-..........|..|.|.|++.+.+.+..|.|+.=+. ...+
T Consensus       141 ~~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~-~w~~~~r~~~~riq~~gf~~~~~lw~~~~Gg~~~~s~~~~~~~  219 (302)
T PF14870_consen  141 SETSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQT-TWQPHNRNSSRRIQSMGFSPDGNLWMLARGGQIQFSDDPDDGE  219 (302)
T ss_dssp             -S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-S-S-EEEE--SSS-EEEEEE-TTS-EEEEETTTEEEEEE-TTEEE
T ss_pred             cCCcceeEeEEECCCCcEEEEECcccEEEEecCCCc-cceEEccCccceehhceecCCCCEEEEeCCcEEEEccCCCCcc
Confidence            333456666665  6787777766555567775432 12223333467799999999998877776688887772 1111


Q ss_pred             C-C--------cccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEe---eccccEEEEEEcCCCCEEEEEeC
Q psy14511        358 A-K--------RPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELK---IHQERILSAVLSPDQTCVAAASA  425 (488)
Q Consensus       358 ~-~--------~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~t~~~  425 (488)
                      . .        .-...+-.+|.+++...++  |. .|.+ +.....|+.=+.-+   .-....+.+.|.++.+-++. +.
T Consensus       220 ~w~~~~~~~~~~~~~~ld~a~~~~~~~wa~--gg-~G~l-~~S~DgGktW~~~~~~~~~~~n~~~i~f~~~~~gf~l-G~  294 (302)
T PF14870_consen  220 TWSEPIIPIKTNGYGILDLAYRPPNEIWAV--GG-SGTL-LVSTDGGKTWQKDRVGENVPSNLYRIVFVNPDKGFVL-GQ  294 (302)
T ss_dssp             EE---B-TTSS--S-EEEEEESSSS-EEEE--ES-TT-E-EEESSTTSS-EE-GGGTTSSS---EEEEEETTEEEEE--S
T ss_pred             ccccccCCcccCceeeEEEEecCCCCEEEE--eC-CccE-EEeCCCCccceECccccCCCCceEEEEEcCCCceEEE-CC
Confidence            1 0        0111122388888777776  33 3333 33334444333322   22446888999766555544 47


Q ss_pred             CCcEEEE
Q psy14511        426 DETISIW  432 (488)
Q Consensus       426 dg~v~iw  432 (488)
                      +|.|.-|
T Consensus       295 ~G~ll~~  301 (302)
T PF14870_consen  295 DGVLLRY  301 (302)
T ss_dssp             TTEEEEE
T ss_pred             CcEEEEe
Confidence            8877655

>PHA02713 hypothetical protein; Provisional

Probab=96.38  E-value=0.41  Score=46.43  Aligned_cols=93  Identities=13%  Similarity=0.112  Sum_probs=56.0

Q ss_pred             CeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCC------CcEEEEECCc-c--eeeeeeccccccEE
Q psy14511        218 TSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCT------EYIDLWHEQE-E--RLIQKLRTHMHQVI  288 (488)
Q Consensus       218 ~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~------~~i~i~d~~~-~--~~~~~~~~~~~~v~  288 (488)
                      ..+..||..+++......++. ..... +++ .-+++..++| +.+      ..+..||..+ .  ..+..+........
T Consensus       432 ~~ve~YDP~td~W~~v~~m~~-~r~~~-~~~-~~~~~IYv~G-G~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~  507 (557)
T PHA02713        432 NKVIRYDTVNNIWETLPNFWT-GTIRP-GVV-SHKDDIYVVC-DIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALH  507 (557)
T ss_pred             ceEEEECCCCCeEeecCCCCc-ccccC-cEE-EECCEEEEEe-CCCCCCccceeEEEecCCCCCCeeEccccCcccccce
Confidence            458889998887765554432 11122 222 2245555555 443      2467888876 3  33344444444455


Q ss_pred             EEEecCCEEEEeecCC--eEEEEECcCC
Q psy14511        289 AMCWNGNLLSCGTIGG--NILHYDVRTH  314 (488)
Q Consensus       289 ~~~~~~~~l~~~~~dg--~i~i~d~~~~  314 (488)
                      ....+++..++|+.++  .+..||..+.
T Consensus       508 ~~~~~~~iyv~Gg~~~~~~~e~yd~~~~  535 (557)
T PHA02713        508 TILHDNTIMMLHCYESYMLQDTFNVYTY  535 (557)
T ss_pred             eEEECCEEEEEeeecceeehhhcCcccc
Confidence            5556899999999888  6777887765

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=96.35  E-value=0.36  Score=44.99  Aligned_cols=143  Identities=17%  Similarity=0.272  Sum_probs=85.1

Q ss_pred             cccEEEEEe-cCCEEEEee---cCCeEEEEECcCCCccceeeecCCccEEEEEEccCC-----cEEEEEecCeEEEEECC
Q psy14511        284 MHQVIAMCW-NGNLLSCGT---IGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNG-----RYLASGSNNTVKIWDFR  354 (488)
Q Consensus       284 ~~~v~~~~~-~~~~l~~~~---~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~-----~~l~~~~d~~i~iwd~~  354 (488)
                      -.++..++| ||+.++-..   .+|.+++=|-        ...+.-..|..+.|.|-+     .+||+-....|.+|.+.
T Consensus        19 iHPvhGlaWTDGkqVvLT~L~l~~gE~kfGds--------~viGqFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~   90 (671)
T PF15390_consen   19 IHPVHGLAWTDGKQVVLTDLQLHNGEPKFGDS--------KVIGQFEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLC   90 (671)
T ss_pred             hccccceEecCCCEEEEEeeeeeCCccccCCc--------cEeeccceeeeeeecCcccCCCCceEEEeccceEEEEEec
Confidence            357889999 887655432   2333332221        122333458999999953     46666667999999986


Q ss_pred             C--CCCCcccc-----------ee--eeeecCCCCEEEEEccCCCCeEEEEeCC--CcceeEEEeeccccEEEEEEcCCC
Q psy14511        355 Q--LDAKRPLG-----------LI--VPKLKREGRELVTSHGKQDCSLKMWEYP--RLHLIEELKIHQERILSAVLSPDQ  417 (488)
Q Consensus       355 ~--~~~~~~~~-----------~~--~~~~~~~~~~l~~~~g~~~~~i~i~d~~--~~~~~~~~~~~~~~v~~~~~s~~~  417 (488)
                      .  .+..+.+.           ..  -+.|+|....|++.++. |- -.+++++  +.+....+. ..+.|.+.+|.+||
T Consensus        91 ~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~-dv-SV~~sV~~d~srVkaDi~-~~G~IhCACWT~DG  167 (671)
T PF15390_consen   91 PSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTAR-DV-SVLPSVHCDSSRVKADIK-TSGLIHCACWTKDG  167 (671)
T ss_pred             cCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecC-ce-eEeeeeeeCCceEEEecc-CCceEEEEEecCcC
Confidence            2  22222211           11  12899999999886432 21 2233443  223333443 45779999999999


Q ss_pred             CEEEEEeC-CCcEEEEecCCC
Q psy14511        418 TCVAAASA-DETISIWNCFPR  437 (488)
Q Consensus       418 ~~l~t~~~-dg~v~iw~~~~~  437 (488)
                      +.|+.+-. .=.-++||-...
T Consensus       168 ~RLVVAvGSsLHSyiWd~~qK  188 (671)
T PF15390_consen  168 QRLVVAVGSSLHSYIWDSAQK  188 (671)
T ss_pred             CEEEEEeCCeEEEEEecCchh
Confidence            98876543 334678886544

>PRK10115 protease 2; Provisional

Probab=96.34  E-value=1.3  Score=44.20  Aligned_cols=74  Identities=8%  Similarity=0.030  Sum_probs=48.8

Q ss_pred             ceEEEEEEccCCcEEEEec------CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCc---ccceE
Q psy14511         37 DVVCGLKWSPNGRYLASGS------NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGI---CDQTV  107 (488)
Q Consensus        37 ~~V~~l~~sp~g~~las~~------d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~---~d~~i  107 (488)
                      -.+..+.+||||++||.+.      ...|++-|+.++.....  .+. ...  ..++|++|++.++.+....   ....+
T Consensus       127 ~~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~--~i~-~~~--~~~~w~~D~~~~~y~~~~~~~~~~~~v  201 (686)
T PRK10115        127 YTLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPE--LLD-NVE--PSFVWANDSWTFYYVRKHPVTLLPYQV  201 (686)
T ss_pred             EEEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCc--ccc-Ccc--eEEEEeeCCCEEEEEEecCCCCCCCEE
Confidence            3577889999999999874      24788999987642111  111 111  4699999999888776420   12456


Q ss_pred             EEEecCCC
Q psy14511        108 RLWNSMNG  115 (488)
Q Consensus       108 ~vwd~~~~  115 (488)
                      ..+++.++
T Consensus       202 ~~h~lgt~  209 (686)
T PRK10115        202 WRHTIGTP  209 (686)
T ss_pred             EEEECCCC
Confidence            67777666

>KOG2395|consensus

Probab=96.32  E-value=0.068  Score=48.66  Aligned_cols=147  Identities=7%  Similarity=0.122  Sum_probs=85.1

Q ss_pred             EEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccc-cEEEEEec-------CCEEEEeecCCeEEEEECcCCCcc-c
Q psy14511        248 AWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMH-QVIAMCWN-------GNLLSCGTIGGNILHYDVRTHSDY-P  318 (488)
Q Consensus       248 ~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~-~v~~~~~~-------~~~l~~~~~dg~i~i~d~~~~~~~-~  318 (488)
                      -...+.+.|+..+.....++-.|++.|+.+..+..+.. ++..+..+       ...-+.|-.+..|.-||.+-.... +
T Consensus       340 L~~~dsnlil~~~~~~~~l~klDIE~GKIVeEWk~~~di~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl  419 (644)
T KOG2395|consen  340 LHRADSNLILMDGGEQDKLYKLDIERGKIVEEWKFEDDINMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKL  419 (644)
T ss_pred             hhccccceEeeCCCCcCcceeeecccceeeeEeeccCCcceeeccCCcchhcccccccEEeecCCceEEecccccCccee
Confidence            33445566666656677788889999999998887666 33333332       222344556777888888743321 1


Q ss_pred             eeeecCC----ccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCC
Q psy14511        319 TAITREG----DVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPR  394 (488)
Q Consensus       319 ~~~~~~~----~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~  394 (488)
                      .....|.    ....|.+-..+|                                     ++++  |+.+|.|++||- .
T Consensus       420 ~~~q~kqy~~k~nFsc~aTT~sG-------------------------------------~Ivv--gS~~GdIRLYdr-i  459 (644)
T KOG2395|consen  420 AVVQSKQYSTKNNFSCFATTESG-------------------------------------YIVV--GSLKGDIRLYDR-I  459 (644)
T ss_pred             eeeeccccccccccceeeecCCc-------------------------------------eEEE--eecCCcEEeehh-h
Confidence            1111111    111222222222                                     2233  566666666665 3


Q ss_pred             cc-eeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecC
Q psy14511        395 LH-LIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCF  435 (488)
Q Consensus       395 ~~-~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~  435 (488)
                      +. ....+++-..+|..+..+.||++++..+ +..+.+-++.
T Consensus       460 ~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc-~tyLlLi~t~  500 (644)
T KOG2395|consen  460 GRRAKTALPGLGDAIKHVDVTADGKWILATC-KTYLLLIDTL  500 (644)
T ss_pred             hhhhhhcccccCCceeeEEeeccCcEEEEec-ccEEEEEEEe
Confidence            32 2335677788999999999999887665 4456666553

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=96.32  E-value=0.59  Score=40.00  Aligned_cols=167  Identities=11%  Similarity=0.059  Sum_probs=89.6

Q ss_pred             CceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEE-CcCCCccc
Q psy14511        242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYD-VRTHSDYP  318 (488)
Q Consensus       242 ~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d-~~~~~~~~  318 (488)
                      ..+.+.+++++++.+++....++.-.+|-...+....... ....+...+|  ++...+....+...+++. ...+....
T Consensus        24 ~~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~~~~~-~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~~  102 (253)
T PF10647_consen   24 YDVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGPVRPVL-TGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGEP  102 (253)
T ss_pred             ccccceEECCCCCeEEEEEEcCCCCEEEEEcCCCcceeec-cCCccccccccCCCCEEEEEcCCCceEEEEecCCCccee
Confidence            3688999999999888873223333344333333222221 2235666666  556666655566566653 23322222


Q ss_pred             eeeecC--CccEEEEEEccCCcEEEEEe----cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeC
Q psy14511        319 TAITRE--GDVVCGLKWSPNGRYLASGS----NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEY  392 (488)
Q Consensus       319 ~~~~~~--~~~i~~~~~s~~~~~l~~~~----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~  392 (488)
                      ......  ...|..+.+||||..+|...    ++.+.+=-+...                          .++.-.    
T Consensus       103 ~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~--------------------------~~g~~~----  152 (253)
T PF10647_consen  103 VEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRD--------------------------GDGVPR----  152 (253)
T ss_pred             EEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeC--------------------------CCCCcc----
Confidence            222211  12799999999999888765    355555444322                          111000    


Q ss_pred             CCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCC-cEEE-EecCCCCc
Q psy14511        393 PRLHLIEELKIHQERILSAVLSPDQTCVAAASADE-TISI-WNCFPRDK  439 (488)
Q Consensus       393 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg-~v~i-w~~~~~~~  439 (488)
                      .....+.........+.+++|.+++.+++.+...+ .+.. ..+..+..
T Consensus       153 ~l~~~~~~~~~~~~~v~~v~W~~~~~L~V~~~~~~~~~~~~v~~dG~~~  201 (253)
T PF10647_consen  153 RLTGPRRVAPPLLSDVTDVAWSDDSTLVVLGRSAGGPVVRLVSVDGGPS  201 (253)
T ss_pred             eeccceEecccccCcceeeeecCCCEEEEEeCCCCCceeEEEEccCCcc
Confidence            00112222223356789999999998877766443 3433 44444333

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.29  E-value=0.49  Score=39.79  Aligned_cols=162  Identities=17%  Similarity=0.140  Sum_probs=101.4

Q ss_pred             ceEEEEEcCCCCe-EEEEeCCCCc-EEEEECCcceeeeeeccccc----cEEEEEecCCEEEEeecC-----CeEEEEEC
Q psy14511        243 YISCVAWKPRTTD-LAVTNTCTEY-IDLWHEQEERLIQKLRTHMH----QVIAMCWNGNLLSCGTIG-----GNILHYDV  311 (488)
Q Consensus       243 ~i~~~~~~~~~~~-l~~~~~~~~~-i~i~d~~~~~~~~~~~~~~~----~v~~~~~~~~~l~~~~~d-----g~i~i~d~  311 (488)
                      ....++++|.... ++.+ -.-|+ ..++|.+..+.+..+...++    .--..+.||.+|++.-.|     |.|-+||.
T Consensus        69 R~Hgi~~~p~~~ravafA-RrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~  147 (366)
T COG3490          69 RGHGIAFHPALPRAVAFA-RRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDA  147 (366)
T ss_pred             ccCCeecCCCCcceEEEE-ecCCceEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEec
Confidence            4556888887644 4444 55554 56788887766655533221    222344588888876544     78999999


Q ss_pred             cCCCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEE-ECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEE
Q psy14511        312 RTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIW-DFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMW  390 (488)
Q Consensus       312 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iw-d~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~  390 (488)
                      +..-..+-.+..|.-....+.+.+||+.++.+. |-|+.- |....+..                  .  .+..-++.+.
T Consensus       148 r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvan-GGIethpdfgR~~lN------------------l--dsMePSlvll  206 (366)
T COG3490         148 REGFQRVGEFSTHGIGPHEVTLMADGRTLVVAN-GGIETHPDFGRTELN------------------L--DSMEPSLVLL  206 (366)
T ss_pred             ccccceecccccCCcCcceeEEecCCcEEEEeC-CceecccccCccccc------------------h--hhcCccEEEE
Confidence            875555556777776677899999999998775 334333 22111100                  0  2345556677


Q ss_pred             eCCCcceeEE--Ee--eccccEEEEEEcCCCCEEEEEeCC
Q psy14511        391 EYPRLHLIEE--LK--IHQERILSAVLSPDQTCVAAASAD  426 (488)
Q Consensus       391 d~~~~~~~~~--~~--~~~~~v~~~~~s~~~~~l~t~~~d  426 (488)
                      |..+|+++.+  +.  .+...|..++.-+||+.++-+-..
T Consensus       207 d~atG~liekh~Lp~~l~~lSiRHld~g~dgtvwfgcQy~  246 (366)
T COG3490         207 DAATGNLIEKHTLPASLRQLSIRHLDIGRDGTVWFGCQYR  246 (366)
T ss_pred             eccccchhhhccCchhhhhcceeeeeeCCCCcEEEEEEee
Confidence            7677766543  33  345678899998998877665443

>KOG2444|consensus

Probab=96.28  E-value=0.016  Score=46.57  Aligned_cols=62  Identities=8%  Similarity=0.120  Sum_probs=38.8

Q ss_pred             CceEEEeecCCeEEEEEcccCcccceeecccCceEEEEE-EccCCcEEEEec-CCeEEEEeccc
Q psy14511          5 GNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLK-WSPNGRYLASGS-NNTVKIWDFRQ   66 (488)
Q Consensus         5 g~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~-~sp~g~~las~~-d~~i~vwd~~~   66 (488)
                      +.-+++|+.+|.|.+|..............-...|.++- --.++.+..++. |+.|+.|++.-
T Consensus        70 ~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p  133 (238)
T KOG2444|consen   70 SAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKP  133 (238)
T ss_pred             CceEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeecccc
Confidence            346788999999999998743333222323333343332 223455666666 99999999864

>KOG2280|consensus

Probab=96.06  E-value=1.5  Score=42.34  Aligned_cols=196  Identities=11%  Similarity=0.151  Sum_probs=104.3

Q ss_pred             CCcEEEEECCcceeeeeeccccccEEEEEe-cCCEEEEeecCCeEEEEECcCCCccc--eeeecCCccEEEEEEccCCcE
Q psy14511        263 TEYIDLWHEQEERLIQKLRTHMHQVIAMCW-NGNLLSCGTIGGNILHYDVRTHSDYP--TAITREGDVVCGLKWSPNGRY  339 (488)
Q Consensus       263 ~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~--~~~~~~~~~i~~~~~s~~~~~  339 (488)
                      ...|+||+.. |+.+..+.-..+.+..+.| +...|++...+|.+++|++.......  .-.......|....+..+|-.
T Consensus        63 ~~~I~If~~s-G~lL~~~~w~~~~lI~mgWs~~eeLI~v~k~g~v~Vy~~~ge~ie~~svg~e~~~~~I~ec~~f~~GVa  141 (829)
T KOG2280|consen   63 RPYIRIFNIS-GQLLGRILWKHGELIGMGWSDDEELICVQKDGTVHVYGLLGEFIESNSVGFESQMSDIVECRFFHNGVA  141 (829)
T ss_pred             ceeEEEEecc-ccchHHHHhcCCCeeeecccCCceEEEEeccceEEEeecchhhhcccccccccccCceeEEEEecCceE
Confidence            4458888864 4555555555558899999 67889999999999999986532211  111223334555555556655


Q ss_pred             EEEEecCeEEEEECCCCCCCc----ccceee-e---eecCCCCE-EEEEccCCCCeEEEEeCCCcc-eeEEEeeccccEE
Q psy14511        340 LASGSNNTVKIWDFRQLDAKR----PLGLIV-P---KLKREGRE-LVTSHGKQDCSLKMWEYPRLH-LIEELKIHQERIL  409 (488)
Q Consensus       340 l~~~~d~~i~iwd~~~~~~~~----~~~~~~-~---~~~~~~~~-l~~~~g~~~~~i~i~d~~~~~-~~~~~~~~~~~v~  409 (488)
                      +.+.++..+.+-+.......+    +..... .   .+.|+... ++....-..+ ..++...... ....+....+.+.
T Consensus       142 vlt~~g~v~~i~~~~~~~~~~~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~~v~-~~~~q~~~~~~q~~~~~~~~~~~~  220 (829)
T KOG2280|consen  142 VLTVSGQVILINGVEEPKLRKMPDIPYNELPKSCWTVFQPHRQSTILLDVDVAVG-LHICQVEESRVQLHALSWPNSSVV  220 (829)
T ss_pred             EEecCCcEEEEcCCCcchhhhCCCCCCccCCCcceeEecCCCcceeEEeechhhh-hcccceecccccccccCCCCceEE
Confidence            555544444444443321111    111111 1   22222111 1110000000 0111111111 1111222235688


Q ss_pred             EEEEcCCCCEEEEEeCCCcEEEEecCCCCcccccc--ccCCcceEEeecCCCc
Q psy14511        410 SAVLSPDQTCVAAASADETISIWNCFPRDKKRKAR--QVGSGSSLEFAILKQP  460 (488)
Q Consensus       410 ~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~~~--~~~~v~~~~~s~~~~~  460 (488)
                      .+..||+.++|+--..+|.|.+-+.+..+......  ...+...++|.-....
T Consensus       221 ki~VS~n~~~laLyt~~G~i~~vs~D~~~~lce~~~~~~~~p~qm~WcgndaV  273 (829)
T KOG2280|consen  221 KISVSPNRRFLALYTETGKIWVVSIDLSQILCEFNCTDHDPPKQMAWCGNDAV  273 (829)
T ss_pred             EEEEcCCcceEEEEecCCcEEEEecchhhhhhccCCCCCCchHhceeecCCce
Confidence            99999999999999999999999888776653322  3333446777765533

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=96.01  E-value=0.27  Score=48.64  Aligned_cols=94  Identities=14%  Similarity=0.154  Sum_probs=56.7

Q ss_pred             cEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccc
Q psy14511        327 VVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQE  406 (488)
Q Consensus       327 ~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~  406 (488)
                      .|..+.++|+|++||..+...|.|-.+...            |.+++.+--   |...-..+.+.+.  .... ...+..
T Consensus        86 ~v~~i~~n~~g~~lal~G~~~v~V~~LP~r------------~g~~~~~~~---g~~~i~Crt~~v~--~~~~-~~~~~~  147 (717)
T PF10168_consen   86 EVHQISLNPTGSLLALVGPRGVVVLELPRR------------WGKNGEFED---GKKEINCRTVPVD--ERFF-TSNSSL  147 (717)
T ss_pred             eEEEEEECCCCCEEEEEcCCcEEEEEeccc------------cCccccccC---CCcceeEEEEEec--hhhc-cCCCCc
Confidence            478899999999999998766777666431            111110000   0000011122211  1111 113455


Q ss_pred             cEEEEEEcCC---CCEEEEEeCCCcEEEEecCCCC
Q psy14511        407 RILSAVLSPD---QTCVAAASADETISIWNCFPRD  438 (488)
Q Consensus       407 ~v~~~~~s~~---~~~l~t~~~dg~v~iw~~~~~~  438 (488)
                      .|..+.|+|.   +..|+.-..|+++|+||+...+
T Consensus       148 ~i~qv~WhP~s~~~~~l~vLtsdn~lR~y~~~~~~  182 (717)
T PF10168_consen  148 EIKQVRWHPWSESDSHLVVLTSDNTLRLYDISDPQ  182 (717)
T ss_pred             eEEEEEEcCCCCCCCeEEEEecCCEEEEEecCCCC
Confidence            7999999996   5799999999999999997544

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=96.00  E-value=1.1  Score=40.21  Aligned_cols=57  Identities=16%  Similarity=0.102  Sum_probs=36.3

Q ss_pred             CCCEEEEEccCCCCeEEEEeCCCcceeE---E-EeeccccEEEEEEcCCCCEEEEEeCCCcEE
Q psy14511        372 EGRELVTSHGKQDCSLKMWEYPRLHLIE---E-LKIHQERILSAVLSPDQTCVAAASADETIS  430 (488)
Q Consensus       372 ~~~~l~~~~g~~~~~i~i~d~~~~~~~~---~-~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~  430 (488)
                      .|.+++.  ....+.|....+.....+.   . +.....++.++++.|||.+.++.+.+|.|+
T Consensus       270 ~g~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~pDG~Lyv~~d~~G~iy  330 (331)
T PF07995_consen  270 RGDLFVA--DYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQGPDGALYVSDDSDGKIY  330 (331)
T ss_dssp             TTEEEEE--ETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEETTSEEEEEE-TTTTEE
T ss_pred             cCcEEEe--cCCCCEEEEEeeecCCCccceEEccccCCCCceEEEEcCCCeEEEEECCCCeEe
Confidence            4556666  3446677777775443222   1 122344799999999999999988888874

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.96  E-value=0.87  Score=38.67  Aligned_cols=161  Identities=14%  Similarity=0.170  Sum_probs=97.6

Q ss_pred             cccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeecccc
Q psy14511         77 QCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRK  156 (488)
Q Consensus        77 ~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (488)
                      .+-...+.++.|+|+.+.|+++..   ...-.||=..+|+.++++....-.                           + 
T Consensus        82 ~g~~~nvS~LTynp~~rtLFav~n---~p~~iVElt~~GdlirtiPL~g~~---------------------------D-  130 (316)
T COG3204          82 LGETANVSSLTYNPDTRTLFAVTN---KPAAIVELTKEGDLIRTIPLTGFS---------------------------D-  130 (316)
T ss_pred             ccccccccceeeCCCcceEEEecC---CCceEEEEecCCceEEEecccccC---------------------------C-
Confidence            344456999999999999999987   666666666678877766543110                           0 


Q ss_pred             ceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCC-CcEEEEE-CCCeEEEEECCCCceEE--
Q psy14511        157 KVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGY-HDTLAVA-LDTSVYTWNTKTNKTQL--  232 (488)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~d~~v~iw~~~~~~~~~--  232 (488)
                                                                  ...+.+-+ ++++.+. .++.+.++.+..+....  
T Consensus       131 --------------------------------------------pE~Ieyig~n~fvi~dER~~~l~~~~vd~~t~~~~~  166 (316)
T COG3204         131 --------------------------------------------PETIEYIGGNQFVIVDERDRALYLFTVDADTTVISA  166 (316)
T ss_pred             --------------------------------------------hhHeEEecCCEEEEEehhcceEEEEEEcCCccEEec
Confidence                                                        00122222 3444444 66777777766542111  


Q ss_pred             ---EEecC--CCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeee---ecc-------ccccEEEEEe---cC
Q psy14511        233 ---LVEYP--TYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQK---LRT-------HMHQVIAMCW---NG  294 (488)
Q Consensus       233 ---~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~---~~~-------~~~~v~~~~~---~~  294 (488)
                         .+++.  ...+.....++|.|....++++ -...-+.||..........   ...       .-..+.++.+   .+
T Consensus       167 ~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~a-KEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvSgl~~~~~~~  245 (316)
T COG3204         167 KVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVA-KERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDVSGLEFNAITN  245 (316)
T ss_pred             cceEEeccccCCCCcCceeeecCCCCceEEEE-EccCCcEEEEEecCCcccccccccCcccccceEeeccccceecCCCC
Confidence               12221  1125667899999999999988 7777788877653321111   111       1234556666   36


Q ss_pred             CEEEEeecCCeEEEEECcC
Q psy14511        295 NLLSCGTIGGNILHYDVRT  313 (488)
Q Consensus       295 ~~l~~~~~dg~i~i~d~~~  313 (488)
                      .+++-+.+++.+.-.|...
T Consensus       246 ~LLVLS~ESr~l~Evd~~G  264 (316)
T COG3204         246 SLLVLSDESRRLLEVDLSG  264 (316)
T ss_pred             cEEEEecCCceEEEEecCC
Confidence            7777777888777777664

>KOG2280|consensus

Probab=95.94  E-value=1.5  Score=42.44  Aligned_cols=96  Identities=18%  Similarity=0.133  Sum_probs=56.3

Q ss_pred             CCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeec--cccccEEEEEecCCEEEEeecCCeEEEEECcCCCccc
Q psy14511        241 NAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLR--THMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYP  318 (488)
Q Consensus       241 ~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~  318 (488)
                      ...+..+..||+.++|+.- +..|.+.+-+.+..+....+.  .|..+ ..++|-|+--++.+.+..+.+.....  ..+
T Consensus       216 ~~~~~ki~VS~n~~~laLy-t~~G~i~~vs~D~~~~lce~~~~~~~~p-~qm~WcgndaVvl~~e~~l~lvgp~g--d~V  291 (829)
T KOG2280|consen  216 NSSVVKISVSPNRRFLALY-TETGKIWVVSIDLSQILCEFNCTDHDPP-KQMAWCGNDAVVLSWEVNLMLVGPPG--DSV  291 (829)
T ss_pred             CceEEEEEEcCCcceEEEE-ecCCcEEEEecchhhhhhccCCCCCCch-HhceeecCCceEEEEeeeEEEEcCCC--Ccc
Confidence            3567788999999999999 899999999887766666554  22222 36677444344444444454444332  223


Q ss_pred             eeeecCCccEEEEEEccCCcEEEEE
Q psy14511        319 TAITREGDVVCGLKWSPNGRYLASG  343 (488)
Q Consensus       319 ~~~~~~~~~i~~~~~s~~~~~l~~~  343 (488)
                      .....+.. +  +.--+||-.+.+.
T Consensus       292 ~f~yd~t~-~--l~~E~DGVRI~t~  313 (829)
T KOG2280|consen  292 QFYYDETA-I--LSAEVDGVRIITS  313 (829)
T ss_pred             ccccCCCc-e--eeeccCeeEEecc
Confidence            33333322 1  4444566555544

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=95.92  E-value=0.52  Score=45.38  Aligned_cols=111  Identities=14%  Similarity=0.212  Sum_probs=73.9

Q ss_pred             CceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeec-cccccEEEEEe----cCCEEEEeecCCeEEEEECc----
Q psy14511        242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLR-THMHQVIAMCW----NGNLLSCGTIGGNILHYDVR----  312 (488)
Q Consensus       242 ~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~-~~~~~v~~~~~----~~~~l~~~~~dg~i~i~d~~----  312 (488)
                      ..+.-+.-+.-++..++. +....+.|||.+.+.....-. ...+.|.++.|    +++.+++.+..+.|.+|.-.    
T Consensus        30 ~~~~li~gss~~k~a~V~-~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy  108 (631)
T PF12234_consen   30 SNPSLISGSSIKKIAVVD-SSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDY  108 (631)
T ss_pred             CCcceEeecccCcEEEEE-CCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhh
Confidence            345555555555555555 677799999998876433322 35788999999    78999999999999998642    


Q ss_pred             -CCCc---ccee--eecCC-ccEEEEEEccCCcEEEEEecCeEEEEECC
Q psy14511        313 -THSD---YPTA--ITREG-DVVCGLKWSPNGRYLASGSNNTVKIWDFR  354 (488)
Q Consensus       313 -~~~~---~~~~--~~~~~-~~i~~~~~s~~~~~l~~~~d~~i~iwd~~  354 (488)
                       +...   ++..  +..+. .+|.+..|.++|.++ +++.+.+.|+|-.
T Consensus       109 ~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~Lv-V~sGNqlfv~dk~  156 (631)
T PF12234_consen  109 TNKGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLV-VGSGNQLFVFDKW  156 (631)
T ss_pred             hcCCcccceeEEEEeecCCCCCccceeEecCCeEE-EEeCCEEEEECCC
Confidence             1111   1111  22333 568899999998554 4556788888743

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=95.85  E-value=0.77  Score=37.21  Aligned_cols=58  Identities=10%  Similarity=0.110  Sum_probs=39.0

Q ss_pred             EEEccCCcEEEEecCCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCC
Q psy14511         42 LKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGG  101 (488)
Q Consensus        42 l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~  101 (488)
                      ++-++.+.++++++.+.|.+|++.. +....+..+. --+.|..+.++..|+|+++.-..
T Consensus        23 ~c~~g~d~Lfva~~g~~Vev~~l~~-~~~~~~~~F~-Tv~~V~~l~y~~~GDYlvTlE~k   80 (215)
T PF14761_consen   23 VCCGGPDALFVAASGCKVEVYDLEQ-EECPLLCTFS-TVGRVLQLVYSEAGDYLVTLEEK   80 (215)
T ss_pred             eeccCCceEEEEcCCCEEEEEEccc-CCCceeEEEc-chhheeEEEeccccceEEEEEee
Confidence            3333434444545578899999983 3333444444 33789999999999999988764

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=95.85  E-value=2.2  Score=42.47  Aligned_cols=78  Identities=19%  Similarity=0.342  Sum_probs=53.8

Q ss_pred             ceEEEEEEccCCcEEEEecCCeEEEEeccc----------cCcCCCccc--------ccccccceeEEEEecC---CCeE
Q psy14511         37 DVVCGLKWSPNGRYLASGSNNTVKIWDFRQ----------LDAKRPQVN--------NQCHLSAVKAIAWCPW---EPTL   95 (488)
Q Consensus        37 ~~V~~l~~sp~g~~las~~d~~i~vwd~~~----------~~~~~~~~~--------~~~h~~~v~~l~~~~~---~~~l   95 (488)
                      ..|..+.++|+|++||..+...|.|-.+..          ++......+        ...+...|..+.|+|.   +..|
T Consensus        85 f~v~~i~~n~~g~~lal~G~~~v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~l  164 (717)
T PF10168_consen   85 FEVHQISLNPTGSLLALVGPRGVVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSHL  164 (717)
T ss_pred             eeEEEEEECCCCCEEEEEcCCcEEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCeE
Confidence            468999999999999999866666665532          110000000        1134457899999986   4678


Q ss_pred             EeeeCCcccceEEEEecCCCee
Q psy14511         96 LATGGGICDQTVRLWNSMNGKE  117 (488)
Q Consensus        96 ~~~~~~~~d~~i~vwd~~~~~~  117 (488)
                      ++-.+   |+++++||+.....
T Consensus       165 ~vLts---dn~lR~y~~~~~~~  183 (717)
T PF10168_consen  165 VVLTS---DNTLRLYDISDPQH  183 (717)
T ss_pred             EEEec---CCEEEEEecCCCCC
Confidence            88887   99999999976543

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>COG5276 Uncharacterized conserved protein [Function unknown]

Probab=95.64  E-value=1.2  Score=37.84  Aligned_cols=266  Identities=10%  Similarity=-0.010  Sum_probs=138.2

Q ss_pred             CceEEEeecCCeEEEEEcccCcccceeecccC-ceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccc
Q psy14511          5 GNLLSCGTIGGNILHYDVRTHSDYPTAITREG-DVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSA   82 (488)
Q Consensus         5 g~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~-~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~   82 (488)
                      +++...+..+.-++|.|+.+.......-.-.. +.-.++..  .|++...+. |.-..+.|+.+...+............
T Consensus        96 e~yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gyaygv~v--sGn~aYVadlddgfLivdvsdpssP~lagrya~~~~d  173 (370)
T COG5276          96 EEYVYVADWSSGLRIVDISTPDSPTLIGFLNTDGYAYGVYV--SGNYAYVADLDDGFLIVDVSDPSSPQLAGRYALPGGD  173 (370)
T ss_pred             ccEEEEEcCCCceEEEeccCCCCcceeccccCCceEEEEEe--cCCEEEEeeccCcEEEEECCCCCCceeeeeeccCCCC
Confidence            45666666677799999988764322111122 23344444  488888887 777778899876655544444444444


Q ss_pred             eeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccc
Q psy14511         83 VKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQS  162 (488)
Q Consensus        83 v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (488)
                      -..++.|  |++-..+..   |+-+.+-|+.+......+..-..                                    
T Consensus       174 ~~~v~IS--Gn~AYvA~~---d~GL~ivDVSnp~sPvli~~~n~------------------------------------  212 (370)
T COG5276         174 THDVAIS--GNYAYVAWR---DGGLTIVDVSNPHSPVLIGSYNT------------------------------------  212 (370)
T ss_pred             ceeEEEe--cCeEEEEEe---CCCeEEEEccCCCCCeEEEEEec------------------------------------
Confidence            5667776  555555555   88899999865432211111000                                    


Q ss_pred             cccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCC
Q psy14511        163 KRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNA  242 (488)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~  242 (488)
                                                         .-....+..++++.+++-.+.-+.+-|..+.+....+-..  ...
T Consensus       213 -----------------------------------g~g~~sv~vsdnr~y~vvy~egvlivd~s~~ssp~~~gsy--et~  255 (370)
T COG5276         213 -----------------------------------GPGTYSVSVSDNRAYLVVYDEGVLIVDVSGPSSPTVFGSY--ETS  255 (370)
T ss_pred             -----------------------------------CCceEEEEecCCeeEEEEcccceEEEecCCCCCceEeecc--ccC
Confidence                                               0012224445566677767777777777766644444332  122


Q ss_pred             ceEEE-EEcCCCCeEEEEeCCCCcEEEEECCcceee---eeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCccc
Q psy14511        243 YISCV-AWKPRTTDLAVTNTCTEYIDLWHEQEERLI---QKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYP  318 (488)
Q Consensus       243 ~i~~~-~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~---~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~  318 (488)
                      .+.++ .+.-.+++..+. ..+..+.+-|.......   ..+......-..+...+.++..+..+ ...+-+....+ ..
T Consensus       256 ~p~~~s~v~Vs~~~~Yva-dga~gl~~idisnp~spfl~ss~~t~g~~a~gi~ay~~y~yiadkn-~g~vV~~s~~s-~m  332 (370)
T COG5276         256 NPVSISTVPVSGEYAYVA-DGAKGLPIIDISNPPSPFLSSSLDTAGYQAAGIRAYGNYNYIADKN-TGAVVDASPPS-MM  332 (370)
T ss_pred             Ccccccceecccceeeee-ccccCceeEeccCCCCCchhccccCCCccccceEEecCeeEeccCC-ceEEEeCCChh-hc
Confidence            22222 233345566666 55666666676553211   11221222334444455565555554 44555554432 12


Q ss_pred             eeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEEC
Q psy14511        319 TAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDF  353 (488)
Q Consensus       319 ~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~  353 (488)
                      ....+....+.+.+.+-+.+.+.+.. ++.+.||+.
T Consensus       333 ~~~~g~~ti~~s~~v~~~~q~~y~~d~~~gl~i~~~  368 (370)
T COG5276         333 DKRPGRPTIGQSCDVSVDTQIIYSTDYNGGLSIIEY  368 (370)
T ss_pred             ccccCcceEeeecceEEEeeEEEEeecCCCEEEEEe
Confidence            22222222233333444455454444 477777764

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=95.62  E-value=0.13  Score=42.76  Aligned_cols=71  Identities=14%  Similarity=0.134  Sum_probs=52.9

Q ss_pred             ccEEEEEecCCEEEEeecCCeEEEEECcCCCcccee------ee-------cCCccEEEEEEccCCcEEEEEecCeEEEE
Q psy14511        285 HQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTA------IT-------REGDVVCGLKWSPNGRYLASGSNNTVKIW  351 (488)
Q Consensus       285 ~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~------~~-------~~~~~i~~~~~s~~~~~l~~~~d~~i~iw  351 (488)
                      .++..+..++.++++.+.+|.+++||+.+.+.....      +.       .....|..+.++.+|.-+++-++|..+.|
T Consensus        13 s~~~~l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~lsng~~y~y   92 (219)
T PF07569_consen   13 SPVSFLECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLSNGDSYSY   92 (219)
T ss_pred             CceEEEEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEeCCCEEEe
Confidence            355667778999999999999999999986532221      22       34566888888888888888777888888


Q ss_pred             ECCC
Q psy14511        352 DFRQ  355 (488)
Q Consensus       352 d~~~  355 (488)
                      +..-
T Consensus        93 ~~~L   96 (219)
T PF07569_consen   93 SPDL   96 (219)
T ss_pred             cccc
Confidence            7653

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>PHA03098 kelch-like protein; Provisional

Probab=95.56  E-value=1.8  Score=42.09  Aligned_cols=92  Identities=14%  Similarity=0.152  Sum_probs=48.5

Q ss_pred             eEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCC-----CcEEEEECCcceeee--eeccccccEEEEE
Q psy14511        219 SVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCT-----EYIDLWHEQEERLIQ--KLRTHMHQVIAMC  291 (488)
Q Consensus       219 ~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~-----~~i~i~d~~~~~~~~--~~~~~~~~v~~~~  291 (488)
                      .+..||..+.+....-.++. .......+.+  +++..+.| +.+     ..+..||..+.+-..  .+...........
T Consensus       312 ~v~~yd~~~~~W~~~~~~~~-~R~~~~~~~~--~~~lyv~G-G~~~~~~~~~v~~yd~~~~~W~~~~~lp~~r~~~~~~~  387 (534)
T PHA03098        312 SVVSYDTKTKSWNKVPELIY-PRKNPGVTVF--NNRIYVIG-GIYNSISLNTVESWKPGESKWREEPPLIFPRYNPCVVN  387 (534)
T ss_pred             cEEEEeCCCCeeeECCCCCc-ccccceEEEE--CCEEEEEe-CCCCCEecceEEEEcCCCCceeeCCCcCcCCccceEEE
Confidence            57889988887755443332 2222223332  45566666 543     346778876643221  1111111222333


Q ss_pred             ecCCEEEEeecC------CeEEEEECcCC
Q psy14511        292 WNGNLLSCGTIG------GNILHYDVRTH  314 (488)
Q Consensus       292 ~~~~~l~~~~~d------g~i~i~d~~~~  314 (488)
                      .+++..+.|+.+      ..+..||..+.
T Consensus       388 ~~~~iYv~GG~~~~~~~~~~v~~yd~~t~  416 (534)
T PHA03098        388 VNNLIYVIGGISKNDELLKTVECFSLNTN  416 (534)
T ss_pred             ECCEEEEECCcCCCCcccceEEEEeCCCC
Confidence            477777777742      35778887654

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=95.56  E-value=0.05  Score=30.83  Aligned_cols=30  Identities=37%  Similarity=0.437  Sum_probs=25.1

Q ss_pred             ceEEEEEEccC-C--cEEEEec-CCeEEEEeccc
Q psy14511         37 DVVCGLKWSPN-G--RYLASGS-NNTVKIWDFRQ   66 (488)
Q Consensus        37 ~~V~~l~~sp~-g--~~las~~-d~~i~vwd~~~   66 (488)
                      ++|.+++|||+ +  .+|+.+. .+.|.|+|+++
T Consensus         1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~   34 (43)
T PF10313_consen    1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS   34 (43)
T ss_pred             CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence            46899999984 4  5888887 79999999984

It contains a characteristic DLL sequence motif.

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=95.45  E-value=0.078  Score=43.95  Aligned_cols=62  Identities=15%  Similarity=0.173  Sum_probs=50.6

Q ss_pred             CCceEEEeecCCeEEEEEcccCccccee------ec-------ccCceEEEEEEccCCcEEEEecCCeEEEEecc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYPTA------IT-------REGDVVCGLKWSPNGRYLASGSNNTVKIWDFR   65 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~~~------~~-------~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~   65 (488)
                      ++++|++-+.+|.+++||+.+++.+...      +.       .....|..+.++.+|.-|++-++|..+.|+.+
T Consensus        21 ~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~lsng~~y~y~~~   95 (219)
T PF07569_consen   21 NGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLSNGDSYSYSPD   95 (219)
T ss_pred             CCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEeCCCEEEeccc
Confidence            6888998999999999999987754322      33       35678999999999999998888889999875

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal

Probab=95.43  E-value=0.73  Score=34.06  Aligned_cols=105  Identities=14%  Similarity=0.193  Sum_probs=67.9

Q ss_pred             eEEEeecCCeEEEEEcccCcccc------eeecccCceEEEEEEcc-----CCcEEEEecCCeEEEEeccccCcCCCccc
Q psy14511          7 LLSCGTIGGNILHYDVRTHSDYP------TAITREGDVVCGLKWSP-----NGRYLASGSNNTVKIWDFRQLDAKRPQVN   75 (488)
Q Consensus         7 ~la~g~~dg~i~iwd~~~~~~~~------~~~~~h~~~V~~l~~sp-----~g~~las~~d~~i~vwd~~~~~~~~~~~~   75 (488)
                      -|++++..|.|.|++........      ..+-.-...|++|+--|     +...|+.|+...+..||+.......    
T Consensus        12 cL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LNin~~italaaG~l~~~~~~D~LliGt~t~llaYDV~~N~d~F----   87 (136)
T PF14781_consen   12 CLACATTGGKVFIHNPHERGQRTGRQDSDISFLNINQEITALAAGRLKPDDGRDCLLIGTQTSLLAYDVENNSDLF----   87 (136)
T ss_pred             eEEEEecCCEEEEECCCccccccccccCceeEEECCCceEEEEEEecCCCCCcCEEEEeccceEEEEEcccCchhh----
Confidence            58888899999999987543221      11222334577776544     3458888999999999998644322    


Q ss_pred             ccccccceeEEEEe---cCCCeEEeeeCCcccceEEEEecCCCeee
Q psy14511         76 NQCHLSAVKAIAWC---PWEPTLLATGGGICDQTVRLWNSMNGKEK  118 (488)
Q Consensus        76 ~~~h~~~v~~l~~~---~~~~~l~~~~~~~~d~~i~vwd~~~~~~~  118 (488)
                      .+.-...|.++.+-   .....++.+|+   +..|.-+|.+..+..
T Consensus        88 yke~~DGvn~i~~g~~~~~~~~l~ivGG---ncsi~Gfd~~G~e~f  130 (136)
T PF14781_consen   88 YKEVPDGVNAIVIGKLGDIPSPLVIVGG---NCSIQGFDYEGNEIF  130 (136)
T ss_pred             hhhCccceeEEEEEecCCCCCcEEEECc---eEEEEEeCCCCcEEE
Confidence            22234677777763   22335677776   888888886554443

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=95.40  E-value=0.36  Score=44.08  Aligned_cols=134  Identities=13%  Similarity=0.151  Sum_probs=88.4

Q ss_pred             EECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCC-------eEEEEeCCCCcEEEEECCc-ceeeeeecc---
Q psy14511        214 VALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTT-------DLAVTNTCTEYIDLWHEQE-ERLIQKLRT---  282 (488)
Q Consensus       214 ~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-------~l~~~~~~~~~i~i~d~~~-~~~~~~~~~---  282 (488)
                      ++....++-.|++.|+.+.....   +.. + -+.|.|+.+       .-++| -++..|.-.|.+- +..+...+.   
T Consensus       486 g~~~~kLykmDIErGkvveeW~~---~dd-v-vVqy~p~~kf~qmt~eqtlvG-lS~~svFrIDPR~~gNKi~v~esKdY  559 (776)
T COG5167         486 GGERDKLYKMDIERGKVVEEWDL---KDD-V-VVQYNPYFKFQQMTDEQTLVG-LSDYSVFRIDPRARGNKIKVVESKDY  559 (776)
T ss_pred             CCCcccceeeecccceeeeEeec---CCc-c-eeecCCchhHHhcCccceEEe-ecccceEEecccccCCceeeeeehhc
Confidence            33566788888888888887775   333 2 577777542       23344 3455554445443 222211111   


Q ss_pred             -ccccEEEEE-ecCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECC
Q psy14511        283 -HMHQVIAMC-WNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFR  354 (488)
Q Consensus       283 -~~~~v~~~~-~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~  354 (488)
                       ......+.. -...++++++..|.|++||.-. ......+++....|..+..+.+|+++++.+...+.+-|++
T Consensus       560 ~tKn~Fss~~tTesGyIa~as~kGDirLyDRig-~rAKtalP~lG~aIk~idvta~Gk~ilaTCk~yllL~d~~  632 (776)
T COG5167         560 KTKNKFSSGMTTESGYIAAASRKGDIRLYDRIG-KRAKTALPGLGDAIKHIDVTANGKHILATCKNYLLLTDVP  632 (776)
T ss_pred             cccccccccccccCceEEEecCCCceeeehhhc-chhhhcCcccccceeeeEeecCCcEEEEeecceEEEEecc
Confidence             111222222 2578999999999999999754 3455667777888999999999999999888899999876

>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]

Probab=95.36  E-value=1.1  Score=35.83  Aligned_cols=128  Identities=11%  Similarity=0.198  Sum_probs=66.3

Q ss_pred             CcEEEEE-CCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeec----c-
Q psy14511        209 HDTLAVA-LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLR----T-  282 (488)
Q Consensus       209 ~~~~~~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~----~-  282 (488)
                      +.+..-. .++.-..+|.++-+....+..++    .=..++  .|+..|+.+ ....+++.-|.++.....+..    + 
T Consensus       101 d~~y~LTw~egvaf~~d~~t~~~lg~~~y~G----eGWgLt--~d~~~Lims-dGsatL~frdP~tfa~~~~v~VT~~g~  173 (262)
T COG3823         101 DYFYQLTWKEGVAFKYDADTLEELGRFSYEG----EGWGLT--SDDKNLIMS-DGSATLQFRDPKTFAELDTVQVTDDGV  173 (262)
T ss_pred             ceEEEEEeccceeEEEChHHhhhhcccccCC----cceeee--cCCcceEee-CCceEEEecCHHHhhhcceEEEEECCe
Confidence            3444444 67888889988888777777654    223343  456667777 555566666655432222221    1 


Q ss_pred             ccccEEEEEe-cCCEEEEe----------ecCCeEEE-EECcCCCccceeeecCCccEEEEEEccCC-cEEEEE
Q psy14511        283 HMHQVIAMCW-NGNLLSCG----------TIGGNILH-YDVRTHSDYPTAITREGDVVCGLKWSPNG-RYLASG  343 (488)
Q Consensus       283 ~~~~v~~~~~-~~~~l~~~----------~~dg~i~i-~d~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~  343 (488)
                      .-..++.+.| +|...+-.          -..|.|.- +|+..-.........+....+.+++.|++ +++++|
T Consensus       174 pv~~LNELE~VdG~lyANVw~t~~I~rI~p~sGrV~~widlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iTG  247 (262)
T COG3823         174 PVSKLNELEWVDGELYANVWQTTRIARIDPDSGRVVAWIDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLITG  247 (262)
T ss_pred             ecccccceeeeccEEEEeeeeecceEEEcCCCCcEEEEEEccCCchhcCccccccccccceeecCcCCeEEEec
Confidence            1112233333 33333222          22333333 34443222233333455667889999988 555555

>KOG4441|consensus

Probab=95.31  E-value=2.3  Score=41.33  Aligned_cols=184  Identities=14%  Similarity=0.131  Sum_probs=97.5

Q ss_pred             CCCeEEEEeCCC------CcEEEEECCcceee--eeeccccccEEEEEecCCEEEEeecC-C-----eEEEEECcCCCcc
Q psy14511        252 RTTDLAVTNTCT------EYIDLWHEQEERLI--QKLRTHMHQVIAMCWNGNLLSCGTIG-G-----NILHYDVRTHSDY  317 (488)
Q Consensus       252 ~~~~l~~~~~~~------~~i~i~d~~~~~~~--~~~~~~~~~v~~~~~~~~~l~~~~~d-g-----~i~i~d~~~~~~~  317 (488)
                      .+..+++| +..      ..+..||..++...  ..+............++...++|+.| |     .+..||....+  
T Consensus       284 ~~~l~~vG-G~~~~~~~~~~ve~yd~~~~~w~~~a~m~~~r~~~~~~~~~~~lYv~GG~~~~~~~l~~ve~YD~~~~~--  360 (571)
T KOG4441|consen  284 SGKLVAVG-GYNRQGQSLRSVECYDPKTNEWSSLAPMPSPRCRVGVAVLNGKLYVVGGYDSGSDRLSSVERYDPRTNQ--  360 (571)
T ss_pred             CCeEEEEC-CCCCCCcccceeEEecCCcCcEeecCCCCcccccccEEEECCEEEEEccccCCCcccceEEEecCCCCc--
Confidence            34455555 544      46778888775332  22332222333334478888999988 3     57788887754  


Q ss_pred             ceeeecCCccEEEEEE-ccCCcEEEEEe-c-----CeEEEEECCCCCC--Cccccee---eeeecCCCCEEEEEccCCC-
Q psy14511        318 PTAITREGDVVCGLKW-SPNGRYLASGS-N-----NTVKIWDFRQLDA--KRPLGLI---VPKLKREGRELVTSHGKQD-  384 (488)
Q Consensus       318 ~~~~~~~~~~i~~~~~-s~~~~~l~~~~-d-----~~i~iwd~~~~~~--~~~~~~~---~~~~~~~~~~l~~~~g~~~-  384 (488)
                      ......-..+-..... .-+|...|+|+ |     .++..||..+.+-  ..++...   .....-+|+..++  |+.+ 
T Consensus       361 W~~~a~M~~~R~~~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~~r~~~gv~~~~g~iYi~--GG~~~  438 (571)
T KOG4441|consen  361 WTPVAPMNTKRSDFGVAVLDGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLTRRSGHGVAVLGGKLYII--GGGDG  438 (571)
T ss_pred             eeccCCccCccccceeEEECCEEEEEeccccccccccEEEecCCCCcccccCCCCcceeeeEEEEECCEEEEE--cCcCC
Confidence            1111111111111111 12677777776 4     4588888876532  1212111   1134445555555  4433 


Q ss_pred             -----CeEEEEeCCCcceeE--EEeeccccEEEEEEcCCCCEEEEEeCCCc-----EEEEecCCCCcccc
Q psy14511        385 -----CSLKMWEYPRLHLIE--ELKIHQERILSAVLSPDQTCVAAASADET-----ISIWNCFPRDKKRK  442 (488)
Q Consensus       385 -----~~i~i~d~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~t~~~dg~-----v~iw~~~~~~~~~~  442 (488)
                           .++..||..+.+-..  .+........ ++ .-++...+.|+.|+.     |..||..+.+-...
T Consensus       439 ~~~~l~sve~YDP~t~~W~~~~~M~~~R~~~g-~a-~~~~~iYvvGG~~~~~~~~~VE~ydp~~~~W~~v  506 (571)
T KOG4441|consen  439 SSNCLNSVECYDPETNTWTLIAPMNTRRSGFG-VA-VLNGKIYVVGGFDGTSALSSVERYDPETNQWTMV  506 (571)
T ss_pred             CccccceEEEEcCCCCceeecCCcccccccce-EE-EECCEEEEECCccCCCccceEEEEcCCCCceeEc
Confidence                 457888887754322  2211111111 22 237788888888863     77788877765543

>KOG4499|consensus

Probab=95.29  E-value=1.3  Score=36.18  Aligned_cols=86  Identities=17%  Similarity=0.240  Sum_probs=60.4

Q ss_pred             EEEEEEccCCcEEEEEe--cCeEEEEE--CCCCCCCccc-----------ceeee---eecCCCCEEEEEccCCCCeEEE
Q psy14511        328 VCGLKWSPNGRYLASGS--NNTVKIWD--FRQLDAKRPL-----------GLIVP---KLKREGRELVTSHGKQDCSLKM  389 (488)
Q Consensus       328 i~~~~~s~~~~~l~~~~--d~~i~iwd--~~~~~~~~~~-----------~~~~~---~~~~~~~~l~~~~g~~~~~i~i  389 (488)
                      -+.++|+.+.+.+....  +-+|.-||  +.++....+-           ....+   +...+|.+.++  ....++|..
T Consensus       160 sNgl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va--~~ng~~V~~  237 (310)
T KOG4499|consen  160 SNGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVA--TFNGGTVQK  237 (310)
T ss_pred             CccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEE--EecCcEEEE
Confidence            35789998888777665  36676677  5554332211           11111   55556676666  467889999


Q ss_pred             EeCCCcceeEEEeeccccEEEEEEcC
Q psy14511        390 WEYPRLHLIEELKIHQERILSAVLSP  415 (488)
Q Consensus       390 ~d~~~~~~~~~~~~~~~~v~~~~~s~  415 (488)
                      .|..+|+.+.++.-....|++++|--
T Consensus       238 ~dp~tGK~L~eiklPt~qitsccFgG  263 (310)
T KOG4499|consen  238 VDPTTGKILLEIKLPTPQITSCCFGG  263 (310)
T ss_pred             ECCCCCcEEEEEEcCCCceEEEEecC
Confidence            99999999999998899999999964

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=94.92  E-value=2.4  Score=37.15  Aligned_cols=108  Identities=19%  Similarity=0.262  Sum_probs=58.6

Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCC-Cc
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTH-SD  316 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~-~~  316 (488)
                      ....+..+..+++|++++++ .......-||.....-...-......+.+|.|  ++.+.+ ....|.|++=+.... ..
T Consensus       143 ~~gs~~~~~r~~dG~~vavs-~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~-~~~Gg~~~~s~~~~~~~~  220 (302)
T PF14870_consen  143 TSGSINDITRSSDGRYVAVS-SRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWM-LARGGQIQFSDDPDDGET  220 (302)
T ss_dssp             ----EEEEEE-TTS-EEEEE-TTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEE-EETTTEEEEEE-TTEEEE
T ss_pred             CcceeEeEEECCCCcEEEEE-CcccEEEEecCCCccceEEccCccceehhceecCCCCEEE-EeCCcEEEEccCCCCccc
Confidence            45678889999999999988 66656667775432222222334678999999  444444 558888888772211 11


Q ss_pred             ---cceeeecCCccEEEEEEccCCcEEEEEecCeEE
Q psy14511        317 ---YPTAITREGDVVCGLKWSPNGRYLASGSNNTVK  349 (488)
Q Consensus       317 ---~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~  349 (488)
                         ....+....-.+..++|.+++...|+++.|.+.
T Consensus       221 w~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~G~l~  256 (302)
T PF14870_consen  221 WSEPIIPIKTNGYGILDLAYRPPNEIWAVGGSGTLL  256 (302)
T ss_dssp             E---B-TTSS--S-EEEEEESSSS-EEEEESTT-EE
T ss_pred             cccccCCcccCceeeEEEEecCCCCEEEEeCCccEE
Confidence               111111222347899999999999988877554

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=94.87  E-value=0.57  Score=37.94  Aligned_cols=106  Identities=18%  Similarity=0.172  Sum_probs=62.0

Q ss_pred             ceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec----CC---eEEEE---eccccCcCCCccc
Q psy14511          6 NLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS----NN---TVKIW---DFRQLDAKRPQVN   75 (488)
Q Consensus         6 ~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~----d~---~i~vw---d~~~~~~~~~~~~   75 (488)
                      +.|..+...+.|.+|++.........--.--+.|..+.++..|+||++-.    ..   .+++|   +....+..+....
T Consensus        29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~~~~~v~vR  108 (215)
T PF14761_consen   29 DALFVAASGCKVEVYDLEQEECPLLCTFSTVGRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQKEENSPVRVR  108 (215)
T ss_pred             ceEEEEcCCCEEEEEEcccCCCceeEEEcchhheeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhcccCCcEEEE
Confidence            44444466788999999844432221123337899999999999999975    23   56665   2221010100001


Q ss_pred             ccc---------------------cccceeEEEEecCCCeEEeeeCCcccceEEEEecCCC
Q psy14511         76 NQC---------------------HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNG  115 (488)
Q Consensus        76 ~~~---------------------h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~  115 (488)
                      ..|                     -+.++.+++-.|-...|++++    ++.+.+|.+...
T Consensus       109 iaG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~LlVg~----~~~l~lf~l~~~  165 (215)
T PF14761_consen  109 IAGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGNLLVGC----GNKLVLFTLKYQ  165 (215)
T ss_pred             EcccccccCCCCccccceEEEEecCCCCCCEEEecCCCCCEEEEc----CCEEEEEEEEEE
Confidence            111                     233566777777655666555    678999987543

>PRK13684 Ycf48-like protein; Provisional

Probab=94.75  E-value=3  Score=37.51  Aligned_cols=107  Identities=20%  Similarity=0.234  Sum_probs=57.0

Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeee-ccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCc
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKL-RTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSD  316 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~-~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~  316 (488)
                      ....+.++.+.|++.+++++  ..|.+..-.-..++.-... ..-...+.++.+  +++.+++ +..|.+++=....+..
T Consensus       171 ~~g~~~~i~~~~~g~~v~~g--~~G~i~~s~~~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~v-g~~G~~~~~s~d~G~s  247 (334)
T PRK13684        171 AAGVVRNLRRSPDGKYVAVS--SRGNFYSTWEPGQTAWTPHQRNSSRRLQSMGFQPDGNLWML-ARGGQIRFNDPDDLES  247 (334)
T ss_pred             CcceEEEEEECCCCeEEEEe--CCceEEEEcCCCCCeEEEeeCCCcccceeeeEcCCCCEEEE-ecCCEEEEccCCCCCc
Confidence            34578899999998777665  5565543211122212222 233456777777  4555554 4567665322232221


Q ss_pred             cceeeec---CCccEEEEEEccCCcEEEEEecCeEE
Q psy14511        317 YPTAITR---EGDVVCGLKWSPNGRYLASGSNNTVK  349 (488)
Q Consensus       317 ~~~~~~~---~~~~i~~~~~s~~~~~l~~~~d~~i~  349 (488)
                      -......   ....+..+.+.|+++.++++.+|.+.
T Consensus       248 W~~~~~~~~~~~~~l~~v~~~~~~~~~~~G~~G~v~  283 (334)
T PRK13684        248 WSKPIIPEITNGYGYLDLAYRTPGEIWAGGGNGTLL  283 (334)
T ss_pred             cccccCCccccccceeeEEEcCCCCEEEEcCCCeEE
Confidence            1111111   12347788899888877777666543

>KOG1898|consensus

Probab=94.60  E-value=5.9  Score=40.21  Aligned_cols=170  Identities=15%  Similarity=0.173  Sum_probs=92.9

Q ss_pred             cEEEEECCcceeeeeecccc----ccEEEEEe---cCC-EEEEee-----------cCCeEEEEECcCCCccceeeecCC
Q psy14511        265 YIDLWHEQEERLIQKLRTHM----HQVIAMCW---NGN-LLSCGT-----------IGGNILHYDVRTHSDYPTAITREG  325 (488)
Q Consensus       265 ~i~i~d~~~~~~~~~~~~~~----~~v~~~~~---~~~-~l~~~~-----------~dg~i~i~d~~~~~~~~~~~~~~~  325 (488)
                      .|++.|..+++.+..+....    ..+.++.|   +.. +++++.           .+|.++.|++-..+..+..+....
T Consensus       854 ~I~~~d~~s~~~~~~~~l~~ne~a~~v~~~~fs~~~~~~~~~v~~~~~~~l~~~~~~~g~~ytyk~~~~g~~lellh~T~  933 (1205)
T KOG1898|consen  854 SIRVFDPKSGKIICLVELGQNEAAFSVCAVDFSSSEYQPFVAVGVATTEQLDSKSISSGFVYTYKFVRNGDKLELLHKTE  933 (1205)
T ss_pred             eEEEEcCCCCceEEEEeecCCcchhheeeeeeccCCCceEEEEEeeccccccccccCCCceEEEEEEecCceeeeeeccC
Confidence            37777777665554443211    23344444   112 333332           345678887765544333333322


Q ss_pred             ccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcc-----cceeeeeecCCCCEEEEEccCCCCeEEE--EeCCCccee
Q psy14511        326 DVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRP-----LGLIVPKLKREGRELVTSHGKQDCSLKM--WEYPRLHLI  398 (488)
Q Consensus       326 ~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~-----~~~~~~~~~~~~~~l~~~~g~~~~~i~i--~d~~~~~~~  398 (488)
                      -+-.-.+..|-..++.+|-...+++||+-+.+..+.     +...+......+..+++  |...-.+.+  |+-+..+++
T Consensus       934 ~~~~v~Ai~~f~~~~LagvG~~l~~YdlG~K~lLRk~e~k~~p~~Is~iqt~~~RI~V--gD~qeSV~~~~y~~~~n~l~ 1011 (1205)
T KOG1898|consen  934 IPGPVGAICPFQGRVLAGVGRFLRLYDLGKKKLLRKCELKFIPNRISSIQTYGARIVV--GDIQESVHFVRYRREDNQLI 1011 (1205)
T ss_pred             CCccceEEeccCCEEEEecccEEEEeeCChHHHHhhhhhccCceEEEEEeecceEEEE--eeccceEEEEEEecCCCeEE
Confidence            222235667777788877789999999987644332     22233355556777777  444444443  443333332


Q ss_pred             EEEeec--cccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCC
Q psy14511        399 EELKIH--QERILSAVLSPDQTCVAAASADETISIWNCFPRD  438 (488)
Q Consensus       399 ~~~~~~--~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~  438 (488)
                       .+-..  ...|+++.+- |-..+|.+..-|.+.+-.+....
T Consensus      1012 -~fadD~~pR~Vt~~~~l-D~~tvagaDrfGNi~~vR~P~d~ 1051 (1205)
T KOG1898|consen 1012 -VFADDPVPRHVTALELL-DYDTVAGADRFGNIAVVRIPPDV 1051 (1205)
T ss_pred             -EEeCCCccceeeEEEEe-cCCceeeccccCcEEEEECCCcc
Confidence             33221  2246666553 55678888888988888776543

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=94.54  E-value=0.18  Score=28.69  Aligned_cols=29  Identities=34%  Similarity=0.362  Sum_probs=23.7

Q ss_pred             cEEEEEEccCC---cEEEEEec-CeEEEEECCC
Q psy14511        327 VVCGLKWSPNG---RYLASGSN-NTVKIWDFRQ  355 (488)
Q Consensus       327 ~i~~~~~s~~~---~~l~~~~d-~~i~iwd~~~  355 (488)
                      .+.++.|||+.   .+|+.+-+ +.+.|+|+++
T Consensus         2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~   34 (43)
T PF10313_consen    2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS   34 (43)
T ss_pred             CeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence            57899999854   47887776 9999999984

It contains a characteristic DLL sequence motif.

>PRK10115 protease 2; Provisional

Probab=94.08  E-value=7.3  Score=39.13  Aligned_cols=106  Identities=8%  Similarity=0.004  Sum_probs=64.9

Q ss_pred             ccCCceEEEee-----cCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec--C-----CeEEEEeccccCc
Q psy14511          2 CWNGNLLSCGT-----IGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--N-----NTVKIWDFRQLDA   69 (488)
Q Consensus         2 ~~dg~~la~g~-----~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~--d-----~~i~vwd~~~~~~   69 (488)
                      ++||++||.+.     ....|++.|+.++..+...+.+-.   ..++|++|++.|+...  +     ..|..+++.++..
T Consensus       135 Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~~---~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~lgt~~~  211 (686)
T PRK10115        135 TPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVE---PSFVWANDSWTFYYVRKHPVTLLPYQVWRHTIGTPAS  211 (686)
T ss_pred             CCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCcc---eEEEEeeCCCEEEEEEecCCCCCCCEEEEEECCCChh
Confidence            45899988653     233688999988875444443322   4599999998776654  2     4788888877532


Q ss_pred             -CCCccccccccccee-EEEEecCCCeEEeeeCCcccceEEEEec
Q psy14511         70 -KRPQVNNQCHLSAVK-AIAWCPWEPTLLATGGGICDQTVRLWNS  112 (488)
Q Consensus        70 -~~~~~~~~~h~~~v~-~l~~~~~~~~l~~~~~~~~d~~i~vwd~  112 (488)
                       ...+.  ........ .+..+.|+++++.......++.+.+++.
T Consensus       212 ~d~lv~--~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~  254 (686)
T PRK10115        212 QDELVY--EEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDA  254 (686)
T ss_pred             HCeEEE--eeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEEC
Confidence             22232  22222232 3333448888776655444667888885

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=93.99  E-value=1.9  Score=39.49  Aligned_cols=131  Identities=10%  Similarity=0.010  Sum_probs=68.7

Q ss_pred             EEEEEEccCCcEEEEEe------------cC-eEEEEECCCCCCC-ccccee--------eeeecCCCCEEEEEccCCCC
Q psy14511        328 VCGLKWSPNGRYLASGS------------NN-TVKIWDFRQLDAK-RPLGLI--------VPKLKREGRELVTSHGKQDC  385 (488)
Q Consensus       328 i~~~~~s~~~~~l~~~~------------d~-~i~iwd~~~~~~~-~~~~~~--------~~~~~~~~~~l~~~~g~~~~  385 (488)
                      ...|+|.++|+++++..            .+ .|.+++-.++.-. .....+        -.++.++| .+++   ... 
T Consensus        16 P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G-lyV~---~~~-   90 (367)
T TIGR02604        16 PIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG-VYVA---TPP-   90 (367)
T ss_pred             CceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC-EEEe---CCC-
Confidence            45688888888777642            12 6777765433211 111111        11667777 4443   333 


Q ss_pred             eEEEE-eCCC-----cc--ee-EEEee----ccccEEEEEEcCCCCEEEEEeCC-------------------CcEEEEe
Q psy14511        386 SLKMW-EYPR-----LH--LI-EELKI----HQERILSAVLSPDQTCVAAASAD-------------------ETISIWN  433 (488)
Q Consensus       386 ~i~i~-d~~~-----~~--~~-~~~~~----~~~~v~~~~~s~~~~~l~t~~~d-------------------g~v~iw~  433 (488)
                      .|..+ |...     ++  .+ ..+..    +......++|.|||.+.++-+..                   |.|.-++
T Consensus        91 ~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~~  170 (367)
T TIGR02604        91 DILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFRYN  170 (367)
T ss_pred             eEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceEEEEe
Confidence            34434 4421     12  12 12222    12347789999999877765521                   3444555


Q ss_pred             cCCCCccccccccCCcceEEeecCCCceEE
Q psy14511        434 CFPRDKKRKARQVGSGSSLEFAILKQPVSL  463 (488)
Q Consensus       434 ~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~  463 (488)
                      ..+++.............++|+|+++.+..
T Consensus       171 pdg~~~e~~a~G~rnp~Gl~~d~~G~l~~t  200 (367)
T TIGR02604       171 PDGGKLRVVAHGFQNPYGHSVDSWGDVFFC  200 (367)
T ss_pred             cCCCeEEEEecCcCCCccceECCCCCEEEE
Confidence            544443333223344568899988877643

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>KOG1916|consensus

Probab=93.79  E-value=0.09  Score=51.18  Aligned_cols=104  Identities=16%  Similarity=0.234  Sum_probs=55.7

Q ss_pred             CeEEEEECC--CCceEEEE--ecCCCCCCceEEEEEcC---CCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEE
Q psy14511        218 TSVYTWNTK--TNKTQLLV--EYPTYDNAYISCVAWKP---RTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAM  290 (488)
Q Consensus       218 ~~v~iw~~~--~~~~~~~~--~~~~~~~~~i~~~~~~~---~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~  290 (488)
                      |.+.+|+++  .|+....+  ....+....+.-+.|.|   +.-++.++ ..++.+++....+... ..+.+|...+..+
T Consensus       153 g~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~-~~~~~i~lL~~~ra~~-~l~rsHs~~~~d~  230 (1283)
T KOG1916|consen  153 GELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYG-LKGGEIRLLNINRALR-SLFRSHSQRVTDM  230 (1283)
T ss_pred             hhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeec-cCCCceeEeeechHHH-HHHHhcCCCcccH
Confidence            567788765  33322211  11111233334444444   44566666 7777887776655322 3445576666665


Q ss_pred             Ee-cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECC
Q psy14511        291 CW-NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFR  354 (488)
Q Consensus       291 ~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~  354 (488)
                      ++ ...++...                               ..||||+.+|.+. ||.++.|.+.
T Consensus       231 a~~~~g~~~l~-------------------------------~lSpDGtv~a~a~~dG~v~f~Qiy  265 (1283)
T KOG1916|consen  231 AFFAEGVLKLA-------------------------------SLSPDGTVFAWAISDGSVGFYQIY  265 (1283)
T ss_pred             HHHhhchhhhe-------------------------------eeCCCCcEEEEeecCCccceeeee
Confidence            54 11111111                               1678888888777 6888777653

>PHA03098 kelch-like protein; Provisional

Probab=93.71  E-value=5.1  Score=39.04  Aligned_cols=63  Identities=21%  Similarity=0.226  Sum_probs=33.1

Q ss_pred             CCceEEEeecCC------eEEEEEcccCcccce-eecccCceEEEEEEccCCcEEEEec-C-----CeEEEEeccccC
Q psy14511          4 NGNLLSCGTIGG------NILHYDVRTHSDYPT-AITREGDVVCGLKWSPNGRYLASGS-N-----NTVKIWDFRQLD   68 (488)
Q Consensus         4 dg~~la~g~~dg------~i~iwd~~~~~~~~~-~~~~h~~~V~~l~~sp~g~~las~~-d-----~~i~vwd~~~~~   68 (488)
                      ++.+++.|+.++      .+..||..+.+-... .+.........+  .-++++.+.|+ +     ..+..||..+.+
T Consensus       294 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~R~~~~~~--~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~  369 (534)
T PHA03098        294 NNVIYFIGGMNKNNLSVNSVVSYDTKTKSWNKVPELIYPRKNPGVT--VFNNRIYVIGGIYNSISLNTVESWKPGESK  369 (534)
T ss_pred             CCEEEEECCCcCCCCeeccEEEEeCCCCeeeECCCCCcccccceEE--EECCEEEEEeCCCCCEecceEEEEcCCCCc
Confidence            466677776543      567788776542110 011111111222  23677777776 3     357788877643

>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]

Probab=93.69  E-value=3.1  Score=33.53  Aligned_cols=112  Identities=8%  Similarity=-0.031  Sum_probs=70.0

Q ss_pred             cceeeeeeeCCCcEEEEE---CCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcc
Q psy14511        198 DFYTSGLDWGYHDTLAVA---LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEE  274 (488)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~---~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~  274 (488)
                      ..+...+...++.++.+.   ....|++||+.+++......+.. ..-.-..+.-..+.-+.++  -.+|.-..+|.++-
T Consensus        45 ~sfTQGL~~~~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~-~~~FgEGit~~gd~~y~LT--w~egvaf~~d~~t~  121 (262)
T COG3823          45 TSFTQGLEYLDGHILESTGLYGFSKIRVSDLTTGQEIFSEKLAP-DTVFGEGITKLGDYFYQLT--WKEGVAFKYDADTL  121 (262)
T ss_pred             hhhhcceeeeCCEEEEeccccccceeEEEeccCceEEEEeecCC-ccccccceeeccceEEEEE--eccceeEEEChHHh
Confidence            334444555556665544   56789999999998776665531 1111111221222223333  47888889999887


Q ss_pred             eeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcC
Q psy14511        275 RLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRT  313 (488)
Q Consensus       275 ~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~  313 (488)
                      +++..+. .++.-..++.|+..|+.+.....++.-|.++
T Consensus       122 ~~lg~~~-y~GeGWgLt~d~~~LimsdGsatL~frdP~t  159 (262)
T COG3823         122 EELGRFS-YEGEGWGLTSDDKNLIMSDGSATLQFRDPKT  159 (262)
T ss_pred             hhhcccc-cCCcceeeecCCcceEeeCCceEEEecCHHH
Confidence            7777664 4566678888887788777777777777654

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=93.65  E-value=0.63  Score=44.87  Aligned_cols=96  Identities=13%  Similarity=0.216  Sum_probs=60.5

Q ss_pred             ecCCeEEEEEcccCcccceeecccCceEEEEEEc--cCCcEEEEec-CCeEEEEecc------ccCcCCCccc--ccccc
Q psy14511         12 TIGGNILHYDVRTHSDYPTAITREGDVVCGLKWS--PNGRYLASGS-NNTVKIWDFR------QLDAKRPQVN--NQCHL   80 (488)
Q Consensus        12 ~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~s--p~g~~las~~-d~~i~vwd~~------~~~~~~~~~~--~~~h~   80 (488)
                      +....+.|||...+......--...+.|.++.|.  |||+.+.+.+ .+.|.++.-.      .+....++..  +..|+
T Consensus        48 ~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~i~~i~i~~~T  127 (631)
T PF12234_consen   48 SSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGPSWAPIRKIDISSHT  127 (631)
T ss_pred             CCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCcccceeEEEEeecCC
Confidence            3455799999987763322222456789999996  5888776666 8889888531      1111112211  23344


Q ss_pred             -cceeEEEEecCCCeEEeeeCCcccceEEEEec
Q psy14511         81 -SAVKAIAWCPWEPTLLATGGGICDQTVRLWNS  112 (488)
Q Consensus        81 -~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~  112 (488)
                       .+|.+..|.++|..++++     .+.+.|++-
T Consensus       128 ~h~Igds~Wl~~G~LvV~s-----GNqlfv~dk  155 (631)
T PF12234_consen  128 PHPIGDSIWLKDGTLVVGS-----GNQLFVFDK  155 (631)
T ss_pred             CCCccceeEecCCeEEEEe-----CCEEEEECC
Confidence             589999999999543333     457888873

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=93.45  E-value=1.2  Score=43.45  Aligned_cols=106  Identities=21%  Similarity=0.260  Sum_probs=68.7

Q ss_pred             CCceEEEeecCCeEEEEEccc-------C----c-------ccceeecccCceEEEEEEc--cCCcEEEEec-CCeEEEE
Q psy14511          4 NGNLLSCGTIGGNILHYDVRT-------H----S-------DYPTAITREGDVVCGLKWS--PNGRYLASGS-NNTVKIW   62 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~-------~----~-------~~~~~~~~h~~~V~~l~~s--p~g~~las~~-d~~i~vw   62 (488)
                      +...|+.+..||.|.+|.+++       .    .       ..+.....-...++.++++  ...++||.++ ...|.|+
T Consensus       113 ~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVF  192 (717)
T PF08728_consen  113 GEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYKKSRLIAVSSNSQEVTVF  192 (717)
T ss_pred             CeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecCcceEEEEecCCceEEEE
Confidence            456788899999999997632       0    0       0112222334578999999  8888999998 6778887


Q ss_pred             eccccCcCCCcccccccccceeEEEEecCC---C---eEEeeeCCcccceEEEEec
Q psy14511         63 DFRQLDAKRPQVNNQCHLSAVKAIAWCPWE---P---TLLATGGGICDQTVRLWNS  112 (488)
Q Consensus        63 d~~~~~~~~~~~~~~~h~~~v~~l~~~~~~---~---~l~~~~~~~~d~~i~vwd~  112 (488)
                      -+...........-..|...|-+|+|.++.   .   .++++.-   .|.+.+|++
T Consensus       193 af~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI---~G~v~~~~I  245 (717)
T PF08728_consen  193 AFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDI---SGEVWTFKI  245 (717)
T ss_pred             EEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEec---cCcEEEEEE
Confidence            665422222221122366789999997754   1   3444443   899988887

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>PHA02790 Kelch-like protein; Provisional

Probab=93.44  E-value=6.1  Score=37.76  Aligned_cols=130  Identities=9%  Similarity=0.014  Sum_probs=65.9

Q ss_pred             eEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCC--CcEEEEECCccee--eeeeccccccEEEEEecC
Q psy14511        219 SVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCT--EYIDLWHEQEERL--IQKLRTHMHQVIAMCWNG  294 (488)
Q Consensus       219 ~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~--~~i~i~d~~~~~~--~~~~~~~~~~v~~~~~~~  294 (488)
                      .+..||..++.......++. .......+.  -++...++| +.+  ..+..||..+.+-  +..+............+|
T Consensus       288 ~v~~Ydp~~~~W~~~~~m~~-~r~~~~~v~--~~~~iYviG-G~~~~~sve~ydp~~n~W~~~~~l~~~r~~~~~~~~~g  363 (480)
T PHA02790        288 NAIAVNYISNNWIPIPPMNS-PRLYASGVP--ANNKLYVVG-GLPNPTSVERWFHGDAAWVNMPSLLKPRCNPAVASINN  363 (480)
T ss_pred             eEEEEECCCCEEEECCCCCc-hhhcceEEE--ECCEEEEEC-CcCCCCceEEEECCCCeEEECCCCCCCCcccEEEEECC
Confidence            57788988887665554432 222222222  355555555 442  4578888765432  222222222233444588


Q ss_pred             CEEEEeecCC---eEEEEECcCCC-ccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCC
Q psy14511        295 NLLSCGTIGG---NILHYDVRTHS-DYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQL  356 (488)
Q Consensus       295 ~~l~~~~~dg---~i~i~d~~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~  356 (488)
                      +..+.|+.++   .+..||.++.. .....+....... ++ ..-+++..+.|  |...+||.++.
T Consensus       364 ~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~~-~~-~~~~~~IYv~G--G~~e~ydp~~~  425 (480)
T PHA02790        364 VIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYKS-CA-LVFGRRLFLVG--RNAEFYCESSN  425 (480)
T ss_pred             EEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCccccc-eE-EEECCEEEEEC--CceEEecCCCC
Confidence            8888887654   46778876542 0000111111111 11 23356666666  45677887654

>KOG4659|consensus

Probab=93.43  E-value=11  Score=39.60  Aligned_cols=24  Identities=21%  Similarity=0.257  Sum_probs=17.5

Q ss_pred             EeeccccEEEEEEcCCCCEEEEEe
Q psy14511        401 LKIHQERILSAVLSPDQTCVAAAS  424 (488)
Q Consensus       401 ~~~~~~~v~~~~~s~~~~~l~t~~  424 (488)
                      -.+|-+.+.+++.+|||...++-+
T Consensus       657 t~A~lnsp~alaVsPdg~v~IAD~  680 (1899)
T KOG4659|consen  657 TQAKLNSPYALAVSPDGDVIIADS  680 (1899)
T ss_pred             hccccCCcceEEECCCCcEEEecC
Confidence            345667788999999988766543

>KOG4499|consensus

Probab=93.36  E-value=3.9  Score=33.65  Aligned_cols=50  Identities=8%  Similarity=0.176  Sum_probs=41.7

Q ss_pred             EEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEecCC
Q psy14511        245 SCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGN  295 (488)
Q Consensus       245 ~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~  295 (488)
                      -.++...+|+..+++ -..++|.-.|..+++.+..+.-....+++++|-|.
T Consensus       215 DGm~ID~eG~L~Va~-~ng~~V~~~dp~tGK~L~eiklPt~qitsccFgGk  264 (310)
T KOG4499|consen  215 DGMTIDTEGNLYVAT-FNGGTVQKVDPTTGKILLEIKLPTPQITSCCFGGK  264 (310)
T ss_pred             CcceEccCCcEEEEE-ecCcEEEEECCCCCcEEEEEEcCCCceEEEEecCC
Confidence            345556678777777 88999999999999999999888999999999543

>PLN00033 photosystem II stability/assembly factor; Provisional

Probab=93.34  E-value=6.5  Score=36.20  Aligned_cols=138  Identities=8%  Similarity=0.019  Sum_probs=78.8

Q ss_pred             CCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcce-----eeeeecc
Q psy14511        208 YHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEER-----LIQKLRT  282 (488)
Q Consensus       208 ~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~-----~~~~~~~  282 (488)
                      ++.+++.+..|.+..=.-.....=.....+  ....++.+.+.+++..++++  ..|.+. +....++     .......
T Consensus       249 dG~~~~vg~~G~~~~s~d~G~~~W~~~~~~--~~~~l~~v~~~~dg~l~l~g--~~G~l~-~S~d~G~~~~~~~f~~~~~  323 (398)
T PLN00033        249 DGDYVAVSSRGNFYLTWEPGQPYWQPHNRA--SARRIQNMGWRADGGLWLLT--RGGGLY-VSKGTGLTEEDFDFEEADI  323 (398)
T ss_pred             CCCEEEEECCccEEEecCCCCcceEEecCC--CccceeeeeEcCCCCEEEEe--CCceEE-EecCCCCcccccceeeccc
Confidence            456777777666543221211110122222  45678999999999888776  556653 3333332     1222221


Q ss_pred             --ccccEEEEEe-cCCEEEEeecCCeEEEEECcCCCccceee--ecCCccEEEEEEccCCcEEEEEecCeEEEE
Q psy14511        283 --HMHQVIAMCW-NGNLLSCGTIGGNILHYDVRTHSDYPTAI--TREGDVVCGLKWSPNGRYLASGSNNTVKIW  351 (488)
Q Consensus       283 --~~~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~~i~~~~~s~~~~~l~~~~d~~i~iw  351 (488)
                        ....+.++.+ +++.+++++..|.+.... ..++.-....  ..-....+.+.|.++++.++++.+|.|.-|
T Consensus       324 ~~~~~~l~~v~~~~d~~~~a~G~~G~v~~s~-D~G~tW~~~~~~~~~~~~ly~v~f~~~~~g~~~G~~G~il~~  396 (398)
T PLN00033        324 KSRGFGILDVGYRSKKEAWAAGGSGILLRST-DGGKSWKRDKGADNIAANLYSVKFFDDKKGFVLGNDGVLLRY  396 (398)
T ss_pred             CCCCcceEEEEEcCCCcEEEEECCCcEEEeC-CCCcceeEccccCCCCcceeEEEEcCCCceEEEeCCcEEEEe
Confidence              2234788888 566677777788666543 2222211111  223456889999988999998888887654

>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]

Probab=93.26  E-value=0.78  Score=41.37  Aligned_cols=71  Identities=14%  Similarity=0.103  Sum_probs=47.3

Q ss_pred             ccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCC
Q psy14511        285 HQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLD  357 (488)
Q Consensus       285 ~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~  357 (488)
                      .++..+..  +-+-+++-+.+|++..+.....+...  +..--..+.-+++||.+.++++-..|.++++.+++..
T Consensus       317 a~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL--~~~~~~~~~~~~~Sp~~~~Ll~e~~gki~~~~l~Nr~  389 (733)
T COG4590         317 AEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLL--FERAYQAPQLVAMSPNQAYLLSEDQGKIRLAQLENRN  389 (733)
T ss_pred             ccceeeccccccceEEEEcCCCceeeeecccCccee--hhhhhcCcceeeeCcccchheeecCCceEEEEecCCC
Confidence            34444444  34567777888888887765533222  1222224667899999999998877999999988754

>PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A

Probab=93.17  E-value=8.6  Score=37.11  Aligned_cols=242  Identities=12%  Similarity=0.060  Sum_probs=114.7

Q ss_pred             CCcEEEEECCCeEEEEECCCCce-EEEEecCCCCCCceEEEEEcCCC-CeEEEEeCC--CCcEEEEECCcceeeeeeccc
Q psy14511        208 YHDTLAVALDTSVYTWNTKTNKT-QLLVEYPTYDNAYISCVAWKPRT-TDLAVTNTC--TEYIDLWHEQEERLIQKLRTH  283 (488)
Q Consensus       208 ~~~~~~~~~d~~v~iw~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~~--~~~i~i~d~~~~~~~~~~~~~  283 (488)
                      ...++.+..+|.++...+..... .....+.. .....+++++..++ .+++++ +.  |+.+.-+....-+.+..+. .
T Consensus       222 ~~~~lL~~e~G~l~~l~l~~~~~~i~i~~~g~-~~~~~s~l~~l~~g~d~lf~g-s~~gds~l~~~~~~~l~~~~~~~-N  298 (504)
T PF10433_consen  222 GDRILLQDEDGDLYLLTLDNDGGSISITYLGT-LCSIASSLTYLKNGGDYLFVG-SEFGDSQLLQISLSNLEVLDSLP-N  298 (504)
T ss_dssp             SSEEEEEETTSEEEEEEEEEEEEEEEEEEEEE---S-ESEEEEESTT--EEEEE-ESSS-EEEEEEESESEEEEEEE---
T ss_pred             CCEEEEEeCCCeEEEEEEEECCCeEEEEEcCC-cCChhheEEEEcCCCEEEEEE-EecCCcEEEEEeCCCcEEEEecc-C
Confidence            45788888999999988776442 12222211 13455677776665 355555 44  4455555544444555554 3


Q ss_pred             cccEEEEEe-c-----CC------EEEEee---cCCeEEEEECcCCCc-cceeeecC--CccEEEEEEcc-CCcEEEEEe
Q psy14511        284 MHQVIAMCW-N-----GN------LLSCGT---IGGNILHYDVRTHSD-YPTAITRE--GDVVCGLKWSP-NGRYLASGS  344 (488)
Q Consensus       284 ~~~v~~~~~-~-----~~------~l~~~~---~dg~i~i~d~~~~~~-~~~~~~~~--~~~i~~~~~s~-~~~~l~~~~  344 (488)
                      -+++..++. +     ..      .+++++   .+|.+++..-.-+-. ........  -..++.+.... ++.+|+.+.
T Consensus       299 ~~Pi~D~~v~~~~~~~~~~~~~~~~lv~~sG~g~~gsL~~lr~Gi~~~~~~~~~~~l~~v~~iW~l~~~~~~~~~lv~S~  378 (504)
T PF10433_consen  299 WGPIVDFCVVDSSNSGQPSNPSSDQLVACSGAGKRGSLRILRNGIGIEGLELASSELPGVTGIWTLKLSSSDHSYLVLSF  378 (504)
T ss_dssp             --SEEEEEEE-TSSSSS-------EEEEEESSGGG-EEEEEEESBEEE--EEEEEEESTEEEEEEE-SSSSSBSEEEEEE
T ss_pred             cCCccceEEeccccCCCCcccccceEEEEECcCCCCcEEEEeccCCceeeeeeccCCCCceEEEEeeecCCCceEEEEEc
Confidence            567888777 1     11      455543   467787764321111 01111111  22344444332 246777666


Q ss_pred             cCeEEEEECCC---CCCCcccceeeeeecCCCCEEEEEccC-------CCCeEEEEeCCCcceeEEEeecc-ccEEEEEE
Q psy14511        345 NNTVKIWDFRQ---LDAKRPLGLIVPKLKREGRELVTSHGK-------QDCSLKMWEYPRLHLIEELKIHQ-ERILSAVL  413 (488)
Q Consensus       345 d~~i~iwd~~~---~~~~~~~~~~~~~~~~~~~~l~~~~g~-------~~~~i~i~d~~~~~~~~~~~~~~-~~v~~~~~  413 (488)
                      ...-+++.+..   .+....+ ... .|..+...+++..-.       ....|++.+...++......... ..|.+.+.
T Consensus       379 ~~~T~vl~~~~~d~~e~~~e~-~~~-~f~~~~~Tl~~~~~~~~~ivQVt~~~i~l~~~~~~~~~~~w~~~~~~~I~~a~~  456 (504)
T PF10433_consen  379 PNETRVLQISEGDDGEEVEEV-EED-GFDTDEPTLAAGNVGDGRIVQVTPKGIRLIDLEDGKLTQEWKPPAGSIIVAASI  456 (504)
T ss_dssp             SSEEEEEEES----SSEEEEE-----TS-SSS-EEEEEEETTTEEEEEESSEEEEEESSSTSEEEEEE-TTS---SEEEE
T ss_pred             CCceEEEEEecccCCcchhhh-hhc-cCCCCCCCeEEEEcCCCeEEEEecCeEEEEECCCCeEEEEEeCCCCCeEEEEEE
Confidence            56666666642   2211111 111 333344444332111       14557888877777666654333 34555554


Q ss_pred             cCCCCEEEEEeCCCcEEEEecCCCCcccc------ccccCCcceEEeec
Q psy14511        414 SPDQTCVAAASADETISIWNCFPRDKKRK------ARQVGSGSSLEFAI  456 (488)
Q Consensus       414 s~~~~~l~t~~~dg~v~iw~~~~~~~~~~------~~~~~~v~~~~~s~  456 (488)
                        ++.+++.+-.++.+.++.+........      ......+.++...|
T Consensus       457 --~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eis~l~i~p  503 (504)
T PF10433_consen  457 --NDPQVLVALSGGELVYFELDDNKISVSDNDETILELDNEISCLSIEP  503 (504)
T ss_dssp             --SSSEEEEEE-TTEEEEEEEETTEEEEEEE----EE-SS-EEEEE---
T ss_pred             --CCCEEEEEEeCCcEEEEEEECCceeeeeeccccccCCCceEEEEeCC
Confidence              345677777788899999887665421      12456677766655

...

>KOG1916|consensus

Probab=93.06  E-value=0.13  Score=50.24  Aligned_cols=111  Identities=14%  Similarity=0.149  Sum_probs=71.0

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEE-----------EccCCcEEEEec-CCeEEEEecc--ccCc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLK-----------WSPNGRYLASGS-NNTVKIWDFR--QLDA   69 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~-----------~sp~g~~las~~-d~~i~vwd~~--~~~~   69 (488)
                      +.-++..+-.+++|++.+..+...  ..+.+|...+..++           .||||+.+|.+. ||.++.|.+.  ....
T Consensus       194 ~~~~ic~~~~~~~i~lL~~~ra~~--~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiyi~g~~~  271 (1283)
T KOG1916|consen  194 NKVYICYGLKGGEIRLLNINRALR--SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIYITGKIV  271 (1283)
T ss_pred             ccceeeeccCCCceeEeeechHHH--HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeeeeeecccc
Confidence            445677778889999888766542  45566877666655           589999999887 9988888764  2233


Q ss_pred             CCCccccccccc-ceeEEEEecCC---------CeEEeeeCCcccceEEEEecCCCeee
Q psy14511         70 KRPQVNNQCHLS-AVKAIAWCPWE---------PTLLATGGGICDQTVRLWNSMNGKEK  118 (488)
Q Consensus        70 ~~~~~~~~~h~~-~v~~l~~~~~~---------~~l~~~~~~~~d~~i~vwd~~~~~~~  118 (488)
                      .+++...+.|.+ +-.|.-|..+.         .+++.+..  ....+++|.-...+|+
T Consensus       272 ~rclhewkphd~~p~vC~lc~~~~~~~v~i~~w~~~Itttd--~nre~k~w~~a~w~Cl  328 (1283)
T KOG1916|consen  272 HRCLHEWKPHDKHPRVCWLCHKQEILVVSIGKWVLRITTTD--VNREEKFWAEAPWQCL  328 (1283)
T ss_pred             HhhhhccCCCCCCCceeeeeccccccCCccceeEEEEeccc--CCcceeEeeccchhhh
Confidence            456666777773 33333343221         12333333  3677899987666655

>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=92.81  E-value=0.43  Score=26.65  Aligned_cols=29  Identities=28%  Similarity=0.524  Sum_probs=20.4

Q ss_pred             ccCceEEEEEEccCCcEEEEec--C--CeEEEE
Q psy14511         34 REGDVVCGLKWSPNGRYLASGS--N--NTVKIW   62 (488)
Q Consensus        34 ~h~~~V~~l~~sp~g~~las~~--d--~~i~vw   62 (488)
                      .....-....|||||++|+..+  +  |.-.||
T Consensus         6 ~~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy   38 (39)
T PF07676_consen    6 NSPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY   38 (39)
T ss_dssp             -SSSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred             cCCccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence            3445678899999999999887  5  555555

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....

>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat

Probab=92.72  E-value=0.76  Score=26.03  Aligned_cols=32  Identities=9%  Similarity=0.259  Sum_probs=22.3

Q ss_pred             CCCCEEEEEccCCCCeEEEEeCCCcceeEEEee
Q psy14511        371 REGRELVTSHGKQDCSLKMWEYPRLHLIEELKI  403 (488)
Q Consensus       371 ~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~  403 (488)
                      |+++.++++ ...+++|.++|..+++.+..+.-
T Consensus         1 pd~~~lyv~-~~~~~~v~~id~~~~~~~~~i~v   32 (42)
T TIGR02276         1 PDGTKLYVT-NSGSNTVSVIDTATNKVIATIPV   32 (42)
T ss_pred             CCCCEEEEE-eCCCCEEEEEECCCCeEEEEEEC
Confidence            466666664 45577888888888777776654

This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).

>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118

Probab=92.72  E-value=6  Score=34.16  Aligned_cols=197  Identities=12%  Similarity=0.117  Sum_probs=115.5

Q ss_pred             CceEEEEEcCCCCeEEEEeCCCCcEEEEECC------cc-eeeeeecc-----ccccEEEEEec--------------CC
Q psy14511        242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQ------EE-RLIQKLRT-----HMHQVIAMCWN--------------GN  295 (488)
Q Consensus       242 ~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~------~~-~~~~~~~~-----~~~~v~~~~~~--------------~~  295 (488)
                      ..-..++++|.+..-++. ...+...+||..      .. ..+-.+..     .....+.+.|+              ..
T Consensus        23 ~N~WGia~~p~~~~WVad-ngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a  101 (336)
T TIGR03118        23 RNAWGLSYRPGGPFWVAN-TGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPS  101 (336)
T ss_pred             cccceeEecCCCCEEEec-CCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccce
Confidence            346789999998777666 788899999986      11 22223321     12334555552              12


Q ss_pred             EEEEeecCCeEEEEECcCCCc----cceeeecC-CccE-EEEEEcc--CCcEEEEEe-c-CeEEEEECCCCCCCcc--cc
Q psy14511        296 LLSCGTIGGNILHYDVRTHSD----YPTAITRE-GDVV-CGLKWSP--NGRYLASGS-N-NTVKIWDFRQLDAKRP--LG  363 (488)
Q Consensus       296 ~l~~~~~dg~i~i~d~~~~~~----~~~~~~~~-~~~i-~~~~~s~--~~~~l~~~~-d-~~i~iwd~~~~~~~~~--~~  363 (488)
                      .++.+++||+|.-|...-...    ....+... ...| ..+++..  .+.+|..+. . ++|.+||-.-......  +.
T Consensus       102 ~Fif~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~~~~~~g~F~  181 (336)
T TIGR03118       102 RFLFVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFRPPPLPGSFI  181 (336)
T ss_pred             eEEEEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCccccccCCCCcc
Confidence            467889999999999644322    11122211 2223 4556554  367787777 3 9999998653321100  00


Q ss_pred             e--eeeeecC-----CCCEEEEEc------------cCCCCeEEEEeCCCcceeEEEe--eccccEEEEEEcC------C
Q psy14511        364 L--IVPKLKR-----EGRELVTSH------------GKQDCSLKMWEYPRLHLIEELK--IHQERILSAVLSP------D  416 (488)
Q Consensus       364 ~--~~~~~~~-----~~~~l~~~~------------g~~~~~i~i~d~~~~~~~~~~~--~~~~~v~~~~~s~------~  416 (488)
                      .  +..-|.|     -+..|+++.            |.--|.|-+||+. +.+++++.  +.-+.-+.|+..|      .
T Consensus       182 DP~iPagyAPFnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~~-G~l~~r~as~g~LNaPWG~a~APa~FG~~s  260 (336)
T TIGR03118       182 DPALPAGYAPFNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTLN-GQLLRRVASSGRLNAPWGLAIAPESFGSLS  260 (336)
T ss_pred             CCCCCCCCCCcceEEECCeEEEEEEecCCcccccccCCCcceEEEEcCC-CcEEEEeccCCcccCCceeeeChhhhCCCC
Confidence            0  0001222     122222221            3334688999964 77777763  2334567888866      4


Q ss_pred             CCEEEEEeCCCcEEEEecCCCCcc
Q psy14511        417 QTCVAAASADETISIWNCFPRDKK  440 (488)
Q Consensus       417 ~~~l~t~~~dg~v~iw~~~~~~~~  440 (488)
                      +.+|+---.||+|..+|..+++.+
T Consensus       261 g~lLVGNFGDG~InaFD~~sG~~~  284 (336)
T TIGR03118       261 GALLVGNFGDGTINAYDPQSGAQL  284 (336)
T ss_pred             CCeEEeecCCceeEEecCCCCcee
Confidence            667777667999999999988765

This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.

>KOG4460|consensus

Probab=92.70  E-value=5  Score=37.26  Aligned_cols=95  Identities=13%  Similarity=0.082  Sum_probs=53.5

Q ss_pred             cEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeecc
Q psy14511        327 VVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQ  405 (488)
Q Consensus       327 ~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~  405 (488)
                      .|..+..++.|..++..+ +|.+.++=.+....        ...-.||+-.+.        .+.+.+.  +.+.+-. ..
T Consensus       105 eV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~--------~s~~eDgk~~v~--------CRt~~i~--~~~ftss-~~  165 (741)
T KOG4460|consen  105 EVYQVLLSPTGSHVALIGIKGLMVMELPKRWGK--------NSEFEDGKSTVN--------CRTTPVA--ERFFTSS-TS  165 (741)
T ss_pred             EEEEEEecCCCceEEEecCCeeEEEEchhhcCc--------cceecCCCceEE--------EEeeccc--ceeeccC-Cc
Confidence            367788899999988877 45444332221100        011122332222        1222221  1122111 12


Q ss_pred             ccEEEEEEcCCC---CEEEEEeCCCcEEEEecCCCCcc
Q psy14511        406 ERILSAVLSPDQ---TCVAAASADETISIWNCFPRDKK  440 (488)
Q Consensus       406 ~~v~~~~~s~~~---~~l~t~~~dg~v~iw~~~~~~~~  440 (488)
                      -.+..++|+|+.   ..|..-+.|..||+||+......
T Consensus       166 ltl~Qa~WHP~S~~D~hL~iL~sdnviRiy~lS~~tel  203 (741)
T KOG4460|consen  166 LTLKQAAWHPSSILDPHLVLLTSDNVIRIYSLSEPTEL  203 (741)
T ss_pred             eeeeeccccCCccCCceEEEEecCcEEEEEecCCcchh
Confidence            246788999975   67888889999999999877655

>KOG3630|consensus

Probab=92.67  E-value=2  Score=43.69  Aligned_cols=138  Identities=12%  Similarity=-0.005  Sum_probs=83.8

Q ss_pred             ccEEEEEEccCCcEEEEEe--c-CeEEEEECCCCCCCc-----cccee-----------eeeecCCCCEEEEEccCCCCe
Q psy14511        326 DVVCGLKWSPNGRYLASGS--N-NTVKIWDFRQLDAKR-----PLGLI-----------VPKLKREGRELVTSHGKQDCS  386 (488)
Q Consensus       326 ~~i~~~~~s~~~~~l~~~~--d-~~i~iwd~~~~~~~~-----~~~~~-----------~~~~~~~~~~l~~~~g~~~~~  386 (488)
                      -++..+...+|+...++..  + -.|..||+++.....     ++...           ...|.|.-....+. ...|+.
T Consensus       101 ~pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av-~l~dls  179 (1405)
T KOG3630|consen  101 IPIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAV-DLSDLS  179 (1405)
T ss_pred             ccceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhh-hccccc
Confidence            3466677777877666554  2 478999998654322     11111           11455443222221 356777


Q ss_pred             EEEEeCCCcc-eeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcc---cc-ccccCCcceEEeecCCCce
Q psy14511        387 LKMWEYPRLH-LIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKK---RK-ARQVGSGSSLEFAILKQPV  461 (488)
Q Consensus       387 i~i~d~~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~---~~-~~~~~~v~~~~~s~~~~~~  461 (488)
                      |++..+.... .+..+ ......++++|+|.|+.++.|-..|++.-|...-....   .. ......|.++.|-..-..+
T Consensus       180 l~V~~~~~~~~~v~s~-p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~leik~~ip~Pp~~e~yrvl~v~Wl~t~efl  258 (1405)
T KOG3630|consen  180 LRVKSTKQLAQNVTSF-PVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSLEIKSEIPEPPVEENYRVLSVTWLSTQEFL  258 (1405)
T ss_pred             hhhhhhhhhhhhhccc-CcccceeeEEeccccceeeEecCCCeEEEeecccceeecccCCCcCCCcceeEEEEecceeEE
Confidence            7777664322 22222 23456899999999999999999999988876543222   11 2235788999998755555


Q ss_pred             EEEE
Q psy14511        462 SLTA  465 (488)
Q Consensus       462 ~~~~  465 (488)
                      ..+.
T Consensus       259 vvy~  262 (1405)
T KOG3630|consen  259 VVYG  262 (1405)
T ss_pred             EEec
Confidence            4444

>KOG2377|consensus

Probab=92.55  E-value=8.2  Score=35.28  Aligned_cols=71  Identities=13%  Similarity=0.075  Sum_probs=47.7

Q ss_pred             EEEEEccCCcEEEEecCCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecC
Q psy14511         40 CGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSM  113 (488)
Q Consensus        40 ~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~  113 (488)
                      +.+-|....+.|.+...|.+.=|-+.......++..-....++|.++.|++|.+.+++--.   |++|.+.+..
T Consensus        26 ngvFfDDaNkqlfavrSggatgvvvkgpndDVpiSfdm~d~G~I~SIkFSlDnkilAVQR~---~~~v~f~nf~   96 (657)
T KOG2377|consen   26 NGVFFDDANKQLFAVRSGGATGVVVKGPNDDVPISFDMDDKGEIKSIKFSLDNKILAVQRT---SKTVDFCNFI   96 (657)
T ss_pred             cceeeccCcceEEEEecCCeeEEEEeCCCCCCCceeeecCCCceeEEEeccCcceEEEEec---CceEEEEecC
Confidence            4455655555555554566677777654433344333446689999999999987666665   9999999874

>KOG1900|consensus

Probab=92.54  E-value=1.8  Score=44.69  Aligned_cols=173  Identities=15%  Similarity=0.186  Sum_probs=98.8

Q ss_pred             EEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe-c---C------CEEEEeecCCeEEEEECcCCC
Q psy14511        246 CVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW-N---G------NLLSCGTIGGNILHYDVRTHS  315 (488)
Q Consensus       246 ~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~---~------~~l~~~~~dg~i~i~d~~~~~  315 (488)
                      .+-+-|.=+..-.+  .|..+.+|+.+++.....+.+....|..+.. .   |      ++++.-..--.|.++-+.-..
T Consensus        83 ~mGiFpeI~RaWiT--iDn~L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~  160 (1311)
T KOG1900|consen   83 DMGIFPEIGRAWIT--IDNNLFLWNYESDNELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDE  160 (1311)
T ss_pred             eeccchhhcceEEE--eCCeEEEEEcCCCCccccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEecc
Confidence            33444443333333  6899999999998888888877777777665 1   1      233333344456665443221


Q ss_pred             --ccc------eeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeE
Q psy14511        316 --DYP------TAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSL  387 (488)
Q Consensus       316 --~~~------~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i  387 (488)
                        ...      ..+......|.++....+|+.+.+|.||  .+|.+.-......+........+....+..        +
T Consensus       161 ~~~~~~~f~~~~~i~~dg~~V~~I~~t~nGRIF~~G~dg--~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~--------l  230 (1311)
T KOG1900|consen  161 FTGELSIFNTSFKISVDGVSVNCITYTENGRIFFAGRDG--NLYELVYQAEDGWFGSRCRKICLTKSVLSS--------L  230 (1311)
T ss_pred             ccCcccccccceeeecCCceEEEEEeccCCcEEEeecCC--CEEEEEEeccCchhhcccccccCchhHHHH--------h
Confidence              111      1222335568889988899999999888  555543211111111111111111100000        0


Q ss_pred             EEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCC
Q psy14511        388 KMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFP  436 (488)
Q Consensus       388 ~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~  436 (488)
                          ++  ..+.....+..+|..++.....+.+.+-+..|+|.+|++.+
T Consensus       231 ----vP--s~~~~~~~~~dpI~qi~ID~SR~IlY~lsek~~v~~Y~i~~  273 (1311)
T KOG1900|consen  231 ----VP--SLLSVPGSSKDPIRQITIDNSRNILYVLSEKGTVSAYDIGG  273 (1311)
T ss_pred             ----hh--hhhcCCCCCCCcceeeEeccccceeeeeccCceEEEEEccC
Confidence                00  11111135677999999988888999999999999999987

>PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A

Probab=92.32  E-value=11  Score=36.32  Aligned_cols=255  Identities=12%  Similarity=0.157  Sum_probs=119.7

Q ss_pred             CCceEEEeecCCeEEEEEcccCcc-cceeeccc-CceEEEEEEccCC-cEEEEec---CCeEEEEeccccCcCCCccccc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSD-YPTAITRE-GDVVCGLKWSPNG-RYLASGS---NNTVKIWDFRQLDAKRPQVNNQ   77 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~-~~~~~~~h-~~~V~~l~~sp~g-~~las~~---d~~i~vwd~~~~~~~~~~~~~~   77 (488)
                      ++..++.+..+|.+....+..... +....-+. ....+++.+-.+| .+|+.|+   |+.+.-|....   .+.+..+.
T Consensus       221 ~~~~~lL~~e~G~l~~l~l~~~~~~i~i~~~g~~~~~~s~l~~l~~g~d~lf~gs~~gds~l~~~~~~~---l~~~~~~~  297 (504)
T PF10433_consen  221 DGDRILLQDEDGDLYLLTLDNDGGSISITYLGTLCSIASSLTYLKNGGDYLFVGSEFGDSQLLQISLSN---LEVLDSLP  297 (504)
T ss_dssp             TSSEEEEEETTSEEEEEEEEEEEEEEEEEEEEE--S-ESEEEEESTT--EEEEEESSS-EEEEEEESES---EEEEEEE-
T ss_pred             CCCEEEEEeCCCeEEEEEEEECCCeEEEEEcCCcCChhheEEEEcCCCEEEEEEEecCCcEEEEEeCCC---cEEEEecc
Confidence            566777788999998888766442 21222233 4456677777776 2444444   77777776332   22332222


Q ss_pred             ccccceeEEEEecC----CC------eEEeeeCCcccceEEEEecCCCeeee--eeecCCCccccccccccccccceeEE
Q psy14511         78 CHLSAVKAIAWCPW----EP------TLLATGGGICDQTVRLWNSMNGKEKC--HVKTDSQQANDETISYREQKKRRHLS  145 (488)
Q Consensus        78 ~h~~~v~~l~~~~~----~~------~l~~~~~~~~d~~i~vwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (488)
                       .-++|.+++..+.    ..      .++++++.+.+|.+++..-  |-...  .......                   
T Consensus       298 -N~~Pi~D~~v~~~~~~~~~~~~~~~~lv~~sG~g~~gsL~~lr~--Gi~~~~~~~~~~~l-------------------  355 (504)
T PF10433_consen  298 -NWGPIVDFCVVDSSNSGQPSNPSSDQLVACSGAGKRGSLRILRN--GIGIEGLELASSEL-------------------  355 (504)
T ss_dssp             ----SEEEEEEE-TSSSSS-------EEEEEESSGGG-EEEEEEE--SBEEE--EEEEEEE-------------------
T ss_pred             -CcCCccceEEeccccCCCCcccccceEEEEECcCCCCcEEEEec--cCCceeeeeeccCC-------------------
Confidence             3478999888532    11      5666665556888888752  22221  1110000                   


Q ss_pred             EEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEEC
Q psy14511        146 FLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNT  225 (488)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~  225 (488)
                         .+    -..+|....                                         ....+.++..+....-+++.+
T Consensus       356 ---~~----v~~iW~l~~-----------------------------------------~~~~~~~lv~S~~~~T~vl~~  387 (504)
T PF10433_consen  356 ---PG----VTGIWTLKL-----------------------------------------SSSDHSYLVLSFPNETRVLQI  387 (504)
T ss_dssp             ---ST----EEEEEEE-S-----------------------------------------SSSSBSEEEEEESSEEEEEEE
T ss_pred             ---CC----ceEEEEeee-----------------------------------------cCCCceEEEEEcCCceEEEEE
Confidence               00    000000000                                         000134555555555556655


Q ss_pred             C---CCceEEEEecCCC--CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecc-ccccEEEEEecCCEEEE
Q psy14511        226 K---TNKTQLLVEYPTY--DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRT-HMHQVIAMCWNGNLLSC  299 (488)
Q Consensus       226 ~---~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~-~~~~v~~~~~~~~~l~~  299 (488)
                      .   ..+........+.  ....+.+-.+.  +..++=.  ....|++.+....+....+.. ....|.+.+.++..++.
T Consensus       388 ~~~d~~e~~~e~~~~~f~~~~~Tl~~~~~~--~~~ivQV--t~~~i~l~~~~~~~~~~~w~~~~~~~I~~a~~~~~~v~v  463 (504)
T PF10433_consen  388 SEGDDGEEVEEVEEDGFDTDEPTLAAGNVG--DGRIVQV--TPKGIRLIDLEDGKLTQEWKPPAGSIIVAASINDPQVLV  463 (504)
T ss_dssp             S----SSEEEEE---TS-SSS-EEEEEEET--TTEEEEE--ESSEEEEEESSSTSEEEEEE-TTS---SEEEESSSEEEE
T ss_pred             ecccCCcchhhhhhccCCCCCCCeEEEEcC--CCeEEEE--ecCeEEEEECCCCeEEEEEeCCCCCeEEEEEECCCEEEE
Confidence            3   2222211111110  12223222232  3344443  244588888777666655532 45567777778888888


Q ss_pred             eecCCeEEEEECcCCCccceeee----cCCccEEEEEEcc
Q psy14511        300 GTIGGNILHYDVRTHSDYPTAIT----REGDVVCGLKWSP  335 (488)
Q Consensus       300 ~~~dg~i~i~d~~~~~~~~~~~~----~~~~~i~~~~~s~  335 (488)
                      +..++.+..+.+...........    .....|.++..+|
T Consensus       464 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eis~l~i~p  503 (504)
T PF10433_consen  464 ALSGGELVYFELDDNKISVSDNDETILELDNEISCLSIEP  503 (504)
T ss_dssp             EE-TTEEEEEEEETTEEEEEEE----EE-SS-EEEEE---
T ss_pred             EEeCCcEEEEEEECCceeeeeeccccccCCCceEEEEeCC
Confidence            88899999998876542222221    1456678877766

...

>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast [])

Probab=92.24  E-value=1.4  Score=35.07  Aligned_cols=32  Identities=19%  Similarity=0.303  Sum_probs=26.5

Q ss_pred             ccEEEEEEcCCC------CEEEEEeCCCcEEEEecCCC
Q psy14511        406 ERILSAVLSPDQ------TCVAAASADETISIWNCFPR  437 (488)
Q Consensus       406 ~~v~~~~~s~~~------~~l~t~~~dg~v~iw~~~~~  437 (488)
                      ..+.+++|||-|      -+||+.+.+|.|.||.-...
T Consensus        86 ~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~~  123 (173)
T PF12657_consen   86 SQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPGN  123 (173)
T ss_pred             ccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCCC
Confidence            378999999953      37899999999999997754

The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].

>PF14727 PHTB1_N: PTHB1 N-terminus

Probab=92.06  E-value=10  Score=35.15  Aligned_cols=113  Identities=11%  Similarity=0.070  Sum_probs=63.6

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccc--eeec-ccCceEEEEEEcc-----CCcEEEEecCCeEEEEeccccCcC-----
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYP--TAIT-REGDVVCGLKWSP-----NGRYLASGSNNTVKIWDFRQLDAK-----   70 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~--~~~~-~h~~~V~~l~~sp-----~g~~las~~d~~i~vwd~~~~~~~-----   70 (488)
                      +...|++|+..|.++||+........  ..+. .-..+|..++.-+     +...||.-.-..+.||.+......     
T Consensus        36 ~~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~vY~v~~~~g~~~~g~  115 (418)
T PF14727_consen   36 GSDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAVLHPRKLSVYSVSLVDGTVEHGN  115 (418)
T ss_pred             CccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEEecCCEEEEEEEEecCCCcccCc
Confidence            45689999999999999996544221  1222 2345777776543     345777777889999988432211     


Q ss_pred             -CCccccccccc--ceeEEEEec----CCC-eEEeeeCCcccceEEEEecCCCeeee
Q psy14511         71 -RPQVNNQCHLS--AVKAIAWCP----WEP-TLLATGGGICDQTVRLWNSMNGKEKC  119 (488)
Q Consensus        71 -~~~~~~~~h~~--~v~~l~~~~----~~~-~l~~~~~~~~d~~i~vwd~~~~~~~~  119 (488)
                       ..+.....|.-  ....++.-|    .++ ++.+-+-   ||.+.+++-+.-...+
T Consensus       116 ~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~---DG~L~~feqe~~~f~~  169 (418)
T PF14727_consen  116 QYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSM---DGSLSFFEQESFAFSR  169 (418)
T ss_pred             EEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEec---CceEEEEeCCcEEEEE
Confidence             11111222322  122232222    223 4444444   9999999965544333

>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes

Probab=91.86  E-value=2.4  Score=35.63  Aligned_cols=133  Identities=13%  Similarity=0.177  Sum_probs=67.1

Q ss_pred             EEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCC--cEEEEECCcc--ee-ee----eeccccccEEEE
Q psy14511        220 VYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTE--YIDLWHEQEE--RL-IQ----KLRTHMHQVIAM  290 (488)
Q Consensus       220 v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~--~i~i~d~~~~--~~-~~----~~~~~~~~v~~~  290 (488)
                      -.+||+.+++.......   ....+.+-++.+||+.+.++|..+|  .+++++....  .+ ..    .+....=--+..
T Consensus        48 s~~yD~~tn~~rpl~v~---td~FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~~~RWYpT~~  124 (243)
T PF07250_consen   48 SVEYDPNTNTFRPLTVQ---TDTFCSGGAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQSGRWYPTAT  124 (243)
T ss_pred             EEEEecCCCcEEeccCC---CCCcccCcCCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceECcccccCCCccccce
Confidence            45799998876543321   4455566678899999999866554  4777775430  00 00    111100011122


Q ss_pred             Ee-cCCEEEEeecCCe-EEEEECcCCCcccee---eec-----CCccEEEEEEccCCcEEEEEecCeEEEEECCCC
Q psy14511        291 CW-NGNLLSCGTIGGN-ILHYDVRTHSDYPTA---ITR-----EGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQL  356 (488)
Q Consensus       291 ~~-~~~~l~~~~~dg~-i~i~d~~~~~~~~~~---~~~-----~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~  356 (488)
                      .. ||+.++.|+.... ..+|.-.........   +..     ...---.+...|+|++++.+..+ -.|||..+.
T Consensus       125 ~L~DG~vlIvGG~~~~t~E~~P~~~~~~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~~-s~i~d~~~n  199 (243)
T PF07250_consen  125 TLPDGRVLIVGGSNNPTYEFWPPKGPGPGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANRG-SIIYDYKTN  199 (243)
T ss_pred             ECCCCCEEEEeCcCCCcccccCCccCCCCceeeecchhhhccCccccCceEEEcCCCCEEEEEcCC-cEEEeCCCC
Confidence            22 8999998887742 344443221110110   100     00111234556777777666542 334565544

Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].

>PHA02790 Kelch-like protein; Provisional

Probab=91.79  E-value=12  Score=35.70  Aligned_cols=61  Identities=11%  Similarity=0.121  Sum_probs=32.3

Q ss_pred             CCceEEEeecCC-----eEEEEEcccCcccc-eeecccCceEEEEEEccCCcEEEEec-C--CeEEEEeccc
Q psy14511          4 NGNLLSCGTIGG-----NILHYDVRTHSDYP-TAITREGDVVCGLKWSPNGRYLASGS-N--NTVKIWDFRQ   66 (488)
Q Consensus         4 dg~~la~g~~dg-----~i~iwd~~~~~~~~-~~~~~h~~~V~~l~~sp~g~~las~~-d--~~i~vwd~~~   66 (488)
                      ++.++++|+.++     .+..||..++.-.. ..+........ ++ .-+|++.+.|+ +  ..+..||..+
T Consensus       271 ~~~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~~~-~v-~~~~~iYviGG~~~~~sve~ydp~~  340 (480)
T PHA02790        271 GEVVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLYAS-GV-PANNKLYVVGGLPNPTSVERWFHGD  340 (480)
T ss_pred             CCEEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCchhhcce-EE-EECCEEEEECCcCCCCceEEEECCC
Confidence            455667787543     56778877654211 11111111111 22 24677777776 3  4678888654

>COG1520 FOG: WD40-like repeat [Function unknown]

Probab=91.77  E-value=10  Score=34.76  Aligned_cols=106  Identities=11%  Similarity=0.039  Sum_probs=64.1

Q ss_pred             CCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecccc-c
Q psy14511        207 GYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHM-H  285 (488)
Q Consensus       207 ~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~-~  285 (488)
                      .++.++++..+|.|.-.|..++..+-...... ....+..-.+..+|+ ++++ +.++.+..+|..+++.+....... .
T Consensus        67 ~dg~v~~~~~~G~i~A~d~~~g~~~W~~~~~~-~~~~~~~~~~~~~G~-i~~g-~~~g~~y~ld~~~G~~~W~~~~~~~~  143 (370)
T COG1520          67 GDGTVYVGTRDGNIFALNPDTGLVKWSYPLLG-AVAQLSGPILGSDGK-IYVG-SWDGKLYALDASTGTLVWSRNVGGSP  143 (370)
T ss_pred             eCCeEEEecCCCcEEEEeCCCCcEEecccCcC-cceeccCceEEeCCe-EEEe-cccceEEEEECCCCcEEEEEecCCCe
Confidence            35677888889999999998887553322221 011222222333665 6667 788889999998888887776555 1


Q ss_pred             cEEE-EEecCCEEEEeecCCeEEEEECcCCC
Q psy14511        286 QVIA-MCWNGNLLSCGTIGGNILHYDVRTHS  315 (488)
Q Consensus       286 ~v~~-~~~~~~~l~~~~~dg~i~i~d~~~~~  315 (488)
                      .+.. .......+...+.++.++-.|..++.
T Consensus       144 ~~~~~~v~~~~~v~~~s~~g~~~al~~~tG~  174 (370)
T COG1520         144 YYASPPVVGDGTVYVGTDDGHLYALNADTGT  174 (370)
T ss_pred             EEecCcEEcCcEEEEecCCCeEEEEEccCCc
Confidence            1111 11133444444467888777777654

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=91.62  E-value=8.6  Score=37.95  Aligned_cols=102  Identities=15%  Similarity=0.212  Sum_probs=65.2

Q ss_pred             CCCc-EEEEECCCeEEEEECCC-------C----ce-------EEEEecCCCCCCceEEEEEc--CCCCeEEEEeCCCCc
Q psy14511        207 GYHD-TLAVALDTSVYTWNTKT-------N----KT-------QLLVEYPTYDNAYISCVAWK--PRTTDLAVTNTCTEY  265 (488)
Q Consensus       207 ~~~~-~~~~~~d~~v~iw~~~~-------~----~~-------~~~~~~~~~~~~~i~~~~~~--~~~~~l~~~~~~~~~  265 (488)
                      .+.. ++++..||.|.+|.+++       .    ..       ...+.+.  ....+.+++++  ...++||++ +....
T Consensus       112 g~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~--v~~SaWGLdIh~~~~~rlIAVS-sNs~~  188 (717)
T PF08728_consen  112 GGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR--VGASAWGLDIHDYKKSRLIAVS-SNSQE  188 (717)
T ss_pred             CCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEee--cCCceeEEEEEecCcceEEEEe-cCCce
Confidence            3444 45556999999997531       0    00       0011111  34578889998  778888888 88888


Q ss_pred             EEEEECCcc--ee-eeeeccccccEEEEEe-----cCC---EEEEeecCCeEEEEEC
Q psy14511        266 IDLWHEQEE--RL-IQKLRTHMHQVIAMCW-----NGN---LLSCGTIGGNILHYDV  311 (488)
Q Consensus       266 i~i~d~~~~--~~-~~~~~~~~~~v~~~~~-----~~~---~l~~~~~dg~i~i~d~  311 (488)
                      |.+|-....  +. ...-..+...|.+++|     ++.   .+++++-.|.+.+|++
T Consensus       189 VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I  245 (717)
T PF08728_consen  189 VTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI  245 (717)
T ss_pred             EEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence            888865431  11 1111136678888998     222   7888999999998887

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=91.30  E-value=1  Score=25.08  Aligned_cols=30  Identities=20%  Similarity=0.178  Sum_probs=20.2

Q ss_pred             eccccEEEEEEcCCCCEEEEEe-CC--CcEEEE
Q psy14511        403 IHQERILSAVLSPDQTCVAAAS-AD--ETISIW  432 (488)
Q Consensus       403 ~~~~~v~~~~~s~~~~~l~t~~-~d--g~v~iw  432 (488)
                      .....-....|||||+.|+-++ .+  |.-.||
T Consensus         6 ~~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy   38 (39)
T PF07676_consen    6 NSPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY   38 (39)
T ss_dssp             -SSSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred             cCCccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence            3455678899999999888766 34  555555

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=91.13  E-value=12  Score=34.29  Aligned_cols=57  Identities=9%  Similarity=-0.033  Sum_probs=34.4

Q ss_pred             eecCCCCEEEEEccCC------------------CCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCC
Q psy14511        368 KLKREGRELVTSHGKQ------------------DCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASAD  426 (488)
Q Consensus       368 ~~~~~~~~l~~~~g~~------------------~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~d  426 (488)
                      .|.|||.+.++. |..                  .+.+.-++..+++......++ .....++|+|+|+++++-..+
T Consensus       130 ~~gpDG~LYv~~-G~~~~~~~~~~~~~~~~~~~~~g~i~r~~pdg~~~e~~a~G~-rnp~Gl~~d~~G~l~~tdn~~  204 (367)
T TIGR02604       130 AWGPDGWLYFNH-GNTLASKVTRPGTSDESRQGLGGGLFRYNPDGGKLRVVAHGF-QNPYGHSVDSWGDVFFCDNDD  204 (367)
T ss_pred             eECCCCCEEEec-ccCCCceeccCCCccCcccccCceEEEEecCCCeEEEEecCc-CCCccceECCCCCEEEEccCC
Confidence            788998776654 321                  145666666554432222333 335789999999988764433

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>smart00036 CNH Domain found in NIK1-like kinases, mouse citron and yeast ROM1, ROM2

Probab=90.96  E-value=11  Score=33.42  Aligned_cols=61  Identities=15%  Similarity=0.080  Sum_probs=43.1

Q ss_pred             CCceEEEeecCCeEEEEEcccC-cccceeecccCceEEEEEEccCCcEEEEecCCe--EEEEecccc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTH-SDYPTAITREGDVVCGLKWSPNGRYLASGSNNT--VKIWDFRQL   67 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~-~~~~~~~~~h~~~V~~l~~sp~g~~las~~d~~--i~vwd~~~~   67 (488)
                      ++++|+.|+.+|. .+.+.... ....  ...+...|+++...+.-+.|++-+++.  ++++++...
T Consensus        12 ~~~~lL~GTe~Gl-y~~~~~~~~~~~~--kl~~~~~v~q~~v~~~~~lLi~Lsgk~~~L~~~~L~~L   75 (302)
T smart00036       12 DGKWLLVGTEEGL-YVLNISDQPGTLE--KLIGRRSVTQIWVLEENNVLLMISGKKPQLYSHPLSAL   75 (302)
T ss_pred             CCcEEEEEeCCce-EEEEcccCCCCeE--EecCcCceEEEEEEhhhCEEEEEeCCcceEEEEEHHHh
Confidence            4468999999984 44555542 2122  224566899999999999888877555  999999653

Unpublished observations.

>COG5290 IkappaB kinase complex, IKAP component [Transcription]

Probab=90.82  E-value=9.6  Score=37.54  Aligned_cols=57  Identities=30%  Similarity=0.270  Sum_probs=34.1

Q ss_pred             cEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEE
Q psy14511        210 DTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWH  270 (488)
Q Consensus       210 ~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d  270 (488)
                      .+++.+..+.+.+|...+-..-.....   .-..+.-+.|+|....-+.- ...+.|..-+
T Consensus       308 ~vlav~~~n~~~lwttkNyhWYLK~e~---~ip~~s~vkwhpe~~nTl~f-~d~~~I~~V~  364 (1243)
T COG5290         308 TVLAVAEGNLLKLWTTKNYHWYLKVER---QIPGISYVKWHPEEKNTLLF-RDGERILRVF  364 (1243)
T ss_pred             HHHHHhhcceEEEEEccceEEEEEEee---cCCCcceeeeccccCcEEEE-ecCCeEEEEE
Confidence            456667788999998777654433333   33346778999976443333 2344444433

>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins

Probab=90.42  E-value=16  Score=34.37  Aligned_cols=31  Identities=19%  Similarity=0.540  Sum_probs=25.6

Q ss_pred             ccEEEEEEcCCCCEEEEEeCCCcEEEEecCC
Q psy14511        406 ERILSAVLSPDQTCVAAASADETISIWNCFP  436 (488)
Q Consensus       406 ~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~  436 (488)
                      ..|..++..+..+.|++.+.+|.|.+|++..
T Consensus       190 ~~I~~v~~d~~r~~ly~l~~~~~Iq~w~l~~  220 (422)
T PF08801_consen  190 PKIVQVAVDPSRRLLYTLTSDGSIQVWDLGP  220 (422)
T ss_dssp             --EEEEEEETTTTEEEEEESSE-EEEEEE-S
T ss_pred             hceeeEEecCCcCEEEEEeCCCcEEEEEEeC
Confidence            3499999999999999999999999999985

RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.

>KOG2063|consensus

Probab=90.19  E-value=24  Score=36.09  Aligned_cols=65  Identities=17%  Similarity=0.229  Sum_probs=46.4

Q ss_pred             CceEEEeecCCeEEEEEcccCcccc--ee------e--cccCceEEEEEEccCCcEEEEecCCeEEEEeccccCc
Q psy14511          5 GNLLSCGTIGGNILHYDVRTHSDYP--TA------I--TREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDA   69 (488)
Q Consensus         5 g~~la~g~~dg~i~iwd~~~~~~~~--~~------~--~~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~   69 (488)
                      |+.|..|+.+|.+.+|.+.......  ..      +  .-+..+|..+...+.-.++..-+|+.|.++++.+.+.
T Consensus        26 ~~~l~vGt~~G~L~lY~i~~~~~~~~~~~~~~~~~~~~~~~kk~i~~l~~~~~~~~ll~l~dsqi~~~~l~~~~~  100 (877)
T KOG2063|consen   26 GNHLYVGTRDGDLYLYSIYERGNPESVELVTETVKFEKEFSKKPINKLLVCASLELLLILSDSQIAVHKLPELEP  100 (877)
T ss_pred             CCEEEEEcCCCcEEEEeccccccccchhhhcchhHHhhhhccchhHHHhhcchhcchheecCCcceeeecCcccc
Confidence            6788889999999999987643110  11      1  1235677777777777778777899999999876544

>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat

Probab=90.13  E-value=1.1  Score=25.27  Aligned_cols=40  Identities=15%  Similarity=0.130  Sum_probs=26.2

Q ss_pred             CCCCEEEEEe-CCCcEEEEecCCCCccccccccCCcceEEe
Q psy14511        415 PDQTCVAAAS-ADETISIWNCFPRDKKRKARQVGSGSSLEF  454 (488)
Q Consensus       415 ~~~~~l~t~~-~dg~v~iw~~~~~~~~~~~~~~~~v~~~~~  454 (488)
                      |++++|.++. .++.|.++|..+++.............++|
T Consensus         1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~vg~~P~~i~~   41 (42)
T TIGR02276         1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPVGGYPFGVAV   41 (42)
T ss_pred             CCCCEEEEEeCCCCEEEEEECCCCeEEEEEECCCCCceEEe
Confidence            5777666655 578999999988776654444444444444

This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).

>KOG3630|consensus

Probab=89.76  E-value=6.8  Score=40.24  Aligned_cols=114  Identities=16%  Similarity=0.115  Sum_probs=69.5

Q ss_pred             CCCceEEEEEcCCCCeEEEEe-CCCCcEEEEECCcceee-----eeeccc------cccEEEEEecC---CEEEEeecCC
Q psy14511        240 DNAYISCVAWKPRTTDLAVTN-TCTEYIDLWHEQEERLI-----QKLRTH------MHQVIAMCWNG---NLLSCGTIGG  304 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~-~~~~~i~i~d~~~~~~~-----~~~~~~------~~~v~~~~~~~---~~l~~~~~dg  304 (488)
                      ...++..+...+|+...++.. +.+-.|..||++.-...     ..+..|      ..-..++.|+.   ...+....|+
T Consensus        99 k~~pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dl  178 (1405)
T KOG3630|consen   99 KEIPIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDL  178 (1405)
T ss_pred             ccccceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhcccc
Confidence            344566777778876655542 33447888998753221     111111      22234555543   4456677888


Q ss_pred             eEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEec-CeEEEEECC
Q psy14511        305 NILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN-NTVKIWDFR  354 (488)
Q Consensus       305 ~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d-~~i~iwd~~  354 (488)
                      .|++..+.........+ ......++++|+|.|+.++.|.. |++.-|...
T Consensus       179 sl~V~~~~~~~~~v~s~-p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~  228 (1405)
T KOG3630|consen  179 SLRVKSTKQLAQNVTSF-PVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPS  228 (1405)
T ss_pred             chhhhhhhhhhhhhccc-CcccceeeEEeccccceeeEecCCCeEEEeecc
Confidence            88888776543223222 23345789999999999999985 888777644

>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal

Probab=89.74  E-value=6.8  Score=29.19  Aligned_cols=103  Identities=20%  Similarity=0.217  Sum_probs=62.2

Q ss_pred             EEEcCCCCeEEEEeCCCCcEEEEECCcce--------eeeeeccccccEEEEEe---c----CCEEEEeecCCeEEEEEC
Q psy14511        247 VAWKPRTTDLAVTNTCTEYIDLWHEQEER--------LIQKLRTHMHQVIAMCW---N----GNLLSCGTIGGNILHYDV  311 (488)
Q Consensus       247 ~~~~~~~~~l~~~~~~~~~i~i~d~~~~~--------~~~~~~~~~~~v~~~~~---~----~~~l~~~~~dg~i~i~d~  311 (488)
                      -.|......|+++ +..|+|.|++.....        .+..+ .....|++++-   +    ...|+.|+ ...+..||+
T Consensus         4 GkfDG~~pcL~~a-T~~gKV~IH~ph~~~~~~~~~~~~i~~L-Nin~~italaaG~l~~~~~~D~LliGt-~t~llaYDV   80 (136)
T PF14781_consen    4 GKFDGVHPCLACA-TTGGKVFIHNPHERGQRTGRQDSDISFL-NINQEITALAAGRLKPDDGRDCLLIGT-QTSLLAYDV   80 (136)
T ss_pred             EEeCCCceeEEEE-ecCCEEEEECCCccccccccccCceeEE-ECCCceEEEEEEecCCCCCcCEEEEec-cceEEEEEc
Confidence            3455566677777 788899999765432        22223 24556777755   2    35566655 456899999


Q ss_pred             cCCCccceeeecCCccEEEEEEcc----CCcEEEEEecCeEEEEECC
Q psy14511        312 RTHSDYPTAITREGDVVCGLKWSP----NGRYLASGSNNTVKIWDFR  354 (488)
Q Consensus       312 ~~~~~~~~~~~~~~~~i~~~~~s~----~~~~l~~~~d~~i~iwd~~  354 (488)
                      .+.....  .+.-.+.++++.+-.    +..++++|++..|.-||..
T Consensus        81 ~~N~d~F--yke~~DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~  125 (136)
T PF14781_consen   81 ENNSDLF--YKEVPDGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDYE  125 (136)
T ss_pred             ccCchhh--hhhCccceeEEEEEecCCCCCcEEEECceEEEEEeCCC
Confidence            8764322  233335577776632    3456666666666666654

>PF14727 PHTB1_N: PTHB1 N-terminus

Probab=89.58  E-value=17  Score=33.65  Aligned_cols=59  Identities=10%  Similarity=0.100  Sum_probs=41.0

Q ss_pred             CcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECC
Q psy14511        209 HDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQ  272 (488)
Q Consensus       209 ~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~  272 (488)
                      +.+.+-+.||.+.+|+-+.-.....+..    ---...+.|.+....++++ +.+..+..|...
T Consensus       146 ~~IcVQS~DG~L~~feqe~~~f~~~lp~----~llPgPl~Y~~~tDsfvt~-sss~~l~~Yky~  204 (418)
T PF14727_consen  146 DFICVQSMDGSLSFFEQESFAFSRFLPD----FLLPGPLCYCPRTDSFVTA-SSSWTLECYKYQ  204 (418)
T ss_pred             eEEEEEecCceEEEEeCCcEEEEEEcCC----CCCCcCeEEeecCCEEEEe-cCceeEEEecHH
Confidence            4566677999999999776554333332    2223356788888889988 888888888653

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=89.11  E-value=14  Score=34.51  Aligned_cols=101  Identities=19%  Similarity=0.146  Sum_probs=60.0

Q ss_pred             CcEEEEECCCeEEEEECCCCc-eEEEEecCCC-CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecccccc
Q psy14511        209 HDTLAVALDTSVYTWNTKTNK-TQLLVEYPTY-DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQ  286 (488)
Q Consensus       209 ~~~~~~~~d~~v~iw~~~~~~-~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~  286 (488)
                      .+.+++-.+..|.-.|.+-.. .+...+...+ ......+..-. ...+++++ +..|.|++||--..+....+++....
T Consensus       528 eqtlvGlS~~svFrIDPR~~gNKi~v~esKdY~tKn~Fss~~tT-esGyIa~a-s~kGDirLyDRig~rAKtalP~lG~a  605 (776)
T COG5167         528 EQTLVGLSDYSVFRIDPRARGNKIKVVESKDYKTKNKFSSGMTT-ESGYIAAA-SRKGDIRLYDRIGKRAKTALPGLGDA  605 (776)
T ss_pred             cceEEeecccceEEecccccCCceeeeeehhccccccccccccc-cCceEEEe-cCCCceeeehhhcchhhhcCcccccc
Confidence            456666677777777765332 2222222111 12233333333 34589999 99999999996554444456666677


Q ss_pred             EEEEEe--cCCEEEEeecCCeEEEEECc
Q psy14511        287 VIAMCW--NGNLLSCGTIGGNILHYDVR  312 (488)
Q Consensus       287 v~~~~~--~~~~l~~~~~dg~i~i~d~~  312 (488)
                      |..+..  +|+++++.+. ..+.+-|++
T Consensus       606 Ik~idvta~Gk~ilaTCk-~yllL~d~~  632 (776)
T COG5167         606 IKHIDVTANGKHILATCK-NYLLLTDVP  632 (776)
T ss_pred             eeeeEeecCCcEEEEeec-ceEEEEecc
Confidence            777666  7887776654 456666654

>PF11725 AvrE: Pathogenicity factor; InterPro: IPR021085 This family is secreted by Gram-negative Gammaproteobacteria such as Pseudomonas syringae of tomato and Erwinia amylovora (Fire blight bacteria), amongst others

Probab=88.92  E-value=40  Score=36.89  Aligned_cols=135  Identities=10%  Similarity=0.045  Sum_probs=83.6

Q ss_pred             ECCCeEEEEECCCCceEEEEe-----cC-C-------CCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECC----cceee
Q psy14511        215 ALDTSVYTWNTKTNKTQLLVE-----YP-T-------YDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQ----EERLI  277 (488)
Q Consensus       215 ~~d~~v~iw~~~~~~~~~~~~-----~~-~-------~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~----~~~~~  277 (488)
                      -.+|.|..||-.+......-.     +. +       -..+.+..+.+++....++-+  .+..+.+=-.+    -+..+
T Consensus       620 L~~G~i~~wD~ttq~W~~~~~kd~~~L~RG~D~~AYVLk~G~vk~l~i~~~~~~~~~g--~~~~~a~~~~r~~~e~G~~l  697 (1774)
T PF11725_consen  620 LQDGKIQYWDSTTQCWKDAGVKDIDQLKRGLDGNAYVLKDGKVKRLSINQEHPSIAHG--DNNVFALPQRRNKVELGDAL  697 (1774)
T ss_pred             eccceEeeecCcchhhhhccCcCHHHHhccccCCceEecCCceeeeecccCCCccccC--CCcccccccccCCCCCCccc
Confidence            357999999987654322111     00 0       034567777777766666554  22222211111    12222


Q ss_pred             eeeccccccEEEEEe-cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECC
Q psy14511        278 QKLRTHMHQVIAMCW-NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFR  354 (488)
Q Consensus       278 ~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~  354 (488)
                      .-+.  ...|.+++. +++.+++....|.+.... ..+........+-.+.|..++.....++.|...+|.++-.+-.
T Consensus       698 ~Gl~--~~~i~a~Avv~~~~fvald~qg~lt~h~-k~g~p~~l~~~gl~G~ik~l~lD~~~nL~Alt~~G~Lf~~~k~  772 (1774)
T PF11725_consen  698 EGLE--DRVITAFAVVNDNKFVALDDQGDLTAHQ-KPGRPVPLSRPGLSGEIKDLALDEKQNLYALTSTGELFRLPKE  772 (1774)
T ss_pred             cCCC--cCcceeEEEEcCCceEEeccCCcccccc-CCCCCccCCCCCCCcchhheeeccccceeEecCCCceeecCHH
Confidence            2222  556788888 889999999999999988 5444333334455788999999998888888888887665543

It is an essential pathogenicity factor of approximately 198 kDa. Its injection into the host-plant is dependent upon the bacterial type III or Hrp secretion system []. The family is long and carries a number of predicted functional regions, including an ERMS or endoplasmic reticulum membrane retention signal at both the C- and the N-termini, a leucine-zipper motif from residues 539-560, and a nuclear localisation signal at 1358-1361. This conserved AvrE-family of effectors is among the few that are required for full virulence of many phytopathogenic pseudomonads, erwinias and pantoeas [].

>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast [])

Probab=88.20  E-value=5.3  Score=31.86  Aligned_cols=29  Identities=28%  Similarity=0.457  Sum_probs=22.5

Q ss_pred             cEEEEEEccCC------cEEEEEe-cCeEEEEECCC
Q psy14511        327 VVCGLKWSPNG------RYLASGS-NNTVKIWDFRQ  355 (488)
Q Consensus       327 ~i~~~~~s~~~------~~l~~~~-d~~i~iwd~~~  355 (488)
                      .+..++|||.|      .+||+.+ ++.+.||....
T Consensus        87 ~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~  122 (173)
T PF12657_consen   87 QVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG  122 (173)
T ss_pred             cEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence            68899999955      3666666 59999998764

The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].

>KOG4460|consensus

Probab=87.67  E-value=7.5  Score=36.21  Aligned_cols=83  Identities=17%  Similarity=0.153  Sum_probs=51.2

Q ss_pred             ceEEEEEEccCCcEEEEec-CCeEEEEe-----c----cccCcC---------CCcccccccccceeEEEEecCC---Ce
Q psy14511         37 DVVCGLKWSPNGRYLASGS-NNTVKIWD-----F----RQLDAK---------RPQVNNQCHLSAVKAIAWCPWE---PT   94 (488)
Q Consensus        37 ~~V~~l~~sp~g~~las~~-d~~i~vwd-----~----~~~~~~---------~~~~~~~~h~~~v~~l~~~~~~---~~   94 (488)
                      -.|..+..++.|..+|-++ +|.+.++=     -    +.++..         ..+.+-. ..-.+...+|+|+.   ..
T Consensus       104 feV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss-~~ltl~Qa~WHP~S~~D~h  182 (741)
T KOG4460|consen  104 FEVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSS-TSLTLKQAAWHPSSILDPH  182 (741)
T ss_pred             EEEEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccC-CceeeeeccccCCccCCce
Confidence            4688888999999888777 77655432     1    111100         0111111 11246678899975   46


Q ss_pred             EEeeeCCcccceEEEEecCCCeeeeeeec
Q psy14511         95 LLATGGGICDQTVRLWNSMNGKEKCHVKT  123 (488)
Q Consensus        95 l~~~~~~~~d~~i~vwd~~~~~~~~~~~~  123 (488)
                      |+...+   |+.|++||+.....+....+
T Consensus       183 L~iL~s---dnviRiy~lS~~telylqpg  208 (741)
T KOG4460|consen  183 LVLLTS---DNVIRIYSLSEPTELYLQPG  208 (741)
T ss_pred             EEEEec---CcEEEEEecCCcchhhccCC
Confidence            666666   99999999987776644433

>PLN00033 photosystem II stability/assembly factor; Provisional

Probab=87.41  E-value=24  Score=32.63  Aligned_cols=103  Identities=7%  Similarity=-0.023  Sum_probs=59.0

Q ss_pred             CCccEEEEEEccCCcEEEEEecCeEEEEECCCCC-----CCcccc-------eeeeeecCCCCEEEEEccCCCCeEEEEe
Q psy14511        324 EGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLD-----AKRPLG-------LIVPKLKREGRELVTSHGKQDCSLKMWE  391 (488)
Q Consensus       324 ~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~-----~~~~~~-------~~~~~~~~~~~~l~~~~g~~~~~i~i~d  391 (488)
                      ....+.++.+.+++..++++..|.+..= ...+.     ......       .....|.+++..+++   +..|.+....
T Consensus       279 ~~~~l~~v~~~~dg~l~l~g~~G~l~~S-~d~G~~~~~~~f~~~~~~~~~~~l~~v~~~~d~~~~a~---G~~G~v~~s~  354 (398)
T PLN00033        279 SARRIQNMGWRADGGLWLLTRGGGLYVS-KGTGLTEEDFDFEEADIKSRGFGILDVGYRSKKEAWAA---GGSGILLRST  354 (398)
T ss_pred             CccceeeeeEcCCCCEEEEeCCceEEEe-cCCCCcccccceeecccCCCCcceEEEEEcCCCcEEEE---ECCCcEEEeC
Confidence            3456889999999999988877665432 22221     001111       111256777777766   4456555443


Q ss_pred             CCCcceeEEEe---eccccEEEEEEcCCCCEEEEEeCCCcEEEE
Q psy14511        392 YPRLHLIEELK---IHQERILSAVLSPDQTCVAAASADETISIW  432 (488)
Q Consensus       392 ~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw  432 (488)
                       ..|+.-....   .-....+.+.|.++++.+++| .+|.|.-|
T Consensus       355 -D~G~tW~~~~~~~~~~~~ly~v~f~~~~~g~~~G-~~G~il~~  396 (398)
T PLN00033        355 -DGGKSWKRDKGADNIAANLYSVKFFDDKKGFVLG-NDGVLLRY  396 (398)
T ss_pred             -CCCcceeEccccCCCCcceeEEEEcCCCceEEEe-CCcEEEEe
Confidence             3343322222   224568899998877666655 67776554

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=87.19  E-value=22  Score=32.00  Aligned_cols=218  Identities=10%  Similarity=0.017  Sum_probs=106.6

Q ss_pred             ceEEEEEcCCCCeEEEEeCCCCcEEEEECCcce--eeeee----ccccccEEEEEecC-----CEEEEeecC--------
Q psy14511        243 YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEER--LIQKL----RTHMHQVIAMCWNG-----NLLSCGTIG--------  303 (488)
Q Consensus       243 ~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~--~~~~~----~~~~~~v~~~~~~~-----~~l~~~~~d--------  303 (488)
                      ..+.|+|.|+|+.+++-  ..|.|++++.....  .+..+    .........+++++     ..|......        
T Consensus         3 ~P~~~a~~pdG~l~v~e--~~G~i~~~~~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~~   80 (331)
T PF07995_consen    3 NPRSMAFLPDGRLLVAE--RSGRIWVVDKDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGDN   80 (331)
T ss_dssp             SEEEEEEETTSCEEEEE--TTTEEEEEETTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSSE
T ss_pred             CceEEEEeCCCcEEEEe--CCceEEEEeCCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCCc
Confidence            46789999998776654  69999999933322  22222    23455678888844     455444331        


Q ss_pred             -CeEEEEECcCCC-------ccceeeec---CCccEEEEEEccCCcEEEEEec-C-------------eEEEEECCCCCC
Q psy14511        304 -GNILHYDVRTHS-------DYPTAITR---EGDVVCGLKWSPNGRYLASGSN-N-------------TVKIWDFRQLDA  358 (488)
Q Consensus       304 -g~i~i~d~~~~~-------~~~~~~~~---~~~~i~~~~~s~~~~~l~~~~d-~-------------~i~iwd~~~~~~  358 (488)
                       ..|.-|......       ........   ....-..|+|.|||.+.++.++ +             .|.-.+.. +..
T Consensus        81 ~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~~~~~~~~~~~~~~G~ilri~~d-G~~  159 (331)
T PF07995_consen   81 DNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDGGNDDNAQDPNSLRGKILRIDPD-GSI  159 (331)
T ss_dssp             EEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-TTTGGGGCSTTSSTTEEEEEETT-SSB
T ss_pred             ceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCCCCcccccccccccceEEEeccc-CcC
Confidence             234444444321       11112222   2233567999999977776553 2             23333322 110


Q ss_pred             C--c--------cccee--------eeeecCC-CCEEEEEccCCCCeEEEEeCCCc------------------------
Q psy14511        359 K--R--------PLGLI--------VPKLKRE-GRELVTSHGKQDCSLKMWEYPRL------------------------  395 (488)
Q Consensus       359 ~--~--------~~~~~--------~~~~~~~-~~~l~~~~g~~~~~i~i~d~~~~------------------------  395 (488)
                      .  .        ....+        -.+|.|. |++.++-.|. +..=.|--+..+                        
T Consensus       160 p~dnP~~~~~~~~~~i~A~GlRN~~~~~~d~~tg~l~~~d~G~-~~~dein~i~~G~nYGWP~~~~~~~~~~~~~~~~~~  238 (331)
T PF07995_consen  160 PADNPFVGDDGADSEIYAYGLRNPFGLAFDPNTGRLWAADNGP-DGWDEINRIEPGGNYGWPYCEGGPKYSGPPIGDAPS  238 (331)
T ss_dssp             -TTSTTTTSTTSTTTEEEE--SEEEEEEEETTTTEEEEEEE-S-SSSEEEEEE-TT-B--TTTBSSSCSTTSS-ECTGSS
T ss_pred             CCCCccccCCCceEEEEEeCCCccccEEEECCCCcEEEEccCC-CCCcEEEEeccCCcCCCCCCcCCCCCCCCccccccC
Confidence            0  0        01111        1188888 6666654332 221122111111                        


Q ss_pred             -----ceeEEEeeccccEEEEEEcC-------CCCEEEEEeCCCcEEEEecCCCCcc----cc-ccccCCcceEEeecCC
Q psy14511        396 -----HLIEELKIHQERILSAVLSP-------DQTCVAAASADETISIWNCFPRDKK----RK-ARQVGSGSSLEFAILK  458 (488)
Q Consensus       396 -----~~~~~~~~~~~~v~~~~~s~-------~~~~l~t~~~dg~v~iw~~~~~~~~----~~-~~~~~~v~~~~~s~~~  458 (488)
                           .++..+..| ..+..+.|-.       +|.++++.-..+.|....+.+....    .. ......+..+++.|||
T Consensus       239 ~~~~~~P~~~~~~~-~ap~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~pDG  317 (331)
T PF07995_consen  239 CPGFVPPVFAYPPH-SAPTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQGPDG  317 (331)
T ss_dssp             -TTS---SEEETTT---EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEETTS
T ss_pred             CCCcCccceeecCc-cccCceEEECCccCccccCcEEEecCCCCEEEEEeeecCCCccceEEccccCCCCceEEEEcCCC
Confidence                 122333333 4566777754       3456666655677877777644332    11 2233467889999988


Q ss_pred             CceEEEE
Q psy14511        459 QPVSLTA  465 (488)
Q Consensus       459 ~~~~~~~  465 (488)
                      ..+....
T Consensus       318 ~Lyv~~d  324 (331)
T PF07995_consen  318 ALYVSDD  324 (331)
T ss_dssp             EEEEEE-
T ss_pred             eEEEEEC
Confidence            7765443

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>KOG1900|consensus

Probab=86.95  E-value=17  Score=38.20  Aligned_cols=72  Identities=11%  Similarity=0.227  Sum_probs=48.9

Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECC----cc---e-e----------------eeeec-cccccEEEEEec-
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQ----EE---R-L----------------IQKLR-THMHQVIAMCWN-  293 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~----~~---~-~----------------~~~~~-~~~~~v~~~~~~-  293 (488)
                      ....++|+....+|+.+++|  .||.  +|.+.    .+   + +                +..+. .+..+|..+..| 
T Consensus       177 dg~~V~~I~~t~nGRIF~~G--~dg~--lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~dpI~qi~ID~  252 (1311)
T KOG1900|consen  177 DGVSVNCITYTENGRIFFAG--RDGN--LYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKDPIRQITIDN  252 (1311)
T ss_pred             CCceEEEEEeccCCcEEEee--cCCC--EEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCCCCcceeeEecc
Confidence            45678999988888777766  6664  44431    10   1 1                11122 456789999995 


Q ss_pred             -CCEEEEeecCCeEEEEECcCCC
Q psy14511        294 -GNLLSCGTIGGNILHYDVRTHS  315 (488)
Q Consensus       294 -~~~l~~~~~dg~i~i~d~~~~~  315 (488)
                       -+.+.+-++.|.|.+||+....
T Consensus       253 SR~IlY~lsek~~v~~Y~i~~~G  275 (1311)
T KOG1900|consen  253 SRNILYVLSEKGTVSAYDIGGNG  275 (1311)
T ss_pred             ccceeeeeccCceEEEEEccCCC
Confidence             3678888999999999998743

>KOG2247|consensus

Probab=86.55  E-value=0.12  Score=46.82  Aligned_cols=131  Identities=14%  Similarity=0.121  Sum_probs=88.1

Q ss_pred             EEEEccCCcEEEEEe-cCeEEEEECCCCCCCccccee---eeeecCCCCEEEEEccCCCCeEEEEeCCCcc--eeEEEee
Q psy14511        330 GLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLI---VPKLKREGRELVTSHGKQDCSLKMWEYPRLH--LIEELKI  403 (488)
Q Consensus       330 ~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~--~~~~~~~  403 (488)
                      ...|-|.+.-++.++ +..+..||-............   --+|..++..+++. ....+.+++||+.+..  .+..-..
T Consensus        39 ~~~w~~e~~nlavaca~tiv~~YD~agq~~le~n~tg~aldm~wDkegdvlavl-Aek~~piylwd~n~eytqqLE~gg~  117 (615)
T KOG2247|consen   39 IHRWRPEGHNLAVACANTIVIYYDKAGQVILELNPTGKALDMAWDKEGDVLAVL-AEKTGPIYLWDVNSEYTQQLESGGT  117 (615)
T ss_pred             eeeEecCCCceehhhhhhHHHhhhhhcceecccCCchhHhhhhhccccchhhhh-hhcCCCeeechhhhhhHHHHhccCc
Confidence            456777665566655 677888886533211111111   12777788777765 5678889999996532  1111111


Q ss_pred             ccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcccccc-ccCCcceEEeecCCCceEE
Q psy14511        404 HQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKAR-QVGSGSSLEFAILKQPVSL  463 (488)
Q Consensus       404 ~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~~~-~~~~v~~~~~s~~~~~~~~  463 (488)
                      |...  -+.|++-...++.+-..|.+.|++-.+.+.....+ |..++.+.++.+-+..+..
T Consensus       118 ~s~s--ll~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av~lEd~vil~  176 (615)
T KOG2247|consen  118 SSKS--LLAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAVTLEDYVILC  176 (615)
T ss_pred             chHH--HHhhccCCccccccccccceEEEeccchhhhhhhcccccceeEEEecccceeeec
Confidence            2222  27899999999999999999999998887775555 8899999999997776644

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=86.36  E-value=41  Score=34.27  Aligned_cols=99  Identities=13%  Similarity=0.093  Sum_probs=59.6

Q ss_pred             CCeEEEEECCCCceEEEEecCCCC------CC--------ce-EEEEEcCCCCeEEEEe-----------------CCCC
Q psy14511        217 DTSVYTWNTKTNKTQLLVEYPTYD------NA--------YI-SCVAWKPRTTDLAVTN-----------------TCTE  264 (488)
Q Consensus       217 d~~v~iw~~~~~~~~~~~~~~~~~------~~--------~i-~~~~~~~~~~~l~~~~-----------------~~~~  264 (488)
                      +|.|+-+|.++|+..-.+....+.      .+        .+ ..+++.++...++...                 ...+
T Consensus       335 ~G~I~A~Da~TGkl~W~~~~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~~r~~~~n~y~~  414 (764)
T TIGR03074       335 SGVIRAFDVNTGALVWAWDPGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGGDRTPADEKYSS  414 (764)
T ss_pred             CcEEEEEECCCCcEeeEEecCCCCcccCCCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccccccCCccccCcccccc
Confidence            578999999998876555421100      00        11 2345666655555531                 1134


Q ss_pred             cEEEEECCcceeeeeeccccc-----------cEEEEEe-cCC---EEEEeecCCeEEEEECcCCC
Q psy14511        265 YIDLWHEQEERLIQKLRTHMH-----------QVIAMCW-NGN---LLSCGTIGGNILHYDVRTHS  315 (488)
Q Consensus       265 ~i~i~d~~~~~~~~~~~~~~~-----------~v~~~~~-~~~---~l~~~~~dg~i~i~d~~~~~  315 (488)
                      .|.-.|.++++....++....           .+..+.. +|+   .++.++.+|.+++.|.++++
T Consensus       415 slvALD~~TGk~~W~~Q~~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~  480 (764)
T TIGR03074       415 SLVALDATTGKERWVFQTVHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGE  480 (764)
T ss_pred             eEEEEeCCCCceEEEecccCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCC
Confidence            566678888888777655221           1223333 453   78899999999999988765

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]

Probab=86.25  E-value=8.3  Score=35.19  Aligned_cols=142  Identities=12%  Similarity=0.085  Sum_probs=85.9

Q ss_pred             eeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcc-c-ce-------eee---eecCCCCEEEEEccCCCCeE
Q psy14511        320 AITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRP-L-GL-------IVP---KLKREGRELVTSHGKQDCSL  387 (488)
Q Consensus       320 ~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~-~-~~-------~~~---~~~~~~~~l~~~~g~~~~~i  387 (488)
                      .+......+..+-..|||+.+..-+..++.++++.+...... + ..       .+.   ..-..|..+++  +..||.|
T Consensus       215 ~L~~~~~~v~qllL~Pdg~~LYv~~g~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg~SLLv--~~~dG~v  292 (733)
T COG4590         215 LLSVPFSDVSQLLLTPDGKTLYVRTGSELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLSGGFSLLV--VHEDGLV  292 (733)
T ss_pred             hcCCCccchHhhEECCCCCEEEEecCCeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHhCceeEEE--EcCCCce
Confidence            344455667788899999999988878899998876432211 1 10       011   22234556666  6788888


Q ss_pred             EEE-eCCC-cce----eEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccccccccCCcceEEeecCCCce
Q psy14511        388 KMW-EYPR-LHL----IEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKARQVGSGSSLEFAILKQPV  461 (488)
Q Consensus       388 ~i~-d~~~-~~~----~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~~~~~~~v~~~~~s~~~~~~  461 (488)
                      .-| |+.. +.+    ++.++-...++..+.--.+.+-+++-+..|++.++.-...+..-....-.....+++||.+.++
T Consensus       293 sQWFdvr~~~~p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL~~~~~~~~~~~~~Sp~~~~L  372 (733)
T COG4590         293 SQWFDVRRDGQPHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLLFERAYQAPQLVAMSPNQAYL  372 (733)
T ss_pred             eeeeeeecCCCCcceeeeccccCcccceeeccccccceEEEEcCCCceeeeecccCcceehhhhhcCcceeeeCcccchh
Confidence            776 4433 221    1122212233444433334556788888999988877666655433334467778999987776


Q ss_pred             EE
Q psy14511        462 SL  463 (488)
Q Consensus       462 ~~  463 (488)
                      ..
T Consensus       373 l~  374 (733)
T COG4590         373 LS  374 (733)
T ss_pred             ee
Confidence            44

>PF12768 Rax2: Cortical protein marker for cell polarity

Probab=86.23  E-value=10  Score=32.94  Aligned_cols=95  Identities=15%  Similarity=0.277  Sum_probs=57.0

Q ss_pred             CeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec---C----CeEEEEeccccCcCCCccc-c-cccccceeE
Q psy14511         15 GNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS---N----NTVKIWDFRQLDAKRPQVN-N-QCHLSAVKA   85 (488)
Q Consensus        15 g~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~---d----~~i~vwd~~~~~~~~~~~~-~-~~h~~~v~~   85 (488)
                      ..|++||..+.+ ....-.+-.+.|+.|.|..+.+++++|.   +    ..+..||+.+.. ...+.. . ..-.++|..
T Consensus        16 ~~lC~yd~~~~q-W~~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~-w~~~~~~~s~~ipgpv~a   93 (281)
T PF12768_consen   16 PGLCLYDTDNSQ-WSSPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQT-WSSLGGGSSNSIPGPVTA   93 (281)
T ss_pred             CEEEEEECCCCE-eecCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCe-eeecCCcccccCCCcEEE
Confidence            469999987765 3333445667899999998888888875   2    367889987633 211111 1 123478888


Q ss_pred             EEEec-CCCeEEeeeC-CcccceEEEEe
Q psy14511         86 IAWCP-WEPTLLATGG-GICDQTVRLWN  111 (488)
Q Consensus        86 l~~~~-~~~~l~~~~~-~~~d~~i~vwd  111 (488)
                      +.+.. |+..+.+.|. ...+..|..||
T Consensus        94 ~~~~~~d~~~~~~aG~~~~g~~~l~~~d  121 (281)
T PF12768_consen   94 LTFISNDGSNFWVAGRSANGSTFLMKYD  121 (281)
T ss_pred             EEeeccCCceEEEeceecCCCceEEEEc
Confidence            88743 3434554443 11133455565

>KOG2247|consensus

Probab=85.64  E-value=0.19  Score=45.50  Aligned_cols=123  Identities=15%  Similarity=0.206  Sum_probs=84.9

Q ss_pred             cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-c-CeEEEEECCCCCCCcccce-----e
Q psy14511        293 NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-N-NTVKIWDFRQLDAKRPLGL-----I  365 (488)
Q Consensus       293 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d-~~i~iwd~~~~~~~~~~~~-----~  365 (488)
                      .+..++.++.+..+..||-....  ... .........++|.-++..++... . +.+.+||+.+....+.-..     .
T Consensus        45 e~~nlavaca~tiv~~YD~agq~--~le-~n~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytqqLE~gg~~s~s  121 (615)
T KOG2247|consen   45 EGHNLAVACANTIVIYYDKAGQV--ILE-LNPTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQLESGGTSSKS  121 (615)
T ss_pred             CCCceehhhhhhHHHhhhhhcce--ecc-cCCchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHHHhccCcchHH
Confidence            44457777888888888865421  111 12223345688888888777666 3 9999999986532221111     1


Q ss_pred             eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEE
Q psy14511        366 VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCV  420 (488)
Q Consensus       366 ~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l  420 (488)
                      ...|++....++.  |...+.+.|++..+.+..-....|..++++++|.+.+..+
T Consensus       122 ll~wsKg~~el~i--g~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av~lEd~vi  174 (615)
T KOG2247|consen  122 LLAWSKGTPELVI--GNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAVTLEDYVI  174 (615)
T ss_pred             HHhhccCCccccc--cccccceEEEeccchhhhhhhcccccceeEEEecccceee
Confidence            2288999999998  7889999999988877666665588899999999876543

>KOG1898|consensus

Probab=85.16  E-value=50  Score=34.16  Aligned_cols=133  Identities=12%  Similarity=0.146  Sum_probs=79.6

Q ss_pred             CCCeEEEEECC-CCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecc--ccccEEEEEe
Q psy14511        216 LDTSVYTWNTK-TNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRT--HMHQVIAMCW  292 (488)
Q Consensus       216 ~d~~v~iw~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~--~~~~v~~~~~  292 (488)
                      .+|.++.|+.- .++....+.-.. -.+++.  +..|...+++++  ....+++||+...++++..+.  ....|..+.+
T Consensus       910 ~~g~~ytyk~~~~g~~lellh~T~-~~~~v~--Ai~~f~~~~Lag--vG~~l~~YdlG~K~lLRk~e~k~~p~~Is~iqt  984 (1205)
T KOG1898|consen  910 SSGFVYTYKFVRNGDKLELLHKTE-IPGPVG--AICPFQGRVLAG--VGRFLRLYDLGKKKLLRKCELKFIPNRISSIQT  984 (1205)
T ss_pred             CCCceEEEEEEecCceeeeeeccC-CCccce--EEeccCCEEEEe--cccEEEEeeCChHHHHhhhhhccCceEEEEEee
Confidence            45666777643 333222222111 333443  455666677766  778999999988777665432  4567888999


Q ss_pred             cCCEEEEeecCCeEEEEECcCCCccceeeecC--CccEEEEEEccCCcEEEEEec-CeEEEEECC
Q psy14511        293 NGNLLSCGTIGGNILHYDVRTHSDYPTAITRE--GDVVCGLKWSPNGRYLASGSN-NTVKIWDFR  354 (488)
Q Consensus       293 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--~~~i~~~~~s~~~~~l~~~~d-~~i~iwd~~  354 (488)
                      .+..++.|...-.+.++-.+........+...  ...|+.+.+- |...+|.+.. |.+.+-.+.
T Consensus       985 ~~~RI~VgD~qeSV~~~~y~~~~n~l~~fadD~~pR~Vt~~~~l-D~~tvagaDrfGNi~~vR~P 1048 (1205)
T KOG1898|consen  985 YGARIVVGDIQESVHFVRYRREDNQLIVFADDPVPRHVTALELL-DYDTVAGADRFGNIAVVRIP 1048 (1205)
T ss_pred             cceEEEEeeccceEEEEEEecCCCeEEEEeCCCccceeeEEEEe-cCCceeeccccCcEEEEECC
Confidence            89999999887777766655443333333322  2234444433 4455665554 877777654

>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3

Probab=84.76  E-value=31  Score=31.44  Aligned_cols=181  Identities=14%  Similarity=0.161  Sum_probs=93.7

Q ss_pred             CCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEE------ecCCE--EEEee-cC---CeEEEEECcCCCccc
Q psy14511        251 PRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMC------WNGNL--LSCGT-IG---GNILHYDVRTHSDYP  318 (488)
Q Consensus       251 ~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~------~~~~~--l~~~~-~d---g~i~i~d~~~~~~~~  318 (488)
                      |...+++.+ ..++-+.+||++. +.++.+..  +....+.      .+++.  |+.++ .+   ..|++|.+......+
T Consensus        66 p~kSlIigT-dK~~GL~VYdL~G-k~lq~~~~--Gr~NNVDvrygf~l~g~~vDlavas~R~~g~n~l~~f~id~~~g~L  141 (381)
T PF02333_consen   66 PAKSLIIGT-DKKGGLYVYDLDG-KELQSLPV--GRPNNVDVRYGFPLNGKTVDLAVASDRSDGRNSLRLFRIDPDTGEL  141 (381)
T ss_dssp             GGG-EEEEE-ETTTEEEEEETTS--EEEEE-S--S-EEEEEEEEEEEETTEEEEEEEEEE-CCCT-EEEEEEEETTTTEE
T ss_pred             cccceEEEE-eCCCCEEEEcCCC-cEEEeecC--CCcceeeeecceecCCceEEEEEEecCcCCCCeEEEEEecCCCCcc
Confidence            344566666 8889999999976 45555532  2333333      24443  34443 32   469999876422222


Q ss_pred             eeee-------cCCccEEEEEE--cc-CCcEEEEEe--cCeEEEEECCCCCCCc----ccceee-------eeecCCCCE
Q psy14511        319 TAIT-------REGDVVCGLKW--SP-NGRYLASGS--NNTVKIWDFRQLDAKR----PLGLIV-------PKLKREGRE  375 (488)
Q Consensus       319 ~~~~-------~~~~~i~~~~~--s~-~~~~l~~~~--d~~i~iwd~~~~~~~~----~~~~~~-------~~~~~~~~~  375 (488)
                      ..+.       .....++.+++  +| +|++.+...  +|.+..|.+.......    .++.+.       +........
T Consensus       142 ~~v~~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f~~~sQ~EGCVVDDe~g~  221 (381)
T PF02333_consen  142 TDVTDPAAPIATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREFKVGSQPEGCVVDDETGR  221 (381)
T ss_dssp             EE-CBTTC-EE-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEEE-SS-EEEEEEETTTTE
T ss_pred             eEcCCCCcccccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEecCCCcceEEEEecccCC
Confidence            2222       12234677776  33 466555554  4888888876332211    122221       144445566


Q ss_pred             EEEEccCCCCeEEEEeCCC-----cceeEEEee--ccccEEEEEEc--CCCC-EEEEEe-CCCcEEEEecCCC
Q psy14511        376 LVTSHGKQDCSLKMWEYPR-----LHLIEELKI--HQERILSAVLS--PDQT-CVAAAS-ADETISIWNCFPR  437 (488)
Q Consensus       376 l~~~~g~~~~~i~i~d~~~-----~~~~~~~~~--~~~~v~~~~~s--~~~~-~l~t~~-~dg~v~iw~~~~~  437 (488)
                      |+.  +.++.-|.-|+.+-     ++.+....+  ....|..|+.-  ++++ ||+..+ .+++..+|+.+..
T Consensus       222 LYv--gEE~~GIW~y~Aep~~~~~~~~v~~~~g~~l~aDvEGlaly~~~~g~gYLivSsQG~~sf~Vy~r~~~  292 (381)
T PF02333_consen  222 LYV--GEEDVGIWRYDAEPEGGNDRTLVASADGDGLVADVEGLALYYGSDGKGYLIVSSQGDNSFAVYDREGP  292 (381)
T ss_dssp             EEE--EETTTEEEEEESSCCC-S--EEEEEBSSSSB-S-EEEEEEEE-CCC-EEEEEEEGGGTEEEEEESSTT
T ss_pred             EEE--ecCccEEEEEecCCCCCCcceeeecccccccccCccceEEEecCCCCeEEEEEcCCCCeEEEEecCCC
Confidence            777  67777777777742     222322222  34567777764  3443 555544 6788999998754

1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.

>KOG3616|consensus

Probab=84.74  E-value=43  Score=33.09  Aligned_cols=77  Identities=10%  Similarity=0.284  Sum_probs=50.5

Q ss_pred             cCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecC
Q psy14511         35 EGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSM  113 (488)
Q Consensus        35 h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~  113 (488)
                      ...-++++.-+|.|+-++.+. ||.|+++++..... ..+.+   ...+-..+.|...|  |++..+   |+.+.-|. +
T Consensus        13 ~~e~~~aiqshp~~~s~v~~~~d~si~lfn~~~r~q-ski~~---~~~p~~nlv~tnhg--l~~~ts---drr~la~~-~   82 (1636)
T KOG3616|consen   13 EDEFTTAIQSHPGGQSFVLAHQDGSIILFNFIPRRQ-SKICE---EAKPKENLVFTNHG--LVTATS---DRRALAWK-E   82 (1636)
T ss_pred             ccceeeeeeecCCCceEEEEecCCcEEEEeecccch-hhhhh---hcCCccceeeeccc--eEEEec---cchhheee-c
Confidence            334578888899999999998 99999999874221 11221   23455566777655  566665   88888886 3


Q ss_pred             CCeeeeee
Q psy14511        114 NGKEKCHV  121 (488)
Q Consensus       114 ~~~~~~~~  121 (488)
                      +|...+.+
T Consensus        83 dgvvqqqf   90 (1636)
T KOG3616|consen   83 DGVVQQQF   90 (1636)
T ss_pred             cCcchhhc
Confidence            45433333

>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes

Probab=84.69  E-value=23  Score=29.96  Aligned_cols=34  Identities=9%  Similarity=0.115  Sum_probs=23.3

Q ss_pred             EEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecc
Q psy14511        246 CVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRT  282 (488)
Q Consensus       246 ~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~  282 (488)
                      -+...|+|+.++.+ ..+  -.|||..+.+.++.+..
T Consensus       174 ~~~llPdG~lFi~a-n~~--s~i~d~~~n~v~~~lP~  207 (243)
T PF07250_consen  174 FVHLLPDGNLFIFA-NRG--SIIYDYKTNTVVRTLPD  207 (243)
T ss_pred             eEEEcCCCCEEEEE-cCC--cEEEeCCCCeEEeeCCC
Confidence            45677899888887 443  44678877766666654

Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].

>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family

Probab=84.68  E-value=36  Score=32.07  Aligned_cols=177  Identities=14%  Similarity=0.125  Sum_probs=0.0

Q ss_pred             EEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccc----cceeEEEEecCC------CeEEeee---------
Q psy14511         40 CGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHL----SAVKAIAWCPWE------PTLLATG---------   99 (488)
Q Consensus        40 ~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~----~~v~~l~~~~~~------~~l~~~~---------   99 (488)
                      +.|+|.|||++|++-- .|.|++++-.++..........-..    +....|+|+|+-      .++.++-         
T Consensus        33 w~maflPDG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF~~~~~n~~lYvsyt~~~~~~~~  112 (454)
T TIGR03606        33 WALLWGPDNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDFMQEKGNPYVYISYTYKNGDKEL  112 (454)
T ss_pred             eEEEEcCCCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCccccCCCcEEEEEEeccCCCCCc


Q ss_pred             -CCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccc
Q psy14511        100 -GGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKL  178 (488)
Q Consensus       100 -~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (488)
                       .   ...|.-|.+....                                                              
T Consensus       113 ~~---~~~I~R~~l~~~~--------------------------------------------------------------  127 (454)
T TIGR03606       113 PN---HTKIVRYTYDKST--------------------------------------------------------------  127 (454)
T ss_pred             cC---CcEEEEEEecCCC--------------------------------------------------------------


Q ss_pred             cccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEE
Q psy14511        179 PRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAV  258 (488)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~  258 (488)
                                                                   .............+......-..++|.|||.+.++
T Consensus       128 ---------------------------------------------~~l~~~~~Il~~lP~~~~H~GgrI~FgPDG~LYVs  162 (454)
T TIGR03606       128 ---------------------------------------------QTLEKPVDLLAGLPAGNDHNGGRLVFGPDGKIYYT  162 (454)
T ss_pred             ---------------------------------------------CccccceEEEecCCCCCCcCCceEEECCCCcEEEE


Q ss_pred             EeCCCCcEEEEECCcceeee-----------eeccccccEEEEEe-----cCCEEEEeecCCeEEEEECcCCCccceeee
Q psy14511        259 TNTCTEYIDLWHEQEERLIQ-----------KLRTHMHQVIAMCW-----NGNLLSCGTIGGNILHYDVRTHSDYPTAIT  322 (488)
Q Consensus       259 ~~~~~~~i~i~d~~~~~~~~-----------~~~~~~~~v~~~~~-----~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~  322 (488)
                      . +..+.-..-+.......+           ....+.+.|..+..     .++-++ .+....|+-|-+++         
T Consensus       163 ~-GD~g~~~~~n~~~~~~aQ~~~~~~~~~~~d~~~~~GkILRin~DGsiP~dNPf~-~g~~~eIyA~G~RN---------  231 (454)
T TIGR03606       163 I-GEQGRNQGANFFLPNQAQHTPTQQELNGKDYHAYMGKVLRLNLDGSIPKDNPSI-NGVVSHIFTYGHRN---------  231 (454)
T ss_pred             E-CCCCCCCcccccCcchhccccccccccccCcccCceEEEEEcCCCCCCCCCCcc-CCCcceEEEEeccc---------


Q ss_pred             cCCccEEEEEEccCCcEEEE
Q psy14511        323 REGDVVCGLKWSPNGRYLAS  342 (488)
Q Consensus       323 ~~~~~i~~~~~s~~~~~l~~  342 (488)
                           ...++|+|+|++.++
T Consensus       232 -----p~Gla~dp~G~Lw~~  246 (454)
T TIGR03606       232 -----PQGLAFTPDGTLYAS  246 (454)
T ss_pred             -----cceeEECCCCCEEEE

PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.

>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4

Probab=83.71  E-value=4.1  Score=28.01  Aligned_cols=43  Identities=21%  Similarity=0.332  Sum_probs=28.1

Q ss_pred             eecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec
Q psy14511         11 GTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS   55 (488)
Q Consensus        11 g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~   55 (488)
                      +..+|.+.-||..+++ ....+.+ -.--+.++++||+.+|+.+.
T Consensus        33 ~~~~GRll~ydp~t~~-~~vl~~~-L~fpNGVals~d~~~vlv~E   75 (89)
T PF03088_consen   33 GRPTGRLLRYDPSTKE-TTVLLDG-LYFPNGVALSPDESFVLVAE   75 (89)
T ss_dssp             T---EEEEEEETTTTE-EEEEEEE-ESSEEEEEE-TTSSEEEEEE
T ss_pred             CCCCcCEEEEECCCCe-EEEehhC-CCccCeEEEcCCCCEEEEEe
Confidence            3457889999998876 2233333 23458899999999988886

3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.

>PF12768 Rax2: Cortical protein marker for cell polarity

Probab=83.39  E-value=30  Score=30.16  Aligned_cols=92  Identities=14%  Similarity=0.208  Sum_probs=56.2

Q ss_pred             CCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEe-----CCCCcEEEEECCcceeeeeecc-----cccc
Q psy14511        217 DTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTN-----TCTEYIDLWHEQEERLIQKLRT-----HMHQ  286 (488)
Q Consensus       217 d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-----~~~~~i~i~d~~~~~~~~~~~~-----~~~~  286 (488)
                      -..|++||..+.+....-.-   -.+.|+.+.|..+.+.++.|.     +....+..||..+... ..+..     -.++
T Consensus        15 C~~lC~yd~~~~qW~~~g~~---i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w-~~~~~~~s~~ipgp   90 (281)
T PF12768_consen   15 CPGLCLYDTDNSQWSSPGNG---ISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTW-SSLGGGSSNSIPGP   90 (281)
T ss_pred             CCEEEEEECCCCEeecCCCC---ceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCee-eecCCcccccCCCc
Confidence            35689999988876554332   567899999986655555541     2466788899887543 22222     2467


Q ss_pred             EEEEEe---cCC-EEEEee-cCC--eEEEEECc
Q psy14511        287 VIAMCW---NGN-LLSCGT-IGG--NILHYDVR  312 (488)
Q Consensus       287 v~~~~~---~~~-~l~~~~-~dg--~i~i~d~~  312 (488)
                      +.++.+   |+. ..++|. .++  .|..||=.
T Consensus        91 v~a~~~~~~d~~~~~~aG~~~~g~~~l~~~dGs  123 (281)
T PF12768_consen   91 VTALTFISNDGSNFWVAGRSANGSTFLMKYDGS  123 (281)
T ss_pred             EEEEEeeccCCceEEEeceecCCCceEEEEcCC
Confidence            888877   443 444443 233  35555543

>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates

Probab=82.91  E-value=5.9  Score=38.68  Aligned_cols=41  Identities=20%  Similarity=0.302  Sum_probs=28.6

Q ss_pred             cceeEEEEec----CCCeEEeeeCCcccceEEEEecCCCeeeeeeecC
Q psy14511         81 SAVKAIAWCP----WEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTD  124 (488)
Q Consensus        81 ~~v~~l~~~~----~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~  124 (488)
                      +.+..++.++    +..++++.+.   |+++|+||+.+++++......
T Consensus       215 ~~~~~~~~~~~~~~~~~~l~tl~~---D~~LRiW~l~t~~~~~~~~~~  259 (547)
T PF11715_consen  215 SVAASLAVSSSEINDDTFLFTLSR---DHTLRIWSLETGQCLATIDLL  259 (547)
T ss_dssp             --EEEEEE-----ETTTEEEEEET---TSEEEEEETTTTCEEEEEETT
T ss_pred             CccceEEEecceeCCCCEEEEEeC---CCeEEEEECCCCeEEEEeccc
Confidence            3455566655    5667777776   999999999999997766544

The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.

>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []

Probab=82.23  E-value=22  Score=36.45  Aligned_cols=108  Identities=11%  Similarity=0.125  Sum_probs=70.4

Q ss_pred             ccCCceEEEeecCCeEEEEEcccCcc----cceeecccCc----------eEEEEEEccCCcEEEEecCCeEEEEecccc
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTHSD----YPTAITREGD----------VVCGLKWSPNGRYLASGSNNTVKIWDFRQL   67 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~~~----~~~~~~~h~~----------~V~~l~~sp~g~~las~~d~~i~vwd~~~~   67 (488)
                      +|+.+.||+-...|.-.|||+.....    .......+.+          .-..+.|.++-+.|+.++...+.++|+++.
T Consensus       155 P~~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~~r~~l~~~d~~~~  234 (765)
T PF10214_consen  155 PWDQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVCNRSKLMLIDFESN  234 (765)
T ss_pred             cCccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEEEEcCCceEEEECCCC
Confidence            57888999999999999999922111    1111112222          234788999988999999899999999875


Q ss_pred             CcCCCcccccccccceeEEEEecCCC-eEEeeeCCcccceEEEEecCC
Q psy14511         68 DAKRPQVNNQCHLSAVKAIAWCPWEP-TLLATGGGICDQTVRLWNSMN  114 (488)
Q Consensus        68 ~~~~~~~~~~~h~~~v~~l~~~~~~~-~l~~~~~~~~d~~i~vwd~~~  114 (488)
                      .....+. .......|.++.-+|+.. +++...    ...|...++..
T Consensus       235 ~~~~~l~-~~~~~~~IlDv~~~~~~~~~~FiLT----s~eiiw~~~~~  277 (765)
T PF10214_consen  235 WQTEYLV-TAKTWSWILDVKRSPDNPSHVFILT----SKEIIWLDVKS  277 (765)
T ss_pred             Cccchhc-cCCChhheeeEEecCCccceEEEEe----cCeEEEEEccC
Confidence            4433222 233456788998888732 222222    44777777765

These proteins are found in fungi.

>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A

Probab=80.53  E-value=5.8  Score=22.15  Aligned_cols=25  Identities=28%  Similarity=0.332  Sum_probs=18.1

Q ss_pred             EEEecCCEEEEeecCCeEEEEECcC
Q psy14511        289 AMCWNGNLLSCGTIGGNILHYDVRT  313 (488)
Q Consensus       289 ~~~~~~~~l~~~~~dg~i~i~d~~~  313 (488)
                      ++...+..++.++.||.++.+|.++
T Consensus        16 ~~~v~~g~vyv~~~dg~l~ald~~t   40 (40)
T PF13570_consen   16 SPAVAGGRVYVGTGDGNLYALDAAT   40 (40)
T ss_dssp             --EECTSEEEEE-TTSEEEEEETT-
T ss_pred             CCEEECCEEEEEcCCCEEEEEeCCC
Confidence            3455778899999999999998753

>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12

Probab=80.40  E-value=40  Score=29.61  Aligned_cols=183  Identities=14%  Similarity=0.172  Sum_probs=94.9

Q ss_pred             CeEEEEECCCCceEEEEecCCC---CCCceEEEEEcCCC-----CeEEEEeCCCCcEEEEECCcceeeeeeccccccEEE
Q psy14511        218 TSVYTWNTKTNKTQLLVEYPTY---DNAYISCVAWKPRT-----TDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIA  289 (488)
Q Consensus       218 ~~v~iw~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~-----~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~  289 (488)
                      -+|..||+.+++.++.+.++..   ..+.+..+.+....     .+++.+-...+.|.++|+.+++..+.+..+...-. 
T Consensus        34 pKLv~~Dl~t~~li~~~~~p~~~~~~~s~lndl~VD~~~~~~~~~~aYItD~~~~glIV~dl~~~~s~Rv~~~~~~~~p-  112 (287)
T PF03022_consen   34 PKLVAFDLKTNQLIRRYPFPPDIAPPDSFLNDLVVDVRDGNCDDGFAYITDSGGPGLIVYDLATGKSWRVLHNSFSPDP-  112 (287)
T ss_dssp             -EEEEEETTTTCEEEEEE--CCCS-TCGGEEEEEEECTTTTS-SEEEEEEETTTCEEEEEETTTTEEEEEETCGCTTS--
T ss_pred             cEEEEEECCCCcEEEEEECChHHcccccccceEEEEccCCCCcceEEEEeCCCcCcEEEEEccCCcEEEEecCCcceec-
Confidence            4788999999998888887631   34577888887632     35666645567899999999877666654322110 


Q ss_pred             EEecCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEcc---CCcEEEEEecCeEEEEECCC-----CCCC--
Q psy14511        290 MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSP---NGRYLASGSNNTVKIWDFRQ-----LDAK--  359 (488)
Q Consensus       290 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~---~~~~l~~~~d~~i~iwd~~~-----~~~~--  359 (488)
                         +...+..   +|...  .            . .+.+..++.+|   ++++|....=..-++|.+.+     ....  
T Consensus       113 ---~~~~~~i---~g~~~--~------------~-~dg~~gial~~~~~d~r~LYf~~lss~~ly~v~T~~L~~~~~~~~  171 (287)
T PF03022_consen  113 ---DAGPFTI---GGESF--Q------------W-PDGIFGIALSPISPDGRWLYFHPLSSRKLYRVPTSVLRDPSLSDA  171 (287)
T ss_dssp             ---SSEEEEE---TTEEE--E------------E-TTSEEEEEE-TTSTTS-EEEEEETT-SEEEEEEHHHHCSTT--HH
T ss_pred             ---cccceec---cCceE--e------------c-CCCccccccCCCCCCccEEEEEeCCCCcEEEEEHHHhhCcccccc
Confidence               0000110   11111  0            0 11155666655   66677766532233333321     1110  


Q ss_pred             -------cccce-----eeeeecCCCCEEEEEccCCCCeEEEEeCCCc---ceeEEEe-ec--cccEEEEEEcC--CCCE
Q psy14511        360 -------RPLGL-----IVPKLKREGRELVTSHGKQDCSLKMWEYPRL---HLIEELK-IH--QERILSAVLSP--DQTC  419 (488)
Q Consensus       360 -------~~~~~-----~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~---~~~~~~~-~~--~~~v~~~~~s~--~~~~  419 (488)
                             +.+..     ...+++++|...++  --..+.|..|+..+.   +....+. ..  -..+.++.+.+  +|.+
T Consensus       172 ~~~~~~v~~lG~k~~~s~g~~~D~~G~ly~~--~~~~~aI~~w~~~~~~~~~~~~~l~~d~~~l~~pd~~~i~~~~~g~L  249 (287)
T PF03022_consen  172 QALASQVQDLGDKGSQSDGMAIDPNGNLYFT--DVEQNAIGCWDPDGPYTPENFEILAQDPRTLQWPDGLKIDPEGDGYL  249 (287)
T ss_dssp             H-HHHT-EEEEE---SECEEEEETTTEEEEE--ECCCTEEEEEETTTSB-GCCEEEEEE-CC-GSSEEEEEE-T--TS-E
T ss_pred             ccccccceeccccCCCCceEEECCCCcEEEe--cCCCCeEEEEeCCCCcCccchheeEEcCceeeccceeeeccccCceE
Confidence                   01100     01167777777777  567888999998751   1122222 11  23567888888  6665


Q ss_pred             EEEEe
Q psy14511        420 VAAAS  424 (488)
Q Consensus       420 l~t~~  424 (488)
                      .+...
T Consensus       250 ~v~sn  254 (287)
T PF03022_consen  250 WVLSN  254 (287)
T ss_dssp             EEEE-
T ss_pred             EEEEC
Confidence            55543

5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	488
4gga_A	420	Structural Analysis Of Human Cdc20 Supports Multi-S		3e-43
4ggd_A	431	Structural Analysis Of Human Cdc20 Supports Multisi		1e-41
4ggc_A	318	Structural Analysis Of Human Cdc20 Supports Multi-S		2e-37
4aez_A	401	Crystal Structure Of Mitotic Checkpoint Complex Len		1e-26
2h13_A	317	Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length		4e-11
2h13_A	317	Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length		4e-06
3smr_A	312	Crystal Structure Of Human Wd Repeat Domain 5 With		4e-11
3smr_A	312	Crystal Structure Of Human Wd Repeat Domain 5 With		4e-06
2h9m_A	313	Wdr5 In Complex With Unmodified H3k4 Peptide Length		4e-11
2h9m_A	313	Wdr5 In Complex With Unmodified H3k4 Peptide Length		4e-06
2h68_A	312	Histone H3 Recognition And Presentation By The Wdr5		4e-11
2h68_A	312	Histone H3 Recognition And Presentation By The Wdr5		4e-06
2xl2_A	334	Wdr5 In Complex With An Rbbp5 Peptide Recruited To		4e-11
2xl2_A	334	Wdr5 In Complex With An Rbbp5 Peptide Recruited To		5e-06
4a7j_A	318	Symmetric Dimethylation Of H3 Arginine 2 Is A Novel		4e-11
4a7j_A	318	Symmetric Dimethylation Of H3 Arginine 2 Is A Novel		4e-06
3psl_A	318	Fine-Tuning The Stimulation Of Mll1 Methyltransfera		4e-11
3psl_A	318	Fine-Tuning The Stimulation Of Mll1 Methyltransfera		4e-06
2g9a_A	311	Structural Basis For The Specific Recognition Of Me		4e-11
2g9a_A	311	Structural Basis For The Specific Recognition Of Me		4e-06
2h9l_A	329	Wdr5delta23 Length = 329		4e-11
2h9l_A	329	Wdr5delta23 Length = 329		4e-06
3emh_A	318	Structural Basis Of Wdr5-Mll Interaction Length = 3		5e-11
3emh_A	318	Structural Basis Of Wdr5-Mll Interaction Length = 3		5e-06
2g99_A	308	Structural Basis For The Specific Recognition Of Me		5e-11
2g99_A	308	Structural Basis For The Specific Recognition Of Me		4e-06
2gnq_A	336	Structure Of Wdr5 Length = 336		5e-11
2gnq_A	336	Structure Of Wdr5 Length = 336		5e-06
3mxx_A	315	Crystal Structure Of Wdr5 Mutant (S62a) Length = 31		5e-11
3mxx_A	315	Crystal Structure Of Wdr5 Mutant (S62a) Length = 31		7e-06
2cnx_A	315	Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.		8e-11
2cnx_A	315	Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.		3e-06
3n0e_A	315	Crystal Structure Of Wdr5 Mutant (W330y) Length = 3		3e-10
3n0e_A	315	Crystal Structure Of Wdr5 Mutant (W330y) Length = 3		3e-06
2co0_A	315	Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs		4e-10
2co0_A	315	Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs		4e-06
3n0d_A	315	Crystal Structure Of Wdr5 Mutant (W330f) Length = 3		4e-10
3n0d_A	315	Crystal Structure Of Wdr5 Mutant (W330f) Length = 3		3e-06
2ymu_A	577	Structure Of A Highly Repetitive Propeller Structur		6e-09
2ymu_A	577	Structure Of A Highly Repetitive Propeller Structur		6e-07
2ymu_A	577	Structure Of A Highly Repetitive Propeller Structur		2e-05
2pbi_B	354	The Multifunctional Nature Of Gbeta5RGS9 REVEALED F		1e-06
1erj_A	393	Crystal Structure Of The C-Terminal Wd40 Domain Of		2e-05
1vyh_C	410	Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410		2e-05
2bcj_B	340	Crystal Structure Of G Protein-coupled Receptor Kin		2e-04
1gg2_B	340	G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Bet		2e-04
3sn6_B	351	Crystal Structure Of The Beta2 Adrenergic Receptor-		3e-04
1got_B	340	Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimer		3e-04
1a0r_B	340	Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-		3e-04

>pdb|4GGA|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 420

Iteration: 1
 Score =  172 bits (437), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 123/415 (29%), Positives = 199/415 (47%), Gaps = 85/415 (20%)
Query: 121 VKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQS-KRTVSPTQFLRTLG--- 176
           +  ++Q  N +T + +E +K   L+  L+GF+++  K+L  S K   +P  +   L    
Sbjct: 16  LSKENQPENSQTPTKKEHQKAWALN--LNGFDVEEAKILRLSGKPQNAPEGYQNRLKVLY 73
Query: 177 ----------KLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTK 226
                     K  R + + P+RIL+AP I ND+Y + +DW   + LAVALD SVY W+  
Sbjct: 74  SQKATPGSSRKTCRYIPSLPDRILDAPEIRNDYYLNLVDWSSGNVLAVALDNSVYLWSAS 133
Query: 227 TNKT-QLL-VEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHM 284
           +    QLL +E P     YIS VAW      LAV  +  E + LW  Q+++ ++ + +H 
Sbjct: 134 SGDILQLLQMEQP---GEYISSVAWIKEGNYLAVGTSSAE-VQLWDVQQQKRLRNMTSHS 189
Query: 285 HQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASG- 343
            +V ++ WN  +LS G+  G+I H+DVR    +   ++     VCGL+W+P+GR+LASG 
Sbjct: 190 ARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGG 249
Query: 344 -------------------------------------------------SNNTVKIWD-- 352
                                                            S+  ++IW+  
Sbjct: 250 NDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC 309
Query: 353 ----FRQLDAKRPLGLIV--PKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQE 406
                  +DA   +  I+  P  K    EL++ HG     L +W+YP +  + ELK H  
Sbjct: 310 SGACLSAVDAHSQVCSILWSPHYK----ELISGHGFAQNQLVIWKYPTMAKVAELKGHTS 365
Query: 407 RILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKARQVGSGSSLEFAILKQPV 461
           R+LS  +SPD   VA+A+ADET+ +W CF  D  R+ R+    S+ + +++ Q +
Sbjct: 366 RVLSLTMSPDGATVASAAADETLRLWRCFELDPARR-REREKASAAKSSLIHQGI 419

>pdb|4GGD|A Chain A, Structural Analysis Of Human Cdc20 Supports Multisite Degron Recognition By ApcC. Length = 431

Iteration: 1
 Score =  167 bits (423), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 122/415 (29%), Positives = 199/415 (47%), Gaps = 85/415 (20%)
Query: 121 VKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQS-KRTVSPTQFLRTLG--- 176
           +  ++Q  N +T + +E +K   L+  L+GF+++  K+L  S K   +P  +   L    
Sbjct: 27  LSKENQPENSQTPTKKEHQKAWALN--LNGFDVEEAKILRLSGKPQNAPEGYQNRLKVLY 84
Query: 177 ----------KLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTK 226
                     K  R + + P+RIL+AP I ND+Y + +DW   + LAVALD SVY W+  
Sbjct: 85  SQKATPGSSRKTCRYIPSLPDRILDAPEIRNDYYLNLVDWSSGNVLAVALDNSVYLWSAS 144
Query: 227 TNKT-QLL-VEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHM 284
           +    QLL +E P     YIS VAW      LAV  +  E + LW  Q+++ ++ + +H 
Sbjct: 145 SGDILQLLQMEQP---GEYISSVAWIKEGNYLAVGTSSAE-VQLWDVQQQKRLRNMTSHS 200
Query: 285 HQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRY----- 339
            +V ++ WN  +LS G+  G+I H+DVR    +   ++     VCGL+W+P+GR+     
Sbjct: 201 ARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGG 260
Query: 340 ------------------------------------------LASG---SNNTVKIWD-- 352
                                                     LA+G   S+  ++IW+  
Sbjct: 261 NDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC 320
Query: 353 ----FRQLDAKRPLGLIV--PKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQE 406
                  +DA   +  I+  P  K    EL++ HG     L +W+YP +  + ELK H  
Sbjct: 321 SGACLSAVDAHSQVCSILWSPHYK----ELISGHGFAQNQLVIWKYPTMAKVAELKGHTS 376
Query: 407 RILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKARQVGSGSSLEFAILKQPV 461
           R+LS  +SPD   VA+A+ADET+ +W CF  D  R+ R+    S+ + +++ Q +
Sbjct: 377 RVLSLTMSPDGATVASAAADETLRLWRCFELDPARR-REREKASAAKSSLIHQGI 430

>pdb|4GGC|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 318

Iteration: 1
 Score =  153 bits (386), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 100/318 (31%), Positives = 150/318 (47%), Gaps = 60/318 (18%)
Query: 177 KLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKT-QLL-V 234
           K  R + + P+RIL+AP I ND+Y + +DW   + LAVALD SVY W+  +    QLL +
Sbjct: 4   KTCRYIPSLPDRILDAPEIRNDYYLNLVDWSSGNVLAVALDNSVYLWSASSGDILQLLQM 63
Query: 235 EYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNG 294
           E P     YIS VAW      LAV  +  E + LW  Q+++ ++ + +H  +V ++ WN 
Sbjct: 64  EQP---GEYISSVAWIKEGNYLAVGTSSAE-VQLWDVQQQKRLRNMTSHSARVGSLSWNS 119
Query: 295 NLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN-NTVKIW-- 351
            +LS G+  G+I H+DVR    +   ++     VCGL+W+P+GR+LASG N N V +W  
Sbjct: 120 YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPS 179
Query: 352 --------DFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMW------------- 390
                     +     +     V     +   L T  G  D  +++W             
Sbjct: 180 APGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDA 239
Query: 391 ------------------------------EYPRLHLIEELKIHQERILSAVLSPDQTCV 420
                                         +YP +  + ELK H  R+LS  +SPD   V
Sbjct: 240 HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATV 299
Query: 421 AAASADETISIWNCFPRD 438
           A+A+ADET+ +W CF  D
Sbjct: 300 ASAAADETLRLWRCFELD 317

>pdb|4AEZ|A Chain A, Crystal Structure Of Mitotic Checkpoint Complex Length = 401

Iteration: 1
 Score =  117 bits (293), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/362 (25%), Positives = 151/362 (41%), Gaps = 77/362 (21%)
Query: 142 RHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYT 201
           R L+F L   E   KK ++   +   P + + T  K  R+    PER+L+AP II+D+Y 
Sbjct: 41  RVLAFKLDAPEA--KKPVDLRTQHNRPQRPVVTPAK--RRFNTTPERVLDAPGIIDDYYL 96
Query: 202 SGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNT 261
           + LDW   + +AVAL+ +VY WN  +     L E  T ++ Y++ V W    + L+V   
Sbjct: 97  NLLDWSNLNVVAVALERNVYVWNADSGSVSALAE--TDESTYVASVKWSHDGSFLSV-GL 153
Query: 262 CTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAI 321
               +D++  + +  ++ +  H  +V  + WN ++LS G+  G I H+DVR  +     +
Sbjct: 154 GNGLVDIYDVESQTKLRTMAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTL 213
Query: 322 TREGDVVCGLKWSPNGRYLASGSN-NTVKIWDFRQLDAKRPLGLIVPKLKR--------- 371
                 VCGL W  +G  LASG N N V+IWD R           +PK  +         
Sbjct: 214 QGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSS---------IPKFTKTNHNAAVKA 264
Query: 372 ------EGRELVTSHGKQDCSLKMW----------------------------------- 390
                 +   L T  G  D  +  W                                   
Sbjct: 265 VAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGF 324
Query: 391 --------EYPRLHLIEELKI--HQERILSAVLSPDQTCVAAASADETISIWNCFPRDKK 440
                    Y    L +++ I  H  R+L + LSPD   ++ A++DE +  W  +  D  
Sbjct: 325 PDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHV 384
Query: 441 RK 442
           ++
Sbjct: 385 KR 386

>pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 243 YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWN--GNLLSCG 300
           Y+ C  + P++ +L V+ +  E + +W  +  + ++ L  H   V A+ +N  G+L+   
Sbjct: 114 YVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSS 172
Query: 301 TIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRY-LASGSNNTVKIWDFRQ---- 355
           +  G    +D  +     T I  +   V  +K+SPNG+Y LA+  +NT+K+WD+ +    
Sbjct: 173 SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL 232
Query: 356 ---LDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAV 412
                 K     I       G + + S G +D  + +W      ++++L+ H + ++S  
Sbjct: 233 KTYTGHKNEKYCIFANFSVTGGKWIVS-GSEDNLVYIWNLQTKEIVQKLQGHTDVVISTA 291
Query: 413 LSPDQTCVAAASA--DETISIW 432
             P +  +A+A+   D+TI +W
Sbjct: 292 CHPTENIIASAALENDKTIKLW 313

>pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 10/126 (7%)
Query: 316 DYPTAITREG--DVVCGLKWSPNGRYLASGS-NNTVKIW-----DFRQLDAKRPLGLIVP 367
           +Y    T  G    V  +K+SPNG +LAS S +  +KIW      F +  +   LG+   
Sbjct: 17  NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 76
Query: 368 KLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADE 427
               +   LV++    D +LK+W+      ++ LK H   +     +P    + + S DE
Sbjct: 77  AWSSDSNLLVSA--SDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 134
Query: 428 TISIWN 433
           ++ IW+
Sbjct: 135 SVRIWD 140

>pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 243 YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWN--GNLLSCG 300
           Y+ C  + P++ +L V+ +  E + +W  +  + ++ L  H   V A+ +N  G+L+   
Sbjct: 109 YVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSS 167
Query: 301 TIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRY-LASGSNNTVKIWDFRQ---- 355
           +  G    +D  +     T I  +   V  +K+SPNG+Y LA+  +NT+K+WD+ +    
Sbjct: 168 SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL 227
Query: 356 ---LDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAV 412
                 K     I       G + + S G +D  + +W      ++++L+ H + ++S  
Sbjct: 228 KTYTGHKNEKYCIFANFSVTGGKWIVS-GSEDNLVYIWNLQTKEIVQKLQGHTDVVISTA 286
Query: 413 LSPDQTCVAAASA--DETISIW 432
             P +  +A+A+   D+TI +W
Sbjct: 287 CHPTENIIASAALENDKTIKLW 308

>pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 10/126 (7%)
Query: 316 DYPTAITREG--DVVCGLKWSPNGRYLASGS-NNTVKIW-----DFRQLDAKRPLGLIVP 367
           +Y    T  G    V  +K+SPNG +LAS S +  +KIW      F +  +   LG+   
Sbjct: 12  NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 71
Query: 368 KLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADE 427
               +   LV++    D +LK+W+      ++ LK H   +     +P    + + S DE
Sbjct: 72  AWSSDSNLLVSA--SDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 129
Query: 428 TISIWN 433
           ++ IW+
Sbjct: 130 SVRIWD 135

>pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 243 YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWN--GNLLSCG 300
           Y+ C  + P++ +L V+ +  E + +W  +  + ++ L  H   V A+ +N  G+L+   
Sbjct: 110 YVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSS 168
Query: 301 TIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRY-LASGSNNTVKIWDFRQ---- 355
           +  G    +D  +     T I  +   V  +K+SPNG+Y LA+  +NT+K+WD+ +    
Sbjct: 169 SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL 228
Query: 356 ---LDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAV 412
                 K     I       G + + S G +D  + +W      ++++L+ H + ++S  
Sbjct: 229 KTYTGHKNEKYCIFANFSVTGGKWIVS-GSEDNLVYIWNLQTKEIVQKLQGHTDVVISTA 287
Query: 413 LSPDQTCVAAASA--DETISIW 432
             P +  +A+A+   D+TI +W
Sbjct: 288 CHPTENIIASAALENDKTIKLW 309

>pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 10/126 (7%)
Query: 316 DYPTAITREG--DVVCGLKWSPNGRYLASGS-NNTVKIW-----DFRQLDAKRPLGLIVP 367
           +Y    T  G    V  +K+SPNG +LAS S +  +KIW      F +  +   LG+   
Sbjct: 13  NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 72
Query: 368 KLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADE 427
               +   LV++    D +LK+W+      ++ LK H   +     +P    + + S DE
Sbjct: 73  AWSSDSNLLVSA--SDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 130
Query: 428 TISIWN 433
           ++ IW+
Sbjct: 131 SVRIWD 136

>pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 243 YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWN--GNLLSCG 300
           Y+ C  + P++ +L V+ +  E + +W  +  + ++ L  H   V A+ +N  G+L+   
Sbjct: 109 YVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSS 167
Query: 301 TIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRY-LASGSNNTVKIWDFRQ---- 355
           +  G    +D  +     T I  +   V  +K+SPNG+Y LA+  +NT+K+WD+ +    
Sbjct: 168 SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL 227
Query: 356 ---LDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAV 412
                 K     I       G + + S G +D  + +W      ++++L+ H + ++S  
Sbjct: 228 KTYTGHKNEKYCIFANFSVTGGKWIVS-GSEDNLVYIWNLQTKEIVQKLQGHTDVVISTA 286
Query: 413 LSPDQTCVAAASA--DETISIW 432
             P +  +A+A+   D+TI +W
Sbjct: 287 CHPTENIIASAALENDKTIKLW 308

>pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 10/126 (7%)
Query: 316 DYPTAITREG--DVVCGLKWSPNGRYLASGS-NNTVKIW-----DFRQLDAKRPLGLIVP 367
           +Y    T  G    V  +K+SPNG +LAS S +  +KIW      F +  +   LG+   
Sbjct: 12  NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 71
Query: 368 KLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADE 427
               +   LV++    D +LK+W+      ++ LK H   +     +P    + + S DE
Sbjct: 72  AWSSDSNLLVSA--SDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 129
Query: 428 TISIWN 433
           ++ IW+
Sbjct: 130 SVRIWD 135

>pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 243 YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWN--GNLLSCG 300
           Y+ C  + P++ +L V+ +  E + +W  +  + ++ L  H   V A+ +N  G+L+   
Sbjct: 131 YVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSS 189
Query: 301 TIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRY-LASGSNNTVKIWDFRQ---- 355
           +  G    +D  +     T I  +   V  +K+SPNG+Y LA+  +NT+K+WD+ +    
Sbjct: 190 SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL 249
Query: 356 ---LDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAV 412
                 K     I       G + + S G +D  + +W      ++++L+ H + ++S  
Sbjct: 250 KTYTGHKNEKYCIFANFSVTGGKWIVS-GSEDNLVYIWNLQTKEIVQKLQGHTDVVISTA 308
Query: 413 LSPDQTCVAAASA--DETISIW 432
             P +  +A+A+   D+TI +W
Sbjct: 309 CHPTENIIASAALENDKTIKLW 330

>pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 8/113 (7%)
Query: 327 VVCGLKWSPNGRYLASGS-NNTVKIW-----DFRQLDAKRPLGLIVPKLKREGRELVTSH 380
            V  +K+SPNG +LAS S +  +KIW      F +  +   LG+       +   LV++ 
Sbjct: 47  AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSA- 105
Query: 381 GKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWN 433
              D +LK+W+      ++ LK H   +     +P    + + S DE++ IW+
Sbjct: 106 -SDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157

>pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 243 YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWN--GNLLSCG 300
           Y+ C  + P++ +L V+ +  E + +W  +  + ++ L  H   V A+ +N  G+L+   
Sbjct: 115 YVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSS 173
Query: 301 TIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRY-LASGSNNTVKIWDFRQ---- 355
           +  G    +D  +     T I  +   V  +K+SPNG+Y LA+  +NT+K+WD+ +    
Sbjct: 174 SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL 233
Query: 356 ---LDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAV 412
                 K     I       G + + S G +D  + +W      ++++L+ H + ++S  
Sbjct: 234 KTYTGHKNEKYCIFANFSVTGGKWIVS-GSEDNLVYIWNLQTKEIVQKLQGHTDVVISTA 292
Query: 413 LSPDQTCVAAASA--DETISIW 432
             P +  +A+A+   D+TI +W
Sbjct: 293 CHPTENIIASAALENDKTIKLW 314

>pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 8/113 (7%)
Query: 327 VVCGLKWSPNGRYLASGS-NNTVKIW-----DFRQLDAKRPLGLIVPKLKREGRELVTSH 380
            V  +K+SPNG +LAS S +  +KIW      F +  +   LG+       +   LV++ 
Sbjct: 31  AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSA- 89
Query: 381 GKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWN 433
              D +LK+W+      ++ LK H   +     +P    + + S DE++ IW+
Sbjct: 90  -SDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 141

>pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 243 YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWN--GNLLSCG 300
           Y+ C  + P++ +L V+ +  E + +W  +  + ++ L  H   V A+ +N  G+L+   
Sbjct: 115 YVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSS 173
Query: 301 TIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRY-LASGSNNTVKIWDFRQ---- 355
           +  G    +D  +     T I  +   V  +K+SPNG+Y LA+  +NT+K+WD+ +    
Sbjct: 174 SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL 233
Query: 356 ---LDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAV 412
                 K     I       G + + S G +D  + +W      ++++L+ H + ++S  
Sbjct: 234 KTYTGHKNEKYCIFANFSVTGGKWIVS-GSEDNLVYIWNLQTKEIVQKLQGHTDVVISTA 292
Query: 413 LSPDQTCVAAASA--DETISIW 432
             P +  +A+A+   D+TI +W
Sbjct: 293 CHPTENIIASAALENDKTIKLW 314

>pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 10/126 (7%)
Query: 316 DYPTAITREG--DVVCGLKWSPNGRYLASGS-NNTVKIW-----DFRQLDAKRPLGLIVP 367
           +Y    T  G    V  +K+SPNG +LAS S +  +KIW      F +  +   LG+   
Sbjct: 18  NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 77
Query: 368 KLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADE 427
               +   LV++    D +LK+W+      ++ LK H   +     +P    + + S DE
Sbjct: 78  AWSSDSNLLVSA--SDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 135
Query: 428 TISIWN 433
           ++ IW+
Sbjct: 136 SVRIWD 141

>pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 243 YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWN--GNLLSCG 300
           Y+ C  + P++ +L V+ +  E + +W  +  + ++ L  H   V A+ +N  G+L+   
Sbjct: 108 YVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSS 166
Query: 301 TIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRY-LASGSNNTVKIWDFRQ---- 355
           +  G    +D  +     T I  +   V  +K+SPNG+Y LA+  +NT+K+WD+ +    
Sbjct: 167 SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL 226
Query: 356 ---LDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAV 412
                 K     I       G + + S G +D  + +W      ++++L+ H + ++S  
Sbjct: 227 KTYTGHKNEKYCIFANFSVTGGKWIVS-GSEDNLVYIWNLQTKEIVQKLQGHTDVVISTA 285
Query: 413 LSPDQTCVAAASA--DETISIW 432
             P +  +A+A+   D+TI +W
Sbjct: 286 CHPTENIIASAALENDKTIKLW 307

>pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 10/126 (7%)
Query: 316 DYPTAITREG--DVVCGLKWSPNGRYLASGS-NNTVKIW-----DFRQLDAKRPLGLIVP 367
           +Y    T  G    V  +K+SPNG +LAS S +  +KIW      F +  +   LG+   
Sbjct: 11  NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 70
Query: 368 KLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADE 427
               +   LV++    D +LK+W+      ++ LK H   +     +P    + + S DE
Sbjct: 71  AWSSDSNLLVSA--SDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 128
Query: 428 TISIWN 433
           ++ IW+
Sbjct: 129 SVRIWD 134

>pdb|2H9L|A Chain A, Wdr5delta23 Length = 329

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 243 YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWN--GNLLSCG 300
           Y+ C  + P++ +L V+ +  E + +W  +  + ++ L  H   V A+ +N  G+L+   
Sbjct: 126 YVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSS 184
Query: 301 TIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRY-LASGSNNTVKIWDFRQ---- 355
           +  G    +D  +     T I  +   V  +K+SPNG+Y LA+  +NT+K+WD+ +    
Sbjct: 185 SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL 244
Query: 356 ---LDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAV 412
                 K     I       G + + S G +D  + +W      ++++L+ H + ++S  
Sbjct: 245 KTYTGHKNEKYCIFANFSVTGGKWIVS-GSEDNLVYIWNLQTKEIVQKLQGHTDVVISTA 303
Query: 413 LSPDQTCVAAASA--DETISIW 432
             P +  +A+A+   D+TI +W
Sbjct: 304 CHPTENIIASAALENDKTIKLW 325

>pdb|2H9L|A Chain A, Wdr5delta23 Length = 329

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 10/126 (7%)
Query: 316 DYPTAITREG--DVVCGLKWSPNGRYLASGS-NNTVKIW-----DFRQLDAKRPLGLIVP 367
           +Y    T  G    V  +K+SPNG +LAS S +  +KIW      F +  +   LG+   
Sbjct: 29  NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 88
Query: 368 KLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADE 427
               +   LV++    D +LK+W+      ++ LK H   +     +P    + + S DE
Sbjct: 89  AWSSDSNLLVSA--SDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 146
Query: 428 TISIWN 433
           ++ IW+
Sbjct: 147 SVRIWD 152

>pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318

Iteration: 1
 Score = 65.9 bits (159), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 243 YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWN--GNLLSCG 300
           Y+ C  + P++ +L V+ +  E + +W  +  + ++ L  H   V A+ +N  G+L+   
Sbjct: 115 YVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSS 173
Query: 301 TIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRY-LASGSNNTVKIWDFRQ---- 355
           +  G    +D  +     T I  +   V  +K+SPNG+Y LA+  +NT+K+WD+ +    
Sbjct: 174 SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL 233
Query: 356 ---LDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAV 412
                 K     I       G + + S G +D  + +W      ++++L+ H + ++S  
Sbjct: 234 KTYTGHKNEKYCIFANFSVTGGKWIVS-GSEDNLVYIWNLQTKEIVQKLQGHTDVVISTA 292
Query: 413 LSPDQTCVAAASA--DETISIW 432
             P +  +A+A+   D+TI +W
Sbjct: 293 CHPTENIIASAALENDKTIKLW 314

>pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 8/113 (7%)
Query: 327 VVCGLKWSPNGRYLASGS-NNTVKIW-----DFRQLDAKRPLGLIVPKLKREGRELVTSH 380
            V  +K+SPNG +LAS S +  +KIW      F +  +   LG+       +   LV++ 
Sbjct: 31  AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSA- 89
Query: 381 GKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWN 433
              D +LK+W+      ++ LK H   +     +P    + + S DE++ IW+
Sbjct: 90  -SDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 141

>pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308

Iteration: 1
 Score = 65.9 bits (159), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 243 YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWN--GNLLSCG 300
           Y+ C  + P++ +L V+ +  E + +W  +  + ++ L  H   V A+ +N  G+L+   
Sbjct: 105 YVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSS 163
Query: 301 TIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRY-LASGSNNTVKIWDFRQ---- 355
           +  G    +D  +     T I  +   V  +K+SPNG+Y LA+  +NT+K+WD+ +    
Sbjct: 164 SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL 223
Query: 356 ---LDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAV 412
                 K     I       G + + S G +D  + +W      ++++L+ H + ++S  
Sbjct: 224 KTYTGHKNEKYCIFANFSVTGGKWIVS-GSEDNLVYIWNLQTKEIVQKLQGHTDVVISTA 282
Query: 413 LSPDQTCVAAASA--DETISIW 432
             P +  +A+A+   D+TI +W
Sbjct: 283 CHPTENIIASAALENDKTIKLW 304

>pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 10/126 (7%)
Query: 316 DYPTAITREG--DVVCGLKWSPNGRYLASGS-NNTVKIW-----DFRQLDAKRPLGLIVP 367
           +Y    T  G    V  +K+SPNG +LAS S +  +KIW      F +  +   LG+   
Sbjct: 8   NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 67
Query: 368 KLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADE 427
               +   LV++    D +LK+W+      ++ LK H   +     +P    + + S DE
Sbjct: 68  AWSSDSNLLVSA--SDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 125
Query: 428 TISIWN 433
           ++ IW+
Sbjct: 126 SVRIWD 131

>pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336

Iteration: 1
 Score = 65.9 bits (159), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 243 YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWN--GNLLSCG 300
           Y+ C  + P++ +L V+ +  E + +W  +  + ++ L  H   V A+ +N  G+L+   
Sbjct: 133 YVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSS 191
Query: 301 TIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRY-LASGSNNTVKIWDFRQ---- 355
           +  G    +D  +     T I  +   V  +K+SPNG+Y LA+  +NT+K+WD+ +    
Sbjct: 192 SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL 251
Query: 356 ---LDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAV 412
                 K     I       G + + S G +D  + +W      ++++L+ H + ++S  
Sbjct: 252 KTYTGHKNEKYCIFANFSVTGGKWIVS-GSEDNLVYIWNLQTKEIVQKLQGHTDVVISTA 310
Query: 413 LSPDQTCVAAASA--DETISIW 432
             P +  +A+A+   D+TI +W
Sbjct: 311 CHPTENIIASAALENDKTIKLW 332

>pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 8/113 (7%)
Query: 327 VVCGLKWSPNGRYLASGS-NNTVKIW-----DFRQLDAKRPLGLIVPKLKREGRELVTSH 380
            V  +K+SPNG +LAS S +  +KIW      F +  +   LG+       +   LV++ 
Sbjct: 49  AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSA- 107
Query: 381 GKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWN 433
              D +LK+W+      ++ LK H   +     +P    + + S DE++ IW+
Sbjct: 108 -SDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 159

>pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315

Iteration: 1
 Score = 65.9 bits (159), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 243 YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWN--GNLLSCG 300
           Y+ C  + P++ +L V+ +  E + +W  +  + ++ L  H   V A+ +N  G+L+   
Sbjct: 112 YVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSS 170
Query: 301 TIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRY-LASGSNNTVKIWDFRQ---- 355
           +  G    +D  +     T I  +   V  +K+SPNG+Y LA+  +NT+K+WD+ +    
Sbjct: 171 SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL 230
Query: 356 ---LDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAV 412
                 K     I       G + + S G +D  + +W      ++++L+ H + ++S  
Sbjct: 231 KTYTGHKNEKYCIFANFSVTGGKWIVS-GSEDNLVYIWNLQTKEIVQKLQGHTDVVISTA 289
Query: 413 LSPDQTCVAAASA--DETISIW 432
             P +  +A+A+   D+TI +W
Sbjct: 290 CHPTENIIASAALENDKTIKLW 311

>pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 10/126 (7%)
Query: 316 DYPTAITREG--DVVCGLKWSPNGRYLASGS-NNTVKIW-----DFRQLDAKRPLGLIVP 367
           +Y    T  G    V  +K+SPNG +LA+ S +  +KIW      F +  +   LG+   
Sbjct: 15  NYALKFTLAGHTKAVSSVKFSPNGEWLAASSADKLIKIWGAYDGKFEKTISGHKLGISDV 74
Query: 368 KLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADE 427
               +   LV++    D +LK+W+      ++ LK H   +     +P    + + S DE
Sbjct: 75  AWSSDSNLLVSA--SDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 132
Query: 428 TISIWN 433
           ++ IW+
Sbjct: 133 SVRIWD 138

>pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315

Iteration: 1
 Score = 65.1 bits (157), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 97/202 (48%), Gaps = 14/202 (6%)
Query: 243 YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWN--GNLLSCG 300
           Y+ C  + P++ +L V+ +  E + +W  +    ++ L  H   V A+ +N  G+L+   
Sbjct: 112 YVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGMCLKTLPAHSDPVSAVHFNRDGSLIVSS 170
Query: 301 TIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRY-LASGSNNTVKIWDFRQ---- 355
           +  G    +D  +     T I  +   V  +K+SPNG+Y LA+  +NT+K+WD+ +    
Sbjct: 171 SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL 230
Query: 356 ---LDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAV 412
                 K     I       G + + S G +D  + +W      ++++L+ H + ++S  
Sbjct: 231 KTYTGHKNEKYCIFANFSVTGGKWIVS-GSEDNMVYIWNLQTKEIVQKLQGHTDVVISTA 289
Query: 413 LSPDQTCVAAASA--DETISIW 432
             P +  +A+A+   D+TI +W
Sbjct: 290 CHPTENIIASAALENDKTIKLW 311

>pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 10/126 (7%)
Query: 316 DYPTAITREG--DVVCGLKWSPNGRYLASGS-NNTVKIW-----DFRQLDAKRPLGLIVP 367
           +Y    T  G    V  +K+SPNG +LAS S +  +KIW      F +  +   LG+   
Sbjct: 15  NYALMFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 74
Query: 368 KLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADE 427
               +   LV++    D +LK+W+      ++ LK H   +     +P    + + S DE
Sbjct: 75  AWSSDSNLLVSA--SDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 132
Query: 428 TISIWN 433
           ++ IW+
Sbjct: 133 SVRIWD 138

>pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 243 YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWN--GNLLSCG 300
           Y+ C  + P++ +L V+ +  E + +W  +  + ++ L  H   V A+ +N  G+L+   
Sbjct: 112 YVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSS 170
Query: 301 TIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRY-LASGSNNTVKIWDFRQ---- 355
           +  G    +D  +     T I  +   V  +K+SPNG+Y LA+  +NT+K+WD+ +    
Sbjct: 171 SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL 230
Query: 356 ---LDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAV 412
                 K     I       G + + S G +D  + +W      ++++L+ H + ++S  
Sbjct: 231 KTYTGHKNEKYCIFANFSVTGGKWIVS-GSEDNLVYIWNLQTKEIVQKLQGHTDVVISTA 289
Query: 413 LSPDQTCVAAASA--DETISIW 432
             P +  +A+A+   D+TI ++
Sbjct: 290 CHPTENIIASAALENDKTIKLY 311

>pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 10/126 (7%)
Query: 316 DYPTAITREG--DVVCGLKWSPNGRYLASGS-NNTVKIW-----DFRQLDAKRPLGLIVP 367
           +Y    T  G    V  +K+SPNG +LAS S +  +KIW      F +  +   LG+   
Sbjct: 15  NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 74
Query: 368 KLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADE 427
               +   LV++    D +LK+W+      ++ LK H   +     +P    + + S DE
Sbjct: 75  AWSSDSNLLVSA--SDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 132
Query: 428 TISIWN 433
           ++ IW+
Sbjct: 133 SVRIWD 138

>pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 96/202 (47%), Gaps = 14/202 (6%)
Query: 243 YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWN--GNLLSCG 300
           Y+ C  + P++ +L V+ +  E + +W  +    ++ L  H   V A+ +N  G+L+   
Sbjct: 112 YVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGMCLKTLPAHSDPVSAVHFNRDGSLIVSS 170
Query: 301 TIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRY-LASGSNNTVKIWDFRQ---- 355
           +  G    +D  +     T I  +   V  +K+SPNG+Y LA+  +N +K+WD+ +    
Sbjct: 171 SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNDLKLWDYSKGKCL 230
Query: 356 ---LDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAV 412
                 K     I       G + + S G +D  + +W      ++++L+ H + ++S  
Sbjct: 231 KTYTGHKNEKYCIFANFSVTGGKWIVS-GSEDNMVYIWNLQTKEIVQKLQGHTDVVISTA 289
Query: 413 LSPDQTCVAAASA--DETISIW 432
             P +  +A+A+   D+TI +W
Sbjct: 290 CHPTENIIASAALENDKTIKLW 311

>pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 10/126 (7%)
Query: 316 DYPTAITREG--DVVCGLKWSPNGRYLASGS-NNTVKIW-----DFRQLDAKRPLGLIVP 367
           +Y    T  G    V  +K+SPNG +LAS S +  +KIW      F +  +   LG+   
Sbjct: 15  NYALMFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 74
Query: 368 KLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADE 427
               +   LV++    D +LK+W+      ++ LK H   +     +P    + + S DE
Sbjct: 75  AWSSDSNLLVSA--SDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 132
Query: 428 TISIWN 433
           ++ IW+
Sbjct: 133 SVRIWD 138

>pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 243 YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWN--GNLLSCG 300
           Y+ C  + P++ +L V+ +  E + +W  +  + ++ L  H   V A+ +N  G+L+   
Sbjct: 112 YVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSS 170
Query: 301 TIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRY-LASGSNNTVKIWDFRQ---- 355
           +  G    +D  +     T I  +   V  +K+SPNG+Y LA+  +NT+K+WD+ +    
Sbjct: 171 SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL 230
Query: 356 ---LDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAV 412
                 K     I       G + + S G +D  + +W      ++++L+ H + ++S  
Sbjct: 231 KTYTGHKNEKYCIFANFSVTGGKWIVS-GSEDNLVYIWNLQTKEIVQKLQGHTDVVISTA 289
Query: 413 LSPDQTCVAAASA--DETISIW 432
             P +  +A+A+   D+TI ++
Sbjct: 290 CHPTENIIASAALENDKTIKLF 311

>pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 10/126 (7%)
Query: 316 DYPTAITREG--DVVCGLKWSPNGRYLASGS-NNTVKIW-----DFRQLDAKRPLGLIVP 367
           +Y    T  G    V  +K+SPNG +LAS S +  +KIW      F +  +   LG+   
Sbjct: 15  NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 74
Query: 368 KLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADE 427
               +   LV++    D +LK+W+      ++ LK H   +     +P    + + S DE
Sbjct: 75  AWSSDSNLLVSA--SDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 132
Query: 428 TISIWN 433
           ++ IW+
Sbjct: 133 SVRIWD 138

>pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577

Iteration: 1
 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 90/431 (20%), Positives = 184/431 (42%), Gaps = 58/431 (13%)
Query: 32  ITREGDVVCGLKWSPNGRYLASGSNN-TVKIWDFRQLDAKRPQVNNQC--HLSAVKAIAW 88
           +T     V G+ +SP+G+ +AS S++ TVK+W+      +  Q+      H S+V+ +A+
Sbjct: 176 LTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN------RNGQLLQTLTGHSSSVRGVAF 229
Query: 89  CPWEPTLLATGGGICDQTVRLWN--------------SMNGKE-KCHVKTDSQQANDETI 133
            P   T+ +      D+TV+LWN              S+NG   +   +T +  ++D+T+
Sbjct: 230 SPDGQTIASAS---DDKTVKLWNRNGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTV 286
Query: 134 SYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAP 193
               +  +   +   H   +      +   +T++     +T+    R  +        + 
Sbjct: 287 KLWNRNGQLLQTLTGHSSSV-WGVAFSPDGQTIASASDDKTVKLWNRNGQHLQTLTGHSS 345
Query: 194 SIINDFYTSGLDWGY-----HDTLAVALDT-SVYTWNTKTNKTQLLVEYPTYDNAYISCV 247
           S+          WG        T+A A D  +V  WN    +   L++  T  ++ +  V
Sbjct: 346 SV----------WGVAFSPDGQTIASASDDKTVKLWN----RNGQLLQTLTGHSSSVRGV 391
Query: 248 AWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNIL 307
           A+ P    +A + +  + + LW+   + L+Q L  H   V  + ++ +  +  +   +  
Sbjct: 392 AFSPDGQTIA-SASDDKTVKLWNRNGQ-LLQTLTGHSSSVWGVAFSPDDQTIASASDDKT 449
Query: 308 HYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNN-TVKIWD----FRQLDAKRPL 362
                 +      +T     V G+ +SP+G+ +AS S++ TVK+W+      Q       
Sbjct: 450 VKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSS 509
Query: 363 GLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAA 422
            +       +G+ + ++    D ++K+W      L++ L  H   +     SPD   +A+
Sbjct: 510 SVRGVAFSPDGQTIASA--SDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIAS 566
Query: 423 ASADETISIWN 433
           AS+D+T+ +WN
Sbjct: 567 ASSDKTVKLWN 577

>pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 50/224 (22%), Positives = 103/224 (45%), Gaps = 18/224 (8%)
Query: 217 DTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERL 276
           D +V  WN    +   L++  T  ++ +  VA+ P    +A + +  + + LW+   + L
Sbjct: 119 DKTVKLWN----RNGQLLQTLTGHSSSVWGVAFSPDGQTIA-SASDDKTVKLWNRNGQ-L 172
Query: 277 IQKLRTHMHQV--IAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWS 334
           +Q L  H   V  +A   +G  ++  +    +  ++   +      +T     V G+ +S
Sbjct: 173 LQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN--RNGQLLQTLTGHSSSVRGVAFS 230
Query: 335 PNGRYLASGSNN-TVKIWD----FRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKM 389
           P+G+ +AS S++ TVK+W+      Q        +     + +G+ + ++    D ++K+
Sbjct: 231 PDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVNGVAFRPDGQTIASA--SDDKTVKL 288
Query: 390 WEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWN 433
           W      L++ L  H   +     SPD   +A+AS D+T+ +WN
Sbjct: 289 WNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN 331

>pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 328 VCGLKWSPNGRYLASGSNN-TVKIWD----FRQLDAKRPLGLIVPKLKREGRELVTSHGK 382
           V G+ +SP+G+ +AS S++ TVK+W+      Q        +       +G+ + ++   
Sbjct: 19  VRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASA--S 76
Query: 383 QDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWN 433
            D ++K+W      L++ L  H   +     SPD   +A+AS D+T+ +WN
Sbjct: 77  DDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWN 126

>pdb|2PBI|B Chain B, The Multifunctional Nature Of Gbeta5RGS9 REVEALED FROM ITS CRYSTAL Structure Length = 354

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 15/177 (8%)
Query: 268 LWHEQEERLIQKLRTHMHQVIAM----CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITR 323
           LW  +  +L+Q    H   V+ +       GN    G      + +D+R+        T 
Sbjct: 180 LWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETH 239
Query: 324 EGDVVCGLKWSPNGRYLASGSNN-TVKIWDFRQ-----LDAKRPL--GLIVPKLKREGRE 375
           E DV   +++ P+G   ASGS++ T +++D R      + +K  +  G         GR 
Sbjct: 240 ESDVN-SVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRL 298
Query: 376 LVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIW 432
           L    G  D ++ +W+  +   +  L  H+ R+ +  +SPD T   + S D T+ +W
Sbjct: 299 LFA--GYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 353

>pdb|1ERJ|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1 Length = 393

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 11/134 (8%)
Query: 328 VCGLKWSPNGRYLASGSNN-TVKIWDFRQLDAKRPLGL---IVPKLKREGRELVTSHGKQ 383
           +  L + P+G  L SGS + TV+IWD R       L +   +       G     + G  
Sbjct: 168 IYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSL 227
Query: 384 DCSLKMWEYPRLHLIEELKI-------HQERILSAVLSPDQTCVAAASADETISIWNCFP 436
           D ++++W+     L+E L         H++ + S V + D   V + S D ++ +WN   
Sbjct: 228 DRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQN 287
Query: 437 RDKKRKARQVGSGS 450
            + K  ++   SG+
Sbjct: 288 ANNKSDSKTPNSGT 301

>pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/136 (23%), Positives = 67/136 (49%), Gaps = 8/136 (5%)
Query: 316 DYPTAITREGDVVCGLKWSPNGRYLASGSNN-TVKIWDFRQLDAKRPL-----GLIVPKL 369
           D+   +    D V  + +  +G+ LAS S + T+K+WDF+  +  R +      +    +
Sbjct: 141 DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSI 200
Query: 370 KREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETI 429
              G  +V++   +D ++KMWE    + ++    H+E +     + D T +A+ S D+T+
Sbjct: 201 MPNGDHIVSA--SRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTV 258
Query: 430 SIWNCFPRDKKRKARQ 445
            +W    ++ K + R+
Sbjct: 259 RVWVVATKECKAELRE 274

>pdb|2BCJ|B Chain B, Crystal Structure Of G Protein-coupled Receptor Kinase 2 In Complex With Galpha-q And Gbetagamma Subunits Length = 340

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 77/182 (42%), Gaps = 14/182 (7%)
Query: 263 TEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTA 320
           T  ID     + R  + LR H+ ++ AM W  +  LL   +  G ++ +D  T ++   A
Sbjct: 34  TNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYT-TNKVHA 92
Query: 321 ITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFR----QLDAKRPL----GLIVPKLKR 371
           I      V    ++P+G Y+A G  +N   I++ +     +   R L    G +      
Sbjct: 93  IPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFL 152
Query: 372 EGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISI 431
           +  ++VTS G   C+L  W+            H   ++S  L+PD     + + D +  +
Sbjct: 153 DDNQIVTSSGDTTCAL--WDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKL 210
Query: 432 WN 433
           W+
Sbjct: 211 WD 212

>pdb|1GG2|B Chain B, G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Beta_1 Gamma_2 With Gdp Bound Length = 340

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 77/182 (42%), Gaps = 14/182 (7%)
Query: 263 TEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTA 320
           T  ID     + R  + LR H+ ++ AM W  +  LL   +  G ++ +D  T ++   A
Sbjct: 34  TNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYT-TNKVHA 92
Query: 321 ITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFR----QLDAKRPL----GLIVPKLKR 371
           I      V    ++P+G Y+A G  +N   I++ +     +   R L    G +      
Sbjct: 93  IPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFL 152
Query: 372 EGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISI 431
           +  ++VTS G   C+L  W+            H   ++S  L+PD     + + D +  +
Sbjct: 153 DDNQIVTSSGDTTCAL--WDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKL 210
Query: 432 WN 433
           W+
Sbjct: 211 WD 212

>pdb|3SN6|B Chain B, Crystal Structure Of The Beta2 Adrenergic Receptor-Gs Protein Complex Length = 351

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 77/182 (42%), Gaps = 14/182 (7%)
Query: 263 TEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTA 320
           T  ID     + R  + LR H+ ++ AM W  +  LL   +  G ++ +D  T ++   A
Sbjct: 45  TNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYT-TNKVHA 103
Query: 321 ITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFR----QLDAKRPL----GLIVPKLKR 371
           I      V    ++P+G Y+A G  +N   I++ +     +   R L    G +      
Sbjct: 104 IPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFL 163
Query: 372 EGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISI 431
           +  ++VTS G   C+L  W+            H   ++S  L+PD     + + D +  +
Sbjct: 164 DDNQIVTSSGDTTCAL--WDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKL 221
Query: 432 WN 433
           W+
Sbjct: 222 WD 223

>pdb|1GOT|B Chain B, Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimera And The Gt-Beta-Gamma Subunits Length = 340

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 77/182 (42%), Gaps = 14/182 (7%)
Query: 263 TEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTA 320
           T  ID     + R  + LR H+ ++ AM W  +  LL   +  G ++ +D  T ++   A
Sbjct: 34  TNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYT-TNKVHA 92
Query: 321 ITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFR----QLDAKRPL----GLIVPKLKR 371
           I      V    ++P+G Y+A G  +N   I++ +     +   R L    G +      
Sbjct: 93  IPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFL 152
Query: 372 EGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISI 431
           +  ++VTS G   C+L  W+            H   ++S  L+PD     + + D +  +
Sbjct: 153 DDNQIVTSSGDTTCAL--WDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKL 210
Query: 432 WN 433
           W+
Sbjct: 211 WD 212

>pdb|1A0R|B Chain B, Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-Gamma Length = 340

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 77/182 (42%), Gaps = 14/182 (7%)
Query: 263 TEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTA 320
           T  ID     + R  + LR H+ ++ AM W  +  LL   +  G ++ +D  T ++   A
Sbjct: 34  TNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYT-TNKVHA 92
Query: 321 ITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFR----QLDAKRPL----GLIVPKLKR 371
           I      V    ++P+G Y+A G  +N   I++ +     +   R L    G +      
Sbjct: 93  IPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFL 152
Query: 372 EGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISI 431
           +  ++VTS G   C+L  W+            H   ++S  L+PD     + + D +  +
Sbjct: 153 DDNQIVTSSGDTTCAL--WDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKL 210
Query: 432 WN 433
           W+
Sbjct: 211 WD 212

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	488
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	100.0
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	100.0
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	100.0
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	100.0
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	100.0
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	100.0
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	100.0
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	100.0
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	100.0
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	100.0
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	100.0
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	100.0
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	100.0
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	100.0
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	100.0
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	100.0
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	100.0
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	100.0
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	100.0
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	100.0
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	100.0
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	100.0
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	100.0
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	100.0
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	100.0
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	100.0
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	100.0
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	100.0
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	100.0
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	100.0
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	100.0
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	100.0
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	100.0
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	100.0
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	100.0
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	100.0
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	100.0
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	100.0
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	100.0
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	100.0
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	100.0
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	100.0
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	100.0
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	100.0
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	100.0
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	100.0
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	100.0
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	100.0
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	100.0
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	100.0
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	100.0
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	100.0
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	100.0
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	100.0
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	100.0
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	100.0
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	100.0
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	100.0
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	100.0
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	100.0
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	100.0
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	100.0
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	100.0
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	100.0
2pm7_B	297	Protein transport protein SEC13, protein transport	100.0
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	100.0
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	100.0
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	100.0
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	100.0
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	100.0
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	100.0
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	100.0
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	100.0
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	100.0
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	100.0
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	100.0
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	100.0
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	100.0
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	100.0
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	100.0
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	100.0
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	100.0
2pm7_B	297	Protein transport protein SEC13, protein transport	100.0
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	100.0
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	100.0
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	100.0
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	100.0
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	100.0
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	100.0
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	100.0
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	100.0
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	100.0
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	100.0
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	100.0
3jrp_A	379	Fusion protein of protein transport protein SEC13	100.0
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	100.0
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	100.0
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	100.0
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	100.0
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	100.0
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	100.0
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	100.0
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	100.0
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	100.0
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	100.0
3jrp_A	379	Fusion protein of protein transport protein SEC13	100.0
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	100.0
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	100.0
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	100.0
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	100.0
3jro_A	753	Fusion protein of protein transport protein SEC13	100.0
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	100.0
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	100.0
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	100.0
1k32_A	1045	Tricorn protease; protein degradation, substrate g	100.0
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	99.98
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.98
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	99.97
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.97
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.97
3jro_A	753	Fusion protein of protein transport protein SEC13	99.97
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.97
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.97
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.97
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.96
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.96
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.96
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.95
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.95
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.95
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.94
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.94
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.94
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.94
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.92
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.92
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.92
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.92
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.92
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.91
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.91
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.91
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.9
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.9
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.9
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.9
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.88
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.88
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.88
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.88
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.87
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.87
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.86
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.86
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.86
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.85
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.85
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.85
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.84
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.83
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.81
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.81
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.79
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.78
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.78
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.77
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.77
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.76
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.76
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.76
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	99.74
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.72
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.72
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.7
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.7
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.69
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.69
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.69
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.69
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.69
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.68
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.67
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	99.67
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	99.67
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	99.65
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.64
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.63
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.62
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	99.62
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.6
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.59
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.58
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.58
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.58
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.57
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.56
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.54
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.51
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	99.51
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.5
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	99.47
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	99.46
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	99.43
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.43
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	99.42
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.41
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	99.41
2qe8_A	343	Uncharacterized protein; structural genomics, join	99.41
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.39
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	99.39
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	99.38
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.38
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.38
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	99.38
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	99.37
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.35
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	99.34
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	99.33
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	99.31
2ece_A	462	462AA long hypothetical selenium-binding protein;	99.28
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	99.27
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	99.26
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	99.25
4a2l_A	795	BT_4663, two-component system sensor histidine kin	99.24
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	99.24
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	99.24
2qe8_A	343	Uncharacterized protein; structural genomics, join	99.21
4a2l_A	795	BT_4663, two-component system sensor histidine kin	99.2
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	99.17
2ece_A	462	462AA long hypothetical selenium-binding protein;	99.16
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	99.15
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	99.11
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	99.1
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	99.09
3v9f_A	781	Two-component system sensor histidine kinase/RESP	99.07
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	99.07
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	99.04
3v9f_A	781	Two-component system sensor histidine kinase/RESP	99.01
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	99.0
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	98.98
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	98.96
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	98.94
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	98.89
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	98.89
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	98.88
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	98.84
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	98.84
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	98.83
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	98.82
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	98.82
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.81
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	98.79
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	98.77
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	98.73
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	98.73
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	98.72
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	98.7
2p4o_A	306	Hypothetical protein; putative lactonase, structur	98.66
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	98.65
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	98.64
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	98.64
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	98.63
2p4o_A	306	Hypothetical protein; putative lactonase, structur	98.63
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	98.62
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.6
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.6
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	98.58
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	98.56
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	98.53
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	98.49
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	98.46
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	98.46
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	98.45
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	98.39
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.39
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	98.36
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	98.36
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	98.33
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	98.31
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	98.27
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	98.24
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	98.24
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	98.24
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	98.08
3kya_A	496	Putative phosphatase; structural genomics, joint c	98.03
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	98.03
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	98.02
3kya_A	496	Putative phosphatase; structural genomics, joint c	97.97
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	97.9
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	97.87
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	97.87
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	97.75
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	97.7
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	97.69
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	97.69
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	97.66
3s25_A	302	Hypothetical 7-bladed beta-propeller-like protein;	97.61
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	97.6
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	97.57
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	97.57
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	97.56
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	97.51
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	97.49
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	97.47
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	97.45
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	97.45
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	97.41
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	97.36
1xi4_A	1630	Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle	97.33
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	97.32
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	97.21
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	97.13
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	97.13
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	97.09
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	97.09
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	96.93
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	96.88
1xi4_A	1630	Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle	96.84
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	96.76
3s25_A	302	Hypothetical 7-bladed beta-propeller-like protein;	96.71
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	96.68
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	96.68
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	96.63
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	96.41
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	96.27
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	96.13
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	95.89
3sbq_A	638	Nitrous-oxide reductase; beta-propeller, cupredoxi	95.73
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	95.53
3ott_A	758	Two-component system sensor histidine kinase; beta	95.06
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	94.66
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	94.46
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	94.41
3ott_A	758	Two-component system sensor histidine kinase; beta	93.42
3qhy_B	282	Beta-lactamase inhibitory protein II; enyzme-inhib	93.38
3sbq_A	638	Nitrous-oxide reductase; beta-propeller, cupredoxi	93.08
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	92.93
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	92.1
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	91.9
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	90.57
3q6k_A	381	43.2 kDa salivary protein; beta propeller, binding	88.77
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	87.31
3qhy_B	282	Beta-lactamase inhibitory protein II; enyzme-inhib	85.14
4hvt_A	711	Ritya.17583.B, post-proline cleaving enzyme; ssgci	82.59

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=100.00  E-value=4.5e-55  Score=424.82  Aligned_cols=392  Identities=16%  Similarity=0.214  Sum_probs=310.6

Q ss_pred             ccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccc
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHL   80 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~   80 (488)
                      +.||++||+++ ++.|+|||+.+++ ....+.+|...|++++|+|+|++||+|+ |++|+|||+.+++. .....+.+|.
T Consensus        27 spdg~~l~~~~-~~~v~l~~~~~~~-~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~-~~~~~~~~~~  103 (611)
T 1nr0_A           27 TPAGDKIQYCN-GTSVYTVPVGSLT-DTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTH-ILKTTIPVFS  103 (611)
T ss_dssp             CTTSSEEEEEE-TTEEEEEETTCSS-CCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTC-CEEEEEECSS
T ss_pred             CCCCCEEEeCC-CCEEEEecCCCcc-cCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcc-eeeEeecccC
Confidence            45899999987 6799999998776 4467899999999999999999999998 99999999975432 2334567899


Q ss_pred             cceeEEEEecCCCeEEeeeCCc-ccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeecccccee
Q psy14511         81 SAVKAIAWCPWEPTLLATGGGI-CDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVL  159 (488)
Q Consensus        81 ~~v~~l~~~~~~~~l~~~~~~~-~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (488)
                      ++|.+++|+|+++.|++++... .++.|++||  .++....+.++...+                               
T Consensus       104 ~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd--~~~~~~~l~gh~~~v-------------------------------  150 (611)
T 1nr0_A          104 GPVKDISWDSESKRIAAVGEGRERFGHVFLFD--TGTSNGNLTGQARAM-------------------------------  150 (611)
T ss_dssp             SCEEEEEECTTSCEEEEEECCSSCSEEEEETT--TCCBCBCCCCCSSCE-------------------------------
T ss_pred             CceEEEEECCCCCEEEEEECCCCceeEEEEee--CCCCcceecCCCCCc-------------------------------
Confidence            9999999999999888877520 014677777  455444444443322                               


Q ss_pred             ccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCC---cEEEEECCCeEEEEECCCCceEEEEec
Q psy14511        160 NQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYH---DTLAVALDTSVYTWNTKTNKTQLLVEY  236 (488)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~v~iw~~~~~~~~~~~~~  236 (488)
                                                                ..+.|+++   .+++++.|+.|++||..+++....+  
T Consensus       151 ------------------------------------------~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l--  186 (611)
T 1nr0_A          151 ------------------------------------------NSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTF--  186 (611)
T ss_dssp             ------------------------------------------EEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEE--
T ss_pred             ------------------------------------------eEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeee--
Confidence                                                      23334332   4788889999999999888765554  


Q ss_pred             CCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeec-------cccccEEEEEe--cCCEEEEeecCCeEE
Q psy14511        237 PTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLR-------THMHQVIAMCW--NGNLLSCGTIGGNIL  307 (488)
Q Consensus       237 ~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~-------~~~~~v~~~~~--~~~~l~~~~~dg~i~  307 (488)
                      .+ |...|.+++|+|++++|+++ +.|++|++||+.+++.+..+.       +|...|.+++|  ++++|++++.|+.|+
T Consensus       187 ~~-H~~~V~~v~fspdg~~las~-s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~  264 (611)
T 1nr0_A          187 GE-HTKFVHSVRYNPDGSLFAST-GGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIK  264 (611)
T ss_dssp             CC-CSSCEEEEEECTTSSEEEEE-ETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred             cc-ccCceEEEEECCCCCEEEEE-ECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEE
Confidence            44 89999999999999999999 999999999999988888774       79999999999  789999999999999


Q ss_pred             EEECcCCCc------------------------------------------cceeeecCCccEEEEEEccCCcEEEEEe-
Q psy14511        308 HYDVRTHSD------------------------------------------YPTAITREGDVVCGLKWSPNGRYLASGS-  344 (488)
Q Consensus       308 i~d~~~~~~------------------------------------------~~~~~~~~~~~i~~~~~s~~~~~l~~~~-  344 (488)
                      +||+++++.                                          ....+.+|...|.+++|+|+|++|++++ 
T Consensus       265 lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~  344 (611)
T 1nr0_A          265 IWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADA  344 (611)
T ss_dssp             EEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred             EEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeC
Confidence            999986431                                          1123457889999999999999999999 


Q ss_pred             cCeEEEEECCCCCCCccc--------------------------------------------------------------
Q psy14511        345 NNTVKIWDFRQLDAKRPL--------------------------------------------------------------  362 (488)
Q Consensus       345 d~~i~iwd~~~~~~~~~~--------------------------------------------------------------  362 (488)
                      |+.|++||+.+++....+                                                              
T Consensus       345 D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~  424 (611)
T 1nr0_A          345 EGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGD  424 (611)
T ss_dssp             TSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSS
T ss_pred             CCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCc
Confidence            699999998764321110                                                              


Q ss_pred             -------------------------ceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcce--eEEEeeccccEEEEEEcC
Q psy14511        363 -------------------------GLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHL--IEELKIHQERILSAVLSP  415 (488)
Q Consensus       363 -------------------------~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~--~~~~~~~~~~v~~~~~s~  415 (488)
                                               .....+|+|+|+++++  |+.|++|++||+.+++.  +.. .+|...|++++|+|
T Consensus       425 ~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~las--gs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fsp  501 (611)
T 1nr0_A          425 IAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAV--GGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSN  501 (611)
T ss_dssp             CEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEE--EETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECT
T ss_pred             EEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEE--eCCCCeEEEEEccCCceeeeec-cCCCCceEEEEECC
Confidence                                     0001278999999999  78999999999987643  334 67999999999999


Q ss_pred             CCCEEEEEeCCCcEEEEecCC-CCccc--cc-cccCCcceEEeecCCCceEEEEeeecccccceeeEEEEeecc
Q psy14511        416 DQTCVAAASADETISIWNCFP-RDKKR--KA-RQVGSGSSLEFAILKQPVSLTALLRSRAVEKQQHAIAYTVFG  485 (488)
Q Consensus       416 ~~~~l~t~~~dg~v~iw~~~~-~~~~~--~~-~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g  485 (488)
                      |+++|++++.|+.|++|++.+ ++...  .. .|...|.+++|+|+++.++       .++.|..+.+|..++|
T Consensus       502 dg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~la-------sgs~D~~v~lW~~~~~  568 (611)
T 1nr0_A          502 NGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLA-------TGSLDNSVIVWNMNKP  568 (611)
T ss_dssp             TSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEE-------EEETTSCEEEEETTCT
T ss_pred             CCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEE-------EEECCCcEEEEECCCc
Confidence            999999999999999999987 54432  22 3899999999999998873       3445556666665544

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=100.00  E-value=4e-54  Score=418.15  Aligned_cols=393  Identities=16%  Similarity=0.225  Sum_probs=308.0

Q ss_pred             CccCCceEEEeecCCeEEEEEcccCcc-cceeecccCceEEEEEEccCCcEEEEec-C----CeEEEEeccccCcCCCcc
Q psy14511          1 MCWNGNLLSCGTIGGNILHYDVRTHSD-YPTAITREGDVVCGLKWSPNGRYLASGS-N----NTVKIWDFRQLDAKRPQV   74 (488)
Q Consensus         1 ~~~dg~~la~g~~dg~i~iwd~~~~~~-~~~~~~~h~~~V~~l~~sp~g~~las~~-d----~~i~vwd~~~~~~~~~~~   74 (488)
                      +++||++||+|+.||+|+|||+.+++. ....+.+|.++|.+++|+|+|++||+++ +    +.|++||...     ...
T Consensus        67 ~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~-----~~~  141 (611)
T 1nr0_A           67 TSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGT-----SNG  141 (611)
T ss_dssp             ECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCC-----BCB
T ss_pred             ECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCC-----Ccc
Confidence            356999999999999999999976543 3346789999999999999999999887 3    4788888432     344


Q ss_pred             cccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeecc
Q psy14511         75 NNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEID  154 (488)
Q Consensus        75 ~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (488)
                      .+.+|...|.+++|+|++++++++++.  |++|++||..+++....+..|...+..+.++++                  
T Consensus       142 ~l~gh~~~v~~v~f~p~~~~~l~s~s~--D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspd------------------  201 (611)
T 1nr0_A          142 NLTGQARAMNSVDFKPSRPFRIISGSD--DNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPD------------------  201 (611)
T ss_dssp             CCCCCSSCEEEEEECSSSSCEEEEEET--TSCEEEEETTTBEEEEEECCCSSCEEEEEECTT------------------
T ss_pred             eecCCCCCceEEEECCCCCeEEEEEeC--CCeEEEEECCCCeEeeeeccccCceEEEEECCC------------------
Confidence            578899999999999999864555553  999999999888877777666544433333322                  


Q ss_pred             ccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEE
Q psy14511        155 RKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLV  234 (488)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~  234 (488)
                                                                           +..+++++.|+.|++||+.+++....+
T Consensus       202 -----------------------------------------------------g~~las~s~D~~i~lwd~~~g~~~~~~  228 (611)
T 1nr0_A          202 -----------------------------------------------------GSLFASTGGDGTIVLYNGVDGTKTGVF  228 (611)
T ss_dssp             -----------------------------------------------------SSEEEEEETTSCEEEEETTTCCEEEEC
T ss_pred             -----------------------------------------------------CCEEEEEECCCcEEEEECCCCcEeeee
Confidence                                                                 245778889999999999998877665


Q ss_pred             ecC-----CCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeee-------------------------------
Q psy14511        235 EYP-----TYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQ-------------------------------  278 (488)
Q Consensus       235 ~~~-----~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~-------------------------------  278 (488)
                      ...     + |...|.+++|+|++++|+++ +.|++|++||+.+++.+.                               
T Consensus       229 ~~~~~~~~~-h~~~V~~v~~spdg~~l~s~-s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i  306 (611)
T 1nr0_A          229 EDDSLKNVA-HSGSVFGLTWSPDGTKIASA-SADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFI  306 (611)
T ss_dssp             BCTTSSSCS-SSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCE
T ss_pred             ccccccccc-cCCCEEEEEECCCCCEEEEE-eCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcE
Confidence            321     4 88999999999999999999 999999999998765543                               


Q ss_pred             ------------eeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCcccee------------------------
Q psy14511        279 ------------KLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTA------------------------  320 (488)
Q Consensus       279 ------------~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~------------------------  320 (488)
                                  .+.+|...|.+++|  ++++|++++.|+.|++||+.++......                        
T Consensus       307 ~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~  386 (611)
T 1nr0_A          307 NFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSW  386 (611)
T ss_dssp             EEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEET
T ss_pred             EEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEc
Confidence                        33468889999999  7899999999999999998764210000                        


Q ss_pred             ---------------------------------------------------------eecCCccEEEEEEccCCcEEEEE
Q psy14511        321 ---------------------------------------------------------ITREGDVVCGLKWSPNGRYLASG  343 (488)
Q Consensus       321 ---------------------------------------------------------~~~~~~~i~~~~~s~~~~~l~~~  343 (488)
                                                                               ...|...+.+++|+|||++||++
T Consensus       387 d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasg  466 (611)
T 1nr0_A          387 DDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVG  466 (611)
T ss_dssp             TTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEE
T ss_pred             CCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEe
Confidence                                                                     00123457889999999999999


Q ss_pred             e-cCeEEEEECCCCCCC--ccc----ceeeeeecCCCCEEEEEccCCCCeEEEEeCCC-cceeEE--EeeccccEEEEEE
Q psy14511        344 S-NNTVKIWDFRQLDAK--RPL----GLIVPKLKREGRELVTSHGKQDCSLKMWEYPR-LHLIEE--LKIHQERILSAVL  413 (488)
Q Consensus       344 ~-d~~i~iwd~~~~~~~--~~~----~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~-~~~~~~--~~~~~~~v~~~~~  413 (488)
                      + |+.|++||+......  ...    .....+|+|+|++|++  ++.|++|++||+.+ ++++..  +.+|...|++++|
T Consensus       467 s~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg~~las--~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~f  544 (611)
T 1nr0_A          467 GQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVA--TDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSW  544 (611)
T ss_dssp             ETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEE--EETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEE
T ss_pred             CCCCeEEEEEccCCceeeeeccCCCCceEEEEECCCCCEEEE--EcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEE
Confidence            9 699999999765321  110    1112299999999999  78999999999987 655543  3459999999999


Q ss_pred             cCCCCEEEEEeCCCcEEEEecCCCCcc---ccccc-cCCcceEEeecCCCceEEEEeeecccccceeeEEEEee
Q psy14511        414 SPDQTCVAAASADETISIWNCFPRDKK---RKARQ-VGSGSSLEFAILKQPVSLTALLRSRAVEKQQHAIAYTV  483 (488)
Q Consensus       414 s~~~~~l~t~~~dg~v~iw~~~~~~~~---~~~~~-~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~~  483 (488)
                      +||+++||+++.|++|++|++.+++..   ....| ...|.+++|+|+++ +       +.++.|..+.+|...
T Consensus       545 spdg~~lasgs~D~~v~lW~~~~~~~~~~~~~~~h~~~~v~~v~fs~d~~-l-------~s~~~D~~i~lW~~~  610 (611)
T 1nr0_A          545 SPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETT-I-------VSAGQDSNIKFWNVP  610 (611)
T ss_dssp             CTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEETTE-E-------EEEETTSCEEEEECC
T ss_pred             CCCCCEEEEEECCCcEEEEECCCcccccchhhccCcccCeeEEEEcCCCE-E-------EEecCCCCEEEEecc
Confidence            999999999999999999999986532   34567 78999999999986 4       345677788888753

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=100.00  E-value=5.3e-52  Score=402.87  Aligned_cols=423  Identities=21%  Similarity=0.328  Sum_probs=318.4

Q ss_pred             CccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEecccc------------
Q psy14511          1 MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQL------------   67 (488)
Q Consensus         1 ~~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~------------   67 (488)
                      ++.||++||+|+.|++|+|||. +++ ....+.+|.+.|++++|+|||++||+++ |++|+|||....            
T Consensus        24 ~spdg~~las~~~d~~v~iWd~-~~~-~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~~~~~~~~~~~~~~~v  101 (577)
T 2ymu_A           24 FSPDGQTIASASDDKTVKLWNR-NGQ-LLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSV  101 (577)
T ss_dssp             ECTTSSCEEEEETTSEEEEECT-TSC-EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCE
T ss_pred             ECCCCCEEEEEeCCCEEEEEEC-CCC-EEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCEEEEEECCCCCE
Confidence            3569999999999999999995 455 4467899999999999999999999998 999999996420            


Q ss_pred             --------------------------------------------------------------------------------
Q psy14511         68 --------------------------------------------------------------------------------   67 (488)
Q Consensus        68 --------------------------------------------------------------------------------   67 (488)
                                                                                                      
T Consensus       102 ~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (577)
T 2ymu_A          102 RGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSS  181 (577)
T ss_dssp             EEEEECTTSSEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSS
T ss_pred             EEEEECCCCCEEEEEcCCCceeecccccceeeeccCCCCceeeeeeecCCccceecccccceeccccceeeeeeccCCCc
Confidence                                                                                            


Q ss_pred             ---------------------------CcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeee
Q psy14511         68 ---------------------------DAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCH  120 (488)
Q Consensus        68 ---------------------------~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~  120 (488)
                                                 ...+.+..+.+|...|.+++|+|+++++++.+.   |+.|++||. +++.+..
T Consensus       182 ~v~~~~~~~~~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~---d~~i~~w~~-~~~~~~~  257 (577)
T 2ymu_A          182 SVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASD---DKTVKLWNR-NGQLLQT  257 (577)
T ss_dssp             CEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEET---TSCEEEECT-TSCEEEE
T ss_pred             ceeeeeecCCCCEEEEEcCCCEEEEEeCCCcEEEEEecCCCCEEEEEECCCCCEEEEEeC---CCEEEEEeC-CCCEEEE
Confidence                                       000011123456677888888888887777665   999999995 5667777


Q ss_pred             eecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccce
Q psy14511        121 VKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFY  200 (488)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (488)
                      +..+...+..+.+.++...   .+...    .-...+++.....                     ....+  ..  ....
T Consensus       258 ~~~~~~~v~~v~~~~d~~~---l~~~~----~d~~i~~w~~~~~---------------------~~~~~--~~--h~~~  305 (577)
T 2ymu_A          258 LTGHSSSVNGVAFRPDGQT---IASAS----DDKTVKLWNRNGQ---------------------LLQTL--TG--HSSS  305 (577)
T ss_dssp             ECCCSSCEEEEEECTTSSE---EEEEE----TTSCEEEEETTSC---------------------EEEEE--CC--CSSC
T ss_pred             EecCCCCEEEEEEcCCCCE---EEEEe----CCCEEEEEeCCCc---------------------EEEEE--ec--CCCC
Confidence            7777666666555554311   11100    0001111111110                     00000  01  1122


Q ss_pred             eeeeeeCC--CcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeee
Q psy14511        201 TSGLDWGY--HDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQ  278 (488)
Q Consensus       201 ~~~~~~~~--~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~  278 (488)
                      +..+.+++  ..+++++.|+.|++||........   +.+ |...+.+++|+|++++++++ +.++.+++||. +++.+.
T Consensus       306 v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~---~~~-~~~~v~~~~~s~~g~~l~~~-~~dg~v~~~~~-~~~~~~  379 (577)
T 2ymu_A          306 VWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQT---LTG-HSSSVWGVAFSPDGQTIASA-SDDKTVKLWNR-NGQLLQ  379 (577)
T ss_dssp             EEEEEECTTSSEEEEEETTSCEEEEETTSCEEEE---ECC-CSSCEEEEEECTTSSEEEEE-ETTSEEEEEET-TCCEEE
T ss_pred             eEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEE---EeC-CCCCEEEEEECCCCCEEEEE-eCCCEEEEEcC-CCCEEE
Confidence            33445544  567778899999999987665432   233 88899999999999999999 99999999996 457888


Q ss_pred             eeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCC
Q psy14511        279 KLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQ  355 (488)
Q Consensus       279 ~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~  355 (488)
                      .+.+|...|.+++|  ++++|++++.|+.|++||...  .....+..|...|.+++|+|++++|++++ |+.|++||...
T Consensus       380 ~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~--~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~  457 (577)
T 2ymu_A          380 TLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG--QLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNG  457 (577)
T ss_dssp             EEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTC--CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTS
T ss_pred             EecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCC--CEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCC
Confidence            88999999999999  789999999999999999643  46778889999999999999999999999 69999999753


Q ss_pred             CCCCccccee-----eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEE
Q psy14511        356 LDAKRPLGLI-----VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETIS  430 (488)
Q Consensus       356 ~~~~~~~~~~-----~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~  430 (488)
                      . ....+...     ..+|+|+++++++  ++.|+.|++||. +++++..+.+|...|++++|+||+++||+++.||.|+
T Consensus       458 ~-~~~~~~~~~~~v~~~~~spd~~~las--~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~  533 (577)
T 2ymu_A          458 Q-LLQTLTGHSSSVRGVAFSPDGQTIAS--ASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVK  533 (577)
T ss_dssp             C-EEEEEECCSSCEEEEEECTTSCEEEE--EETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEE
T ss_pred             C-EEEEEcCCCCCEEEEEEcCCCCEEEE--EeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEE
Confidence            2 22222111     2289999999999  788999999995 6889999999999999999999999999999999999


Q ss_pred             EEecCCCCccccccccCCcceEEeecCCCceEEEEeeecccccceeeEEE
Q psy14511        431 IWNCFPRDKKRKARQVGSGSSLEFAILKQPVSLTALLRSRAVEKQQHAIA  480 (488)
Q Consensus       431 iw~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~i~  480 (488)
                      +||..........+|.+.|.+++|+||++.+.       .++.|..+.+|
T Consensus       534 lwd~~~~~~~~~~~h~~~v~~~~fs~dg~~l~-------s~~~D~~i~~W  576 (577)
T 2ymu_A          534 LWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIA-------SASSDKTVKLW  576 (577)
T ss_dssp             EECTTSCEEEEEECCSSCEEEEEECTTSSCEE-------EEETTSCEEEE
T ss_pred             EEeCCCCEEEEEcCCCCCEEEEEEcCCCCEEE-------EEeCCCEEEEe
Confidence            99975444446678999999999999999873       34456556555

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=100.00  E-value=5.8e-48  Score=374.52  Aligned_cols=411  Identities=20%  Similarity=0.312  Sum_probs=303.0

Q ss_pred             ceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceE
Q psy14511         29 PTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTV  107 (488)
Q Consensus        29 ~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i  107 (488)
                      .+.|.+|.+.|++++|||||++||+|+ |+.|+|||.. +   +.+..+.+|.+.|++++|+||+++|++++.   |++|
T Consensus         9 ~~~L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~~-~---~~~~~l~gh~~~V~~l~fspdg~~las~~~---d~~i   81 (577)
T 2ymu_A            9 RNRLEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-G---QLLQTLTGHSSSVWGVAFSPDGQTIASASD---DKTV   81 (577)
T ss_dssp             EEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-S---CEEEEEECCSSCEEEEEECTTSSEEEEEET---TSCE
T ss_pred             eeEECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECC-C---CEEEEEeCCCCCEEEEEECCCCCEEEEEeC---CCEE
Confidence            356899999999999999999999998 9999999964 2   345668899999999999999998887776   9999


Q ss_pred             EEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEee----eeccccceecc--ccccccceeeecccccc---
Q psy14511        108 RLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHG----FEIDRKKVLNQ--SKRTVSPTQFLRTLGKL---  178 (488)
Q Consensus       108 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~--~~~~~~~~~~~~~~~~~---  178 (488)
                      ++||+ +++.+..+..+...+..+.++++...   .......+    +..........  ....+............   
T Consensus        82 ~vWd~-~~~~~~~~~~~~~~v~~~~~s~d~~~---l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~  157 (577)
T 2ymu_A           82 KLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQT---IASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASA  157 (577)
T ss_dssp             EEEET-TSCEEEEECCCSSCEEEEEECTTSSE---EEEEETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEE
T ss_pred             EEEEC-CCCEEEEEECCCCCEEEEEECCCCCE---EEEEcCCCceeecccccceeeeccCCCCceeeeeeecCCccceec
Confidence            99995 67888888888888887777765421   11111000    00000000000  00000000000000000   


Q ss_pred             -----cccccCCCceeecCCCccccceeeeeeeC--CCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcC
Q psy14511        179 -----PRKVKAKPERILEAPSIINDFYTSGLDWG--YHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKP  251 (488)
Q Consensus       179 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~  251 (488)
                           ...............  .....+..+.++  ...+++++.|+.|++||.. ++....+.  + |...|.+++|+|
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~~-~~~~~~~~--~-~~~~v~~~~~s~  231 (577)
T 2ymu_A          158 SDDKTVKLWNRNGQLLQTLT--GHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQTLT--G-HSSSVRGVAFSP  231 (577)
T ss_dssp             ETTSEEEEECTTSCEEEEEE--CCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-SCEEEEEE--C-CSSCEEEEEECT
T ss_pred             ccccceeccccceeeeeecc--CCCcceeeeeecCCCCEEEEEcCCCEEEEEeCC-CcEEEEEe--c-CCCCEEEEEECC
Confidence                 000000000000011  111223334444  4568888899999999964 44444433  3 888999999999


Q ss_pred             CCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEE
Q psy14511        252 RTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVC  329 (488)
Q Consensus       252 ~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~  329 (488)
                      ++++++++ +.|+.|++||.. ++.+..+.+|...|.+++|  +++.+++++.|+.|++||...  .....+.+|...|.
T Consensus       232 dg~~l~~~-~~d~~i~~w~~~-~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~--~~~~~~~~h~~~v~  307 (577)
T 2ymu_A          232 DGQTIASA-SDDKTVKLWNRN-GQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNG--QLLQTLTGHSSSVW  307 (577)
T ss_dssp             TSSCEEEE-ETTSCEEEECTT-SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS--CEEEEECCCSSCEE
T ss_pred             CCCEEEEE-eCCCEEEEEeCC-CCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCC--cEEEEEecCCCCeE
Confidence            99999999 899999999964 5778888999999999999  789999999999999999754  46677889999999


Q ss_pred             EEEEccCCcEEEEEe-cCeEEEEECCCCCCCccc----ceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeec
Q psy14511        330 GLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPL----GLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIH  404 (488)
Q Consensus       330 ~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~----~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~  404 (488)
                      +++|+|++++|++++ |+.|++||..........    .....+|+|+++++++  ++.|+.+++||. +++.+..+.+|
T Consensus       308 ~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~--~~~dg~v~~~~~-~~~~~~~~~~~  384 (577)
T 2ymu_A          308 GVAFSPDGQTIASASDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIAS--ASDDKTVKLWNR-NGQLLQTLTGH  384 (577)
T ss_dssp             EEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEE--EETTSEEEEEET-TCCEEEEEECC
T ss_pred             EEEECCCCCEEEEEeCCCeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEEEE--EeCCCEEEEEcC-CCCEEEEecCC
Confidence            999999999999999 599999998754322111    1112389999999999  789999999995 67888999999


Q ss_pred             cccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccccccccCCcceEEeecCCCceEE
Q psy14511        405 QERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKARQVGSGSSLEFAILKQPVSL  463 (488)
Q Consensus       405 ~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~  463 (488)
                      ...|++++|+||+++|++++.|+.|++||...........|...+.+++|+|+++.+..
T Consensus       385 ~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~  443 (577)
T 2ymu_A          385 SSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIAS  443 (577)
T ss_dssp             SSCEEEEEECTTSSCEEEEETTSEEEEECTTCCEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred             CCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEecCCCCCeEEEEECCCCCEEEE
Confidence            99999999999999999999999999999765444466788999999999999988754

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=100.00  E-value=1.8e-47  Score=402.81  Aligned_cols=448  Identities=16%  Similarity=0.213  Sum_probs=337.4

Q ss_pred             ccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccc
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHL   80 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~   80 (488)
                      +.||++||+|+.||+|+|||+.+++.+ ..+.+|.+.|.+++|+|+|++||+++ |+.|+|||+.+++   .+..+.+|.
T Consensus       624 s~~~~~l~s~~~d~~i~vw~~~~~~~~-~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~---~~~~~~~~~  699 (1249)
T 3sfz_A          624 SQDGQRIASCGADKTLQVFKAETGEKL-LDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGK---LVHTYDEHS  699 (1249)
T ss_dssp             CTTSSEEEEEETTSCEEEEETTTCCEE-EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC---EEEEEECCS
T ss_pred             CCCCCEEEEEeCCCeEEEEECCCCCEE-EEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCc---eEEEEcCCC
Confidence            458999999999999999999998854 56789999999999999999999998 9999999998754   455677899


Q ss_pred             cceeEEEEecCCC-eEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeecccccee
Q psy14511         81 SAVKAIAWCPWEP-TLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVL  159 (488)
Q Consensus        81 ~~v~~l~~~~~~~-~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (488)
                      ..|.+++|+|++. .++++++.  |+.|++||+.+++....+..+...+..+.+++++.   ..+.....    ....++
T Consensus       700 ~~v~~~~~~~~~~~~~l~sg~~--d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~---~l~s~s~d----g~v~vw  770 (1249)
T 3sfz_A          700 EQVNCCHFTNKSNHLLLATGSN--DFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDE---LLASCSAD----GTLRLW  770 (1249)
T ss_dssp             SCEEEEEECSSSSCCEEEEEET--TSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTT---EEEEEESS----SEEEEE
T ss_pred             CcEEEEEEecCCCceEEEEEeC--CCeEEEEECCCcchhheecCCCCCEEEEEEecCCC---EEEEEECC----CeEEEE
Confidence            9999999999533 34444443  99999999999999999988888887777776542   11111100    111222


Q ss_pred             ccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCC-CcEEEEECCCeEEEEECCCCceEEEEecCC
Q psy14511        160 NQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGY-HDTLAVALDTSVYTWNTKTNKTQLLVEYPT  238 (488)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~  238 (488)
                      ...............   .        ......+.......+.++.|++ +..++++.++.+.+||+.++......... 
T Consensus       771 d~~~~~~~~~~~~~~---~--------~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~-  838 (1249)
T 3sfz_A          771 DVRSANERKSINVKR---F--------FLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTG-  838 (1249)
T ss_dssp             EGGGTEEEEEEECCC---C--------C--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECS-
T ss_pred             eCCCCcccceecccc---c--------ccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCC-
Confidence            221111000000000   0        0000000011122344455554 45666667899999999999877665432 


Q ss_pred             CCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCC--
Q psy14511        239 YDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTH--  314 (488)
Q Consensus       239 ~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~--  314 (488)
                       |...+.+++|+|+++.++++ +.++.|++||+.++..+..+.+|...|.+++|  +++.+++++.||.|++||+...  
T Consensus       839 -~~~~v~~~~~sp~~~~l~~~-~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~  916 (1249)
T 3sfz_A          839 -HHSTIQYCDFSPYDHLAVIA-LSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCK  916 (1249)
T ss_dssp             -SSSCCCEEEECSSTTEEEEE-CSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHS
T ss_pred             -CCCceEEEEEcCCCCEEEEE-eCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccce
Confidence             88899999999999999999 99999999999999999999999999999999  6889999999999999985420  


Q ss_pred             ----------------------------------------------------------------------------Cccc
Q psy14511        315 ----------------------------------------------------------------------------SDYP  318 (488)
Q Consensus       315 ----------------------------------------------------------------------------~~~~  318 (488)
                                                                                                  ....
T Consensus       917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~  996 (1249)
T 3sfz_A          917 NSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVF  996 (1249)
T ss_dssp             CCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCE
T ss_pred             eeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCcee
Confidence                                                                                        1122


Q ss_pred             eeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCccccee----eeeecCCCCEEEEEccCCCCeEEEEeCC
Q psy14511        319 TAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLI----VPKLKREGRELVTSHGKQDCSLKMWEYP  393 (488)
Q Consensus       319 ~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~----~~~~~~~~~~l~~~~g~~~~~i~i~d~~  393 (488)
                      ..+..|...|.+++|+|++++|++++ |+.|++||+.+++........    ...|+|++.. ++  ++.|+.|++||+.
T Consensus       997 ~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~l-~~--~~~dg~v~vwd~~ 1073 (1249)
T 3sfz_A          997 SSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQDSRL-LS--WSFDGTVKVWNVI 1073 (1249)
T ss_dssp             EECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCBCCSSCEEEEEECSSSEE-EE--EESSSEEEEEETT
T ss_pred             eecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEecCCCcEEEEEEcCCCcE-EE--EECCCcEEEEECC
Confidence            33456888899999999999999998 699999999887543222111    1278887654 44  5789999999999


Q ss_pred             CcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcc-ccccccCCcceEEeecCCCceEEEEeeecccc
Q psy14511        394 RLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKK-RKARQVGSGSSLEFAILKQPVSLTALLRSRAV  472 (488)
Q Consensus       394 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~-~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~  472 (488)
                      +++.+..+.+|.+.|++++|+||+++|++++.||.|++||+.+++.. ....|.+.+.+++|+|+++.+..       ++
T Consensus      1074 ~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat-------~~ 1146 (1249)
T 3sfz_A         1074 TGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLAT-------GD 1146 (1249)
T ss_dssp             TTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEE-------EE
T ss_pred             CCceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcceeeeeccCCCcEEEEEECCCCCEEEE-------Ee
Confidence            99999999999999999999999999999999999999999998876 45678899999999999987744       33


Q ss_pred             cceeeEEEEeeccc
Q psy14511        473 EKQQHAIAYTVFGE  486 (488)
Q Consensus       473 ~~~~~~i~~~~~g~  486 (488)
                      .+..+.+|...+|+
T Consensus      1147 ~dg~i~vwd~~~~~ 1160 (1249)
T 3sfz_A         1147 DNGEIRIWNVSDGQ 1160 (1249)
T ss_dssp             TTSCCCEEESSSSC
T ss_pred             CCCEEEEEECCCCc
Confidence            45555556555554

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6e-47  Score=380.31  Aligned_cols=404  Identities=12%  Similarity=0.106  Sum_probs=285.2

Q ss_pred             ccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccc
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHL   80 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~   80 (488)
                      +.||++||+|+.||+|+|||..+.+..  ....|...|.+++|+| |++|++++ |++|+|||+.+++.   +..+. |.
T Consensus        26 spdg~~lAsgs~Dg~I~lw~~~~~~~~--~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~---~~~~~-~~   98 (902)
T 2oaj_A           26 DFTQNLLAIATVTGEVHIYGQQQVEVV--IKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKV---LTTVF-VP   98 (902)
T ss_dssp             ETTTTEEEEEETTSEEEEECSTTCEEE--EECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSE---EEEEE-CS
T ss_pred             CCCCCEEEEEeCCCEEEEEeCCCcEEE--EEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcE---EEEEc-CC
Confidence            348999999999999999998776532  2235788999999999 88999998 99999999987543   33333 66


Q ss_pred             cceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceec
Q psy14511         81 SAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLN  160 (488)
Q Consensus        81 ~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (488)
                      +.|++++|+|+++++++++.   ||+|++||+.+++.. .+.......  ....+                         
T Consensus        99 ~~V~~v~~sp~g~~l~sgs~---dg~V~lwd~~~~~~~-~~~i~~~~~--~~~~~-------------------------  147 (902)
T 2oaj_A           99 GKITSIDTDASLDWMLIGLQ---NGSMIVYDIDRDQLS-SFKLDNLQK--SSFFP-------------------------  147 (902)
T ss_dssp             SCEEEEECCTTCSEEEEEET---TSCEEEEETTTTEEE-EEEECCHHH--HHTCS-------------------------
T ss_pred             CCEEEEEECCCCCEEEEEcC---CCcEEEEECCCCccc-cceeccccc--ccccc-------------------------
Confidence            89999999999998877776   999999999887642 111000000  00000                         


Q ss_pred             cccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCC---CcEEEEECCCeEEEEECCCCceEEEEecC
Q psy14511        161 QSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGY---HDTLAVALDTSVYTWNTKTNKTQLLVEYP  237 (488)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~v~iw~~~~~~~~~~~~~~  237 (488)
                                                        ......+.++.|++   +.+++++.|+.| +||+++++....+...
T Consensus       148 ----------------------------------~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~  192 (902)
T 2oaj_A          148 ----------------------------------AARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYE  192 (902)
T ss_dssp             ----------------------------------SSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCC
T ss_pred             ----------------------------------ccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecc
Confidence                                              00011233455554   357777799999 9999999877766532


Q ss_pred             ---------------CCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeee--e---cc-------------cc
Q psy14511        238 ---------------TYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQK--L---RT-------------HM  284 (488)
Q Consensus       238 ---------------~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~--~---~~-------------~~  284 (488)
                                     ..|...|.+++|+|+|++|+++ +.|+.|++||+++++++..  +   ..             |.
T Consensus       193 ~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasg-s~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~  271 (902)
T 2oaj_A          193 LPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITI-HEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNA  271 (902)
T ss_dssp             BCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEE-ETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCC
T ss_pred             cCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEE-ECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCcccc
Confidence                           1134779999999999999999 9999999999988876543  2   11             23


Q ss_pred             ccEEEEEe----c---CCEEEEeec-------------------------------------------------------
Q psy14511        285 HQVIAMCW----N---GNLLSCGTI-------------------------------------------------------  302 (488)
Q Consensus       285 ~~v~~~~~----~---~~~l~~~~~-------------------------------------------------------  302 (488)
                      ..|.+++|    +   +.++++|+.                                                       
T Consensus       272 ~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  351 (902)
T 2oaj_A          272 AKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPI  351 (902)
T ss_dssp             CEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEEC
T ss_pred             CCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEEC
Confidence            46777777    1   134555533                                                       


Q ss_pred             ---------------------CCeEEEEECcCCCccce------eeecCCccEE--------------------------
Q psy14511        303 ---------------------GGNILHYDVRTHSDYPT------AITREGDVVC--------------------------  329 (488)
Q Consensus       303 ---------------------dg~i~i~d~~~~~~~~~------~~~~~~~~i~--------------------------  329 (488)
                                           ||.|++||+.++.....      .+..|...|+                          
T Consensus       352 ~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l  431 (902)
T 2oaj_A          352 PRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLL  431 (902)
T ss_dssp             CSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSC
T ss_pred             CCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcc
Confidence                                 34444555433211000      0111223344                          


Q ss_pred             --------EEEEccCCcEEEEEe-cCeEEEEECCCCCCCcc--c--------------ceeeeeecCCCCEEEEEccCCC
Q psy14511        330 --------GLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRP--L--------------GLIVPKLKREGRELVTSHGKQD  384 (488)
Q Consensus       330 --------~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~--~--------------~~~~~~~~~~~~~l~~~~g~~~  384 (488)
                              .++|+|++++|++++ |++|++||+.++.....  +              .....+|+|++++|++  |+.|
T Consensus       432 ~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAs--gs~D  509 (902)
T 2oaj_A          432 KGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAV--SIET  509 (902)
T ss_dssp             CCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEE--EETT
T ss_pred             cCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEE--EecC
Confidence                    345578999999999 79999999988753211  1              1112299999999999  7899


Q ss_pred             CeEEEEeCCCc---------------------------------------------ceeEEEeeccccEEEEEEcCCCCE
Q psy14511        385 CSLKMWEYPRL---------------------------------------------HLIEELKIHQERILSAVLSPDQTC  419 (488)
Q Consensus       385 ~~i~i~d~~~~---------------------------------------------~~~~~~~~~~~~v~~~~~s~~~~~  419 (488)
                      ++|++||+.++                                             +++..+.+|.+.|++++||||| +
T Consensus       510 gtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~  588 (902)
T 2oaj_A          510 GDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-F  588 (902)
T ss_dssp             SCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-E
T ss_pred             cEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-E
Confidence            99999999765                                             2467888999999999999999 9


Q ss_pred             EEEEeCCCcEEEEecCCCCcc------ccc-cccCCcceEEee-----cCCCceEEEEeeecccccceeeEEEEe---ec
Q psy14511        420 VAAASADETISIWNCFPRDKK------RKA-RQVGSGSSLEFA-----ILKQPVSLTALLRSRAVEKQQHAIAYT---VF  484 (488)
Q Consensus       420 l~t~~~dg~v~iw~~~~~~~~------~~~-~~~~~v~~~~~s-----~~~~~~~~~~~~~~~~~~~~~~~i~~~---~~  484 (488)
                      ||+|+.|++|++||+.++...      ... +|...|.+++|+     |||.    .....+.++.+..+.+|..   ++
T Consensus       589 lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~----~~~~l~sgs~D~tv~~wd~~p~~~  664 (902)
T 2oaj_A          589 VGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGY----SSILMVCGTDMGEVITYKILPASG  664 (902)
T ss_dssp             EEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSS----EEEEEEEEETTSEEEEEEEEECGG
T ss_pred             EEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCC----cceEEEEEecCCcEEEEEEecCCC
Confidence            999999999999999887653      222 688889999999     8862    1122245566777777766   55


Q ss_pred             cc
Q psy14511        485 GE  486 (488)
Q Consensus       485 g~  486 (488)
                      |+
T Consensus       665 g~  666 (902)
T 2oaj_A          665 GK  666 (902)
T ss_dssp             GC
T ss_pred             Cc
Confidence            54

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=100.00  E-value=1.5e-46  Score=367.62  Aligned_cols=388  Identities=15%  Similarity=0.167  Sum_probs=298.2

Q ss_pred             ccCCceEEEeecCCeEEEEEcccC----cccceeecccCce-EEEEEEcc--CCcEEEEec-CCeEEEEeccccC-----
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTH----SDYPTAITREGDV-VCGLKWSP--NGRYLASGS-NNTVKIWDFRQLD-----   68 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~----~~~~~~~~~h~~~-V~~l~~sp--~g~~las~~-d~~i~vwd~~~~~-----   68 (488)
                      +.||++||+++ ++.|+|||+.++    + ....+.+|... |++++|+|  ++++||+++ |+.|++||+.+++     
T Consensus        27 spdg~~l~~~~-~~~v~v~~~~~~~~~~~-~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~  104 (615)
T 1pgu_A           27 DPTTNAIAYPC-GKSAFVRCLDDGDSKVP-PVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSV  104 (615)
T ss_dssp             ETTTTEEEEEE-TTEEEEEECCSSCCSSC-SEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEE
T ss_pred             CCCCCEEEEec-CCeEEEEECCCCCCccc-cceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccc
Confidence            34899999988 889999999987    5 44678899999 99999999  999999998 9999999997541     


Q ss_pred             cCCCcccccccccceeEEEEecCCCeEEeeeCCccc----ceEEEEecCCCeeeeeeecCCCccccccccccccccceeE
Q psy14511         69 AKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICD----QTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHL  144 (488)
Q Consensus        69 ~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (488)
                      .......+..|..+|.+++|+|+++++++++.   +    +.|++||  .++....+..+...+.               
T Consensus       105 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---~~~~~~~v~~~d--~~~~~~~~~~~~~~v~---------------  164 (615)
T 1pgu_A          105 EVNVKSEFQVLAGPISDISWDFEGRRLCVVGE---GRDNFGVFISWD--SGNSLGEVSGHSQRIN---------------  164 (615)
T ss_dssp             EEEEEEEEECCSSCEEEEEECTTSSEEEEEEC---CSSCSEEEEETT--TCCEEEECCSCSSCEE---------------
T ss_pred             cccccchhhcccccEEEEEEeCCCCEEEEecc---CCCCccEEEEEE--CCCcceeeecCCccEE---------------
Confidence            12344556779999999999999998888876   5    6888887  5555555544433222               


Q ss_pred             EEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCC---cEEEEECCCeEE
Q psy14511        145 SFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYH---DTLAVALDTSVY  221 (488)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~v~  221 (488)
                                                                                .+.|+++   .+++++.|+.|+
T Consensus       165 ----------------------------------------------------------~~~~~~~~~~~l~~~~~d~~v~  186 (615)
T 1pgu_A          165 ----------------------------------------------------------ACHLKQSRPMRSMTVGDDGSVV  186 (615)
T ss_dssp             ----------------------------------------------------------EEEECSSSSCEEEEEETTTEEE
T ss_pred             ----------------------------------------------------------EEEECCCCCcEEEEEeCCCcEE
Confidence                                                                      2333332   578888999999


Q ss_pred             EEECCCCceEEEEecCCCCCC---ceEEEEEcCC-CCeEEEEeCCCCcEEEEECCcceeeeee-c---cccccEEEEEe-
Q psy14511        222 TWNTKTNKTQLLVEYPTYDNA---YISCVAWKPR-TTDLAVTNTCTEYIDLWHEQEERLIQKL-R---THMHQVIAMCW-  292 (488)
Q Consensus       222 iw~~~~~~~~~~~~~~~~~~~---~i~~~~~~~~-~~~l~~~~~~~~~i~i~d~~~~~~~~~~-~---~~~~~v~~~~~-  292 (488)
                      +||+.+++....+..   |..   .|.+++|+|+ +++++++ +.|+.|++||+.+++.+..+ .   .|...|.+++| 
T Consensus       187 vwd~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~  262 (615)
T 1pgu_A          187 FYQGPPFKFSASDRT---HHKQGSFVRDVEFSPDSGEFVITV-GSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL  262 (615)
T ss_dssp             EEETTTBEEEEEECS---SSCTTCCEEEEEECSTTCCEEEEE-ETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES
T ss_pred             EEeCCCcceeeeecc---cCCCCceEEEEEECCCCCCEEEEE-eCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc
Confidence            999999887766554   667   8999999999 9999999 89999999999999999988 6   89999999999 


Q ss_pred             cCCEEEEeecCCeEEEEECcCCCcc--------------------------------------------ceeeecCCcc-
Q psy14511        293 NGNLLSCGTIGGNILHYDVRTHSDY--------------------------------------------PTAITREGDV-  327 (488)
Q Consensus       293 ~~~~l~~~~~dg~i~i~d~~~~~~~--------------------------------------------~~~~~~~~~~-  327 (488)
                      +++++++++.|+.|++||+++++..                                            ...+..|... 
T Consensus       263 ~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v  342 (615)
T 1pgu_A          263 DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGI  342 (615)
T ss_dssp             SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCE
T ss_pred             CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCE
Confidence            8999999999999999998764210                                            1112223333 


Q ss_pred             --------------------------------EEEEEEccCCcEEEEEe-cCeEEEEEC---------------------
Q psy14511        328 --------------------------------VCGLKWSPNGRYLASGS-NNTVKIWDF---------------------  353 (488)
Q Consensus       328 --------------------------------i~~~~~s~~~~~l~~~~-d~~i~iwd~---------------------  353 (488)
                                                      |.+++| +++..|++++ |+.+++||+                     
T Consensus       343 ~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~-~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~  421 (615)
T 1pgu_A          343 TALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDN-SKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTA  421 (615)
T ss_dssp             EEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEEC-CSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEE
T ss_pred             EEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEE-CCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEE
Confidence                                            333333 2233444444 344444443                     


Q ss_pred             -----------------------------------------------------CCCCCC-cccce-----eeeeecCCCC
Q psy14511        354 -----------------------------------------------------RQLDAK-RPLGL-----IVPKLKREGR  374 (488)
Q Consensus       354 -----------------------------------------------------~~~~~~-~~~~~-----~~~~~~~~~~  374 (488)
                                                                           .+.+.. ..+..     ...+|+|+++
T Consensus       422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~  501 (615)
T 1pgu_A          422 VLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSET  501 (615)
T ss_dssp             EEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSS
T ss_pred             EEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCC
Confidence                                                                 322110 00100     0128999999


Q ss_pred             EEEEEccCCCCeEEEEeCCCcceeEEEee-ccccEEEEEEcC----------CCCEEEEEeCCCcEEEEecCCC-Ccc-c
Q psy14511        375 ELVTSHGKQDCSLKMWEYPRLHLIEELKI-HQERILSAVLSP----------DQTCVAAASADETISIWNCFPR-DKK-R  441 (488)
Q Consensus       375 ~l~~~~g~~~~~i~i~d~~~~~~~~~~~~-~~~~v~~~~~s~----------~~~~l~t~~~dg~v~iw~~~~~-~~~-~  441 (488)
                      ++++  ++.|+.|++||+.+++.+..+.+ |...|++++|+|          ++++||+++.||.|++||+.++ +.. .
T Consensus       502 ~l~~--~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~  579 (615)
T 1pgu_A          502 YIAA--GDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKA  579 (615)
T ss_dssp             EEEE--EETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEE
T ss_pred             EEEE--cCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechh
Confidence            9999  78899999999999999999888 999999999999          9999999999999999999987 444 4


Q ss_pred             cccccCCcceEEeecCCCceEEEEeeecccccceeeEEEEeec
Q psy14511        442 KARQVGSGSSLEFAILKQPVSLTALLRSRAVEKQQHAIAYTVF  484 (488)
Q Consensus       442 ~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  484 (488)
                      ...|...|.+++|+|+++ +       ..+..+..+.+|..+.
T Consensus       580 ~~~h~~~v~~l~~s~~~~-l-------~s~~~d~~v~iw~~~~  614 (615)
T 1pgu_A          580 LNAHKDGVNNLLWETPST-L-------VSSGADACIKRWNVVL  614 (615)
T ss_dssp             TTSSTTCEEEEEEEETTE-E-------EEEETTSCEEEEEEC-
T ss_pred             hhcCccceEEEEEcCCCC-e-------EEecCCceEEEEeeec
Confidence            577899999999999998 5       3355777788887654

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=100.00  E-value=3.2e-46  Score=393.29  Aligned_cols=417  Identities=16%  Similarity=0.225  Sum_probs=315.1

Q ss_pred             ccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEcc--CCcEEEEec-CCeEEEEeccccCcCCCcccccc
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSP--NGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQC   78 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp--~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~   78 (488)
                      +.||++||+|+.||.|+|||+.+++.+ ..+.+|...|.+++|+|  ++.++++++ |+.|++||+.+++   .+..+.+
T Consensus       666 s~~~~~l~s~~~d~~v~vwd~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~---~~~~~~~  741 (1249)
T 3sfz_A          666 SSDDSYIATCSADKKVKIWDSATGKLV-HTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE---CRNTMFG  741 (1249)
T ss_dssp             CTTSSEEEEEETTSEEEEEETTTCCEE-EEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSS---EEEEECC
T ss_pred             ecCCCEEEEEeCCCeEEEEECCCCceE-EEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcc---hhheecC
Confidence            458999999999999999999998854 66889999999999999  556888988 9999999998754   4455778


Q ss_pred             cccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCC-------------ccccccccccccccceeEE
Q psy14511         79 HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQ-------------QANDETISYREQKKRRHLS  145 (488)
Q Consensus        79 h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~  145 (488)
                      |.+.|.+++|+|+++.+++++.   |++|++||+.+++....+.....             .+..+.+++++.    .+.
T Consensus       742 h~~~v~~~~~sp~~~~l~s~s~---dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~----~l~  814 (1249)
T 3sfz_A          742 HTNSVNHCRFSPDDELLASCSA---DGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGD----KII  814 (1249)
T ss_dssp             CSSCEEEEEECSSTTEEEEEES---SSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSS----EEE
T ss_pred             CCCCEEEEEEecCCCEEEEEEC---CCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCC----EEE
Confidence            9999999999999998887776   99999999999887766653321             122233333221    111


Q ss_pred             EEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC--CCcEEEEECCCeEEEE
Q psy14511        146 FLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG--YHDTLAVALDTSVYTW  223 (488)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~v~iw  223 (488)
                      ....    ....++......                       ............+..+.++  +..+++++.++.|++|
T Consensus       815 ~~~~----~~v~~~d~~~~~-----------------------~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vw  867 (1249)
T 3sfz_A          815 VAAK----NKVLLFDIHTSG-----------------------LLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELW  867 (1249)
T ss_dssp             EEET----TEEEEEETTTCC-----------------------EEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEE
T ss_pred             EEcC----CcEEEEEecCCC-----------------------ceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEE
Confidence            1100    001111111000                       0000000111223334444  4567777799999999


Q ss_pred             ECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECC-------------------------------
Q psy14511        224 NTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQ-------------------------------  272 (488)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~-------------------------------  272 (488)
                      ++.++.....+.  + |...|.+++|+|+++.++++ +.|+.|++|++.                               
T Consensus       868 d~~~~~~~~~~~--~-h~~~v~~v~~spdg~~l~s~-s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  943 (1249)
T 3sfz_A          868 NIDSRLKVADCR--G-HLSWVHGVMFSPDGSSFLTA-SDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNI  943 (1249)
T ss_dssp             ETTTTEEEEEEC--C-CSSCEEEEEECTTSSEEEEE-ETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESS
T ss_pred             EcCCCceeeecC--C-CccceEEEEECCCCCEEEEE-eCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCC
Confidence            999987765554  3 88889999999998888888 788888888743                               


Q ss_pred             ------------------------------------------------cceeeeeeccccccEEEEEe--cCCEEEEeec
Q psy14511        273 ------------------------------------------------EERLIQKLRTHMHQVIAMCW--NGNLLSCGTI  302 (488)
Q Consensus       273 ------------------------------------------------~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~  302 (488)
                                                                      +++....+.+|...|.+++|  +++++++++.
T Consensus       944 ~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~ 1023 (1249)
T 3sfz_A          944 RGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSE 1023 (1249)
T ss_dssp             SSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECS
T ss_pred             cceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcC
Confidence                                                            22233344568888888998  7899999999


Q ss_pred             CCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCccccee-----eeeecCCCCEEE
Q psy14511        303 GGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLI-----VPKLKREGRELV  377 (488)
Q Consensus       303 dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~-----~~~~~~~~~~l~  377 (488)
                      ||.|++||+.++.  ......|...|.+++|+|++.+++.+.|+.+++||+.+++....+...     ..+|+|++++++
T Consensus      1024 dg~i~vwd~~~~~--~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~ 1101 (1249)
T 3sfz_A         1024 DSVIQVWNWQTGD--YVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFS 1101 (1249)
T ss_dssp             SSBEEEEETTTTE--EECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCE
T ss_pred             CCEEEEEECCCCc--eEEEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEE
Confidence            9999999998864  334568889999999999887665555899999999988655444322     228999999999


Q ss_pred             EEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcccc----------ccccC
Q psy14511        378 TSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRK----------ARQVG  447 (488)
Q Consensus       378 ~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~----------~~~~~  447 (488)
                      +  ++.|+.|++||+.+++++..+.+|...|++++|+||+++|++++.||.|++||+.+++....          ..|.+
T Consensus      1102 s--~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 1179 (1249)
T 3sfz_A         1102 S--TSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGG 1179 (1249)
T ss_dssp             E--ECCSSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSCCCCCCCCCC-------CCS
T ss_pred             E--EcCCCcEEEEECCCcceeeeeccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEeccccccccccccCc
Confidence            9  78899999999999999999999999999999999999999999999999999999887643          46888


Q ss_pred             CcceEEeecCCCceEEE
Q psy14511        448 SGSSLEFAILKQPVSLT  464 (488)
Q Consensus       448 ~v~~~~~s~~~~~~~~~  464 (488)
                      .+.+++|+|+++.+...
T Consensus      1180 ~v~~l~fs~dg~~l~s~ 1196 (1249)
T 3sfz_A         1180 WVTDVCFSPDSKTLVSA 1196 (1249)
T ss_dssp             CCCEEEECTTSSCEEEE
T ss_pred             eEEEEEECCCCCEEEEC
Confidence            99999999999988543

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=2.6e-45  Score=326.87  Aligned_cols=288  Identities=19%  Similarity=0.327  Sum_probs=239.8

Q ss_pred             eeecccCceEEEEEEccC----CcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCccc
Q psy14511         30 TAITREGDVVCGLKWSPN----GRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICD  104 (488)
Q Consensus        30 ~~~~~h~~~V~~l~~sp~----g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d  104 (488)
                      ..+.+|.+.|.+++|+|+    +++|++|+ |++|+|||+.+.+ ......+.+|...|.+++|+++++.+++++.   |
T Consensus        26 ~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~-~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~---D  101 (321)
T 3ow8_A           26 KQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDER-LDLQWSLEGHQLGVVSVDISHTLPIAASSSL---D  101 (321)
T ss_dssp             EETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTE-EEEEEEECCCSSCEEEEEECSSSSEEEEEET---T
T ss_pred             eecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCC-eeeeeeeccCCCCEEEEEECCCCCEEEEEeC---C
Confidence            445789999999999985    67999998 9999999997643 2233457899999999999999987777666   9


Q ss_pred             ceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccC
Q psy14511        105 QTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKA  184 (488)
Q Consensus       105 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (488)
                      ++|++||+.+++.+..+..+...+..+.+++                                                 
T Consensus       102 ~~i~lWd~~~~~~~~~~~~~~~~~~~~~~sp-------------------------------------------------  132 (321)
T 3ow8_A          102 AHIRLWDLENGKQIKSIDAGPVDAWTLAFSP-------------------------------------------------  132 (321)
T ss_dssp             SEEEEEETTTTEEEEEEECCTTCCCCEEECT-------------------------------------------------
T ss_pred             CcEEEEECCCCCEEEEEeCCCccEEEEEECC-------------------------------------------------
Confidence            9999999999988777765533332222222                                                 


Q ss_pred             CCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCC
Q psy14511        185 KPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTE  264 (488)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~  264 (488)
                                            ++..+++++.++.|++|++.+++....+..   +...+.+++|+|++++|+++ +.|+
T Consensus       133 ----------------------dg~~l~~g~~dg~v~i~~~~~~~~~~~~~~---~~~~v~~~~~spdg~~lasg-~~dg  186 (321)
T 3ow8_A          133 ----------------------DSQYLATGTHVGKVNIFGVESGKKEYSLDT---RGKFILSIAYSPDGKYLASG-AIDG  186 (321)
T ss_dssp             ----------------------TSSEEEEECTTSEEEEEETTTCSEEEEEEC---SSSCEEEEEECTTSSEEEEE-ETTS
T ss_pred             ----------------------CCCEEEEEcCCCcEEEEEcCCCceeEEecC---CCceEEEEEECCCCCEEEEE-cCCC
Confidence                                  224577778999999999999887665554   77789999999999999999 9999


Q ss_pred             cEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEE
Q psy14511        265 YIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLAS  342 (488)
Q Consensus       265 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~  342 (488)
                      .|++||+++++.+..+.+|..+|.+++|  ++++|++++.|+.|++||++.. .....+.+|...|.+++|+|++++|++
T Consensus       187 ~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~-~~~~~~~~h~~~v~~~~~sp~~~~l~s  265 (321)
T 3ow8_A          187 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA-NLAGTLSGHASWVLNVAFCPDDTHFVS  265 (321)
T ss_dssp             CEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTC-CEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred             eEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCc-ceeEEEcCCCCceEEEEECCCCCEEEE
Confidence            9999999999999999999999999999  6899999999999999999875 466788899999999999999999998


Q ss_pred             EecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEE
Q psy14511        343 GSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAA  422 (488)
Q Consensus       343 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t  422 (488)
                      ++                                      .|++|++||+.+++++.++.+|...|++++|+|++++|++
T Consensus       266 ~s--------------------------------------~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s  307 (321)
T 3ow8_A          266 SS--------------------------------------SDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVS  307 (321)
T ss_dssp             EE--------------------------------------TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred             Ee--------------------------------------CCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEE
Confidence            86                                      2444455555556778888899999999999999999999


Q ss_pred             EeCCCcEEEEecC
Q psy14511        423 ASADETISIWNCF  435 (488)
Q Consensus       423 ~~~dg~v~iw~~~  435 (488)
                      ++.||.|++||+.
T Consensus       308 ~~~d~~i~vwd~p  320 (321)
T 3ow8_A          308 VGDDQEIHIYDCP  320 (321)
T ss_dssp             EETTCCEEEEECC
T ss_pred             EeCCCeEEEEeCC
Confidence            9999999999963

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=2.5e-45  Score=338.83  Aligned_cols=285  Identities=19%  Similarity=0.345  Sum_probs=242.7

Q ss_pred             eeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEE
Q psy14511         30 TAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVR  108 (488)
Q Consensus        30 ~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~  108 (488)
                      ..+.+|.++|++++|+|++++|++|+ |+.|+|||+.+++   ....+.+|.+.|.+++|+|+++++++++.   |++|+
T Consensus       102 ~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~---~~~~l~~h~~~V~~v~~~~~~~~l~sgs~---D~~i~  175 (410)
T 1vyh_C          102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD---FERTLKGHTDSVQDISFDHSGKLLASCSA---DMTIK  175 (410)
T ss_dssp             CEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCC---CCEEECCCSSCEEEEEECTTSSEEEEEET---TSCCC
T ss_pred             EeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc---EEEEEeccCCcEEEEEEcCCCCEEEEEeC---CCeEE
Confidence            45789999999999999999999998 9999999998754   44567889999999999999988777776   99999


Q ss_pred             EEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCce
Q psy14511        109 LWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPER  188 (488)
Q Consensus       109 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (488)
                      +||+.+++++..+..+...+..+.+.+                                                     
T Consensus       176 iwd~~~~~~~~~~~~h~~~V~~v~~~p-----------------------------------------------------  202 (410)
T 1vyh_C          176 LWDFQGFECIRTMHGHDHNVSSVSIMP-----------------------------------------------------  202 (410)
T ss_dssp             EEETTSSCEEECCCCCSSCEEEEEECS-----------------------------------------------------
T ss_pred             EEeCCCCceeEEEcCCCCCEEEEEEeC-----------------------------------------------------
Confidence            999998887777666544332222221                                                     


Q ss_pred             eecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEE
Q psy14511        189 ILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDL  268 (488)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i  268 (488)
                                        .++.+++++.|+.|++||+.++.....+..   |...+.+++++|++++++++ +.|+.|++
T Consensus       203 ------------------~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~---h~~~v~~~~~~~~g~~l~s~-s~D~~v~v  260 (410)
T 1vyh_C          203 ------------------NGDHIVSASRDKTIKMWEVQTGYCVKTFTG---HREWVRMVRPNQDGTLIASC-SNDQTVRV  260 (410)
T ss_dssp             ------------------SSSEEEEEETTSEEEEEETTTCCEEEEEEC---CSSCEEEEEECTTSSEEEEE-ETTSCEEE
T ss_pred             ------------------CCCEEEEEeCCCeEEEEECCCCcEEEEEeC---CCccEEEEEECCCCCEEEEE-cCCCeEEE
Confidence                              235688889999999999999987766654   88899999999999999999 99999999


Q ss_pred             EECCcceeeeeeccccccEEEEEec----------------------CCEEEEeecCCeEEEEECcCCCccceeeecCCc
Q psy14511        269 WHEQEERLIQKLRTHMHQVIAMCWN----------------------GNLLSCGTIGGNILHYDVRTHSDYPTAITREGD  326 (488)
Q Consensus       269 ~d~~~~~~~~~~~~~~~~v~~~~~~----------------------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~  326 (488)
                      ||+.++++...+.+|...|.+++|.                      +.++++|+.|+.|++||++++ .+...+.+|..
T Consensus       261 wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~-~~~~~~~~h~~  339 (410)
T 1vyh_C          261 WVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG-MCLMTLVGHDN  339 (410)
T ss_dssp             EETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTT-EEEEEEECCSS
T ss_pred             EECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCC-ceEEEEECCCC
Confidence            9999999999999999999999993                      568999999999999999986 46778889999


Q ss_pred             cEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeecc
Q psy14511        327 VVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQ  405 (488)
Q Consensus       327 ~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~  405 (488)
                      .|.+++|+|++++|++++ |+.|++||+                                       .+++++..+.+|.
T Consensus       340 ~v~~v~~~~~g~~l~s~s~D~~i~vwd~---------------------------------------~~~~~~~~~~~h~  380 (410)
T 1vyh_C          340 WVRGVLFHSGGKFILSCADDKTLRVWDY---------------------------------------KNKRCMKTLNAHE  380 (410)
T ss_dssp             CEEEEEECSSSSCEEEEETTTEEEEECC---------------------------------------TTSCCCEEEECCS
T ss_pred             cEEEEEEcCCCCEEEEEeCCCeEEEEEC---------------------------------------CCCceEEEEcCCC
Confidence            999999999999999886 355555554                                       4456677888999


Q ss_pred             ccEEEEEEcCCCCEEEEEeCCCcEEEEecC
Q psy14511        406 ERILSAVLSPDQTCVAAASADETISIWNCF  435 (488)
Q Consensus       406 ~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~  435 (488)
                      ..|++++|+|++++|++|+.||.|++|++.
T Consensus       381 ~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r  410 (410)
T 1vyh_C          381 HFVTSLDFHKTAPYVVTGSVDQTVKVWECR  410 (410)
T ss_dssp             SCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred             CcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence            999999999999999999999999999863

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=3.3e-45  Score=329.74  Aligned_cols=282  Identities=20%  Similarity=0.336  Sum_probs=242.6

Q ss_pred             ceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceE
Q psy14511         29 PTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTV  107 (488)
Q Consensus        29 ~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i  107 (488)
                      ...+.+|.+.|.+++|+|++++|++++ |+.|++||+.+++   .+..+..|...|.+++|+|+++++++++.   |+.+
T Consensus        48 ~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~---~~~~~~~~~~~v~~~~~s~~~~~l~s~~~---d~~v  121 (340)
T 1got_B           48 RRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTN---KVHAIPLRSSWVMTCAYAPSGNYVACGGL---DNIC  121 (340)
T ss_dssp             EEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCC---EEEEEECSSSCEEEEEECTTSSEEEEEET---TCEE
T ss_pred             heeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCC---cceEeecCCccEEEEEECCCCCEEEEEeC---CCeE
Confidence            356889999999999999999999998 9999999998744   44456779999999999999998877776   9999


Q ss_pred             EEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCc
Q psy14511        108 RLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPE  187 (488)
Q Consensus       108 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (488)
                      ++|++.++....                                                                    
T Consensus       122 ~iw~~~~~~~~~--------------------------------------------------------------------  133 (340)
T 1got_B          122 SIYNLKTREGNV--------------------------------------------------------------------  133 (340)
T ss_dssp             EEEETTTCSBSC--------------------------------------------------------------------
T ss_pred             EEEECccCCCcc--------------------------------------------------------------------
Confidence            999987543100                                                                    


Q ss_pred             eeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEE
Q psy14511        188 RILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYID  267 (488)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~  267 (488)
                                                                 .....+.+ |...+.++.|++++. ++++ +.|+.|+
T Consensus       134 -------------------------------------------~~~~~~~~-h~~~v~~~~~~~~~~-l~s~-s~d~~i~  167 (340)
T 1got_B          134 -------------------------------------------RVSRELAG-HTGYLSCCRFLDDNQ-IVTS-SGDTTCA  167 (340)
T ss_dssp             -------------------------------------------EEEEEEEC-CSSCEEEEEEEETTE-EEEE-ETTSCEE
T ss_pred             -------------------------------------------eeEEEecC-CCccEEEEEECCCCc-EEEE-ECCCcEE
Confidence                                                       00111222 788999999998874 7777 8999999


Q ss_pred             EEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-
Q psy14511        268 LWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-  344 (488)
Q Consensus       268 i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-  344 (488)
                      +||+++++.+..+.+|...|.+++|  +++++++|+.|+.|++||++++ .....+.+|...|.+++|+|++++|++++ 
T Consensus       168 ~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~-~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~  246 (340)
T 1got_B          168 LWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREG-MCRQTFTGHESDINAICFFPNGNAFATGSD  246 (340)
T ss_dssp             EEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC-SEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred             EEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCC-eeEEEEcCCcCCEEEEEEcCCCCEEEEEcC
Confidence            9999999999999999999999999  6889999999999999999886 46778889999999999999999999999 


Q ss_pred             cCeEEEEECCCCCCCcccc-------eeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCC
Q psy14511        345 NNTVKIWDFRQLDAKRPLG-------LIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQ  417 (488)
Q Consensus       345 d~~i~iwd~~~~~~~~~~~-------~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~  417 (488)
                      |+.|++||+++.+....+.       ....+|+|+++++++  |+.|+.|++||+.+++.+..+.+|.++|.+++|+|++
T Consensus       247 d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~--g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg  324 (340)
T 1got_B          247 DATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLA--GYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDG  324 (340)
T ss_dssp             TSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEE--EETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS
T ss_pred             CCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEE--ECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCC
Confidence            6999999998765332221       112289999999999  7899999999999999999999999999999999999


Q ss_pred             CEEEEEeCCCcEEEEe
Q psy14511        418 TCVAAASADETISIWN  433 (488)
Q Consensus       418 ~~l~t~~~dg~v~iw~  433 (488)
                      ++||+|+.||.|++||
T Consensus       325 ~~l~s~s~D~~i~iWd  340 (340)
T 1got_B          325 MAVATGSWDSFLKIWN  340 (340)
T ss_dssp             SCEEEEETTSCEEEEC
T ss_pred             CEEEEEcCCccEEecC
Confidence            9999999999999997

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=100.00  E-value=2.8e-46  Score=341.95  Aligned_cols=305  Identities=18%  Similarity=0.314  Sum_probs=251.6

Q ss_pred             eEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCe
Q psy14511         16 NILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPT   94 (488)
Q Consensus        16 ~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~   94 (488)
                      .+..|+..... ....+.+|.+.|++++|+|++++|++|+ |++|+|||+.+++   ....+..|...|.+++|+|++++
T Consensus        47 ~~~~~~~~~~~-~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~---~~~~~~~h~~~v~~~~~s~~g~~  122 (380)
T 3iz6_a           47 TAVSFNPTDLV-CCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQ---KTHAIKLHCPWVMECAFAPNGQS  122 (380)
T ss_dssp             GCCCCCCCCCE-EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTE---EEEEEECCCTTCCCCEECTTSSE
T ss_pred             cccccccceeE-EeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc---cceEEecCCCCEEEEEECCCCCE
Confidence            44456665544 3467899999999999999999999999 9999999998744   34456789999999999999988


Q ss_pred             EEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecc
Q psy14511         95 LLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRT  174 (488)
Q Consensus        95 l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (488)
                      +++++.   |+.+++|++.+......   .                                                  
T Consensus       123 las~~~---d~~v~iw~~~~~~~~~~---~--------------------------------------------------  146 (380)
T 3iz6_a          123 VACGGL---DSACSIFNLSSQADRDG---N--------------------------------------------------  146 (380)
T ss_dssp             EEECCS---SSCCEEEECCCCSSCCC---S--------------------------------------------------
T ss_pred             EEEeeC---CCcEEEEECCCCccccC---C--------------------------------------------------
Confidence            777776   99999999865431000   0                                                  


Q ss_pred             cccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCC-
Q psy14511        175 LGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRT-  253 (488)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-  253 (488)
                                                                             ......+.+ |...+.++.|.|++ 
T Consensus       147 -------------------------------------------------------~~~~~~~~g-h~~~v~~~~~~~~~~  170 (380)
T 3iz6_a          147 -------------------------------------------------------MPVSRVLTG-HKGYASSCQYVPDQE  170 (380)
T ss_dssp             -------------------------------------------------------STTCCBCCC-CSSCCCCCBCCSSSS
T ss_pred             -------------------------------------------------------ccceeeccC-CCcceEEEEEecCCC
Confidence                                                                   000001122 78889999999975 


Q ss_pred             CeEEEEeCCCCcEEEEECCcceeeeee-----ccccccEEEEEe---cCCEEEEeecCCeEEEEECcCCCccceeeecCC
Q psy14511        254 TDLAVTNTCTEYIDLWHEQEERLIQKL-----RTHMHQVIAMCW---NGNLLSCGTIGGNILHYDVRTHSDYPTAITREG  325 (488)
Q Consensus       254 ~~l~~~~~~~~~i~i~d~~~~~~~~~~-----~~~~~~v~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~  325 (488)
                      ..++++ +.|++|++||+.+++.+..+     .+|...+.++++   +++++++|+.|+.|++||++........+.+|.
T Consensus       171 ~~l~s~-s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~  249 (380)
T 3iz6_a          171 TRLITG-SGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHE  249 (380)
T ss_dssp             SCEEEE-CTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCS
T ss_pred             CEEEEE-CCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcC
Confidence            457777 99999999999999888776     578999999998   578999999999999999986667788899999


Q ss_pred             ccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccce------------eeeeecCCCCEEEEEccCCCCeEEEEeC
Q psy14511        326 DVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGL------------IVPKLKREGRELVTSHGKQDCSLKMWEY  392 (488)
Q Consensus       326 ~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~------------~~~~~~~~~~~l~~~~g~~~~~i~i~d~  392 (488)
                      ..|.+++|+|++++|++++ |+.|++||++++.....+..            ...+|+|+|+++++  |+.||.|++||+
T Consensus       250 ~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~--g~~dg~i~vwd~  327 (380)
T 3iz6_a          250 GDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFA--GYSNGDCYVWDT  327 (380)
T ss_dssp             SCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEE--ECTTSCEEEEET
T ss_pred             CCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEE--EECCCCEEEEEC
Confidence            9999999999999999999 69999999998754322211            12389999999999  889999999999


Q ss_pred             CCcceeEEE----eeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCc
Q psy14511        393 PRLHLIEEL----KIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDK  439 (488)
Q Consensus       393 ~~~~~~~~~----~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~  439 (488)
                      .+++.+..+    .+|.+.|++++|+||+++|++|+.||.|++|++...+.
T Consensus       328 ~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~~  378 (380)
T 3iz6_a          328 LLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHRK  378 (380)
T ss_dssp             TTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSSS
T ss_pred             CCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCcc
Confidence            999888877    68999999999999999999999999999999987653

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=100.00  E-value=6.3e-45  Score=329.22  Aligned_cols=285  Identities=20%  Similarity=0.347  Sum_probs=242.2

Q ss_pred             ceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceE
Q psy14511         29 PTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTV  107 (488)
Q Consensus        29 ~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i  107 (488)
                      ...+.+|.+.|++++|+|++++||+|+ |++|+|||..+++   ....+..|...|.+++|+|++..+++.+.   |+.+
T Consensus        57 ~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~---~~~~~~~~~~~v~~~~~sp~g~~lasg~~---d~~i  130 (354)
T 2pbi_B           57 RRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTN---KEHAVTMPCTWVMACAYAPSGCAIACGGL---DNKC  130 (354)
T ss_dssp             EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC---EEEEEECSSSCCCEEEECTTSSEEEEEST---TSEE
T ss_pred             EEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCC---cceEEecCCCCEEEEEECCCCCEEEEeeC---CCCE
Confidence            356789999999999999999999999 9999999987744   33345668889999999999988777766   9999


Q ss_pred             EEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCc
Q psy14511        108 RLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPE  187 (488)
Q Consensus       108 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (488)
                      ++|++........                                                                   
T Consensus       131 ~v~~~~~~~~~~~-------------------------------------------------------------------  143 (354)
T 2pbi_B          131 SVYPLTFDKNENM-------------------------------------------------------------------  143 (354)
T ss_dssp             EEEECCCCTTCCS-------------------------------------------------------------------
T ss_pred             EEEEEeccccccc-------------------------------------------------------------------
Confidence            9999864321000                                                                   


Q ss_pred             eeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEE
Q psy14511        188 RILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYID  267 (488)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~  267 (488)
                                                              ......+.  + |...|.+++|+|++..++++ +.|++|+
T Consensus       144 ----------------------------------------~~~~~~~~--~-h~~~v~~~~~~~~~~~l~t~-s~D~~v~  179 (354)
T 2pbi_B          144 ----------------------------------------AAKKKSVA--M-HTNYLSACSFTNSDMQILTA-SGDGTCA  179 (354)
T ss_dssp             ----------------------------------------GGGCEEEE--E-CSSCEEEEEECSSSSEEEEE-ETTSEEE
T ss_pred             ----------------------------------------cccceeee--c-cCCcEEEEEEeCCCCEEEEE-eCCCcEE
Confidence                                                    00001111  1 88899999999999999999 9999999


Q ss_pred             EEECCcceeeeeeccccccEEEEEe----cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEE
Q psy14511        268 LWHEQEERLIQKLRTHMHQVIAMCW----NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASG  343 (488)
Q Consensus       268 i~d~~~~~~~~~~~~~~~~v~~~~~----~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~  343 (488)
                      +||+++++.+..+.+|...+.++++    +++.+++|+.||.|++||++++ .+...+..|...|.+++|+|++++|+++
T Consensus       180 lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~-~~~~~~~~h~~~v~~v~~~p~~~~l~s~  258 (354)
T 2pbi_B          180 LWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSG-QCVQAFETHESDVNSVRYYPSGDAFASG  258 (354)
T ss_dssp             EEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTC-CEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred             EEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCC-cEEEEecCCCCCeEEEEEeCCCCEEEEE
Confidence            9999999999999999999999988    3689999999999999999986 4677788999999999999999999999


Q ss_pred             e-cCeEEEEECCCCCCCcccc-------eeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcC
Q psy14511        344 S-NNTVKIWDFRQLDAKRPLG-------LIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSP  415 (488)
Q Consensus       344 ~-d~~i~iwd~~~~~~~~~~~-------~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~  415 (488)
                      + |+.|++||++.......+.       ....+|+|+++++++  |+.|+.|++||+.+++.+..+.+|.+.|++++|+|
T Consensus       259 s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~--g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~sp  336 (354)
T 2pbi_B          259 SDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFA--GYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSP  336 (354)
T ss_dssp             ETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEE--EETTSCEEEEETTTCSEEEEECCCSSCEEEEEECT
T ss_pred             eCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEE--EECCCcEEEEECCCCceEEEEECCCCcEEEEEECC
Confidence            9 6999999998764322211       112389999999999  78999999999999999999999999999999999


Q ss_pred             CCCEEEEEeCCCcEEEEe
Q psy14511        416 DQTCVAAASADETISIWN  433 (488)
Q Consensus       416 ~~~~l~t~~~dg~v~iw~  433 (488)
                      |+++|++|+.||.|++|+
T Consensus       337 dg~~l~sgs~D~~v~vW~  354 (354)
T 2pbi_B          337 DGTAFCSGSWDHTLRVWA  354 (354)
T ss_dssp             TSSCEEEEETTSEEEEEC
T ss_pred             CCCEEEEEcCCCCEEecC
Confidence            999999999999999996

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=100.00  E-value=1.3e-44  Score=327.48  Aligned_cols=306  Identities=11%  Similarity=0.180  Sum_probs=224.2

Q ss_pred             EEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-------CCeEEEEeccccCcCCC-ccccccc
Q psy14511          8 LSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-------NNTVKIWDFRQLDAKRP-QVNNQCH   79 (488)
Q Consensus         8 la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-------d~~i~vwd~~~~~~~~~-~~~~~~h   79 (488)
                      ++.++.+.....|++....     ...|...|++++|||||++||+++       |+.|++|+..++..... .....+|
T Consensus        19 ~~~~~g~~~~~~w~~p~~~-----p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~   93 (357)
T 4g56_B           19 YFQSNGSSKGSAWGRPVTA-----PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQT   93 (357)
T ss_dssp             --------------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEEC
T ss_pred             EEecCCCccccccCCCCCC-----cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCC
Confidence            3444456778888875433     347999999999999999999997       56799999876543332 2234568


Q ss_pred             ccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeecccccee
Q psy14511         80 LSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVL  159 (488)
Q Consensus        80 ~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (488)
                      ...|.+++|+|+++ +++++.   |++|++||+.+++......                                     
T Consensus        94 ~~~V~~~~~s~d~~-~l~~s~---dg~v~lWd~~~~~~~~~~~-------------------------------------  132 (357)
T 4g56_B           94 EAGVTDVAWVSEKG-ILVASD---SGAVELWEILEKESLLVNK-------------------------------------  132 (357)
T ss_dssp             SSCEEEEEEETTTE-EEEEET---TSCEEEC--------CCCC-------------------------------------
T ss_pred             CCCEEEEEEcCCCC-EEEEEC---CCEEEEeeccccceeEEEe-------------------------------------
Confidence            89999999999985 566665   9999999998765321110                                     


Q ss_pred             ccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCC
Q psy14511        160 NQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTY  239 (488)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~  239 (488)
                                                                                                ....+ 
T Consensus       133 --------------------------------------------------------------------------~~~~~-  137 (357)
T 4g56_B          133 --------------------------------------------------------------------------FAKYE-  137 (357)
T ss_dssp             --------------------------------------------------------------------------EEECC-
T ss_pred             --------------------------------------------------------------------------eccCC-
Confidence                                                                                      01112 


Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cC-CEEEEeecCCeEEEEECcCCCc
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NG-NLLSCGTIGGNILHYDVRTHSD  316 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~-~~l~~~~~dg~i~i~d~~~~~~  316 (488)
                      |...|++++|+|++++|+++ +.|+.|++||+++++.+..+.+|...|.+++|  ++ .++++++.||.|++||+++++.
T Consensus       138 h~~~V~~v~~spdg~~l~sg-s~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~  216 (357)
T 4g56_B          138 HDDIVKTLSVFSDGTQAVSG-GKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKP  216 (357)
T ss_dssp             CSSCEEEEEECSSSSEEEEE-ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSC
T ss_pred             CCCCEEEEEECCCCCEEEEE-eCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCce
Confidence            88899999999999999999 99999999999999999999999999999999  34 5889999999999999988653


Q ss_pred             cc-eeeecCCccEEEEEEccCC-cEEEEEe-cCeEEEEECCCCCCCccccee-----eeeecCCCC-EEEEEccCCCCeE
Q psy14511        317 YP-TAITREGDVVCGLKWSPNG-RYLASGS-NNTVKIWDFRQLDAKRPLGLI-----VPKLKREGR-ELVTSHGKQDCSL  387 (488)
Q Consensus       317 ~~-~~~~~~~~~i~~~~~s~~~-~~l~~~~-d~~i~iwd~~~~~~~~~~~~~-----~~~~~~~~~-~l~~~~g~~~~~i  387 (488)
                      .. .....+...+.+++|+|++ .+|++++ |+.|++||+++.+....+...     ..+|+|++. +|++  |+.|++|
T Consensus       217 ~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~las--gs~D~~i  294 (357)
T 4g56_B          217 ATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLAS--ISEDCTV  294 (357)
T ss_dssp             BCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEE--EETTSCE
T ss_pred             eeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEE--EeCCCEE
Confidence            32 2344567789999999975 6888888 699999999988655444322     128999985 5666  7899999


Q ss_pred             EEEeCCCcceeEEEeeccccEEEEEEcC-CCCEEEEEeCCCcEEEEecCCCC
Q psy14511        388 KMWEYPRLHLIEELKIHQERILSAVLSP-DQTCVAAASADETISIWNCFPRD  438 (488)
Q Consensus       388 ~i~d~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~t~~~dg~v~iw~~~~~~  438 (488)
                      +|||+++++++..+ +|.+.|++++|+| |+++|++++.||.|++|++.+..
T Consensus       295 ~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~  345 (357)
T 4g56_B          295 AVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEG  345 (357)
T ss_dssp             EEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC---
T ss_pred             EEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCC
Confidence            99999999887655 7999999999999 89999999999999999997643

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=1.5e-43  Score=313.55  Aligned_cols=283  Identities=17%  Similarity=0.308  Sum_probs=238.7

Q ss_pred             cceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccce
Q psy14511         28 YPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQT  106 (488)
Q Consensus        28 ~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~  106 (488)
                      +...+.+|.+.|.+++|+|++++|++++ |+.|++||+.++.   .+..+..|..+|.+++|+|+++++++++.   |++
T Consensus         5 ~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~s~s~---d~~   78 (304)
T 2ynn_A            5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQV---EVRSIQVTETPVRAGKFIARKNWIIVGSD---DFR   78 (304)
T ss_dssp             CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE---EEEEEECCSSCEEEEEEEGGGTEEEEEET---TSE
T ss_pred             eEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCc---eeEEeeccCCcEEEEEEeCCCCEEEEECC---CCE
Confidence            3467889999999999999999999998 9999999998744   44556789999999999999988877776   999


Q ss_pred             EEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCC
Q psy14511        107 VRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKP  186 (488)
Q Consensus       107 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (488)
                      |++||+.+++.+..+.                                                                
T Consensus        79 i~vwd~~~~~~~~~~~----------------------------------------------------------------   94 (304)
T 2ynn_A           79 IRVFNYNTGEKVVDFE----------------------------------------------------------------   94 (304)
T ss_dssp             EEEEETTTCCEEEEEE----------------------------------------------------------------
T ss_pred             EEEEECCCCcEEEEEe----------------------------------------------------------------
Confidence            9999998776432221                                                                


Q ss_pred             ceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcE
Q psy14511        187 ERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYI  266 (488)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i  266 (488)
                                                                         + |...|.+++|+|++++++++ +.|++|
T Consensus        95 ---------------------------------------------------~-h~~~v~~~~~~~~~~~l~sg-s~D~~v  121 (304)
T 2ynn_A           95 ---------------------------------------------------A-HPDYIRSIAVHPTKPYVLSG-SDDLTV  121 (304)
T ss_dssp             ---------------------------------------------------C-CSSCEEEEEECSSSSEEEEE-ETTSCE
T ss_pred             ---------------------------------------------------C-CCCcEEEEEEcCCCCEEEEE-CCCCeE
Confidence                                                               2 77889999999999999999 999999


Q ss_pred             EEEECCcc-eeeeeeccccccEEEEEe---cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEcc--CCcEE
Q psy14511        267 DLWHEQEE-RLIQKLRTHMHQVIAMCW---NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSP--NGRYL  340 (488)
Q Consensus       267 ~i~d~~~~-~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~--~~~~l  340 (488)
                      ++||++++ .....+.+|...|.+++|   ++..+++|+.|+.|++||++...........|...+..+.|+|  ++++|
T Consensus       122 ~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l  201 (304)
T 2ynn_A          122 KLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYM  201 (304)
T ss_dssp             EEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEE
T ss_pred             EEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEE
Confidence            99999886 556778899999999999   3579999999999999999876555555566778899999987  77899


Q ss_pred             EEEe-cCeEEEEECCCCCCCccccee-----eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEc
Q psy14511        341 ASGS-NNTVKIWDFRQLDAKRPLGLI-----VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLS  414 (488)
Q Consensus       341 ~~~~-d~~i~iwd~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s  414 (488)
                      ++++ |+.|++||+++++....+...     ..+|+|+++.+++  |+.|++|++||+.+++++.++..|...+++++|+
T Consensus       202 ~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s--~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~  279 (304)
T 2ynn_A          202 ITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIIS--GSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATH  279 (304)
T ss_dssp             EEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEE--EETTSCEEEEETTTCCEEEEECCSSSSEEEEEEC
T ss_pred             EEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEE--EcCCCeEEEEECCCCceeeeccCCCccEEEEEEC
Confidence            9999 699999999987654444322     2289999999999  7899999999999999999999999999999999


Q ss_pred             CCCC--EEEEEeCCCcEEEEecCC
Q psy14511        415 PDQT--CVAAASADETISIWNCFP  436 (488)
Q Consensus       415 ~~~~--~l~t~~~dg~v~iw~~~~  436 (488)
                      |++.  ++|+|+.|| +.+|++..
T Consensus       280 ~~~~~~~~asg~~~g-~~~~~~~~  302 (304)
T 2ynn_A          280 PTGRKNYIASGFDNG-FTVLSLGN  302 (304)
T ss_dssp             TTCGGGCEEEEETTE-EEEEECC-
T ss_pred             CCCCceEEEEecCCc-eEEEEecc
Confidence            9875  577777665 77888765

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=100.00  E-value=5.2e-43  Score=312.15  Aligned_cols=283  Identities=23%  Similarity=0.475  Sum_probs=241.8

Q ss_pred             cceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccce
Q psy14511         28 YPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQT  106 (488)
Q Consensus        28 ~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~  106 (488)
                      +...+.+|.+.|++++|+|++++|++++ |+.|++|++.+++   ....+.+|...|.+++|+|+++++++++.   |+.
T Consensus        15 ~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~---~~~~~~~h~~~v~~~~~~~~~~~l~s~~~---d~~   88 (312)
T 4ery_A           15 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK---FEKTISGHKLGISDVAWSSDSNLLVSASD---DKT   88 (312)
T ss_dssp             EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC---EEEEECCCSSCEEEEEECTTSSEEEEEET---TSE
T ss_pred             eEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcc---cchhhccCCCceEEEEEcCCCCEEEEECC---CCE
Confidence            4456789999999999999999999998 9999999998744   34456789999999999999988877776   999


Q ss_pred             EEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCC
Q psy14511        107 VRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKP  186 (488)
Q Consensus       107 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (488)
                      |++||+.+++.+..+.                                                                
T Consensus        89 i~vwd~~~~~~~~~~~----------------------------------------------------------------  104 (312)
T 4ery_A           89 LKIWDVSSGKCLKTLK----------------------------------------------------------------  104 (312)
T ss_dssp             EEEEETTTCCEEEEEE----------------------------------------------------------------
T ss_pred             EEEEECCCCcEEEEEc----------------------------------------------------------------
Confidence            9999998765432211                                                                


Q ss_pred             ceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcE
Q psy14511        187 ERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYI  266 (488)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i  266 (488)
                                                                         + |...|.+++|+|++++++++ +.|+.|
T Consensus       105 ---------------------------------------------------~-~~~~v~~~~~~~~~~~l~s~-~~d~~i  131 (312)
T 4ery_A          105 ---------------------------------------------------G-HSNYVFCCNFNPQSNLIVSG-SFDESV  131 (312)
T ss_dssp             ---------------------------------------------------C-CSSCEEEEEECSSSSEEEEE-ETTSCE
T ss_pred             ---------------------------------------------------C-CCCCEEEEEEcCCCCEEEEE-eCCCcE
Confidence                                                               1 67789999999999999999 999999


Q ss_pred             EEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe
Q psy14511        267 DLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS  344 (488)
Q Consensus       267 ~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~  344 (488)
                      ++||+++++.+..+..|..++.+++|  +++++++++.||.|++||+++++........+..++..++|+|++++|++++
T Consensus       132 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  211 (312)
T 4ery_A          132 RIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT  211 (312)
T ss_dssp             EEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEE
T ss_pred             EEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEc
Confidence            99999999999999999999999999  6899999999999999999987544444556777899999999999999999


Q ss_pred             -cCeEEEEECCCCCCCccccee-------eeee-cCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcC
Q psy14511        345 -NNTVKIWDFRQLDAKRPLGLI-------VPKL-KREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSP  415 (488)
Q Consensus       345 -d~~i~iwd~~~~~~~~~~~~~-------~~~~-~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~  415 (488)
                       |+.|++||+++.+....+...       ...+ .++++++++  |+.|+.|++||+.+++.+..+.+|...|.+++|+|
T Consensus       212 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s--g~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p  289 (312)
T 4ery_A          212 LDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS--GSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHP  289 (312)
T ss_dssp             TTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEE--CCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECS
T ss_pred             CCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEE--ECCCCEEEEEECCCchhhhhhhccCCcEEEEeecC
Confidence             699999999987543332211       1133 367888888  89999999999999999999999999999999999


Q ss_pred             CCCEEEEEe--CCCcEEEEecC
Q psy14511        416 DQTCVAAAS--ADETISIWNCF  435 (488)
Q Consensus       416 ~~~~l~t~~--~dg~v~iw~~~  435 (488)
                      ++++|++++  .|+.|++|+.+
T Consensus       290 ~~~~l~s~~~~~d~~i~~W~~d  311 (312)
T 4ery_A          290 TENIIASAALENDKTIKLWKSD  311 (312)
T ss_dssp             SSSEEEEEECTTTCCEEEEECC
T ss_pred             cCCceEEEEccCCccEEEecCC
Confidence            999999997  69999999864

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=100.00  E-value=8.1e-44  Score=321.16  Aligned_cols=293  Identities=19%  Similarity=0.323  Sum_probs=232.9

Q ss_pred             ceeecccCc-eEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccce
Q psy14511         29 PTAITREGD-VVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQT  106 (488)
Q Consensus        29 ~~~~~~h~~-~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~  106 (488)
                      ...+.+|.+ .|.+++|+|+|++||+|+ |+.|+|||+.++..........+|...|.+++|+|++++|++++.   |++
T Consensus         8 ~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~---D~~   84 (345)
T 3fm0_A            8 LGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASF---DAT   84 (345)
T ss_dssp             EEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEET---TSC
T ss_pred             eeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEEC---CCc
Confidence            356778987 999999999999999998 999999999865322222234689999999999999998877776   999


Q ss_pred             EEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCC
Q psy14511        107 VRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKP  186 (488)
Q Consensus       107 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (488)
                      +++|++..+...                                                                    
T Consensus        85 v~iw~~~~~~~~--------------------------------------------------------------------   96 (345)
T 3fm0_A           85 TCIWKKNQDDFE--------------------------------------------------------------------   96 (345)
T ss_dssp             EEEEEECCC-EE--------------------------------------------------------------------
T ss_pred             EEEEEccCCCeE--------------------------------------------------------------------
Confidence            999998654310                                                                    


Q ss_pred             ceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcE
Q psy14511        187 ERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYI  266 (488)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i  266 (488)
                                                                   ....+.+ |...|.+++|+|++++|+++ +.|+.|
T Consensus        97 ---------------------------------------------~~~~~~~-h~~~v~~v~~sp~~~~l~s~-s~D~~v  129 (345)
T 3fm0_A           97 ---------------------------------------------CVTTLEG-HENEVKSVAWAPSGNLLATC-SRDKSV  129 (345)
T ss_dssp             ---------------------------------------------EEEEECC-CSSCEEEEEECTTSSEEEEE-ETTSCE
T ss_pred             ---------------------------------------------EEEEccC-CCCCceEEEEeCCCCEEEEE-ECCCeE
Confidence                                                         1112223 88899999999999999999 999999


Q ss_pred             EEEECCcc---eeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCC-ccceeeecCCccEEEEEEccCCcEE
Q psy14511        267 DLWHEQEE---RLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHS-DYPTAITREGDVVCGLKWSPNGRYL  340 (488)
Q Consensus       267 ~i~d~~~~---~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l  340 (488)
                      ++||+..+   ..+..+..|...|.+++|  ++++|++++.|+.|++||.+... .....+.+|...|.+++|+|++++|
T Consensus       130 ~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l  209 (345)
T 3fm0_A          130 WVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRL  209 (345)
T ss_dssp             EEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred             EEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEE
Confidence            99999765   456677889999999999  68999999999999999998753 2446788999999999999999999


Q ss_pred             EEEe-cCeEEEEECCCCCCCccc---------------------ceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcc--
Q psy14511        341 ASGS-NNTVKIWDFRQLDAKRPL---------------------GLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLH--  396 (488)
Q Consensus       341 ~~~~-d~~i~iwd~~~~~~~~~~---------------------~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~--  396 (488)
                      ++++ |+.|++||.........+                     .....+|+|++..+++  ++.|+.|++|+.....  
T Consensus       210 ~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s--~~~d~~i~vw~~~~~~~~  287 (345)
T 3fm0_A          210 ASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALAT--ACGDDAIRVFQEDPNSDP  287 (345)
T ss_dssp             EEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEE--EETTSCEEEEEECTTSCT
T ss_pred             EEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEE--EeCCCeEEEEEeCCCCCc
Confidence            9999 699999997433221110                     0112289999999999  6789999999986542  


Q ss_pred             --e-----eEEEeeccccEEEEEEcCCC-CEEEEEeCCCcEEEEecCCCCccc
Q psy14511        397 --L-----IEELKIHQERILSAVLSPDQ-TCVAAASADETISIWNCFPRDKKR  441 (488)
Q Consensus       397 --~-----~~~~~~~~~~v~~~~~s~~~-~~l~t~~~dg~v~iw~~~~~~~~~  441 (488)
                        +     .....+|...|++++|+|++ .+||+|+.||.|++|++.++++..
T Consensus       288 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~  340 (345)
T 3fm0_A          288 QQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLH  340 (345)
T ss_dssp             TSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC-----
T ss_pred             ceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCcc
Confidence              1     12235789999999999998 499999999999999999887653

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.8e-43  Score=352.77  Aligned_cols=388  Identities=11%  Similarity=0.086  Sum_probs=264.5

Q ss_pred             CceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCC-Cc-------cc
Q psy14511          5 GNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKR-PQ-------VN   75 (488)
Q Consensus         5 g~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~-~~-------~~   75 (488)
                      |++||+++.|++|+|||+.+++.+. .+. |.+.|++++|+|++++|++|+ |+.|++||+++++... .+       ..
T Consensus        69 g~~L~S~s~D~~v~lWd~~~~~~~~-~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~  146 (902)
T 2oaj_A           69 GIYLVVINAKDTVYVLSLYSQKVLT-TVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFF  146 (902)
T ss_dssp             TTEEEEEETTCEEEEEETTTCSEEE-EEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTC
T ss_pred             CCEEEEEECcCeEEEEECCCCcEEE-EEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccc
Confidence            6789999999999999999887553 343 668899999999999999998 9999999998754310 00       23


Q ss_pred             ccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccc
Q psy14511         76 NQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDR  155 (488)
Q Consensus        76 ~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (488)
                      +.+|.++|.+++|+|++..+++++..  |+.| +||+.+++....+..+..+...     ..                 .
T Consensus       147 ~~~h~~~V~sl~~sp~~~~~l~~g~~--dg~v-lWd~~~~~~~~~~~~~~~~g~~-----~~-----------------~  201 (902)
T 2oaj_A          147 PAARLSPIVSIQWNPRDIGTVLISYE--YVTL-TYSLVENEIKQSFIYELPPFAP-----GG-----------------D  201 (902)
T ss_dssp             SSSCCCCCCEEEEETTEEEEEEEECS--SCEE-EEETTTTEEEEEECCCBCTTCC-----CS-----------------T
T ss_pred             cccCCCCeEEEEEccCCCCEEEEEeC--CCcE-EEECCCCceEEEEecccCCcCC-----Cc-----------------c
Confidence            57799999999999975445555553  9999 9999999877666543110000     00                 0


Q ss_pred             cceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCC--CcEEEEECCCeEEEEECCCCceEEE
Q psy14511        156 KKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGY--HDTLAVALDTSVYTWNTKTNKTQLL  233 (488)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~v~iw~~~~~~~~~~  233 (488)
                                                    ..  . .........+.++.|++  ..+++++.|+.|++||+.+++....
T Consensus       202 ------------------------------~~--~-~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~  248 (902)
T 2oaj_A          202 ------------------------------FS--E-KTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMA  248 (902)
T ss_dssp             ------------------------------TC--C-CTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEE
T ss_pred             ------------------------------cc--c-ccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEE
Confidence                                          00  0 00000112345566654  4577888999999999999887654


Q ss_pred             EecC---C------------CCCCceEEEEEc----CCCCeEEEEeCC--------------------------------
Q psy14511        234 VEYP---T------------YDNAYISCVAWK----PRTTDLAVTNTC--------------------------------  262 (488)
Q Consensus       234 ~~~~---~------------~~~~~i~~~~~~----~~~~~l~~~~~~--------------------------------  262 (488)
                      ..+.   .            .+...|++++|+    |++..++++++.                                
T Consensus       249 r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~  328 (902)
T 2oaj_A          249 RTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYY  328 (902)
T ss_dssp             ECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHH
T ss_pred             EeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhh
Confidence            2221   1            024478888884    443233332222                                


Q ss_pred             --------------------------------------------CCcEEEEECCcceeeee-------eccccccEEEEE
Q psy14511        263 --------------------------------------------TEYIDLWHEQEERLIQK-------LRTHMHQVIAMC  291 (488)
Q Consensus       263 --------------------------------------------~~~i~i~d~~~~~~~~~-------~~~~~~~v~~~~  291 (488)
                                                                  |+.|++||+.++.....       +..|...|++++
T Consensus       329 ~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~  408 (902)
T 2oaj_A          329 ANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSM  408 (902)
T ss_dssp             HSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEE
T ss_pred             cCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEE
Confidence                                                        23344444433321111       122334444433


Q ss_pred             e------------------------------------cCCEEEEeecCCeEEEEECcCCCccc-eee---------ecCC
Q psy14511        292 W------------------------------------NGNLLSCGTIGGNILHYDVRTHSDYP-TAI---------TREG  325 (488)
Q Consensus       292 ~------------------------------------~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~---------~~~~  325 (488)
                      +                                    +++.|++|+.|++|++||+..+.... ..+         .+|.
T Consensus       409 ~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~  488 (902)
T 2oaj_A          409 AASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKE  488 (902)
T ss_dssp             EEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSS
T ss_pred             EEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCC
Confidence            3                                    46799999999999999998763110 111         1788


Q ss_pred             ccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCC------------------------------------------ccc
Q psy14511        326 DVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAK------------------------------------------RPL  362 (488)
Q Consensus       326 ~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~------------------------------------------~~~  362 (488)
                      ..|.+++|+|++++||+++ |++|++||+.+.+..                                          +.+
T Consensus       489 ~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  568 (902)
T 2oaj_A          489 LAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPS  568 (902)
T ss_dssp             CCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEE
T ss_pred             CceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCcccee
Confidence            8999999999999999999 699999999765210                                          001


Q ss_pred             cee--------eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeE-----EEe-eccccEEEEEEc-----CCC---CEE
Q psy14511        363 GLI--------VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIE-----ELK-IHQERILSAVLS-----PDQ---TCV  420 (488)
Q Consensus       363 ~~~--------~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~-----~~~-~~~~~v~~~~~s-----~~~---~~l  420 (488)
                      ..+        ..+|+||| +|++  |+.|++|++||+++...+.     .+. +|.+.|++++|+     |||   ++|
T Consensus       569 ~~l~~h~~~V~svafSpdG-~lAs--gs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l  645 (902)
T 2oaj_A          569 TAVHANKGKTSAINNSNIG-FVGI--AYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILM  645 (902)
T ss_dssp             EEECCCSCSEEEEEECBTS-EEEE--EETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEE
T ss_pred             EEEEcCCCcEEEEEecCCc-EEEE--EeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEE
Confidence            111        11899999 8888  8899999999998877654     232 888999999999     885   899


Q ss_pred             EEEeCCCcEEEEec---CCCCcc-ccccc-----cCCcceEE-ee
Q psy14511        421 AAASADETISIWNC---FPRDKK-RKARQ-----VGSGSSLE-FA  455 (488)
Q Consensus       421 ~t~~~dg~v~iw~~---~~~~~~-~~~~~-----~~~v~~~~-~s  455 (488)
                      ++|+.|++|++||+   .+++.. .+.+|     .++|.++. |+
T Consensus       646 ~sgs~D~tv~~wd~~p~~~g~~~~~~~~~~~~~~~~~v~~i~~~~  690 (902)
T 2oaj_A          646 VCGTDMGEVITYKILPASGGKFDVQLMDITNVTSKGPIHKIDAFS  690 (902)
T ss_dssp             EEEETTSEEEEEEEEECGGGCEEEEEEEEEECCSSCCCCEEEEEE
T ss_pred             EEEecCCcEEEEEEecCCCCcEEEEecCceecCCCCceEEEEeEe
Confidence            99999999999999   666644 22223     46676666 66

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=100.00  E-value=4.1e-43  Score=354.37  Aligned_cols=358  Identities=16%  Similarity=0.210  Sum_probs=292.2

Q ss_pred             ccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccc
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHL   80 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~   80 (488)
                      +.||++||+|+.||.|+|||+.+++.+ ..+.+|..+|.+++|+|++++|++++ |+.|++||+.+++   .+..+.+|.
T Consensus        22 sp~~~~la~~~~~g~v~iwd~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~---~~~~~~~~~   97 (814)
T 3mkq_A           22 HPTEPWVLTTLYSGRVEIWNYETQVEV-RSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGE---KVVDFEAHP   97 (814)
T ss_dssp             CSSSSEEEEEETTSEEEEEETTTTEEE-EEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCC---EEEEEECCS
T ss_pred             CCCCCEEEEEeCCCEEEEEECCCCceE-EEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc---EEEEEecCC
Confidence            348999999999999999999988744 66789999999999999999999998 9999999998754   445567899


Q ss_pred             cceeEEEEecCCCeEEeeeCCcccceEEEEecCCC-eeeeeeecCCCccccccccccccccceeEEEEEeeeecccccee
Q psy14511         81 SAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNG-KEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVL  159 (488)
Q Consensus        81 ~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (488)
                      +.|++++|+|+++++++++.   |+.|++||+.++ .....+..+...+..                             
T Consensus        98 ~~v~~~~~s~~~~~l~~~~~---dg~i~vw~~~~~~~~~~~~~~~~~~v~~-----------------------------  145 (814)
T 3mkq_A           98 DYIRSIAVHPTKPYVLSGSD---DLTVKLWNWENNWALEQTFEGHEHFVMC-----------------------------  145 (814)
T ss_dssp             SCEEEEEECSSSSEEEEEET---TSEEEEEEGGGTSEEEEEEECCSSCEEE-----------------------------
T ss_pred             CCEEEEEEeCCCCEEEEEcC---CCEEEEEECCCCceEEEEEcCCCCcEEE-----------------------------
Confidence            99999999999998887776   999999999876 444444444332222                             


Q ss_pred             ccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCC---CcEEEEECCCeEEEEECCCCceEEEEec
Q psy14511        160 NQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGY---HDTLAVALDTSVYTWNTKTNKTQLLVEY  236 (488)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~v~iw~~~~~~~~~~~~~  236 (488)
                                                                  +.|++   ..+++++.|+.|++||+.++........
T Consensus       146 --------------------------------------------~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~  181 (814)
T 3mkq_A          146 --------------------------------------------VAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTT  181 (814)
T ss_dssp             --------------------------------------------EEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEEC
T ss_pred             --------------------------------------------EEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEec
Confidence                                                        33332   3577788999999999988876655543


Q ss_pred             CCCCCCceEEEEEcC--CCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECc
Q psy14511        237 PTYDNAYISCVAWKP--RTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVR  312 (488)
Q Consensus       237 ~~~~~~~i~~~~~~~--~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~  312 (488)
                      .  +...+.+++|+|  ++++++++ +.+|.|++||+.+++.+..+.+|...+.+++|  +++++++++.||.|++||+.
T Consensus       182 ~--~~~~v~~~~~~~~~~~~~l~~~-~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~  258 (814)
T 3mkq_A          182 G--QERGVNYVDYYPLPDKPYMITA-SDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSS  258 (814)
T ss_dssp             C--CTTCCCEEEECCSTTCCEEEEE-CTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETT
T ss_pred             C--CCCCEEEEEEEECCCCCEEEEE-eCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence            2  557899999999  99999999 99999999999999999999999999999999  68899999999999999998


Q ss_pred             CCCccceeeecCCccEEEEEEccCCc--EEEEEecCeEEEEECCCCCCCcccc---------------------------
Q psy14511        313 THSDYPTAITREGDVVCGLKWSPNGR--YLASGSNNTVKIWDFRQLDAKRPLG---------------------------  363 (488)
Q Consensus       313 ~~~~~~~~~~~~~~~i~~~~~s~~~~--~l~~~~d~~i~iwd~~~~~~~~~~~---------------------------  363 (488)
                      ++ .....+..|...+.+++|+|+++  +++++.++.+.+|++........+.                           
T Consensus       259 ~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  337 (814)
T 3mkq_A          259 TY-KVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNE  337 (814)
T ss_dssp             TC-SEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCC
T ss_pred             CC-cEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeeccccc
Confidence            85 46777888889999999999997  6777778889999976432111000                           


Q ss_pred             ---------------------eeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEE
Q psy14511        364 ---------------------LIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAA  422 (488)
Q Consensus       364 ---------------------~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t  422 (488)
                                           ....+|+|+|++++++  + ++.+.+|++......     +.+.+.+++|+||+++||+
T Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~--~-~~~~~i~~~~~~~~~-----~~~~i~~~~~spdg~~la~  409 (814)
T 3mkq_A          338 EVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVV--G-DGEYVIYTALAWRNK-----AFGKCQDFVWGPDSNSYAL  409 (814)
T ss_dssp             CCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEE--E-TTEEEEEETTTTEEE-----EEEECSEEEECTTSSCEEE
T ss_pred             ccccCccceeeeecCCCCccCCceeEECCCCCEEEEe--c-CCEEEEEECcccccc-----CCCceEEEEEeCCCCeEEE
Confidence                                 0112899999999984  4 899999998654332     3567889999999999999


Q ss_pred             EeCCCcEEEEecCCCCccccccccCCcceEEeecCC
Q psy14511        423 ASADETISIWNCFPRDKKRKARQVGSGSSLEFAILK  458 (488)
Q Consensus       423 ~~~dg~v~iw~~~~~~~~~~~~~~~~v~~~~~s~~~  458 (488)
                      ++.||.|++|+.       ...+...+.++.|+|++
T Consensus       410 ~~~~g~v~l~~~-------~~~~~~~v~~~~~s~dg  438 (814)
T 3mkq_A          410 IDETGQIKYYKN-------FKEVTSWSVPMHSAIDR  438 (814)
T ss_dssp             ECTTCCEEEEET-------TEECTTCCCCCSSCCCE
T ss_pred             EeCCCcEEEEEC-------CCCccceEEcCCcCccc
Confidence            999999999963       23456778889999987

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=100.00  E-value=4.6e-43  Score=312.56  Aligned_cols=284  Identities=16%  Similarity=0.228  Sum_probs=237.7

Q ss_pred             ceeecccCceEEEEEEccCC-cEEEEec-CCeEEEEeccccCc--CCCcccccccccceeEEEEecCCCeEEeeeCCccc
Q psy14511         29 PTAITREGDVVCGLKWSPNG-RYLASGS-NNTVKIWDFRQLDA--KRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICD  104 (488)
Q Consensus        29 ~~~~~~h~~~V~~l~~sp~g-~~las~~-d~~i~vwd~~~~~~--~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d  104 (488)
                      ...+.+|.+.|++++|+|++ ++|++|+ |++|++|++.+...  ..++..+.+|...|.+++|+|+++++++++.   |
T Consensus        10 ~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~---D   86 (319)
T 3frx_A           10 RGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASW---D   86 (319)
T ss_dssp             EEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEET---T
T ss_pred             EEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeC---C
Confidence            45688999999999999965 8999998 99999999975332  2245567899999999999999998888776   9


Q ss_pred             ceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccC
Q psy14511        105 QTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKA  184 (488)
Q Consensus       105 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (488)
                      ++|++||+.+++....+.                                                              
T Consensus        87 ~~v~~wd~~~~~~~~~~~--------------------------------------------------------------  104 (319)
T 3frx_A           87 KTLRLWDVATGETYQRFV--------------------------------------------------------------  104 (319)
T ss_dssp             SEEEEEETTTTEEEEEEE--------------------------------------------------------------
T ss_pred             CEEEEEECCCCCeeEEEc--------------------------------------------------------------
Confidence            999999998876432221                                                              


Q ss_pred             CCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCC
Q psy14511        185 KPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTE  264 (488)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~  264 (488)
                                                                           + |...|.+++|+|++.+++++ +.|+
T Consensus       105 -----------------------------------------------------~-h~~~v~~~~~~~~~~~l~s~-s~D~  129 (319)
T 3frx_A          105 -----------------------------------------------------G-HKSDVMSVDIDKKASMIISG-SRDK  129 (319)
T ss_dssp             -----------------------------------------------------C-CSSCEEEEEECTTSCEEEEE-ETTS
T ss_pred             -----------------------------------------------------c-CCCcEEEEEEcCCCCEEEEE-eCCC
Confidence                                                                 2 77889999999999999999 9999


Q ss_pred             cEEEEECCcceeeeeeccccccEEEEEec--------CCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccC
Q psy14511        265 YIDLWHEQEERLIQKLRTHMHQVIAMCWN--------GNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPN  336 (488)
Q Consensus       265 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~  336 (488)
                      .|++||++. +++..+.+|...+.++.+.        +..+++++.|+.|++||+++. .....+.+|...|.+++|+|+
T Consensus       130 ~i~vwd~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~h~~~v~~~~~sp~  207 (319)
T 3frx_A          130 TIKVWTIKG-QCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQF-QIEADFIGHNSNINTLTASPD  207 (319)
T ss_dssp             CEEEEETTS-CEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTT-EEEEEECCCCSCEEEEEECTT
T ss_pred             eEEEEECCC-CeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcc-hhheeecCCCCcEEEEEEcCC
Confidence            999999974 6777888999999999982        348999999999999999875 466778899999999999999


Q ss_pred             CcEEEEEe-cCeEEEEECCCCCCCccccee----eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEee--------
Q psy14511        337 GRYLASGS-NNTVKIWDFRQLDAKRPLGLI----VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKI--------  403 (488)
Q Consensus       337 ~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~----~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~--------  403 (488)
                      +++|++++ |+.|++||+.+.+....+...    ..+|+|++.+++++  . +..+++|++.....+..+..        
T Consensus       208 g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~--~-~~~i~v~~~~~~~~~~~~~~~~~~~~~~  284 (319)
T 3frx_A          208 GTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAA--T-ATGIKVFSLDPQYLVDDLRPEFAGYSKA  284 (319)
T ss_dssp             SSEEEEEETTCEEEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEE--E-TTEEEEEEETTEEEEEEECCCCTTCCGG
T ss_pred             CCEEEEEeCCCeEEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEE--c-CCCcEEEEeCcCeeeeccCccccccccC
Confidence            99999999 699999999987544333221    22999999999983  3 45699999998877766643        


Q ss_pred             ccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCC
Q psy14511        404 HQERILSAVLSPDQTCVAAASADETISIWNCFPR  437 (488)
Q Consensus       404 ~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~  437 (488)
                      |...+.+++|+|||++|++|+.||.|++||+.++
T Consensus       285 ~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~  318 (319)
T 3frx_A          285 AEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA  318 (319)
T ss_dssp             GCCCEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred             cCcceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence            4567999999999999999999999999998764

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=100.00  E-value=3.4e-43  Score=315.20  Aligned_cols=296  Identities=15%  Similarity=0.194  Sum_probs=224.3

Q ss_pred             EEEEEcccCcccceeecccCceEEEEEEccCCcEEEEecCCeEEEEeccccC--------cCCCcccccccccceeEEEE
Q psy14511         17 ILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLD--------AKRPQVNNQCHLSAVKAIAW   88 (488)
Q Consensus        17 i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~--------~~~~~~~~~~h~~~v~~l~~   88 (488)
                      .+.|++....     ...|...|.+++|+|||++|++++|+++++||.....        ..........|...|.+++|
T Consensus        16 ~r~w~~~~~~-----~~~~~~~v~~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~   90 (344)
T 4gqb_B           16 AREWNLPPNA-----PACMERQLEAARYRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTW   90 (344)
T ss_dssp             -------CCS-----CSSCCSEEEEEEECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEE
T ss_pred             ccccCCCCCC-----cccccCCEEEEEECCCCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEE
Confidence            4567765433     2356778999999999999999998888888743210        00111112336678999999


Q ss_pred             ecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccc
Q psy14511         89 CPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSP  168 (488)
Q Consensus        89 ~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (488)
                      +|++ .+++++.   ||+|++||+.+++......                                              
T Consensus        91 s~d~-~l~~~s~---dg~v~lWd~~~~~~~~~~~----------------------------------------------  120 (344)
T 4gqb_B           91 VGER-GILVASD---SGAVELWELDENETLIVSK----------------------------------------------  120 (344)
T ss_dssp             ETTT-EEEEEET---TSEEEEEEECTTSSCEEEE----------------------------------------------
T ss_pred             eCCC-eEEEEEC---CCEEEEEeccCCCceeEee----------------------------------------------
Confidence            9986 5676665   9999999998776432211                                              


Q ss_pred             eeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEE
Q psy14511        169 TQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVA  248 (488)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~  248 (488)
                                                                                       ....+ |...|++++
T Consensus       121 -----------------------------------------------------------------~~~~~-H~~~V~~v~  134 (344)
T 4gqb_B          121 -----------------------------------------------------------------FCKYE-HDDIVSTVS  134 (344)
T ss_dssp             -----------------------------------------------------------------EEEEC-CSSCEEEEE
T ss_pred             -----------------------------------------------------------------ccccC-CCCCEEEEE
Confidence                                                                             11122 888999999


Q ss_pred             EcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cC-CEEEEeecCCeEEEEECcCCCccceee--ec
Q psy14511        249 WKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NG-NLLSCGTIGGNILHYDVRTHSDYPTAI--TR  323 (488)
Q Consensus       249 ~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~  323 (488)
                      |+|++++|+++ +.|+.|++||+++++++..+.+|...|.+++|  ++ .++++++.|+.|++||+++++ ....+  ..
T Consensus       135 ~spdg~~l~sg-s~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~-~~~~~~~~~  212 (344)
T 4gqb_B          135 VLSSGTQAVSG-SKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPK-PASQIGCSA  212 (344)
T ss_dssp             ECTTSSEEEEE-ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSS-CEEECC---
T ss_pred             ECCCCCEEEEE-eCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccc-eeeeeecce
Confidence            99999999999 99999999999999999999999999999999  44 578999999999999999865 33333  34


Q ss_pred             CCccEEEEEEccC-CcEEEEEe-cCeEEEEECCCCCCCccccee-----eeeecCCCC-EEEEEccCCCCeEEEEeCCCc
Q psy14511        324 EGDVVCGLKWSPN-GRYLASGS-NNTVKIWDFRQLDAKRPLGLI-----VPKLKREGR-ELVTSHGKQDCSLKMWEYPRL  395 (488)
Q Consensus       324 ~~~~i~~~~~s~~-~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~-----~~~~~~~~~-~l~~~~g~~~~~i~i~d~~~~  395 (488)
                      +...+.+++|+|+ +++|++++ |+.|++||+++++....+...     ..+|+|++. +|++  |+.|++|++||+.++
T Consensus       213 ~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~las--gs~D~~i~vwd~~~~  290 (344)
T 4gqb_B          213 PGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLAS--LSEDCSLAVLDSSLS  290 (344)
T ss_dssp             -CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEE--EETTSCEEEECTTCC
T ss_pred             eeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEE--EeCCCeEEEEECCCC
Confidence            5567899999995 57888888 699999999988665544332     128999985 6777  789999999999988


Q ss_pred             ceeEEEeeccccEEEEEEcCCCC-EEEEEeCCCcEEEEecCCCC
Q psy14511        396 HLIEELKIHQERILSAVLSPDQT-CVAAASADETISIWNCFPRD  438 (488)
Q Consensus       396 ~~~~~~~~~~~~v~~~~~s~~~~-~l~t~~~dg~v~iw~~~~~~  438 (488)
                      +++ .+.+|.+.|++++|+|+++ +|++++.||+|++|++.+..
T Consensus       291 ~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~  333 (344)
T 4gqb_B          291 ELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP  333 (344)
T ss_dssp             EEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred             cEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence            765 5789999999999999986 57799999999999998754

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=100.00  E-value=5.3e-43  Score=342.53  Aligned_cols=381  Identities=14%  Similarity=0.195  Sum_probs=288.4

Q ss_pred             CCc-eEEEeecCCeEEEEEcccCcccceeecccCc---eEEEEEEccC-CcEEEEec-CCeEEEEeccccCcCCCcccc-
Q psy14511          4 NGN-LLSCGTIGGNILHYDVRTHSDYPTAITREGD---VVCGLKWSPN-GRYLASGS-NNTVKIWDFRQLDAKRPQVNN-   76 (488)
Q Consensus         4 dg~-~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~---~V~~l~~sp~-g~~las~~-d~~i~vwd~~~~~~~~~~~~~-   76 (488)
                      +++ +|++++.||.|++||+.+++.+ ..+.+|..   .|.+++|+|+ +++|++++ |+.|++||+.+++.   +..+ 
T Consensus       171 ~~~~~l~~~~~d~~v~vwd~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~---~~~~~  246 (615)
T 1pgu_A          171 SRPMRSMTVGDDGSVVFYQGPPFKFS-ASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEF---LKYIE  246 (615)
T ss_dssp             SSSCEEEEEETTTEEEEEETTTBEEE-EEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCE---EEECC
T ss_pred             CCCcEEEEEeCCCcEEEEeCCCccee-eeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCE---eEEec
Confidence            565 8999999999999999888744 56788998   9999999999 99999998 99999999987543   3334 


Q ss_pred             c---ccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeec
Q psy14511         77 Q---CHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEI  153 (488)
Q Consensus        77 ~---~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (488)
                      .   +|...|.+++|+ +++++++++.   |+.|++||+.+++.+..+..+...................+...      
T Consensus       247 ~~~~~~~~~v~~~~~~-~~~~l~~~~~---d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------  316 (615)
T 1pgu_A          247 DDQEPVQGGIFALSWL-DSQKFATVGA---DATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLS------  316 (615)
T ss_dssp             BTTBCCCSCEEEEEES-SSSEEEEEET---TSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEE------
T ss_pred             ccccccCCceEEEEEc-CCCEEEEEcC---CCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEE------
Confidence            4   799999999999 8888887776   99999999999998887776532111111100000111111110      


Q ss_pred             cccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEE
Q psy14511        154 DRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLL  233 (488)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~  233 (488)
                      .++.+..+....                  ......+    ......+..+.+ ++ +++++.|+.|++|++.   .   
T Consensus       317 ~~g~i~~~d~~~------------------~~~~~~~----~~~~~~v~~~~~-~~-l~~~~~dg~i~~w~~~---~---  366 (615)
T 1pgu_A          317 LDGTLNFYELGH------------------DEVLKTI----SGHNKGITALTV-NP-LISGSYDGRIMEWSSS---S---  366 (615)
T ss_dssp             TTSCEEEEETTE------------------EEEEEEE----CCCSSCEEEEET-TT-TEEEETTSCEEETTTT---E---
T ss_pred             CCCCEEEEECCC------------------CcEEEEE----eCCCCCEEEEEe-cC-cEEECCCCeEEEEEch---h---
Confidence            011111110000                  0000000    012345778999 77 9999999999999998   1   


Q ss_pred             EecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcc----------------------------------eeeee
Q psy14511        234 VEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEE----------------------------------RLIQK  279 (488)
Q Consensus       234 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~----------------------------------~~~~~  279 (488)
                      +. .. |...|.+++| ++++.++++ +.|+.+++||+.++                                  +.+..
T Consensus       367 ~~-~~-~~~~v~~~~~-~~~~~l~~~-~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~  442 (615)
T 1pgu_A          367 MH-QD-HSNLIVSLDN-SKAQEYSSI-SWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKS  442 (615)
T ss_dssp             EE-CC-CCSCEEEEEC-CSTTCCEEE-ETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred             hc-Cc-ccCceEEEEE-CCCcEEEEE-eCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeee
Confidence            22 33 8889999999 656788888 88999999887642                                  23333


Q ss_pred             eccccccEEEEEecCCEEEEeec-CCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCC
Q psy14511        280 LRTHMHQVIAMCWNGNLLSCGTI-GGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLD  357 (488)
Q Consensus       280 ~~~~~~~v~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~  357 (488)
                      +. +...+.++++.++++++++. |+.|++||+.........+..|...|.+++|+|++++|++++ |+.|++||+.+++
T Consensus       443 ~~-~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~  521 (615)
T 1pgu_A          443 VR-LNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSRE  521 (615)
T ss_dssp             EE-CSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred             cc-cCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCc
Confidence            32 67788999999999999999 999999999875322156778999999999999999999999 6999999999886


Q ss_pred             CCcccce-e-----eeeecC----------CCCEEEEEccCCCCeEEEEeCCCc-ceeEEEeeccccEEEEEEcCCCCEE
Q psy14511        358 AKRPLGL-I-----VPKLKR----------EGRELVTSHGKQDCSLKMWEYPRL-HLIEELKIHQERILSAVLSPDQTCV  420 (488)
Q Consensus       358 ~~~~~~~-~-----~~~~~~----------~~~~l~~~~g~~~~~i~i~d~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l  420 (488)
                      ....+.. .     ..+|+|          ++++|++  ++.|+.|++||+.++ +++..+.+|...|++++|+|+++ |
T Consensus       522 ~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~--~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l  598 (615)
T 1pgu_A          522 VKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVAT--GSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-L  598 (615)
T ss_dssp             EEECCSCCCSSCEEEEEECCCC------CCSCCEEEE--EETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-E
T ss_pred             ceeEeecCCCCceeEEEEcCccccccccccCCCEEEE--EcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-e
Confidence            6554432 1     229999          9999999  789999999999998 78889999999999999999999 9


Q ss_pred             EEEeCCCcEEEEecCC
Q psy14511        421 AAASADETISIWNCFP  436 (488)
Q Consensus       421 ~t~~~dg~v~iw~~~~  436 (488)
                      ++++.||.|++|++..
T Consensus       599 ~s~~~d~~v~iw~~~~  614 (615)
T 1pgu_A          599 VSSGADACIKRWNVVL  614 (615)
T ss_dssp             EEEETTSCEEEEEEC-
T ss_pred             EEecCCceEEEEeeec
Confidence            9999999999999875

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=6.8e-43  Score=322.54  Aligned_cols=270  Identities=17%  Similarity=0.300  Sum_probs=231.6

Q ss_pred             ccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccc
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHL   80 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~   80 (488)
                      +.++++||+|+.||+|+|||+.+++. ...+.+|.+.|.+++|+|++++|++|+ |++|++||+.++   ..+..+.+|.
T Consensus       117 ~p~~~~l~s~s~Dg~i~vwd~~~~~~-~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~---~~~~~~~~h~  192 (410)
T 1vyh_C          117 HPVFSVMVSASEDATIKVWDYETGDF-ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF---ECIRTMHGHD  192 (410)
T ss_dssp             CSSSSEEEEEESSSCEEEEETTTCCC-CEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSS---CEEECCCCCS
T ss_pred             cCCCCEEEEEeCCCeEEEEECCCCcE-EEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC---ceeEEEcCCC
Confidence            34789999999999999999999884 467899999999999999999999998 999999999874   3455678899


Q ss_pred             cceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceec
Q psy14511         81 SAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLN  160 (488)
Q Consensus        81 ~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (488)
                      ..|.+++|+|+++++++++.   |++|++||+.++.++..+..+...+..+.+.+                         
T Consensus       193 ~~V~~v~~~p~~~~l~s~s~---D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~-------------------------  244 (410)
T 1vyh_C          193 HNVSSVSIMPNGDHIVSASR---DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ-------------------------  244 (410)
T ss_dssp             SCEEEEEECSSSSEEEEEET---TSEEEEEETTTCCEEEEEECCSSCEEEEEECT-------------------------
T ss_pred             CCEEEEEEeCCCCEEEEEeC---CCeEEEEECCCCcEEEEEeCCCccEEEEEECC-------------------------
Confidence            99999999999988877776   99999999999988877766533222211111                         


Q ss_pred             cccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCC
Q psy14511        161 QSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYD  240 (488)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~  240 (488)
                                                                    ++..+++++.|+.|++||+.+++....+..   |
T Consensus       245 ----------------------------------------------~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~---h  275 (410)
T 1vyh_C          245 ----------------------------------------------DGTLIASCSNDQTVRVWVVATKECKAELRE---H  275 (410)
T ss_dssp             ----------------------------------------------TSSEEEEEETTSCEEEEETTTCCEEEEECC---C
T ss_pred             ----------------------------------------------CCCEEEEEcCCCeEEEEECCCCceeeEecC---C
Confidence                                                          224577888999999999999887665543   8


Q ss_pred             CCceEEEEEcCC--------------------CCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEE
Q psy14511        241 NAYISCVAWKPR--------------------TTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLS  298 (488)
Q Consensus       241 ~~~i~~~~~~~~--------------------~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~  298 (488)
                      ...|.+++|+|+                    +.+++++ +.|+.|++||+++++++..+.+|...|.+++|  ++++|+
T Consensus       276 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sg-s~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~  354 (410)
T 1vyh_C          276 RHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG-SRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL  354 (410)
T ss_dssp             SSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEE-ETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEE
T ss_pred             CceEEEEEEcCcccccchhhhccccccccCCCCCEEEEE-eCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEE
Confidence            899999999996                    5678888 99999999999999999999999999999999  689999


Q ss_pred             EeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECC
Q psy14511        299 CGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFR  354 (488)
Q Consensus       299 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~  354 (488)
                      +++.||.|++||+.++ .....+..|...|.+++|+|++.+|++++ |+.|++|+++
T Consensus       355 s~s~D~~i~vwd~~~~-~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r  410 (410)
T 1vyh_C          355 SCADDKTLRVWDYKNK-RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR  410 (410)
T ss_dssp             EEETTTEEEEECCTTS-CCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred             EEeCCCeEEEEECCCC-ceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence            9999999999999875 57788899999999999999999999999 6999999864

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.7e-42  Score=323.20  Aligned_cols=344  Identities=12%  Similarity=0.211  Sum_probs=260.2

Q ss_pred             ccCCc-eEEEeecCCeEEEEEc----ccCcc-----cceeecc----------cCceEEEEEEccCCcEEEEec-CCeEE
Q psy14511          2 CWNGN-LLSCGTIGGNILHYDV----RTHSD-----YPTAITR----------EGDVVCGLKWSPNGRYLASGS-NNTVK   60 (488)
Q Consensus         2 ~~dg~-~la~g~~dg~i~iwd~----~~~~~-----~~~~~~~----------h~~~V~~l~~sp~g~~las~~-d~~i~   60 (488)
                      +.||+ +||+|+.||.|++||+    .+++.     ....+..          |.+.|++++|+|++++|++++ |+.|+
T Consensus        54 s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~  133 (425)
T 1r5m_A           54 NPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGVENGELR  133 (425)
T ss_dssp             CSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEEETTSCEE
T ss_pred             CCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEEEeCCCeEE
Confidence            34788 9999999999999999    77662     1222222          688999999999999999998 99999


Q ss_pred             EEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCcccccccccccccc
Q psy14511         61 IWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKK  140 (488)
Q Consensus        61 vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (488)
                      +||..    ...+..+.+|...|.+++|+|+++++++++.   |+.|++||+.+++.+..+..+............    
T Consensus       134 i~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~----  202 (425)
T 1r5m_A          134 LWNKT----GALLNVLNFHRAPIVSVKWNKDGTHIISMDV---ENVTILWNVISGTVMQHFELKETGGSSINAENH----  202 (425)
T ss_dssp             EEETT----SCEEEEECCCCSCEEEEEECTTSSEEEEEET---TCCEEEEETTTTEEEEEECCC----------------
T ss_pred             EEeCC----CCeeeeccCCCccEEEEEECCCCCEEEEEec---CCeEEEEECCCCcEEEEeeccccCccceeeccc----
Confidence            99933    2344557789999999999999998888776   999999999999887766554321100000000    


Q ss_pred             ceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC-CCcEEEEECCCe
Q psy14511        141 RRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG-YHDTLAVALDTS  219 (488)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~  219 (488)
                                                                            ......+..+.|. ++.+++++.++.
T Consensus       203 ------------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~g~  228 (425)
T 1r5m_A          203 ------------------------------------------------------SGDGSLGVDVEWVDDDKFVIPGPKGA  228 (425)
T ss_dssp             ---------------------------------------------------------CCCBSCCEEEETTEEEEECGGGC
T ss_pred             ------------------------------------------------------cCCcceeeEEEEcCCCEEEEEcCCCe
Confidence                                                                  0000011223332 356777889999


Q ss_pred             EEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEE
Q psy14511        220 VYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLL  297 (488)
Q Consensus       220 v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l  297 (488)
                      |++||+.+++....+..   |...|.+++|+|++++++++ +.|+.|++||+++++.+..+..|...+.+++|  ++ .+
T Consensus       229 i~~~d~~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l  303 (425)
T 1r5m_A          229 IFVYQITEKTPTGKLIG---HHGPISVLEFNDTNKLLLSA-SDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KV  303 (425)
T ss_dssp             EEEEETTCSSCSEEECC---CSSCEEEEEEETTTTEEEEE-ETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EE
T ss_pred             EEEEEcCCCceeeeecc---CCCceEEEEECCCCCEEEEE-cCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EE
Confidence            99999999877666553   88899999999999999999 89999999999999999999999999999999  45 99


Q ss_pred             EEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEE
Q psy14511        298 SCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGREL  376 (488)
Q Consensus       298 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l  376 (488)
                      ++++.|+.|++||+++. .....+..|...|.+++|+|++++|++++ |+.|++||+.+.+....             .+
T Consensus       304 ~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~-------------~~  369 (425)
T 1r5m_A          304 ISCSMDGSVRLWSLKQN-TLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSR-------------SL  369 (425)
T ss_dssp             EEEETTSEEEEEETTTT-EEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC------------------
T ss_pred             EEEeCCCcEEEEECCCC-cEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCcccee-------------ee
Confidence            99999999999999885 46777888899999999999999999999 59999999976531110             00


Q ss_pred             EEEccCCCCeEEEEeCCCcceeEEEeeccc--cEEEEEEcCCCCEEEEEeCCCcEEEEecC
Q psy14511        377 VTSHGKQDCSLKMWEYPRLHLIEELKIHQE--RILSAVLSPDQTCVAAASADETISIWNCF  435 (488)
Q Consensus       377 ~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~--~v~~~~~s~~~~~l~t~~~dg~v~iw~~~  435 (488)
                      .   +..++.   +.....+++..+.+|..  .|++++|+|++++|++++.||.|++|+++
T Consensus       370 ~---~~~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~  424 (425)
T 1r5m_A          370 Y---GNRDGI---LNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP  424 (425)
T ss_dssp             ---------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred             e---cccccc---cCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence            0   122222   22223456788888976  99999999999999999999999999986

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=100.00  E-value=2.7e-42  Score=311.20  Aligned_cols=306  Identities=17%  Similarity=0.244  Sum_probs=236.1

Q ss_pred             ceeecccCceEEEEEE-----cc-CCcEEEEec-CCeEEEEeccccCcC----CCcccccccccceeEEEEecCCCeEEe
Q psy14511         29 PTAITREGDVVCGLKW-----SP-NGRYLASGS-NNTVKIWDFRQLDAK----RPQVNNQCHLSAVKAIAWCPWEPTLLA   97 (488)
Q Consensus        29 ~~~~~~h~~~V~~l~~-----sp-~g~~las~~-d~~i~vwd~~~~~~~----~~~~~~~~h~~~v~~l~~~~~~~~l~~   97 (488)
                      ...+.+|.+.|++++|     +| ++++|++|+ |++|++||+.+.+..    .+...+.+|...|.+++|+|++.++++
T Consensus        14 ~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s   93 (343)
T 2xzm_R           14 RGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAIS   93 (343)
T ss_dssp             EEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEE
T ss_pred             eeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEE
Confidence            3568899999999999     77 999999999 999999999754321    234457889999999999999988777


Q ss_pred             eeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeeccccc
Q psy14511         98 TGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGK  177 (488)
Q Consensus        98 ~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (488)
                      ++.   |++|++||+.+++.+..+..+...+..+.+++                                          
T Consensus        94 ~s~---D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp------------------------------------------  128 (343)
T 2xzm_R           94 SSW---DKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSP------------------------------------------  128 (343)
T ss_dssp             EET---TSEEEEEETTSSCEEEEEECCCSCEEEEEECS------------------------------------------
T ss_pred             EcC---CCcEEEEECCCCcEEEEEcCCCCcEEEEEECC------------------------------------------
Confidence            776   99999999999988877776644333333222                                          


Q ss_pred             ccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCC----
Q psy14511        178 LPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRT----  253 (488)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----  253 (488)
                                                   .+..+++++.|+.|++||+............+ |...+.+++|+|++    
T Consensus       129 -----------------------------~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~  178 (343)
T 2xzm_R          129 -----------------------------DNRQILSAGAEREIKLWNILGECKFSSAEKEN-HSDWVSCVRYSPIMKSAN  178 (343)
T ss_dssp             -----------------------------STTEEEEEETTSCEEEEESSSCEEEECCTTTS-CSSCEEEEEECCCCCSCS
T ss_pred             -----------------------------CCCEEEEEcCCCEEEEEeccCCceeeeecccC-CCceeeeeeecccccccc
Confidence                                         22468888899999999998543333222234 88899999999987    


Q ss_pred             ------CeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCC
Q psy14511        254 ------TDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREG  325 (488)
Q Consensus       254 ------~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~  325 (488)
                            .+++++ +.|+.|++||. ..+....+.+|...|.+++|  ++++|++|+.||.|++||+.........+ .+.
T Consensus       179 ~~~~~~~~l~s~-~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~-~~~  255 (343)
T 2xzm_R          179 KVQPFAPYFASV-GWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREF-DAG  255 (343)
T ss_dssp             CCCSSCCEEEEE-ETTSEEEEEET-TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEE-ECS
T ss_pred             ccCCCCCEEEEE-cCCCEEEEEcC-CCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceee-cCC
Confidence                  678888 99999999994 45677788899999999999  78999999999999999996544444443 345


Q ss_pred             ccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeecc
Q psy14511        326 DVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQ  405 (488)
Q Consensus       326 ~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~  405 (488)
                      ..|.+++|+|++++++++.|+.+++||+.+.+...                          +..+............+|.
T Consensus       256 ~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~  309 (343)
T 2xzm_R          256 STINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKAP--------------------------VCTIEAEPITKAEGQKGKN  309 (343)
T ss_dssp             SCEEEEEECSSSCEEEEEESSCEEEEESSSCCSCS--------------------------EEECCCCSGGGBTTBCCSC
T ss_pred             CcEEEEEECCCCCEEEEECCCCEEEEEeCCCCCCc--------------------------eEEeecCcchhhhhhcCCC
Confidence            56999999999999998888889999997653211                          0000000001111234688


Q ss_pred             ccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCC
Q psy14511        406 ERILSAVLSPDQTCVAAASADETISIWNCFPRD  438 (488)
Q Consensus       406 ~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~  438 (488)
                      ..|++++|+|++++|++|+.||.|++|++++++
T Consensus       310 ~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g~  342 (343)
T 2xzm_R          310 PQCTSLAWNALGKKLFAGFTDGVIRTFSFETSA  342 (343)
T ss_dssp             CCEEEEEECSSSCCEEEEETTSEEEEEEEEEEE
T ss_pred             CceEEEEECCCCCeEEEecCCceEEEEEEEccC
Confidence            899999999999999999999999999987653

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=100.00  E-value=9.1e-42  Score=308.35  Aligned_cols=303  Identities=17%  Similarity=0.292  Sum_probs=235.0

Q ss_pred             cceeecccCceEEEEEEccC-CcEEEEec-CCeEEEEeccccCcC--CCcccccccccceeEEEEecCCCeEEeeeCCcc
Q psy14511         28 YPTAITREGDVVCGLKWSPN-GRYLASGS-NNTVKIWDFRQLDAK--RPQVNNQCHLSAVKAIAWCPWEPTLLATGGGIC  103 (488)
Q Consensus        28 ~~~~~~~h~~~V~~l~~sp~-g~~las~~-d~~i~vwd~~~~~~~--~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~  103 (488)
                      +..+|.||.+.|++|+|+|+ +++||||+ |++|+|||+.+.+..  .+...+.+|...|.+++|+|+++++++++.   
T Consensus        30 l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~---  106 (340)
T 4aow_A           30 LRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSW---  106 (340)
T ss_dssp             EEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEET---
T ss_pred             EEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcc---
Confidence            44578999999999999997 68999998 999999999865432  234457889999999999999998888776   


Q ss_pred             cceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeeccccccccccc
Q psy14511        104 DQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVK  183 (488)
Q Consensus       104 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (488)
                      |+.|++|+.....................                                                   
T Consensus       107 d~~i~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------------------------  135 (340)
T 4aow_A          107 DGTLRLWDLTTGTTTRRFVGHTKDVLSVA---------------------------------------------------  135 (340)
T ss_dssp             TSEEEEEETTTTEEEEEEECCSSCEEEEE---------------------------------------------------
T ss_pred             cccceEEeecccceeeeecCCCCceeEEE---------------------------------------------------
Confidence            99999999988776555444322111110                                                   


Q ss_pred             CCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCC--CeEEEEeC
Q psy14511        184 AKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRT--TDLAVTNT  261 (488)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~l~~~~~  261 (488)
                                          .......+++++.|+.+++||....... .....+ |...+.+++|++++  ..++++ +
T Consensus       136 --------------------~~~~~~~l~s~s~d~~~~~~d~~~~~~~-~~~~~~-~~~~v~~~~~~~~~~~~~~~s~-~  192 (340)
T 4aow_A          136 --------------------FSSDNRQIVSGSRDKTIKLWNTLGVCKY-TVQDES-HSEWVSCVRFSPNSSNPIIVSC-G  192 (340)
T ss_dssp             --------------------ECTTSSCEEEEETTSCEEEECTTSCEEE-EECSSS-CSSCEEEEEECSCSSSCEEEEE-E
T ss_pred             --------------------EeecCccceeecCCCeEEEEEeCCCceE-EEEecc-ccCcccceEEccCCCCcEEEEE-c
Confidence                                1112356888899999999998776543 333444 88899999999875  345566 8


Q ss_pred             CCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcE
Q psy14511        262 CTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRY  339 (488)
Q Consensus       262 ~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~  339 (488)
                      .|+.|++||+++++.+..+.+|...|.+++|  ++++|++++.||.|++||+++.. ....+.. ...+.+++|+|++.+
T Consensus       193 ~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~-~~~~~~~-~~~v~~~~~~~~~~~  270 (340)
T 4aow_A          193 WDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK-HLYTLDG-GDIINALCFSPNRYW  270 (340)
T ss_dssp             TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTE-EEEEEEC-SSCEEEEEECSSSSE
T ss_pred             CCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCc-eeeeecC-CceEEeeecCCCCce
Confidence            9999999999999999999999999999999  68999999999999999999853 4444444 457999999999988


Q ss_pred             EEEEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCE
Q psy14511        340 LASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTC  419 (488)
Q Consensus       340 l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~  419 (488)
                      ++++.|+.|++||+++..                              .+..+..........+|...|++++|+||+++
T Consensus       271 ~~~~~d~~i~iwd~~~~~------------------------------~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~  320 (340)
T 4aow_A          271 LCAATGPSIKIWDLEGKI------------------------------IVDELKQEVISTSSKAEPPQCTSLAWSADGQT  320 (340)
T ss_dssp             EEEEETTEEEEEETTTTE------------------------------EEEEECCC-------CCCCCEEEEEECTTSSE
T ss_pred             eeccCCCEEEEEECCCCe------------------------------EEEeccccceeeeccCCCCCEEEEEECCCCCE
Confidence            888778999999987541                              12222222333455678999999999999999


Q ss_pred             EEEEeCCCcEEEEecCCCCc
Q psy14511        420 VAAASADETISIWNCFPRDK  439 (488)
Q Consensus       420 l~t~~~dg~v~iw~~~~~~~  439 (488)
                      |++|+.||.|++||+.+|.+
T Consensus       321 l~sgs~Dg~v~iW~~~tGtr  340 (340)
T 4aow_A          321 LFAGYTDNLVRVWQVTIGTR  340 (340)
T ss_dssp             EEEEETTSCEEEEEEEC---
T ss_pred             EEEEeCCCEEEEEeCCCcCC
Confidence            99999999999999998763

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.1e-43  Score=330.34  Aligned_cols=322  Identities=16%  Similarity=0.224  Sum_probs=255.0

Q ss_pred             cCCc-eEEEe----------ecCCeEEEEEcccCccc-ceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCc
Q psy14511          3 WNGN-LLSCG----------TIGGNILHYDVRTHSDY-PTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDA   69 (488)
Q Consensus         3 ~dg~-~la~g----------~~dg~i~iwd~~~~~~~-~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~   69 (488)
                      .||+ +||+|          +.||.|+|||+.++... ......|...|.+++|+|++++|++++ |+.|++||+.+...
T Consensus        22 p~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~  101 (416)
T 2pm9_A           22 HDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANN  101 (416)
T ss_dssp             SSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTS
T ss_pred             CCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeEEEeecccccc
Confidence            3776 99999          88999999999987532 122346889999999999999999998 99999999986322


Q ss_pred             -CCCcccccccccceeEEEEecC-CCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEE
Q psy14511         70 -KRPQVNNQCHLSAVKAIAWCPW-EPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFL  147 (488)
Q Consensus        70 -~~~~~~~~~h~~~v~~l~~~~~-~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (488)
                       ...+..+.+|...|.+++|+|+ ++++++++.   |+.|++||+.+++.......                        
T Consensus       102 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~---dg~v~iwd~~~~~~~~~~~~------------------------  154 (416)
T 2pm9_A          102 AINSMARFSNHSSSVKTVKFNAKQDNVLASGGN---NGEIFIWDMNKCTESPSNYT------------------------  154 (416)
T ss_dssp             CCCEEEECCCSSSCCCEEEECSSSTTBEEEECS---SSCEEBCBTTTTSSCTTTCC------------------------
T ss_pred             cccchhhccCCccceEEEEEcCCCCCEEEEEcC---CCeEEEEECCCCcccccccc------------------------
Confidence             2255567889999999999998 665555554   99999999987651100000                        


Q ss_pred             EeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCC
Q psy14511        148 LHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKT  227 (488)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~  227 (488)
                                                                                                      
T Consensus       155 --------------------------------------------------------------------------------  154 (416)
T 2pm9_A          155 --------------------------------------------------------------------------------  154 (416)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CceEEEEecCCCCCCceEEEEEcCC-CCeEEEEeCCCCcEEEEECCcceeeeeeccc------cccEEEEEe--cC-CEE
Q psy14511        228 NKTQLLVEYPTYDNAYISCVAWKPR-TTDLAVTNTCTEYIDLWHEQEERLIQKLRTH------MHQVIAMCW--NG-NLL  297 (488)
Q Consensus       228 ~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~------~~~v~~~~~--~~-~~l  297 (488)
                        ......... |...|.+++|+|+ +..++++ +.|+.|++||+++++.+..+..+      ...+.+++|  ++ .++
T Consensus       155 --~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~-~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l  230 (416)
T 2pm9_A          155 --PLTPGQSMS-SVDEVISLAWNQSLAHVFASA-GSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRV  230 (416)
T ss_dssp             --CBCCCCSCC-SSCCCCEEEECSSCTTEEEEE-SSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEE
T ss_pred             --ccccccccC-CCCCeeEEEeCCCCCcEEEEE-cCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEE
Confidence              000000111 7788999999999 6777777 99999999999999998888776      789999999  33 689


Q ss_pred             EEeecCC---eEEEEECcCCCccceeee-cCCccEEEEEEcc-CCcEEEEEe-cCeEEEEECCCCCCCccccee-----e
Q psy14511        298 SCGTIGG---NILHYDVRTHSDYPTAIT-REGDVVCGLKWSP-NGRYLASGS-NNTVKIWDFRQLDAKRPLGLI-----V  366 (488)
Q Consensus       298 ~~~~~dg---~i~i~d~~~~~~~~~~~~-~~~~~i~~~~~s~-~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~-----~  366 (488)
                      ++++.|+   .|++||+++.......+. .|...|.+++|+| ++++|++++ |+.|++||+++.+....+...     .
T Consensus       231 ~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~  310 (416)
T 2pm9_A          231 ATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFK  310 (416)
T ss_dssp             EEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCC
T ss_pred             EEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEE
Confidence            9999998   999999998766777777 8999999999999 999999999 699999999987654443322     2


Q ss_pred             eeecCCC-CEEEEEccCCCCeEEEEeCCCcceeEEEee-----------------------------------ccccEEE
Q psy14511        367 PKLKREG-RELVTSHGKQDCSLKMWEYPRLHLIEELKI-----------------------------------HQERILS  410 (488)
Q Consensus       367 ~~~~~~~-~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~-----------------------------------~~~~v~~  410 (488)
                      .+|+|++ +++++  ++.|+.|++||+.+++.......                                   |..++.+
T Consensus       311 ~~~s~~~~~~l~s--~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  388 (416)
T 2pm9_A          311 TKFAPEAPDLFAC--ASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPA  388 (416)
T ss_dssp             EEECTTCTTEEEE--CCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCC
T ss_pred             EEECCCCCCEEEE--EecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccc
Confidence            2999999 78888  78999999999987654322211                                   5677889


Q ss_pred             EEEcCCCCEEEEEeCCCcEEEEecCCC
Q psy14511        411 AVLSPDQTCVAAASADETISIWNCFPR  437 (488)
Q Consensus       411 ~~~s~~~~~l~t~~~dg~v~iw~~~~~  437 (488)
                      ++|+|||++|++++.||.|+||++.+.
T Consensus       389 ~~~s~dg~~la~~~~d~~v~~w~~~~~  415 (416)
T 2pm9_A          389 AHWAFGGKLVQITPDGKGVSITNPKIS  415 (416)
T ss_dssp             CEEETTTEEECBCTTSSCBCCBCCCCC
T ss_pred             eEEeeCCeEEEEeCCCCeEEEEEeccC
Confidence            999999999999999999999999864

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=4.7e-42  Score=304.02  Aligned_cols=267  Identities=17%  Similarity=0.234  Sum_probs=230.5

Q ss_pred             CcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeee
Q psy14511         72 PQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGF  151 (488)
Q Consensus        72 ~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (488)
                      ...++.+|.+.|.+++|+|+++++++++.   |++|++||+.++..+..+.                             
T Consensus         5 ~~~~~~~h~~~V~~~~fsp~~~~l~s~~~---dg~v~lWd~~~~~~~~~~~-----------------------------   52 (304)
T 2ynn_A            5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLY---SGRVELWNYETQVEVRSIQ-----------------------------   52 (304)
T ss_dssp             CEEEEEEECSCEEEEEECSSSSEEEEEET---TSEEEEEETTTTEEEEEEE-----------------------------
T ss_pred             eEEeecCCCCceEEEEECCCCCEEEEEcC---CCcEEEEECCCCceeEEee-----------------------------
Confidence            34457889999999999999998888776   9999999998776432221                             


Q ss_pred             eccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceE
Q psy14511        152 EIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQ  231 (488)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~  231 (488)
                                                                                                      
T Consensus        53 --------------------------------------------------------------------------------   52 (304)
T 2ynn_A           53 --------------------------------------------------------------------------------   52 (304)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEE
Q psy14511        232 LLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHY  309 (488)
Q Consensus       232 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~  309 (488)
                            . |..++.+++|+|++++|+++ +.|+.|++||+.+++.+..+.+|...|.+++|  +++++++|+.|+.|++|
T Consensus        53 ------~-~~~~v~~~~~~~~~~~l~s~-s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lW  124 (304)
T 2ynn_A           53 ------V-TETPVRAGKFIARKNWIIVG-SDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLW  124 (304)
T ss_dssp             ------C-CSSCEEEEEEEGGGTEEEEE-ETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEE
T ss_pred             ------c-cCCcEEEEEEeCCCCEEEEE-CCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEE
Confidence                  1 66789999999999999999 99999999999999999999999999999999  68899999999999999


Q ss_pred             ECcCCCccceeeecCCccEEEEEEcc-CCcEEEEEe-cCeEEEEECCCCCCCcccce------eeeeecC--CCCEEEEE
Q psy14511        310 DVRTHSDYPTAITREGDVVCGLKWSP-NGRYLASGS-NNTVKIWDFRQLDAKRPLGL------IVPKLKR--EGRELVTS  379 (488)
Q Consensus       310 d~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~------~~~~~~~--~~~~l~~~  379 (488)
                      |++++......+.+|...|.+++|+| ++.+|++++ |+.|++||+.+......+..      ....|+|  +++++++ 
T Consensus       125 d~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s-  203 (304)
T 2ynn_A          125 NWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMIT-  203 (304)
T ss_dssp             EGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEE-
T ss_pred             ECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEE-
Confidence            99987666778889999999999999 678999999 69999999987654332211      1125554  7788988 


Q ss_pred             ccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccc-cccccCCcceEEeecCC
Q psy14511        380 HGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKR-KARQVGSGSSLEFAILK  458 (488)
Q Consensus       380 ~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~-~~~~~~~v~~~~~s~~~  458 (488)
                       ++.|++|++||+++++++.++.+|...|.+++|+|++++|++++.||.|++||+.+++... ...+...+.+++|+|++
T Consensus       204 -~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (304)
T 2ynn_A          204 -ASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTG  282 (304)
T ss_dssp             -EETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTC
T ss_pred             -EcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCC
Confidence             7899999999999999999999999999999999999999999999999999999988774 45567889999999988


Q ss_pred             Cc
Q psy14511        459 QP  460 (488)
Q Consensus       459 ~~  460 (488)
                      ..
T Consensus       283 ~~  284 (304)
T 2ynn_A          283 RK  284 (304)
T ss_dssp             GG
T ss_pred             Cc
Confidence            64

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=4.3e-42  Score=306.03  Aligned_cols=267  Identities=16%  Similarity=0.226  Sum_probs=227.3

Q ss_pred             CCceEEEeecCCeEEEEEcccCcc-cceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCccccccccc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSD-YPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLS   81 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~-~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~   81 (488)
                      ++++||+|+.|++|+|||+..++. ....+.+|...|.+++|+|++.++++++ |++|++||+.+++   .+..+..|..
T Consensus        47 ~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~---~~~~~~~~~~  123 (321)
T 3ow8_A           47 NSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGK---QIKSIDAGPV  123 (321)
T ss_dssp             --CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE---EEEEEECCTT
T ss_pred             CCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCC---EEEEEeCCCc
Confidence            577999999999999999987653 2345789999999999999999999998 9999999998754   3444567888


Q ss_pred             ceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecc
Q psy14511         82 AVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQ  161 (488)
Q Consensus        82 ~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (488)
                      .+.+++|+|+++++++++.   |+.+++|++.+++....+..+...+.                                
T Consensus       124 ~~~~~~~spdg~~l~~g~~---dg~v~i~~~~~~~~~~~~~~~~~~v~--------------------------------  168 (321)
T 3ow8_A          124 DAWTLAFSPDSQYLATGTH---VGKVNIFGVESGKKEYSLDTRGKFIL--------------------------------  168 (321)
T ss_dssp             CCCCEEECTTSSEEEEECT---TSEEEEEETTTCSEEEEEECSSSCEE--------------------------------
T ss_pred             cEEEEEECCCCCEEEEEcC---CCcEEEEEcCCCceeEEecCCCceEE--------------------------------
Confidence            9999999999998777766   99999999998887666554432222                                


Q ss_pred             ccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC--CCcEEEEECCCeEEEEECCCCceEEEEecCCC
Q psy14511        162 SKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG--YHDTLAVALDTSVYTWNTKTNKTQLLVEYPTY  239 (488)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~  239 (488)
                                                               .+.|+  +..+++++.|+.|++||+.+++....+.  + 
T Consensus       169 -----------------------------------------~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~--~-  204 (321)
T 3ow8_A          169 -----------------------------------------SIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLE--G-  204 (321)
T ss_dssp             -----------------------------------------EEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC--C-
T ss_pred             -----------------------------------------EEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEc--c-
Confidence                                                     23332  2457778899999999999998766554  3 


Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCcc
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDY  317 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~  317 (488)
                      |..+|.+++|+|++++|+++ +.|+.|++||+++++....+.+|...|.+++|  ++++|++++.|+.|++||++++ .+
T Consensus       205 h~~~v~~l~~spd~~~l~s~-s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~-~~  282 (321)
T 3ow8_A          205 HAMPIRSLTFSPDSQLLVTA-SDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR-TC  282 (321)
T ss_dssp             CSSCCCEEEECTTSCEEEEE-CTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-EE
T ss_pred             cCCceeEEEEcCCCCEEEEE-cCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC-EE
Confidence            88899999999999999999 99999999999999999999999999999999  6899999999999999999885 57


Q ss_pred             ceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECC
Q psy14511        318 PTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFR  354 (488)
Q Consensus       318 ~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~  354 (488)
                      ...+..|...|.+++|+|++++|++++ |+.|++||+.
T Consensus       283 ~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p  320 (321)
T 3ow8_A          283 VHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP  320 (321)
T ss_dssp             EEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred             EEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence            778889999999999999999999999 5999999964

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=100.00  E-value=1.9e-41  Score=311.36  Aligned_cols=304  Identities=18%  Similarity=0.305  Sum_probs=235.3

Q ss_pred             CeEEEEEcccCcccce---eecccCceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCccccccc------------
Q psy14511         15 GNILHYDVRTHSDYPT---AITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCH------------   79 (488)
Q Consensus        15 g~i~iwd~~~~~~~~~---~~~~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h------------   79 (488)
                      ....+|+.........   ...+|...|.+++|+|||++||+|+++.+++|++.+++...   .+..|            
T Consensus        40 ~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~---~l~~~~~~~~~~~~~~~  116 (393)
T 1erj_A           40 DYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVA---RLSDDSAANKDPENLNT  116 (393)
T ss_dssp             SCEEEECTTSCCCEEEEEEEEEECSSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEE---EECC-------------
T ss_pred             ceEEEECCCCCcccCceeEEecCCCCEEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEE---EecCccccccccccccc
Confidence            3455777655442211   12369999999999999999999999999999998754322   22222            


Q ss_pred             ------ccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeec
Q psy14511         80 ------LSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEI  153 (488)
Q Consensus        80 ------~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (488)
                            ...|.+++|+|+++++++++.   |++|++||+.+++....+..+...+..+.+.+                  
T Consensus       117 ~~~~~~~~~v~~v~~s~dg~~l~s~~~---d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p------------------  175 (393)
T 1erj_A          117 SSSPSSDLYIRSVCFSPDGKFLATGAE---DRLIRIWDIENRKIVMILQGHEQDIYSLDYFP------------------  175 (393)
T ss_dssp             ----CCCCBEEEEEECTTSSEEEEEET---TSCEEEEETTTTEEEEEECCCSSCEEEEEECT------------------
T ss_pred             cccCCCceeEEEEEECCCCCEEEEEcC---CCeEEEEECCCCcEEEEEccCCCCEEEEEEcC------------------
Confidence                  234999999999998877776   99999999999988777766644333322222                  


Q ss_pred             cccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEE
Q psy14511        154 DRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLL  233 (488)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~  233 (488)
                                                                           ++..+++++.|+.|++||+.+++....
T Consensus       176 -----------------------------------------------------~~~~l~s~s~d~~v~iwd~~~~~~~~~  202 (393)
T 1erj_A          176 -----------------------------------------------------SGDKLVSGSGDRTVRIWDLRTGQCSLT  202 (393)
T ss_dssp             -----------------------------------------------------TSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred             -----------------------------------------------------CCCEEEEecCCCcEEEEECCCCeeEEE
Confidence                                                                 235688888999999999999987766


Q ss_pred             EecCCCCCCceEEEEEcC-CCCeEEEEeCCCCcEEEEECCcceeeeee-------ccccccEEEEEe--cCCEEEEeecC
Q psy14511        234 VEYPTYDNAYISCVAWKP-RTTDLAVTNTCTEYIDLWHEQEERLIQKL-------RTHMHQVIAMCW--NGNLLSCGTIG  303 (488)
Q Consensus       234 ~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~~i~i~d~~~~~~~~~~-------~~~~~~v~~~~~--~~~~l~~~~~d  303 (488)
                      +.    +...+.+++|+| ++++++++ +.|+.|++||+++++.+..+       .+|...|.+++|  ++++|++++.|
T Consensus       203 ~~----~~~~v~~~~~~~~~~~~l~~~-s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d  277 (393)
T 1erj_A          203 LS----IEDGVTTVAVSPGDGKYIAAG-SLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLD  277 (393)
T ss_dssp             EE----CSSCEEEEEECSTTCCEEEEE-ETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             EE----cCCCcEEEEEECCCCCEEEEE-cCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCC
Confidence            65    556799999999 88889888 99999999999998877766       578999999999  78999999999


Q ss_pred             CeEEEEECcCCC-----------ccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccceeeeeecCC
Q psy14511        304 GNILHYDVRTHS-----------DYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKRE  372 (488)
Q Consensus       304 g~i~i~d~~~~~-----------~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~  372 (488)
                      +.|++||+++..           .+...+.+|...|.+++|+|++++|++++                            
T Consensus       278 ~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs----------------------------  329 (393)
T 1erj_A          278 RSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGS----------------------------  329 (393)
T ss_dssp             SEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEE----------------------------
T ss_pred             CEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEe----------------------------
Confidence            999999997632           12345667888888888888888888775                            


Q ss_pred             CCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcC------CCCEEEEEeCCCcEEEEecCCCC
Q psy14511        373 GRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSP------DQTCVAAASADETISIWNCFPRD  438 (488)
Q Consensus       373 ~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~------~~~~l~t~~~dg~v~iw~~~~~~  438 (488)
                                .|+.|++||+.+++++..+.+|.+.|.+++|+|      ++++||+|+.||.|++|++...+
T Consensus       330 ----------~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~~  391 (393)
T 1erj_A          330 ----------KDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKIA  391 (393)
T ss_dssp             ----------TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC-
T ss_pred             ----------CCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcccccC
Confidence                      344455555555667788899999999999986      68899999999999999987543

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=100.00  E-value=1.5e-41  Score=306.64  Aligned_cols=309  Identities=18%  Similarity=0.291  Sum_probs=255.2

Q ss_pred             ccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCccccc--cc
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQ--CH   79 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~--~h   79 (488)
                      +.||++++++..++.+.+|+....... ....+|...|++++|+|++++|++++|+.|++||+.+++....+..+.  +|
T Consensus        18 s~dg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~   96 (337)
T 1gxr_A           18 TADGQMQPVPFPPDALIGPGIPRHARQ-INTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNR   96 (337)
T ss_dssp             CSSSCEEECCCCTTSSSSTTCCSEEEE-EEEECCSSCCCEEEECSSSSEEEEECBSEEEEEETTSTTCCSCSEEEECSCT
T ss_pred             CCCCCEEEeecCCCcEeccccCCcccc-ceeccCCCceEEEEEecCCcEEEEcCCCeEEEEECCCCCceeeeecccccCC
Confidence            459999998888887777766554433 334589999999999999999999999999999998766555544433  78


Q ss_pred             ccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeecccccee
Q psy14511         80 LSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVL  159 (488)
Q Consensus        80 ~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (488)
                      ...|.+++|+|+++++++++.   |+.|++||+.+++...                                        
T Consensus        97 ~~~v~~~~~~~~~~~l~~~~~---d~~i~~~d~~~~~~~~----------------------------------------  133 (337)
T 1gxr_A           97 DNYIRSCKLLPDGCTLIVGGE---ASTLSIWDLAAPTPRI----------------------------------------  133 (337)
T ss_dssp             TSBEEEEEECTTSSEEEEEES---SSEEEEEECCCC--EE----------------------------------------
T ss_pred             CCcEEEEEEcCCCCEEEEEcC---CCcEEEEECCCCCcce----------------------------------------
Confidence            999999999999988887776   9999999987654210                                        


Q ss_pred             ccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCC
Q psy14511        160 NQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTY  239 (488)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~  239 (488)
                                                                                               ...... 
T Consensus       134 -------------------------------------------------------------------------~~~~~~-  139 (337)
T 1gxr_A          134 -------------------------------------------------------------------------KAELTS-  139 (337)
T ss_dssp             -------------------------------------------------------------------------EEEEEC-
T ss_pred             -------------------------------------------------------------------------eeeccc-
Confidence                                                                                     111112 


Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCcc
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDY  317 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~  317 (488)
                      +...+.+++|+|++++++++ +.++.|++||+++++.+..+..|...+.+++|  +++.+++++.||.|++||+++.+ .
T Consensus       140 ~~~~i~~~~~~~~~~~l~~~-~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~-~  217 (337)
T 1gxr_A          140 SAPACYALAISPDSKVCFSC-CSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGR-Q  217 (337)
T ss_dssp             SSSCEEEEEECTTSSEEEEE-ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE-E
T ss_pred             CCCceEEEEECCCCCEEEEE-eCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCc-e
Confidence            67789999999999999999 89999999999999999999999999999999  68899999999999999998864 3


Q ss_pred             ceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccce----eeeeecCCCCEEEEEccCCCCeEEEEeC
Q psy14511        318 PTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGL----IVPKLKREGRELVTSHGKQDCSLKMWEY  392 (488)
Q Consensus       318 ~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~----~~~~~~~~~~~l~~~~g~~~~~i~i~d~  392 (488)
                      ... ..+...+.+++|+|++++|++++ ++.+++||+.+.+.......    ....|+|+++++++  ++.|+.|++||+
T Consensus       218 ~~~-~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~--~~~dg~i~~~~~  294 (337)
T 1gxr_A          218 LQQ-HDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVS--TGKDNLLNAWRT  294 (337)
T ss_dssp             EEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEE--EETTSEEEEEET
T ss_pred             Eee-ecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEE--ecCCCcEEEEEC
Confidence            333 34677899999999999999999 59999999987753221111    12289999999998  788999999999


Q ss_pred             CCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEec
Q psy14511        393 PRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNC  434 (488)
Q Consensus       393 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~  434 (488)
                      .+++.+.. ..|...|.+++|+|++++|++++.||.|++|++
T Consensus       295 ~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~  335 (337)
T 1gxr_A          295 PYGASIFQ-SKESSSVLSCDISVDDKYIVTGSGDKKATVYEV  335 (337)
T ss_dssp             TTCCEEEE-EECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred             CCCeEEEE-ecCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence            99988755 458889999999999999999999999999996

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=100.00  E-value=6.1e-42  Score=345.84  Aligned_cols=371  Identities=13%  Similarity=0.137  Sum_probs=290.1

Q ss_pred             cCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCccccccccc
Q psy14511          3 WNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLS   81 (488)
Q Consensus         3 ~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~   81 (488)
                      .||++||+|+.||.|+|||+.+++.+ ..+.+|.+.|++++|+|++++|++++ |+.|++||+.++.  .....+.+|..
T Consensus        65 ~~~~~l~~~~~dg~i~vw~~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~--~~~~~~~~~~~  141 (814)
T 3mkq_A           65 ARKNWIIVGSDDFRIRVFNYNTGEKV-VDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW--ALEQTFEGHEH  141 (814)
T ss_dssp             GGGTEEEEEETTSEEEEEETTTCCEE-EEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTS--EEEEEEECCSS
T ss_pred             CCCCEEEEEeCCCeEEEEECCCCcEE-EEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCc--eEEEEEcCCCC
Confidence            38999999999999999999998854 56789999999999999999999998 9999999998642  23345678999


Q ss_pred             ceeEEEEec-CCCeEEeeeCCcccceEEEEecCCCeeeeeeecCC-CccccccccccccccceeEEEEEeeeecccccee
Q psy14511         82 AVKAIAWCP-WEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDS-QQANDETISYREQKKRRHLSFLLHGFEIDRKKVL  159 (488)
Q Consensus        82 ~v~~l~~~~-~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (488)
                      .|.+++|+| ++..+++++.   |+.|++||+.++.....+..+. ..+....+.+.+                      
T Consensus       142 ~v~~~~~~p~~~~~l~~~~~---dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~----------------------  196 (814)
T 3mkq_A          142 FVMCVAFNPKDPSTFASGCL---DRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLP----------------------  196 (814)
T ss_dssp             CEEEEEEETTEEEEEEEEET---TSEEEEEETTCSSCSEEEECCCTTCCCEEEECCST----------------------
T ss_pred             cEEEEEEEcCCCCEEEEEeC---CCeEEEEECCCCcceeEEecCCCCCEEEEEEEECC----------------------
Confidence            999999999 7766666665   9999999998877655544332 111111111100                      


Q ss_pred             ccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCC
Q psy14511        160 NQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTY  239 (488)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~  239 (488)
                                                                     .+..+++++.|+.|++||+.+++....+..   
T Consensus       197 -----------------------------------------------~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~---  226 (814)
T 3mkq_A          197 -----------------------------------------------DKPYMITASDDLTIKIWDYQTKSCVATLEG---  226 (814)
T ss_dssp             -----------------------------------------------TCCEEEEECTTSEEEEEETTTTEEEEEEEC---
T ss_pred             -----------------------------------------------CCCEEEEEeCCCEEEEEECCCCcEEEEEcC---
Confidence                                                           234577778999999999999887666554   


Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCC-EEEEeecCCeEEEEECcCCCc
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGN-LLSCGTIGGNILHYDVRTHSD  316 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~-~l~~~~~dg~i~i~d~~~~~~  316 (488)
                      |...|.+++|+|+++.++++ +.||.|++||+.+++.+..+..|...+.+++|  ++. .+++.+.++.+.+|++.....
T Consensus       227 ~~~~v~~~~~~~~~~~l~~~-~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (814)
T 3mkq_A          227 HMSNVSFAVFHPTLPIIISG-SEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEP  305 (814)
T ss_dssp             CSSCEEEEEECSSSSEEEEE-ETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCCSC
T ss_pred             CCCCEEEEEEcCCCCEEEEE-eCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCCCc
Confidence            78899999999999999999 89999999999999999999999999999999  444 235555577788888764321


Q ss_pred             cc------------------------------------------eeeecCCccEEEEEEccCCcEEEEEecCeEEEEECC
Q psy14511        317 YP------------------------------------------TAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFR  354 (488)
Q Consensus       317 ~~------------------------------------------~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~  354 (488)
                      ..                                          .....+...+.+++|+|+|+++++++++.+.+|++.
T Consensus       306 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~i~~~~  385 (814)
T 3mkq_A          306 TLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVGDGEYVIYTAL  385 (814)
T ss_dssp             CEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEEETTEEEEEETT
T ss_pred             eeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCceeEECCCCCEEEEecCCEEEEEECc
Confidence            10                                          111234445789999999999999999999999986


Q ss_pred             CCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCC---CEEEEEeCCCcEEE
Q psy14511        355 QLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQ---TCVAAASADETISI  431 (488)
Q Consensus       355 ~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~---~~l~t~~~dg~v~i  431 (488)
                      .......-.....+|+|+++++++  +..++.+++|+.        +.+|...+.+++|+|++   ++|++++.|+.|++
T Consensus       386 ~~~~~~~~~i~~~~~spdg~~la~--~~~~g~v~l~~~--------~~~~~~~v~~~~~s~dg~~~~~l~~~~~d~~v~~  455 (814)
T 3mkq_A          386 AWRNKAFGKCQDFVWGPDSNSYAL--IDETGQIKYYKN--------FKEVTSWSVPMHSAIDRLFSGALLGVKSDGFVYF  455 (814)
T ss_dssp             TTEEEEEEECSEEEECTTSSCEEE--ECTTCCEEEEET--------TEECTTCCCCCSSCCCEEECSSSEEEEETTEEEE
T ss_pred             cccccCCCceEEEEEeCCCCeEEE--EeCCCcEEEEEC--------CCCccceEEcCCcCccceecceEEEEecCCEEEE
Confidence            543222112223399999999999  788999999963        35688889999999998   68999999999999


Q ss_pred             EecCCCCccccccccCCcceEEeecCCCceEEE
Q psy14511        432 WNCFPRDKKRKARQVGSGSSLEFAILKQPVSLT  464 (488)
Q Consensus       432 w~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~  464 (488)
                      ||+.+++..........  .+.|+|+++.++..
T Consensus       456 ~d~~~~~~~~~~~~~~~--~v~~s~dg~~la~~  486 (814)
T 3mkq_A          456 FDWDNGTLVRRIDVNAK--DVIWSDNGELVMIV  486 (814)
T ss_dssp             ECTTTCCEEEEESSCEE--EEEECTTSSEEEEE
T ss_pred             EECCcCcEEEEEecCCC--EEEEcCCCCEEEEE
Confidence            99999887754333222  89999999998776

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=100.00  E-value=7.5e-42  Score=309.28  Aligned_cols=279  Identities=16%  Similarity=0.241  Sum_probs=218.5

Q ss_pred             CccCCceEEEeec------CCeEEEEEcccCcccc---eeecccCceEEEEEEccCCcEEEEecCCeEEEEeccccCcCC
Q psy14511          1 MCWNGNLLSCGTI------GGNILHYDVRTHSDYP---TAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKR   71 (488)
Q Consensus         1 ~~~dg~~la~g~~------dg~i~iwd~~~~~~~~---~~~~~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~   71 (488)
                      ++.||++||+|+.      |+.|++|+..++....   ....+|...|.+++|+|++++|+++.|++|+|||+.+++...
T Consensus        50 fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~  129 (357)
T 4g56_B           50 YRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGILVASDSGAVELWEILEKESLL  129 (357)
T ss_dssp             ECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEEEEETTSCEEEC--------C
T ss_pred             ECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEEEEECCCEEEEeeccccceeE
Confidence            3569999999997      7889999987765332   234578899999999999988877679999999998765433


Q ss_pred             Cc-ccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEee
Q psy14511         72 PQ-VNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHG  150 (488)
Q Consensus        72 ~~-~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (488)
                      .. ....+|...|.+++|+|++++|++++.   |++|++||+.+++.+..+..+...+..+.++++.             
T Consensus       130 ~~~~~~~~h~~~V~~v~~spdg~~l~sgs~---dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~-------------  193 (357)
T 4g56_B          130 VNKFAKYEHDDIVKTLSVFSDGTQAVSGGK---DFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGK-------------  193 (357)
T ss_dssp             CCCEEECCCSSCEEEEEECSSSSEEEEEET---TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTC-------------
T ss_pred             EEeeccCCCCCCEEEEEECCCCCEEEEEeC---CCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCC-------------
Confidence            22 234579999999999999998887776   9999999999999888777664433333222211             


Q ss_pred             eeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCce
Q psy14511        151 FEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKT  230 (488)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~  230 (488)
                                                                               ...+++++.|+.|++||+++++.
T Consensus       194 ---------------------------------------------------------~~~~~s~~~dg~v~~wd~~~~~~  216 (357)
T 4g56_B          194 ---------------------------------------------------------DTIFLSCGEDGRILLWDTRKPKP  216 (357)
T ss_dssp             ---------------------------------------------------------SSCEEEEETTSCEEECCTTSSSC
T ss_pred             ---------------------------------------------------------CceeeeeccCCceEEEECCCCce
Confidence                                                                     23577888999999999999887


Q ss_pred             EEEEecCCCCCCceEEEEEcCCCC-eEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cC-CEEEEeecCCeE
Q psy14511        231 QLLVEYPTYDNAYISCVAWKPRTT-DLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NG-NLLSCGTIGGNI  306 (488)
Q Consensus       231 ~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~-~~l~~~~~dg~i  306 (488)
                      ........ +...+.+++|+|++. +++++ +.|+.|++||+++++.+..+.+|...|.+++|  ++ ++|++++.|+.|
T Consensus       217 ~~~~~~~~-~~~~v~~v~~sp~~~~~la~g-~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i  294 (357)
T 4g56_B          217 ATRIDFCA-SDTIPTSVTWHPEKDDTFACG-DETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTV  294 (357)
T ss_dssp             BCBCCCTT-CCSCEEEEEECTTSTTEEEEE-ESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCE
T ss_pred             eeeeeecc-ccccccchhhhhcccceEEEe-ecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEE
Confidence            76666555 778899999999865 55566 99999999999999999999999999999999  44 689999999999


Q ss_pred             EEEECcCCCccceeeecCCccEEEEEEcc-CCcEEEEEe-cCeEEEEECCCC
Q psy14511        307 LHYDVRTHSDYPTAITREGDVVCGLKWSP-NGRYLASGS-NNTVKIWDFRQL  356 (488)
Q Consensus       307 ~i~d~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~-d~~i~iwd~~~~  356 (488)
                      ++||+++++ . ....+|.+.|++++|+| ++++|++++ |+.|++||+.+.
T Consensus       295 ~iwd~~~~~-~-~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~  344 (357)
T 4g56_B          295 AVLDADFSE-V-FRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE  344 (357)
T ss_dssp             EEECTTSCE-E-EEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred             EEEECCCCc-E-eEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence            999998753 3 34458999999999999 799999998 799999999754

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=100.00  E-value=1e-41  Score=305.68  Aligned_cols=277  Identities=13%  Similarity=0.169  Sum_probs=213.3

Q ss_pred             ccCCceEEEeecCCeEEEEEcccC-------c---ccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcC
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTH-------S---DYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAK   70 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~-------~---~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~   70 (488)
                      +.||++|++++ |+++++||....       .   ........|...|.+++|+|+++ |++|+ ||+|+|||+++++..
T Consensus        39 s~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~-l~~~s~dg~v~lWd~~~~~~~  116 (344)
T 4gqb_B           39 RSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGERG-ILVASDSGAVELWELDENETL  116 (344)
T ss_dssp             CTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTTE-EEEEETTSEEEEEEECTTSSC
T ss_pred             CCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCCe-EEEEECCCEEEEEeccCCCce
Confidence            45999999887 778888874311       0   11122335667899999999975 55565 999999999886544


Q ss_pred             CCc-ccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEe
Q psy14511         71 RPQ-VNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLH  149 (488)
Q Consensus        71 ~~~-~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (488)
                      ... ..+.+|.+.|++++|+|++++|++++.   |++|++||+.+++.+..+.++...+..+.++++.            
T Consensus       117 ~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~---d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~------------  181 (344)
T 4gqb_B          117 IVSKFCKYEHDDIVSTVSVLSSGTQAVSGSK---DICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHK------------  181 (344)
T ss_dssp             EEEEEEEECCSSCEEEEEECTTSSEEEEEET---TSCEEEEETTTTEEEEEECCCSSCEEEEEECSSC------------
T ss_pred             eEeeccccCCCCCEEEEEECCCCCEEEEEeC---CCeEEEEECCCCcEEEEEcCcCCceEEEEecCCC------------
Confidence            322 234589999999999999998877776   9999999999999988887775544333322211            


Q ss_pred             eeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCc
Q psy14511        150 GFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNK  229 (488)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~  229 (488)
                                                                                ...+++++.|+.|++||+++++
T Consensus       182 ----------------------------------------------------------~~~l~s~s~D~~v~iwd~~~~~  203 (344)
T 4gqb_B          182 ----------------------------------------------------------DSVFLSCSEDNRILLWDTRCPK  203 (344)
T ss_dssp             ----------------------------------------------------------TTEEEEEETTSCEEEEETTSSS
T ss_pred             ----------------------------------------------------------CCceeeeccccccccccccccc
Confidence                                                                      1236678899999999999998


Q ss_pred             eEEEEecCCCCCCceEEEEEcCCCC-eEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cC-CEEEEeecCCe
Q psy14511        230 TQLLVEYPTYDNAYISCVAWKPRTT-DLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NG-NLLSCGTIGGN  305 (488)
Q Consensus       230 ~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~-~~l~~~~~dg~  305 (488)
                      ....+.... +...+.+++|+|++. +++++ +.|+.|++||+++++++..+.+|...|.+++|  ++ ++|++|+.|+.
T Consensus       204 ~~~~~~~~~-~~~~~~~~~~~p~~~~~l~sg-~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~  281 (344)
T 4gqb_B          204 PASQIGCSA-PGYLPTSLAWHPQQSEVFVFG-DENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCS  281 (344)
T ss_dssp             CEEECC-----CCCEEEEEECSSCTTEEEEE-ETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSC
T ss_pred             eeeeeecce-eeccceeeeecCCCCcceEEe-ccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCe
Confidence            877766554 667899999999654 55666 99999999999999999999999999999999  45 67999999999


Q ss_pred             EEEEECcCCCccceeeecCCccEEEEEEccCCc-EEEEEe-cCeEEEEECCCCC
Q psy14511        306 ILHYDVRTHSDYPTAITREGDVVCGLKWSPNGR-YLASGS-NNTVKIWDFRQLD  357 (488)
Q Consensus       306 i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~-d~~i~iwd~~~~~  357 (488)
                      |++||+++++  ...+.+|.+.|++++|+|+++ +|++++ |++|++|++.+..
T Consensus       282 i~vwd~~~~~--~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~  333 (344)
T 4gqb_B          282 LAVLDSSLSE--LFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP  333 (344)
T ss_dssp             EEEECTTCCE--EEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred             EEEEECCCCc--EEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence            9999998753  456789999999999999986 577887 7999999998653

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=100.00  E-value=4.6e-41  Score=312.88  Aligned_cols=308  Identities=16%  Similarity=0.192  Sum_probs=250.5

Q ss_pred             ccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccc
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHL   80 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~   80 (488)
                      +.||++|++|+.||.|++||+.+++.. ..+..| ..+....|+|++++||+++ |+.|++||+.+++   ....+.+|.
T Consensus        65 s~~g~~l~~~~~d~~v~i~d~~~~~~~-~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~h~  139 (420)
T 3vl1_A           65 EKVGSHLYKARLDGHDFLFNTIIRDGS-KMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNL---QREIDQAHV  139 (420)
T ss_dssp             EEEETTEEEEEETTEEEEEECCSEETT-TTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCE---EEEETTSSS
T ss_pred             eecCCeEEEEEcCCcEEEEEeccccee-eEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcc---eeeeccccc
Confidence            348999999999999999999887744 445556 5566668999999999998 9999999998643   344467899


Q ss_pred             cceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceec
Q psy14511         81 SAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLN  160 (488)
Q Consensus        81 ~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (488)
                      +.|.+++|+|++++|++++.   |+.|++||+.+++.+..+                                       
T Consensus       140 ~~v~~~~~~~~~~~l~s~s~---d~~i~iwd~~~~~~~~~~---------------------------------------  177 (420)
T 3vl1_A          140 SEITKLKFFPSGEALISSSQ---DMQLKIWSVKDGSNPRTL---------------------------------------  177 (420)
T ss_dssp             SCEEEEEECTTSSEEEEEET---TSEEEEEETTTCCCCEEE---------------------------------------
T ss_pred             CccEEEEECCCCCEEEEEeC---CCeEEEEeCCCCcCceEE---------------------------------------
Confidence            99999999999988777776   999999999876532211                                       


Q ss_pred             cccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCC
Q psy14511        161 QSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYD  240 (488)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~  240 (488)
                                                                                                  .+ |
T Consensus       178 ----------------------------------------------------------------------------~~-h  180 (420)
T 3vl1_A          178 ----------------------------------------------------------------------------IG-H  180 (420)
T ss_dssp             ----------------------------------------------------------------------------EC-C
T ss_pred             ----------------------------------------------------------------------------cC-C
Confidence                                                                                        11 7


Q ss_pred             CCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecc---ccccEEEEEe-----------------------cC
Q psy14511        241 NAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRT---HMHQVIAMCW-----------------------NG  294 (488)
Q Consensus       241 ~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~---~~~~v~~~~~-----------------------~~  294 (488)
                      ...|.+++|+|+++.|+++ +.|+.|++||+++++.+..+..   +...+.++.+                       ++
T Consensus       181 ~~~v~~~~~~~~~~~l~s~-~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~  259 (420)
T 3vl1_A          181 RATVTDIAIIDRGRNVLSA-SLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYG  259 (420)
T ss_dssp             SSCEEEEEEETTTTEEEEE-ETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTT
T ss_pred             CCcEEEEEEcCCCCEEEEE-cCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCC
Confidence            7889999999999999998 9999999999999998888864   4555666554                       57


Q ss_pred             CEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCc-EEEEEe-cCeEEEEECCCCCC-Ccccce-----ee
Q psy14511        295 NLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGR-YLASGS-NNTVKIWDFRQLDA-KRPLGL-----IV  366 (488)
Q Consensus       295 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~-d~~i~iwd~~~~~~-~~~~~~-----~~  366 (488)
                      +++++++.||.|++||++++.........|...|.+++|+|+++ +|++++ |+.|++||+++.+. ...+..     ..
T Consensus       260 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~  339 (420)
T 3vl1_A          260 KYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPIN  339 (420)
T ss_dssp             EEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEE
T ss_pred             CEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCce
Confidence            79999999999999999987655555667889999999999998 999998 59999999998753 222221     12


Q ss_pred             eeecCCCCEEEEEccCCCCeEEEEeCCCc---------ceeEEEeeccccEEEEEEcCCCC---EEEEEeCCCcEEEEec
Q psy14511        367 PKLKREGRELVTSHGKQDCSLKMWEYPRL---------HLIEELKIHQERILSAVLSPDQT---CVAAASADETISIWNC  434 (488)
Q Consensus       367 ~~~~~~~~~l~~~~g~~~~~i~i~d~~~~---------~~~~~~~~~~~~v~~~~~s~~~~---~l~t~~~dg~v~iw~~  434 (488)
                      ..+.++++++++  ++.|+.|++|++.+.         .....+.+|...|.+++|+|+++   .|++++.+|.+.+|++
T Consensus       340 ~~~~~~~~~l~s--~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~  417 (420)
T 3vl1_A          340 NVYFAAGALFVS--SGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNL  417 (420)
T ss_dssp             EEEEETTEEEEE--ETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEES
T ss_pred             EEEeCCCCEEEE--ecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEec
Confidence            256678888888  789999999998763         22345667888999999999999   7888888999999998


Q ss_pred             CC
Q psy14511        435 FP  436 (488)
Q Consensus       435 ~~  436 (488)
                      ++
T Consensus       418 ~~  419 (420)
T 3vl1_A          418 SN  419 (420)
T ss_dssp             CC
T ss_pred             cC
Confidence            75

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=1.2e-40  Score=300.06  Aligned_cols=269  Identities=17%  Similarity=0.298  Sum_probs=225.6

Q ss_pred             cCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcC-CCcccccccc
Q psy14511          3 WNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAK-RPQVNNQCHL   80 (488)
Q Consensus         3 ~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~-~~~~~~~~h~   80 (488)
                      .||++||+|+.||+|+|||+.+++.+ ..+..|...|.+++|+|++++|++|+ |+.|++|++.+.+.. .....+.+|.
T Consensus        65 ~d~~~l~s~s~Dg~v~iWd~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~  143 (340)
T 1got_B           65 TDSRLLLSASQDGKLIIWDSYTTNKV-HAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHT  143 (340)
T ss_dssp             TTSSEEEEEETTTEEEEEETTTCCEE-EEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCS
T ss_pred             CCCCEEEEEeCCCcEEEEECCCCCcc-eEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCC
Confidence            48999999999999999999988754 56788999999999999999999998 999999999864322 2334567899


Q ss_pred             cceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceec
Q psy14511         81 SAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLN  160 (488)
Q Consensus        81 ~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (488)
                      +.|.++.|++++. +++++.   |++|++||+.+++....+..+...+..+.+.+                         
T Consensus       144 ~~v~~~~~~~~~~-l~s~s~---d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~-------------------------  194 (340)
T 1got_B          144 GYLSCCRFLDDNQ-IVTSSG---DTTCALWDIETGQQTTTFTGHTGDVMSLSLAP-------------------------  194 (340)
T ss_dssp             SCEEEEEEEETTE-EEEEET---TSCEEEEETTTTEEEEEECCCSSCEEEEEECT-------------------------
T ss_pred             ccEEEEEECCCCc-EEEEEC---CCcEEEEECCCCcEEEEEcCCCCceEEEEECC-------------------------
Confidence            9999999999874 666665   99999999999988877766544332222221                         


Q ss_pred             cccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCC
Q psy14511        161 QSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYD  240 (488)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~  240 (488)
                                                                    .+..+++++.|+.|++||+.++.....+..   |
T Consensus       195 ----------------------------------------------~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~---h  225 (340)
T 1got_B          195 ----------------------------------------------DTRLFVSGACDASAKLWDVREGMCRQTFTG---H  225 (340)
T ss_dssp             ----------------------------------------------TSSEEEEEETTSCEEEEETTTCSEEEEECC---C
T ss_pred             ----------------------------------------------CCCEEEEEeCCCcEEEEECCCCeeEEEEcC---C
Confidence                                                          124577788999999999999887666543   8


Q ss_pred             CCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecc--ccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCc
Q psy14511        241 NAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRT--HMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSD  316 (488)
Q Consensus       241 ~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~--~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~  316 (488)
                      ...|.+++|+|++++++++ +.|+.|++||++.++.+..+..  +...+.+++|  +++++++|+.|+.|++||+.+. .
T Consensus       226 ~~~v~~v~~~p~~~~l~s~-s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~-~  303 (340)
T 1got_B          226 ESDINAICFFPNGNAFATG-SDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA-D  303 (340)
T ss_dssp             SSCEEEEEECTTSSEEEEE-ETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTC-C
T ss_pred             cCCEEEEEEcCCCCEEEEE-cCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccC-c
Confidence            8899999999999999999 9999999999998887766643  3457999999  7899999999999999999875 4


Q ss_pred             cceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEE
Q psy14511        317 YPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWD  352 (488)
Q Consensus       317 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd  352 (488)
                      ....+.+|..+|.+++|+|++++|++++ |+.|++||
T Consensus       304 ~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd  340 (340)
T 1got_B          304 RAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             EeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence            6677889999999999999999999999 69999996

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=100.00  E-value=7e-41  Score=312.27  Aligned_cols=335  Identities=15%  Similarity=0.190  Sum_probs=257.4

Q ss_pred             CeEEEEEcccCcccceeecccCceEEEEEEccCCc-EEEEec-CCeEEEEec----cccCc------CCCc-cccc----
Q psy14511         15 GNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGR-YLASGS-NNTVKIWDF----RQLDA------KRPQ-VNNQ----   77 (488)
Q Consensus        15 g~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~-~las~~-d~~i~vwd~----~~~~~------~~~~-~~~~----   77 (488)
                      ..+.+|+.+..... .....|.+.|++++|+|+|+ +||+++ |+.|++||+    .+++.      ...+ ..+.    
T Consensus        25 ~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (425)
T 1r5m_A           25 SIDSSDDLDGFVKI-LKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSAS  103 (425)
T ss_dssp             ---------CCCEE-CEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC--
T ss_pred             cccccccchhhhhh-eeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCcccccccccccccccccccccc
Confidence            34567777654422 22345668999999999999 999998 999999999    76541      1111 1112    


Q ss_pred             --ccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccc
Q psy14511         78 --CHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDR  155 (488)
Q Consensus        78 --~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (488)
                        +|.+.|.+++|+|++++|++++.   |+.|++|| .+++....                                   
T Consensus       104 ~~~~~~~v~~~~~s~~~~~l~~~~~---dg~i~i~~-~~~~~~~~-----------------------------------  144 (425)
T 1r5m_A          104 SGKTTNQVTCLAWSHDGNSIVTGVE---NGELRLWN-KTGALLNV-----------------------------------  144 (425)
T ss_dssp             ----CBCEEEEEECTTSSEEEEEET---TSCEEEEE-TTSCEEEE-----------------------------------
T ss_pred             ccCCCCceEEEEEcCCCCEEEEEeC---CCeEEEEe-CCCCeeee-----------------------------------
Confidence              26789999999999988887776   99999999 34332211                                   


Q ss_pred             cceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEe
Q psy14511        156 KKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVE  235 (488)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~  235 (488)
                                                                                                      
T Consensus       145 --------------------------------------------------------------------------------  144 (425)
T 1r5m_A          145 --------------------------------------------------------------------------------  144 (425)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecccccc---------------EEEEEe-cCCEEEE
Q psy14511        236 YPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQ---------------VIAMCW-NGNLLSC  299 (488)
Q Consensus       236 ~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~---------------v~~~~~-~~~~l~~  299 (488)
                      +.. |...|.+++|+|++++++++ +.|+.|++||+.+++.+..+..+...               +.++.| .+..+++
T Consensus       145 ~~~-~~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (425)
T 1r5m_A          145 LNF-HRAPIVSVKWNKDGTHIISM-DVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVI  222 (425)
T ss_dssp             ECC-CCSCEEEEEECTTSSEEEEE-ETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEE
T ss_pred             ccC-CCccEEEEEECCCCCEEEEE-ecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEE
Confidence            112 77889999999999999999 89999999999999998888877766               788888 5678999


Q ss_pred             eecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCccccee-----eeeecCCC
Q psy14511        300 GTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLI-----VPKLKREG  373 (488)
Q Consensus       300 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~-----~~~~~~~~  373 (488)
                      ++.+|.|++||+++. .....+..|...|.+++|+|++++|++++ |+.|++||+++.+....+...     ...|+|++
T Consensus       223 ~~~~g~i~~~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~  301 (425)
T 1r5m_A          223 PGPKGAIFVYQITEK-TPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD  301 (425)
T ss_dssp             ECGGGCEEEEETTCS-SCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT
T ss_pred             EcCCCeEEEEEcCCC-ceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC
Confidence            999999999999986 56777888999999999999999999999 699999999987655444322     22899999


Q ss_pred             CEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCC---------------
Q psy14511        374 RELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRD---------------  438 (488)
Q Consensus       374 ~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~---------------  438 (488)
                       .+++  ++.|+.|++||+.+++.+..+..|...|.+++|+|++++|++++.||.|++||+.+++               
T Consensus       302 -~l~~--~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~  378 (425)
T 1r5m_A          302 -KVIS--CSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILN  378 (425)
T ss_dssp             -EEEE--EETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------
T ss_pred             -EEEE--EeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccC
Confidence             7777  7889999999999999999999999999999999999999999999999999999877               


Q ss_pred             -----cc-ccccccC--CcceEEeecCCCceEEEEeeecccccceeeEEEEe
Q psy14511        439 -----KK-RKARQVG--SGSSLEFAILKQPVSLTALLRSRAVEKQQHAIAYT  482 (488)
Q Consensus       439 -----~~-~~~~~~~--~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~  482 (488)
                           .. ....+..  .+.+++|+|+++.+.       .+..+..+.++..
T Consensus       379 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-------~~~~dg~i~iw~~  423 (425)
T 1r5m_A          379 PLPIPLYASYQSSQDNDYIFDLSWNCAGNKIS-------VAYSLQEGSVVAI  423 (425)
T ss_dssp             CEECCEEEEECCTTCCCCEEEEEECTTSSEEE-------EEESSSCCEEEEC
T ss_pred             cccchhhhhhcCcccCCceEEEEccCCCceEE-------EEecCceEEEEee
Confidence                 44 3344544  999999999998663       3445556666653

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=100.00  E-value=7.3e-41  Score=301.83  Aligned_cols=278  Identities=21%  Similarity=0.297  Sum_probs=218.4

Q ss_pred             ccCCceEEEeecCCeEEEEEcccCcccc--eeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccc
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTHSDYP--TAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQC   78 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~--~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~   78 (488)
                      +.||++||+|+.|++|+|||+.++....  ....+|...|.+++|+|+|++||+|+ |+.|++||+.++. ...+..+.+
T Consensus        25 sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~-~~~~~~~~~  103 (345)
T 3fm0_A           25 NPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDD-FECVTTLEG  103 (345)
T ss_dssp             CTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC--EEEEEEECC
T ss_pred             CCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCC-eEEEEEccC
Confidence            3489999999999999999998775332  23468999999999999999999999 9999999987643 234556788


Q ss_pred             cccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeee---eeeecCCCccccccccccccccceeEEEEEeeeeccc
Q psy14511         79 HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEK---CHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDR  155 (488)
Q Consensus        79 h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (488)
                      |...|.+++|+|++++|++++.   |++|++||+.++...   ..+..+..                             
T Consensus       104 h~~~v~~v~~sp~~~~l~s~s~---D~~v~iwd~~~~~~~~~~~~~~~h~~-----------------------------  151 (345)
T 3fm0_A          104 HENEVKSVAWAPSGNLLATCSR---DKSVWVWEVDEEDEYECVSVLNSHTQ-----------------------------  151 (345)
T ss_dssp             CSSCEEEEEECTTSSEEEEEET---TSCEEEEEECTTSCEEEEEEECCCCS-----------------------------
T ss_pred             CCCCceEEEEeCCCCEEEEEEC---CCeEEEEECCCCCCeEEEEEecCcCC-----------------------------
Confidence            9999999999999988777776   999999999776432   22222211                             


Q ss_pred             cceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC--CCcEEEEECCCeEEEEECCCCceEEE
Q psy14511        156 KKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG--YHDTLAVALDTSVYTWNTKTNKTQLL  233 (488)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~v~iw~~~~~~~~~~  233 (488)
                                                                  .+..+.|+  ...+++++.|+.|++|+..+++....
T Consensus       152 --------------------------------------------~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~  187 (345)
T 3fm0_A          152 --------------------------------------------DVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCC  187 (345)
T ss_dssp             --------------------------------------------CEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEE
T ss_pred             --------------------------------------------CeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEE
Confidence                                                        12223333  35688888999999999998876666


Q ss_pred             EecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCc---------------ceeeeeecc-ccccEEEEEe--cCC
Q psy14511        234 VEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE---------------ERLIQKLRT-HMHQVIAMCW--NGN  295 (488)
Q Consensus       234 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~---------------~~~~~~~~~-~~~~v~~~~~--~~~  295 (488)
                      ..+.+ |...|.+++|+|++++|+++ +.|+.|++|+...               .+++..+.+ |...|.+++|  ++.
T Consensus       188 ~~~~~-h~~~v~~l~~sp~g~~l~s~-s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~  265 (345)
T 3fm0_A          188 ATLEG-HESTVWSLAFDPSGQRLASC-SDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTG  265 (345)
T ss_dssp             EEECC-CSSCEEEEEECTTSSEEEEE-ETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTC
T ss_pred             EEecC-CCCceEEEEECCCCCEEEEE-eCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCC
Confidence            66666 99999999999999999999 9999999999632               133444444 8889999999  688


Q ss_pred             EEEEeecCCeEEEEECcCCCcc---c-----eeeecCCccEEEEEEccCC-cEEEEEe-cCeEEEEECCCCCC
Q psy14511        296 LLSCGTIGGNILHYDVRTHSDY---P-----TAITREGDVVCGLKWSPNG-RYLASGS-NNTVKIWDFRQLDA  358 (488)
Q Consensus       296 ~l~~~~~dg~i~i~d~~~~~~~---~-----~~~~~~~~~i~~~~~s~~~-~~l~~~~-d~~i~iwd~~~~~~  358 (488)
                      .+++++.|+.|++|+.......   .     ....+|...|++++|+|++ .+||+++ ||.|++|++.+.+.
T Consensus       266 ~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~  338 (345)
T 3fm0_A          266 ALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEG  338 (345)
T ss_dssp             CEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC---
T ss_pred             EEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCC
Confidence            9999999999999998754321   1     1235789999999999998 5999998 69999999987643

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=7.6e-42  Score=321.33  Aligned_cols=307  Identities=10%  Similarity=0.086  Sum_probs=221.6

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccc---eeecccCceEEEEEEccC------CcEEEEec-CCeEEEEeccccCcC---
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYP---TAITREGDVVCGLKWSPN------GRYLASGS-NNTVKIWDFRQLDAK---   70 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~---~~~~~h~~~V~~l~~sp~------g~~las~~-d~~i~vwd~~~~~~~---   70 (488)
                      ++++||+++.|++|+|||+.+++...   ..+.+|.+.|.+++|+|+      +.+||+++ |++|+|||+.++...   
T Consensus       172 ~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~  251 (524)
T 2j04_B          172 HLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHV  251 (524)
T ss_dssp             ----------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSE
T ss_pred             hhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccccc
Confidence            44556667789999999998776322   335678889999999997      57999998 999999999865422   


Q ss_pred             -----CCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEE
Q psy14511         71 -----RPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLS  145 (488)
Q Consensus        71 -----~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (488)
                           .+...+.+|...|++++|++++ .|++++.   ||+|++||+.++....                          
T Consensus       252 ~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~---DgtV~lWD~~~~~~~~--------------------------  301 (524)
T 2j04_B          252 FKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFK---NGFVAEFDLTDPEVPS--------------------------  301 (524)
T ss_dssp             EECCCSCSEEECCTTTCEEEEEESSSS-EEEEEET---TSEEEEEETTBCSSCS--------------------------
T ss_pred             ceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeC---CCEEEEEECCCCCCce--------------------------
Confidence                 2234567899999999999865 5555554   9999999997542100                          


Q ss_pred             EEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEEC
Q psy14511        146 FLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNT  225 (488)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~  225 (488)
                                                                                                      
T Consensus       302 --------------------------------------------------------------------------------  301 (524)
T 2j04_B          302 --------------------------------------------------------------------------------  301 (524)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCceEEEEecCCCCCCceEEE--EEcCCC-CeEEEEeCCCCcEEEEECCcceeeeeeccccc--cEEEEEe--cCCEEE
Q psy14511        226 KTNKTQLLVEYPTYDNAYISCV--AWKPRT-TDLAVTNTCTEYIDLWHEQEERLIQKLRTHMH--QVIAMCW--NGNLLS  298 (488)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~i~~~--~~~~~~-~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~--~v~~~~~--~~~~l~  298 (488)
                            ..  +.+ |...|.++  +|+|++ .+|+++ +.|++|++||+++++++..+.+|..  .+.+++|  +++.++
T Consensus       302 ------~~--~~~-H~~~V~sv~~~~s~~g~~~laS~-S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~  371 (524)
T 2j04_B          302 ------FY--DQV-HDSYILSVSTAYSDFEDTVVSTV-AVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYI  371 (524)
T ss_dssp             ------EE--EEC-SSSCEEEEEEECCTTSCCEEEEE-ETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEE
T ss_pred             ------EE--eec-ccccEEEEEEEcCCCCCeEEEEe-ccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEE
Confidence                  00  111 78889999  578887 778888 9999999999999887777776653  4777888  578999


Q ss_pred             EeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccc----------eeee
Q psy14511        299 CGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLG----------LIVP  367 (488)
Q Consensus       299 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~----------~~~~  367 (488)
                      +++.|+.|++||++++. ....+.+|...|++++|+|+|++|++|+ |++|++||+..... ....          ....
T Consensus       372 s~~~d~tv~lwd~~~~~-~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~-~~~~~~~~~~~~~~v~~v  449 (524)
T 2j04_B          372 YSDGASSLRAVPSRAAF-AVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRLL-HGIKNSSATQKSLRLWKW  449 (524)
T ss_dssp             EECSSSEEEEEETTCTT-CCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTT-TCC------CCCCEEEEC
T ss_pred             EeCCCCcEEEEECcccc-cceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhc-cccccCccceeeeEEEEe
Confidence            99999999999999864 5567888999999999999999999999 69999999865422 2111          1123


Q ss_pred             eecCCCCEEEEEccCCCCeEEEEeCC-CcceeEEEeeccccEEEEEEcCCCC---EEEEEeCCCcEEEEecCCC
Q psy14511        368 KLKREGRELVTSHGKQDCSLKMWEYP-RLHLIEELKIHQERILSAVLSPDQT---CVAAASADETISIWNCFPR  437 (488)
Q Consensus       368 ~~~~~~~~l~~~~g~~~~~i~i~d~~-~~~~~~~~~~~~~~v~~~~~s~~~~---~l~t~~~dg~v~iw~~~~~  437 (488)
                      +|+|+++.+..   ..+  +.+|+.. ++..+.++.+|...|++++|+|+++   .+|+|+.||.|+||++.-.
T Consensus       450 ~~sp~g~~~~~---~~~--~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~  518 (524)
T 2j04_B          450 DYSIKDDKYRI---DSS--YEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSLE  518 (524)
T ss_dssp             BCCSSSCEEEE---CCC--CCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSCC
T ss_pred             ccCCCCCeEEc---cCC--ceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEcccc
Confidence            88999885543   222  3344332 4677888999999999999999964   9999999999999998643

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=100.00  E-value=3.4e-40  Score=298.25  Aligned_cols=273  Identities=18%  Similarity=0.281  Sum_probs=226.9

Q ss_pred             ccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCc---CCCccccc
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDA---KRPQVNNQ   77 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~---~~~~~~~~   77 (488)
                      +.||++||+|+.||+|+|||..+++.. ..+..|...|.+++|+|+|++||+++ |+.+++|++.....   ......+.
T Consensus        73 s~d~~~l~s~s~Dg~v~vWd~~~~~~~-~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~  151 (354)
T 2pbi_B           73 CKDKRRIVSSSQDGKVIVWDSFTTNKE-HAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVA  151 (354)
T ss_dssp             CTTSSEEEEEETTSEEEEEETTTCCEE-EEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEE
T ss_pred             CCCCCEEEEEeCCCeEEEEECCCCCcc-eEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeee
Confidence            348999999999999999999887744 56778889999999999999999999 99999999865321   12334466


Q ss_pred             ccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccc
Q psy14511         78 CHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKK  157 (488)
Q Consensus        78 ~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (488)
                      +|...|.+++|+|++..+++++.   |++|++||+++++.+..+..+...+..+.+.+..                    
T Consensus       152 ~h~~~v~~~~~~~~~~~l~t~s~---D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~--------------------  208 (354)
T 2pbi_B          152 MHTNYLSACSFTNSDMQILTASG---DGTCALWDVESGQLLQSFHGHGADVLCLDLAPSE--------------------  208 (354)
T ss_dssp             ECSSCEEEEEECSSSSEEEEEET---TSEEEEEETTTCCEEEEEECCSSCEEEEEECCCS--------------------
T ss_pred             ccCCcEEEEEEeCCCCEEEEEeC---CCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCC--------------------
Confidence            79999999999999988888776   9999999999999888777664433222222111                    


Q ss_pred             eeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecC
Q psy14511        158 VLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYP  237 (488)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~  237 (488)
                                                                       .++.+++++.|+.|++||+++++....+.. 
T Consensus       209 -------------------------------------------------~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~-  238 (354)
T 2pbi_B          209 -------------------------------------------------TGNTFVSGGCDKKAMVWDMRSGQCVQAFET-  238 (354)
T ss_dssp             -------------------------------------------------SCCEEEEEETTSCEEEEETTTCCEEEEECC-
T ss_pred             -------------------------------------------------CCCEEEEEeCCCeEEEEECCCCcEEEEecC-
Confidence                                                             124678888999999999999987766543 


Q ss_pred             CCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccc--cccEEEEEe--cCCEEEEeecCCeEEEEECcC
Q psy14511        238 TYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTH--MHQVIAMCW--NGNLLSCGTIGGNILHYDVRT  313 (488)
Q Consensus       238 ~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~--~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~  313 (488)
                        |...|++++|+|+++.++++ +.|+.|++||++.++.+..+..+  ...+.+++|  +++++++++.|+.|++||+.+
T Consensus       239 --h~~~v~~v~~~p~~~~l~s~-s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~  315 (354)
T 2pbi_B          239 --HESDVNSVRYYPSGDAFASG-SDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLK  315 (354)
T ss_dssp             --CSSCEEEEEECTTSSEEEEE-ETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred             --CCCCeEEEEEeCCCCEEEEE-eCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCC
Confidence              88999999999999999999 99999999999988777666543  347888888  789999999999999999987


Q ss_pred             CCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEE
Q psy14511        314 HSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWD  352 (488)
Q Consensus       314 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd  352 (488)
                      +. ....+.+|...|.+++|+|+|++|++++ |+.|++|+
T Consensus       316 ~~-~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~  354 (354)
T 2pbi_B          316 GS-RVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA  354 (354)
T ss_dssp             CS-EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred             Cc-eEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence            64 5677889999999999999999999999 69999995

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=100.00  E-value=9.8e-40  Score=305.87  Aligned_cols=316  Identities=19%  Similarity=0.304  Sum_probs=262.9

Q ss_pred             ceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceE
Q psy14511         29 PTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTV  107 (488)
Q Consensus        29 ~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i  107 (488)
                      ...+.+|.+.|.. +++++|++|++|+ |+.|++||+.+++   .+..+.+|.+.|.+++|+  ++.+++++.   |++|
T Consensus       111 ~~~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~---~~~~~~~h~~~v~~~~~~--~~~l~s~~~---dg~i  181 (445)
T 2ovr_B          111 PKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGK---CLRTLVGHTGGVWSSQMR--DNIIISGST---DRTL  181 (445)
T ss_dssp             CEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCC---EEEECCCCSSCEEEEEEE--TTEEEEEET---TSCE
T ss_pred             eEEecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCc---EEEEEcCCCCCEEEEEec--CCEEEEEeC---CCeE
Confidence            3567899887533 3556799999998 9999999998754   455677899999999998  446666665   9999


Q ss_pred             EEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCc
Q psy14511        108 RLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPE  187 (488)
Q Consensus       108 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (488)
                      ++||+.+++....+..+...                                                            
T Consensus       182 ~vwd~~~~~~~~~~~~h~~~------------------------------------------------------------  201 (445)
T 2ovr_B          182 KVWNAETGECIHTLYGHTST------------------------------------------------------------  201 (445)
T ss_dssp             EEEETTTTEEEEEECCCSSC------------------------------------------------------------
T ss_pred             EEEECCcCcEEEEECCCCCc------------------------------------------------------------
Confidence            99999999887766554221                                                            


Q ss_pred             eeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEE
Q psy14511        188 RILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYID  267 (488)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~  267 (488)
                                   +.++.++++.+++++.|+.|++||+.+++....+..   |...+.++++  +++.++++ +.|+.|+
T Consensus       202 -------------v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~---~~~~v~~~~~--~~~~l~~~-~~dg~i~  262 (445)
T 2ovr_B          202 -------------VRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMG---HVAAVRCVQY--DGRRVVSG-AYDFMVK  262 (445)
T ss_dssp             -------------EEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEEC---CSSCEEEEEE--CSSCEEEE-ETTSCEE
T ss_pred             -------------EEEEEecCCEEEEEeCCCEEEEEECCCCcEEEEEcC---CcccEEEEEE--CCCEEEEE-cCCCEEE
Confidence                         223444567789999999999999999987766654   8889999999  67889888 8999999


Q ss_pred             EEECCcceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cC
Q psy14511        268 LWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NN  346 (488)
Q Consensus       268 i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~  346 (488)
                      +||+++++.+..+.+|...+.++.++++.+++++.||.|++||++++ .....+..|...+.++.+  +++++++++ |+
T Consensus       263 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg  339 (445)
T 2ovr_B          263 VWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETG-NCIHTLTGHQSLTSGMEL--KDNILVSGNADS  339 (445)
T ss_dssp             EEEGGGTEEEEEECCCSSCEEEEEECSSEEEEEETTSCEEEEETTTC-CEEEEECCCCSCEEEEEE--ETTEEEEEETTS
T ss_pred             EEECCCCcEeEEecCCCCceEEEEECCCEEEEEeCCCeEEEEECCCC-CEEEEEcCCcccEEEEEE--eCCEEEEEeCCC
Confidence            99999999999999999999999999999999999999999999986 466778889988888877  467899888 69


Q ss_pred             eEEEEECCCCCCCcccce------eeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEE-----eeccccEEEEEEcC
Q psy14511        347 TVKIWDFRQLDAKRPLGL------IVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEEL-----KIHQERILSAVLSP  415 (488)
Q Consensus       347 ~i~iwd~~~~~~~~~~~~------~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~-----~~~~~~v~~~~~s~  415 (488)
                      .|++||+++++....+..      .+.++..+++++++  |+.||.|++||+.+++.+..+     .+|.+.|++++|+|
T Consensus       340 ~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s--~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  417 (445)
T 2ovr_B          340 TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVIT--SSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASN  417 (445)
T ss_dssp             CEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEE--EETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECS
T ss_pred             eEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEE--EeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecC
Confidence            999999988765444332      13355557889888  789999999999999999888     46888999999999


Q ss_pred             CCCEEEEEeCCCc----EEEEecCCC
Q psy14511        416 DQTCVAAASADET----ISIWNCFPR  437 (488)
Q Consensus       416 ~~~~l~t~~~dg~----v~iw~~~~~  437 (488)
                      ++.+||+++.||.    |.+||+...
T Consensus       418 ~~~~la~~~~dg~~~~~l~v~df~~~  443 (445)
T 2ovr_B          418 TKLVCAVGSRNGTEETKLLVLDFDVD  443 (445)
T ss_dssp             SEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred             CEEEEEEcccCCCCccEEEEEECCCC
Confidence            9999999999998    999999764

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.1e-40  Score=300.45  Aligned_cols=285  Identities=16%  Similarity=0.238  Sum_probs=242.2

Q ss_pred             eeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEE
Q psy14511         30 TAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVR  108 (488)
Q Consensus        30 ~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~  108 (488)
                      ..+.+|.+.|++++|+|++++|++++ |+.|++||+.+++   .+..+.+|...|.+++|+|+++++++++.   |+.|+
T Consensus        26 ~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~---~~~~~~~h~~~v~~~~~~~~~~~l~s~~~---dg~i~   99 (369)
T 3zwl_B           26 IKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGE---RLGTLDGHTGTIWSIDVDCFTKYCVTGSA---DYSIK   99 (369)
T ss_dssp             EEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCC---EEEEECCCSSCEEEEEECTTSSEEEEEET---TTEEE
T ss_pred             EEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCch---hhhhhhhcCCcEEEEEEcCCCCEEEEEeC---CCeEE
Confidence            45789999999999999999999998 9999999998743   45567789999999999999998887776   99999


Q ss_pred             EEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCce
Q psy14511        109 LWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPER  188 (488)
Q Consensus       109 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (488)
                      +||+.+++.+..+                                                                   
T Consensus       100 iwd~~~~~~~~~~-------------------------------------------------------------------  112 (369)
T 3zwl_B          100 LWDVSNGQCVATW-------------------------------------------------------------------  112 (369)
T ss_dssp             EEETTTCCEEEEE-------------------------------------------------------------------
T ss_pred             EEECCCCcEEEEe-------------------------------------------------------------------
Confidence            9999876643221                                                                   


Q ss_pred             eecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCC-----
Q psy14511        189 ILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCT-----  263 (488)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~-----  263 (488)
                                                                    .    +...+.+++|+|++++++++ +.+     
T Consensus       113 ----------------------------------------------~----~~~~v~~~~~~~~~~~l~~~-~~~~~~~~  141 (369)
T 3zwl_B          113 ----------------------------------------------K----SPVPVKRVEFSPCGNYFLAI-LDNVMKNP  141 (369)
T ss_dssp             ----------------------------------------------E----CSSCEEEEEECTTSSEEEEE-ECCBTTBC
T ss_pred             ----------------------------------------------e----cCCCeEEEEEccCCCEEEEe-cCCccCCC
Confidence                                                          1    45579999999999999998 777     


Q ss_pred             CcEEEEECCcce-----------eeeeeccccc--cEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccE
Q psy14511        264 EYIDLWHEQEER-----------LIQKLRTHMH--QVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVV  328 (488)
Q Consensus       264 ~~i~i~d~~~~~-----------~~~~~~~~~~--~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i  328 (488)
                      +.|++||+....           ....+..|..  .+.+++|  +++.+++++.||.|++||+++.......+..|...|
T Consensus       142 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v  221 (369)
T 3zwl_B          142 GSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSI  221 (369)
T ss_dssp             CEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCE
T ss_pred             CEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCce
Confidence            999999987653           2334445555  8999999  689999999999999999998656788888999999


Q ss_pred             EEEEEccCCcEEEEEe-cCeEEEEECCCCCCCccccee----eeeecCCCCEEEEEccCCCC--------------eEEE
Q psy14511        329 CGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLI----VPKLKREGRELVTSHGKQDC--------------SLKM  389 (488)
Q Consensus       329 ~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~----~~~~~~~~~~l~~~~g~~~~--------------~i~i  389 (488)
                      .+++|+|++++|++++ |+.|++||+++.+....+...    ...|+|+++++++  ++.++              .+++
T Consensus       222 ~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~i~~  299 (369)
T 3zwl_B          222 SDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIIL--GGGQEAKDVTTTSANEGKFEARF  299 (369)
T ss_dssp             EEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEE--EECCC-------------CEEEE
T ss_pred             eEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCCCCceeEEecCCCceEEE--eecCCCceEEEEecCCCcceeEE
Confidence            9999999999999998 699999999987554443321    2299999999999  45555              8999


Q ss_pred             EeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcc
Q psy14511        390 WEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKK  440 (488)
Q Consensus       390 ~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~  440 (488)
                      ||..+++.+..+.+|...|++++|+|++++|++++.||.|++|++.++...
T Consensus       300 ~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~  350 (369)
T 3zwl_B          300 YHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKSYFD  350 (369)
T ss_dssp             EETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHHHHT
T ss_pred             EecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECccccch
Confidence            999999999999999999999999999999999999999999999876543

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=100.00  E-value=4.4e-40  Score=302.20  Aligned_cols=287  Identities=15%  Similarity=0.175  Sum_probs=227.8

Q ss_pred             ceeecccCceEEEEEEccCC-cEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEec-CCCeEEeeeCCcccc
Q psy14511         29 PTAITREGDVVCGLKWSPNG-RYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCP-WEPTLLATGGGICDQ  105 (488)
Q Consensus        29 ~~~~~~h~~~V~~l~~sp~g-~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~-~~~~l~~~~~~~~d~  105 (488)
                      ...+.+|...|++++|+|++ ++||+|+ |+.|+|||+.+++.. ......+|...|.+++|+| +++++++++.   |+
T Consensus        66 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~---d~  141 (383)
T 3ei3_B           66 HRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKT-SFIQGMGPGDAITGMKFNQFNTNQLFVSSI---RG  141 (383)
T ss_dssp             EEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCE-EEECCCSTTCBEEEEEEETTEEEEEEEEET---TT
T ss_pred             EEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccc-eeeecCCcCCceeEEEeCCCCCCEEEEEeC---CC
Confidence            34568999999999999999 9999998 999999999875433 2223357999999999999 5666666655   99


Q ss_pred             eEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCC
Q psy14511        106 TVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAK  185 (488)
Q Consensus       106 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (488)
                      .|++||+.+.. ...+..                                                              
T Consensus       142 ~i~iwd~~~~~-~~~~~~--------------------------------------------------------------  158 (383)
T 3ei3_B          142 ATTLRDFSGSV-IQVFAK--------------------------------------------------------------  158 (383)
T ss_dssp             EEEEEETTSCE-EEEEEC--------------------------------------------------------------
T ss_pred             EEEEEECCCCc-eEEEec--------------------------------------------------------------
Confidence            99999987422 111111                                                              


Q ss_pred             CceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCc
Q psy14511        186 PERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEY  265 (488)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~  265 (488)
                                                                        ... +...+.+++|+|+++.++++ +.|+.
T Consensus       159 --------------------------------------------------~~~-~~~~v~~~~~~~~~~~l~~~-~~d~~  186 (383)
T 3ei3_B          159 --------------------------------------------------TDS-WDYWYCCVDVSVSRQMLATG-DSTGR  186 (383)
T ss_dssp             --------------------------------------------------CCC-SSCCEEEEEEETTTTEEEEE-ETTSE
T ss_pred             --------------------------------------------------cCC-CCCCeEEEEECCCCCEEEEE-CCCCC
Confidence                                                              011 55789999999999999999 99999


Q ss_pred             EEEEECCcceeeeeeccccccEEEEEe--cCC-EEEEeecCCeEEEEECcCCCc--cceeeecCCccEEEEEEcc-CCcE
Q psy14511        266 IDLWHEQEERLIQKLRTHMHQVIAMCW--NGN-LLSCGTIGGNILHYDVRTHSD--YPTAITREGDVVCGLKWSP-NGRY  339 (488)
Q Consensus       266 i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~-~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~i~~~~~s~-~~~~  339 (488)
                      |++||+ .++.+..+..|...|.+++|  +++ ++++++.|+.|++||+++...  .......|...|.+++|+| ++++
T Consensus       187 i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~  265 (383)
T 3ei3_B          187 LLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTK  265 (383)
T ss_dssp             EEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCE
T ss_pred             EEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCE
Confidence            999999 46788889999999999999  456 899999999999999987431  2222337899999999999 9999


Q ss_pred             EEEEe-cCeEEEEECCCCCCCccccee-----------eeeecCCCCEEEEE-------ccCCCCeEEEEeCCCcceeEE
Q psy14511        340 LASGS-NNTVKIWDFRQLDAKRPLGLI-----------VPKLKREGRELVTS-------HGKQDCSLKMWEYPRLHLIEE  400 (488)
Q Consensus       340 l~~~~-d~~i~iwd~~~~~~~~~~~~~-----------~~~~~~~~~~l~~~-------~g~~~~~i~i~d~~~~~~~~~  400 (488)
                      |++++ |+.|++||+++.+....+...           ...|+|++..++++       +++.|+.|++||+.+++++..
T Consensus       266 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~s~s~d~~i~iwd~~~~~~~~~  345 (383)
T 3ei3_B          266 LLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQLLLNDKRTIDIYDANSGGLVHQ  345 (383)
T ss_dssp             EEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTTCTTCCCCEEEEETTTCCEEEE
T ss_pred             EEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCcccccCCCCeEEEEecCCCceeee
Confidence            99999 699999999987654433211           11444444444432       367899999999999999999


Q ss_pred             Eee--ccccEEEEEEcCCCCEEEEEeCCCcEEEEecCC
Q psy14511        401 LKI--HQERILSAVLSPDQTCVAAASADETISIWNCFP  436 (488)
Q Consensus       401 ~~~--~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~  436 (488)
                      +.+  |...+..++|+|++++|++++ ||.|++||+++
T Consensus       346 l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~  382 (383)
T 3ei3_B          346 LRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRED  382 (383)
T ss_dssp             ECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred             ecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence            987  456788889999999999997 99999999875

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=100.00  E-value=7.3e-40  Score=293.39  Aligned_cols=289  Identities=17%  Similarity=0.290  Sum_probs=211.3

Q ss_pred             ceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccc-cc-cccceeEEEEecCCCeEEeeeCCcccc
Q psy14511         29 PTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNN-QC-HLSAVKAIAWCPWEPTLLATGGGICDQ  105 (488)
Q Consensus        29 ~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~-~~-h~~~v~~l~~~~~~~~l~~~~~~~~d~  105 (488)
                      ...+.+|.+.|.+++|+|+  +||+|+ |+.|++||+.++.. .....+ .+ |...|.+++|+|++++|++++.   |+
T Consensus         7 ~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~-~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~---D~   80 (330)
T 2hes_X            7 IKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDF-TLIDVLDETAHKKAIRSVAWRPHTSLLAAGSF---DS   80 (330)
T ss_dssp             EEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCC-EEEEEECTTCCCSCEEEEEECTTSSEEEEEET---TS
T ss_pred             ceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCe-EEEEEEecCCccCCEEEEEECCCCCEEEEEeC---CC
Confidence            3567899999999999998  999998 99999999986431 122223 33 9999999999999987777766   99


Q ss_pred             eEEEEecCCCe-------eeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccc
Q psy14511        106 TVRLWNSMNGK-------EKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKL  178 (488)
Q Consensus       106 ~i~vwd~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (488)
                      +|++||+....       ....+..+..                                                    
T Consensus        81 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~----------------------------------------------------  108 (330)
T 2hes_X           81 TVSIWAKEESADRTFEMDLLAIIEGHEN----------------------------------------------------  108 (330)
T ss_dssp             CEEEEEC-------CCCEEEEEEC--------------------------------------------------------
T ss_pred             cEEEEEcccCcCccccceeEEEEcCCCC----------------------------------------------------
Confidence            99999985422       1222222211                                                    


Q ss_pred             cccccCCCceeecCCCccccceeeeeeeCC--CcEEEEECCCeEEEEECCCC-c-eEEEEecCCCCCCceEEEEEcCCCC
Q psy14511        179 PRKVKAKPERILEAPSIINDFYTSGLDWGY--HDTLAVALDTSVYTWNTKTN-K-TQLLVEYPTYDNAYISCVAWKPRTT  254 (488)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~v~iw~~~~~-~-~~~~~~~~~~~~~~i~~~~~~~~~~  254 (488)
                                           .+.++.|++  ..+++++.|+.|++||+... . ......+.+ |...|.+++|+|+++
T Consensus       109 ---------------------~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~  166 (330)
T 2hes_X          109 ---------------------EVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQE-HSQDVKHVIWHPSEA  166 (330)
T ss_dssp             ---------------------CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECC-CSSCEEEEEECSSSS
T ss_pred             ---------------------cEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEecc-CCCceEEEEECCCCC
Confidence                                 233344443  46778889999999999532 2 222333444 889999999999999


Q ss_pred             eEEEEeCCCCcEEEEECCcc--eeeeeeccccccEEEEEec----CCEEEEeecCCeEEEEECcCCC-------ccceee
Q psy14511        255 DLAVTNTCTEYIDLWHEQEE--RLIQKLRTHMHQVIAMCWN----GNLLSCGTIGGNILHYDVRTHS-------DYPTAI  321 (488)
Q Consensus       255 ~l~~~~~~~~~i~i~d~~~~--~~~~~~~~~~~~v~~~~~~----~~~l~~~~~dg~i~i~d~~~~~-------~~~~~~  321 (488)
                      +|+++ +.|+.|++||...+  +++..+.+|...|.+++|+    +..+++++.|+.|++||++...       .....+
T Consensus       167 ~l~s~-s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~  245 (330)
T 2hes_X          167 LLASS-SYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAIL  245 (330)
T ss_dssp             EEEEE-ETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEEC
T ss_pred             EEEEE-cCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeec
Confidence            99999 99999999998765  6788899999999999993    4689999999999999987542       122233


Q ss_pred             ec-CCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCccee-
Q psy14511        322 TR-EGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLI-  398 (488)
Q Consensus       322 ~~-~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~-  398 (488)
                      .. |...|.+++|++++ +|++++ |+.|++||..+++                                     .+.+ 
T Consensus       246 ~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~-------------------------------------~~~~~  287 (330)
T 2hes_X          246 PDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGE-------------------------------------WKVFA  287 (330)
T ss_dssp             CSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTE-------------------------------------EEEEE
T ss_pred             ccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCc-------------------------------------eEEEe
Confidence            33 88899999999766 666666 6888888764320                                     0112 


Q ss_pred             EEEeeccc-cEEEEEEcC--CCCEEEEEeCCCcEEEEecCC
Q psy14511        399 EELKIHQE-RILSAVLSP--DQTCVAAASADETISIWNCFP  436 (488)
Q Consensus       399 ~~~~~~~~-~v~~~~~s~--~~~~l~t~~~dg~v~iw~~~~  436 (488)
                      ..+.+|.. .|++++|+|  ++++||+++.||.|++|++++
T Consensus       288 ~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~  328 (330)
T 2hes_X          288 KRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK  328 (330)
T ss_dssp             EESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred             ccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence            22356776 899999999  789999999999999999865

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=100.00  E-value=5.9e-40  Score=296.09  Aligned_cols=318  Identities=14%  Similarity=0.202  Sum_probs=257.3

Q ss_pred             cCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecC
Q psy14511         35 EGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSM  113 (488)
Q Consensus        35 h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~  113 (488)
                      |.++|.+++|+|||++++++. ++.+.+|+....  . ......+|...|.+++|+|+++++++ ++   |+.|++||+.
T Consensus         8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~h~~~v~~~~~~~~~~~l~~-~~---dg~i~iw~~~   80 (337)
T 1gxr_A            8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRH--A-RQINTLNHGEVVCAVTISNPTRHVYT-GG---KGCVKVWDIS   80 (337)
T ss_dssp             EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSE--E-EEEEEECCSSCCCEEEECSSSSEEEE-EC---BSEEEEEETT
T ss_pred             cCCceeEEEECCCCCEEEeecCCCcEeccccCCc--c-ccceeccCCCceEEEEEecCCcEEEE-cC---CCeEEEEECC
Confidence            567899999999999999887 666666654432  1 22223469999999999999976554 54   9999999997


Q ss_pred             CCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCC
Q psy14511        114 NGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAP  193 (488)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (488)
                      +++....+                                                                        
T Consensus        81 ~~~~~~~~------------------------------------------------------------------------   88 (337)
T 1gxr_A           81 HPGNKSPV------------------------------------------------------------------------   88 (337)
T ss_dssp             STTCCSCS------------------------------------------------------------------------
T ss_pred             CCCceeee------------------------------------------------------------------------
Confidence            65421110                                                                        


Q ss_pred             CccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCc
Q psy14511        194 SIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE  273 (488)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~  273 (488)
                                                            ......+ +...+.+++|+|++++++++ +.++.|++||+.+
T Consensus        89 --------------------------------------~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~d~~i~~~d~~~  128 (337)
T 1gxr_A           89 --------------------------------------SQLDCLN-RDNYIRSCKLLPDGCTLIVG-GEASTLSIWDLAA  128 (337)
T ss_dssp             --------------------------------------EEEECSC-TTSBEEEEEECTTSSEEEEE-ESSSEEEEEECCC
T ss_pred             --------------------------------------ecccccC-CCCcEEEEEEcCCCCEEEEE-cCCCcEEEEECCC
Confidence                                                  1111112 77889999999999999999 8999999999998


Q ss_pred             ce--eeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeE
Q psy14511        274 ER--LIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTV  348 (488)
Q Consensus       274 ~~--~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i  348 (488)
                      ++  ....+..|...+.+++|  +++.+++++.||.|++||++++ .....+..|...+.+++|+|++++|++++ |+.|
T Consensus       129 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i  207 (337)
T 1gxr_A          129 PTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ-TLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTV  207 (337)
T ss_dssp             C--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred             CCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC-ceeeeeecccCceEEEEECCCCCEEEEEecCCcE
Confidence            76  56677889999999999  6889999999999999999885 46677888999999999999999999998 6999


Q ss_pred             EEEECCCCCCCccccee----eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEe
Q psy14511        349 KIWDFRQLDAKRPLGLI----VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAAS  424 (488)
Q Consensus       349 ~iwd~~~~~~~~~~~~~----~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~  424 (488)
                      ++||+++.+....+...    ..+|+|+++.+++  ++.++.|++||+.+++. ..+..|...|.+++|+|++++|++++
T Consensus       208 ~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~--~~~~~~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~  284 (337)
T 1gxr_A          208 RSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAV--GMESSNVEVLHVNKPDK-YQLHLHESCVLSLKFAYCGKWFVSTG  284 (337)
T ss_dssp             EEEETTTTEEEEEEECSSCEEEEEECTTSSEEEE--EETTSCEEEEETTSSCE-EEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred             EEEECCCCceEeeecCCCceEEEEECCCCCEEEE--EcCCCcEEEEECCCCCe-EEEcCCccceeEEEECCCCCEEEEec
Confidence            99999987544333211    2289999999999  78899999999998775 46778999999999999999999999


Q ss_pred             CCCcEEEEecCCCCccccccccCCcceEEeecCCCceEEEEeeecccccceeeEEEEe
Q psy14511        425 ADETISIWNCFPRDKKRKARQVGSGSSLEFAILKQPVSLTALLRSRAVEKQQHAIAYT  482 (488)
Q Consensus       425 ~dg~v~iw~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~  482 (488)
                      .||.|++||+.+++......+...+.+++|+|+++.+.       .+..+..+.++..
T Consensus       285 ~dg~i~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-------~~~~dg~i~iw~~  335 (337)
T 1gxr_A          285 KDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIV-------TGSGDKKATVYEV  335 (337)
T ss_dssp             TTSEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEE-------EEETTSCEEEEEE
T ss_pred             CCCcEEEEECCCCeEEEEecCCCcEEEEEECCCCCEEE-------EecCCCeEEEEEE
Confidence            99999999999999887778899999999999998763       3345555555543

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=100.00  E-value=8.6e-41  Score=310.74  Aligned_cols=322  Identities=13%  Similarity=0.259  Sum_probs=256.3

Q ss_pred             ceEEEEEEccCCc-EEEEe----------c-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCccc
Q psy14511         37 DVVCGLKWSPNGR-YLASG----------S-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICD  104 (488)
Q Consensus        37 ~~V~~l~~sp~g~-~las~----------~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d  104 (488)
                      ..|.+++|+|+|+ +||++          + |+.|+|||+.++...+.+..+ .|...|.+++|+|++++|++++.   |
T Consensus        13 ~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~---d   88 (416)
T 2pm9_A           13 SRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNNKIIAGALD---N   88 (416)
T ss_dssp             EESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSSSCEEEEES---S
T ss_pred             hhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCCCeEEEEcc---C
Confidence            4688999999997 99998          6 899999999876544344333 58899999999999998877776   9


Q ss_pred             ceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccC
Q psy14511        105 QTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKA  184 (488)
Q Consensus       105 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (488)
                      +.|++||+.+....                                                                  
T Consensus        89 g~v~vw~~~~~~~~------------------------------------------------------------------  102 (416)
T 2pm9_A           89 GSLELYSTNEANNA------------------------------------------------------------------  102 (416)
T ss_dssp             SCEEEECCSSTTSC------------------------------------------------------------------
T ss_pred             CeEEEeeccccccc------------------------------------------------------------------
Confidence            99999998752100                                                                  


Q ss_pred             CCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCC-CCeEEEEeCCC
Q psy14511        185 KPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPR-TTDLAVTNTCT  263 (488)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~~~  263 (488)
                                                                 .+  ....+.+ |...|.+++|+|+ +++++++ +.|
T Consensus       103 -------------------------------------------~~--~~~~~~~-h~~~v~~~~~~~~~~~~l~s~-~~d  135 (416)
T 2pm9_A          103 -------------------------------------------IN--SMARFSN-HSSSVKTVKFNAKQDNVLASG-GNN  135 (416)
T ss_dssp             -------------------------------------------CC--EEEECCC-SSSCCCEEEECSSSTTBEEEE-CSS
T ss_pred             -------------------------------------------cc--chhhccC-CccceEEEEEcCCCCCEEEEE-cCC
Confidence                                                       00  1112222 7889999999998 7888888 999


Q ss_pred             CcEEEEECCcce------eeee---eccccccEEEEEe--c-CCEEEEeecCCeEEEEECcCCCccceeeecC------C
Q psy14511        264 EYIDLWHEQEER------LIQK---LRTHMHQVIAMCW--N-GNLLSCGTIGGNILHYDVRTHSDYPTAITRE------G  325 (488)
Q Consensus       264 ~~i~i~d~~~~~------~~~~---~~~~~~~v~~~~~--~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~------~  325 (488)
                      +.|++||+.+++      ....   ...|...+.+++|  + +.++++++.||.|++||+++.+ ....+..+      .
T Consensus       136 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~-~~~~~~~~~~~~~~~  214 (416)
T 2pm9_A          136 GEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKK-EVIHLSYTSPNSGIK  214 (416)
T ss_dssp             SCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTE-EEEEECCCCCSSCCC
T ss_pred             CeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCC-cceEEeccccccccC
Confidence            999999998876      3333   3678899999999  4 6899999999999999999864 45555554      7


Q ss_pred             ccEEEEEEccCC-cEEEEEe-cC---eEEEEECCCCC-CCcccc-ee-----eeeecC-CCCEEEEEccCCCCeEEEEeC
Q psy14511        326 DVVCGLKWSPNG-RYLASGS-NN---TVKIWDFRQLD-AKRPLG-LI-----VPKLKR-EGRELVTSHGKQDCSLKMWEY  392 (488)
Q Consensus       326 ~~i~~~~~s~~~-~~l~~~~-d~---~i~iwd~~~~~-~~~~~~-~~-----~~~~~~-~~~~l~~~~g~~~~~i~i~d~  392 (488)
                      ..|.+++|+|++ .++++++ ++   .|++||+++.. ....+. ..     ..+|+| +++++++  ++.|+.|++||+
T Consensus       215 ~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s--~~~dg~v~~wd~  292 (416)
T 2pm9_A          215 QQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLS--SGRDNTVLLWNP  292 (416)
T ss_dssp             CCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEE--EESSSEEEEECS
T ss_pred             CceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEE--EeCCCCEEEeeC
Confidence            889999999997 6888888 47   99999999863 333332 11     228999 8999999  788999999999


Q ss_pred             CCcceeEEEeeccccEEEEEEcCCC-CEEEEEeCCCcEEEEecCCCCccccc----------------------------
Q psy14511        393 PRLHLIEELKIHQERILSAVLSPDQ-TCVAAASADETISIWNCFPRDKKRKA----------------------------  443 (488)
Q Consensus       393 ~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~t~~~dg~v~iw~~~~~~~~~~~----------------------------  443 (488)
                      .+++++..+.+|...|++++|+|++ ++|++++.||.|++|++.+.+.....                            
T Consensus       293 ~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  372 (416)
T 2pm9_A          293 ESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPS  372 (416)
T ss_dssp             SSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCC
T ss_pred             CCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccc
Confidence            9999999999999999999999999 89999999999999999877643211                            


Q ss_pred             --------cccCCcceEEeecCCCceEEEEeeecccccceeeEEEEeecc
Q psy14511        444 --------RQVGSGSSLEFAILKQPVSLTALLRSRAVEKQQHAIAYTVFG  485 (488)
Q Consensus       444 --------~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g  485 (488)
                              .+..++.+++|+|+|+.+       +.+..+..+.||..+++
T Consensus       373 ~~~~~~~~~~~~~~~~~~~s~dg~~l-------a~~~~d~~v~~w~~~~~  415 (416)
T 2pm9_A          373 VFHLQAPTWYGEPSPAAHWAFGGKLV-------QITPDGKGVSITNPKIS  415 (416)
T ss_dssp             SSCCCCCSTTCCCSCCCEEETTTEEE-------CBCTTSSCBCCBCCCCC
T ss_pred             cccccCCccccCCccceEEeeCCeEE-------EEeCCCCeEEEEEeccC
Confidence                    145677899999999877       55667777777776654

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=100.00  E-value=2.6e-40  Score=308.34  Aligned_cols=290  Identities=15%  Similarity=0.176  Sum_probs=224.8

Q ss_pred             eeecccCceEEEEEEcc-CCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEec-CCCeEEeeeCCcccce
Q psy14511         30 TAITREGDVVCGLKWSP-NGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCP-WEPTLLATGGGICDQT  106 (488)
Q Consensus        30 ~~~~~h~~~V~~l~~sp-~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~-~~~~l~~~~~~~~d~~  106 (488)
                      ....+|...|+||+|+| ++++||+|+ ||.|+|||+.+++. .....+.+|.+.|++|+|+| ++.+|++++.   |++
T Consensus       113 ~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~-~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~---D~~  188 (435)
T 4e54_B          113 QKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDK-PTFIKGIGAGGSITGLKFNPLNTNQFYASSM---EGT  188 (435)
T ss_dssp             CEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSC-CEEECCCSSSCCCCEEEECSSCTTEEEEECS---SSC
T ss_pred             ccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCc-eeEEEccCCCCCEEEEEEeCCCCCEEEEEeC---CCE
Confidence            34567888999999999 677999998 99999999987543 33445678999999999998 5666666555   999


Q ss_pred             EEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCC
Q psy14511        107 VRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKP  186 (488)
Q Consensus       107 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (488)
                      |++||++++.... +.                                                                
T Consensus       189 v~iwd~~~~~~~~-~~----------------------------------------------------------------  203 (435)
T 4e54_B          189 TRLQDFKGNILRV-FA----------------------------------------------------------------  203 (435)
T ss_dssp             EEEEETTSCEEEE-EE----------------------------------------------------------------
T ss_pred             EEEeeccCCceeE-Ee----------------------------------------------------------------
Confidence            9999986543211 10                                                                


Q ss_pred             ceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcE
Q psy14511        187 ERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYI  266 (488)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i  266 (488)
                                                                      .... +...+.+++|+|++++|+++ +.||.|
T Consensus       204 ------------------------------------------------~~~~-~~~~~~~~~~~~~~~~l~~g-~~dg~i  233 (435)
T 4e54_B          204 ------------------------------------------------SSDT-INIWFCSLDVSASSRMVVTG-DNVGNV  233 (435)
T ss_dssp             ------------------------------------------------CCSS-CSCCCCCEEEETTTTEEEEE-CSSSBE
T ss_pred             ------------------------------------------------ccCC-CCccEEEEEECCCCCEEEEE-eCCCcE
Confidence                                                            0001 44567889999999999999 999999


Q ss_pred             EEEECCcceeeeeeccccccEEEEEe--cC-CEEEEeecCCeEEEEECcCCCcc--ceeeecCCccEEEEEEccCCcEEE
Q psy14511        267 DLWHEQEERLIQKLRTHMHQVIAMCW--NG-NLLSCGTIGGNILHYDVRTHSDY--PTAITREGDVVCGLKWSPNGRYLA  341 (488)
Q Consensus       267 ~i~d~~~~~~~~~~~~~~~~v~~~~~--~~-~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~~~i~~~~~s~~~~~l~  341 (488)
                      ++||++. +.+..+.+|...|.+++|  ++ .++++++.|+.|++||+++....  .....+|...|.+++|+|+|++|+
T Consensus       234 ~~wd~~~-~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~  312 (435)
T 4e54_B          234 ILLNMDG-KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLL  312 (435)
T ss_dssp             EEEESSS-CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEE
T ss_pred             eeeccCc-ceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeE
Confidence            9999875 667788899999999999  33 58889999999999999875432  334467899999999999999999


Q ss_pred             EEe-cCeEEEEECCCCCCCcccc-----------eeeeeecCCCCEEEEEc----------cCCCCeEEEEeCCCcceeE
Q psy14511        342 SGS-NNTVKIWDFRQLDAKRPLG-----------LIVPKLKREGRELVTSH----------GKQDCSLKMWEYPRLHLIE  399 (488)
Q Consensus       342 ~~~-d~~i~iwd~~~~~~~~~~~-----------~~~~~~~~~~~~l~~~~----------g~~~~~i~i~d~~~~~~~~  399 (488)
                      +++ |+.|++||+.+++....+.           .....|+|++..++++.          +..++.|++||..+++.+.
T Consensus       313 s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~  392 (435)
T 4e54_B          313 TTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMC  392 (435)
T ss_dssp             EEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEE
T ss_pred             EEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEE
Confidence            999 6999999998875433221           11226777777776641          2345689999999999988


Q ss_pred             EEe-eccccEEEE-EEcCCCCEEEEEeCCCcEEEEecCCCCcc
Q psy14511        400 ELK-IHQERILSA-VLSPDQTCVAAASADETISIWNCFPRDKK  440 (488)
Q Consensus       400 ~~~-~~~~~v~~~-~~s~~~~~l~t~~~dg~v~iw~~~~~~~~  440 (488)
                      .+. +|...|.++ +|+|+|++||+|+ |+.|+||++++++.+
T Consensus       393 ~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk~r  434 (435)
T 4e54_B          393 QLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEARTR  434 (435)
T ss_dssp             EECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC-----
T ss_pred             EEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCeee
Confidence            765 677788887 6999999999886 889999999988754

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.4e-40  Score=308.55  Aligned_cols=345  Identities=13%  Similarity=0.159  Sum_probs=243.6

Q ss_pred             cCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEcc-CCcEEEEec-CCeEEEEeccc---cCcCCCccccc
Q psy14511          3 WNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSP-NGRYLASGS-NNTVKIWDFRQ---LDAKRPQVNNQ   77 (488)
Q Consensus         3 ~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp-~g~~las~~-d~~i~vwd~~~---~~~~~~~~~~~   77 (488)
                      .+++.+++++      .|+. +++.+.....+|.+.|++++|+| ++++||+|+ |+.|+|||+.+   +...+....+ 
T Consensus        37 ~~~~~~~~~~------~w~~-~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-  108 (437)
T 3gre_A           37 PIQEIVRSPN------MGNL-RGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-  108 (437)
T ss_dssp             CCCCCCCCCC------GGGC-CCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-
T ss_pred             Cccccccccc------cccc-cceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-
Confidence            3666666654      3774 34434444489999999999999 999999998 99999999987   3322222222 


Q ss_pred             ccccceeEEEEecCCCeEEeeeCCcccceEEEEecC---CCeeeeeeecCCCccccccccccccccceeEEEEEeeeecc
Q psy14511         78 CHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSM---NGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEID  154 (488)
Q Consensus        78 ~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (488)
                      +|...|.+++|+|+++++++++.   |++|++||+.   +++.......+  .+....+.+..                 
T Consensus       109 ~h~~~v~~~~~~~~~~~l~s~s~---dg~i~vwd~~~~~~~~~~~~~~~~--~i~~~~~~~~~-----------------  166 (437)
T 3gre_A          109 DCSSTVTQITMIPNFDAFAVSSK---DGQIIVLKVNHYQQESEVKFLNCE--CIRKINLKNFG-----------------  166 (437)
T ss_dssp             ECSSCEEEEEECTTSSEEEEEET---TSEEEEEEEEEEEETTEEEEEEEE--EEEEEEGGGGS-----------------
T ss_pred             cCCCCEEEEEEeCCCCEEEEEeC---CCEEEEEEeccccCCceeeccccc--eeEEEEccCcc-----------------
Confidence            59999999999999988877776   9999999995   45444333322  11111111100                 


Q ss_pred             ccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeee--e--CCCcEEEEECCCeEEEEECCCCce
Q psy14511        155 RKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLD--W--GYHDTLAVALDTSVYTWNTKTNKT  230 (488)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~d~~v~iw~~~~~~~  230 (488)
                                                                ....+..+.  +  ++..+++++.|+.|++||+.+++.
T Consensus       167 ------------------------------------------~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~  204 (437)
T 3gre_A          167 ------------------------------------------KNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLER  204 (437)
T ss_dssp             ------------------------------------------SCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCE
T ss_pred             ------------------------------------------cccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCee
Confidence                                                      000111111  1  234677888999999999999998


Q ss_pred             EEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeec-cccccEEEEEe------cCCEEEEeecC
Q psy14511        231 QLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLR-THMHQVIAMCW------NGNLLSCGTIG  303 (488)
Q Consensus       231 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~-~~~~~v~~~~~------~~~~l~~~~~d  303 (488)
                      ...+.... |...|++++|+|++++++++ +.||.|++||+++++++..+. .|...|.++++      ++.++++++.|
T Consensus       205 ~~~~~~~~-h~~~v~~~~~s~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~d  282 (437)
T 3gre_A          205 LQIIENSP-RHGAVSSICIDEECCVLILG-TTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSK  282 (437)
T ss_dssp             EEEEECCG-GGCCEEEEEECTTSCEEEEE-ETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTT
T ss_pred             eEEEccCC-CCCceEEEEECCCCCEEEEE-cCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCC
Confidence            88777644 67899999999999999999 999999999999999988886 78889999966      35699999999


Q ss_pred             CeEEEEECcCCCccceeeec--------------------------CCccEEEEEEccCCcEEEEEe-cCeEEEEECCCC
Q psy14511        304 GNILHYDVRTHSDYPTAITR--------------------------EGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQL  356 (488)
Q Consensus       304 g~i~i~d~~~~~~~~~~~~~--------------------------~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~  356 (488)
                      |.|++||++++. ....+..                          |...|.+++|+ ++++|++++ |+.|++||+.++
T Consensus       283 g~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~  360 (437)
T 3gre_A          283 TFLTIWNFVKGH-CQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNEL  360 (437)
T ss_dssp             EEEEEEETTTTE-EEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCG
T ss_pred             CcEEEEEcCCCc-EEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCc
Confidence            999999998754 2222221                          66678899999 778999999 699999999988


Q ss_pred             CCCcccceee--------eeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCC--CCEEEEEeCC
Q psy14511        357 DAKRPLGLIV--------PKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPD--QTCVAAASAD  426 (488)
Q Consensus       357 ~~~~~~~~~~--------~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~t~~~d  426 (488)
                      +....+....        ..+++...+++.  .        |+............|.+.|++++|+++  +.+|++|+.|
T Consensus       361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--------~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~d  430 (437)
T 3gre_A          361 SSSKAVISPSRFSDVFIPTQVTANLTMLLR--K--------MKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNS  430 (437)
T ss_dssp             GGCEEEECC--CCCEEEEEEEETTEEEEEE--E--------CC-------------CCCEEEEEEEESSSSEEEEEEETT
T ss_pred             ccceEEecccccCceEEEEEeecceEEEEE--e--------cccccccccCcccccccceeeEeeeccCCceEEEEEcCC
Confidence            6544433221        133333333332  1        223334444556679999999999998  7899999999


Q ss_pred             CcEEEEe
Q psy14511        427 ETISIWN  433 (488)
Q Consensus       427 g~v~iw~  433 (488)
                      |.|++|+
T Consensus       431 G~I~iw~  437 (437)
T 3gre_A          431 GLIGIFQ  437 (437)
T ss_dssp             SCEEEEC
T ss_pred             ceEEEeC
Confidence            9999995

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=100.00  E-value=1.1e-39  Score=302.43  Aligned_cols=305  Identities=16%  Similarity=0.217  Sum_probs=241.9

Q ss_pred             cCCeEEEEEcccCcccceeecccCceEEEEEEcc-CCcEEEEec-CCeEEEEeccccCcCCCccc----------ccccc
Q psy14511         13 IGGNILHYDVRTHSDYPTAITREGDVVCGLKWSP-NGRYLASGS-NNTVKIWDFRQLDAKRPQVN----------NQCHL   80 (488)
Q Consensus        13 ~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp-~g~~las~~-d~~i~vwd~~~~~~~~~~~~----------~~~h~   80 (488)
                      .++.+++|+....+. ...+.+|.+.|++++|+| ++++||+++ |+.|++||+.+++.......          ..+|.
T Consensus        21 ~~~~~~v~~~~~~~~-~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~   99 (408)
T 4a11_B           21 AESTRRVLGLELNKD-RDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHR   99 (408)
T ss_dssp             HHHHHHHHTEEECTT-EEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCS
T ss_pred             ccCcceeeccccCcc-eeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCC
Confidence            355678898887764 467889999999999999 999999998 99999999987654433221          13599


Q ss_pred             cceeEEEEec-CCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeecccccee
Q psy14511         81 SAVKAIAWCP-WEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVL  159 (488)
Q Consensus        81 ~~v~~l~~~~-~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (488)
                      ..|.+++|+| ++..+++++.   |+.|++||+.+++....+                                      
T Consensus       100 ~~v~~~~~~~~~~~~l~s~~~---d~~i~iwd~~~~~~~~~~--------------------------------------  138 (408)
T 4a11_B          100 YSVETVQWYPHDTGMFTSSSF---DKTLKVWDTNTLQTADVF--------------------------------------  138 (408)
T ss_dssp             SCEEEEEECTTCTTCEEEEET---TSEEEEEETTTTEEEEEE--------------------------------------
T ss_pred             CcEEEEEEccCCCcEEEEEeC---CCeEEEeeCCCCccceec--------------------------------------
Confidence            9999999999 5556666555   999999999876643221                                      


Q ss_pred             ccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCC
Q psy14511        160 NQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTY  239 (488)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~  239 (488)
                                                                                                 .    
T Consensus       139 ---------------------------------------------------------------------------~----  139 (408)
T 4a11_B          139 ---------------------------------------------------------------------------N----  139 (408)
T ss_dssp             ---------------------------------------------------------------------------E----
T ss_pred             ---------------------------------------------------------------------------c----
Confidence                                                                                       1    


Q ss_pred             CCCceEEEEEcCCC---CeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCC-EEEEeecCCeEEEEECcC
Q psy14511        240 DNAYISCVAWKPRT---TDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGN-LLSCGTIGGNILHYDVRT  313 (488)
Q Consensus       240 ~~~~i~~~~~~~~~---~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~-~l~~~~~dg~i~i~d~~~  313 (488)
                      +...+.++.++|.+   ..++++ +.++.|++||+++++.+..+..|...|.+++|  +++ ++++++.||.|++||++.
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~  218 (408)
T 4a11_B          140 FEETVYSHHMSPVSTKHCLVAVG-TRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRR  218 (408)
T ss_dssp             CSSCEEEEEECSSCSSCCEEEEE-ESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTC
T ss_pred             CCCceeeeEeecCCCCCcEEEEE-cCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCC
Confidence            44567788888754   478888 99999999999999999999999999999999  455 699999999999999987


Q ss_pred             CCccceee---------------ecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCccccee----------ee
Q psy14511        314 HSDYPTAI---------------TREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLI----------VP  367 (488)
Q Consensus       314 ~~~~~~~~---------------~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~----------~~  367 (488)
                      .......+               ..|...|.+++|+|++++|++++ |+.|++||+.+++........          ..
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~  298 (408)
T 4a11_B          219 ASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFT  298 (408)
T ss_dssp             SSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCE
T ss_pred             CCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeE
Confidence            65444443               57888999999999999999998 699999999987654332211          01


Q ss_pred             eecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccc
Q psy14511        368 KLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKR  441 (488)
Q Consensus       368 ~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~  441 (488)
                      .....+..+++  +..++.|++||+.+++++..+.+|...|++++|+|++++|++++.||.|++||+.++++..
T Consensus       299 ~~~~~~~~~~~--~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~  370 (408)
T 4a11_B          299 VSCGCSSEFVF--VPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVP  370 (408)
T ss_dssp             ECCSSSSCEEE--EEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC-----
T ss_pred             EecCCCceEEE--EecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccC
Confidence            22233344444  4668999999999999999999999999999999999999999999999999999988764

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=100.00  E-value=4.9e-39  Score=303.10  Aligned_cols=327  Identities=17%  Similarity=0.196  Sum_probs=244.5

Q ss_pred             cCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCccccccccc
Q psy14511          3 WNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLS   81 (488)
Q Consensus         3 ~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~   81 (488)
                      +++++|++|+.||+|++||+.+++.+ ..+.+|.+.|.+++|+|++ +|++|+ |++|++||+++++   .+..+.+|.+
T Consensus       130 ~~~~~l~sgs~dg~i~vwd~~~~~~~-~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~---~~~~~~~h~~  204 (464)
T 3v7d_B          130 FEDNYVITGADDKMIRVYDSINKKFL-LQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGC---CTHVFEGHNS  204 (464)
T ss_dssp             EETTEEEEEETTSCEEEEETTTTEEE-EEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTE---EEEEECCCSS
T ss_pred             ECCCEEEEEcCCCcEEEEECCCCcEE-EEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCc---EEEEECCCCC
Confidence            47899999999999999999998844 6688999999999999998 888887 9999999998754   4455778999


Q ss_pred             ceeEEEEec--CCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeecccccee
Q psy14511         82 AVKAIAWCP--WEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVL  159 (488)
Q Consensus        82 ~v~~l~~~~--~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (488)
                      .|.+++|++  +++++++++.   |++|++||+.++............. .....+..  ... ..              
T Consensus       205 ~v~~l~~~~~~~~~~l~s~s~---d~~i~vwd~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~-~~--------------  263 (464)
T 3v7d_B          205 TVRCLDIVEYKNIKYIVTGSR---DNTLHVWKLPKESSVPDHGEEHDYP-LVFHTPEE--NPY-FV--------------  263 (464)
T ss_dssp             CEEEEEEEESSSCEEEEEEET---TSCEEEEECCCCCCC------CCSS-EEESCGGG--CTT-EE--------------
T ss_pred             ccEEEEEecCCCCCEEEEEcC---CCcEEEeeCCCCcccccccccCCcc-eEeeccCC--CeE-EE--------------
Confidence            999999984  6666666665   9999999998776543322211100 00000000  000 00              


Q ss_pred             ccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCC
Q psy14511        160 NQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTY  239 (488)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~  239 (488)
                                                  ...    ......+..+...++.+++++.|+.|++||+.+++....+..   
T Consensus       264 ----------------------------~~~----~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~---  308 (464)
T 3v7d_B          264 ----------------------------GVL----RGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSG---  308 (464)
T ss_dssp             ----------------------------EEE----CCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECC---
T ss_pred             ----------------------------EEc----cCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecC---
Confidence                                        000    001122333455667888999999999999999887666543   


Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCccce
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPT  319 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~  319 (488)
                      |...|.+++|+|+++.++++ +.|+.|++||+++++.+..+.+|...+.++.++++++++++.||.|++||+++....  
T Consensus       309 ~~~~v~~~~~~~~~~~l~sg-~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~--  385 (464)
T 3v7d_B          309 HTDRIYSTIYDHERKRCISA-SMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRK--  385 (464)
T ss_dssp             CSSCEEEEEEETTTTEEEEE-ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEE--
T ss_pred             CCCCEEEEEEcCCCCEEEEE-eCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEcCCEEEEEeCCCcEEEEECCCCcee--
Confidence            88999999999999999999 999999999999999999999999999999999999999999999999999875422  


Q ss_pred             eeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeE
Q psy14511        320 AITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIE  399 (488)
Q Consensus       320 ~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~  399 (488)
                      ....+...+..++|+|+++++++++|+.|++||++                                       +++++.
T Consensus       386 ~~~~~~~~~~~~~~~~~~~~l~~~~dg~i~iwd~~---------------------------------------~g~~~~  426 (464)
T 3v7d_B          386 FSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLR---------------------------------------SGKLVH  426 (464)
T ss_dssp             EEEECTTCCCEEEEEECSSEEEEEETTEEEEEETT---------------------------------------TCCEEE
T ss_pred             eeecCCCCccEEEEEeCCCEEEEecCCeEEEEECC---------------------------------------CCcEEe
Confidence            22345566777889999998888866666666655                                       444444


Q ss_pred             E-EeeccccEEEEEEcCCCCEEEEEeCCCcEEEEe
Q psy14511        400 E-LKIHQERILSAVLSPDQTCVAAASADETISIWN  433 (488)
Q Consensus       400 ~-~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~  433 (488)
                      . +..|...|.+++|+ +..++++++.||.+.+|-
T Consensus       427 ~~~~~~~~~v~~v~~~-~~~l~~~~~~~g~~~i~~  460 (464)
T 3v7d_B          427 ANILKDADQIWSVNFK-GKTLVAAVEKDGQSFLEI  460 (464)
T ss_dssp             SCTTTTCSEEEEEEEE-TTEEEEEEEETTEEEEEE
T ss_pred             hhhccCCCcEEEEEec-CCEEEEEEEeCCeEEEEE
Confidence            3 45678899999997 445566666777666554

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=100.00  E-value=8.1e-40  Score=293.09  Aligned_cols=275  Identities=17%  Similarity=0.287  Sum_probs=203.5

Q ss_pred             cCCceEEEeecCCeEEEEEcccCcc-cceee-cc-cCceEEEEEEccCCcEEEEec-CCeEEEEeccccC----cCCCcc
Q psy14511          3 WNGNLLSCGTIGGNILHYDVRTHSD-YPTAI-TR-EGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLD----AKRPQV   74 (488)
Q Consensus         3 ~dg~~la~g~~dg~i~iwd~~~~~~-~~~~~-~~-h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~----~~~~~~   74 (488)
                      +++.+||+|+.|++|+|||+..+.. ....+ .+ |...|.+++|+|++++||+++ |+.|+|||+....    ....+.
T Consensus        22 ~s~~~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~  101 (330)
T 2hes_X           22 FSQGILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLA  101 (330)
T ss_dssp             EETTEEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEE
T ss_pred             cCCCEEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEE
Confidence            4456999999999999999987532 22334 44 999999999999999999998 9999999986422    123345


Q ss_pred             cccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCC----eeeeeeecCCCccccccccccccccceeEEEEEee
Q psy14511         75 NNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNG----KEKCHVKTDSQQANDETISYREQKKRRHLSFLLHG  150 (488)
Q Consensus        75 ~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (488)
                      .+.+|...|.+++|+|++++|++++.   |++|++||+...    +.+..+..+...                       
T Consensus       102 ~~~~h~~~V~~v~~sp~g~~las~s~---D~~v~iwd~~~~~~~~~~~~~~~~h~~~-----------------------  155 (330)
T 2hes_X          102 IIEGHENEVKGVAWSNDGYYLATCSR---DKSVWIWETDESGEEYECISVLQEHSQD-----------------------  155 (330)
T ss_dssp             EEC----CEEEEEECTTSCEEEEEET---TSCEEEEECCTTCCCCEEEEEECCCSSC-----------------------
T ss_pred             EEcCCCCcEEEEEECCCCCEEEEEeC---CCEEEEEeccCCCCCeEEEEEeccCCCc-----------------------
Confidence            57889999999999999988877776   999999999532    223333333221                       


Q ss_pred             eeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC--CCcEEEEECCCeEEEEECCCC
Q psy14511        151 FEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG--YHDTLAVALDTSVYTWNTKTN  228 (488)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~v~iw~~~~~  228 (488)
                                                                        +..+.|+  +..+++++.|+.|++||..++
T Consensus       156 --------------------------------------------------v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~  185 (330)
T 2hes_X          156 --------------------------------------------------VKHVIWHPSEALLASSSYDDTVRIWKDYDD  185 (330)
T ss_dssp             --------------------------------------------------EEEEEECSSSSEEEEEETTSCEEEEEEETT
T ss_pred             --------------------------------------------------eEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence                                                              2233343  346788889999999999877


Q ss_pred             ceEEEEecCCCCCCceEEEEEcCC--CCeEEEEeCCCCcEEEEECCcc--------eeeeeecc-ccccEEEEEe-cCCE
Q psy14511        229 KTQLLVEYPTYDNAYISCVAWKPR--TTDLAVTNTCTEYIDLWHEQEE--------RLIQKLRT-HMHQVIAMCW-NGNL  296 (488)
Q Consensus       229 ~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~~~~~i~i~d~~~~--------~~~~~~~~-~~~~v~~~~~-~~~~  296 (488)
                      .......+.+ |...|.+++|+|+  +..++++ +.|++|++||+..+        .+...+.. |...|.+++| ++..
T Consensus       186 ~~~~~~~~~~-h~~~v~~~~~~~~~~~~~l~s~-s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~  263 (330)
T 2hes_X          186 DWECVAVLNG-HEGTVWSSDFDKTEGVFRLCSG-SDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGL  263 (330)
T ss_dssp             EEEEEEEECC-CSSCEEEEEECCSSSSCEEEEE-ETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSC
T ss_pred             CeeEEEEccC-CCCcEEEEEecCCCCeeEEEEE-eCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCE
Confidence            5444445556 8999999999998  6678888 99999999998764        34455554 8999999999 5678


Q ss_pred             EEEeecCCeEEEEECcCCC-ccc-eeeecCCc-cEEEEEEcc--CCcEEEEEe-cCeEEEEECCC
Q psy14511        297 LSCGTIGGNILHYDVRTHS-DYP-TAITREGD-VVCGLKWSP--NGRYLASGS-NNTVKIWDFRQ  355 (488)
Q Consensus       297 l~~~~~dg~i~i~d~~~~~-~~~-~~~~~~~~-~i~~~~~s~--~~~~l~~~~-d~~i~iwd~~~  355 (488)
                      |++++.||.|++||..++. ... .....|.. .|.+++|+|  ++++|++++ |+.|++||+++
T Consensus       264 l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~  328 (330)
T 2hes_X          264 IASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK  328 (330)
T ss_dssp             EEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred             EEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence            9999999999999987653 122 23356776 899999999  789999998 69999999864

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=100.00  E-value=3.2e-40  Score=301.80  Aligned_cols=279  Identities=19%  Similarity=0.268  Sum_probs=220.7

Q ss_pred             ccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCc----CCCcccc
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDA----KRPQVNN   76 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~----~~~~~~~   76 (488)
                      +.||++||+|+.||+|+|||+.+++.. ..+..|...|.+++|+|+|++||+|+ |+.|++||+.+...    ......+
T Consensus        75 sp~~~~l~s~s~D~~v~iWd~~~~~~~-~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~  153 (380)
T 3iz6_a           75 TPEKNWIVSASQDGRLIVWNALTSQKT-HAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVL  153 (380)
T ss_dssp             CTTSSCEEEEETTSEEEEEETTTTEEE-EEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBC
T ss_pred             cCCCCEEEEEeCCCeEEEEECCCCccc-eEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeec
Confidence            348999999999999999999988744 66889999999999999999999999 99999999975321    2234457


Q ss_pred             cccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeecccc
Q psy14511         77 QCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRK  156 (488)
Q Consensus        77 ~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (488)
                      .+|.+.|.++.|.|++...+++++.  |++|++||+.+++.+..+......                             
T Consensus       154 ~gh~~~v~~~~~~~~~~~~l~s~s~--D~~i~~wd~~~~~~~~~~~~~~~~-----------------------------  202 (380)
T 3iz6_a          154 TGHKGYASSCQYVPDQETRLITGSG--DQTCVLWDVTTGQRISIFGSEFPS-----------------------------  202 (380)
T ss_dssp             CCCSSCCCCCBCCSSSSSCEEEECT--TSCEEEECTTTCCEEEEECCCSSS-----------------------------
T ss_pred             cCCCcceEEEEEecCCCCEEEEECC--CCcEEEEEcCCCcEEEEeecccCC-----------------------------
Confidence            8899999999999986654555553  999999999998876554221000                             


Q ss_pred             ceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeee---CCCcEEEEECCCeEEEEECCC-CceEE
Q psy14511        157 KVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDW---GYHDTLAVALDTSVYTWNTKT-NKTQL  232 (488)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~d~~v~iw~~~~-~~~~~  232 (488)
                                                             .....+..+.+   .++.+++++.|+.|++||++. ++...
T Consensus       203 ---------------------------------------~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~  243 (380)
T 3iz6_a          203 ---------------------------------------GHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVR  243 (380)
T ss_dssp             ---------------------------------------SCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCE
T ss_pred             ---------------------------------------CCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceE
Confidence                                                   00011222232   235678888999999999974 34444


Q ss_pred             EEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecccc-------ccEEEEEe--cCCEEEEeecC
Q psy14511        233 LVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHM-------HQVIAMCW--NGNLLSCGTIG  303 (488)
Q Consensus       233 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~-------~~v~~~~~--~~~~l~~~~~d  303 (488)
                      .+  .+ |...|.+++|+|++++|+++ +.|++|++||+++++.+..+..+.       ..+.+++|  +++++++|+.|
T Consensus       244 ~~--~~-h~~~v~~v~~~p~~~~l~s~-s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d  319 (380)
T 3iz6_a          244 TY--HG-HEGDINSVKFFPDGQRFGTG-SDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSN  319 (380)
T ss_dssp             EE--CC-CSSCCCEEEECTTSSEEEEE-CSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT
T ss_pred             EE--CC-cCCCeEEEEEecCCCeEEEE-cCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECC
Confidence            33  33 88999999999999999999 999999999999998887775432       24778888  79999999999


Q ss_pred             CeEEEEECcCCCccceee----ecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCC
Q psy14511        304 GNILHYDVRTHSDYPTAI----TREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQL  356 (488)
Q Consensus       304 g~i~i~d~~~~~~~~~~~----~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~  356 (488)
                      |.|++||+..++ ....+    .+|...|.+++|+|+|++|++++ |+.|++|++...
T Consensus       320 g~i~vwd~~~~~-~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~  376 (380)
T 3iz6_a          320 GDCYVWDTLLAE-MVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGH  376 (380)
T ss_dssp             SCEEEEETTTCC-EEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSS
T ss_pred             CCEEEEECCCCc-eEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCC
Confidence            999999998764 33333    67999999999999999999999 699999998754

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=100.00  E-value=2.2e-39  Score=288.62  Aligned_cols=269  Identities=18%  Similarity=0.302  Sum_probs=224.8

Q ss_pred             ccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccc
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHL   80 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~   80 (488)
                      +.||++||+|+.||.|+|||..+++. ...+.+|...|.+++|+|++++|++++ |+.|++||+.+++   .+..+.+|.
T Consensus        32 s~~~~~l~s~~~dg~i~iw~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~---~~~~~~~~~  107 (312)
T 4ery_A           32 SPNGEWLASSSADKLIKIWGAYDGKF-EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK---CLKTLKGHS  107 (312)
T ss_dssp             CTTSSEEEEEETTSCEEEEETTTCCE-EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC---EEEEEECCS
T ss_pred             CCCCCEEEEeeCCCeEEEEeCCCccc-chhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCc---EEEEEcCCC
Confidence            34899999999999999999988774 466889999999999999999999998 9999999998743   445577899


Q ss_pred             cceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceec
Q psy14511         81 SAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLN  160 (488)
Q Consensus        81 ~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (488)
                      ..|.+++|+|+++++++++.   |+.|++||+.+++.+..+..+...+.                               
T Consensus       108 ~~v~~~~~~~~~~~l~s~~~---d~~i~iwd~~~~~~~~~~~~~~~~v~-------------------------------  153 (312)
T 4ery_A          108 NYVFCCNFNPQSNLIVSGSF---DESVRIWDVKTGKCLKTLPAHSDPVS-------------------------------  153 (312)
T ss_dssp             SCEEEEEECSSSSEEEEEET---TSCEEEEETTTCCEEEEECCCSSCEE-------------------------------
T ss_pred             CCEEEEEEcCCCCEEEEEeC---CCcEEEEECCCCEEEEEecCCCCcEE-------------------------------
Confidence            99999999999988777776   99999999999887766655433222                               


Q ss_pred             cccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC--CCcEEEEECCCeEEEEECCCCceEEEEecCC
Q psy14511        161 QSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG--YHDTLAVALDTSVYTWNTKTNKTQLLVEYPT  238 (488)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~  238 (488)
                                                                .+.|+  +..+++++.|+.|++||+.+++....+... 
T Consensus       154 ------------------------------------------~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~-  190 (312)
T 4ery_A          154 ------------------------------------------AVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD-  190 (312)
T ss_dssp             ------------------------------------------EEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCS-
T ss_pred             ------------------------------------------EEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEecc-
Confidence                                                      22332  245778889999999999998876655332 


Q ss_pred             CCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEE----EEe-cCCEEEEeecCCeEEEEECcC
Q psy14511        239 YDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIA----MCW-NGNLLSCGTIGGNILHYDVRT  313 (488)
Q Consensus       239 ~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~----~~~-~~~~l~~~~~dg~i~i~d~~~  313 (488)
                       +...+.+++|+|++++++++ +.|+.|++||+++++.+..+.+|.....+    ... ++.++++|+.||.|++||+.+
T Consensus       191 -~~~~~~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~  268 (312)
T 4ery_A          191 -DNPPVSFVKFSPNGKYILAA-TLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT  268 (312)
T ss_dssp             -SCCCEEEEEECTTSSEEEEE-ETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTT
T ss_pred             -CCCceEEEEECCCCCEEEEE-cCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCC
Confidence             66789999999999999999 99999999999999999998887654322    222 578999999999999999988


Q ss_pred             CCccceeeecCCccEEEEEEccCCcEEEEEe---cCeEEEEECC
Q psy14511        314 HSDYPTAITREGDVVCGLKWSPNGRYLASGS---NNTVKIWDFR  354 (488)
Q Consensus       314 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~---d~~i~iwd~~  354 (488)
                      . .....+.+|...|.+++|+|+++++++++   |+.|++|+.+
T Consensus       269 ~-~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d  311 (312)
T 4ery_A          269 K-EIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD  311 (312)
T ss_dssp             C-CEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred             c-hhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence            5 46778899999999999999999999986   5999999864

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=100.00  E-value=2.7e-38  Score=293.44  Aligned_cols=298  Identities=28%  Similarity=0.457  Sum_probs=260.7

Q ss_pred             ccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEE
Q psy14511        178 LPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLA  257 (488)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~  257 (488)
                      ..+.++..+.+++.+|...++|+.+.++|+.+++++++.|+.|++||..+++....+...+ |...|++++|+|+|++|+
T Consensus        85 ~~r~i~~~p~~~l~ap~~~~d~y~~~l~wS~~n~lAvgld~tV~lWd~~tg~~~~~~~~~~-~~~~V~sv~fspdg~~la  163 (420)
T 4gga_A           85 TCRYIPSLPDRILDAPEIRNDYYLNLVDWSSGNVLAVALDNSVYLWSASSGDILQLLQMEQ-PGEYISSVAWIKEGNYLA  163 (420)
T ss_dssp             -CCCCCSSCSEEEECTTCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECCS-TTCCEEEEEECTTSSEEE
T ss_pred             CCcccCCCCceEEECCCCcccccceeEEECCCCEEEEEeCCEEEEEECCCCCEEEEEEecC-CCCcEEEEEECCCCCEEE
Confidence            4456788899999999999999999999999999999999999999999999988888877 888999999999999999


Q ss_pred             EEeCCCCcEEEEECCcceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCC
Q psy14511        258 VTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNG  337 (488)
Q Consensus       258 ~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~  337 (488)
                      ++ +.||.|++||+.+++.+..+.+|...+.++++++..+++|+.|+.+++||..........+.+|...+..+.++|++
T Consensus       164 sg-s~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g  242 (420)
T 4gga_A          164 VG-TSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDG  242 (420)
T ss_dssp             EE-ETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTS
T ss_pred             EE-ECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCC
Confidence            99 99999999999999999999999999999999999999999999999999998777778889999999999999999


Q ss_pred             cEEEEEe-cCeEEEEECCCCCCCccc-cee--------eeeecCCCC-EEEEEccCCCCeEEEEeCCCcceeEEEeeccc
Q psy14511        338 RYLASGS-NNTVKIWDFRQLDAKRPL-GLI--------VPKLKREGR-ELVTSHGKQDCSLKMWEYPRLHLIEELKIHQE  406 (488)
Q Consensus       338 ~~l~~~~-d~~i~iwd~~~~~~~~~~-~~~--------~~~~~~~~~-~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~  406 (488)
                      +++++++ |+.+++|+..+++..... ...        ..+|+|++. .+++++|+.|+.|++||+.+++++..+..| .
T Consensus       243 ~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~-~  321 (420)
T 4gga_A          243 RHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH-S  321 (420)
T ss_dssp             SEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECS-S
T ss_pred             CeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccc-c
Confidence            9999999 699999999876533211 111        227888654 555656789999999999999999888755 5


Q ss_pred             cEEEEEEcCCCCEEEEEe--CCCcEEEEecCCCCcc-ccccccCCcceEEeecCCCceEEEEeeecccccceeeEEEEee
Q psy14511        407 RILSAVLSPDQTCVAAAS--ADETISIWNCFPRDKK-RKARQVGSGSSLEFAILKQPVSLTALLRSRAVEKQQHAIAYTV  483 (488)
Q Consensus       407 ~v~~~~~s~~~~~l~t~~--~dg~v~iw~~~~~~~~-~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~~  483 (488)
                      .+.++.|+|+++.+++++  .|+.|++||+.++++. .+.+|.+.|.+++|+|+++.+       +.++.|..+.+|...
T Consensus       322 ~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l-------~S~s~D~tvriWdv~  394 (420)
T 4gga_A          322 QVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATV-------ASAAADETLRLWRCF  394 (420)
T ss_dssp             CEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCE-------EEEETTTEEEEECCS
T ss_pred             ceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEE-------EEEecCCeEEEEECC
Confidence            689999999999998865  7899999999999887 456799999999999999987       456678888888765


Q ss_pred             cc
Q psy14511        484 FG  485 (488)
Q Consensus       484 ~g  485 (488)
                      +.
T Consensus       395 ~~  396 (420)
T 4gga_A          395 EL  396 (420)
T ss_dssp             CS
T ss_pred             CC
Confidence            43

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=100.00  E-value=1.2e-38  Score=285.08  Aligned_cols=261  Identities=36%  Similarity=0.658  Sum_probs=234.8

Q ss_pred             cccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeE
Q psy14511        177 KLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDL  256 (488)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l  256 (488)
                      +..+.+|..|.+++.+|++..+++.+.++|+++++++++.|++|++||+.+++....+...+ |...|++++|+|+++++
T Consensus         4 ~~~r~~p~~p~rvldap~~~~d~y~~~l~WS~~~~lAvg~D~tV~iWd~~tg~~~~~~~~~~-~~~~V~~v~~~~~~~~l   82 (318)
T 4ggc_A            4 KTCRYIPSLPDRILDAPEIRNDYYLNLVDWSSGNVLAVALDNSVYLWSASSGDILQLLQMEQ-PGEYISSVAWIKEGNYL   82 (318)
T ss_dssp             --CCCCCSSCSEEEECTTCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECCS-TTCCEEEEEECTTSSEE
T ss_pred             CCCcccCCCCCEEeeCCCCcccccceEEEECCCCEEEEEeCCEEEEEECCCCCEEEEEEecC-CCCeEEEEEECCCCCEE
Confidence            34567889999999999999999999999999999999999999999999999998888777 88899999999999999


Q ss_pred             EEEeCCCCcEEEEECCcceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccC
Q psy14511        257 AVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPN  336 (488)
Q Consensus       257 ~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~  336 (488)
                      +++ +.|+.|++||+++++.+..+.+|...+.++.+++..+++++.++.+++|+..........+.+|...+..+.++++
T Consensus        83 ~sg-s~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (318)
T 4ggc_A           83 AVG-TSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPD  161 (318)
T ss_dssp             EEE-ETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTT
T ss_pred             EEE-ECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCC
Confidence            999 9999999999999999999999999999999999999999999999999999877778888999999999999999


Q ss_pred             CcEEEEEe-cCeEEEEECCCCCCCccccee--------------------------------------------------
Q psy14511        337 GRYLASGS-NNTVKIWDFRQLDAKRPLGLI--------------------------------------------------  365 (488)
Q Consensus       337 ~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~--------------------------------------------------  365 (488)
                      +++|++++ |+.|++||+++++........                                                  
T Consensus       162 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~  241 (318)
T 4ggc_A          162 GRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHS  241 (318)
T ss_dssp             SSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSS
T ss_pred             CCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccccee
Confidence            99999999 699999999875432110000                                                  


Q ss_pred             ---eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCc
Q psy14511        366 ---VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDK  439 (488)
Q Consensus       366 ---~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~  439 (488)
                         ...|+|+++.+++++|+.|+.|++||+++++++.++.+|.+.|++++|+||+++||||+.||+|+|||+.+.++
T Consensus       242 ~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~dP  318 (318)
T 4ggc_A          242 QVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELDP  318 (318)
T ss_dssp             CEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCCCC
T ss_pred             eeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCC
Confidence               11788899999887788999999999999999999999999999999999999999999999999999987543

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=100.00  E-value=7.5e-39  Score=285.39  Aligned_cols=264  Identities=16%  Similarity=0.306  Sum_probs=216.5

Q ss_pred             CCceEEEeecCCeEEEEEcccCcc----cceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSD----YPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQC   78 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~----~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~   78 (488)
                      ++++|++|+.|++|++||+.....    ....+.+|...|.+++|+|+|++|++++ |++|++||+.+++   .+..+.+
T Consensus        29 ~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~---~~~~~~~  105 (319)
T 3frx_A           29 QPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGE---TYQRFVG  105 (319)
T ss_dssp             CTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE---EEEEEEC
T ss_pred             CccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCC---eeEEEcc
Confidence            358999999999999999875432    2346789999999999999999999999 9999999998754   4455788


Q ss_pred             cccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccce
Q psy14511         79 HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKV  158 (488)
Q Consensus        79 h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (488)
                      |...|.+++|+|++..+++++.   |++|++||+.. +.+.                                       
T Consensus       106 h~~~v~~~~~~~~~~~l~s~s~---D~~i~vwd~~~-~~~~---------------------------------------  142 (319)
T 3frx_A          106 HKSDVMSVDIDKKASMIISGSR---DKTIKVWTIKG-QCLA---------------------------------------  142 (319)
T ss_dssp             CSSCEEEEEECTTSCEEEEEET---TSCEEEEETTS-CEEE---------------------------------------
T ss_pred             CCCcEEEEEEcCCCCEEEEEeC---CCeEEEEECCC-CeEE---------------------------------------
Confidence            9999999999999988777776   99999999853 2111                                       


Q ss_pred             eccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCC
Q psy14511        159 LNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPT  238 (488)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~  238 (488)
                                                                                                  .+.+
T Consensus       143 ----------------------------------------------------------------------------~~~~  146 (319)
T 3frx_A          143 ----------------------------------------------------------------------------TLLG  146 (319)
T ss_dssp             ----------------------------------------------------------------------------EECC
T ss_pred             ----------------------------------------------------------------------------EEec
Confidence                                                                                        1112


Q ss_pred             CCCCceEEEEEcCC------CCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEE
Q psy14511        239 YDNAYISCVAWKPR------TTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYD  310 (488)
Q Consensus       239 ~~~~~i~~~~~~~~------~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d  310 (488)
                       |...+.+++++|.      +..++++ +.|+.|++||+++.+....+.+|...|.+++|  ++++|++++.||.|++||
T Consensus       147 -h~~~v~~~~~~~~~~~~~~~~~l~s~-~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd  224 (319)
T 3frx_A          147 -HNDWVSQVRVVPNEKADDDSVTIISA-GNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWN  224 (319)
T ss_dssp             -CSSCEEEEEECCC------CCEEEEE-ETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEE
T ss_pred             -cCCcEEEEEEccCCCCCCCccEEEEE-eCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence             6777888888885      3477877 99999999999999999999999999999999  789999999999999999


Q ss_pred             CcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccc-------------eeeeeecCCCCEEE
Q psy14511        311 VRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLG-------------LIVPKLKREGRELV  377 (488)
Q Consensus       311 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~-------------~~~~~~~~~~~~l~  377 (488)
                      +.+.+ ....+.. ...|.+++|+|++.+|+++.++.+++|++........+.             ....+|+|+|++|+
T Consensus       225 ~~~~~-~~~~~~~-~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~  302 (319)
T 3frx_A          225 LAAKK-AMYTLSA-QDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLF  302 (319)
T ss_dssp             TTTTE-EEEEEEC-CSCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEE
T ss_pred             CCCCc-EEEEecC-CCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEE
Confidence            99853 4555554 457999999999999999998889999987653222111             11238999999999


Q ss_pred             EEccCCCCeEEEEeCCCc
Q psy14511        378 TSHGKQDCSLKMWEYPRL  395 (488)
Q Consensus       378 ~~~g~~~~~i~i~d~~~~  395 (488)
                      +  |+.|+.|++||+.++
T Consensus       303 s--g~~Dg~i~vWd~~t~  318 (319)
T 3frx_A          303 A--GYTDNVIRVWQVMTA  318 (319)
T ss_dssp             E--EETTSCEEEEEEEEC
T ss_pred             E--eecCceEEEEEEeec
Confidence            9  889999999998653

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=100.00  E-value=2.1e-38  Score=313.01  Aligned_cols=310  Identities=18%  Similarity=0.265  Sum_probs=233.9

Q ss_pred             eeecccCceEEEEEEccCC-cEEEEec-CCeEEEEeccccCcC--CCcccccccccceeEEEEecCCCeEEeeeCCcccc
Q psy14511         30 TAITREGDVVCGLKWSPNG-RYLASGS-NNTVKIWDFRQLDAK--RPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQ  105 (488)
Q Consensus        30 ~~~~~h~~~V~~l~~sp~g-~~las~~-d~~i~vwd~~~~~~~--~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~  105 (488)
                      ..+.+|.+.|++++|+|++ ++|++|+ |++|++||+.+....  .....+.+|...|.+++|+|++++|++++.   |+
T Consensus       376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~---Dg  452 (694)
T 3dm0_A          376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSW---DG  452 (694)
T ss_dssp             EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEET---TS
T ss_pred             hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeC---CC
Confidence            4578999999999999864 7999998 999999999764322  123457789999999999999988877776   99


Q ss_pred             eEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCC
Q psy14511        106 TVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAK  185 (488)
Q Consensus       106 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (488)
                      +|++||+.++.....+..|...+..+.+++                                                  
T Consensus       453 ~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~--------------------------------------------------  482 (694)
T 3dm0_A          453 ELRLWDLAAGVSTRRFVGHTKDVLSVAFSL--------------------------------------------------  482 (694)
T ss_dssp             EEEEEETTTTEEEEEEECCSSCEEEEEECT--------------------------------------------------
T ss_pred             cEEEEECCCCcceeEEeCCCCCEEEEEEeC--------------------------------------------------
Confidence            999999999988887777654433333222                                                  


Q ss_pred             CceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCC--CeEEEEeCCC
Q psy14511        186 PERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRT--TDLAVTNTCT  263 (488)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~l~~~~~~~  263 (488)
                                           ++..+++++.|+.|++||...............|...|.+++|+|++  ..++++ +.|
T Consensus       483 ---------------------~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~-s~d  540 (694)
T 3dm0_A          483 ---------------------DNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSA-SWD  540 (694)
T ss_dssp             ---------------------TSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEE-ETT
T ss_pred             ---------------------CCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEE-eCC
Confidence                                 23578899999999999987655444333222288899999999987  467777 999


Q ss_pred             CcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEE
Q psy14511        264 EYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLA  341 (488)
Q Consensus       264 ~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~  341 (488)
                      +.|++||+++++....+.+|...|.+++|  ++++|++++.||.|++||+++++ .+..+. +...|.+++|+|++.+|+
T Consensus       541 ~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~-~~~~~~-~~~~v~~~~~sp~~~~l~  618 (694)
T 3dm0_A          541 KTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGK-KLYSLE-ANSVIHALCFSPNRYWLC  618 (694)
T ss_dssp             SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTE-EEECCB-CSSCEEEEEECSSSSEEE
T ss_pred             CeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc-eEEEec-CCCcEEEEEEcCCCcEEE
Confidence            99999999999999999999999999999  68999999999999999999864 333343 446799999999999999


Q ss_pred             EEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEE
Q psy14511        342 SGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVA  421 (488)
Q Consensus       342 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~  421 (488)
                      +++++.|++||+++.+....+...       ......          ..  .. ........+...+++++|||||++|+
T Consensus       619 ~~~~~~i~iwd~~~~~~~~~~~~~-------~~~~~~----------~~--~~-~~~~~~~~~~~~~~~l~~spdg~~l~  678 (694)
T 3dm0_A          619 AATEHGIKIWDLESKSIVEDLKVD-------LKAEAE----------KA--DN-SGPAATKRKVIYCTSLNWSADGSTLF  678 (694)
T ss_dssp             EEETTEEEEEETTTTEEEEEECCC-------CC-----------------------------CCCCEEEEEECTTSSEEE
T ss_pred             EEcCCCEEEEECCCCCChhhhccc-------cccccc----------cc--cc-cccccCCceeEEeeeEEEcCCCCEEE
Confidence            988888999999876322211110       000000          00  00 00001112333588999999999999


Q ss_pred             EEeCCCcEEEEecCC
Q psy14511        422 AASADETISIWNCFP  436 (488)
Q Consensus       422 t~~~dg~v~iw~~~~  436 (488)
                      +|+.||.|++|++..
T Consensus       679 sgs~Dg~i~iW~i~~  693 (694)
T 3dm0_A          679 SGYTDGVIRVWGIGR  693 (694)
T ss_dssp             EEETTSEEEEEEC--
T ss_pred             EEcCCCeEEEEeccC
Confidence            999999999999853

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=100.00  E-value=6e-39  Score=296.35  Aligned_cols=294  Identities=14%  Similarity=0.201  Sum_probs=230.8

Q ss_pred             ceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCc---CCCcccccccccceeEEEEecC----C---CeEEe
Q psy14511         29 PTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDA---KRPQVNNQCHLSAVKAIAWCPW----E---PTLLA   97 (488)
Q Consensus        29 ~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~---~~~~~~~~~h~~~v~~l~~~~~----~---~~l~~   97 (488)
                      ...+.+|.+.|++++|+|  ++|++++ |+.|++||+.+++.   ...+..+.+|...|.+++|+|+    +   ++|++
T Consensus         9 ~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s   86 (397)
T 1sq9_A            9 ANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVAT   86 (397)
T ss_dssp             EEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEE
T ss_pred             hhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEE
Confidence            456789999999999999  7999988 99999999987541   1234556789999999999999    8   88877


Q ss_pred             eeCCcccceEEEEecCCCee-----eeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeee
Q psy14511         98 TGGGICDQTVRLWNSMNGKE-----KCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFL  172 (488)
Q Consensus        98 ~~~~~~d~~i~vwd~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (488)
                      ++.   |+.|++|++.+++.     ...+..+....                                            
T Consensus        87 ~~~---dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------------  119 (397)
T 1sq9_A           87 TSF---SGDLLFYRITREDETKKVIFEKLDLLDSDM--------------------------------------------  119 (397)
T ss_dssp             EET---TSCEEEEEEEECTTTCCEEEEEECCSCTTG--------------------------------------------
T ss_pred             EcC---CCCEEEEEccCCcccccccceeeccccccc--------------------------------------------
Confidence            776   99999999987764     33333331000                                            


Q ss_pred             cccccccccccCCCceeecCCCccccceeeeeeeC------CCc-EEEEECCCeEEEEECCC------CceEE-----EE
Q psy14511        173 RTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG------YHD-TLAVALDTSVYTWNTKT------NKTQL-----LV  234 (488)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~-~~~~~~d~~v~iw~~~~------~~~~~-----~~  234 (488)
                                              ....+.++.|+      ... +++++.|+.|++||+.+      ++...     .+
T Consensus       120 ------------------------~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  175 (397)
T 1sq9_A          120 ------------------------KKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLEL  175 (397)
T ss_dssp             ------------------------GGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEE
T ss_pred             ------------------------CCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCccee
Confidence                                    00112223333      345 77888999999999988      55443     33


Q ss_pred             ec-----CCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecc---c---cccEEEEEe--cCCEEEEee
Q psy14511        235 EY-----PTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRT---H---MHQVIAMCW--NGNLLSCGT  301 (488)
Q Consensus       235 ~~-----~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~---~---~~~v~~~~~--~~~~l~~~~  301 (488)
                      ..     .. +...+.+++|+|++ .++++ +.++.|++||+++++.+..+..   |   ...+.+++|  ++++|++++
T Consensus       176 ~~~~~~~~~-~~~~i~~~~~~~~~-~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~  252 (397)
T 1sq9_A          176 QGTVESPMT-PSQFATSVDISERG-LIATG-FNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAH  252 (397)
T ss_dssp             EEEECCSSS-SCCCCCEEEECTTS-EEEEE-CTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEE
T ss_pred             eeeeccccC-CCCCceEEEECCCc-eEEEE-eCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEe
Confidence            22     23 78899999999999 88888 9999999999999999999988   8   999999999  689999999


Q ss_pred             cC---CeEEEEECcCCCccceeeec-------------CCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccce
Q psy14511        302 IG---GNILHYDVRTHSDYPTAITR-------------EGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGL  364 (488)
Q Consensus       302 ~d---g~i~i~d~~~~~~~~~~~~~-------------~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~  364 (488)
                      .|   +.|++||+++. .....+..             |...|.+++|+|++++|++++ |+.|++||+++.        
T Consensus       253 ~d~~~g~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~--------  323 (397)
T 1sq9_A          253 DSNSFGCITLYETEFG-ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK--------  323 (397)
T ss_dssp             EETTEEEEEEEETTTC-CEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT--------
T ss_pred             cCCCCceEEEEECCCC-cccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC--------
Confidence            99   99999999986 45666777             899999999999999999887 477777776543        


Q ss_pred             eeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEe------ec---------------cccEEEEEEcCCC------
Q psy14511        365 IVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELK------IH---------------QERILSAVLSPDQ------  417 (488)
Q Consensus       365 ~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~------~~---------------~~~v~~~~~s~~~------  417 (488)
                                                     +.+..+.      +|               ...|++++|+|++      
T Consensus       324 -------------------------------~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~  372 (397)
T 1sq9_A          324 -------------------------------ERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMG  372 (397)
T ss_dssp             -------------------------------EEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTT
T ss_pred             -------------------------------ceeEEEecccCcccchhhhhccccccccccCCceeEEEecccccccccc
Confidence                                           3334444      44               8999999999998      


Q ss_pred             ----CEEEEEeCCCcEEEEecCCCC
Q psy14511        418 ----TCVAAASADETISIWNCFPRD  438 (488)
Q Consensus       418 ----~~l~t~~~dg~v~iw~~~~~~  438 (488)
                          ++|++++.||.|++|++.+++
T Consensus       373 ~~~~~~l~s~~~dg~i~iw~~~~g~  397 (397)
T 1sq9_A          373 ADLNESLCCVCLDRSIRWFREAGGK  397 (397)
T ss_dssp             CTTSCEEEEEETTTEEEEEEEEC--
T ss_pred             ccccceEEEecCCCcEEEEEcCCCC
Confidence                799999999999999998763

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.3e-38  Score=279.71  Aligned_cols=296  Identities=15%  Similarity=0.156  Sum_probs=229.3

Q ss_pred             EcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeee
Q psy14511         21 DVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATG   99 (488)
Q Consensus        21 d~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~   99 (488)
                      |..++..+...+.+|.+.|++++| |++++|++++ |+.|++||+.+++   ....+..|...|.+++|+|+++++++++
T Consensus         3 d~~~~~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~   78 (313)
T 3odt_A            3 DPFTGYQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQW---LGTVVYTGQGFLNSVCYDSEKELLLFGG   78 (313)
T ss_dssp             --CCCCEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSE---EEEEEEECSSCEEEEEEETTTTEEEEEE
T ss_pred             CccccHHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCE---EEEEeecCCccEEEEEECCCCCEEEEec
Confidence            444554566778999999999999 9999999998 9999999997643   3444667899999999999999888877


Q ss_pred             CCcccceEEEEecCCCe---eeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccc
Q psy14511        100 GGICDQTVRLWNSMNGK---EKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLG  176 (488)
Q Consensus       100 ~~~~d~~i~vwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (488)
                      .   |+.+++|++....   ....+..+                                                    
T Consensus        79 ~---dg~i~~~~~~~~~~~~~~~~~~~~----------------------------------------------------  103 (313)
T 3odt_A           79 K---DTMINGVPLFATSGEDPLYTLIGH----------------------------------------------------  103 (313)
T ss_dssp             T---TSCEEEEETTCCTTSCC-CEECCC----------------------------------------------------
T ss_pred             C---CCeEEEEEeeecCCCCcccchhhc----------------------------------------------------
Confidence            6   9999999987543   12222111                                                    


Q ss_pred             cccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcC-CCCe
Q psy14511        177 KLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKP-RTTD  255 (488)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~  255 (488)
                                           ...+..+.++++.+++++.|+.|++||  .++....+..   |...+.+++|.| +++.
T Consensus       104 ---------------------~~~i~~~~~~~~~l~~~~~d~~i~~~d--~~~~~~~~~~---~~~~v~~~~~~~~~~~~  157 (313)
T 3odt_A          104 ---------------------QGNVCSLSFQDGVVISGSWDKTAKVWK--EGSLVYNLQA---HNASVWDAKVVSFSENK  157 (313)
T ss_dssp             ---------------------SSCEEEEEEETTEEEEEETTSEEEEEE--TTEEEEEEEC---CSSCEEEEEEEETTTTE
T ss_pred             ---------------------ccCEEEEEecCCEEEEEeCCCCEEEEc--CCcEEEeccc---CCCceeEEEEccCCCCE
Confidence                                 112334555667888899999999999  4444444443   888999999988 8889


Q ss_pred             EEEEeCCCCcEEEEECCcceeeeeecc-ccccEEEEEe-cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEE
Q psy14511        256 LAVTNTCTEYIDLWHEQEERLIQKLRT-HMHQVIAMCW-NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKW  333 (488)
Q Consensus       256 l~~~~~~~~~i~i~d~~~~~~~~~~~~-~~~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~  333 (488)
                      ++++ +.|+.|++||  ..+....+.. |...+.++++ .+..+++++.||.|++||++++ .....+..|...|.+++|
T Consensus       158 l~~~-~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~i~~~~~  233 (313)
T 3odt_A          158 FLTA-SADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTG-DVLRTYEGHESFVYCIKL  233 (313)
T ss_dssp             EEEE-ETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTC-CEEEEEECCSSCEEEEEE
T ss_pred             EEEE-ECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCch-hhhhhhhcCCceEEEEEE
Confidence            9888 9999999999  4456666666 8899999999 3334999999999999999986 467778889999999999


Q ss_pred             ccCCcEEEEEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEE
Q psy14511        334 SPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVL  413 (488)
Q Consensus       334 s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~  413 (488)
                      +|+++ |++++                                      .|+.|++||+.+++++..+..|...|.+++|
T Consensus       234 ~~~~~-l~~~~--------------------------------------~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~  274 (313)
T 3odt_A          234 LPNGD-IVSCG--------------------------------------EDRTVRIWSKENGSLKQVITLPAISIWSVDC  274 (313)
T ss_dssp             CTTSC-EEEEE--------------------------------------TTSEEEEECTTTCCEEEEEECSSSCEEEEEE
T ss_pred             ecCCC-EEEEe--------------------------------------cCCEEEEEECCCCceeEEEeccCceEEEEEE
Confidence            99995 55554                                      2444445555556677888889999999999


Q ss_pred             cCCCCEEEEEeCCCcEEEEecCCCCccccccc
Q psy14511        414 SPDQTCVAAASADETISIWNCFPRDKKRKARQ  445 (488)
Q Consensus       414 s~~~~~l~t~~~dg~v~iw~~~~~~~~~~~~~  445 (488)
                      +|+++ +++++.||.|++|++.+++.......
T Consensus       275 ~~~~~-~~~~~~dg~i~iw~~~~~~~~~~~~~  305 (313)
T 3odt_A          275 MSNGD-IIVGSSDNLVRIFSQEKSRWASEDEI  305 (313)
T ss_dssp             CTTSC-EEEEETTSCEEEEESCGGGCCC----
T ss_pred             ccCCC-EEEEeCCCcEEEEeCCCCceeehhhh
Confidence            99998 66799999999999998877654333

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=100.00  E-value=3.2e-39  Score=294.76  Aligned_cols=297  Identities=16%  Similarity=0.241  Sum_probs=225.5

Q ss_pred             eeecccCceEEEEEEccC---Cc--EEEEecCCeEEEEeccccCcCCCccccc--ccccceeEEEEecC----CCeEEee
Q psy14511         30 TAITREGDVVCGLKWSPN---GR--YLASGSNNTVKIWDFRQLDAKRPQVNNQ--CHLSAVKAIAWCPW----EPTLLAT   98 (488)
Q Consensus        30 ~~~~~h~~~V~~l~~sp~---g~--~las~~d~~i~vwd~~~~~~~~~~~~~~--~h~~~v~~l~~~~~----~~~l~~~   98 (488)
                      ....+|.++|++++|+|+   +.  ++++++++.|++||+.+++....+....  .|...|.+++|+|+    +++++++
T Consensus        12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~   91 (366)
T 3k26_A           12 SLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVA   91 (366)
T ss_dssp             EEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEE
T ss_pred             EeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEe
Confidence            445689999999999984   33  5555568899999998765443332221  26688999999999    5566666


Q ss_pred             eCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccc
Q psy14511         99 GGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKL  178 (488)
Q Consensus        99 ~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (488)
                      +.   |+.|++||+.+++.+..+..+...+..+.+.+.                                          
T Consensus        92 ~~---dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~------------------------------------------  126 (366)
T 3k26_A           92 GS---RGIIRIINPITMQCIKHYVGHGNAINELKFHPR------------------------------------------  126 (366)
T ss_dssp             ET---TCEEEEECTTTCCEEEEEESCCSCEEEEEECSS------------------------------------------
T ss_pred             cC---CCEEEEEEchhceEeeeecCCCCcEEEEEECCC------------------------------------------
Confidence            65   999999999999887777655443332222220                                          


Q ss_pred             cccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEec-CCCCCCceEEEEEcCCCCeEE
Q psy14511        179 PRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEY-PTYDNAYISCVAWKPRTTDLA  257 (488)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~  257 (488)
                                                  ++..+++++.|+.|++||+.+++....+.. .+ |...|.+++|+|++++++
T Consensus       127 ----------------------------~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~  177 (366)
T 3k26_A          127 ----------------------------DPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEG-HRDEVLSADYDLLGEKIM  177 (366)
T ss_dssp             ----------------------------CTTEEEEEETTSCEEEEETTTTEEEEEECSTTS-CSSCEEEEEECTTSSEEE
T ss_pred             ----------------------------CCCEEEEEeCCCeEEEEEeecCeEEEEeccccc-ccCceeEEEECCCCCEEE
Confidence                                        124577788999999999999987776632 33 889999999999999999


Q ss_pred             EEeCCCCcEEEEECCcceeeeeecc----------------------------ccccEEEEEecCCEEEEeecCCeEEEE
Q psy14511        258 VTNTCTEYIDLWHEQEERLIQKLRT----------------------------HMHQVIAMCWNGNLLSCGTIGGNILHY  309 (488)
Q Consensus       258 ~~~~~~~~i~i~d~~~~~~~~~~~~----------------------------~~~~v~~~~~~~~~l~~~~~dg~i~i~  309 (488)
                      ++ +.|+.|++||+++++....+..                            |...|.+++|+++++++++.|+.|++|
T Consensus       178 ~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~w  256 (366)
T 3k26_A          178 SC-GMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCENAIVCW  256 (366)
T ss_dssp             EE-ETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEETTEEEEECSSSEEEEE
T ss_pred             Ee-cCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEcCCEEEEEecCCEEEEE
Confidence            99 8999999999998765544443                            899999999999999999999999999


Q ss_pred             ECcCCCc-------------cceeeecCCccEEEEEEccC--CcEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCC
Q psy14511        310 DVRTHSD-------------YPTAITREGDVVCGLKWSPN--GRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREG  373 (488)
Q Consensus       310 d~~~~~~-------------~~~~~~~~~~~i~~~~~s~~--~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~  373 (488)
                      |+.+...             ....+..|...|.+++|+|+  +++|++++ |+.|++||+.+.+..              
T Consensus       257 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~--------------  322 (366)
T 3k26_A          257 KPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPH--------------  322 (366)
T ss_dssp             EESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGG--------------
T ss_pred             eCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCc--------------
Confidence            9987543             24455667777777888887  77887776 466777766543110              


Q ss_pred             CEEEEEccCCCCeEEEEeCCCcceeEEEeec--cccEEEEEEcCCCCEEEEEeCCCcEEEEecCC
Q psy14511        374 RELVTSHGKQDCSLKMWEYPRLHLIEELKIH--QERILSAVLSPDQTCVAAASADETISIWNCFP  436 (488)
Q Consensus       374 ~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~  436 (488)
                                           ......+.+|  ...|++++|+|++++|++++.||.|++||+.+
T Consensus       323 ---------------------~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~  366 (366)
T 3k26_A          323 ---------------------KAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR  366 (366)
T ss_dssp             ---------------------GCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred             ---------------------cccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence                                 1133466667  78999999999999999999999999999853

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=100.00  E-value=2.4e-38  Score=292.04  Aligned_cols=278  Identities=22%  Similarity=0.394  Sum_probs=219.5

Q ss_pred             ccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccc
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHL   80 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~   80 (488)
                      +|+++.+++++.||.|++||+.+++........|...|.+++|+|++++|++|+ |+.|++||+.+++   .+..+.+|.
T Consensus       100 ~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~~~  176 (401)
T 4aez_A          100 DWSNLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQT---KLRTMAGHQ  176 (401)
T ss_dssp             EECTTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCC---EEEEECCCS
T ss_pred             eecCCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCe---EEEEecCCC
Confidence            567788888999999999999998865444445899999999999999999998 9999999998744   445567899


Q ss_pred             cceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceec
Q psy14511         81 SAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLN  160 (488)
Q Consensus        81 ~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (488)
                      ..|.+++|+  ++.+++++.   |+.|++||+......                                          
T Consensus       177 ~~v~~~~~~--~~~l~~~~~---dg~i~i~d~~~~~~~------------------------------------------  209 (401)
T 4aez_A          177 ARVGCLSWN--RHVLSSGSR---SGAIHHHDVRIANHQ------------------------------------------  209 (401)
T ss_dssp             SCEEEEEEE--TTEEEEEET---TSEEEEEETTSSSCE------------------------------------------
T ss_pred             CceEEEEEC--CCEEEEEcC---CCCEEEEecccCcce------------------------------------------
Confidence            999999995  456666665   999999998743210                                          


Q ss_pred             cccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCC
Q psy14511        161 QSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYD  240 (488)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~  240 (488)
                                                                                            ...  +.+ |
T Consensus       210 ----------------------------------------------------------------------~~~--~~~-~  216 (401)
T 4aez_A          210 ----------------------------------------------------------------------IGT--LQG-H  216 (401)
T ss_dssp             ----------------------------------------------------------------------EEE--EEC-C
T ss_pred             ----------------------------------------------------------------------eeE--EcC-C
Confidence                                                                                  011  112 7


Q ss_pred             CCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEec---CCEEEEee--cCCeEEEEECcCCC
Q psy14511        241 NAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWN---GNLLSCGT--IGGNILHYDVRTHS  315 (488)
Q Consensus       241 ~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~--~dg~i~i~d~~~~~  315 (488)
                      ...|.+++|+|++++++++ +.|+.|++||+++++.+..+..|...+.+++|.   ..++++++  .|+.|++||+.++.
T Consensus       217 ~~~v~~~~~~~~~~~l~s~-~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~  295 (401)
T 4aez_A          217 SSEVCGLAWRSDGLQLASG-GNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGA  295 (401)
T ss_dssp             SSCEEEEEECTTSSEEEEE-ETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCC
T ss_pred             CCCeeEEEEcCCCCEEEEE-eCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCC
Confidence            7899999999999999999 999999999999999999999999999999993   36677765  79999999999864


Q ss_pred             ccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCc
Q psy14511        316 DYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRL  395 (488)
Q Consensus       316 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~  395 (488)
                       ....+. +...|.+++|+|+++++++++                                    |..|+.|++||+.++
T Consensus       296 -~~~~~~-~~~~v~~~~~s~~~~~l~~~~------------------------------------g~~dg~i~v~~~~~~  337 (401)
T 4aez_A          296 -RVNTVD-AGSQVTSLIWSPHSKEIMSTH------------------------------------GFPDNNLSIWSYSSS  337 (401)
T ss_dssp             -EEEEEE-CSSCEEEEEECSSSSEEEEEE------------------------------------CTTTCEEEEEEEETT
T ss_pred             -EEEEEe-CCCcEEEEEECCCCCeEEEEe------------------------------------ecCCCcEEEEecCCc
Confidence             444443 566799999999999998853                                    233444444444443


Q ss_pred             c--eeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccc
Q psy14511        396 H--LIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKR  441 (488)
Q Consensus       396 ~--~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~  441 (488)
                      +  ....+.+|...|.+++|+|++++|++++.||.|++|++.+++...
T Consensus       338 ~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~  385 (401)
T 4aez_A          338 GLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVK  385 (401)
T ss_dssp             EEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC-----
T ss_pred             cceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcccc
Confidence            2  334567899999999999999999999999999999999988664

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=100.00  E-value=4.1e-38  Score=289.23  Aligned_cols=270  Identities=18%  Similarity=0.335  Sum_probs=217.1

Q ss_pred             ccCCceEEEeecCCeEEEEEcccCcccceeecccC------------------ceEEEEEEccCCcEEEEec-CCeEEEE
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREG------------------DVVCGLKWSPNGRYLASGS-NNTVKIW   62 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~------------------~~V~~l~~sp~g~~las~~-d~~i~vw   62 (488)
                      +.||++||+|+ ++.++||++.+++.+ ..+..|.                  ..|.+++|+|+|++||+|+ |+.|+||
T Consensus        73 spdg~~la~g~-~~~v~i~~~~~g~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~d~~i~iw  150 (393)
T 1erj_A           73 SNDGEYLATGC-NKTTQVYRVSDGSLV-ARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIW  150 (393)
T ss_dssp             CTTSSEEEEEC-BSCEEEEETTTCCEE-EEECC-----------------CCCCBEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred             CCCCCEEEEEc-CCcEEEEEecCCCEE-EEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEcCCCeEEEE
Confidence            45999999987 789999999988744 3344332                  2499999999999999998 9999999


Q ss_pred             eccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccce
Q psy14511         63 DFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRR  142 (488)
Q Consensus        63 d~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (488)
                      |+.+++   .+..+.+|...|.+++|+|++++|++++.   |++|++||+.+++....+.....                
T Consensus       151 d~~~~~---~~~~~~~h~~~v~~~~~~p~~~~l~s~s~---d~~v~iwd~~~~~~~~~~~~~~~----------------  208 (393)
T 1erj_A          151 DIENRK---IVMILQGHEQDIYSLDYFPSGDKLVSGSG---DRTVRIWDLRTGQCSLTLSIEDG----------------  208 (393)
T ss_dssp             ETTTTE---EEEEECCCSSCEEEEEECTTSSEEEEEET---TSEEEEEETTTTEEEEEEECSSC----------------
T ss_pred             ECCCCc---EEEEEccCCCCEEEEEEcCCCCEEEEecC---CCcEEEEECCCCeeEEEEEcCCC----------------
Confidence            998743   44557889999999999999998887776   99999999999886655432210                


Q ss_pred             eEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC---CCcEEEEECCCe
Q psy14511        143 HLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG---YHDTLAVALDTS  219 (488)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~  219 (488)
                                                                                +..+.++   +..+++++.|+.
T Consensus       209 ----------------------------------------------------------v~~~~~~~~~~~~l~~~s~d~~  230 (393)
T 1erj_A          209 ----------------------------------------------------------VTTVAVSPGDGKYIAAGSLDRA  230 (393)
T ss_dssp             ----------------------------------------------------------EEEEEECSTTCCEEEEEETTSC
T ss_pred             ----------------------------------------------------------cEEEEEECCCCCEEEEEcCCCc
Confidence                                                                      1112222   245777889999


Q ss_pred             EEEEECCCCceEEEEec-----CCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcc------------eeeeeecc
Q psy14511        220 VYTWNTKTNKTQLLVEY-----PTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEE------------RLIQKLRT  282 (488)
Q Consensus       220 v~iw~~~~~~~~~~~~~-----~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~------------~~~~~~~~  282 (488)
                      |++||+.++.....+..     .+ |...|.+++|+|++++|+++ +.|+.|++||++..            .+...+.+
T Consensus       231 v~iwd~~~~~~~~~~~~~~~~~~~-h~~~v~~v~~~~~g~~l~s~-s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~  308 (393)
T 1erj_A          231 VRVWDSETGFLVERLDSENESGTG-HKDSVYSVVFTRDGQSVVSG-SLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIG  308 (393)
T ss_dssp             EEEEETTTCCEEEEEC------CC-CSSCEEEEEECTTSSEEEEE-ETTSEEEEEEC---------------CEEEEEEC
T ss_pred             EEEEECCCCcEEEeecccccCCCC-CCCCEEEEEECCCCCEEEEE-eCCCEEEEEECCCCCCcccccCCCCCcceEEEec
Confidence            99999999887665532     23 88899999999999999999 99999999998753            34556778


Q ss_pred             ccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEcc------CCcEEEEEe-cCeEEEEEC
Q psy14511        283 HMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSP------NGRYLASGS-NNTVKIWDF  353 (488)
Q Consensus       283 ~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~------~~~~l~~~~-d~~i~iwd~  353 (488)
                      |...|.++++  ++++|++|+.|+.|++||++++ .....+.+|...|.+++|+|      ++++|++++ |+.|++|++
T Consensus       309 h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~-~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~  387 (393)
T 1erj_A          309 HKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSG-NPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKY  387 (393)
T ss_dssp             CSSCEEEEEECGGGCEEEEEETTSEEEEEETTTC-CEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEE
T ss_pred             ccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCC-eEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcc
Confidence            9999999999  6899999999999999999986 46778889999999999986      688999998 699999998


Q ss_pred             CCC
Q psy14511        354 RQL  356 (488)
Q Consensus       354 ~~~  356 (488)
                      ...
T Consensus       388 ~~~  390 (393)
T 1erj_A          388 KKI  390 (393)
T ss_dssp             EEC
T ss_pred             ccc
Confidence            643

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=100.00  E-value=4.7e-39  Score=294.41  Aligned_cols=321  Identities=11%  Similarity=0.150  Sum_probs=240.3

Q ss_pred             eecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEE
Q psy14511         31 AITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRL  109 (488)
Q Consensus        31 ~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~v  109 (488)
                      .+..|.++|++++|+|++++|++++ |+.|++||+.+++ ...+..+.+|...|.+++|+|+++++++++.   |+.|++
T Consensus         3 ~~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~---dg~i~v   78 (372)
T 1k8k_C            3 YHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNK-WVQVHELKEHNGQVTGVDWAPDSNRIVTCGT---DRNAYV   78 (372)
T ss_dssp             EEESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTE-EEEEEEEECCSSCEEEEEEETTTTEEEEEET---TSCEEE
T ss_pred             eecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCc-EEeeeeecCCCCcccEEEEeCCCCEEEEEcC---CCeEEE
Confidence            3556999999999999999999997 9999999998743 1245557789999999999999998887776   999999


Q ss_pred             EecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCcee
Q psy14511        110 WNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERI  189 (488)
Q Consensus       110 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (488)
                      ||+.+++..........                                                               
T Consensus        79 wd~~~~~~~~~~~~~~~---------------------------------------------------------------   95 (372)
T 1k8k_C           79 WTLKGRTWKPTLVILRI---------------------------------------------------------------   95 (372)
T ss_dssp             EEEETTEEEEEEECCCC---------------------------------------------------------------
T ss_pred             EECCCCeeeeeEEeecC---------------------------------------------------------------
Confidence            99988765443322110                                                               


Q ss_pred             ecCCCccccceeeeeeeC--CCcEEEEECCCeEEEEECCCCceEEE-EecCCCCCCceEEEEEcCCCCeEEEEeCCCCcE
Q psy14511        190 LEAPSIINDFYTSGLDWG--YHDTLAVALDTSVYTWNTKTNKTQLL-VEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYI  266 (488)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~v~iw~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i  266 (488)
                              ...+..+.|+  +..+++++.|+.|++||+..+..... ......|...|.+++|+|++++++++ +.|+.|
T Consensus        96 --------~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i  166 (372)
T 1k8k_C           96 --------NRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAG-SCDFKC  166 (372)
T ss_dssp             --------SSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEE-ETTSCE
T ss_pred             --------CCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEE-cCCCCE
Confidence                    0112223333  34677788999999999998763221 12222278899999999999999999 899999


Q ss_pred             EEEEC------------------CcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCc
Q psy14511        267 DLWHE------------------QEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGD  326 (488)
Q Consensus       267 ~i~d~------------------~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~  326 (488)
                      ++||+                  ..++.+..+..|...+.+++|  ++++|++++.|+.|++||++++ .....+..|..
T Consensus       167 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~  245 (372)
T 1k8k_C          167 RIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKK-MAVATLASETL  245 (372)
T ss_dssp             EEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGT-TEEEEEECSSC
T ss_pred             EEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCC-ceeEEEccCCC
Confidence            99995                  367788888899999999999  6889999999999999999986 46777888999


Q ss_pred             cEEEEEEccCCcEEEEEecCeEEEEECCC--CC--CCcccceeeeeecCCCCEEEEEccCCCCeEEEE---eCCCccee-
Q psy14511        327 VVCGLKWSPNGRYLASGSNNTVKIWDFRQ--LD--AKRPLGLIVPKLKREGRELVTSHGKQDCSLKMW---EYPRLHLI-  398 (488)
Q Consensus       327 ~i~~~~~s~~~~~l~~~~d~~i~iwd~~~--~~--~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~---d~~~~~~~-  398 (488)
                      +|.+++|+|++++|+++.|+.|++|++.+  +.  ....+..       ...  ..  ......+++|   +.. ++.. 
T Consensus       246 ~v~~~~~~~~~~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~-------~~~--~~--~~~~~~~~~~~~~~~~-~~~~~  313 (372)
T 1k8k_C          246 PLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDV-------PKQ--SS--QRGLTARERFQNLDKK-ASSEG  313 (372)
T ss_dssp             CEEEEEEEETTEEEEEETTSSCEEEEEETTTTEEEECCCCCC-------C------------CHHHHHHHCCCC-C----
T ss_pred             CeEEEEEecCCCEEEEEeCCeEEEEEccCcCceEEEeeccCc-------ccc--ch--hhhcchhhhhhhcccc-ccccc
Confidence            99999999999999999889999999986  31  0000000       000  00  1112224444   322 2221 


Q ss_pred             -----EEE-eeccccEEEEEEc-CCC---CEEEEEeCCCcEEEEecCCCCcc
Q psy14511        399 -----EEL-KIHQERILSAVLS-PDQ---TCVAAASADETISIWNCFPRDKK  440 (488)
Q Consensus       399 -----~~~-~~~~~~v~~~~~s-~~~---~~l~t~~~dg~v~iw~~~~~~~~  440 (488)
                           ..+ .+|..+|++++|+ ++|   ++|++++.||.|++|++.+++..
T Consensus       314 ~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~~~  365 (372)
T 1k8k_C          314 SAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLESA  365 (372)
T ss_dssp             -----CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHHHH
T ss_pred             CccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChhHh
Confidence                 233 4899999999966 666   99999999999999999876543

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=100.00  E-value=6.3e-39  Score=298.47  Aligned_cols=312  Identities=11%  Similarity=0.105  Sum_probs=243.0

Q ss_pred             eEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCe
Q psy14511         38 VVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGK  116 (488)
Q Consensus        38 ~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~  116 (488)
                      .+++++|+|+|++|++++ |+.|++||+.+++...   .+..| ..+....|+|+++++++++.   |+.|++||+.+++
T Consensus        58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~---~~~~~-~~~~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~  130 (420)
T 3vl1_A           58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSK---MLKRA-DYTAVDTAKLQMRRFILGTT---EGDIKVLDSNFNL  130 (420)
T ss_dssp             CCTTCEEEEEETTEEEEEETTEEEEEECCSEETTT---TSCSC-CEEEEEEECSSSCEEEEEET---TSCEEEECTTSCE
T ss_pred             cccceeeeecCCeEEEEEcCCcEEEEEecccceee---EEecC-CceEEEEEecCCCEEEEEEC---CCCEEEEeCCCcc
Confidence            345799999999999998 9999999998755433   23445 44555678999988777766   9999999987655


Q ss_pred             eeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCcc
Q psy14511        117 EKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSII  196 (488)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (488)
                      ....                                                                            
T Consensus       131 ~~~~----------------------------------------------------------------------------  134 (420)
T 3vl1_A          131 QREI----------------------------------------------------------------------------  134 (420)
T ss_dssp             EEEE----------------------------------------------------------------------------
T ss_pred             eeee----------------------------------------------------------------------------
Confidence            3211                                                                            


Q ss_pred             ccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCccee
Q psy14511        197 NDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERL  276 (488)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~  276 (488)
                                                             +.+ |...|++++|+|++++|+++ +.|+.|++||+.+++.
T Consensus       135 ---------------------------------------~~~-h~~~v~~~~~~~~~~~l~s~-s~d~~i~iwd~~~~~~  173 (420)
T 3vl1_A          135 ---------------------------------------DQA-HVSEITKLKFFPSGEALISS-SQDMQLKIWSVKDGSN  173 (420)
T ss_dssp             ---------------------------------------TTS-SSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTCCC
T ss_pred             ---------------------------------------ccc-ccCccEEEEECCCCCEEEEE-eCCCeEEEEeCCCCcC
Confidence                                                   112 78899999999999999999 9999999999999999


Q ss_pred             eeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeec---CCccEEE---------------------
Q psy14511        277 IQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITR---EGDVVCG---------------------  330 (488)
Q Consensus       277 ~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~---~~~~i~~---------------------  330 (488)
                      +..+.+|...|.+++|  +++.|++++.|+.|++||+++++ ....+..   +...+.+                     
T Consensus       174 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~  252 (420)
T 3vl1_A          174 PRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGT-TIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNN  252 (420)
T ss_dssp             CEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE-EEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCT
T ss_pred             ceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCc-eeEEeecCCCCCCCccEEEEecCCcceeeecccCcccc
Confidence            9999999999999999  68999999999999999998764 4444443   3344444                     


Q ss_pred             EEEccCCcEEEEEe-cCeEEEEECCCCCCCcccce------eeeeecCCCC-EEEEEccCCCCeEEEEeCCCcc-eeEEE
Q psy14511        331 LKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGL------IVPKLKREGR-ELVTSHGKQDCSLKMWEYPRLH-LIEEL  401 (488)
Q Consensus       331 ~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~------~~~~~~~~~~-~l~~~~g~~~~~i~i~d~~~~~-~~~~~  401 (488)
                      ++|+|++++|++++ |+.|++||+++.+....+..      ...+|+|+++ ++++  |+.||.|++||+.+++ ++..+
T Consensus       253 ~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~--g~~dg~i~vwd~~~~~~~~~~~  330 (420)
T 3vl1_A          253 LEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYA--GYENGMLAQWDLRSPECPVGEF  330 (420)
T ss_dssp             TCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEE--EETTSEEEEEETTCTTSCSEEE
T ss_pred             eEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEE--EeCCCeEEEEEcCCCcCchhhh
Confidence            45578999999999 69999999988754333321      1229999999 8888  7899999999999875 47777


Q ss_pred             ee-ccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCc----------cccccccCCcceEEeecCCC---ceEEEEee
Q psy14511        402 KI-HQERILSAVLSPDQTCVAAASADETISIWNCFPRDK----------KRKARQVGSGSSLEFAILKQ---PVSLTALL  467 (488)
Q Consensus       402 ~~-~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~----------~~~~~~~~~v~~~~~s~~~~---~~~~~~~~  467 (488)
                      .+ |...|.++.+ |++++|++++.||.|++|++..++.          .....+.+.+.+++|+|+++   .+...+  
T Consensus       331 ~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g--  407 (420)
T 3vl1_A          331 LINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVG--  407 (420)
T ss_dssp             EESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEE--
T ss_pred             hccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEc--
Confidence            77 5667888855 6889999999999999999987422          23456788899999999998   443322  


Q ss_pred             ecccccceeeEEEEeec
Q psy14511        468 RSRAVEKQQHAIAYTVF  484 (488)
Q Consensus       468 ~~~~~~~~~~~i~~~~~  484 (488)
                           .+....++..++
T Consensus       408 -----~~g~~~~~~~~~  419 (420)
T 3vl1_A          408 -----KNNFCALYNLSN  419 (420)
T ss_dssp             -----TTTEEEEEESCC
T ss_pred             -----CCceEEEEeccC
Confidence                 334556665543

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=100.00  E-value=1.4e-37  Score=288.53  Aligned_cols=284  Identities=24%  Similarity=0.452  Sum_probs=229.5

Q ss_pred             eEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCee
Q psy14511         38 VVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKE  117 (488)
Q Consensus        38 ~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~  117 (488)
                      .++.|+||++ ++||+|.|++|+|||..+++... +..+.+|...|++|+|+|+|++|++++.   |++|++||+.+++.
T Consensus       107 y~~~l~wS~~-n~lAvgld~tV~lWd~~tg~~~~-~~~~~~~~~~V~sv~fspdg~~lasgs~---Dg~v~iWd~~~~~~  181 (420)
T 4gga_A          107 YLNLVDWSSG-NVLAVALDNSVYLWSASSGDILQ-LLQMEQPGEYISSVAWIKEGNYLAVGTS---SAEVQLWDVQQQKR  181 (420)
T ss_dssp             TCBCEEECTT-SEEEEEETTEEEEEETTTCCEEE-EEECCSTTCCEEEEEECTTSSEEEEEET---TSCEEEEETTTTEE
T ss_pred             cceeEEECCC-CEEEEEeCCEEEEEECCCCCEEE-EEEecCCCCcEEEEEECCCCCEEEEEEC---CCeEEEEEcCCCcE
Confidence            4567999975 58888889999999999876443 3345678889999999999998777776   99999999999998


Q ss_pred             eeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccc
Q psy14511        118 KCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIIN  197 (488)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (488)
                      +..+..+...                                                                      
T Consensus       182 ~~~~~~h~~~----------------------------------------------------------------------  191 (420)
T 4gga_A          182 LRNMTSHSAR----------------------------------------------------------------------  191 (420)
T ss_dssp             EEEECCCSSC----------------------------------------------------------------------
T ss_pred             EEEEeCCCCc----------------------------------------------------------------------
Confidence            8777665321                                                                      


Q ss_pred             cceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcce--
Q psy14511        198 DFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEER--  275 (488)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~--  275 (488)
                         +.++.+++..+++++.|+.+++||........ ..+.+ |...+..+.++|++++++++ +.|+.+++|+...++  
T Consensus       192 ---v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~-~~~~~-h~~~~~~~~~~~~g~~l~s~-~~D~~v~i~~~~~~~~~  265 (420)
T 4gga_A          192 ---VGSLSWNSYILSSGSRSGHIHHHDVRVAEHHV-ATLSG-HSQEVCGLRWAPDGRHLASG-GNDNLVNVWPSAPGEGG  265 (420)
T ss_dssp             ---EEEEEEETTEEEEEETTSEEEEEETTSSSCEE-EEEEC-CSSCEEEEEECTTSSEEEEE-ETTSCEEEEESSCCSSC
T ss_pred             ---eEEEeeCCCEEEEEeCCCceeEeeecccceee-EEecc-cccceeeeeecCCCCeeeee-eccccceEEeecccccc
Confidence               22344555678888899999999988755332 22333 88999999999999999999 999999999998754  


Q ss_pred             --eeeeeccccccEEEEEe---cCCEEEE--eecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeE
Q psy14511        276 --LIQKLRTHMHQVIAMCW---NGNLLSC--GTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTV  348 (488)
Q Consensus       276 --~~~~~~~~~~~v~~~~~---~~~~l~~--~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i  348 (488)
                        .+.....|...|.+++|   ++..+++  |+.|+.|++||+.++. ....+..+ ..+.++.|+|+++.+++++    
T Consensus       266 ~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~-~~~~~~~~-~~v~~~~~~~~~~~lv~~s----  339 (420)
T 4gga_A          266 WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA-CLSAVDAH-SQVCSILWSPHYKELISGH----  339 (420)
T ss_dssp             SCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTE-EEEEEECS-SCEEEEEEETTTTEEEEEE----
T ss_pred             ceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccc-cceeeccc-cceeeeeecCCCCeEEEEE----
Confidence              34566778999999999   3566665  4579999999999864 44445444 4588888998888877664    


Q ss_pred             EEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCc
Q psy14511        349 KIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADET  428 (488)
Q Consensus       349 ~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~  428 (488)
                                                      |..|+.|++||+.+++++.++.+|.+.|++++|+|||++||||+.|++
T Consensus       340 --------------------------------g~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~t  387 (420)
T 4gga_A          340 --------------------------------GFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADET  387 (420)
T ss_dssp             --------------------------------CTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTE
T ss_pred             --------------------------------ecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCe
Confidence                                            567888888888889999999999999999999999999999999999


Q ss_pred             EEEEecCCCCcc
Q psy14511        429 ISIWNCFPRDKK  440 (488)
Q Consensus       429 v~iw~~~~~~~~  440 (488)
                      |++||+.+..+.
T Consensus       388 vriWdv~~~~~~  399 (420)
T 4gga_A          388 LRLWRCFELDPA  399 (420)
T ss_dssp             EEEECCSCSSCC
T ss_pred             EEEEECCCCCcc
Confidence            999999876655

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=100.00  E-value=2.8e-39  Score=296.33  Aligned_cols=315  Identities=12%  Similarity=0.142  Sum_probs=219.6

Q ss_pred             cCCceEEEeecCCeEEEEEcccCc-ccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccc
Q psy14511          3 WNGNLLSCGTIGGNILHYDVRTHS-DYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHL   80 (488)
Q Consensus         3 ~dg~~la~g~~dg~i~iwd~~~~~-~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~   80 (488)
                      .||++||+|+.||.|+|||+.++. .....+.+|...|.+++|+|++++|++++ |+.|++||+.+++.......+.+|.
T Consensus        21 ~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~  100 (377)
T 3dwl_C           21 SQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLN  100 (377)
T ss_dssp             SSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCS
T ss_pred             CCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccC
Confidence            489999999999999999999873 34567889999999999999999999998 9999999998865344555677899


Q ss_pred             cceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceec
Q psy14511         81 SAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLN  160 (488)
Q Consensus        81 ~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (488)
                      ..|.+++|+|+++++++++.   |+.|++||+.+++....                                        
T Consensus       101 ~~v~~~~~~~~~~~l~~~~~---d~~i~iwd~~~~~~~~~----------------------------------------  137 (377)
T 3dwl_C          101 RAATFVRWSPNEDKFAVGSG---ARVISVCYFEQENDWWV----------------------------------------  137 (377)
T ss_dssp             SCEEEEECCTTSSCCEEEES---SSCEEECCC-----CCC----------------------------------------
T ss_pred             CceEEEEECCCCCEEEEEec---CCeEEEEEECCccccee----------------------------------------
Confidence            99999999999998887776   99999999976642100                                        


Q ss_pred             cccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCC
Q psy14511        161 QSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYD  240 (488)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~  240 (488)
                                                                                            ...+.  ..|
T Consensus       138 ----------------------------------------------------------------------~~~~~--~~h  145 (377)
T 3dwl_C          138 ----------------------------------------------------------------------SKHLK--RPL  145 (377)
T ss_dssp             ----------------------------------------------------------------------CEEEC--SSC
T ss_pred             ----------------------------------------------------------------------eeEee--ccc
Confidence                                                                                  00011  116


Q ss_pred             CCceEEEEEcCCCCeEEEEeCCCCcEEEEECC------------------cceeeeeeccccccEEEEEe--cCCEEEEe
Q psy14511        241 NAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQ------------------EERLIQKLRTHMHQVIAMCW--NGNLLSCG  300 (488)
Q Consensus       241 ~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~------------------~~~~~~~~~~~~~~v~~~~~--~~~~l~~~  300 (488)
                      ...|.+++|+|++++++++ +.|+.|++||+.                  .++++..+ .|...|.+++|  ++++|+++
T Consensus       146 ~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~  223 (377)
T 3dwl_C          146 RSTILSLDWHPNNVLLAAG-CADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYA  223 (377)
T ss_dssp             CSCEEEEEECTTSSEEEEE-ESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEE
T ss_pred             CCCeEEEEEcCCCCEEEEE-eCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEE
Confidence            7789999999999999999 999999999984                  45666777 89999999999  78999999


Q ss_pred             ecCCeEEEEECcCCCcc---ceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCC--Ccccceeee--eec--C
Q psy14511        301 TIGGNILHYDVRTHSDY---PTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDA--KRPLGLIVP--KLK--R  371 (488)
Q Consensus       301 ~~dg~i~i~d~~~~~~~---~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~--~~~~~~~~~--~~~--~  371 (488)
                      +.||.|++||++++...   ...+..|..+|.+++|+|++++|++++++.+.+|+......  ...+.....  ...  +
T Consensus       224 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (377)
T 3dwl_C          224 GHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQGNESGWAHTRDLDAGTSKTSFTHTG  303 (377)
T ss_dssp             ETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEEEECCCC---CCSBCCCSCCCCCCBSSSS
T ss_pred             eCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEEEEEeCCCceEEEeeeccccccccccccc
Confidence            99999999999986531   67788999999999999999999999986666888763321  111110000  000  0


Q ss_pred             C---CC--EEEEEccCCCCeEEEEeCCC--cceeEEEeeccccEEEEEEcCCC-C---EEEEEeCCCcEEEEec
Q psy14511        372 E---GR--ELVTSHGKQDCSLKMWEYPR--LHLIEELKIHQERILSAVLSPDQ-T---CVAAASADETISIWNC  434 (488)
Q Consensus       372 ~---~~--~l~~~~g~~~~~i~i~d~~~--~~~~~~~~~~~~~v~~~~~s~~~-~---~l~t~~~dg~v~iw~~  434 (488)
                      .   +.  .-+..........+..+...  .........|.+.|+++++.+.. .   .|+|++.||.|++||+
T Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl  377 (377)
T 3dwl_C          304 NTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL  377 (377)
T ss_dssp             SBCCCCCC-------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred             ccccccccccccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence            0   00  00000000001111111110  01112234599999999976644 3   6999999999999985

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=100.00  E-value=1.5e-37  Score=280.28  Aligned_cols=278  Identities=16%  Similarity=0.259  Sum_probs=204.4

Q ss_pred             CCceEEEeecCCeEEEEEcccCcc------cceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSD------YPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNN   76 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~------~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~   76 (488)
                      |+++||+|+.|++|+|||+...+.      ....+.+|...|.+++|+|++++|++++ |++|++||+.+++   .+..+
T Consensus        38 d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~---~~~~~  114 (343)
T 2xzm_R           38 DSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGT---TYKRF  114 (343)
T ss_dssp             CCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSC---EEEEE
T ss_pred             CCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCc---EEEEE
Confidence            889999999999999999976431      2346789999999999999999999998 9999999998754   44567


Q ss_pred             cccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeee---cCCCccccccccccccccceeEEEEEeeeec
Q psy14511         77 QCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVK---TDSQQANDETISYREQKKRRHLSFLLHGFEI  153 (488)
Q Consensus        77 ~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (488)
                      .+|...|.+++|+|+++++++++.   |++|++||+.... .....   .+...+..+.+.+....              
T Consensus       115 ~~h~~~v~~v~~sp~~~~l~s~~~---d~~i~~wd~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~--------------  176 (343)
T 2xzm_R          115 VGHQSEVYSVAFSPDNRQILSAGA---EREIKLWNILGEC-KFSSAEKENHSDWVSCVRYSPIMKS--------------  176 (343)
T ss_dssp             ECCCSCEEEEEECSSTTEEEEEET---TSCEEEEESSSCE-EEECCTTTSCSSCEEEEEECCCCCS--------------
T ss_pred             cCCCCcEEEEEECCCCCEEEEEcC---CCEEEEEeccCCc-eeeeecccCCCceeeeeeecccccc--------------
Confidence            889999999999999998888776   9999999987432 22111   11111111111110000              


Q ss_pred             cccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEE
Q psy14511        154 DRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLL  233 (488)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~  233 (488)
                                                                     ...+......+++++.|+.|++||.. .+....
T Consensus       177 -----------------------------------------------~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~  208 (343)
T 2xzm_R          177 -----------------------------------------------ANKVQPFAPYFASVGWDGRLKVWNTN-FQIRYT  208 (343)
T ss_dssp             -----------------------------------------------CSCCCSSCCEEEEEETTSEEEEEETT-TEEEEE
T ss_pred             -----------------------------------------------ccccCCCCCEEEEEcCCCEEEEEcCC-CceeEE
Confidence                                                           00000112457888899999999943 333333


Q ss_pred             EecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcc-eeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEE
Q psy14511        234 VEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEE-RLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYD  310 (488)
Q Consensus       234 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~-~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d  310 (488)
                      +  .+ |...|.+++|+|++++|+++ +.|+.|++||+... .....+ .+...|.+++|  ++.+++ ++.|+.+++||
T Consensus       209 ~--~~-h~~~v~~~~~s~~g~~l~sg-s~dg~v~iwd~~~~~~~~~~~-~~~~~v~~v~~sp~~~~la-~~~d~~v~iw~  282 (343)
T 2xzm_R          209 F--KA-HESNVNHLSISPNGKYIATG-GKDKKLLIWDILNLTYPQREF-DAGSTINQIAFNPKLQWVA-VGTDQGVKIFN  282 (343)
T ss_dssp             E--EC-CSSCEEEEEECTTSSEEEEE-ETTCEEEEEESSCCSSCSEEE-ECSSCEEEEEECSSSCEEE-EEESSCEEEEE
T ss_pred             E--cC-ccccceEEEECCCCCEEEEE-cCCCeEEEEECCCCcccceee-cCCCcEEEEEECCCCCEEE-EECCCCEEEEE
Confidence            3  33 88999999999999999999 99999999999543 333333 34567999999  456555 55688899999


Q ss_pred             CcCCCccc-eee-----------ecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCC
Q psy14511        311 VRTHSDYP-TAI-----------TREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQL  356 (488)
Q Consensus       311 ~~~~~~~~-~~~-----------~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~  356 (488)
                      +.+..... ..+           .+|...|.+++|+|+|++|++++ ||.|++|+++++
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g  341 (343)
T 2xzm_R          283 LMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETS  341 (343)
T ss_dssp             SSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEE
T ss_pred             eCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEcc
Confidence            98754221 122           26778899999999999999999 699999998654

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=100.00  E-value=2.6e-38  Score=287.71  Aligned_cols=288  Identities=15%  Similarity=0.254  Sum_probs=227.1

Q ss_pred             cccceeecccCceEEEEEEccCCcEE-EEec----CCeEEEEeccccCcCCCcccccccccceeEEEEecC---CCeEEe
Q psy14511         26 SDYPTAITREGDVVCGLKWSPNGRYL-ASGS----NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPW---EPTLLA   97 (488)
Q Consensus        26 ~~~~~~~~~h~~~V~~l~~sp~g~~l-as~~----d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~---~~~l~~   97 (488)
                      +.+...+.+|...|.+++|+|+++.| ++++    |+.|++||+.+++...  ....+|...|.+++|+|+   ++++++
T Consensus         8 ~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~l~~   85 (357)
T 3i2n_A            8 QIIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKL--LREIEKAKPIKCGTFGATSLQQRYLAT   85 (357)
T ss_dssp             CEEEEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEE--EEEEEESSCEEEEECTTCCTTTCCEEE
T ss_pred             HHhhhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccc--eeeecccCcEEEEEEcCCCCCCceEEE
Confidence            33445667899999999999999655 5553    7999999998754322  113368999999999998   577777


Q ss_pred             eeCCcccceEEEEecCCCe-eeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccc
Q psy14511         98 TGGGICDQTVRLWNSMNGK-EKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLG  176 (488)
Q Consensus        98 ~~~~~~d~~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (488)
                      ++.   |+.|++||+.+++ ....+                                                       
T Consensus        86 ~~~---dg~i~iwd~~~~~~~~~~~-------------------------------------------------------  107 (357)
T 3i2n_A           86 GDF---GGNLHIWNLEAPEMPVYSV-------------------------------------------------------  107 (357)
T ss_dssp             EET---TSCEEEECTTSCSSCSEEE-------------------------------------------------------
T ss_pred             ecC---CCeEEEEeCCCCCccEEEE-------------------------------------------------------
Confidence            666   9999999997664 21111                                                       


Q ss_pred             cccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEE------Ec
Q psy14511        177 KLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVA------WK  250 (488)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~------~~  250 (488)
                                                                                  .+ |...|.+++      |+
T Consensus       108 ------------------------------------------------------------~~-~~~~v~~~~~~~~~~~s  126 (357)
T 3i2n_A          108 ------------------------------------------------------------KG-HKEIINAIDGIGGLGIG  126 (357)
T ss_dssp             ------------------------------------------------------------CC-CSSCEEEEEEESGGGCC
T ss_pred             ------------------------------------------------------------Ee-cccceEEEeeccccccC
Confidence                                                                        11 677788884      57


Q ss_pred             CCCCeEEEEeCCCCcEEEEECCcce-eeeeeccccc----cEEEEE----e--cCCEEEEeecCCeEEEEECcCCCccce
Q psy14511        251 PRTTDLAVTNTCTEYIDLWHEQEER-LIQKLRTHMH----QVIAMC----W--NGNLLSCGTIGGNILHYDVRTHSDYPT  319 (488)
Q Consensus       251 ~~~~~l~~~~~~~~~i~i~d~~~~~-~~~~~~~~~~----~v~~~~----~--~~~~l~~~~~dg~i~i~d~~~~~~~~~  319 (488)
                      |+++.++++ +.|+.|++||+++++ .+..+..|..    .+.++.    |  +++++++++.||.|++||+++..  ..
T Consensus       127 ~~~~~l~~~-~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~--~~  203 (357)
T 3i2n_A          127 EGAPEIVTG-SRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMA--LR  203 (357)
T ss_dssp             -CCCEEEEE-ETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTE--EE
T ss_pred             CCccEEEEE-eCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCc--ee
Confidence            899999999 999999999999876 6677765544    788888    3  78999999999999999999864  24


Q ss_pred             eeecCCccEEEEEEcc---CCcEEEEEe-cCeEEEEECCCCCCCcccc-----ee-----eeeecCCCC-EEEEEccCCC
Q psy14511        320 AITREGDVVCGLKWSP---NGRYLASGS-NNTVKIWDFRQLDAKRPLG-----LI-----VPKLKREGR-ELVTSHGKQD  384 (488)
Q Consensus       320 ~~~~~~~~i~~~~~s~---~~~~l~~~~-d~~i~iwd~~~~~~~~~~~-----~~-----~~~~~~~~~-~l~~~~g~~~  384 (488)
                      ....|...|.+++|+|   ++.+|++++ |+.|++||+++.+....+.     ..     ..+|+|+++ ++++  ++.|
T Consensus       204 ~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~--~~~d  281 (357)
T 3i2n_A          204 WETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLT--AGGA  281 (357)
T ss_dssp             EEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEE--EETT
T ss_pred             eecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEE--EeCC
Confidence            5577888999999999   999999999 6999999998775544332     11     128999999 6777  7889


Q ss_pred             CeEEEEeCCCc-------------------ceeEEEeeccccEEEEEEcCCCCEEE-EEeCCCcEEEEecCCCCc
Q psy14511        385 CSLKMWEYPRL-------------------HLIEELKIHQERILSAVLSPDQTCVA-AASADETISIWNCFPRDK  439 (488)
Q Consensus       385 ~~i~i~d~~~~-------------------~~~~~~~~~~~~v~~~~~s~~~~~l~-t~~~dg~v~iw~~~~~~~  439 (488)
                      +.|++||+.++                   +.+..+.+|...|++++|+|++++|+ +++.||.|++||+.+.+.
T Consensus       282 g~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~  356 (357)
T 3i2n_A          282 GGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK  356 (357)
T ss_dssp             SEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred             CcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence            99999999753                   46778889999999999999999998 899999999999987653

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=100.00  E-value=2.1e-37  Score=291.95  Aligned_cols=296  Identities=17%  Similarity=0.278  Sum_probs=236.6

Q ss_pred             ceeecccCceE-EEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccce
Q psy14511         29 PTAITREGDVV-CGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQT  106 (488)
Q Consensus        29 ~~~~~~h~~~V-~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~  106 (488)
                      ...+.+|...| .++.+  ++++|++|+ |+.|++||+.+++   .+..+.+|.+.|.+++|+|++ .+++++.   |++
T Consensus       114 ~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~---~~~~~~~h~~~V~~l~~~~~~-~l~s~s~---dg~  184 (464)
T 3v7d_B          114 RTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKK---FLLQLSGHDGGVWALKYAHGG-ILVSGST---DRT  184 (464)
T ss_dssp             EEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTE---EEEEECCCSSCEEEEEECSTT-EEEEEET---TSC
T ss_pred             eEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCc---EEEEEeCCCcCEEEEEEcCCC-EEEEEeC---CCC
Confidence            35678898875 65555  578999998 9999999998754   455577899999999999988 6666665   999


Q ss_pred             EEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCC
Q psy14511        107 VRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKP  186 (488)
Q Consensus       107 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (488)
                      |++||+.+++....+..                                                               
T Consensus       185 i~vwd~~~~~~~~~~~~---------------------------------------------------------------  201 (464)
T 3v7d_B          185 VRVWDIKKGCCTHVFEG---------------------------------------------------------------  201 (464)
T ss_dssp             EEEEETTTTEEEEEECC---------------------------------------------------------------
T ss_pred             EEEEECCCCcEEEEECC---------------------------------------------------------------
Confidence            99999988775443332                                                               


Q ss_pred             ceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEc--CCCCeEEEEeCCCC
Q psy14511        187 ERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWK--PRTTDLAVTNTCTE  264 (488)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~l~~~~~~~~  264 (488)
                                                                           |...|.+++|+  +++++++++ +.|+
T Consensus       202 -----------------------------------------------------h~~~v~~l~~~~~~~~~~l~s~-s~d~  227 (464)
T 3v7d_B          202 -----------------------------------------------------HNSTVRCLDIVEYKNIKYIVTG-SRDN  227 (464)
T ss_dssp             -----------------------------------------------------CSSCEEEEEEEESSSCEEEEEE-ETTS
T ss_pred             -----------------------------------------------------CCCccEEEEEecCCCCCEEEEE-cCCC
Confidence                                                                 55566666665  355556666 6666


Q ss_pred             cEEEEECCcce-----------------------eeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCccceee
Q psy14511        265 YIDLWHEQEER-----------------------LIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAI  321 (488)
Q Consensus       265 ~i~i~d~~~~~-----------------------~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~  321 (488)
                      .|++||+.++.                       .+..+.+|...+.++..+++.+++++.||.|++||+++. .....+
T Consensus       228 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~-~~~~~~  306 (464)
T 3v7d_B          228 TLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQM-KCLYIL  306 (464)
T ss_dssp             CEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTT-EEEEEE
T ss_pred             cEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCC-cEEEEe
Confidence            77777665543                       245677899999999999999999999999999999875 567778


Q ss_pred             ecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCccccee---eeeecCCCCEEEEEccCCCCeEEEEeCCCcce
Q psy14511        322 TREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLI---VPKLKREGRELVTSHGKQDCSLKMWEYPRLHL  397 (488)
Q Consensus       322 ~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~  397 (488)
                      .+|...|.+++|+|+++++++++ |+.|++||+++++....+...   +..+..+++++++  ++.|+.|++||+.+++.
T Consensus       307 ~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s--~s~dg~v~vwd~~~~~~  384 (464)
T 3v7d_B          307 SGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVS--AAADGSIRGWDANDYSR  384 (464)
T ss_dssp             CCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSEEEE--EETTSEEEEEETTTCCE
T ss_pred             cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEcCCEEEE--EeCCCcEEEEECCCCce
Confidence            88999999999999999999999 699999999987654444322   3345556788888  78999999999998876


Q ss_pred             eEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccc--cccccCCcceEEee
Q psy14511        398 IEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKR--KARQVGSGSSLEFA  455 (488)
Q Consensus       398 ~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~--~~~~~~~v~~~~~s  455 (488)
                      ..... |...+..++|+|++++|++++ ||.|++||+.+++...  ...+...+.+++|+
T Consensus       385 ~~~~~-~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~  442 (464)
T 3v7d_B          385 KFSYH-HTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFK  442 (464)
T ss_dssp             EEEEE-CTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE
T ss_pred             eeeec-CCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEec
Confidence            66554 667788899999999999998 9999999999999874  46778889999997

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=100.00  E-value=4.4e-37  Score=287.90  Aligned_cols=298  Identities=16%  Similarity=0.270  Sum_probs=248.0

Q ss_pred             ccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccc
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHL   80 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~   80 (488)
                      .++|++|++|+.||+|++||+.+++.+ ..+.+|.+.|.+++|+  +++|++|+ |+.|++||+.+++   .+..+.+|.
T Consensus       126 ~~~g~~l~sg~~dg~i~vwd~~~~~~~-~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~---~~~~~~~h~  199 (445)
T 2ovr_B          126 QFCGNRIVSGSDDNTLKVWSAVTGKCL-RTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGE---CIHTLYGHT  199 (445)
T ss_dssp             EEETTEEEEEETTSCEEEEETTTCCEE-EECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTE---EEEEECCCS
T ss_pred             EEcCCEEEEEECCCcEEEEECCCCcEE-EEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCc---EEEEECCCC
Confidence            358999999999999999999988844 6688999999999998  66999998 9999999998754   445567899


Q ss_pred             cceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceec
Q psy14511         81 SAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLN  160 (488)
Q Consensus        81 ~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (488)
                      ..|.++.|+  ++.+++++.   |++|++||+.+++.+..+..+...                                 
T Consensus       200 ~~v~~~~~~--~~~l~s~s~---dg~i~~wd~~~~~~~~~~~~~~~~---------------------------------  241 (445)
T 2ovr_B          200 STVRCMHLH--EKRVVSGSR---DATLRVWDIETGQCLHVLMGHVAA---------------------------------  241 (445)
T ss_dssp             SCEEEEEEE--TTEEEEEET---TSEEEEEESSSCCEEEEEECCSSC---------------------------------
T ss_pred             CcEEEEEec--CCEEEEEeC---CCEEEEEECCCCcEEEEEcCCccc---------------------------------
Confidence            999999996  446666665   999999999998877666554221                                 


Q ss_pred             cccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCC
Q psy14511        161 QSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYD  240 (488)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~  240 (488)
                                                              +.++.++++.+++++.|+.|++||+.+++....+..   |
T Consensus       242 ----------------------------------------v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~---~  278 (445)
T 2ovr_B          242 ----------------------------------------VRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQG---H  278 (445)
T ss_dssp             ----------------------------------------EEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEECC---C
T ss_pred             ----------------------------------------EEEEEECCCEEEEEcCCCEEEEEECCCCcEeEEecC---C
Confidence                                                    223444567789999999999999999887666553   8


Q ss_pred             CCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCcccee
Q psy14511        241 NAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTA  320 (488)
Q Consensus       241 ~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~  320 (488)
                      ...+.+++|  +++.++++ +.|+.|++||+++++.+..+.+|...+.++.++++.+++++.||.|++||+++++ ....
T Consensus       279 ~~~v~~~~~--~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~-~~~~  354 (445)
T 2ovr_B          279 TNRVYSLQF--DGIHVVSG-SLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQ-CLQT  354 (445)
T ss_dssp             SSCEEEEEE--CSSEEEEE-ETTSCEEEEETTTCCEEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCC-EEEE
T ss_pred             CCceEEEEE--CCCEEEEE-eCCCeEEEEECCCCCEEEEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECCCCc-EEEE
Confidence            889999999  77889988 9999999999999999999999999999999999999999999999999998864 5555


Q ss_pred             eec---CCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccce--------ee--eeecCCCCEEEEEccCCCCe
Q psy14511        321 ITR---EGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGL--------IV--PKLKREGRELVTSHGKQDCS  386 (488)
Q Consensus       321 ~~~---~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~--------~~--~~~~~~~~~l~~~~g~~~~~  386 (488)
                      +..   |...|.+++|+  +++|++++ ||.|++||+.+++....+..        .+  .+|+|++..+++  |+.||+
T Consensus       355 ~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~--~~~dg~  430 (445)
T 2ovr_B          355 LQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAV--GSRNGT  430 (445)
T ss_dssp             ECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEE--ECSSSS
T ss_pred             EccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEE--cccCCC
Confidence            554   88899999995  57899998 69999999998865544411        11  289999999999  788887


Q ss_pred             ----EEEEeCCC
Q psy14511        387 ----LKMWEYPR  394 (488)
Q Consensus       387 ----i~i~d~~~  394 (488)
                          +.+||+..
T Consensus       431 ~~~~l~v~df~~  442 (445)
T 2ovr_B          431 EETKLLVLDFDV  442 (445)
T ss_dssp             SCCEEEEEECCC
T ss_pred             CccEEEEEECCC
Confidence                99999864

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=100.00  E-value=4e-37  Score=283.81  Aligned_cols=298  Identities=25%  Similarity=0.437  Sum_probs=254.6

Q ss_pred             cccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEE
Q psy14511        179 PRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAV  258 (488)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~  258 (488)
                      .+..+..+.+++..+....++++..++|+++.+++++.|+.|++|++.+++........  +...|.+++|+|++++|++
T Consensus        74 ~r~~~~~p~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~--~~~~v~~v~~s~~~~~l~~  151 (401)
T 4aez_A           74 KRRFNTTPERVLDAPGIIDDYYLNLLDWSNLNVVAVALERNVYVWNADSGSVSALAETD--ESTYVASVKWSHDGSFLSV  151 (401)
T ss_dssp             -CCCCCSCSEEEECTTCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECC--TTCCEEEEEECTTSSEEEE
T ss_pred             cCcCCCCcceeeeCCCCcCCceEEEEeecCCCEEEEECCCeEEEeeCCCCcEeEeeecC--CCCCEEEEEECCCCCEEEE
Confidence            35566777888888888888999999999999999999999999999999987776654  6889999999999999999


Q ss_pred             EeCCCCcEEEEECCcceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCc
Q psy14511        259 TNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGR  338 (488)
Q Consensus       259 ~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~  338 (488)
                      + +.||.|++||+.+++.+..+.+|...|.+++|+++.+++++.||.|++||++........+..|...|.+++|+|+++
T Consensus       152 ~-~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~  230 (401)
T 4aez_A          152 G-LGNGLVDIYDVESQTKLRTMAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGL  230 (401)
T ss_dssp             E-ETTSCEEEEETTTCCEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSS
T ss_pred             E-CCCCeEEEEECcCCeEEEEecCCCCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCC
Confidence            9 899999999999999999999999999999999999999999999999999976677888899999999999999999


Q ss_pred             EEEEEe-cCeEEEEECCCCCCCccccee-----eeeecCCCCEEEEE-ccCCCCeEEEEeCCCcceeEEEeeccccEEEE
Q psy14511        339 YLASGS-NNTVKIWDFRQLDAKRPLGLI-----VPKLKREGRELVTS-HGKQDCSLKMWEYPRLHLIEELKIHQERILSA  411 (488)
Q Consensus       339 ~l~~~~-d~~i~iwd~~~~~~~~~~~~~-----~~~~~~~~~~l~~~-~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~  411 (488)
                      +|++++ |+.|++||+++.+....+...     ..+|+|++..++++ +|+.|+.|++||+.+++.+..+. +...|.++
T Consensus       231 ~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~  309 (401)
T 4aez_A          231 QLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSL  309 (401)
T ss_dssp             EEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEE
T ss_pred             EEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEE
Confidence            999999 699999999986544333221     22899977655544 34589999999999999988886 66789999


Q ss_pred             EEcCCCCEEEEEe--CCCcEEEEecCCCCccc---cccccCCcceEEeecCCCceEEEEeeecccccceeeEEEEeeccc
Q psy14511        412 VLSPDQTCVAAAS--ADETISIWNCFPRDKKR---KARQVGSGSSLEFAILKQPVSLTALLRSRAVEKQQHAIAYTVFGE  486 (488)
Q Consensus       412 ~~s~~~~~l~t~~--~dg~v~iw~~~~~~~~~---~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~  486 (488)
                      +|+|++++|++++  .||.|++|++.+++...   ...|...+.+++|+|+++.+       +.+..+..+.+|...+|+
T Consensus       310 ~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l-------~s~~~dg~i~iw~~~~~~  382 (401)
T 4aez_A          310 IWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRIL-------STAASDENLKFWRVYDGD  382 (401)
T ss_dssp             EECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEE-------EEECTTSEEEEEECCC--
T ss_pred             EECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEE-------EEEeCCCcEEEEECCCCc
Confidence            9999999999954  89999999999876543   45788999999999999876       445677888889888876


Q ss_pred             c
Q psy14511        487 A  487 (488)
Q Consensus       487 ~  487 (488)
                      .
T Consensus       383 ~  383 (401)
T 4aez_A          383 H  383 (401)
T ss_dssp             -
T ss_pred             c
Confidence            4

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=100.00  E-value=1.5e-38  Score=288.34  Aligned_cols=194  Identities=15%  Similarity=0.140  Sum_probs=158.4

Q ss_pred             CCCceEEEEEcCCCCeEEEEe-CCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCc
Q psy14511        240 DNAYISCVAWKPRTTDLAVTN-TCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSD  316 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~-~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~  316 (488)
                      +...+.+++|+|||+++++++ +.|++|++||+++++++..+. |...|.+++|  +++++++++.++ +.+|+..++..
T Consensus       132 ~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~~  209 (365)
T 4h5i_A          132 ADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGSC  209 (365)
T ss_dssp             TTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCCE
T ss_pred             cccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEecccee-EEEEEeccCcc
Confidence            455689999999999987652 468999999999999988885 7788999999  789999988555 66666665543


Q ss_pred             c-ceeeecCCccEEEEEEccCCcEEEEEe-cC----eEEEEECCCCCCCcc----cc-----eeeeeecCCCCEEEEEcc
Q psy14511        317 Y-PTAITREGDVVCGLKWSPNGRYLASGS-NN----TVKIWDFRQLDAKRP----LG-----LIVPKLKREGRELVTSHG  381 (488)
Q Consensus       317 ~-~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~----~i~iwd~~~~~~~~~----~~-----~~~~~~~~~~~~l~~~~g  381 (488)
                      . ......|...|.+++|+|+++++++++ ++    .+++|++........    +.     ....+|+|+|++|++  |
T Consensus       210 ~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~las--g  287 (365)
T 4h5i_A          210 IARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVL--A  287 (365)
T ss_dssp             EEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEE--E
T ss_pred             eeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEE--E
Confidence            3 234567888999999999999999988 54    688888876532111    11     112289999999999  7


Q ss_pred             CCCCeEEEEeCCCcceeEEE-eeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCC
Q psy14511        382 KQDCSLKMWEYPRLHLIEEL-KIHQERILSAVLSPDQTCVAAASADETISIWNCFPR  437 (488)
Q Consensus       382 ~~~~~i~i~d~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~  437 (488)
                      +.|++|+|||+++++++.++ .+|..+|++++|||||++||+||.|++|+||++.+.
T Consensus       288 s~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~  344 (365)
T 4h5i_A          288 SNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN  344 (365)
T ss_dssp             ETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred             cCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence            89999999999999999875 789999999999999999999999999999999754

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=100.00  E-value=5.1e-37  Score=270.73  Aligned_cols=252  Identities=17%  Similarity=0.269  Sum_probs=201.1

Q ss_pred             eeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecC--CCeEEeeeCCcccce
Q psy14511         30 TAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPW--EPTLLATGGGICDQT  106 (488)
Q Consensus        30 ~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~l~~~~~~~~d~~  106 (488)
                      ..+.+|.+.|++++|+|+|++||+|+ |++|+|||+.+.. .+.+..+.+|.++|.+++|+++  +++|++++.   |++
T Consensus         3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~-~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~---D~~   78 (297)
T 2pm7_B            3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGET-HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY---DGK   78 (297)
T ss_dssp             EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSC-BCCCEEECCCSSCEEEEEECCGGGCSEEEEEET---TTE
T ss_pred             eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCC-cEEEEEEccccCCeEEEEecCCCcCCEEEEEcC---CCE
Confidence            35679999999999999999999998 9999999997532 3456678899999999999864  666666665   999


Q ss_pred             EEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCC
Q psy14511        107 VRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKP  186 (488)
Q Consensus       107 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (488)
                      |++||+.+++...                                                                   
T Consensus        79 v~iWd~~~~~~~~-------------------------------------------------------------------   91 (297)
T 2pm7_B           79 VMIWKEENGRWSQ-------------------------------------------------------------------   91 (297)
T ss_dssp             EEEEEBSSSCBCC-------------------------------------------------------------------
T ss_pred             EEEEEcCCCceEE-------------------------------------------------------------------
Confidence            9999987653110                                                                   


Q ss_pred             ceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCC--CCeEEEEeCCCC
Q psy14511        187 ERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPR--TTDLAVTNTCTE  264 (488)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~~~~  264 (488)
                                                                    ...+.+ |...|.+++|+|+  +.+|+++ +.|+
T Consensus        92 ----------------------------------------------~~~~~~-h~~~v~~v~~~p~~~g~~l~s~-s~d~  123 (297)
T 2pm7_B           92 ----------------------------------------------IAVHAV-HSASVNSVQWAPHEYGPMLLVA-SSDG  123 (297)
T ss_dssp             ----------------------------------------------CEEECC-CSSCEEEEEECCGGGCSEEEEE-ETTS
T ss_pred             ----------------------------------------------EEEeec-CCCceeEEEeCcCCCCcEEEEE-ECCC
Confidence                                                          001112 7788999999998  7888888 9999


Q ss_pred             cEEEEECCcce--eeeeeccccccEEEEEec---------------CCEEEEeecCCeEEEEECcCCCc---cceeeecC
Q psy14511        265 YIDLWHEQEER--LIQKLRTHMHQVIAMCWN---------------GNLLSCGTIGGNILHYDVRTHSD---YPTAITRE  324 (488)
Q Consensus       265 ~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~---------------~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~~  324 (488)
                      .|++||++.+.  ....+.+|...|.+++|.               +++|++|+.|+.|++||+++...   ....+.+|
T Consensus       124 ~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H  203 (297)
T 2pm7_B          124 KVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH  203 (297)
T ss_dssp             EEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCC
T ss_pred             cEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCC
Confidence            99999998753  245677899999999994               35899999999999999987542   34567889


Q ss_pred             CccEEEEEEccCC---cEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEE
Q psy14511        325 GDVVCGLKWSPNG---RYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEE  400 (488)
Q Consensus       325 ~~~i~~~~~s~~~---~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~  400 (488)
                      ...|.+++|+|++   ++||+++ |+.|++||+++...                         .           .....
T Consensus       204 ~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~-------------------------~-----------~~~~~  247 (297)
T 2pm7_B          204 SDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQG-------------------------P-----------WKKTL  247 (297)
T ss_dssp             SSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTS-------------------------C-----------CEEEE
T ss_pred             CCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCC-------------------------c-----------cceee
Confidence            9999999999985   8899998 69999998864310                         0           00111


Q ss_pred             E--eeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCC
Q psy14511        401 L--KIHQERILSAVLSPDQTCVAAASADETISIWNCFP  436 (488)
Q Consensus       401 ~--~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~  436 (488)
                      +  ..|...|.+++|+|++++||+++.||.|++|+...
T Consensus       248 ~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~  285 (297)
T 2pm7_B          248 LKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL  285 (297)
T ss_dssp             SSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred             eecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence            1  35778899999999999999999999999999863

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=100.00  E-value=7.3e-37  Score=285.29  Aligned_cols=301  Identities=17%  Similarity=0.334  Sum_probs=229.4

Q ss_pred             cccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEe
Q psy14511         33 TREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWN  111 (488)
Q Consensus        33 ~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd  111 (488)
                      .+|...|.+++|  ++++|++|+ |+.|++||+.+++   ....+.+|.+.|.+++|  +++.+++++.   ||+|++||
T Consensus       130 ~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~---~~~~~~~h~~~v~~l~~--~~~~l~sg~~---dg~i~vwd  199 (435)
T 1p22_A          130 SETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLE---CKRILTGHTGSVLCLQY--DERVIITGSS---DSTVRVWD  199 (435)
T ss_dssp             CSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCC---EEEEECCCSSCEEEEEC--CSSEEEEEET---TSCEEEEE
T ss_pred             cCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCe---EEEEEcCCCCcEEEEEE--CCCEEEEEcC---CCeEEEEE
Confidence            356677988877  799999998 9999999998744   44557789999999999  6667766665   99999999


Q ss_pred             cCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeec
Q psy14511        112 SMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILE  191 (488)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (488)
                      +.+++.+..+..+..                                                                 
T Consensus       200 ~~~~~~~~~~~~h~~-----------------------------------------------------------------  214 (435)
T 1p22_A          200 VNTGEMLNTLIHHCE-----------------------------------------------------------------  214 (435)
T ss_dssp             SSSCCEEEEECCCCS-----------------------------------------------------------------
T ss_pred             CCCCcEEEEEcCCCC-----------------------------------------------------------------
Confidence            999987766654422                                                                 


Q ss_pred             CCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEE-EecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEE
Q psy14511        192 APSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLL-VEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWH  270 (488)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d  270 (488)
                              .+.++.++++.+++++.|+.|++||+.++..... ....+ |...|.+++|  ++++++++ +.||.|++||
T Consensus       215 --------~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~-~~~~v~~~~~--~~~~l~s~-~~dg~i~vwd  282 (435)
T 1p22_A          215 --------AVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVG-HRAAVNVVDF--DDKYIVSA-SGDRTIKVWN  282 (435)
T ss_dssp             --------CEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECC-CSSCEEEEEE--ETTEEEEE-ETTSEEEEEE
T ss_pred             --------cEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecC-CCCcEEEEEe--CCCEEEEE-eCCCeEEEEE
Confidence                    1233555667889999999999999998875533 23334 8899999999  67899988 9999999999


Q ss_pred             CCcceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEE
Q psy14511        271 EQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVK  349 (488)
Q Consensus       271 ~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~  349 (488)
                      +++++.+..+.+|...+.++.++++.+++|+.||.|++||++++ .....+.+|...|.+++|  ++++|++++ ||.|+
T Consensus       283 ~~~~~~~~~~~~~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~-~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~  359 (435)
T 1p22_A          283 TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECG-ACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIK  359 (435)
T ss_dssp             TTTCCEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTC-CEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEE
T ss_pred             CCcCcEEEEEcCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCCC-CEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEE
Confidence            99999999999999999999999999999999999999999986 467788899999999998  788999998 69999


Q ss_pred             EEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcE
Q psy14511        350 IWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETI  429 (488)
Q Consensus       350 iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v  429 (488)
                      +||+.+......                              .....++..+.+|.+.|++++|  ++++|++++.||.|
T Consensus       360 vwd~~~~~~~~~------------------------------~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i  407 (435)
T 1p22_A          360 VWDLVAALDPRA------------------------------PAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTI  407 (435)
T ss_dssp             EEEHHHHTSTTS------------------------------CTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEE
T ss_pred             EEECCCCCCccc------------------------------cccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEE
Confidence            999865421100                              0112256778889999999999  78899999999999


Q ss_pred             EEEecCCCCccccccccCCcceEEee
Q psy14511        430 SIWNCFPRDKKRKARQVGSGSSLEFA  455 (488)
Q Consensus       430 ~iw~~~~~~~~~~~~~~~~v~~~~~s  455 (488)
                      ++||+.+...........+..++.|.
T Consensus       408 ~iwd~~~~~~~~~~~~~~~~~~~~~~  433 (435)
T 1p22_A          408 LIWDFLNDPAAQAEPPRSPSRTYTYI  433 (435)
T ss_dssp             EEEC----------------------
T ss_pred             EEEECCCCCCcccCCCCCCccceeee
Confidence            99999987766554444455555544

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=100.00  E-value=2.5e-36  Score=283.39  Aligned_cols=316  Identities=18%  Similarity=0.294  Sum_probs=224.2

Q ss_pred             ccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCc--------CCCcccccccc------------cceeEEEEecCC
Q psy14511         34 REGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDA--------KRPQVNNQCHL------------SAVKAIAWCPWE   92 (488)
Q Consensus        34 ~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~--------~~~~~~~~~h~------------~~v~~l~~~~~~   92 (488)
                      .|.+.|++++|+|+|++||+|+ |+.|+|||+.+++.        ......+.+|.            ..|.+++|+|++
T Consensus        26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~  105 (447)
T 3dw8_B           26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK  105 (447)
T ss_dssp             CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred             cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence            5778999999999999999998 99999999987542        11344577898            889999999998


Q ss_pred             --CeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecccccccccee
Q psy14511         93 --PTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQ  170 (488)
Q Consensus        93 --~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (488)
                        ..+++++.   |++|++||+.++.............                           +.+.....       
T Consensus       106 ~~~~l~s~s~---d~~i~iw~~~~~~~~~~~~~~~~~~---------------------------g~~~~~~~-------  148 (447)
T 3dw8_B          106 NAAQFLLSTN---DKTIKLWKISERDKRPEGYNLKEED---------------------------GRYRDPTT-------  148 (447)
T ss_dssp             SSSEEEEEEC---SSCEEEEEEEEEEEEEECCSCC-----------------------------------CCC-------
T ss_pred             CcceEEEeCC---CCeEEEEecccccCCcceecccCcc---------------------------ccccCccc-------
Confidence              66777766   9999999997765432111100000                           00000000       


Q ss_pred             eecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEc
Q psy14511        171 FLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWK  250 (488)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~  250 (488)
                                      ...+..+         .+.  +..            |... ...... ...+ |...|.+++|+
T Consensus       149 ----------------~~~~~~~---------~~~--~~~------------~~~~-~~~~~~-~~~~-h~~~v~~~~~~  186 (447)
T 3dw8_B          149 ----------------VTTLRVP---------VFR--PMD------------LMVE-ASPRRI-FANA-HTYHINSISIN  186 (447)
T ss_dssp             ----------------CCSCCCC---------EEE--EEE------------EEEE-EEEEEE-ECSC-CSSCCCEEEEC
T ss_pred             ----------------ccceEec---------ccc--chh------------eeee-ccceEE-eccC-CCcceEEEEEc
Confidence                            0000000         000  000            0000 001111 1223 88999999999


Q ss_pred             CCCCeEEEEeCCCCcEEEEECCc-ceeee-------eeccccccEEEEEe--cC-CEEEEeecCCeEEEEECcCCCc---
Q psy14511        251 PRTTDLAVTNTCTEYIDLWHEQE-ERLIQ-------KLRTHMHQVIAMCW--NG-NLLSCGTIGGNILHYDVRTHSD---  316 (488)
Q Consensus       251 ~~~~~l~~~~~~~~~i~i~d~~~-~~~~~-------~~~~~~~~v~~~~~--~~-~~l~~~~~dg~i~i~d~~~~~~---  316 (488)
                      |++++++++  .|+.|++||++. ++.+.       .+.+|...|.+++|  ++ +++++++.||.|++||++++..   
T Consensus       187 ~~~~~l~s~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~  264 (447)
T 3dw8_B          187 SDYETYLSA--DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR  264 (447)
T ss_dssp             TTSSEEEEE--CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred             CCCCEEEEe--CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence            999999887  599999999994 44444       35689999999999  45 8999999999999999998653   


Q ss_pred             cceeeecCCc------------cEEEEEEccCCcEEEEEecCeEEEEECCC-CCCCcccceee-----------------
Q psy14511        317 YPTAITREGD------------VVCGLKWSPNGRYLASGSNNTVKIWDFRQ-LDAKRPLGLIV-----------------  366 (488)
Q Consensus       317 ~~~~~~~~~~------------~i~~~~~s~~~~~l~~~~d~~i~iwd~~~-~~~~~~~~~~~-----------------  366 (488)
                      ....+..|..            .|.+++|+|++++|++++++.|++||+++ .+....+....                 
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~  344 (447)
T 3dw8_B          265 HSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFD  344 (447)
T ss_dssp             TCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESSEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGC
T ss_pred             eeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeCCeEEEEeCCCCccccceeecccccccccccccccccccc
Confidence            1567777775            89999999999999999899999999987 54444333221                 


Q ss_pred             ---eeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeec---------------------------------cccEEE
Q psy14511        367 ---PKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIH---------------------------------QERILS  410 (488)
Q Consensus       367 ---~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~---------------------------------~~~v~~  410 (488)
                         .+|+|+++++++  |+.|+.|++||+.+++.+ .+.+|                                 ...|..
T Consensus       345 ~~~~~~s~~~~~l~s--~s~dg~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  421 (447)
T 3dw8_B          345 KFECCWNGSDSVVMT--GSYNNFFRMFDRNTKRDI-TLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILH  421 (447)
T ss_dssp             CCCEEECTTSSEEEE--ECSTTEEEEEETTTCCEE-EEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCE
T ss_pred             ceEEEECCCCCEEEE--eccCCEEEEEEcCCCcce-eeeecccccccccccCCccccccCCcccccccccccccCCceeE
Confidence               489999999988  899999999999998765 33322                                 346889


Q ss_pred             EEEcCCCCEEEEEeCCCcEEEEec
Q psy14511        411 AVLSPDQTCVAAASADETISIWNC  434 (488)
Q Consensus       411 ~~~s~~~~~l~t~~~dg~v~iw~~  434 (488)
                      ++|+|++++||+++.++ +++|.-
T Consensus       422 ~~~~p~~~~la~~~~~~-~~~~~~  444 (447)
T 3dw8_B          422 TAWHPKENIIAVATTNN-LYIFQD  444 (447)
T ss_dssp             EEECSSSSEEEEECSSC-EEEEEC
T ss_pred             EEECCCCCEEEEEecce-eeeecc
Confidence            99999999999998876 777764

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=100.00  E-value=2.3e-37  Score=275.33  Aligned_cols=255  Identities=20%  Similarity=0.268  Sum_probs=195.8

Q ss_pred             cceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEec--CCCeEEeeeCCccc
Q psy14511         28 YPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCP--WEPTLLATGGGICD  104 (488)
Q Consensus        28 ~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~~~l~~~~~~~~d  104 (488)
                      +...+.+|.+.|++++|+|+|++||+|+ |++|+|||+.++.. ..+..+.+|.+.|.+++|++  +++.|++++.   |
T Consensus         5 ~~~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~-~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~---D   80 (316)
T 3bg1_A            5 INTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQ-ILIADLRGHEGPVWQVAWAHPMYGNILASCSY---D   80 (316)
T ss_dssp             ---------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEE-EEEEEEECCSSCEEEEEECCGGGSSCEEEEET---T
T ss_pred             eeeecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCc-EEEEEEcCCCccEEEEEeCCCCCCCEEEEEEC---C
Confidence            3456789999999999999999999998 99999999986432 23456789999999999986  3777666665   9


Q ss_pred             ceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccC
Q psy14511        105 QTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKA  184 (488)
Q Consensus       105 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (488)
                      ++|++||+.++...                                                                  
T Consensus        81 ~~v~iWd~~~~~~~------------------------------------------------------------------   94 (316)
T 3bg1_A           81 RKVIIWREENGTWE------------------------------------------------------------------   94 (316)
T ss_dssp             SCEEEECCSSSCCC------------------------------------------------------------------
T ss_pred             CEEEEEECCCCcce------------------------------------------------------------------
Confidence            99999998765310                                                                  


Q ss_pred             CCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCC--CCeEEEEeCC
Q psy14511        185 KPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPR--TTDLAVTNTC  262 (488)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~~  262 (488)
                                                                     ....+.+ |...|.+++|+|+  +.+|+++ +.
T Consensus        95 -----------------------------------------------~~~~~~~-h~~~V~~v~~~p~~~g~~lasg-s~  125 (316)
T 3bg1_A           95 -----------------------------------------------KSHEHAG-HDSSVNSVCWAPHDYGLILACG-SS  125 (316)
T ss_dssp             -----------------------------------------------EEEEECC-CSSCCCEEEECCTTTCSCEEEE-CS
T ss_pred             -----------------------------------------------EEEEccC-CCCceEEEEECCCCCCcEEEEE-cC
Confidence                                                           0111222 7888999999998  7788888 99


Q ss_pred             CCcEEEEECCcce---eeeeeccccccEEEEEec-------------------CCEEEEeecCCeEEEEECcCCC--ccc
Q psy14511        263 TEYIDLWHEQEER---LIQKLRTHMHQVIAMCWN-------------------GNLLSCGTIGGNILHYDVRTHS--DYP  318 (488)
Q Consensus       263 ~~~i~i~d~~~~~---~~~~~~~~~~~v~~~~~~-------------------~~~l~~~~~dg~i~i~d~~~~~--~~~  318 (488)
                      |+.|++||++.+.   ....+.+|...+.+++|.                   +++|++|+.|+.|++||++...  ...
T Consensus       126 D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~  205 (316)
T 3bg1_A          126 DGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEE  205 (316)
T ss_dssp             SSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEE
T ss_pred             CCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCcccee
Confidence            9999999998753   245567888899888883                   2589999999999999997543  245


Q ss_pred             eeeecCCccEEEEEEccCC----cEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCC
Q psy14511        319 TAITREGDVVCGLKWSPNG----RYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYP  393 (488)
Q Consensus       319 ~~~~~~~~~i~~~~~s~~~----~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~  393 (488)
                      ..+.+|...|.+++|+|++    ++|++++ |++|++||+.+...                          +        
T Consensus       206 ~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~--------------------------~--------  251 (316)
T 3bg1_A          206 QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASS--------------------------N--------  251 (316)
T ss_dssp             ECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTC--------------------------C--------
T ss_pred             eecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccc--------------------------c--------
Confidence            6678899999999999987    7899988 69999998875310                          0        


Q ss_pred             CcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCC
Q psy14511        394 RLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFP  436 (488)
Q Consensus       394 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~  436 (488)
                       ......+..|...|++++|+|++++||+++.||.|++|+...
T Consensus       252 -~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~  293 (316)
T 3bg1_A          252 -TWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESV  293 (316)
T ss_dssp             -CCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECT
T ss_pred             -chhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECC
Confidence             001123456888999999999999999999999999999763

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=100.00  E-value=1.2e-36  Score=275.79  Aligned_cols=303  Identities=14%  Similarity=0.268  Sum_probs=220.8

Q ss_pred             cceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcC-CCcccccccccceeEEEEec--CCCeEEeeeCCcc
Q psy14511         28 YPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAK-RPQVNNQCHLSAVKAIAWCP--WEPTLLATGGGIC  103 (488)
Q Consensus        28 ~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~-~~~~~~~~h~~~v~~l~~~~--~~~~l~~~~~~~~  103 (488)
                      +...+.+|.+.|++++|+|++++||+++ |+.|++||+.++... .....+.+|...|.+++|+|  ++++|++++.   
T Consensus         3 ~~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~---   79 (351)
T 3f3f_A            3 MQPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASY---   79 (351)
T ss_dssp             CCCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEET---
T ss_pred             ccccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcC---
Confidence            3456789999999999999999999998 999999999864322 34455678999999999999  5877777776   


Q ss_pred             cceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeeccccccccccc
Q psy14511        104 DQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVK  183 (488)
Q Consensus       104 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (488)
                      |+.|++||+.+++....                                                               
T Consensus        80 dg~v~vwd~~~~~~~~~---------------------------------------------------------------   96 (351)
T 3f3f_A           80 DKTVKLWEEDPDQEECS---------------------------------------------------------------   96 (351)
T ss_dssp             TSCEEEEEECTTSCTTS---------------------------------------------------------------
T ss_pred             CCeEEEEecCCCccccc---------------------------------------------------------------
Confidence            99999999987652100                                                               


Q ss_pred             CCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCC--CCeEEEEeC
Q psy14511        184 AKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPR--TTDLAVTNT  261 (488)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~  261 (488)
                                                                 .........+.. |...|.+++|+|+  +++++++ +
T Consensus        97 -------------------------------------------~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~~-~  131 (351)
T 3f3f_A           97 -------------------------------------------GRRWNKLCTLND-SKGSLYSVKFAPAHLGLKLACL-G  131 (351)
T ss_dssp             -------------------------------------------SCSEEEEEEECC-CSSCEEEEEECCGGGCSEEEEE-E
T ss_pred             -------------------------------------------ccCcceeeeecc-cCCceeEEEEcCCCCCcEEEEe-c
Confidence                                                       000011122223 7889999999999  9999999 9


Q ss_pred             CCCcEEEEECCcceeeeeec-------------cccccEEEEEe--c---CCEEEEeecCCeEEEEECcCCCc-cceeee
Q psy14511        262 CTEYIDLWHEQEERLIQKLR-------------THMHQVIAMCW--N---GNLLSCGTIGGNILHYDVRTHSD-YPTAIT  322 (488)
Q Consensus       262 ~~~~i~i~d~~~~~~~~~~~-------------~~~~~v~~~~~--~---~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~  322 (488)
                      .|+.|++||+++++.+..+.             .|...+.+++|  +   +..+++++.++.+.+|+...... ....+.
T Consensus       132 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (351)
T 3f3f_A          132 NDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLP  211 (351)
T ss_dssp             TTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECC
T ss_pred             CCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecC
Confidence            99999999998876544432             57778899998  3   78999999999998888776542 356677


Q ss_pred             cCCccEEEEEEccCC----cEEEEEe-cCeEEEEECCCCCCCcccceeee-----eecCCCCEEEEE--ccCCCCeEEEE
Q psy14511        323 REGDVVCGLKWSPNG----RYLASGS-NNTVKIWDFRQLDAKRPLGLIVP-----KLKREGRELVTS--HGKQDCSLKMW  390 (488)
Q Consensus       323 ~~~~~i~~~~~s~~~----~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~-----~~~~~~~~l~~~--~g~~~~~i~i~  390 (488)
                      .|...|.+++|+|++    ++|++++ |+.|++||++.............     ..++........  .+.....+.+|
T Consensus       212 ~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (351)
T 3f3f_A          212 GHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQ  291 (351)
T ss_dssp             CCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------C
T ss_pred             CCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeec
Confidence            899999999999998    8999999 69999999986543222211111     222222222221  12334556677


Q ss_pred             eCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccc
Q psy14511        391 EYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKR  441 (488)
Q Consensus       391 d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~  441 (488)
                      +..+.+.+..+.+|...|++++|+|++++|++++.||.|++|++.+++...
T Consensus       292 ~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~  342 (351)
T 3f3f_A          292 SNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFK  342 (351)
T ss_dssp             CSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEE
T ss_pred             ccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchh
Confidence            777778889999999999999999999999999999999999999876553

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=100.00  E-value=3.8e-36  Score=271.68  Aligned_cols=279  Identities=10%  Similarity=0.077  Sum_probs=230.2

Q ss_pred             eecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCC-eEEeeeCCcccceEE
Q psy14511         31 AITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEP-TLLATGGGICDQTVR  108 (488)
Q Consensus        31 ~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~-~l~~~~~~~~d~~i~  108 (488)
                      ...+|.+.|++++|+|++++|++++ |+.|++||+.+++.........+|...|.+++|+|+++ ++++++.   |+.|+
T Consensus         6 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---dg~i~   82 (342)
T 1yfq_A            6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTV---QGEIL   82 (342)
T ss_dssp             CSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEET---TSCEE
T ss_pred             cccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcC---CCeEE
Confidence            3468999999999999999999998 99999999987553223444568999999999999998 7777776   99999


Q ss_pred             EEec-CCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCc
Q psy14511        109 LWNS-MNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPE  187 (488)
Q Consensus       109 vwd~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (488)
                      +||+ .+++.. .+                                                                  
T Consensus        83 ~wd~~~~~~~~-~~------------------------------------------------------------------   95 (342)
T 1yfq_A           83 KVDLIGSPSFQ-AL------------------------------------------------------------------   95 (342)
T ss_dssp             EECSSSSSSEE-EC------------------------------------------------------------------
T ss_pred             EEEeccCCceE-ec------------------------------------------------------------------
Confidence            9998 765420 00                                                                  


Q ss_pred             eeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEE
Q psy14511        188 RILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYID  267 (488)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~  267 (488)
                                                                     .... |...|.+++|+| ++.++++ +.|+.|+
T Consensus        96 -----------------------------------------------~~~~-~~~~v~~l~~~~-~~~l~s~-~~d~~i~  125 (342)
T 1yfq_A           96 -----------------------------------------------TNNE-ANLGICRICKYG-DDKLIAA-SWDGLIE  125 (342)
T ss_dssp             -----------------------------------------------BSCC-CCSCEEEEEEET-TTEEEEE-ETTSEEE
T ss_pred             -----------------------------------------------cccC-CCCceEEEEeCC-CCEEEEE-cCCCeEE
Confidence                                                           0001 677899999999 8899988 9999999


Q ss_pred             EEECCc---------ceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcC-CCc-cceeeecCCccEEEEEEcc-
Q psy14511        268 LWHEQE---------ERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRT-HSD-YPTAITREGDVVCGLKWSP-  335 (488)
Q Consensus       268 i~d~~~---------~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~-~~~~~~~~~~~i~~~~~s~-  335 (488)
                      +||+++         ++++..+. |...+.++++++..+++++.++.|++||+++ ... .......|...+.+++|+| 
T Consensus       126 iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~  204 (342)
T 1yfq_A          126 VIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPK  204 (342)
T ss_dssp             EECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSG
T ss_pred             EEcccccccccccccCCeeeEEe-eCCceEEEEecCCcEEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCC
Confidence            999988         77777776 8899999999777799999999999999987 543 3334556788899999999 


Q ss_pred             CCcEEEEEe-cCeEEEEECCCC------CCCcccce------------e--eeeecCCCCEEEEEccCCCCeEEEEeCCC
Q psy14511        336 NGRYLASGS-NNTVKIWDFRQL------DAKRPLGL------------I--VPKLKREGRELVTSHGKQDCSLKMWEYPR  394 (488)
Q Consensus       336 ~~~~l~~~~-d~~i~iwd~~~~------~~~~~~~~------------~--~~~~~~~~~~l~~~~g~~~~~i~i~d~~~  394 (488)
                      +++++++++ |+.+++|+++..      +....+..            .  ..+|+|+++++++  ++.||.|++||+.+
T Consensus       205 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~--~~~dg~i~vwd~~~  282 (342)
T 1yfq_A          205 EQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYT--AGSDGIISCWNLQT  282 (342)
T ss_dssp             GGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEE--EETTSCEEEEETTT
T ss_pred             CCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEE--ecCCceEEEEcCcc
Confidence            999999999 599999999876      32222221            1  2289999999998  78899999999999


Q ss_pred             cceeEEEeec-cccEEEEEEcCCCCEEEEEeCCCc-EEEEec
Q psy14511        395 LHLIEELKIH-QERILSAVLSPDQTCVAAASADET-ISIWNC  434 (488)
Q Consensus       395 ~~~~~~~~~~-~~~v~~~~~s~~~~~l~t~~~dg~-v~iw~~  434 (488)
                      ++.+..+.+| ..+|++++  |++++|++++.||. .+.|..
T Consensus       283 ~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~~~~~~~~  322 (342)
T 1yfq_A          283 RKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDTFKTNAAI  322 (342)
T ss_dssp             TEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTHHHHCSSS
T ss_pred             HhHhhhhhcccCCCceEec--CCCCeEEEEecCCcccccccc
Confidence            9999999998 99999999  99999999999998 555553

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.7e-38  Score=286.35  Aligned_cols=308  Identities=9%  Similarity=0.063  Sum_probs=232.3

Q ss_pred             ccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCccccccccc
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLS   81 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~   81 (488)
                      +.||+++|+++.|++|+  |....+    .+.+|...|.+++|+|+|      .++.+.+|+   ++... ...+ .|..
T Consensus        24 SpDG~~iASas~D~TV~--d~~~~~----~l~gh~~~v~~V~FsPdg------~~~~~~~~~---~~~~~-~~~~-~~~~   86 (588)
T 2j04_A           24 ARDGTLYLTTFPDISIG--QPKYAK----DINCNSKNLFHVKEFPLE------FENKLDFEL---AQQNG-LLNS-QPVC   86 (588)
T ss_dssp             CTTSCEEEECSSSEEEE--EECCCS----CCSSBGGGTEEEEEECCC------CCCTTTTSC---CCSSC-SSTT-SCSC
T ss_pred             CCCCCEEEEEcCCceee--cccccc----eecCCCccEEEEEECCCC------CcceEEEEe---CCCce-Eeec-CCCC
Confidence            34999999999999999  755443    347999999999999998      345444444   33222 2222 4588


Q ss_pred             ceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecc
Q psy14511         82 AVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQ  161 (488)
Q Consensus        82 ~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (488)
                      .|.+++|+|||+.|++++.   ||++++||...  ++..+. +...+.                                
T Consensus        87 ~V~~vawSPdG~~LAs~s~---dg~V~iwd~~~--~l~~l~-~~~~~~--------------------------------  128 (588)
T 2j04_A           87 YPRVCKPSPIDDWMAVLSN---NGNVSVFKDNK--MLTNLD-SKGNLS--------------------------------  128 (588)
T ss_dssp             CEEEEEECSSSSCEEEEET---TSCEEEEETTE--EEEECC-CSSCST--------------------------------
T ss_pred             cEEEEEECCCCCEEEEEeC---CCcEEEEeCCc--eeeecc-CCCccc--------------------------------
Confidence            9999999999998888777   99999999533  333333 211100                                


Q ss_pred             ccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC--CCcEEEEECCCeEEEEECCCCce-------EE
Q psy14511        162 SKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG--YHDTLAVALDTSVYTWNTKTNKT-------QL  232 (488)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~v~iw~~~~~~~-------~~  232 (488)
                                                          ...+.++.|+  +..+++++.||+|++||+.++..       ..
T Consensus       129 ------------------------------------~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~  172 (588)
T 2j04_A          129 ------------------------------------SRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFES  172 (588)
T ss_dssp             ------------------------------------TTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEE
T ss_pred             ------------------------------------cccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeee
Confidence                                                0112234444  35678888999999999998853       22


Q ss_pred             EEe--cCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCccee---eeee-ccccccEEEEEecCCEEEEeecCCeE
Q psy14511        233 LVE--YPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERL---IQKL-RTHMHQVIAMCWNGNLLSCGTIGGNI  306 (488)
Q Consensus       233 ~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~---~~~~-~~~~~~v~~~~~~~~~l~~~~~dg~i  306 (488)
                      .+.  ..+ |...|.+++|+|+|  ++++ +.|+.|++||+..+..   ..++ .+|...|.+++|.++.+++++ ++.|
T Consensus       173 ti~~~~~g-h~~~V~sVawSPdg--Laas-s~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFsg~~LASa~-~~tI  247 (588)
T 2j04_A          173 SIRLSDAG-SKDWVTHIVWYEDV--LVAA-LSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIVDYKVVLTC-PGYV  247 (588)
T ss_dssp             EEECSCTT-CCCCEEEEEEETTE--EEEE-ETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEETTEEEEEC-SSEE
T ss_pred             eeeccccc-ccccEEEEEEcCCc--EEEE-eCCCeEEEEECCCCccccceeeecccccCcEEEEEEECCEEEEEe-CCeE
Confidence            222  244 78899999999999  6666 7899999999988763   3456 478889999999878898887 6999


Q ss_pred             EEEECcCCCccceeeecCCccEEEEEE--ccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCC
Q psy14511        307 LHYDVRTHSDYPTAITREGDVVCGLKW--SPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQ  383 (488)
Q Consensus       307 ~i~d~~~~~~~~~~~~~~~~~i~~~~~--s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~  383 (488)
                      ++||+.+.. ......+|...+..++|  +|++..|+++. +|+ ++|....           ..++|++..++.  .  
T Consensus       248 kLWd~~~~~-~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d~-----------~~~spd~~l~a~--~--  310 (588)
T 2j04_A          248 HKIDLKNYS-ISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLEDE-----------LHVTADNIIAPY--L--  310 (588)
T ss_dssp             EEEETTTTE-EEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESSS-----------EEEECCCSSHHH--H--
T ss_pred             EEEECCCCe-EEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeecc-----------EEECCCceEEEE--c--
Confidence            999998753 32333379999999999  99999999999 588 9999872           248999988877  3  


Q ss_pred             CCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEe
Q psy14511        384 DCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAAS  424 (488)
Q Consensus       384 ~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~  424 (488)
                      |+++++|+..... +..+.+ ...|++++|||||+.+|+++
T Consensus       311 d~~v~lW~~~g~~-l~~~~~-~~~I~~va~SPdG~~lA~~~  349 (588)
T 2j04_A          311 EKKFKKWSTIWNE-FNNYET-TLVIHGISLSPDGYSIAIVY  349 (588)
T ss_dssp             HHHHHHTTTTTTS-SSSSCC-EEEEEEEEECTTSSEEEEEE
T ss_pred             CCEEEEEECCCCc-eeeecc-ceEEEEEEECCCCCEEEEEE
Confidence            9999999975444 445554 67799999999999999987

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.7e-35  Score=262.63  Aligned_cols=270  Identities=11%  Similarity=0.157  Sum_probs=218.8

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSA   82 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~   82 (488)
                      ++++||+|+.||.|++||+.+++ ....+..|...|.+++|+|++++|++++ |+.|++|++........+..+.+|...
T Consensus        28 ~~~~l~s~~~dg~v~vw~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~  106 (313)
T 3odt_A           28 DDSKVASVSRDGTVRLWSKDDQW-LGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGN  106 (313)
T ss_dssp             ETTEEEEEETTSEEEEEEESSSE-EEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSC
T ss_pred             CCCEEEEEEcCCcEEEEECCCCE-EEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccC
Confidence            78899999999999999998876 4466788999999999999999999998 999999999876666667778889999


Q ss_pred             eeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccc
Q psy14511         83 VKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQS  162 (488)
Q Consensus        83 v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (488)
                      |.++.|  +++.+++++.   |+.|++||  .++....+..+...+..+.+.                            
T Consensus       107 i~~~~~--~~~~l~~~~~---d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~----------------------------  151 (313)
T 3odt_A          107 VCSLSF--QDGVVISGSW---DKTAKVWK--EGSLVYNLQAHNASVWDAKVV----------------------------  151 (313)
T ss_dssp             EEEEEE--ETTEEEEEET---TSEEEEEE--TTEEEEEEECCSSCEEEEEEE----------------------------
T ss_pred             EEEEEe--cCCEEEEEeC---CCCEEEEc--CCcEEEecccCCCceeEEEEc----------------------------
Confidence            999999  4567777766   99999999  555555555443322211111                            


Q ss_pred             cccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCC
Q psy14511        163 KRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNA  242 (488)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~  242 (488)
                                                                ...++.+++++.|+.|++||  .++....+..  .+..
T Consensus       152 ------------------------------------------~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~--~~~~  185 (313)
T 3odt_A          152 ------------------------------------------SFSENKFLTASADKTIKLWQ--NDKVIKTFSG--IHND  185 (313)
T ss_dssp             ------------------------------------------ETTTTEEEEEETTSCEEEEE--TTEEEEEECS--SCSS
T ss_pred             ------------------------------------------cCCCCEEEEEECCCCEEEEe--cCceEEEEec--cCcc
Confidence                                                      11346788888999999999  3333333332  2788


Q ss_pred             ceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEec-CCEEEEeecCCeEEEEECcCCCccceee
Q psy14511        243 YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWN-GNLLSCGTIGGNILHYDVRTHSDYPTAI  321 (488)
Q Consensus       243 ~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~  321 (488)
                      .+.+++|+|++. ++++ +.++.|++||+++++.+..+..|...+.+++|. ...+++++.||.|++||++++ .....+
T Consensus       186 ~i~~~~~~~~~~-~~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~-~~~~~~  262 (313)
T 3odt_A          186 VVRHLAVVDDGH-FISC-SNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNGDIVSCGEDRTVRIWSKENG-SLKQVI  262 (313)
T ss_dssp             CEEEEEEEETTE-EEEE-ETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSCEEEEETTSEEEEECTTTC-CEEEEE
T ss_pred             cEEEEEEcCCCe-EEEc-cCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCCCEEEEecCCEEEEEECCCC-ceeEEE
Confidence            999999999997 7777 899999999999999999999999999999993 227999999999999999986 467778


Q ss_pred             ecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCC
Q psy14511        322 TREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDA  358 (488)
Q Consensus       322 ~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~  358 (488)
                      ..|...|.+++|+|++++++.+.|+.|++||+++.+.
T Consensus       263 ~~~~~~i~~~~~~~~~~~~~~~~dg~i~iw~~~~~~~  299 (313)
T 3odt_A          263 TLPAISIWSVDCMSNGDIIVGSSDNLVRIFSQEKSRW  299 (313)
T ss_dssp             ECSSSCEEEEEECTTSCEEEEETTSCEEEEESCGGGC
T ss_pred             eccCceEEEEEEccCCCEEEEeCCCcEEEEeCCCCce
Confidence            8899999999999999966655579999999987643

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=100.00  E-value=2.8e-36  Score=278.51  Aligned_cols=274  Identities=15%  Similarity=0.268  Sum_probs=214.7

Q ss_pred             EEEeecCCeEEEEEcccCcc---cceeecccCceEEEEEEcc-CCcEEEEec-CCeEEEEeccccCcC----CCcccccc
Q psy14511          8 LSCGTIGGNILHYDVRTHSD---YPTAITREGDVVCGLKWSP-NGRYLASGS-NNTVKIWDFRQLDAK----RPQVNNQC   78 (488)
Q Consensus         8 la~g~~dg~i~iwd~~~~~~---~~~~~~~h~~~V~~l~~sp-~g~~las~~-d~~i~vwd~~~~~~~----~~~~~~~~   78 (488)
                      +++++.||.|+|||+.....   ....+.+|.+.|++++|+| ++++|++|+ |+.|+|||+.++...    ..+..+.+
T Consensus        50 ~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~  129 (402)
T 2aq5_A           50 ICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEG  129 (402)
T ss_dssp             EBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEEC
T ss_pred             EEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecC
Confidence            33578899999999966432   2345779999999999999 999999998 999999999875422    34566788


Q ss_pred             cccceeEEEEecCCC-eEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccc
Q psy14511         79 HLSAVKAIAWCPWEP-TLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKK  157 (488)
Q Consensus        79 h~~~v~~l~~~~~~~-~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (488)
                      |...|.+++|+|+++ .+++++.   |+.|++||+.+++.+..+.                                   
T Consensus       130 h~~~v~~~~~~p~~~~~l~s~~~---dg~i~iwd~~~~~~~~~~~-----------------------------------  171 (402)
T 2aq5_A          130 HTKRVGIVAWHPTAQNVLLSAGC---DNVILVWDVGTGAAVLTLG-----------------------------------  171 (402)
T ss_dssp             CSSCEEEEEECSSBTTEEEEEET---TSCEEEEETTTTEEEEEEC-----------------------------------
T ss_pred             CCCeEEEEEECcCCCCEEEEEcC---CCEEEEEECCCCCccEEEe-----------------------------------
Confidence            999999999999985 4555554   9999999998776432221                                   


Q ss_pred             eeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecC
Q psy14511        158 VLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYP  237 (488)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~  237 (488)
                                                                                                    ..
T Consensus       172 ------------------------------------------------------------------------------~~  173 (402)
T 2aq5_A          172 ------------------------------------------------------------------------------PD  173 (402)
T ss_dssp             ------------------------------------------------------------------------------TT
T ss_pred             ------------------------------------------------------------------------------cC
Confidence                                                                                          01


Q ss_pred             CCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeee-cccccc-EEEEEe--cCCEEEEe---ecCCeEEEEE
Q psy14511        238 TYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKL-RTHMHQ-VIAMCW--NGNLLSCG---TIGGNILHYD  310 (488)
Q Consensus       238 ~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~-~~~~~~-v~~~~~--~~~~l~~~---~~dg~i~i~d  310 (488)
                      . |...|.+++|+|++++|+++ +.|+.|++||+++++.+..+ ..|... +.++.|  +++++++|   +.|+.|++||
T Consensus       174 ~-~~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd  251 (402)
T 2aq5_A          174 V-HPDTIYSVDWSRDGALICTS-CRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWD  251 (402)
T ss_dssp             T-CCSCEEEEEECTTSSCEEEE-ETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEE
T ss_pred             C-CCCceEEEEECCCCCEEEEE-ecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEc
Confidence            2 77889999999999999999 99999999999999998888 678765 788888  68888888   7899999999


Q ss_pred             CcCCCccceeee-cCCccEEEEEEccCCcEEEEEe--cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeE
Q psy14511        311 VRTHSDYPTAIT-REGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSL  387 (488)
Q Consensus       311 ~~~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i  387 (488)
                      +++......... .+...+.+++|+|++++|++++  |+.|++||+.+                                
T Consensus       252 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~--------------------------------  299 (402)
T 2aq5_A          252 TKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITS--------------------------------  299 (402)
T ss_dssp             TTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECS--------------------------------
T ss_pred             CccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecC--------------------------------
Confidence            998665444333 5677899999999999887553  46666666553                                


Q ss_pred             EEEeCCCcce-eEEEee--ccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcc
Q psy14511        388 KMWEYPRLHL-IEELKI--HQERILSAVLSPDQTCVAAASADETISIWNCFPRDKK  440 (488)
Q Consensus       388 ~i~d~~~~~~-~~~~~~--~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~  440 (488)
                             ++. +..+..  |..+|.+++|+|++.++++  .|+.+++|++.+++..
T Consensus       300 -------~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~~~  346 (402)
T 2aq5_A          300 -------EAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHERKCE  346 (402)
T ss_dssp             -------STTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTEEE
T ss_pred             -------CCcceEeecccccCCcccceEEeccccccee--cceeEEEEEcCCCcEE
Confidence                   332 333333  4588999999999998875  5679999999886543

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=100.00  E-value=5.5e-36  Score=272.37  Aligned_cols=274  Identities=14%  Similarity=0.210  Sum_probs=214.4

Q ss_pred             CC-ceEEEeec---CCeEEEEEcccCcccceeecccCceEEEEEEccC---CcEEEEec-CCeEEEEeccccCcCCCccc
Q psy14511          4 NG-NLLSCGTI---GGNILHYDVRTHSDYPTAITREGDVVCGLKWSPN---GRYLASGS-NNTVKIWDFRQLDAKRPQVN   75 (488)
Q Consensus         4 dg-~~la~g~~---dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~---g~~las~~-d~~i~vwd~~~~~~~~~~~~   75 (488)
                      ++ .++++|+.   ||.|+|||+.+++.......+|...|.+++|+|+   +++|++++ |+.|++||+.+++  ..+..
T Consensus        29 ~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~  106 (357)
T 3i2n_A           29 CSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPE--MPVYS  106 (357)
T ss_dssp             TSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCS--SCSEE
T ss_pred             CCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCC--ccEEE
Confidence            66 45567766   9999999999887554555689999999999998   69999998 9999999998754  24556


Q ss_pred             ccccccceeEEEE------ecCCCeEEeeeCCcccceEEEEecCCCe-eeeeeecCCCccccccccccccccceeEEEEE
Q psy14511         76 NQCHLSAVKAIAW------CPWEPTLLATGGGICDQTVRLWNSMNGK-EKCHVKTDSQQANDETISYREQKKRRHLSFLL  148 (488)
Q Consensus        76 ~~~h~~~v~~l~~------~~~~~~l~~~~~~~~d~~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (488)
                      +.+|...|.++.|      +|+++.+++++.   |+.|++||+.+++ ....+..+.....                   
T Consensus       107 ~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~---d~~i~vwd~~~~~~~~~~~~~~~~~~~-------------------  164 (357)
T 3i2n_A          107 VKGHKEIINAIDGIGGLGIGEGAPEIVTGSR---DGTVKVWDPRQKDDPVANMEPVQGENK-------------------  164 (357)
T ss_dssp             ECCCSSCEEEEEEESGGGCC-CCCEEEEEET---TSCEEEECTTSCSSCSEEECCCTTSCC-------------------
T ss_pred             EEecccceEEEeeccccccCCCccEEEEEeC---CCeEEEEeCCCCCCcceeccccCCCCC-------------------
Confidence            7789999999965      678888777776   9999999998876 4444433211000                   


Q ss_pred             eeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeee------eCCCcEEEEECCCeEEE
Q psy14511        149 HGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLD------WGYHDTLAVALDTSVYT  222 (488)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~d~~v~i  222 (488)
                                                                        ..+..+.      ..+..+++++.|+.|++
T Consensus       165 --------------------------------------------------~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i  194 (357)
T 3i2n_A          165 --------------------------------------------------RDCWTVAFGNAYNQEERVVCAGYDNGDIKL  194 (357)
T ss_dssp             --------------------------------------------------CCEEEEEEECCCC-CCCEEEEEETTSEEEE
T ss_pred             --------------------------------------------------CceEEEEEEeccCCCCCEEEEEccCCeEEE
Confidence                                                              0011111      22356777789999999


Q ss_pred             EECCCCceEEEEecCCCCCCceEEEEEcC---CCCeEEEEeCCCCcEEEEECCcceeeeeec-----cccccEEEEEe--
Q psy14511        223 WNTKTNKTQLLVEYPTYDNAYISCVAWKP---RTTDLAVTNTCTEYIDLWHEQEERLIQKLR-----THMHQVIAMCW--  292 (488)
Q Consensus       223 w~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~-----~~~~~v~~~~~--  292 (488)
                      ||+.+++......    +...+.+++|+|   +++.++++ +.||.|++||+++++....+.     +|...|.+++|  
T Consensus       195 ~d~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  269 (357)
T 3i2n_A          195 FDLRNMALRWETN----IKNGVCSLEFDRKDISMNKLVAT-SLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLP  269 (357)
T ss_dssp             EETTTTEEEEEEE----CSSCEEEEEESCSSSSCCEEEEE-ESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEET
T ss_pred             EECccCceeeecC----CCCceEEEEcCCCCCCCCEEEEE-CCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECC
Confidence            9999988755433    778999999999   89999999 999999999998877665554     89999999999  


Q ss_pred             cCC-EEEEeecCCeEEEEECcCCCc------------------cceeeecCCccEEEEEEccCCcEEE-EEe-cCeEEEE
Q psy14511        293 NGN-LLSCGTIGGNILHYDVRTHSD------------------YPTAITREGDVVCGLKWSPNGRYLA-SGS-NNTVKIW  351 (488)
Q Consensus       293 ~~~-~l~~~~~dg~i~i~d~~~~~~------------------~~~~~~~~~~~i~~~~~s~~~~~l~-~~~-d~~i~iw  351 (488)
                      +++ ++++++.||.|++||++....                  ....+..|...|.+++|+|++++|+ +++ |+.|++|
T Consensus       270 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw  349 (357)
T 3i2n_A          270 QNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVL  349 (357)
T ss_dssp             TEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEE
T ss_pred             CCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEE
Confidence            455 899999999999999986432                  3556788999999999999999998 677 6999999


Q ss_pred             ECCCC
Q psy14511        352 DFRQL  356 (488)
Q Consensus       352 d~~~~  356 (488)
                      |+.+.
T Consensus       350 ~~~~~  354 (357)
T 3i2n_A          350 IVTKL  354 (357)
T ss_dssp             EECC-
T ss_pred             ECCCc
Confidence            99865

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=100.00  E-value=1.8e-35  Score=272.99  Aligned_cols=284  Identities=14%  Similarity=0.135  Sum_probs=221.3

Q ss_pred             ccCCceEEEeecCCeEEEEEcccCc-----ccceeecccCceEEEEEEccC----C---cEEEEec-CCeEEEEeccccC
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTHS-----DYPTAITREGDVVCGLKWSPN----G---RYLASGS-NNTVKIWDFRQLD   68 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~~-----~~~~~~~~h~~~V~~l~~sp~----g---~~las~~-d~~i~vwd~~~~~   68 (488)
                      .|+.++||+|+.||.|+|||+.+++     .....+.+|...|.+++|+|+    +   ++|++++ |+.|++||+.+++
T Consensus        23 ~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~  102 (397)
T 1sq9_A           23 SACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITRED  102 (397)
T ss_dssp             EECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECT
T ss_pred             EecCCeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCc
Confidence            4566899999999999999999876     234567799999999999999    9   9999998 9999999998755


Q ss_pred             cCCC--ccccccc-----ccceeEEEEe----cCCCe-EEeeeCCcccceEEEEecCC------Ceeee-----eeecCC
Q psy14511         69 AKRP--QVNNQCH-----LSAVKAIAWC----PWEPT-LLATGGGICDQTVRLWNSMN------GKEKC-----HVKTDS  125 (488)
Q Consensus        69 ~~~~--~~~~~~h-----~~~v~~l~~~----~~~~~-l~~~~~~~~d~~i~vwd~~~------~~~~~-----~~~~~~  125 (488)
                      ....  +..+..|     ...|.+++|+    |++++ +++++.   |+.|++||+.+      ++.+.     .+... 
T Consensus       103 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-  178 (397)
T 1sq9_A          103 ETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDV---KGTTYIWKFHPFADESNSLTLNWSPTLELQGT-  178 (397)
T ss_dssp             TTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEET---TSCEEEEEEESSSSHHHHTTTCCCCEEEEEEE-
T ss_pred             ccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeC---CCcEEEEeCCccccccccceeeccCcceeeee-
Confidence            3111  4445667     5899999999    99988 777666   99999999987      43322     11100 


Q ss_pred             CccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeee
Q psy14511        126 QQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLD  205 (488)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (488)
                                                                                       ..........+.++.
T Consensus       179 -----------------------------------------------------------------~~~~~~~~~~i~~~~  193 (397)
T 1sq9_A          179 -----------------------------------------------------------------VESPMTPSQFATSVD  193 (397)
T ss_dssp             -----------------------------------------------------------------ECCSSSSCCCCCEEE
T ss_pred             -----------------------------------------------------------------eccccCCCCCceEEE
Confidence                                                                             000000112233455


Q ss_pred             eCCC-cEEEEECCCeEEEEECCCCceEEEEecCCCC---CCceEEEEEcCCCCeEEEEeCCC---CcEEEEECCcceeee
Q psy14511        206 WGYH-DTLAVALDTSVYTWNTKTNKTQLLVEYPTYD---NAYISCVAWKPRTTDLAVTNTCT---EYIDLWHEQEERLIQ  278 (488)
Q Consensus       206 ~~~~-~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~l~~~~~~~---~~i~i~d~~~~~~~~  278 (488)
                      |+++ .+++++.|+.|++||+.+++....+.....|   ...+.+++|+|++++|+++ +.|   +.|++||+++++.+.
T Consensus       194 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~-~~d~~~g~i~i~d~~~~~~~~  272 (397)
T 1sq9_A          194 ISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIA-HDSNSFGCITLYETEFGERIG  272 (397)
T ss_dssp             ECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEE-EEETTEEEEEEEETTTCCEEE
T ss_pred             ECCCceEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEE-ecCCCCceEEEEECCCCcccc
Confidence            5443 5666679999999999998877776641114   7899999999999999999 888   999999999999999


Q ss_pred             eecc-------------ccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeee------cC-------------
Q psy14511        279 KLRT-------------HMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAIT------RE-------------  324 (488)
Q Consensus       279 ~~~~-------------~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~------~~-------------  324 (488)
                      .+..             |...|.+++|  ++++|++++.||.|++||+++. .....+.      .|             
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~  351 (397)
T 1sq9_A          273 SLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK-ERITTLNMHCDDIEIEEDILAVDEHGDS  351 (397)
T ss_dssp             EECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT-EEEEEEECCGGGCSSGGGCCCBCTTSCB
T ss_pred             eeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC-ceeEEEecccCcccchhhhhcccccccc
Confidence            9988             9999999999  6899999999999999999886 4566666      67             


Q ss_pred             --CccEEEEEEccCC----------cEEEEEe-cCeEEEEECCCC
Q psy14511        325 --GDVVCGLKWSPNG----------RYLASGS-NNTVKIWDFRQL  356 (488)
Q Consensus       325 --~~~i~~~~~s~~~----------~~l~~~~-d~~i~iwd~~~~  356 (488)
                        ...|.+++|+|++          ++|++++ |+.|++||+.++
T Consensus       352 ~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g  396 (397)
T 1sq9_A          352 LAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG  396 (397)
T ss_dssp             CSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred             ccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence              8999999999998          7899888 699999998764

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=100.00  E-value=5.9e-35  Score=263.69  Aligned_cols=236  Identities=14%  Similarity=0.221  Sum_probs=195.7

Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCcc
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDY  317 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~  317 (488)
                      |...|.+++|+|++++++++ +.|+.|++|+............+...+....+  +++.+++++.|+.+++||.......
T Consensus        85 h~~~V~~~~~s~dg~~l~s~-~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~  163 (340)
T 4aow_A           85 HSHFVSDVVISSDGQFALSG-SWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKY  163 (340)
T ss_dssp             CSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEE
T ss_pred             CCCCEEEEEECCCCCEEEEE-cccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceE
Confidence            88899999999999999999 99999999999998888888888888888877  6899999999999999999876656


Q ss_pred             ceeeecCCccEEEEEEccCC--cEEEEEe-cCeEEEEECCCCCCCccccee-----eeeecCCCCEEEEEccCCCCeEEE
Q psy14511        318 PTAITREGDVVCGLKWSPNG--RYLASGS-NNTVKIWDFRQLDAKRPLGLI-----VPKLKREGRELVTSHGKQDCSLKM  389 (488)
Q Consensus       318 ~~~~~~~~~~i~~~~~s~~~--~~l~~~~-d~~i~iwd~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~g~~~~~i~i  389 (488)
                      ......|...+..++|++++  .++++++ |+.|++||+++.+....+...     ..+|+|+++++++  |+.|+.|++
T Consensus       164 ~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s--~s~Dg~i~i  241 (340)
T 4aow_A          164 TVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCAS--GGKDGQAML  241 (340)
T ss_dssp             EECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEE--EETTCEEEE
T ss_pred             EEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEE--EeCCCeEEE
Confidence            66677889999999999875  4677777 699999999987654433221     2289999999999  789999999


Q ss_pred             EeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccc----------cccccCCcceEEeecCCC
Q psy14511        390 WEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKR----------KARQVGSGSSLEFAILKQ  459 (488)
Q Consensus       390 ~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~----------~~~~~~~v~~~~~s~~~~  459 (488)
                      ||+.+.+.+..+..+ ..|.+++|+|++.++ +++.|+.|++||+.++....          ...|...|.+++|+|+++
T Consensus       242 wd~~~~~~~~~~~~~-~~v~~~~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~  319 (340)
T 4aow_A          242 WDLNEGKHLYTLDGG-DIINALCFSPNRYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQ  319 (340)
T ss_dssp             EETTTTEEEEEEECS-SCEEEEEECSSSSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSS
T ss_pred             EEeccCceeeeecCC-ceEEeeecCCCCcee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCC
Confidence            999999998888754 679999999987655 56679999999998765432          235778899999999998


Q ss_pred             ceEEEEeeecccccceeeEEEEeecccc
Q psy14511        460 PVSLTALLRSRAVEKQQHAIAYTVFGEA  487 (488)
Q Consensus       460 ~~~~~~~~~~~~~~~~~~~i~~~~~g~~  487 (488)
                      .+       +.++.|..+.||..++|.+
T Consensus       320 ~l-------~sgs~Dg~v~iW~~~tGtr  340 (340)
T 4aow_A          320 TL-------FAGYTDNLVRVWQVTIGTR  340 (340)
T ss_dssp             EE-------EEEETTSCEEEEEEEC---
T ss_pred             EE-------EEEeCCCEEEEEeCCCcCC
Confidence            76       4567888999999999975

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=100.00  E-value=5.1e-37  Score=286.07  Aligned_cols=275  Identities=17%  Similarity=0.229  Sum_probs=200.8

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccc-eeecccCceEEEEEEcc-CCcEEEEec-CCeEEEEeccccCcCCCcccccccc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYP-TAITREGDVVCGLKWSP-NGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHL   80 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~-~~~~~h~~~V~~l~~sp-~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~   80 (488)
                      ++++||+|+.||.|+|||+.+++... ..+.+|.+.|++|+|+| ++++|++++ |++|++||+++.. ...+.....+.
T Consensus       131 ~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~-~~~~~~~~~~~  209 (435)
T 4e54_B          131 HPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNI-LRVFASSDTIN  209 (435)
T ss_dssp             CTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCE-EEEEECCSSCS
T ss_pred             CCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCc-eeEEeccCCCC
Confidence            67899999999999999998776432 33568999999999998 789999998 9999999997532 22222233345


Q ss_pred             cceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceec
Q psy14511         81 SAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLN  160 (488)
Q Consensus        81 ~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (488)
                      ..+.+++|+|+++++++++.   |+.|++||++. +.+..+..+...                                 
T Consensus       210 ~~~~~~~~~~~~~~l~~g~~---dg~i~~wd~~~-~~~~~~~~h~~~---------------------------------  252 (435)
T 4e54_B          210 IWFCSLDVSASSRMVVTGDN---VGNVILLNMDG-KELWNLRMHKKK---------------------------------  252 (435)
T ss_dssp             CCCCCEEEETTTTEEEEECS---SSBEEEEESSS-CBCCCSBCCSSC---------------------------------
T ss_pred             ccEEEEEECCCCCEEEEEeC---CCcEeeeccCc-ceeEEEecccce---------------------------------
Confidence            57889999999987776665   99999999853 444444433222                                 


Q ss_pred             cccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCC--C-cEEEEECCCeEEEEECCCCceEEEEecC
Q psy14511        161 QSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGY--H-DTLAVALDTSVYTWNTKTNKTQLLVEYP  237 (488)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~d~~v~iw~~~~~~~~~~~~~~  237 (488)
                                                              +.++.|++  . .+++++.|+.|++||+.+.+....+...
T Consensus       253 ----------------------------------------v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~  292 (435)
T 4e54_B          253 ----------------------------------------VTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYS  292 (435)
T ss_dssp             ----------------------------------------EEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBC
T ss_pred             ----------------------------------------EEeeeecCCCceEEEEecCcceeeEEecccccccceEEEe
Confidence                                                    22233332  3 3556779999999999887654333322


Q ss_pred             CCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecccccc------EEEEEe--cCCEEEEee--------
Q psy14511        238 TYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQ------VIAMCW--NGNLLSCGT--------  301 (488)
Q Consensus       238 ~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~------v~~~~~--~~~~l~~~~--------  301 (488)
                      ..|...|++++|+|++++|+++ +.|+.|++||+.++.....+..|...      +....|  ++..++++.        
T Consensus       293 ~~h~~~v~~~~~spdg~~l~s~-~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  371 (435)
T 4e54_B          293 LPHRHPVNAACFSPDGARLLTT-DQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKS  371 (435)
T ss_dssp             CBCSSCEEECCBCTTSSEEEEE-ESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCC
T ss_pred             eeccccccceeECCCCCeeEEE-cCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEE
Confidence            2288999999999999999999 99999999999988777666544321      122223  344444432        


Q ss_pred             ----cCCeEEEEECcCCCccceeeecCCccEEEE-EEccCCcEEEEEecCeEEEEECCCCC
Q psy14511        302 ----IGGNILHYDVRTHSDYPTAITREGDVVCGL-KWSPNGRYLASGSNNTVKIWDFRQLD  357 (488)
Q Consensus       302 ----~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~-~~s~~~~~l~~~~d~~i~iwd~~~~~  357 (488)
                          .++.|++||..+++.......+|...|.++ +|+|+|++|++++|+.|+|||+++++
T Consensus       372 ~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~d~~i~iW~~~~gk  432 (435)
T 4e54_B          372 CTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAMGYHILIWSQQEAR  432 (435)
T ss_dssp             SSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEECSSEEEECCCC---
T ss_pred             EEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEcCCcEEEEECCcCe
Confidence                346799999998764444456788888887 69999999999989999999998764

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=100.00  E-value=9.2e-35  Score=265.55  Aligned_cols=281  Identities=12%  Similarity=0.126  Sum_probs=224.2

Q ss_pred             ccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccc
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHL   80 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~   80 (488)
                      +.||++||+|+.||.|+|||+.+++.+ ..+.+|...|.+++|+|++++|++++ |+.|++||+.+++..   ..+. |.
T Consensus        41 s~~~~~l~~~~~dg~i~vwd~~~~~~~-~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~---~~~~-~~  115 (369)
T 3zwl_B           41 NKEGDLLFSCSKDSSASVWYSLNGERL-GTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCV---ATWK-SP  115 (369)
T ss_dssp             CTTSCEEEEEESSSCEEEEETTTCCEE-EEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEE---EEEE-CS
T ss_pred             cCCCCEEEEEeCCCEEEEEeCCCchhh-hhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE---EEee-cC
Confidence            348999999999999999999988744 67889999999999999999999998 999999999875433   3333 78


Q ss_pred             cceeEEEEecCCCeEEeeeCCccc-----ceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccc
Q psy14511         81 SAVKAIAWCPWEPTLLATGGGICD-----QTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDR  155 (488)
Q Consensus        81 ~~v~~l~~~~~~~~l~~~~~~~~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (488)
                      ..|.+++|+|+++++++++.   +     +.|++||+..+.....+........                          
T Consensus       116 ~~v~~~~~~~~~~~l~~~~~---~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~--------------------------  166 (369)
T 3zwl_B          116 VPVKRVEFSPCGNYFLAILD---NVMKNPGSINIYEIERDSATHELTKVSEEPI--------------------------  166 (369)
T ss_dssp             SCEEEEEECTTSSEEEEEEC---CBTTBCCEEEEEEEEECTTTCCEEEECSSCS--------------------------
T ss_pred             CCeEEEEEccCCCEEEEecC---CccCCCCEEEEEEecCCccceeeccccccee--------------------------
Confidence            89999999999998888776   7     9999999976654332221100000                          


Q ss_pred             cceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC--CCcEEEEECCCeEEEEECCC-CceEE
Q psy14511        156 KKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG--YHDTLAVALDTSVYTWNTKT-NKTQL  232 (488)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~v~iw~~~~-~~~~~  232 (488)
                                                      ....  .......+..+.|+  +..+++++.++.|++||+.+ .+...
T Consensus       167 --------------------------------~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~  212 (369)
T 3zwl_B          167 --------------------------------HKII--THEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVD  212 (369)
T ss_dssp             --------------------------------EEEE--CCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEE
T ss_pred             --------------------------------eecc--CCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEE
Confidence                                            0000  00001123334443  35677788999999999998 55555


Q ss_pred             EEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCC------
Q psy14511        233 LVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGG------  304 (488)
Q Consensus       233 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg------  304 (488)
                      .+..   |...|.+++|+|++++|+++ +.|+.|++||+++++.+..+. +...+.+++|  +++++++++.++      
T Consensus       213 ~~~~---~~~~v~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  287 (369)
T 3zwl_B          213 SIDL---HEKSISDMQFSPDLTYFITS-SRDTNSFLVDVSTLQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTT  287 (369)
T ss_dssp             EEEC---CSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC------
T ss_pred             EEec---CCCceeEEEECCCCCEEEEe-cCCceEEEEECCCCceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEE
Confidence            5544   78899999999999999999 999999999999998888886 7788899998  789999999888      


Q ss_pred             --------eEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCC
Q psy14511        305 --------NILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQL  356 (488)
Q Consensus       305 --------~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~  356 (488)
                              .+++||+.+. .....+..|...|.+++|+|++++|++++ |+.|++|++++.
T Consensus       288 ~~~~~~~~~i~~~d~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~  347 (369)
T 3zwl_B          288 TSANEGKFEARFYHKIFE-EEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKS  347 (369)
T ss_dssp             -------CEEEEEETTTC-CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHH
T ss_pred             EecCCCcceeEEEecCCC-cchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECccc
Confidence                    8999999886 46778889999999999999999999999 699999999865

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=100.00  E-value=1.6e-35  Score=271.78  Aligned_cols=267  Identities=16%  Similarity=0.215  Sum_probs=207.7

Q ss_pred             cCC-ceEEEeecCCeEEEEEcccCccccee-ecccCceEEEEEEcc-CCcEEEEec-CCeEEEEeccccCcCCCcccccc
Q psy14511          3 WNG-NLLSCGTIGGNILHYDVRTHSDYPTA-ITREGDVVCGLKWSP-NGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQC   78 (488)
Q Consensus         3 ~dg-~~la~g~~dg~i~iwd~~~~~~~~~~-~~~h~~~V~~l~~sp-~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~   78 (488)
                      .+| ++||+|+.||.|+|||+.+++..... ..+|...|.+++|+| ++++|++++ |+.|++||+.+ .....+....+
T Consensus        83 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~  161 (383)
T 3ei3_B           83 PTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDS  161 (383)
T ss_dssp             SSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCC
T ss_pred             CCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCC
Confidence            367 89999999999999999987754332 237999999999999 789999998 99999999985 32333333345


Q ss_pred             cccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccce
Q psy14511         79 HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKV  158 (488)
Q Consensus        79 h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (488)
                      |...|.+++|+|+++++++++.   |+.|++||+ +++.+..+..+...+.                             
T Consensus       162 ~~~~v~~~~~~~~~~~l~~~~~---d~~i~i~d~-~~~~~~~~~~h~~~v~-----------------------------  208 (383)
T 3ei3_B          162 WDYWYCCVDVSVSRQMLATGDS---TGRLLLLGL-DGHEIFKEKLHKAKVT-----------------------------  208 (383)
T ss_dssp             SSCCEEEEEEETTTTEEEEEET---TSEEEEEET-TSCEEEEEECSSSCEE-----------------------------
T ss_pred             CCCCeEEEEECCCCCEEEEECC---CCCEEEEEC-CCCEEEEeccCCCcEE-----------------------------
Confidence            6688999999999998777776   999999998 5666666655433222                             


Q ss_pred             eccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCC--C-cEEEEECCCeEEEEECCC----CceE
Q psy14511        159 LNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGY--H-DTLAVALDTSVYTWNTKT----NKTQ  231 (488)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~d~~v~iw~~~~----~~~~  231 (488)
                                                                  ++.|++  . .+++++.|+.|++||+.+    +...
T Consensus       209 --------------------------------------------~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~  244 (383)
T 3ei3_B          209 --------------------------------------------HAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYI  244 (383)
T ss_dssp             --------------------------------------------EEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEE
T ss_pred             --------------------------------------------EEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceE
Confidence                                                        233333  2 477788999999999997    4454


Q ss_pred             EEEecCCCCCCceEEEEEcC-CCCeEEEEeCCCCcEEEEECCcceeeeeecccc-----------------ccEEEEEe-
Q psy14511        232 LLVEYPTYDNAYISCVAWKP-RTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHM-----------------HQVIAMCW-  292 (488)
Q Consensus       232 ~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~-----------------~~v~~~~~-  292 (488)
                      ....    |...|.+++|+| ++++++++ +.|+.|++||+++++....+..|.                 ..+..+.+ 
T Consensus       245 ~~~~----~~~~v~~~~~s~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s  319 (383)
T 3ei3_B          245 AEMP----HEKPVNAAYFNPTDSTKLLTT-DQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRY  319 (383)
T ss_dssp             EEEE----CSSCEEEEEECTTTSCEEEEE-ESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECB
T ss_pred             EEec----CCCceEEEEEcCCCCCEEEEE-cCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEec
Confidence            4442    888999999999 99999999 899999999999887766665443                 23344555 


Q ss_pred             -cCCEEEEeecCCeEEEEECcCCCccceeeec--CCccEEEEEEccCCcEEEEEecCeEEEEECCC
Q psy14511        293 -NGNLLSCGTIGGNILHYDVRTHSDYPTAITR--EGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQ  355 (488)
Q Consensus       293 -~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~  355 (488)
                       ++++  +++.|+.|++||+.+++ ....+..  |...+..++|+|++++|++++|+.|++||+++
T Consensus       320 ~dg~~--s~s~d~~i~iwd~~~~~-~~~~l~~~~~~~~~~~~~~s~~g~~l~s~sd~~i~iw~~~~  382 (383)
T 3ei3_B          320 PDDQL--LLNDKRTIDIYDANSGG-LVHQLRDPNAAGIISLNKFSPTGDVLASGMGFNILIWNRED  382 (383)
T ss_dssp             CCTTT--CTTCCCCEEEEETTTCC-EEEEECBTTBCSCCCEEEECTTSSEEEEEETTEEEEEECC-
T ss_pred             CCccc--ccCCCCeEEEEecCCCc-eeeeecCCCCCceEEEEEEecCccEEEEecCCcEEEEecCC
Confidence             4555  77899999999998864 5556655  56777888999999999999999999999874

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=100.00  E-value=8e-35  Score=287.51  Aligned_cols=268  Identities=19%  Similarity=0.335  Sum_probs=206.3

Q ss_pred             CCceEEEeecCCeEEEEEcccCcc----cceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSD----YPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQC   78 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~----~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~   78 (488)
                      ++++|++|+.||+|+|||+.+...    ....+.+|...|.+++|+|++++|++|+ |+.|+|||+.++.   ....+.+
T Consensus       394 ~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~---~~~~~~~  470 (694)
T 3dm0_A          394 NADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGV---STRRFVG  470 (694)
T ss_dssp             CCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE---EEEEEEC
T ss_pred             CCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCc---ceeEEeC
Confidence            468999999999999999986532    2346789999999999999999999999 9999999998744   3445778


Q ss_pred             cccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccce
Q psy14511         79 HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKV  158 (488)
Q Consensus        79 h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (488)
                      |...|.+++|+|+++++++++.   |++|++||+.............                                 
T Consensus       471 h~~~v~~~~~s~~~~~l~s~s~---D~~i~iwd~~~~~~~~~~~~~~---------------------------------  514 (694)
T 3dm0_A          471 HTKDVLSVAFSLDNRQIVSASR---DRTIKLWNTLGECKYTISEGGE---------------------------------  514 (694)
T ss_dssp             CSSCEEEEEECTTSSCEEEEET---TSCEEEECTTSCEEEEECSSTT---------------------------------
T ss_pred             CCCCEEEEEEeCCCCEEEEEeC---CCEEEEEECCCCcceeeccCCC---------------------------------
Confidence            9999999999999998888776   9999999975443221111000                                 


Q ss_pred             eccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCC----CcEEEEECCCeEEEEECCCCceEEEE
Q psy14511        159 LNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGY----HDTLAVALDTSVYTWNTKTNKTQLLV  234 (488)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~d~~v~iw~~~~~~~~~~~  234 (488)
                                                           .....+.++.|++    ..+++++.|+.|++||+.+++....+
T Consensus       515 -------------------------------------~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~  557 (694)
T 3dm0_A          515 -------------------------------------GHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTL  557 (694)
T ss_dssp             -------------------------------------SCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred             -------------------------------------CCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEE
Confidence                                                 0011233344443    24788889999999999998876655


Q ss_pred             ecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECc
Q psy14511        235 EYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVR  312 (488)
Q Consensus       235 ~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~  312 (488)
                      .  + |...|++++|+|++++++++ +.|+.|++||+.+++.+..+.. ...+.+++|  ++.++++ +.++.|++||++
T Consensus       558 ~--~-h~~~v~~v~~spdg~~l~sg-~~Dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~sp~~~~l~~-~~~~~i~iwd~~  631 (694)
T 3dm0_A          558 A--G-HTGYVSTVAVSPDGSLCASG-GKDGVVLLWDLAEGKKLYSLEA-NSVIHALCFSPNRYWLCA-ATEHGIKIWDLE  631 (694)
T ss_dssp             C--C-CSSCEEEEEECTTSSEEEEE-ETTSBCEEEETTTTEEEECCBC-SSCEEEEEECSSSSEEEE-EETTEEEEEETT
T ss_pred             c--C-CCCCEEEEEEeCCCCEEEEE-eCCCeEEEEECCCCceEEEecC-CCcEEEEEEcCCCcEEEE-EcCCCEEEEECC
Confidence            4  3 88999999999999999999 9999999999999998887764 567999999  4555554 556779999998


Q ss_pred             CCCccceeeecC-------------------CccEEEEEEccCCcEEEEEe-cCeEEEEECC
Q psy14511        313 THSDYPTAITRE-------------------GDVVCGLKWSPNGRYLASGS-NNTVKIWDFR  354 (488)
Q Consensus       313 ~~~~~~~~~~~~-------------------~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~  354 (488)
                      +.. ....+..+                   ...+.+++|+|+|++|++++ ||.|++||+.
T Consensus       632 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~  692 (694)
T 3dm0_A          632 SKS-IVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG  692 (694)
T ss_dssp             TTE-EEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred             CCC-ChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence            753 33222211                   12367889999999999988 6999999875

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=100.00  E-value=1.8e-35  Score=270.18  Aligned_cols=285  Identities=14%  Similarity=0.214  Sum_probs=228.4

Q ss_pred             ceeecccCceEEEEEEccC---CcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCccc
Q psy14511         29 PTAITREGDVVCGLKWSPN---GRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICD  104 (488)
Q Consensus        29 ~~~~~~h~~~V~~l~~sp~---g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d  104 (488)
                      ...+.+|.+.|++++|+|+   |++|++|+ |+.|++||+.+.. ......+.+|...|.+++|+|++++|++++.   |
T Consensus        32 ~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~---d  107 (368)
T 3mmy_A           32 IEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSG-QTIPKAQQMHTGPVLDVCWSDDGSKVFTASC---D  107 (368)
T ss_dssp             EECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTS-CEEEEEEEECSSCEEEEEECTTSSEEEEEET---T
T ss_pred             eEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCC-ceeEEEeccccCCEEEEEECcCCCEEEEEcC---C
Confidence            3567899999999999999   69999998 9999999998622 2222456789999999999999998887776   9


Q ss_pred             ceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccC
Q psy14511        105 QTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKA  184 (488)
Q Consensus       105 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (488)
                      +.|++||+.+++...                                                                 
T Consensus       108 g~v~iwd~~~~~~~~-----------------------------------------------------------------  122 (368)
T 3mmy_A          108 KTAKMWDLSSNQAIQ-----------------------------------------------------------------  122 (368)
T ss_dssp             SEEEEEETTTTEEEE-----------------------------------------------------------------
T ss_pred             CcEEEEEcCCCCcee-----------------------------------------------------------------
Confidence            999999998765321                                                                 


Q ss_pred             CCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEE--cCCCCeEEEEeCC
Q psy14511        185 KPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAW--KPRTTDLAVTNTC  262 (488)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~~~~~~  262 (488)
                                                                      ..   . |...|.+++|  +|++++++++ +.
T Consensus       123 ------------------------------------------------~~---~-~~~~v~~~~~~~~~~~~~l~~~-~~  149 (368)
T 3mmy_A          123 ------------------------------------------------IA---Q-HDAPVKTIHWIKAPNYSCVMTG-SW  149 (368)
T ss_dssp             ------------------------------------------------EE---E-CSSCEEEEEEEECSSCEEEEEE-ET
T ss_pred             ------------------------------------------------ec---c-ccCceEEEEEEeCCCCCEEEEc-cC
Confidence                                                            00   1 7788999999  8999999998 99


Q ss_pred             CCcEEEEECCcceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCccceee-ecCCccEEEEEEccCCcE--
Q psy14511        263 TEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAI-TREGDVVCGLKWSPNGRY--  339 (488)
Q Consensus       263 ~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~i~~~~~s~~~~~--  339 (488)
                      |+.|++||+++++.+..+..+. .+.++.+.+..+++++.++.+++|+++......... ..+...+..+++.++...  
T Consensus       150 dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (368)
T 3mmy_A          150 DKTLKFWDTRSSNPMMVLQLPE-RCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKP  228 (368)
T ss_dssp             TSEEEEECSSCSSCSEEEECSS-CEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCE
T ss_pred             CCcEEEEECCCCcEEEEEecCC-CceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCC
Confidence            9999999999998888887654 778888888899999999999999998754333222 223344666666665543  


Q ss_pred             --EEEEe-cCeEEEEECCCCCC---Ccccc-----------------eeeeeecCCCCEEEEEccCCCCeEEEEeCCCcc
Q psy14511        340 --LASGS-NNTVKIWDFRQLDA---KRPLG-----------------LIVPKLKREGRELVTSHGKQDCSLKMWEYPRLH  396 (488)
Q Consensus       340 --l~~~~-d~~i~iwd~~~~~~---~~~~~-----------------~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~  396 (488)
                        +++++ |+.+++||++....   ...+.                 ....+|+|+++++++  ++.||.|++||+.+++
T Consensus       229 ~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s--~~~dg~i~iwd~~~~~  306 (368)
T 3mmy_A          229 TGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLAT--VGSDGRFSFWDKDART  306 (368)
T ss_dssp             EEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEE--EETTSCEEEEETTTTE
T ss_pred             CeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEE--EccCCeEEEEECCCCc
Confidence              88888 69999999987632   11111                 112289999999999  7899999999999999


Q ss_pred             eeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCC
Q psy14511        397 LIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRD  438 (488)
Q Consensus       397 ~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~  438 (488)
                      ++..+.+|..+|++++|+|++++|++++.|+..+.|++...+
T Consensus       307 ~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~~~~  348 (368)
T 3mmy_A          307 KLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQ  348 (368)
T ss_dssp             EEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGGCCTT
T ss_pred             EEEEecCCCCCceEEEECCCCCeEEEEecccccccccccCCC
Confidence            999999999999999999999999999999876666655443

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.3e-36  Score=283.08  Aligned_cols=220  Identities=11%  Similarity=0.064  Sum_probs=179.4

Q ss_pred             CCCceEEEEEcCC------CCeEEEEeCCCCcEEEEECCccee-----------eeeeccccccEEEEEe-cCCEEEEee
Q psy14511        240 DNAYISCVAWKPR------TTDLAVTNTCTEYIDLWHEQEERL-----------IQKLRTHMHQVIAMCW-NGNLLSCGT  301 (488)
Q Consensus       240 ~~~~i~~~~~~~~------~~~l~~~~~~~~~i~i~d~~~~~~-----------~~~~~~~~~~v~~~~~-~~~~l~~~~  301 (488)
                      +...|.+++|+|+      +.+|+++ +.||+|++||+..+..           ...+.+|...|.+++| .+..|++|+
T Consensus       206 ~~~~V~~v~wsp~~~~~~~~~~LAs~-s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs  284 (524)
T 2j04_B          206 SFGEVWDLKWHEGCHAPHLVGCLSFV-SQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPTTVVCGF  284 (524)
T ss_dssp             CCCSEEEEEECSSCCCSSSSCEEEEE-ETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSSEEEEEE
T ss_pred             cCCcEEEEEECCCCCCCCCCceEEEE-ecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCCeEEEEe
Confidence            6678999999997      4688888 9999999999976532           2356789999999999 567999999


Q ss_pred             cCCeEEEEECcCCCccceeeecCCccEEEE--EEccCC-cEEEEEe-cCeEEEEECCCCCCCcccce-------eeeeec
Q psy14511        302 IGGNILHYDVRTHSDYPTAITREGDVVCGL--KWSPNG-RYLASGS-NNTVKIWDFRQLDAKRPLGL-------IVPKLK  370 (488)
Q Consensus       302 ~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~--~~s~~~-~~l~~~~-d~~i~iwd~~~~~~~~~~~~-------~~~~~~  370 (488)
                      .||.|++||++++..+...+..|...|.++  +|+|++ ++||+++ |++|+|||+++.+....+..       ...+|+
T Consensus       285 ~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fs  364 (524)
T 2j04_B          285 KNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYC  364 (524)
T ss_dssp             TTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEE
T ss_pred             CCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeC
Confidence            999999999997655666788999999999  578888 8999999 79999999987644332211       123899


Q ss_pred             CCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcccccc-----c
Q psy14511        371 REGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKAR-----Q  445 (488)
Q Consensus       371 ~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~~~-----~  445 (488)
                      |+++.+++  ++.|++|++||++++.++.++.+|.+.|++++|||++++|++|+.||+|++||+..+.......     +
T Consensus       365 p~~~~l~s--~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~  442 (524)
T 2j04_B          365 PQIYSYIY--SDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRLLHGIKNSSATQK  442 (524)
T ss_dssp             TTTTEEEE--ECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTTTCC------CC
T ss_pred             CCcCeEEE--eCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhccccccCcccee
Confidence            99999888  6889999999999999888999999999999999999999999999999999987642222111     1


Q ss_pred             cCCcceEEeecCCCceE
Q psy14511        446 VGSGSSLEFAILKQPVS  462 (488)
Q Consensus       446 ~~~v~~~~~s~~~~~~~  462 (488)
                      ...+.+++|+|+++.+.
T Consensus       443 ~~~v~~v~~sp~g~~~~  459 (524)
T 2j04_B          443 SLRLWKWDYSIKDDKYR  459 (524)
T ss_dssp             CCEEEECBCCSSSCEEE
T ss_pred             eeEEEEeccCCCCCeEE
Confidence            12356899999887543

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=100.00  E-value=7.2e-35  Score=256.97  Aligned_cols=235  Identities=18%  Similarity=0.335  Sum_probs=187.3

Q ss_pred             ccCCceEEEeecCCeEEEEEcccCc-ccceeecccCceEEEEEEcc--CCcEEEEec-CCeEEEEeccccCcCCCccccc
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTHS-DYPTAITREGDVVCGLKWSP--NGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQ   77 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~~-~~~~~~~~h~~~V~~l~~sp--~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~   77 (488)
                      ++||++||+|+.|++|+|||+.... .....+.+|.++|.+++|+|  ++++||+|+ |++|+|||+++++. ..+..+.
T Consensus        18 s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~-~~~~~~~   96 (297)
T 2pm7_B           18 DYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRW-SQIAVHA   96 (297)
T ss_dssp             CTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCB-CCCEEEC
T ss_pred             CCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCce-EEEEEee
Confidence            5689999999999999999997542 24467899999999999986  489999998 99999999986542 2344567


Q ss_pred             ccccceeEEEEecC--CCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccc
Q psy14511         78 CHLSAVKAIAWCPW--EPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDR  155 (488)
Q Consensus        78 ~h~~~v~~l~~~~~--~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (488)
                      +|...|.+++|+|+  ++++++++.   |++|++||+.++.....                                   
T Consensus        97 ~h~~~v~~v~~~p~~~g~~l~s~s~---d~~v~~wd~~~~~~~~~-----------------------------------  138 (297)
T 2pm7_B           97 VHSASVNSVQWAPHEYGPMLLVASS---DGKVSVVEFKENGTTSP-----------------------------------  138 (297)
T ss_dssp             CCSSCEEEEEECCGGGCSEEEEEET---TSEEEEEEBCSSSCBCC-----------------------------------
T ss_pred             cCCCceeEEEeCcCCCCcEEEEEEC---CCcEEEEEecCCCceee-----------------------------------
Confidence            89999999999998  777666665   99999999875431000                                   


Q ss_pred             cceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEe
Q psy14511        156 KKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVE  235 (488)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~  235 (488)
                                                                                                  .  .
T Consensus       139 ----------------------------------------------------------------------------~--~  140 (297)
T 2pm7_B          139 ----------------------------------------------------------------------------I--I  140 (297)
T ss_dssp             ----------------------------------------------------------------------------E--E
T ss_pred             ----------------------------------------------------------------------------e--e
Confidence                                                                                        0  0


Q ss_pred             cCCCCCCceEEEEEcCC-------------CCeEEEEeCCCCcEEEEECCcce----eeeeeccccccEEEEEec-----
Q psy14511        236 YPTYDNAYISCVAWKPR-------------TTDLAVTNTCTEYIDLWHEQEER----LIQKLRTHMHQVIAMCWN-----  293 (488)
Q Consensus       236 ~~~~~~~~i~~~~~~~~-------------~~~l~~~~~~~~~i~i~d~~~~~----~~~~~~~~~~~v~~~~~~-----  293 (488)
                      +.+ |...+.+++|+|+             +++|+++ +.|+.|++||+++++    ....+.+|...|.+++|+     
T Consensus       141 ~~~-h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sg-s~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~  218 (297)
T 2pm7_B          141 IDA-HAIGVNSASWAPATIEEDGEHNGTKESRKFVTG-GADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLL  218 (297)
T ss_dssp             EEC-CSSCEEEEEECCCC------------CCEEEEE-ETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSS
T ss_pred             eec-ccCccceEeecCCcccccccCCCCCCcceEEEE-cCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCC
Confidence            111 6667888888876             4688888 999999999987754    566788999999999993     


Q ss_pred             CCEEEEeecCCeEEEEECcCCCcc--ceee--ecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCC
Q psy14511        294 GNLLSCGTIGGNILHYDVRTHSDY--PTAI--TREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQ  355 (488)
Q Consensus       294 ~~~l~~~~~dg~i~i~d~~~~~~~--~~~~--~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~  355 (488)
                      +++|++++.|+.|++||++.....  ...+  ..|...|.+++|+|++++||+++ |+.|++|+...
T Consensus       219 ~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~  285 (297)
T 2pm7_B          219 RSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL  285 (297)
T ss_dssp             SEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred             ceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence            378999999999999999864321  1222  46778899999999999999998 69999999763

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=100.00  E-value=3.1e-35  Score=266.60  Aligned_cols=276  Identities=15%  Similarity=0.123  Sum_probs=206.6

Q ss_pred             ccCCceEEEeecC-------CeEEEEEcccCcccc---------eeecccCceEEEEEEccCCcEEEEe-----------
Q psy14511          2 CWNGNLLSCGTIG-------GNILHYDVRTHSDYP---------TAITREGDVVCGLKWSPNGRYLASG-----------   54 (488)
Q Consensus         2 ~~dg~~la~g~~d-------g~i~iwd~~~~~~~~---------~~~~~h~~~V~~l~~sp~g~~las~-----------   54 (488)
                      +.||++||+|+.+       +.|++|++.......         ..+.+|...|.+++++  ++.+++|           
T Consensus        23 s~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~~~~~~l~s~  100 (365)
T 4h5i_A           23 LNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCNENSTKITQG  100 (365)
T ss_dssp             EETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECCCCHHHHHHT
T ss_pred             eCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEECCCccEEEEe
Confidence            3489999998753       369999987654321         1356788888887765  4555543           


Q ss_pred             c-CCeEEEEeccccCcCC------CcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCc
Q psy14511         55 S-NNTVKIWDFRQLDAKR------PQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQ  127 (488)
Q Consensus        55 ~-d~~i~vwd~~~~~~~~------~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~  127 (488)
                      + |+.+++|++.+.....      .......+...+.+++|+|||++++++++ +.|++|++||+.+++++..+... ..
T Consensus       101 ~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~-~~d~~i~iwd~~~~~~~~~~~~~-~~  178 (365)
T 4h5i_A          101 KGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASS-KVPAIMRIIDPSDLTEKFEIETR-GE  178 (365)
T ss_dssp             SCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEES-CSSCEEEEEETTTTEEEEEEECS-SC
T ss_pred             cCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEEC-CCCCEEEEeECCCCcEEEEeCCC-Cc
Confidence            3 7889999987543211      11112334566899999999998765432 14899999999999887766432 22


Q ss_pred             cccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC
Q psy14511        128 ANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG  207 (488)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (488)
                      +..                                                                         +.|+
T Consensus       179 V~~-------------------------------------------------------------------------v~fs  185 (365)
T 4h5i_A          179 VKD-------------------------------------------------------------------------LHFS  185 (365)
T ss_dssp             CCE-------------------------------------------------------------------------EEEC
T ss_pred             eEE-------------------------------------------------------------------------EEEc
Confidence            222                                                                         3343


Q ss_pred             C-CcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCC----cEEEEECCccee----ee
Q psy14511        208 Y-HDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTE----YIDLWHEQEERL----IQ  278 (488)
Q Consensus       208 ~-~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~----~i~i~d~~~~~~----~~  278 (488)
                      + +.+++.+.++.+++|+..+++......... |...+.+++|+|+++.++++ +.++    .+++|++.....    ..
T Consensus       186 pdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~v~fspdg~~l~~~-s~d~~~~~~i~~~~~~~~~~~~~~~~  263 (365)
T 4h5i_A          186 TDGKVVAYITGSSLEVISTVTGSCIARKTDFD-KNWSLSKINFIADDTVLIAA-SLKKGKGIVLTKISIKSGNTSVLRSK  263 (365)
T ss_dssp             TTSSEEEEECSSCEEEEETTTCCEEEEECCCC-TTEEEEEEEEEETTEEEEEE-EESSSCCEEEEEEEEETTEEEEEEEE
T ss_pred             cCCceEEeccceeEEEEEeccCcceeeeecCC-CCCCEEEEEEcCCCCEEEEE-ecCCcceeEEeecccccceecceeee
Confidence            3 466777778889999988888766655555 88899999999999999998 6665    688888766433    34


Q ss_pred             eeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCC
Q psy14511        279 KLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQ  355 (488)
Q Consensus       279 ~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~  355 (488)
                      .+.+|...|.+++|  ++++|++|+.|+.|++||+++++.....+.+|..+|++++|+|||++||+++ |++|+|||+..
T Consensus       264 ~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~  343 (365)
T 4h5i_A          264 QVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPL  343 (365)
T ss_dssp             EEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred             eecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence            56789999999999  7999999999999999999986543344678999999999999999999999 69999999964


Q ss_pred             C
Q psy14511        356 L  356 (488)
Q Consensus       356 ~  356 (488)
                      .
T Consensus       344 ~  344 (365)
T 4h5i_A          344 N  344 (365)
T ss_dssp             T
T ss_pred             C
Confidence            3

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=100.00  E-value=6e-35  Score=272.34  Aligned_cols=264  Identities=18%  Similarity=0.299  Sum_probs=216.5

Q ss_pred             ccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccc
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHL   80 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~   80 (488)
                      .+||++|++|+.||.|++||+.+++.. ..+.+|.+.|.+++|  ++++|++|+ |+.|++||+.+++   .+..+.+|.
T Consensus       140 ~~d~~~l~~g~~dg~i~iwd~~~~~~~-~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~---~~~~~~~h~  213 (435)
T 1p22_A          140 QYDDQKIVSGLRDNTIKIWDKNTLECK-RILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGE---MLNTLIHHC  213 (435)
T ss_dssp             ECCSSEEEEEESSSCEEEEESSSCCEE-EEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCC---EEEEECCCC
T ss_pred             EECCCEEEEEeCCCeEEEEeCCCCeEE-EEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCc---EEEEEcCCC
Confidence            458999999999999999999988744 668899999999999  789999998 9999999998754   455577899


Q ss_pred             cceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeee---eeecCCCccccccccccccccceeEEEEEeeeeccccc
Q psy14511         81 SAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKC---HVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKK  157 (488)
Q Consensus        81 ~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (488)
                      ..|.+++|++  ..+++++.   |+.|++||+.++....   .+..+.                                
T Consensus       214 ~~v~~l~~~~--~~l~s~s~---dg~i~vwd~~~~~~~~~~~~~~~~~--------------------------------  256 (435)
T 1p22_A          214 EAVLHLRFNN--GMMVTCSK---DRSIAVWDMASPTDITLRRVLVGHR--------------------------------  256 (435)
T ss_dssp             SCEEEEECCT--TEEEEEET---TSCEEEEECSSSSCCEEEEEECCCS--------------------------------
T ss_pred             CcEEEEEEcC--CEEEEeeC---CCcEEEEeCCCCCCceeeeEecCCC--------------------------------
Confidence            9999999974  36666665   9999999998776432   111111                                


Q ss_pred             eeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecC
Q psy14511        158 VLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYP  237 (488)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~  237 (488)
                                                               ..+..+.++++.+++++.|+.|++||+.+++....+.. 
T Consensus       257 -----------------------------------------~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~-  294 (435)
T 1p22_A          257 -----------------------------------------AAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNG-  294 (435)
T ss_dssp             -----------------------------------------SCEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEEC-
T ss_pred             -----------------------------------------CcEEEEEeCCCEEEEEeCCCeEEEEECCcCcEEEEEcC-
Confidence                                                     12333455567788899999999999999988776654 


Q ss_pred             CCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCc-
Q psy14511        238 TYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSD-  316 (488)
Q Consensus       238 ~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-  316 (488)
                        |...+.+++++  ++.++++ +.||.|++||+++++++..+.+|...+.+++++++.+++|+.||.|++||+.+... 
T Consensus       295 --~~~~v~~~~~~--~~~l~~g-~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~  369 (435)
T 1p22_A          295 --HKRGIACLQYR--DRLVVSG-SSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDP  369 (435)
T ss_dssp             --CSSCEEEEEEE--TTEEEEE-ETTSCEEEEETTTCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEEHHHHTST
T ss_pred             --CCCcEEEEEeC--CCEEEEE-eCCCeEEEEECCCCCEEEEEeCCcCcEEEEEecCCEEEEEeCCCcEEEEECCCCCCc
Confidence              88899999994  6788888 99999999999999999999999999999999999999999999999999976431 


Q ss_pred             -------cceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCC
Q psy14511        317 -------YPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLD  357 (488)
Q Consensus       317 -------~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~  357 (488)
                             ....+..|...|.+++|  ++++|++++ ||.|++||+.+..
T Consensus       370 ~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~  416 (435)
T 1p22_A          370 RAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDP  416 (435)
T ss_dssp             TSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC-----
T ss_pred             cccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCC
Confidence                   46677889999999999  778899888 6999999987653

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=100.00  E-value=2.1e-34  Score=263.47  Aligned_cols=288  Identities=16%  Similarity=0.160  Sum_probs=225.1

Q ss_pred             cccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCe--eeeeeecCCCccccccccccccccceeEEEEEeeeecc
Q psy14511         77 QCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGK--EKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEID  154 (488)
Q Consensus        77 ~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (488)
                      ..|.++|.+++|+|+++++++++.   |+.|++||+.+++  ....+..+...+..+.+.+                   
T Consensus         5 ~~~~~~i~~~~~s~~~~~l~~~~~---d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~-------------------   62 (372)
T 1k8k_C            5 SFLVEPISCHAWNKDRTQIAICPN---NHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAP-------------------   62 (372)
T ss_dssp             ESCSSCCCEEEECTTSSEEEEECS---SSEEEEEEEETTEEEEEEEEECCSSCEEEEEEET-------------------
T ss_pred             cccCCCeEEEEECCCCCEEEEEeC---CCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeC-------------------
Confidence            448899999999999988777666   9999999998886  5555555433222222211                   


Q ss_pred             ccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEE
Q psy14511        155 RKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLV  234 (488)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~  234 (488)
                                                                          .+..+++++.|+.|++||+.+++.....
T Consensus        63 ----------------------------------------------------~~~~l~~~~~dg~i~vwd~~~~~~~~~~   90 (372)
T 1k8k_C           63 ----------------------------------------------------DSNRIVTCGTDRNAYVWTLKGRTWKPTL   90 (372)
T ss_dssp             ----------------------------------------------------TTTEEEEEETTSCEEEEEEETTEEEEEE
T ss_pred             ----------------------------------------------------CCCEEEEEcCCCeEEEEECCCCeeeeeE
Confidence                                                                2346778889999999999998877776


Q ss_pred             ecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCccee----eeeeccccccEEEEEe--cCCEEEEeecCCeEEE
Q psy14511        235 EYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERL----IQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILH  308 (488)
Q Consensus       235 ~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~----~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i  308 (488)
                      .... +...+.+++|+|++++++++ +.++.|++||++.+..    ......|...+.+++|  +++++++++.||.|++
T Consensus        91 ~~~~-~~~~v~~~~~~~~~~~l~~~-~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~  168 (372)
T 1k8k_C           91 VILR-INRAARCVRWAPNEKKFAVG-SGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRI  168 (372)
T ss_dssp             ECCC-CSSCEEEEEECTTSSEEEEE-ETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred             Eeec-CCCceeEEEECCCCCEEEEE-eCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEE
Confidence            6666 88899999999999999999 8999999999987652    2333678999999999  6889999999999999


Q ss_pred             EECcC-----------------CCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeec
Q psy14511        309 YDVRT-----------------HSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLK  370 (488)
Q Consensus       309 ~d~~~-----------------~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~  370 (488)
                      ||++.                 .......+..|...|.+++|+|++++|++++ |+.|++||+                 
T Consensus       169 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-----------------  231 (372)
T 1k8k_C          169 FSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADA-----------------  231 (372)
T ss_dssp             EECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEG-----------------
T ss_pred             EEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEEC-----------------
Confidence            99742                 1245566778888999999999999888886 355555554                 


Q ss_pred             CCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCC--CCc---------
Q psy14511        371 REGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFP--RDK---------  439 (488)
Q Consensus       371 ~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~--~~~---------  439 (488)
                                            .+++++..+..|..+|.+++|+|++++|+++ .|+.|++|++.+  ++.         
T Consensus       232 ----------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~  288 (372)
T 1k8k_C          232 ----------------------DKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVP  288 (372)
T ss_dssp             ----------------------GGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC
T ss_pred             ----------------------CCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCcc
Confidence                                  4456677888899999999999999988888 899999999988  420         


Q ss_pred             ------------------------------ccc-ccccCCcceEEee-cCC---CceEEEEeeecccccceeeEEEEeec
Q psy14511        440 ------------------------------KRK-ARQVGSGSSLEFA-ILK---QPVSLTALLRSRAVEKQQHAIAYTVF  484 (488)
Q Consensus       440 ------------------------------~~~-~~~~~~v~~~~~s-~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~  484 (488)
                                                    ... ..|...|.+++|. +++   ..+       ..++.|..+.+|...+
T Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l-------~s~~~Dg~i~~W~~~~  361 (372)
T 1k8k_C          289 KQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQF-------CTTGMDGGMSIWDVRS  361 (372)
T ss_dssp             --------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEE-------EEEETTSEEEEEEHHH
T ss_pred             ccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeE-------EEecCCCceEEEEecC
Confidence                                          112 3788999999976 554   555       4567888899998877


Q ss_pred             ccc
Q psy14511        485 GEA  487 (488)
Q Consensus       485 g~~  487 (488)
                      ++.
T Consensus       362 ~~~  364 (372)
T 1k8k_C          362 LES  364 (372)
T ss_dssp             HHH
T ss_pred             hhH
Confidence            653

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=100.00  E-value=9e-36  Score=273.00  Aligned_cols=250  Identities=15%  Similarity=0.190  Sum_probs=191.3

Q ss_pred             eecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEE
Q psy14511         31 AITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRL  109 (488)
Q Consensus        31 ~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~v  109 (488)
                      ....|.++|++++|+|+|++||+++ |+.|++||+.++. ...+..+.+|...|.+++|+|++++|++++.   |++|++
T Consensus         6 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~-~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~---d~~v~v   81 (377)
T 3dwl_C            6 VLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNG-WKHARTFSDHDKIVTCVDWAPKSNRIVTCSQ---DRNAYV   81 (377)
T ss_dssp             EEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTE-EEECCCBCCCSSCEEEEEECTTTCCEEEEET---TSSEEE
T ss_pred             eEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCc-eEEEEEEecCCceEEEEEEeCCCCEEEEEeC---CCeEEE
Confidence            3455778999999999999999997 9999999998642 1345557789999999999999988887776   999999


Q ss_pred             EecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCcee
Q psy14511        110 WNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERI  189 (488)
Q Consensus       110 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (488)
                      ||+.+++...                                                                      
T Consensus        82 wd~~~~~~~~----------------------------------------------------------------------   91 (377)
T 3dwl_C           82 YEKRPDGTWK----------------------------------------------------------------------   91 (377)
T ss_dssp             C------CCC----------------------------------------------------------------------
T ss_pred             EEcCCCCcee----------------------------------------------------------------------
Confidence            9997654100                                                                      


Q ss_pred             ecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEE
Q psy14511        190 LEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLW  269 (488)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~  269 (488)
                                                                ....+.+ |...|.+++|+|++++|+++ +.|+.|++|
T Consensus        92 ------------------------------------------~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~d~~i~iw  127 (377)
T 3dwl_C           92 ------------------------------------------QTLVLLR-LNRAATFVRWSPNEDKFAVG-SGARVISVC  127 (377)
T ss_dssp             ------------------------------------------CEEECCC-CSSCEEEEECCTTSSCCEEE-ESSSCEEEC
T ss_pred             ------------------------------------------eeeEecc-cCCceEEEEECCCCCEEEEE-ecCCeEEEE
Confidence                                                      0111122 77889999999999999999 899999999


Q ss_pred             ECCcce---eeeeecc-ccccEEEEEe--cCCEEEEeecCCeEEEEECcCCC-----------------ccceeeecCCc
Q psy14511        270 HEQEER---LIQKLRT-HMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHS-----------------DYPTAITREGD  326 (488)
Q Consensus       270 d~~~~~---~~~~~~~-~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~-----------------~~~~~~~~~~~  326 (488)
                      |++.++   ....+.. |...|.+++|  ++++|++++.|+.|++||++...                 .....+ .|..
T Consensus       128 d~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  206 (377)
T 3dwl_C          128 YFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGG  206 (377)
T ss_dssp             CC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSS
T ss_pred             EECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCc
Confidence            999876   3677777 9999999999  68899999999999999985321                 233334 8888


Q ss_pred             cEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeecc
Q psy14511        327 VVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQ  405 (488)
Q Consensus       327 ~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~  405 (488)
                      .|.+++|+|++++|++++ |+.|++||+.+.+.                                   ..+.+..+.+|.
T Consensus       207 ~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~-----------------------------------~~~~~~~~~~~~  251 (377)
T 3dwl_C          207 WVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQ-----------------------------------PPRALITVKLSQ  251 (377)
T ss_dssp             SEEEEEECTTSSCEEEEETTTEEC-CEECSTTS-----------------------------------CEEECCCEECSS
T ss_pred             eEEEEEECCCCCEEEEEeCCCcEEEEECCCCCC-----------------------------------cceeeEeecCCC
Confidence            999999999999999887 57777777765411                                   011255677899


Q ss_pred             ccEEEEEEcCCCCEEEEEeCCCcEEEEecC
Q psy14511        406 ERILSAVLSPDQTCVAAASADETISIWNCF  435 (488)
Q Consensus       406 ~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~  435 (488)
                      ..|.+++|+|++++|++++.|+.+ +|+..
T Consensus       252 ~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~  280 (377)
T 3dwl_C          252 LPLRSLLWANESAIVAAGYNYSPI-LLQGN  280 (377)
T ss_dssp             SCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred             CceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence            999999999999999999877666 66665

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1e-34  Score=265.38  Aligned_cols=286  Identities=11%  Similarity=0.119  Sum_probs=217.3

Q ss_pred             cCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecC
Q psy14511         35 EGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSM  113 (488)
Q Consensus        35 h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~  113 (488)
                      -...|.+++|||||+++|+++ |++|+  |...   .+.   +.+|...|.+++|+|+|       .   ++.+.+|+.+
T Consensus        14 ~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~---~~~---l~gh~~~v~~V~FsPdg-------~---~~~~~~~~~~   75 (588)
T 2j04_A           14 FEDWKNNLTWARDGTLYLTTFPDISIG--QPKY---AKD---INCNSKNLFHVKEFPLE-------F---ENKLDFELAQ   75 (588)
T ss_dssp             CSSSSCCEEECTTSCEEEECSSSEEEE--EECC---CSC---CSSBGGGTEEEEEECCC-------C---CCTTTTSCCC
T ss_pred             hhccEEEEEECCCCCEEEEEcCCceee--cccc---cce---ecCCCccEEEEEECCCC-------C---cceEEEEeCC
Confidence            346799999999999999999 99999  6433   322   36899999999999999       3   7777676643


Q ss_pred             CCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCC
Q psy14511        114 NGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAP  193 (488)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (488)
                      ....                                                                            
T Consensus        76 ~~~~----------------------------------------------------------------------------   79 (588)
T 2j04_A           76 QNGL----------------------------------------------------------------------------   79 (588)
T ss_dssp             SSCS----------------------------------------------------------------------------
T ss_pred             CceE----------------------------------------------------------------------------
Confidence            2210                                                                            


Q ss_pred             CccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCc
Q psy14511        194 SIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE  273 (488)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~  273 (488)
                                                              +.. . +...|.+++|+|+|..|+++ +.||.|++||.+.
T Consensus        80 ----------------------------------------~~~-~-~~~~V~~vawSPdG~~LAs~-s~dg~V~iwd~~~  116 (588)
T 2j04_A           80 ----------------------------------------LNS-Q-PVCYPRVCKPSPIDDWMAVL-SNNGNVSVFKDNK  116 (588)
T ss_dssp             ----------------------------------------STT-S-CSCCEEEEEECSSSSCEEEE-ETTSCEEEEETTE
T ss_pred             ----------------------------------------eec-C-CCCcEEEEEECCCCCEEEEE-eCCCcEEEEeCCc
Confidence                                                    000 0 56689999999999999999 9999999999654


Q ss_pred             ceeeeeeccccc-----cEEEEEe--cCCEEEEeecCCeEEEEECcCCCc------cceee----ecCCccEEEEEEccC
Q psy14511        274 ERLIQKLRTHMH-----QVIAMCW--NGNLLSCGTIGGNILHYDVRTHSD------YPTAI----TREGDVVCGLKWSPN  336 (488)
Q Consensus       274 ~~~~~~~~~~~~-----~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~------~~~~~----~~~~~~i~~~~~s~~  336 (488)
                        ++..+. |..     .+.+++|  ||++|++|+.||.|++||+..+..      ....+    .+|...|.+++|+|+
T Consensus       117 --~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPd  193 (588)
T 2j04_A          117 --MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYED  193 (588)
T ss_dssp             --EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETT
T ss_pred             --eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCC
Confidence              666666 665     4999999  899999999999999999988532      23444    567789999999999


Q ss_pred             CcEEEEEecCeEEEEECCCCCCCc---ccc----eeee--eecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeecccc
Q psy14511        337 GRYLASGSNNTVKIWDFRQLDAKR---PLG----LIVP--KLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQER  407 (488)
Q Consensus       337 ~~~l~~~~d~~i~iwd~~~~~~~~---~~~----~~~~--~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~  407 (488)
                      | +++++.|+.+++||+.......   .+.    ..+.  +|+  |+.++++  + +++|++||+.+++......+|.+.
T Consensus       194 g-Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa--~-~~tIkLWd~~~~~~~~~~~gh~~~  267 (588)
T 2j04_A          194 V-LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLT--C-PGYVHKIDLKNYSISSLKTGSLEN  267 (588)
T ss_dssp             E-EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEE--C-SSEEEEEETTTTEEEEEECSCCSC
T ss_pred             c-EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEE--e-CCeEEEEECCCCeEEEEEcCCCce
Confidence            9 5444448999999998776321   121    1122  787  6888884  3 589999999988774444489999


Q ss_pred             EEEEEE--cCCCCEEEEEeCCCcEEEEecC-----CCCc------------------cccccccCCcceEEeecCCCceE
Q psy14511        408 ILSAVL--SPDQTCVAAASADETISIWNCF-----PRDK------------------KRKARQVGSGSSLEFAILKQPVS  462 (488)
Q Consensus       408 v~~~~~--s~~~~~l~t~~~dg~v~iw~~~-----~~~~------------------~~~~~~~~~v~~~~~s~~~~~~~  462 (488)
                      |.+++|  +||+..|++++.||+ ++|..+     +...                  .........|.+++|||||+.++
T Consensus       268 V~~va~~~s~d~~~La~a~edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~~~~~I~~va~SPdG~~lA  346 (588)
T 2j04_A          268 FHIIPLNHEKESTILLMSNKTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNYETTLVIHGISLSPDGYSIA  346 (588)
T ss_dssp             CCEEEETTCSSCEEEEECSSCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSSCCEEEEEEEEECTTSSEEE
T ss_pred             EEEEEeeeCCCCCEEEEEcCCCC-EEEeeccEEECCCceEEEEcCCEEEEEECCCCceeeeccceEEEEEEECCCCCEEE
Confidence            999999  999999999999999 999873     1110                  11111233478899999999887


Q ss_pred             EEEee
Q psy14511        463 LTALL  467 (488)
Q Consensus       463 ~~~~~  467 (488)
                      ....+
T Consensus       347 ~~~~i  351 (588)
T 2j04_A          347 IVYDM  351 (588)
T ss_dssp             EEEEE
T ss_pred             EEEec
Confidence            65544

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=100.00  E-value=3.8e-35  Score=261.05  Aligned_cols=232  Identities=22%  Similarity=0.373  Sum_probs=181.6

Q ss_pred             ccCCceEEEeecCCeEEEEEcccCcc-cceeecccCceEEEEEEcc--CCcEEEEec-CCeEEEEeccccCcCCCccccc
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTHSD-YPTAITREGDVVCGLKWSP--NGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQ   77 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~~~-~~~~~~~h~~~V~~l~~sp--~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~   77 (488)
                      +.||++||+|+.|++|+|||+.++.. ....+.+|.+.|.+++|+|  ++++|++++ |++|++||+++++ ......+.
T Consensus        22 s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~-~~~~~~~~  100 (316)
T 3bg1_A           22 DYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGT-WEKSHEHA  100 (316)
T ss_dssp             CGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSC-CCEEEEEC
T ss_pred             cCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCc-ceEEEEcc
Confidence            45899999999999999999987653 3456889999999999986  489999998 9999999998643 22344567


Q ss_pred             ccccceeEEEEecC--CCeEEeeeCCcccceEEEEecCCCeee---eeeecCCCccccccccccccccceeEEEEEeeee
Q psy14511         78 CHLSAVKAIAWCPW--EPTLLATGGGICDQTVRLWNSMNGKEK---CHVKTDSQQANDETISYREQKKRRHLSFLLHGFE  152 (488)
Q Consensus        78 ~h~~~v~~l~~~~~--~~~l~~~~~~~~d~~i~vwd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (488)
                      +|...|.+++|+|+  +.+|++++.   |++|++||+..+...   ..+..                             
T Consensus       101 ~h~~~V~~v~~~p~~~g~~lasgs~---D~~i~lwd~~~~~~~~~~~~~~~-----------------------------  148 (316)
T 3bg1_A          101 GHDSSVNSVCWAPHDYGLILACGSS---DGAISLLTYTGEGQWEVKKINNA-----------------------------  148 (316)
T ss_dssp             CCSSCCCEEEECCTTTCSCEEEECS---SSCEEEEEECSSSCEEECCBTTS-----------------------------
T ss_pred             CCCCceEEEEECCCCCCcEEEEEcC---CCCEEEEecCCCCCcceeeeecc-----------------------------
Confidence            89999999999998  655555554   999999998765321   11111                             


Q ss_pred             ccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEE
Q psy14511        153 IDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQL  232 (488)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~  232 (488)
                                                                                                      
T Consensus       149 --------------------------------------------------------------------------------  148 (316)
T 3bg1_A          149 --------------------------------------------------------------------------------  148 (316)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEecCCCCCCceEEEEEcC-----------------CCCeEEEEeCCCCcEEEEECCcc---eeeeeeccccccEEEEEe
Q psy14511        233 LVEYPTYDNAYISCVAWKP-----------------RTTDLAVTNTCTEYIDLWHEQEE---RLIQKLRTHMHQVIAMCW  292 (488)
Q Consensus       233 ~~~~~~~~~~~i~~~~~~~-----------------~~~~l~~~~~~~~~i~i~d~~~~---~~~~~~~~~~~~v~~~~~  292 (488)
                             |...+.+++|+|                 ++++|+++ +.|+.|++||++..   +.+..+.+|...|.+++|
T Consensus       149 -------h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg-s~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~  220 (316)
T 3bg1_A          149 -------HTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASG-GCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAW  220 (316)
T ss_dssp             -------SSSCBCCCEECCCCCC------CCSCCCCCCCBEECC-BTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEEC
T ss_pred             -------ccCCcceEEEccccCCccccccccccCccccceEEEe-cCCCeEEEEEeCCCCccceeeecccCCCceEEEEe
Confidence                   222233333333                 25678888 99999999999754   467788899999999999


Q ss_pred             --cC----CEEEEeecCCeEEEEECcCCC---ccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECC
Q psy14511        293 --NG----NLLSCGTIGGNILHYDVRTHS---DYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFR  354 (488)
Q Consensus       293 --~~----~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~  354 (488)
                        ++    ++|++++.|+.|++|+++...   .....+..|...|.+++|+|++++||+++ |+.|++|+..
T Consensus       221 sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~  292 (316)
T 3bg1_A          221 APSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES  292 (316)
T ss_dssp             CCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred             cCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence              33    789999999999999997631   22345677889999999999999999998 6999999976

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=100.00  E-value=2.8e-32  Score=251.01  Aligned_cols=327  Identities=13%  Similarity=0.100  Sum_probs=243.2

Q ss_pred             CceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEE-EEec-CCeEEEEeccccCcCCCcccccccccc
Q psy14511          5 GNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYL-ASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSA   82 (488)
Q Consensus         5 g~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~l-as~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~   82 (488)
                      +.++++++.|+.|++||+.+++.+ ..+..|. .+.+++|+|+|++| ++++ |+.|++||+.+++..   ..+..+ ..
T Consensus         2 ~~l~vs~~~d~~v~v~d~~~~~~~-~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~---~~~~~~-~~   75 (391)
T 1l0q_A            2 TFAYIANSESDNISVIDVTSNKVT-ATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVI---ATVPAG-SS   75 (391)
T ss_dssp             EEEEEEETTTTEEEEEETTTTEEE-EEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEE---EEEECS-SS
T ss_pred             CEEEEEcCCCCEEEEEECCCCeEE-EEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEE---EEEECC-CC
Confidence            457889999999999999988744 4566665 48999999999977 5665 999999999875533   233333 48


Q ss_pred             eeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccc
Q psy14511         83 VKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQS  162 (488)
Q Consensus        83 v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (488)
                      +.+++|+|+++++++++..  ++.|++||+.+++.+..+                                         
T Consensus        76 v~~~~~spdg~~l~~~~~~--~~~v~v~d~~~~~~~~~~-----------------------------------------  112 (391)
T 1l0q_A           76 PQGVAVSPDGKQVYVTNMA--SSTLSVIDTTSNTVAGTV-----------------------------------------  112 (391)
T ss_dssp             EEEEEECTTSSEEEEEETT--TTEEEEEETTTTEEEEEE-----------------------------------------
T ss_pred             ccceEECCCCCEEEEEECC--CCEEEEEECCCCeEEEEE-----------------------------------------
Confidence            9999999999998888763  799999999877643221                                         


Q ss_pred             cccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCC
Q psy14511        163 KRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNA  242 (488)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~  242 (488)
                                                                                              .    +..
T Consensus       113 ------------------------------------------------------------------------~----~~~  116 (391)
T 1l0q_A          113 ------------------------------------------------------------------------K----TGK  116 (391)
T ss_dssp             ------------------------------------------------------------------------E----CSS
T ss_pred             ------------------------------------------------------------------------e----CCC
Confidence                                                                                    1    233


Q ss_pred             ceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEE-EEeecCCeEEEEECcCCCccce
Q psy14511        243 YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLL-SCGTIGGNILHYDVRTHSDYPT  319 (488)
Q Consensus       243 ~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l-~~~~~dg~i~i~d~~~~~~~~~  319 (488)
                      .+.+++|+|+++.++++++.++.|++||+.+++.+..+..+ ..+.+++|  +++.+ ++++.++.|++||+++++ ...
T Consensus       117 ~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~-~~~  194 (391)
T 1l0q_A          117 SPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNS-VID  194 (391)
T ss_dssp             SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE-EEE
T ss_pred             CcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCe-EEE
Confidence            57899999999988655488999999999999888888765 44578888  57766 677889999999998753 333


Q ss_pred             eeecCCccEEEEEEccCCcEEEEEe----cCeEEEEECCCCCCCccccee----eeeecCCCCEEEEEccCCCCeEEEEe
Q psy14511        320 AITREGDVVCGLKWSPNGRYLASGS----NNTVKIWDFRQLDAKRPLGLI----VPKLKREGRELVTSHGKQDCSLKMWE  391 (488)
Q Consensus       320 ~~~~~~~~i~~~~~s~~~~~l~~~~----d~~i~iwd~~~~~~~~~~~~~----~~~~~~~~~~l~~~~g~~~~~i~i~d  391 (488)
                      .+. +...+.+++|+|++++|++++    ++.|++||+.+++....+...    ..+|+|++++++++ +..++.|++||
T Consensus       195 ~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~s-~~~d~~v~v~d  272 (391)
T 1l0q_A          195 TVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVA-LSFXNTVSVID  272 (391)
T ss_dssp             EEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEE-ETTTTEEEEEE
T ss_pred             EEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCCccEEEEccCCCEEEEE-cCCCCEEEEEE
Confidence            333 456789999999999888876    499999999887543333221    22899999988654 67899999999


Q ss_pred             CCCcceeEEEeeccccEE---EEEEcC------------CC----------CEEEEEeCCCcEEEEecCCCCcccccccc
Q psy14511        392 YPRLHLIEELKIHQERIL---SAVLSP------------DQ----------TCVAAASADETISIWNCFPRDKKRKARQV  446 (488)
Q Consensus       392 ~~~~~~~~~~~~~~~~v~---~~~~s~------------~~----------~~l~t~~~dg~v~iw~~~~~~~~~~~~~~  446 (488)
                      +.+++.+..+..|..+..   .+.+.|            +.          ..+...+.|..+++|++.++....     
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~g~~~~-----  347 (391)
T 1l0q_A          273 TATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDGSSSK-----  347 (391)
T ss_dssp             TTTTEEEEEEECSSSEECCSSCEEECSSCCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSEEEEECSSSCEEC-----
T ss_pred             CCCCcEEEEEECCcCCCccceeeecccccccccccccccccccccccccceEEEEeCCCCceEEEEECCCCcccC-----
Confidence            999999988887755432   122222            21          345566778999999998876432     


Q ss_pred             CCcceEEeecCCCceEEEE
Q psy14511        447 GSGSSLEFAILKQPVSLTA  465 (488)
Q Consensus       447 ~~v~~~~~s~~~~~~~~~~  465 (488)
                      .......|+++|.+..-..
T Consensus       348 ~~~~~~~~~~~g~y~~~~~  366 (391)
T 1l0q_A          348 KQNPTHTYSETGIYTVRLT  366 (391)
T ss_dssp             SSSCEECCSSCEEEEEEEE
T ss_pred             cCCCeEEeCCCceEEEEEE
Confidence            2234477899887654333

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=100.00  E-value=6.8e-34  Score=263.53  Aligned_cols=307  Identities=15%  Similarity=0.212  Sum_probs=208.5

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccceee------------cccCceEEEEEEcc-CCcEEEEec-CCeEEEEeccccCc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYPTAI------------TREGDVVCGLKWSP-NGRYLASGS-NNTVKIWDFRQLDA   69 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~------------~~h~~~V~~l~~sp-~g~~las~~-d~~i~vwd~~~~~~   69 (488)
                      ||++||+|+.||.|+|||+.++.......            .+|...|.+++|+| ++++|++++ |+.|++||+.+++.
T Consensus        55 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~  134 (408)
T 4a11_B           55 EGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQT  134 (408)
T ss_dssp             TCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEE
T ss_pred             CCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCcc
Confidence            89999999999999999999877543322            35999999999999 788999998 99999999987543


Q ss_pred             CCCcccccccccceeEEEEecCCC---eEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEE
Q psy14511         70 KRPQVNNQCHLSAVKAIAWCPWEP---TLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSF  146 (488)
Q Consensus        70 ~~~~~~~~~h~~~v~~l~~~~~~~---~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (488)
                      ..   . ..+...+.++.|+|.+.   .+++++.   |+.|++||+.+++.+..+..+...+.                 
T Consensus       135 ~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~~d~~~~~~~~~~~~~~~~v~-----------------  190 (408)
T 4a11_B          135 AD---V-FNFEETVYSHHMSPVSTKHCLVAVGTR---GPKVQLCDLKSGSCSHILQGHRQEIL-----------------  190 (408)
T ss_dssp             EE---E-EECSSCEEEEEECSSCSSCCEEEEEES---SSSEEEEESSSSCCCEEECCCCSCEE-----------------
T ss_pred             ce---e-ccCCCceeeeEeecCCCCCcEEEEEcC---CCeEEEEeCCCcceeeeecCCCCcEE-----------------
Confidence            22   2 23678899999998654   6666665   99999999998887766655433222                 


Q ss_pred             EEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCC--Cc-EEEEECCCeEEEE
Q psy14511        147 LLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGY--HD-TLAVALDTSVYTW  223 (488)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~d~~v~iw  223 (488)
                                                                              ++.|++  .. +++++.|+.|++|
T Consensus       191 --------------------------------------------------------~~~~~~~~~~ll~~~~~dg~i~i~  214 (408)
T 4a11_B          191 --------------------------------------------------------AVSWSPRYDYILATASADSRVKLW  214 (408)
T ss_dssp             --------------------------------------------------------EEEECSSCTTEEEEEETTSCEEEE
T ss_pred             --------------------------------------------------------EEEECCCCCcEEEEEcCCCcEEEE
Confidence                                                                    233332  33 6678899999999


Q ss_pred             ECCCCc-eEEEEec-------------CCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecccc-----
Q psy14511        224 NTKTNK-TQLLVEY-------------PTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHM-----  284 (488)
Q Consensus       224 ~~~~~~-~~~~~~~-------------~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~-----  284 (488)
                      |+.++. ....+..             .. |...|.+++|+|++++++++ +.|+.|++||+.+++....+..+.     
T Consensus       215 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~~~~~~~~  292 (408)
T 4a11_B          215 DVRRASGCLITLDQHNGKKSQAVESANTA-HNGKVNGLCFTSDGLHLLTV-GTDNRMRLWNSSNGENTLVNYGKVCNNSK  292 (408)
T ss_dssp             ETTCSSCCSEECCTTTTCSCCCTTTSSCS-CSSCEEEEEECTTSSEEEEE-ETTSCEEEEETTTCCBCCCCCCCCCCCCS
T ss_pred             ECCCCCcccccccccccccceeecccccc-ccCceeEEEEcCCCCEEEEe-cCCCeEEEEECCCCccceecccccccccc
Confidence            998765 2222210             23 78899999999999999999 999999999999877655443321     


Q ss_pred             -ccEEEEEe-cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcc
Q psy14511        285 -HQVIAMCW-NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRP  361 (488)
Q Consensus       285 -~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~  361 (488)
                       ........ .+..+++++.++.|++||+.++ .....+.+|...|.+++|+|++++|++++ ||.|++||+.+.+....
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~  371 (408)
T 4a11_B          293 KGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSG-EQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPD  371 (408)
T ss_dssp             SCCCCEECCSSSSCEEEEEETTEEEEEETTTC-CEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC------
T ss_pred             ccceeEEecCCCceEEEEecCCEEEEEECcCC-cceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCC
Confidence             11122222 4677788889999999999986 46778889999999999999999999999 69999999998865443


Q ss_pred             cceee--eeecCCCCEEEEEccCCCCeEEEEeCCC
Q psy14511        362 LGLIV--PKLKREGRELVTSHGKQDCSLKMWEYPR  394 (488)
Q Consensus       362 ~~~~~--~~~~~~~~~l~~~~g~~~~~i~i~d~~~  394 (488)
                      .....  ..+.+........ ...++.+++|+.+.
T Consensus       372 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~W~~~~  405 (408)
T 4a11_B          372 DDETTTKSQLNPAFEDAWSS-SDEEGGTSAWSHPQ  405 (408)
T ss_dssp             -----------------------------------
T ss_pred             CCceEeccccccccceeecc-cCccCceeecCCcc
Confidence            32221  2444444333333 56789999998764

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=100.00  E-value=3.9e-34  Score=261.11  Aligned_cols=230  Identities=13%  Similarity=0.162  Sum_probs=192.4

Q ss_pred             CCCceEEEEEcCC----CCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe---cCCEEEEeecCCeEEEEECc
Q psy14511        240 DNAYISCVAWKPR----TTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW---NGNLLSCGTIGGNILHYDVR  312 (488)
Q Consensus       240 ~~~~i~~~~~~~~----~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~i~d~~  312 (488)
                      +...|.+++|+|+    +++++++ +.||.|++||+.+++.+..+.+|...|.+++|   +++++++++.||.|++||++
T Consensus        68 ~~~~v~~~~~~~~~~~~~~~l~~~-~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~  146 (366)
T 3k26_A           68 ADENFYTCAWTYDSNTSHPLLAVA-GSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQ  146 (366)
T ss_dssp             TTCCEEEEEEEECTTTCCEEEEEE-ETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred             CCCcEEEEEeccCCCCCCCEEEEe-cCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEee
Confidence            6778999999999    5678888 99999999999999999999999999999999   56899999999999999998


Q ss_pred             CCCccceee---ecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccce------------------------
Q psy14511        313 THSDYPTAI---TREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGL------------------------  364 (488)
Q Consensus       313 ~~~~~~~~~---~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~------------------------  364 (488)
                      +++ ....+   ..|...|.+++|+|++++|++++ |+.|++||+++.+....+..                        
T Consensus       147 ~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (366)
T 3k26_A          147 TDT-LVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFS  225 (366)
T ss_dssp             TTE-EEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEE
T ss_pred             cCe-EEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccc
Confidence            764 45555   67999999999999999999999 69999999987643322211                        


Q ss_pred             -------eee--eecCCCCEEEEEccCCCCeEEEEeCCCcce--------------eEEEeeccccEEEEEEcCC--CCE
Q psy14511        365 -------IVP--KLKREGRELVTSHGKQDCSLKMWEYPRLHL--------------IEELKIHQERILSAVLSPD--QTC  419 (488)
Q Consensus       365 -------~~~--~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~--------------~~~~~~~~~~v~~~~~s~~--~~~  419 (488)
                             .+.  .|+  ++++++  ++.|+.|++||+.+++.              +..+..|...|++++|+|+  +++
T Consensus       226 ~~~~~~~~v~~~~~~--~~~l~~--~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~  301 (366)
T 3k26_A          226 TRDIHRNYVDCVRWL--GDLILS--KSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKM  301 (366)
T ss_dssp             ECSSCSSCCCEEEEE--TTEEEE--ECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSE
T ss_pred             cccCCcceEEEEEEc--CCEEEE--EecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcE
Confidence                   111  444  778888  78899999999987644              7888899999999999999  999


Q ss_pred             EEEEeCCCcEEEEecCCCCcc-----ccccc--cCCcceEEeecCCCceEEEEeeecccccceeeEEEEe
Q psy14511        420 VAAASADETISIWNCFPRDKK-----RKARQ--VGSGSSLEFAILKQPVSLTALLRSRAVEKQQHAIAYT  482 (488)
Q Consensus       420 l~t~~~dg~v~iw~~~~~~~~-----~~~~~--~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~  482 (488)
                      |++++.||.|++||+.+++..     ....|  ...+.+++|+|+++.+       +.+..+..+.+|..
T Consensus       302 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-------~s~~~dg~i~iwd~  364 (366)
T 3k26_A          302 LALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSIL-------IAVCDDASIWRWDR  364 (366)
T ss_dssp             EEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEE-------EEEETTSEEEEEEC
T ss_pred             EEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeE-------EEEeCCCEEEEEEe
Confidence            999999999999999998754     23444  6899999999999876       34556777777764

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.7e-34  Score=269.87  Aligned_cols=260  Identities=12%  Similarity=0.102  Sum_probs=189.2

Q ss_pred             CCceEEEeecCCeEEEEEccc---Ccccceee-cccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCccccc-
Q psy14511          4 NGNLLSCGTIGGNILHYDVRT---HSDYPTAI-TREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQ-   77 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~---~~~~~~~~-~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~-   77 (488)
                      ||++||+|+.||+|+|||+.+   +......+ .+|...|.+++|+|++++|++++ |+.|++||++............ 
T Consensus        75 ~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~  154 (437)
T 3gre_A           75 ETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNC  154 (437)
T ss_dssp             SSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEE
T ss_pred             CCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeecccc
Confidence            789999999999999999987   43222122 26999999999999999999998 9999999995211111111111 


Q ss_pred             ---------c--cccceeEEE--EecCCCeEEeeeCCcccceEEEEecCCCeeeeeeec--CCCccccccccccccccce
Q psy14511         78 ---------C--HLSAVKAIA--WCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKT--DSQQANDETISYREQKKRR  142 (488)
Q Consensus        78 ---------~--h~~~v~~l~--~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  142 (488)
                               .  +...+.++.  +++++..+++++.   |+.|++||+.+++.+..+..  +...               
T Consensus       155 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---d~~i~iwd~~~~~~~~~~~~~~h~~~---------------  216 (437)
T 3gre_A          155 ECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTN---LSRVIIFDIRTLERLQIIENSPRHGA---------------  216 (437)
T ss_dssp             EEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEET---TSEEEEEETTTCCEEEEEECCGGGCC---------------
T ss_pred             ceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeC---CCeEEEEeCCCCeeeEEEccCCCCCc---------------
Confidence                     1  445666666  5577877777766   99999999999988777765  2221               


Q ss_pred             eEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC--CCcEEEEECCCeE
Q psy14511        143 HLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG--YHDTLAVALDTSV  220 (488)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~v  220 (488)
                                                                                +.++.|+  +..+++++.|+.|
T Consensus       217 ----------------------------------------------------------v~~~~~s~~~~~l~s~~~dg~i  238 (437)
T 3gre_A          217 ----------------------------------------------------------VSSICIDEECCVLILGTTRGII  238 (437)
T ss_dssp             ----------------------------------------------------------EEEEEECTTSCEEEEEETTSCE
T ss_pred             ----------------------------------------------------------eEEEEECCCCCEEEEEcCCCeE
Confidence                                                                      2223333  3457788899999


Q ss_pred             EEEECCCCceEEEEecCCCCCCceEEEEEc----CCCCeEEEEeCCCCcEEEEECCcceeeeeecc--------------
Q psy14511        221 YTWNTKTNKTQLLVEYPTYDNAYISCVAWK----PRTTDLAVTNTCTEYIDLWHEQEERLIQKLRT--------------  282 (488)
Q Consensus       221 ~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~--------------  282 (488)
                      ++||+++++....+...  +...|.+++|+    |++.+++++ +.|+.|++||+++++.+..+.+              
T Consensus       239 ~iwd~~~~~~~~~~~~~--~~~~v~~~~~~~~~s~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (437)
T 3gre_A          239 DIWDIRFNVLIRSWSFG--DHAPITHVEVCQFYGKNSVIVVGG-SSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIE  315 (437)
T ss_dssp             EEEETTTTEEEEEEBCT--TCEEEEEEEECTTTCTTEEEEEEE-STTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBC
T ss_pred             EEEEcCCccEEEEEecC--CCCceEEEEeccccCCCccEEEEE-cCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccc
Confidence            99999998887776543  67789999665    457788888 9999999999998887776653              


Q ss_pred             ------------ccccEEEEEe-cCCEEEEeecCCeEEEEECcCCCccceeeecC---CccEEEEEEccCCcEEEEE
Q psy14511        283 ------------HMHQVIAMCW-NGNLLSCGTIGGNILHYDVRTHSDYPTAITRE---GDVVCGLKWSPNGRYLASG  343 (488)
Q Consensus       283 ------------~~~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---~~~i~~~~~s~~~~~l~~~  343 (488)
                                  |...|.+++| ++++|++++.|+.|++||+.+++ ....+.+|   ...+....++++..+++..
T Consensus       316 ~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (437)
T 3gre_A          316 KGLEELNFCGIRSLNALSTISVSNDKILLTDEATSSIVMFSLNELS-SSKAVISPSRFSDVFIPTQVTANLTMLLRK  391 (437)
T ss_dssp             SSGGGCCCCCCCSGGGGCCEEEETTEEEEEEGGGTEEEEEETTCGG-GCEEEECC--CCCEEEEEEEETTEEEEEEE
T ss_pred             cccccceecccccCCceEEEEECCceEEEecCCCCeEEEEECCCcc-cceEEecccccCceEEEEEeecceEEEEEe
Confidence                        4556778888 57899999999999999999864 44555543   2334444555555444443

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=9.5e-34  Score=255.49  Aligned_cols=275  Identities=11%  Similarity=0.071  Sum_probs=216.5

Q ss_pred             eEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCe
Q psy14511         38 VVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGK  116 (488)
Q Consensus        38 ~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~  116 (488)
                      ......+.+++++|++|+ |+.|++||+.+++....   +.  ...|.++.|+|+   +++++.   |++|++|+..   
T Consensus        38 ~~~~~~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~---~~--~~~v~~~~~~~~---~~s~s~---D~~i~~w~~~---  103 (343)
T 3lrv_A           38 KELNKSMYYDKWVCMCRCEDGALHFTQLKDSKTITT---IT--TPNPRTGGEHPA---IISRGP---CNRLLLLYPG---  103 (343)
T ss_dssp             EEECSSSSEEEEEEEEEEETTEEEEEEESSSSCEEE---EE--EECCCTTCCCCS---EEEECS---TTEEEEEETT---
T ss_pred             hhhhhhhcCCCCEEEEECCCCcEEEEECCCCcEEEE---Ee--cCCceeeeeCCc---eEEecC---CCeEEEEEcc---
Confidence            344456667899999998 99999999987553332   22  567888899987   555554   9999999964   


Q ss_pred             eeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCcc
Q psy14511        117 EKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSII  196 (488)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (488)
                                                                                                      
T Consensus       104 --------------------------------------------------------------------------------  103 (343)
T 3lrv_A          104 --------------------------------------------------------------------------------  103 (343)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcC--CCCeEEEEeCCCCcEEEEECCcc
Q psy14511        197 NDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKP--RTTDLAVTNTCTEYIDLWHEQEE  274 (488)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~~~~~i~i~d~~~~  274 (488)
                                           +.+.+|+..+++........  |...|.+++|+|  ++++++++ +.|+.|++||++++
T Consensus       104 ---------------------~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~s~-s~dg~i~~wd~~~~  159 (343)
T 3lrv_A          104 ---------------------NQITILDSKTNKVLREIEVD--SANEIIYMYGHNEVNTEYFIWA-DNRGTIGFQSYEDD  159 (343)
T ss_dssp             ---------------------TEEEEEETTTCCEEEEEECC--CSSCEEEEECCC---CCEEEEE-ETTCCEEEEESSSS
T ss_pred             ---------------------CceEEeecCCcceeEEeecC--CCCCEEEEEcCCCCCCCEEEEE-eCCCcEEEEECCCC
Confidence                                 23556777777755555433  677899999999  99999999 99999999999998


Q ss_pred             eeeeeec-cccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeec-CCccEEEEEEccCCcEEEEEecCeEEE
Q psy14511        275 RLIQKLR-THMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITR-EGDVVCGLKWSPNGRYLASGSNNTVKI  350 (488)
Q Consensus       275 ~~~~~~~-~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~d~~i~i  350 (488)
                      +...... .+...+.+++|  ++.++++|+.||.|++||++++......+.. |..+|.+++|+|++++|++++++.|++
T Consensus       160 ~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~i  239 (343)
T 3lrv_A          160 SQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVVC  239 (343)
T ss_dssp             CEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESSBEEE
T ss_pred             cEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEEE
Confidence            8876664 35557889999  7899999999999999999987654366777 999999999999999999999889999


Q ss_pred             EECCCCCCCcccce-----e-----eeeecCCCCEEEEEccCC-CCeEEEEeCCCcceeEEEeeccccEEEEEEcC---C
Q psy14511        351 WDFRQLDAKRPLGL-----I-----VPKLKREGRELVTSHGKQ-DCSLKMWEYPRLHLIEELKIHQERILSAVLSP---D  416 (488)
Q Consensus       351 wd~~~~~~~~~~~~-----~-----~~~~~~~~~~l~~~~g~~-~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~---~  416 (488)
                      ||+++.+....+..     .     ..+|+|+|++++++  +. ++.+++|++.+.......    .++..++|+|   +
T Consensus       240 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~--s~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~  313 (343)
T 3lrv_A          240 FDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAY--SNESNSLTIYKFDKKTKNWTK----DEESALCLQSDTAD  313 (343)
T ss_dssp             EETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEE--ETTTTEEEEEEECTTTCSEEE----EEEEECCC----CC
T ss_pred             EEcCCCCcceeecccccccccccceEEEECCCCCEEEEe--cCCCCcEEEEEEcccccceEe----cCceeEecCccccc
Confidence            99998865544332     1     25899999999994  55 899999999765543333    5688899999   8


Q ss_pred             CCEEEEEeCCCcEEEEecCC
Q psy14511        417 QTCVAAASADETISIWNCFP  436 (488)
Q Consensus       417 ~~~l~t~~~dg~v~iw~~~~  436 (488)
                      .+.+++++.||.+.++-...
T Consensus       314 ~~~l~~~~~d~~~~~~~~~~  333 (343)
T 3lrv_A          314 FTDMDVVCGDGGIAAILKTN  333 (343)
T ss_dssp             CCEEEEEEETTEEEEEEECS
T ss_pred             cceeEEEecCCceEEEEecC
Confidence            99999999999999886543

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.4e-34  Score=260.97  Aligned_cols=248  Identities=17%  Similarity=0.273  Sum_probs=198.0

Q ss_pred             ceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecC--CCeEEeeeCCcccc
Q psy14511         29 PTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPW--EPTLLATGGGICDQ  105 (488)
Q Consensus        29 ~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~l~~~~~~~~d~  105 (488)
                      ...+.+|.+.|++++|+|++++||+++ |+.|+|||+.... ...+..+.+|...|++++|+++  ++++++++.   |+
T Consensus         4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~---dg   79 (379)
T 3jrp_A            4 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGET-HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY---DG   79 (379)
T ss_dssp             -CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTE-EEEEEEECCCSSCEEEEEECCGGGCSEEEEEET---TS
T ss_pred             cEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCc-ceeeeEecCCCCcEEEEEeCCCCCCCEEEEecc---CC
Confidence            456889999999999999999999998 9999999997322 3345567889999999999977  777777776   99


Q ss_pred             eEEEEecCCCe--eeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeeccccccccccc
Q psy14511        106 TVRLWNSMNGK--EKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVK  183 (488)
Q Consensus       106 ~i~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (488)
                      .|++||+.+++  ....+..+...                                                        
T Consensus        80 ~v~iwd~~~~~~~~~~~~~~~~~~--------------------------------------------------------  103 (379)
T 3jrp_A           80 KVLIWKEENGRWSQIAVHAVHSAS--------------------------------------------------------  103 (379)
T ss_dssp             CEEEEEEETTEEEEEEEECCCSSC--------------------------------------------------------
T ss_pred             EEEEEEcCCCceeEeeeecCCCcc--------------------------------------------------------
Confidence            99999999886  33333333222                                                        


Q ss_pred             CCCceeecCCCccccceeeeeeeC----CCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcC--------
Q psy14511        184 AKPERILEAPSIINDFYTSGLDWG----YHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKP--------  251 (488)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~--------  251 (488)
                                       +.++.|+    +..+++++.|+.|++||+.++.......... |...|.+++|+|        
T Consensus       104 -----------------v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~  165 (379)
T 3jrp_A          104 -----------------VNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDA-HAIGVNSASWAPATIEEDGE  165 (379)
T ss_dssp             -----------------EEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEEC-CTTCEEEEEECCCC------
T ss_pred             -----------------eEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecC-CCCceEEEEEcCcccccccc
Confidence                             2223333    2457888899999999999885544444444 889999999999        


Q ss_pred             -----CCCeEEEEeCCCCcEEEEECCcce----eeeeeccccccEEEEEe--c---CCEEEEeecCCeEEEEECcCCCcc
Q psy14511        252 -----RTTDLAVTNTCTEYIDLWHEQEER----LIQKLRTHMHQVIAMCW--N---GNLLSCGTIGGNILHYDVRTHSDY  317 (488)
Q Consensus       252 -----~~~~l~~~~~~~~~i~i~d~~~~~----~~~~~~~~~~~v~~~~~--~---~~~l~~~~~dg~i~i~d~~~~~~~  317 (488)
                           +++.++++ +.|+.|++||++.+.    ....+.+|...|.+++|  +   +++|++++.||.|++||++.....
T Consensus       166 ~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~  244 (379)
T 3jrp_A          166 HNGTKESRKFVTG-GADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGP  244 (379)
T ss_dssp             ----CTTCEEEEE-ETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSC
T ss_pred             ccCCCCCCEEEEE-eCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCcc
Confidence                 68899988 999999999987643    55677889999999999  5   789999999999999999876422


Q ss_pred             ----ceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCC
Q psy14511        318 ----PTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQ  355 (488)
Q Consensus       318 ----~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~  355 (488)
                          ......|...|.+++|+|++++|++++ ||.|++|++..
T Consensus       245 ~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~  287 (379)
T 3jrp_A          245 WKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL  287 (379)
T ss_dssp             CEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred             ceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence                222334788899999999999999988 69999999874

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=100.00  E-value=3.4e-33  Score=252.52  Aligned_cols=313  Identities=11%  Similarity=0.110  Sum_probs=210.2

Q ss_pred             EEEcccCcccceeecccCceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEee
Q psy14511         19 HYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLAT   98 (488)
Q Consensus        19 iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~   98 (488)
                      ||++.+.+.+ ..+.+|...|.+++|+|||++||+|++..++|||+++++...     ..+...+..+++.++++.++.+
T Consensus         3 i~s~~~~~~~-~~~~~h~~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~   76 (355)
T 3vu4_A            3 LGSMITRNPI-VPENHVSNPVTDYEFNQDQSCLILSTLKSFEIYNVHPVAHIM-----SQEMRHLSKVRMLHRTNYVAFV   76 (355)
T ss_dssp             -----------------CCCCCEEEECTTSSEEEEECSSEEEEEEETTEEEEE-----EEECSCCCEEEECTTSSEEEEE
T ss_pred             cccccccCCc-cccccCCCceEEEEECCCCCEEEEEcCCEEEEEecCCcceee-----eeecCCeEEEEEcCCCCEEEEE
Confidence            5666665543 356889999999999999999999996678999987643221     1222358889999998888666


Q ss_pred             eCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccc
Q psy14511         99 GGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKL  178 (488)
Q Consensus        99 ~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (488)
                      ++.  |++|++||+.+++.+..+....                                                     
T Consensus        77 ~~~--d~~v~iWd~~~~~~~~~~~~~~-----------------------------------------------------  101 (355)
T 3vu4_A           77 TGV--KEVVHIWDDVKKQDVSRIKVDA-----------------------------------------------------  101 (355)
T ss_dssp             CSS--TTEEEEEETTTTEEEEEEECSS-----------------------------------------------------
T ss_pred             ECC--ccEEEEEECCCCcEEEEEECCC-----------------------------------------------------
Confidence            664  8999999999998776654321                                                     


Q ss_pred             cccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCC-ceEEEEecCCCCCCceEEEEEcCCCCeEE
Q psy14511        179 PRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTN-KTQLLVEYPTYDNAYISCVAWKPRTTDLA  257 (488)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~l~  257 (488)
                                           .+..+.++++.++ .+.++.|++||+.++ +....+.    .  +...+++++  ..++
T Consensus       102 ---------------------~v~~v~~~~~~~~-~~~~~~i~i~d~~~~~~~~~~~~----~--~~~~~~~s~--~~la  151 (355)
T 3vu4_A          102 ---------------------PVKDLFLSREFIV-VSYGDVISVFKFGNPWKRITDDI----R--FGGVCEFSN--GLLV  151 (355)
T ss_dssp             ---------------------CEEEEEECSSEEE-EEETTEEEEEESSTTCCBSSCCE----E--EEEEEEEET--TEEE
T ss_pred             ---------------------ceEEEEEcCCEEE-EEEcCEEEEEECCCCceeeEEec----c--CCceEEEEc--cEEE
Confidence                                 1222344444444 446889999999987 4333222    1  344566777  5676


Q ss_pred             EE-eCCCCcEEEEECCcce----------------eeeeeccccccEEEEEe--cCCEEEEeecCCe-EEEEECcCCCcc
Q psy14511        258 VT-NTCTEYIDLWHEQEER----------------LIQKLRTHMHQVIAMCW--NGNLLSCGTIGGN-ILHYDVRTHSDY  317 (488)
Q Consensus       258 ~~-~~~~~~i~i~d~~~~~----------------~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~-i~i~d~~~~~~~  317 (488)
                      ++ ++.+|.|++||+.+++                .+..+.+|...|.+++|  ++++|++++.|+. |++||+++++ .
T Consensus       152 ~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~-~  230 (355)
T 3vu4_A          152 YSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGV-L  230 (355)
T ss_dssp             EEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCC-E
T ss_pred             EeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCc-E
Confidence            64 5899999999998765                26788899999999999  7899999999998 9999999864 5


Q ss_pred             ceeee-c-CCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCC
Q psy14511        318 PTAIT-R-EGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPR  394 (488)
Q Consensus       318 ~~~~~-~-~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~  394 (488)
                      ...+. + |...|.+++|+|++++|++++ |+.|++||++.....+.. .+...+.|.  +     -...-.+..+.+. 
T Consensus       231 ~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~-~~~~~~~~~--~-----~~~~~~~~~~~~~-  301 (355)
T 3vu4_A          231 VREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRH-ALKGWINMK--Y-----FQSEWSLCNFKLS-  301 (355)
T ss_dssp             EEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSE-ETTTTEECC--C-----CCCSSCSEEEECC-
T ss_pred             EEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccc-cccceeecc--c-----cccccceeEEEec-
Confidence            55665 5 999999999999999999999 599999999865322110 000000000  0     0000001111111 


Q ss_pred             cceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCc
Q psy14511        395 LHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDK  439 (488)
Q Consensus       395 ~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~  439 (488)
                             ..+..+...++|+||+++|++++.||.+++|++.+++.
T Consensus       302 -------~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~~  339 (355)
T 3vu4_A          302 -------VDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDDE  339 (355)
T ss_dssp             -------CCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEETT
T ss_pred             -------cCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCCC
Confidence                   11223346799999999999999999999999876553

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.2e-33  Score=262.91  Aligned_cols=281  Identities=8%  Similarity=0.004  Sum_probs=217.5

Q ss_pred             ceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCccc-----------------------------------------
Q psy14511         37 DVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVN-----------------------------------------   75 (488)
Q Consensus        37 ~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~-----------------------------------------   75 (488)
                      .++.+++|+|+|++|+++.++.|++||+.+++....+..                                         
T Consensus         5 ~p~~~v~~s~dg~~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (450)
T 2vdu_B            5 HPLQNLLTSRDGSLVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSI   84 (450)
T ss_dssp             CCCCEEEECSSSSEEEEEETTEEEEEEEETTTEEEEEEEEECCC------------------------------------
T ss_pred             ccEEEEEecCCCCEEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCccc
Confidence            468899999999988888899999999987761111111                                         


Q ss_pred             -------------ccccccceeEEEEecCCCeEEeeeCCcccceEEEEecC--CCeeeeeeecCCCcccccccccccccc
Q psy14511         76 -------------NQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSM--NGKEKCHVKTDSQQANDETISYREQKK  140 (488)
Q Consensus        76 -------------~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (488)
                                   ..+|.+.|.+++|+|++++|+++++.  |+.|++||+.  +++.+..+..                 
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~--dg~v~iwd~~~~~~~~~~~~~~-----------------  145 (450)
T 2vdu_B           85 KRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADS--DKSLLVFDVDKTSKNVLKLRKR-----------------  145 (450)
T ss_dssp             ---------------CCCCCEEEEEECTTSSEEEEEEGG--GTEEEEEEECSSSSSCEEEEEE-----------------
T ss_pred             cccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECC--CCeEEEEECcCCCCceeeeeec-----------------
Confidence                         12455579999999999987666653  9999999987  5543322211                 


Q ss_pred             ceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeE
Q psy14511        141 RRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSV  220 (488)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v  220 (488)
                                                                                                      
T Consensus       146 --------------------------------------------------------------------------------  145 (450)
T 2vdu_B          146 --------------------------------------------------------------------------------  145 (450)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeee----eeccccccEEEEEe--c-
Q psy14511        221 YTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQ----KLRTHMHQVIAMCW--N-  293 (488)
Q Consensus       221 ~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~----~~~~~~~~v~~~~~--~-  293 (488)
                                      .. +...|.+++|+|++++|+++ +.+|.+++|++.+++...    .+.+|...|.+++|  + 
T Consensus       146 ----------------~~-~~~~v~~~~~sp~~~~l~~~-~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~  207 (450)
T 2vdu_B          146 ----------------FC-FSKRPNAISIAEDDTTVIIA-DKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDS  207 (450)
T ss_dssp             ----------------EE-CSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECT
T ss_pred             ----------------cc-CCCCceEEEEcCCCCEEEEE-eCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCC
Confidence                            01 56789999999999999999 889999999998876554    77889999999999  6 


Q ss_pred             --CCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccce------
Q psy14511        294 --GNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGL------  364 (488)
Q Consensus       294 --~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~------  364 (488)
                        +++|++++.|+.|++||++++......+.+|...|.+++|+ ++++|++++ |+.|++||+.+++....+..      
T Consensus       208 ~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~  286 (450)
T 2vdu_B          208 DGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKP  286 (450)
T ss_dssp             TSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGG
T ss_pred             CCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhh
Confidence              77999999999999999988654333466899999999999 999999999 69999999998764433321      


Q ss_pred             ----------------------e--eeeecCCCCEEEEEccCCCCeEEEEeC--CCc---ceeEEEeeccccEEEEEEcC
Q psy14511        365 ----------------------I--VPKLKREGRELVTSHGKQDCSLKMWEY--PRL---HLIEELKIHQERILSAVLSP  415 (488)
Q Consensus       365 ----------------------~--~~~~~~~~~~l~~~~g~~~~~i~i~d~--~~~---~~~~~~~~~~~~v~~~~~s~  415 (488)
                                            .  ...|+|++++++++ +..++.|++|++  .++   +.+..+..| ..|.+++|+|
T Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~  364 (450)
T 2vdu_B          287 YLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFF-VEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHN  364 (450)
T ss_dssp             GCCTTSBC----------CBCCCEEEEEECSSSSEEEEE-ETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEET
T ss_pred             hhhhcccccccccccccccceEEEEEEEEeCCCCEEEEE-ECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecC
Confidence                                  0  12889999999984 337999999999  555   677788888 8899999999


Q ss_pred             CCCEEEEEeC------CCcEEEEecCCC
Q psy14511        416 DQTCVAAASA------DETISIWNCFPR  437 (488)
Q Consensus       416 ~~~~l~t~~~------dg~v~iw~~~~~  437 (488)
                      ++.++++++.      +..|.+|.+...
T Consensus       365 ~~~~v~~~~~~~~~~~~~~i~v~~~~~~  392 (450)
T 2vdu_B          365 DEFQVTLDNKESSGVQKNFAKFIEYNLN  392 (450)
T ss_dssp             TEEEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred             CcEEEEEecccCCCCCCcceEEEEEEcC
Confidence            6544444443      456899987643

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=100.00  E-value=1.3e-33  Score=257.91  Aligned_cols=266  Identities=16%  Similarity=0.243  Sum_probs=213.1

Q ss_pred             CceEEEeecCCeEEEEEccc-CcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccc
Q psy14511          5 GNLLSCGTIGGNILHYDVRT-HSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSA   82 (488)
Q Consensus         5 g~~la~g~~dg~i~iwd~~~-~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~   82 (488)
                      |++||+|+.||.|+|||+.+ +..+...+.+|...|.+++|+|++++|++++ |+.|++||+.+++..    ...+|...
T Consensus        54 g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~----~~~~~~~~  129 (368)
T 3mmy_A           54 GNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAI----QIAQHDAP  129 (368)
T ss_dssp             SEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE----EEEECSSC
T ss_pred             ceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCce----eeccccCc
Confidence            79999999999999999998 5545477889999999999999999999998 999999999875432    25669999


Q ss_pred             eeEEEE--ecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceec
Q psy14511         83 VKAIAW--CPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLN  160 (488)
Q Consensus        83 v~~l~~--~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (488)
                      |.+++|  +|+++++++++.   |+.|++||+.+++.+..+..+..                                  
T Consensus       130 v~~~~~~~~~~~~~l~~~~~---dg~i~vwd~~~~~~~~~~~~~~~----------------------------------  172 (368)
T 3mmy_A          130 VKTIHWIKAPNYSCVMTGSW---DKTLKFWDTRSSNPMMVLQLPER----------------------------------  172 (368)
T ss_dssp             EEEEEEEECSSCEEEEEEET---TSEEEEECSSCSSCSEEEECSSC----------------------------------
T ss_pred             eEEEEEEeCCCCCEEEEccC---CCcEEEEECCCCcEEEEEecCCC----------------------------------
Confidence            999999  889887777776   99999999998887666554311                                  


Q ss_pred             cccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCC
Q psy14511        161 QSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYD  240 (488)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~  240 (488)
                                                              ...+.+....+++++.++.+++|++............. .
T Consensus       173 ----------------------------------------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~  211 (368)
T 3mmy_A          173 ----------------------------------------CYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESP-L  211 (368)
T ss_dssp             ----------------------------------------EEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCS-C
T ss_pred             ----------------------------------------ceEEEecCCeeEEEeCCCcEEEEEeccccchhhhcccc-c
Confidence                                                    11233334578888899999999998876544333322 5


Q ss_pred             CCceEEEEEcCCCCe----EEEEeCCCCcEEEEECCcc---eeeeeeccccc------------cEEEEEe--cCCEEEE
Q psy14511        241 NAYISCVAWKPRTTD----LAVTNTCTEYIDLWHEQEE---RLIQKLRTHMH------------QVIAMCW--NGNLLSC  299 (488)
Q Consensus       241 ~~~i~~~~~~~~~~~----l~~~~~~~~~i~i~d~~~~---~~~~~~~~~~~------------~v~~~~~--~~~~l~~  299 (488)
                      .....++++.++...    ++++ +.|+.|++||++..   .....+..|..            .|.+++|  ++++|++
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~-~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s  290 (368)
T 3mmy_A          212 KHQHRCVAIFKDKQNKPTGFALG-SIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLAT  290 (368)
T ss_dssp             SSCEEEEEEEECTTSCEEEEEEE-ETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEE
T ss_pred             cCCCceEEEcccCCCCCCeEEEe-cCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEE
Confidence            566777777666554    8888 99999999999876   55666777766            7999999  6889999


Q ss_pred             eecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECC
Q psy14511        300 GTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFR  354 (488)
Q Consensus       300 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~  354 (488)
                      ++.||.|++||++++ .....+..|..+|.+++|+|++++|++++ |+..+.|++.
T Consensus       291 ~~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~  345 (368)
T 3mmy_A          291 VGSDGRFSFWDKDAR-TKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFY  345 (368)
T ss_dssp             EETTSCEEEEETTTT-EEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGGC
T ss_pred             EccCCeEEEEECCCC-cEEEEecCCCCCceEEEECCCCCeEEEEeccccccccccc
Confidence            999999999999985 46778889999999999999999999998 4544444433

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=100.00  E-value=1.9e-32  Score=252.82  Aligned_cols=271  Identities=16%  Similarity=0.255  Sum_probs=207.9

Q ss_pred             EEEEEEccCCcEEE-Eec-CCeEEEEecccc-CcCCCcccccccccceeEEEEec-CCCeEEeeeCCcccceEEEEecCC
Q psy14511         39 VCGLKWSPNGRYLA-SGS-NNTVKIWDFRQL-DAKRPQVNNQCHLSAVKAIAWCP-WEPTLLATGGGICDQTVRLWNSMN  114 (488)
Q Consensus        39 V~~l~~sp~g~~la-s~~-d~~i~vwd~~~~-~~~~~~~~~~~h~~~v~~l~~~~-~~~~l~~~~~~~~d~~i~vwd~~~  114 (488)
                      ...++++|+...++ +++ ||.|+||++... +....+..+.+|.+.|.+++|+| ++++|++++.   |++|++||+.+
T Consensus        37 ~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~---dg~v~vw~~~~  113 (402)
T 2aq5_A           37 SGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSE---DCTVMVWEIPD  113 (402)
T ss_dssp             SCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEET---TSEEEEEECCT
T ss_pred             CCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeC---CCeEEEEEccC
Confidence            45688898876555 455 999999999653 22245556788999999999999 7776666665   99999999987


Q ss_pred             CeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCC
Q psy14511        115 GKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPS  194 (488)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (488)
                      +.......                                                                        
T Consensus       114 ~~~~~~~~------------------------------------------------------------------------  121 (402)
T 2aq5_A          114 GGLVLPLR------------------------------------------------------------------------  121 (402)
T ss_dssp             TCCSSCBC------------------------------------------------------------------------
T ss_pred             CCCccccC------------------------------------------------------------------------
Confidence            64221000                                                                        


Q ss_pred             ccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCC-CeEEEEeCCCCcEEEEECCc
Q psy14511        195 IINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRT-TDLAVTNTCTEYIDLWHEQE  273 (488)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~~~~~i~i~d~~~  273 (488)
                                                        +....+  .+ |...|.+++|+|++ +.++++ +.|+.|++||+++
T Consensus       122 ----------------------------------~~~~~~--~~-h~~~v~~~~~~p~~~~~l~s~-~~dg~i~iwd~~~  163 (402)
T 2aq5_A          122 ----------------------------------EPVITL--EG-HTKRVGIVAWHPTAQNVLLSA-GCDNVILVWDVGT  163 (402)
T ss_dssp             ----------------------------------SCSEEE--EC-CSSCEEEEEECSSBTTEEEEE-ETTSCEEEEETTT
T ss_pred             ----------------------------------CceEEe--cC-CCCeEEEEEECcCCCCEEEEE-cCCCEEEEEECCC
Confidence                                              001111  12 88899999999998 577777 9999999999999


Q ss_pred             ceeeeee--ccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceee-ecCCcc-EEEEEEccCCcEEEEE---e
Q psy14511        274 ERLIQKL--RTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAI-TREGDV-VCGLKWSPNGRYLASG---S  344 (488)
Q Consensus       274 ~~~~~~~--~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~-i~~~~~s~~~~~l~~~---~  344 (488)
                      ++.+..+  ..|...|.+++|  ++++|++++.||.|++||++++. ....+ ..|... +.+++|+|++++|+++   +
T Consensus       164 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~  242 (402)
T 2aq5_A          164 GAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGT-VVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRM  242 (402)
T ss_dssp             TEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTE-EEEEEECSSCSSSCCEEEECSTTEEEEEEECTT
T ss_pred             CCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCc-eeeeeccCCCCCcceEEEEcCCCcEEEEeccCC
Confidence            9999999  789999999999  78999999999999999999864 44555 677665 8899999999999988   3


Q ss_pred             -cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEE-eeccccEEEEEEcCCCCEEEE
Q psy14511        345 -NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEEL-KIHQERILSAVLSPDQTCVAA  422 (488)
Q Consensus       345 -d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~t  422 (488)
                       |+.|++||+++.+                                      .++... ..|...+.+++|+|++++|++
T Consensus       243 ~d~~i~iwd~~~~~--------------------------------------~~~~~~~~~~~~~v~~~~~s~~~~~l~~  284 (402)
T 2aq5_A          243 SERQVALWDTKHLE--------------------------------------EPLSLQELDTSSGVLLPFFDPDTNIVYL  284 (402)
T ss_dssp             CCEEEEEEETTBCS--------------------------------------SCSEEEECCCCSSCEEEEEETTTTEEEE
T ss_pred             CCceEEEEcCcccc--------------------------------------CCceEEeccCCCceeEEEEcCCCCEEEE
Confidence             4777777766431                                      011111 236677999999999999975


Q ss_pred             -EeCCCcEEEEecCCCCc-c-cc--ccccCCcceEEeecCCCce
Q psy14511        423 -ASADETISIWNCFPRDK-K-RK--ARQVGSGSSLEFAILKQPV  461 (488)
Q Consensus       423 -~~~dg~v~iw~~~~~~~-~-~~--~~~~~~v~~~~~s~~~~~~  461 (488)
                       ++.||.|++||+.++++ . ..  ..+...+.+++|+|++..+
T Consensus       285 ~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~  328 (402)
T 2aq5_A          285 CGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLE  328 (402)
T ss_dssp             EETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSC
T ss_pred             EEcCCCeEEEEEecCCCcceEeecccccCCcccceEEecccccc
Confidence             55799999999999884 2 22  2356899999999998775

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=100.00  E-value=1.4e-33  Score=264.72  Aligned_cols=276  Identities=14%  Similarity=0.273  Sum_probs=199.1

Q ss_pred             ccCCceEEEeecCCeEEEEEcccCcc----------cceeecccC------------ceEEEEEEccCC--cEEEEec-C
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTHSD----------YPTAITREG------------DVVCGLKWSPNG--RYLASGS-N   56 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~~~----------~~~~~~~h~------------~~V~~l~~sp~g--~~las~~-d   56 (488)
                      +.||++||+|+.||.|+|||+.+++.          ....+.+|.            +.|++++|+|++  .+|++++ |
T Consensus        37 s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d  116 (447)
T 3dw8_B           37 NHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTND  116 (447)
T ss_dssp             CSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECS
T ss_pred             CCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCC
Confidence            34899999999999999999987662          345678898            889999999998  7888888 9


Q ss_pred             CeEEEEeccccCcCCC------------------------------------c-ccccccccceeEEEEecCCCeEEeee
Q psy14511         57 NTVKIWDFRQLDAKRP------------------------------------Q-VNNQCHLSAVKAIAWCPWEPTLLATG   99 (488)
Q Consensus        57 ~~i~vwd~~~~~~~~~------------------------------------~-~~~~~h~~~v~~l~~~~~~~~l~~~~   99 (488)
                      +.|++||+.++.....                                    . ....+|...|.+++|+|++++++++ 
T Consensus       117 ~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-  195 (447)
T 3dw8_B          117 KTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-  195 (447)
T ss_dssp             SCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-
T ss_pred             CeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-
Confidence            9999999976332100                                    0 1135799999999999999876664 


Q ss_pred             CCcccceEEEEecCCC-eeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccc
Q psy14511        100 GGICDQTVRLWNSMNG-KEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKL  178 (488)
Q Consensus       100 ~~~~d~~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (488)
                      .   |+.|++||+.++ +....+.....     .                                              
T Consensus       196 ~---d~~i~iwd~~~~~~~~~~~~~~~~-----~----------------------------------------------  221 (447)
T 3dw8_B          196 D---DLRINLWHLEITDRSFNIVDIKPA-----N----------------------------------------------  221 (447)
T ss_dssp             C---SSEEEEEETTEEEEEEEEEECCCS-----S----------------------------------------------
T ss_pred             C---CCeEEEEECCCCCceeeeeecccc-----c----------------------------------------------
Confidence            5   999999999843 33222211100     0                                              


Q ss_pred             cccccCCCceeecCCCccccceeeeeeeCC---CcEEEEECCCeEEEEECCCCce----EEEEecCCCCCC---------
Q psy14511        179 PRKVKAKPERILEAPSIINDFYTSGLDWGY---HDTLAVALDTSVYTWNTKTNKT----QLLVEYPTYDNA---------  242 (488)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~v~iw~~~~~~~----~~~~~~~~~~~~---------  242 (488)
                                     -......+.++.|++   ..+++++.|+.|++||+.+++.    ...+..   +..         
T Consensus       222 ---------------~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~---~~~~~~~~~~~~  283 (447)
T 3dw8_B          222 ---------------MEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEE---PEDPSNRSFFSE  283 (447)
T ss_dssp             ---------------GGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECC---C-----CCHHHH
T ss_pred             ---------------ccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEecc---CCCccccccccc
Confidence                           000111234455554   3577788999999999998875    444443   443         


Q ss_pred             ---ceEEEEEcCCCCeEEEEeCCCCcEEEEECCc-ceeeeeecccccc---------------EEEEEe--cCCEEEEee
Q psy14511        243 ---YISCVAWKPRTTDLAVTNTCTEYIDLWHEQE-ERLIQKLRTHMHQ---------------VIAMCW--NGNLLSCGT  301 (488)
Q Consensus       243 ---~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~-~~~~~~~~~~~~~---------------v~~~~~--~~~~l~~~~  301 (488)
                         .|.+++|+|++++|+++ +. +.|++||++. ++++..+..|...               +..++|  ++++|++++
T Consensus       284 ~~~~v~~~~~s~~g~~l~~~-~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s  361 (447)
T 3dw8_B          284 IISSISDVKFSHSGRYMMTR-DY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGS  361 (447)
T ss_dssp             HTTCEEEEEECTTSSEEEEE-ES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEEC
T ss_pred             cCceEEEEEECCCCCEEEEe-eC-CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEec
Confidence               89999999999999988 66 9999999997 7888888877542               223666  789999999


Q ss_pred             cCCeEEEEECcCCCccceeee---------------------------------cCCccEEEEEEccCCcEEEEEecCeE
Q psy14511        302 IGGNILHYDVRTHSDYPTAIT---------------------------------REGDVVCGLKWSPNGRYLASGSNNTV  348 (488)
Q Consensus       302 ~dg~i~i~d~~~~~~~~~~~~---------------------------------~~~~~i~~~~~s~~~~~l~~~~d~~i  348 (488)
                      .||.|++||+.+++..  .+.                                 .+...|..++|+|++.+||+++.+.+
T Consensus       362 ~dg~v~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~~  439 (447)
T 3dw8_B          362 YNNFFRMFDRNTKRDI--TLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNNL  439 (447)
T ss_dssp             STTEEEEEETTTCCEE--EEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSCE
T ss_pred             cCCEEEEEEcCCCcce--eeeecccccccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEeccee
Confidence            9999999999876421  222                                 22345677888888888887776667


Q ss_pred             EEEECC
Q psy14511        349 KIWDFR  354 (488)
Q Consensus       349 ~iwd~~  354 (488)
                      ++|..+
T Consensus       440 ~~~~~~  445 (447)
T 3dw8_B          440 YIFQDK  445 (447)
T ss_dssp             EEEECC
T ss_pred             eeeccc
Confidence            777643

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=100.00  E-value=8.5e-33  Score=249.74  Aligned_cols=263  Identities=13%  Similarity=0.057  Sum_probs=212.1

Q ss_pred             cCCceEEEeecCCeEEEEEcccCcc--cceeecccCceEEEEEEccCCc-EEEEec-CCeEEEEec-cccCcCCCccccc
Q psy14511          3 WNGNLLSCGTIGGNILHYDVRTHSD--YPTAITREGDVVCGLKWSPNGR-YLASGS-NNTVKIWDF-RQLDAKRPQVNNQ   77 (488)
Q Consensus         3 ~dg~~la~g~~dg~i~iwd~~~~~~--~~~~~~~h~~~V~~l~~sp~g~-~las~~-d~~i~vwd~-~~~~~~~~~~~~~   77 (488)
                      .||++||+|+.||.|+|||+.++..  ....+.+|...|.+++|+|+++ +|++++ |+.|++||+ .+++.    ..+.
T Consensus        21 ~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~----~~~~   96 (342)
T 1yfq_A           21 PSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF----QALT   96 (342)
T ss_dssp             GGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE----EECB
T ss_pred             CCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce----Eecc
Confidence            3899999999999999999987761  1234568999999999999999 999998 999999999 76432    4467


Q ss_pred             c--cccceeEEEEecCCCeEEeeeCCcccceEEEEecCC---------CeeeeeeecCCCccccccccccccccceeEEE
Q psy14511         78 C--HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMN---------GKEKCHVKTDSQQANDETISYREQKKRRHLSF  146 (488)
Q Consensus        78 ~--h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (488)
                      +  |...|.+++|+| ++.+++++.   |+.|++||+.+         ++.+..+.                        
T Consensus        97 ~~~~~~~v~~l~~~~-~~~l~s~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~------------------------  148 (342)
T 1yfq_A           97 NNEANLGICRICKYG-DDKLIAASW---DGLIEVIDPRNYGDGVIAVKNLNSNNTK------------------------  148 (342)
T ss_dssp             SCCCCSCEEEEEEET-TTEEEEEET---TSEEEEECHHHHTTBCEEEEESCSSSSS------------------------
T ss_pred             ccCCCCceEEEEeCC-CCEEEEEcC---CCeEEEEcccccccccccccCCeeeEEe------------------------
Confidence            7  999999999999 877777776   99999999865         22211111                        


Q ss_pred             EEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECC
Q psy14511        147 LLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTK  226 (488)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~  226 (488)
                                                                        ....+.++.++++.+++++.++.|++||+.
T Consensus       149 --------------------------------------------------~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~  178 (342)
T 1yfq_A          149 --------------------------------------------------VKNKIFTMDTNSSRLIVGMNNSQVQWFRLP  178 (342)
T ss_dssp             --------------------------------------------------SCCCEEEEEECSSEEEEEESTTEEEEEESS
T ss_pred             --------------------------------------------------eCCceEEEEecCCcEEEEeCCCeEEEEECC
Confidence                                                              112344566777778999999999999999


Q ss_pred             C-CceEEEEecCCCCCCceEEEEEcC-CCCeEEEEeCCCCcEEEEECCcc------eeeeeeccccc---------cEEE
Q psy14511        227 T-NKTQLLVEYPTYDNAYISCVAWKP-RTTDLAVTNTCTEYIDLWHEQEE------RLIQKLRTHMH---------QVIA  289 (488)
Q Consensus       227 ~-~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~~i~i~d~~~~------~~~~~~~~~~~---------~v~~  289 (488)
                      + +.......... +...+.+++|+| ++++++++ +.+|.|++|+++..      +....+..|..         .|.+
T Consensus       179 ~~~~~~~~~~~~~-~~~~i~~i~~~~~~~~~l~~~-~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  256 (342)
T 1yfq_A          179 LCEDDNGTIEESG-LKYQIRDVALLPKEQEGYACS-SIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNS  256 (342)
T ss_dssp             CCTTCCCEEEECS-CSSCEEEEEECSGGGCEEEEE-ETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEE
T ss_pred             ccccccceeeecC-CCCceeEEEECCCCCCEEEEE-ecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEE
Confidence            8 55432222223 778999999999 99999999 89999999999876      67777777755         9999


Q ss_pred             EEe--cCCEEEEeecCCeEEEEECcCCCccceeeecC-CccEEEEEEccCCcEEEEEe-cCe-EEEEE
Q psy14511        290 MCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITRE-GDVVCGLKWSPNGRYLASGS-NNT-VKIWD  352 (488)
Q Consensus       290 ~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~~i~~~~~s~~~~~l~~~~-d~~-i~iwd  352 (488)
                      ++|  ++++|++++.||.|++||+.++ .....+..| ..+|.+++  |++++|++++ |+. .+.+.
T Consensus       257 ~~~s~~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~~~~~~~  321 (342)
T 1yfq_A          257 IEFSPRHKFLYTAGSDGIISCWNLQTR-KKIKNFAKFNEDSVVKIA--CSDNILCLATSDDTFKTNAA  321 (342)
T ss_dssp             EEECTTTCCEEEEETTSCEEEEETTTT-EEEEECCCCSSSEEEEEE--ECSSEEEEEEECTHHHHCSS
T ss_pred             EEEcCCCCEEEEecCCceEEEEcCccH-hHhhhhhcccCCCceEec--CCCCeEEEEecCCccccccc
Confidence            999  6899999999999999999986 456677887 99999999  9999999998 687 55544

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=100.00  E-value=5.3e-33  Score=258.41  Aligned_cols=272  Identities=16%  Similarity=0.327  Sum_probs=209.5

Q ss_pred             eeecccCceEEEEEEccC-CcEEEEec-CCeEEEEecccc-------CcCCCcccccccccceeEEEEecCCCeEEeeeC
Q psy14511         30 TAITREGDVVCGLKWSPN-GRYLASGS-NNTVKIWDFRQL-------DAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGG  100 (488)
Q Consensus        30 ~~~~~h~~~V~~l~~sp~-g~~las~~-d~~i~vwd~~~~-------~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~  100 (488)
                      .....|.+.|++++|+|+ +++||+++ ||.|++||+.+.       .....+..+.+|...|.+++|+|+++.++++++
T Consensus       122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~  201 (430)
T 2xyi_A          122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS  201 (430)
T ss_dssp             EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred             EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence            345689999999999997 78999998 999999999762       113455567889999999999999983444444


Q ss_pred             CcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccc
Q psy14511        101 GICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPR  180 (488)
Q Consensus       101 ~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (488)
                      .  ||.|++|++..+.......                                                          
T Consensus       202 ~--dg~i~vwd~~~~~~~~~~~----------------------------------------------------------  221 (430)
T 2xyi_A          202 D--DHTICLWDINATPKEHRVI----------------------------------------------------------  221 (430)
T ss_dssp             T--TSCEEEEETTSCCBGGGEE----------------------------------------------------------
T ss_pred             C--CCeEEEEeCCCCCCCCcee----------------------------------------------------------
Confidence            3  9999999997643110000                                                          


Q ss_pred             cccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcC-CCCeEEEE
Q psy14511        181 KVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKP-RTTDLAVT  259 (488)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~  259 (488)
                                                                        .....+.+ |...|.+++|+| ++..++++
T Consensus       222 --------------------------------------------------~~~~~~~~-h~~~v~~v~~~p~~~~~l~s~  250 (430)
T 2xyi_A          222 --------------------------------------------------DAKNIFTG-HTAVVEDVAWHLLHESLFGSV  250 (430)
T ss_dssp             --------------------------------------------------ECSEEECC-CSSCEEEEEECSSCTTEEEEE
T ss_pred             --------------------------------------------------ccceeecC-CCCCEeeeEEeCCCCCEEEEE
Confidence                                                              00001112 788899999999 55666666


Q ss_pred             eCCCCcEEEEECCcc---eeeeeeccccccEEEEEe--cCC-EEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEE
Q psy14511        260 NTCTEYIDLWHEQEE---RLIQKLRTHMHQVIAMCW--NGN-LLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKW  333 (488)
Q Consensus       260 ~~~~~~i~i~d~~~~---~~~~~~~~~~~~v~~~~~--~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~  333 (488)
                       +.++.|++||++++   +.+..+..|...+.+++|  ++. ++++|+.||.|++||+++.......+..|...|.+++|
T Consensus       251 -~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~  329 (430)
T 2xyi_A          251 -ADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQW  329 (430)
T ss_dssp             -ETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEE
T ss_pred             -eCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEE
Confidence             89999999999986   567777889999999999  344 79999999999999999866778889999999999999


Q ss_pred             ccCCc-EEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEE
Q psy14511        334 SPNGR-YLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSA  411 (488)
Q Consensus       334 s~~~~-~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~  411 (488)
                      +|+++ +|++++ |+.|++||+...........                 ..+        ...+++..+.+|...|+++
T Consensus       330 sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-----------------~~~--------~~~~~~~~~~~h~~~v~~~  384 (430)
T 2xyi_A          330 SPHNETILASSGTDRRLHVWDLSKIGEEQSTED-----------------AED--------GPPELLFIHGGHTAKISDF  384 (430)
T ss_dssp             CSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHH-----------------HHH--------CCTTEEEECCCCSSCEEEE
T ss_pred             CCCCCCEEEEEeCCCcEEEEeCCCCccccCccc-----------------ccc--------CCcceEEEcCCCCCCceEE
Confidence            99995 677777 69999999876421110000                 000        0135566778899999999


Q ss_pred             EEcCCCC-EEEEEeCCCcEEEEecCCCC
Q psy14511        412 VLSPDQT-CVAAASADETISIWNCFPRD  438 (488)
Q Consensus       412 ~~s~~~~-~l~t~~~dg~v~iw~~~~~~  438 (488)
                      +|+|+++ +|++++.||.|++|++.+..
T Consensus       385 ~~~p~~~~~l~s~s~dg~i~iw~~~~~~  412 (430)
T 2xyi_A          385 SWNPNEPWIICSVSEDNIMQVWQMAENV  412 (430)
T ss_dssp             EECSSSTTEEEEEETTSEEEEEEECHHH
T ss_pred             EECCCCCCEEEEEECCCCEEEeEccccc
Confidence            9999999 89999999999999997543

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=100.00  E-value=7.2e-32  Score=241.03  Aligned_cols=273  Identities=19%  Similarity=0.356  Sum_probs=212.5

Q ss_pred             EEEEEEccCCcEEEEecCCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeee
Q psy14511         39 VCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEK  118 (488)
Q Consensus        39 V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~  118 (488)
                      .++|+||+++ +||+|.|++|+|||+++++..+. ..+.+|...|++++|+|+++++++++.   |++|++||+++++.+
T Consensus        28 ~~~l~WS~~~-~lAvg~D~tV~iWd~~tg~~~~~-~~~~~~~~~V~~v~~~~~~~~l~sgs~---Dg~v~iw~~~~~~~~  102 (318)
T 4ggc_A           28 LNLVDWSSGN-VLAVALDNSVYLWSASSGDILQL-LQMEQPGEYISSVAWIKEGNYLAVGTS---SAEVQLWDVQQQKRL  102 (318)
T ss_dssp             CBCEEECTTS-EEEEEETTEEEEEETTTCCEEEE-EECCSTTCCEEEEEECTTSSEEEEEET---TSEEEEEETTTTEEE
T ss_pred             ceEEEECCCC-EEEEEeCCEEEEEECCCCCEEEE-EEecCCCCeEEEEEECCCCCEEEEEEC---CCcEEEeecCCceeE
Confidence            5779999986 88888899999999998764433 235678899999999999998877776   999999999999988


Q ss_pred             eeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCcccc
Q psy14511        119 CHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIIND  198 (488)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (488)
                      ..+..+....                                                                      
T Consensus       103 ~~~~~h~~~~----------------------------------------------------------------------  112 (318)
T 4ggc_A          103 RNMTSHSARV----------------------------------------------------------------------  112 (318)
T ss_dssp             EEEECCSSCE----------------------------------------------------------------------
T ss_pred             EEecCccceE----------------------------------------------------------------------
Confidence            7776653211                                                                      


Q ss_pred             ceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCccee--
Q psy14511        199 FYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERL--  276 (488)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~--  276 (488)
                         ..+.+.+..+++++.++.+++|+......... ...+ |...+..+.+++++++++++ +.|+.|++||+++++.  
T Consensus       113 ---~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~l~s~-~~d~~i~iwd~~~~~~~~  186 (318)
T 4ggc_A          113 ---GSLSWNSYILSSGSRSGHIHHHDVRVAEHHVA-TLSG-HSQEVCGLRWAPDGRHLASG-GNDNLVNVWPSAPGEGGW  186 (318)
T ss_dssp             ---EEEEEETTEEEEEETTSEEEEEETTSSSCEEE-EEEC-CSSCEEEEEECTTSSEEEEE-ETTSCEEEEESSCBTTBS
T ss_pred             ---EEeecCCCEEEEEecCCceEeeecCCCceeEE-EEcC-ccCceEEEEEcCCCCEEEEE-ecCcceeEEECCCCcccc
Confidence               11223345677888999999999887654322 2233 88899999999999999999 9999999999987653  


Q ss_pred             --eeeeccccccEEEEEe---cCCEE--EEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe---cC
Q psy14511        277 --IQKLRTHMHQVIAMCW---NGNLL--SCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS---NN  346 (488)
Q Consensus       277 --~~~~~~~~~~v~~~~~---~~~~l--~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~---d~  346 (488)
                        ......+...+.++.+   ++..+  ++++.++.|++||.+...  ......+...+..+.|+|+++.+++++   |+
T Consensus       187 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~  264 (318)
T 4ggc_A          187 VPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA--CLSAVDAHSQVCSILWSPHYKELISGHGFAQN  264 (318)
T ss_dssp             CCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCC--EEEEEECSSCEEEEEEETTTTEEEEEECTTTC
T ss_pred             cceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccc--ccccccceeeeeeeeecccccceEEEEEcCCC
Confidence              3444567888998888   23443  466788999999998754  334455667799999999999887764   59


Q ss_pred             eEEEEECCCCCCCccccee---e--eeecCCCCEEEEEccCCCCeEEEEeCCCcc
Q psy14511        347 TVKIWDFRQLDAKRPLGLI---V--PKLKREGRELVTSHGKQDCSLKMWEYPRLH  396 (488)
Q Consensus       347 ~i~iwd~~~~~~~~~~~~~---~--~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~  396 (488)
                      .|++||+++++....+..+   +  .+|+|++++|++  ++.|++|++||+.+..
T Consensus       265 ~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S--~s~D~~v~iWd~~~~d  317 (318)
T 4ggc_A          265 QLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVAS--AAADETLRLWRCFELD  317 (318)
T ss_dssp             CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEE--EETTTEEEEECCSCCC
T ss_pred             EEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEE--EecCCeEEEEECCCCC
Confidence            9999999988665554432   1  289999999999  7899999999997654

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=100.00  E-value=5.4e-33  Score=251.79  Aligned_cols=290  Identities=14%  Similarity=0.220  Sum_probs=197.5

Q ss_pred             ccCCceEEEeecCCeEEEEEcccCcc---cceeecccCceEEEEEEcc--CCcEEEEec-CCeEEEEeccccCcC-----
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTHSD---YPTAITREGDVVCGLKWSP--NGRYLASGS-NNTVKIWDFRQLDAK-----   70 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~~~---~~~~~~~h~~~V~~l~~sp--~g~~las~~-d~~i~vwd~~~~~~~-----   70 (488)
                      +.||++||+|+.||.|+|||+.++..   ....+.+|...|.+++|+|  ++++|++++ |+.|++||+.+++..     
T Consensus        20 ~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~   99 (351)
T 3f3f_A           20 DFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRR   99 (351)
T ss_dssp             CSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCS
T ss_pred             cCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccC
Confidence            34899999999999999999987642   3345679999999999999  699999998 999999999875422     


Q ss_pred             -CCcccccccccceeEEEEecC--CCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEE
Q psy14511         71 -RPQVNNQCHLSAVKAIAWCPW--EPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFL  147 (488)
Q Consensus        71 -~~~~~~~~h~~~v~~l~~~~~--~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (488)
                       ..+..+.+|...|.+++|+|+  ++++++++.   |+.|++||+.+++.+..+...... ....               
T Consensus       100 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~---dg~v~iwd~~~~~~~~~~~~~~~~-~~~~---------------  160 (351)
T 3f3f_A          100 WNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGN---DGILRLYDALEPSDLRSWTLTSEM-KVLS---------------  160 (351)
T ss_dssp             EEEEEEECCCSSCEEEEEECCGGGCSEEEEEET---TCEEEEEECSSTTCTTCCEEEEEE-ESCS---------------
T ss_pred             cceeeeecccCCceeEEEEcCCCCCcEEEEecC---CCcEEEecCCChHHhccccccccc-cccc---------------
Confidence             234556789999999999999  888777776   999999999887755443321000 0000               


Q ss_pred             EeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC-----CCcEEEEECCCeEEE
Q psy14511        148 LHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG-----YHDTLAVALDTSVYT  222 (488)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~d~~v~i  222 (488)
                                                                  .........+.++.|+     +..+++++.++.+.+
T Consensus       161 --------------------------------------------~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~  196 (351)
T 3f3f_A          161 --------------------------------------------IPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIY  196 (351)
T ss_dssp             --------------------------------------------CCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEE
T ss_pred             --------------------------------------------cccCCcccceeEEEeccCCCCCcEEEEecCCCcEEE
Confidence                                                        0000011112233332     456777889999988


Q ss_pred             EECCCCceEEEEecCCCCCCceEEEEEcCCC----CeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCE
Q psy14511        223 WNTKTNKTQLLVEYPTYDNAYISCVAWKPRT----TDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNL  296 (488)
Q Consensus       223 w~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~  296 (488)
                      |+...++......+.+ |...|++++|+|++    ++++++ +.||.|++||++.+........+.........  ....
T Consensus       197 ~~~~~~~~~~~~~~~~-h~~~i~~~~~~p~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (351)
T 3f3f_A          197 QRGKDGKLHVAAKLPG-HKSLIRSISWAPSIGRWYQLIATG-CKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDM  274 (351)
T ss_dssp             EECTTSCEEEEEECCC-CCSCEEEEEECCCSSCSSEEEEEE-ETTSCEEEEEEEECC-----------------------
T ss_pred             EccCCCceeeeeecCC-CCcceeEEEECCCCCCcceEEEEE-cCCCeEEEEeCCCCcCccccCCcccceeccCCCccccc
Confidence            9888888766667766 89999999999998    678888 99999999999876554443333222222222  1222


Q ss_pred             EEE----eecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCC
Q psy14511        297 LSC----GTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLD  357 (488)
Q Consensus       297 l~~----~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~  357 (488)
                      +..    +.....+.+|+.... .....+.+|...|++++|+|++++|++++ |+.|++||+.+.+
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~  339 (351)
T 3f3f_A          275 DAQGRSDSNTEEKAELQSNLQV-ELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSN  339 (351)
T ss_dssp             ----------------CCSEEE-EEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTS
T ss_pred             ccccccccccceeeeecccccc-cEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCc
Confidence            222    233344555555443 45667888999999999999999999999 6999999998764

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=100.00  E-value=1e-31  Score=250.88  Aligned_cols=302  Identities=11%  Similarity=0.077  Sum_probs=224.2

Q ss_pred             eecCCeEEEEEcc--cCc-ccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcc--ccccccccee
Q psy14511         11 GTIGGNILHYDVR--THS-DYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQV--NNQCHLSAVK   84 (488)
Q Consensus        11 g~~dg~i~iwd~~--~~~-~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~--~~~~h~~~v~   84 (488)
                      ++.++.+.||.+.  ++. .....+..+ ..+.+++|+|+++++++++ ++.|++||+.+++......  .+.+|.+.|.
T Consensus        95 ~~~~~~~~l~~~d~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~  173 (433)
T 3bws_A           95 KPEELNEKLIALDKEGITHRFISRFKTG-FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVE  173 (433)
T ss_dssp             SGGGGTTCEEECCBTTCSEEEEEEEECS-SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEE
T ss_pred             ccCCCceEEEEECCCCCcceEEEEEcCC-CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCcee
Confidence            3444533445443  332 122333344 3466999999888888877 8899999998765433211  3457889999


Q ss_pred             EEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccc
Q psy14511         85 AIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKR  164 (488)
Q Consensus        85 ~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (488)
                      +++|+|+++.+++.+.   |+.|++||+.+++....+.                                          
T Consensus       174 ~~~~~~~~~~~~s~~~---d~~v~~~d~~~~~~~~~~~------------------------------------------  208 (433)
T 3bws_A          174 TISIPEHNELWVSQMQ---ANAVHVFDLKTLAYKATVD------------------------------------------  208 (433)
T ss_dssp             EEEEGGGTEEEEEEGG---GTEEEEEETTTCCEEEEEE------------------------------------------
T ss_pred             EEEEcCCCEEEEEECC---CCEEEEEECCCceEEEEEc------------------------------------------
Confidence            9999999876555554   9999999987765432221                                          


Q ss_pred             cccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCce
Q psy14511        165 TVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYI  244 (488)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i  244 (488)
                                                                                               . +...+
T Consensus       209 -------------------------------------------------------------------------~-~~~~~  214 (433)
T 3bws_A          209 -------------------------------------------------------------------------L-TGKWS  214 (433)
T ss_dssp             -------------------------------------------------------------------------C-SSSSE
T ss_pred             -------------------------------------------------------------------------C-CCCCe
Confidence                                                                                     1 56678


Q ss_pred             EEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEee--------cCCeEEEEECcCC
Q psy14511        245 SCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGT--------IGGNILHYDVRTH  314 (488)
Q Consensus       245 ~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~--------~dg~i~i~d~~~~  314 (488)
                      .+++|+|+++.++++++.++.|++||+++++.+..+..+ ..+.++++  +++.+++++        .|+.|++||+.++
T Consensus       215 ~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~  293 (433)
T 3bws_A          215 KILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKE  293 (433)
T ss_dssp             EEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTT
T ss_pred             eEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCC
Confidence            999999999999777578999999999998888887654 45888888  678888887        4889999999875


Q ss_pred             CccceeeecCCccEEEEEEccCCcEEEEE-e-cCeEEEEECCCCCCCccccee----eeeecCCCCEEEEEccCC-----
Q psy14511        315 SDYPTAITREGDVVCGLKWSPNGRYLASG-S-NNTVKIWDFRQLDAKRPLGLI----VPKLKREGRELVTSHGKQ-----  383 (488)
Q Consensus       315 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~-d~~i~iwd~~~~~~~~~~~~~----~~~~~~~~~~l~~~~g~~-----  383 (488)
                      + .... ..+...+.+++|+|+++.++.+ + ++.+++||+.+++....+...    ..+|+|++++++++....     
T Consensus       294 ~-~~~~-~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~  371 (433)
T 3bws_A          294 K-LIDT-IGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTE  371 (433)
T ss_dssp             E-EEEE-EEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTT
T ss_pred             c-EEee-ccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCcccc
Confidence            3 3332 3445578899999999766544 5 599999999977544333211    228999999888853222     


Q ss_pred             --------CCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeC-CCcEEEEecCC
Q psy14511        384 --------DCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASA-DETISIWNCFP  436 (488)
Q Consensus       384 --------~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~-dg~v~iw~~~~  436 (488)
                              ||.|++||+.+++.+..+.. ...+.+++|+|++++|++++. |+.|++|+++.
T Consensus       372 ~~~~~g~~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~  432 (433)
T 3bws_A          372 GYLKKGLVLGKVYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG  432 (433)
T ss_dssp             CTTSCCSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred             ccccccccceEEEEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence                    57999999999999888876 457999999999999998875 99999999864

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=7e-32  Score=247.38  Aligned_cols=254  Identities=16%  Similarity=0.247  Sum_probs=200.3

Q ss_pred             cccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecC--CCeeeeeeecCCCccccccccccccccceeEEEEEee
Q psy14511         73 QVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSM--NGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHG  150 (488)
Q Consensus        73 ~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (488)
                      +..+.+|.+.|.+++|+|++++|++++.   |+.|++||+.  +++....+..+...+                      
T Consensus         4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~---dg~i~iw~~~~~~~~~~~~~~~h~~~v----------------------   58 (379)
T 3jrp_A            4 VVIANAHNELIHDAVLDYYGKRLATCSS---DKTIKIFEVEGETHKLIDTLTGHEGPV----------------------   58 (379)
T ss_dssp             -CCEEECCCCEEEEEECSSSSEEEEEET---TSCEEEEEEETTEEEEEEEECCCSSCE----------------------
T ss_pred             cEEecCCcccEEEEEEcCCCCEEEEEEC---CCcEEEEecCCCcceeeeEecCCCCcE----------------------
Confidence            4457889999999999999998877776   9999999997  444444444443322                      


Q ss_pred             eeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC----CCcEEEEECCCeEEEEECC
Q psy14511        151 FEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG----YHDTLAVALDTSVYTWNTK  226 (488)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~d~~v~iw~~~  226 (488)
                                                                         .++.|+    ...+++++.|+.|++||+.
T Consensus        59 ---------------------------------------------------~~~~~~~~~~~~~l~s~~~dg~v~iwd~~   87 (379)
T 3jrp_A           59 ---------------------------------------------------WRVDWAHPKFGTILASCSYDGKVLIWKEE   87 (379)
T ss_dssp             ---------------------------------------------------EEEEECCGGGCSEEEEEETTSCEEEEEEE
T ss_pred             ---------------------------------------------------EEEEeCCCCCCCEEEEeccCCEEEEEEcC
Confidence                                                               223332    3567788899999999999


Q ss_pred             CCceEEEEecCCCCCCceEEEEEcCC--CCeEEEEeCCCCcEEEEECCcce--eeeeeccccccEEEEEec---------
Q psy14511        227 TNKTQLLVEYPTYDNAYISCVAWKPR--TTDLAVTNTCTEYIDLWHEQEER--LIQKLRTHMHQVIAMCWN---------  293 (488)
Q Consensus       227 ~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~~~~~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~---------  293 (488)
                      +++......... |...|.+++|+|+  ++.++++ +.|+.|++||+....  ....+..|...+.+++|.         
T Consensus        88 ~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~  165 (379)
T 3jrp_A           88 NGRWSQIAVHAV-HSASVNSVQWAPHEYGPLLLVA-SSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGE  165 (379)
T ss_dssp             TTEEEEEEEECC-CSSCEEEEEECCGGGCSEEEEE-ETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC------
T ss_pred             CCceeEeeeecC-CCcceEEEEeCCCCCCCEEEEe-cCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcccccccc
Confidence            998555555555 8899999999999  8999999 999999999998863  445567899999999993         


Q ss_pred             ------CCEEEEeecCCeEEEEECcCCCc---cceeeecCCccEEEEEEccC---CcEEEEEe-cCeEEEEECCCCCCCc
Q psy14511        294 ------GNLLSCGTIGGNILHYDVRTHSD---YPTAITREGDVVCGLKWSPN---GRYLASGS-NNTVKIWDFRQLDAKR  360 (488)
Q Consensus       294 ------~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~~i~~~~~s~~---~~~l~~~~-d~~i~iwd~~~~~~~~  360 (488)
                            ++.+++++.||.|++||++....   ....+..|...|.+++|+|+   +++|++++ |+.|++||+++.....
T Consensus       166 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~  245 (379)
T 3jrp_A          166 HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPW  245 (379)
T ss_dssp             ----CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCC
T ss_pred             ccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccc
Confidence                  68999999999999999987542   34567789999999999999   89999998 6899999987542100


Q ss_pred             ccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCC
Q psy14511        361 PLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRD  438 (488)
Q Consensus       361 ~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~  438 (488)
                                                        ...+.....|...|++++|+|++++|++++.||.|++|++....
T Consensus       246 ----------------------------------~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~  289 (379)
T 3jrp_A          246 ----------------------------------KKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG  289 (379)
T ss_dssp             ----------------------------------EEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETT
T ss_pred             ----------------------------------eeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCC
Confidence                                              00111223478899999999999999999999999999998543

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=100.00  E-value=3.3e-31  Score=239.49  Aligned_cols=274  Identities=11%  Similarity=0.120  Sum_probs=185.4

Q ss_pred             EEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCcccccccccccccc
Q psy14511         61 IWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKK  140 (488)
Q Consensus        61 vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (488)
                      ||++.+   ..++.....|...|.+++|+||+++++ ++.   +..+++|++.+++........  ..            
T Consensus         3 i~s~~~---~~~~~~~~~h~~~V~~v~fs~dg~~la-~g~---~~~~~iw~~~~~~~~~~~~~~--~~------------   61 (355)
T 3vu4_A            3 LGSMIT---RNPIVPENHVSNPVTDYEFNQDQSCLI-LST---LKSFEIYNVHPVAHIMSQEMR--HL------------   61 (355)
T ss_dssp             -------------------CCCCCEEEECTTSSEEE-EEC---SSEEEEEEETTEEEEEEEECS--CC------------
T ss_pred             cccccc---cCCccccccCCCceEEEEECCCCCEEE-EEc---CCEEEEEecCCcceeeeeecC--Ce------------
Confidence            455544   334445678999999999999998655 555   456899998877654332211  00            


Q ss_pred             ceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcE-EEEECCCe
Q psy14511        141 RRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDT-LAVALDTS  219 (488)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~  219 (488)
                                                                                 ....+.++.+.+ ++++.++.
T Consensus        62 -----------------------------------------------------------~~~~~~~~~~~~~~~~~~d~~   82 (355)
T 3vu4_A           62 -----------------------------------------------------------SKVRMLHRTNYVAFVTGVKEV   82 (355)
T ss_dssp             -----------------------------------------------------------CEEEECTTSSEEEEECSSTTE
T ss_pred             -----------------------------------------------------------EEEEEcCCCCEEEEEECCccE
Confidence                                                                       011122223344 44557889


Q ss_pred             EEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcc-eeeeeeccccccEEEEEecCCEEE
Q psy14511        220 VYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEE-RLIQKLRTHMHQVIAMCWNGNLLS  298 (488)
Q Consensus       220 v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~~~~l~  298 (488)
                      |++||..+++....+.    +...|.+++++++.  ++++  .++.|++||+.++ +.+..+.. ...+.+++  ...++
T Consensus        83 v~iWd~~~~~~~~~~~----~~~~v~~v~~~~~~--~~~~--~~~~i~i~d~~~~~~~~~~~~~-~~~~~~~s--~~~la  151 (355)
T 3vu4_A           83 VHIWDDVKKQDVSRIK----VDAPVKDLFLSREF--IVVS--YGDVISVFKFGNPWKRITDDIR-FGGVCEFS--NGLLV  151 (355)
T ss_dssp             EEEEETTTTEEEEEEE----CSSCEEEEEECSSE--EEEE--ETTEEEEEESSTTCCBSSCCEE-EEEEEEEE--TTEEE
T ss_pred             EEEEECCCCcEEEEEE----CCCceEEEEEcCCE--EEEE--EcCEEEEEECCCCceeeEEecc-CCceEEEE--ccEEE
Confidence            9999999998877766    55689999998864  4444  4789999999987 66666655 33334443  36666


Q ss_pred             E--eecCCeEEEEECcCCC--------------cc-ceeeecCCccEEEEEEccCCcEEEEEe-cCe-EEEEECCCCCCC
Q psy14511        299 C--GTIGGNILHYDVRTHS--------------DY-PTAITREGDVVCGLKWSPNGRYLASGS-NNT-VKIWDFRQLDAK  359 (488)
Q Consensus       299 ~--~~~dg~i~i~d~~~~~--------------~~-~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~-i~iwd~~~~~~~  359 (488)
                      +  |+.+|.|++||++++.              .+ ...+.+|..+|.+++|+|+|++|++++ |++ |++||+      
T Consensus       152 ~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~------  225 (355)
T 3vu4_A          152 YSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKT------  225 (355)
T ss_dssp             EEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEET------
T ss_pred             EeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEEC------
Confidence            6  6899999999998753              12 677889999999999999999999886 354 555554      


Q ss_pred             cccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEe-e-ccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCC
Q psy14511        360 RPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELK-I-HQERILSAVLSPDQTCVAAASADETISIWNCFPR  437 (488)
Q Consensus       360 ~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~-~-~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~  437 (488)
                                                       .+++++.++. + |...|++++|+||+++|++++.|+.|++||+..+
T Consensus       226 ---------------------------------~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~  272 (355)
T 3vu4_A          226 ---------------------------------EDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFND  272 (355)
T ss_dssp             ---------------------------------TTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred             ---------------------------------CCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence                                             4556677777 5 9999999999999999999999999999999876


Q ss_pred             Cccccc------------------------cccCCcceEEeecCCCceEEE
Q psy14511        438 DKKRKA------------------------RQVGSGSSLEFAILKQPVSLT  464 (488)
Q Consensus       438 ~~~~~~------------------------~~~~~v~~~~~s~~~~~~~~~  464 (488)
                      ......                        ....+...++|+++++.+...
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~  323 (355)
T 3vu4_A          273 QDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVW  323 (355)
T ss_dssp             SCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEE
T ss_pred             CCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEE
Confidence            432110                        011223678999998877554

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=100.00  E-value=1.4e-32  Score=252.23  Aligned_cols=253  Identities=12%  Similarity=0.047  Sum_probs=170.1

Q ss_pred             EEEccCCcEEEEec-CCeEEEEeccccCcC--CCcccccccccceeEEEEec--------CCCeEEeeeCCcccceEEEE
Q psy14511         42 LKWSPNGRYLASGS-NNTVKIWDFRQLDAK--RPQVNNQCHLSAVKAIAWCP--------WEPTLLATGGGICDQTVRLW  110 (488)
Q Consensus        42 l~~sp~g~~las~~-d~~i~vwd~~~~~~~--~~~~~~~~h~~~v~~l~~~~--------~~~~l~~~~~~~~d~~i~vw  110 (488)
                      ..+++++++||+++ |++|+|||.++++..  ..+..+.+|.+.|++++|+|        |++.|++++.   |++|++|
T Consensus        95 ~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~---D~tv~~W  171 (393)
T 4gq1_A           95 NSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGD---DCTLIIW  171 (393)
T ss_dssp             --CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEET---TSEEEEE
T ss_pred             eecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEEC---CCeEEEE
Confidence            34445677899998 999999999875432  23456789999999999998        6766666655   9999999


Q ss_pred             ecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceee
Q psy14511        111 NSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERIL  190 (488)
Q Consensus       111 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (488)
                      |+.++.+...+..                                                                   
T Consensus       172 d~~~~~~~~~~~~-------------------------------------------------------------------  184 (393)
T 4gq1_A          172 RLTDEGPILAGYP-------------------------------------------------------------------  184 (393)
T ss_dssp             EEETTEEEEEEEE-------------------------------------------------------------------
T ss_pred             ECCCCceeeeecC-------------------------------------------------------------------
Confidence            9876654322211                                                                   


Q ss_pred             cCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCC-eEEEEeCCCCcEEEE
Q psy14511        191 EAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTT-DLAVTNTCTEYIDLW  269 (488)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~~~~~i~i~  269 (488)
                                                                       |..++.+++|+|++. +|+++ +.|+.|++|
T Consensus       185 -------------------------------------------------~~~~v~~v~~~p~~~~~l~~~-~~d~~v~~w  214 (393)
T 4gq1_A          185 -------------------------------------------------LSSPGISVQFRPSNPNQLIVG-ERNGNIRIF  214 (393)
T ss_dssp             -------------------------------------------------CSSCEEEEEEETTEEEEEEEE-ETTSEEEEE
T ss_pred             -------------------------------------------------CCCCcEEEEECCCCCceEEec-CCCCEEEEE
Confidence                                                             566788888888775 45555 888888888


Q ss_pred             ECCcceeeee-------------------------eccccccEEEEEe---cCCEEEEeecCCeEEEEECcCCCccceee
Q psy14511        270 HEQEERLIQK-------------------------LRTHMHQVIAMCW---NGNLLSCGTIGGNILHYDVRTHSDYPTAI  321 (488)
Q Consensus       270 d~~~~~~~~~-------------------------~~~~~~~v~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~  321 (488)
                      |+++++....                         ..+|...+.++.|   +++.+++++.|+.+++||+.... ....+
T Consensus       215 d~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~-~~~~l  293 (393)
T 4gq1_A          215 DWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANN-DYNEI  293 (393)
T ss_dssp             ETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC----------
T ss_pred             ECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCC-CCceE
Confidence            8876543322                         2356677788887   68999999999999999998753 55666


Q ss_pred             ecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccceeeeeecC-CCCEEEEEccCCCCeEEEEeCCCcceeEE
Q psy14511        322 TREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKR-EGRELVTSHGKQDCSLKMWEYPRLHLIEE  400 (488)
Q Consensus       322 ~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~l~~~~g~~~~~i~i~d~~~~~~~~~  400 (488)
                      ..|...+..+.+.|+.+.+......                  ....++| .+..++++ |+.|+.|++||+.+++.+..
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~s-gs~Dg~V~lwd~~~~~~~~~  354 (393)
T 4gq1_A          294 SDSTMKLGPKNLLPNVQGISLFPSL------------------LGACPHPRYMDYFATA-HSQHGLIQLINTYEKDSNSI  354 (393)
T ss_dssp             ----------CCSCSEEEECSSCCS------------------SCCEECSSCTTEEEEE-ETTTTEEEEEETTCTTCCEE
T ss_pred             eeecCccccEEEccccccccccCcc------------------eeEEEccCCCCEEEEE-ECCCCEEEEEECCCCcEEEE
Confidence            7777778888888876544322210                  0112333 33333332 88999999999999999999


Q ss_pred             EeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecC
Q psy14511        401 LKIHQERILSAVLSPDQTCVAAASADETISIWNCF  435 (488)
Q Consensus       401 ~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~  435 (488)
                      +.+|..+|.+++|||||++||+++.|| +.+|.+.
T Consensus       355 ~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL~  388 (393)
T 4gq1_A          355 PIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLM  388 (393)
T ss_dssp             EEECSSCEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred             ecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence            999999999999999999999999776 6666654

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=100.00  E-value=8.4e-32  Score=231.05  Aligned_cols=267  Identities=10%  Similarity=0.033  Sum_probs=182.7

Q ss_pred             EEEeecCCeEEEEEcccCc--ccceeecccCceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCcccccccccceeE
Q psy14511          8 LSCGTIGGNILHYDVRTHS--DYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKA   85 (488)
Q Consensus         8 la~g~~dg~i~iwd~~~~~--~~~~~~~~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~   85 (488)
                      +++++ ...|++|+..+..  ...+.+.+|..+|..+.+.||-.-|+...        +-           .-|...|++
T Consensus        57 ~~~~~-~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~--------~~-----------~~~~~~v~s  116 (356)
T 2w18_A           57 IITAC-EDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVA--------LG-----------NLEIREIRA  116 (356)
T ss_dssp             EEEEE-SSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEE--------EC-----------SSSEEEEEE
T ss_pred             EEEec-cceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeee--------ec-----------cccccceEE
Confidence            45555 7789999999873  24567889999999999999865443221        10           114578999


Q ss_pred             EEEecC----CCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecc
Q psy14511         86 IAWCPW----EPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQ  161 (488)
Q Consensus        86 l~~~~~----~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (488)
                      ++|+||    ++.+++.+.     .+++|++.+++                                             
T Consensus       117 la~spd~~~~~~~l~s~g~-----~~~v~~l~~g~---------------------------------------------  146 (356)
T 2w18_A          117 LFCSSDDESEKQVLLKSGN-----IKAVLGLTKRR---------------------------------------------  146 (356)
T ss_dssp             ECC------CCEEEEEEEE-----EEEEEEETTTE---------------------------------------------
T ss_pred             EEECCCccccccEEEeCCC-----eEEEEecCCCc---------------------------------------------
Confidence            999999    877766543     48889886554                                             


Q ss_pred             ccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEE---CCCeEEEEEC-CCCceEEEEecC
Q psy14511        162 SKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVA---LDTSVYTWNT-KTNKTQLLVEYP  237 (488)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~~v~iw~~-~~~~~~~~~~~~  237 (488)
                                                                       ++..+   .|+.|++|++ .+++....... 
T Consensus       147 -------------------------------------------------lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~-  176 (356)
T 2w18_A          147 -------------------------------------------------LVSSSGTLSDQQVEVMTFAEDGGGKENQFL-  176 (356)
T ss_dssp             -------------------------------------------------EEEEESSSTTCEEEEEEECTTSCEEEEEEE-
T ss_pred             -------------------------------------------------EEEecccCCCCcEEEEEECCCCceeeeecc-
Confidence                                                             33433   4899999999 44776665554 


Q ss_pred             CCCCCceEEEEEcC---CCCeEEEEeCCCCcEEEEECCcceeeeeeccccc---cEEEEEe--cCCEEEEeecCCeEEEE
Q psy14511        238 TYDNAYISCVAWKP---RTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMH---QVIAMCW--NGNLLSCGTIGGNILHY  309 (488)
Q Consensus       238 ~~~~~~i~~~~~~~---~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~---~v~~~~~--~~~~l~~~~~dg~i~i~  309 (488)
                        |...++.++|+|   ++..|+++ +.|++|++||++++++++++.+|..   .+.+++|  ++.++++++.+..  +|
T Consensus       177 --~~~~v~~l~fs~~~g~~~~LaSg-S~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~--~w  251 (356)
T 2w18_A          177 --MPPEETILTFAEVQGMQEALLGT-TIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCA--KE  251 (356)
T ss_dssp             --CCCSSCEEEEEEEETSTTEEEEE-ETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC--------
T ss_pred             --CCCceeeEEeeccCCCCceEEEe-cCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCC--cc
Confidence              777888888888   77888888 9999999999999999998876432   2222233  3333333332110  01


Q ss_pred             ECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCC------------CCEE
Q psy14511        310 DVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKRE------------GREL  376 (488)
Q Consensus       310 d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~------------~~~l  376 (488)
                                                   .+++++ |+++++||..+++...   .....+ |+            +..+
T Consensus       252 -----------------------------~laSGs~D~tIklWd~~tgk~l~---v~~~~~-p~Gh~~~~lsg~~sg~~l  298 (356)
T 2w18_A          252 -----------------------------SESLRSPVFQLIVINPKTTLSVG---VMLYCL-PPGQAGRFLEGDVKDHCA  298 (356)
T ss_dssp             -----------------------------------CCEEEEEEETTTTEEEE---EEEECC-CTTCCCCEEEEEEETTEE
T ss_pred             -----------------------------eeeccCCCcEEEEEECCCCEEEE---EEEeec-cCCCcceeEccccCCCEE
Confidence                                         235666 5889999988774322   111111 32            3455


Q ss_pred             EEEccCCCCeEEEEeCCCcceeEEEeeccccEE-EEEEcCCCCEEEEEeCCCcEEEEec
Q psy14511        377 VTSHGKQDCSLKMWEYPRLHLIEELKIHQERIL-SAVLSPDQTCVAAASADETISIWNC  434 (488)
Q Consensus       377 ~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~t~~~dg~v~iw~~  434 (488)
                      ++  ++.|++|+|||+.+++++.++.+|...+. .++|||||++|++|+.|++|+|||+
T Consensus       299 AS--gS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~  355 (356)
T 2w18_A          299 AA--ILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY  355 (356)
T ss_dssp             EE--EETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred             EE--EcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence            66  78999999999999999999999987655 5899999999999999999999996

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=100.00  E-value=8.4e-33  Score=253.61  Aligned_cols=254  Identities=11%  Similarity=0.097  Sum_probs=172.9

Q ss_pred             cCCceEEEeecCCeEEEEEcccCccc----ceeecccCceEEEEEEcc--------CCcEEEEec-CCeEEEEeccccCc
Q psy14511          3 WNGNLLSCGTIGGNILHYDVRTHSDY----PTAITREGDVVCGLKWSP--------NGRYLASGS-NNTVKIWDFRQLDA   69 (488)
Q Consensus         3 ~dg~~la~g~~dg~i~iwd~~~~~~~----~~~~~~h~~~V~~l~~sp--------~g~~las~~-d~~i~vwd~~~~~~   69 (488)
                      .++++||+|+.|++|+|||+.+++..    ...+.+|.+.|.+++|+|        |+++||+++ |++|+|||+.++. 
T Consensus        99 ~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~-  177 (393)
T 4gq1_A           99 VYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEG-  177 (393)
T ss_dssp             EEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTE-
T ss_pred             CCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCc-
Confidence            36789999999999999999887543    234689999999999998        899999999 9999999997643 


Q ss_pred             CCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEe
Q psy14511         70 KRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLH  149 (488)
Q Consensus        70 ~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (488)
                        ++..+.+|..+|.+++|+|++..++++++.  |++|++||+.+++................+.+..            
T Consensus       178 --~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~--d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~------------  241 (393)
T 4gq1_A          178 --PILAGYPLSSPGISVQFRPSNPNQLIVGER--NGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNT------------  241 (393)
T ss_dssp             --EEEEEEECSSCEEEEEEETTEEEEEEEEET--TSEEEEEETTCCC----------CSCCCSEEEES------------
T ss_pred             --eeeeecCCCCCcEEEEECCCCCceEEecCC--CCEEEEEECCCCcccccccccCCcccceEEeccc------------
Confidence              344456788999999999998765666653  9999999999887654433321111110000000            


Q ss_pred             eeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCc
Q psy14511        150 GFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNK  229 (488)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~  229 (488)
                                                                                         ..           
T Consensus       242 -------------------------------------------------------------------~~-----------  243 (393)
T 4gq1_A          242 -------------------------------------------------------------------LP-----------  243 (393)
T ss_dssp             -------------------------------------------------------------------GG-----------
T ss_pred             -------------------------------------------------------------------cc-----------
Confidence                                                                               00           


Q ss_pred             eEEEEecCCCCCCceEEEEEc-CCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe----------------
Q psy14511        230 TQLLVEYPTYDNAYISCVAWK-PRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW----------------  292 (488)
Q Consensus       230 ~~~~~~~~~~~~~~i~~~~~~-~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~----------------  292 (488)
                      ........+ +...+.++.|+ |+++.++++ +.|+.+++||+..++....+..|...+..+.+                
T Consensus       244 ~~~~~~~~~-~~~~v~~v~~~~~dg~~l~s~-s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (393)
T 4gq1_A          244 LVNTCHSSG-IASSLANVRWIGSDGSGILAM-CKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGA  321 (393)
T ss_dssp             GC------C-CSSSCSEEEEETTTTCEEEEE-CTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCC
T ss_pred             ceeeeeccc-ccccceeeeeecCCCCEEEEE-eCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeE
Confidence            000011112 77788899886 799999998 99999999999887766666555444433221                


Q ss_pred             ------cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECC
Q psy14511        293 ------NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFR  354 (488)
Q Consensus       293 ------~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~  354 (488)
                            ++.++++|+.||.|++||+.++. .......|..+|.+++|+|||++||+++++.+.+|.+.
T Consensus       322 ~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~-~~~~~~~~~~~V~svafspdG~~LA~as~~Gv~lvrL~  388 (393)
T 4gq1_A          322 CPHPRYMDYFATAHSQHGLIQLINTYEKD-SNSIPIQLGMPIVDFCWHQDGSHLAIATEGSVLLTRLM  388 (393)
T ss_dssp             EECSSCTTEEEEEETTTTEEEEEETTCTT-CCEEEEECSSCEEEEEECTTSSEEEEEESSEEEEEEEG
T ss_pred             EEccCCCCEEEEEECCCCEEEEEECCCCc-EEEEecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEe
Confidence                  23467788899999999999864 56667778889999999999999999998888888765

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.1e-32  Score=271.47  Aligned_cols=247  Identities=18%  Similarity=0.280  Sum_probs=196.3

Q ss_pred             eeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecC--CCeEEeeeCCcccce
Q psy14511         30 TAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPW--EPTLLATGGGICDQT  106 (488)
Q Consensus        30 ~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~l~~~~~~~~d~~  106 (488)
                      ..+.+|.+.|++++|+|+|++|++|+ ||.|+|||+.++. ...+..+.+|.++|.+++|+|+  ++++++++.   ||.
T Consensus         3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~-~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~---Dg~   78 (753)
T 3jro_A            3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGET-HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY---DGK   78 (753)
T ss_dssp             -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTE-EEEEEEECCCSSCEEEEEECCTTSCSEEEEEET---TSC
T ss_pred             eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCC-CccceeccCCcCceEEEEecCCCCCCEEEEEeC---CCe
Confidence            45789999999999999999999998 9999999997422 3445567889999999999988  877777776   999


Q ss_pred             EEEEecCCCe--eeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccC
Q psy14511        107 VRLWNSMNGK--EKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKA  184 (488)
Q Consensus       107 i~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (488)
                      |++||+.+++  ....+..+...+.                                                       
T Consensus        79 I~vwd~~~~~~~~~~~~~~h~~~V~-------------------------------------------------------  103 (753)
T 3jro_A           79 VLIWKEENGRWSQIAVHAVHSASVN-------------------------------------------------------  103 (753)
T ss_dssp             EEEEEEETTEEEEEEEECCCSSCEE-------------------------------------------------------
T ss_pred             EEEEECCCCcccccccccCCCCCeE-------------------------------------------------------
Confidence            9999998876  3333333322222                                                       


Q ss_pred             CCceeecCCCccccceeeeeeeC----CCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcC---------
Q psy14511        185 KPERILEAPSIINDFYTSGLDWG----YHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKP---------  251 (488)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~---------  251 (488)
                                        ++.|+    +..+++++.||.|++||+.++.........+ |...|.+++|+|         
T Consensus       104 ------------------~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~-~~~~v~~l~~~p~~~~~~~~~  164 (753)
T 3jro_A          104 ------------------SVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDA-HAIGVNSASWAPATIEEDGEH  164 (753)
T ss_dssp             ------------------EEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEEC-CSSCEEEEEECCCC-------
T ss_pred             ------------------EEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeec-CCCceEEEEecCccccccccc
Confidence                              23333    3467888899999999999885444444444 889999999999         


Q ss_pred             ----CCCeEEEEeCCCCcEEEEECCcc----eeeeeeccccccEEEEEe--c---CCEEEEeecCCeEEEEECcCCCc--
Q psy14511        252 ----RTTDLAVTNTCTEYIDLWHEQEE----RLIQKLRTHMHQVIAMCW--N---GNLLSCGTIGGNILHYDVRTHSD--  316 (488)
Q Consensus       252 ----~~~~l~~~~~~~~~i~i~d~~~~----~~~~~~~~~~~~v~~~~~--~---~~~l~~~~~dg~i~i~d~~~~~~--  316 (488)
                          +++.++++ +.||.|++||++++    .....+.+|...|.+++|  +   ++++++++.||.|++||++++..  
T Consensus       165 ~~~~d~~~l~sg-s~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~  243 (753)
T 3jro_A          165 NGTKESRKFVTG-GADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPW  243 (753)
T ss_dssp             --CGGGCCEEEE-ETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCC
T ss_pred             ccCCCCCEEEEE-ECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcc
Confidence                58889998 99999999999876    566778899999999999  4   78999999999999999987532  


Q ss_pred             --cceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCC
Q psy14511        317 --YPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQ  355 (488)
Q Consensus       317 --~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~  355 (488)
                        .......|...|.+++|+|++++|++++ ||.|++||+..
T Consensus       244 ~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~  285 (753)
T 3jro_A          244 KKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL  285 (753)
T ss_dssp             BCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred             eeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence              2333455888899999999999999998 69999999984

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=100.00  E-value=1e-30  Score=247.96  Aligned_cols=330  Identities=14%  Similarity=0.117  Sum_probs=243.1

Q ss_pred             ccCCceEEEeecCCeEEEEEcccCcccceeec-ccCceEEEEEEccCCcEEEEec-CCeEEEEec--cccCcCCCccccc
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAIT-REGDVVCGLKWSPNGRYLASGS-NNTVKIWDF--RQLDAKRPQVNNQ   77 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~-~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~--~~~~~~~~~~~~~   77 (488)
                      ++++.++++++.|++|.+||..+++.+ ..+. +|.  +.+++|+|||++|++++ |+.|.+||+  .+++   .+..+.
T Consensus       146 ~p~~~~~vs~~~d~~V~v~D~~t~~~~-~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~---~~~~i~  219 (543)
T 1nir_A          146 DLPNLFSVTLRDAGQIALVDGDSKKIV-KVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPT---KVAEIK  219 (543)
T ss_dssp             CGGGEEEEEEGGGTEEEEEETTTCCEE-EEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCE---EEEEEE
T ss_pred             CCCCEEEEEEcCCCeEEEEECCCceEE-EEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCc---EEEEEe
Confidence            457889999999999999999998865 4454 554  89999999999999998 999999999  5543   333344


Q ss_pred             ccccceeEEEEec----CCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeec
Q psy14511         78 CHLSAVKAIAWCP----WEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEI  153 (488)
Q Consensus        78 ~h~~~v~~l~~~~----~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (488)
                       +...+..++|+|    ||+++++++..  +++|.+||..+++.+..+...........+.+                  
T Consensus       220 -~g~~p~~va~sp~~~~dg~~l~v~~~~--~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~------------------  278 (543)
T 1nir_A          220 -IGIEARSVESSKFKGYEDRYTIAGAYW--PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHP------------------  278 (543)
T ss_dssp             -CCSEEEEEEECCSTTCTTTEEEEEEEE--SSEEEEEETTTCCEEEEEECCEECSSSCCEES------------------
T ss_pred             -cCCCcceEEeCCCcCCCCCEEEEEEcc--CCeEEEEeccccccceeecccCcccCcccccc------------------
Confidence             345689999999    99998888753  89999999999988777654311100000000                  


Q ss_pred             cccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC--CCcEE-EEECCCeEEEEECCCCce
Q psy14511        154 DRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG--YHDTL-AVALDTSVYTWNTKTNKT  230 (488)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~d~~v~iw~~~~~~~  230 (488)
                                                                  ...+..+.++  ...++ +...++.|.+||..+.+.
T Consensus       279 --------------------------------------------~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~  314 (543)
T 1nir_A          279 --------------------------------------------EPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDN  314 (543)
T ss_dssp             --------------------------------------------CCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSS
T ss_pred             --------------------------------------------CCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCc
Confidence                                                        0011122222  23333 344789999999988765


Q ss_pred             EEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecc----ccccEEEEEe-c-CCEEEEee-cC
Q psy14511        231 QLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRT----HMHQVIAMCW-N-GNLLSCGT-IG  303 (488)
Q Consensus       231 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~----~~~~v~~~~~-~-~~~l~~~~-~d  303 (488)
                      .......  +...+..++|+|+++++++++..+++|.+||..+++++..+..    |.+....+.. + +..++++. .|
T Consensus       315 l~~~~i~--~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d  392 (543)
T 1nir_A          315 LTVTSIG--AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGD  392 (543)
T ss_dssp             CEEEEEE--CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSS
T ss_pred             ceeEEec--cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCC
Confidence            4433332  4556888999999999887757789999999999998888764    5444444433 4 56666665 57


Q ss_pred             CeEEEEECcCC------CccceeeecCCccEEEEEEccCCcEEEEEe--------cCeEEEEECCCCCCC-ccc------
Q psy14511        304 GNILHYDVRTH------SDYPTAITREGDVVCGLKWSPNGRYLASGS--------NNTVKIWDFRQLDAK-RPL------  362 (488)
Q Consensus       304 g~i~i~d~~~~------~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--------d~~i~iwd~~~~~~~-~~~------  362 (488)
                      ++|.+||+.+.      .+.+..+..|...+..++++|++++|++++        +++|.+||+.+.+.. ..+      
T Consensus       393 ~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~  472 (543)
T 1nir_A          393 GSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWA  472 (543)
T ss_dssp             SEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHH
T ss_pred             ceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhc
Confidence            99999999872      246778888888888999999999999987        479999999988765 222      


Q ss_pred             -------ceeeeeecCCCCEEEEEcc---CCCCeEEEEeCCCcceeEEEeec
Q psy14511        363 -------GLIVPKLKREGRELVTSHG---KQDCSLKMWEYPRLHLIEELKIH  404 (488)
Q Consensus       363 -------~~~~~~~~~~~~~l~~~~g---~~~~~i~i~d~~~~~~~~~~~~~  404 (488)
                             ......|+|+|+.++++..   +.++.|.|||.++++++.+++.+
T Consensus       473 ~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~~  524 (543)
T 1nir_A          473 DLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDP  524 (543)
T ss_dssp             CCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECCT
T ss_pred             ccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEeecCC
Confidence                   1112299999999998643   45899999999999999988754

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.1e-31  Score=241.94  Aligned_cols=260  Identities=10%  Similarity=0.050  Sum_probs=189.2

Q ss_pred             cCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccC------cCCCccc
Q psy14511          3 WNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLD------AKRPQVN   75 (488)
Q Consensus         3 ~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~------~~~~~~~   75 (488)
                      .|+++||+|+.||+|++||+.+++.+.. +.  ...|.++.|+|+   +++++ |++|++|+.....      ....+..
T Consensus        46 ~d~~~l~sg~~Dg~v~iwd~~~~~~~~~-~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~  119 (343)
T 3lrv_A           46 YDKWVCMCRCEDGALHFTQLKDSKTITT-IT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLRE  119 (343)
T ss_dssp             EEEEEEEEEEETTEEEEEEESSSSCEEE-EE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEE
T ss_pred             CCCCEEEEECCCCcEEEEECCCCcEEEE-Ee--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEE
Confidence            3789999999999999999999885533 33  467888999998   88887 9999999876311      1111212


Q ss_pred             -ccccccceeEEEEec--CCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeee
Q psy14511         76 -NQCHLSAVKAIAWCP--WEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFE  152 (488)
Q Consensus        76 -~~~h~~~v~~l~~~~--~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (488)
                       ..+|.+.|.+++|+|  +++++++++.   |++|++||+++++.......+                            
T Consensus       120 ~~~~~~~~v~~~~~~~~~~~~~l~s~s~---dg~i~~wd~~~~~~~~~~~~~----------------------------  168 (343)
T 3lrv_A          120 IEVDSANEIIYMYGHNEVNTEYFIWADN---RGTIGFQSYEDDSQYIVHSAK----------------------------  168 (343)
T ss_dssp             EECCCSSCEEEEECCC---CCEEEEEET---TCCEEEEESSSSCEEEEECCC----------------------------
T ss_pred             eecCCCCCEEEEEcCCCCCCCEEEEEeC---CCcEEEEECCCCcEEEEEecC----------------------------
Confidence             225668999999999  9988777776   999999999877642211110                            


Q ss_pred             ccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEE
Q psy14511        153 IDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQL  232 (488)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~  232 (488)
                                                                                                      
T Consensus       169 --------------------------------------------------------------------------------  168 (343)
T 3lrv_A          169 --------------------------------------------------------------------------------  168 (343)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceee-eeecc-ccccEEEEEe--cCCEEEEeecCCeEEE
Q psy14511        233 LVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLI-QKLRT-HMHQVIAMCW--NGNLLSCGTIGGNILH  308 (488)
Q Consensus       233 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~-~~~~~-~~~~v~~~~~--~~~~l~~~~~dg~i~i  308 (488)
                             +...+.+++|+|++.+++++ +.||.|++||+++++.+ ..+.. |..+|.+++|  ++.+|++++ ++.|++
T Consensus       169 -------~~~~i~~~~~~pdg~~lasg-~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~i  239 (343)
T 3lrv_A          169 -------SDVEYSSGVLHKDSLLLALY-SPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVC  239 (343)
T ss_dssp             -------SSCCCCEEEECTTSCEEEEE-CTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEE
T ss_pred             -------CCCceEEEEECCCCCEEEEE-cCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEE
Confidence                   45568999999999999999 99999999999998877 77887 9999999999  688999999 559999


Q ss_pred             EECcCCCccceeee---cCCccEE--EEEEccCCcEEEEEe--cCeEEEEECCCCCCCcccc-eeeeeecC---CCCEEE
Q psy14511        309 YDVRTHSDYPTAIT---REGDVVC--GLKWSPNGRYLASGS--NNTVKIWDFRQLDAKRPLG-LIVPKLKR---EGRELV  377 (488)
Q Consensus       309 ~d~~~~~~~~~~~~---~~~~~i~--~~~~s~~~~~l~~~~--d~~i~iwd~~~~~~~~~~~-~~~~~~~~---~~~~l~  377 (488)
                      ||+++... ...+.   .|...+.  +++|+|+|++|++++  ++.+++|++.+....-... .....|++   +.+.++
T Consensus       240 wd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  318 (343)
T 3lrv_A          240 FDLRKDVG-TLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTKDEESALCLQSDTADFTDMD  318 (343)
T ss_dssp             EETTSSTT-CBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEEEEEEECCC----CCCCEEE
T ss_pred             EEcCCCCc-ceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceEecCceeEecCccccccceeE
Confidence            99998643 22222   2333343  699999999999966  6999999997653221111 11226666   666776


Q ss_pred             EEccCCCCeEEEEe
Q psy14511        378 TSHGKQDCSLKMWE  391 (488)
Q Consensus       378 ~~~g~~~~~i~i~d  391 (488)
                      +  ++.|+.+.++-
T Consensus       319 ~--~~~d~~~~~~~  330 (343)
T 3lrv_A          319 V--VCGDGGIAAIL  330 (343)
T ss_dssp             E--EEETTEEEEEE
T ss_pred             E--EecCCceEEEE
Confidence            6  45566666553

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=100.00  E-value=7.7e-30  Score=234.77  Aligned_cols=266  Identities=11%  Similarity=0.119  Sum_probs=207.0

Q ss_pred             cEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCc
Q psy14511         49 RYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQ  127 (488)
Q Consensus        49 ~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~  127 (488)
                      .++++++ |+.|++||+.+++.   +..+..| ..+.+++|+|++++++++++.  |+.|++||+.+++.+..+.     
T Consensus         3 ~l~vs~~~d~~v~v~d~~~~~~---~~~~~~~-~~~~~~~~s~dg~~l~~~~~~--d~~i~v~d~~~~~~~~~~~-----   71 (391)
T 1l0q_A            3 FAYIANSESDNISVIDVTSNKV---TATIPVG-SNPMGAVISPDGTKVYVANAH--SNDVSIIDTATNNVIATVP-----   71 (391)
T ss_dssp             EEEEEETTTTEEEEEETTTTEE---EEEEECS-SSEEEEEECTTSSEEEEEEGG--GTEEEEEETTTTEEEEEEE-----
T ss_pred             EEEEEcCCCCEEEEEECCCCeE---EEEeecC-CCcceEEECCCCCEEEEECCC--CCeEEEEECCCCeEEEEEE-----
Confidence            4567776 99999999987543   3334445 458999999999988777753  9999999998776432221     


Q ss_pred             cccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC
Q psy14511        128 ANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG  207 (488)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (488)
                                                                                                      
T Consensus        72 --------------------------------------------------------------------------------   71 (391)
T 1l0q_A           72 --------------------------------------------------------------------------------   71 (391)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccE
Q psy14511        208 YHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQV  287 (488)
Q Consensus       208 ~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v  287 (488)
                                                      ....+.+++|+|+++++++++..++.|++||+.+++.+..+..+ ..+
T Consensus        72 --------------------------------~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~  118 (391)
T 1l0q_A           72 --------------------------------AGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSP  118 (391)
T ss_dssp             --------------------------------CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSE
T ss_pred             --------------------------------CCCCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCc
Confidence                                            22378999999999998877577899999999999888877654 467


Q ss_pred             EEEEe--cCCEE-EEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEE-EEe-cCeEEEEECCCCCCCccc
Q psy14511        288 IAMCW--NGNLL-SCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLA-SGS-NNTVKIWDFRQLDAKRPL  362 (488)
Q Consensus       288 ~~~~~--~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~-d~~i~iwd~~~~~~~~~~  362 (488)
                      .+++|  +++.+ ++++.++.|++||+.+++ ....+..+. .+..++|+|++++|+ +++ ++.|++||+++.+....+
T Consensus       119 ~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~-~~~~~~~~~-~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~  196 (391)
T 1l0q_A          119 LGLALSPDGKKLYVTNNGDKTVSVINTVTKA-VINTVSVGR-SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTV  196 (391)
T ss_dssp             EEEEECTTSSEEEEEETTTTEEEEEETTTTE-EEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred             ceEEECCCCCEEEEEeCCCCEEEEEECCCCc-EEEEEecCC-CcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEE
Confidence            88888  57766 788889999999998753 445555544 468999999999885 445 499999999887544333


Q ss_pred             cee----eeeecCCCCEEEEEccC-CCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEE-EEEeCCCcEEEEecCC
Q psy14511        363 GLI----VPKLKREGRELVTSHGK-QDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCV-AAASADETISIWNCFP  436 (488)
Q Consensus       363 ~~~----~~~~~~~~~~l~~~~g~-~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~t~~~dg~v~iw~~~~  436 (488)
                      ...    ..+|+|++++++++... .++.|++||+.+++.+..+..|.. +.+++|+|++++| ++++.|+.|++||+.+
T Consensus       197 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~  275 (391)
T 1l0q_A          197 KVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPD-PAGIAVTPDGKKVYVALSFXNTVSVIDTAT  275 (391)
T ss_dssp             ECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSS-EEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred             ecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCC-ccEEEEccCCCEEEEEcCCCCEEEEEECCC
Confidence            211    22899999999985211 689999999999999888887654 7899999999987 6778899999999998


Q ss_pred             CCccc
Q psy14511        437 RDKKR  441 (488)
Q Consensus       437 ~~~~~  441 (488)
                      ++...
T Consensus       276 ~~~~~  280 (391)
T 1l0q_A          276 NTITA  280 (391)
T ss_dssp             TEEEE
T ss_pred             CcEEE
Confidence            87663

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=100.00  E-value=6e-30  Score=263.43  Aligned_cols=409  Identities=11%  Similarity=0.051  Sum_probs=276.0

Q ss_pred             cCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-C------CeEEEEeccccCcCCCccc
Q psy14511          3 WNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-N------NTVKIWDFRQLDAKRPQVN   75 (488)
Q Consensus         3 ~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d------~~i~vwd~~~~~~~~~~~~   75 (488)
                      |.|+.||..+. +.|.+|++..++  ...+.+|...+.+++|||||++||+++ +      ..|++||+.+++    ...
T Consensus        22 ~S~~~iaf~~~-~~l~~~~~~gg~--~~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~----~~~   94 (1045)
T 1k32_A           22 IHGDRIIFVCC-DDLWEHDLKSGS--TRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGE----IKR   94 (1045)
T ss_dssp             EETTEEEEEET-TEEEEEETTTCC--EEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTE----EEE
T ss_pred             EeCCEEEEEEC-CcEEEEECCCCc--EEEeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCC----eEE
Confidence            35778888764 789999998776  356788999999999999999999885 3      489999998754    233


Q ss_pred             ccccccce-------eEEEEecCCCeEEeeeCCc----ccceEEEEecCCCeeeeeeecCCCccccccccccccccceeE
Q psy14511         76 NQCHLSAV-------KAIAWCPWEPTLLATGGGI----CDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHL  144 (488)
Q Consensus        76 ~~~h~~~v-------~~l~~~~~~~~l~~~~~~~----~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (488)
                      +..|...+       ..++|+|||+ +++++...    ....|..|++.++.........   .....+++     . .+
T Consensus        95 lt~~~~~~~~~~~~~~~~~~SpDg~-ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~---~~~~~~sp-----G-~l  164 (1045)
T 1k32_A           95 ITYFSGKSTGRRMFTDVAGFDPDGN-LIISTDAMQPFSSMTCLYRVENDGINFVPLNLGP---ATHILFAD-----G-RR  164 (1045)
T ss_dssp             CCCCCEEEETTEECSEEEEECTTCC-EEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCS---CSEEEEET-----T-EE
T ss_pred             cccCCCcccccccccccccCCCCCE-EEEEECCcCCCcccceEEEEECCCCCeEEecCCC---cceeeeCC-----C-EE
Confidence            56688888       9999999998 55555420    1246888888777653322221   11222222     1 11


Q ss_pred             EEEEeeeec---------cccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEE-
Q psy14511        145 SFLLHGFEI---------DRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAV-  214 (488)
Q Consensus       145 ~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  214 (488)
                      .........         ....++.....                    .....+    ......+..+.|+++.++.. 
T Consensus       165 ~~~~~~~~~~~~~~~~g~~~~~lw~~~~~--------------------~~~~~l----~~~~~~v~~~~~s~d~l~~~~  220 (1045)
T 1k32_A          165 VIGRNTFELPHWKGYRGGTRGKIWIEVNS--------------------GAFKKI----VDMSTHVSSPVIVGHRIYFIT  220 (1045)
T ss_dssp             EEEESCSCCTTSTTCCSTTCCEEEEEEET--------------------TEEEEE----ECCSSCCEEEEEETTEEEEEE
T ss_pred             EEeccCCCccccccccCCCcCCEEEECCC--------------------CCeEEC----cCCCCcccceEEeCCEEEEEE
Confidence            111110000         00111110000                    000000    01112233456666655544 


Q ss_pred             ECCCeEEEEECCC-CceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecc-----------
Q psy14511        215 ALDTSVYTWNTKT-NKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRT-----------  282 (488)
Q Consensus       215 ~~d~~v~iw~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~-----------  282 (488)
                      ..++.+.+|.+.. +.....+..   +. .+...+|+|+|+.++++  .++.|.+|++... .+..+..           
T Consensus       221 ~~dg~~~l~~~~~~g~~~~~l~~---~~-~~~~~~~SpDG~~la~~--~~~~i~~~d~~~~-~l~~l~~~~~~~~~~~~~  293 (1045)
T 1k32_A          221 DIDGFGQIYSTDLDGKDLRKHTS---FT-DYYPRHLNTDGRRILFS--KGGSIYIFNPDTE-KIEKIEIGDLESPEDRII  293 (1045)
T ss_dssp             CTTSSCEEEEEETTSCSCEECCC---CC-SSCEEEEEESSSCEEEE--ETTEEEEECTTTC-CEEECCCCCCCBCCSEEE
T ss_pred             eccCceEEEEEeCCCCcceEecC---CC-CcceeeEcCCCCEEEEE--eCCEEEEecCCce-EeeeeccCcccccccccc
Confidence            4678888887643 222222221   22 45677999999999888  4899999998543 3334443           


Q ss_pred             ccccEEE--EE-ecCCEEEEeecCCeEEEEECcCCCccceeeecCCc-cEEEEEEccCCcEEEEEec-CeEE-EEECCCC
Q psy14511        283 HMHQVIA--MC-WNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGD-VVCGLKWSPNGRYLASGSN-NTVK-IWDFRQL  356 (488)
Q Consensus       283 ~~~~v~~--~~-~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-~i~~~~~s~~~~~l~~~~d-~~i~-iwd~~~~  356 (488)
                      |...+.+  ++ .+|+.+++++ ++.+++|++..+.  ...+..|.. .+..++|+ ||+.|+++++ +.+. +||+...
T Consensus       294 ~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~  369 (1045)
T 1k32_A          294 SIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTY--VLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTG  369 (1045)
T ss_dssp             ECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSB--EEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTC
T ss_pred             cccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCc--eEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCC
Confidence            2223444  45 5678888877 8899999998653  334556666 89999999 9999999885 7888 8998866


Q ss_pred             CCCcccc----eeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCC-----
Q psy14511        357 DAKRPLG----LIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADE-----  427 (488)
Q Consensus       357 ~~~~~~~----~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg-----  427 (488)
                      +......    ....+|+|||+++++  ++.++.|++||+.+++....+.+|...+.+++|||||++|++++.++     
T Consensus       370 ~~~~l~~~~~~~~~~~~SpDG~~la~--~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~  447 (1045)
T 1k32_A          370 KAEKFEENLGNVFAMGVDRNGKFAVV--ANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETD  447 (1045)
T ss_dssp             CEEECCCCCCSEEEEEECTTSSEEEE--EETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTC
T ss_pred             CceEecCCccceeeeEECCCCCEEEE--ECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCcccccc
Confidence            4322221    112399999999998  57789999999999998888878999999999999999999887654     


Q ss_pred             -----cEEEEecCCCCccccccccCCcceEEeecCCCceEEEE
Q psy14511        428 -----TISIWNCFPRDKKRKARQVGSGSSLEFAILKQPVSLTA  465 (488)
Q Consensus       428 -----~v~iw~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~  465 (488)
                           .|++||+.+++......+...+..++|+|||+.+....
T Consensus       448 ~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s  490 (1045)
T 1k32_A          448 GYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLS  490 (1045)
T ss_dssp             SCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEE
T ss_pred             CCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEEe
Confidence                 89999999988666667777788999999999876543

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=99.98  E-value=4.4e-30  Score=238.78  Aligned_cols=200  Identities=17%  Similarity=0.282  Sum_probs=160.5

Q ss_pred             CCCceEEEEEcCCCC-eEEEEeCCCCcEEEEECCccee-------eeeeccccccEEEEEe---cCCEEEEeecCCeEEE
Q psy14511        240 DNAYISCVAWKPRTT-DLAVTNTCTEYIDLWHEQEERL-------IQKLRTHMHQVIAMCW---NGNLLSCGTIGGNILH  308 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~-~l~~~~~~~~~i~i~d~~~~~~-------~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~i  308 (488)
                      |...+.+++|+|++. .|+++ +.||.|++|++..+..       ...+..|...|.+++|   ++.++++++.||.|++
T Consensus       180 h~~~v~~l~~~~~~~~~l~s~-~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i  258 (430)
T 2xyi_A          180 HQKEGYGLSWNPNLNGYLLSA-SDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMI  258 (430)
T ss_dssp             CSSCCCCEEECTTSTTEEEEE-CTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEE
T ss_pred             CCCCeEEEEeCCCCCCeEEEE-eCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEE
Confidence            788899999999998 78877 9999999999987322       4556789999999999   4689999999999999


Q ss_pred             EECcCCC--ccceeeecCCccEEEEEEccCCc-EEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCC
Q psy14511        309 YDVRTHS--DYPTAITREGDVVCGLKWSPNGR-YLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQD  384 (488)
Q Consensus       309 ~d~~~~~--~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~  384 (488)
                      ||+++..  .....+..|...|++++|+|+++ +|++++ |+.|++||+++.                            
T Consensus       259 ~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~----------------------------  310 (430)
T 2xyi_A          259 WDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL----------------------------  310 (430)
T ss_dssp             EETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCT----------------------------
T ss_pred             EECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCC----------------------------
Confidence            9999763  46667789999999999999987 677776 477777777643                            


Q ss_pred             CeEEEEeCCCcceeEEEeeccccEEEEEEcCCCC-EEEEEeCCCcEEEEecCCCC--------------cc-ccccccCC
Q psy14511        385 CSLKMWEYPRLHLIEELKIHQERILSAVLSPDQT-CVAAASADETISIWNCFPRD--------------KK-RKARQVGS  448 (488)
Q Consensus       385 ~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~t~~~dg~v~iw~~~~~~--------------~~-~~~~~~~~  448 (488)
                                .+++..+.+|...|++++|+|+++ +|++++.||.|++||+....              .. ....|...
T Consensus       311 ----------~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~  380 (430)
T 2xyi_A          311 ----------KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAK  380 (430)
T ss_dssp             ----------TSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSC
T ss_pred             ----------CCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCC
Confidence                      235667788999999999999985 69999999999999998722              22 34567888


Q ss_pred             cceEEeecCCCceEEEEeeecccccceeeEEEEeec
Q psy14511        449 GSSLEFAILKQPVSLTALLRSRAVEKQQHAIAYTVF  484 (488)
Q Consensus       449 v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  484 (488)
                      +.+++|+|++..+.      +.+..+..+.||....
T Consensus       381 v~~~~~~p~~~~~l------~s~s~dg~i~iw~~~~  410 (430)
T 2xyi_A          381 ISDFSWNPNEPWII------CSVSEDNIMQVWQMAE  410 (430)
T ss_dssp             EEEEEECSSSTTEE------EEEETTSEEEEEEECH
T ss_pred             ceEEEECCCCCCEE------EEEECCCCEEEeEccc
Confidence            99999999988442      2344666677776543

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.98  E-value=2.7e-29  Score=234.42  Aligned_cols=232  Identities=9%  Similarity=0.055  Sum_probs=186.3

Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEE-EeecCCeEEEEECcCCCc
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLS-CGTIGGNILHYDVRTHSD  316 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~-~~~~dg~i~i~d~~~~~~  316 (488)
                      |...+.+++|+|+++.++++ +.++.|++||+++++.+..+..|...+.+++|  +++.++ +++.++.|++||+++++ 
T Consensus       168 ~~~~v~~~~~~~~~~~~~s~-~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~-  245 (433)
T 3bws_A          168 KLGFVETISIPEHNELWVSQ-MQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKL-  245 (433)
T ss_dssp             TCCEEEEEEEGGGTEEEEEE-GGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTE-
T ss_pred             cCCceeEEEEcCCCEEEEEE-CCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCc-
Confidence            77789999999999888888 89999999999999999999889999999999  567664 55589999999998753 


Q ss_pred             cceeeecCCccEEEEEEccCCcEEEEEe---------cCeEEEEECCCCCCCccccee----eeeecCCCCEEEEEccCC
Q psy14511        317 YPTAITREGDVVCGLKWSPNGRYLASGS---------NNTVKIWDFRQLDAKRPLGLI----VPKLKREGRELVTSHGKQ  383 (488)
Q Consensus       317 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~---------d~~i~iwd~~~~~~~~~~~~~----~~~~~~~~~~l~~~~g~~  383 (488)
                      ....+.. ...+.+++|+|+++++++++         |+.|++||+.+++....+...    ..+|+|+++.++++ +..
T Consensus       246 ~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~-~~~  323 (433)
T 3bws_A          246 EIRKTDK-IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVS-DMC  323 (433)
T ss_dssp             EEEECCC-CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEE-ETT
T ss_pred             EEEEecC-CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEE-ecC
Confidence            4444444 34589999999999998887         469999999987544333111    22899999877664 678


Q ss_pred             CCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeC---------------CCcEEEEecCCCCccccccccCC
Q psy14511        384 DCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASA---------------DETISIWNCFPRDKKRKARQVGS  448 (488)
Q Consensus       384 ~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~---------------dg~v~iw~~~~~~~~~~~~~~~~  448 (488)
                      ++.|++||+.+++.+..+. +...+.+++|+|++++|++++.               ||.|++||+.+++..........
T Consensus       324 ~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~  402 (433)
T 3bws_A          324 CSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQ  402 (433)
T ss_dssp             TTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSS
T ss_pred             CCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCCC
Confidence            9999999999998888776 6778999999999999988876               57999999999988766666778


Q ss_pred             cceEEeecCCCceEEEEeeecccccceeeEEEEe
Q psy14511        449 GSSLEFAILKQPVSLTALLRSRAVEKQQHAIAYT  482 (488)
Q Consensus       449 v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~  482 (488)
                      +.+++|+|+++.+....      ..+..+.++..
T Consensus       403 ~~~~~~s~dg~~l~~~~------~~d~~i~v~~~  430 (433)
T 3bws_A          403 PTGLDVSPDNRYLVISD------FLDHQIRVYRR  430 (433)
T ss_dssp             EEEEEECTTSCEEEEEE------TTTTEEEEEEE
T ss_pred             CceEEEcCCCCEEEEEE------CCCCeEEEEEe
Confidence            99999999998874322      23455555543

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=99.97  E-value=1.7e-29  Score=236.51  Aligned_cols=237  Identities=10%  Similarity=0.030  Sum_probs=177.1

Q ss_pred             ccCceEEEEEEccCCcEE-EEec-CCeEEEEecc--ccCcCCCccccc--ccccceeEEEEecCCCeEEeeeCCcccceE
Q psy14511         34 REGDVVCGLKWSPNGRYL-ASGS-NNTVKIWDFR--QLDAKRPQVNNQ--CHLSAVKAIAWCPWEPTLLATGGGICDQTV  107 (488)
Q Consensus        34 ~h~~~V~~l~~sp~g~~l-as~~-d~~i~vwd~~--~~~~~~~~~~~~--~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i  107 (488)
                      +|.+.|.+++|+|++++| ++++ |+.|+|||+.  +++.   +..+.  .|...|.+++|+|++++|++++.   ++.+
T Consensus       100 ~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~---~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~---~g~v  173 (450)
T 2vdu_B          100 PIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNV---LKLRKRFCFSKRPNAISIAEDDTTVIIADK---FGDV  173 (450)
T ss_dssp             CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSC---EEEEEEEECSSCEEEEEECTTSSEEEEEET---TSEE
T ss_pred             ccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCce---eeeeecccCCCCceEEEEcCCCCEEEEEeC---CCcE
Confidence            345579999999999996 8887 9999999998  5433   33333  56789999999999998887776   9999


Q ss_pred             EEEecCCCeeee----eeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeeccccccccccc
Q psy14511        108 RLWNSMNGKEKC----HVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVK  183 (488)
Q Consensus       108 ~vwd~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (488)
                      ++|++.++....    .+..+...                                                        
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~h~~~--------------------------------------------------------  197 (450)
T 2vdu_B          174 YSIDINSIPEEKFTQEPILGHVSM--------------------------------------------------------  197 (450)
T ss_dssp             EEEETTSCCCSSCCCCCSEECSSC--------------------------------------------------------
T ss_pred             EEEecCCcccccccceeeecccCc--------------------------------------------------------
Confidence            999998776432    22222211                                                        


Q ss_pred             CCCceeecCCCccccceeeeeeeCC-----CcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEE
Q psy14511        184 AKPERILEAPSIINDFYTSGLDWGY-----HDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAV  258 (488)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~  258 (488)
                                       +.++.|++     ..+++++.|+.|++||+.+++....+. .+ |...|.+++|+ ++++|++
T Consensus       198 -----------------v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~-~~-h~~~v~~~~~s-d~~~l~s  257 (450)
T 2vdu_B          198 -----------------LTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWL-FG-HKHFVSSICCG-KDYLLLS  257 (450)
T ss_dssp             -----------------EEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEEC-CC-CSSCEEEEEEC-STTEEEE
T ss_pred             -----------------eEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeee-cC-CCCceEEEEEC-CCCEEEE
Confidence                             22233333     257788899999999999888665532 23 88999999999 9999999


Q ss_pred             EeCCCCcEEEEECCcceeeeeecc-------------------------ccccEEEEEe--cCCEEEEee-cCCeEEEEE
Q psy14511        259 TNTCTEYIDLWHEQEERLIQKLRT-------------------------HMHQVIAMCW--NGNLLSCGT-IGGNILHYD  310 (488)
Q Consensus       259 ~~~~~~~i~i~d~~~~~~~~~~~~-------------------------~~~~v~~~~~--~~~~l~~~~-~dg~i~i~d  310 (488)
                      + +.|+.|++||+.+++.+..+..                         ....+.++.+  +++++++++ .++.|++|+
T Consensus       258 ~-~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~  336 (450)
T 2vdu_B          258 A-GGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILE  336 (450)
T ss_dssp             E-ESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEE
T ss_pred             E-eCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEE
Confidence            9 8999999999999988877753                         2346888888  688999988 899999999


Q ss_pred             C--cCCC--ccceeeecCCccEEEEEEccCCcEEEEEec-------CeEEEEECC
Q psy14511        311 V--RTHS--DYPTAITREGDVVCGLKWSPNGRYLASGSN-------NTVKIWDFR  354 (488)
Q Consensus       311 ~--~~~~--~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d-------~~i~iwd~~  354 (488)
                      +  ....  .....+..+ ..|.+++|+|++.++++++.       ..|.+|.+.
T Consensus       337 ~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~  390 (450)
T 2vdu_B          337 MSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYN  390 (450)
T ss_dssp             ECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEE
T ss_pred             eccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEE
Confidence            9  4321  345556666 78999999996544444331       236777654

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.97  E-value=2.8e-29  Score=231.35  Aligned_cols=294  Identities=13%  Similarity=0.101  Sum_probs=218.8

Q ss_pred             CceEEEee----cCC----eEEEEEc--ccCccc-ceeecccCceEEEEEEcc--------------CCcEEEEec-C--
Q psy14511          5 GNLLSCGT----IGG----NILHYDV--RTHSDY-PTAITREGDVVCGLKWSP--------------NGRYLASGS-N--   56 (488)
Q Consensus         5 g~~la~g~----~dg----~i~iwd~--~~~~~~-~~~~~~h~~~V~~l~~sp--------------~g~~las~~-d--   56 (488)
                      -+++++|+    .+|    .|+|||+  .+++.+ ...+.+|...+..+++++              .+..|+.++ +  
T Consensus        75 ~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~  154 (415)
T 2hqs_A           75 IDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNG  154 (415)
T ss_dssp             CCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSS
T ss_pred             CCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCC
Confidence            35677776    467    9999999  887754 245788988888888876              155666554 3  


Q ss_pred             ----CeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCcccccc
Q psy14511         57 ----NTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDET  132 (488)
Q Consensus        57 ----~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~  132 (488)
                          +.|++||++..    ....+.+|...+.+++|+|||+++++++....+..|++||+.+++..              
T Consensus       155 ~~~~~~i~i~d~~g~----~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~--------------  216 (415)
T 2hqs_A          155 GQFPYELRVSDYDGY----NQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR--------------  216 (415)
T ss_dssp             SSCCEEEEEEETTSC----SCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE--------------
T ss_pred             CCccceEEEEcCCCC----CCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE--------------
Confidence                79999999742    23446678999999999999998888876211248888888766531              


Q ss_pred             ccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEE
Q psy14511        133 ISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTL  212 (488)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (488)
                                                                                                      
T Consensus       217 --------------------------------------------------------------------------------  216 (415)
T 2hqs_A          217 --------------------------------------------------------------------------------  216 (415)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCc--EEEEECCcceeeeeeccccccEEEE
Q psy14511        213 AVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEY--IDLWHEQEERLIQKLRTHMHQVIAM  290 (488)
Q Consensus       213 ~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~--i~i~d~~~~~~~~~~~~~~~~v~~~  290 (488)
                                         ....    +...+.+++|+|+|+.|+.+++.++.  |++||+.+++. ..+..|...+.++
T Consensus       217 -------------------~l~~----~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~  272 (415)
T 2hqs_A          217 -------------------QVAS----FPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEP  272 (415)
T ss_dssp             -------------------EEEC----CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEE
T ss_pred             -------------------Eeec----CCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccce
Confidence                               1111    45578899999999988855366654  99999988765 5677788889999


Q ss_pred             Ee--cCCEEEEeec-CC--eEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCccccee
Q psy14511        291 CW--NGNLLSCGTI-GG--NILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLI  365 (488)
Q Consensus       291 ~~--~~~~l~~~~~-dg--~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~  365 (488)
                      +|  +++.|++++. ++  .|++||+.++.  ...+..+...+.+++|+|+|++|++++..                   
T Consensus       273 ~~spdg~~l~~~s~~~g~~~i~~~d~~~~~--~~~l~~~~~~~~~~~~spdG~~l~~~~~~-------------------  331 (415)
T 2hqs_A          273 TWFPDSQNLAFTSDQAGRPQVYKVNINGGA--PQRITWEGSQNQDADVSSDGKFMVMVSSN-------------------  331 (415)
T ss_dssp             EECTTSSEEEEEECTTSSCEEEEEETTSSC--CEECCCSSSEEEEEEECTTSSEEEEEEEC-------------------
T ss_pred             EECCCCCEEEEEECCCCCcEEEEEECCCCC--EEEEecCCCcccCeEECCCCCEEEEEECc-------------------
Confidence            99  7888888776 44  68888987753  34455667788999999999999887620                   


Q ss_pred             eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCC---cEEEEecCCCCcccc
Q psy14511        366 VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADE---TISIWNCFPRDKKRK  442 (488)
Q Consensus       366 ~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg---~v~iw~~~~~~~~~~  442 (488)
                                      ..+..|++||+.+++. ..+..|. .+.+++|+|||++|++++.|+   .|++||+..+....+
T Consensus       332 ----------------~g~~~i~~~d~~~~~~-~~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l  393 (415)
T 2hqs_A          332 ----------------GGQQHIAKQDLATGGV-QVLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARL  393 (415)
T ss_dssp             ----------------SSCEEEEEEETTTCCE-EECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEEC
T ss_pred             ----------------CCceEEEEEECCCCCE-EEecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEe
Confidence                            0123455566555554 3444454 789999999999999998877   799999998777778


Q ss_pred             ccccCCcceEEeecCCC
Q psy14511        443 ARQVGSGSSLEFAILKQ  459 (488)
Q Consensus       443 ~~~~~~v~~~~~s~~~~  459 (488)
                      ..+.+.+.+++|+|...
T Consensus       394 ~~~~~~v~~~~~~~~~~  410 (415)
T 2hqs_A          394 PATDGQVKFPAWSPYLH  410 (415)
T ss_dssp             CCSSSEEEEEEECCCCC
T ss_pred             eCCCCCCcCCccccccc
Confidence            88899999999999544

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.97  E-value=3.5e-29  Score=237.47  Aligned_cols=318  Identities=9%  Similarity=0.040  Sum_probs=238.8

Q ss_pred             EEccCCcEEEEec-CCeEEEEeccccCcCCCccccc-ccccceeEEEEecCCCeEEeeeCCcccceEEEEec--CCCeee
Q psy14511         43 KWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQ-CHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNS--MNGKEK  118 (488)
Q Consensus        43 ~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~-~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~--~~~~~~  118 (488)
                      +|+|+++++++++ |++|.+||..+++..   ..+. ++.  +..++|+||++++++++.   |++|.+||+  .+++.+
T Consensus       144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~---~~i~~g~~--~~~v~~spdg~~l~v~~~---d~~V~v~D~~~~t~~~~  215 (543)
T 1nir_A          144 DLDLPNLFSVTLRDAGQIALVDGDSKKIV---KVIDTGYA--VHISRMSASGRYLLVIGR---DARIDMIDLWAKEPTKV  215 (543)
T ss_dssp             CCCGGGEEEEEEGGGTEEEEEETTTCCEE---EEEECSTT--EEEEEECTTSCEEEEEET---TSEEEEEETTSSSCEEE
T ss_pred             ccCCCCEEEEEEcCCCeEEEEECCCceEE---EEEecCcc--cceEEECCCCCEEEEECC---CCeEEEEECcCCCCcEE
Confidence            4899999998887 999999999885543   3334 333  889999999999888887   899999999  555432


Q ss_pred             eeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCcccc
Q psy14511        119 CHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIIND  198 (488)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (488)
                      ..+                                                                             
T Consensus       216 ~~i-----------------------------------------------------------------------------  218 (543)
T 1nir_A          216 AEI-----------------------------------------------------------------------------  218 (543)
T ss_dssp             EEE-----------------------------------------------------------------------------
T ss_pred             EEE-----------------------------------------------------------------------------
Confidence            221                                                                             


Q ss_pred             ceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcC----CCCeEEEEeCCCCcEEEEECCcc
Q psy14511        199 FYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKP----RTTDLAVTNTCTEYIDLWHEQEE  274 (488)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~l~~~~~~~~~i~i~d~~~~  274 (488)
                                                          .    ....+..++|+|    +|+++++++..+++|.+||..++
T Consensus       219 ------------------------------------~----~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~  258 (543)
T 1nir_A          219 ------------------------------------K----IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETL  258 (543)
T ss_dssp             ------------------------------------E----CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTC
T ss_pred             ------------------------------------e----cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecccc
Confidence                                                1    233578899999    99999999556899999999999


Q ss_pred             eeeeeeccc----------c-ccEEEEEe--c-CCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEE
Q psy14511        275 RLIQKLRTH----------M-HQVIAMCW--N-GNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYL  340 (488)
Q Consensus       275 ~~~~~~~~~----------~-~~v~~~~~--~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l  340 (488)
                      +++..+..+          . ..+.++.+  + +.++++...++.|.+||+.+.+........+...+..++|+|+|+++
T Consensus       259 ~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l  338 (543)
T 1nir_A          259 EPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYF  338 (543)
T ss_dssp             CEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEE
T ss_pred             ccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEE
Confidence            888877642          2 26778877  3 45677788899999999987653332233455667889999999987


Q ss_pred             EEEe--cCeEEEEECCCCCCCcccce----e----eeeecCCCCEEEEEccCCCCeEEEEeCCC-------cceeEEEee
Q psy14511        341 ASGS--NNTVKIWDFRQLDAKRPLGL----I----VPKLKREGRELVTSHGKQDCSLKMWEYPR-------LHLIEELKI  403 (488)
Q Consensus       341 ~~~~--d~~i~iwd~~~~~~~~~~~~----~----~~~~~~~~~~l~~~~g~~~~~i~i~d~~~-------~~~~~~~~~  403 (488)
                      ++++  +++|.+||..+++....+..    .    ...++|++..++++....+++|.+||+.+       +++++++.+
T Consensus       339 ~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~  418 (543)
T 1nir_A          339 MTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQG  418 (543)
T ss_dssp             EEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEEC
T ss_pred             EEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEc
Confidence            7665  49999999998865544432    1    11346775555443234689999999988       899999999


Q ss_pred             ccccEEEEEEcCCCCEEEEEe-------CCCcEEEEecCCCCcc-cc---------ccccCCcceEEeecCCCceEEEEe
Q psy14511        404 HQERILSAVLSPDQTCVAAAS-------ADETISIWNCFPRDKK-RK---------ARQVGSGSSLEFAILKQPVSLTAL  466 (488)
Q Consensus       404 ~~~~v~~~~~s~~~~~l~t~~-------~dg~v~iw~~~~~~~~-~~---------~~~~~~v~~~~~s~~~~~~~~~~~  466 (488)
                      |...+..++++||+++|++++       .+++|.+||+.+++.. ..         ..+...+..++|+|+|+.+.+...
T Consensus       419 ~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~  498 (543)
T 1nir_A          419 QGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVW  498 (543)
T ss_dssp             SCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEE
T ss_pred             CCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEee
Confidence            988899999999999999987       2789999999998866 22         234667899999999999865432


Q ss_pred             eecccccceeeEEEEeecccc
Q psy14511        467 LRSRAVEKQQHAIAYTVFGEA  487 (488)
Q Consensus       467 ~~~~~~~~~~~~i~~~~~g~~  487 (488)
                        ....++..+.|+..++|+.
T Consensus       499 --~~~~~~~~i~v~D~~t~~~  517 (543)
T 1nir_A          499 --NGKNDSSALVVVDDKTLKL  517 (543)
T ss_dssp             --CCTTSCCEEEEEETTTTEE
T ss_pred             --cCCCCCCeEEEEECCCceE
Confidence              1123455666777776653

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=99.97  E-value=1.4e-30  Score=258.53  Aligned_cols=252  Identities=15%  Similarity=0.242  Sum_probs=198.7

Q ss_pred             cccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCC--CeeeeeeecCCCccccccccccccccceeEEEEEeeee
Q psy14511         75 NNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMN--GKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFE  152 (488)
Q Consensus        75 ~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (488)
                      .+.+|.++|++++|+|+++++++++.   ||.|++||+.+  ++....+..+...+                        
T Consensus         4 ~l~gH~~~V~~l~~s~dg~~latg~~---dg~I~vwd~~~~~~~~~~~l~~h~~~V------------------------   56 (753)
T 3jro_A            4 IANAHNELIHDAVLDYYGKRLATCSS---DKTIKIFEVEGETHKLIDTLTGHEGPV------------------------   56 (753)
T ss_dssp             ----CCCCEEEECCCSSSCCEEEEET---TTEEEEEEEETTEEEEEEEECCCSSCE------------------------
T ss_pred             ecccCcceeEEEEECCCCCeEEEEEC---CCcEEEEecCCCCCccceeccCCcCce------------------------
Confidence            46789999999999999998887776   99999999974  34444444443322                        


Q ss_pred             ccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC----CCcEEEEECCCeEEEEECCCC
Q psy14511        153 IDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG----YHDTLAVALDTSVYTWNTKTN  228 (488)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~d~~v~iw~~~~~  228 (488)
                                                                       .++.|+    ++.+++++.||.|++||+.++
T Consensus        57 -------------------------------------------------~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~   87 (753)
T 3jro_A           57 -------------------------------------------------WRVDWAHPKFGTILASCSYDGKVLIWKEENG   87 (753)
T ss_dssp             -------------------------------------------------EEEEECCTTSCSEEEEEETTSCEEEEEEETT
T ss_pred             -------------------------------------------------EEEEecCCCCCCEEEEEeCCCeEEEEECCCC
Confidence                                                             223332    346788889999999999998


Q ss_pred             ceEEEEecCCCCCCceEEEEEcCC--CCeEEEEeCCCCcEEEEECCcc--eeeeeeccccccEEEEEec-----------
Q psy14511        229 KTQLLVEYPTYDNAYISCVAWKPR--TTDLAVTNTCTEYIDLWHEQEE--RLIQKLRTHMHQVIAMCWN-----------  293 (488)
Q Consensus       229 ~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~~~~~i~i~d~~~~--~~~~~~~~~~~~v~~~~~~-----------  293 (488)
                      +........+ |...|++++|+|+  ++.++++ +.||.|++||++.+  .....+.+|...|.++.|.           
T Consensus        88 ~~~~~~~~~~-h~~~V~~v~~sp~~~~~~l~sg-s~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~  165 (753)
T 3jro_A           88 RWSQIAVHAV-HSASVNSVQWAPHEYGPLLLVA-SSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHN  165 (753)
T ss_dssp             EEEEEEEECC-CSSCEEEEEECCGGGCSEEEEE-ETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC--------
T ss_pred             cccccccccC-CCCCeEEEEECCCCCCCEEEEE-eCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccc
Confidence            7555555555 8999999999999  8999999 99999999999876  3445567899999999993           


Q ss_pred             ----CCEEEEeecCCeEEEEECcCCC---ccceeeecCCccEEEEEEccC---CcEEEEEe-cCeEEEEECCCCCCCccc
Q psy14511        294 ----GNLLSCGTIGGNILHYDVRTHS---DYPTAITREGDVVCGLKWSPN---GRYLASGS-NNTVKIWDFRQLDAKRPL  362 (488)
Q Consensus       294 ----~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~~i~~~~~s~~---~~~l~~~~-d~~i~iwd~~~~~~~~~~  362 (488)
                          ++.+++|+.||.|++||++++.   .....+..|..+|.+++|+|+   +++|++++ ||.|++||+.+.+...  
T Consensus       166 ~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~--  243 (753)
T 3jro_A          166 GTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPW--  243 (753)
T ss_dssp             -CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCC--
T ss_pred             cCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcc--
Confidence                6799999999999999998764   344567789999999999999   89999998 6999999987652100  


Q ss_pred             ceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCC
Q psy14511        363 GLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRD  438 (488)
Q Consensus       363 ~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~  438 (488)
                                                      ...+.....|...|++++|+|++++|++++.||.|++|++.++.
T Consensus       244 --------------------------------~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~  287 (753)
T 3jro_A          244 --------------------------------KKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG  287 (753)
T ss_dssp             --------------------------------BCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSSS
T ss_pred             --------------------------------eeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCC
Confidence                                            01122234578889999999999999999999999999998543

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.97  E-value=1.8e-28  Score=252.54  Aligned_cols=218  Identities=11%  Similarity=0.059  Sum_probs=164.9

Q ss_pred             cEEEEECCCeEEEEECCCCceEEEEecCC--------CCCCceEEEEEc-CCCCeEEEEeCCCCcEEEEECCcceeeeee
Q psy14511        210 DTLAVALDTSVYTWNTKTNKTQLLVEYPT--------YDNAYISCVAWK-PRTTDLAVTNTCTEYIDLWHEQEERLIQKL  280 (488)
Q Consensus       210 ~~~~~~~d~~v~iw~~~~~~~~~~~~~~~--------~~~~~i~~~~~~-~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~  280 (488)
                      +.++.+.++.|++|++...... .+....        .+...+.+++|+ |+|+.++++ + ++.+.+|+...++.. .+
T Consensus       257 ~~la~~~~~~i~~~d~~~~~l~-~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~-~-~~~i~~~~~~~~~~~-~~  332 (1045)
T 1k32_A          257 RRILFSKGGSIYIFNPDTEKIE-KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFV-S-RGQAFIQDVSGTYVL-KV  332 (1045)
T ss_dssp             SCEEEEETTEEEEECTTTCCEE-ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEE-E-TTEEEEECTTSSBEE-EC
T ss_pred             CEEEEEeCCEEEEecCCceEee-eeccCcccccccccccccccceeeecCCCCCEEEEE-E-cCEEEEEcCCCCceE-Ec
Confidence            3344456999999999554433 222100        022368899999 999999998 4 889999999876544 35


Q ss_pred             ccccc-cEEEEEe-cCCEEEEeecCCeEE-EEECcCCCccceeeecCCccEEEEEEccCCcEEEEEec-CeEEEEECCCC
Q psy14511        281 RTHMH-QVIAMCW-NGNLLSCGTIGGNIL-HYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN-NTVKIWDFRQL  356 (488)
Q Consensus       281 ~~~~~-~v~~~~~-~~~~l~~~~~dg~i~-i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d-~~i~iwd~~~~  356 (488)
                      ..|.. .+..++| +++.++.++.++.+. +||+..+.  ...+..|...+..++|+|||++|+++++ +.+++||+.++
T Consensus       333 ~~~~~~~~~~~~~sdg~~l~~~s~~~~l~~~~d~~~~~--~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg  410 (1045)
T 1k32_A          333 PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGK--AEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETG  410 (1045)
T ss_dssp             SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCC--EEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred             cCCCcceEEeeeEcCCCeEEEEECCCceEEEEECCCCC--ceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCC
Confidence            56666 7888888 677888888888888 99988653  2334477788999999999999999984 99999999987


Q ss_pred             CCCcccce-----eeeeecCCCCEEEEEccC--------CCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEE
Q psy14511        357 DAKRPLGL-----IVPKLKREGRELVTSHGK--------QDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAA  423 (488)
Q Consensus       357 ~~~~~~~~-----~~~~~~~~~~~l~~~~g~--------~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~  423 (488)
                      +.......     ...+|+|||++++++...        .++.|++||+.+++ +..+..|...+..++|+|||++|+++
T Consensus       411 ~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~  489 (1045)
T 1k32_A          411 KPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYL  489 (1045)
T ss_dssp             CEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEE
T ss_pred             ceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEE
Confidence            65433311     123899999999885321        23589999999887 67788888889999999999999999


Q ss_pred             eCCCcEEEEec
Q psy14511        424 SADETISIWNC  434 (488)
Q Consensus       424 ~~dg~v~iw~~  434 (488)
                      +.++...+|+.
T Consensus       490 s~~~~~~~~~~  500 (1045)
T 1k32_A          490 SYRSLDPSPDR  500 (1045)
T ss_dssp             ESCCCCCEECS
T ss_pred             ecccCCcCcch
Confidence            98877777764

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.97  E-value=1.7e-28  Score=210.60  Aligned_cols=277  Identities=12%  Similarity=0.070  Sum_probs=204.3

Q ss_pred             eEEEEEEccCCc---EEEEecCCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCC
Q psy14511         38 VVCGLKWSPNGR---YLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMN  114 (488)
Q Consensus        38 ~V~~l~~sp~g~---~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~  114 (488)
                      .+.++-|-..|-   -+++++...|++|+..++...+.+.++..|+.+|..+.|.||...|+...-+    .     +  
T Consensus        41 ~~~~~~~~~~~~~~~~~~~~~~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~----~-----~--  109 (356)
T 2w18_A           41 DVSAMFWERAGCKEPCIITACEDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALG----N-----L--  109 (356)
T ss_dssp             EEEEEEEC----CEEEEEEEESSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEEC----S-----S--
T ss_pred             EEeeeeeccCCCCccEEEEeccceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeec----c-----c--
Confidence            466676755443   5777789999999999875567888899999999999999998777665531    0     0  


Q ss_pred             CeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCC
Q psy14511        115 GKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPS  194 (488)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (488)
                                                                                                      
T Consensus       110 --------------------------------------------------------------------------------  109 (356)
T 2w18_A          110 --------------------------------------------------------------------------------  109 (356)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCC----CCeEEEEeCCCCcEEEEE
Q psy14511        195 IINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPR----TTDLAVTNTCTEYIDLWH  270 (488)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~l~~~~~~~~~i~i~d  270 (488)
                                                                   +...|..++++|+    ++.++.+ +  ..+.+|+
T Consensus       110 ---------------------------------------------~~~~v~sla~spd~~~~~~~l~s~-g--~~~~v~~  141 (356)
T 2w18_A          110 ---------------------------------------------EIREIRALFCSSDDESEKQVLLKS-G--NIKAVLG  141 (356)
T ss_dssp             ---------------------------------------------SEEEEEEECC------CCEEEEEE-E--EEEEEEE
T ss_pred             ---------------------------------------------cccceEEEEECCCccccccEEEeC-C--CeEEEEe
Confidence                                                         3446889999999    8888887 4  3377776


Q ss_pred             CCcceeeeeeccccccEEEEEecCCEEEEee--cCCeEEEEECcCCCccceeeecCCccEEEEEEcc---CCcEEEEEe-
Q psy14511        271 EQEERLIQKLRTHMHQVIAMCWNGNLLSCGT--IGGNILHYDVRTHSDYPTAITREGDVVCGLKWSP---NGRYLASGS-  344 (488)
Q Consensus       271 ~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~---~~~~l~~~~-  344 (488)
                      +.++                    +++.++.  .|+.|++|++....+....+..|...+..++|+|   ++.+|++++ 
T Consensus       142 l~~g--------------------~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~  201 (356)
T 2w18_A          142 LTKR--------------------RLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTI  201 (356)
T ss_dssp             ETTT--------------------EEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEET
T ss_pred             cCCC--------------------cEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecC
Confidence            5433                    3333322  5889999999665566777888998899999999   779999999 


Q ss_pred             cCeEEEEECCCCCCCccccee------e--eeecCCCCEEEE----------EccCCCCeEEEEeCCCcceeEEE-----
Q psy14511        345 NNTVKIWDFRQLDAKRPLGLI------V--PKLKREGRELVT----------SHGKQDCSLKMWEYPRLHLIEEL-----  401 (488)
Q Consensus       345 d~~i~iwd~~~~~~~~~~~~~------~--~~~~~~~~~l~~----------~~g~~~~~i~i~d~~~~~~~~~~-----  401 (488)
                      |++|+|||+++++..+.+...      +  .+|+|+|+++++          ++|+.|++|++||..+++.+..+     
T Consensus       202 D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p  281 (356)
T 2w18_A          202 MNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLP  281 (356)
T ss_dssp             TSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCC
T ss_pred             CCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeecc
Confidence            699999999998765555321      1  179999998864          44889999999999999887765     


Q ss_pred             eeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcccc-ccccCCcc-eEEeecCCCceEEEEeeecccccceeeEE
Q psy14511        402 KIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRK-ARQVGSGS-SLEFAILKQPVSLTALLRSRAVEKQQHAI  479 (488)
Q Consensus       402 ~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~-~~~~~~v~-~~~~s~~~~~~~~~~~~~~~~~~~~~~~i  479 (488)
                      .+|...+.+..+  ++.++|+++.|++|+|||+.+++.... .+|...+. +++|+||++.+       +.++.|..+.|
T Consensus       282 ~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~L-------aSGS~D~TIkl  352 (356)
T 2w18_A          282 PGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHL-------LAGQKDGNIFV  352 (356)
T ss_dssp             TTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEE-------EEECTTSCEEE
T ss_pred             CCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEE-------EEEECCCcEEE
Confidence            366666555544  488999999999999999999998754 45666554 58999999887       45678888888


Q ss_pred             EEe
Q psy14511        480 AYT  482 (488)
Q Consensus       480 ~~~  482 (488)
                      |..
T Consensus       353 Wd~  355 (356)
T 2w18_A          353 YHY  355 (356)
T ss_dssp             EEE
T ss_pred             ecC
Confidence            753

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.97  E-value=2.8e-28  Score=242.71  Aligned_cols=346  Identities=11%  Similarity=0.073  Sum_probs=231.0

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccceeecccCc---eEEEEEEccCCcEEEEec-C---------CeEEEEeccccCcC
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGD---VVCGLKWSPNGRYLASGS-N---------NTVKIWDFRQLDAK   70 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~---~V~~l~~sp~g~~las~~-d---------~~i~vwd~~~~~~~   70 (488)
                      ||+++++ +.||+|++||+.+++.. ..+.+|..   .|.+++|||||++||+++ +         +.|.+||+.+++. 
T Consensus        27 dg~~~~~-~~dg~i~~~d~~~g~~~-~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-  103 (723)
T 1xfd_A           27 DTEFIYR-EQKGTVRLWNVETNTST-VLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-  103 (723)
T ss_dssp             SSCBCCC-CSSSCEEEBCGGGCCCE-EEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-
T ss_pred             CCcEEEE-eCCCCEEEEECCCCcEE-EEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-
Confidence            8998876 67999999999998743 55666654   499999999999999986 3         7899999988654 


Q ss_pred             CCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEee
Q psy14511         71 RPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHG  150 (488)
Q Consensus        71 ~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (488)
                      +.+....+|...+..++|+|||+.|+++.    ++.|++||+.+++.......+...                       
T Consensus       104 ~~l~~~~~~~~~~~~~~~SPdG~~la~~~----~~~i~~~~~~~g~~~~~~~~~~~~-----------------------  156 (723)
T 1xfd_A          104 QSLDPPEVSNAKLQYAGWGPKGQQLIFIF----ENNIYYCAHVGKQAIRVVSTGKEG-----------------------  156 (723)
T ss_dssp             EECCCTTCCSCCCSBCCBCSSTTCEEEEE----TTEEEEESSSSSCCEEEECCCBTT-----------------------
T ss_pred             EeccCCccccccccccEECCCCCEEEEEE----CCeEEEEECCCCceEEEecCCCCC-----------------------
Confidence            33333445666799999999999877765    679999999887654332211000                       


Q ss_pred             eeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCce
Q psy14511        151 FEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKT  230 (488)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~  230 (488)
                                                                                 .++.+..+     |       
T Consensus       157 -----------------------------------------------------------~~~~g~~~-----~-------  165 (723)
T 1xfd_A          157 -----------------------------------------------------------VIYNGLSD-----W-------  165 (723)
T ss_dssp             -----------------------------------------------------------TEEEEECC-----H-------
T ss_pred             -----------------------------------------------------------ceECcccc-----e-------
Confidence                                                                       00000000     0       


Q ss_pred             EEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEE
Q psy14511        231 QLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILH  308 (488)
Q Consensus       231 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i  308 (488)
                        ..+.+  ....+.+++|+|||+.|+++...++.+.+|++.....     .+...+..+.+  +|..    ..+..|++
T Consensus       166 --v~~ee--~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~G~~----~~~~~l~~  232 (723)
T 1xfd_A          166 --LYEEE--ILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTG-----SIYPTVKPYHYPKAGSE----NPSISLHV  232 (723)
T ss_dssp             --HHHHT--TSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSS-----SSSCCCEEEECCBTTSC----CCEEEEEE
T ss_pred             --eEEEE--eccCcceEEECCCCCEEEEEEECCCccceEEeeccCC-----cCCCcceeccCCCCCCC----CCeeEEEE
Confidence              00000  1234588999999999999844556777887643211     12233555665  3431    23458999


Q ss_pred             EECcCCCccceeeecC------CccEEEEEEccCCcEEEEEec-----CeEEEEECCCCCCCcccce----------eee
Q psy14511        309 YDVRTHSDYPTAITRE------GDVVCGLKWSPNGRYLASGSN-----NTVKIWDFRQLDAKRPLGL----------IVP  367 (488)
Q Consensus       309 ~d~~~~~~~~~~~~~~------~~~i~~~~~s~~~~~l~~~~d-----~~i~iwd~~~~~~~~~~~~----------~~~  367 (488)
                      ||+.++. ....+..+      ...+..++|+|||++|++..+     ..|++||+.+++....+..          ...
T Consensus       233 ~d~~~~~-~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~  311 (723)
T 1xfd_A          233 IGLNGPT-HDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEP  311 (723)
T ss_dssp             EESSSSC-CCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCC
T ss_pred             EECCCCc-eeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCc
Confidence            9998764 23344433      567899999999999877642     5799999988764433221          134


Q ss_pred             eecCCCCEEEEEccCCCC------eEEEEe-CCCcc--eeEEEeeccccEEE-EEEcCCCCEEEEEeCC---CcEEEEec
Q psy14511        368 KLKREGRELVTSHGKQDC------SLKMWE-YPRLH--LIEELKIHQERILS-AVLSPDQTCVAAASAD---ETISIWNC  434 (488)
Q Consensus       368 ~~~~~~~~l~~~~g~~~~------~i~i~d-~~~~~--~~~~~~~~~~~v~~-~~~s~~~~~l~t~~~d---g~v~iw~~  434 (488)
                      .|+|||+.++..++..++      .|++|| ..+++  ....+..+...+.. ++|+|||+.|+..+.+   +.+++|++
T Consensus       312 ~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~  391 (723)
T 1xfd_A          312 VFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSA  391 (723)
T ss_dssp             EECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEE
T ss_pred             eEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEE
Confidence            899999988875345566      577788 34444  14455544444554 6999999999876655   78999998


Q ss_pred             CCCC---cccccc---ccCCcceEEeecCCCceEEE
Q psy14511        435 FPRD---KKRKAR---QVGSGSSLEFAILKQPVSLT  464 (488)
Q Consensus       435 ~~~~---~~~~~~---~~~~v~~~~~s~~~~~~~~~  464 (488)
                      ....   ...+..   +...+..+.|+|+++.+.+.
T Consensus       392 ~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~  427 (723)
T 1xfd_A          392 NTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLK  427 (723)
T ss_dssp             CSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEE
T ss_pred             eCCCCCCcceecccccCCCCeEEEEECCCCCEEEEE
Confidence            7532   222222   46678899999999988663

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.96  E-value=1.3e-27  Score=238.39  Aligned_cols=318  Identities=10%  Similarity=0.075  Sum_probs=220.2

Q ss_pred             ccCCceEEEeec-CC-----eEEEEEcccCcccceeecccC------------------------ceEEEEEEccCCcEE
Q psy14511          2 CWNGNLLSCGTI-GG-----NILHYDVRTHSDYPTAITREG------------------------DVVCGLKWSPNGRYL   51 (488)
Q Consensus         2 ~~dg~~la~g~~-dg-----~i~iwd~~~~~~~~~~~~~h~------------------------~~V~~l~~sp~g~~l   51 (488)
                      +.||++||+++. |+     .|.+||+.+++.. ..+..|.                        ..|.+++|||||++|
T Consensus        45 SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l  123 (741)
T 2ecf_A           45 APDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTR-LLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRL  123 (741)
T ss_dssp             CTTSSEEEEEECCSSCTTEEEEEEEETTTCCEE-EEECGGGTC--------------------CCEESCCCEECTTSSEE
T ss_pred             ecCCCEEEEEeccCCCCcccEEEEEECCCCcee-EccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEE
Confidence            459999999988 88     9999999988743 3343332                        348899999999999


Q ss_pred             EEecCCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCc----
Q psy14511         52 ASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQ----  127 (488)
Q Consensus        52 as~~d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~----  127 (488)
                      ++++++.|++||+.++... ....+..|...+..++|+|||++|+++.    ++.|++||+.+++...........    
T Consensus       124 ~~~~~~~i~~~d~~~~~~~-~~~~l~~~~~~~~~~~~SPDG~~la~~~----~~~i~~~d~~~g~~~~~~~~~~~~~~~g  198 (741)
T 2ecf_A          124 LFPLGGELYLYDLKQEGKA-AVRQLTHGEGFATDAKLSPKGGFVSFIR----GRNLWVIDLASGRQMQLTADGSTTIGNG  198 (741)
T ss_dssp             EEEETTEEEEEESSSCSTT-SCCBCCCSSSCEEEEEECTTSSEEEEEE----TTEEEEEETTTTEEEECCCCCCSSEEES
T ss_pred             EEEeCCcEEEEECCCCCcc-eEEEcccCCcccccccCCCCCCEEEEEe----CCcEEEEecCCCCEEEeccCCccceecc
Confidence            9999999999999875200 1223556778899999999999877665    669999999988765443322111    


Q ss_pred             ------------cccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCc
Q psy14511        128 ------------ANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSI  195 (488)
Q Consensus       128 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (488)
                                  .....+++++                                                          
T Consensus       199 ~~~~v~~~~~~~~~~~~~SpDg----------------------------------------------------------  220 (741)
T 2ecf_A          199 IAEFVADEEMDRHTGYWWAPDD----------------------------------------------------------  220 (741)
T ss_dssp             CCCHHHHHHSCCCCSEEECTTS----------------------------------------------------------
T ss_pred             ccceeeeeccccccceEECCCC----------------------------------------------------------
Confidence                        0112222211                                                          


Q ss_pred             cccceeeeeeeCCCcEEEEECC---------------------------------CeEEEEECCC-CceEEEEecCCCCC
Q psy14511        196 INDFYTSGLDWGYHDTLAVALD---------------------------------TSVYTWNTKT-NKTQLLVEYPTYDN  241 (488)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~d---------------------------------~~v~iw~~~~-~~~~~~~~~~~~~~  241 (488)
                                   ..++.++.|                                 ..|++||+.+ ++......... +.
T Consensus       221 -------------~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~-~~  286 (741)
T 2ecf_A          221 -------------SAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKE-QD  286 (741)
T ss_dssp             -------------SCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSC-SS
T ss_pred             -------------CEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCC-cc
Confidence                         112222211                                 1788899988 77654433223 67


Q ss_pred             CceEEEEEcCCCCeEEEEeC----CCCcEEEEECCcceeeeeeccccc----cEEEEEe--cCCEEEEeecCCeEEEEEC
Q psy14511        242 AYISCVAWKPRTTDLAVTNT----CTEYIDLWHEQEERLIQKLRTHMH----QVIAMCW--NGNLLSCGTIGGNILHYDV  311 (488)
Q Consensus       242 ~~i~~~~~~~~~~~l~~~~~----~~~~i~i~d~~~~~~~~~~~~~~~----~v~~~~~--~~~~l~~~~~dg~i~i~d~  311 (488)
                      ..+..++| |||+.|++++.    .+..|++||+.+++....+..+..    .+..+.|  ||+++++++.+|.+++|.+
T Consensus       287 ~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~  365 (741)
T 2ecf_A          287 IYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRI  365 (741)
T ss_dssp             EEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEE
T ss_pred             eEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEE
Confidence            78999999 99999998732    356899999999887776655443    3346666  7888899999998888876


Q ss_pred             cCCCccceeeecCCccEEEE-EEccCCcEEEEEe-c-C--eEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCe
Q psy14511        312 RTHSDYPTAITREGDVVCGL-KWSPNGRYLASGS-N-N--TVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCS  386 (488)
Q Consensus       312 ~~~~~~~~~~~~~~~~i~~~-~~s~~~~~l~~~~-d-~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~  386 (488)
                      ..... ...+..+...+..+ .|+|+++.|+..+ + +  .+++|++...                              
T Consensus       366 ~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~------------------------------  414 (741)
T 2ecf_A          366 DSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQ------------------------------  414 (741)
T ss_dssp             CSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETT------------------------------
T ss_pred             cCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcC------------------------------
Confidence            63333 66677777778877 5999998876554 3 3  6666665421                              


Q ss_pred             EEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCC----CcEEEEecCCCC
Q psy14511        387 LKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASAD----ETISIWNCFPRD  438 (488)
Q Consensus       387 i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~d----g~v~iw~~~~~~  438 (488)
                              ++....+.. ...+..++||||+++|+....+    ..+.+|+...+.
T Consensus       415 --------g~~~~~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~~  461 (741)
T 2ecf_A          415 --------GGQPQRLSK-APGMHSASFARNASVYVDSWSNNSTPPQIELFRANGEK  461 (741)
T ss_dssp             --------CCCCEECCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETTSCE
T ss_pred             --------CCCeeeccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcCCCe
Confidence                    222334443 4567899999999998876544    568999876543

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.96  E-value=9.8e-27  Score=230.76  Aligned_cols=347  Identities=10%  Similarity=0.097  Sum_probs=208.1

Q ss_pred             ccCCceEEEeecCCeEEEEEcccCccc-ceeecccC-----------------ceEEEEEEccCCcEEEEecCCeEEEEe
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTHSDY-PTAITREG-----------------DVVCGLKWSPNGRYLASGSNNTVKIWD   63 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~~~~-~~~~~~h~-----------------~~V~~l~~sp~g~~las~~d~~i~vwd   63 (488)
                      .|.|+.+++++.++ | +||+.+++.+ ...+ .|.                 ..|.+++|||| ++++.+.++.|++||
T Consensus        32 ~w~g~~~~~~~~~~-i-~~d~~tg~~~~~~l~-~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~~~~i~~~d  107 (706)
T 2z3z_A           32 QWMGDNYVFIEGDD-L-VFNKANGKSAQTTRF-SAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFTQGGLVGFD  107 (706)
T ss_dssp             EEETTEEEEEETTE-E-EEEC-------CEEE-EHHHHHTTC-----------CCCEEEEETTT-TEEEEEETTEEEEEE
T ss_pred             cCcCCeEEEEeCCc-E-EEECCCCcEeeEEee-chhHhhhhccchhccccccccCceeEEECCC-CeEEEEECCEEEEEE
Confidence            35466777777777 8 9999998752 2333 322                 46999999999 777777789999999


Q ss_pred             ccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCC-----CeeeeeeecCCCc-----------
Q psy14511         64 FRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMN-----GKEKCHVKTDSQQ-----------  127 (488)
Q Consensus        64 ~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~-----~~~~~~~~~~~~~-----------  127 (488)
                      +.+++..    .+..+...+.+++|+|||++++++ .   ++.|++|++.+     ++...........           
T Consensus       108 ~~~~~~~----~l~~~~~~~~~~~~SpdG~~la~~-~---~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee  179 (706)
T 2z3z_A          108 MLARKVT----YLFDTNEETASLDFSPVGDRVAYV-R---NHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQRE  179 (706)
T ss_dssp             TTTTEEE----EEECCTTCCTTCEECTTSSEEEEE-E---TTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGC
T ss_pred             CCCCceE----EccCCcccccCCcCCCCCCEEEEE-E---CCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhh
Confidence            9875422    234466778999999999987774 4   89999999988     7655433322211           


Q ss_pred             ---cccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeee
Q psy14511        128 ---ANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGL  204 (488)
Q Consensus       128 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (488)
                         .....+++++.   .++...................                    ..+.             ....
T Consensus       180 ~~~~~~~~~SpDg~---~la~~~~d~~~~~~~~~~~~~~--------------------~~~~-------------~~~~  223 (706)
T 2z3z_A          180 FGIEKGTFWSPKGS---CLAFYRMDQSMVKPTPIVDYHP--------------------LEAE-------------SKPL  223 (706)
T ss_dssp             TTCCCSEEECTTSS---EEEEEEEECTTSCCEEEEECCS--------------------SSCE-------------EEEE
T ss_pred             cCCCceEEECCCCC---EEEEEEECCCCCceEEeeccCC--------------------CCCc-------------eEEe
Confidence               12222222210   0000000000000000000000                    0000             0000


Q ss_pred             eeC-CCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCC-----cEEEEECCcceeee
Q psy14511        205 DWG-YHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTE-----YIDLWHEQEERLIQ  278 (488)
Q Consensus       205 ~~~-~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~-----~i~i~d~~~~~~~~  278 (488)
                      .+. .+   ....+..|++||+.+++......... +...+.+++|+|||+.|+++ +.++     .|++||+.+++...
T Consensus       224 ~y~~~g---~~~~~~~l~~~d~~~~~~~~~~~~~~-~~~~~~~~~~spdg~~l~~~-~~~~~~~~~~v~~~d~~~g~~~~  298 (706)
T 2z3z_A          224 YYPMAG---TPSHHVTVGIYHLATGKTVYLQTGEP-KEKFLTNLSWSPDENILYVA-EVNRAQNECKVNAYDAETGRFVR  298 (706)
T ss_dssp             CCCBTT---SCCCEEEEEEEETTTTEEEECCCCSC-TTCEEEEEEECTTSSEEEEE-EECTTSCEEEEEEEETTTCCEEE
T ss_pred             eCCCCC---CCCCeeEEEEEECCCCceEeeccCCC-CceeEeeEEEECCCCEEEEE-EeCCCCCeeEEEEEECCCCceee
Confidence            000 00   00134679999999987655443223 66789999999999999987 5554     89999999883333


Q ss_pred             eec-c-ccc---cEEEEEe----cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEE-EEEccCCcEEEEEe-c-C
Q psy14511        279 KLR-T-HMH---QVIAMCW----NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCG-LKWSPNGRYLASGS-N-N  346 (488)
Q Consensus       279 ~~~-~-~~~---~v~~~~~----~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~-~~~s~~~~~l~~~~-d-~  346 (488)
                      .+. . +..   .+..+.|    ++++++++..++.+++|++.........+..+...+.. ++|+|+++.|+.++ + +
T Consensus       299 ~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~  378 (706)
T 2z3z_A          299 TLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEAS  378 (706)
T ss_dssp             EEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSC
T ss_pred             EEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCC
Confidence            332 2 211   1233444    77889999999999999887333455666777777776 79999998887665 2 2


Q ss_pred             eEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCC
Q psy14511        347 TVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASAD  426 (488)
Q Consensus       347 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~d  426 (488)
                                                         .....|+.||+.+++ ...+. |...+.+++|||||++|+....+
T Consensus       379 -----------------------------------~~~~~l~~~d~~~~~-~~~l~-~~~~~~~~~~spdg~~l~~~~~~  421 (706)
T 2z3z_A          379 -----------------------------------PLERHFYCIDIKGGK-TKDLT-PESGMHRTQLSPDGSAIIDIFQS  421 (706)
T ss_dssp             -----------------------------------TTCBEEEEEETTCCC-CEESC-CSSSEEEEEECTTSSEEEEEEEC
T ss_pred             -----------------------------------CceEEEEEEEcCCCC-ceecc-CCCceEEEEECCCCCEEEEEecC
Confidence                                               001134444444443 22333 55678999999999998876543


Q ss_pred             ----CcEEEEecCCCC
Q psy14511        427 ----ETISIWNCFPRD  438 (488)
Q Consensus       427 ----g~v~iw~~~~~~  438 (488)
                          +.|++||+.+++
T Consensus       422 ~~~p~~i~l~d~~~~~  437 (706)
T 2z3z_A          422 PTVPRKVTVTNIGKGS  437 (706)
T ss_dssp             SSCSCEEEEEESSSCE
T ss_pred             CCCCcEEEEEECCCCe
Confidence                569999998876

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.96  E-value=1.8e-26  Score=230.28  Aligned_cols=300  Identities=9%  Similarity=0.073  Sum_probs=216.9

Q ss_pred             CceEEEEEEccCCcEEEEec--CC-----eEEEEeccccCcCCCcccccccc----------------------cceeEE
Q psy14511         36 GDVVCGLKWSPNGRYLASGS--NN-----TVKIWDFRQLDAKRPQVNNQCHL----------------------SAVKAI   86 (488)
Q Consensus        36 ~~~V~~l~~sp~g~~las~~--d~-----~i~vwd~~~~~~~~~~~~~~~h~----------------------~~v~~l   86 (488)
                      ...|.+++|||||++|++++  |+     .|++||+.+++... +.....+.                      ..|.++
T Consensus        36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  114 (741)
T 2ecf_A           36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRL-LVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDY  114 (741)
T ss_dssp             CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEE-EECGGGTC--------------------CCEESCCC
T ss_pred             CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeE-ccchhhcccccccccchhhhhhhhhhhccccCccee
Confidence            45699999999999999986  67     89999998765332 21122222                      347899


Q ss_pred             EEecCCCeEEeeeCCcccceEEEEecCCC---eeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecccc
Q psy14511         87 AWCPWEPTLLATGGGICDQTVRLWNSMNG---KEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSK  163 (488)
Q Consensus        87 ~~~~~~~~l~~~~~~~~d~~i~vwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (488)
                      +|+|||++|++++    ++.|++||+.++   ... .                                           
T Consensus       115 ~~SpDg~~l~~~~----~~~i~~~d~~~~~~~~~~-~-------------------------------------------  146 (741)
T 2ecf_A          115 QWSPDAQRLLFPL----GGELYLYDLKQEGKAAVR-Q-------------------------------------------  146 (741)
T ss_dssp             EECTTSSEEEEEE----TTEEEEEESSSCSTTSCC-B-------------------------------------------
T ss_pred             EECCCCCEEEEEe----CCcEEEEECCCCCcceEE-E-------------------------------------------
Confidence            9999998877665    578999998765   210 0                                           


Q ss_pred             ccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCc
Q psy14511        164 RTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAY  243 (488)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~  243 (488)
                                                                                              +.. +...
T Consensus       147 ------------------------------------------------------------------------l~~-~~~~  153 (741)
T 2ecf_A          147 ------------------------------------------------------------------------LTH-GEGF  153 (741)
T ss_dssp             ------------------------------------------------------------------------CCC-SSSC
T ss_pred             ------------------------------------------------------------------------ccc-CCcc
Confidence                                                                                    001 4456


Q ss_pred             eEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecccccc----------------EEEEEe--cCCEEEEeecCC-
Q psy14511        244 ISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQ----------------VIAMCW--NGNLLSCGTIGG-  304 (488)
Q Consensus       244 i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~----------------v~~~~~--~~~~l~~~~~dg-  304 (488)
                      +..++|+|||++|+++ + ++.|++||+.+++.......+...                +..+.|  ||+.|++++.|+ 
T Consensus       154 ~~~~~~SPDG~~la~~-~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~  231 (741)
T 2ecf_A          154 ATDAKLSPKGGFVSFI-R-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDES  231 (741)
T ss_dssp             EEEEEECTTSSEEEEE-E-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECT
T ss_pred             cccccCCCCCCEEEEE-e-CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCC
Confidence            8899999999999988 4 568999999987766555444332                355677  789999887765 


Q ss_pred             --------------------------------eEEEEECcC-CCccceeee--cCCccEEEEEEccCCcEEEEEe-----
Q psy14511        305 --------------------------------NILHYDVRT-HSDYPTAIT--REGDVVCGLKWSPNGRYLASGS-----  344 (488)
Q Consensus       305 --------------------------------~i~i~d~~~-~~~~~~~~~--~~~~~i~~~~~s~~~~~l~~~~-----  344 (488)
                                                      .|++||+.+ ++ ......  .|...+..++| |||++|+++.     
T Consensus       232 ~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~  309 (741)
T 2ecf_A          232 PVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQ-TQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQ  309 (741)
T ss_dssp             TSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCC-CEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTS
T ss_pred             CCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCc-eEEecCCCCcceEEEEEEe-CCCCEEEEEEecccC
Confidence                                            788999987 54 222222  47778999999 9999998764     


Q ss_pred             -cCeEEEEECCCCCCCccccee---------eeeecCCCCEEEEEccCCCCeEEEEeCC-CcceeEEEeeccccEEEE-E
Q psy14511        345 -NNTVKIWDFRQLDAKRPLGLI---------VPKLKREGRELVTSHGKQDCSLKMWEYP-RLHLIEELKIHQERILSA-V  412 (488)
Q Consensus       345 -d~~i~iwd~~~~~~~~~~~~~---------~~~~~~~~~~l~~~~g~~~~~i~i~d~~-~~~~~~~~~~~~~~v~~~-~  412 (488)
                       +..|++||+.+++....+...         ...|+|||+.+++  +..++.++||.+. +++ ...+..|...|..+ .
T Consensus       310 ~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~--~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~  386 (741)
T 2ecf_A          310 KKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWS--SERTGFQHLYRIDSKGK-AAALTHGNWSVDELLA  386 (741)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEE--ECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEE
T ss_pred             CeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEE--ecCCCccEEEEEcCCCC-eeeeeecceEEEeEeE
Confidence             267999999987654333221         2389999997766  5678877777664 345 77888888888887 5


Q ss_pred             EcCCCCEEEE-EeCCC--cEEEEecCC-CCccccccccCCcceEEeecCCCceEEE
Q psy14511        413 LSPDQTCVAA-ASADE--TISIWNCFP-RDKKRKARQVGSGSSLEFAILKQPVSLT  464 (488)
Q Consensus       413 ~s~~~~~l~t-~~~dg--~v~iw~~~~-~~~~~~~~~~~~v~~~~~s~~~~~~~~~  464 (488)
                      |+||++.|+. ++.++  .+++|++.. +...........+.++.|+||++.+...
T Consensus       387 ~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~~~~~~~~~~spdg~~l~~~  442 (741)
T 2ecf_A          387 VDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSKAPGMHSASFARNASVYVDS  442 (741)
T ss_dssp             EETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCCSCSEEEEEECTTSSEEEEE
T ss_pred             EeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeecccCCCceEEEECCCCCEEEEE
Confidence            9999997765 44555  899999874 4433333336667899999999988664

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.95  E-value=8.1e-26  Score=204.01  Aligned_cols=306  Identities=11%  Similarity=0.072  Sum_probs=198.6

Q ss_pred             CccCCceEEEeecCCeEEEEEccc-CcccceeecccCceEEEEEEccCCcEEEEec--CCeEEEEecc--ccCcCCCccc
Q psy14511          1 MCWNGNLLSCGTIGGNILHYDVRT-HSDYPTAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFR--QLDAKRPQVN   75 (488)
Q Consensus         1 ~~~dg~~la~g~~dg~i~iwd~~~-~~~~~~~~~~h~~~V~~l~~sp~g~~las~~--d~~i~vwd~~--~~~~~~~~~~   75 (488)
                      |+.+..++++++.++.|.+||+.. +.........|...+.+++|+|+|++|++++  ++.|.+|++.  +++ ...+..
T Consensus         1 ~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~-~~~~~~   79 (343)
T 1ri6_A            1 MSLKQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGA-LTFAAE   79 (343)
T ss_dssp             -CCEEEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCC-EEEEEE
T ss_pred             CCceEEEEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCc-eeeccc
Confidence            444555666668899999999963 3211222345777899999999999888887  4999999997  332 222223


Q ss_pred             ccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccc
Q psy14511         76 NQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDR  155 (488)
Q Consensus        76 ~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (488)
                      +..+ ..+..++|+|+++++++++..  ++.|.+||+.++.....                                   
T Consensus        80 ~~~~-~~~~~~~~s~dg~~l~~~~~~--~~~i~~~d~~~~~~~~~-----------------------------------  121 (343)
T 1ri6_A           80 SALP-GSLTHISTDHQGQFVFVGSYN--AGNVSVTRLEDGLPVGV-----------------------------------  121 (343)
T ss_dssp             EECS-SCCSEEEECTTSSEEEEEETT--TTEEEEEEEETTEEEEE-----------------------------------
T ss_pred             cccC-CCCcEEEEcCCCCEEEEEecC--CCeEEEEECCCCccccc-----------------------------------
Confidence            3333 378999999999988888764  88999999853321100                                   


Q ss_pred             cceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEe
Q psy14511        156 KKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVE  235 (488)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~  235 (488)
                                                                                                 .....
T Consensus       122 ---------------------------------------------------------------------------~~~~~  126 (343)
T 1ri6_A          122 ---------------------------------------------------------------------------VDVVE  126 (343)
T ss_dssp             ---------------------------------------------------------------------------EEEEC
T ss_pred             ---------------------------------------------------------------------------ccccc
Confidence                                                                                       00111


Q ss_pred             cCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCc-ceeee----eecc-ccccEEEEEe--cCCEEEEe-ecCCeE
Q psy14511        236 YPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE-ERLIQ----KLRT-HMHQVIAMCW--NGNLLSCG-TIGGNI  306 (488)
Q Consensus       236 ~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~-~~~~~----~~~~-~~~~v~~~~~--~~~~l~~~-~~dg~i  306 (488)
                          ....+.+++|+|+++++++++..++.|.+||+.+ ++...    .+.. ....+..++|  ++++++++ ..++.+
T Consensus       127 ----~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i  202 (343)
T 1ri6_A          127 ----GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSV  202 (343)
T ss_dssp             ----CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEE
T ss_pred             ----CCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEE
Confidence                2234778999999999988844899999999987 54322    2222 2346777888  67766554 478999


Q ss_pred             EEEECcCCC-cc--ceeee---cC---CccEEEEEEccCCcEEEEEe--cCeEEEEECCCCCCCcccceeeeeecCCCCE
Q psy14511        307 LHYDVRTHS-DY--PTAIT---RE---GDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAKRPLGLIVPKLKREGRE  375 (488)
Q Consensus       307 ~i~d~~~~~-~~--~~~~~---~~---~~~i~~~~~s~~~~~l~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  375 (488)
                      .+|++.... ..  .....   ..   ...+..++|+|+|++|+++.  ++.|.+||+...                   
T Consensus       203 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~-------------------  263 (343)
T 1ri6_A          203 DVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSED-------------------  263 (343)
T ss_dssp             EEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT-------------------
T ss_pred             EEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCC-------------------
Confidence            999996421 11  11111   11   23466788999998777554  377777776531                   


Q ss_pred             EEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEe-CCCcEEEEecC--CCCcc--ccccccCCcc
Q psy14511        376 LVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAAS-ADETISIWNCF--PRDKK--RKARQVGSGS  450 (488)
Q Consensus       376 l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~-~dg~v~iw~~~--~~~~~--~~~~~~~~v~  450 (488)
                              .+        +.+.+..+..+.. +..++|+|++++|++++ .++.|.+|+++  +++..  ..........
T Consensus       264 --------~~--------~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~g~~p~  326 (343)
T 1ri6_A          264 --------GS--------VLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPM  326 (343)
T ss_dssp             --------SC--------CEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECSSSCC
T ss_pred             --------CC--------ceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccccccCCCCe
Confidence                    00        1223334443444 88999999999988888 68999999655  55433  2222335567


Q ss_pred             eEEeecCCCc
Q psy14511        451 SLEFAILKQP  460 (488)
Q Consensus       451 ~~~~s~~~~~  460 (488)
                      +++|.|+.+.
T Consensus       327 ~i~~~~~~~~  336 (343)
T 1ri6_A          327 WVVVNAHEGG  336 (343)
T ss_dssp             EEEEEEEC--
T ss_pred             eEEEEcccCC
Confidence            7888775543

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.95  E-value=5.3e-25  Score=197.54  Aligned_cols=292  Identities=11%  Similarity=0.053  Sum_probs=192.2

Q ss_pred             CceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec--CCeEEEEeccccCcCCCcccccccccc
Q psy14511          5 GNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAKRPQVNNQCHLSA   82 (488)
Q Consensus         5 g~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~--d~~i~vwd~~~~~~~~~~~~~~~h~~~   82 (488)
                      +..+++++.++.|.+||..+++.. ..+..+...+ +++|+|+|++|++++  ++.|.+||..+++..  ...+..+..+
T Consensus        10 ~~~~v~~~~~~~v~~~d~~~~~~~-~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~--~~~~~~~~~~   85 (331)
T 3u4y_A           10 NFGIVVEQHLRRISFFSTDTLEIL-NQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPK--VVAIQEGQSS   85 (331)
T ss_dssp             CEEEEEEGGGTEEEEEETTTCCEE-EEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCE--EEEEEECSSC
T ss_pred             CEEEEEecCCCeEEEEeCccccee-eeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCcee--EEecccCCCC
Confidence            445778888999999999998854 3444555666 999999999776665  789999999875431  3334445555


Q ss_pred             eeEEEEecCCCeEEeeeCCccc-c--eEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeecccccee
Q psy14511         83 VKAIAWCPWEPTLLATGGGICD-Q--TVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVL  159 (488)
Q Consensus        83 v~~l~~~~~~~~l~~~~~~~~d-~--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (488)
                      ..+++|+|+++++++...   + +  .|.+||+.+++.+..+                                      
T Consensus        86 ~~~~~~s~dg~~l~~~~~---~~~~~~i~v~d~~~~~~~~~~--------------------------------------  124 (331)
T 3u4y_A           86 MADVDITPDDQFAVTVTG---LNHPFNMQSYSFLKNKFISTI--------------------------------------  124 (331)
T ss_dssp             CCCEEECTTSSEEEECCC---SSSSCEEEEEETTTTEEEEEE--------------------------------------
T ss_pred             ccceEECCCCCEEEEecC---CCCcccEEEEECCCCCeEEEE--------------------------------------
Confidence            555999999998884443   3 3  8999998776643221                                      


Q ss_pred             ccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCC
Q psy14511        160 NQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTY  239 (488)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~  239 (488)
                                                                                                 .    
T Consensus       125 ---------------------------------------------------------------------------~----  125 (331)
T 3u4y_A          125 ---------------------------------------------------------------------------P----  125 (331)
T ss_dssp             ---------------------------------------------------------------------------E----
T ss_pred             ---------------------------------------------------------------------------E----
Confidence                                                                                       1    


Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCc-EEEEECCcceee----eeeccccccEEEEEe--cCCEEE-EeecCCeEEEEEC
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEY-IDLWHEQEERLI----QKLRTHMHQVIAMCW--NGNLLS-CGTIGGNILHYDV  311 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~-i~i~d~~~~~~~----~~~~~~~~~v~~~~~--~~~~l~-~~~~dg~i~i~d~  311 (488)
                      ......+++|+|+|+++++++..++. +.+|++.....+    ............+++  +++.++ ++..++.|++||+
T Consensus       126 ~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~  205 (331)
T 3u4y_A          126 IPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILET  205 (331)
T ss_dssp             CCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred             CCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEEC
Confidence            22345789999999877777466688 999998753322    111123445677888  677554 4556899999999


Q ss_pred             cCCCcc--ceeeecCCccEEEEEEccCCcEEEEEe--cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeE
Q psy14511        312 RTHSDY--PTAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSL  387 (488)
Q Consensus       312 ~~~~~~--~~~~~~~~~~i~~~~~s~~~~~l~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i  387 (488)
                      .+++..  ...+..+ ..+..++|+|+|++++++.  ++.|.+||+.+++..                            
T Consensus       206 ~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~----------------------------  256 (331)
T 3u4y_A          206 QNPENITLLNAVGTN-NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLS----------------------------  256 (331)
T ss_dssp             SSTTSCEEEEEEECS-SCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEE----------------------------
T ss_pred             CCCcccceeeeccCC-CCCceEEECCCCCEEEEEEcCCCEEEEEECCCCcee----------------------------
Confidence            876420  3444433 4567899999999777665  366777776644210                            


Q ss_pred             EEEeCCCcceeEEEee-------ccccEEEEEEcCCCCEEEEEeC-CCcEEEEecCCCCccccccccCCcceEEeecCC
Q psy14511        388 KMWEYPRLHLIEELKI-------HQERILSAVLSPDQTCVAAASA-DETISIWNCFPRDKKRKARQVGSGSSLEFAILK  458 (488)
Q Consensus       388 ~i~d~~~~~~~~~~~~-------~~~~v~~~~~s~~~~~l~t~~~-dg~v~iw~~~~~~~~~~~~~~~~v~~~~~s~~~  458 (488)
                               .+..+..       .......++|+||+++|++++. ++.|.+||+.+.................++|+.
T Consensus       257 ---------~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~g~~~~~~~~~  326 (331)
T 3u4y_A          257 ---------FVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKVVGYVAGIEANGGIAICHPDK  326 (331)
T ss_dssp             ---------EEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEEEECTTCCCBSCEEECCCC-
T ss_pred             ---------eecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCcccceecccccCCeEEECCcc
Confidence                     0111111       1112356899999998876654 579999999876654433333333334455543

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.95  E-value=1.3e-24  Score=200.18  Aligned_cols=250  Identities=13%  Similarity=0.093  Sum_probs=183.3

Q ss_pred             CceEEEeecC------CeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-C---CeEEEEeccccCcCCCcc
Q psy14511          5 GNLLSCGTIG------GNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-N---NTVKIWDFRQLDAKRPQV   74 (488)
Q Consensus         5 g~~la~g~~d------g~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d---~~i~vwd~~~~~~~~~~~   74 (488)
                      +..++.++.+      +.|++||+....  ...+.+|...|.+++|||||++||+++ +   ..|++||+.+++..    
T Consensus       143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~--~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~----  216 (415)
T 2hqs_A          143 RTRIAYVVQTNGGQFPYELRVSDYDGYN--QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR----  216 (415)
T ss_dssp             TCEEEEEEECSSSSCCEEEEEEETTSCS--CEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE----
T ss_pred             CCEEEEEEecCCCCccceEEEEcCCCCC--CEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE----
Confidence            5666666654      799999997543  366788999999999999999999987 5   49999999876532    


Q ss_pred             cccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeecc
Q psy14511         75 NNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEID  154 (488)
Q Consensus        75 ~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (488)
                      .+..|...+.+++|+|||++|+.+++...+..|++||+.+++..                                    
T Consensus       217 ~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~------------------------------------  260 (415)
T 2hqs_A          217 QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR------------------------------------  260 (415)
T ss_dssp             EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE------------------------------------
T ss_pred             EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEE------------------------------------
Confidence            34567789999999999998886665311334778887655421                                    


Q ss_pred             ccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEE
Q psy14511        155 RKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLV  234 (488)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~  234 (488)
                                                                                                      
T Consensus       261 --------------------------------------------------------------------------------  260 (415)
T 2hqs_A          261 --------------------------------------------------------------------------------  260 (415)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ecCCCCCCceEEEEEcCCCCeEEEEeCCCC--cEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecC---CeEE
Q psy14511        235 EYPTYDNAYISCVAWKPRTTDLAVTNTCTE--YIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIG---GNIL  307 (488)
Q Consensus       235 ~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~--~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d---g~i~  307 (488)
                      .+.. +...+.+++|+|+|+.|++++..++  .|.+||+.+++. ..+..+...+.+++|  +|++|++++.+   ..|+
T Consensus       261 ~l~~-~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~  338 (415)
T 2hqs_A          261 QVTD-GRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIA  338 (415)
T ss_dssp             ECCC-CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEE
T ss_pred             eCcC-CCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEE
Confidence            1111 5567889999999999998844455  677779887653 445556677888888  78999888764   5899


Q ss_pred             EEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCe
Q psy14511        308 HYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCS  386 (488)
Q Consensus       308 i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~  386 (488)
                      +||+.++..  ..+..+. .+.+++|+|+|++|++++ ++.                                    ...
T Consensus       339 ~~d~~~~~~--~~l~~~~-~~~~~~~spdg~~l~~~s~~~~------------------------------------~~~  379 (415)
T 2hqs_A          339 KQDLATGGV--QVLSSTF-LDETPSLAPNGTMVIYSSSQGM------------------------------------GSV  379 (415)
T ss_dssp             EEETTTCCE--EECCCSS-SCEEEEECTTSSEEEEEEEETT------------------------------------EEE
T ss_pred             EEECCCCCE--EEecCCC-CcCCeEEcCCCCEEEEEEcCCC------------------------------------ccE
Confidence            999987642  3455554 789999999999998886 320                                    113


Q ss_pred             EEEEeCCCcceeEEEeeccccEEEEEEcCCCC
Q psy14511        387 LKMWEYPRLHLIEELKIHQERILSAVLSPDQT  418 (488)
Q Consensus       387 i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~  418 (488)
                      |++||+. ++....+..|.+.|.+++|+|.-.
T Consensus       380 l~~~d~~-g~~~~~l~~~~~~v~~~~~~~~~~  410 (415)
T 2hqs_A          380 LNLVSTD-GRFKARLPATDGQVKFPAWSPYLH  410 (415)
T ss_dssp             EEEEETT-SCCEEECCCSSSEEEEEEECCCCC
T ss_pred             EEEEECC-CCcEEEeeCCCCCCcCCccccccc
Confidence            4444443 344667888999999999999643

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.94  E-value=6.9e-24  Score=192.14  Aligned_cols=277  Identities=10%  Similarity=0.053  Sum_probs=206.3

Q ss_pred             cCceEEEEEEccCCcEEEEec--------CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccce
Q psy14511         35 EGDVVCGLKWSPNGRYLASGS--------NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQT  106 (488)
Q Consensus        35 h~~~V~~l~~sp~g~~las~~--------d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~  106 (488)
                      ....+..++|+|+|++|++++        ++.|.+||..+++....+   . ....+..++|+|++++++++...  ++.
T Consensus        39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~---~-~~~~~~~~~~s~dg~~l~v~~~~--~~~  112 (353)
T 3vgz_A           39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAI---H-NDLKPFGATINNTTQTLWFGNTV--NSA  112 (353)
T ss_dssp             EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEE---E-ESSCCCSEEEETTTTEEEEEETT--TTE
T ss_pred             hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEE---e-cCCCcceEEECCCCCEEEEEecC--CCE
Confidence            345678999999999888876        568999999875533322   2 23457889999999988877764  899


Q ss_pred             EEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCC
Q psy14511        107 VRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKP  186 (488)
Q Consensus       107 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (488)
                      |.+||+.+++.+..+..+....                                                          
T Consensus       113 v~~~d~~~~~~~~~~~~~~~~~----------------------------------------------------------  134 (353)
T 3vgz_A          113 VTAIDAKTGEVKGRLVLDDRKR----------------------------------------------------------  134 (353)
T ss_dssp             EEEEETTTCCEEEEEESCCCCC----------------------------------------------------------
T ss_pred             EEEEeCCCCeeEEEEecCCCcc----------------------------------------------------------
Confidence            9999998887654443321000                                                          


Q ss_pred             ceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEe-CCCCc
Q psy14511        187 ERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTN-TCTEY  265 (488)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~~~~~  265 (488)
                                                               .      . .. ....+.+++|+|+++.+++++ ..++.
T Consensus       135 -----------------------------------------~------~-~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~  165 (353)
T 3vgz_A          135 -----------------------------------------T------E-EV-RPLQPRELVADDATNTVYISGIGKESV  165 (353)
T ss_dssp             -----------------------------------------C------S-SC-CCCEEEEEEEETTTTEEEEEEESSSCE
T ss_pred             -----------------------------------------c------c-cc-CCCCCceEEECCCCCEEEEEecCCCce
Confidence                                                     0      0 00 122367899999999888884 35788


Q ss_pred             EEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeec----CCccEEEEEEccCCcE
Q psy14511        266 IDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITR----EGDVVCGLKWSPNGRY  339 (488)
Q Consensus       266 i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~----~~~~i~~~~~s~~~~~  339 (488)
                      |.+||..+++.+..+..+...+..+.+  +++.+++++.++.|.+||+.+++ ....+..    +...+..++|+|++++
T Consensus       166 i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~s~dg~~  244 (353)
T 3vgz_A          166 IWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNK-ILSRKKLLDDGKEHFFINISLDTARQR  244 (353)
T ss_dssp             EEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTE-EEEEEECCCSSSCCCEEEEEEETTTTE
T ss_pred             EEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCe-EEEEEEcCCCCCCcccceEEECCCCCE
Confidence            999999999888888755555666666  78999999999999999998864 3333332    4556788999999998


Q ss_pred             EEEEe-c-CeEEEEECCCCCCCccccee---eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEc
Q psy14511        340 LASGS-N-NTVKIWDFRQLDAKRPLGLI---VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLS  414 (488)
Q Consensus       340 l~~~~-d-~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s  414 (488)
                      +++++ + +.|.+||..+++....+...   ...|+|++++++++ ...++.|.+||..+++.+..+... ..+.+++|+
T Consensus       245 l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~-~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s  322 (353)
T 3vgz_A          245 AFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVT-HRQAGKVSVIDAKSYKVVKTFDTP-THPNSLALS  322 (353)
T ss_dssp             EEEEESSSSEEEEEETTTCCEEEEEECSSCCCEEEETTTTEEEEE-ETTTTEEEEEETTTTEEEEEEECC-SEEEEEEEC
T ss_pred             EEEEeCCCCEEEEEECCCCcEEEEEEcCCCceEEECCCCCEEEEE-ECCCCeEEEEECCCCeEEEEEecC-CCCCeEEEc
Confidence            87776 4 99999999887654333221   23899999987765 557899999999999988887754 468999999


Q ss_pred             CCCCEEEEEeCCC
Q psy14511        415 PDQTCVAAASADE  427 (488)
Q Consensus       415 ~~~~~l~t~~~dg  427 (488)
                      |||++|+.+..++
T Consensus       323 ~dg~~l~v~~~~~  335 (353)
T 3vgz_A          323 ADGKTLYVSVKQK  335 (353)
T ss_dssp             TTSCEEEEEEECC
T ss_pred             CCCCEEEEEEccc
Confidence            9999887776654

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.94  E-value=1e-24  Score=192.43  Aligned_cols=268  Identities=14%  Similarity=0.117  Sum_probs=190.6

Q ss_pred             EeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEecCCeEEEEeccc-cCcCCCccccccc-ccceeEEE
Q psy14511         10 CGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQ-LDAKRPQVNNQCH-LSAVKAIA   87 (488)
Q Consensus        10 ~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~-~~~~~~~~~~~~h-~~~v~~l~   87 (488)
                      .++.++.|.+||+.+++.  ..+..|...|.+++|+|+|++|++++++.|++||+.+ ++...   ....| ...+.+++
T Consensus        17 ~~~~~~~i~~~d~~~~~~--~~~~~~~~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~---~~~~~~~~~~~~~~   91 (297)
T 2ojh_A           17 GGSMRSSIEIFNIRTRKM--RVVWQTPELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPEK---VDTGFATICNNDHG   91 (297)
T ss_dssp             -CCCCEEEEEEETTTTEE--EEEEEESSCCEEEEECTTSSEEEEEETTEEEEEESSSCCSCEE---CCCTTCCCBCSCCE
T ss_pred             CCCcceeEEEEeCCCCce--eeeccCCcceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCceE---eccccccccccceE
Confidence            345789999999988773  3466788999999999999999999999999999987 54332   22334 47889999


Q ss_pred             EecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecccccccc
Q psy14511         88 WCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVS  167 (488)
Q Consensus        88 ~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (488)
                      |+|++++++++... .++...+|.++...                                                   
T Consensus        92 ~spdg~~l~~~~~~-~~~~~~l~~~~~~~---------------------------------------------------  119 (297)
T 2ojh_A           92 ISPDGALYAISDKV-EFGKSAIYLLPSTG---------------------------------------------------  119 (297)
T ss_dssp             ECTTSSEEEEEECT-TTSSCEEEEEETTC---------------------------------------------------
T ss_pred             ECCCCCEEEEEEeC-CCCcceEEEEECCC---------------------------------------------------
Confidence            99999988887731 14455555543111                                                   


Q ss_pred             ceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEE
Q psy14511        168 PTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCV  247 (488)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~  247 (488)
                                                                                  +.. ..+.    ....+..+
T Consensus       120 ------------------------------------------------------------~~~-~~~~----~~~~~~~~  134 (297)
T 2ojh_A          120 ------------------------------------------------------------GTP-RLMT----KNLPSYWH  134 (297)
T ss_dssp             ------------------------------------------------------------CCC-EECC----SSSSEEEE
T ss_pred             ------------------------------------------------------------Cce-EEee----cCCCccce
Confidence                                                                        110 0011    22247889


Q ss_pred             EEcCCCCeEEEEeCCCCcEEEEECCc-ceeeeeeccccccEEEEEe--cCCEEEEee-cCCeEEEEECcCCCccceeeec
Q psy14511        248 AWKPRTTDLAVTNTCTEYIDLWHEQE-ERLIQKLRTHMHQVIAMCW--NGNLLSCGT-IGGNILHYDVRTHSDYPTAITR  323 (488)
Q Consensus       248 ~~~~~~~~l~~~~~~~~~i~i~d~~~-~~~~~~~~~~~~~v~~~~~--~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~  323 (488)
                      +|+|+++.++.++..++.+++|+++. ......+..+...+.++.|  +++.++.++ .++.+++|++.........+..
T Consensus       135 ~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~  214 (297)
T 2ojh_A          135 GWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITD  214 (297)
T ss_dssp             EECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCC
T ss_pred             EECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEec
Confidence            99999999885547889999998532 2344566677888999999  678777665 5899999998744455667777


Q ss_pred             CCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcce--eEE
Q psy14511        324 EGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHL--IEE  400 (488)
Q Consensus       324 ~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~--~~~  400 (488)
                      +...+..++|+|+|++|++++ ++...    ...                        ...++.|++||+.+++.  +..
T Consensus       215 ~~~~~~~~~~s~dg~~l~~~~~~~~~~----~~~------------------------~~~~~~l~~~d~~~~~~~~~~~  266 (297)
T 2ojh_A          215 SAYGDWFPHPSPSGDKVVFVSYDADVF----DHP------------------------RDLDVRVQLMDMDGGNVETLFD  266 (297)
T ss_dssp             CSEEEEEEEECTTSSEEEEEEEETTCC----SCC------------------------SSEEEEEEEEETTSCSCEEEEE
T ss_pred             CCcccCCeEECCCCCEEEEEEcCCCCC----ccc------------------------ccCceEEEEEecCCCCceeeec
Confidence            888899999999999998876 32100    000                        11234577777766654  344


Q ss_pred             EeeccccEEEEEEcCCCCEEEEEeCCC
Q psy14511        401 LKIHQERILSAVLSPDQTCVAAASADE  427 (488)
Q Consensus       401 ~~~~~~~v~~~~~s~~~~~l~t~~~dg  427 (488)
                      +.+|...+..++|+||+++|++++.|.
T Consensus       267 ~~~~~~~~~~~~~spdg~~l~~~~~~~  293 (297)
T 2ojh_A          267 LFGGQGTMNSPNWSPDGDEFAYVRYFP  293 (297)
T ss_dssp             EEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred             cCCCCcccccceECCCCCEEEEEEecc
Confidence            557888899999999999999887664

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.94  E-value=2.8e-24  Score=213.11  Aligned_cols=218  Identities=13%  Similarity=0.089  Sum_probs=160.3

Q ss_pred             CceEEEEEcCCCCeEEEEeCCCCcEEEEECCc-----ceeeeeecccccc--------------EEEEEe--cCCEEEEe
Q psy14511        242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE-----ERLIQKLRTHMHQ--------------VIAMCW--NGNLLSCG  300 (488)
Q Consensus       242 ~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~-----~~~~~~~~~~~~~--------------v~~~~~--~~~~l~~~  300 (488)
                      ..+.+++|+|+|+.|+++  .++.|++||+.+     ++.......+...              +.++.|  ||+.|+++
T Consensus       121 ~~~~~~~~SpdG~~la~~--~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~  198 (706)
T 2z3z_A          121 EETASLDFSPVGDRVAYV--RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFY  198 (706)
T ss_dssp             TCCTTCEECTTSSEEEEE--ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEE
T ss_pred             ccccCCcCCCCCCEEEEE--ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEE
Confidence            346678899999999887  578999999988     7665544444333              367777  79999988


Q ss_pred             e---------------------------------cCCeEEEEECcCCCcccee-eecCCccEEEEEEccCCcEEEEEe-c
Q psy14511        301 T---------------------------------IGGNILHYDVRTHSDYPTA-ITREGDVVCGLKWSPNGRYLASGS-N  345 (488)
Q Consensus       301 ~---------------------------------~dg~i~i~d~~~~~~~~~~-~~~~~~~i~~~~~s~~~~~l~~~~-d  345 (488)
                      +                                 .+..|++||+.++...... ...+...+..++|+|||++|++++ +
T Consensus       199 ~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~  278 (706)
T 2z3z_A          199 RMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVN  278 (706)
T ss_dssp             EEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEEC
T ss_pred             EECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeC
Confidence            7                                 3467999999875421111 124667799999999999998876 4


Q ss_pred             C-----eEEEEECCCCCCCcccc-e---------eeeeecC--CCCEEEEEccCCCCeEEEEeCC-CcceeEEEeecccc
Q psy14511        346 N-----TVKIWDFRQLDAKRPLG-L---------IVPKLKR--EGRELVTSHGKQDCSLKMWEYP-RLHLIEELKIHQER  407 (488)
Q Consensus       346 ~-----~i~iwd~~~~~~~~~~~-~---------~~~~~~~--~~~~l~~~~g~~~~~i~i~d~~-~~~~~~~~~~~~~~  407 (488)
                      +     .|++||+.+++....+. .         ....|+|  ||+++++  +..++.+++|++. +++.+..+..|...
T Consensus       279 ~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~--~~~~g~~~l~~~~~~~~~~~~l~~~~~~  356 (706)
T 2z3z_A          279 RAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQ--SRRDGWNHLYLYDTTGRLIRQVTKGEWE  356 (706)
T ss_dssp             TTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEE--ECTTSSCEEEEEETTSCEEEECCCSSSC
T ss_pred             CCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEE--EccCCccEEEEEECCCCEEEecCCCCeE
Confidence            3     89999998873222221 1         1138999  9998877  6778888888875 67777888888888


Q ss_pred             EEE-EEEcCCCCEEEEEeCC-C----cEEEEecCCCCccccccccCCcceEEeecCCCceEEE
Q psy14511        408 ILS-AVLSPDQTCVAAASAD-E----TISIWNCFPRDKKRKARQVGSGSSLEFAILKQPVSLT  464 (488)
Q Consensus       408 v~~-~~~s~~~~~l~t~~~d-g----~v~iw~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~  464 (488)
                      +.. ++|+||++.|+.++.+ +    .|+.||+.+++.. ...+...+.+++|+|+++.+...
T Consensus       357 v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~spdg~~l~~~  418 (706)
T 2z3z_A          357 VTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTK-DLTPESGMHRTQLSPDGSAIIDI  418 (706)
T ss_dssp             EEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCE-ESCCSSSEEEEEECTTSSEEEEE
T ss_pred             EEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCce-eccCCCceEEEEECCCCCEEEEE
Confidence            877 8999999988766544 4    6777777776643 33466778899999999987654

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.94  E-value=2.4e-24  Score=193.83  Aligned_cols=276  Identities=11%  Similarity=0.069  Sum_probs=182.7

Q ss_pred             ceEEEeecCCeEEEEEcccCcccceeecccCc-eEEEEEEccCCcEEEEe-c-CCeEEEEeccccCcCCCcccccc---c
Q psy14511          6 NLLSCGTIGGNILHYDVRTHSDYPTAITREGD-VVCGLKWSPNGRYLASG-S-NNTVKIWDFRQLDAKRPQVNNQC---H   79 (488)
Q Consensus         6 ~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~-~V~~l~~sp~g~~las~-~-d~~i~vwd~~~~~~~~~~~~~~~---h   79 (488)
                      ++|++++.++.|.+||+.+++.+.....++.. .+..++|+|+|++|+.+ . ++.|.+||+.+++....+. ...   |
T Consensus         2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~   80 (337)
T 1pby_B            2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRID-LSTPEER   80 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEE-CCBTTEE
T ss_pred             cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEE-cCCcccc
Confidence            57899999999999999988755433323322 47889999999876554 4 7899999998765332221 111   2


Q ss_pred             ccceeEEEEecCCCeEEeeeCCc---------ccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEee
Q psy14511         80 LSAVKAIAWCPWEPTLLATGGGI---------CDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHG  150 (488)
Q Consensus        80 ~~~v~~l~~~~~~~~l~~~~~~~---------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (488)
                      ...+..++|+|++++++++....         .++.|.+||+.+++..                                
T Consensus        81 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~--------------------------------  128 (337)
T 1pby_B           81 VKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRR--------------------------------  128 (337)
T ss_dssp             EECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEE--------------------------------
T ss_pred             cccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEE--------------------------------
Confidence            33678899999998887775200         0456666666554432                                


Q ss_pred             eeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCce
Q psy14511        151 FEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKT  230 (488)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~  230 (488)
                                                                                                      
T Consensus       129 --------------------------------------------------------------------------------  128 (337)
T 1pby_B          129 --------------------------------------------------------------------------------  128 (337)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecccc--ccEEEEEecCCEEEEeecC-C---
Q psy14511        231 QLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHM--HQVIAMCWNGNLLSCGTIG-G---  304 (488)
Q Consensus       231 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~--~~v~~~~~~~~~l~~~~~d-g---  304 (488)
                       ..+.    ....+.+++|+|++++++++   ++.|.+||+.+++....+..+.  .++ .+..+++.++..+.. +   
T Consensus       129 -~~~~----~~~~~~~~~~s~dg~~l~~~---~~~i~~~d~~~~~~~~~~~~~~~~~~~-~~s~dg~~l~~~~~~~~~~~  199 (337)
T 1pby_B          129 -KAFE----APRQITMLAWARDGSKLYGL---GRDLHVMDPEAGTLVEDKPIQSWEAET-YAQPDVLAVWNQHESSGVMA  199 (337)
T ss_dssp             -EEEE----CCSSCCCEEECTTSSCEEEE---SSSEEEEETTTTEEEEEECSTTTTTTT-BCCCBCCCCCCCCTTTTEEE
T ss_pred             -EEEe----CCCCcceeEECCCCCEEEEe---CCeEEEEECCCCcEeeeeeccccCCCc-eeCCCccEEeeeccCCCcee
Confidence             2222    11234556677777766666   4567777777666655554322  211 222244433332221 1   


Q ss_pred             --------------------eEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccce
Q psy14511        305 --------------------NILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGL  364 (488)
Q Consensus       305 --------------------~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~  364 (488)
                                          .|.+||+.+++.....+..+...+.+++|+|++++++++ ++.|.+||+.+++....+..
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~v~~~d~~~~~~~~~~~~  278 (337)
T 1pby_B          200 TPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA-YNVLESFDLEKNASIKRVPL  278 (337)
T ss_dssp             EEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE-ESEEEEEETTTTEEEEEEEC
T ss_pred             eeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe-CCeEEEEECCCCcCcceecC
Confidence                                578999988654333445566678899999999999988 79999999988754333321


Q ss_pred             ----eeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccc
Q psy14511        365 ----IVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQE  406 (488)
Q Consensus       365 ----~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~  406 (488)
                          ...+|+|+|+++++  ++.++.|++||+.+++.+..+..+..
T Consensus       279 ~~~~~~~~~s~dg~~l~~--~~~~~~i~v~d~~~~~~~~~~~~~~~  322 (337)
T 1pby_B          279 PHSYYSVNVSTDGSTVWL--GGALGDLAAYDAETLEKKGQVDLPGN  322 (337)
T ss_dssp             SSCCCEEEECTTSCEEEE--ESBSSEEEEEETTTCCEEEEEECGGG
T ss_pred             CCceeeEEECCCCCEEEE--EcCCCcEEEEECcCCcEEEEEEcCCC
Confidence                12289999999988  46689999999999998888876543

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.92  E-value=1.8e-23  Score=184.40  Aligned_cols=243  Identities=13%  Similarity=0.128  Sum_probs=181.4

Q ss_pred             ECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCc-ceeeeeeccc-cccEEEEEe
Q psy14511        215 ALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE-ERLIQKLRTH-MHQVIAMCW  292 (488)
Q Consensus       215 ~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~-~~~~~~~~~~-~~~v~~~~~  292 (488)
                      +.++.|++||+.+++......    +...+.+++|+|++++++++ + ++.|++||+.+ ++.......+ ...+.+++|
T Consensus        19 ~~~~~i~~~d~~~~~~~~~~~----~~~~v~~~~~spdg~~l~~~-~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~   92 (297)
T 2ojh_A           19 SMRSSIEIFNIRTRKMRVVWQ----TPELFEAPNWSPDGKYLLLN-S-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGI   92 (297)
T ss_dssp             CCCEEEEEEETTTTEEEEEEE----ESSCCEEEEECTTSSEEEEE-E-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEE
T ss_pred             CcceeEEEEeCCCCceeeecc----CCcceEeeEECCCCCEEEEE-c-CCeEEEEeCCCCCCceEeccccccccccceEE
Confidence            368899999999988765554    66789999999999999988 4 78999999998 7776666555 366777788


Q ss_pred             --cCCEEEEee--cCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEE-EEe-cCeEEEEECC--CCCCCcccc-
Q psy14511        293 --NGNLLSCGT--IGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLA-SGS-NNTVKIWDFR--QLDAKRPLG-  363 (488)
Q Consensus       293 --~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~-d~~i~iwd~~--~~~~~~~~~-  363 (488)
                        +++.+++++  .++...+|.+.........+..+. .+..++|+|++++|+ ++. ++.+++|++.  +.+...... 
T Consensus        93 spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~  171 (297)
T 2ojh_A           93 SPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHG  171 (297)
T ss_dssp             CTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCS
T ss_pred             CCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccC
Confidence              789999988  334455554432222344444443 488899999999888 444 5888999864  332211111 


Q ss_pred             ---eeeeeecCCCCEEEEEccCCCCeEEEEeCC-CcceeEEEeeccccEEEEEEcCCCCEEEEEeCC-----------Cc
Q psy14511        364 ---LIVPKLKREGRELVTSHGKQDCSLKMWEYP-RLHLIEELKIHQERILSAVLSPDQTCVAAASAD-----------ET  428 (488)
Q Consensus       364 ---~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~-~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~d-----------g~  428 (488)
                         .....|+|+++.++++ +..++.+++|++. .+..+..+..|...+..++|+|++++|++++.+           +.
T Consensus       172 ~~~~~~~~~s~dg~~l~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~  250 (297)
T 2ojh_A          172 EGRNDGPDYSPDGRWIYFN-SSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVR  250 (297)
T ss_dssp             SSCEEEEEECTTSSEEEEE-ECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEE
T ss_pred             CCccccceECCCCCEEEEE-ecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceE
Confidence               1123899999998875 4457889999885 566677888888899999999999999998876           56


Q ss_pred             EEEEecCCCCcccc---ccccCCcceEEeecCCCceEEEE
Q psy14511        429 ISIWNCFPRDKKRK---ARQVGSGSSLEFAILKQPVSLTA  465 (488)
Q Consensus       429 v~iw~~~~~~~~~~---~~~~~~v~~~~~s~~~~~~~~~~  465 (488)
                      |++||+.+++....   ..+...+..+.|+|+++.+....
T Consensus       251 l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~  290 (297)
T 2ojh_A          251 VQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVR  290 (297)
T ss_dssp             EEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEE
T ss_pred             EEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEE
Confidence            99999998876533   35678899999999999886554

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.92  E-value=2.2e-22  Score=182.23  Aligned_cols=219  Identities=11%  Similarity=0.079  Sum_probs=170.3

Q ss_pred             eEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccc---------cEEEEEe--cCCEEEEee--cCCeEEEEE
Q psy14511        244 ISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMH---------QVIAMCW--NGNLLSCGT--IGGNILHYD  310 (488)
Q Consensus       244 i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~---------~v~~~~~--~~~~l~~~~--~dg~i~i~d  310 (488)
                      +..++|+|++++++++...++.|.+||..+++.+..+..+..         .+.++.+  +++.+++++  .++.|.+||
T Consensus        91 ~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d  170 (353)
T 3vgz_A           91 PFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVD  170 (353)
T ss_dssp             CCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEE
T ss_pred             cceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEc
Confidence            557899999998777757789999999999888877765432         2567777  677777665  478999999


Q ss_pred             CcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccce-------e--eeeecCCCCEEEEEc
Q psy14511        311 VRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGL-------I--VPKLKREGRELVTSH  380 (488)
Q Consensus       311 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~-------~--~~~~~~~~~~l~~~~  380 (488)
                      ..+.+ ....+..+...+..++|+|+++++++++ ++.+.+||+.+++....+..       .  ..+|+|+++.++++ 
T Consensus       171 ~~~~~-~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-  248 (353)
T 3vgz_A          171 GGNIK-LKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFIT-  248 (353)
T ss_dssp             TTTTE-EEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEE-
T ss_pred             CCCCc-eEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEE-
Confidence            98753 4455554555578899999999999888 59999999998765443322       1  13899999988775 


Q ss_pred             cCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEe-CCCcEEEEecCCCCccccccccCCcceEEeecCCC
Q psy14511        381 GKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAAS-ADETISIWNCFPRDKKRKARQVGSGSSLEFAILKQ  459 (488)
Q Consensus       381 g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~-~dg~v~iw~~~~~~~~~~~~~~~~v~~~~~s~~~~  459 (488)
                      ...++.|.+||..+++.+..+.....  ..++|+||+++++.++ .++.|.+||+.+++..........+.+++|+|+++
T Consensus       249 ~~~~~~v~~~d~~~~~~~~~~~~~~~--~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~  326 (353)
T 3vgz_A          249 DSKAAEVLVVDTRNGNILAKVAAPES--LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGK  326 (353)
T ss_dssp             ESSSSEEEEEETTTCCEEEEEECSSC--CCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCSEEEEEEECTTSC
T ss_pred             eCCCCEEEEEECCCCcEEEEEEcCCC--ceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCCCCCeEEEcCCCC
Confidence            45679999999999998887775432  5799999999666555 68999999999998876666666789999999999


Q ss_pred             ceEEEEe
Q psy14511        460 PVSLTAL  466 (488)
Q Consensus       460 ~~~~~~~  466 (488)
                      .+.....
T Consensus       327 ~l~v~~~  333 (353)
T 3vgz_A          327 TLYVSVK  333 (353)
T ss_dssp             EEEEEEE
T ss_pred             EEEEEEc
Confidence            7765543

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.92  E-value=3.1e-22  Score=180.69  Aligned_cols=290  Identities=12%  Similarity=0.130  Sum_probs=182.2

Q ss_pred             eEEEee----cCCeEEEEEccc--CcccceeecccCceEEEEEEccCCcEEEEec---CCeEEEEeccccCcCCCccccc
Q psy14511          7 LLSCGT----IGGNILHYDVRT--HSDYPTAITREGDVVCGLKWSPNGRYLASGS---NNTVKIWDFRQLDAKRPQVNNQ   77 (488)
Q Consensus         7 ~la~g~----~dg~i~iwd~~~--~~~~~~~~~~h~~~V~~l~~sp~g~~las~~---d~~i~vwd~~~~~~~~~~~~~~   77 (488)
                      .+++|+    .++.|.+|+++.  ++........+...+..++|+|||++++++.   ++.|.+||+.+++ .+.+..+.
T Consensus         4 ~~~vg~y~~~~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~-~~~~~~~~   82 (347)
T 3hfq_A            4 RILFGTYTKKTSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQT-AHKLNTVV   82 (347)
T ss_dssp             EEEEEECCSSSCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTE-EEEEEEEE
T ss_pred             EEEEEeccCCCCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecCCCceEEEEEecCCc-EEEeeeee
Confidence            455553    355688887764  4322223345566788899999999444443   5899999997543 22333345


Q ss_pred             ccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccc
Q psy14511         78 CHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKK  157 (488)
Q Consensus        78 ~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (488)
                      .+...+..++|+||+++|++++..  ++.+.+|++........+...                                 
T Consensus        83 ~~~~~p~~~a~spdg~~l~~~~~~--~~~v~v~~~~~~g~~~~~~~~---------------------------------  127 (347)
T 3hfq_A           83 APGTPPAYVAVDEARQLVYSANYH--KGTAEVMKIAADGALTLTDTV---------------------------------  127 (347)
T ss_dssp             EESCCCSEEEEETTTTEEEEEETT--TTEEEEEEECTTSCEEEEEEE---------------------------------
T ss_pred             cCCCCCEEEEECCCCCEEEEEeCC--CCEEEEEEeCCCCCeeeccee---------------------------------
Confidence            567789999999999988888853  899999998532111111000                                 


Q ss_pred             eeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecC
Q psy14511        158 VLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYP  237 (488)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~  237 (488)
                                                                                        .......    ...
T Consensus       128 ------------------------------------------------------------------~~~~~~p----~~~  137 (347)
T 3hfq_A          128 ------------------------------------------------------------------QHSGHGP----RPE  137 (347)
T ss_dssp             ------------------------------------------------------------------ECCCCCS----STT
T ss_pred             ------------------------------------------------------------------ecCCCCC----Ccc
Confidence                                                                              0000000    000


Q ss_pred             CCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECC-cceee--eeeccc-cccEEEEEe--cCCEEEE-eecCCeEEEEE
Q psy14511        238 TYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQ-EERLI--QKLRTH-MHQVIAMCW--NGNLLSC-GTIGGNILHYD  310 (488)
Q Consensus       238 ~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~-~~~~~--~~~~~~-~~~v~~~~~--~~~~l~~-~~~dg~i~i~d  310 (488)
                      . ....+.+++|+|+++ ++++...++.|.+|++. +++..  ..+..+ ......++|  +|+++++ ...++.+.+|+
T Consensus       138 ~-~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~  215 (347)
T 3hfq_A          138 Q-DGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLK  215 (347)
T ss_dssp             C-SSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred             c-cCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEE
Confidence            0 344688999999999 55554778899999998 44322  222222 235666777  7885555 56788999999


Q ss_pred             CcCCC-cc--ceeeecCC------ccEEEEEEccCCcEEEEEe--cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEE
Q psy14511        311 VRTHS-DY--PTAITREG------DVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTS  379 (488)
Q Consensus       311 ~~~~~-~~--~~~~~~~~------~~i~~~~~s~~~~~l~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~  379 (488)
                      +.... ..  ...+....      ..+..++|+|||++|+++.  ++.|.+|++...                       
T Consensus       216 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~-----------------------  272 (347)
T 3hfq_A          216 YDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTAD-----------------------  272 (347)
T ss_dssp             EETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGG-----------------------
T ss_pred             ecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCC-----------------------
Confidence            87521 11  11222221      3478899999999875544  377777776521                       


Q ss_pred             ccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCC-CcEEEEec--CCCCcc
Q psy14511        380 HGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASAD-ETISIWNC--FPRDKK  440 (488)
Q Consensus       380 ~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~d-g~v~iw~~--~~~~~~  440 (488)
                       |            +.+.+..+..+...+..++|+|||++|++++.+ +.|.+|++  .+++..
T Consensus       273 -g------------~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~  323 (347)
T 3hfq_A          273 -G------------HLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS  323 (347)
T ss_dssp             -G------------CEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred             -C------------cEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence             0            112344455555668899999999999888765 89999955  455544

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.92  E-value=2.4e-23  Score=206.86  Aligned_cols=312  Identities=13%  Similarity=0.081  Sum_probs=196.6

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccceeecccCc---eEEEEEEccCCcEEEEecC----------CeEEEEeccccCcC
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGD---VVCGLKWSPNGRYLASGSN----------NTVKIWDFRQLDAK   70 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~---~V~~l~~sp~g~~las~~d----------~~i~vwd~~~~~~~   70 (488)
                      ||++++++ .|+.|++||+.+++.. ..+.+|..   .|.+++|||||++||++++          +.|++||+.+++..
T Consensus        26 dg~~~~~~-~d~~i~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~  103 (719)
T 1z68_A           26 GQEYLHQS-ADNNIVLYNIETGQSY-TILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFV  103 (719)
T ss_dssp             SSEEEEEC-TTSCEEEEESSSCCEE-EEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC
T ss_pred             CCeEEEEc-CCCCEEEEEcCCCcEE-EEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccc
Confidence            88766665 5999999999988743 44555543   3899999999999998863          89999999886542


Q ss_pred             CCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEee
Q psy14511         71 RPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHG  150 (488)
Q Consensus        71 ~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (488)
                      ... .+   ...+..++|+|||+.|+++.    ++.|++|++.+++..........                        
T Consensus       104 ~~~-~l---~~~~~~~~~SPDG~~la~~~----~~~i~~~~~~~g~~~~l~~~~~~------------------------  151 (719)
T 1z68_A          104 RGN-EL---PRPIQYLCWSPVGSKLAYVY----QNNIYLKQRPGDPPFQITFNGRE------------------------  151 (719)
T ss_dssp             CSS-CC---CSSBCCEEECSSTTCEEEEE----TTEEEEESSTTSCCEECCCCCBT------------------------
T ss_pred             cce-ec---CcccccceECCCCCEEEEEE----CCeEEEEeCCCCCcEEEecCCCc------------------------
Confidence            101 11   24688999999999877764    88999999988765322111100                        


Q ss_pred             eeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCce
Q psy14511        151 FEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKT  230 (488)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~  230 (488)
                                                                                ..+           ++   +..
T Consensus       152 ----------------------------------------------------------~~v-----------~~---g~~  159 (719)
T 1z68_A          152 ----------------------------------------------------------NKI-----------FN---GIP  159 (719)
T ss_dssp             ----------------------------------------------------------TTE-----------EE---SSC
T ss_pred             ----------------------------------------------------------CCe-----------Ec---ccc
Confidence                                                                      000           00   000


Q ss_pred             EEEEecCCCCCCceEEEEEcCCCCeEEEEeCCC----------------------------------CcEEEEECCccee
Q psy14511        231 QLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCT----------------------------------EYIDLWHEQEERL  276 (488)
Q Consensus       231 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~----------------------------------~~i~i~d~~~~~~  276 (488)
                      ..+.+.+  ......+++|+|||+.|+++ +.+                                  ..|++||+.+++.
T Consensus       160 ~~v~~ee--~~~~~~~~~wSPDG~~la~~-~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~  236 (719)
T 1z68_A          160 DWVYEEE--MLATKYALWWSPNGKFLAYA-EFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAY  236 (719)
T ss_dssp             CHHHHHH--TTCSSCCEEECTTSSEEEEE-EEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHH
T ss_pred             cceeeee--cccCcccEEECCCCCEEEEE-EECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCc
Confidence            0000000  01122467788888777776 332                                  2788999988764


Q ss_pred             e--------eeeccccccEEEEEe--cCCEEEEeecC----CeEEEEE----CcCCCccceee----ecCCccEE-----
Q psy14511        277 I--------QKLRTHMHQVIAMCW--NGNLLSCGTIG----GNILHYD----VRTHSDYPTAI----TREGDVVC-----  329 (488)
Q Consensus       277 ~--------~~~~~~~~~v~~~~~--~~~~l~~~~~d----g~i~i~d----~~~~~~~~~~~----~~~~~~i~-----  329 (488)
                      .        ..+.+|...+..++|  |++++++....    ..|.+||    +.+++ .....    ..|...+.     
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~  315 (719)
T 1z68_A          237 VGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWD-CPKTQEHIEESRTGWAGGFFVS  315 (719)
T ss_dssp             HCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEE-CCGGGEEEEECSSSCSSSSSCC
T ss_pred             cceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCc-eEEEEecccccCCceEccccCC
Confidence            2        223467888999999  66666664433    2488899    66543 33333    35555555     


Q ss_pred             EEEEccCCcEEEEE-e--cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccc
Q psy14511        330 GLKWSPNGRYLASG-S--NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQE  406 (488)
Q Consensus       330 ~~~~s~~~~~l~~~-~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~  406 (488)
                      .++|+|||+.|+.. +  ++.                                     ..|++||+.+++ ...+..+..
T Consensus       316 ~~~~spdg~~l~~~~~~~~g~-------------------------------------~~l~~~~~~~~~-~~~lt~~~~  357 (719)
T 1z68_A          316 TPVFSYDAISYYKIFSDKDGY-------------------------------------KHIHYIKDTVEN-AIQITSGKW  357 (719)
T ss_dssp             CCEECTTSSCEEEEEECTTSC-------------------------------------EEEEEESSCSTT-CEECSCSSS
T ss_pred             ccEECCCCCeEEEEEEccCCc-------------------------------------eEEEEEECCCCc-eEecccCce
Confidence            77899998866542 2  121                                     234444544444 344555555


Q ss_pred             cEEEEEEcCCCCEEEEEeCC-----CcEEEEecCC--CC--ccccc----cccCCcceEEeecCCCceEEE
Q psy14511        407 RILSAVLSPDQTCVAAASAD-----ETISIWNCFP--RD--KKRKA----RQVGSGSSLEFAILKQPVSLT  464 (488)
Q Consensus       407 ~v~~~~~s~~~~~l~t~~~d-----g~v~iw~~~~--~~--~~~~~----~~~~~v~~~~~s~~~~~~~~~  464 (488)
                      .+..+.++ +++.|+..+.+     +..++|.+..  +.  ...+.    .+...+..+.|+|+++.+.+.
T Consensus       358 ~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~  427 (719)
T 1z68_A          358 EAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALV  427 (719)
T ss_dssp             CEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEE
T ss_pred             EEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEE
Confidence            67777777 88877776655     8889998864  32  12221    144567789999999987654

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.92  E-value=1.1e-23  Score=209.67  Aligned_cols=305  Identities=12%  Similarity=0.081  Sum_probs=201.3

Q ss_pred             eEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCccccccccc---ceeEEEEecCCCeEEeeeCCcccceEEEEecCC
Q psy14511         38 VVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLS---AVKAIAWCPWEPTLLATGGGICDQTVRLWNSMN  114 (488)
Q Consensus        38 ~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~---~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~  114 (488)
                      .+.+++|+|||++++++.|+.|++||+.+++...   .+.+|..   .|.+++|+|||++|+++..   ++.+.  .   
T Consensus        18 ~~~~~~~spdg~~~~~~~dg~i~~~d~~~g~~~~---~~~~~~~~~~~v~~~~~SpDg~~l~~~~~---~~~~~--~---   86 (723)
T 1xfd_A           18 HDPEAKWISDTEFIYREQKGTVRLWNVETNTSTV---LIEGKKIESLRAIRYEISPDREYALFSYN---VEPIY--Q---   86 (723)
T ss_dssp             CCCCCCBSSSSCBCCCCSSSCEEEBCGGGCCCEE---EECTTTTTTTTCSEEEECTTSSEEEEEES---CCCCS--S---
T ss_pred             cccccEEcCCCcEEEEeCCCCEEEEECCCCcEEE---EeccccccccccceEEECCCCCEEEEEec---Cccce--e---
Confidence            4678999999998887559999999999865432   2344543   4999999999998888765   32110  0   


Q ss_pred             CeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCC
Q psy14511        115 GKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPS  194 (488)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (488)
                      .                                                                               
T Consensus        87 ~-------------------------------------------------------------------------------   87 (723)
T 1xfd_A           87 H-------------------------------------------------------------------------------   87 (723)
T ss_dssp             S-------------------------------------------------------------------------------
T ss_pred             e-------------------------------------------------------------------------------
Confidence            0                                                                               


Q ss_pred             ccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcc
Q psy14511        195 IINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEE  274 (488)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~  274 (488)
                                          +.++.+++||+.+++...+....+ +...+..++|+|||+.|+++ + ++.|++||+.++
T Consensus        88 --------------------~~~~~i~~~d~~~~~~~~l~~~~~-~~~~~~~~~~SPdG~~la~~-~-~~~i~~~~~~~g  144 (723)
T 1xfd_A           88 --------------------SYTGYYVLSKIPHGDPQSLDPPEV-SNAKLQYAGWGPKGQQLIFI-F-ENNIYYCAHVGK  144 (723)
T ss_dssp             --------------------CCCSEEEEEESSSCCCEECCCTTC-CSCCCSBCCBCSSTTCEEEE-E-TTEEEEESSSSS
T ss_pred             --------------------cceeeEEEEECCCCceEeccCCcc-ccccccccEECCCCCEEEEE-E-CCeEEEEECCCC
Confidence                                012334444444443321111111 44457789999999999998 4 379999999987


Q ss_pred             eeeeeeccccccE------------------EEEEe--cCCEEEEeecC-CeEEEEECcCCCccceeeecCCccEEEEEE
Q psy14511        275 RLIQKLRTHMHQV------------------IAMCW--NGNLLSCGTIG-GNILHYDVRTHSDYPTAITREGDVVCGLKW  333 (488)
Q Consensus       275 ~~~~~~~~~~~~v------------------~~~~~--~~~~l~~~~~d-g~i~i~d~~~~~~~~~~~~~~~~~i~~~~~  333 (488)
                      +.......+...+                  .++.|  ||+.|++++.+ +.+.+|++......      +...+..+.|
T Consensus       145 ~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~  218 (723)
T 1xfd_A          145 QAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGS------IYPTVKPYHY  218 (723)
T ss_dssp             CCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSS------SSCCCEEEEC
T ss_pred             ceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCc------CCCcceeccC
Confidence            7666555433322                  66777  78888888755 46777877543211      2234778899


Q ss_pred             ccCCcEEEEEecCeEEEEECCCCCCCcccce---------e--eeeecCCCCEEEEEcc--CCCCeEEEEeCCCcceeEE
Q psy14511        334 SPNGRYLASGSNNTVKIWDFRQLDAKRPLGL---------I--VPKLKREGRELVTSHG--KQDCSLKMWEYPRLHLIEE  400 (488)
Q Consensus       334 s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~---------~--~~~~~~~~~~l~~~~g--~~~~~i~i~d~~~~~~~~~  400 (488)
                      +++|..   ..+..|++||+.+++....+..         .  ...|+|||+.+++...  ..+..|++||+.+++....
T Consensus       219 ~~~G~~---~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~  295 (723)
T 1xfd_A          219 PKAGSE---NPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKK  295 (723)
T ss_dssp             CBTTSC---CCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEE
T ss_pred             CCCCCC---CCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEE
Confidence            988863   1236899999988764332221         1  2389999998876432  2446899999999987766


Q ss_pred             Eeec-cccE----EEEEEcCCCCEEEEE--eCCC------cEEEEe-cCCCC---ccccccccCCcce-EEeecCCCceE
Q psy14511        401 LKIH-QERI----LSAVLSPDQTCVAAA--SADE------TISIWN-CFPRD---KKRKARQVGSGSS-LEFAILKQPVS  462 (488)
Q Consensus       401 ~~~~-~~~v----~~~~~s~~~~~l~t~--~~dg------~v~iw~-~~~~~---~~~~~~~~~~v~~-~~~s~~~~~~~  462 (488)
                      +..+ ...+    ..++|||||+.|+..  ..|+      .|++|| ..+++   ...+......+.. ++|+||++.+.
T Consensus       296 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~  375 (723)
T 1xfd_A          296 HEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIY  375 (723)
T ss_dssp             EEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEE
T ss_pred             EEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEE
Confidence            6543 3334    378999999987754  4667      577777 44554   3333333444544 68999999886


Q ss_pred             EE
Q psy14511        463 LT  464 (488)
Q Consensus       463 ~~  464 (488)
                      +.
T Consensus       376 ~~  377 (723)
T 1xfd_A          376 FL  377 (723)
T ss_dssp             EE
T ss_pred             EE
Confidence            54

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.91  E-value=1.2e-21  Score=177.86  Aligned_cols=307  Identities=12%  Similarity=0.104  Sum_probs=190.5

Q ss_pred             ceEEEee----cCCeEEEEEccc--CcccceeecccCceEEEEEEccCCcEEEEec-C----CeEEEEecccc-CcCCCc
Q psy14511          6 NLLSCGT----IGGNILHYDVRT--HSDYPTAITREGDVVCGLKWSPNGRYLASGS-N----NTVKIWDFRQL-DAKRPQ   73 (488)
Q Consensus         6 ~~la~g~----~dg~i~iwd~~~--~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d----~~i~vwd~~~~-~~~~~~   73 (488)
                      .++.+|+    .++.|.+|++..  ++....... +...+..++|+|||++|++++ +    +.|.+|++... .....+
T Consensus        14 ~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~   92 (361)
T 3scy_A           14 LTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA-EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLL   92 (361)
T ss_dssp             EEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE-ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEE
T ss_pred             eEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc-cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEe
Confidence            4556664    356899997753  432222222 677788899999999999887 4    79999998752 112233


Q ss_pred             ccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeec
Q psy14511         74 VNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEI  153 (488)
Q Consensus        74 ~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (488)
                      .....+......+++  ++++++++...  ++.+.+|++.....+......                             
T Consensus        93 ~~~~~~~~~p~~~~~--dg~~l~~~~~~--~~~v~~~~~~~~g~~~~~~~~-----------------------------  139 (361)
T 3scy_A           93 NTQKTMGADPCYLTT--NGKNIVTANYS--GGSITVFPIGQDGALLPASDV-----------------------------  139 (361)
T ss_dssp             EEEECSSSCEEEEEE--CSSEEEEEETT--TTEEEEEEBCTTSCBCSCSEE-----------------------------
T ss_pred             eEeccCCCCcEEEEE--CCCEEEEEECC--CCEEEEEEeCCCCcCccccee-----------------------------
Confidence            333334456777777  78888888764  899999999754322111000                             


Q ss_pred             cccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEE
Q psy14511        154 DRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLL  233 (488)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~  233 (488)
                           ....                                                               ..+.    
T Consensus       140 -----~~~~---------------------------------------------------------------g~~~----  147 (361)
T 3scy_A          140 -----IEFK---------------------------------------------------------------GSGP----  147 (361)
T ss_dssp             -----EECC---------------------------------------------------------------CCCS----
T ss_pred             -----EEcc---------------------------------------------------------------CCCC----
Confidence                 0000                                                               0000    


Q ss_pred             EecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCccee------e-------eeeccccccEEEEEe--cCCEEE
Q psy14511        234 VEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERL------I-------QKLRTHMHQVIAMCW--NGNLLS  298 (488)
Q Consensus       234 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~------~-------~~~~~~~~~v~~~~~--~~~~l~  298 (488)
                      ..... +...+.+++|+|+|+++++++..++.|.+|++.....      +       .....+......++|  ++++++
T Consensus       148 ~~~~~-~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~  226 (361)
T 3scy_A          148 DKERQ-TMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAY  226 (361)
T ss_dssp             CTTTC-SSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEE
T ss_pred             Ccccc-CCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEE
Confidence            00000 3345788999999998887756789999998875331      1       112223445677888  788777


Q ss_pred             Eee-cCCeEEEEECcCCCc-cceee---ecCCccEEEEEEccCCcEEEEEe-c--CeEEEEECCCCCCCcccceeeeeec
Q psy14511        299 CGT-IGGNILHYDVRTHSD-YPTAI---TREGDVVCGLKWSPNGRYLASGS-N--NTVKIWDFRQLDAKRPLGLIVPKLK  370 (488)
Q Consensus       299 ~~~-~dg~i~i~d~~~~~~-~~~~~---~~~~~~i~~~~~s~~~~~l~~~~-d--~~i~iwd~~~~~~~~~~~~~~~~~~  370 (488)
                      +++ .++.|.+|++.++.. ....+   ..+......++|+|||++|+++. +  +.|.+|++...              
T Consensus       227 v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~--------------  292 (361)
T 3scy_A          227 LINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDET--------------  292 (361)
T ss_dssp             EEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTT--------------
T ss_pred             EEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCC--------------
Confidence            766 689999999985431 11112   22334467899999999887664 3  56777766421              


Q ss_pred             CCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEe-CCCcEEEEecC--CCCcccc--ccc
Q psy14511        371 REGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAAS-ADETISIWNCF--PRDKKRK--ARQ  445 (488)
Q Consensus       371 ~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~-~dg~v~iw~~~--~~~~~~~--~~~  445 (488)
                                   ++.        .+.+..+.. ...+..++|+|||++|++++ .++.|.+|+++  +++....  ..+
T Consensus       293 -------------~g~--------~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~  350 (361)
T 3scy_A          293 -------------NGT--------LTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIK  350 (361)
T ss_dssp             -------------TCC--------EEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEE
T ss_pred             -------------CCc--------EEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeee
Confidence                         111        112333333 34678899999999998887 67899996554  5555432  224


Q ss_pred             cCCcceEEee
Q psy14511        446 VGSGSSLEFA  455 (488)
Q Consensus       446 ~~~v~~~~~s  455 (488)
                      ...+.++.|.
T Consensus       351 ~~~p~~v~~~  360 (361)
T 3scy_A          351 VDKPVCLKFV  360 (361)
T ss_dssp             CSSEEEEEEE
T ss_pred             CCCCeEEEEc
Confidence            4566777775

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.91  E-value=3.5e-22  Score=179.67  Aligned_cols=262  Identities=13%  Similarity=0.042  Sum_probs=193.0

Q ss_pred             cEEEEECCCeEEEEECCCCceEEEEecCCCCCC-ceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccc-----
Q psy14511        210 DTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNA-YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTH-----  283 (488)
Q Consensus       210 ~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~-----  283 (488)
                      .+++++.++.|++||..+++....+...  +.. .+..++|+|+++.+++++..++.|.+||+.+++.+..+...     
T Consensus         3 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~--~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~   80 (337)
T 1pby_B            3 YILAPARPDKLVVIDTEKMAVDKVITIA--DAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEER   80 (337)
T ss_dssp             EEEEEETTTEEEEEETTTTEEEEEEECT--TCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEE
T ss_pred             EEEEcCCCCeEEEEECCCCcEEEEEEcC--CCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccc
Confidence            3677789999999999999887776643  211 47889999999888776577899999999998877766531     


Q ss_pred             cccEEEEEe--cCCEEEEee------------cCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeEE
Q psy14511        284 MHQVIAMCW--NGNLLSCGT------------IGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVK  349 (488)
Q Consensus       284 ~~~v~~~~~--~~~~l~~~~------------~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~  349 (488)
                      ...+..+++  +++.++++.            .++.|.+||+.+++ ....+.. ...+..++|+|++++|+++ ++.|.
T Consensus        81 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~-~~~~~~~-~~~~~~~~~s~dg~~l~~~-~~~i~  157 (337)
T 1pby_B           81 VKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLS-RRKAFEA-PRQITMLAWARDGSKLYGL-GRDLH  157 (337)
T ss_dssp             EECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTE-EEEEEEC-CSSCCCEEECTTSSCEEEE-SSSEE
T ss_pred             cccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCc-EEEEEeC-CCCcceeEECCCCCEEEEe-CCeEE
Confidence            124455666  688888876            57999999998753 3334433 3457789999999988887 78999


Q ss_pred             EEECCCCCCCccccee----eeeecCCCCEEEEEccCCCC-----------------------eEEEEeCCCccee-EEE
Q psy14511        350 IWDFRQLDAKRPLGLI----VPKLKREGRELVTSHGKQDC-----------------------SLKMWEYPRLHLI-EEL  401 (488)
Q Consensus       350 iwd~~~~~~~~~~~~~----~~~~~~~~~~l~~~~g~~~~-----------------------~i~i~d~~~~~~~-~~~  401 (488)
                      +||+.+++....+...    ...|+|+++.+++. +..++                       .|.+||+.+++.. ..+
T Consensus       158 ~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~  236 (337)
T 1pby_B          158 VMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQ-HESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREV  236 (337)
T ss_dssp             EEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCC-CTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEE
T ss_pred             EEECCCCcEeeeeeccccCCCceeCCCccEEeee-ccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeec
Confidence            9999887544322211    22889999887663 22333                       4789999998764 234


Q ss_pred             eeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccccccccCCcceEEeecCCCceEEEEeeecccccceeeEEEE
Q psy14511        402 KIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKARQVGSGSSLEFAILKQPVSLTALLRSRAVEKQQHAIAY  481 (488)
Q Consensus       402 ~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~  481 (488)
                      ..+...+.+++|+||+++|+++  ++.|++||+.+++..........+.+++|+|+++.+...       ..+..+.++.
T Consensus       237 ~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-------~~~~~i~v~d  307 (337)
T 1pby_B          237 RIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLG-------GALGDLAAYD  307 (337)
T ss_dssp             EECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEE-------SBSSEEEEEE
T ss_pred             CCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCCCceeeEEECCCCCEEEEE-------cCCCcEEEEE
Confidence            4566678899999999999988  799999999998877665566778999999999876442       2234555565


Q ss_pred             eeccc
Q psy14511        482 TVFGE  486 (488)
Q Consensus       482 ~~~g~  486 (488)
                      .++|+
T Consensus       308 ~~~~~  312 (337)
T 1pby_B          308 AETLE  312 (337)
T ss_dssp             TTTCC
T ss_pred             CcCCc
Confidence            55554

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.91  E-value=1.5e-21  Score=175.11  Aligned_cols=245  Identities=11%  Similarity=0.061  Sum_probs=179.9

Q ss_pred             EEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCccee-eeeeccccccEEE
Q psy14511        211 TLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERL-IQKLRTHMHQVIA  289 (488)
Q Consensus       211 ~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~-~~~~~~~~~~v~~  289 (488)
                      +++...++.|.+||..+++.......   +...+ .++|+|+++++++++..++.|.+||..+++. ...+..+..+..+
T Consensus        13 ~v~~~~~~~v~~~d~~~~~~~~~~~~---~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~   88 (331)
T 3u4y_A           13 IVVEQHLRRISFFSTDTLEILNQITL---GYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMAD   88 (331)
T ss_dssp             EEEEGGGTEEEEEETTTCCEEEEEEC---CCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCC
T ss_pred             EEEecCCCeEEEEeCcccceeeeEEc---cCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccc
Confidence            44455889999999999988777664   44556 9999999998888756689999999998887 6666666666554


Q ss_pred             EEe--cCCEEEEeecCC---eEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-c-Ce-EEEEECCCCCCCcc
Q psy14511        290 MCW--NGNLLSCGTIGG---NILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-N-NT-VKIWDFRQLDAKRP  361 (488)
Q Consensus       290 ~~~--~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d-~~-i~iwd~~~~~~~~~  361 (488)
                      +++  ++++++++..++   .|.+||+.+++ ....+..+ .....++|+|+|+++++++ + +. +.+|++........
T Consensus        89 ~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~-~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~  166 (331)
T 3u4y_A           89 VDITPDDQFAVTVTGLNHPFNMQSYSFLKNK-FISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFD  166 (331)
T ss_dssp             EEECTTSSEEEECCCSSSSCEEEEEETTTTE-EEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEE
T ss_pred             eEECCCCCEEEEecCCCCcccEEEEECCCCC-eEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEee
Confidence            676  788888665553   89999998754 44444443 3468999999998666654 4 77 99999875432111


Q ss_pred             c---------ceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcce---eEEEeeccccEEEEEEcCCCCEEEEEe-CCCc
Q psy14511        362 L---------GLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHL---IEELKIHQERILSAVLSPDQTCVAAAS-ADET  428 (488)
Q Consensus       362 ~---------~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~---~~~~~~~~~~v~~~~~s~~~~~l~t~~-~dg~  428 (488)
                      .         .....+|+|+|++++++ +..++.|++||+.+++.   +..+..+ ..+..++|+|||++|+.++ .++.
T Consensus       167 ~~~~~~~~~~~~~~~~~spdg~~l~v~-~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~~~~~  244 (331)
T 3u4y_A          167 TGQEFISGGTRPFNITFTPDGNFAFVA-NLIGNSIGILETQNPENITLLNAVGTN-NLPGTIVVSRDGSTVYVLTESTVD  244 (331)
T ss_dssp             EEEEEECSSSSEEEEEECTTSSEEEEE-ETTTTEEEEEECSSTTSCEEEEEEECS-SCCCCEEECTTSSEEEEECSSEEE
T ss_pred             cCCccccCCCCccceEECCCCCEEEEE-eCCCCeEEEEECCCCcccceeeeccCC-CCCceEEECCCCCEEEEEEcCCCE
Confidence            1         01122899999987765 56789999999999988   7777644 5678999999999776655 5788


Q ss_pred             EEEEecCCCCcccc----------ccccCCcceEEeecCCCceEE
Q psy14511        429 ISIWNCFPRDKKRK----------ARQVGSGSSLEFAILKQPVSL  463 (488)
Q Consensus       429 v~iw~~~~~~~~~~----------~~~~~~v~~~~~s~~~~~~~~  463 (488)
                      |.+||+.+++....          .........++|+|+++.+..
T Consensus       245 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v  289 (331)
T 3u4y_A          245 VFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFI  289 (331)
T ss_dssp             EEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEE
T ss_pred             EEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEE
Confidence            99999998876211          111122355899999998744

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.90  E-value=2.6e-21  Score=187.19  Aligned_cols=181  Identities=12%  Similarity=0.025  Sum_probs=132.2

Q ss_pred             eEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEecCCEEEEeecC----CeEEEEECcCCCccce
Q psy14511        244 ISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIG----GNILHYDVRTHSDYPT  319 (488)
Q Consensus       244 i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~  319 (488)
                      ....+|+|+++.++..+..++.+.+||+.+++.......+. .-..++.||+.+++++.+    +.|++||+.+++  ..
T Consensus       112 ~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~-~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~--~~  188 (582)
T 3o4h_A          112 MRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG-FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGG--LR  188 (582)
T ss_dssp             BEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS-CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCC--CE
T ss_pred             ceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC-ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCC--ce
Confidence            33567888886544332555666699998876655544333 333344489999988877    789999998754  44


Q ss_pred             eeecCCccEEEEEEccCCcEEEEEe-cC--eEEEEECCCCCCCcccceee-----ee--------ecCCCCEEEEEccCC
Q psy14511        320 AITREGDVVCGLKWSPNGRYLASGS-NN--TVKIWDFRQLDAKRPLGLIV-----PK--------LKREGRELVTSHGKQ  383 (488)
Q Consensus       320 ~~~~~~~~i~~~~~s~~~~~l~~~~-d~--~i~iwd~~~~~~~~~~~~~~-----~~--------~~~~~~~l~~~~g~~  383 (488)
                      .+..|...+..++|||||++|+++. ++  .|++||+.+++.. .+....     ..        |+|||..+++  +..
T Consensus       189 ~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~--~~~  265 (582)
T 3o4h_A          189 VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVV--ARR  265 (582)
T ss_dssp             EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEE--EEE
T ss_pred             EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEE--EEc
Confidence            6778888899999999999999666 46  8999999887654 222211     15        9999966666  678


Q ss_pred             CCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCC---cEEEEecCC
Q psy14511        384 DCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADE---TISIWNCFP  436 (488)
Q Consensus       384 ~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg---~v~iw~~~~  436 (488)
                      ++.+++|++  ++...   .+.+.+.+++|+ |++++++++.+.   .+++|+..+
T Consensus       266 ~g~~~l~~~--g~~~~---~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~~  315 (582)
T 3o4h_A          266 EGRSAVFID--GERVE---APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSGE  315 (582)
T ss_dssp             TTEEEEEET--TEEEC---CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC
T ss_pred             CCcEEEEEE--CCeec---cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCCC
Confidence            999999999  66544   344678999999 999999988774   477777654

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.90  E-value=9.7e-22  Score=177.22  Aligned_cols=188  Identities=9%  Similarity=0.098  Sum_probs=125.8

Q ss_pred             ceEEEEEcCCCCeEEEEeCCCCcEEEEEC---CcceeeeeeccccccEEEEEe--cCCEEEEee-cCCeEEEEECcCCCc
Q psy14511        243 YISCVAWKPRTTDLAVTNTCTEYIDLWHE---QEERLIQKLRTHMHQVIAMCW--NGNLLSCGT-IGGNILHYDVRTHSD  316 (488)
Q Consensus       243 ~i~~~~~~~~~~~l~~~~~~~~~i~i~d~---~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~-~dg~i~i~d~~~~~~  316 (488)
                      .+..++|+|+++++++++..++.|.+||+   ...+....+..+ ..+.+++|  +++.+++++ .++.|++||+.+...
T Consensus        85 ~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~  163 (343)
T 1ri6_A           85 SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGH  163 (343)
T ss_dssp             CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSC
T ss_pred             CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCc
Confidence            57789999999988887566899999999   444455555443 34667777  677777777 899999999987332


Q ss_pred             cce----eee-cCCccEEEEEEccCCcEEEEEe--cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEE
Q psy14511        317 YPT----AIT-REGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKM  389 (488)
Q Consensus       317 ~~~----~~~-~~~~~i~~~~~s~~~~~l~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i  389 (488)
                      ...    ... .....+..++|+|+++++++++  ++.+.+|++....                           +.+..
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~---------------------------g~~~~  216 (343)
T 1ri6_A          164 LVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPH---------------------------GNIEC  216 (343)
T ss_dssp             EEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTT---------------------------SCCEE
T ss_pred             eeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCC---------------------------CcEEE
Confidence            221    122 2344688899999999776665  4889999885321                           00000


Q ss_pred             EeCCCcceeEEEe---eccccEEEEEEcCCCCEEEE-EeCCCcEEEEecC--CCCc--cccccccCCcceEEeecCCCce
Q psy14511        390 WEYPRLHLIEELK---IHQERILSAVLSPDQTCVAA-ASADETISIWNCF--PRDK--KRKARQVGSGSSLEFAILKQPV  461 (488)
Q Consensus       390 ~d~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~t-~~~dg~v~iw~~~--~~~~--~~~~~~~~~v~~~~~s~~~~~~  461 (488)
                      .     +....+.   .....+..++|+||+++|++ +..|+.|.+|++.  +++.  .........+..++|+|+++.+
T Consensus       217 ~-----~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l  291 (343)
T 1ri6_A          217 V-----QTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYL  291 (343)
T ss_dssp             E-----EEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEE
T ss_pred             E-----eeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEE
Confidence            0     0000011   11235778999999998875 4578999999998  3322  2223334458899999999876


Q ss_pred             EE
Q psy14511        462 SL  463 (488)
Q Consensus       462 ~~  463 (488)
                      ..
T Consensus       292 ~~  293 (343)
T 1ri6_A          292 IA  293 (343)
T ss_dssp             EE
T ss_pred             EE
Confidence            44

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.90  E-value=1.2e-21  Score=177.11  Aligned_cols=108  Identities=11%  Similarity=0.022  Sum_probs=76.7

Q ss_pred             ccCCceEEEeecCCeEEEEEcccCcccceeecccC-ceEEEEEEccCCcEEEEe-c-CCeEEEEeccccCcCCCcccccc
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREG-DVVCGLKWSPNGRYLASG-S-NNTVKIWDFRQLDAKRPQVNNQC   78 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~-~~V~~l~~sp~g~~las~-~-d~~i~vwd~~~~~~~~~~~~~~~   78 (488)
                      +.+++++++++.++.|.+||+.+++.+. .+..+. ..+..++|+|+|++++.+ . ++.|.+||+.+++....+. . .
T Consensus         8 ~~~~~~~v~~~~~~~v~~~d~~~~~~~~-~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~-~-~   84 (349)
T 1jmx_B            8 KAGHEYMIVTNYPNNLHVVDVASDTVYK-SCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHAN-L-S   84 (349)
T ss_dssp             CTTCEEEEEEETTTEEEEEETTTTEEEE-EEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-S-C
T ss_pred             cCCCEEEEEeCCCCeEEEEECCCCcEEE-EEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEE-c-c
Confidence            3478899999999999999999887543 333332 257889999999866544 4 8999999998755332221 1 1


Q ss_pred             c-----ccceeEEEEecCCCeEEeeeCCccc------------ceEEEEecCCC
Q psy14511         79 H-----LSAVKAIAWCPWEPTLLATGGGICD------------QTVRLWNSMNG  115 (488)
Q Consensus        79 h-----~~~v~~l~~~~~~~~l~~~~~~~~d------------~~i~vwd~~~~  115 (488)
                      +     ...+..++|+|||++++++..   +            +.|.+||+.++
T Consensus        85 ~~~~~~~~~~~~~~~spdg~~l~~~~~---~~~~~~~~~~~~~~~i~~~d~~~~  135 (349)
T 1jmx_B           85 SVPGEVGRSMYSFAISPDGKEVYATVN---PTQRLNDHYVVKPPRLEVFSTADG  135 (349)
T ss_dssp             CSTTEEEECSSCEEECTTSSEEEEEEE---EEEECSSCEEECCCEEEEEEGGGG
T ss_pred             cccccccccccceEECCCCCEEEEEcc---cccccccccccCCCeEEEEECCCc
Confidence            2     234789999999998888774   4            56666666543

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.90  E-value=6e-21  Score=189.50  Aligned_cols=358  Identities=9%  Similarity=0.011  Sum_probs=205.7

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccceeecccCce-----EEEEEEccCCcEEEEec-C---------CeEEEEeccccC
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDV-----VCGLKWSPNGRYLASGS-N---------NTVKIWDFRQLD   68 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~-----V~~l~~sp~g~~las~~-d---------~~i~vwd~~~~~   68 (488)
                      ||++|+++  ||+|++||+.+++.. ..+.+|...     ...++|||||++|++++ +         +.+.+||+.+++
T Consensus        27 dg~~~~~~--~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~  103 (740)
T 4a5s_A           27 DHEYLYKQ--ENNILVFNAEYGNSS-VFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQ  103 (740)
T ss_dssp             SSEEEEEE--TTEEEEEETTTCCEE-EEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTE
T ss_pred             CCcEEEEc--CCcEEEEECCCCceE-EEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCc
Confidence            89999986  999999999998853 556666532     23478899999999987 3         677899999865


Q ss_pred             cCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEE
Q psy14511         69 AKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLL  148 (488)
Q Consensus        69 ~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (488)
                      ...    +..|.+.+...+|||||+.|+.+ .   ++.|++|++.+++..+....... ..  .+               
T Consensus       104 ~~~----l~~~~~~~~~~~~SPdG~~la~~-~---~~~i~~~~~~~~~~~~lt~~g~~-~~--~~---------------  157 (740)
T 4a5s_A          104 LIT----EERIPNNTQWVTWSPVGHKLAYV-W---NNDIYVKIEPNLPSYRITWTGKE-DI--IY---------------  157 (740)
T ss_dssp             ECC----SSCCCTTEEEEEECSSTTCEEEE-E---TTEEEEESSTTSCCEECCSCCBT-TT--EE---------------
T ss_pred             EEE----cccCCCcceeeEECCCCCEEEEE-E---CCeEEEEECCCCceEEEcCCCCc-cc--ee---------------
Confidence            332    45577889999999999988776 4   88999999988764332111100 00  00               


Q ss_pred             eeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCe-EEEEECCC
Q psy14511        149 HGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTS-VYTWNTKT  227 (488)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-v~iw~~~~  227 (488)
                      .|.     .-+.+.+                        .++        .....+.|++        ||+ |.....+.
T Consensus       158 ~g~-----~~~v~~e------------------------e~~--------~~~~~~~wSp--------Dg~~la~~~~d~  192 (740)
T 4a5s_A          158 NGI-----TDWVYEE------------------------EVF--------SAYSALWWSP--------NGTFLAYAQFND  192 (740)
T ss_dssp             ESB-----CCHHHHH------------------------HTS--------SSSBCEEECT--------TSSEEEEEEEEC
T ss_pred             cCc-----ccccccc------------------------hhc--------CCCcceEECC--------CCCEEEEEEEcc
Confidence            000     0000000                        000        0000122322        222 21111111


Q ss_pred             C--ceEEEEecCCC--CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCc---ce--eeeeec------cccccEEEEEe
Q psy14511        228 N--KTQLLVEYPTY--DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE---ER--LIQKLR------THMHQVIAMCW  292 (488)
Q Consensus       228 ~--~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~---~~--~~~~~~------~~~~~v~~~~~  292 (488)
                      .  ...........  +......+.+.+.|..     .....|++||+.+   ++  ....+.      +|...+..++|
T Consensus       193 ~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~-----~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~w  267 (740)
T 4a5s_A          193 TEVPLIEYSFYSDESLQYPKTVRVPYPKAGAV-----NPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTW  267 (740)
T ss_dssp             TTCCEEEEEECCSTTCSSCEEEEEECCBTTSC-----CCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEE
T ss_pred             cCCceEEEEeecCCCCCCCcceeecCCCCcCc-----CCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEE
Confidence            1  11111111000  1233445555555432     1223688999988   63  222332      37778888888


Q ss_pred             --cCCEEEEeec----CCeEEEEECcCCC----c-cceee--ecCCccEE-----EEEEccCCcEEE-EEe--c--CeEE
Q psy14511        293 --NGNLLSCGTI----GGNILHYDVRTHS----D-YPTAI--TREGDVVC-----GLKWSPNGRYLA-SGS--N--NTVK  349 (488)
Q Consensus       293 --~~~~l~~~~~----dg~i~i~d~~~~~----~-~~~~~--~~~~~~i~-----~~~~s~~~~~l~-~~~--d--~~i~  349 (488)
                        |++.++....    +..|++||+.+++    . ....+  ..+...+.     .++|+|||+.|+ ..+  +  ..|.
T Consensus       268 spdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~  347 (740)
T 4a5s_A          268 ATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHIC  347 (740)
T ss_dssp             EETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEE
T ss_pred             eCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEE
Confidence              7876665533    2379999998865    1 11222  34544443     688999999877 665  2  5688


Q ss_pred             EEECCCCCCCccccee---eeeecCCCCEEEEEccC---CC--CeEEEEeCCCcceeEEEee----ccccEEEEEEcCCC
Q psy14511        350 IWDFRQLDAKRPLGLI---VPKLKREGRELVTSHGK---QD--CSLKMWEYPRLHLIEELKI----HQERILSAVLSPDQ  417 (488)
Q Consensus       350 iwd~~~~~~~~~~~~~---~~~~~~~~~~l~~~~g~---~~--~~i~i~d~~~~~~~~~~~~----~~~~v~~~~~s~~~  417 (488)
                      +||+..++..+.....   ...+.+|++.++..+..   ..  ..|+..++..++....+..    .......+.||||+
T Consensus       348 ~~~~~~~~~~~lT~g~~~v~~~~~~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg  427 (740)
T 4a5s_A          348 YFQIDKKDCTFITKGTWEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEA  427 (740)
T ss_dssp             EEETTCSSCEESCCSSSCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTS
T ss_pred             EEECCCCceEecccCCEEEEEEEEEeCCEEEEEEecCCCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCC
Confidence            8998866443322111   11344667777665222   12  3455556555443323432    23568899999999


Q ss_pred             CEEEEEeCC---CcEEEEecCCCCcc
Q psy14511        418 TCVAAASAD---ETISIWNCFPRDKK  440 (488)
Q Consensus       418 ~~l~t~~~d---g~v~iw~~~~~~~~  440 (488)
                      ++++.....   ..+.+++..+++..
T Consensus       428 ~~~~~~~s~~~~p~~~l~~~~~~~~~  453 (740)
T 4a5s_A          428 KYYQLRCSGPGLPLYTLHSSVNDKGL  453 (740)
T ss_dssp             SEEEEEECSBSSCEEEEEETTTTEEE
T ss_pred             CEEEEEeCCCCCCEEEEEECCCCcEE
Confidence            987655433   46888888776543

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.88  E-value=1.8e-20  Score=173.05  Aligned_cols=230  Identities=13%  Similarity=0.148  Sum_probs=153.7

Q ss_pred             cCCceEEEeecCCeEEEEEcccCcc----------c----ceeecccCceEEEEEEccCCcEEE----Eec-CCeEEEEe
Q psy14511          3 WNGNLLSCGTIGGNILHYDVRTHSD----------Y----PTAITREGDVVCGLKWSPNGRYLA----SGS-NNTVKIWD   63 (488)
Q Consensus         3 ~dg~~la~g~~dg~i~iwd~~~~~~----------~----~~~~~~h~~~V~~l~~sp~g~~la----s~~-d~~i~vwd   63 (488)
                      .++.++++|+.++ ++||+......          +    ......|...|.+++|+|+|++||    +++ |+.|+|||
T Consensus        46 ~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd  124 (434)
T 2oit_A           46 NKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFD  124 (434)
T ss_dssp             TTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEE
T ss_pred             cCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEE
Confidence            3678889888887 88987642110          0    011123566799999999999999    677 99999999


Q ss_pred             cccc-----Cc---CCCcccccccccceeEEEEecC-CCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCcccccccc
Q psy14511         64 FRQL-----DA---KRPQVNNQCHLSAVKAIAWCPW-EPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETIS  134 (488)
Q Consensus        64 ~~~~-----~~---~~~~~~~~~h~~~v~~l~~~~~-~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~  134 (488)
                      +.+.     +.   ...+..+.+|...|.+++|+|+ +..+++++.   |++|++||+.++.....              
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~---Dg~v~iwD~~~~~~~~~--------------  187 (434)
T 2oit_A          125 VRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLA---DGSIAVLQVTETVKVCA--------------  187 (434)
T ss_dssp             HHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEET---TSCEEEEEESSSEEEEE--------------
T ss_pred             ccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEEC---CCeEEEEEcCCCcceee--------------
Confidence            9865     11   1123456779999999999998 544544554   99999999976642110              


Q ss_pred             ccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEE
Q psy14511        135 YREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAV  214 (488)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (488)
                                                                                                      
T Consensus       188 --------------------------------------------------------------------------------  187 (434)
T 2oit_A          188 --------------------------------------------------------------------------------  187 (434)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecc-------ccccE
Q psy14511        215 ALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRT-------HMHQV  287 (488)
Q Consensus       215 ~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~-------~~~~v  287 (488)
                                           ..+ |...+.+++|+|+|++|+++ +.||.|++||.+ ++....+..       |...+
T Consensus       188 ---------------------~~~-~~~~v~~v~wspdg~~lasg-s~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v  243 (434)
T 2oit_A          188 ---------------------TLP-STVAVTSVCWSPKGKQLAVG-KQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRV  243 (434)
T ss_dssp             ---------------------EEC-GGGCEEEEEECTTSSCEEEE-ETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEE
T ss_pred             ---------------------ccC-CCCceeEEEEcCCCCEEEEE-cCCCcEEEEccC-CcccccccCCcccCCCCceeE
Confidence                                 011 56689999999999999999 899999999998 444444433       23488


Q ss_pred             EEEEec--CCEEEE-eecCC------eEEEEECcCCCcc-ceeee----------cCCccEEEEEEccCCcEEEEEe-c-
Q psy14511        288 IAMCWN--GNLLSC-GTIGG------NILHYDVRTHSDY-PTAIT----------REGDVVCGLKWSPNGRYLASGS-N-  345 (488)
Q Consensus       288 ~~~~~~--~~~l~~-~~~dg------~i~i~d~~~~~~~-~~~~~----------~~~~~i~~~~~s~~~~~l~~~~-d-  345 (488)
                      .+++|+  +.++++ ...+|      .+++|+++..+.. ...+.          ....+-..+.+-++.+++++++ . 
T Consensus       244 ~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s  323 (434)
T 2oit_A          244 LDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAAS  323 (434)
T ss_dssp             EEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTC
T ss_pred             EEEEEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCC
Confidence            999993  344433 33333      3899999864311 11111          1122223344447777777776 3 


Q ss_pred             CeEEEEECC
Q psy14511        346 NTVKIWDFR  354 (488)
Q Consensus       346 ~~i~iwd~~  354 (488)
                      +.|.++...
T Consensus       324 ~dv~vl~~~  332 (434)
T 2oit_A          324 TEVSILARQ  332 (434)
T ss_dssp             SBCEEEEEC
T ss_pred             CceeEEEec
Confidence            777777754

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.88  E-value=5.3e-20  Score=166.02  Aligned_cols=237  Identities=12%  Similarity=0.124  Sum_probs=158.9

Q ss_pred             ccCCceEEEeec--CCeEEEEEcccCccc-ceeecccCceEEEEEEccCCcEEEEec--CCeEEEEeccccCcCCCcccc
Q psy14511          2 CWNGNLLSCGTI--GGNILHYDVRTHSDY-PTAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAKRPQVNN   76 (488)
Q Consensus         2 ~~dg~~la~g~~--dg~i~iwd~~~~~~~-~~~~~~h~~~V~~l~~sp~g~~las~~--d~~i~vwd~~~~~~~~~~~~~   76 (488)
                      +.||++++++..  ++.|.+||+.+++.. ...+..+...+..++|+|||++|++++  ++.|.+|++........+...
T Consensus        48 spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~  127 (347)
T 3hfq_A           48 SAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTV  127 (347)
T ss_dssp             CTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEE
T ss_pred             ccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeeccee
Confidence            348884444432  689999999766521 223345777889999999999888876  799999999632212222211


Q ss_pred             cc---------cccceeEEEEecCCCeEEeeeCCcccceEEEEecC-CCeeeeeeecCCCccccccccccccccceeEEE
Q psy14511         77 QC---------HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSM-NGKEKCHVKTDSQQANDETISYREQKKRRHLSF  146 (488)
Q Consensus        77 ~~---------h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (488)
                      ..         +...+.+++|+|||+ ++++...  ++.|.+|++. +++....                          
T Consensus       128 ~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~--~~~v~~~~~~~~g~~~~~--------------------------  178 (347)
T 3hfq_A          128 QHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLG--SDKVYVYNVSDAGQLSEQ--------------------------  178 (347)
T ss_dssp             ECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETT--TTEEEEEEECTTSCEEEE--------------------------
T ss_pred             ecCCCCCCccccCCCceEEEECCCCc-EEEEeCC--CCEEEEEEECCCCcEEEe--------------------------
Confidence            11         223488999999998 7777664  8899999987 3331100                          


Q ss_pred             EEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECC
Q psy14511        147 LLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTK  226 (488)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~  226 (488)
                                                                                                      
T Consensus       179 --------------------------------------------------------------------------------  178 (347)
T 3hfq_A          179 --------------------------------------------------------------------------------  178 (347)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCc--cee--eeeecccc------ccEEEEEe--cC
Q psy14511        227 TNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE--ERL--IQKLRTHM------HQVIAMCW--NG  294 (488)
Q Consensus       227 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~--~~~--~~~~~~~~------~~v~~~~~--~~  294 (488)
                           ......  ....+..++|+|+|+++++++..++.+.+|++..  ++.  +..+....      ..+..++|  +|
T Consensus       179 -----~~~~~~--~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG  251 (347)
T 3hfq_A          179 -----SVLTME--AGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDG  251 (347)
T ss_dssp             -----EEEECC--TTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTS
T ss_pred             -----eeEEcC--CCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCC
Confidence                 000110  2234678999999998887657889999999874  432  22232222      34777888  78


Q ss_pred             CEE-EEeecCCeEEEEECcCCC--ccceeeecCCccEEEEEEccCCcEEEEEe-c-CeEEEEECC
Q psy14511        295 NLL-SCGTIGGNILHYDVRTHS--DYPTAITREGDVVCGLKWSPNGRYLASGS-N-NTVKIWDFR  354 (488)
Q Consensus       295 ~~l-~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d-~~i~iwd~~  354 (488)
                      ++| ++...++.|.+|++....  .....+..+...+..++|+|||++|++++ + +.+.+|++.
T Consensus       252 ~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d  316 (347)
T 3hfq_A          252 HFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD  316 (347)
T ss_dssp             CEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred             CEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence            877 455668999999997432  23344455555678999999999988887 4 899999664

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.88  E-value=3.5e-20  Score=167.04  Aligned_cols=213  Identities=9%  Similarity=0.056  Sum_probs=151.1

Q ss_pred             ceEEEEEcCCCCeEEEEeCC-CCcEEEEECCcceeeee-eccccccEEEEEec-CCEEEEeecCCeEEEEECcCCCccc-
Q psy14511        243 YISCVAWKPRTTDLAVTNTC-TEYIDLWHEQEERLIQK-LRTHMHQVIAMCWN-GNLLSCGTIGGNILHYDVRTHSDYP-  318 (488)
Q Consensus       243 ~i~~~~~~~~~~~l~~~~~~-~~~i~i~d~~~~~~~~~-~~~~~~~v~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~-  318 (488)
                      ....++++|+|++|+++... ++.|.+||+.+++.+.. +.........+..+ +..+++.+.||.+.+|++....... 
T Consensus       109 ~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~  188 (361)
T 2oiz_A          109 YDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVAS  188 (361)
T ss_dssp             CGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEE
T ss_pred             CcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEee
Confidence            45578999999999998333 68999999999988877 65322111112223 3678888999999999986533222 


Q ss_pred             -----eeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCC--ccc---------------ceeeeeecCCCCE
Q psy14511        319 -----TAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAK--RPL---------------GLIVPKLKREGRE  375 (488)
Q Consensus       319 -----~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~--~~~---------------~~~~~~~~~~~~~  375 (488)
                           ..+.....++ .+.++|++..++..+ ++.+.++|+......  ..+               .....+++|+++.
T Consensus       189 ~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~  267 (361)
T 2oiz_A          189 QSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGR  267 (361)
T ss_dssp             EEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTE
T ss_pred             eccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCe
Confidence                 1122222222 344567787777766 589999998654211  000               0011378999888


Q ss_pred             EEEEcc--C-------CCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCC--Ccccc-c
Q psy14511        376 LVTSHG--K-------QDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPR--DKKRK-A  443 (488)
Q Consensus       376 l~~~~g--~-------~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~--~~~~~-~  443 (488)
                      ++++..  .       ..+.|.+||+.+++.+.++..+.  +.+++|+|||++|++++. +.|.+||..++  +.... .
T Consensus       268 lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~  344 (361)
T 2oiz_A          268 MYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIE  344 (361)
T ss_dssp             EEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEET
T ss_pred             EEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEec
Confidence            887532  1       13589999999999999998877  999999999999998887 99999999999  76655 3


Q ss_pred             cccCCcceEEeecCCC
Q psy14511        444 RQVGSGSSLEFAILKQ  459 (488)
Q Consensus       444 ~~~~~v~~~~~s~~~~  459 (488)
                      ........++++|+|.
T Consensus       345 ~~G~~P~~~~~~p~G~  360 (361)
T 2oiz_A          345 GAAEASLQVQFHPVGG  360 (361)
T ss_dssp             TSCSSEEEEEECCCSC
T ss_pred             cCCCCcEEEEecCCCC
Confidence            5667778999999886

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.88  E-value=3.7e-20  Score=169.89  Aligned_cols=290  Identities=10%  Similarity=0.044  Sum_probs=188.4

Q ss_pred             EEEcccCcccceeecccCceEEE-----EEEccCCcEEEEec--CC--eEEEEeccccCcCCCcccccccccceeEEEEe
Q psy14511         19 HYDVRTHSDYPTAITREGDVVCG-----LKWSPNGRYLASGS--NN--TVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWC   89 (488)
Q Consensus        19 iwd~~~~~~~~~~~~~h~~~V~~-----l~~sp~g~~las~~--d~--~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~   89 (488)
                      .+|..++..+ ..+..|......     .+|||||++|++++  ++  .|.+||+.+++...   ...++...+..+.|+
T Consensus        14 ~~~~~~g~~~-~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~---lt~~~~~~~~~~~~s   89 (388)
T 3pe7_A           14 YQDASTGAQV-TRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQ---LTEGRGDNTFGGFLS   89 (388)
T ss_dssp             EECTTTCCEE-EECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEE---CCCSSCBCSSSCEEC
T ss_pred             EecCCCCcce-EEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEE---eeeCCCCCccceEEc
Confidence            4566666644 557777766666     89999999999887  45  48888988755332   234455556678899


Q ss_pred             cCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccce
Q psy14511         90 PWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPT  169 (488)
Q Consensus        90 ~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (488)
                      ||++.|+++..   ++.+++||+.+++.......+                                             
T Consensus        90 pdg~~l~~~~~---~~~l~~~d~~~g~~~~~~~~~---------------------------------------------  121 (388)
T 3pe7_A           90 PDDDALFYVKD---GRNLMRVDLATLEENVVYQVP---------------------------------------------  121 (388)
T ss_dssp             TTSSEEEEEET---TTEEEEEETTTCCEEEEEECC---------------------------------------------
T ss_pred             CCCCEEEEEeC---CCeEEEEECCCCcceeeeech---------------------------------------------
Confidence            99999888886   889999999887643322211                                             


Q ss_pred             eeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceE--EE
Q psy14511        170 QFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYIS--CV  247 (488)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~--~~  247 (488)
                                                                                             ...+.  ..
T Consensus       122 -----------------------------------------------------------------------~~~~~~~~~  130 (388)
T 3pe7_A          122 -----------------------------------------------------------------------AEWVGYGTW  130 (388)
T ss_dssp             -----------------------------------------------------------------------TTEEEEEEE
T ss_pred             -----------------------------------------------------------------------hhcccccce
Confidence                                                                                   01111  11


Q ss_pred             EEcCCCCeEEEE---------------------eCCCCcEEEEECCcceeeeeeccccccEEEEEe---cCCEEEEeecC
Q psy14511        248 AWKPRTTDLAVT---------------------NTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW---NGNLLSCGTIG  303 (488)
Q Consensus       248 ~~~~~~~~l~~~---------------------~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d  303 (488)
                      .++|+++.++..                     ...+..|.+||+.+++.. .+..+...+..+.|   +++.|+....+
T Consensus       131 ~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~-~l~~~~~~~~~~~~sp~dg~~l~~~~~~  209 (388)
T 3pe7_A          131 VANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGEST-VILQENQWLGHPIYRPYDDSTVAFCHEG  209 (388)
T ss_dssp             EECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEE-EEEEESSCEEEEEEETTEEEEEEEEECS
T ss_pred             eECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceE-EeecCCccccccEECCCCCCEEEEEEec
Confidence            123444433321                     034578999999887544 33345556666666   56777776653


Q ss_pred             ------CeEEEEECcCCCccceeeecCC--ccEEEEEEccCCcEEEEEe-c-C----eEEEEECCCCCCCcccc--e---
Q psy14511        304 ------GNILHYDVRTHSDYPTAITREG--DVVCGLKWSPNGRYLASGS-N-N----TVKIWDFRQLDAKRPLG--L---  364 (488)
Q Consensus       304 ------g~i~i~d~~~~~~~~~~~~~~~--~~i~~~~~s~~~~~l~~~~-d-~----~i~iwd~~~~~~~~~~~--~---  364 (488)
                            ..|.++|.....  ...+..+.  ..+..++|+|||+.|+..+ + +    .|++||+.+++......  .   
T Consensus       210 ~~~~~~~~l~~~d~~~~~--~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~  287 (388)
T 3pe7_A          210 PHDLVDARMWLINEDGTN--MRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSH  287 (388)
T ss_dssp             CTTTSSCSEEEEETTSCC--CEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEE
T ss_pred             CCCCCcceEEEEeCCCCc--eEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCcee
Confidence                  378888876532  33344443  3578899999999887655 2 2    39999999875422111  1   


Q ss_pred             ----e-eeeecCCCCEEEEEc-------cCCCCeEEEEeCCCcceeEEEeeccc-----------cEEEEEEcCCCCEEE
Q psy14511        365 ----I-VPKLKREGRELVTSH-------GKQDCSLKMWEYPRLHLIEELKIHQE-----------RILSAVLSPDQTCVA  421 (488)
Q Consensus       365 ----~-~~~~~~~~~~l~~~~-------g~~~~~i~i~d~~~~~~~~~~~~~~~-----------~v~~~~~s~~~~~l~  421 (488)
                          . ...|+|||+.++...       ...+..|++||+.+++. ..+..|..           .+..++|+|||+.|+
T Consensus       288 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~  366 (388)
T 3pe7_A          288 LMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ-HRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQIL  366 (388)
T ss_dssp             EEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEE-EEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEE
T ss_pred             eeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce-EEeccccCcccccccccccCCCCccCCCCCCEEE
Confidence                0 116999999988642       14567899999998765 45555655           578899999999888


Q ss_pred             EEe-CCCcEEEEecC
Q psy14511        422 AAS-ADETISIWNCF  435 (488)
Q Consensus       422 t~~-~dg~v~iw~~~  435 (488)
                      ..+ .+|...+|.+.
T Consensus       367 ~~s~~~g~~~l~~~~  381 (388)
T 3pe7_A          367 FTSDVHGKPALYLAT  381 (388)
T ss_dssp             EEECTTSSCEEEEEE
T ss_pred             EEecCCCceeEEEEE
Confidence            766 46766676654

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.87  E-value=9.4e-21  Score=183.28  Aligned_cols=258  Identities=10%  Similarity=0.058  Sum_probs=175.9

Q ss_pred             ccCCceEEEeec-CCeEEEEEcccCcccceeecccC-ceEEEEEEccCCcEEEEec----CCeEEEEeccc--cCcCCCc
Q psy14511          2 CWNGNLLSCGTI-GGNILHYDVRTHSDYPTAITREG-DVVCGLKWSPNGRYLASGS----NNTVKIWDFRQ--LDAKRPQ   73 (488)
Q Consensus         2 ~~dg~~la~g~~-dg~i~iwd~~~~~~~~~~~~~h~-~~V~~l~~sp~g~~las~~----d~~i~vwd~~~--~~~~~~~   73 (488)
                      +.||++||+++. ||++.||++.+++ . ..+..|. ..+..++|||| +++++++    +....+|.+..  ......+
T Consensus        30 ~~DG~~la~~s~~~g~~~lw~~~~g~-~-~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~~l  106 (582)
T 3o4h_A           30 VVDGDKLLVVGFSEGSVNAYLYDGGE-T-VKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQRL  106 (582)
T ss_dssp             EETTTEEEEEEEETTEEEEEEEETTE-E-EECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCEEC
T ss_pred             CCCCCeEEEEEccCCceeEEEEcCCC-c-EeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccccc
Confidence            459999998876 9999999986655 3 3455555 68999999999 7777654    35566665543  2212222


Q ss_pred             ccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeec
Q psy14511         74 VNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEI  153 (488)
Q Consensus        74 ~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (488)
                      ...    ..+...+|+||++.++.++..  ++.+.+||+.+++.........   ....                     
T Consensus       107 ~~~----~~~~~~~~s~dg~~~~~~s~~--~~~~~l~d~~~g~~~~l~~~~~---~~~~---------------------  156 (582)
T 3o4h_A          107 EAV----KPMRILSGVDTGEAVVFTGAT--EDRVALYALDGGGLRELARLPG---FGFV---------------------  156 (582)
T ss_dssp             TTS----CSBEEEEEEECSSCEEEEEEC--SSCEEEEEEETTEEEEEEEESS---CEEE---------------------
T ss_pred             cCC----CCceeeeeCCCCCeEEEEecC--CCCceEEEccCCcEEEeecCCC---ceEE---------------------
Confidence            211    233466899998765444332  5566699998887544332221   1111                     


Q ss_pred             cccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECC----CeEEEEECCCCc
Q psy14511        154 DRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALD----TSVYTWNTKTNK  229 (488)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d----~~v~iw~~~~~~  229 (488)
                                                                        ++.++..++.++.+    +.|++||+.+++
T Consensus       157 --------------------------------------------------~spDG~~la~~~~~~~~~~~i~~~d~~~g~  186 (582)
T 3o4h_A          157 --------------------------------------------------SDIRGDLIAGLGFFGGGRVSLFTSNLSSGG  186 (582)
T ss_dssp             --------------------------------------------------EEEETTEEEEEEEEETTEEEEEEEETTTCC
T ss_pred             --------------------------------------------------ECCCCCEEEEEEEcCCCCeEEEEEcCCCCC
Confidence                                                              11122344445544    679999999888


Q ss_pred             eEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCC--cEEEEECCcceeeeeeccccccEEEEE--------e--cCCEE
Q psy14511        230 TQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTE--YIDLWHEQEERLIQKLRTHMHQVIAMC--------W--NGNLL  297 (488)
Q Consensus       230 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~--~i~i~d~~~~~~~~~~~~~~~~v~~~~--------~--~~~~l  297 (488)
                      ...+.   . +...+..++|+|||+.|+++ ..++  .|++||+.+++.. .+..|...+..+.        |  ||.++
T Consensus       187 ~~~l~---~-~~~~~~~~~~SpDG~~l~~~-~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~  260 (582)
T 3o4h_A          187 LRVFD---S-GEGSFSSASISPGMKVTAGL-ETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLA  260 (582)
T ss_dssp             CEEEC---C-SSCEEEEEEECTTSCEEEEE-ECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEE
T ss_pred             ceEee---c-CCCccccceECCCCCEEEEc-cCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEE
Confidence            66442   2 66788999999999999966 7888  8999999988777 6666666555444        6  78889


Q ss_pred             EEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-c---CeEEEEECCC
Q psy14511        298 SCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-N---NTVKIWDFRQ  355 (488)
Q Consensus       298 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d---~~i~iwd~~~  355 (488)
                      ++++.++.+++|++  ++ ...   .....+.+++|+ +++++++++ +   ..+.+||...
T Consensus       261 ~~~~~~g~~~l~~~--g~-~~~---~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~~  315 (582)
T 3o4h_A          261 VVARREGRSAVFID--GE-RVE---APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSGE  315 (582)
T ss_dssp             EEEEETTEEEEEET--TE-EEC---CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC
T ss_pred             EEEEcCCcEEEEEE--CC-eec---cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCCC
Confidence            99999999999999  32 222   334678899999 999988876 4   4566776653

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.87  E-value=2.2e-20  Score=171.34  Aligned_cols=218  Identities=11%  Similarity=0.006  Sum_probs=149.3

Q ss_pred             EEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe----cCCEEEEe--------------------
Q psy14511        245 SCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW----NGNLLSCG--------------------  300 (488)
Q Consensus       245 ~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~----~~~~l~~~--------------------  300 (488)
                      ..++|+|+++.|+++ ..++.|++||+.+++.......+...+....+    +++.++..                    
T Consensus        84 ~~~~~spdg~~l~~~-~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~  162 (388)
T 3pe7_A           84 FGGFLSPDDDALFYV-KDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFY  162 (388)
T ss_dssp             SSCEECTTSSEEEEE-ETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHG
T ss_pred             cceEEcCCCCEEEEE-eCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhh
Confidence            346799999999998 77889999999988776666555554433332    67777642                    


Q ss_pred             --ecCCeEEEEECcCCCccceeeecCCccEEEEEEcc-CCcEEEEEec-C------eEEEEECCCCCCCcccc------e
Q psy14511        301 --TIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSP-NGRYLASGSN-N------TVKIWDFRQLDAKRPLG------L  364 (488)
Q Consensus       301 --~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~d-~------~i~iwd~~~~~~~~~~~------~  364 (488)
                        ..+..|++||+.+++  ...+..+...+..++|+| ||+.|+...+ +      .|.++|....+......      .
T Consensus       163 ~~~~~~~l~~~d~~~g~--~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~  240 (388)
T 3pe7_A          163 FTKPCCRLMRVDLKTGE--STVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESC  240 (388)
T ss_dssp             GGCCCEEEEEEETTTCC--EEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEE
T ss_pred             ccCCcceEEEEECCCCc--eEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCccc
Confidence              234679999998763  344555666789999999 9999988763 2      78888876554322221      1


Q ss_pred             eeeeecCCCCEEEEEccCCC---CeEEEEeCCCccee--EEEeecccc---EEEEEEcCCCCEEEEE---------eCCC
Q psy14511        365 IVPKLKREGRELVTSHGKQD---CSLKMWEYPRLHLI--EELKIHQER---ILSAVLSPDQTCVAAA---------SADE  427 (488)
Q Consensus       365 ~~~~~~~~~~~l~~~~g~~~---~~i~i~d~~~~~~~--~~~~~~~~~---v~~~~~s~~~~~l~t~---------~~dg  427 (488)
                      ....|+|||+.|+..+...+   ..|++||+.+++..  ..+.++...   ...++|+|||+.|+..         ..+.
T Consensus       241 ~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~  320 (388)
T 3pe7_A          241 THEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDP  320 (388)
T ss_dssp             EEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCC
T ss_pred             ccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCC
Confidence            12389999998876533222   24999999988743  333331111   1123799999988864         4567


Q ss_pred             cEEEEecCCCCccccccccC-----------CcceEEeecCCCceEEEE
Q psy14511        428 TISIWNCFPRDKKRKARQVG-----------SGSSLEFAILKQPVSLTA  465 (488)
Q Consensus       428 ~v~iw~~~~~~~~~~~~~~~-----------~v~~~~~s~~~~~~~~~~  465 (488)
                      .|++||+.+++...+..+..           .+.+++|+|||+.+.+..
T Consensus       321 ~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s  369 (388)
T 3pe7_A          321 FLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTS  369 (388)
T ss_dssp             EEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEE
T ss_pred             EEEEEeccCCceEEeccccCcccccccccccCCCCccCCCCCCEEEEEe
Confidence            89999999988766655555           578899999999886543

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.86  E-value=1.9e-19  Score=163.26  Aligned_cols=160  Identities=14%  Similarity=0.127  Sum_probs=107.3

Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECC-cceee--eeec--cccccEEEEEe--cCCEEEEeec-CCeEEEEEC
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQ-EERLI--QKLR--THMHQVIAMCW--NGNLLSCGTI-GGNILHYDV  311 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~-~~~~~--~~~~--~~~~~v~~~~~--~~~~l~~~~~-dg~i~i~d~  311 (488)
                      +...+.+++|+|+|++++++...++.|++|++. +++..  ..+.  .+...+..++|  +|+++++++. ++.+.+|++
T Consensus       143 ~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~  222 (365)
T 1jof_A          143 ENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVI  222 (365)
T ss_dssp             TTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred             CCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEE
Confidence            345688999999999988874457899999998 66542  2333  23556788888  7888877765 689999987


Q ss_pred             cC--CCcc--cee---ee----cCCc------cEEEEE-EccCCcEEEEEe-c-C-----eEEEEECCCCCCCcccceee
Q psy14511        312 RT--HSDY--PTA---IT----REGD------VVCGLK-WSPNGRYLASGS-N-N-----TVKIWDFRQLDAKRPLGLIV  366 (488)
Q Consensus       312 ~~--~~~~--~~~---~~----~~~~------~i~~~~-~s~~~~~l~~~~-d-~-----~i~iwd~~~~~~~~~~~~~~  366 (488)
                      ..  ++..  ...   +.    ++..      .+..++ |+|||++|++++ + +     .|.+|++..           
T Consensus       223 ~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~-----------  291 (365)
T 1jof_A          223 DPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRD-----------  291 (365)
T ss_dssp             CTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECT-----------
T ss_pred             eCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECC-----------
Confidence            53  3211  011   11    1122      478899 999999887665 2 2     566665531           


Q ss_pred             eeecCCCCEEEEEccCCCCeEEEEeCCCcceeE---EEeeccccEEEEEEcC---CCCEEEEEeCC-CcEEEEecCCC
Q psy14511        367 PKLKREGRELVTSHGKQDCSLKMWEYPRLHLIE---ELKIHQERILSAVLSP---DQTCVAAASAD-ETISIWNCFPR  437 (488)
Q Consensus       367 ~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~---~~~~~~~~v~~~~~s~---~~~~l~t~~~d-g~v~iw~~~~~  437 (488)
                                                 +++...   ....+...+..++|+|   ||++|++++.+ +.|.+|+++..
T Consensus       292 ---------------------------~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~  342 (365)
T 1jof_A          292 ---------------------------CGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE  342 (365)
T ss_dssp             ---------------------------TSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred             ---------------------------CCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence                                       232221   1222444566789999   89999999865 89999999875

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.86  E-value=1.1e-19  Score=167.86  Aligned_cols=224  Identities=14%  Similarity=0.134  Sum_probs=156.4

Q ss_pred             CeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcC-------CCcc-----ccccccc
Q psy14511         15 GNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAK-------RPQV-----NNQCHLS   81 (488)
Q Consensus        15 g~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~-------~~~~-----~~~~h~~   81 (488)
                      +.+++|+....        .+...++.+++++++.+|++++ |+ ++||+.......       ..+.     ....|..
T Consensus        23 ~~vri~~~~~~--------~~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (434)
T 2oit_A           23 KKVRIFDSPEE--------LPKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKF   93 (434)
T ss_dssp             CEEECSCCCSS--------CCCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSS
T ss_pred             eeEEecCCccc--------cCCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCC
Confidence            56777764311        1233578999999999999998 65 999886532110       0000     0122556


Q ss_pred             ceeEEEEecCCCeEEe---eeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccce
Q psy14511         82 AVKAIAWCPWEPTLLA---TGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKV  158 (488)
Q Consensus        82 ~v~~l~~~~~~~~l~~---~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (488)
                      .|.+++|+|++++|++   +++.  |+.|++||+.++...     ....                               
T Consensus        94 ~v~~l~~spdg~~lav~~~sgs~--d~~v~iwd~~~~~~~-----~~~~-------------------------------  135 (434)
T 2oit_A           94 PIHHLALSCDNLTLSACMMSSEY--GSIIAFFDVRTFSNE-----AKQQ-------------------------------  135 (434)
T ss_dssp             CEEEEEECTTSCEEEEEEEETTT--EEEEEEEEHHHHHCT-----TCSS-------------------------------
T ss_pred             cccEEEEcCCCCEEEEEEeccCC--CceEEEEEccccccC-----CcCC-------------------------------
Confidence            7999999999998874   4543  999999998654100     0000                               


Q ss_pred             eccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCC
Q psy14511        159 LNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPT  238 (488)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~  238 (488)
                                                                                          .........+.+
T Consensus       136 --------------------------------------------------------------------~~~~~~~~~~~~  147 (434)
T 2oit_A          136 --------------------------------------------------------------------KRPFAYHKLLKD  147 (434)
T ss_dssp             --------------------------------------------------------------------CCCSEEEECCCS
T ss_pred             --------------------------------------------------------------------cceeeeeeccCC
Confidence                                                                                000000111222


Q ss_pred             CCCCceEEEEEcCC-CCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCC
Q psy14511        239 YDNAYISCVAWKPR-TTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHS  315 (488)
Q Consensus       239 ~~~~~i~~~~~~~~-~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~  315 (488)
                       |...|.+++|+|+ +..++++ +.||.|++||++++..+....+|...+.+++|  +|++|++|+.||.|++||.+ +.
T Consensus       148 -h~~~V~~v~~~p~~~~~las~-s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~  224 (434)
T 2oit_A          148 -AGGMVIDMKWNPTVPSMVAVC-LADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQ  224 (434)
T ss_dssp             -GGGSEEEEEECSSCTTEEEEE-ETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CC
T ss_pred             -CCCceEEEEECCCCCCEEEEE-ECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Cc
Confidence             7889999999998 6778878 99999999999998777677778999999999  78999999999999999998 22


Q ss_pred             ccceeeec-------CCccEEEEEEccCCcEEEEEe--cC------eEEEEECCCCC
Q psy14511        316 DYPTAITR-------EGDVVCGLKWSPNGRYLASGS--NN------TVKIWDFRQLD  357 (488)
Q Consensus       316 ~~~~~~~~-------~~~~i~~~~~s~~~~~l~~~~--d~------~i~iwd~~~~~  357 (488)
                       ....+..       |...+.+++|++++.++++.+  +|      .+++|++.+.+
T Consensus       225 -~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~  280 (434)
T 2oit_A          225 -EKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKE  280 (434)
T ss_dssp             -EEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTT
T ss_pred             -ccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCC
Confidence             2233322       334799999999998887654  22      38999998653

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.86  E-value=6.1e-19  Score=175.08  Aligned_cols=307  Identities=12%  Similarity=0.145  Sum_probs=192.5

Q ss_pred             eEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCccccccccc-----ceeEEEEecCCCeEEeeeCCcccceEEEEec
Q psy14511         38 VVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLS-----AVKAIAWCPWEPTLLATGGGICDQTVRLWNS  112 (488)
Q Consensus        38 ~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~-----~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~  112 (488)
                      ....++|+|||++|+++ |+.|++||+.+++...   .+.+|..     ....++|||||++|++...   ++.+  |..
T Consensus        18 ~~~~~~w~~dg~~~~~~-~~~i~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~---~~~~--~r~   88 (740)
T 4a5s_A           18 KLYSLRWISDHEYLYKQ-ENNILVFNAEYGNSSV---FLENSTFDEFGHSINDYSISPDGQFILLEYN---YVKQ--WRH   88 (740)
T ss_dssp             CCCCEEECSSSEEEEEE-TTEEEEEETTTCCEEE---EECTTTTTTCCSCCCEEEECTTSSEEEEEEE---EEEC--SSS
T ss_pred             cccccEECCCCcEEEEc-CCcEEEEECCCCceEE---EEechhhhhhcccccceEECCCCCEEEEEEC---Ceee--EEE
Confidence            35678999999999997 9999999999866432   2334432     2345899999998877764   4322  110


Q ss_pred             CCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecC
Q psy14511        113 MNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEA  192 (488)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (488)
                      .                                                                               
T Consensus        89 ~-------------------------------------------------------------------------------   89 (740)
T 4a5s_A           89 S-------------------------------------------------------------------------------   89 (740)
T ss_dssp             C-------------------------------------------------------------------------------
T ss_pred             c-------------------------------------------------------------------------------
Confidence            0                                                                               


Q ss_pred             CCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECC
Q psy14511        193 PSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQ  272 (488)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~  272 (488)
                                             ..+.+.+||+.+++...   +.. +...+..++|||||+.|+.+  .++.|++|+..
T Consensus        90 -----------------------~~~~~~~~d~~~~~~~~---l~~-~~~~~~~~~~SPdG~~la~~--~~~~i~~~~~~  140 (740)
T 4a5s_A           90 -----------------------YTASYDIYDLNKRQLIT---EER-IPNNTQWVTWSPVGHKLAYV--WNNDIYVKIEP  140 (740)
T ss_dssp             -----------------------EEEEEEEEETTTTEECC---SSC-CCTTEEEEEECSSTTCEEEE--ETTEEEEESST
T ss_pred             -----------------------cceEEEEEECCCCcEEE---ccc-CCCcceeeEECCCCCEEEEE--ECCeEEEEECC
Confidence                                   01234455555544322   222 55678899999999999888  56899999998


Q ss_pred             cceeeeee-ccccccE-----------------EEEEe--cCCEEEEeecCC----------------------------
Q psy14511        273 EERLIQKL-RTHMHQV-----------------IAMCW--NGNLLSCGTIGG----------------------------  304 (488)
Q Consensus       273 ~~~~~~~~-~~~~~~v-----------------~~~~~--~~~~l~~~~~dg----------------------------  304 (488)
                      +++..+.. .++...+                 .++.|  ||+.|+..+.|.                            
T Consensus       141 ~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~  220 (740)
T 4a5s_A          141 NLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPK  220 (740)
T ss_dssp             TSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCB
T ss_pred             CCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCC
Confidence            77654322 2222222                 23556  888888775321                            


Q ss_pred             --------eEEEEECcC---CCc-cceeee------cCCccEEEEEEccCCcEEEEEec-----CeEEEEECCCCC----
Q psy14511        305 --------NILHYDVRT---HSD-YPTAIT------REGDVVCGLKWSPNGRYLASGSN-----NTVKIWDFRQLD----  357 (488)
Q Consensus       305 --------~i~i~d~~~---~~~-~~~~~~------~~~~~i~~~~~s~~~~~l~~~~d-----~~i~iwd~~~~~----  357 (488)
                              .|++||+.+   +.. ....+.      .+...+..++|+|||+.++....     ..|.+||+.+++    
T Consensus       221 ~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~  300 (740)
T 4a5s_A          221 AGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWN  300 (740)
T ss_dssp             TTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEE
T ss_pred             CcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccc
Confidence                    588899887   521 122232      37778999999999997776542     479999998875    


Q ss_pred             CC--ccc-----c-------eeeeeecCCCCEEE-EEccCCC--CeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEE
Q psy14511        358 AK--RPL-----G-------LIVPKLKREGRELV-TSHGKQD--CSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCV  420 (488)
Q Consensus       358 ~~--~~~-----~-------~~~~~~~~~~~~l~-~~~g~~~--~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l  420 (488)
                      ..  ..+     .       .....|+|||+.++ .. ...+  ..|++||+.+++.. .+....-.+..+.. +|++.|
T Consensus       301 ~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~-s~~~G~~~l~~~~~~~~~~~-~lT~g~~~v~~~~~-~d~~~i  377 (740)
T 4a5s_A          301 CLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKII-SNEEGYRHICYFQIDKKDCT-FITKGTWEVIGIEA-LTSDYL  377 (740)
T ss_dssp             ECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEE-ECTTSCEEEEEEETTCSSCE-ESCCSSSCEEEEEE-ECSSEE
T ss_pred             eeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEE-EcCCCceEEEEEECCCCceE-ecccCCEEEEEEEE-EeCCEE
Confidence            11  111     0       11348999999887 43 2333  46888898876654 34434455665542 456666


Q ss_pred             EEEeCC-----C--cEEEEecCCCCcc-ccc----cccCCcceEEeecCCCceEEE
Q psy14511        421 AAASAD-----E--TISIWNCFPRDKK-RKA----RQVGSGSSLEFAILKQPVSLT  464 (488)
Q Consensus       421 ~t~~~d-----g--~v~iw~~~~~~~~-~~~----~~~~~v~~~~~s~~~~~~~~~  464 (488)
                      +..+..     +  .|+..++..++.. .+.    ..........|||+++.+.+.
T Consensus       378 ~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~  433 (740)
T 4a5s_A          378 YYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLR  433 (740)
T ss_dssp             EEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEE
T ss_pred             EEEEecCCCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEE
Confidence            554433     3  4555555544332 121    123567889999999977554

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.85  E-value=2.9e-18  Score=155.53  Aligned_cols=239  Identities=13%  Similarity=0.142  Sum_probs=156.8

Q ss_pred             ccCCceEEEeecC----CeEEEEEcccC-cccc--eeecccCceEEEEEEccCCcEEEEec--CCeEEEEeccccCcCCC
Q psy14511          2 CWNGNLLSCGTIG----GNILHYDVRTH-SDYP--TAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAKRP   72 (488)
Q Consensus         2 ~~dg~~la~g~~d----g~i~iwd~~~~-~~~~--~~~~~h~~~V~~l~~sp~g~~las~~--d~~i~vwd~~~~~~~~~   72 (488)
                      +.||++|++++.+    +.|.+|++... ..+.  .....+......+++  ++++|++++  ++.|.+|++........
T Consensus        58 spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~  135 (361)
T 3scy_A           58 SADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLP  135 (361)
T ss_dssp             CTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCS
T ss_pred             CCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcc
Confidence            3489999988875    79999998764 2121  122335556777888  888887775  89999999975332222


Q ss_pred             cccc-----------cccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCee------eeeeecCCCccccccccc
Q psy14511         73 QVNN-----------QCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKE------KCHVKTDSQQANDETISY  135 (488)
Q Consensus        73 ~~~~-----------~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~------~~~~~~~~~~~~~~~~~~  135 (488)
                      +...           ..+...+.+++|+|||+++++++..  ++.+.+|++.....      +... .            
T Consensus       136 ~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~--~~~v~v~~~~~~~~~~~~~~l~~~-~------------  200 (361)
T 3scy_A          136 ASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLG--TDQIHKFNINPNANADNKEKFLTK-G------------  200 (361)
T ss_dssp             CSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETT--TTEEEEEEECTTCCTTTCCCCEEE-E------------
T ss_pred             cceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCC--CCEEEEEEEcCCCCcccccceeec-c------------
Confidence            2111           1123346889999999988887764  88999999864331      0000 0            


Q ss_pred             cccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEE
Q psy14511        136 REQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVA  215 (488)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (488)
                                                                                                      
T Consensus       201 --------------------------------------------------------------------------------  200 (361)
T 3scy_A          201 --------------------------------------------------------------------------------  200 (361)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCccee--eeee---ccccccEEEE
Q psy14511        216 LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERL--IQKL---RTHMHQVIAM  290 (488)
Q Consensus       216 ~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~--~~~~---~~~~~~v~~~  290 (488)
                                    ........  ....+..++|+|+|+++++++..++.|.+|++.+++.  +..+   ..+......+
T Consensus       201 --------------~~~~~~~~--~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i  264 (361)
T 3scy_A          201 --------------TPEAFKVA--PGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDI  264 (361)
T ss_dssp             --------------EEEEEECC--TTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEE
T ss_pred             --------------cccceecC--CCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccE
Confidence                          00011111  3345678999999999888845799999999986643  2222   2233456778


Q ss_pred             Ee--cCCEEEEeecC--CeEEEEECcC--CC-ccceeeecCCccEEEEEEccCCcEEEEEe-c-CeEEEEECC
Q psy14511        291 CW--NGNLLSCGTIG--GNILHYDVRT--HS-DYPTAITREGDVVCGLKWSPNGRYLASGS-N-NTVKIWDFR  354 (488)
Q Consensus       291 ~~--~~~~l~~~~~d--g~i~i~d~~~--~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d-~~i~iwd~~  354 (488)
                      +|  ++++|+++..+  +.|.+|++..  +. .....+.. ...+..++|+|+|++|++++ + +.+.+|++.
T Consensus       265 ~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d  336 (361)
T 3scy_A          265 HLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERD  336 (361)
T ss_dssp             EECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEEC
T ss_pred             EECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEE
Confidence            88  78888776654  8999999962  22 12222333 44577899999999888886 3 777776554

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.85  E-value=1.6e-20  Score=186.49  Aligned_cols=267  Identities=13%  Similarity=0.119  Sum_probs=171.6

Q ss_pred             EEEEccCCcEEEEecCCeEEEEeccccCcCCCccccccccc---ceeEEEEecCCCeEEeeeCC------cccceEEEEe
Q psy14511         41 GLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLS---AVKAIAWCPWEPTLLATGGG------ICDQTVRLWN  111 (488)
Q Consensus        41 ~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~---~v~~l~~~~~~~~l~~~~~~------~~d~~i~vwd  111 (488)
                      .++|+|||++++++.|+.|++||+.+++...   .+.+|..   .+.+++|||||++|+++...      +.++.|++||
T Consensus        20 ~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d   96 (719)
T 1z68_A           20 FPNWISGQEYLHQSADNNIVLYNIETGQSYT---ILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYD   96 (719)
T ss_dssp             CCEESSSSEEEEECTTSCEEEEESSSCCEEE---EECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred             ccEECCCCeEEEEcCCCCEEEEEcCCCcEEE---EEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEE
Confidence            6899999988887779999999998865332   2333433   48999999999988776531      0146777777


Q ss_pred             cCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeec
Q psy14511        112 SMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILE  191 (488)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (488)
                      +.+++.+.                                                                        
T Consensus        97 ~~~g~~~~------------------------------------------------------------------------  104 (719)
T 1z68_A           97 LSNGEFVR------------------------------------------------------------------------  104 (719)
T ss_dssp             TTTTEECC------------------------------------------------------------------------
T ss_pred             CCCCcccc------------------------------------------------------------------------
Confidence            76654210                                                                        


Q ss_pred             CCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEEC
Q psy14511        192 APSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHE  271 (488)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~  271 (488)
                                                               ...    ....+..++|+|||+.|+++  .++.|++|++
T Consensus       105 -----------------------------------------~~~----l~~~~~~~~~SPDG~~la~~--~~~~i~~~~~  137 (719)
T 1z68_A          105 -----------------------------------------GNE----LPRPIQYLCWSPVGSKLAYV--YQNNIYLKQR  137 (719)
T ss_dssp             -----------------------------------------SSC----CCSSBCCEEECSSTTCEEEE--ETTEEEEESS
T ss_pred             -----------------------------------------cee----cCcccccceECCCCCEEEEE--ECCeEEEEeC
Confidence                                                     000    11246778999999999988  4789999999


Q ss_pred             Ccceeeeee-ccccccE-----------------EEEEe--cCCEEEEeecCC---------------------------
Q psy14511        272 QEERLIQKL-RTHMHQV-----------------IAMCW--NGNLLSCGTIGG---------------------------  304 (488)
Q Consensus       272 ~~~~~~~~~-~~~~~~v-----------------~~~~~--~~~~l~~~~~dg---------------------------  304 (488)
                      .+++..... .++...+                 .+++|  ||+.|++++.|.                           
T Consensus       138 ~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~  217 (719)
T 1z68_A          138 PGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKA  217 (719)
T ss_dssp             TTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBT
T ss_pred             CCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCC
Confidence            887665433 2232222                 36777  899999887652                           


Q ss_pred             -------eEEEEECcCCCcc--c-----eeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccceeeeeec
Q psy14511        305 -------NILHYDVRTHSDY--P-----TAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLK  370 (488)
Q Consensus       305 -------~i~i~d~~~~~~~--~-----~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~  370 (488)
                             .|++||+.++...  .     ..+..|...+..++|+||++++++..+.                        
T Consensus       218 g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~------------------------  273 (719)
T 1z68_A          218 GAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKR------------------------  273 (719)
T ss_dssp             TSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEES------------------------
T ss_pred             CCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEecc------------------------
Confidence                   7888998765321  0     1133577778899999998776664320                        


Q ss_pred             CCCCEEEEEccCCCCeEEEEe----CCCcceeEEE----eeccccEE-----EEEEcCCCCEEEE--EeCCC--cEEEEe
Q psy14511        371 REGRELVTSHGKQDCSLKMWE----YPRLHLIEEL----KIHQERIL-----SAVLSPDQTCVAA--ASADE--TISIWN  433 (488)
Q Consensus       371 ~~~~~l~~~~g~~~~~i~i~d----~~~~~~~~~~----~~~~~~v~-----~~~~s~~~~~l~t--~~~dg--~v~iw~  433 (488)
                                +.....|.+||    +.+++....+    .+|...+.     .++|+|||+.|+.  ...+|  .|.+|+
T Consensus       274 ----------~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~  343 (719)
T 1z68_A          274 ----------VQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIK  343 (719)
T ss_dssp             ----------STTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEES
T ss_pred             ----------ccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEE
Confidence                      00112234444    3444333333    34555565     7899999996654  44555  577778


Q ss_pred             cCCCCccccccccCCcceEEeecCCCceEEE
Q psy14511        434 CFPRDKKRKARQVGSGSSLEFAILKQPVSLT  464 (488)
Q Consensus       434 ~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~  464 (488)
                      +.+++...+..+...+..+.++ +++.+.+.
T Consensus       344 ~~~~~~~~lt~~~~~v~~~~~~-d~~~i~~~  373 (719)
T 1z68_A          344 DTVENAIQITSGKWEAINIFRV-TQDSLFYS  373 (719)
T ss_dssp             SCSTTCEECSCSSSCEEEEEEE-CSSEEEEE
T ss_pred             CCCCceEecccCceEEEEEEEE-eCCEEEEE
Confidence            8777655555555556677777 66666443

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.85  E-value=1.1e-18  Score=157.34  Aligned_cols=295  Identities=8%  Similarity=0.030  Sum_probs=189.7

Q ss_pred             cCCceEEEee------cCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-----------CCeEEEEecc
Q psy14511          3 WNGNLLSCGT------IGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-----------NNTVKIWDFR   65 (488)
Q Consensus         3 ~dg~~la~g~------~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-----------d~~i~vwd~~   65 (488)
                      ++++++.+..      .|+.|.+||..+++.+ ..+..+..+  .++|+|||++|+++.           ++.|.+||..
T Consensus        13 ~~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~-~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~   89 (361)
T 2oiz_A           13 PQENRIYVMDSVFMHLTESRVHVYDYTNGKFL-GMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDAD   89 (361)
T ss_dssp             CGGGEEEEEECCGGGGGGCEEEEEETTTCCEE-EEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETT
T ss_pred             CCCCEEEEECCCCCccccCeEEEEECCCCeEE-EEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECc
Confidence            3677766543      4779999999988754 445555555  899999999988874           5679999998


Q ss_pred             ccCcCCCcccccc---cccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeee-eecCCCccccccccccccccc
Q psy14511         66 QLDAKRPQVNNQC---HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCH-VKTDSQQANDETISYREQKKR  141 (488)
Q Consensus        66 ~~~~~~~~~~~~~---h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  141 (488)
                      +.+....+.....   +......++|+|||++|+++... .+++|.+||+.+++.+.. +.......  ..+.+      
T Consensus        90 t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~-~~~~v~v~d~~~~~~~~~~i~~~~~~~--v~~~p------  160 (361)
T 2oiz_A           90 KLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNAS-PATSIGIVDVAKGDYVEDVTAAAGCWS--VIPQP------  160 (361)
T ss_dssp             TCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEES-SSEEEEEEETTTTEEEEEEGGGTTEEE--EEECT------
T ss_pred             CCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCC-CCCeEEEEECCCCcEEEEEecCCCcce--eEEcC------
Confidence            7554333322111   22456789999999998887641 168999999999877655 33220000  00000      


Q ss_pred             eeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEE
Q psy14511        142 RHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVY  221 (488)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~  221 (488)
                                                                                      .....+++.+.||.+.
T Consensus       161 ----------------------------------------------------------------~~~~~~~~~~~dg~~~  176 (361)
T 2oiz_A          161 ----------------------------------------------------------------NRPRSFMTICGDGGLL  176 (361)
T ss_dssp             ----------------------------------------------------------------TSSSEEEEEETTSSEE
T ss_pred             ----------------------------------------------------------------CCCeeEEEECCCCcEE
Confidence                                                                            0013467777899999


Q ss_pred             EEECCC-CceEEEEe----cCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCccee--eeeecc------------
Q psy14511        222 TWNTKT-NKTQLLVE----YPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERL--IQKLRT------------  282 (488)
Q Consensus       222 iw~~~~-~~~~~~~~----~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~--~~~~~~------------  282 (488)
                      +|+... ++......    +.. ...++ .+.+++++..++.. +.++.+.++|+.....  ...+..            
T Consensus       177 ~v~~~~~g~~~~~~~~~~~~~~-~~~~~-~~~~~~~g~~~~~~-~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p  253 (361)
T 2oiz_A          177 TINLGEDGKVASQSRSKQMFSV-KDDPI-FIAPALDKDKAHFV-SYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVP  253 (361)
T ss_dssp             EEEECTTSSEEEEEECCCCSCT-TTSCB-CSCCEECSSEEEEE-BTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEE
T ss_pred             EEEECCCCcEeeeccccceEcC-CCCce-EEEecccCCEEEEE-eCCCeEEEEEecCCCceecccccccCcccccccccc
Confidence            998865 44432211    111 12222 33446777777777 7889999999865421  111110            


Q ss_pred             ccccEEEEEecCCEEEEeec-----------CCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEE
Q psy14511        283 HMHQVIAMCWNGNLLSCGTI-----------GGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIW  351 (488)
Q Consensus       283 ~~~~v~~~~~~~~~l~~~~~-----------dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iw  351 (488)
                      ......++..+++.++++..           .+.|.+||+.+. +.+..+..+.  +.+++|+|||++|+++++      
T Consensus       254 ~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~-~~v~~i~~~~--p~~ia~spdg~~l~v~n~------  324 (361)
T 2oiz_A          254 GGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTK-QRVARIPGRD--ALSMTIDQQRNLMLTLDG------  324 (361)
T ss_dssp             CCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTT-EEEEEEECTT--CCEEEEETTTTEEEEECS------
T ss_pred             CCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCC-cEEEEEecCC--eeEEEECCCCCEEEEeCC------
Confidence            00111344446676666543           348999999886 4566666665  888999999998876632      


Q ss_pred             ECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCc--ceeEEEeeccccEEEEEEcCCCC
Q psy14511        352 DFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRL--HLIEELKIHQERILSAVLSPDQT  418 (488)
Q Consensus       352 d~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~--~~~~~~~~~~~~v~~~~~s~~~~  418 (488)
                                                       +.|.+||..++  +.+.++..+......++++|||+
T Consensus       325 ---------------------------------~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~  360 (361)
T 2oiz_A          325 ---------------------------------GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG  360 (361)
T ss_dssp             ---------------------------------SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred             ---------------------------------CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence                                             66777777777  77777766667788899999986

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.84  E-value=1.3e-18  Score=157.19  Aligned_cols=262  Identities=9%  Similarity=-0.020  Sum_probs=172.3

Q ss_pred             cEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecccc-----
Q psy14511        210 DTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHM-----  284 (488)
Q Consensus       210 ~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~-----  284 (488)
                      .+++++.++.|++||..+++....+...  ....+..++|+|+++.+++++..++.|.+||+.+++....+....     
T Consensus        13 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~--~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~   90 (349)
T 1jmx_B           13 YMIVTNYPNNLHVVDVASDTVYKSCVMP--DKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEV   90 (349)
T ss_dssp             EEEEEETTTEEEEEETTTTEEEEEEECS--SCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEE
T ss_pred             EEEEeCCCCeEEEEECCCCcEEEEEecC--CCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccc
Confidence            4556679999999999999887776643  222577899999999877665788999999999988877665322     


Q ss_pred             -ccEEEEEe--cCCEEEEeecC------------CeEEEEECcCCCc--cceeeecCCccEEEEEEccCCcEEEEEecCe
Q psy14511        285 -HQVIAMCW--NGNLLSCGTIG------------GNILHYDVRTHSD--YPTAITREGDVVCGLKWSPNGRYLASGSNNT  347 (488)
Q Consensus       285 -~~v~~~~~--~~~~l~~~~~d------------g~i~i~d~~~~~~--~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~  347 (488)
                       ..+..+++  +++.+++++.+            +.|.+||+.+++.  ...... +...+.+++|+|+|+ ++++ ++.
T Consensus        91 ~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~-~~~  167 (349)
T 1jmx_B           91 GRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYVA-GPD  167 (349)
T ss_dssp             EECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEEE-SSS
T ss_pred             cccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-EEEc-cCc
Confidence             22556666  78899988865            8999999987432  222233 333578899999999 5544 445


Q ss_pred             EEEEECCCCCCCcccceee-----------------------------eeecCCCCEEEEEccCCCCeEEEEeCCCccee
Q psy14511        348 VKIWDFRQLDAKRPLGLIV-----------------------------PKLKREGRELVTSHGKQDCSLKMWEYPRLHLI  398 (488)
Q Consensus       348 i~iwd~~~~~~~~~~~~~~-----------------------------~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~  398 (488)
                      |.+||+.+++....+....                             ..+++++...... ......+..+|..+++..
T Consensus       168 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~  246 (349)
T 1jmx_B          168 IYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPAT-ADLLYGYLSVDLKTGKTH  246 (349)
T ss_dssp             EEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CC-CEEEEEEEEEETTTCCEE
T ss_pred             EEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccc-cccceeEEEEeccCCcEE
Confidence            9999998775433221110                             0122221100000 000011222455554421


Q ss_pred             -EEEeeccccEEEEEEcC-CCCEEEEEeCCCcEEEEecCCCCccccccccCCcceEEeecCCCceEEEEeeeccccccee
Q psy14511        399 -EELKIHQERILSAVLSP-DQTCVAAASADETISIWNCFPRDKKRKARQVGSGSSLEFAILKQPVSLTALLRSRAVEKQQ  476 (488)
Q Consensus       399 -~~~~~~~~~v~~~~~s~-~~~~l~t~~~dg~v~iw~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~  476 (488)
                       ..+..+...+..++|+| |+++++++  ++.|.+||+.+++..........+.+++|+|+++.+...       ..+..
T Consensus       247 ~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-------~~~~~  317 (349)
T 1jmx_B          247 TQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLG-------GTFND  317 (349)
T ss_dssp             EEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECSSSSCEEEE-------SBSSE
T ss_pred             ecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCCCccceEECCCCCEEEEe-------cCCCe
Confidence             22334556789999999 99999988  889999999998877665556678899999999887442       22345


Q ss_pred             eEEEEeeccc
Q psy14511        477 HAIAYTVFGE  486 (488)
Q Consensus       477 ~~i~~~~~g~  486 (488)
                      +.++..++++
T Consensus       318 v~v~d~~~~~  327 (349)
T 1jmx_B          318 LAVFNPDTLE  327 (349)
T ss_dssp             EEEEETTTTE
T ss_pred             EEEEeccccc
Confidence            5556555554

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.83  E-value=1.4e-16  Score=150.61  Aligned_cols=327  Identities=13%  Similarity=0.079  Sum_probs=217.2

Q ss_pred             CceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEecc--ccCcCCCccccccccc
Q psy14511          5 GNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFR--QLDAKRPQVNNQCHLS   81 (488)
Q Consensus         5 g~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~--~~~~~~~~~~~~~h~~   81 (488)
                      +.++++...+++|.++|..+++.+.. +.. ...+..+.|||||++|++++ |+.|.+||+.  +.+   .+..+.. ..
T Consensus       167 ~~~~V~~~~~~~V~viD~~t~~v~~~-i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~---~v~~i~~-G~  240 (567)
T 1qks_A          167 NLFSVTLRDAGQIALIDGSTYEIKTV-LDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPT---TVAEIKI-GS  240 (567)
T ss_dssp             GEEEEEETTTTEEEEEETTTCCEEEE-EEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCC---EEEEEEC-CS
T ss_pred             ceEEEEeCCCCeEEEEECCCCeEEEE-EeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCc---EeEEEec-CC
Confidence            45666777899999999999885543 332 23467899999999999888 8999999995  433   2223322 23


Q ss_pred             ceeEEEEe----cCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccc
Q psy14511         82 AVKAIAWC----PWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKK  157 (488)
Q Consensus        82 ~v~~l~~~----~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (488)
                      ....++|+    |||++++++...  ++++.++|..+.+.+..+...........+.+.+                    
T Consensus       241 ~P~~ia~s~~~~pDGk~l~v~n~~--~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~--------------------  298 (567)
T 1qks_A          241 EARSIETSKMEGWEDKYAIAGAYW--PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEP--------------------  298 (567)
T ss_dssp             EEEEEEECCSTTCTTTEEEEEEEE--TTEEEEEETTTCCEEEEEECCEECTTTCCEESCC--------------------
T ss_pred             CCceeEEccccCCCCCEEEEEEcc--CCeEEEEECCCCcEEEEEeccccccccccccCCC--------------------
Confidence            46789999    699999988873  8999999999988877665431111000000000                    


Q ss_pred             eeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC--CCc-EEEEECCCeEEEEECCCCceEEEE
Q psy14511        158 VLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG--YHD-TLAVALDTSVYTWNTKTNKTQLLV  234 (488)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~d~~v~iw~~~~~~~~~~~  234 (488)
                                                                .+..+..+  ... ++....+|.|.++|....+.....
T Consensus       299 ------------------------------------------rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~  336 (567)
T 1qks_A          299 ------------------------------------------RVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTT  336 (567)
T ss_dssp             ------------------------------------------CEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEE
T ss_pred             ------------------------------------------ceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceee
Confidence                                                      00001111  112 333347799999999876544444


Q ss_pred             ecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecc-----ccccEEEE-EecC-CEEEEee-cCCeE
Q psy14511        235 EYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRT-----HMHQVIAM-CWNG-NLLSCGT-IGGNI  306 (488)
Q Consensus       235 ~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~-----~~~~v~~~-~~~~-~~l~~~~-~dg~i  306 (488)
                      .+.  .......+.|+|+++++++++..++.|.++|+.+++.+..+..     |.+.-..+ ..++ ...++.. .++.|
T Consensus       337 ~i~--~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~V  414 (567)
T 1qks_A          337 EIS--AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSV  414 (567)
T ss_dssp             EEE--CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEE
T ss_pred             eee--ccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeE
Confidence            433  3456778999999999988867789999999999887766543     33222222 2243 4444443 46899


Q ss_pred             EEEECcCCC------ccceeeecCCccEEEEEEccCCcEEEEEe--------cCeEEEEECCCC-----CCC-cccc---
Q psy14511        307 LHYDVRTHS------DYPTAITREGDVVCGLKWSPNGRYLASGS--------NNTVKIWDFRQL-----DAK-RPLG---  363 (488)
Q Consensus       307 ~i~d~~~~~------~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--------d~~i~iwd~~~~-----~~~-~~~~---  363 (488)
                      .++|....+      +.+..+......-..+..+|++++|.+..        .+.|.++|+.+.     ... ..+.   
T Consensus       415 svid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~  494 (567)
T 1qks_A          415 ALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAE  494 (567)
T ss_dssp             EEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHH
T ss_pred             EEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEecccc
Confidence            999988632      23444444333334477899999998866        249999999877     211 1111   


Q ss_pred             ----------eeeeeecCCCCEEEEEccC---CCCeEEEEeCCCcceeEEEee
Q psy14511        364 ----------LIVPKLKREGRELVTSHGK---QDCSLKMWEYPRLHLIEELKI  403 (488)
Q Consensus       364 ----------~~~~~~~~~~~~l~~~~g~---~~~~i~i~d~~~~~~~~~~~~  403 (488)
                                .....|+++|+++.++...   .++.|.++|.++++++.++..
T Consensus       495 ~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~  547 (567)
T 1qks_A          495 WAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKHVIKD  547 (567)
T ss_dssp             HHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECC
T ss_pred             ccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCceEEEEeCC
Confidence                      1122899999999886432   479999999999999888764

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.81  E-value=2.2e-18  Score=158.57  Aligned_cols=330  Identities=11%  Similarity=0.057  Sum_probs=186.0

Q ss_pred             EEEEcccCcccceeecccCc-----eEEEEEEccCCcEEEEec----CCeEEEEeccccCcCCCcccccccccceeEEEE
Q psy14511         18 LHYDVRTHSDYPTAITREGD-----VVCGLKWSPNGRYLASGS----NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAW   88 (488)
Q Consensus        18 ~iwd~~~~~~~~~~~~~h~~-----~V~~l~~sp~g~~las~~----d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~   88 (488)
                      ...|..+++.+ ..+..+..     .+..++|||||++|+...    +..|.+||+.+++... +  ..++......+.|
T Consensus        13 ~~~d~~~g~~~-~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~-l--~~~~~~~~~~~~~   88 (396)
T 3c5m_A           13 TFVDSDTQVKV-TRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQ-L--TEGKGDNTFGGFI   88 (396)
T ss_dssp             EEECTTTCCEE-EECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEE-C--CCSSCBCTTTCEE
T ss_pred             eeecCCCCcce-EEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEE-e--ecCCCCccccceE
Confidence            35577777644 34444433     377889999999988875    3478889988754322 1  1222222334789


Q ss_pred             ecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccc
Q psy14511         89 CPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSP  168 (488)
Q Consensus        89 ~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (488)
                      +|||++|+++..   ++.|.+||+.+++.......+..      +.+                   .+..+.+.......
T Consensus        89 spdg~~l~~~~~---~~~l~~~d~~~~~~~~~~~~~~~------~~~-------------------~g~~l~~~~~~~~~  140 (396)
T 3c5m_A           89 STDERAFFYVKN---ELNLMKVDLETLEEQVIYTVDEE------WKG-------------------YGTWVANSDCTKLV  140 (396)
T ss_dssp             CTTSSEEEEEET---TTEEEEEETTTCCEEEEEECCTT------EEE-------------------EEEEEECTTSSEEE
T ss_pred             CCCCCEEEEEEc---CCcEEEEECCCCCcEEEEecccc------cCC-------------------CCCEEEeccCCccc
Confidence            999999888886   77999999988875544332211      000                   01111111100000


Q ss_pred             eeeecccccccccccCCCceeecCCCccccceeeeeeeC--CCcEEEE-----ECCCeEEEEECCCCceEEEEecCCCCC
Q psy14511        169 TQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG--YHDTLAV-----ALDTSVYTWNTKTNKTQLLVEYPTYDN  241 (488)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-----~~d~~v~iw~~~~~~~~~~~~~~~~~~  241 (488)
                      ...                             .....++  ...++..     ..+..|++||+.+++...+..    +.
T Consensus       141 ~~~-----------------------------~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~----~~  187 (396)
T 3c5m_A          141 GIE-----------------------------ILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQ----DT  187 (396)
T ss_dssp             EEE-----------------------------EEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEE----ES
T ss_pred             ccc-----------------------------ccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeecc----CC
Confidence            000                             0000111  1111111     245689999999988766553    45


Q ss_pred             CceEEEEEcC-CCCeEEEEeCCC------CcEEEEECCcceeeeeeccc-cccEEEEEe--cCCEEEEeecC-----CeE
Q psy14511        242 AYISCVAWKP-RTTDLAVTNTCT------EYIDLWHEQEERLIQKLRTH-MHQVIAMCW--NGNLLSCGTIG-----GNI  306 (488)
Q Consensus       242 ~~i~~~~~~~-~~~~l~~~~~~~------~~i~i~d~~~~~~~~~~~~~-~~~v~~~~~--~~~~l~~~~~d-----g~i  306 (488)
                      ..+..+.|+| +++.++.. +.+      ..|.+||+..++........ ...+..+.|  +++.|+..+.+     +.|
T Consensus       188 ~~~~~~~~sp~dg~~l~~~-~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l  266 (396)
T 3c5m_A          188 AWLGHPIYRPFDDSTVGFC-HEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVI  266 (396)
T ss_dssp             SCEEEEEEETTEEEEEEEE-ECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEE
T ss_pred             cccccceECCCCCCEEEEE-ecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceE
Confidence            6788999999 78877776 333      46888898765433333321 235677777  78877766544     449


Q ss_pred             EEEECcCCCccceeeecCCccEEEEEEcc-CCcEEEEEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCC
Q psy14511        307 LHYDVRTHSDYPTAITREGDVVCGLKWSP-NGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDC  385 (488)
Q Consensus       307 ~i~d~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~  385 (488)
                      ++||+.++..  ..+..... .. +.|+| +|+++++++...-  +.....                 .. ..  ...+.
T Consensus       267 ~~~d~~~g~~--~~l~~~~~-~~-~~~s~~dg~~l~~~~~~~p--~~~~~~-----------------~~-~~--~~~~~  320 (396)
T 3c5m_A          267 YKANPETLEN--EEVMVMPP-CS-HLMSNFDGSLMVGDGCDAP--VDVADA-----------------DS-YN--IENDP  320 (396)
T ss_dssp             EEECTTTCCE--EEEEECCS-EE-EEEECSSSSEEEEEECCC------------------------------C--CCCCC
T ss_pred             EEEECCCCCe--EEeeeCCC-CC-CCccCCCCceEEEecCCcc--eeeccc-----------------cc-cc--cCCCC
Confidence            9999987542  22222222 33 88999 9998876542100  000000                 00 00  12346


Q ss_pred             eEEEEeCCCcceeEEEeeccc-----------cEEEEEEcCCCCEEEEEeC-CCcEEEE--ecCCCCcc
Q psy14511        386 SLKMWEYPRLHLIEELKIHQE-----------RILSAVLSPDQTCVAAASA-DETISIW--NCFPRDKK  440 (488)
Q Consensus       386 ~i~i~d~~~~~~~~~~~~~~~-----------~v~~~~~s~~~~~l~t~~~-dg~v~iw--~~~~~~~~  440 (488)
                      .|++||+.+++. ..+..+..           .+..++|+|||+.|+.++. ++...+|  ++.+++..
T Consensus       321 ~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~~~  388 (396)
T 3c5m_A          321 FLYVLNTKAKSA-QKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESYKH  388 (396)
T ss_dssp             EEEEEETTTTBC-CEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTCC-
T ss_pred             cEEEEecccCce-EEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEcccccc
Confidence            677788776654 33444443           2567899999999887765 4554555  44555443

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.81  E-value=2.2e-16  Score=149.31  Aligned_cols=222  Identities=9%  Similarity=-0.011  Sum_probs=157.6

Q ss_pred             ceEEEEEc----CCCCeEEEEeCCCCcEEEEECCcceeeeeeccc-----------cccEEEEEe--c-CCEEEEeecCC
Q psy14511        243 YISCVAWK----PRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTH-----------MHQVIAMCW--N-GNLLSCGTIGG  304 (488)
Q Consensus       243 ~i~~~~~~----~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~-----------~~~v~~~~~--~-~~~l~~~~~dg  304 (488)
                      ....++|+    |+|+++++++..++.+.++|..+.+.+..+...           ...+..+..  + ..+++....+|
T Consensus       241 ~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g  320 (567)
T 1qks_A          241 EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETG  320 (567)
T ss_dssp             EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTT
T ss_pred             CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCC
Confidence            35688999    699999998777899999999998887776421           124566655  2 45666667789


Q ss_pred             eEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-c-CeEEEEECCCCCCCcccce-e--------eeeecCCC
Q psy14511        305 NILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-N-NTVKIWDFRQLDAKRPLGL-I--------VPKLKREG  373 (488)
Q Consensus       305 ~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d-~~i~iwd~~~~~~~~~~~~-~--------~~~~~~~~  373 (488)
                      .|.++|....................+.|+|+|++++++. . +.|.++|+.+++....+.. .        ...++|++
T Consensus       321 ~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~  400 (567)
T 1qks_A          321 KILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTF  400 (567)
T ss_dssp             EEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTT
T ss_pred             eEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCC
Confidence            9999998765422222223344567889999999988877 3 9999999998865443332 1        11357876


Q ss_pred             CEEEEEccCCCCeEEEEeCCC-------cceeEEEeeccccEEEEEEcCCCCEEEEEeC-------CCcEEEEecCCC--
Q psy14511        374 RELVTSHGKQDCSLKMWEYPR-------LHLIEELKIHQERILSAVLSPDQTCVAAASA-------DETISIWNCFPR--  437 (488)
Q Consensus       374 ~~l~~~~g~~~~~i~i~d~~~-------~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~-------dg~v~iw~~~~~--  437 (488)
                      ..++++....++.|.++|..+       .+.++++......-..+..+|++++|.+...       .+.|.++|+.+.  
T Consensus       401 g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~  480 (567)
T 1qks_A          401 GPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTG  480 (567)
T ss_dssp             EEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCC
T ss_pred             CcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccc
Confidence            666554344578999999987       6788888765444455788999999988663       359999999987  


Q ss_pred             ---Ccc--ccc--------cccCCcceEEeecCCCceEEE
Q psy14511        438 ---DKK--RKA--------RQVGSGSSLEFAILKQPVSLT  464 (488)
Q Consensus       438 ---~~~--~~~--------~~~~~v~~~~~s~~~~~~~~~  464 (488)
                         ...  ...        .....+..+.|+|+|+.+.++
T Consensus       481 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s  520 (567)
T 1qks_A          481 DGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFS  520 (567)
T ss_dssp             SSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEE
T ss_pred             cccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEE
Confidence               211  111        123467899999999998665

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.79  E-value=6.9e-17  Score=146.41  Aligned_cols=252  Identities=10%  Similarity=0.059  Sum_probs=162.9

Q ss_pred             cEEEEECC--CeEEEEEC--CCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECC-cceeeeeeccc-
Q psy14511        210 DTLAVALD--TSVYTWNT--KTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQ-EERLIQKLRTH-  283 (488)
Q Consensus       210 ~~~~~~~d--~~v~iw~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~-~~~~~~~~~~~-  283 (488)
                      .+++++..  +.|.+|++  .+++..............+..++|+|++++|+++ +.+ .|.+|++. +++........ 
T Consensus         4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~-~~~-~v~~~~~~~~g~~~~~~~~~~   81 (365)
T 1jof_A            4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGA-AMK-KWSSFAVKSPTEIVHEASHPI   81 (365)
T ss_dssp             EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEE-EBT-EEEEEEEEETTEEEEEEEEEC
T ss_pred             EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEE-ccc-eEEEEEECCCCCEEEeeEeec
Confidence            35566642  56877664  5666544333211033467789999999999888 555 99999987 66554332210 


Q ss_pred             cccEEEEEe--cCCE--EEEee-------------cCCeEEEEECcCCCccceeee----cCCccEEEEEEccCCcEEEE
Q psy14511        284 MHQVIAMCW--NGNL--LSCGT-------------IGGNILHYDVRTHSDYPTAIT----REGDVVCGLKWSPNGRYLAS  342 (488)
Q Consensus       284 ~~~v~~~~~--~~~~--l~~~~-------------~dg~i~i~d~~~~~~~~~~~~----~~~~~i~~~~~s~~~~~l~~  342 (488)
                      .+....+++  +++.  ++++.             .++.+.+|++.........+.    .+...+.+++|+|||++|++
T Consensus        82 ~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~  161 (365)
T 1jof_A           82 GGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYS  161 (365)
T ss_dssp             CSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEE
T ss_pred             CCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEE
Confidence            112233555  6773  44553             689999999974333322222    24567899999999998887


Q ss_pred             Ee--cCeEEEEECC-CCCCCc--ccc-------eeeeeecCCCCEEEEEccCCCCeEEEEeCC--Cccee---EEEe---
Q psy14511        343 GS--NNTVKIWDFR-QLDAKR--PLG-------LIVPKLKREGRELVTSHGKQDCSLKMWEYP--RLHLI---EELK---  402 (488)
Q Consensus       343 ~~--d~~i~iwd~~-~~~~~~--~~~-------~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~--~~~~~---~~~~---  402 (488)
                      +.  ++.|++||+. +++...  .+.       ....+|+|+|++++++ +..++.+.+|++.  +++..   ..+.   
T Consensus       162 ~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~-~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~  240 (365)
T 1jof_A          162 ADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYAL-MEAGNRICEYVIDPATHMPVYTHHSFPLIP  240 (365)
T ss_dssp             EETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEE-ETTTTEEEEEEECTTTCCEEEEEEEEESSC
T ss_pred             EcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEE-ECCCCeEEEEEEeCCCCcEEEccceEEcCC
Confidence            76  3899999998 554321  111       1112899999999875 4567899999764  56542   2222   


Q ss_pred             ----eccc------cEEEEE-EcCCCCEEEEEeCCC------cEEEEecC-CCCcccc---c-cccCCcceEEeec---C
Q psy14511        403 ----IHQE------RILSAV-LSPDQTCVAAASADE------TISIWNCF-PRDKKRK---A-RQVGSGSSLEFAI---L  457 (488)
Q Consensus       403 ----~~~~------~v~~~~-~s~~~~~l~t~~~dg------~v~iw~~~-~~~~~~~---~-~~~~~v~~~~~s~---~  457 (488)
                          +|..      .+..++ |+|||++|++++.+.      .|.+|++. +++....   . .+...+..++|+|   +
T Consensus       241 ~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~d  320 (365)
T 1jof_A          241 PGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWS  320 (365)
T ss_dssp             TTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTC
T ss_pred             CCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcC
Confidence                1222      588999 999999988766432      89999996 5554431   2 2345678899999   7


Q ss_pred             CCceEEE
Q psy14511        458 KQPVSLT  464 (488)
Q Consensus       458 ~~~~~~~  464 (488)
                      ++.+...
T Consensus       321 g~~l~v~  327 (365)
T 1jof_A          321 DEWMAIT  327 (365)
T ss_dssp             TTEEEEE
T ss_pred             CCEEEEE
Confidence            8877443

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.78  E-value=9e-16  Score=134.14  Aligned_cols=243  Identities=14%  Similarity=0.158  Sum_probs=160.7

Q ss_pred             cccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCccc---ccccccceeEEEEe-cCCCeEEeeeCCcccceE
Q psy14511         33 TREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVN---NQCHLSAVKAIAWC-PWEPTLLATGGGICDQTV  107 (488)
Q Consensus        33 ~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~---~~~h~~~v~~l~~~-~~~~~l~~~~~~~~d~~i  107 (488)
                      .+|-....+++++|+|+++++.. ++.|.+||... +....+..   ..+|...+..+++. +++. ++++... .++.|
T Consensus        26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g-~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~-l~v~~~~-~~~~i  102 (286)
T 1q7f_A           26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEG-RFKFQFGECGKRDSQLLYPNRVAVVRNSGD-IIVTERS-PTHQI  102 (286)
T ss_dssp             TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTS-CEEEEECCBSSSTTCBSSEEEEEEETTTTE-EEEEECG-GGCEE
T ss_pred             CCccCCCceEEECCCCCEEEEECCCCEEEEECCCC-cEEEEecccCCCcccccCceEEEEEcCCCe-EEEEcCC-CCCEE
Confidence            35566789999999999888876 89999999763 32211111   12345678899994 5664 4444420 16788


Q ss_pred             EEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCc
Q psy14511        108 RLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPE  187 (488)
Q Consensus       108 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (488)
                      .+|| .+++.+..+.                                                                 
T Consensus       103 ~~~d-~~g~~~~~~~-----------------------------------------------------------------  116 (286)
T 1q7f_A          103 QIYN-QYGQFVRKFG-----------------------------------------------------------------  116 (286)
T ss_dssp             EEEC-TTSCEEEEEC-----------------------------------------------------------------
T ss_pred             EEEC-CCCcEEEEec-----------------------------------------------------------------
Confidence            8888 4444321110                                                                 


Q ss_pred             eeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEE
Q psy14511        188 RILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYID  267 (488)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~  267 (488)
                                                                      . . ....+.+++++|+++.+++. ..++.|.
T Consensus       117 ------------------------------------------------~-~-~~~~~~~i~~~~~g~l~v~~-~~~~~i~  145 (286)
T 1q7f_A          117 ------------------------------------------------A-T-ILQHPRGVTVDNKGRIIVVE-CKVMRVI  145 (286)
T ss_dssp             ------------------------------------------------T-T-TCSCEEEEEECTTSCEEEEE-TTTTEEE
T ss_pred             ------------------------------------------------C-c-cCCCceEEEEeCCCCEEEEE-CCCCEEE
Confidence                                                            0 0 33457889999999866666 7789999


Q ss_pred             EEECCcceeeeeec--cccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecC--CccEEEEEEccCCcEEE
Q psy14511        268 LWHEQEERLIQKLR--THMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITRE--GDVVCGLKWSPNGRYLA  341 (488)
Q Consensus       268 i~d~~~~~~~~~~~--~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--~~~i~~~~~s~~~~~l~  341 (488)
                      +||.. ++.+..+.  .+...+..+++  +++++++...++.|++||...  .....+..+  ...+..++++|+|++++
T Consensus       146 ~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g--~~~~~~~~~g~~~~p~~i~~d~~G~l~v  222 (286)
T 1q7f_A          146 IFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEG--QYLRQIGGEGITNYPIGVGINSNGEILI  222 (286)
T ss_dssp             EECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTC--CEEEEESCTTTSCSEEEEEECTTCCEEE
T ss_pred             EEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCC--CEEEEEccCCccCCCcEEEECCCCCEEE
Confidence            99965 45555543  34456788888  467777777889999999754  233333322  35678899999998877


Q ss_pred             EEe-cC-eEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeecc--ccEEEEEEcCCC
Q psy14511        342 SGS-NN-TVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQ--ERILSAVLSPDQ  417 (488)
Q Consensus       342 ~~~-d~-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~--~~v~~~~~s~~~  417 (488)
                      +.. ++ .|.+||..                                        ++.+..+..+.  ..+.+++++|+|
T Consensus       223 ~~~~~~~~i~~~~~~----------------------------------------g~~~~~~~~~~~~~~~~~i~~~~~g  262 (286)
T 1q7f_A          223 ADNHNNFNLTIFTQD----------------------------------------GQLISALESKVKHAQCFDVALMDDG  262 (286)
T ss_dssp             EECSSSCEEEEECTT----------------------------------------SCEEEEEEESSCCSCEEEEEEETTT
T ss_pred             EeCCCCEEEEEECCC----------------------------------------CCEEEEEcccCCCCcceeEEECCCC
Confidence            775 33 67777632                                        22233333332  247899999999


Q ss_pred             CEEEEEeCCCcEEEEecCCCCc
Q psy14511        418 TCVAAASADETISIWNCFPRDK  439 (488)
Q Consensus       418 ~~l~t~~~dg~v~iw~~~~~~~  439 (488)
                      +++++ +.|+.|++|++....+
T Consensus       263 ~l~vs-~~~~~v~v~~~~~~~p  283 (286)
T 1q7f_A          263 SVVLA-SKDYRLYIYRYVQLAP  283 (286)
T ss_dssp             EEEEE-ETTTEEEEEECSCCCC
T ss_pred             cEEEE-CCCCeEEEEEcccccc
Confidence            87777 6799999999876443

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.78  E-value=1.5e-16  Score=156.57  Aligned_cols=195  Identities=9%  Similarity=0.019  Sum_probs=131.0

Q ss_pred             CCceEEEEEcCCCCeEEEEeCCC----------CcEEEEECCc------ceeeeeec-cccccEEEEEe--cCCEEEEee
Q psy14511        241 NAYISCVAWKPRTTDLAVTNTCT----------EYIDLWHEQE------ERLIQKLR-THMHQVIAMCW--NGNLLSCGT  301 (488)
Q Consensus       241 ~~~i~~~~~~~~~~~l~~~~~~~----------~~i~i~d~~~------~~~~~~~~-~~~~~v~~~~~--~~~~l~~~~  301 (488)
                      ...+..++|+|||+.|+++ +.+          ..|++||+.+      ++. ..+. .+...+..++|  ||+.|+..+
T Consensus       129 ~~~~~~~~~spDg~~l~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~  206 (662)
T 3azo_A          129 GLRWADPVLLPERGEVWCM-AEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLA  206 (662)
T ss_dssp             CEEEEEEEEETTTTEEEEE-EEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEE
T ss_pred             CccccCcEECCCCCEEEEE-EecccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEE
Confidence            4467789999999999988 555          5899999987      544 3444 45566666677  899998877


Q ss_pred             cC--------CeEEEEECc-CCC--ccceeeecCCccEEEEEEccCCcEEEEEe-cC--eEEEEECCCCCCCcccce---
Q psy14511        302 IG--------GNILHYDVR-THS--DYPTAITREGDVVCGLKWSPNGRYLASGS-NN--TVKIWDFRQLDAKRPLGL---  364 (488)
Q Consensus       302 ~d--------g~i~i~d~~-~~~--~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~--~i~iwd~~~~~~~~~~~~---  364 (488)
                      .+        ..|++||+. ++.  ........+...+..++|+|||++++++. ++  .|.+||+.+++.......   
T Consensus       207 ~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~  286 (662)
T 3azo_A          207 WDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEE  286 (662)
T ss_dssp             ECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSB
T ss_pred             CCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeeccccccc
Confidence            55        379999998 441  33444455677899999999999666666 46  677777655543222111   


Q ss_pred             ----------eeeeecCCCCEEEEEccCCCCeEEEE--eCCCcceeEEEeeccccEEEE-EEcCCCCEEEEEeCCC--cE
Q psy14511        365 ----------IVPKLKREGRELVTSHGKQDCSLKMW--EYPRLHLIEELKIHQERILSA-VLSPDQTCVAAASADE--TI  429 (488)
Q Consensus       365 ----------~~~~~~~~~~~l~~~~g~~~~~i~i~--d~~~~~~~~~~~~~~~~v~~~-~~s~~~~~l~t~~~dg--~v  429 (488)
                                ....|+|+++.+++  +.. +.++||  |+.+++ +..+..|...+..+ +++++.-++++++.+.  .|
T Consensus       287 ~~~p~w~~~~~~~~~~~~~~~~~~--~~~-~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i  362 (662)
T 3azo_A          287 FAGPLWTPGMRWFAPLANGLIAVV--HGK-GAAVLGILDPESGE-LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEV  362 (662)
T ss_dssp             SSCCCCSTTCCSEEECTTSCEEEE--EBS-SSCEEEEEETTTTE-EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEE
T ss_pred             ccCccccccCceEeEeCCCEEEEE--EEc-CccEEEEEECCCCc-EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEE
Confidence                      11266788998888  455 777888  666555 67777787778777 5443333444555554  46


Q ss_pred             EEEecCCCCccc
Q psy14511        430 SIWNCFPRDKKR  441 (488)
Q Consensus       430 ~iw~~~~~~~~~  441 (488)
                      .+||+.+++...
T Consensus       363 ~~~d~~~g~~~~  374 (662)
T 3azo_A          363 VELDTVTGRART  374 (662)
T ss_dssp             EEEETTTCCEEE
T ss_pred             EEEECCCCceEE
Confidence            666766766543

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.77  E-value=1.5e-16  Score=143.40  Aligned_cols=282  Identities=12%  Similarity=0.130  Sum_probs=168.8

Q ss_pred             CCceEEEee---------cCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-C---C--eEEEEeccccC
Q psy14511          4 NGNLLSCGT---------IGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-N---N--TVKIWDFRQLD   68 (488)
Q Consensus         4 dg~~la~g~---------~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d---~--~i~vwd~~~~~   68 (488)
                      ||+++|...         .++.|.+||+.+++.  ..+    ..+..++|||||++||..+ +   +  .|.+||+.+++
T Consensus        23 dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~--~~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~   96 (347)
T 2gop_A           23 KGELVAYVLTKANLKDNKYENTIVIENLKNNAR--RFI----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLS   96 (347)
T ss_dssp             ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCE--EEE----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTE
T ss_pred             CCcEEEEEEeecCcccCCccceEEEEeCCCCce--EEc----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCc
Confidence            788887642         367899999988763  233    4688999999999999886 2   3  37777877644


Q ss_pred             cCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEE
Q psy14511         69 AKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLL  148 (488)
Q Consensus        69 ~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (488)
                      ...    +..+.. +..+.|+|||+.|+++..   +.       ........+       ....+..             
T Consensus        97 ~~~----l~~~~~-~~~~~wspdg~~l~~~~~---~~-------~~~~~~~~~-------~~~~~~~-------------  141 (347)
T 2gop_A           97 SKK----ILEAKN-IRSLEWNEDSRKLLIVGF---KR-------REDEDFIFE-------DDVPAWF-------------  141 (347)
T ss_dssp             EEE----EEEESE-EEEEEECTTSSEEEEEEE---CC-------CC----------------CCCC--------------
T ss_pred             eEE----EEcCCC-ccceeECCCCCEEEEEEc---cC-------CCcCCcEEE-------cccceee-------------
Confidence            221    222333 999999999998888764   31       000000000       0000000             


Q ss_pred             eeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCC
Q psy14511        149 HGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTN  228 (488)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~  228 (488)
                                                                                 ++.-+.......|++|++.++
T Consensus       142 -----------------------------------------------------------~g~~~~~~~~~~l~~~d~~~~  162 (347)
T 2gop_A          142 -----------------------------------------------------------DDLGFFDGEKTTFWIFDTESE  162 (347)
T ss_dssp             -------------------------------------------------------------------CEEEEEEEETTTT
T ss_pred             -----------------------------------------------------------cCcccccCccceEEEEECCCC
Confidence                                                                       000011112457889999888


Q ss_pred             ceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCC------C-cEEEEECCcceeeeeeccccccEEEEEecCCEEEEee
Q psy14511        229 KTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCT------E-YIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGT  301 (488)
Q Consensus       229 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~------~-~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~  301 (488)
                      +....+..    . .+..++|+|+| .++++ ..+      . ...+|.+.+++. ..+..+ ..+..++.+|+.|+.++
T Consensus       163 ~~~~~l~~----~-~~~~~~~spdg-~~~~~-~~~~~~~~~~~~~~l~~~d~~~~-~~l~~~-~~~~~~spdg~~l~~~~  233 (347)
T 2gop_A          163 EVIEEFEK----P-RFSSGIWHRDK-IVVNV-PHREIIPQYFKFWDIYIWEDGKE-EKMFEK-VSFYAVDSDGERILLYG  233 (347)
T ss_dssp             EEEEEEEE----E-TTCEEEEETTE-EEEEE-ECCCSSCCSSCCEEEEEEETTEE-EEEEEE-ESEEEEEECSSCEEEEE
T ss_pred             eEEeeecC----C-CcccccCCCCe-EEEEE-ecccccccccccccEEEeCCCce-EEeccC-cceeeECCCCCEEEEEE
Confidence            76333332    1 57789999999 66665 443      2 334444334443 334334 55666677898888776


Q ss_pred             cC--------CeEEEEECcCCCccceeeecCCccEEE-EEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeecC
Q psy14511        302 IG--------GNILHYDVRTHSDYPTAITREGDVVCG-LKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKR  371 (488)
Q Consensus       302 ~d--------g~i~i~d~~~~~~~~~~~~~~~~~i~~-~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~  371 (488)
                      .+        ..|++||  ++ ........+...+.. +.|+ ++ ++++++ ++.+++| +.+                
T Consensus       234 ~~~~~~~~~~~~l~~~d--~~-~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~----------------  291 (347)
T 2gop_A          234 KPEKKYMSEHNKLYIYD--GK-EVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWD----------------  291 (347)
T ss_dssp             CCSSSCCCSSCEEEEEC--SS-CEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EES----------------
T ss_pred             ccccCCccccceEEEEC--CC-ceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcC----------------
Confidence            44        4688888  32 333444455677876 8999 88 777666 4667776 541                


Q ss_pred             CCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcE-EEEecCCCCccccc
Q psy14511        372 EGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETI-SIWNCFPRDKKRKA  443 (488)
Q Consensus       372 ~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v-~iw~~~~~~~~~~~  443 (488)
                                             ++. ..+..+...|.+++|+|  .++++++.++.. .+|.+. ++...+.
T Consensus       292 -----------------------g~~-~~~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~-g~~~~lt  337 (347)
T 2gop_A          292 -----------------------GEI-KPIAKGRHWIMGFDVDE--IVVYLKETATRLRELFTWD-GEEKQLT  337 (347)
T ss_dssp             -----------------------SSE-EEEECSSSEEEEEEESS--SEEEEEECSSSCCEEEEES-SSEEECC
T ss_pred             -----------------------Cce-EEEecCCCeEEeeeeeC--cEEEEEcCCCChHHheEeC-CcEEEec
Confidence                                   222 22233466789999999  677777777665 778776 5433333

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.77  E-value=1.2e-16  Score=146.90  Aligned_cols=214  Identities=13%  Similarity=0.102  Sum_probs=137.1

Q ss_pred             CcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEE-------------------EEEcCCCCeEEEEe----CCCCc
Q psy14511        209 HDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISC-------------------VAWKPRTTDLAVTN----TCTEY  265 (488)
Q Consensus       209 ~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~-------------------~~~~~~~~~l~~~~----~~~~~  265 (488)
                      ..++.++.++.|++|++.+++...+...+.   .....                   +.++|+++.+++..    ..+..
T Consensus        93 ~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~---~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~  169 (396)
T 3c5m_A           93 RAFFYVKNELNLMKVDLETLEEQVIYTVDE---EWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCR  169 (396)
T ss_dssp             SEEEEEETTTEEEEEETTTCCEEEEEECCT---TEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEE
T ss_pred             CEEEEEEcCCcEEEEECCCCCcEEEEeccc---ccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcce
Confidence            446667778899999999988766665432   22222                   35678887776542    35678


Q ss_pred             EEEEECCcceeeeeeccccccEEEEEe---cCCEEEEeecC------CeEEEEECcCCCccceeeecC--CccEEEEEEc
Q psy14511        266 IDLWHEQEERLIQKLRTHMHQVIAMCW---NGNLLSCGTIG------GNILHYDVRTHSDYPTAITRE--GDVVCGLKWS  334 (488)
Q Consensus       266 i~i~d~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~--~~~i~~~~~s  334 (488)
                      |.+||+.+++..... .+...+..+.|   +++.|+..+.+      ..|.+||+....  ...+..+  ...+..++|+
T Consensus       170 l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~--~~~l~~~~~~~~~~~~~~s  246 (396)
T 3c5m_A          170 LIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSN--VRKIKEHAEGESCTHEFWI  246 (396)
T ss_dssp             EEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCC--CEESSCCCTTEEEEEEEEC
T ss_pred             EEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCc--eeEeeccCCCccccceEEC
Confidence            999999887654444 45666777777   45666665543      368888886542  2222222  3357889999


Q ss_pred             cCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEE
Q psy14511        335 PNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVL  413 (488)
Q Consensus       335 ~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~  413 (488)
                      |+|++|+..+ ++                                  +...+.|++||+.+++...... ... .. +.|
T Consensus       247 pdg~~l~~~~~~~----------------------------------~~~~~~l~~~d~~~g~~~~l~~-~~~-~~-~~~  289 (396)
T 3c5m_A          247 PDGSAMAYVSYFK----------------------------------GQTDRVIYKANPETLENEEVMV-MPP-CS-HLM  289 (396)
T ss_dssp             TTSSCEEEEEEET----------------------------------TTCCEEEEEECTTTCCEEEEEE-CCS-EE-EEE
T ss_pred             CCCCEEEEEecCC----------------------------------CCccceEEEEECCCCCeEEeee-CCC-CC-CCc
Confidence            9999887764 21                                  1112335566655554332211 111 23 899


Q ss_pred             cC-CCCEEEEEe----------------CCCcEEEEecCCCCccccccccC-----------CcceEEeecCCCceEEEE
Q psy14511        414 SP-DQTCVAAAS----------------ADETISIWNCFPRDKKRKARQVG-----------SGSSLEFAILKQPVSLTA  465 (488)
Q Consensus       414 s~-~~~~l~t~~----------------~dg~v~iw~~~~~~~~~~~~~~~-----------~v~~~~~s~~~~~~~~~~  465 (488)
                      +| ||+++++++                .++.|++||+.+++......+..           ....+.|+|+++.+.+..
T Consensus       290 s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s  369 (396)
T 3c5m_A          290 SNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTS  369 (396)
T ss_dssp             ECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEE
T ss_pred             cCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEe
Confidence            99 999888765                34789999999887665544443           256789999999876543

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.76  E-value=1.4e-15  Score=150.36  Aligned_cols=292  Identities=12%  Similarity=0.095  Sum_probs=180.6

Q ss_pred             CCceEEEeecCC-----eEEEEEcccCcccceee------cccCceEEEEEEccCCcEEEEec--CC----eEEEEeccc
Q psy14511          4 NGNLLSCGTIGG-----NILHYDVRTHSDYPTAI------TREGDVVCGLKWSPNGRYLASGS--NN----TVKIWDFRQ   66 (488)
Q Consensus         4 dg~~la~g~~dg-----~i~iwd~~~~~~~~~~~------~~h~~~V~~l~~sp~g~~las~~--d~----~i~vwd~~~   66 (488)
                      ||++++....++     .+.+.+...++ ....+      .+|...+..++|||||++||.+.  +|    .|++||+.+
T Consensus        82 dG~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t  160 (710)
T 2xdw_A           82 KGKRYFYFYNTGLQNQRVLYVQDSLEGE-ARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG  160 (710)
T ss_dssp             ETTEEEEEEECSSCSSCEEEEESSTTSC-CEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred             ECCEEEEEEEcCCceEEEEEEEcCCCCC-cEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence            788777554322     33444433333 11111      24555789999999999999875  22    899999998


Q ss_pred             cCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEE
Q psy14511         67 LDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSF  146 (488)
Q Consensus        67 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (488)
                      ++....  .+  ....+..++|+|||+.|+++..   ++.       .+..    .....                    
T Consensus       161 g~~~~~--~~--~~~~~~~~~wspDg~~l~~~~~---~~~-------~~~~----~~~~~--------------------  202 (710)
T 2xdw_A          161 AKELPD--VL--ERVKFSCMAWTHDGKGMFYNAY---PQQ-------DGKS----DGTET--------------------  202 (710)
T ss_dssp             TEEEEE--EE--EEECSCCEEECTTSSEEEEEEC---CCC-------SSCC----SSSCC--------------------
T ss_pred             CCCCcc--cc--cCcccceEEEEeCCCEEEEEEE---CCc-------cccc----ccccc--------------------
Confidence            654321  11  1223678999999999888775   432       0000    00000                    


Q ss_pred             EEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECC
Q psy14511        147 LLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTK  226 (488)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~  226 (488)
                                                                                    .    ......|++|++.
T Consensus       203 --------------------------------------------------------------~----~~~~~~v~~~~l~  216 (710)
T 2xdw_A          203 --------------------------------------------------------------S----TNLHQKLYYHVLG  216 (710)
T ss_dssp             --------------------------------------------------------------C----CCCCCEEEEEETT
T ss_pred             --------------------------------------------------------------c----cCCCCEEEEEECC
Confidence                                                                          0    0023467778877


Q ss_pred             CCceE--EEEecCCCCCCceEEEEEcCCCCeEEEEeCC----CCcEEEEECCc------ce-eeeeeccccccEE-EEEe
Q psy14511        227 TNKTQ--LLVEYPTYDNAYISCVAWKPRTTDLAVTNTC----TEYIDLWHEQE------ER-LIQKLRTHMHQVI-AMCW  292 (488)
Q Consensus       227 ~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~----~~~i~i~d~~~------~~-~~~~~~~~~~~v~-~~~~  292 (488)
                      +++..  .+..... +...+..+.|+|||++|+.....    +..|++||+.+      +. ....+..+...+. .+..
T Consensus       217 t~~~~~~~v~~~~~-~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~  295 (710)
T 2xdw_A          217 TDQSEDILCAEFPD-EPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYDYVTN  295 (710)
T ss_dssp             SCGGGCEEEECCTT-CTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEEEEEE
T ss_pred             CCcccceEEeccCC-CCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEEEEec
Confidence            76532  2333322 45567899999999999887321    56899999876      42 3455555444433 3444


Q ss_pred             cCCEEEEeecC----CeEEEEECcCCCc-cceeeecCCc--cEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccce
Q psy14511        293 NGNLLSCGTIG----GNILHYDVRTHSD-YPTAITREGD--VVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGL  364 (488)
Q Consensus       293 ~~~~l~~~~~d----g~i~i~d~~~~~~-~~~~~~~~~~--~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~  364 (488)
                      +|+.|+..+..    +.|.+||+.++.. ....+..+..  .+..++|++++.++++.. ++..+               
T Consensus       296 dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~---------------  360 (710)
T 2xdw_A          296 EGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNT---------------  360 (710)
T ss_dssp             ETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEE---------------
T ss_pred             cCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEE---------------
Confidence            78877766543    3699999987532 2344444443  677888887777777665 34322               


Q ss_pred             eeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEE-e---CCCcEEEEecCCCC
Q psy14511        365 IVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAA-S---ADETISIWNCFPRD  438 (488)
Q Consensus       365 ~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~-~---~dg~v~iw~~~~~~  438 (488)
                                            |++|++.+++.+..+..+.+.+..++++|+++.++.. +   ..+.|+.||+.+++
T Consensus       361 ----------------------l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~  416 (710)
T 2xdw_A          361 ----------------------LQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE  416 (710)
T ss_dssp             ----------------------EEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred             ----------------------EEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence                                  3334444455556666677788999999999866643 2   34789999999877

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.76  E-value=1.3e-15  Score=150.22  Aligned_cols=288  Identities=8%  Similarity=-0.050  Sum_probs=170.8

Q ss_pred             cCCceEEEeecCC---eEEEEEcc--cCcccceee------cccCceEEEEEEccCCcEEEEe-----c-CCeEEEEecc
Q psy14511          3 WNGNLLSCGTIGG---NILHYDVR--THSDYPTAI------TREGDVVCGLKWSPNGRYLASG-----S-NNTVKIWDFR   65 (488)
Q Consensus         3 ~dg~~la~g~~dg---~i~iwd~~--~~~~~~~~~------~~h~~~V~~l~~sp~g~~las~-----~-d~~i~vwd~~   65 (488)
                      +||++++....++   .-.||-..  .++ ....+      .+|...+..++|||||++||.+     + +..|++||+.
T Consensus        77 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~  155 (695)
T 2bkl_A           77 RRNGRFFYVRTHKDKEKAILYWRQGESGQ-EKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVD  155 (695)
T ss_dssp             EETTEEEEEEECTTCSSCEEEEEESTTSC-CEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETT
T ss_pred             EECCEEEEEEEcCCCeEEEEEEEcCCCCC-cEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECC
Confidence            3788888766543   34455443  333 22222      2566689999999999999954     3 4689999999


Q ss_pred             ccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEE
Q psy14511         66 QLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLS  145 (488)
Q Consensus        66 ~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (488)
                      +++.... ..+...  ....++|+|||+.|+.+..   |..      ..+..     ..                     
T Consensus       156 tg~~~~~-~~~~~~--~~~~~~wspDg~~l~~~~~---d~~------~~~~~-----~~---------------------  197 (695)
T 2bkl_A          156 SGEWSKV-DVIEGG--KYATPKWTPDSKGFYYEWL---PTD------PSIKV-----DE---------------------  197 (695)
T ss_dssp             TCCBCSS-CCBSCC--TTCCCEECTTSSEEEEEEC---CCC------TTSCG-----GG---------------------
T ss_pred             CCCCcCC-cccCcc--cccceEEecCCCEEEEEEe---cCC------CCCcc-----cc---------------------
Confidence            8664311 111111  1268899999998888775   432      00000     00                     


Q ss_pred             EEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEEC
Q psy14511        146 FLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNT  225 (488)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~  225 (488)
                                                                                          ......|++|++
T Consensus       198 --------------------------------------------------------------------~~~~~~v~~~~l  209 (695)
T 2bkl_A          198 --------------------------------------------------------------------RPGYTTIRYHTL  209 (695)
T ss_dssp             --------------------------------------------------------------------GGGGCEEEEEET
T ss_pred             --------------------------------------------------------------------CCCCCEEEEEEC
Confidence                                                                                001234666666


Q ss_pred             CCCce--EEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCC----cEEEEECCcceeeeeeccccccEEEEEe-cCCEEE
Q psy14511        226 KTNKT--QLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTE----YIDLWHEQEERLIQKLRTHMHQVIAMCW-NGNLLS  298 (488)
Q Consensus       226 ~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~----~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~~~~l~  298 (488)
                      .++..  ..+..... +...+..+.|+|+|++|+++ +.++    .|.+++..+++ ...+..+...+....+ +++ ++
T Consensus       210 ~t~~~~~~lv~~~~~-~~~~~~~~~~SpDG~~l~~~-~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~~~~~~~g~-l~  285 (695)
T 2bkl_A          210 GTEPSKDTVVHERTG-DPTTFLQSDLSRDGKYLFVY-ILRGWSENDVYWKRPGEKD-FRLLVKGVGAKYEVHAWKDR-FY  285 (695)
T ss_dssp             TSCGGGCEEEECCCC-CTTCEEEEEECTTSCCEEEE-EEETTTEEEEEEECTTCSS-CEEEEECSSCCEEEEEETTE-EE
T ss_pred             CCCchhceEEEecCC-CCEEEEEEEECCCCCEEEEE-EeCCCCceEEEEEcCCCCc-eEEeecCCCceEEEEecCCc-EE
Confidence            65542  23333332 45678899999999999888 4444    67777665543 3334344444444444 666 55


Q ss_pred             Eeec----CCeEEEEECcCCCc--cceeeecC-CccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeec
Q psy14511        299 CGTI----GGNILHYDVRTHSD--YPTAITRE-GDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLK  370 (488)
Q Consensus       299 ~~~~----dg~i~i~d~~~~~~--~~~~~~~~-~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~  370 (488)
                      ..+.    ++.|.+||+.++..  ....+..+ ...+..++|+ ++.++++.. ++..++|.+..               
T Consensus       286 ~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~---------------  349 (695)
T 2bkl_A          286 VLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATL---------------  349 (695)
T ss_dssp             EEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEET---------------
T ss_pred             EEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeC---------------
Confidence            4443    58899999977542  12333333 4557788887 666666666 46666664331               


Q ss_pred             CCCCEEEEEccCCCCeEEEEeCCCcceeEEEeec-cccEEEEEEcCCCCEEEEEe----CCCcEEEEecCCCCcc
Q psy14511        371 REGRELVTSHGKQDCSLKMWEYPRLHLIEELKIH-QERILSAVLSPDQTCVAAAS----ADETISIWNCFPRDKK  440 (488)
Q Consensus       371 ~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~t~~----~dg~v~iw~~~~~~~~  440 (488)
                                             +++....+..+ .+.+..++++|+++.++...    ..+.|++||+.+++..
T Consensus       350 -----------------------~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~  401 (695)
T 2bkl_A          350 -----------------------KGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSE  401 (695)
T ss_dssp             -----------------------TCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEE
T ss_pred             -----------------------CCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEE
Confidence                                   12223333333 45677788888887666332    3478999999887654

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.76  E-value=1.4e-16  Score=156.77  Aligned_cols=260  Identities=12%  Similarity=-0.003  Sum_probs=156.3

Q ss_pred             ecCCeEEEEEcccCcccceeecccCceEE---------EEEEc--cCCcE-EEEec--CCeEEEEecc--c-cCcCCCcc
Q psy14511         12 TIGGNILHYDVRTHSDYPTAITREGDVVC---------GLKWS--PNGRY-LASGS--NNTVKIWDFR--Q-LDAKRPQV   74 (488)
Q Consensus        12 ~~dg~i~iwd~~~~~~~~~~~~~h~~~V~---------~l~~s--p~g~~-las~~--d~~i~vwd~~--~-~~~~~~~~   74 (488)
                      +.++...||....+.. ...+..|...+.         ...|+  |||++ |+.++  +..|.+|++.  + ++ ...+.
T Consensus        44 ~~~~~~~l~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~  121 (662)
T 3azo_A           44 AEAGRATLVRRRADGA-EESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLT  121 (662)
T ss_dssp             TTTTEEEEEEECTTSC-EEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECS
T ss_pred             ccCCcEEEEEECCCCC-cceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEecc
Confidence            3478899999644442 345666666666         56666  99998 88776  4667777665  2 22 22221


Q ss_pred             ccc--ccccceeEEEEecCCCeEEeeeCCccc----------ceEEEEecCC------Ceeeeeee-cCCCccccccccc
Q psy14511         75 NNQ--CHLSAVKAIAWCPWEPTLLATGGGICD----------QTVRLWNSMN------GKEKCHVK-TDSQQANDETISY  135 (488)
Q Consensus        75 ~~~--~h~~~v~~l~~~~~~~~l~~~~~~~~d----------~~i~vwd~~~------~~~~~~~~-~~~~~~~~~~~~~  135 (488)
                      ...  .|...+..++|+|||+.|+++..   +          ..|++||+.+      ++.. .+. .+...        
T Consensus       122 ~~~~~~~~~~~~~~~~spDg~~l~~~~~---~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~l~~~~~~~--------  189 (662)
T 3azo_A          122 PVSAVGGGLRWADPVLLPERGEVWCMAE---EFTGEGPSDVRRFLAAVPLDGSAAADRSAVR-ELSDDAHRF--------  189 (662)
T ss_dssp             CCCCSTTCEEEEEEEEETTTTEEEEEEE---EECSSSTTCEEEEEEEEETTSTTTTCGGGSE-ESSCSCSSE--------
T ss_pred             CCccCCCCccccCcEECCCCCEEEEEEe---cccCCCCCCceeEEEEEECCCCccccCCcee-EEEecCCCc--------
Confidence            111  16678899999999999888775   4          6899999877      4322 221 11111        


Q ss_pred             cccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCC--CcEEE
Q psy14511        136 REQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGY--HDTLA  213 (488)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  213 (488)
                                                                                       ...+.|++  ..++.
T Consensus       190 -----------------------------------------------------------------~~~~~~SpDG~~la~  204 (662)
T 3azo_A          190 -----------------------------------------------------------------VTGPRLSPDGRQAVW  204 (662)
T ss_dssp             -----------------------------------------------------------------ECCCEECTTSSEEEE
T ss_pred             -----------------------------------------------------------------ccCceECCCCCEEEE
Confidence                                                                             11122332  23444


Q ss_pred             EECC--------CeEEEEECC-CC---ceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCC--cEEEEECCcceeeee
Q psy14511        214 VALD--------TSVYTWNTK-TN---KTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTE--YIDLWHEQEERLIQK  279 (488)
Q Consensus       214 ~~~d--------~~v~iw~~~-~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~--~i~i~d~~~~~~~~~  279 (488)
                      ++.+        ..|++||+. ++   +...+...   +...+..++|+|||+.++++ ..++  .|.+||..+++....
T Consensus       205 ~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~---~~~~~~~~~~spdg~l~~~~-~~~~~~~l~~~~~~~~~~~~l  280 (662)
T 3azo_A          205 LAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG---PEEAIAQAEWAPDGSLIVAT-DRTGWWNLHRVDPATGAATQL  280 (662)
T ss_dssp             EEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE---TTBCEEEEEECTTSCEEEEE-CTTSSCEEEEECTTTCCEEES
T ss_pred             EECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC---CCceEcceEECCCCeEEEEE-CCCCCeEEEEEECCCCceeec
Confidence            4433        479999999 56   33333321   46789999999999966666 7788  566667656655444


Q ss_pred             ecccccc--------EEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEE--EEe-c-
Q psy14511        280 LRTHMHQ--------VIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLA--SGS-N-  345 (488)
Q Consensus       280 ~~~~~~~--------v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~--~~~-d-  345 (488)
                      ...+...        +..+++  ++++++++.. +.+++|.+.........+..+...+..+. ++++..++  +++ + 
T Consensus       281 ~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~~~~l~~~~~~~~~~~-s~~~~~~~~~~~~~~~  358 (662)
T 3azo_A          281 CRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGELVDAAGPWTEWAATL-TVSGTRAVGVAASPRT  358 (662)
T ss_dssp             SCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTEEEECCSSCCEEEEEE-EEETTEEEEEEEETTE
T ss_pred             ccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCcEEEecCCCCeEEEEE-ecCCCEEEEEEcCCCC
Confidence            3332221        345666  6788888888 99999944322223566667777777661 44444333  333 2 


Q ss_pred             -CeEEEEECCCC
Q psy14511        346 -NTVKIWDFRQL  356 (488)
Q Consensus       346 -~~i~iwd~~~~  356 (488)
                       ..+.++|+.++
T Consensus       359 ~~~i~~~d~~~g  370 (662)
T 3azo_A          359 AYEVVELDTVTG  370 (662)
T ss_dssp             EEEEEEEETTTC
T ss_pred             CCEEEEEECCCC
Confidence             34555555443

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=99.74  E-value=1.9e-14  Score=127.46  Aligned_cols=296  Identities=11%  Similarity=0.043  Sum_probs=205.3

Q ss_pred             EEEecCCCeEEeeeCCc--ccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecccc
Q psy14511         86 IAWCPWEPTLLATGGGI--CDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSK  163 (488)
Q Consensus        86 l~~~~~~~~l~~~~~~~--~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (488)
                      ....|+++.++++...+  .++.|.+.|..+++.+..+.....+ . +.++++                           
T Consensus        38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spD---------------------------   88 (386)
T 3sjl_D           38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADD---------------------------   88 (386)
T ss_dssp             CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTT---------------------------
T ss_pred             eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCC---------------------------
Confidence            44578998888876521  1579999999999988887765443 1 333332                           


Q ss_pred             ccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEE----------CCCeEEEEECCCCceEEE
Q psy14511        164 RTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVA----------LDTSVYTWNTKTNKTQLL  233 (488)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~d~~v~iw~~~~~~~~~~  233 (488)
                                                                  ...++++.          .++.|.+||..+.+....
T Consensus        89 --------------------------------------------G~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~  124 (386)
T 3sjl_D           89 --------------------------------------------GSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTAD  124 (386)
T ss_dssp             --------------------------------------------SSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEE
T ss_pred             --------------------------------------------CCEEEEEcccccccccCCCCCEEEEEECCCCeEEEE
Confidence                                                        23444443          357899999999998887


Q ss_pred             EecCCCC----CCceEEEEEcCCCCeEEEEeCC-CCcEEEEECCcceeeeeeccccccEEEEEe-cCCEEEEeecCCeEE
Q psy14511        234 VEYPTYD----NAYISCVAWKPRTTDLAVTNTC-TEYIDLWHEQEERLIQKLRTHMHQVIAMCW-NGNLLSCGTIGGNIL  307 (488)
Q Consensus       234 ~~~~~~~----~~~i~~~~~~~~~~~l~~~~~~-~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~  307 (488)
                      +..+...    ......++++|||++++++... ++.|.++|+.+++.+.++....  ...+.. ..+.+++.+.||.+.
T Consensus       125 I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~~~~~P~g~~~~~~~~~DG~~~  202 (386)
T 3sjl_D          125 IELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--CYHIFPTAPDTFFMHCRDGSLA  202 (386)
T ss_dssp             EEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--EEEEEEEETTEEEEEETTSCEE
T ss_pred             EECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--cceeecCCCceeEEECCCCCEE
Confidence            7664200    1245679999999999998333 6899999999999988885422  122223 567777888899999


Q ss_pred             EEECcCCCccceeeecC----CccEE-EEEEc-cCCcEEEEEecCeEEEEECCCCC--CCcccc---------------e
Q psy14511        308 HYDVRTHSDYPTAITRE----GDVVC-GLKWS-PNGRYLASGSNNTVKIWDFRQLD--AKRPLG---------------L  364 (488)
Q Consensus       308 i~d~~~~~~~~~~~~~~----~~~i~-~~~~s-~~~~~l~~~~d~~i~iwd~~~~~--~~~~~~---------------~  364 (488)
                      +.++............+    ..++. ...|. ++|+++....++.+.+.|+....  ....+.               .
T Consensus       203 ~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~  282 (386)
T 3sjl_D          203 KVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGW  282 (386)
T ss_dssp             EEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSS
T ss_pred             EEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCc
Confidence            99987632222111111    12221 24564 68876665556999999997653  222221               0


Q ss_pred             eeeeecCCCCEEEEEccC--------CCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCC-EEEEE-eCCCcEEEEec
Q psy14511        365 IVPKLKREGRELVTSHGK--------QDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQT-CVAAA-SADETISIWNC  434 (488)
Q Consensus       365 ~~~~~~~~~~~l~~~~g~--------~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~t~-~~dg~v~iw~~  434 (488)
                      ....++++++.++++...        ..+.|.++|+++++.+.++.-- .++++++++||++ +|++. ..++.|.++|.
T Consensus       283 q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg-~~~~~lavs~D~~~~ly~tn~~~~~VsViD~  361 (386)
T 3sjl_D          283 QQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG-HEIDSINVSQDEKPLLYALSTGDKTLYIHDA  361 (386)
T ss_dssp             SCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECSSSSCEEEEEETTTTEEEEEET
T ss_pred             ceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC-CCcceEEECCCCCeEEEEEcCCCCeEEEEEC
Confidence            012778899998886431        1357999999999999887643 3688999999997 66664 45899999999


Q ss_pred             CCCCccccccccCCcceEEeecC
Q psy14511        435 FPRDKKRKARQVGSGSSLEFAIL  457 (488)
Q Consensus       435 ~~~~~~~~~~~~~~v~~~~~s~~  457 (488)
                      .+++........+....|.+++|
T Consensus       362 ~t~k~~~~i~~~~~p~~l~~s~d  384 (386)
T 3sjl_D          362 ESGEELRSVNQLGHGPQVITTAD  384 (386)
T ss_dssp             TTCCEEEEECCCCSSCCEEEECC
T ss_pred             CCCcEEEEecCCCCCceeEECCc
Confidence            99999888888888888999887

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.72  E-value=4.9e-15  Score=132.02  Aligned_cols=216  Identities=9%  Similarity=0.073  Sum_probs=151.1

Q ss_pred             CCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcce-eeeee---------ccccc
Q psy14511        216 LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEER-LIQKL---------RTHMH  285 (488)
Q Consensus       216 ~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~-~~~~~---------~~~~~  285 (488)
                      .++.|.+||..+++....... + +-..+..++++|+|+.+++. ..++.|+.||..... .+..+         ..+..
T Consensus        67 ~~~~i~~~d~~~g~~~~~~~~-~-~~~~p~gia~d~~g~l~v~d-~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~  143 (329)
T 3fvz_A           67 EEDTILVIDPNNAEILQSSGK-N-LFYLPHGLSIDTDGNYWVTD-VALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFC  143 (329)
T ss_dssp             CSCCEEEECTTTCCEEEEECT-T-TCSSEEEEEECTTSCEEEEE-TTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCS
T ss_pred             cCCcEEEEECCCCeEEeccCC-C-ccCCceEEEECCCCCEEEEE-CCCCEEEEEeCCCCeEEEEEecccCCCCCCccccC
Confidence            367899999988887654431 2 44578899999999966666 888999999986542 34444         23344


Q ss_pred             cEEEEEec---CCEEEEee-cCCeEEEEECcCCCccceeeec----------CCccEEEEEEccC-CcEEEEEe-cCeEE
Q psy14511        286 QVIAMCWN---GNLLSCGT-IGGNILHYDVRTHSDYPTAITR----------EGDVVCGLKWSPN-GRYLASGS-NNTVK  349 (488)
Q Consensus       286 ~v~~~~~~---~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~----------~~~~i~~~~~s~~-~~~l~~~~-d~~i~  349 (488)
                      ....++++   ++++++.+ .++.|++||.. + .....+..          +-.....++++|+ ++++++.. ++.|+
T Consensus       144 ~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~-g-~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~  221 (329)
T 3fvz_A          144 QPTDVAVEPSTGAVFVSDGYCNSRIVQFSPS-G-KFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQ  221 (329)
T ss_dssp             SEEEEEECTTTCCEEEEECSSCCEEEEECTT-S-CEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred             CCcEEEEeCCCCeEEEEeCCCCCeEEEEcCC-C-CEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEE
Confidence            67788883   56666665 68999999954 2 23333322          1233789999999 66555555 49999


Q ss_pred             EEECCCCCCCcccce-------eeeeecCCCCEEEEE-----ccCCCCeEEEEeCCCcceeEEEe---eccccEEEEEEc
Q psy14511        350 IWDFRQLDAKRPLGL-------IVPKLKREGRELVTS-----HGKQDCSLKMWEYPRLHLIEELK---IHQERILSAVLS  414 (488)
Q Consensus       350 iwd~~~~~~~~~~~~-------~~~~~~~~~~~l~~~-----~g~~~~~i~i~d~~~~~~~~~~~---~~~~~v~~~~~s  414 (488)
                      +||..+++....+..       ...+++| +..+...     +...+..+++||..+++.+..+.   ++...+..++++
T Consensus       222 ~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~  300 (329)
T 3fvz_A          222 CFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVAS  300 (329)
T ss_dssp             EEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEEC
T ss_pred             EEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEEC
Confidence            999986654333211       1225677 3322221     13445689999999999988873   566779999999


Q ss_pred             CCCCEEEEEeCCCcEEEEecCCC
Q psy14511        415 PDQTCVAAASADETISIWNCFPR  437 (488)
Q Consensus       415 ~~~~~l~t~~~dg~v~iw~~~~~  437 (488)
                      |+|.++++...++.|++|++...
T Consensus       301 ~dG~lyvad~~~~~I~~~~~~~~  323 (329)
T 3fvz_A          301 EDGTVYIGDAHTNTVWKFTLTEK  323 (329)
T ss_dssp             TTSEEEEEESSSCCEEEEEEEEC
T ss_pred             CCCCEEEEECCCCEEEEEeCCcc
Confidence            99988888889999999998753

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.72  E-value=1.6e-15  Score=136.56  Aligned_cols=169  Identities=7%  Similarity=0.107  Sum_probs=106.3

Q ss_pred             eEEEEEcCCCCeEEEEeCC--------------------------CCcEEEEECCcceeeeeeccccccEEEEEe--cCC
Q psy14511        244 ISCVAWKPRTTDLAVTNTC--------------------------TEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGN  295 (488)
Q Consensus       244 i~~~~~~~~~~~l~~~~~~--------------------------~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~  295 (488)
                      +..++|+|+|+.|++++..                          ...|.+||+.+++.+..+.. . .+..+.|  ++ 
T Consensus       106 ~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-  182 (347)
T 2gop_A          106 IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-  182 (347)
T ss_dssp             EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-
T ss_pred             ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-
Confidence            6667777777766666211                          35789999988776444544 3 5666677  56 


Q ss_pred             EEEEeecCC-------eEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEec-CeEEEEECCCCCCCcccceeee
Q psy14511        296 LLSCGTIGG-------NILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN-NTVKIWDFRQLDAKRPLGLIVP  367 (488)
Q Consensus       296 ~l~~~~~dg-------~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d-~~i~iwd~~~~~~~~~~~~~~~  367 (488)
                      +++++..++       ...+|.+.+ .. ...+..+ ..+..+  +|+|++|+..+. +.       ..           
T Consensus       183 ~~~~~~~~~~~~~~~~~~~l~~~d~-~~-~~~l~~~-~~~~~~--spdg~~l~~~~~~~~-------~~-----------  239 (347)
T 2gop_A          183 IVVNVPHREIIPQYFKFWDIYIWED-GK-EEKMFEK-VSFYAV--DSDGERILLYGKPEK-------KY-----------  239 (347)
T ss_dssp             EEEEEECCCSSCCSSCCEEEEEEET-TE-EEEEEEE-ESEEEE--EECSSCEEEEECCSS-------SC-----------
T ss_pred             EEEEEecccccccccccccEEEeCC-Cc-eEEeccC-cceeeE--CCCCCEEEEEEcccc-------CC-----------
Confidence            666665442       334444433 22 2333333 444443  888888877652 10       00           


Q ss_pred             eecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEE-EEEcCCCCEEEEEeCCCcEEEEecCCCCcccccccc
Q psy14511        368 KLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILS-AVLSPDQTCVAAASADETISIWNCFPRDKKRKARQV  446 (488)
Q Consensus       368 ~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~-~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~~~~~  446 (488)
                                   ......|++||  +++.......|...+.. +.|+ |+ ++++++.++.+++| +.+++......+.
T Consensus       240 -------------~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~~~~~~  301 (347)
T 2gop_A          240 -------------MSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKPIAKGR  301 (347)
T ss_dssp             -------------CCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEEEECSS
T ss_pred             -------------ccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEEEecCC
Confidence                         12245677777  55544444456677886 9999 88 99999999999999 8866555555556


Q ss_pred             CCcceEEeec
Q psy14511        447 GSGSSLEFAI  456 (488)
Q Consensus       447 ~~v~~~~~s~  456 (488)
                      +.+.++.|+|
T Consensus       302 ~~v~~~~~s~  311 (347)
T 2gop_A          302 HWIMGFDVDE  311 (347)
T ss_dssp             SEEEEEEESS
T ss_pred             CeEEeeeeeC
Confidence            7788899998

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.70  E-value=2.7e-14  Score=127.01  Aligned_cols=259  Identities=10%  Similarity=0.009  Sum_probs=169.3

Q ss_pred             cCCeEEEEEcccCcccceeec-----ccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEE
Q psy14511         13 IGGNILHYDVRTHSDYPTAIT-----REGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAI   86 (488)
Q Consensus        13 ~dg~i~iwd~~~~~~~~~~~~-----~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l   86 (488)
                      .++.|.++|.++++.....+.     ........+++. ++++.++.. ++.|.+||..+++....+   . .......+
T Consensus        15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i---~-~~~~p~~i   89 (328)
T 3dsm_A           15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRI---T-GFTSPRYI   89 (328)
T ss_dssp             CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEE---E-CCSSEEEE
T ss_pred             CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEc---C-CCCCCcEE
Confidence            488999999998874433221     122346778775 344444444 899999999886543333   2 33568899


Q ss_pred             EEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccc
Q psy14511         87 AWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTV  166 (488)
Q Consensus        87 ~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (488)
                      ++++++ .++++...  ++.|.+||+.+++....+.........                                    
T Consensus        90 ~~~~~g-~lyv~~~~--~~~v~~iD~~t~~~~~~i~~g~~~~~~------------------------------------  130 (328)
T 3dsm_A           90 HFLSDE-KAYVTQIW--DYRIFIINPKTYEITGYIECPDMDMES------------------------------------  130 (328)
T ss_dssp             EEEETT-EEEEEEBS--CSEEEEEETTTTEEEEEEECTTCCTTT------------------------------------
T ss_pred             EEeCCC-eEEEEECC--CCeEEEEECCCCeEEEEEEcCCccccC------------------------------------
Confidence            999998 56666632  899999999998876655443200000                                    


Q ss_pred             cceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEE--CCCeEEEEECCCCceEEEEecCCCCCCce
Q psy14511        167 SPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVA--LDTSVYTWNTKTNKTQLLVEYPTYDNAYI  244 (488)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~v~iw~~~~~~~~~~~~~~~~~~~~i  244 (488)
                                                      .....+.+.++.++++.  .++.|.++|..+++....+...    ...
T Consensus       131 --------------------------------~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g----~~p  174 (328)
T 3dsm_A          131 --------------------------------GSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELTIG----IQP  174 (328)
T ss_dssp             --------------------------------CBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEEECS----SCB
T ss_pred             --------------------------------CCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC----CCc
Confidence                                            00001222345667666  4889999999999887766642    245


Q ss_pred             EEEEEcCCCCeEEEEeCCC----------CcEEEEECCcceeeeeeccc-cccEEEEEe--cCCEEEEeecCCeEEEEEC
Q psy14511        245 SCVAWKPRTTDLAVTNTCT----------EYIDLWHEQEERLIQKLRTH-MHQVIAMCW--NGNLLSCGTIGGNILHYDV  311 (488)
Q Consensus       245 ~~~~~~~~~~~l~~~~~~~----------~~i~i~d~~~~~~~~~~~~~-~~~v~~~~~--~~~~l~~~~~dg~i~i~d~  311 (488)
                      ..++++|+|+.++++ ..+          +.|.++|..+++....+... ......+++  +++.++++..  .|.+||.
T Consensus       175 ~~i~~~~dG~l~v~~-~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~  251 (328)
T 3dsm_A          175 TSLVMDKYNKMWTIT-DGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPV  251 (328)
T ss_dssp             CCCEECTTSEEEEEB-CCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEET
T ss_pred             cceEEcCCCCEEEEE-CCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEEC
Confidence            678999999866655 443          78999999988877666432 235677888  4788877655  8999999


Q ss_pred             cCCCcccee-eecCCccEEEEEEcc-CCcEEEEE----e-cCeEEEEECC
Q psy14511        312 RTHSDYPTA-ITREGDVVCGLKWSP-NGRYLASG----S-NNTVKIWDFR  354 (488)
Q Consensus       312 ~~~~~~~~~-~~~~~~~i~~~~~s~-~~~~l~~~----~-d~~i~iwd~~  354 (488)
                      .+++..... +.........++++| +++++++.    . ++.|.+||..
T Consensus       252 ~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~  301 (328)
T 3dsm_A          252 EADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ  301 (328)
T ss_dssp             TCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred             CCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence            876432111 222245688999999 45555554    3 3667777655

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.70  E-value=9.9e-15  Score=130.04  Aligned_cols=241  Identities=12%  Similarity=0.074  Sum_probs=162.3

Q ss_pred             ccCCceEEEeecC------------------------CeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-C
Q psy14511          2 CWNGNLLSCGTIG------------------------GNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-N   56 (488)
Q Consensus         2 ~~dg~~la~g~~d------------------------g~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d   56 (488)
                      +.+|+++++...+                        +.|.+||..+++.+...-.++......++++|+|+++++.. +
T Consensus        32 d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~  111 (329)
T 3fvz_A           32 DSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVAL  111 (329)
T ss_dssp             CTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETTT
T ss_pred             CCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECCC
Confidence            3478888887766                        47999999888754333335556789999999999888877 8


Q ss_pred             CeEEEEeccccCcCCCcccc---------cccccceeEEEEec-CCCeEEeeeC-CcccceEEEEecCCCeeeeeeecCC
Q psy14511         57 NTVKIWDFRQLDAKRPQVNN---------QCHLSAVKAIAWCP-WEPTLLATGG-GICDQTVRLWNSMNGKEKCHVKTDS  125 (488)
Q Consensus        57 ~~i~vwd~~~~~~~~~~~~~---------~~h~~~v~~l~~~~-~~~~l~~~~~-~~~d~~i~vwd~~~~~~~~~~~~~~  125 (488)
                      +.|++||.....  ..+..+         .++......++++| ++. ++++.+ .  ++.|++|+ .+++.+..+....
T Consensus       112 ~~v~~~~~~g~~--~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~-lyv~d~~~--~~~I~~~~-~~g~~~~~~~~~g  185 (329)
T 3fvz_A          112 HQVFKLDPHSKE--GPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGA-VFVSDGYC--NSRIVQFS-PSGKFVTQWGEES  185 (329)
T ss_dssp             TEEEEECTTCSS--CCSEEESBTTBCCCSTTCCSSEEEEEECTTTCC-EEEEECSS--CCEEEEEC-TTSCEEEEECEEC
T ss_pred             CEEEEEeCCCCe--EEEEEecccCCCCCCccccCCCcEEEEeCCCCe-EEEEeCCC--CCeEEEEc-CCCCEEEEeccCC
Confidence            999999986421  112212         23445789999999 665 555542 2  88999999 5666554443221


Q ss_pred             CccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeee
Q psy14511        126 QQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLD  205 (488)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (488)
                      .....                                                               ..........+.
T Consensus       186 ~~~~~---------------------------------------------------------------~~~~~~~p~gia  202 (329)
T 3fvz_A          186 SGSSP---------------------------------------------------------------RPGQFSVPHSLA  202 (329)
T ss_dssp             CSSSC---------------------------------------------------------------CTTEESCEEEEE
T ss_pred             CCCCC---------------------------------------------------------------CCcccCCCcEEE
Confidence            00000                                                               000000112233


Q ss_pred             eCC--CcEEEEE-CCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEE------eCCCCcEEEEECCccee
Q psy14511        206 WGY--HDTLAVA-LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVT------NTCTEYIDLWHEQEERL  276 (488)
Q Consensus       206 ~~~--~~~~~~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~------~~~~~~i~i~d~~~~~~  276 (488)
                      +++  +.++++. .++.|++|+..+++....+.... +...+..++++| +..+...      ...+..|++|+..+++.
T Consensus       203 ~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~-~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~  280 (329)
T 3fvz_A          203 LVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHAS-FGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEI  280 (329)
T ss_dssp             EETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTT-TTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCE
T ss_pred             EECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccc-cCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeE
Confidence            332  4565555 78899999999888887776555 667788999999 3222222      13455899999999988


Q ss_pred             eeeec---cccccEEEEEe--cCCEEEEeecCCeEEEEECcC
Q psy14511        277 IQKLR---THMHQVIAMCW--NGNLLSCGTIGGNILHYDVRT  313 (488)
Q Consensus       277 ~~~~~---~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~  313 (488)
                      +..+.   .+......+++  +|+++++...++.|++|++..
T Consensus       281 ~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~  322 (329)
T 3fvz_A          281 IDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE  322 (329)
T ss_dssp             EEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred             EEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence            88873   56667888888  577888888899999999865

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.69  E-value=2.1e-14  Score=128.49  Aligned_cols=221  Identities=10%  Similarity=0.040  Sum_probs=150.2

Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecC----CeEEEEECcC
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIG----GNILHYDVRT  313 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d----g~i~i~d~~~  313 (488)
                      +...+.+++|+|+++.++++ ..++.|.+||..+++.......+...+.++++  +++++++...+    +.|.+||...
T Consensus        43 ~~~~~~~~~~~~~g~l~~~~-~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~  121 (333)
T 2dg1_A           43 KGLQLEGLNFDRQGQLFLLD-VFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENG  121 (333)
T ss_dssp             SCCCEEEEEECTTSCEEEEE-TTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTS
T ss_pred             cCccccCcEECCCCCEEEEE-CCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCC
Confidence            44457899999999866666 88899999999887665544345677899998  56777766665    6899999887


Q ss_pred             CCccceeee--cCCccEEEEEEccCCcEEEEEec-------CeEEEEECCCCCCCcccce----eeeeecCCCCEEEEEc
Q psy14511        314 HSDYPTAIT--REGDVVCGLKWSPNGRYLASGSN-------NTVKIWDFRQLDAKRPLGL----IVPKLKREGRELVTSH  380 (488)
Q Consensus       314 ~~~~~~~~~--~~~~~i~~~~~s~~~~~l~~~~d-------~~i~iwd~~~~~~~~~~~~----~~~~~~~~~~~l~~~~  380 (488)
                      .. ....+.  .+...+..++++|+|+++++...       +.|..+|..+.+.......    ...+|+|+++.++++ 
T Consensus       122 ~~-~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~-  199 (333)
T 2dg1_A          122 DN-LQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVT-  199 (333)
T ss_dssp             CS-CEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEE-
T ss_pred             CE-EEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEE-
Confidence            53 221222  23456899999999998887652       4566666554332211111    112789999977664 


Q ss_pred             cCCCCeEEEEeCCC-cceeEEE--------eeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcccccc-cc----
Q psy14511        381 GKQDCSLKMWEYPR-LHLIEEL--------KIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKAR-QV----  446 (488)
Q Consensus       381 g~~~~~i~i~d~~~-~~~~~~~--------~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~~~-~~----  446 (488)
                      ...++.|++||+.+ ++.+..+        .++ ..+..++++++|+++++...++.|.+||.. ++...... ..    
T Consensus       200 ~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~g  277 (333)
T 2dg1_A          200 ETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNKR-GYPIGQILIPGRDEG  277 (333)
T ss_dssp             EGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECTT-SCEEEEEECTTGGGT
T ss_pred             eCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECCC-CCEEEEEEcCCCccc
Confidence            45578999999863 4333221        112 367889999999988888888999999984 44332222 11    


Q ss_pred             --CCcceEEeecCCCceEEEE
Q psy14511        447 --GSGSSLEFAILKQPVSLTA  465 (488)
Q Consensus       447 --~~v~~~~~s~~~~~~~~~~  465 (488)
                        ..+.+++|+|+++.+.+..
T Consensus       278 ~~~~~~~~~~~~dg~~L~v~~  298 (333)
T 2dg1_A          278 HMLRSTHPQFIPGTNQLIICS  298 (333)
T ss_dssp             CSCBCCEEEECTTSCEEEEEE
T ss_pred             cccCcceEEECCCCCEEEEEe
Confidence              1578999999987664443

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.69  E-value=4e-14  Score=140.52  Aligned_cols=290  Identities=11%  Similarity=0.036  Sum_probs=170.9

Q ss_pred             CCceEEEeecCCe---EEEEEccc----Cccccee------ecccCceEEEEEEccCCcEEEEec-C-----CeEEEEec
Q psy14511          4 NGNLLSCGTIGGN---ILHYDVRT----HSDYPTA------ITREGDVVCGLKWSPNGRYLASGS-N-----NTVKIWDF   64 (488)
Q Consensus         4 dg~~la~g~~dg~---i~iwd~~~----~~~~~~~------~~~h~~~V~~l~~sp~g~~las~~-d-----~~i~vwd~   64 (488)
                      ||++++....++.   -.||-...    +......      -.+|...+..++|||||++||.+. +     ..|++||+
T Consensus       117 dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl  196 (741)
T 1yr2_A          117 RGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGV  196 (741)
T ss_dssp             ETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEET
T ss_pred             ECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEEC
Confidence            7888886654432   55665542    2222222      133445789999999999999876 2     46999999


Q ss_pred             cccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeE
Q psy14511         65 RQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHL  144 (488)
Q Consensus        65 ~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (488)
                      .+++...    ...+...+..++|+|| +.|+.+..   ++...     .+..    .                      
T Consensus       197 ~tg~~~~----~~~~~~~~~~~~wspD-~~l~~~~~---~~~~~-----~~~~----~----------------------  237 (741)
T 1yr2_A          197 ADGKPLA----DELKWVKFSGLAWLGN-DALLYSRF---AEPKE-----GQAF----Q----------------------  237 (741)
T ss_dssp             TTCCEEE----EEEEEEESCCCEESTT-SEEEEEEC---CCC--------------------------------------
T ss_pred             CCCCCCC----ccCCCceeccEEEECC-CEEEEEEe---cCccc-----cccc----c----------------------
Confidence            9865422    1112223468899999 88888775   43210     0000    0                      


Q ss_pred             EEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEE
Q psy14511        145 SFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWN  224 (488)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~  224 (488)
                                                                                          .......|++|+
T Consensus       238 --------------------------------------------------------------------~~~~~~~v~~~~  249 (741)
T 1yr2_A          238 --------------------------------------------------------------------ALNYNQTVWLHR  249 (741)
T ss_dssp             ---------------------------------------------------------------------CCCCCEEEEEE
T ss_pred             --------------------------------------------------------------------cCCCCCEEEEEE
Confidence                                                                                000134566677


Q ss_pred             CCCCce--EEEEecCCCCCCceEEEEEcCCCCeEEEEeCC----CCcEEEEECCcc--eeeeeecccccc-EEEEEecCC
Q psy14511        225 TKTNKT--QLLVEYPTYDNAYISCVAWKPRTTDLAVTNTC----TEYIDLWHEQEE--RLIQKLRTHMHQ-VIAMCWNGN  295 (488)
Q Consensus       225 ~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~----~~~i~i~d~~~~--~~~~~~~~~~~~-v~~~~~~~~  295 (488)
                      +.++..  ..+..... +...+..+.|+|||++|+..+..    ...|++||+.++  +....+..+... ...+..+++
T Consensus       250 lgt~~~~~~lv~~~~~-~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~dg~  328 (741)
T 1yr2_A          250 LGTPQSADQPVFATPE-LPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFVDGVGD  328 (741)
T ss_dssp             TTSCGGGCEEEECCTT-CTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEEEEETT
T ss_pred             CCCCchhCEEEeccCC-CCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEEeccCC
Confidence            665542  22333222 33458899999999999887322    348999998776  314444444333 333444888


Q ss_pred             EEEEeec----CCeEEEEECcCC-CccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeee
Q psy14511        296 LLSCGTI----GGNILHYDVRTH-SDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKL  369 (488)
Q Consensus       296 ~l~~~~~----dg~i~i~d~~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~  369 (488)
                      .|+..+.    ++.|.+||+.++ ......+..+...+..++++ ++.++++.. ++..+||.+.               
T Consensus       329 ~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~---------------  392 (741)
T 1yr2_A          329 QLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFD---------------  392 (741)
T ss_dssp             EEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEE---------------
T ss_pred             EEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe---------------
Confidence            8887765    355999998764 23344445555556677776 455555555 4555555432               


Q ss_pred             cCCCCEEEEEccCCCCeEEEEeCCCcceeEEEee-ccccEEEEEEcCCCCEEEEEe----CCCcEEEEecCCCCcc
Q psy14511        370 KREGRELVTSHGKQDCSLKMWEYPRLHLIEELKI-HQERILSAVLSPDQTCVAAAS----ADETISIWNCFPRDKK  440 (488)
Q Consensus       370 ~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~t~~----~dg~v~iw~~~~~~~~  440 (488)
                                            + +++....+.. +.+.+..+.++||++.|+...    ..+.|++||+.+++..
T Consensus       393 ----------------------~-~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~  445 (741)
T 1yr2_A          393 ----------------------L-DGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTT  445 (741)
T ss_dssp             ----------------------T-TSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEE
T ss_pred             ----------------------C-CCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEE
Confidence                                  1 1223334443 356688899999988666332    3478999999887643

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.69  E-value=1.5e-14  Score=129.37  Aligned_cols=259  Identities=11%  Similarity=0.007  Sum_probs=171.1

Q ss_pred             eEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCe
Q psy14511         38 VVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGK  116 (488)
Q Consensus        38 ~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~  116 (488)
                      .|.+++|+|++..++..+ ++.++.|.-.      ....+..+...+.+++|+|+++ +++++..  ++.|.+||..+++
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~g~-l~~~~~~--~~~i~~~d~~~~~   77 (333)
T 2dg1_A            7 DLPTLFYSGKSNSAVPIISESELQTITAE------PWLEISKKGLQLEGLNFDRQGQ-LFLLDVF--EGNIFKINPETKE   77 (333)
T ss_dssp             CCCBCCSCGGGGCSSCCCCGGGSCEEECE------EEEEEESSCCCEEEEEECTTSC-EEEEETT--TCEEEEECTTTCC
T ss_pred             ccceeeecCCccceeEEeecccCcccccc------eeEEEeccCccccCcEECCCCC-EEEEECC--CCEEEEEeCCCCc
Confidence            477889999988887765 8888888321      2223444566778999999987 5554442  7889999886654


Q ss_pred             eeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCcc
Q psy14511        117 EKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSII  196 (488)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (488)
                      ....                                                                            
T Consensus        78 ~~~~----------------------------------------------------------------------------   81 (333)
T 2dg1_A           78 IKRP----------------------------------------------------------------------------   81 (333)
T ss_dssp             EEEE----------------------------------------------------------------------------
T ss_pred             EEEE----------------------------------------------------------------------------
Confidence            2110                                                                            


Q ss_pred             ccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCC----CcEEEEECC
Q psy14511        197 NDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCT----EYIDLWHEQ  272 (488)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~----~~i~i~d~~  272 (488)
                                                           ...   +...+.+++++|+++.+++. ..+    +.|.+||..
T Consensus        82 -------------------------------------~~~---~~~~~~~i~~~~dg~l~v~~-~~~~~~~~~i~~~d~~  120 (333)
T 2dg1_A           82 -------------------------------------FVS---HKANPAAIKIHKDGRLFVCY-LGDFKSTGGIFAATEN  120 (333)
T ss_dssp             -------------------------------------EEC---SSSSEEEEEECTTSCEEEEE-CTTSSSCCEEEEECTT
T ss_pred             -------------------------------------eeC---CCCCcceEEECCCCcEEEEe-CCCCCCCceEEEEeCC
Confidence                                                 000   34568899999999877766 555    689999988


Q ss_pred             cceeeeeec--cccccEEEEEe--cCCEEEEeec------CCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEE
Q psy14511        273 EERLIQKLR--THMHQVIAMCW--NGNLLSCGTI------GGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLAS  342 (488)
Q Consensus       273 ~~~~~~~~~--~~~~~v~~~~~--~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~  342 (488)
                      ++.....+.  .+...+..+.+  +++++++...      .+.|..+|...+.  ...+......+..++|+|+++.|+.
T Consensus       121 ~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~i~~~~dg~~l~v  198 (333)
T 2dg1_A          121 GDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRT--VTPIIQNISVANGIALSTDEKVLWV  198 (333)
T ss_dssp             SCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCC--EEEEEEEESSEEEEEECTTSSEEEE
T ss_pred             CCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCE--EEEeecCCCcccceEECCCCCEEEE
Confidence            765443332  23456788888  5666665543      3556666665432  2222233344788999999987665


Q ss_pred             Ee--cCeEEEEECCC-CCCCccc--------ce--ee--eeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccc-
Q psy14511        343 GS--NNTVKIWDFRQ-LDAKRPL--------GL--IV--PKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQE-  406 (488)
Q Consensus       343 ~~--d~~i~iwd~~~-~~~~~~~--------~~--~~--~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~-  406 (488)
                      +.  ++.|.+||+.+ +.....+        ..  ..  .+++++|+.+++  ...++.|.+||. +++.+..+..+.. 
T Consensus       199 ~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~--~~~~~~v~~~d~-~g~~~~~~~~~~~~  275 (333)
T 2dg1_A          199 TETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVA--MYGQGRVLVFNK-RGYPIGQILIPGRD  275 (333)
T ss_dssp             EEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEE--EETTTEEEEECT-TSCEEEEEECTTGG
T ss_pred             EeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEE--EcCCCEEEEECC-CCCEEEEEEcCCCc
Confidence            54  48999999964 2211110        00  11  278889987776  355789999998 5677777665433 


Q ss_pred             -----cEEEEEEcCCCCEEEEEeCCC
Q psy14511        407 -----RILSAVLSPDQTCVAAASADE  427 (488)
Q Consensus       407 -----~v~~~~~s~~~~~l~t~~~dg  427 (488)
                           .+.+++|+||++.|+.++.++
T Consensus       276 ~g~~~~~~~~~~~~dg~~L~v~~~~g  301 (333)
T 2dg1_A          276 EGHMLRSTHPQFIPGTNQLIICSNDI  301 (333)
T ss_dssp             GTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred             cccccCcceEEECCCCCEEEEEeCcc
Confidence                 689999999987776665553

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.69  E-value=4.1e-14  Score=123.59  Aligned_cols=227  Identities=9%  Similarity=0.099  Sum_probs=154.2

Q ss_pred             cCCceEEEeecCCeEEEEEcccCcccceeec------ccCceEEEEEE-ccCCcEEEEec--CCeEEEEeccccCcCCCc
Q psy14511          3 WNGNLLSCGTIGGNILHYDVRTHSDYPTAIT------REGDVVCGLKW-SPNGRYLASGS--NNTVKIWDFRQLDAKRPQ   73 (488)
Q Consensus         3 ~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~------~h~~~V~~l~~-sp~g~~las~~--d~~i~vwd~~~~~~~~~~   73 (488)
                      .+|+++++...++.|.+||.. ++.+ ..+.      +|...+..+++ .++++++++..  ++.|.+||.. ++....+
T Consensus        39 ~~g~l~v~~~~~~~i~~~d~~-g~~~-~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~-g~~~~~~  115 (286)
T 1q7f_A           39 AQNDIIVADTNNHRIQIFDKE-GRFK-FQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQY-GQFVRKF  115 (286)
T ss_dssp             TTCCEEEEEGGGTEEEEECTT-SCEE-EEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTT-SCEEEEE
T ss_pred             CCCCEEEEECCCCEEEEECCC-CcEE-EEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEECCC-CcEEEEe
Confidence            378888888889999999987 3323 2221      34467899999 57888888774  8999999943 3322211


Q ss_pred             ccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeec
Q psy14511         74 VNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEI  153 (488)
Q Consensus        74 ~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (488)
                        ...+...+..++++|+++ ++++...  ++.|.+||.. ++....+                                
T Consensus       116 --~~~~~~~~~~i~~~~~g~-l~v~~~~--~~~i~~~~~~-g~~~~~~--------------------------------  157 (286)
T 1q7f_A          116 --GATILQHPRGVTVDNKGR-IIVVECK--VMRVIIFDQN-GNVLHKF--------------------------------  157 (286)
T ss_dssp             --CTTTCSCEEEEEECTTSC-EEEEETT--TTEEEEECTT-SCEEEEE--------------------------------
T ss_pred             --cCccCCCceEEEEeCCCC-EEEEECC--CCEEEEEcCC-CCEEEEe--------------------------------
Confidence              112445789999999997 4444432  7889999853 3321111                                


Q ss_pred             cccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEE
Q psy14511        154 DRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLL  233 (488)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~  233 (488)
                                                                                                      
T Consensus       158 --------------------------------------------------------------------------------  157 (286)
T 1q7f_A          158 --------------------------------------------------------------------------------  157 (286)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccc--cccEEEEEe--cCCEEEEeecCC-eEEE
Q psy14511        234 VEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTH--MHQVIAMCW--NGNLLSCGTIGG-NILH  308 (488)
Q Consensus       234 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~--~~~v~~~~~--~~~~l~~~~~dg-~i~i  308 (488)
                       .... +...+..++++|+++.+++. ..++.|++||... +.+..+..+  ...+..+++  +++++++...++ .|.+
T Consensus       158 -~~~~-~~~~p~~i~~~~~g~l~v~~-~~~~~i~~~~~~g-~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~  233 (286)
T 1q7f_A          158 -GCSK-HLEFPNGVVVNDKQEIFISD-NRAHCVKVFNYEG-QYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTI  233 (286)
T ss_dssp             -ECTT-TCSSEEEEEECSSSEEEEEE-GGGTEEEEEETTC-CEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEE
T ss_pred             -CCCC-ccCCcEEEEECCCCCEEEEE-CCCCEEEEEcCCC-CEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEE
Confidence             0001 33457899999999866655 7789999999754 555555433  356788888  577888777775 9999


Q ss_pred             EECcCCCccceeeecCC--ccEEEEEEccCCcEEEEEecCeEEEEECCCC
Q psy14511        309 YDVRTHSDYPTAITREG--DVVCGLKWSPNGRYLASGSNNTVKIWDFRQL  356 (488)
Q Consensus       309 ~d~~~~~~~~~~~~~~~--~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~  356 (488)
                      ||...  .....+..+.  ..+.+++++|+|+++++..++.|++|++...
T Consensus       234 ~~~~g--~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~~~  281 (286)
T 1q7f_A          234 FTQDG--QLISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQL  281 (286)
T ss_dssp             ECTTS--CEEEEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEEECSCC
T ss_pred             ECCCC--CEEEEEcccCCCCcceeEEECCCCcEEEECCCCeEEEEEcccc
Confidence            99653  3344444332  3478999999998877754799999998653

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.69  E-value=1.2e-14  Score=129.15  Aligned_cols=238  Identities=8%  Similarity=-0.007  Sum_probs=166.9

Q ss_pred             CCCcEEEEE-CCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecccc-
Q psy14511        207 GYHDTLAVA-LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHM-  284 (488)
Q Consensus       207 ~~~~~~~~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~-  284 (488)
                      .++.++++. .++.|.+||..+++....+.    .......+++++++ .++++...++.|.+||..+++....+.... 
T Consensus        52 ~~~~lyv~~~~~~~v~viD~~t~~~~~~i~----~~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~  126 (328)
T 3dsm_A           52 RDGIGWIVVNNSHVIFAIDINTFKEVGRIT----GFTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYEITGYIECPDM  126 (328)
T ss_dssp             ETTEEEEEEGGGTEEEEEETTTCCEEEEEE----CCSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTTEEEEEEECTTC
T ss_pred             ECCEEEEEEcCCCEEEEEECcccEEEEEcC----CCCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCCeEEEEEEcCCc
Confidence            345666665 57899999999999877664    34568899999988 566662478999999999988777665332 


Q ss_pred             ----ccEEEEEecCCEEEEee--cCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-c----------Ce
Q psy14511        285 ----HQVIAMCWNGNLLSCGT--IGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-N----------NT  347 (488)
Q Consensus       285 ----~~v~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d----------~~  347 (488)
                          .....+++++..++.+.  .++.|.++|+.+.+ ....+.... ....++++|+|++++++. +          +.
T Consensus       127 ~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~-~~~~i~~g~-~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~  204 (328)
T 3dsm_A          127 DMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDK-VVDELTIGI-QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPS  204 (328)
T ss_dssp             CTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTE-EEEEEECSS-CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCE
T ss_pred             cccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCe-EEEEEEcCC-CccceEEcCCCCEEEEECCCccCCccccCCce
Confidence                13345556666666655  48899999998864 334443322 346789999999777765 3          68


Q ss_pred             EEEEECCCCCCCcccce------eeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEE--EeeccccEEEEEEcC-CCC
Q psy14511        348 VKIWDFRQLDAKRPLGL------IVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEE--LKIHQERILSAVLSP-DQT  418 (488)
Q Consensus       348 i~iwd~~~~~~~~~~~~------~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~--~~~~~~~v~~~~~s~-~~~  418 (488)
                      |.++|..+.+....+..      ...+++|+++.++++.    +.|.+||..+++....  +..+......++++| +++
T Consensus       205 v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~----~~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~  280 (328)
T 3dsm_A          205 LYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWIN----NDIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGE  280 (328)
T ss_dssp             EEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEES----SSEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCC
T ss_pred             EEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEc----cEEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCe
Confidence            99999988765444332      1228999999998852    2899999988875421  222245688999999 555


Q ss_pred             EEEEE----eCCCcEEEEecCCCCccccccccCCcceEEeec
Q psy14511        419 CVAAA----SADETISIWNCFPRDKKRKARQVGSGSSLEFAI  456 (488)
Q Consensus       419 ~l~t~----~~dg~v~iw~~~~~~~~~~~~~~~~v~~~~~s~  456 (488)
                      ++++.    ..++.|.+||.. ++.............++|..
T Consensus       281 lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~G~~P~~~~~~~  321 (328)
T 3dsm_A          281 VYVADAIDYQQQGIVYRYSPQ-GKLIDEFYVGIIPGAFCWKL  321 (328)
T ss_dssp             EEEEECTTSSSEEEEEEECTT-CCEEEEEEEEESEEEEEEEC
T ss_pred             EEEEcccccccCCEEEEECCC-CCEEEEEEeccCcceEEEec
Confidence            55665    578999999998 77665554444555566543

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.68  E-value=7.2e-14  Score=138.15  Aligned_cols=185  Identities=9%  Similarity=0.008  Sum_probs=121.8

Q ss_pred             eEEEEEcCCCCeEEEEeCCCCc----------------EEEEECCcce----eeeeeccccccEEEEEe--cCCEEEEee
Q psy14511        244 ISCVAWKPRTTDLAVTNTCTEY----------------IDLWHEQEER----LIQKLRTHMHQVIAMCW--NGNLLSCGT  301 (488)
Q Consensus       244 i~~~~~~~~~~~l~~~~~~~~~----------------i~i~d~~~~~----~~~~~~~~~~~v~~~~~--~~~~l~~~~  301 (488)
                      +..++|+|||+.|+.+ +.++.                |++|++.+++    .+.....+...+..+.|  ||++|+..+
T Consensus       173 ~~~~~wspDg~~l~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~  251 (710)
T 2xdw_A          173 FSCMAWTHDGKGMFYN-AYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSI  251 (710)
T ss_dssp             SCCEEECTTSSEEEEE-ECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEE
T ss_pred             cceEEEEeCCCEEEEE-EECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEE
Confidence            4568899999999988 55554                9999998765    22222334555667777  788888776


Q ss_pred             c-----CCeEEEEECcC------CCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccceeeeeec
Q psy14511        302 I-----GGNILHYDVRT------HSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLK  370 (488)
Q Consensus       302 ~-----dg~i~i~d~~~------~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~  370 (488)
                      .     +..|++||+.+      +......+..+...+.. .|+|+|+.|+..++.                        
T Consensus       252 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~------------------------  306 (710)
T 2xdw_A          252 REGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNR------------------------  306 (710)
T ss_dssp             ECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECT------------------------
T ss_pred             EccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECC------------------------
Confidence            5     56899999986      43235555555555544 478888877766420                        


Q ss_pred             CCCCEEEEEccCCCCeEEEEeCCCcc--eeEEEeeccc--cEEEEEEcCCCCEEEEEeCCCc--EEEEecCCCCcc-ccc
Q psy14511        371 REGRELVTSHGKQDCSLKMWEYPRLH--LIEELKIHQE--RILSAVLSPDQTCVAAASADET--ISIWNCFPRDKK-RKA  443 (488)
Q Consensus       371 ~~~~~l~~~~g~~~~~i~i~d~~~~~--~~~~~~~~~~--~v~~~~~s~~~~~l~t~~~dg~--v~iw~~~~~~~~-~~~  443 (488)
                                +...+.|.+||+.+++  ....+..|..  .+..++|++++.++++...|+.  |++|++.+++.. ...
T Consensus       307 ----------~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~  376 (710)
T 2xdw_A          307 ----------HSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFP  376 (710)
T ss_dssp             ----------TCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEEC
T ss_pred             ----------CCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecC
Confidence                      1123455566655543  2344444533  6888999988888889988885  566777566643 333


Q ss_pred             cccCCcceEEeecCCCceEEE
Q psy14511        444 RQVGSGSSLEFAILKQPVSLT  464 (488)
Q Consensus       444 ~~~~~v~~~~~s~~~~~~~~~  464 (488)
                      .+.+.+..+.++|++..+.+.
T Consensus       377 ~~~~~v~~~~~s~d~~~l~~~  397 (710)
T 2xdw_A          377 LEVGSVVGYSGQKKDTEIFYQ  397 (710)
T ss_dssp             CCSSEEEEEECCTTCSEEEEE
T ss_pred             CCCceEEEEecCCCCCEEEEE
Confidence            345667888899988766543

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.67  E-value=9.6e-13  Score=115.67  Aligned_cols=268  Identities=11%  Similarity=0.022  Sum_probs=171.1

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSA   82 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~   82 (488)
                      +|+++++...++.|.+||.. ++........+...+.+++++++|++.++.. ++.|..||.. ++ ...+ .+......
T Consensus        25 ~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~-~~~~-~~~~~~~~  100 (299)
T 2z2n_A           25 KGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GI-IKEY-TLPNPDSA  100 (299)
T ss_dssp             TSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC-EEEE-ECSSTTCC
T ss_pred             CCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-Cc-EEEE-eCCCcCCC
Confidence            67877766667899999988 4422222233456799999999999888876 7899999975 22 1111 12223457


Q ss_pred             eeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccc
Q psy14511         83 VKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQS  162 (488)
Q Consensus        83 v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (488)
                      +..+++.+++..+++...   ++.|..||. +++...                                           
T Consensus       101 ~~~i~~~~~g~l~v~~~~---~~~i~~~d~-~g~~~~-------------------------------------------  133 (299)
T 2z2n_A          101 PYGITEGPNGDIWFTEMN---GNRIGRITD-DGKIRE-------------------------------------------  133 (299)
T ss_dssp             EEEEEECTTSCEEEEETT---TTEEEEECT-TCCEEE-------------------------------------------
T ss_pred             ceeeEECCCCCEEEEecC---CceEEEECC-CCCEEE-------------------------------------------
Confidence            889999998865444433   678888886 443210                                           


Q ss_pred             cccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCC
Q psy14511        163 KRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNA  242 (488)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~  242 (488)
                                                                                             +..+. ...
T Consensus       134 -----------------------------------------------------------------------~~~~~-~~~  141 (299)
T 2z2n_A          134 -----------------------------------------------------------------------YELPN-KGS  141 (299)
T ss_dssp             -----------------------------------------------------------------------EECSS-TTC
T ss_pred             -----------------------------------------------------------------------ecCCC-CCC
Confidence                                                                                   00011 234


Q ss_pred             ceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeee-eccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccce
Q psy14511        243 YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQK-LRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPT  319 (488)
Q Consensus       243 ~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~-~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~  319 (488)
                      .+..+++.++++..++. ..++.|..||. +++.... .......+..+++  ++++.++...++.|.+||. ++.....
T Consensus       142 ~~~~i~~~~~g~l~v~~-~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~  218 (299)
T 2z2n_A          142 YPSFITLGSDNALWFTE-NQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEF  218 (299)
T ss_dssp             CEEEEEECTTSCEEEEE-TTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEE
T ss_pred             CCceEEEcCCCCEEEEe-CCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEE
Confidence            57889999998766666 67789999998 5544332 3334456778888  4676666666889999998 5432222


Q ss_pred             eeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCccee
Q psy14511        320 AITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLI  398 (488)
Q Consensus       320 ~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~  398 (488)
                      ....+...+.+++++++|+++++.. ++.|..||.. +                             .+..+.+      
T Consensus       219 ~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~-g-----------------------------~~~~~~~------  262 (299)
T 2z2n_A          219 KIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTSN-N-----------------------------IIEEYPI------  262 (299)
T ss_dssp             ECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEETT-T-----------------------------EEEEEEC------
T ss_pred             ECCCCCCCceeEEECCCCCEEEeccCCceEEEECCC-C-----------------------------ceEEEeC------
Confidence            2233446688999999998666654 4777777752 1                             1222221      


Q ss_pred             EEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCC
Q psy14511        399 EELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRD  438 (488)
Q Consensus       399 ~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~  438 (488)
                         ..+...+.++++ ++++++++.+ .+.+..++..+++
T Consensus       263 ---~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~~~  297 (299)
T 2z2n_A          263 ---QIKSAEPHGICF-DGETIWFAME-CDKIGKLTLIKDN  297 (299)
T ss_dssp             ---SSSSCCEEEEEE-CSSCEEEEET-TTEEEEEEEC---
T ss_pred             ---CCCCCccceEEe-cCCCEEEEec-CCcEEEEEcCccc
Confidence               123356888999 8888777665 5667777776543

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=99.67  E-value=1.3e-12  Score=117.63  Aligned_cols=221  Identities=11%  Similarity=0.005  Sum_probs=149.5

Q ss_pred             CCeEEEEECCCCceEEEEecCCC-C---CCceEEEEEcCCCCeEEEEeCC-CCcEEEEECCcceeeee-eccccccEEEE
Q psy14511        217 DTSVYTWNTKTNKTQLLVEYPTY-D---NAYISCVAWKPRTTDLAVTNTC-TEYIDLWHEQEERLIQK-LRTHMHQVIAM  290 (488)
Q Consensus       217 d~~v~iw~~~~~~~~~~~~~~~~-~---~~~i~~~~~~~~~~~l~~~~~~-~~~i~i~d~~~~~~~~~-~~~~~~~v~~~  290 (488)
                      ++.|.+||..+.+....+...+. .   ......++++|||++|+++... ++.|.++| .+++.+.. +... ..+...
T Consensus        96 ~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~-~~~~~~  173 (373)
T 2mad_H           96 TDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP-TCYHIH  173 (373)
T ss_pred             CCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC-ceEEEE
Confidence            67899999998887776665310 1   1235589999999999998333 57899999 99888777 6432 222222


Q ss_pred             EecCCEEEEeecCCeEEEEECcCCCccceeee-----cCCcc-EEEEEEccCCcEEEEEe-cCeEEEEECCCCCCC--cc
Q psy14511        291 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAIT-----REGDV-VCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAK--RP  361 (488)
Q Consensus       291 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-----~~~~~-i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~--~~  361 (488)
                      ....+.+++.+.||.+.++|. +++.. ....     ....+ .....+.+++..++..+ .+.+.+.|+......  ..
T Consensus       174 ~~~~~~~~~~~~dg~~~~vd~-~g~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~  251 (373)
T 2mad_H          174 PGAPSTFYLLCAQGGLAKTDH-AGGAA-GAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAP  251 (373)
T ss_pred             eCCCceEEEEcCCCCEEEEEC-CCcEE-EEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeee
Confidence            224566777888999999999 65432 1111     11122 23355677665544444 588999998654211  11


Q ss_pred             cc---------------eeeeeecCCCCEEEEEccC--------CCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCC
Q psy14511        362 LG---------------LIVPKLKREGRELVTSHGK--------QDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQT  418 (488)
Q Consensus       362 ~~---------------~~~~~~~~~~~~l~~~~g~--------~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~  418 (488)
                      +.               .....++|+++.++++...        ..+.|.++|..+++.+.++.. ......++|+|||+
T Consensus       252 ~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~-g~~p~~i~~s~Dg~  330 (373)
T 2mad_H          252 IDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL-GHDVDAISVAQDGG  330 (373)
T ss_pred             eeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC-CCCcCeEEECCCCC
Confidence            10               1113678898888875321        246899999999999988853 33589999999999


Q ss_pred             -EEEEEe-CCCcEEEEecCCCCcccc
Q psy14511        419 -CVAAAS-ADETISIWNCFPRDKKRK  442 (488)
Q Consensus       419 -~l~t~~-~dg~v~iw~~~~~~~~~~  442 (488)
                       +++++. .++.|.++|+.+++....
T Consensus       331 ~~l~v~~~~~~~V~ViD~~t~~vv~~  356 (373)
T 2mad_H          331 PDLYALSAGTEVLHIYDAGAGDQDQS  356 (373)
T ss_pred             eEEEEEcCCCCeEEEEECCCCCEEee
Confidence             777776 589999999999988755

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=99.67  E-value=2.5e-13  Score=120.28  Aligned_cols=272  Identities=11%  Similarity=-0.048  Sum_probs=167.2

Q ss_pred             cCCceEEEeec-----CCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-----------CCeEEEEeccc
Q psy14511          3 WNGNLLSCGTI-----GGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-----------NNTVKIWDFRQ   66 (488)
Q Consensus         3 ~dg~~la~g~~-----dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-----------d~~i~vwd~~~   66 (488)
                      +|++.+.+...     ++.|.+.|..+.+.+..+-.+. .+ . +++||||++|..+.           ++.|.+||..+
T Consensus        42 pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~-~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t  118 (386)
T 3sjl_D           42 PDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGF-LP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVT  118 (386)
T ss_dssp             CCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECS-SC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred             CCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCC-CC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCC
Confidence            47877776654     6899999999988654443333 34 4 99999999876653           57899999998


Q ss_pred             cCcCCCcccccc----cccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccce
Q psy14511         67 LDAKRPQVNNQC----HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRR  142 (488)
Q Consensus        67 ~~~~~~~~~~~~----h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (488)
                      .+....+....+    .......+.|+|||++++++... .++.|.++|+.+++.+.++.....    ..+         
T Consensus       119 ~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~-~~~~VsVID~~t~~vv~tI~v~g~----~~~---------  184 (386)
T 3sjl_D          119 LLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS-PAPAVGVVDLEGKAFKRMLDVPDC----YHI---------  184 (386)
T ss_dssp             CCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS-SSCEEEEEETTTTEEEEEEECCSE----EEE---------
T ss_pred             CeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcC-CCCeEEEEECCCCcEEEEEECCCc----cee---------
Confidence            654433321110    11245679999999998887631 168999999999998877754310    000         


Q ss_pred             eEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEE
Q psy14511        143 HLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYT  222 (488)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i  222 (488)
                                                                                   .......+++.+.||++.+
T Consensus       185 -------------------------------------------------------------~P~g~~~~~~~~~DG~~~~  203 (386)
T 3sjl_D          185 -------------------------------------------------------------FPTAPDTFFMHCRDGSLAK  203 (386)
T ss_dssp             -------------------------------------------------------------EEEETTEEEEEETTSCEEE
T ss_pred             -------------------------------------------------------------ecCCCceeEEECCCCCEEE
Confidence                                                                         0111245678888999999


Q ss_pred             EECCC-CceEEEEe-cCCCCCCceE-EEEEc-CCCCeEEEEeCCCCcEEEEECCcce--eeeeec------------ccc
Q psy14511        223 WNTKT-NKTQLLVE-YPTYDNAYIS-CVAWK-PRTTDLAVTNTCTEYIDLWHEQEER--LIQKLR------------THM  284 (488)
Q Consensus       223 w~~~~-~~~~~~~~-~~~~~~~~i~-~~~~~-~~~~~l~~~~~~~~~i~i~d~~~~~--~~~~~~------------~~~  284 (488)
                      .++.+ ++...... .......++. ...|. ++|+.+++  +.+|.|.+.|+.+..  ....+.            ...
T Consensus       204 v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~v--s~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g  281 (386)
T 3sjl_D          204 VAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWP--TYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGG  281 (386)
T ss_dssp             EECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEE--BTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECS
T ss_pred             EECCCCCeEEEeecceeccccccccccceeEcCCCcEEEE--eCCCEEEEEECCCCcceeecceeccccccccccccCCC
Confidence            99876 55432221 1000122222 23554 67755554  468999999987643  333222            111


Q ss_pred             ccEEEEEecCCEEEEeec----------CCeEEEEECcCCCccceeeecCCccEEEEEEccCCc-EEEEEe--cCeEEEE
Q psy14511        285 HQVIAMCWNGNLLSCGTI----------GGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGR-YLASGS--NNTVKIW  351 (488)
Q Consensus       285 ~~v~~~~~~~~~l~~~~~----------dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~--d~~i~iw  351 (488)
                      ....++..+++.++....          .+.|.++|+.+.+.......++  .+++++++||++ +|+++.  ++.|.++
T Consensus       282 ~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~--~~~~lavs~D~~~~ly~tn~~~~~VsVi  359 (386)
T 3sjl_D          282 WQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH--EIDSINVSQDEKPLLYALSTGDKTLYIH  359 (386)
T ss_dssp             SSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE--EECEEEECSSSSCEEEEEETTTTEEEEE
T ss_pred             cceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCC--CcceEEECCCCCeEEEEEcCCCCeEEEE
Confidence            123444446666666542          2579999998865333333332  577899999986 666653  2555555


Q ss_pred             ECCCC
Q psy14511        352 DFRQL  356 (488)
Q Consensus       352 d~~~~  356 (488)
                      |..++
T Consensus       360 D~~t~  364 (386)
T 3sjl_D          360 DAESG  364 (386)
T ss_dssp             ETTTC
T ss_pred             ECCCC
Confidence            55443

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=99.65  E-value=5.9e-13  Score=120.23  Aligned_cols=238  Identities=13%  Similarity=0.103  Sum_probs=163.8

Q ss_pred             CCCeEEEEECCCCceEEEEecCCCC----CCceEEEEEcCCCCeEEEEeCC-CCcEEEEECCcceeeeeeccccccEEEE
Q psy14511        216 LDTSVYTWNTKTNKTQLLVEYPTYD----NAYISCVAWKPRTTDLAVTNTC-TEYIDLWHEQEERLIQKLRTHMHQVIAM  290 (488)
Q Consensus       216 ~d~~v~iw~~~~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~~~-~~~i~i~d~~~~~~~~~~~~~~~~v~~~  290 (488)
                      .++.|.++|..+.+....+.+.+..    ......++++|||++++++... ++.|.+.|+.+.+.+..+.....  ..+
T Consensus       147 ~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~--~~~  224 (426)
T 3c75_H          147 RTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC--YHI  224 (426)
T ss_dssp             EEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE--EEE
T ss_pred             CCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc--eee
Confidence            3678999999999988877764101    1235578999999999998333 67899999999998888764222  233


Q ss_pred             Ee-cCCEEEEeecCCeEEEEECcCCCccce----eeecCCccE-EEEEEccCCcEEEEEec-CeEEEEECCCCCCC--cc
Q psy14511        291 CW-NGNLLSCGTIGGNILHYDVRTHSDYPT----AITREGDVV-CGLKWSPNGRYLASGSN-NTVKIWDFRQLDAK--RP  361 (488)
Q Consensus       291 ~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~----~~~~~~~~i-~~~~~s~~~~~l~~~~d-~~i~iwd~~~~~~~--~~  361 (488)
                      .. ..+.+++.+.||.+.+.+...++ ...    .+.....++ ..+.+++++..++..+. +.+.+.|+......  ..
T Consensus       225 ~p~g~~~~v~~~~dG~~~~V~~~~~~-v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~  303 (426)
T 3c75_H          225 FPASPTVFYMNCRDGSLARVDFADGE-TKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAP  303 (426)
T ss_dssp             EEEETTEEEEEETTSSEEEEECCTTC-CEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCC
T ss_pred             ccCCCcEEEEEcCCCCEEEEECCCCc-EEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeee
Confidence            33 34677778889988888884432 221    111111111 23567899888777774 99999998643210  10


Q ss_pred             cc---------------eeeeeecCCCCEEEEEccC--------CCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCC
Q psy14511        362 LG---------------LIVPKLKREGRELVTSHGK--------QDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQT  418 (488)
Q Consensus       362 ~~---------------~~~~~~~~~~~~l~~~~g~--------~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~  418 (488)
                      +.               .....++|+++.++++...        ..+.|.++|..+.+.+.++.... ....++|+||++
T Consensus       304 ~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~-~P~gia~spDg~  382 (426)
T 3c75_H          304 IEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH-EIDSINVSQDAE  382 (426)
T ss_dssp             EESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-EECEEEECCSSS
T ss_pred             eeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC-CcCeEEEccCCC
Confidence            00               0013789999988875321        23579999999999999886433 488999999999


Q ss_pred             -EEEEEe-CCCcEEEEecCCCCccccccccCCcceEEeecC
Q psy14511        419 -CVAAAS-ADETISIWNCFPRDKKRKARQVGSGSSLEFAIL  457 (488)
Q Consensus       419 -~l~t~~-~dg~v~iw~~~~~~~~~~~~~~~~v~~~~~s~~  457 (488)
                       +++++. .++.|.++|+.+++........+.-..+..+||
T Consensus       383 ~~lyv~n~~s~~VsVID~~t~kvv~tI~~vG~~P~~i~~~~  423 (426)
T 3c75_H          383 PLLYALSAGTQTLHIYDAATGEELRSVDQLGRGPQIITTHD  423 (426)
T ss_dssp             CEEEEEETTTTEEEEEETTTCCEEEEECCCSSSCCEEECCC
T ss_pred             EEEEEEcCCCCeEEEEECCCCCEEEEecCCCCCCcEEEcCC
Confidence             888887 589999999999998866433344444666664

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.64  E-value=3.8e-13  Score=117.99  Aligned_cols=241  Identities=9%  Similarity=-0.005  Sum_probs=155.3

Q ss_pred             eeecccCceEEEEEEccCCc-EEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceE
Q psy14511         30 TAITREGDVVCGLKWSPNGR-YLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTV  107 (488)
Q Consensus        30 ~~~~~h~~~V~~l~~sp~g~-~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i  107 (488)
                      ..+..+.....+++|+|+|+ +++++. ++.|..||..++     ...+..+...+.+++++|+|+.+++...   ++.|
T Consensus        21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-----~~~~~~~~~~~~~l~~~~dg~l~v~~~~---~~~i   92 (296)
T 3e5z_A           21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-----LSPEMHPSHHQNGHCLNKQGHLIACSHG---LRRL   92 (296)
T ss_dssp             EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-----EEEEESSCSSEEEEEECTTCCEEEEETT---TTEE
T ss_pred             EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-----eEEEECCCCCcceeeECCCCcEEEEecC---CCeE
Confidence            44555666788999999998 666666 899999998864     2223446678999999999975544433   7899


Q ss_pred             EEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCc
Q psy14511        108 RLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPE  187 (488)
Q Consensus       108 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (488)
                      .+||..+++.............                                                          
T Consensus        93 ~~~d~~~g~~~~~~~~~~~~~~----------------------------------------------------------  114 (296)
T 3e5z_A           93 ERQREPGGEWESIADSFEGKKL----------------------------------------------------------  114 (296)
T ss_dssp             EEECSTTCCEEEEECEETTEEC----------------------------------------------------------
T ss_pred             EEEcCCCCcEEEEeeccCCCCC----------------------------------------------------------
Confidence            9999977764332211100000                                                          


Q ss_pred             eeecCCCccccceeeeeeeC-CCcEEEEE------------------CCCeEEEEECCCCceEEEEecCCCCCCceEEEE
Q psy14511        188 RILEAPSIINDFYTSGLDWG-YHDTLAVA------------------LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVA  248 (488)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~------------------~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~  248 (488)
                                 .....+.++ .+.++++.                  ..+.|..++.. ++......    .......++
T Consensus       115 -----------~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~----~~~~~~gi~  178 (296)
T 3e5z_A          115 -----------NSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIR----DRVKPNGLA  178 (296)
T ss_dssp             -----------CCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEEC----CCSSEEEEE
T ss_pred             -----------CCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeec----CCCCCccEE
Confidence                       000011111 13344421                  13466666665 44333322    455678999


Q ss_pred             EcCCCCeEEEEeCCCCcEEEEECC-ccee---eeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeee
Q psy14511        249 WKPRTTDLAVTNTCTEYIDLWHEQ-EERL---IQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAIT  322 (488)
Q Consensus       249 ~~~~~~~l~~~~~~~~~i~i~d~~-~~~~---~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~  322 (488)
                      |+|+++.+++. +.++.|.+|++. .++.   ...+..+...+..+++  +|+++++.  ++.|.+||...  .....+.
T Consensus       179 ~s~dg~~lv~~-~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~g--~~~~~~~  253 (296)
T 3e5z_A          179 FLPSGNLLVSD-TGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPDG--DELGRVL  253 (296)
T ss_dssp             ECTTSCEEEEE-TTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTTS--CEEEEEE
T ss_pred             ECCCCCEEEEe-CCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCCC--CEEEEEE
Confidence            99999999544 788999999986 3333   2233233444556777  57665555  88899999863  3555666


Q ss_pred             cCCccEEEEEE-ccCCcEEEEEecCeEEEEECCCCCC
Q psy14511        323 REGDVVCGLKW-SPNGRYLASGSNNTVKIWDFRQLDA  358 (488)
Q Consensus       323 ~~~~~i~~~~~-s~~~~~l~~~~d~~i~iwd~~~~~~  358 (488)
                      .+.. +.+++| +|+++.|++++.+.+..++.++...
T Consensus       254 ~~~~-~~~~~f~~~d~~~L~v~t~~~l~~~~~~~~~~  289 (296)
T 3e5z_A          254 TPQT-TSNLCFGGPEGRTLYMTVSTEFWSIETNVRGL  289 (296)
T ss_dssp             CSSC-CCEEEEESTTSCEEEEEETTEEEEEECSCCBC
T ss_pred             CCCC-ceeEEEECCCCCEEEEEcCCeEEEEEcccccc
Confidence            6666 888999 5899999888877777777776544

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.63  E-value=2e-14  Score=141.69  Aligned_cols=232  Identities=8%  Similarity=-0.071  Sum_probs=149.1

Q ss_pred             ccCCceEE-----EeecCCeEEEEEcccCccc-ceeecccCceEEEEEEccCCcEEEEec-CCe-------------EEE
Q psy14511          2 CWNGNLLS-----CGTIGGNILHYDVRTHSDY-PTAITREGDVVCGLKWSPNGRYLASGS-NNT-------------VKI   61 (488)
Q Consensus         2 ~~dg~~la-----~g~~dg~i~iwd~~~~~~~-~~~~~~h~~~V~~l~~sp~g~~las~~-d~~-------------i~v   61 (488)
                      +.||++||     .|+.+..|++||+.+++.+ ...+....  ...++|+|||+.|+.++ |..             |++
T Consensus       129 SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~--~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~  206 (695)
T 2bkl_A          129 SWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGK--YATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRY  206 (695)
T ss_dssp             CTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCT--TCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEE
T ss_pred             CCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCccc--ccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEE
Confidence            45999999     4455678999999998754 22222221  26789999999999887 554             999


Q ss_pred             EeccccCcC-CCcccccccccceeEEEEecCCCeEEeeeCCcccc----eEEEEecCCCeeeeeeecCCCcccccccccc
Q psy14511         62 WDFRQLDAK-RPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQ----TVRLWNSMNGKEKCHVKTDSQQANDETISYR  136 (488)
Q Consensus        62 wd~~~~~~~-~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~  136 (488)
                      |++.++... ..+.....|...+..+.|+|||++|+++..   ++    .|.+|+..+++.                   
T Consensus       207 ~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~---~~~~~~~l~~~~~~~~~~-------------------  264 (695)
T 2bkl_A          207 HTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYIL---RGWSENDVYWKRPGEKDF-------------------  264 (695)
T ss_dssp             EETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEE---ETTTEEEEEEECTTCSSC-------------------
T ss_pred             EECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEe---CCCCceEEEEEcCCCCce-------------------
Confidence            999876532 233334456667899999999999888776   43    455554322221                   


Q ss_pred             ccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEEC
Q psy14511        137 EQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVAL  216 (488)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (488)
                                                                                                      
T Consensus       265 --------------------------------------------------------------------------------  264 (695)
T 2bkl_A          265 --------------------------------------------------------------------------------  264 (695)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeC---CCCcEEEEECCccee---eeeeccc-cccEEE
Q psy14511        217 DTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNT---CTEYIDLWHEQEERL---IQKLRTH-MHQVIA  289 (488)
Q Consensus       217 d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---~~~~i~i~d~~~~~~---~~~~~~~-~~~v~~  289 (488)
                                    ..+..    +...+....+ ++++ +++...   .++.|.+||+.++..   ...+..+ ...+..
T Consensus       265 --------------~~l~~----~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~  324 (695)
T 2bkl_A          265 --------------RLLVK----GVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLS  324 (695)
T ss_dssp             --------------EEEEE----CSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEE
T ss_pred             --------------EEeec----CCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEE
Confidence                          11111    2223334445 5555 554424   357899999877642   2233333 445777


Q ss_pred             EEe-cCCEEEEeecCCeEEEEECcCCCccceeeecC-CccEEEEEEccCCcEEEEEe----c-CeEEEEECCCCC
Q psy14511        290 MCW-NGNLLSCGTIGGNILHYDVRTHSDYPTAITRE-GDVVCGLKWSPNGRYLASGS----N-NTVKIWDFRQLD  357 (488)
Q Consensus       290 ~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~~i~~~~~s~~~~~l~~~~----d-~~i~iwd~~~~~  357 (488)
                      +++ ++.++++...|+..++|.+.........+..+ ...+..++++|+++.++...    . +++++||+.+++
T Consensus       325 ~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~  399 (695)
T 2bkl_A          325 VSIVGGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK  399 (695)
T ss_dssp             EEEETTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC
T ss_pred             EEEECCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence            777 56778888889988888665322233444433 56677888999997666332    2 789999998764

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.62  E-value=1.1e-12  Score=115.06  Aligned_cols=189  Identities=11%  Similarity=0.073  Sum_probs=127.7

Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccc----cccEEEEEe--cCCEEEE----eec-------
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTH----MHQVIAMCW--NGNLLSC----GTI-------  302 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~----~~~v~~~~~--~~~~l~~----~~~-------  302 (488)
                      +...+.+++++|+|+.+++. ..++.|.+||..+++........    ...+..+++  +|+++++    |+.       
T Consensus        67 ~~~~~~~l~~~~dg~l~v~~-~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~  145 (296)
T 3e5z_A           67 PSHHQNGHCLNKQGHLIACS-HGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYG  145 (296)
T ss_dssp             SCSSEEEEEECTTCCEEEEE-TTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSC
T ss_pred             CCCCcceeeECCCCcEEEEe-cCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCcccccccccccc
Confidence            33457899999999877666 66789999998776654333221    123445666  6777776    331       


Q ss_pred             ------CCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECC-CCCC---Ccccc---e--ee
Q psy14511        303 ------GGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFR-QLDA---KRPLG---L--IV  366 (488)
Q Consensus       303 ------dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~-~~~~---~~~~~---~--~~  366 (488)
                            .+.|..++.. +  ....+..+......++|+|+++.+++.+ ++.|.+|++. ++..   ...+.   .  ..
T Consensus       146 ~~~~~~~~~l~~~~~~-g--~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~  222 (296)
T 3e5z_A          146 GEMELPGRWVFRLAPD-G--TLSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDG  222 (296)
T ss_dssp             CCCCSSSCEEEEECTT-S--CEEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCS
T ss_pred             ccccCCCcEEEEECCC-C--CEEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCe
Confidence                  3456666654 2  2334455566678999999999985555 4899999987 3322   11110   0  01


Q ss_pred             eeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEE-cCCCCEEEEEeCCCcEEEEecCCCCc
Q psy14511        367 PKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVL-SPDQTCVAAASADETISIWNCFPRDK  439 (488)
Q Consensus       367 ~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~-s~~~~~l~t~~~dg~v~iw~~~~~~~  439 (488)
                      .+++++|+..++  .  ++.|.+||.. ++.+..+..+.. +++++| +|+++.|+.++.++ +.-++..+.+.
T Consensus       223 i~~d~~G~l~v~--~--~~~v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~~~  289 (296)
T 3e5z_A          223 LRVDAGGLIWAS--A--GDGVHVLTPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTE-FWSIETNVRGL  289 (296)
T ss_dssp             EEEBTTSCEEEE--E--TTEEEEECTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEETTE-EEEEECSCCBC
T ss_pred             EEECCCCCEEEE--c--CCeEEEECCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCe-EEEEEcccccc
Confidence            288899987666  2  7889999986 788888887777 999999 58999998888764 44445554443

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=99.62  E-value=4e-12  Score=114.43  Aligned_cols=272  Identities=10%  Similarity=-0.035  Sum_probs=158.3

Q ss_pred             cCCceEEEeec--CC---eEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-----------CCeEEEEeccc
Q psy14511          3 WNGNLLSCGTI--GG---NILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-----------NNTVKIWDFRQ   66 (488)
Q Consensus         3 ~dg~~la~g~~--dg---~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-----------d~~i~vwd~~~   66 (488)
                      .|++++.+...  .+   .|.++|..+++.+ ..+.....+  .+++||||++|+.+.           ++.|.+||..+
T Consensus        30 ~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~-~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t  106 (373)
T 2mad_H           30 ADGRRSYINLPAHHSAIIQQWVLDAGSGSIL-GHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT  106 (373)
T ss_pred             CCCCEEEEeCCcccCCccEEEEEECCCCeEE-EEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC
Confidence            46776666543  22   8899999988854 334333333  899999999988874           46799999987


Q ss_pred             cCcCCCcccc-cc---cccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeee-eecCCCccccccccccccccc
Q psy14511         67 LDAKRPQVNN-QC---HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCH-VKTDSQQANDETISYREQKKR  141 (488)
Q Consensus        67 ~~~~~~~~~~-~~---h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  141 (488)
                      .+....+... ..   +......+.|+|||++|+++... .++.|.++| .+++.+.. +...                 
T Consensus       107 ~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~-~~~~v~viD-~t~~~~~~~i~~~-----------------  167 (373)
T 2mad_H          107 FLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFA-AGPAVGLVV-QGGSSDDQLLSSP-----------------  167 (373)
T ss_pred             CcEEEEEECCCccccccCCCccceEECCCCCEEEEEecC-CCCeEEEEE-CCCCEEeEEcCCC-----------------
Confidence            5443322211 00   01234588999999998887641 147788898 87765433 2111                 


Q ss_pred             eeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEE
Q psy14511        142 RHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVY  221 (488)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~  221 (488)
                                                                                                      
T Consensus       168 --------------------------------------------------------------------------------  167 (373)
T 2mad_H          168 --------------------------------------------------------------------------------  167 (373)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeec-----cccccE-EEEEe--c
Q psy14511        222 TWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLR-----THMHQV-IAMCW--N  293 (488)
Q Consensus       222 iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~-----~~~~~v-~~~~~--~  293 (488)
                                          .   ++.+.|+++..++..+.||.+.++|. +++......     ....++ ....+  +
T Consensus       168 --------------------~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~  223 (373)
T 2mad_H          168 --------------------T---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANK  223 (373)
T ss_pred             --------------------c---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEec
Confidence                                0   12222333222222244555555555 443332111     111111 11111  3


Q ss_pred             CCEEEEeecCCeEEEEECcCCCc-cceeeec----------CCccEEEEEEccCCcEEEEEec-----------CeEEEE
Q psy14511        294 GNLLSCGTIGGNILHYDVRTHSD-YPTAITR----------EGDVVCGLKWSPNGRYLASGSN-----------NTVKIW  351 (488)
Q Consensus       294 ~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~~----------~~~~i~~~~~s~~~~~l~~~~d-----------~~i~iw  351 (488)
                      +..++..+..+.+.+.|+..... ....+..          .......++++|+++.+.+..+           +.|.++
T Consensus       224 ~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VI  303 (373)
T 2mad_H          224 SGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSV  303 (373)
T ss_pred             CCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEE
Confidence            33333333567788888764321 1111110          1122445789999988777542           479999


Q ss_pred             ECCCCCCCccccee----eeeecCCCC-EEEEEccCCCCeEEEEeCCCcceeEEE
Q psy14511        352 DFRQLDAKRPLGLI----VPKLKREGR-ELVTSHGKQDCSLKMWEYPRLHLIEEL  401 (488)
Q Consensus       352 d~~~~~~~~~~~~~----~~~~~~~~~-~l~~~~g~~~~~i~i~d~~~~~~~~~~  401 (488)
                      |..+.+....+...    ...|+|||+ .++++ ...++.|.++|+.+++.+.++
T Consensus       304 D~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~-~~~~~~V~ViD~~t~~vv~~i  357 (373)
T 2mad_H          304 TGLVGQTSSQISLGHDVDAISVAQDGGPDLYAL-SAGTEVLHIYDAGAGDQDQST  357 (373)
T ss_pred             ECCCCEEEEEEECCCCcCeEEECCCCCeEEEEE-cCCCCeEEEEECCCCCEEeee
Confidence            99988665544322    229999999 55553 446899999999999988774

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.60  E-value=1.5e-11  Score=107.96  Aligned_cols=262  Identities=7%  Similarity=-0.034  Sum_probs=168.6

Q ss_pred             ccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEec
Q psy14511         34 REGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNS  112 (488)
Q Consensus        34 ~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~  112 (488)
                      .+...+.+++++++|++.++.. ++.|.+||.. ++.. .. ....+...+.++++.+++..+++...   ++.|..|+.
T Consensus        12 ~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~-~~-~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~i~~~~~   85 (299)
T 2z2n_A           12 NQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKIT-EY-PLPTPDAKVMCLTISSDGEVWFTENA---ANKIGRITK   85 (299)
T ss_dssp             SSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEE-EE-ECSSTTCCEEEEEECTTSCEEEEETT---TTEEEEECT
T ss_pred             CcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeE-Ee-cCCcccCceeeEEECCCCCEEEeCCC---CCeEEEECC
Confidence            3445789999999999888776 7899999987 3321 11 11224467899999999875555443   678888886


Q ss_pred             CCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecC
Q psy14511        113 MNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEA  192 (488)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (488)
                      . ++. ..                                                                        
T Consensus        86 ~-g~~-~~------------------------------------------------------------------------   91 (299)
T 2z2n_A           86 K-GII-KE------------------------------------------------------------------------   91 (299)
T ss_dssp             T-SCE-EE------------------------------------------------------------------------
T ss_pred             C-CcE-EE------------------------------------------------------------------------
Confidence            4 221 00                                                                        


Q ss_pred             CCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECC
Q psy14511        193 PSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQ  272 (488)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~  272 (488)
                                                               +..+. ....+..+++.++++..++. ..++.|..||. 
T Consensus        92 -----------------------------------------~~~~~-~~~~~~~i~~~~~g~l~v~~-~~~~~i~~~d~-  127 (299)
T 2z2n_A           92 -----------------------------------------YTLPN-PDSAPYGITEGPNGDIWFTE-MNGNRIGRITD-  127 (299)
T ss_dssp             -----------------------------------------EECSS-TTCCEEEEEECTTSCEEEEE-TTTTEEEEECT-
T ss_pred             -----------------------------------------EeCCC-cCCCceeeEECCCCCEEEEe-cCCceEEEECC-
Confidence                                                     00011 23457889999998777666 67889999998 


Q ss_pred             cceeee-eeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeE
Q psy14511        273 EERLIQ-KLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTV  348 (488)
Q Consensus       273 ~~~~~~-~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i  348 (488)
                      +++... ........+..+++  ++++.++...++.|..||. ++.............+..++++++|+++++.. ++.|
T Consensus       128 ~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i  206 (299)
T 2z2n_A          128 DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKI  206 (299)
T ss_dssp             TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEE
T ss_pred             CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceE
Confidence            443332 22334456788888  4667666666789999998 44322111233345678899999988666654 3677


Q ss_pred             EEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCc
Q psy14511        349 KIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADET  428 (488)
Q Consensus       349 ~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~  428 (488)
                      .+||. ++                             .+..+.         +..+...+.+++++++|+++++...++.
T Consensus       207 ~~~~~-~g-----------------------------~~~~~~---------~~~~~~~~~~i~~~~~g~l~v~~~~~~~  247 (299)
T 2z2n_A          207 GRITT-SG-----------------------------EITEFK---------IPTPNARPHAITAGAGIDLWFTEWGANK  247 (299)
T ss_dssp             EEECT-TC-----------------------------CEEEEE---------CSSTTCCEEEEEECSTTCEEEEETTTTE
T ss_pred             EEECC-CC-----------------------------cEEEEE---------CCCCCCCceeEEECCCCCEEEeccCCce
Confidence            77765 22                             011111         1223456889999999997777767889


Q ss_pred             EEEEecCCCCcccc--ccccCCcceEEeecCCCce
Q psy14511        429 ISIWNCFPRDKKRK--ARQVGSGSSLEFAILKQPV  461 (488)
Q Consensus       429 v~iw~~~~~~~~~~--~~~~~~v~~~~~s~~~~~~  461 (488)
                      |..||. +++....  ......+.++++ +++..+
T Consensus       248 i~~~d~-~g~~~~~~~~~~~~~~~~i~~-~~g~l~  280 (299)
T 2z2n_A          248 IGRLTS-NNIIEEYPIQIKSAEPHGICF-DGETIW  280 (299)
T ss_dssp             EEEEET-TTEEEEEECSSSSCCEEEEEE-CSSCEE
T ss_pred             EEEECC-CCceEEEeCCCCCCccceEEe-cCCCEE
Confidence            999998 3433221  233456778888 766554

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.59  E-value=1.3e-12  Score=112.52  Aligned_cols=217  Identities=12%  Similarity=0.024  Sum_probs=144.5

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccceeecccC-ceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCccccccc-cc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITREG-DVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCH-LS   81 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~-~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h-~~   81 (488)
                      .+++|++++.++.|.+||.++++.+ ..+..+. ..+.+++++|+|++|+ +.++.|..||. +++....   +..+ ..
T Consensus         4 ~~~~lv~~~~~~~v~~~d~~tG~~~-w~~~~~~~~~~~~~~~~pdG~ilv-s~~~~V~~~d~-~G~~~W~---~~~~~~~   77 (276)
T 3no2_A            4 PQHLLVGGSGWNKIAIINKDTKEIV-WEYPLEKGWECNSVAATKAGEILF-SYSKGAKMITR-DGRELWN---IAAPAGC   77 (276)
T ss_dssp             CCEEEEECTTCSEEEEEETTTTEEE-EEEECCTTCCCCEEEECTTSCEEE-ECBSEEEEECT-TSCEEEE---EECCTTC
T ss_pred             CCcEEEeeCCCCEEEEEECCCCeEE-EEeCCCccCCCcCeEECCCCCEEE-eCCCCEEEECC-CCCEEEE---EcCCCCc
Confidence            5789999999999999999898865 4444444 4688999999999999 44788999998 5543332   3322 34


Q ss_pred             ceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecc
Q psy14511         82 AVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQ  161 (488)
Q Consensus        82 ~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (488)
                      .+.++.+.++|+.+++.+..  ++.+..+|. +|+.+..+...........                             
T Consensus        78 ~~~~~~~~~dG~~lv~~~~~--~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~-----------------------------  125 (276)
T 3no2_A           78 EMQTARILPDGNALVAWCGH--PSTILEVNM-KGEVLSKTEFETGIERPHA-----------------------------  125 (276)
T ss_dssp             EEEEEEECTTSCEEEEEEST--TEEEEEECT-TSCEEEEEEECCSCSSGGG-----------------------------
T ss_pred             cccccEECCCCCEEEEecCC--CCEEEEEeC-CCCEEEEEeccCCCCcccc-----------------------------
Confidence            68889999999887776542  567777775 6776665543211000000                             


Q ss_pred             ccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCC
Q psy14511        162 SKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDN  241 (488)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~  241 (488)
                                                          .........+++.+++...++.|..||.+ ++.+..+...    
T Consensus       126 ------------------------------------~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~----  164 (276)
T 3no2_A          126 ------------------------------------QFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLS----  164 (276)
T ss_dssp             ------------------------------------SCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECS----
T ss_pred             ------------------------------------cccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECC----
Confidence                                                00000011122344555578999999998 8877766643    


Q ss_pred             CceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccc------cEEEEEe--cCCEEEEe
Q psy14511        242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMH------QVIAMCW--NGNLLSCG  300 (488)
Q Consensus       242 ~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~------~v~~~~~--~~~~l~~~  300 (488)
                      ..+.++...++++.++++ ..++.|..+|..+++.+.++..+..      .+..+..  +|+.+++.
T Consensus       165 ~~~~~~~~~~~g~~~v~~-~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~  230 (276)
T 3no2_A          165 GTPFSSAFLDNGDCLVAC-GDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICN  230 (276)
T ss_dssp             SCCCEEEECTTSCEEEEC-BTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred             CCccceeEcCCCCEEEEe-CCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEe
Confidence            345567888999888887 7788999999998999888864321      1444444  45555554

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.58  E-value=1.8e-12  Score=111.61  Aligned_cols=206  Identities=10%  Similarity=0.013  Sum_probs=151.7

Q ss_pred             CCcEE-EEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecccc-c
Q psy14511        208 YHDTL-AVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHM-H  285 (488)
Q Consensus       208 ~~~~~-~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~-~  285 (488)
                      +++++ +++.++.|++||.++++.+..+...  ....+.+++++|+|+.++ +  .++.|..||. +++.+..+..+. .
T Consensus         4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~--~~~~~~~~~~~pdG~ilv-s--~~~~V~~~d~-~G~~~W~~~~~~~~   77 (276)
T 3no2_A            4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLE--KGWECNSVAATKAGEILF-S--YSKGAKMITR-DGRELWNIAAPAGC   77 (276)
T ss_dssp             CCEEEEECTTCSEEEEEETTTTEEEEEEECC--TTCCCCEEEECTTSCEEE-E--CBSEEEEECT-TSCEEEEEECCTTC
T ss_pred             CCcEEEeeCCCCEEEEEECCCCeEEEEeCCC--ccCCCcCeEECCCCCEEE-e--CCCCEEEECC-CCCEEEEEcCCCCc
Confidence            34444 4458999999999999987776642  114688999999998877 4  3678999998 788888887643 4


Q ss_pred             cEEEEEe--cCCEEEEeec-CCeEEEEECcCCCccceeee------cCCccEEEEEEccCCcEEEEEe-cCeEEEEECCC
Q psy14511        286 QVIAMCW--NGNLLSCGTI-GGNILHYDVRTHSDYPTAIT------REGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQ  355 (488)
Q Consensus       286 ~v~~~~~--~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~------~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~  355 (488)
                      .+.++.+  +|+.+++.+. ++.+..+|.. ++ .+..+.      .+......+++.++|+++++.. ++.|..||.+ 
T Consensus        78 ~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~-Gk-~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-  154 (276)
T 3no2_A           78 EMQTARILPDGNALVAWCGHPSTILEVNMK-GE-VLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-  154 (276)
T ss_dssp             EEEEEEECTTSCEEEEEESTTEEEEEECTT-SC-EEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-
T ss_pred             cccccEECCCCCEEEEecCCCCEEEEEeCC-CC-EEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-
Confidence            6666666  7899998877 7778777763 32 322222      1112345567899999999888 4999999988 


Q ss_pred             CCCCcccce----eeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeecc------ccEEEEEEcCCCCEEEEEe
Q psy14511        356 LDAKRPLGL----IVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQ------ERILSAVLSPDQTCVAAAS  424 (488)
Q Consensus       356 ~~~~~~~~~----~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~------~~v~~~~~s~~~~~l~t~~  424 (488)
                      ++....+..    ......++|+.+++  +..++.|..+|..+|+.+.++..+.      ..+..++..++|..+++..
T Consensus       155 G~~~w~~~~~~~~~~~~~~~~g~~~v~--~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~  231 (276)
T 3no2_A          155 GQLLNSVKLSGTPFSSAFLDNGDCLVA--CGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW  231 (276)
T ss_dssp             SCEEEEEECSSCCCEEEECTTSCEEEE--CBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred             CCEEEEEECCCCccceeEcCCCCEEEE--eCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence            755433322    12367789999988  6677899999999999999887543      2378899999999888874

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.58  E-value=1.1e-12  Score=113.35  Aligned_cols=230  Identities=10%  Similarity=-0.026  Sum_probs=148.5

Q ss_pred             cCCceEE-EeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCccccccccc
Q psy14511          3 WNGNLLS-CGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLS   81 (488)
Q Consensus         3 ~dg~~la-~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~   81 (488)
                      .+|++++ +...++.|.+||..+.... .....+...+.+++++++|+++++..++.|.+||..+.... .+  ......
T Consensus        33 ~~g~l~v~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~-~~--~~~~~~  108 (270)
T 1rwi_B           33 SAGNVYVTSEGMYGRVVKLATGSTGTT-VLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQT-VL--PFDGLN  108 (270)
T ss_dssp             TTCCEEEEECSSSCEEEEECC-----E-ECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCE-EC--CCCSCS
T ss_pred             CCCCEEEEccCCCCcEEEecCCCcccc-eEeeCCcCCcceeEECCCCCEEEEcCCCEEEEEeCCCceEe-ee--ecCCcC
Confidence            3788777 5567889999997665422 22223335678899999999766655889999998753211 11  112235


Q ss_pred             ceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecc
Q psy14511         82 AVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQ  161 (488)
Q Consensus        82 ~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (488)
                      .+..+++.++++.+++...   ++.|.+|+..+......                                         
T Consensus       109 ~p~~i~~~~~g~l~v~~~~---~~~i~~~~~~~~~~~~~-----------------------------------------  144 (270)
T 1rwi_B          109 YPEGLAVDTQGAVYVADRG---NNRVVKLAAGSKTQTVL-----------------------------------------  144 (270)
T ss_dssp             SEEEEEECTTCCEEEEEGG---GTEEEEECTTCCSCEEC-----------------------------------------
T ss_pred             CCcceEECCCCCEEEEECC---CCEEEEEECCCceeEee-----------------------------------------
Confidence            6889999999874444333   77888886433221000                                         


Q ss_pred             ccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCC
Q psy14511        162 SKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDN  241 (488)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~  241 (488)
                                                                                               . .. ..
T Consensus       145 -------------------------------------------------------------------------~-~~-~~  149 (270)
T 1rwi_B          145 -------------------------------------------------------------------------P-FT-GL  149 (270)
T ss_dssp             -------------------------------------------------------------------------C-CC-SC
T ss_pred             -------------------------------------------------------------------------c-cc-cC
Confidence                                                                                     0 00 22


Q ss_pred             CceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccce
Q psy14511        242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPT  319 (488)
Q Consensus       242 ~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~  319 (488)
                      ..+.+++++++++.+++. ..++.|.+||............+...+..+++  +|+++++...++.|.+||..... ...
T Consensus       150 ~~p~~i~~~~~g~l~v~~-~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~-~~~  227 (270)
T 1rwi_B          150 NDPDGVAVDNSGNVYVTD-TDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT-STV  227 (270)
T ss_dssp             CSCCCEEECTTCCEEEEE-GGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSC-CEE
T ss_pred             CCceeEEEeCCCCEEEEE-CCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCc-cee
Confidence            245678899999855555 66789999998876544433333356778888  46666666678899999987532 222


Q ss_pred             eeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCC
Q psy14511        320 AITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLD  357 (488)
Q Consensus       320 ~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~  357 (488)
                      ....+...+.+++++|+|+++++.. ++.|+++++...+
T Consensus       228 ~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~  266 (270)
T 1rwi_B          228 LPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH  266 (270)
T ss_dssp             CCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred             eccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence            2222335688999999998777766 5999999987653

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.58  E-value=1.6e-12  Score=112.35  Aligned_cols=233  Identities=9%  Similarity=-0.005  Sum_probs=152.9

Q ss_pred             eeeeeeeCC-CcEEE-E-ECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCccee
Q psy14511        200 YTSGLDWGY-HDTLA-V-ALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERL  276 (488)
Q Consensus       200 ~~~~~~~~~-~~~~~-~-~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~  276 (488)
                      ....+.+++ +.+++ + ..++.|.+|+..+..... ... . ....+.+++++++++.+++. . ++.|..||......
T Consensus        25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~-~~~-~-~~~~p~~i~~~~~g~l~v~~-~-~~~i~~~d~~~~~~   99 (270)
T 1rwi_B           25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTV-LPF-N-GLYQPQGLAVDGAGTVYVTD-F-NNRVVTLAAGSNNQ   99 (270)
T ss_dssp             CEEEEEECTTCCEEEEECSSSCEEEEECC-----EE-CCC-C-SCCSCCCEEECTTCCEEEEE-T-TTEEEEECTTCSCC
T ss_pred             CccceEECCCCCEEEEccCCCCcEEEecCCCcccce-Eee-C-CcCCcceeEECCCCCEEEEc-C-CCEEEEEeCCCceE
Confidence            344455543 45666 5 477899999976654322 111 1 33567889999999855555 5 88999999876543


Q ss_pred             eeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEEC
Q psy14511        277 IQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDF  353 (488)
Q Consensus       277 ~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~  353 (488)
                      ..........+..+++  +++++++...++.|.+|+..+... ..........+..++++|+|+++++.. ++.|.+||.
T Consensus       100 ~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~-~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~  178 (270)
T 1rwi_B          100 TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ-TVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEA  178 (270)
T ss_dssp             EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSC-EECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECT
T ss_pred             eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCcee-EeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEec
Confidence            3222223356778888  577777777788999997654321 111222233567899999999777666 489999998


Q ss_pred             CCCCCCccc----cee-eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCc
Q psy14511        354 RQLDAKRPL----GLI-VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADET  428 (488)
Q Consensus       354 ~~~~~~~~~----~~~-~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~  428 (488)
                      .........    ... ..+++++|..+++  ...++.|.+|+............+...+.+++++|+|+++++...++.
T Consensus       179 ~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~--~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~  256 (270)
T 1rwi_B          179 ESNNQVVLPFTDITAPWGIAVDEAGTVYVT--EHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDR  256 (270)
T ss_dssp             TTCCEEECCCSSCCSEEEEEECTTCCEEEE--ETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTE
T ss_pred             CCCceEeecccCCCCceEEEECCCCCEEEE--ECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCE
Confidence            765432111    111 1278899976666  456789999998765443322233356899999999998889899999


Q ss_pred             EEEEecCCCCcc
Q psy14511        429 ISIWNCFPRDKK  440 (488)
Q Consensus       429 v~iw~~~~~~~~  440 (488)
                      |+++++...+..
T Consensus       257 v~~~~~~~~~~~  268 (270)
T 1rwi_B          257 VVKLTSLEHHHH  268 (270)
T ss_dssp             EEEECCCGGGSC
T ss_pred             EEEEcCCCcccc
Confidence            999999876653

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.57  E-value=2.1e-11  Score=107.04  Aligned_cols=264  Identities=11%  Similarity=0.011  Sum_probs=166.2

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSA   82 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~   82 (488)
                      +|+++++...++.|.+||.. ++.....+..+...+.+++++++|++.++.. ++.|..+|.. ++.. . .........
T Consensus        30 ~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~-~-~~~~~~~~~  105 (300)
T 2qc5_A           30 DGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFT-E-YPLPQPDSG  105 (300)
T ss_dssp             TSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-E-EECSSTTCC
T ss_pred             CCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeE-E-ecCCCCCCC
Confidence            68877777678999999987 4422222333446789999999999887776 7899999976 3321 1 112223356


Q ss_pred             eeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccc
Q psy14511         83 VKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQS  162 (488)
Q Consensus        83 v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (488)
                      +..+++.++++.+++...   ++.|..++.. ++...                                           
T Consensus       106 ~~~i~~~~~g~l~v~~~~---~~~i~~~~~~-g~~~~-------------------------------------------  138 (300)
T 2qc5_A          106 PYGITEGLNGDIWFTQLN---GDRIGKLTAD-GTIYE-------------------------------------------  138 (300)
T ss_dssp             EEEEEECSTTCEEEEETT---TTEEEEECTT-SCEEE-------------------------------------------
T ss_pred             CccceECCCCCEEEEccC---CCeEEEECCC-CCEEE-------------------------------------------
Confidence            889999998865544433   6778888765 43210                                           


Q ss_pred             cccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCC
Q psy14511        163 KRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNA  242 (488)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~  242 (488)
                                                                                             +..+. ...
T Consensus       139 -----------------------------------------------------------------------~~~~~-~~~  146 (300)
T 2qc5_A          139 -----------------------------------------------------------------------YDLPN-KGS  146 (300)
T ss_dssp             -----------------------------------------------------------------------EECSS-TTC
T ss_pred             -----------------------------------------------------------------------ccCCC-CCC
Confidence                                                                                   00111 234


Q ss_pred             ceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeee-eeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccce
Q psy14511        243 YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQ-KLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPT  319 (488)
Q Consensus       243 ~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~-~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~  319 (488)
                      .+..+++.++++..++. ..++.|..+|. +++... ....+...+..+.+  ++++.++....+.|.+||. ++.....
T Consensus       147 ~~~~i~~d~~g~l~v~~-~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~  223 (300)
T 2qc5_A          147 YPAFITLGSDNALWFTE-NQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEY  223 (300)
T ss_dssp             CEEEEEECTTSSEEEEE-TTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEE
T ss_pred             CceeEEECCCCCEEEEe-cCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEE
Confidence            57789999999855555 66788999988 444332 22233456778888  4666666666778999998 3322222


Q ss_pred             eeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCccee
Q psy14511        320 AITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLI  398 (488)
Q Consensus       320 ~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~  398 (488)
                      ....+...+.+++++++|++.++.. ++.|..||.. +                             .+..+.+      
T Consensus       224 ~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g-----------------------------~~~~~~~------  267 (300)
T 2qc5_A          224 DIPTPNARPHAITAGKNSEIWFTEWGANQIGRITND-N-----------------------------TIQEYQL------  267 (300)
T ss_dssp             ECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-S-----------------------------CEEEEEC------
T ss_pred             ECCCCCCCceEEEECCCCCEEEeccCCCeEEEECCC-C-----------------------------cEEEEEC------
Confidence            2233445678899999988666554 3777777652 1                             1222221      


Q ss_pred             EEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEec
Q psy14511        399 EELKIHQERILSAVLSPDQTCVAAASADETISIWNC  434 (488)
Q Consensus       399 ~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~  434 (488)
                         ......+.++++.++|+++++.. . .|..++.
T Consensus       268 ---~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p  298 (300)
T 2qc5_A          268 ---QTENAEPHGITFGKDGSVWFALK-C-KIGKLNL  298 (300)
T ss_dssp             ---CSTTCCCCCEEECTTSCEEEECS-S-EEEEEEE
T ss_pred             ---CccCCccceeEeCCCCCEEEEcc-C-ceEEeCC
Confidence               11234578899999998666554 4 6666664

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.56  E-value=1.9e-12  Score=128.57  Aligned_cols=181  Identities=13%  Similarity=0.020  Sum_probs=112.3

Q ss_pred             EEEEEcCCCCeEEEEeCCCC--------------cEEEEECCcce----eeeeeccccccEEEEEe--cCCEEEEeecCC
Q psy14511        245 SCVAWKPRTTDLAVTNTCTE--------------YIDLWHEQEER----LIQKLRTHMHQVIAMCW--NGNLLSCGTIGG  304 (488)
Q Consensus       245 ~~~~~~~~~~~l~~~~~~~~--------------~i~i~d~~~~~----~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg  304 (488)
                      ..++|+|| +.|+.+ ..++              .|++|++.++.    .+.....+...+..+.|  ||++|+..+.++
T Consensus       212 ~~~~wspD-~~l~~~-~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~  289 (741)
T 1yr2_A          212 SGLAWLGN-DALLYS-RFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEG  289 (741)
T ss_dssp             CCCEESTT-SEEEEE-ECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECT
T ss_pred             ccEEEECC-CEEEEE-EecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEcc
Confidence            35678888 888877 4433              38899987654    22222233334677777  788888877544


Q ss_pred             -----eEEEEECcCCCcc-ceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEE
Q psy14511        305 -----NILHYDVRTHSDY-PTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVT  378 (488)
Q Consensus       305 -----~i~i~d~~~~~~~-~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~  378 (488)
                           .|++||+.++... ...+..+...+... ++|+|+.|+..++.                                
T Consensus       290 ~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~--------------------------------  336 (741)
T 1yr2_A          290 TDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGD--------------------------------  336 (741)
T ss_dssp             TCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECT--------------------------------
T ss_pred             CCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECC--------------------------------
Confidence                 8999999875222 44555554444444 34788877766531                                


Q ss_pred             EccCCCCeEEEEeCCCc--ceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecC-CCCcccccc--ccCCcceEE
Q psy14511        379 SHGKQDCSLKMWEYPRL--HLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCF-PRDKKRKAR--QVGSGSSLE  453 (488)
Q Consensus       379 ~~g~~~~~i~i~d~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~-~~~~~~~~~--~~~~v~~~~  453 (488)
                        +..++.|.+||+.++  +....+..+...+..++|+ ++.++++...|+..+||.+. +++......  ..+.+..+.
T Consensus       337 --~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~  413 (741)
T 1yr2_A          337 --GAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLS  413 (741)
T ss_dssp             --TCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEE
T ss_pred             --CCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEee
Confidence              122445666666553  2233334445567778887 66788888899988777665 343332222  356678889


Q ss_pred             eecCCCceEE
Q psy14511        454 FAILKQPVSL  463 (488)
Q Consensus       454 ~s~~~~~~~~  463 (488)
                      ++|++..+.+
T Consensus       414 ~s~d~~~l~~  423 (741)
T 1yr2_A          414 GRPGDRHAYL  423 (741)
T ss_dssp             CCBTCSCEEE
T ss_pred             cCCCCCEEEE
Confidence            9999877654

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.54  E-value=1.3e-11  Score=109.20  Aligned_cols=245  Identities=12%  Similarity=0.123  Sum_probs=150.7

Q ss_pred             CCceEEE-------eecCCeEEEEEcccCcccceee---cccCceEEEEEEccC-CcEEEEecCCeEEEEeccccCcCCC
Q psy14511          4 NGNLLSC-------GTIGGNILHYDVRTHSDYPTAI---TREGDVVCGLKWSPN-GRYLASGSNNTVKIWDFRQLDAKRP   72 (488)
Q Consensus         4 dg~~la~-------g~~dg~i~iwd~~~~~~~~~~~---~~h~~~V~~l~~sp~-g~~las~~d~~i~vwd~~~~~~~~~   72 (488)
                      +|+++++       +..++.|.+||..+++......   .++...+.+++++++ |+++++...+.|.+||.+ ++....
T Consensus        28 ~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~~~d~~-g~~~~~  106 (314)
T 1pjx_A           28 NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQTD-GTFEEI  106 (314)
T ss_dssp             TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEETT-SCEEEC
T ss_pred             CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCEEEEeCC-CCEEEE
Confidence            6777777       6778999999987776321111   125567899999999 887776665578999987 443221


Q ss_pred             -cccccc-cccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEee
Q psy14511         73 -QVNNQC-HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHG  150 (488)
Q Consensus        73 -~~~~~~-h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (488)
                       .....+ ....+.++++.++|+.+++...   ++..    ....      ....                         
T Consensus       107 ~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~---~~~~----~~~~------~~~~-------------------------  148 (314)
T 1pjx_A          107 AKKDSEGRRMQGCNDCAFDYEGNLWITAPA---GEVA----PADY------TRSM-------------------------  148 (314)
T ss_dssp             CSBCTTSCBCBCCCEEEECTTSCEEEEECB---CBCT----TSCC------CBTT-------------------------
T ss_pred             EeccCCCccccCCcCEEECCCCCEEEEecC---cccc----cccc------cccc-------------------------
Confidence             111111 2245889999999865544432   3110    0000      0000                         


Q ss_pred             eeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCce
Q psy14511        151 FEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKT  230 (488)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~  230 (488)
                                                                                     ....+.|..|+.. ++.
T Consensus       149 ---------------------------------------------------------------~~~~~~l~~~~~~-g~~  164 (314)
T 1pjx_A          149 ---------------------------------------------------------------QEKFGSIYCFTTD-GQM  164 (314)
T ss_dssp             ---------------------------------------------------------------SSSCEEEEEECTT-SCE
T ss_pred             ---------------------------------------------------------------cCCCCeEEEECCC-CCE
Confidence                                                                           0001223333333 222


Q ss_pred             EEEEecCCCCCCceEEEEEc----CCCCeEEEEeCCCCcEEEEECC-cce-----eeeeecccc-ccEEEEEe--cCCEE
Q psy14511        231 QLLVEYPTYDNAYISCVAWK----PRTTDLAVTNTCTEYIDLWHEQ-EER-----LIQKLRTHM-HQVIAMCW--NGNLL  297 (488)
Q Consensus       231 ~~~~~~~~~~~~~i~~~~~~----~~~~~l~~~~~~~~~i~i~d~~-~~~-----~~~~~~~~~-~~v~~~~~--~~~~l  297 (488)
                      .....    .......++++    |+++.++++...++.|.+||.. .++     ....+..+. .....+++  +|+++
T Consensus       165 ~~~~~----~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~  240 (314)
T 1pjx_A          165 IQVDT----AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLL  240 (314)
T ss_dssp             EEEEE----EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEE
T ss_pred             EEecc----CCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEE
Confidence            22211    22245788999    9997776664678899999976 333     222333333 55677887  57777


Q ss_pred             EEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-c-CeEEEEECCCC
Q psy14511        298 SCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-N-NTVKIWDFRQL  356 (488)
Q Consensus       298 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d-~~i~iwd~~~~  356 (488)
                      ++...++.|.+||..+++ ....+..+...+.+++|+|+++.|..++ . +.|..|++...
T Consensus       241 v~~~~~~~i~~~d~~~g~-~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~  300 (314)
T 1pjx_A          241 VANWGSSHIEVFGPDGGQ-PKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN  300 (314)
T ss_dssp             EEEETTTEEEEECTTCBS-CSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred             EEEcCCCEEEEEcCCCCc-EeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence            777788999999987543 4445555656789999999999666555 3 79999998753

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.51  E-value=2.5e-10  Score=100.13  Aligned_cols=262  Identities=8%  Similarity=-0.012  Sum_probs=167.9

Q ss_pred             cCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecC
Q psy14511         35 EGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSM  113 (488)
Q Consensus        35 h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~  113 (488)
                      ....+.+++++++|++.++.. ++.|.+||.. ++... + .+..+...+..+++.+++..+++...   ++.|..+|..
T Consensus        18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~-~-~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~v~~~d~~   91 (300)
T 2qc5_A           18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKE-F-EVPTPDAKVMCLIVSSLGDIWFTENG---ANKIGKLSKK   91 (300)
T ss_dssp             TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE-E-ECSSTTCCEEEEEECTTSCEEEEETT---TTEEEEECTT
T ss_pred             CCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEE-E-ECCCCCCcceeEEECCCCCEEEEecC---CCeEEEECCC
Confidence            345688999999999888775 8999999976 33221 1 12233467889999998865444433   6778888865


Q ss_pred             CCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCC
Q psy14511        114 NGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAP  193 (488)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (488)
                       ++.. .                                                                         
T Consensus        92 -g~~~-~-------------------------------------------------------------------------   96 (300)
T 2qc5_A           92 -GGFT-E-------------------------------------------------------------------------   96 (300)
T ss_dssp             -SCEE-E-------------------------------------------------------------------------
T ss_pred             -CCeE-E-------------------------------------------------------------------------
Confidence             4321 0                                                                         


Q ss_pred             CccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCc
Q psy14511        194 SIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE  273 (488)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~  273 (488)
                                                              +..+. ....+.++++.++++..++. ..++.|..+|.. 
T Consensus        97 ----------------------------------------~~~~~-~~~~~~~i~~~~~g~l~v~~-~~~~~i~~~~~~-  133 (300)
T 2qc5_A           97 ----------------------------------------YPLPQ-PDSGPYGITEGLNGDIWFTQ-LNGDRIGKLTAD-  133 (300)
T ss_dssp             ----------------------------------------EECSS-TTCCEEEEEECSTTCEEEEE-TTTTEEEEECTT-
T ss_pred             ----------------------------------------ecCCC-CCCCCccceECCCCCEEEEc-cCCCeEEEECCC-
Confidence                                                    01111 22457788999988776666 668889999987 


Q ss_pred             ceeee-eeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEec-CeEE
Q psy14511        274 ERLIQ-KLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN-NTVK  349 (488)
Q Consensus       274 ~~~~~-~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d-~~i~  349 (488)
                      ++... .+......+..+.+  ++++.++...++.|..+|. ++.........+...+..++++++|++.++... +.|.
T Consensus       134 g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~  212 (300)
T 2qc5_A          134 GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIG  212 (300)
T ss_dssp             SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEE
T ss_pred             CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEE
Confidence            44432 23333456778888  5676666666788999998 333222222233456788999998877666553 6677


Q ss_pred             EEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcE
Q psy14511        350 IWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETI  429 (488)
Q Consensus       350 iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v  429 (488)
                      +||.. +                             .+..+.         +..+...+.+++++++|+++++...++.|
T Consensus       213 ~~~~~-g-----------------------------~~~~~~---------~~~~~~~~~~i~~d~~g~l~v~~~~~~~i  253 (300)
T 2qc5_A          213 RITTT-G-----------------------------EISEYD---------IPTPNARPHAITAGKNSEIWFTEWGANQI  253 (300)
T ss_dssp             EECTT-C-----------------------------CEEEEE---------CSSTTCCEEEEEECSTTCEEEEETTTTEE
T ss_pred             EEcCC-C-----------------------------cEEEEE---------CCCCCCCceEEEECCCCCEEEeccCCCeE
Confidence            77652 1                             111111         11234567899999999977777677899


Q ss_pred             EEEecCCCCcccc--ccccCCcceEEeecCCCce
Q psy14511        430 SIWNCFPRDKKRK--ARQVGSGSSLEFAILKQPV  461 (488)
Q Consensus       430 ~iw~~~~~~~~~~--~~~~~~v~~~~~s~~~~~~  461 (488)
                      ..|+. +++....  ......+.++++.+++..+
T Consensus       254 ~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~  286 (300)
T 2qc5_A          254 GRITN-DNTIQEYQLQTENAEPHGITFGKDGSVW  286 (300)
T ss_dssp             EEECT-TSCEEEEECCSTTCCCCCEEECTTSCEE
T ss_pred             EEECC-CCcEEEEECCccCCccceeEeCCCCCEE
Confidence            99998 3443321  2234567888888887643

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=99.51  E-value=2e-11  Score=110.24  Aligned_cols=271  Identities=8%  Similarity=0.004  Sum_probs=166.6

Q ss_pred             cCCcEEEEec--C----CeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCC-------cccceEEEEec
Q psy14511         46 PNGRYLASGS--N----NTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGG-------ICDQTVRLWNS  112 (488)
Q Consensus        46 p~g~~las~~--d----~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~-------~~d~~i~vwd~  112 (488)
                      |+++.+....  +    +.|.+.|..+.+....+   ..-..+  .+.++||+++++++...       ..++.|.++|.
T Consensus        82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I---~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~  156 (426)
T 3c75_H           82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMT---DGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDP  156 (426)
T ss_dssp             CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEE---EECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred             CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEE---ECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEEC
Confidence            4677665554  3    79999999885544333   222234  89999999998887620       01678999999


Q ss_pred             CCCeeeeeeecCCC-------ccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCC
Q psy14511        113 MNGKEKCHVKTDSQ-------QANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAK  185 (488)
Q Consensus       113 ~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (488)
                      .+++.+..+.....       ....+.                                                     
T Consensus       157 ~t~~vv~~I~v~g~~r~~~g~~P~~~~-----------------------------------------------------  183 (426)
T 3c75_H          157 VTFLPIADIELPDAPRFLVGTYQWMNA-----------------------------------------------------  183 (426)
T ss_dssp             TTCCEEEEEEETTCCCCCBSCCGGGSE-----------------------------------------------------
T ss_pred             CCCcEEEEEECCCccccccCCCcceEE-----------------------------------------------------
Confidence            99988777654310       000111                                                     


Q ss_pred             CceeecCCCccccceeeeeeeCCCcEEEEEC--CCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCC-CeEEEEeCC
Q psy14511        186 PERILEAPSIINDFYTSGLDWGYHDTLAVAL--DTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRT-TDLAVTNTC  262 (488)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~~  262 (488)
                                        ++.++..++++..  ++.|.+.|+.+++....+...+       +....|++ +.+++. +.
T Consensus       184 ------------------~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g-------~~~~~p~g~~~~v~~-~~  237 (426)
T 3c75_H          184 ------------------LTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD-------CYHIFPASPTVFYMN-CR  237 (426)
T ss_dssp             ------------------ECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS-------EEEEEEEETTEEEEE-ET
T ss_pred             ------------------EcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC-------ceeeccCCCcEEEEE-cC
Confidence                              1112345666653  6889999999999888777643       12233433 223333 56


Q ss_pred             CCcEEEEECCcceeee----eeccccccE---EEEEecCCEEEEeecCCeEEEEECcCCCcc-ceeee-------c---C
Q psy14511        263 TEYIDLWHEQEERLIQ----KLRTHMHQV---IAMCWNGNLLSCGTIGGNILHYDVRTHSDY-PTAIT-------R---E  324 (488)
Q Consensus       263 ~~~i~i~d~~~~~~~~----~~~~~~~~v---~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~-------~---~  324 (488)
                      ||.+.+.+..+++...    .+.....++   ..+..++..++.....+.+.+.|....... ...+.       .   .
T Consensus       238 dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~  317 (426)
T 3c75_H          238 DGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWR  317 (426)
T ss_dssp             TSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEE
T ss_pred             CCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccc
Confidence            6666666664443331    111111111   112235666666677889999998653211 01110       0   0


Q ss_pred             CccEEEEEEccCCcEEEEEe-----------cCeEEEEECCCCCCCcccceee----eeecCCCC-EEEEEccCCCCeEE
Q psy14511        325 GDVVCGLKWSPNGRYLASGS-----------NNTVKIWDFRQLDAKRPLGLIV----PKLKREGR-ELVTSHGKQDCSLK  388 (488)
Q Consensus       325 ~~~i~~~~~s~~~~~l~~~~-----------d~~i~iwd~~~~~~~~~~~~~~----~~~~~~~~-~l~~~~g~~~~~i~  388 (488)
                      ......++++|+++.+++..           .+.|.++|..+.+....+....    ..|+|||+ .++++ ...++.|.
T Consensus       318 p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~spDg~~~lyv~-n~~s~~Vs  396 (426)
T 3c75_H          318 PGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHEIDSINVSQDAEPLLYAL-SAGTQTLH  396 (426)
T ss_dssp             ECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEE-ETTTTEEE
T ss_pred             cCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEEccCCCEEEEEE-cCCCCeEE
Confidence            01112368999988777654           2479999999987666554332    29999999 77774 44689999


Q ss_pred             EEeCCCcceeEEE
Q psy14511        389 MWEYPRLHLIEEL  401 (488)
Q Consensus       389 i~d~~~~~~~~~~  401 (488)
                      ++|+.+++.+.++
T Consensus       397 VID~~t~kvv~tI  409 (426)
T 3c75_H          397 IYDAATGEELRSV  409 (426)
T ss_dssp             EEETTTCCEEEEE
T ss_pred             EEECCCCCEEEEe
Confidence            9999999999887

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.50  E-value=3.4e-11  Score=106.56  Aligned_cols=153  Identities=9%  Similarity=0.068  Sum_probs=91.9

Q ss_pred             ceEEEEEcCCCCeEEEEeCCC---------------CcEEEEECCcceeeeeeccccccEEEEEec------CCEEEEe-
Q psy14511        243 YISCVAWKPRTTDLAVTNTCT---------------EYIDLWHEQEERLIQKLRTHMHQVIAMCWN------GNLLSCG-  300 (488)
Q Consensus       243 ~i~~~~~~~~~~~l~~~~~~~---------------~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~------~~~l~~~-  300 (488)
                      .+.+++++++|+..++. ..+               +.|..++.. ++..... .+......++++      ++.++.+ 
T Consensus       118 ~~~~i~~d~~g~l~v~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~-~~~~~~~~i~~~~~~d~dg~~l~v~~  194 (314)
T 1pjx_A          118 GCNDCAFDYEGNLWITA-PAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD-TAFQFPNGIAVRHMNDGRPYQLIVAE  194 (314)
T ss_dssp             CCCEEEECTTSCEEEEE-CBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE-EEESSEEEEEEEECTTSCEEEEEEEE
T ss_pred             CCcCEEECCCCCEEEEe-cCcccccccccccccCCCCeEEEECCC-CCEEEec-cCCCCcceEEEecccCCCCCEEEEEE
Confidence            46678888888766655 443               567777765 4333222 222234455554      4455444 


Q ss_pred             ecCCeEEEEECcCCCc-----cceeeecCC-ccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCC
Q psy14511        301 TIGGNILHYDVRTHSD-----YPTAITREG-DVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREG  373 (488)
Q Consensus       301 ~~dg~i~i~d~~~~~~-----~~~~~~~~~-~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~  373 (488)
                      ..++.|.+||......     ....+..+. ..+..++++++|+++++.. ++.|.+||.                    
T Consensus       195 ~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~--------------------  254 (314)
T 1pjx_A          195 TPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGP--------------------  254 (314)
T ss_dssp             TTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECT--------------------
T ss_pred             CCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcC--------------------
Confidence            5678999999762111     111222232 4567788888887666554 355555554                    


Q ss_pred             CEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEE-EEEeCCCcEEEEecCCC
Q psy14511        374 RELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCV-AAASADETISIWNCFPR  437 (488)
Q Consensus       374 ~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~t~~~dg~v~iw~~~~~  437 (488)
                                         .+++.+..+..+...+.+++|+|+++.| ++...++.|..|++...
T Consensus       255 -------------------~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~  300 (314)
T 1pjx_A          255 -------------------DGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN  300 (314)
T ss_dssp             -------------------TCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred             -------------------CCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence                               3344444444555678999999999955 45556688999998753

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=99.47  E-value=1.8e-11  Score=108.82  Aligned_cols=229  Identities=9%  Similarity=-0.031  Sum_probs=150.2

Q ss_pred             CCeEEEEECCCCceEEEEecCCCC----CCceEEEEEcCCCCeEEEEeCC-CCcEEE--EECCcceeeeeeccccccEEE
Q psy14511        217 DTSVYTWNTKTNKTQLLVEYPTYD----NAYISCVAWKPRTTDLAVTNTC-TEYIDL--WHEQEERLIQKLRTHMHQVIA  289 (488)
Q Consensus       217 d~~v~iw~~~~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~~~-~~~i~i--~d~~~~~~~~~~~~~~~~v~~  289 (488)
                      ++.|.+||+.+++....+..++..    ......++++|||++++++... +..+.+  +|..+   +..+... +. ..
T Consensus        95 ~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~-~~-~~  169 (368)
T 1mda_H           95 TDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSA-SC-FH  169 (368)
T ss_dssp             EEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECS-SC-CC
T ss_pred             CCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECC-Cc-eE
Confidence            688999999999998888764201    1245679999999999998333 456888  88877   3344221 11 12


Q ss_pred             EEec-CCEEEEeecCCeEEEEECcC----CCccce----eeecCCccEEEEEEccCCc-EEEEEecCeEEEEECCCCCC-
Q psy14511        290 MCWN-GNLLSCGTIGGNILHYDVRT----HSDYPT----AITREGDVVCGLKWSPNGR-YLASGSNNTVKIWDFRQLDA-  358 (488)
Q Consensus       290 ~~~~-~~~l~~~~~dg~i~i~d~~~----~~~~~~----~~~~~~~~i~~~~~s~~~~-~l~~~~d~~i~iwd~~~~~~-  358 (488)
                      +..+ .+.+++.+.||.+.+.|+.+    ..+...    .+.-...+.   + ++++. ++.+.. +.+.+.|+..... 
T Consensus       170 ~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~  244 (368)
T 1mda_H          170 IHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGAT  244 (368)
T ss_dssp             CEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCE
T ss_pred             EccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcce
Confidence            3333 45566777888888888876    222211    111122333   3 45544 444444 8899999864321 


Q ss_pred             -Ccccce---------------eeeeecCCCCEEEEEcc-C-C-----CCeEEEEeCCCcceeEEEeeccccEEEEEEcC
Q psy14511        359 -KRPLGL---------------IVPKLKREGRELVTSHG-K-Q-----DCSLKMWEYPRLHLIEELKIHQERILSAVLSP  415 (488)
Q Consensus       359 -~~~~~~---------------~~~~~~~~~~~l~~~~g-~-~-----~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~  415 (488)
                       ...+..               ....++|+++.++++.. . .     ++.+.++|+.+.+.+.++.... ....++|+|
T Consensus       245 v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~  323 (368)
T 1mda_H          245 MKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQ  323 (368)
T ss_dssp             EECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECC
T ss_pred             EEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECC
Confidence             111100               01368999999887533 1 1     2356699999999988887554 588999999


Q ss_pred             CCC-EEEEEe-CCCcEEEEecCCCCccccccccCCcceEEeec
Q psy14511        416 DQT-CVAAAS-ADETISIWNCFPRDKKRKARQVGSGSSLEFAI  456 (488)
Q Consensus       416 ~~~-~l~t~~-~dg~v~iw~~~~~~~~~~~~~~~~v~~~~~s~  456 (488)
                      ||+ .+++.. .++.|.++|+.+++......-......+++.+
T Consensus       324 Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~P~~i~~~~  366 (368)
T 1mda_H          324 DGASDNYANSAGTEVLDIYDAASDQDQSSVELDKGPESLSVQN  366 (368)
T ss_dssp             SSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSCCCEEECCC
T ss_pred             CCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCCCCEEEeec
Confidence            998 456666 59999999999999887766666667776654

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=99.46  E-value=2.7e-11  Score=119.14  Aligned_cols=181  Identities=10%  Similarity=0.034  Sum_probs=107.7

Q ss_pred             CeEEEEECCCCce--EEEEecCCCCCCceEEEEEcCCCCeEEEEeCC---CCcEEEEECCcce-eeeeeccccccEEE-E
Q psy14511        218 TSVYTWNTKTNKT--QLLVEYPTYDNAYISCVAWKPRTTDLAVTNTC---TEYIDLWHEQEER-LIQKLRTHMHQVIA-M  290 (488)
Q Consensus       218 ~~v~iw~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~---~~~i~i~d~~~~~-~~~~~~~~~~~v~~-~  290 (488)
                      ..|++|++.++..  ..++.....+......+.|+|||++|+.....   ...|+++|+.++. ....+..+...... +
T Consensus       208 ~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~~  287 (693)
T 3iuj_A          208 HKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSLV  287 (693)
T ss_dssp             CEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEEE
T ss_pred             cEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEEE
Confidence            4566666665543  22222210012346789999999998776332   3589999987753 34444444444333 4


Q ss_pred             EecCCEEEEee-c---CCeEEEEECcCCCc-cceeeecCCccEEEEEEccCCcEEEEEe-c-C--eEEEEECCCCCCCcc
Q psy14511        291 CWNGNLLSCGT-I---GGNILHYDVRTHSD-YPTAITREGDVVCGLKWSPNGRYLASGS-N-N--TVKIWDFRQLDAKRP  361 (488)
Q Consensus       291 ~~~~~~l~~~~-~---dg~i~i~d~~~~~~-~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d-~--~i~iwd~~~~~~~~~  361 (488)
                      ..++..|+..+ .   .+.|..+|+.++.. ....+..+...+.  .|++++++|+... + +  .|++||+.       
T Consensus       288 ~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~-------  358 (693)
T 3iuj_A          288 DNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYE-------  358 (693)
T ss_dssp             EEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTT-------
T ss_pred             eccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECC-------
Confidence            45666555444 3   36799999987542 1244555555554  8899998887765 2 2  45555543       


Q ss_pred             cceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEe-eccccEEEEEEcCCCCEEEEEeCC----CcEEEEecCC
Q psy14511        362 LGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELK-IHQERILSAVLSPDQTCVAAASAD----ETISIWNCFP  436 (488)
Q Consensus       362 ~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~t~~~d----g~v~iw~~~~  436 (488)
                                                      .+ ....+. ...+.+..+.++|+++.|+....+    +.++.||+.+
T Consensus       359 --------------------------------g~-~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~  405 (693)
T 3iuj_A          359 --------------------------------GK-RVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKS  405 (693)
T ss_dssp             --------------------------------SC-EEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTT
T ss_pred             --------------------------------CC-eeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCC
Confidence                                            11 122222 233456777888888877665544    7899999987


Q ss_pred             CCcc
Q psy14511        437 RDKK  440 (488)
Q Consensus       437 ~~~~  440 (488)
                      ++..
T Consensus       406 g~~~  409 (693)
T 3iuj_A          406 GAIS  409 (693)
T ss_dssp             CCEE
T ss_pred             CeEE
Confidence            7654

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=99.43  E-value=1.3e-11  Score=109.78  Aligned_cols=269  Identities=10%  Similarity=-0.024  Sum_probs=157.9

Q ss_pred             eEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-----------CCeEEEEeccccCcCCCccccccc----c
Q psy14511         16 NILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-----------NNTVKIWDFRQLDAKRPQVNNQCH----L   80 (488)
Q Consensus        16 ~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-----------d~~i~vwd~~~~~~~~~~~~~~~h----~   80 (488)
                      .|.++|..+++.+.++-.+.. +  .+.++|||++|..+.           ++.|.+||..+++....+..-.+.    .
T Consensus        47 ~vsvID~~t~~v~~~i~vG~~-P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g  123 (368)
T 1mda_H           47 ENWVSCAGCGVTLGHSLGAFL-S--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVG  123 (368)
T ss_dssp             EEEEEETTTTEEEEEEEECTT-C--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBS
T ss_pred             eEEEEECCCCeEEEEEeCCCC-C--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccC
Confidence            888999999987655444544 5  799999999888774           588999999986654433211000    1


Q ss_pred             cceeEEEEecCCCeEEeeeCCcccceEEE--EecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccce
Q psy14511         81 SAVKAIAWCPWEPTLLATGGGICDQTVRL--WNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKV  158 (488)
Q Consensus        81 ~~v~~l~~~~~~~~l~~~~~~~~d~~i~v--wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (488)
                      .....++|+|||++++++... .+..+.+  +|+.+   +..+...                                  
T Consensus       124 ~~P~~ia~SpDGk~lyVan~~-~~~~v~V~~iD~~t---v~~i~v~----------------------------------  165 (368)
T 1mda_H          124 PRVHIIGNCASSACLLFFLFG-SSAAAGLSVPGASD---DQLTKSA----------------------------------  165 (368)
T ss_dssp             CCTTSEEECTTSSCEEEEECS-SSCEEEEEETTTEE---EEEEECS----------------------------------
T ss_pred             CCcceEEEcCCCCEEEEEccC-CCCeEEEEEEchhh---ceEEECC----------------------------------
Confidence            245689999999998887641 1356777  77754   2222110                                  


Q ss_pred             eccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCC
Q psy14511        159 LNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPT  238 (488)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~  238 (488)
                                                                                                     +
T Consensus       166 -------------------------------------------------------------------------------~  166 (368)
T 1mda_H          166 -------------------------------------------------------------------------------S  166 (368)
T ss_dssp             -------------------------------------------------------------------------------S
T ss_pred             -------------------------------------------------------------------------------C
Confidence                                                                                           0


Q ss_pred             CCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCc-----ceeee----eeccccccEEEEEecCCEEEEeecCCeEEEE
Q psy14511        239 YDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE-----ERLIQ----KLRTHMHQVIAMCWNGNLLSCGTIGGNILHY  309 (488)
Q Consensus       239 ~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~-----~~~~~----~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~  309 (488)
                          .   ..+.|+++..+.+.+.|+.+.+.|+.+     ++...    .+.....+. . ..++..++..+. +.+.+.
T Consensus       167 ----~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~-~-~~~~~~~~~vs~-~~V~vi  236 (368)
T 1mda_H          167 ----C---FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA-Q-ANYPGMLVWAVA-SSILQG  236 (368)
T ss_dssp             ----C---CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE-E-ETTTTEEEECBS-SCCEEE
T ss_pred             ----c---eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc-c-cccCCEEEEEcC-CEEEEE
Confidence                0   001122222222213444444444443     22211    111122233 2 335566555556 889999


Q ss_pred             ECcCCCc-cceeee-------cCC---ccEEEEEEccCCcEEEEEe----------cCeEEEEECCCCCCCcccceeee-
Q psy14511        310 DVRTHSD-YPTAIT-------REG---DVVCGLKWSPNGRYLASGS----------NNTVKIWDFRQLDAKRPLGLIVP-  367 (488)
Q Consensus       310 d~~~~~~-~~~~~~-------~~~---~~i~~~~~s~~~~~l~~~~----------d~~i~iwd~~~~~~~~~~~~~~~-  367 (488)
                      |...... ....+.       .+.   .....++++|+++.+..+.          ++.+.++|+.+.+....+..... 
T Consensus       237 D~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p  316 (368)
T 1mda_H          237 DIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDS  316 (368)
T ss_dssp             ECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEE
T ss_pred             ECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCCc
Confidence            9865321 111111       011   1111268999998877643          22566999999876655543322 


Q ss_pred             ---eecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcC
Q psy14511        368 ---KLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSP  415 (488)
Q Consensus       368 ---~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~  415 (488)
                         .|+|||+.++++....++.|.++|+.+++.+.++..... ...+++.+
T Consensus       317 ~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~-P~~i~~~~  366 (368)
T 1mda_H          317 DAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKG-PESLSVQN  366 (368)
T ss_dssp             CEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSC-CCEEECCC
T ss_pred             ceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCC-CCEEEeec
Confidence               999999976665333589999999999999998875544 34555543

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.43  E-value=3.8e-10  Score=98.69  Aligned_cols=220  Identities=11%  Similarity=0.136  Sum_probs=146.8

Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCcc
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDY  317 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~  317 (488)
                      ......+..|+|++..|+.....++.|..||..+++. ..+ .....+.++.+  +++++++ . ++.|.+||..++. .
T Consensus        11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~-~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~-~   85 (297)
T 3g4e_A           11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRV-TMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQS-A   85 (297)
T ss_dssp             CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEE-ECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTE-E
T ss_pred             CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEE-eCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCc-E
Confidence            3445678899997776666647889999999987654 223 23467888888  5775444 4 5689999987653 2


Q ss_pred             ceeeec----CCccEEEEEEccCCcEEEEEec----------CeEEEEECCCCCCCccc-cee----eeeecCCCCEEEE
Q psy14511        318 PTAITR----EGDVVCGLKWSPNGRYLASGSN----------NTVKIWDFRQLDAKRPL-GLI----VPKLKREGRELVT  378 (488)
Q Consensus       318 ~~~~~~----~~~~i~~~~~s~~~~~l~~~~d----------~~i~iwd~~~~~~~~~~-~~~----~~~~~~~~~~l~~  378 (488)
                      ......    ....++.++++|+|+++++...          ..-.+|.+........+ ...    -.+|+|+++.+++
T Consensus        86 ~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv  165 (297)
T 3g4e_A           86 VVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYY  165 (297)
T ss_dssp             EEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEE
T ss_pred             EEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEE
Confidence            111111    2245789999999997776531          22355555432111111 111    1289999998876


Q ss_pred             EccCCCCeEEEEeC--CCcce-----eEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcccccc-ccCCcc
Q psy14511        379 SHGKQDCSLKMWEY--PRLHL-----IEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKAR-QVGSGS  450 (488)
Q Consensus       379 ~~g~~~~~i~i~d~--~~~~~-----~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~~~-~~~~v~  450 (488)
                      + ...++.|.+|++  .+++.     ...+..+......+++.++|++.++....+.|..||..+++...... ....++
T Consensus       166 ~-~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t  244 (297)
T 3g4e_A          166 I-DSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTT  244 (297)
T ss_dssp             E-EGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEE
T ss_pred             e-cCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCce
Confidence            5 456789999987  45543     22233344568899999999988888888899999999888764433 336789


Q ss_pred             eEEee-cCCCceEEEE
Q psy14511        451 SLEFA-ILKQPVSLTA  465 (488)
Q Consensus       451 ~~~~s-~~~~~~~~~~  465 (488)
                      +++|. |+++.+.+..
T Consensus       245 ~~~f~g~d~~~L~vt~  260 (297)
T 3g4e_A          245 SCCFGGKNYSEMYVTC  260 (297)
T ss_dssp             EEEEESGGGCEEEEEE
T ss_pred             EEEEeCCCCCEEEEEc
Confidence            99998 8887765544

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=99.42  E-value=9.4e-10  Score=99.91  Aligned_cols=214  Identities=11%  Similarity=-0.002  Sum_probs=134.8

Q ss_pred             CCcEEEEECCCeEEEEECCCCceEEEEecCCCCC--CceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccc
Q psy14511        208 YHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDN--AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMH  285 (488)
Q Consensus       208 ~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~  285 (488)
                      ++.+++++.++.|..+|..+++..-.........  .........  +..++++ +.++.+..+|..+++.+........
T Consensus       143 ~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g-~~~g~l~~~d~~tG~~~w~~~~~~~  219 (376)
T 3q7m_A          143 DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVG-GDNGRVSAVLMEQGQMIWQQRISQA  219 (376)
T ss_dssp             TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEEC-CTTTEEEEEETTTCCEEEEEECCC-
T ss_pred             CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEE-cCCCEEEEEECCCCcEEEEEecccC
Confidence            4567888889999999999998776665432010  000111222  3467777 7899999999999888766543211


Q ss_pred             c----------E-EEEEecCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEEC
Q psy14511        286 Q----------V-IAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDF  353 (488)
Q Consensus       286 ~----------v-~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~  353 (488)
                      .          + ......+..++.++.++.+..+|..+++.. ....  ......+..  ++..+..++ ++.+..+|.
T Consensus       220 ~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~-w~~~--~~~~~~~~~--~~~~l~~~~~~g~l~~~d~  294 (376)
T 3q7m_A          220 TGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIM-WKRE--LGSVNDFIV--DGNRIYLVDQNDRVMALTI  294 (376)
T ss_dssp             ----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEE-EEEC--CCCEEEEEE--ETTEEEEEETTCCEEEEET
T ss_pred             CCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEE-eecc--CCCCCCceE--ECCEEEEEcCCCeEEEEEC
Confidence            0          0 111225677888888999999999887532 2222  222334443  344555555 699999999


Q ss_pred             CCCCCCcccce----eeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEE-EEEcCCCCEEEEEeCCCc
Q psy14511        354 RQLDAKRPLGL----IVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILS-AVLSPDQTCVAAASADET  428 (488)
Q Consensus       354 ~~~~~~~~~~~----~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~-~~~s~~~~~l~t~~~dg~  428 (488)
                      .+++..-....    ........+..+++  +..+|.++.+|..+++.+.........+.. ...  .+..|+.++.+|.
T Consensus       295 ~tG~~~w~~~~~~~~~~~~~~~~~~~l~v--~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~--~~~~l~v~~~~G~  370 (376)
T 3q7m_A          295 DGGVTLWTQSDLLHRLLTSPVLYNGNLVV--GDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVA--ADGKLLIQAKDGT  370 (376)
T ss_dssp             TTCCEEEEECTTTTSCCCCCEEETTEEEE--ECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEE--ETTEEEEEBTTSC
T ss_pred             CCCcEEEeecccCCCcccCCEEECCEEEE--EeCCCeEEEEECCCCcEEEEEecCCCcceeCCEE--ECCEEEEEeCCCE
Confidence            88864322210    11111223556666  577899999999999988877653333322 222  3567888899999


Q ss_pred             EEEEe
Q psy14511        429 ISIWN  433 (488)
Q Consensus       429 v~iw~  433 (488)
                      |+.|+
T Consensus       371 l~~~~  375 (376)
T 3q7m_A          371 VYSIT  375 (376)
T ss_dssp             EEEEE
T ss_pred             EEEEe
Confidence            99887

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.41  E-value=1.7e-10  Score=100.93  Aligned_cols=225  Identities=12%  Similarity=0.128  Sum_probs=139.6

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCccccc-c-ccc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQ-C-HLS   81 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~-~-h~~   81 (488)
                      ++.++.+...++.|..||..+++.  ..+ .....+.+++++|+|+++++. +..|.+||.++++.. .+.... + ...
T Consensus        24 ~~~l~~~d~~~~~i~~~d~~~~~~--~~~-~~~~~~~~i~~~~dG~l~v~~-~~~l~~~d~~~g~~~-~~~~~~~~~~~~   98 (297)
T 3g4e_A           24 SNSLLFVDIPAKKVCRWDSFTKQV--QRV-TMDAPVSSVALRQSGGYVATI-GTKFCALNWKEQSAV-VLATVDNDKKNN   98 (297)
T ss_dssp             TTEEEEEETTTTEEEEEETTTCCE--EEE-ECSSCEEEEEEBTTSSEEEEE-TTEEEEEETTTTEEE-EEEECCTTCSSE
T ss_pred             CCEEEEEECCCCEEEEEECCCCcE--EEE-eCCCceEEEEECCCCCEEEEE-CCeEEEEECCCCcEE-EEEecCCCCCCC
Confidence            456777777889999999987663  222 344679999999999966554 678999998765422 221111 1 224


Q ss_pred             ceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecc
Q psy14511         82 AVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQ  161 (488)
Q Consensus        82 ~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (488)
                      .+..+++.|+|+.++++..   +...      ...    ...                                      
T Consensus        99 ~~~di~~d~dG~l~~~~~~---~~~~------~~~----~~~--------------------------------------  127 (297)
T 3g4e_A           99 RFNDGKVDPAGRYFAGTMA---EETA------PAV----LER--------------------------------------  127 (297)
T ss_dssp             EEEEEEECTTSCEEEEEEE---CCSB------TTB----CCT--------------------------------------
T ss_pred             CCCCEEECCCCCEEEecCC---cccc------ccc----ccC--------------------------------------
Confidence            5788999999975544332   1100      000    000                                      


Q ss_pred             ccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCC
Q psy14511        162 SKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDN  241 (488)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~  241 (488)
                                                                            ..+.|+.++.. ++......    ..
T Consensus       128 ------------------------------------------------------~~~~l~~~d~~-g~~~~~~~----~~  148 (297)
T 3g4e_A          128 ------------------------------------------------------HQGALYSLFPD-HHVKKYFD----QV  148 (297)
T ss_dssp             ------------------------------------------------------TCEEEEEECTT-SCEEEEEE----EE
T ss_pred             ------------------------------------------------------CCcEEEEEECC-CCEEEEee----cc
Confidence                                                                  00111112211 11111111    22


Q ss_pred             CceEEEEEcCCCCeEEEEeCCCCcEEEEEC--Cccee-----eeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECc
Q psy14511        242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHE--QEERL-----IQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVR  312 (488)
Q Consensus       242 ~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~--~~~~~-----~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~  312 (488)
                      ...+.++|+|+++.++++.+.++.|..|++  .++..     ...+..+......+++  +|++.++...++.|..||..
T Consensus       149 ~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~  228 (297)
T 3g4e_A          149 DISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPV  228 (297)
T ss_dssp             SBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTT
T ss_pred             ccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCC
Confidence            346789999999988777577889999987  34332     2233333456677777  57777777778889999998


Q ss_pred             CCCccceeeecCCccEEEEEEc-cCCcEEEEEe
Q psy14511        313 THSDYPTAITREGDVVCGLKWS-PNGRYLASGS  344 (488)
Q Consensus       313 ~~~~~~~~~~~~~~~i~~~~~s-~~~~~l~~~~  344 (488)
                      +++ ....+..+...+++++|. |+++.|..++
T Consensus       229 tG~-~~~~i~~p~~~~t~~~f~g~d~~~L~vt~  260 (297)
T 3g4e_A          229 TGK-RLQTVKLPVDKTTSCCFGGKNYSEMYVTC  260 (297)
T ss_dssp             TCC-EEEEEECSSSBEEEEEEESGGGCEEEEEE
T ss_pred             Cce-EEEEEECCCCCceEEEEeCCCCCEEEEEc
Confidence            653 555666666679999998 8888776654

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=99.41  E-value=2.3e-10  Score=111.60  Aligned_cols=241  Identities=11%  Similarity=0.029  Sum_probs=148.4

Q ss_pred             CCeEEEEECCCCceEEEEecCCCC----------------------------CCceEEEEEcCCCCeEEEEeCCCC----
Q psy14511        217 DTSVYTWNTKTNKTQLLVEYPTYD----------------------------NAYISCVAWKPRTTDLAVTNTCTE----  264 (488)
Q Consensus       217 d~~v~iw~~~~~~~~~~~~~~~~~----------------------------~~~i~~~~~~~~~~~l~~~~~~~~----  264 (488)
                      ++.|+.||..+++.+-.+......                            ......++++|+...++++ +.++    
T Consensus       182 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~-~~~g~~w~  260 (689)
T 1yiq_A          182 RGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIG-VGNGSLWD  260 (689)
T ss_dssp             BCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEE-CCCEESSC
T ss_pred             CCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEe-CCCCCccc
Confidence            689999999999877655421100                            0111257889988898888 7665    


Q ss_pred             ---------------cEEEEECCcceeeeeecc--cc-------ccE--EEEEecCC---EEEEeecCCeEEEEECcCCC
Q psy14511        265 ---------------YIDLWHEQEERLIQKLRT--HM-------HQV--IAMCWNGN---LLSCGTIGGNILHYDVRTHS  315 (488)
Q Consensus       265 ---------------~i~i~d~~~~~~~~~~~~--~~-------~~v--~~~~~~~~---~l~~~~~dg~i~i~d~~~~~  315 (488)
                                     .|..+|.++++.+..++.  |.       .+.  ..+.++|+   .++.++.+|.++++|.++++
T Consensus       261 ~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~  340 (689)
T 1yiq_A          261 PKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGE  340 (689)
T ss_dssp             HHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred             cCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCC
Confidence                           399999999998877754  21       111  23334665   78899999999999999876


Q ss_pred             ccceeeecC---------------------------Ccc-----------EEEEEEccCCcEEEEEe-cCeEEEEECCCC
Q psy14511        316 DYPTAITRE---------------------------GDV-----------VCGLKWSPNGRYLASGS-NNTVKIWDFRQL  356 (488)
Q Consensus       316 ~~~~~~~~~---------------------------~~~-----------i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~  356 (488)
                      .........                           ...           -..++++|+..++++.. +....++.....
T Consensus       341 ~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~  420 (689)
T 1yiq_A          341 LLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEA  420 (689)
T ss_dssp             EEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSC
T ss_pred             EeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeecccc
Confidence            321110000                           000           01267888888887776 344444443321


Q ss_pred             CCCcccceeeeeecCCCCEEEE----------EccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCC
Q psy14511        357 DAKRPLGLIVPKLKREGRELVT----------SHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASAD  426 (488)
Q Consensus       357 ~~~~~~~~~~~~~~~~~~~l~~----------~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~d  426 (488)
                      .   ........+.. +..+..          .....+|.|+.||+.+++.+..+..+. ++..-.++..+.+++.++.|
T Consensus       421 ~---~~~~~~~~~~~-g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~gt~d  495 (689)
T 1yiq_A          421 P---KRNPFKSMYQL-GLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT-IFNGGTLSTAGNLVFEGSAD  495 (689)
T ss_dssp             C---CCCSCTTSCCC-SSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTT
T ss_pred             c---ccccccccccc-CccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCC-CccCccceECCCEEEEECCC
Confidence            0   00000000000 000000          001125889999999999988877553 34444666788899999999


Q ss_pred             CcEEEEecCCCCcccccccc--CCcceEEeecCCCceEE
Q psy14511        427 ETISIWNCFPRDKKRKARQV--GSGSSLEFAILKQPVSL  463 (488)
Q Consensus       427 g~v~iw~~~~~~~~~~~~~~--~~v~~~~~s~~~~~~~~  463 (488)
                      |.++.||..+++.+......  ....-+.|+.+|+.+..
T Consensus       496 g~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv~  534 (689)
T 1yiq_A          496 GRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYVT  534 (689)
T ss_dssp             SEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred             CcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEEE
Confidence            99999999999988543322  22345777888886644

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=99.41  E-value=9.3e-11  Score=104.89  Aligned_cols=174  Identities=9%  Similarity=-0.010  Sum_probs=112.6

Q ss_pred             CceEEEEEcCCCCeEEEEeC---CCCcEEEEECCcceeeeeeccccccE---EEEEecCCEEEEeecCCeEEEEECcCCC
Q psy14511        242 AYISCVAWKPRTTDLAVTNT---CTEYIDLWHEQEERLIQKLRTHMHQV---IAMCWNGNLLSCGTIGGNILHYDVRTHS  315 (488)
Q Consensus       242 ~~i~~~~~~~~~~~l~~~~~---~~~~i~i~d~~~~~~~~~~~~~~~~v---~~~~~~~~~l~~~~~dg~i~i~d~~~~~  315 (488)
                      ..+..+++++++..++++..   .++.|.+||+.+++..+.+..|....   ..+.+++..+.+.+.++.+..|.     
T Consensus       120 ~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~-----  194 (343)
T 2qe8_A          120 SFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPH-----  194 (343)
T ss_dssp             CCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCC-----
T ss_pred             cccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceecee-----
Confidence            45678899987667666634   57899999998887766665542211   23344666666666777665442     


Q ss_pred             ccceeeecCCccEEEEEEccCCcEEEEEe-c-CeEEEEECC---CCCC-----Ccccce-----e--eeeecCCCCEEEE
Q psy14511        316 DYPTAITREGDVVCGLKWSPNGRYLASGS-N-NTVKIWDFR---QLDA-----KRPLGL-----I--VPKLKREGRELVT  378 (488)
Q Consensus       316 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d-~~i~iwd~~---~~~~-----~~~~~~-----~--~~~~~~~~~~l~~  378 (488)
                                ..+..++|+|+|+.|+.+. . ..+..++..   ....     ...+..     .  -.+++++|..+++
T Consensus       195 ----------~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va  264 (343)
T 2qe8_A          195 ----------LGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVG  264 (343)
T ss_dssp             ----------CCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEE
T ss_pred             ----------cccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEE
Confidence                      1367899999999888887 4 556555532   1100     001111     1  1288899988877


Q ss_pred             EccCCCCeEEEEeCCCcceeEEEeec-cccEEEEEEcCCCCEEEEEeCCCcEEEE
Q psy14511        379 SHGKQDCSLKMWEYPRLHLIEELKIH-QERILSAVLSPDQTCVAAASADETISIW  432 (488)
Q Consensus       379 ~~g~~~~~i~i~d~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~t~~~dg~v~iw  432 (488)
                        ...++.|.+||.++++........ -..+.+++|.++++++++.+..+.+.+|
T Consensus       265 --~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~~~f  317 (343)
T 2qe8_A          265 --DLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHSAPL  317 (343)
T ss_dssp             --EGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGSGGG
T ss_pred             --ccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCcccccccc
Confidence              567889999998667643333322 3468999999999888887765544433

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.39  E-value=2.1e-11  Score=108.50  Aligned_cols=171  Identities=9%  Similarity=0.025  Sum_probs=119.8

Q ss_pred             eEEEEEEccCCcEEEEecCCeEEEEeccccCc--------CCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEE
Q psy14511         38 VVCGLKWSPNGRYLASGSNNTVKIWDFRQLDA--------KRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRL  109 (488)
Q Consensus        38 ~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~--------~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~v  109 (488)
                      .++.+++++...++++|+...+.+|++++.+.        ..+.. ...+.+ |+.|+|  |+..|+++ .   ++.|++
T Consensus        39 ~~nlLais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~-~~~lp~-V~~l~f--d~~~L~v~-~---~~~l~v  110 (388)
T 1xip_A           39 SLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKW-EKEIPD-VIFVCF--HGDQVLVS-T---RNALYS  110 (388)
T ss_dssp             CCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSE-EEECTT-EEEEEE--ETTEEEEE-E---SSEEEE
T ss_pred             cccEEEEcCCCCEEEEeCCCEEEEEEhhHhhhhhccccccccceE-EeeCCC-eeEEEE--CCCEEEEE-c---CCcEEE
Confidence            68999999999999999955777799875430        11111 233566 999999  78776666 5   899999


Q ss_pred             EecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCcee
Q psy14511        110 WNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERI  189 (488)
Q Consensus       110 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (488)
                      ||+.+.............                                                              
T Consensus       111 ~dv~sl~~~~~~~~~~~~--------------------------------------------------------------  128 (388)
T 1xip_A          111 LDLEELSEFRTVTSFEKP--------------------------------------------------------------  128 (388)
T ss_dssp             EESSSTTCEEEEEECSSC--------------------------------------------------------------
T ss_pred             EEchhhhccCccceeecc--------------------------------------------------------------
Confidence            999766533222211100                                                              


Q ss_pred             ecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEE
Q psy14511        190 LEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLW  269 (488)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~  269 (488)
                                 +..+.+....++++..||.|.+||+.++....       +...|+|++|+|+|  ++++ ..||.+++|
T Consensus       129 -----------v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~-------~~~~Vs~v~WSpkG--~~vg-~~dg~i~~~  187 (388)
T 1xip_A          129 -----------VFQLKNVNNTLVILNSVNDLSALDLRTKSTKQ-------LAQNVTSFDVTNSQ--LAVL-LKDRSFQSF  187 (388)
T ss_dssp             -----------EEEEEECSSEEEEEETTSEEEEEETTTCCEEE-------EEESEEEEEECSSE--EEEE-ETTSCEEEE
T ss_pred             -----------eeeEEecCCCEEEEECCCCEEEEEccCCcccc-------ccCCceEEEEcCCc--eEEE-EcCCcEEEE
Confidence                       01122223348888899999999999887654       23479999999999  5666 789999999


Q ss_pred             ECCccee--eeee------c---cccccEEEEEe--cCCEEEE
Q psy14511        270 HEQEERL--IQKL------R---THMHQVIAMCW--NGNLLSC  299 (488)
Q Consensus       270 d~~~~~~--~~~~------~---~~~~~v~~~~~--~~~~l~~  299 (488)
                      +....+.  ..++      .   +|...|.++.|  ++.++++
T Consensus       188 ~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~  230 (388)
T 1xip_A          188 AWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV  230 (388)
T ss_dssp             EEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred             cCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence            8877664  4455      2   36789999999  4555554

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=99.39  E-value=5.8e-10  Score=108.59  Aligned_cols=203  Identities=10%  Similarity=0.064  Sum_probs=136.8

Q ss_pred             CCeEEEEECCCCceEEEEecCCCCC-----------------------------CceEEEEEcCCCCeEEEEeCCCC---
Q psy14511        217 DTSVYTWNTKTNKTQLLVEYPTYDN-----------------------------AYISCVAWKPRTTDLAVTNTCTE---  264 (488)
Q Consensus       217 d~~v~iw~~~~~~~~~~~~~~~~~~-----------------------------~~i~~~~~~~~~~~l~~~~~~~~---  264 (488)
                      ++.|+.+|..+++.+-.+.......                             .....++++|++..++++ +.++   
T Consensus       189 ~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~-~~~~~~w  267 (677)
T 1kb0_A          189 RGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVG-TGNGSPW  267 (677)
T ss_dssp             BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEE-CCCEESS
T ss_pred             CCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEE-CCCCccc
Confidence            6899999999999876665432110                             011357889999898888 6553   


Q ss_pred             ----------------cEEEEECCcceeeeeecc--cc--------cc-EEEEEecC---CEEEEeecCCeEEEEECcCC
Q psy14511        265 ----------------YIDLWHEQEERLIQKLRT--HM--------HQ-VIAMCWNG---NLLSCGTIGGNILHYDVRTH  314 (488)
Q Consensus       265 ----------------~i~i~d~~~~~~~~~~~~--~~--------~~-v~~~~~~~---~~l~~~~~dg~i~i~d~~~~  314 (488)
                                      .|..+|..+++.+..++.  |.        .+ +.....+|   +.++.++.+|.++++|..++
T Consensus       268 ~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG  347 (677)
T 1kb0_A          268 SHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNG  347 (677)
T ss_dssp             CHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTC
T ss_pred             cCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCC
Confidence                            599999999998877653  21        12 22333366   68999999999999999987


Q ss_pred             Cccceeeec----------CCccE------------------------EEEEEccCCcEEEEEe-c--------------
Q psy14511        315 SDYPTAITR----------EGDVV------------------------CGLKWSPNGRYLASGS-N--------------  345 (488)
Q Consensus       315 ~~~~~~~~~----------~~~~i------------------------~~~~~s~~~~~l~~~~-d--------------  345 (488)
                      +.....-..          ...++                        ..++++|++.++++.. +              
T Consensus       348 ~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g  427 (677)
T 1kb0_A          348 KFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFN  427 (677)
T ss_dssp             CEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTT
T ss_pred             CEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccc
Confidence            532211100          00111                        1468899888877643 1              


Q ss_pred             -----------------------------CeEEEEECCCCCCCccccee----eeeecCCCCEEEEEccCCCCeEEEEeC
Q psy14511        346 -----------------------------NTVKIWDFRQLDAKRPLGLI----VPKLKREGRELVTSHGKQDCSLKMWEY  392 (488)
Q Consensus       346 -----------------------------~~i~iwd~~~~~~~~~~~~~----~~~~~~~~~~l~~~~g~~~~~i~i~d~  392 (488)
                                                   +.|..||+.+++..-.....    ...+..++..+++  ++.++.+++||.
T Consensus       428 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~--g~~dg~l~a~D~  505 (677)
T 1kb0_A          428 QAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQ--GTADGRLVAYHA  505 (677)
T ss_dssp             CCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEE--ECTTSEEEEEET
T ss_pred             cccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEE--ECCCCcEEEEEC
Confidence                                         67999999888654333222    1256677888887  688999999999


Q ss_pred             CCcceeEEEeecc-ccEEEEEEcCCCCEEEE
Q psy14511        393 PRLHLIEELKIHQ-ERILSAVLSPDQTCVAA  422 (488)
Q Consensus       393 ~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~t  422 (488)
                      ++++.+.++.... ....-+.|+++|+.++.
T Consensus       506 ~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~  536 (677)
T 1kb0_A          506 ATGEKLWEAPTGTGVVAAPSTYMVDGRQYVS  536 (677)
T ss_dssp             TTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred             CCCceeeeeeCCCCcccCCEEEEeCCEEEEE
Confidence            9999999887443 22344667788875543

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=99.38  E-value=2.8e-09  Score=96.74  Aligned_cols=304  Identities=9%  Similarity=-0.010  Sum_probs=173.5

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccceeeccc--------CceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCccc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITRE--------GDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVN   75 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h--------~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~   75 (488)
                      ++..|.+++.++.|..+|..+++.+-..-...        ...+.+.-...+++.++...++.|..+|.++++..-... 
T Consensus        52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~-  130 (376)
T 3q7m_A           52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTK-  130 (376)
T ss_dssp             ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEE-
T ss_pred             ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECCCCCEEEEEe-
Confidence            45567777789999999999888553322211        122322222224444443348999999998866432211 


Q ss_pred             ccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccc
Q psy14511         76 NQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDR  155 (488)
Q Consensus        76 ~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (488)
                      .  ........... ++ .+++...   ++.+..+|..+|+.+.............                        
T Consensus       131 ~--~~~~~~~p~~~-~~-~v~v~~~---~g~l~~~d~~tG~~~W~~~~~~~~~~~~------------------------  179 (376)
T 3q7m_A          131 V--AGEALSRPVVS-DG-LVLIHTS---NGQLQALNEADGAVKWTVNLDMPSLSLR------------------------  179 (376)
T ss_dssp             C--SSCCCSCCEEE-TT-EEEEECT---TSEEEEEETTTCCEEEEEECCC-----C------------------------
T ss_pred             C--CCceEcCCEEE-CC-EEEEEcC---CCeEEEEECCCCcEEEEEeCCCCceeec------------------------
Confidence            1  11111111222 34 5555554   8999999999998776654431100000                        


Q ss_pred             cceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEe
Q psy14511        156 KKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVE  235 (488)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~  235 (488)
                                                                  ........++.+++++.++.+..+|..+++..-...
T Consensus       180 --------------------------------------------~~~~~~~~~~~v~~g~~~g~l~~~d~~tG~~~w~~~  215 (376)
T 3q7m_A          180 --------------------------------------------GESAPTTAFGAAVVGGDNGRVSAVLMEQGQMIWQQR  215 (376)
T ss_dssp             --------------------------------------------CCCCCEEETTEEEECCTTTEEEEEETTTCCEEEEEE
T ss_pred             --------------------------------------------CCCCcEEECCEEEEEcCCCEEEEEECCCCcEEEEEe
Confidence                                                        000011123567777788999999999998776655


Q ss_pred             cCCCCCCc--eE---EEEEcC--CCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEecCCEEEEeecCCeEEE
Q psy14511        236 YPTYDNAY--IS---CVAWKP--RTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILH  308 (488)
Q Consensus       236 ~~~~~~~~--i~---~~~~~~--~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i  308 (488)
                      ... ....  +.   .+...|  .+..++++ +.++.+..+|..+++.+.....  .....+..++..++.++.++.+..
T Consensus       216 ~~~-~~~~~~~~~~~~~~~~p~~~~~~v~~~-~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~~~~~~l~~~~~~g~l~~  291 (376)
T 3q7m_A          216 ISQ-ATGSTEIDRLSDVDTTPVVVNGVVFAL-AYNGNLTALDLRSGQIMWKREL--GSVNDFIVDGNRIYLVDQNDRVMA  291 (376)
T ss_dssp             CCC------------CCCCCCEEETTEEEEE-CTTSCEEEEETTTCCEEEEECC--CCEEEEEEETTEEEEEETTCCEEE
T ss_pred             ccc-CCCCcccccccccCCCcEEECCEEEEE-ecCcEEEEEECCCCcEEeeccC--CCCCCceEECCEEEEEcCCCeEEE
Confidence            432 1000  00   000111  24577777 7899999999999887766542  334556667888899999999999


Q ss_pred             EECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCccccee----eeeecCCCCEEEEEccCC
Q psy14511        309 YDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLI----VPKLKREGRELVTSHGKQ  383 (488)
Q Consensus       309 ~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~----~~~~~~~~~~l~~~~g~~  383 (488)
                      +|..+++............+.....  .+..|+.++ +|.+..+|..+++........    .......+..+++  +..
T Consensus       292 ~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~~~~~l~v--~~~  367 (376)
T 3q7m_A          292 LTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAADGKLLI--QAK  367 (376)
T ss_dssp             EETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEEETTEEEE--EBT
T ss_pred             EECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcceeCCEEECCEEEE--EeC
Confidence            9998875322221111112222222  244566666 599999999988654332221    1111123445555  567


Q ss_pred             CCeEEEEe
Q psy14511        384 DCSLKMWE  391 (488)
Q Consensus       384 ~~~i~i~d  391 (488)
                      +|.|+.|+
T Consensus       368 ~G~l~~~~  375 (376)
T 3q7m_A          368 DGTVYSIT  375 (376)
T ss_dssp             TSCEEEEE
T ss_pred             CCEEEEEe
Confidence            88888876

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.38  E-value=7.7e-10  Score=101.04  Aligned_cols=235  Identities=11%  Similarity=0.071  Sum_probs=145.2

Q ss_pred             ceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccc--eEEEEecC
Q psy14511         37 DVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQ--TVRLWNSM  113 (488)
Q Consensus        37 ~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~--~i~vwd~~  113 (488)
                      .....|+|+|+|+++++.. ++.|++||..++......   . ...... ++|+++++.|+++..   ++  .|.+++..
T Consensus       131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~---~-~~~~~~-ia~~~~g~~l~~~d~---~~~~~I~~~d~~  202 (409)
T 3hrp_A          131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVH---P-GFKGGK-PAVTKDKQRVYSIGW---EGTHTVYVYMKA  202 (409)
T ss_dssp             CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEE---E-TCCBCB-CEECTTSSEEEEEBS---STTCEEEEEEGG
T ss_pred             CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEee---c-cCCCCc-eeEecCCCcEEEEec---CCCceEEEEEcC
Confidence            3578999999999777776 799999999864432211   1 122233 899999998877775   44  78888876


Q ss_pred             CCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCC
Q psy14511        114 NGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAP  193 (488)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (488)
                      .+.....+......                                                                  
T Consensus       203 ~~~~~~~~g~~~~~------------------------------------------------------------------  216 (409)
T 3hrp_A          203 SGWAPTRIGQLGST------------------------------------------------------------------  216 (409)
T ss_dssp             GTTCEEEEEECCTT------------------------------------------------------------------
T ss_pred             CCceeEEeeeccch------------------------------------------------------------------
Confidence            54432222000000                                                                  


Q ss_pred             CccccceeeeeeeC--CCcEEEEECCCeEEEEECCCCceEEEEe--cCCCCCCc--eEEEEEcCCCCeEEEEeCCCCcEE
Q psy14511        194 SIINDFYTSGLDWG--YHDTLAVALDTSVYTWNTKTNKTQLLVE--YPTYDNAY--ISCVAWKPRTTDLAVTNTCTEYID  267 (488)
Q Consensus       194 ~~~~~~~~~~~~~~--~~~~~~~~~d~~v~iw~~~~~~~~~~~~--~~~~~~~~--i~~~~~~~~~~~l~~~~~~~~~i~  267 (488)
                         .......+.++  .+.++++..++.|+.||..++.......  ..+ ....  ...++|+|++..|+++....+.|+
T Consensus       217 ---~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g-~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~  292 (409)
T 3hrp_A          217 ---FSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSG-SLGTNPGPYLIYYFVDSNFYMSDQNLSSVY  292 (409)
T ss_dssp             ---SCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCS-CCCCSSCCEEEEETTTTEEEEEETTTTEEE
T ss_pred             ---hcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccC-CCCCCccccEEEeCCCCEEEEEeCCCCEEE
Confidence               00001112222  3566776678899999998876433311  111 1111  239999997666666647788999


Q ss_pred             EEECCcceeeeeeccc---------------cccEEEEEe--cCCEEEEee-cCCeEEEEECcCCCccceeeecC-----
Q psy14511        268 LWHEQEERLIQKLRTH---------------MHQVIAMCW--NGNLLSCGT-IGGNILHYDVRTHSDYPTAITRE-----  324 (488)
Q Consensus       268 i~d~~~~~~~~~~~~~---------------~~~v~~~~~--~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~-----  324 (488)
                      .|+....  +..+.++               -.....+++  +++++++-. .++.|+.|++.++.  +..+.++     
T Consensus       293 ~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~--v~~~~g~~~~~g  368 (409)
T 3hrp_A          293 KITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGY--VSTVAGQVDVAS  368 (409)
T ss_dssp             EECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTE--EEEEEECTTCBS
T ss_pred             EEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCE--EEEEeCCCCCCC
Confidence            9987653  2222222               133677888  577777777 78999999976543  2333332     


Q ss_pred             ----------CccEEEEEEccCCcEEEEEec-CeEEEEEC
Q psy14511        325 ----------GDVVCGLKWSPNGRYLASGSN-NTVKIWDF  353 (488)
Q Consensus       325 ----------~~~i~~~~~s~~~~~l~~~~d-~~i~iwd~  353 (488)
                                -.....++++|+|.++++-.. +.|+.+++
T Consensus       369 ~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~  408 (409)
T 3hrp_A          369 QIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV  408 (409)
T ss_dssp             CCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred             cCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence                      134788999999776666654 77877764

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.38  E-value=1.4e-11  Score=109.65  Aligned_cols=170  Identities=18%  Similarity=0.147  Sum_probs=126.4

Q ss_pred             CceEEEEEcCCCCeEEEEeCCCCcEEEEECCcce---------e-eeeeccccccEEEEEecCCEEEEeecCCeEEEEEC
Q psy14511        242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEER---------L-IQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDV  311 (488)
Q Consensus       242 ~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~---------~-~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~  311 (488)
                      .+++.+++++....++++ +.+ .+.+|++...+         . ......+.. |+.++|+++.|+++ .++.|++||+
T Consensus        38 ~~~nlLais~~~gll~a~-~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~fd~~~L~v~-~~~~l~v~dv  113 (388)
T 1xip_A           38 ASLQNLDISNSKSLFVAA-SGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCFHGDQVLVS-TRNALYSLDL  113 (388)
T ss_dssp             SCCBCEEEETTTTEEEEE-ETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEEETTEEEEE-ESSEEEEEES
T ss_pred             ccccEEEEcCCCCEEEEe-CCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEECCCEEEEE-cCCcEEEEEc
Confidence            368899999999999988 655 56679876433         1 111223555 99999998999998 8899999999


Q ss_pred             cCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeee--eecCCCCEEEEEccCCCCeEE
Q psy14511        312 RTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVP--KLKREGRELVTSHGKQDCSLK  388 (488)
Q Consensus       312 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~l~~~~g~~~~~i~  388 (488)
                      ++.. .......+..++.++.+.+..  ++++. ||.+.+||+.+..... +...+.  +|+|+|  +++  |..||+++
T Consensus       114 ~sl~-~~~~~~~~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~~~-~~~~Vs~v~WSpkG--~~v--g~~dg~i~  185 (388)
T 1xip_A          114 EELS-EFRTVTSFEKPVFQLKNVNNT--LVILNSVNDLSALDLRTKSTKQ-LAQNVTSFDVTNSQ--LAV--LLKDRSFQ  185 (388)
T ss_dssp             SSTT-CEEEEEECSSCEEEEEECSSE--EEEEETTSEEEEEETTTCCEEE-EEESEEEEEECSSE--EEE--EETTSCEE
T ss_pred             hhhh-ccCccceeecceeeEEecCCC--EEEEECCCCEEEEEccCCcccc-ccCCceEEEEcCCc--eEE--EEcCCcEE
Confidence            8754 444566777778888776553  66555 7999999999775433 222222  999999  455  67799999


Q ss_pred             EEeCCCcce--eEEE------e---eccccEEEEEEcCCCCEEEEE
Q psy14511        389 MWEYPRLHL--IEEL------K---IHQERILSAVLSPDQTCVAAA  423 (488)
Q Consensus       389 i~d~~~~~~--~~~~------~---~~~~~v~~~~~s~~~~~l~t~  423 (488)
                      +|+...++.  ..++      .   +|...|.++.|.+++.++++=
T Consensus       186 ~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y  231 (388)
T 1xip_A          186 SFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF  231 (388)
T ss_dssp             EEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred             EEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence            998877765  5556      2   367889999999999998873

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=99.38  E-value=2.1e-10  Score=102.16  Aligned_cols=294  Identities=11%  Similarity=0.027  Sum_probs=166.9

Q ss_pred             ceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCcccccccccceeE
Q psy14511          6 NLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKA   85 (488)
Q Consensus         6 ~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~   85 (488)
                      ..|..++.++.|..|| .+++.. .....+...+.++...++|++.+ ++++ |..+|. +++....   ..........
T Consensus        31 g~l~v~t~~~~l~~~d-~~g~~~-~~~~~~~~~~~~~~~~~~g~l~v-~t~~-l~~~d~-~g~~~~~---~~~~~~~~~~  102 (330)
T 3hxj_A           31 GTIYLGSSNKNLYAIN-TDGSVK-WFFKSGEIIECRPSIGKDGTIYF-GSDK-VYAINP-DGTEKWR---FDTKKAIVSD  102 (330)
T ss_dssp             SCEECSSTTTTTEEEC-TTSCEE-ESSCGGGEEEECCEETTTTEECC-SSCE-EEEECC-CGGGGGG---SCC-----CC
T ss_pred             CeEEEEcCCCEEEEEC-CCCcEE-EEEecCCCcccceEEecCCcEEE-ecCc-EEEECC-CCcEEEE---EECCCCcccC
Confidence            3556677788899999 777643 22334455678888888887555 4433 888886 3332221   2212222233


Q ss_pred             EEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecccccc
Q psy14511         86 IAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRT  165 (488)
Q Consensus        86 l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (488)
                      .... ++ .+.+...   ++.+..+|.. ++............                                     
T Consensus       103 ~~~~-~~-~l~v~t~---~~~l~~~d~~-g~~~~~~~~~~~~~-------------------------------------  139 (330)
T 3hxj_A          103 FTIF-ED-ILYVTSM---DGHLYAINTD-GTEKWRFKTKKAIY-------------------------------------  139 (330)
T ss_dssp             EEEE-TT-EEEEECT---TSEEEEECTT-SCEEEEEECSSCCC-------------------------------------
T ss_pred             ceEE-CC-EEEEEec---CCEEEEEcCC-CCEEEEEcCCCcee-------------------------------------
Confidence            3333 44 4555554   8899999987 66544433221100                                     


Q ss_pred             ccceeeecccccccccccCCCceeecCCCccccceeeeeee-CCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCce
Q psy14511        166 VSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDW-GYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYI  244 (488)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i  244 (488)
                                                          ..+.. ..+.+++++.++.|..+|.. ++.......   ....+
T Consensus       140 ------------------------------------~~~~~~~~g~l~vgt~~~~l~~~d~~-g~~~~~~~~---~~~~~  179 (330)
T 3hxj_A          140 ------------------------------------ATPIVSEDGTIYVGSNDNYLYAINPD-GTEKWRFKT---NDAIT  179 (330)
T ss_dssp             ------------------------------------SCCEECTTSCEEEECTTSEEEEECTT-SCEEEEEEC---SSCCC
T ss_pred             ------------------------------------eeeEEcCCCEEEEEcCCCEEEEECCC-CCEeEEEec---CCCce
Confidence                                                00111 24568888888999999998 776555554   33456


Q ss_pred             EEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEecC-CEEEEeecCCeEEEEECcCCCccceeeec
Q psy14511        245 SCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNG-NLLSCGTIGGNILHYDVRTHSDYPTAITR  323 (488)
Q Consensus       245 ~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~  323 (488)
                      .++...+++. +.++ +  +.|..+| .+++...........+.++..++ ..+..++.++.+..+|... . .......
T Consensus       180 ~~~~~d~~g~-l~v~-t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~~g-~-~~~~~~~  252 (330)
T 3hxj_A          180 SAASIGKDGT-IYFG-S--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINPDG-T-EKWRFKT  252 (330)
T ss_dssp             SCCEECTTCC-EEEE-S--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCEEEEETTTEEEEECTTS-C-EEEEEEC
T ss_pred             eeeEEcCCCE-EEEE-e--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeEEEEcCCCeEEEECCCC-C-EeEEeeC
Confidence            6677777765 5666 5  8899999 66666666655555566666643 3677777778888886432 2 2222222


Q ss_pred             CCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEee
Q psy14511        324 EGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKI  403 (488)
Q Consensus       324 ~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~  403 (488)
                      ....+..+.+.+++.+.+                                       ++.++.+..+|. +++.+..+..
T Consensus       253 ~~~~~~~~~~~~~g~l~v---------------------------------------~t~~ggl~~~d~-~g~~~~~~~~  292 (330)
T 3hxj_A          253 GKRIESSPVIGNTDTIYF---------------------------------------GSYDGHLYAINP-DGTEKWNFET  292 (330)
T ss_dssp             SSCCCSCCEECTTSCEEE---------------------------------------ECTTCEEEEECT-TSCEEEEEEC
T ss_pred             CCCccccceEcCCCeEEE---------------------------------------ecCCCCEEEECC-CCcEEEEEEc
Confidence            222122233333333222                                       233445555553 4554444444


Q ss_pred             ccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCC
Q psy14511        404 HQERILSAVLSPDQTCVAAASADETISIWNCFPRD  438 (488)
Q Consensus       404 ~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~  438 (488)
                      ....+.++...++++ |..++.+|.+++...+..+
T Consensus       293 ~~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~~~~~  326 (330)
T 3hxj_A          293 GSWIIATPVIDENGT-IYFGTRNGKFYALFNLEHH  326 (330)
T ss_dssp             SSCCCSCCEECTTCC-EEEECTTSCEEEEEC----
T ss_pred             CCccccceEEcCCCE-EEEEcCCCeEEEEeccccc
Confidence            445566777777776 5568889999988766543

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=99.37  E-value=8.7e-10  Score=97.75  Aligned_cols=216  Identities=10%  Similarity=0.007  Sum_probs=134.1

Q ss_pred             CceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCccccc-c-cccc
Q psy14511          5 GNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQ-C-HLSA   82 (488)
Q Consensus         5 g~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~-~-h~~~   82 (488)
                      +.++.+...++.|.+||..+++..  .+ .....+.+++|+|+|+++++..+ .|.+||..+++.. .+.... . ....
T Consensus        61 ~~l~~~d~~~~~i~~~d~~~~~~~--~~-~~~~~v~~i~~~~dg~l~v~~~~-gl~~~d~~~g~~~-~~~~~~~~~~~~~  135 (326)
T 2ghs_A           61 GTAWWFNILERELHELHLASGRKT--VH-ALPFMGSALAKISDSKQLIASDD-GLFLRDTATGVLT-LHAELESDLPGNR  135 (326)
T ss_dssp             TEEEEEEGGGTEEEEEETTTTEEE--EE-ECSSCEEEEEEEETTEEEEEETT-EEEEEETTTCCEE-EEECSSTTCTTEE
T ss_pred             CEEEEEECCCCEEEEEECCCCcEE--EE-ECCCcceEEEEeCCCeEEEEECC-CEEEEECCCCcEE-EEeeCCCCCCCCC
Confidence            556777777899999999876532  22 23457999999999998886644 4999998765432 121111 1 1246


Q ss_pred             eeEEEEecCCCeEEeeeCCc-ccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecc
Q psy14511         83 VKAIAWCPWEPTLLATGGGI-CDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQ  161 (488)
Q Consensus        83 v~~l~~~~~~~~l~~~~~~~-~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (488)
                      +.++.++|+|+.+++..... ..+...+|.                                                  
T Consensus       136 ~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~--------------------------------------------------  165 (326)
T 2ghs_A          136 SNDGRMHPSGALWIGTMGRKAETGAGSIYH--------------------------------------------------  165 (326)
T ss_dssp             EEEEEECTTSCEEEEEEETTCCTTCEEEEE--------------------------------------------------
T ss_pred             CCCEEECCCCCEEEEeCCCcCCCCceEEEE--------------------------------------------------
Confidence            88999999997544432200 001112222                                                  


Q ss_pred             ccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCC
Q psy14511        162 SKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDN  241 (488)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~  241 (488)
                                                                                   ++  +++......    ..
T Consensus       166 -------------------------------------------------------------~~--~g~~~~~~~----~~  178 (326)
T 2ghs_A          166 -------------------------------------------------------------VA--KGKVTKLFA----DI  178 (326)
T ss_dssp             -------------------------------------------------------------EE--TTEEEEEEE----EE
T ss_pred             -------------------------------------------------------------Ee--CCcEEEeeC----CC
Confidence                                                                         22  111111111    11


Q ss_pred             CceEEEEEcCCCCeEEEEeCCCCcEEEEECC--cc-e-----eeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEEC
Q psy14511        242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQ--EE-R-----LIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDV  311 (488)
Q Consensus       242 ~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~--~~-~-----~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~  311 (488)
                      .....++|+|+++.++++.+.++.|.+|++.  ++ .     ....+.........+.+  +|++.++...++.|..||.
T Consensus       179 ~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~  258 (326)
T 2ghs_A          179 SIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT  258 (326)
T ss_dssp             SSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT
T ss_pred             cccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC
Confidence            2356899999999887774667899999985  44 2     12223223345567777  5676666666788999998


Q ss_pred             cCCCccceeeecCCccEEEEEEc-cCCcEEEEEe
Q psy14511        312 RTHSDYPTAITREGDVVCGLKWS-PNGRYLASGS  344 (488)
Q Consensus       312 ~~~~~~~~~~~~~~~~i~~~~~s-~~~~~l~~~~  344 (488)
                      . + .....+..+...+.+++|+ |+++.|++++
T Consensus       259 ~-g-~~~~~i~~~~~~~~~~af~g~d~~~L~vt~  290 (326)
T 2ghs_A          259 D-G-NHIARYEVPGKQTTCPAFIGPDASRLLVTS  290 (326)
T ss_dssp             T-C-CEEEEEECSCSBEEEEEEESTTSCEEEEEE
T ss_pred             C-C-CEEEEEECCCCCcEEEEEecCCCCEEEEEe
Confidence            4 3 3445555566679999998 8887776554

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.35  E-value=2.2e-09  Score=97.98  Aligned_cols=198  Identities=8%  Similarity=0.019  Sum_probs=113.1

Q ss_pred             CcEEEEECCC--eEEEEECCCCceEEEE-ecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeee----ec
Q psy14511        209 HDTLAVALDT--SVYTWNTKTNKTQLLV-EYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQK----LR  281 (488)
Q Consensus       209 ~~~~~~~~d~--~v~iw~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~----~~  281 (488)
                      +.++++..++  .|.+++...+...... .........+.+++++|++..|+++ ..++.|+.||..++.....    ..
T Consensus       183 ~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~-d~~~~I~~~d~~~~~~~~~~~~~~~  261 (409)
T 3hrp_A          183 QRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFV-DSNKNFGRFNVKTQEVTLIKQLELS  261 (409)
T ss_dssp             SEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEE-CTTCEEEEEETTTCCEEEEEECCCC
T ss_pred             CcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEE-ECCCcEEEEECCCCCEEEEeccccc
Confidence            4456666544  7999998766543333 1111034567889999966677777 7789999999987653222    11


Q ss_pred             ccccc--EEEEEec---CCEEEEeecCCeEEEEECcCCCccceeeecCC---------------ccEEEEEEccCCcEEE
Q psy14511        282 THMHQ--VIAMCWN---GNLLSCGTIGGNILHYDVRTHSDYPTAITREG---------------DVVCGLKWSPNGRYLA  341 (488)
Q Consensus       282 ~~~~~--v~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~---------------~~i~~~~~s~~~~~l~  341 (488)
                      ++...  ...++++   +.++++-..++.|+.|+....   ...+.++.               .....++++|+|++++
T Consensus       262 g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~---~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyv  338 (409)
T 3hrp_A          262 GSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE---CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYI  338 (409)
T ss_dssp             SCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC---EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEE
T ss_pred             CCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC---EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEE
Confidence            21111  1266663   455556666788999987642   22222221               2366788888887666


Q ss_pred             EEe-c-CeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCE
Q psy14511        342 SGS-N-NTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTC  419 (488)
Q Consensus       342 ~~~-d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~  419 (488)
                      +-. . +.|+.|++.++.                 ....+ |.. +.   +....+..   ....-.....++++|++.+
T Consensus       339 ad~~~~~~I~~~~~~~G~-----------------v~~~~-g~~-~~---~g~~~g~~---~~~~~~~P~giavd~~g~l  393 (409)
T 3hrp_A          339 VDGFKGYCLRKLDILDGY-----------------VSTVA-GQV-DV---ASQIDGTP---LEATFNYPYDICYDGEGGY  393 (409)
T ss_dssp             EETTTTCEEEEEETTTTE-----------------EEEEE-ECT-TC---BSCCCBST---TTCCBSSEEEEEECSSSEE
T ss_pred             EeCCCCCEEEEEECCCCE-----------------EEEEe-CCC-CC---CCcCCCCh---hceEeCCceEEEEcCCCCE
Confidence            554 4 667777654331                 00000 100 00   00000000   0011245789999999888


Q ss_pred             EEEEeCCCcEEEEecC
Q psy14511        420 VAAASADETISIWNCF  435 (488)
Q Consensus       420 l~t~~~dg~v~iw~~~  435 (488)
                      +++-..++.|+.++++
T Consensus       394 yVad~~n~~Ir~i~~e  409 (409)
T 3hrp_A          394 WIAEAWGKAIRKYAVE  409 (409)
T ss_dssp             EEEESTTCEEEEEEEC
T ss_pred             EEEECCCCeEEEEEeC
Confidence            8888888899887753

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=99.34  E-value=9.5e-10  Score=97.48  Aligned_cols=213  Identities=8%  Similarity=-0.051  Sum_probs=138.5

Q ss_pred             ceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCcccee
Q psy14511        243 YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTA  320 (488)
Q Consensus       243 ~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~  320 (488)
                      ...+.+|+|++..++.....++.|..||..+++.. .+. ....+.++.+  +++++++ +. ..|.+||..++.. ...
T Consensus        50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~-~~-~gl~~~d~~~g~~-~~~  124 (326)
T 2ghs_A           50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIA-SD-DGLFLRDTATGVL-TLH  124 (326)
T ss_dssp             BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEE-ET-TEEEEEETTTCCE-EEE
T ss_pred             CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEE-EC-CCEEEEECCCCcE-EEE
Confidence            35678899987666666477889999999876543 232 2456888887  5666554 44 4499999876542 111


Q ss_pred             eec----CCccEEEEEEccCCcEEEEEec-------CeEEEEECCCCCCCcccce----eeeeecCCCCEEEEEccCCCC
Q psy14511        321 ITR----EGDVVCGLKWSPNGRYLASGSN-------NTVKIWDFRQLDAKRPLGL----IVPKLKREGRELVTSHGKQDC  385 (488)
Q Consensus       321 ~~~----~~~~i~~~~~s~~~~~l~~~~d-------~~i~iwd~~~~~~~~~~~~----~~~~~~~~~~~l~~~~g~~~~  385 (488)
                      ...    ....+..++++|+|+++++..+       +.|..++  +++.......    ...+|+|+++.++++ ...++
T Consensus       125 ~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~-~~~~~  201 (326)
T 2ghs_A          125 AELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFV-DTKVN  201 (326)
T ss_dssp             ECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEE-ETTTC
T ss_pred             eeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEE-ECCCC
Confidence            111    1245889999999997776542       3555555  3322111111    112889999988764 45678


Q ss_pred             eEEEEeCC--Cc-ce-----eEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcccc-ccccCCcceEEee-
Q psy14511        386 SLKMWEYP--RL-HL-----IEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRK-ARQVGSGSSLEFA-  455 (488)
Q Consensus       386 ~i~i~d~~--~~-~~-----~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~-~~~~~~v~~~~~s-  455 (488)
                      .|.+||+.  ++ +.     ...+......+..+++.++|+++++...++.|..|+. +++.... ......+.+++|+ 
T Consensus       202 ~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g  280 (326)
T 2ghs_A          202 RLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIG  280 (326)
T ss_dssp             EEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEES
T ss_pred             EEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEec
Confidence            99999985  55 32     2222223456788999999998887777789999998 4554432 2334468899998 


Q ss_pred             cCCCceEEE
Q psy14511        456 ILKQPVSLT  464 (488)
Q Consensus       456 ~~~~~~~~~  464 (488)
                      |++..+.+.
T Consensus       281 ~d~~~L~vt  289 (326)
T 2ghs_A          281 PDASRLLVT  289 (326)
T ss_dssp             TTSCEEEEE
T ss_pred             CCCCEEEEE
Confidence            887766443

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=99.33  E-value=8.1e-10  Score=107.60  Aligned_cols=254  Identities=11%  Similarity=0.004  Sum_probs=164.2

Q ss_pred             CCCcEEEEECCCeEEEEECCCCceEEEEecC-CCCC-CceEE-EEEcCCCCeEEEEeC-----CCCcEEEEECCcceeee
Q psy14511        207 GYHDTLAVALDTSVYTWNTKTNKTQLLVEYP-TYDN-AYISC-VAWKPRTTDLAVTNT-----CTEYIDLWHEQEERLIQ  278 (488)
Q Consensus       207 ~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~-~~i~~-~~~~~~~~~l~~~~~-----~~~~i~i~d~~~~~~~~  278 (488)
                      .++.+++++.++.|..+|..+++..-.+... .... ..+.+ ...  .+..++++.+     .++.|+.+|..+++.+.
T Consensus       127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W  204 (677)
T 1kb0_A          127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKW  204 (677)
T ss_dssp             ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred             ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEE
Confidence            3567888889999999999999987776653 1000 11111 111  2345666522     26899999999998887


Q ss_pred             eecccccc--------------------------------EEEEEe--cCCEEEEeecCC-------------------e
Q psy14511        279 KLRTHMHQ--------------------------------VIAMCW--NGNLLSCGTIGG-------------------N  305 (488)
Q Consensus       279 ~~~~~~~~--------------------------------v~~~~~--~~~~l~~~~~dg-------------------~  305 (488)
                      .+......                                ...+++  ++..++.+..++                   .
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~s  284 (677)
T 1kb0_A          205 RWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLAS  284 (677)
T ss_dssp             EEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTE
T ss_pred             EeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEE
Confidence            66432111                                012344  567888776654                   5


Q ss_pred             EEEEECcCCCccceeee-cCC-------ccEEEEEEccCC---cEEEEEe-cCeEEEEECCCCCCCcccce---------
Q psy14511        306 ILHYDVRTHSDYPTAIT-REG-------DVVCGLKWSPNG---RYLASGS-NNTVKIWDFRQLDAKRPLGL---------  364 (488)
Q Consensus       306 i~i~d~~~~~~~~~~~~-~~~-------~~i~~~~~s~~~---~~l~~~~-d~~i~iwd~~~~~~~~~~~~---------  364 (488)
                      |..+|..+++..-.... .|.       ....-+....+|   ..++.++ +|.++++|..+++.......         
T Consensus       285 v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~  364 (677)
T 1kb0_A          285 IVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGY  364 (677)
T ss_dssp             EEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEE
T ss_pred             EEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCccccc
Confidence            99999998764332222 121       112223444577   5777777 59999999998865322110         


Q ss_pred             -------------------e------------eeeecCCCCEEEEEccC-------------------------------
Q psy14511        365 -------------------I------------VPKLKREGRELVTSHGK-------------------------------  382 (488)
Q Consensus       365 -------------------~------------~~~~~~~~~~l~~~~g~-------------------------------  382 (488)
                                         .            ..+++|++..+++....                               
T Consensus       365 d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~  444 (677)
T 1kb0_A          365 DKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAK  444 (677)
T ss_dssp             CTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCE
T ss_pred             CCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccccccccccccc
Confidence                               0            12678888888774220                               


Q ss_pred             ----------CCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcccccc--ccCCcc
Q psy14511        383 ----------QDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKAR--QVGSGS  450 (488)
Q Consensus       383 ----------~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~~~--~~~~v~  450 (488)
                                ..+.|..||+.+++.+.++. +..++....++.++..++.++.||.+++||..+++.+....  ......
T Consensus       445 ~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~  523 (677)
T 1kb0_A          445 FFNAEPPKSKPFGRLLAWDPVAQKAAWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAA  523 (677)
T ss_dssp             EECSSCCCSCCEEEEEEEETTTTEEEEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSC
T ss_pred             ccccccCCCCCccEEEEEeCCCCcEEeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccC
Confidence                      12789999999999988876 34445566677788899999999999999999999885433  223334


Q ss_pred             eEEeecCCCceEE
Q psy14511        451 SLEFAILKQPVSL  463 (488)
Q Consensus       451 ~~~~s~~~~~~~~  463 (488)
                      -+.|.++|+.+..
T Consensus       524 p~~y~~~G~~~v~  536 (677)
T 1kb0_A          524 PSTYMVDGRQYVS  536 (677)
T ss_dssp             CEEEEETTEEEEE
T ss_pred             CEEEEeCCEEEEE
Confidence            5666777776543

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=99.31  E-value=4.3e-10  Score=110.55  Aligned_cols=221  Identities=11%  Similarity=0.118  Sum_probs=144.7

Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCC----CcEEEEECCcceeeee-eccccccEEEEEe-cCCEEEEeecCC---------
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCT----EYIDLWHEQEERLIQK-LRTHMHQVIAMCW-NGNLLSCGTIGG---------  304 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~----~~i~i~d~~~~~~~~~-~~~~~~~v~~~~~-~~~~l~~~~~dg---------  304 (488)
                      +...+..++|||||++++.+.+..    ..|+++|+.+++.+.. +....  ...++| |++.|+.++.+.         
T Consensus       127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k--~~~~~WsDg~~l~y~~~~~~~~~~~~~~  204 (693)
T 3iuj_A          127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVK--FSGISWLGNEGFFYSSYDKPDGSELSAR  204 (693)
T ss_dssp             SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEE--SCCCEEETTTEEEEEESSCCC-------
T ss_pred             CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCce--eccEEEeCCCEEEEEEecCccccccccc
Confidence            445688899999999999763333    4799999999876543 22111  123344 888888887774         


Q ss_pred             ----eEEEEECcCCCccceee---ec-CCccEEEEEEccCCcEEEEEe--c---CeEEEEECCCCCC-Cccccee----e
Q psy14511        305 ----NILHYDVRTHSDYPTAI---TR-EGDVVCGLKWSPNGRYLASGS--N---NTVKIWDFRQLDA-KRPLGLI----V  366 (488)
Q Consensus       305 ----~i~i~d~~~~~~~~~~~---~~-~~~~i~~~~~s~~~~~l~~~~--d---~~i~iwd~~~~~~-~~~~~~~----~  366 (488)
                          .|++|++.+.......+   .. +......+.|+|||++|+...  +   +.++++|+.+.+. ...+...    .
T Consensus       205 ~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~  284 (693)
T 3iuj_A          205 TDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADV  284 (693)
T ss_dssp             CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCE
T ss_pred             CCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceE
Confidence                49999998754322222   22 344577899999999886544  2   5899999976531 1222111    1


Q ss_pred             eeecCCCCEEEEEccCC--CCeEEEEeCCCcce--eEEEeeccccEEEEEEcCCCCEEEEEeCCC---cEEEEecCCCCc
Q psy14511        367 PKLKREGRELVTSHGKQ--DCSLKMWEYPRLHL--IEELKIHQERILSAVLSPDQTCVAAASADE---TISIWNCFPRDK  439 (488)
Q Consensus       367 ~~~~~~~~~l~~~~g~~--~~~i~i~d~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg---~v~iw~~~~~~~  439 (488)
                      ..++++|..++..+...  .+.|..+|+.+++.  ...+..|...+.  .|++++++|+....++   .|++|++..+..
T Consensus       285 ~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~  362 (693)
T 3iuj_A          285 SLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKRV  362 (693)
T ss_dssp             EEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSCEE
T ss_pred             EEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCCee
Confidence            14778888777653322  47899999987654  345666666555  8999999888776544   689999886544


Q ss_pred             ccc-ccccCCcceEEeecCCCceEEE
Q psy14511        440 KRK-ARQVGSGSSLEFAILKQPVSLT  464 (488)
Q Consensus       440 ~~~-~~~~~~v~~~~~s~~~~~~~~~  464 (488)
                      ... ....+.+..+.+++++..+.+.
T Consensus       363 ~~l~~p~~~~~~~~~~~~d~~~l~~~  388 (693)
T 3iuj_A          363 REVALPGLGSVSGFNGKHDDPALYFG  388 (693)
T ss_dssp             EEECCSSSSEEEECCCCTTCSCEEEE
T ss_pred             EEeecCCCceEEeeecCCCCCEEEEE
Confidence            332 2233456677778887776543

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=99.28  E-value=2.1e-09  Score=95.85  Aligned_cols=244  Identities=15%  Similarity=0.132  Sum_probs=157.0

Q ss_pred             eEEEEECCC-----CceEEEEecCCCCCCceEEEEE-----------c--CCCCeEEEEeCCCCcEEEEECCcc----ee
Q psy14511        219 SVYTWNTKT-----NKTQLLVEYPTYDNAYISCVAW-----------K--PRTTDLAVTNTCTEYIDLWHEQEE----RL  276 (488)
Q Consensus       219 ~v~iw~~~~-----~~~~~~~~~~~~~~~~i~~~~~-----------~--~~~~~l~~~~~~~~~i~i~d~~~~----~~  276 (488)
                      .|.+.|++.     ++.+....++. .........|           +  +++++|++.+..++.|.++|+.+.    +.
T Consensus        44 ~la~vDvdp~s~ty~~vi~~~~~p~-~gde~HH~gwn~css~~~~~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~  122 (462)
T 2ece_A           44 FIAVVDVNPKSETYSKIVHKVELPY-INDELHHFGWNACSSALCPNGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKI  122 (462)
T ss_dssp             EEEEEECCTTSTTTTSEEEEEECSS-SCCCBCCCEESCCGGGGSTTCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEE
T ss_pred             eEEEEECCCCCCCcceEEEEEECCC-CCCcccccchhhhhhhcccccCCCccCCEEEEccCCCCeEEEEECCCCCCCcee
Confidence            466677765     66666666654 3333444444           7  889999998888999999998754    55


Q ss_pred             eeeecc-------ccccEEEEEe--cCCEEEEeecC------CeEEEEECcCCCccceeeecCC---ccEEEEEEccCCc
Q psy14511        277 IQKLRT-------HMHQVIAMCW--NGNLLSCGTIG------GNILHYDVRTHSDYPTAITREG---DVVCGLKWSPNGR  338 (488)
Q Consensus       277 ~~~~~~-------~~~~v~~~~~--~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~---~~i~~~~~s~~~~  338 (488)
                      ...++.       ....-..+..  ++ +++++..+      |.|.++|..+.+ .+..+....   .--+.+.|+|+++
T Consensus       123 ~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~-v~~~~~~~~~~~~~~Yd~~~~p~~~  200 (462)
T 2ece_A          123 IKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFE-PLGKWEIDRGDQYLAYDFWWNLPNE  200 (462)
T ss_dssp             EEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCC-EEEECCSBCTTCCCCCCEEEETTTT
T ss_pred             eeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCe-EEEEEccCCCCccccceEEECCCCC
Confidence            555520       1112222333  66 66665555      789999998764 444443221   2234578899999


Q ss_pred             EEEEEe--------------------cCeEEEEECCCCCCCccccee----ee-----eecCCCCEEEEEccC-----CC
Q psy14511        339 YLASGS--------------------NNTVKIWDFRQLDAKRPLGLI----VP-----KLKREGRELVTSHGK-----QD  384 (488)
Q Consensus       339 ~l~~~~--------------------d~~i~iwd~~~~~~~~~~~~~----~~-----~~~~~~~~l~~~~g~-----~~  384 (488)
                      .+++..                    ..+|.+||+.+.+..+.+..-    ..     +|+|++++++++ ..     .+
T Consensus       201 ~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~-~e~~~~~Ls  279 (462)
T 2ece_A          201 VLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFIN-MVVSLKDLS  279 (462)
T ss_dssp             EEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEE-EEEETTTCC
T ss_pred             EEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEE-EeeeccCCC
Confidence            988884                    489999999986544433331    11     469999999885 33     56


Q ss_pred             CeEEEEeCCCcce--eEEE--eec----------------cccEEEEEEcCCCCEEEEEeC-CCcEEEEecCCCCcc---
Q psy14511        385 CSLKMWEYPRLHL--IEEL--KIH----------------QERILSAVLSPDQTCVAAASA-DETISIWNCFPRDKK---  440 (488)
Q Consensus       385 ~~i~i~d~~~~~~--~~~~--~~~----------------~~~v~~~~~s~~~~~l~t~~~-dg~v~iw~~~~~~~~---  440 (488)
                      ++|.+|....++.  .+.+  ...                ......+.+||||++|.++.. .+.|.++|+......   
T Consensus       280 s~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv  359 (462)
T 2ece_A          280 SSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLT  359 (462)
T ss_dssp             EEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEE
T ss_pred             ceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEE
Confidence            7887766544321  1111  110                134788999999999887764 689999999643222   


Q ss_pred             cccccc---------------CCcceEEeecCCCceEEEEe
Q psy14511        441 RKARQV---------------GSGSSLEFAILKQPVSLTAL  466 (488)
Q Consensus       441 ~~~~~~---------------~~v~~~~~s~~~~~~~~~~~  466 (488)
                      ......               +....++++|||+.+.....
T Consensus       360 ~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaNs  400 (462)
T 2ece_A          360 GKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTNS  400 (462)
T ss_dssp             EEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEECC
T ss_pred             EEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEcC
Confidence            222122               13688999999999877663

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=99.27  E-value=2.6e-09  Score=93.84  Aligned_cols=76  Identities=12%  Similarity=-0.013  Sum_probs=52.2

Q ss_pred             eeecccCceEEEEEEccCCcE-EEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceE
Q psy14511         30 TAITREGDVVCGLKWSPNGRY-LASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTV  107 (488)
Q Consensus        30 ~~~~~h~~~V~~l~~sp~g~~-las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i  107 (488)
                      +.+..+......+.|+|+|+. +++.. ++.|..|+.. ++    ...+..+...+..++++++|+ ++++...  ++.|
T Consensus        38 ~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~----~~~~~~~~~~~~gl~~d~dG~-l~v~~~~--~~~v  109 (305)
T 3dr2_A           38 LTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GT----VDVLLDATAFTNGNAVDAQQR-LVHCEHG--RRAI  109 (305)
T ss_dssp             EEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SC----EEEEEESCSCEEEEEECTTSC-EEEEETT--TTEE
T ss_pred             EEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CC----EEEEeCCCCccceeeECCCCC-EEEEECC--CCEE
Confidence            344445556788999999994 45554 8999999873 32    122334556789999999997 4444432  6789


Q ss_pred             EEEecC
Q psy14511        108 RLWNSM  113 (488)
Q Consensus       108 ~vwd~~  113 (488)
                      .+|+..
T Consensus       110 ~~~~~~  115 (305)
T 3dr2_A          110 TRSDAD  115 (305)
T ss_dssp             EEECTT
T ss_pred             EEECCC
Confidence            999874

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=99.26  E-value=3e-08  Score=85.15  Aligned_cols=250  Identities=9%  Similarity=0.054  Sum_probs=149.3

Q ss_pred             CceEEEeecCCeEEEEEcccCccc----ceeecccCceEEEEEEccCCcEEEEec--CCeEEEEeccccCcCCCcccccc
Q psy14511          5 GNLLSCGTIGGNILHYDVRTHSDY----PTAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAKRPQVNNQC   78 (488)
Q Consensus         5 g~~la~g~~dg~i~iwd~~~~~~~----~~~~~~h~~~V~~l~~sp~g~~las~~--d~~i~vwd~~~~~~~~~~~~~~~   78 (488)
                      |.+|..+. .+.|+.+++......    ...+.........++|+|+++.|..+.  ++.|.+++..+... ..+  ...
T Consensus         1 ~~~l~~~~-~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-~~~--~~~   76 (267)
T 1npe_A            1 GTHLLFAQ-TGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEP-TTI--IRQ   76 (267)
T ss_dssp             CEEEEEEE-EEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC-EEE--ECT
T ss_pred             CcEEEEEc-CCeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCc-EEE--EEC
Confidence            45666665 358999998765421    112222234578999999776666554  78999999875322 111  111


Q ss_pred             cccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccce
Q psy14511         79 HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKV  158 (488)
Q Consensus        79 h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (488)
                      .......+++.+++..++.+...  .+.|.+++++.... ..+.....                                
T Consensus        77 ~~~~p~~ia~d~~~~~lyv~d~~--~~~I~~~~~~g~~~-~~~~~~~~--------------------------------  121 (267)
T 1npe_A           77 DLGSPEGIALDHLGRTIFWTDSQ--LDRIEVAKMDGTQR-RVLFDTGL--------------------------------  121 (267)
T ss_dssp             TCCCEEEEEEETTTTEEEEEETT--TTEEEEEETTSCSC-EEEECSSC--------------------------------
T ss_pred             CCCCccEEEEEecCCeEEEEECC--CCEEEEEEcCCCCE-EEEEECCC--------------------------------
Confidence            22467899999987778777663  78899998753221 11110000                                


Q ss_pred             eccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC--CCcEEEEEC---CCeEEEEECCCCceEEE
Q psy14511        159 LNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG--YHDTLAVAL---DTSVYTWNTKTNKTQLL  233 (488)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~---d~~v~iw~~~~~~~~~~  233 (488)
                                                              .....+.++  .+.++.+..   .+.|..+++........
T Consensus       122 ----------------------------------------~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~  161 (267)
T 1npe_A          122 ----------------------------------------VNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRIL  161 (267)
T ss_dssp             ----------------------------------------SSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEE
T ss_pred             ----------------------------------------CCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEE
Confidence                                                    000112222  244555543   36788888765433222


Q ss_pred             EecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEecCCEEEEee-cCCeEEEEECc
Q psy14511        234 VEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGT-IGGNILHYDVR  312 (488)
Q Consensus       234 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-~dg~i~i~d~~  312 (488)
                      ...   .......++++|+++.|+++....+.|..+|.........+.. ......++.++..++.+. .++.|..+|..
T Consensus       162 ~~~---~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d~~~lyva~~~~~~v~~~d~~  237 (267)
T 1npe_A          162 AQD---NLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG-LQYPFAVTSYGKNLYYTDWKTNSVIAMDLA  237 (267)
T ss_dssp             ECT---TCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC-CCSEEEEEEETTEEEEEETTTTEEEEEETT
T ss_pred             EEC---CCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC-CCCceEEEEeCCEEEEEECCCCeEEEEeCC
Confidence            221   2346789999999888887757778999999986544333332 223356677665555554 56899999998


Q ss_pred             CCCccceeeecCC-ccEEEEEEccCCc
Q psy14511        313 THSDYPTAITREG-DVVCGLKWSPNGR  338 (488)
Q Consensus       313 ~~~~~~~~~~~~~-~~i~~~~~s~~~~  338 (488)
                      +++ ....+.... .....+++.|++.
T Consensus       238 ~g~-~~~~i~~g~~~~p~gi~~~~~~~  263 (267)
T 1npe_A          238 ISK-EMDTFHPHKQTRLYGITIALSQC  263 (267)
T ss_dssp             TTE-EEEEECCSSCCCCCCEEEECSCC
T ss_pred             CCC-ceEEEccccccccceeeecCccC
Confidence            764 344443322 2356788888764

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=99.25  E-value=2.8e-09  Score=104.02  Aligned_cols=274  Identities=14%  Similarity=0.112  Sum_probs=160.0

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccceeecc-cCceEEEEEEcc---CCcEEEEec------CCeEEEEeccccCcCCCc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITR-EGDVVCGLKWSP---NGRYLASGS------NNTVKIWDFRQLDAKRPQ   73 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~-h~~~V~~l~~sp---~g~~las~~------d~~i~vwd~~~~~~~~~~   73 (488)
                      ++..|++++.|+.|..+|..+++.+-..-.. +......+..+|   ++..++..+      ++.|..||.++++..-..
T Consensus       120 ~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~  199 (689)
T 1yiq_A          120 WKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRF  199 (689)
T ss_dssp             ETTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred             ECCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEe
Confidence            3556777888999999999999865443322 211111122233   565555432      589999999887643222


Q ss_pred             cccc----------------------------ccccceeEEEEecCCCeEEeeeCCcccc-------------------e
Q psy14511         74 VNNQ----------------------------CHLSAVKAIAWCPWEPTLLATGGGICDQ-------------------T  106 (488)
Q Consensus        74 ~~~~----------------------------~h~~~v~~l~~~~~~~~l~~~~~~~~d~-------------------~  106 (488)
                      ....                            ++......+++.|++..+++...   ++                   .
T Consensus       200 ~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~---~g~~w~~~~~~~~~gd~~y~~~  276 (689)
T 1yiq_A          200 YTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVG---NGSLWDPKWRSQAKGDNLFLSS  276 (689)
T ss_dssp             ESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECC---CEESSCHHHHHTTCSCCTTTTE
T ss_pred             cccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCC---CCCccccCCCCCCCCCceeeee
Confidence            1100                            11111236788888776655544   54                   3


Q ss_pred             EEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCC
Q psy14511        107 VRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKP  186 (488)
Q Consensus       107 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (488)
                      |..||..+|+.+..+..............      ..                                           
T Consensus       277 v~AlD~~TG~~~W~~~~~~~d~wd~~~~~------~~-------------------------------------------  307 (689)
T 1yiq_A          277 IVAVNADTGEYVWHYQTTPGDAWDYTATQ------HM-------------------------------------------  307 (689)
T ss_dssp             EEEEETTTCCEEEEEESSTTCCSCCCCCS------CE-------------------------------------------
T ss_pred             EEEEEccCCceeEeeecCCcccccccCCC------Cc-------------------------------------------
Confidence            89999999988776654322111000000      00                                           


Q ss_pred             ceeecCCCccccceeeeeeeCC---CcEEEEECCCeEEEEECCCCceEEEEecCCC------------------------
Q psy14511        187 ERILEAPSIINDFYTSGLDWGY---HDTLAVALDTSVYTWNTKTNKTQLLVEYPTY------------------------  239 (488)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~------------------------  239 (488)
                                   ....+...+   ..++.+..+|.++++|..+++.+....+...                        
T Consensus       308 -------------~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~  374 (689)
T 1yiq_A          308 -------------ILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWK  374 (689)
T ss_dssp             -------------EEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTT
T ss_pred             -------------EEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccC
Confidence                         000001111   1355666899999999999987644332110                        


Q ss_pred             -CC-----------CceEEEEEcCCCCeEEEEeC--------------------------------------------CC
Q psy14511        240 -DN-----------AYISCVAWKPRTTDLAVTNT--------------------------------------------CT  263 (488)
Q Consensus       240 -~~-----------~~i~~~~~~~~~~~l~~~~~--------------------------------------------~~  263 (488)
                       ..           ..-..++++|+...+++...                                            .+
T Consensus       375 ~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~  454 (689)
T 1yiq_A          375 NGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWS  454 (689)
T ss_dssp             SSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCE
T ss_pred             CCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcc
Confidence             00           00113688888887776511                                            13


Q ss_pred             CcEEEEECCcceeeeeeccccccE-EEEEecCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEE
Q psy14511        264 EYIDLWHEQEERLIQKLRTHMHQV-IAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLAS  342 (488)
Q Consensus       264 ~~i~i~d~~~~~~~~~~~~~~~~v-~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~  342 (488)
                      |.|..||+.+++.+..+..+.... ..+...+.+++.++.||.++.||.++++........+.....-+.|..+|+..+.
T Consensus       455 g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv~  534 (689)
T 1yiq_A          455 GKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYVT  534 (689)
T ss_dssp             EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred             eeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEEE
Confidence            789999999999888876544222 1344478899999999999999999986443333333222234667788874443

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=99.24  E-value=1.5e-06  Score=87.06  Aligned_cols=373  Identities=8%  Similarity=0.028  Sum_probs=218.4

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCccc----cccc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVN----NQCH   79 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~----~~~h   79 (488)
                      +|++.+ |+.++-+..||..+++........+...|.++...++|++.+...++-+.+||..+.+.......    ..-.
T Consensus       183 ~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~  261 (795)
T 4a2l_A          183 GDQIYI-GTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWVATEGAGLFLINPKTKEIKNYLHSPSNPKSIS  261 (795)
T ss_dssp             TTEEEE-EESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTEEEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCS
T ss_pred             CCCEEE-EECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEEEECCCCeEEEeCCCCeEEEeecCCCCccccC
Confidence            454444 55554588899876653211112235679999999999877765554588898765322111100    0012


Q ss_pred             ccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeecccccee
Q psy14511         80 LSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVL  159 (488)
Q Consensus        80 ~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (488)
                      ...|.++...++|...+.+ .   + -|.+|+..++........... ..                              
T Consensus       262 ~~~i~~i~~d~~g~lWigt-~---~-Gl~~~~~~~~~~~~~~~~~~~-~~------------------------------  305 (795)
T 4a2l_A          262 SNYIRSLAMDSQNRLWIGT-F---N-DLNIYHEGTDSFASYSSNPVE-NG------------------------------  305 (795)
T ss_dssp             CSBEEEEEECTTSCEEEEE-S---S-CEEEEETTTTEEEEECCCTTS-TT------------------------------
T ss_pred             CCeEEEEEEcCCCCEEEEe-C---C-hhheEcCCCCeEEEEecCCCC-CC------------------------------
Confidence            3579999998888644433 2   4 688999876653321111000 00                              


Q ss_pred             ccccccccceeeecccccccccccCCCceeecCCCccccceeeeeee-CCCcEEEEECCCeEEEEECCCCceEEEEecC-
Q psy14511        160 NQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDW-GYHDTLAVALDTSVYTWNTKTNKTQLLVEYP-  237 (488)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-  237 (488)
                                                         ......+.++.. ..+.+.+++.++-|..|+..++......... 
T Consensus       306 -----------------------------------~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~  350 (795)
T 4a2l_A          306 -----------------------------------SLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPY  350 (795)
T ss_dssp             -----------------------------------SCSSSCEEEEEECTTSCEEEEESSSCEEEECGGGGSSEEECCCTT
T ss_pred             -----------------------------------CCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCcccceEEcCCCC
Confidence                                               000011222222 2467888888889999987766544332211 


Q ss_pred             --CCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeec--------cccccEEEEEec--CCEEEEeecCCe
Q psy14511        238 --TYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLR--------THMHQVIAMCWN--GNLLSCGTIGGN  305 (488)
Q Consensus       238 --~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~--------~~~~~v~~~~~~--~~~l~~~~~dg~  305 (488)
                        +.....|.++...++|+.. ++ +.++.|..|+..+++......        .....|.++..+  ++.|..|+.++-
T Consensus       351 ~~~l~~~~V~~i~~d~~g~lW-iG-t~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~G  428 (795)
T 4a2l_A          351 KNSLSDNVVSCIVEDKDKNLW-IG-TNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGG  428 (795)
T ss_dssp             SSSCSCSSEEEEEECTTSCEE-EE-ESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTE
T ss_pred             CCCCCCCeeEEEEECCCCCEE-EE-ECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCc
Confidence              1134569999998888654 45 577789999987654432221        123568888874  454788888788


Q ss_pred             EEEEECcCCCccceeee-----cCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccc---------eeee--ee
Q psy14511        306 ILHYDVRTHSDYPTAIT-----REGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLG---------LIVP--KL  369 (488)
Q Consensus       306 i~i~d~~~~~~~~~~~~-----~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~---------~~~~--~~  369 (488)
                      |..||..++.  ...+.     .....|.++...++|++.+... +.+.+||..+........         ..+.  ..
T Consensus       429 l~~~d~~~~~--~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~  505 (795)
T 4a2l_A          429 LSILHRNSGQ--VENFNQRNSQLVNENVYAILPDGEGNLWLGTL-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFR  505 (795)
T ss_dssp             EEEEETTTCC--EEEECTTTSCCSCSCEEEEEECSSSCEEEEES-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEE
T ss_pred             eeEEeCCCCc--EEEeecCCCCcCCCeeEEEEECCCCCEEEEec-CceeEEeCCCCeEEEccccccccccCCceEEEEEE
Confidence            9999987653  22221     2345689999999888766555 568889987643211110         1122  45


Q ss_pred             cCCCCEEEEEccCCCCeEEEEeCCCcceeEEEe-------eccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcccc
Q psy14511        370 KREGRELVTSHGKQDCSLKMWEYPRLHLIEELK-------IHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRK  442 (488)
Q Consensus       370 ~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~-------~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~  442 (488)
                      .++|+..+.+   . +.+..||..+++.  .+.       .+...|.++...++|++.+... . -|..||..+++....
T Consensus       506 d~~g~lWigt---~-~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~-Gl~~~d~~~~~~~~~  577 (795)
T 4a2l_A          506 DSHKRLWIGG---E-EGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-E-GFYCFNEKDKQIKRY  577 (795)
T ss_dssp             CTTCCEEEEE---S-SCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-S-CEEEEETTTTEEEEE
T ss_pred             CCCCCEEEEe---C-CceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-C-CceeECCCCCcEEEe
Confidence            5667766652   2 4588898876654  222       1345799999999998666544 3 578888776654322


Q ss_pred             cc----ccCCcceEEeecCCCce
Q psy14511        443 AR----QVGSGSSLEFAILKQPV  461 (488)
Q Consensus       443 ~~----~~~~v~~~~~s~~~~~~  461 (488)
                      ..    ....+.++...++|...
T Consensus       578 ~~~~gl~~~~i~~i~~d~~g~lW  600 (795)
T 4a2l_A          578 NTTNGLPNNVVYGILEDSFGRLW  600 (795)
T ss_dssp             CGGGTCSCSCEEEEEECTTSCEE
T ss_pred             CCCCCCchhheEEEEECCCCCEE
Confidence            11    12345666666655543

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=99.24  E-value=2.1e-09  Score=94.45  Aligned_cols=215  Identities=10%  Similarity=0.081  Sum_probs=137.9

Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCcc
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDY  317 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~  317 (488)
                      .........|+|+++.|+.....++.|..|+.. ++ ...+..+...+..+.+  +|+++++...++.|..|+.. +. .
T Consensus        43 ~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~-~  118 (305)
T 3dr2_A           43 QATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQ-A  118 (305)
T ss_dssp             CCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SC-E
T ss_pred             CCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CC-E
Confidence            344577899999999666654788999999984 33 3444445667788888  57766665566889999985 32 2


Q ss_pred             ceeeecC----CccEEEEEEccCCcEEEE----Ee--------------cCeEEEEECCCCCCCccccee----eeeecC
Q psy14511        318 PTAITRE----GDVVCGLKWSPNGRYLAS----GS--------------NNTVKIWDFRQLDAKRPLGLI----VPKLKR  371 (488)
Q Consensus       318 ~~~~~~~----~~~i~~~~~s~~~~~l~~----~~--------------d~~i~iwd~~~~~~~~~~~~~----~~~~~~  371 (488)
                      .......    ...+..++++|+|+++++    +.              .+.|..+|..+++..... ..    -.+|+|
T Consensus       119 ~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~sp  197 (305)
T 3dr2_A          119 HLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSP  197 (305)
T ss_dssp             EEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECT
T ss_pred             EEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcC
Confidence            1111111    123567999999998886    22              145777777655433222 11    128999


Q ss_pred             CCCEEEEEccCC----CCeEEEEeCCCcceeEE---E-eeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccccc
Q psy14511        372 EGRELVTSHGKQ----DCSLKMWEYPRLHLIEE---L-KIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKA  443 (488)
Q Consensus       372 ~~~~l~~~~g~~----~~~i~i~d~~~~~~~~~---~-~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~~  443 (488)
                      |++.|+++....    .+.|++|++..+. +..   + .........+++.++|++.++. .+| |.+|+.. ++.....
T Consensus       198 dg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~-~~g-v~~~~~~-g~~~~~~  273 (305)
T 3dr2_A          198 DEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVDRGGWLWSSS-GTG-VCVFDSD-GQLLGHI  273 (305)
T ss_dssp             TSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEECTTSCEEECC-SSE-EEEECTT-SCEEEEE
T ss_pred             CCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEECCCCCEEEec-CCc-EEEECCC-CCEEEEE
Confidence            999887752211    3789999987544 211   1 1123345678999999955544 454 9999984 4444333


Q ss_pred             cccCCcceEEeecCCCceEE
Q psy14511        444 RQVGSGSSLEFAILKQPVSL  463 (488)
Q Consensus       444 ~~~~~v~~~~~s~~~~~~~~  463 (488)
                      .....+.+++|+|+++.+.+
T Consensus       274 ~~~~~~~~~~f~~d~~~L~i  293 (305)
T 3dr2_A          274 PTPGTASNCTFDQAQQRLFI  293 (305)
T ss_dssp             ECSSCCCEEEECTTSCEEEE
T ss_pred             ECCCceeEEEEeCCCCEEEE
Confidence            33446899999988876644

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=99.24  E-value=1.5e-09  Score=100.31  Aligned_cols=227  Identities=15%  Similarity=0.143  Sum_probs=151.8

Q ss_pred             CcEEEEE-CCCeEEEEECCCCceEEEEecCCCCCCceEEEEE-c-CCCCeEEEEe-----------------CCCCcEEE
Q psy14511        209 HDTLAVA-LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAW-K-PRTTDLAVTN-----------------TCTEYIDL  268 (488)
Q Consensus       209 ~~~~~~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~-~-~~~~~l~~~~-----------------~~~~~i~i  268 (488)
                      ..+++.. .++.|.+.|+.+.++..+++++  ....+..+++ + |+++++++++                 ..++.+.+
T Consensus       102 ~~lfVnd~~~~rVavIdl~t~~~~~ii~ip--~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv  179 (595)
T 1fwx_A          102 RFLFMNDKANTRVARVRCDVMKCDAILEIP--NAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA  179 (595)
T ss_dssp             EEEEEEETTTTEEEEEETTTTEEEEEEECS--SCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred             CEEEEEcCCCCEEEEEECCCceEeeEEeCC--CCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence            4455544 6778999999999998888775  3446888887 5 9999998883                 22457889


Q ss_pred             EECCcceeeeeecc-ccccEEEEEecCCEEEEeecCC--------------------------------------eEEEE
Q psy14511        269 WHEQEERLIQKLRT-HMHQVIAMCWNGNLLSCGTIGG--------------------------------------NILHY  309 (488)
Q Consensus       269 ~d~~~~~~~~~~~~-~~~~v~~~~~~~~~l~~~~~dg--------------------------------------~i~i~  309 (488)
                      .|..+.+...++.- ....-..++.+|+++++.+.+.                                      .|.+.
T Consensus       180 ID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VI  259 (595)
T 1fwx_A          180 VDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVV  259 (595)
T ss_dssp             EETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEE
T ss_pred             EECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEE
Confidence            99998877777652 1222234444677776666442                                      36677


Q ss_pred             ECcC--CCccceeeecCCccEEEEEEccCCcEEEEEe--cCeEEEEECCCCCC------------Ccc----cceeeeee
Q psy14511        310 DVRT--HSDYPTAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDA------------KRP----LGLIVPKL  369 (488)
Q Consensus       310 d~~~--~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--d~~i~iwd~~~~~~------------~~~----~~~~~~~~  369 (488)
                      |.++  +......+.... ...++.++|||+++++++  +.++.++|+.+.+.            ...    ......+|
T Consensus       260 D~~~~~~~~~~~~Ipvg~-~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF  338 (595)
T 1fwx_A          260 DGRKEASSLFTRYIPIAN-NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAF  338 (595)
T ss_dssp             ECSGGGCCSSEEEEEEES-SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEE
T ss_pred             eCcccCCceeEEEEecCC-CceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEE
Confidence            7766  322123333222 345799999999999888  39999999986521            001    11122399


Q ss_pred             cCCCCEEEEEccCCCCeEEEEeCCC----------cceeEEEeeccccE-----EEEEEcCCCCEEEEEeC---CCc---
Q psy14511        370 KREGRELVTSHGKQDCSLKMWEYPR----------LHLIEELKIHQERI-----LSAVLSPDQTCVAAASA---DET---  428 (488)
Q Consensus       370 ~~~~~~l~~~~g~~~~~i~i~d~~~----------~~~~~~~~~~~~~v-----~~~~~s~~~~~l~t~~~---dg~---  428 (488)
                      +|+| .++++ ...+++|.+||+.+          .+.+.++.-|-.+-     ..+.++|||++|+++..   |..   
T Consensus       339 ~~dG-~aY~t-~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~  416 (595)
T 1fwx_A          339 DGRG-NAYTS-LFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNV  416 (595)
T ss_dssp             CTTS-EEEEE-ETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCC
T ss_pred             CCCC-eEEEE-EecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccccccC
Confidence            9999 55554 68899999999977          56677776664432     22356899999998753   432   


Q ss_pred             -------EEEEecCCCCcc
Q psy14511        429 -------ISIWNCFPRDKK  440 (488)
Q Consensus       429 -------v~iw~~~~~~~~  440 (488)
                             -.++|+..++..
T Consensus       417 gp~~~~~~ql~dis~~~m~  435 (595)
T 1fwx_A          417 GPLKPENDQLIDISGDKMV  435 (595)
T ss_dssp             CSSCCEEEEEEECSSSSCE
T ss_pred             CCCCCCcceEEEcCCCcEE
Confidence                   288999655543

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=99.21  E-value=1.1e-09  Score=98.01  Aligned_cols=252  Identities=11%  Similarity=-0.006  Sum_probs=143.5

Q ss_pred             cCCceEEEee--cCCeEEEEEcccCcccc-----eeecccCceEEEEEEccCCcEEEEec------CCeEEEEeccccCc
Q psy14511          3 WNGNLLSCGT--IGGNILHYDVRTHSDYP-----TAITREGDVVCGLKWSPNGRYLASGS------NNTVKIWDFRQLDA   69 (488)
Q Consensus         3 ~dg~~la~g~--~dg~i~iwd~~~~~~~~-----~~~~~h~~~V~~l~~sp~g~~las~~------d~~i~vwd~~~~~~   69 (488)
                      .||+++++..  .++.+.||.+.+++..+     ....+|...+..++++|+|+++++-.      +..|.+||+.+++.
T Consensus        26 ~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~  105 (343)
T 2qe8_A           26 PDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQL  105 (343)
T ss_dssp             TTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEE
T ss_pred             CCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeE
Confidence            4788888753  23435566655433110     01123556899999999998777643      47999999987653


Q ss_pred             CCCccc---ccccccceeEEEEecCCCeEEeeeC---CcccceEEEEecCCCeeeeeeecCCCccc-cccccccccccce
Q psy14511         70 KRPQVN---NQCHLSAVKAIAWCPWEPTLLATGG---GICDQTVRLWNSMNGKEKCHVKTDSQQAN-DETISYREQKKRR  142 (488)
Q Consensus        70 ~~~~~~---~~~h~~~v~~l~~~~~~~~l~~~~~---~~~d~~i~vwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  142 (488)
                      .+.+..   ...+...+..+++++++..++++..   .  ++.|.+||+.+++..+.+..+..... ...+.+       
T Consensus       106 ~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~--~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~-------  176 (343)
T 2qe8_A          106 SRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDD--KAALIRVDLQTGLAARVLQGYPGIAPEDIDLVI-------  176 (343)
T ss_dssp             EEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGG--GCEEEEEETTTCCEEEECTTCTTTSCCSCCCEE-------
T ss_pred             EEEEECChhhcccccccceEEEecCCCEEEEEcCccCC--CCeEEEEECCCCCEEEEecCCCcccccccceeE-------
Confidence            222211   1123345789999987656666543   2  78999999988876544432100000 000000       


Q ss_pred             eEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEE
Q psy14511        143 HLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYT  222 (488)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i  222 (488)
                                                                                      .+..+.....++.+..
T Consensus       177 ----------------------------------------------------------------~g~~~~~~~~~g~~~~  192 (343)
T 2qe8_A          177 ----------------------------------------------------------------DGVPVQIGQPDGTVIR  192 (343)
T ss_dssp             ----------------------------------------------------------------TTEECBEECTTSCEEC
T ss_pred             ----------------------------------------------------------------CCEEEEeccCCCceec
Confidence                                                                            0011112223344332


Q ss_pred             EECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCc---c-----eeee--eeccccccEEEEEe
Q psy14511        223 WNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE---E-----RLIQ--KLRTHMHQVIAMCW  292 (488)
Q Consensus       223 w~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~---~-----~~~~--~~~~~~~~v~~~~~  292 (488)
                      |.                 ..+..++++|+++.|+++......+..++...   +     +...  ...++......+++
T Consensus       193 ~~-----------------~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~  255 (343)
T 2qe8_A          193 PH-----------------LGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISI  255 (343)
T ss_dssp             CC-----------------CCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEE
T ss_pred             ee-----------------cccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEE
Confidence            21                 23678999999999988833344555554321   0     0000  11122223344566


Q ss_pred             --cCCEEEEeecCCeEEEEECcCCCccceeee-cCCccEEEEEEccCCcEEEEEec
Q psy14511        293 --NGNLLSCGTIGGNILHYDVRTHSDYPTAIT-REGDVVCGLKWSPNGRYLASGSN  345 (488)
Q Consensus       293 --~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~d  345 (488)
                        +|+++++...++.|.+||..+++ ...... .+-..+.+++|.++++++++.+.
T Consensus       256 d~~G~l~va~~~~~~V~~~d~~~G~-~~~~~~~~~~~~p~~va~~~~g~l~v~~~~  310 (343)
T 2qe8_A          256 DKDHNIYVGDLAHSAIGVITSADRA-YKLLVTDEKLSWTDSFNFGSDGYLYFDCNQ  310 (343)
T ss_dssp             CTTCCEEEEEGGGTEEEEEETTTTE-EEEEEECGGGSCEEEEEECTTSCEEEEECC
T ss_pred             CCCCCEEEEccCCCeEEEEECCCCC-EEEEEECCceecCCeeEECCCCcEEEEeCc
Confidence              68888888889999999984432 222222 12345889999999988877764

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=99.20  E-value=1.4e-06  Score=87.27  Aligned_cols=372  Identities=11%  Similarity=0.045  Sum_probs=215.3

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccceeeccc-Cce-EEEEEEccCCcEEEEecCCeEEEEeccccCcCCCccccccccc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITRE-GDV-VCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLS   81 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h-~~~-V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~   81 (488)
                      +|++.+ ++. +-+..||..+++.. ....++ ... |.++...++|++.+...++.|..|+..+.+.....  ...+..
T Consensus       141 ~g~lwi-~t~-~gl~~~~~~~~~~~-~~~~~~~~~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~--~~~~~~  215 (795)
T 4a2l_A          141 PEQLLI-STP-EGLIMFDIKESKFI-DDSFSTAMHKTIASTLYRQGDQIYIGTSTDGLYTYSITQKTFEKVI--PILGTK  215 (795)
T ss_dssp             TTEEEE-EET-TEEEEEETTTTEEE-CSSSCHHHHTCCEEEEEEETTEEEEEESSSCEEEEETTTCCEEECC------CC
T ss_pred             CCCEEE-EEC-CceEEEECCCCEEE-eccCCCCCCcceEEEEECCCCCEEEEECCCCEEEEeCCCCeEEEec--CCCCCC
Confidence            455444 343 45888987665421 111111 123 88999999998777544556888987654322111  112346


Q ss_pred             ceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecc
Q psy14511         82 AVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQ  161 (488)
Q Consensus        82 ~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (488)
                      .|.++...+++...+.+.    ++-+..||..+++..........+                                  
T Consensus       216 ~i~~i~~d~~g~lwigt~----~~Gl~~~~~~~~~~~~~~~~~~~~----------------------------------  257 (795)
T 4a2l_A          216 QIQAILQQSPTRIWVATE----GAGLFLINPKTKEIKNYLHSPSNP----------------------------------  257 (795)
T ss_dssp             CEEEEEEEETTEEEEEEB----SSCEEEEETTTTEEEEECCCTTCT----------------------------------
T ss_pred             eeEEEEEcCCCCEEEEEC----CCCeEEEeCCCCeEEEeecCCCCc----------------------------------
Confidence            788998888886544443    445888998766533211100000                                  


Q ss_pred             ccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC-CCcEEEEECCCeEEEEECCCCceEEEEecC---
Q psy14511        162 SKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG-YHDTLAVALDTSVYTWNTKTNKTQLLVEYP---  237 (488)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~---  237 (488)
                                                      .......+.++..+ .+.+.+++.+ -|.+|+..+++.......+   
T Consensus       258 --------------------------------~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~  304 (795)
T 4a2l_A          258 --------------------------------KSISSNYIRSLAMDSQNRLWIGTFN-DLNIYHEGTDSFASYSSNPVEN  304 (795)
T ss_dssp             --------------------------------TSCSCSBEEEEEECTTSCEEEEESS-CEEEEETTTTEEEEECCCTTST
T ss_pred             --------------------------------cccCCCeEEEEEEcCCCCEEEEeCC-hhheEcCCCCeEEEEecCCCCC
Confidence                                            00000112223332 4678888766 6899998887765443211   


Q ss_pred             -CCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeec------cccccEEEEEec-CCEEEEeecCCeEEEE
Q psy14511        238 -TYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLR------THMHQVIAMCWN-GNLLSCGTIGGNILHY  309 (488)
Q Consensus       238 -~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~------~~~~~v~~~~~~-~~~l~~~~~dg~i~i~  309 (488)
                       ......|.++...++|... ++ +.++.|..++...........      .....|.++..| ...|..|+.++-|..|
T Consensus       305 ~~l~~~~i~~i~~D~~g~lW-ig-t~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~  382 (795)
T 4a2l_A          305 GSLSQRSVRSIFMDSQGGMW-LG-TYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLY  382 (795)
T ss_dssp             TSCSSSCEEEEEECTTSCEE-EE-ESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEE
T ss_pred             CCCCCCcEEEEEEeCCcCEE-EE-ECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEE
Confidence             1134679999999988655 45 567778889876543221111      124568888884 4567778888789999


Q ss_pred             ECcCCCccceeee--------cCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCccc-------ceeee--eecC
Q psy14511        310 DVRTHSDYPTAIT--------REGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPL-------GLIVP--KLKR  371 (488)
Q Consensus       310 d~~~~~~~~~~~~--------~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~-------~~~~~--~~~~  371 (488)
                      |..++. ......        .....|.++...++|+.|..|+ ++.+..||..+++.....       ...+.  ...+
T Consensus       383 ~~~~~~-~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~  461 (795)
T 4a2l_A          383 NPITQR-FTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDG  461 (795)
T ss_dssp             CTTTCC-EEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECS
T ss_pred             cCCCCc-EEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECC
Confidence            987643 111111        1235689999999998444555 578999998765422110       01122  3445


Q ss_pred             CCCEEEEEccCCCCeEEEEeCCCcceeEEEee------ccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcccc---
Q psy14511        372 EGRELVTSHGKQDCSLKMWEYPRLHLIEELKI------HQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRK---  442 (488)
Q Consensus       372 ~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~------~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~---  442 (488)
                      +|+..+.+   . +.+.+||..+++.......      +...|.++...++|++.+...  +-|..|+..+++. ..   
T Consensus       462 ~g~lwigt---~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~~-~~~~~  534 (795)
T 4a2l_A          462 EGNLWLGT---L-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEGLDI-QKASI  534 (795)
T ss_dssp             SSCEEEEE---S-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES--SCEEEEEEETTEE-EECCC
T ss_pred             CCCEEEEe---c-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC--CceEEEeCCCCeE-EEecC
Confidence            66665552   2 4588999887654322111      235799999999998776554  4588888876543 11   


Q ss_pred             ----ccccCCcceEEeecCCCce
Q psy14511        443 ----ARQVGSGSSLEFAILKQPV  461 (488)
Q Consensus       443 ----~~~~~~v~~~~~s~~~~~~  461 (488)
                          ......+.++...+++...
T Consensus       535 ~~~~~l~~~~i~~i~~d~~g~lW  557 (795)
T 4a2l_A          535 LPVSNVTKLFTNCIYEASNGIIW  557 (795)
T ss_dssp             SCSCGGGGSCEEEEEECTTSCEE
T ss_pred             CCCCCCCCCeeEEEEECCCCCEE
Confidence                1123456677776666644

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=99.17  E-value=1.1e-07  Score=81.68  Aligned_cols=236  Identities=8%  Similarity=-0.032  Sum_probs=145.6

Q ss_pred             CCeEEEEECCCCceE-----EEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEE
Q psy14511        217 DTSVYTWNTKTNKTQ-----LLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMC  291 (488)
Q Consensus       217 d~~v~iw~~~~~~~~-----~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~  291 (488)
                      .+.|+.+++......     ..+..   ....+..++++++++.|+.+....+.|..++...................++
T Consensus         9 ~~~I~~~~~~g~~~~~~~~~~~~~~---~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia   85 (267)
T 1npe_A            9 TGKIERLPLERNTMKKTEAKAFLHI---PAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIA   85 (267)
T ss_dssp             EEEEEEEEESSSCBCGGGCEEEEEE---EEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEE
T ss_pred             CCeEEEEEecCcccccccceeeecC---CCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEE
Confidence            457888888765421     12221   2235789999998888887756788999999876544333332224566777


Q ss_pred             ec--CCEEE-EeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-c---CeEEEEECCCCCCCccc--
Q psy14511        292 WN--GNLLS-CGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-N---NTVKIWDFRQLDAKRPL--  362 (488)
Q Consensus       292 ~~--~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d---~~i~iwd~~~~~~~~~~--  362 (488)
                      ++  +..++ +-...+.|.++++.... ..............++++|++..|..+. .   +.|..+++..... ..+  
T Consensus        86 ~d~~~~~lyv~d~~~~~I~~~~~~g~~-~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~-~~~~~  163 (267)
T 1npe_A           86 LDHLGRTIFWTDSQLDRIEVAKMDGTQ-RRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR-RILAQ  163 (267)
T ss_dssp             EETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC-EEEEC
T ss_pred             EEecCCeEEEEECCCCEEEEEEcCCCC-EEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc-EEEEE
Confidence            73  44444 44556889999987532 2222222224578999999766555444 2   5788888764321 111  


Q ss_pred             ---cee-eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEe-CCCcEEEEecCCC
Q psy14511        363 ---GLI-VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAAS-ADETISIWNCFPR  437 (488)
Q Consensus       363 ---~~~-~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~-~dg~v~iw~~~~~  437 (488)
                         ... -.++++++..|+.+ ....+.|..+|+........+.. ......++..  +..|..+. ..+.|..+|..++
T Consensus       164 ~~~~~P~gia~d~~~~~lyv~-d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g  239 (267)
T 1npe_A          164 DNLGLPNGLTFDAFSSQLCWV-DAGTHRAECLNPAQPGRRKVLEG-LQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAIS  239 (267)
T ss_dssp             TTCSCEEEEEEETTTTEEEEE-ETTTTEEEEEETTEEEEEEEEEC-CCSEEEEEEE--TTEEEEEETTTTEEEEEETTTT
T ss_pred             CCCCCCcEEEEcCCCCEEEEE-ECCCCEEEEEecCCCceEEEecC-CCCceEEEEe--CCEEEEEECCCCeEEEEeCCCC
Confidence               111 11889988877765 45678999999976544333332 2334566653  44554444 5689999999988


Q ss_pred             Ccccccccc--CCcceEEeecCCCce
Q psy14511        438 DKKRKARQV--GSGSSLEFAILKQPV  461 (488)
Q Consensus       438 ~~~~~~~~~--~~v~~~~~s~~~~~~  461 (488)
                      +........  .....+++.|++++.
T Consensus       240 ~~~~~i~~g~~~~p~gi~~~~~~~~~  265 (267)
T 1npe_A          240 KEMDTFHPHKQTRLYGITIALSQCPQ  265 (267)
T ss_dssp             EEEEEECCSSCCCCCCEEEECSCC--
T ss_pred             CceEEEccccccccceeeecCccCCC
Confidence            766443322  247889999987753

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=99.16  E-value=5.1e-08  Score=87.09  Aligned_cols=128  Identities=13%  Similarity=0.146  Sum_probs=79.0

Q ss_pred             CCCeEEEEECCCCceEEEEecCCCCCCceEEEEE--cCCCCeEEEEeC-----CCCcEEEEECCccee--eeee--ccc-
Q psy14511        216 LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAW--KPRTTDLAVTNT-----CTEYIDLWHEQEERL--IQKL--RTH-  283 (488)
Q Consensus       216 ~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~~~~~-----~~~~i~i~d~~~~~~--~~~~--~~~-  283 (488)
                      .+.+|.+||+.+++....+.... .......+.|  +|+++++++++.     .+++|.+|..+.++.  .+.+  ... 
T Consensus       226 ~~d~V~v~D~~~~k~~~tI~vg~-~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~  304 (462)
T 2ece_A          226 YGNRIHFWDLRKRKRIHSLTLGE-ENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEP  304 (462)
T ss_dssp             SCCEEEEEETTTTEEEEEEESCT-TEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEE
T ss_pred             cCCEEEEEECCCCcEeeEEecCC-CCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCcc
Confidence            47899999999988777776632 2234455655  999999999855     677887766543321  1111  100 


Q ss_pred             ---------------cccEEEEEe--cCCEEEEeec-CCeEEEEECcCCCc--cceeeecCC--------------ccEE
Q psy14511        284 ---------------MHQVIAMCW--NGNLLSCGTI-GGNILHYDVRTHSD--YPTAITREG--------------DVVC  329 (488)
Q Consensus       284 ---------------~~~v~~~~~--~~~~l~~~~~-dg~i~i~d~~~~~~--~~~~~~~~~--------------~~i~  329 (488)
                                     ......+.+  |+++|+++.. .+.|.+||+.....  ....+.-..              ....
T Consensus       305 v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr  384 (462)
T 2ece_A          305 LEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQ  384 (462)
T ss_dssp             CCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCC
T ss_pred             ccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCC
Confidence                           122344445  8888877765 58999999864322  122221110              1245


Q ss_pred             EEEEccCCcEEEEEe
Q psy14511        330 GLKWSPNGRYLASGS  344 (488)
Q Consensus       330 ~~~~s~~~~~l~~~~  344 (488)
                      .++++|||++|+++.
T Consensus       385 ~~~lSpDGk~LyVaN  399 (462)
T 2ece_A          385 MLEISRDGRRVYVTN  399 (462)
T ss_dssp             CEEECTTSSEEEEEC
T ss_pred             EEEEcCCCCEEEEEc
Confidence            678888888877775

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=99.15  E-value=6.9e-11  Score=106.55  Aligned_cols=216  Identities=11%  Similarity=0.057  Sum_probs=119.7

Q ss_pred             CCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecccccc
Q psy14511        207 GYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQ  286 (488)
Q Consensus       207 ~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~  286 (488)
                      .++.+++++.|+.|+.||..+++..-.+..     ..+.+..+.+++..++++ +.|+.|+.||..+++.+..+..+...
T Consensus         8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-----~~~~s~p~~~~g~~~v~~-s~dg~l~a~d~~tG~~~w~~~~~~~~   81 (369)
T 2hz6_A            8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-----DPVLQVPTHVEEPAFLPD-PNDGSLYTLGSKNNEGLTKLPFTIPE   81 (369)
T ss_dssp             CTTEEEEEETTSEEEEEETTTCCEEEEEEC-----CCSCCCC-----CCEEEC-TTTCCEEEC-----CCSEECSCCHHH
T ss_pred             eCCEEEEEcCCCEEEEEECCCCCEEEEecC-----CCceecceEcCCCEEEEe-CCCCEEEEEECCCCceeeeeeccCcc
Confidence            456788889999999999999998766654     233344445667677776 89999999999888776665433211


Q ss_pred             -E-EEEEe-cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCccc
Q psy14511        287 -V-IAMCW-NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPL  362 (488)
Q Consensus       287 -v-~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~  362 (488)
                       + .+... ++..+++++.++.++.||..+++. ...+..+.    ...++|++..+++++ ++.++.||.++++..-..
T Consensus        82 ~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~-~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~  156 (369)
T 2hz6_A           82 LVQASPCRSSDGILYMGKKQDIWYVIDLLTGEK-QQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNA  156 (369)
T ss_dssp             HHTTCSCC-----CCCCEEEEEEEEECCC---------------------------EEEEEEEEEEECCCSSSSSCCCEE
T ss_pred             ccccCceEecCCEEEEEeCCCEEEEEECCCCcE-EEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeE
Confidence             1 11112 456778888999999999998753 33333332    234567888888887 699999999988654433


Q ss_pred             cee---eeeecCCC---CEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEE-EEEEcCCCCEE----EEEeCCCcEEE
Q psy14511        363 GLI---VPKLKREG---RELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERIL-SAVLSPDQTCV----AAASADETISI  431 (488)
Q Consensus       363 ~~~---~~~~~~~~---~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l----~t~~~dg~v~i  431 (488)
                      ...   ...+..+.   ..+++  ++.++.++.||..+++.+.+... ..++. ...+++++...    +.+  ++.++.
T Consensus       157 ~~~~~~~~~~~~~~~~~~~v~~--~~~dg~v~a~d~~tG~~~W~~~~-~~pv~~~~~~~~dg~~~v~~~~~~--~~~l~~  231 (369)
T 2hz6_A          157 TYFDYAASLPEDDVDYKMSHFV--SNGDGLVVTVDSESGDVLWIQNY-ASPVVAFYVWQREGLRKVMHINVA--VETLRY  231 (369)
T ss_dssp             EEEEECCBCCCCCTTCCCCEEE--EETSCEEEEECTTTCCEEEEEEC-SSCEEEEEECTTSSCEEECCEEEE--HHHHHH
T ss_pred             ecccccCccccCCccccceEEE--ECCCCEEEEEECCCCcEEEEecC-CCceEEEEEecCCceEeccceeec--ccceee
Confidence            221   11333332   44555  56799999999999998887763 34443 34556666432    112  334555


Q ss_pred             EecCCCC
Q psy14511        432 WNCFPRD  438 (488)
Q Consensus       432 w~~~~~~  438 (488)
                      +|..+++
T Consensus       232 ld~~tG~  238 (369)
T 2hz6_A          232 LTFMSGE  238 (369)
T ss_dssp             HHHHHHH
T ss_pred             eehhcCC
Confidence            5555444

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=99.11  E-value=3.5e-09  Score=94.29  Aligned_cols=201  Identities=10%  Similarity=-0.023  Sum_probs=118.8

Q ss_pred             CCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccE
Q psy14511        208 YHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQV  287 (488)
Q Consensus       208 ~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v  287 (488)
                      .+.+++++.++.|..+|.. ++.......   ....+.++...+++. +.++ +.++.|..+|.. ++....+......+
T Consensus       107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~---~~~~~~~~~~~~~g~-l~vg-t~~~~l~~~d~~-g~~~~~~~~~~~~~  179 (330)
T 3hxj_A          107 EDILYVTSMDGHLYAINTD-GTEKWRFKT---KKAIYATPIVSEDGT-IYVG-SNDNYLYAINPD-GTEKWRFKTNDAIT  179 (330)
T ss_dssp             TTEEEEECTTSEEEEECTT-SCEEEEEEC---SSCCCSCCEECTTSC-EEEE-CTTSEEEEECTT-SCEEEEEECSSCCC
T ss_pred             CCEEEEEecCCEEEEEcCC-CCEEEEEcC---CCceeeeeEEcCCCE-EEEE-cCCCEEEEECCC-CCEeEEEecCCCce
Confidence            4678888889999999988 665554443   333455667777775 5556 678999999988 77666665545555


Q ss_pred             EEEEec-CCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccceee
Q psy14511        288 IAMCWN-GNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIV  366 (488)
Q Consensus       288 ~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~  366 (488)
                      .++..+ +..+..++  +.+..+| .++. ...........+.++...++|.+.+...++.+..+|.             
T Consensus       180 ~~~~~d~~g~l~v~t--~~l~~~d-~~g~-~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~-------------  242 (330)
T 3hxj_A          180 SAASIGKDGTIYFGS--DKVYAIN-PDGT-EKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINP-------------  242 (330)
T ss_dssp             SCCEECTTCCEEEES--SSEEEEC-TTSC-EEEEECCSSCCCSCCEECTTSCEEEEETTTEEEEECT-------------
T ss_pred             eeeEEcCCCEEEEEe--CEEEEEC-CCCc-EEEEEccCCcceeceEECCCCeEEEEcCCCeEEEECC-------------
Confidence            666662 34455555  7788888 4433 2333333334466677777776555444455555542             


Q ss_pred             eeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccccc-cc
Q psy14511        367 PKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKA-RQ  445 (488)
Q Consensus       367 ~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~~-~~  445 (488)
                                                 +++.+..+......+..+...+++ .|..++.+|.|..+|. +++..... ..
T Consensus       243 ---------------------------~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~~~~~~~~~  293 (330)
T 3hxj_A          243 ---------------------------DGTEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP-DGTEKWNFETG  293 (330)
T ss_dssp             ---------------------------TSCEEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEECT-TSCEEEEEECS
T ss_pred             ---------------------------CCCEeEEeeCCCCccccceEcCCC-eEEEecCCCCEEEECC-CCcEEEEEEcC
Confidence                                       122222222222222334444455 5667778888999985 55544322 22


Q ss_pred             cCCcceEEeecCCCce
Q psy14511        446 VGSGSSLEFAILKQPV  461 (488)
Q Consensus       446 ~~~v~~~~~s~~~~~~  461 (488)
                      ...+.++...+++..+
T Consensus       294 ~~~~~~~~~d~~g~l~  309 (330)
T 3hxj_A          294 SWIIATPVIDENGTIY  309 (330)
T ss_dssp             SCCCSCCEECTTCCEE
T ss_pred             CccccceEEcCCCEEE
Confidence            3345566665665543

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=99.10  E-value=1.7e-11  Score=110.58  Aligned_cols=198  Identities=11%  Similarity=0.051  Sum_probs=110.8

Q ss_pred             CCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCc-cE
Q psy14511        252 RTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGD-VV  328 (488)
Q Consensus       252 ~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-~i  328 (488)
                      ++..++++ +.|+.|+.||..+++.+..+..  ..+.+..+  ++..+++++.||.|+.||..+++. ......+.. .+
T Consensus         8 ~~~~v~~g-s~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~-~w~~~~~~~~~~   83 (369)
T 2hz6_A            8 PETLLFVS-TLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEG-LTKLPFTIPELV   83 (369)
T ss_dssp             CTTEEEEE-ETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CC-SEECSCCHHHHH
T ss_pred             eCCEEEEE-cCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCce-eeeeeccCcccc
Confidence            46688888 8999999999999998888765  33322222  567888888999999999987653 222221110 01


Q ss_pred             E-EEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceee-eeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeecc
Q psy14511        329 C-GLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIV-PKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQ  405 (488)
Q Consensus       329 ~-~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~  405 (488)
                      . ...+. ++..+++++ ++.++.||.++++....+.... ..++|++..+++  ++.++.|+.||.++++.+..+..+.
T Consensus        84 ~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~~~~~p~~~~v~~--~~~dg~v~a~d~~tG~~~W~~~~~~  160 (369)
T 2hz6_A           84 QASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFADSLSPSTSLLYL--GRTEYTITMYDTKTRELRWNATYFD  160 (369)
T ss_dssp             TTCSCC------CCCCEEEEEEEEECCC----------------------EEE--EEEEEEEECCCSSSSSCCCEEEEEE
T ss_pred             ccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCCcccccccCCEEEE--EecCCEEEEEECCCCCEEEeEeccc
Confidence            0 01111 334566666 6999999999887654443322 256678888887  6778999999999999877665332


Q ss_pred             ccEEEEEEcCCC---CEEEEEeCCCcEEEEecCCCCccccccccCCcce-EEeecCC
Q psy14511        406 ERILSAVLSPDQ---TCVAAASADETISIWNCFPRDKKRKARQVGSGSS-LEFAILK  458 (488)
Q Consensus       406 ~~v~~~~~s~~~---~~l~t~~~dg~v~iw~~~~~~~~~~~~~~~~v~~-~~~s~~~  458 (488)
                        ....+++++.   ..+++++.||.|+.||..+++.+.......++.. ..+++++
T Consensus       161 --~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~pv~~~~~~~~dg  215 (369)
T 2hz6_A          161 --YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASPVVAFYVWQREG  215 (369)
T ss_dssp             --ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSSCEEEEEECTTSS
T ss_pred             --ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCCCceEEEEEecCCc
Confidence              2233344432   5677888999999999999987754444444432 3344444

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=99.09  E-value=1.6e-07  Score=91.52  Aligned_cols=239  Identities=12%  Similarity=0.053  Sum_probs=136.8

Q ss_pred             CCeEEEEECCCCceEEEEecCCCCC----------------------------CceEEEEEcCCCCeEEEEeCCCC----
Q psy14511        217 DTSVYTWNTKTNKTQLLVEYPTYDN----------------------------AYISCVAWKPRTTDLAVTNTCTE----  264 (488)
Q Consensus       217 d~~v~iw~~~~~~~~~~~~~~~~~~----------------------------~~i~~~~~~~~~~~l~~~~~~~~----  264 (488)
                      ++.|+.+|..+++.+-.+.......                            .....+++.|+...++++ +.++    
T Consensus       177 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~-~~~g~~w~  255 (668)
T 1kv9_A          177 RGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVG-TGNGSPWN  255 (668)
T ss_dssp             BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEE-CCCEESSC
T ss_pred             CCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEe-CCCCCccc
Confidence            5889999999999876665321000                            011246888888888888 6665    


Q ss_pred             ---------------cEEEEECCcceeeeeecc--cc-------ccE--EEEEecCC---EEEEeecCCeEEEEECcCCC
Q psy14511        265 ---------------YIDLWHEQEERLIQKLRT--HM-------HQV--IAMCWNGN---LLSCGTIGGNILHYDVRTHS  315 (488)
Q Consensus       265 ---------------~i~i~d~~~~~~~~~~~~--~~-------~~v--~~~~~~~~---~l~~~~~dg~i~i~d~~~~~  315 (488)
                                     .|..+|.++++.+..++.  |.       .+.  ..+.++++   .++.++.+|.++++|..+++
T Consensus       256 ~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~  335 (668)
T 1kv9_A          256 REVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGK  335 (668)
T ss_dssp             HHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred             cCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCC
Confidence                           399999999998877754  21       222  23445665   68899999999999999875


Q ss_pred             ccceeeecCC------------ccE------------------------EEEEEccCCcEEEEEecCeEEEEECCCCCCC
Q psy14511        316 DYPTAITREG------------DVV------------------------CGLKWSPNGRYLASGSNNTVKIWDFRQLDAK  359 (488)
Q Consensus       316 ~~~~~~~~~~------------~~i------------------------~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~  359 (488)
                      .. .......            .++                        ..++++|+...+..........+........
T Consensus       336 ~l-~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~  414 (668)
T 1kv9_A          336 LI-SAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFV  414 (668)
T ss_dssp             EE-EEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCC
T ss_pred             Ee-ccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccc
Confidence            32 1111100            000                        0145666655555443211111111100000


Q ss_pred             cccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCc
Q psy14511        360 RPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDK  439 (488)
Q Consensus       360 ~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~  439 (488)
                      .. ..........+...+- ....++.|..||+.+++.+.+...+ .+.....+...+.++++++.||.++.||..+++.
T Consensus       415 ~~-~~~~~g~~~~~~~~~p-~~~~~g~l~A~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~  491 (668)
T 1kv9_A          415 TR-KAFNTAAGFADATDVP-AAVVSGALLAWDPVKQKAAWKVPYP-THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEA  491 (668)
T ss_dssp             CC-SSCCCSSCGGGCCCCC-GGGCEEEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred             cc-cccccCccccccCCCC-CCCccceEEEEeCCCCcEEEEccCC-CCCcCceeEeCCCEEEEECCcccchhhhhhcChh
Confidence            00 0000000000000000 1234688999999999988777643 3334444556788999999999999999999998


Q ss_pred             cccccccCCc--ceEEeecCCCc
Q psy14511        440 KRKARQVGSG--SSLEFAILKQP  460 (488)
Q Consensus       440 ~~~~~~~~~v--~~~~~s~~~~~  460 (488)
                      +........+  .-+.+..+|+.
T Consensus       492 l~~~~~~~~~~~~p~~~~~~G~~  514 (668)
T 1kv9_A          492 LWQFEAQSGIVAAPMTFELAGRQ  514 (668)
T ss_dssp             EEEEECSSCCCSCCEEEEETTEE
T ss_pred             heEecCCCCcccCceEEEECCEE
Confidence            7443333322  23444455654

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=99.07  E-value=7.4e-06  Score=81.88  Aligned_cols=381  Identities=12%  Similarity=0.016  Sum_probs=212.3

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccceeec-------ccCceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCcccc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYPTAIT-------REGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNN   76 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~-------~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~   76 (488)
                      +|++.+ |+.++-+..||..+++.. ....       -....|.++...++|++.+...+ -+.+||..+.+........
T Consensus       173 ~g~lwi-gt~~~Gl~~~~~~~~~~~-~~~~~~~~~~~l~~~~i~~i~~d~~g~lwigt~~-Gl~~~d~~~~~~~~~~~~~  249 (781)
T 3v9f_A          173 DGKLYI-GHVEGGLSILSLNDKSVK-HFVHDPQNPNSLPGNDVRCIYKDTNGNIWIGTSK-GLALFNANTETFTNFHNNP  249 (781)
T ss_dssp             TTEEEE-EETTTEEEEEETTTTEEE-EECC--------CCSSEEEEEECTTCCEEEEETT-EEEEEETTTTEEEC-----
T ss_pred             CCCEEE-EecCCCeEEEcCCCCceE-eeecCCCCcccCCCCceeEEEEcCCCCEEEEeCC-cHheECCCCCcEEEEEcCC
Confidence            344443 555545888887765421 1110       11346999999999987765545 6889997653321111000


Q ss_pred             ----cccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeee
Q psy14511         77 ----QCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFE  152 (488)
Q Consensus        77 ----~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (488)
                          .-....|.++...++|...+.+ .   .+-|.+++..++............     +. ..               
T Consensus       250 ~~~~~l~~~~i~~i~~d~~g~lWigt-~---~~Gl~~~~~~~~~~~~~~~~~f~~-----~~-~~---------------  304 (781)
T 3v9f_A          250 GNIHGALSSYIFSIKQLKDNKLWIAT-E---LNGIMILDLQQNQFLLPEQIRFEF-----IR-EG---------------  304 (781)
T ss_dssp             ------CCCCEEEEEECTTSEEEEEE-S---SSCEEEEETTCC---------CEE-----EC-BC---------------
T ss_pred             CccccccCceEEEEEECCCCCEEEEe-C---CCCeEEECCCCCeeeeeecccccc-----cc-CC---------------
Confidence                0123569999988888544433 2   367888887665432111000000     00 00               


Q ss_pred             ccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeee-CCCcEEEEECCCeEEEEECCCCceE
Q psy14511        153 IDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDW-GYHDTLAVALDTSVYTWNTKTNKTQ  231 (488)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~v~iw~~~~~~~~  231 (488)
                                                            ..........+.++.. ..+.+.+++.++-|..++..+....
T Consensus       305 --------------------------------------~~~~~l~~~~v~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~  346 (781)
T 3v9f_A          305 --------------------------------------DNNYSLSNASARYIFQDSFNNIWIGTWGGGINFISNAPPTFH  346 (781)
T ss_dssp             --------------------------------------SSTTSBSSSCEEEEEECSSCCEEEEEBSSCEEEECSSCCSCE
T ss_pred             --------------------------------------CCCCCCCCCeEEEEEEeCCCCEEEEecCCeEEEeCCCCCcce
Confidence                                                  0000000111222222 2467888888888999998876654


Q ss_pred             EEEec------CCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeee---ccccccEEEEEec-CCEEEEee
Q psy14511        232 LLVEY------PTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKL---RTHMHQVIAMCWN-GNLLSCGT  301 (488)
Q Consensus       232 ~~~~~------~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~---~~~~~~v~~~~~~-~~~l~~~~  301 (488)
                      .....      .......|.++...++++.. ++ +.++.|..|+..++......   ......|.++..+ ...|..|+
T Consensus       347 ~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lW-ig-t~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt  424 (781)
T 3v9f_A          347 TWSYSPTQMNESSLSNKVVSSVCDDGQGKLW-IG-TDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGT  424 (781)
T ss_dssp             EEC----CCCSSCCSSSCEEEEEECTTSCEE-EE-EBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEEEE
T ss_pred             eeccCccccccCCCCCcceEEEEEcCCCCEE-EE-eCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEEEe
Confidence            43211      11134569999998887644 45 55667889998765432211   1234678888884 45666788


Q ss_pred             cCCeEEEEECcCCCccceeee---cCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCccc--------ceeee--e
Q psy14511        302 IGGNILHYDVRTHSDYPTAIT---REGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPL--------GLIVP--K  368 (488)
Q Consensus       302 ~dg~i~i~d~~~~~~~~~~~~---~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~--------~~~~~--~  368 (488)
                      .++-+..+|..+++  ...+.   .....|.++...++|++.+... +.+..||..+.+.....        ...+.  .
T Consensus       425 ~~~Gl~~~~~~~~~--~~~~~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~  501 (781)
T 3v9f_A          425 YLGNISYYNTRLKK--FQIIELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIA  501 (781)
T ss_dssp             TTEEEEEECSSSCE--EEECCSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEE
T ss_pred             ccCCEEEEcCCCCc--EEEeccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEE
Confidence            77779999887642  12221   2345689999988887666544 67889998765432111        11122  4


Q ss_pred             ecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEee----ccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcccccc
Q psy14511        369 LKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKI----HQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKAR  444 (488)
Q Consensus       369 ~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~~~  444 (488)
                      ..++|+..+.   ..++.+..+|..+++.. .+..    ....|.++...++|.+.++.. +|.|..||..+++......
T Consensus       502 ~d~~g~lWig---t~~~Gl~~~~~~~~~~~-~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d~~~~~~~~~~~  576 (781)
T 3v9f_A          502 QDSEGRFWIG---TFGGGVGIYTPDMQLVR-KFNQYEGFCSNTINQIYRSSKGQMWLATG-EGLVCFPSARNFDYQVFQR  576 (781)
T ss_dssp             ECTTCCEEEE---ESSSCEEEECTTCCEEE-EECTTTTCSCSCEEEEEECTTSCEEEEET-TEEEEESCTTTCCCEEECG
T ss_pred             EcCCCCEEEE---EcCCCEEEEeCCCCeEE-EccCCCCCCCCeeEEEEECCCCCEEEEEC-CCceEEECCCCCcEEEccc
Confidence            5566776665   33344888888765433 2321    235689999988888666554 6755888887665432211


Q ss_pred             ----ccCCcceEEeecCCCc
Q psy14511        445 ----QVGSGSSLEFAILKQP  460 (488)
Q Consensus       445 ----~~~~v~~~~~s~~~~~  460 (488)
                          ....+.++...++|..
T Consensus       577 ~~gl~~~~i~~i~~d~~g~l  596 (781)
T 3v9f_A          577 KEGLPNTHIRAISEDKNGNI  596 (781)
T ss_dssp             GGTCSCCCCCEEEECSSSCE
T ss_pred             cCCCCCceEEEEEECCCCCE
Confidence                1224556665555543

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=99.07  E-value=2.5e-08  Score=92.32  Aligned_cols=252  Identities=12%  Similarity=0.057  Sum_probs=165.5

Q ss_pred             EEEEECCCeEEEEECCCCceEEEEecCC------------------------------------CCCCceEEEEEcC---
Q psy14511        211 TLAVALDTSVYTWNTKTNKTQLLVEYPT------------------------------------YDNAYISCVAWKP---  251 (488)
Q Consensus       211 ~~~~~~d~~v~iw~~~~~~~~~~~~~~~------------------------------------~~~~~i~~~~~~~---  251 (488)
                      +.+++..|.++++-+.+++....+..-.                                    ...+.......|.   
T Consensus        18 f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t~g   97 (595)
T 1fwx_A           18 FWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTEG   97 (595)
T ss_dssp             EECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEETT
T ss_pred             EeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCCCC
Confidence            5667789999999999888766543210                                    0112223355555   


Q ss_pred             --CCCeEEEEeCCCCcEEEEECCcceeeeeeccc-cccEEEEEe----cCCEEEEee------------------cCCeE
Q psy14511        252 --RTTDLAVTNTCTEYIDLWHEQEERLIQKLRTH-MHQVIAMCW----NGNLLSCGT------------------IGGNI  306 (488)
Q Consensus       252 --~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~-~~~v~~~~~----~~~~l~~~~------------------~dg~i  306 (488)
                        ||+++++....+..|.+.|+.+.++...+.-. ......+++    +++++++++                  .++.+
T Consensus        98 ~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~v  177 (595)
T 1fwx_A           98 KYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVF  177 (595)
T ss_dssp             EEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEE
T ss_pred             CcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceE
Confidence              88999998667788999999999887744321 233555553    688888874                  34578


Q ss_pred             EEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEec-C--------------------------------------e
Q psy14511        307 LHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN-N--------------------------------------T  347 (488)
Q Consensus       307 ~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d-~--------------------------------------~  347 (488)
                      .+.|..+.+ ....+.-.. ....++++|+|+++++++. .                                      .
T Consensus       178 tvID~~t~~-v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~  255 (595)
T 1fwx_A          178 TAVDADKWE-VAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNG  255 (595)
T ss_dssp             EEEETTTTE-EEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETT
T ss_pred             EEEECCCCe-EEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECc
Confidence            999998754 333332211 2356889999999988872 1                                      3


Q ss_pred             EEEEECCC--CCC-Cccccee----eeeecCCCCEEEEEccCCCCeEEEEeCCCcc------------eeEEEeeccccE
Q psy14511        348 VKIWDFRQ--LDA-KRPLGLI----VPKLKREGRELVTSHGKQDCSLKMWEYPRLH------------LIEELKIHQERI  408 (488)
Q Consensus       348 i~iwd~~~--~~~-~~~~~~~----~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~------------~~~~~~~~~~~v  408 (488)
                      +.+.|.++  ... ...+...    ...++|||++++++ +..+.+|.++|+.+.+            .+.++. -....
T Consensus       256 V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~-~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP  333 (595)
T 1fwx_A          256 VKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVA-GKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGP  333 (595)
T ss_dssp             EEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEE-CTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCE
T ss_pred             EEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEe-CCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCc
Confidence            67777776  221 1112111    12999999999987 6778999999998653            233333 22457


Q ss_pred             EEEEEcCCCCEEEEEeCCCcEEEEecCC----------CCccccc------cccCCcceEEeecCCCceEEEEe
Q psy14511        409 LSAVLSPDQTCVAAASADETISIWNCFP----------RDKKRKA------RQVGSGSSLEFAILKQPVSLTAL  466 (488)
Q Consensus       409 ~~~~~s~~~~~l~t~~~dg~v~iw~~~~----------~~~~~~~------~~~~~v~~~~~s~~~~~~~~~~~  466 (488)
                      ..++|+|||...++.-.|+.|.+||++.          .+.+...      +|........++|||+.+.....
T Consensus       334 ~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk  407 (595)
T 1fwx_A          334 LHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK  407 (595)
T ss_dssp             EEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred             ceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCC
Confidence            8999999995555677899999999987          2222221      22222345567899998866543

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=99.04  E-value=3.9e-07  Score=86.85  Aligned_cols=246  Identities=13%  Similarity=0.013  Sum_probs=141.9

Q ss_pred             CcEEEEEC------CCeEEEEECCCCceEEEEecCCCCC-----------------------------------C-ceEE
Q psy14511        209 HDTLAVAL------DTSVYTWNTKTNKTQLLVEYPTYDN-----------------------------------A-YISC  246 (488)
Q Consensus       209 ~~~~~~~~------d~~v~iw~~~~~~~~~~~~~~~~~~-----------------------------------~-~i~~  246 (488)
                      +.+++++.      ++.|+.+|..+++.+-.+.... ..                                   . ....
T Consensus       161 g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~-~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~  239 (571)
T 2ad6_A          161 DTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATG-SDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGW  239 (571)
T ss_dssp             TEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSS-CHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSC
T ss_pred             CEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCC-CccccccCcccccccccccccccccccCcccceecCCCCeeee
Confidence            45555554      7899999999998876655432 10                                   0 0023


Q ss_pred             EEEcCCCCeEEEEeCCC----------------CcEEEEECCcceeeeeeccc----------cccEE-EEEecCC---E
Q psy14511        247 VAWKPRTTDLAVTNTCT----------------EYIDLWHEQEERLIQKLRTH----------MHQVI-AMCWNGN---L  296 (488)
Q Consensus       247 ~~~~~~~~~l~~~~~~~----------------~~i~i~d~~~~~~~~~~~~~----------~~~v~-~~~~~~~---~  296 (488)
                      +++.++...++++ ..+                +.|..+|.++++.+..++..          ..++. ....+|+   .
T Consensus       240 ~a~d~~~g~vy~~-~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~  318 (571)
T 2ad6_A          240 YAYDPKLNLFYYG-SGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPL  318 (571)
T ss_dssp             CEEETTTTEEEEE-CCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEE
T ss_pred             EEEcCCCCeEEEE-CCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEE
Confidence            5677777777777 432                35999999999888776532          12222 2223563   6


Q ss_pred             EEEeecCCeEEEEECcCCCccceeeecC------------CccE--------------------------EEEEEccCCc
Q psy14511        297 LSCGTIGGNILHYDVRTHSDYPTAITRE------------GDVV--------------------------CGLKWSPNGR  338 (488)
Q Consensus       297 l~~~~~dg~i~i~d~~~~~~~~~~~~~~------------~~~i--------------------------~~~~~s~~~~  338 (488)
                      ++.++.+|.++++|..+++.........            ..++                          ..++++|+..
T Consensus       319 v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g  398 (571)
T 2ad6_A          319 LSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESR  398 (571)
T ss_dssp             EEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTT
T ss_pred             EEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCC
Confidence            7788999999999998875322211111            0111                          2357888877


Q ss_pred             EEEEEec-CeEEEEECCCCCCCcccce-e--eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEc
Q psy14511        339 YLASGSN-NTVKIWDFRQLDAKRPLGL-I--VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLS  414 (488)
Q Consensus       339 ~l~~~~d-~~i~iwd~~~~~~~~~~~~-~--~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s  414 (488)
                      ++++... ....++............. .  ....+|.+.   .  ...++.|..||+.+++.+.++... ..+....+.
T Consensus       399 ~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~---~--~~~~g~l~a~D~~tG~~~W~~~~~-~~~~~~~~~  472 (571)
T 2ad6_A          399 TLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGP---T--KKEMGQIRAFDLTTGKAKWTKWEK-FAAWGGTLY  472 (571)
T ss_dssp             EEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTST---T--SCCCEEEEEECTTTCCEEEEEEES-SCCCSBCEE
T ss_pred             EEEEEchhccccccccccccccCCccccccceeccCcccc---C--CCCCCeEEEEECCCCCEEEEecCC-CCccceeEE
Confidence            7777763 3333443322100000000 0  000111110   0  024688999999999988777533 233333333


Q ss_pred             CCCCEEEEEeCCCcEEEEecCCCCccccccccCCc--ceEEeecCCCceE
Q psy14511        415 PDQTCVAAASADETISIWNCFPRDKKRKARQVGSG--SSLEFAILKQPVS  462 (488)
Q Consensus       415 ~~~~~l~t~~~dg~v~iw~~~~~~~~~~~~~~~~v--~~~~~s~~~~~~~  462 (488)
                      ..+..++.++.||.|+.+|..+++.+........+  .-+.+..+++.+.
T Consensus       473 t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv  522 (571)
T 2ad6_A          473 TKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYI  522 (571)
T ss_dssp             ETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred             ECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEE
Confidence            45677888999999999999999988544333332  2344556666543

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=99.01  E-value=1.4e-05  Score=79.97  Aligned_cols=376  Identities=9%  Similarity=-0.046  Sum_probs=208.9

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccceeec---c---cCceEEEEEEcc--CCcEEEEecCCeEEEEeccccCcCCCccc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYPTAIT---R---EGDVVCGLKWSP--NGRYLASGSNNTVKIWDFRQLDAKRPQVN   75 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~---~---h~~~V~~l~~sp--~g~~las~~d~~i~vwd~~~~~~~~~~~~   75 (488)
                      +|+.|-.|+.++-+..||..+.+-......   .   ....|.++...+  +|++.+...++.|..+|..+.+.. .+..
T Consensus        76 ~g~~lWigt~~~Gl~~~d~~~~~f~~~~~~~~~~~~l~~~~i~~i~~d~~~~g~lwi~t~~~gl~~~~~~~~~~~-~~~~  154 (781)
T 3v9f_A           76 VQPVIWIATQRAGLNAYNYETQSFSVYQYNPEDPQSLITNDVTHITSSVQAGKGLWVCTYYRGIEYLDIATGKFT-HYNK  154 (781)
T ss_dssp             SSSEEEEEESSSCEEEEETTTTEEEEECCCTTCSSSCSCSCEEEEEECSSTTSEEEEEESSSCEEEEETTTTEEE-EEST
T ss_pred             CCCEEEEEeCCCCcceECCCCCeEEeeccccCCCCCcccCcceEEEecCccCCCEEEEECCCCeeEEECCCCeEE-eecc
Confidence            354244566664689999876552211001   1   123689998888  787666443666888887653211 1100


Q ss_pred             --cc-ccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeee
Q psy14511         76 --NQ-CHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFE  152 (488)
Q Consensus        76 --~~-~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (488)
                        .. -....|.++...+++... +...   ++-+..+|..+++..........+ .                       
T Consensus       155 ~~~~~l~~~~i~~i~~d~~g~lw-igt~---~~Gl~~~~~~~~~~~~~~~~~~~~-~-----------------------  206 (781)
T 3v9f_A          155 STVPALPSEQTWTATEAEDGKLY-IGHV---EGGLSILSLNDKSVKHFVHDPQNP-N-----------------------  206 (781)
T ss_dssp             TTCTTCSCCCEEEEEEEETTEEE-EEET---TTEEEEEETTTTEEEEECC------------------------------
T ss_pred             CcccCCCccceEEEEECCCCCEE-EEec---CCCeEEEcCCCCceEeeecCCCCc-c-----------------------
Confidence              00 123468888888777544 4433   546888987766532211000000 0                       


Q ss_pred             ccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeee-CCCcEEEEECCCeEEEEECCCCceE
Q psy14511        153 IDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDW-GYHDTLAVALDTSVYTWNTKTNKTQ  231 (488)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~v~iw~~~~~~~~  231 (488)
                                                                ......+..+.. ..+.+.+++.+ -+.+||..+++..
T Consensus       207 ------------------------------------------~l~~~~i~~i~~d~~g~lwigt~~-Gl~~~d~~~~~~~  243 (781)
T 3v9f_A          207 ------------------------------------------SLPGNDVRCIYKDTNGNIWIGTSK-GLALFNANTETFT  243 (781)
T ss_dssp             --------------------------------------------CCSSEEEEEECTTCCEEEEETT-EEEEEETTTTEEE
T ss_pred             ------------------------------------------cCCCCceeEEEEcCCCCEEEEeCC-cHheECCCCCcEE
Confidence                                                      000001112222 24568888766 7999998877654


Q ss_pred             EEEecC----CCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeec--------------cccccEEEEEec
Q psy14511        232 LLVEYP----TYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLR--------------THMHQVIAMCWN  293 (488)
Q Consensus       232 ~~~~~~----~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~--------------~~~~~v~~~~~~  293 (488)
                      ......    ......|.++...++|... ++ +..+.|.++|..+.+......              .....|.++..|
T Consensus       244 ~~~~~~~~~~~l~~~~i~~i~~d~~g~lW-ig-t~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D  321 (781)
T 3v9f_A          244 NFHNNPGNIHGALSSYIFSIKQLKDNKLW-IA-TELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQD  321 (781)
T ss_dssp             C-----------CCCCEEEEEECTTSEEE-EE-ESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEEC
T ss_pred             EEEcCCCccccccCceEEEEEECCCCCEE-EE-eCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEe
Confidence            332211    1135679999998888544 45 454668889987654322111              134578888884


Q ss_pred             -CCEEEEeecCCeEEEEECcCCCccceeee----------cCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcc-
Q psy14511        294 -GNLLSCGTIGGNILHYDVRTHSDYPTAIT----------REGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRP-  361 (488)
Q Consensus       294 -~~~l~~~~~dg~i~i~d~~~~~~~~~~~~----------~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~-  361 (488)
                       ...|..|+.++-|..++.....  ...+.          .....|.++...++|.+.+...++.+..||..+...... 
T Consensus       322 ~~g~lWigt~~~Gl~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~  399 (781)
T 3v9f_A          322 SFNNIWIGTWGGGINFISNAPPT--FHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNK  399 (781)
T ss_dssp             SSCCEEEEEBSSCEEEECSSCCS--CEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC-
T ss_pred             CCCCEEEEecCCeEEEeCCCCCc--ceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEcc
Confidence             4467778877778999877542  11111          123568999998888766554457788888765422111 


Q ss_pred             ----c-ceeee--eecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEe---eccccEEEEEEcCCCCEEEEEeCCCcEEE
Q psy14511        362 ----L-GLIVP--KLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELK---IHQERILSAVLSPDQTCVAAASADETISI  431 (488)
Q Consensus       362 ----~-~~~~~--~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~t~~~dg~v~i  431 (488)
                          + ...+.  ...++|...+.   ..++.+..+|..+++.. .+.   .....|.++...+++++.+. +. +-|..
T Consensus       400 ~~~~~~~~~v~~i~~d~~g~lWig---t~~~Gl~~~~~~~~~~~-~~~~~~~~~~~v~~i~~d~~g~lwig-t~-~Gl~~  473 (781)
T 3v9f_A          400 ENRELLSNSVLCSLKDSEGNLWFG---TYLGNISYYNTRLKKFQ-IIELEKNELLDVRVFYEDKNKKIWIG-TH-AGVFV  473 (781)
T ss_dssp             ----CCCSBEEEEEECTTSCEEEE---ETTEEEEEECSSSCEEE-ECCSTTTCCCCEEEEEECTTSEEEEE-ET-TEEEE
T ss_pred             CCCCCCCcceEEEEECCCCCEEEE---eccCCEEEEcCCCCcEE-EeccCCCCCCeEEEEEECCCCCEEEE-EC-CceEE
Confidence                0 01122  33445555543   45567899998776543 222   13457999998888876554 44 45888


Q ss_pred             EecCCCCccccccc------cCCcceEEeecCCCce
Q psy14511        432 WNCFPRDKKRKARQ------VGSGSSLEFAILKQPV  461 (488)
Q Consensus       432 w~~~~~~~~~~~~~------~~~v~~~~~s~~~~~~  461 (488)
                      ++..+++.......      ...+.++...+++...
T Consensus       474 ~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lW  509 (781)
T 3v9f_A          474 IDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFW  509 (781)
T ss_dssp             EESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEE
T ss_pred             EeCCCCeEEecccCcccccccceeEEEEEcCCCCEE
Confidence            99887654422111      2456677666665544

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=99.00  E-value=3.8e-07  Score=76.42  Aligned_cols=194  Identities=11%  Similarity=0.022  Sum_probs=128.0

Q ss_pred             eeeeeeCC-CcEEEEEC---CCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCccee
Q psy14511        201 TSGLDWGY-HDTLAVAL---DTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERL  276 (488)
Q Consensus       201 ~~~~~~~~-~~~~~~~~---d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~  276 (488)
                      ...+.+++ +.++.++.   ++.|.++|+.+++....+.+..  ......+++.  ++.++.+.-.++.+.++|..+.+.
T Consensus        23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~--~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v   98 (266)
T 2iwa_A           23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDD--SYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSN   98 (266)
T ss_dssp             EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCT--TCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEE
T ss_pred             cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCC--CcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcE
Confidence            34566666 66776653   5899999999999888877643  2223345554  556766657899999999999988


Q ss_pred             eeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCccceeee-c-CC---ccEEEEEEccCCcEEEEEecCeEEEE
Q psy14511        277 IQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAIT-R-EG---DVVCGLKWSPNGRYLASGSNNTVKIW  351 (488)
Q Consensus       277 ~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~-~~---~~i~~~~~s~~~~~l~~~~d~~i~iw  351 (488)
                      +.++......-..+++|++.++++..++.|.++|..+.+. ...+. + ..   ..++.+.|. +|+..+..        
T Consensus        99 ~~~i~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v-~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~--------  168 (266)
T 2iwa_A           99 IKNFTHQMKDGWGLATDGKILYGSDGTSILYEIDPHTFKL-IKKHNVKYNGHRVIRLNELEYI-NGEVWANI--------  168 (266)
T ss_dssp             EEEEECCSSSCCEEEECSSSEEEECSSSEEEEECTTTCCE-EEEEECEETTEECCCEEEEEEE-TTEEEEEE--------
T ss_pred             EEEEECCCCCeEEEEECCCEEEEECCCCeEEEEECCCCcE-EEEEEECCCCcccccceeEEEE-CCEEEEec--------
Confidence            8888533123356888887777777789999999987643 22222 1 11   124566666 55433322        


Q ss_pred             ECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeec-------------cccEEEEEEcCCCC
Q psy14511        352 DFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIH-------------QERILSAVLSPDQT  418 (488)
Q Consensus       352 d~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~-------------~~~v~~~~~s~~~~  418 (488)
                                                    ..++.|.+.|.++++.+..+.-.             ....+.++|+|+++
T Consensus       169 ------------------------------~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~  218 (266)
T 2iwa_A          169 ------------------------------WQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENK  218 (266)
T ss_dssp             ------------------------------TTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTT
T ss_pred             ------------------------------CCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCC
Confidence                                          22445555566666666655421             13568999999986


Q ss_pred             E-EEEEeCCCcEEEEecCCCC
Q psy14511        419 C-VAAASADETISIWNCFPRD  438 (488)
Q Consensus       419 ~-l~t~~~dg~v~iw~~~~~~  438 (488)
                      . ++|+...+.|+..++.+..
T Consensus       219 ~lfVTgk~~~~v~~i~l~~~~  239 (266)
T 2iwa_A          219 RIFVTGKLWPKLFEIKLHLVR  239 (266)
T ss_dssp             EEEEEETTCSEEEEEEEEECC
T ss_pred             EEEEECCCCCeEEEEEEeccc
Confidence            5 5556678899999987654

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=98.98  E-value=4.5e-06  Score=79.48  Aligned_cols=238  Identities=12%  Similarity=0.025  Sum_probs=137.2

Q ss_pred             CCeEEEEECCCCceEEEEecCCCCCC------------c-----------------------e-EEEEEcCCCCeEEEEe
Q psy14511        217 DTSVYTWNTKTNKTQLLVEYPTYDNA------------Y-----------------------I-SCVAWKPRTTDLAVTN  260 (488)
Q Consensus       217 d~~v~iw~~~~~~~~~~~~~~~~~~~------------~-----------------------i-~~~~~~~~~~~l~~~~  260 (488)
                      ++.|+-+|.++++.+-.+.... ...            +                       + ..+++.++...++++ 
T Consensus       181 ~g~v~A~D~~TG~~~W~~~~~~-~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g-  258 (599)
T 1w6s_A          181 RGYLTAYDVKTGEQVWRAYATG-PDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFG-  258 (599)
T ss_dssp             CCEEEEEETTTCCEEEEEESSS-CHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEE-
T ss_pred             CCeEEEEECCCCcEEEEEcCCC-CccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEe-
Confidence            7899999999998776655432 110            0                       0 135666777788887 


Q ss_pred             CCC----------------CcEEEEECCcceeeeeecccc----------ccEE-EEE-ecC---CEEEEeecCCeEEEE
Q psy14511        261 TCT----------------EYIDLWHEQEERLIQKLRTHM----------HQVI-AMC-WNG---NLLSCGTIGGNILHY  309 (488)
Q Consensus       261 ~~~----------------~~i~i~d~~~~~~~~~~~~~~----------~~v~-~~~-~~~---~~l~~~~~dg~i~i~  309 (488)
                      ..+                +.|..+|.++++....++...          .++. .+. .+|   ..++.++.+|.++++
T Consensus       259 ~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~l  338 (599)
T 1w6s_A          259 TGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTL  338 (599)
T ss_dssp             CCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEE
T ss_pred             CCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEE
Confidence            544                479999999998887765421          1222 222 356   567778999999999


Q ss_pred             ECcCCCccceeeec------------CCccE--------------------------EEEEEccCCcEEEEEecCeEEEE
Q psy14511        310 DVRTHSDYPTAITR------------EGDVV--------------------------CGLKWSPNGRYLASGSNNTVKIW  351 (488)
Q Consensus       310 d~~~~~~~~~~~~~------------~~~~i--------------------------~~~~~s~~~~~l~~~~d~~i~iw  351 (488)
                      |.++++.....-..            ...++                          ..++++|+..++++........+
T Consensus       339 D~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~  418 (599)
T 1w6s_A          339 DRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDW  418 (599)
T ss_dssp             ETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEE
T ss_pred             ECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceee
Confidence            99887532221110            01111                          24678888888877663222122


Q ss_pred             ECCCCCCCcccceeeeeecCCCCE-EEEEccC------CCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEe
Q psy14511        352 DFRQLDAKRPLGLIVPKLKREGRE-LVTSHGK------QDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAAS  424 (488)
Q Consensus       352 d~~~~~~~~~~~~~~~~~~~~~~~-l~~~~g~------~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~  424 (488)
                      .+.......- ...+     ...+ +.....+      ..|.|.-||+.+++.+.+.... .+...-.....+.+++.++
T Consensus       419 ~~~~~~~~~g-~~~~-----g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagg~vf~gt  491 (599)
T 1w6s_A          419 EPFMLPYKAG-QFFV-----GATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMER-FAVWGGTMATAGDLVFYGT  491 (599)
T ss_dssp             EECCCCCCTT-SCCC-----CEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEEC
T ss_pred             ecccccccCC-ccee-----cccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCC-CCccCcceEecCCEEEEEC
Confidence            2211100000 0000     0000 1110001      4588999999999988776522 2222212233567888899


Q ss_pred             CCCcEEEEecCCCCccccccccCC--cceEEeecCCCceEE
Q psy14511        425 ADETISIWNCFPRDKKRKARQVGS--GSSLEFAILKQPVSL  463 (488)
Q Consensus       425 ~dg~v~iw~~~~~~~~~~~~~~~~--v~~~~~s~~~~~~~~  463 (488)
                      .||.++.||..+++.+........  ..-+.|..+|+.+..
T Consensus       492 ~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~qyv~  532 (599)
T 1w6s_A          492 LDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQYVA  532 (599)
T ss_dssp             TTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred             CCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEEEEE
Confidence            999999999999998844332222  233556677775543

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=98.96  E-value=6.9e-07  Score=74.90  Aligned_cols=194  Identities=14%  Similarity=0.122  Sum_probs=131.6

Q ss_pred             eeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccc
Q psy14511         83 VKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQS  162 (488)
Q Consensus        83 v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (488)
                      ...+.|++|+ .|+.+.+...++.|.+.|+.+++.+..+......                                   
T Consensus        23 ~~Gl~~~~dg-~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~-----------------------------------   66 (266)
T 2iwa_A           23 TQGLVYAEND-TLFESTGLYGRSSVRQVALQTGKVENIHKMDDSY-----------------------------------   66 (266)
T ss_dssp             EEEEEECSTT-EEEEEECSTTTCEEEEEETTTCCEEEEEECCTTC-----------------------------------
T ss_pred             cccEEEeCCC-eEEEECCCCCCCEEEEEECCCCCEEEEEecCCCc-----------------------------------
Confidence            5789999986 5555543112579999999999987766532110                                   


Q ss_pred             cccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEE-CCCeEEEEECCCCceEEEEecCCCCC
Q psy14511        163 KRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVA-LDTSVYTWNTKTNKTQLLVEYPTYDN  241 (488)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~v~iw~~~~~~~~~~~~~~~~~~  241 (488)
                                                           ....+.+.++.++.+. .++.+.++|..+.+....+....  .
T Consensus        67 -------------------------------------fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~--~  107 (266)
T 2iwa_A           67 -------------------------------------FGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQM--K  107 (266)
T ss_dssp             -------------------------------------CEEEEEEETTEEEEEETTCSEEEEEETTTTEEEEEEECCS--S
T ss_pred             -------------------------------------ceEEEEEeCCEEEEEEecCCEEEEEECCCCcEEEEEECCC--C
Confidence                                                 0011233345666666 78999999999999888776530  1


Q ss_pred             CceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecccc--c---cEEEEEe-cCCEEEEeecCCeEEEEECcCCC
Q psy14511        242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHM--H---QVIAMCW-NGNLLSCGTIGGNILHYDVRTHS  315 (488)
Q Consensus       242 ~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~--~---~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~  315 (488)
                      .   ...++++++.++++ ..++.|.++|..+.+.+..+.-..  .   ....+.+ ++...+....++.|.+.|..+++
T Consensus       108 ~---g~glt~Dg~~l~vs-~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~~~~V~vID~~tg~  183 (266)
T 2iwa_A          108 D---GWGLATDGKILYGS-DGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIWQTDCIARISAKDGT  183 (266)
T ss_dssp             S---CCEEEECSSSEEEE-CSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEEETTTCC
T ss_pred             C---eEEEEECCCEEEEE-CCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEecCCCCeEEEEECCCCc
Confidence            1   13355688888888 678899999999988777765321  1   3566777 56555555567899999999875


Q ss_pred             ccceeeecC-------------CccEEEEEEccCCcEEEEEe-c-CeEEEEECCCC
Q psy14511        316 DYPTAITRE-------------GDVVCGLKWSPNGRYLASGS-N-NTVKIWDFRQL  356 (488)
Q Consensus       316 ~~~~~~~~~-------------~~~i~~~~~s~~~~~l~~~~-d-~~i~iwd~~~~  356 (488)
                       ....+.-.             ....+.++|+|+++.+.+++ . +.+...++...
T Consensus       184 -V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~  238 (266)
T 2iwa_A          184 -LLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV  238 (266)
T ss_dssp             -EEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred             -EEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence             33333211             13568999999987766666 4 88888887654

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=98.94  E-value=4.4e-05  Score=73.33  Aligned_cols=369  Identities=7%  Similarity=-0.035  Sum_probs=195.3

Q ss_pred             cCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec--CCeEEEEeccccCcCCCcccccccccceeEEEEec
Q psy14511         13 IGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCP   90 (488)
Q Consensus        13 ~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~--d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~   90 (488)
                      ....|+..|+.........+.........++|++.+..|..+.  .+.|..++++.......+  ...-......|++.+
T Consensus        16 ~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v--~~~~~~~P~GlAvD~   93 (619)
T 3s94_A           16 NRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNV--VVSGLLSPDGLACDW   93 (619)
T ss_dssp             CSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEE--ECSSCSCEEEEEEET
T ss_pred             ccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEE--EeCCCCCcCeEEEEe
Confidence            3668999998765311222333444578999999777776665  789999998753211111  121224678999999


Q ss_pred             CCCeEEeeeCCcccceEEEEecCCCeeeeeeec-CCCccccccccccccccceeEEEEEeeeeccccceeccccccccce
Q psy14511         91 WEPTLLATGGGICDQTVRLWNSMNGKEKCHVKT-DSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPT  169 (488)
Q Consensus        91 ~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (488)
                      .+..|+.+...  .+.|.+.++.... ...+.. .......++                                     
T Consensus        94 ~~~~ly~~d~~--~~~I~v~~~dG~~-~~~l~~~~l~~P~~Ia-------------------------------------  133 (619)
T 3s94_A           94 LGEKLYWTDSE--TNRIEVSNLDGSL-RKVLFWQELDQPRAIA-------------------------------------  133 (619)
T ss_dssp             TTTEEEEEETT--TTEEEEEETTSCS-CEEEECSSCSCCCCEE-------------------------------------
T ss_pred             cCCEEEEEeCC--CCEEEEEECCCCC-EEEEEeCCCCCCceEE-------------------------------------
Confidence            77788887764  7899999986433 222211 100000000                                     


Q ss_pred             eeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEE--CCCeEEEEECCCCceEEEEecCCCCCCceEEE
Q psy14511        170 QFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVA--LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCV  247 (488)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~  247 (488)
                                                        ++...+.++.+.  ..+.|...+++..........   .-.....+
T Consensus       134 ----------------------------------vdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~---~~~~P~Gl  176 (619)
T 3s94_A          134 ----------------------------------LDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINS---EIYWPNGL  176 (619)
T ss_dssp             ----------------------------------EETTTTEEEEEECSSSCEEEEEETTSCSCEEEECS---SCSSEEEE
T ss_pred             ----------------------------------EecCCCeEEEeccCCCCEEEEEECCCCceEEEEeC---CCCCCcEE
Confidence                                              111123344333  235666666654433333321   33467899


Q ss_pred             EEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEecCCEEE-EeecCCeEEEEECcCCCccceee-----
Q psy14511        248 AWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLS-CGTIGGNILHYDVRTHSDYPTAI-----  321 (488)
Q Consensus       248 ~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~-----  321 (488)
                      +++++++.|+.+-...+.|..+|+..........+.......+++++..++ +-..++.|...|..+++......     
T Consensus       177 ald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~~ly~td~~~~~V~~~d~~tg~~~~~i~~~~~~  256 (619)
T 3s94_A          177 TLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIHSDIFS  256 (619)
T ss_dssp             EEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSSEEEEECTTTCSEEEEESSSCCCCEECCSCCCC
T ss_pred             EEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCCEEEEecCCCCEEEEEECCCCcccEEEecCCCC
Confidence            999988888888567788999988764333222211222245666444444 44456678777775543110000     


Q ss_pred             -----ecCC--------------ccEEEEE-----------Ecc-------CC--------cEEEEEecCeEEEEECCCC
Q psy14511        322 -----TREG--------------DVVCGLK-----------WSP-------NG--------RYLASGSNNTVKIWDFRQL  356 (488)
Q Consensus       322 -----~~~~--------------~~i~~~~-----------~s~-------~~--------~~l~~~~d~~i~iwd~~~~  356 (488)
                           ..|.              +....++           ..|       |+        .+|+.+..+.|+..++...
T Consensus       257 p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~~Ll~~~~~~i~~i~l~~~  336 (619)
T 3s94_A          257 PMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATELLLLARRTDLRRISLDTP  336 (619)
T ss_dssp             CSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSEEEEEEESSCEEEEESSST
T ss_pred             CcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCCCceEEEEEcccceEEEecCCC
Confidence                 0000              0000011           111       21        2455555677888888755


Q ss_pred             CCCc---c---cceee-eeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCC-EEEEEeCCCc
Q psy14511        357 DAKR---P---LGLIV-PKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQT-CVAAASADET  428 (488)
Q Consensus       357 ~~~~---~---~~~~~-~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~t~~~dg~  428 (488)
                      +...   +   +.... -+|.+.+..++.+ ....+.|+.+++........+...-.....+++.+.++ +..+-+..+.
T Consensus       337 ~~~~~~~~~~~l~~~~~ld~d~~~~~ly~s-D~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~  415 (619)
T 3s94_A          337 DFTDIVLQLEDIRHAIAIDYDPVEGYIYWT-DDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDR  415 (619)
T ss_dssp             TCCCEECCCSCCSSEEEEEEETTTTEEEEE-ETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTE
T ss_pred             ccceeEEeccccCccEEEEEEcCCCeEEEE-eCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCc
Confidence            4221   1   11111 2677765655554 45577888888865443333333334577899987555 4455556788


Q ss_pred             EEEEecCCCCccccc-cccCCcceEEeecCCCce
Q psy14511        429 ISIWNCFPRDKKRKA-RQVGSGSSLEFAILKQPV  461 (488)
Q Consensus       429 v~iw~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~  461 (488)
                      |.+.++......... ..-.....+++.|....+
T Consensus       416 I~v~~~~G~~~~~l~~~~l~~P~~iavdp~~G~l  449 (619)
T 3s94_A          416 IEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYM  449 (619)
T ss_dssp             EEEEETTSCSCEEEECTTCCSEEEEEEETTTTEE
T ss_pred             EEEEeCCCCeEEEEEECCCCCeeeEEEEcCCCcE
Confidence            999998865443332 233456788888863333

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=98.89  E-value=1.1e-06  Score=72.75  Aligned_cols=153  Identities=14%  Similarity=0.112  Sum_probs=98.5

Q ss_pred             ccceeeeeeeCCCcEEEEE-CCC--eEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCc
Q psy14511        197 NDFYTSGLDWGYHDTLAVA-LDT--SVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE  273 (488)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~-~d~--~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~  273 (488)
                      ...+...+.++++.++.++ .+|  .|+.+|+++++......++.  ...-..+++  +++.|....-.++.+.+||..+
T Consensus        41 ~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~--~~FgeGit~--~g~~ly~ltw~~~~v~v~D~~t  116 (262)
T 3nol_A           41 TKAFTEGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK--RYFGEGISD--WKDKIVGLTWKNGLGFVWNIRN  116 (262)
T ss_dssp             TTCEEEEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT--TCCEEEEEE--ETTEEEEEESSSSEEEEEETTT
T ss_pred             CCcccceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecCC--ccceeEEEE--eCCEEEEEEeeCCEEEEEECcc
Confidence            3345566777766666665 444  89999999999988887642  212233444  4556666646799999999999


Q ss_pred             ceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCccceeeec--CC---ccEEEEEEccCCcEEEEEe-cCe
Q psy14511        274 ERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITR--EG---DVVCGLKWSPNGRYLASGS-NNT  347 (488)
Q Consensus       274 ~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~---~~i~~~~~s~~~~~l~~~~-d~~  347 (488)
                      .+.+.++.... .-..++++++.|+....++.|.++|..+.+. ...+.-  ..   ..++.+.|. +|+..+..- ++.
T Consensus       117 ~~~~~ti~~~~-eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v-~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~  193 (262)
T 3nol_A          117 LRQVRSFNYDG-EGWGLTHNDQYLIMSDGTPVLRFLDPESLTP-VRTITVTAHGEELPELNELEWV-DGEIFANVWQTNK  193 (262)
T ss_dssp             CCEEEEEECSS-CCCCEEECSSCEEECCSSSEEEEECTTTCSE-EEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSE
T ss_pred             CcEEEEEECCC-CceEEecCCCEEEEECCCCeEEEEcCCCCeE-EEEEEeccCCccccccceeEEE-CCEEEEEEccCCe
Confidence            99998886533 3357778888777777788899999987642 222221  11   224456665 565443332 255


Q ss_pred             EEEEECCCC
Q psy14511        348 VKIWDFRQL  356 (488)
Q Consensus       348 i~iwd~~~~  356 (488)
                      |.+.|.+++
T Consensus       194 I~vIDp~tG  202 (262)
T 3nol_A          194 IVRIDPETG  202 (262)
T ss_dssp             EEEECTTTC
T ss_pred             EEEEECCCC
Confidence            555555543

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=98.89  E-value=1.4e-06  Score=72.08  Aligned_cols=130  Identities=12%  Similarity=0.212  Sum_probs=91.1

Q ss_pred             CCcEEEEE-CCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccc--c
Q psy14511        208 YHDTLAVA-LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTH--M  284 (488)
Q Consensus       208 ~~~~~~~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~--~  284 (488)
                      ++.++... .++.+.+||..+.+....+...+ ..     ..+.++++.|+.+ ..++.|.++|..+.+.+..+.-.  .
T Consensus        96 g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~-eG-----~glt~dg~~L~~S-dGs~~i~~iDp~T~~v~~~I~V~~~g  168 (262)
T 3nol_A           96 KDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDG-EG-----WGLTHNDQYLIMS-DGTPVLRFLDPESLTPVRTITVTAHG  168 (262)
T ss_dssp             TTEEEEEESSSSEEEEEETTTCCEEEEEECSS-CC-----CCEEECSSCEEEC-CSSSEEEEECTTTCSEEEEEECEETT
T ss_pred             CCEEEEEEeeCCEEEEEECccCcEEEEEECCC-Cc-----eEEecCCCEEEEE-CCCCeEEEEcCCCCeEEEEEEeccCC
Confidence            45666666 68999999999999988888753 21     2333577888888 56788999999998887776542  1


Q ss_pred             ---ccEEEEEe-cCCEEEEeecCCeEEEEECcCCCccceeeec------------CCccEEEEEEccCCcEEEEEec
Q psy14511        285 ---HQVIAMCW-NGNLLSCGTIGGNILHYDVRTHSDYPTAITR------------EGDVVCGLKWSPNGRYLASGSN  345 (488)
Q Consensus       285 ---~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~------------~~~~i~~~~~s~~~~~l~~~~d  345 (488)
                         ..+..+.+ +|+..+..-.++.|.+.|..+++ ....+..            .....+.+||+|+++.|.+.+.
T Consensus       169 ~~~~~lNELe~~~G~lyan~w~~~~I~vIDp~tG~-V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK  244 (262)
T 3nol_A          169 EELPELNELEWVDGEIFANVWQTNKIVRIDPETGK-VTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK  244 (262)
T ss_dssp             EECCCEEEEEEETTEEEEEETTSSEEEEECTTTCB-EEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred             ccccccceeEEECCEEEEEEccCCeEEEEECCCCc-EEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence               23455677 66655555568899999998875 2222221            1245689999998877777664

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=98.88  E-value=3.2e-06  Score=69.31  Aligned_cols=155  Identities=16%  Similarity=0.046  Sum_probs=100.5

Q ss_pred             ccccceeeeeeeCCCcEEEEECC---CeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEEC
Q psy14511        195 IINDFYTSGLDWGYHDTLAVALD---TSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHE  271 (488)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~d---~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~  271 (488)
                      .....+...+.++++.++.++..   ..|+.+|+.+++......++.  ...-..+++.  ++.|....-.++.+.+||.
T Consensus        17 hd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~--~~fgeGi~~~--~~~ly~ltw~~~~v~v~D~   92 (243)
T 3mbr_X           17 HDTTAFTEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPP--PYFGAGIVAW--RDRLIQLTWRNHEGFVYDL   92 (243)
T ss_dssp             CCTTCCEEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCT--TCCEEEEEEE--TTEEEEEESSSSEEEEEET
T ss_pred             CCCccccccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCC--CcceeEEEEe--CCEEEEEEeeCCEEEEEEC
Confidence            34445566777888877777643   589999999999988887653  1122334443  4556655478999999999


Q ss_pred             CcceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCccceeeec--CC---ccEEEEEEccCCcEEEEEe-c
Q psy14511        272 QEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITR--EG---DVVCGLKWSPNGRYLASGS-N  345 (488)
Q Consensus       272 ~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~---~~i~~~~~s~~~~~l~~~~-d  345 (488)
                      .+.+.+.++.... .-..++.+++.|+....++.|.++|..+.+ ....+.-  +.   ..++.+.+. +|+..+..- +
T Consensus        93 ~tl~~~~ti~~~~-~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~-~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s  169 (243)
T 3mbr_X           93 ATLTPRARFRYPG-EGWALTSDDSHLYMSDGTAVIRKLDPDTLQ-QVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLT  169 (243)
T ss_dssp             TTTEEEEEEECSS-CCCEEEECSSCEEEECSSSEEEEECTTTCC-EEEEEECEETTEECCCEEEEEEE-TTEEEEEETTT
T ss_pred             CcCcEEEEEeCCC-CceEEeeCCCEEEEECCCCeEEEEeCCCCe-EEEEEEEccCCcccccceeeEEe-CCEEEEEECCC
Confidence            9999998887533 336778888777777778999999998764 2222221  11   224455554 555443332 2


Q ss_pred             CeEEEEECCCC
Q psy14511        346 NTVKIWDFRQL  356 (488)
Q Consensus       346 ~~i~iwd~~~~  356 (488)
                      ..|.+.|.+++
T Consensus       170 ~~I~vIDp~tG  180 (243)
T 3mbr_X          170 SRIARIDPASG  180 (243)
T ss_dssp             TEEEEECTTTC
T ss_pred             CeEEEEECCCC
Confidence            55555555443

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=98.84  E-value=2.2e-05  Score=74.89  Aligned_cols=252  Identities=11%  Similarity=0.034  Sum_probs=149.6

Q ss_pred             CCcEEEEECCCeEEEEECCCCceEEEEecCCCCC--CceE---EEEEc-CCCC-eEEEEeC------CCCcEEEEECCcc
Q psy14511        208 YHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDN--AYIS---CVAWK-PRTT-DLAVTNT------CTEYIDLWHEQEE  274 (488)
Q Consensus       208 ~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~--~~i~---~~~~~-~~~~-~l~~~~~------~~~~i~i~d~~~~  274 (488)
                      ++.+++++.++.|.-+|..+++..-...... +.  ..+.   .+.=. .+++ .++++ .      .++.|..+|..++
T Consensus       117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~-~~~~~~~~~sP~v~~~~~~G~~~v~vg-~~~~e~~~~g~v~alD~~tG  194 (582)
T 1flg_A          117 GDKVFFGTLDASVVALNKNTGKVVWKKKFAD-HGAGYTMTGAPTIVKDGKTGKVLLIHG-SSGDEFGVVGRLFARDPDTG  194 (582)
T ss_dssp             TTEEEEEETTTEEEEEESSSCCEEEEEECSC-GGGTCBCCSCCEEEECTTTCCEEEEEC-CBCGGGCCBCEEEEECTTTC
T ss_pred             CCEEEEEeCCCEEEEEECCCCCEEeeecCCC-CCcCcccccCCEEeCCCcCCcEEEEEe-ccccccCCCCEEEEEECCCC
Confidence            4678888899999999999999876665432 10  0111   11111 1233 45554 3      3789999999998


Q ss_pred             eeeeeeccccccE-----------------------------------------EEEEe--cCCEEEEeec---------
Q psy14511        275 RLIQKLRTHMHQV-----------------------------------------IAMCW--NGNLLSCGTI---------  302 (488)
Q Consensus       275 ~~~~~~~~~~~~v-----------------------------------------~~~~~--~~~~l~~~~~---------  302 (488)
                      +.+.........+                                         ..+++  +..+++.+..         
T Consensus       195 ~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~  274 (582)
T 1flg_A          195 EEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWA  274 (582)
T ss_dssp             CEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGG
T ss_pred             CEEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcc
Confidence            8776543211000                                         01223  3456665552         


Q ss_pred             -----------C----CeEEEEECcCCCccceeee-cCC--------ccEEEEEEc-cCCc---EEEEEe-cCeEEEEEC
Q psy14511        303 -----------G----GNILHYDVRTHSDYPTAIT-REG--------DVVCGLKWS-PNGR---YLASGS-NNTVKIWDF  353 (488)
Q Consensus       303 -----------d----g~i~i~d~~~~~~~~~~~~-~~~--------~~i~~~~~s-~~~~---~l~~~~-d~~i~iwd~  353 (488)
                                 |    +.|..+|..+++..-.... .|.        .++. +... .+|+   .++.++ +|.++++|.
T Consensus       275 r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~  353 (582)
T 1flg_A          275 RTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDR  353 (582)
T ss_dssp             GSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEET
T ss_pred             cccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEEC
Confidence                       2    5899999998764333222 221        2222 2222 4674   666776 599999998


Q ss_pred             CCCCCCccccee--------------------------------------------------eeeecCCCCEEEEEcc--
Q psy14511        354 RQLDAKRPLGLI--------------------------------------------------VPKLKREGRELVTSHG--  381 (488)
Q Consensus       354 ~~~~~~~~~~~~--------------------------------------------------~~~~~~~~~~l~~~~g--  381 (488)
                      ++++..-.....                                                  ..+++|+...+++...  
T Consensus       354 ~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~  433 (582)
T 1flg_A          354 SNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHW  433 (582)
T ss_dssp             TTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECE
T ss_pred             CCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhc
Confidence            877543111000                                                  0145565555544210  


Q ss_pred             -----------------------------CCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEE
Q psy14511        382 -----------------------------KQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIW  432 (488)
Q Consensus       382 -----------------------------~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw  432 (488)
                                                   ..+|.|.-||+.+++.+.+..... ++..-.....+.+++.++.||.++.|
T Consensus       434 ~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~  512 (582)
T 1flg_A          434 KEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAF  512 (582)
T ss_dssp             EEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEE
T ss_pred             ceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEE
Confidence                                         136889999999999887765432 22222222356788889999999999


Q ss_pred             ecCCCCccccccccCCcc--eEEeecCCCceEE
Q psy14511        433 NCFPRDKKRKARQVGSGS--SLEFAILKQPVSL  463 (488)
Q Consensus       433 ~~~~~~~~~~~~~~~~v~--~~~~s~~~~~~~~  463 (488)
                      |..+++.+........+.  -+.|..+|+.+..
T Consensus       513 D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~  545 (582)
T 1flg_A          513 DAKSGKELWKFQTGSGIVSPPITWEQDGEQYLG  545 (582)
T ss_dssp             ETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred             ECCCCCEEEEecCCCCcccCceEEEECCEEEEE
Confidence            999999885544444443  3667777776544

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=98.84  E-value=3.4e-05  Score=68.60  Aligned_cols=225  Identities=8%  Similarity=-0.009  Sum_probs=141.7

Q ss_pred             CcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEE
Q psy14511        209 HDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVI  288 (488)
Q Consensus       209 ~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~  288 (488)
                      ..++..+....|+..++..........    ....+..++|++....|+.+-...+.|..+++........+........
T Consensus        44 ~~~ll~~~~~~I~~i~~~g~~~~~~~~----~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~  119 (349)
T 3v64_C           44 EPVLLFANRIDIRQVLPHRSEYTLLLN----NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPG  119 (349)
T ss_dssp             CCEEEEECBSCEEEECTTSCCEEEEEC----SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCC
T ss_pred             CceeEeecccceEEEeCCCCeeEEeec----CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCcc
Confidence            445666667778888888766554443    3345789999988888887746778899999876543333322222233


Q ss_pred             EEEe---cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe--c-CeEEEEECCCCCCCccc
Q psy14511        289 AMCW---NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--N-NTVKIWDFRQLDAKRPL  362 (488)
Q Consensus       289 ~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--d-~~i~iwd~~~~~~~~~~  362 (488)
                      .+++   ++++.++-...+.|.+.++.... ........-.....++++|.+..|..+.  . +.|..+++.........
T Consensus       120 glavd~~~g~ly~~d~~~~~I~~~~~dG~~-~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~  198 (349)
T 3v64_C          120 GLAVDWVHDKLYWTDSGTSRIEVANLDGAH-RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIA  198 (349)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESC
T ss_pred             EEEEecCCCeEEEEcCCCCeEEEEcCCCCc-eEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEE
Confidence            4444   34555666667889999987532 2222333335578999999776666555  3 77888888743222211


Q ss_pred             ce-e----eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCC
Q psy14511        363 GL-I----VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPR  437 (488)
Q Consensus       363 ~~-~----~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~  437 (488)
                      .. .    -.+++|++..|+.+ ....+.|..+|+........+.........+++ ..+..+++-...+.|...+..++
T Consensus       199 ~~~~~~PnGla~d~~~~~lY~a-D~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G  276 (349)
T 3v64_C          199 DTHLFWPNGLTIDYAGRRMYWV-DAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTG  276 (349)
T ss_dssp             CSSCSCEEEEEEETTTTEEEEE-ETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTC
T ss_pred             ECCCCCcceEEEeCCCCEEEEE-ECCCCEEEEEeCCCCceEEEEeCCCCCceEEEE-ECCEEEEecCCCCeEEEEEccCC
Confidence            11 1    12889888777775 456788999998643333333333445677888 34555566666788888886666


Q ss_pred             Ccc
Q psy14511        438 DKK  440 (488)
Q Consensus       438 ~~~  440 (488)
                      +..
T Consensus       277 ~~~  279 (349)
T 3v64_C          277 KNQ  279 (349)
T ss_dssp             CSC
T ss_pred             Ccc
Confidence            554

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=98.83  E-value=1.2e-06  Score=85.28  Aligned_cols=81  Identities=17%  Similarity=0.256  Sum_probs=51.9

Q ss_pred             CCcEEEEECCcceeeeeeccccccE-EEEEecCCEEEEeecCCeEEEEECcCCCccceeeecCCcc-EEEEEEccCCc-E
Q psy14511        263 TEYIDLWHEQEERLIQKLRTHMHQV-IAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDV-VCGLKWSPNGR-Y  339 (488)
Q Consensus       263 ~~~i~i~d~~~~~~~~~~~~~~~~v-~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~-i~~~~~s~~~~-~  339 (488)
                      +|.|..||+.+++.+.....+.... ..+...+.+++.++.|+.++.||.++++. +..+...... -.-+.+..+|+ +
T Consensus       437 ~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~-l~~~~~~~~~~~~p~~~~~~G~~y  515 (668)
T 1kv9_A          437 SGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEA-LWQFEAQSGIVAAPMTFELAGRQY  515 (668)
T ss_dssp             EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCE-EEEEECSSCCCSCCEEEEETTEEE
T ss_pred             cceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhhhcChh-heEecCCCCcccCceEEEECCEEE
Confidence            3789999999999887765433222 24445788999999999999999998753 3333322211 11234455776 4


Q ss_pred             EEEEe
Q psy14511        340 LASGS  344 (488)
Q Consensus       340 l~~~~  344 (488)
                      ++.+.
T Consensus       516 va~~~  520 (668)
T 1kv9_A          516 VAIMA  520 (668)
T ss_dssp             EEEEE
T ss_pred             EEEEe
Confidence            44443

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=98.82  E-value=2.3e-06  Score=70.73  Aligned_cols=130  Identities=11%  Similarity=0.126  Sum_probs=91.1

Q ss_pred             CCCcEEEEE-CCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccc--
Q psy14511        207 GYHDTLAVA-LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTH--  283 (488)
Q Consensus       207 ~~~~~~~~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~--  283 (488)
                      .++.++... .++.+.+||..+.+.+..+...+ ..   ..++  ++++.|+++ ..++.|.++|..+.+.+..+.-.  
T Consensus       104 ~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~-eG---wGLt--~Dg~~L~vS-dGs~~l~~iDp~T~~v~~~I~V~~~  176 (268)
T 3nok_A          104 DGERLYQLTWTEGLLFTWSGMPPQRERTTRYSG-EG---WGLC--YWNGKLVRS-DGGTMLTFHEPDGFALVGAVQVKLR  176 (268)
T ss_dssp             CSSCEEEEESSSCEEEEEETTTTEEEEEEECSS-CC---CCEE--EETTEEEEE-CSSSEEEEECTTTCCEEEEEECEET
T ss_pred             eCCEEEEEEccCCEEEEEECCcCcEEEEEeCCC-ce---eEEe--cCCCEEEEE-CCCCEEEEEcCCCCeEEEEEEeCCC
Confidence            345666666 78999999999999998888753 21   2333  578888888 67899999999998887776532  


Q ss_pred             c---ccEEEEEe-cCCEEEEeecCCeEEEEECcCCCccceeee-------------cCCccEEEEEEccCCcEEEEEe
Q psy14511        284 M---HQVIAMCW-NGNLLSCGTIGGNILHYDVRTHSDYPTAIT-------------REGDVVCGLKWSPNGRYLASGS  344 (488)
Q Consensus       284 ~---~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-------------~~~~~i~~~~~s~~~~~l~~~~  344 (488)
                      .   ..+..+.| +|+..+....+..|.+.|..+++. ...+.             ...+..+.+|++|+++.|...+
T Consensus       177 g~~v~~lNeLe~~dG~lyanvw~s~~I~vIDp~TG~V-~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG  253 (268)
T 3nok_A          177 GQPVELINELECANGVIYANIWHSSDVLEIDPATGTV-VGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG  253 (268)
T ss_dssp             TEECCCEEEEEEETTEEEEEETTCSEEEEECTTTCBE-EEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred             CcccccccccEEeCCEEEEEECCCCeEEEEeCCCCcE-EEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence            2   23466777 676555555688999999988752 22221             1224578999999876555554

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=98.82  E-value=4.2e-06  Score=68.62  Aligned_cols=130  Identities=14%  Similarity=0.220  Sum_probs=91.2

Q ss_pred             CCcEEEEE-CCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecccc--
Q psy14511        208 YHDTLAVA-LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHM--  284 (488)
Q Consensus       208 ~~~~~~~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~--  284 (488)
                      +++++... .++.+.+||..+.+.+..+...+ . +  ..++  +++..|+++ ..++.|.++|..+.+.+.++.-..  
T Consensus        74 ~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~-~-G--wglt--~dg~~L~vS-dgs~~l~~iDp~t~~~~~~I~V~~~g  146 (243)
T 3mbr_X           74 RDRLIQLTWRNHEGFVYDLATLTPRARFRYPG-E-G--WALT--SDDSHLYMS-DGTAVIRKLDPDTLQQVGSIKVTAGG  146 (243)
T ss_dssp             TTEEEEEESSSSEEEEEETTTTEEEEEEECSS-C-C--CEEE--ECSSCEEEE-CSSSEEEEECTTTCCEEEEEECEETT
T ss_pred             CCEEEEEEeeCCEEEEEECCcCcEEEEEeCCC-C-c--eEEe--eCCCEEEEE-CCCCeEEEEeCCCCeEEEEEEEccCC
Confidence            45566665 78999999999999998888753 2 1  2333  577888888 668899999999988877765422  


Q ss_pred             ---ccEEEEEe-cCCEEEEeecCCeEEEEECcCCCccceeee-------------cCCccEEEEEEccCCcEEEEEec
Q psy14511        285 ---HQVIAMCW-NGNLLSCGTIGGNILHYDVRTHSDYPTAIT-------------REGDVVCGLKWSPNGRYLASGSN  345 (488)
Q Consensus       285 ---~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-------------~~~~~i~~~~~s~~~~~l~~~~d  345 (488)
                         ..++.+.+ +|+..+..-.+..|.+.|..+++. ...+.             ...+..+.++++|+++.|...+.
T Consensus       147 ~~~~~lNeLe~~~G~lyanvw~s~~I~vIDp~tG~V-~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK  223 (243)
T 3mbr_X          147 RPLDNLNELEWVNGELLANVWLTSRIARIDPASGKV-VAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK  223 (243)
T ss_dssp             EECCCEEEEEEETTEEEEEETTTTEEEEECTTTCBE-EEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred             cccccceeeEEeCCEEEEEECCCCeEEEEECCCCCE-EEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence               34566777 566555555678999999988752 22221             12245789999998776666663

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.81  E-value=1.6e-05  Score=71.94  Aligned_cols=225  Identities=8%  Similarity=0.011  Sum_probs=143.0

Q ss_pred             CcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEE
Q psy14511        209 HDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVI  288 (488)
Q Consensus       209 ~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~  288 (488)
                      ..++..+....|+.+++..........    ....+..++|++.+..|+.+-...+.|..+++........+........
T Consensus        87 ~~~l~~~~~~~I~~i~~~~~~~~~~~~----~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~  162 (386)
T 3v65_B           87 EPVLLFANRIDIRQVLPHRSEYTLLLN----NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPG  162 (386)
T ss_dssp             CCEEEEECBSCEEEECTTSCCCEEEEC----SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCC
T ss_pred             cceeEeecCccceeeccCCCcEEEEec----CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCcc
Confidence            446666677889999988776655544    3345789999988777777746778899999877543333322222223


Q ss_pred             --EEEe-cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe--c-CeEEEEECCCCCCCccc
Q psy14511        289 --AMCW-NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--N-NTVKIWDFRQLDAKRPL  362 (488)
Q Consensus       289 --~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--d-~~i~iwd~~~~~~~~~~  362 (488)
                        ++.+ .+++.++-...+.|.+.++.... ....+...-.....++++|.+..|..+.  . +.|..+++.........
T Consensus       163 glavd~~~g~lY~~d~~~~~I~~~~~dg~~-~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~  241 (386)
T 3v65_B          163 GLAVDWVHDKLYWTDSGTSRIEVANLDGAH-RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIA  241 (386)
T ss_dssp             CEEEETTTTEEEEEETTTTEEEECBTTSCS-CEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE
T ss_pred             EEEEEeCCCeEEEEcCCCCeEEEEeCCCCc-eEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEE
Confidence              4444 34555565667888888886532 2223333335578999999777666655  3 67888888643222111


Q ss_pred             ce-e----eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCC
Q psy14511        363 GL-I----VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPR  437 (488)
Q Consensus       363 ~~-~----~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~  437 (488)
                      .. .    -.+++|++..|+.+ ....+.|..+|+........+.........+++ ..+..+++-...+.|..++..++
T Consensus       242 ~~~~~~PnGlavd~~~~~lY~a-D~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G  319 (386)
T 3v65_B          242 DTHLFWPNGLTIDYAGRRMYWV-DAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTG  319 (386)
T ss_dssp             CSSCSCEEEEEEEGGGTEEEEE-ETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTC
T ss_pred             ECCCCCeeeEEEeCCCCEEEEE-ECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEECCCC
Confidence            11 1    12888877777765 456788999998644333333333445678888 44556666667788998886666


Q ss_pred             Ccc
Q psy14511        438 DKK  440 (488)
Q Consensus       438 ~~~  440 (488)
                      +..
T Consensus       320 ~~~  322 (386)
T 3v65_B          320 KNQ  322 (386)
T ss_dssp             CSC
T ss_pred             cce
Confidence            554

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=98.79  E-value=0.00014  Score=69.91  Aligned_cols=422  Identities=10%  Similarity=-0.017  Sum_probs=206.7

Q ss_pred             cc-CCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec---CCeEEEEeccccCcCCCccccc
Q psy14511          2 CW-NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS---NNTVKIWDFRQLDAKRPQVNNQ   77 (488)
Q Consensus         2 ~~-dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~---d~~i~vwd~~~~~~~~~~~~~~   77 (488)
                      .| +++++.+-...+.|.+.+..... ..............|++.|.+.+|....   .+.|...+++. .....+.  .
T Consensus        92 D~~~~~ly~~d~~~~~I~v~~~dG~~-~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG-~~~~~l~--~  167 (619)
T 3s94_A           92 DWLGEKLYWTDSETNRIEVSNLDGSL-RKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG-SSRFIII--N  167 (619)
T ss_dssp             ETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTS-CSCEEEE--C
T ss_pred             EecCCEEEEEeCCCCEEEEEECCCCC-EEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCC-CceEEEE--e
Confidence            46 45556666677899999987543 2233334444567899999755555443   46777777663 2222221  1


Q ss_pred             ccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCcccccccccccc-------ccceeEEEEEee
Q psy14511         78 CHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQ-------KKRRHLSFLLHG  150 (488)
Q Consensus        78 ~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~  150 (488)
                      ..-.....|++.++++.|+.+-..  .+.|...+++.................+.  ....       ....+..+....
T Consensus       168 ~~~~~P~Glald~~~~~LY~aD~~--~~~I~~~~~dG~~~~~~~~~~~~~P~gi~--~~~~~ly~td~~~~~V~~~d~~t  243 (619)
T 3s94_A          168 SEIYWPNGLTLDYEEQKLYWADAK--LNFIHKSNLDGTNRQAVVKGSLPHPFALT--LFEDILYWTDWSTHSILACNKYT  243 (619)
T ss_dssp             SSCSSEEEEEEETTTTEEEEEETT--TCCEEEESSSCCEEC---------CCCEE--ESSSEEEEECTTTCSEEEEESSS
T ss_pred             CCCCCCcEEEEEccCCEEEEEeCC--CCeEEEecCCCCccEEEEeCCCCCceEEE--EeCCEEEEecCCCCEEEEEECCC
Confidence            123457899999988888887764  78899999865443322221111111111  1111       000111111100


Q ss_pred             eeccccceecccc-ccccceeeecccc---ccccccc-CC-CceeecCCCccccceeee------------eeeCCCcEE
Q psy14511        151 FEIDRKKVLNQSK-RTVSPTQFLRTLG---KLPRKVK-AK-PERILEAPSIINDFYTSG------------LDWGYHDTL  212 (488)
Q Consensus       151 ~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~-~~-~~~~~~~~~~~~~~~~~~------------~~~~~~~~~  212 (488)
                      ..  ....+.... .+.....+....+   ..+.... .. ....+..+.. ..+.+.+            +...+..++
T Consensus       244 g~--~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~-~~~~C~C~~g~~l~~d~~~C~~~~~~~L  320 (619)
T 3s94_A          244 GE--GLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVK-PFYQCACPTGVKLLENGKTCKDGATELL  320 (619)
T ss_dssp             CC--CCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSST-TSEEEECCTTCCBCTTSSCBCSSCSEEE
T ss_pred             Cc--ccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCC-CCceEeCCchheecccCcccCCCCceEE
Confidence            00  000000000 0000000000000   0000000 00 0000000000 0000000            111134566


Q ss_pred             EEECCCeEEEEECCCCceEE-EEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEE
Q psy14511        213 AVALDTSVYTWNTKTNKTQL-LVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMC  291 (488)
Q Consensus       213 ~~~~d~~v~iw~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~  291 (488)
                      ..+..+.|+..++....... .+...  .-..+.+++|.+.+..|+.+-...+.|+.+++........+...-.....++
T Consensus       321 l~~~~~~i~~i~l~~~~~~~~~~~~~--~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlA  398 (619)
T 3s94_A          321 LLARRTDLRRISLDTPDFTDIVLQLE--DIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIA  398 (619)
T ss_dssp             EEEESSCEEEEESSSTTCCCEECCCS--CCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEE
T ss_pred             EEEcccceEEEecCCCccceeEEecc--ccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceE
Confidence            66777788888887665322 22222  3345789999997778877745678899998876433333322222334445


Q ss_pred             e---cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe--c-CeEEEEECCCCCCCcccc--
Q psy14511        292 W---NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--N-NTVKIWDFRQLDAKRPLG--  363 (488)
Q Consensus       292 ~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--d-~~i~iwd~~~~~~~~~~~--  363 (488)
                      +   .+++.++-+..+.|.+.++.... ........-.....+++.|....|..+.  . ..|...++..........  
T Consensus       399 vD~~~~~lY~tD~~~~~I~v~~~~G~~-~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~  477 (619)
T 3s94_A          399 VDWVARNLYWTDTGTDRIEVTRLNGTM-RKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTS  477 (619)
T ss_dssp             EETTTTEEEEEETTTTEEEEEETTSCS-CEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSS
T ss_pred             EecccCcEEEEeCCCCcEEEEeCCCCe-EEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeCC
Confidence            4   34555665667899999987542 2222223345578999999754555443  2 677777776432211111  


Q ss_pred             --eee-eeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCc
Q psy14511        364 --LIV-PKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDK  439 (488)
Q Consensus       364 --~~~-~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~  439 (488)
                        ... -++++++..|+.+ -...+.|..+++........+...-....+++...+ ....+-...+.|...+..++..
T Consensus       478 l~~P~GlalD~~~~~LY~a-D~~~~~I~~~~~dG~~~~~~~~~~l~~P~glav~~~-~ly~tD~~~~~I~~~~k~~g~~  554 (619)
T 3s94_A          478 LGWPNGLALDYDEGKIYWG-DAKTDKIEVMNTDGTGRRVLVEDKIPHIFGFTLLGD-YVYWTDWQRRSIERVHKRSAER  554 (619)
T ss_dssp             CSCEEEEEEETTTTEEEEE-ETTTTEEEEEESSSCCCEEEEECCCCSSCCEEEETT-EEEEECTTSSCEEEEESSSCCE
T ss_pred             CCCCeeeEEcccCCEEEEE-ECCCCEEEEEecCCCceEEEeccCCCCcEEEEEECC-EEEEeecCCCeEEEEEcCCCce
Confidence              111 1778777777765 455678888887543322222222223345555433 3333333456777777777643

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=98.77  E-value=1.3e-06  Score=72.21  Aligned_cols=174  Identities=11%  Similarity=0.032  Sum_probs=119.4

Q ss_pred             EEEEEec-CCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe--cCeEEEEECCCCCCCcccc
Q psy14511        287 VIAMCWN-GNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAKRPLG  363 (488)
Q Consensus       287 v~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--d~~i~iwd~~~~~~~~~~~  363 (488)
                      ...+.++ +.+..+.+.+|.|+++|+.+++..... ......-..+++  ++..|....  ++.+.+||..+.+....+.
T Consensus        57 tqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~--~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~  133 (268)
T 3nok_A           57 TQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLAS--DGERLYQLTWTEGLLFTWSGMPPQRERTTR  133 (268)
T ss_dssp             EEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEE--CSSCEEEEESSSCEEEEEETTTTEEEEEEE
T ss_pred             cceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEE--eCCEEEEEEccCCEEEEEECCcCcEEEEEe
Confidence            3677775 455666777889999999997644333 222211223444  455555555  5999999999986655554


Q ss_pred             eeee--eecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeecc-----ccEEEEEEcCCCCEEEEEeCCCcEEEEecCC
Q psy14511        364 LIVP--KLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQ-----ERILSAVLSPDQTCVAAASADETISIWNCFP  436 (488)
Q Consensus       364 ~~~~--~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~-----~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~  436 (488)
                      ....  .+.++++.|+.+.  .++.|.++|.++.+.+.++.-..     ..++.+.|. +|+..|..-.+..|.+-|..+
T Consensus       134 ~~~eGwGLt~Dg~~L~vSd--Gs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~T  210 (268)
T 3nok_A          134 YSGEGWGLCYWNGKLVRSD--GGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPAT  210 (268)
T ss_dssp             CSSCCCCEEEETTEEEEEC--SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTT
T ss_pred             CCCceeEEecCCCEEEEEC--CCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCC
Confidence            3222  6668899888853  48899999999999888775422     245778887 787666666788999999999


Q ss_pred             CCccccccc--------------cCCcceEEeecCCCceEEEEe
Q psy14511        437 RDKKRKARQ--------------VGSGSSLEFAILKQPVSLTAL  466 (488)
Q Consensus       437 ~~~~~~~~~--------------~~~v~~~~~s~~~~~~~~~~~  466 (488)
                      ++.......              ..-...++|.|+++.+-..+.
T Consensus       211 G~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK  254 (268)
T 3nok_A          211 GTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK  254 (268)
T ss_dssp             CBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred             CcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence            987632111              123478999998888766553

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=98.73  E-value=2.7e-06  Score=81.07  Aligned_cols=134  Identities=10%  Similarity=0.092  Sum_probs=83.0

Q ss_pred             EEEEECCCeEEEEECCCCceEEEEecCCC----------CCCce--------------------------EEEEEcCCCC
Q psy14511        211 TLAVALDTSVYTWNTKTNKTQLLVEYPTY----------DNAYI--------------------------SCVAWKPRTT  254 (488)
Q Consensus       211 ~~~~~~d~~v~iw~~~~~~~~~~~~~~~~----------~~~~i--------------------------~~~~~~~~~~  254 (488)
                      ++.+..+|.++++|..+++.+-...+...          ...++                          ..++++|+..
T Consensus       319 v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g  398 (571)
T 2ad6_A          319 LSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESR  398 (571)
T ss_dssp             EEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTT
T ss_pred             EEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCC
Confidence            44566788999999999987766554210          00111                          2467888877


Q ss_pred             eEEEEeC------------------------------------CCCcEEEEECCcceeeeeeccccccE-EEEEecCCEE
Q psy14511        255 DLAVTNT------------------------------------CTEYIDLWHEQEERLIQKLRTHMHQV-IAMCWNGNLL  297 (488)
Q Consensus       255 ~l~~~~~------------------------------------~~~~i~i~d~~~~~~~~~~~~~~~~v-~~~~~~~~~l  297 (488)
                      .+++...                                    .++.|..||..+++.+.++....... ..+...+..+
T Consensus       399 ~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v  478 (571)
T 2ad6_A          399 TLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLV  478 (571)
T ss_dssp             EEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEE
T ss_pred             EEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccceeEEECCCEE
Confidence            7777521                                    35789999999988877765322111 1233357788


Q ss_pred             EEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe
Q psy14511        298 SCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS  344 (488)
Q Consensus       298 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~  344 (488)
                      +.++.||.++.+|.++++..-.........-.-+.+..+|+.++...
T Consensus       479 ~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv~~~  525 (571)
T 2ad6_A          479 WYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYIGSM  525 (571)
T ss_dssp             EEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred             EEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEEEEE
Confidence            88999999999999987643333222211112234557887665544

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=98.73  E-value=1.4e-05  Score=76.14  Aligned_cols=176  Identities=10%  Similarity=0.015  Sum_probs=107.6

Q ss_pred             EEEEcCCCCeEEEEeCC-------------------C----CcEEEEECCcceeeeeecc--cc--------ccEEE-EE
Q psy14511        246 CVAWKPRTTDLAVTNTC-------------------T----EYIDLWHEQEERLIQKLRT--HM--------HQVIA-MC  291 (488)
Q Consensus       246 ~~~~~~~~~~l~~~~~~-------------------~----~~i~i~d~~~~~~~~~~~~--~~--------~~v~~-~~  291 (488)
                      .+++.|+...++++.+.                   |    +.|..+|..+++.+..++.  |.        .++.. ..
T Consensus       250 ~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~  329 (582)
T 1flg_A          250 SASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYK  329 (582)
T ss_dssp             CCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEE
T ss_pred             CceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeee
Confidence            35677777788877321                   2    5899999999998877653  21        22222 11


Q ss_pred             -ecC---CEEEEeecCCeEEEEECcCCCccceeeecC------------CccE---------------------------
Q psy14511        292 -WNG---NLLSCGTIGGNILHYDVRTHSDYPTAITRE------------GDVV---------------------------  328 (488)
Q Consensus       292 -~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~------------~~~i---------------------------  328 (488)
                       .+|   ..++.++.+|.++++|.++++.........            ..++                           
T Consensus       330 ~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~  409 (582)
T 1flg_A          330 AKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFL  409 (582)
T ss_dssp             CSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTT
T ss_pred             cCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCc
Confidence             246   378889999999999998865321111110            0000                           


Q ss_pred             -----EEEEEccCCcEEEEEe----------------------------------cCeEEEEECCCCCCCcccceeee--
Q psy14511        329 -----CGLKWSPNGRYLASGS----------------------------------NNTVKIWDFRQLDAKRPLGLIVP--  367 (488)
Q Consensus       329 -----~~~~~s~~~~~l~~~~----------------------------------d~~i~iwd~~~~~~~~~~~~~~~--  367 (488)
                           ..++++|+..++++..                                  ++.|.-||+.+++..-.......  
T Consensus       410 Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~  489 (582)
T 1flg_A          410 GGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLW  489 (582)
T ss_dssp             CSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCC
T ss_pred             cccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCc
Confidence                 1346666655444321                                  37788899988864422222111  


Q ss_pred             --eecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccE-EEEEEcCCCCE-EEEE
Q psy14511        368 --KLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERI-LSAVLSPDQTC-VAAA  423 (488)
Q Consensus       368 --~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v-~~~~~s~~~~~-l~t~  423 (488)
                        .....+..+++  |+.|+.++.||.++|+.+.+++...... .-+.|..+|+. +++.
T Consensus       490 ~g~~~tagglvf~--g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~~~  547 (582)
T 1flg_A          490 AGVLATAGNLVFT--GTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLGVT  547 (582)
T ss_dssp             SCCEEETTTEEEE--ECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred             ccceEeCCCEEEE--ECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEEEEEE
Confidence              33344666777  7889999999999999998887543321 23566678874 4443

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=98.72  E-value=1.4e-05  Score=79.07  Aligned_cols=62  Identities=15%  Similarity=0.116  Sum_probs=43.4

Q ss_pred             ccCc-eEEEEEEc-cCCcEEEEec--C----CeEEEEecccc-CcCCCcccccccccceeEEEEecCCCeEEeeeC
Q psy14511         34 REGD-VVCGLKWS-PNGRYLASGS--N----NTVKIWDFRQL-DAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGG  100 (488)
Q Consensus        34 ~h~~-~V~~l~~s-p~g~~las~~--d----~~i~vwd~~~~-~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~  100 (488)
                      +|.- .+...+|| |||++||.+.  +    ..|+++|+.++ +....  .+   ......+.|+|||+.|+.+..
T Consensus       170 ~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~--~~---~~~~~~~~WspDg~~l~y~~~  240 (751)
T 2xe4_A          170 GKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD--KV---SGTNGEIVWGPDHTSLFYVTK  240 (751)
T ss_dssp             TCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC--CE---EEECSCCEECSSTTEEEEEEE
T ss_pred             CCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc--cc---cCceeeEEEecCCCEEEEEEE
Confidence            3443 68899999 9999999764  2    35999999986 42111  11   122457899999998888764

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=98.70  E-value=0.0001  Score=64.58  Aligned_cols=222  Identities=9%  Similarity=-0.015  Sum_probs=137.0

Q ss_pred             EEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCc----ceeeeeecccccc
Q psy14511        211 TLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE----ERLIQKLRTHMHQ  286 (488)
Q Consensus       211 ~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~----~~~~~~~~~~~~~  286 (488)
                      ++..+....|+..++.+.+...+..    ....+..++|++.++.|+.+....+.|..+++..    ......+......
T Consensus         3 ~ll~~~~~~I~~i~~~~~~~~~~~~----~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~   78 (316)
T 1ijq_A            3 YLFFTNRHEVRKMTLDRSEYTSLIP----NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQA   78 (316)
T ss_dssp             EEEEECBSSEEEEETTSCCCEEEEC----SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSC
T ss_pred             EEEEECCCeEEEEECCCcceEehhc----CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCC
Confidence            4555666789999999877655543    3456789999998877877746678999999876    2222222222122


Q ss_pred             EEEEEe--cC-CEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe--c-CeEEEEECCCCCCCc
Q psy14511        287 VIAMCW--NG-NLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--N-NTVKIWDFRQLDAKR  360 (488)
Q Consensus       287 v~~~~~--~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--d-~~i~iwd~~~~~~~~  360 (488)
                      ...+++  .+ ++.++-...+.|.++++.... ..............++++|.+..|..+.  . +.|...++.......
T Consensus        79 p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~-~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~  157 (316)
T 1ijq_A           79 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK-RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS  157 (316)
T ss_dssp             CCEEEEETTTTEEEEEETTTTEEEEEETTSSS-EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEE
T ss_pred             cCEEEEeecCCeEEEEECCCCEEEEEeCCCCc-eEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEE
Confidence            344554  34 455555677899999987532 2222333334578999999766555544  3 688888876432111


Q ss_pred             c----ccee-eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEee---ccccEEEEEEcCCCCEEEEEeCCCcEEEE
Q psy14511        361 P----LGLI-VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKI---HQERILSAVLSPDQTCVAAASADETISIW  432 (488)
Q Consensus       361 ~----~~~~-~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~t~~~dg~v~iw  432 (488)
                      .    +... -.++++++..|+.+ ....+.|..+|+... ....+..   .-.....+++. .+..+++-...+.|..+
T Consensus       158 ~~~~~~~~P~gla~d~~~~~lY~~-D~~~~~I~~~d~dg~-~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~  234 (316)
T 1ijq_A          158 LVTENIQWPNGITLDLLSGRLYWV-DSKLHSISSIDVNGG-NRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSA  234 (316)
T ss_dssp             EECSSCSCEEEEEEETTTTEEEEE-ETTTTEEEEEETTSC-SCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEE
T ss_pred             EEECCCCCceEEEEeccCCEEEEE-ECCCCeEEEEecCCC-ceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEE
Confidence            1    1111 11888888877775 456789999998743 3333321   12346778874 45556666677889999


Q ss_pred             ecCCCCcc
Q psy14511        433 NCFPRDKK  440 (488)
Q Consensus       433 ~~~~~~~~  440 (488)
                      +..+++..
T Consensus       235 ~~~~g~~~  242 (316)
T 1ijq_A          235 NRLTGSDV  242 (316)
T ss_dssp             ETTTCCCC
T ss_pred             eCCCCcce
Confidence            98776654

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=98.66  E-value=6.9e-05  Score=65.43  Aligned_cols=217  Identities=15%  Similarity=0.081  Sum_probs=131.5

Q ss_pred             CceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecC--CeEEEEECcCCCcc
Q psy14511        242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIG--GNILHYDVRTHSDY  317 (488)
Q Consensus       242 ~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d--g~i~i~d~~~~~~~  317 (488)
                      .....++|+++++.+++- ..++.|..||.... ....+. .......+++  +++++++....  ..|..+|..+++ .
T Consensus        32 ~~pegia~~~~g~lyv~d-~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~-~  107 (306)
T 2p4o_A           32 TFLENLASAPDGTIFVTN-HEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGT-V  107 (306)
T ss_dssp             CCEEEEEECTTSCEEEEE-TTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSC-E
T ss_pred             CCcceEEECCCCCEEEEe-CCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCe-E
Confidence            467889999998855555 67899999997753 333332 2345777888  56765554332  246677766543 2


Q ss_pred             ceeee-cCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCC--CC---------cccce--eeeeecCCCCEEEEEccC
Q psy14511        318 PTAIT-REGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLD--AK---------RPLGL--IVPKLKREGRELVTSHGK  382 (488)
Q Consensus       318 ~~~~~-~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~--~~---------~~~~~--~~~~~~~~~~~l~~~~g~  382 (488)
                      ..... ........++..+++..+++.. ++.|.++|.....  ..         .....  ....++++++.++++ ..
T Consensus       108 ~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~-d~  186 (306)
T 2p4o_A          108 ETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVS-NT  186 (306)
T ss_dssp             EEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEE-ET
T ss_pred             EEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEEEE-eC
Confidence            11111 1222345556666665555544 4899999976431  10         00011  122348888877775 56


Q ss_pred             CCCeEEEEeCCC-cce--eEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccc--ccc-ccCCcceEEee-
Q psy14511        383 QDCSLKMWEYPR-LHL--IEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKR--KAR-QVGSGSSLEFA-  455 (488)
Q Consensus       383 ~~~~i~i~d~~~-~~~--~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~--~~~-~~~~v~~~~~s-  455 (488)
                      ..+.|..+++.. ++.  ...+. .......+++.++|+++++....+.|.+++.. ++...  ... ......+++|. 
T Consensus       187 ~~~~I~~~~~~~~g~~~~~~~~~-~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g  264 (306)
T 2p4o_A          187 EKMLLLRIPVDSTDKPGEPEIFV-EQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQ  264 (306)
T ss_dssp             TTTEEEEEEBCTTSCBCCCEEEE-ESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEECC
T ss_pred             CCCEEEEEEeCCCCCCCccEEEe-ccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEEEec
Confidence            678999999864 321  12221 11345678999999887777778899999975 44422  122 23557899998 


Q ss_pred             --cCCCceEEEE
Q psy14511        456 --ILKQPVSLTA  465 (488)
Q Consensus       456 --~~~~~~~~~~  465 (488)
                        |++..+.+..
T Consensus       265 ~~~d~~~LyVt~  276 (306)
T 2p4o_A          265 TEGDCTAIYVVT  276 (306)
T ss_dssp             STTTTTEEEEEE
T ss_pred             ccCCCCEEEEEC
Confidence              8877765544

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=98.65  E-value=0.00069  Score=69.77  Aligned_cols=221  Identities=11%  Similarity=0.079  Sum_probs=126.3

Q ss_pred             CcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCC--------------------------
Q psy14511        209 HDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTC--------------------------  262 (488)
Q Consensus       209 ~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~--------------------------  262 (488)
                      +.++ +..++.+++..++.-+.....+++  -...+..++++|+.+.+++..+.                          
T Consensus       707 ~g~v-~~~~~~LrI~~i~~~~~~~~~~ip--L~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  783 (1158)
T 3ei3_A          707 DSLA-LANNSTLTIGTIDEIQKLHIRTVP--LYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSV  783 (1158)
T ss_dssp             TEEE-EECSSCEEEEEECCSSSEEEEEEE--CSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEE
T ss_pred             CcEE-EEcCCceEEEEecccCCeeEEEEe--CCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcc
Confidence            3344 445566888887654433333333  34577888888887766554211                          


Q ss_pred             ----------------------CCcEEEEECCcceeeeeeccc-cccEEEEEe----c--CCEEEEee----------cC
Q psy14511        263 ----------------------TEYIDLWHEQEERLIQKLRTH-MHQVIAMCW----N--GNLLSCGT----------IG  303 (488)
Q Consensus       263 ----------------------~~~i~i~d~~~~~~~~~~~~~-~~~v~~~~~----~--~~~l~~~~----------~d  303 (488)
                                            .+.|++.|..+.+.+..++-. ...+.+++.    +  ..+++.|+          ..
T Consensus       784 ~~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~  863 (1158)
T 3ei3_A          784 SSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQ  863 (1158)
T ss_dssp             CCCCCC----------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCC
T ss_pred             cccccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCc
Confidence                                  123566666655555444321 223344443    2  46888876          35


Q ss_pred             CeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcc-ccee----eeeecCCCCEEEE
Q psy14511        304 GNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRP-LGLI----VPKLKREGRELVT  378 (488)
Q Consensus       304 g~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~-~~~~----~~~~~~~~~~l~~  378 (488)
                      |.|++|++...+-.........+++++++-- +| +|+++-..++++|++...+..+. ...+    .......+.++++
T Consensus       864 Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~-~g-~Lla~ig~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~v  941 (1158)
T 3ei3_A          864 GRIVVFQYSDGKLQTVAEKEVKGAVYSMVEF-NG-KLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILV  941 (1158)
T ss_dssp             EEEEEEEEETTEEEEEEEEEESSCEEEEEEE-TT-EEEEEETTEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEE
T ss_pred             eEEEEEEEECCEEEEEEEEEcCCcCEEEeee-CC-EEEEEcCCEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEE
Confidence            7899999974322222223345678877643 45 56666678999999986542221 1111    1122334667777


Q ss_pred             EccCCCCeEEEE--eCCCcceeEEEe-eccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCC
Q psy14511        379 SHGKQDCSLKMW--EYPRLHLIEELK-IHQERILSAVLSPDQTCVAAASADETISIWNCFPR  437 (488)
Q Consensus       379 ~~g~~~~~i~i~--d~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~  437 (488)
                        |..-..+.++  +....+....-+ .+...++++.|-.+ ..++.+..+|++.+....+.
T Consensus       942 --gD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~-~t~l~aD~~gNl~vl~~~~~ 1000 (1158)
T 3ei3_A          942 --GDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDD-DNFLGAENAFNLFVCQKDSA 1000 (1158)
T ss_dssp             --EESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEET-TEEEEEETTSEEEEEEECTT
T ss_pred             --EEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEcc-CcEEEEcCCCcEEEEecCCC
Confidence              4555555554  444333332222 23456888888655 46778999999999988763

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=98.64  E-value=1.1e-05  Score=78.86  Aligned_cols=112  Identities=13%  Similarity=0.102  Sum_probs=67.7

Q ss_pred             CCceEEEeecCC-----------eEEEEEcccCcccce-ee-cccCceEEEEEEccCCcEEEEec--CCeEEEEeccccC
Q psy14511          4 NGNLLSCGTIGG-----------NILHYDVRTHSDYPT-AI-TREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLD   68 (488)
Q Consensus         4 dg~~la~g~~dg-----------~i~iwd~~~~~~~~~-~~-~~h~~~V~~l~~sp~g~~las~~--d~~i~vwd~~~~~   68 (488)
                      +|++++.|+.++           .+.+||..+++-... .+ ..+.....++++.++|++++.|+  +..+.+||..+.+
T Consensus       197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~  276 (656)
T 1k3i_A          197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDS  276 (656)
T ss_dssp             TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTE
T ss_pred             CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCc
Confidence            788888887543           688999988763211 11 22333344577889999999998  5789999988643


Q ss_pred             cCCCcccccccccceeEEEEecCCCeEEeeeCCc---ccceEEEEecCCCee
Q psy14511         69 AKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGI---CDQTVRLWNSMNGKE  117 (488)
Q Consensus        69 ~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~---~d~~i~vwd~~~~~~  117 (488)
                      -. .+..+.... .-.+++..++++.++..|...   .-..+.+||..+++.
T Consensus       277 W~-~~~~~~~~R-~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W  326 (656)
T 1k3i_A          277 WI-PGPDMQVAR-GYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTW  326 (656)
T ss_dssp             EE-ECCCCSSCC-SSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEE
T ss_pred             ee-ECCCCCccc-cccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcc
Confidence            22 221221111 113445567887655555220   015688999877653

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=98.64  E-value=4.4e-06  Score=82.73  Aligned_cols=109  Identities=12%  Similarity=0.038  Sum_probs=68.7

Q ss_pred             cCCceEEEeec-C----CeEEEEEcccC-cccceeecccCceEEEEEEccCCcEEEEec-C-----CeEEEEeccccCcC
Q psy14511          3 WNGNLLSCGTI-G----GNILHYDVRTH-SDYPTAITREGDVVCGLKWSPNGRYLASGS-N-----NTVKIWDFRQLDAK   70 (488)
Q Consensus         3 ~dg~~la~g~~-d----g~i~iwd~~~~-~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d-----~~i~vwd~~~~~~~   70 (488)
                      .||++||.+.. +    .+|+++|+.++ +.+...+..   ....++|+|||+.|+... |     ..|.++++.++...
T Consensus       184 PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~---~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~  260 (751)
T 2xe4_A          184 PEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSG---TNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSE  260 (751)
T ss_dssp             TTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEE---ECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGG
T ss_pred             CCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccC---ceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchh
Confidence            79999985543 2    35999999988 643322322   234689999999888776 3     36888888764322


Q ss_pred             C-CcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCC
Q psy14511         71 R-PQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNG  115 (488)
Q Consensus        71 ~-~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~  115 (488)
                      . .+.. ..+......+.|+|||++|+..........|.++|+.++
T Consensus       261 ~~lv~~-~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~  305 (751)
T 2xe4_A          261 DVCLYE-EHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG  305 (751)
T ss_dssp             CEEEEE-CCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred             cEEEEe-cCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence            1 1211 122234567899999999887764212445666666543

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=98.63  E-value=1.2e-05  Score=76.56  Aligned_cols=192  Identities=13%  Similarity=0.079  Sum_probs=116.8

Q ss_pred             CCcEEEEEC-CCeEEEEEC-CCCceEEEEecCCCCC--------CceEEEEEcCCCCe----EEEEeCCCCcEEEEECCc
Q psy14511        208 YHDTLAVAL-DTSVYTWNT-KTNKTQLLVEYPTYDN--------AYISCVAWKPRTTD----LAVTNTCTEYIDLWHEQE  273 (488)
Q Consensus       208 ~~~~~~~~~-d~~v~iw~~-~~~~~~~~~~~~~~~~--------~~i~~~~~~~~~~~----l~~~~~~~~~i~i~d~~~  273 (488)
                      ++.+++++. ++.|.-+|. .+++.+-.........        .....++++|.+..    ++++ +.++.|..+|..+
T Consensus        62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~-t~dg~l~AlDa~T  140 (599)
T 1w6s_A           62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKT-QLDGNVAALNAET  140 (599)
T ss_dssp             TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEE-CTTSEEEEEETTT
T ss_pred             CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEE-cCCCEEEEEECCC
Confidence            466777777 899999999 8998876665432000        01123556444444    7777 8899999999999


Q ss_pred             ceeeeeeccccc----cEE-EEEecCCEEEEee------cCCeEEEEECcCCCccceeeecCCc----------------
Q psy14511        274 ERLIQKLRTHMH----QVI-AMCWNGNLLSCGT------IGGNILHYDVRTHSDYPTAITREGD----------------  326 (488)
Q Consensus       274 ~~~~~~~~~~~~----~v~-~~~~~~~~l~~~~------~dg~i~i~d~~~~~~~~~~~~~~~~----------------  326 (488)
                      ++.+........    .+. .....+..+++++      .+|.|+-+|.++++..-........                
T Consensus       141 G~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~  220 (599)
T 1w6s_A          141 GETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHY  220 (599)
T ss_dssp             CCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGG
T ss_pred             CCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccc
Confidence            988776543210    111 1112234555555      3799999999987643222111100                


Q ss_pred             --------------------cE-EEEEEccCCcEEEEEe-c----------------CeEEEEECCCCCCCccccee---
Q psy14511        327 --------------------VV-CGLKWSPNGRYLASGS-N----------------NTVKIWDFRQLDAKRPLGLI---  365 (488)
Q Consensus       327 --------------------~i-~~~~~s~~~~~l~~~~-d----------------~~i~iwd~~~~~~~~~~~~~---  365 (488)
                                          .+ ..+++.++...++.+. +                +.|.-+|.++++..-..+..   
T Consensus       221 g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d  300 (599)
T 1w6s_A          221 GQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHD  300 (599)
T ss_dssp             CCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTC
T ss_pred             cccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCc
Confidence                                00 1345666666666665 3                27888888887653222211   


Q ss_pred             -----------eeeec-CCCC---EEEEEccCCCCeEEEEeCCCcceeEEEe
Q psy14511        366 -----------VPKLK-REGR---ELVTSHGKQDCSLKMWEYPRLHLIEELK  402 (488)
Q Consensus       366 -----------~~~~~-~~~~---~l~~~~g~~~~~i~i~d~~~~~~~~~~~  402 (488)
                                 ..... .+|+   .++.  +..+|.++++|..+|+++....
T Consensus       301 ~wd~d~~~~p~l~d~~~~~G~~~~~v~~--~~~~G~l~~lD~~tG~~lw~~~  350 (599)
T 1w6s_A          301 EWDYAGVNVMMLSEQKDKDGKARKLLTH--PDRNGIVYTLDRTDGALVSANK  350 (599)
T ss_dssp             SSCCCCCCCCEEEEEECTTSCEEEEEEE--ECTTSEEEEEETTTCCEEEEEE
T ss_pred             cccccCCCccEEEeccccCCcEEEEEEE--ECCCcEEEEEECCCCCEeeccc
Confidence                       01111 4563   4444  6889999999999999887654

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=98.63  E-value=0.00013  Score=63.70  Aligned_cols=217  Identities=10%  Similarity=-0.032  Sum_probs=125.7

Q ss_pred             eeeeeeCC-CcEEEEE-CCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCC-cEEEEECCcceee
Q psy14511        201 TSGLDWGY-HDTLAVA-LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTE-YIDLWHEQEERLI  277 (488)
Q Consensus       201 ~~~~~~~~-~~~~~~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~-~i~i~d~~~~~~~  277 (488)
                      ...+.+++ +.++.+. .++.|..||.... .......    ...+..+++.++++.+++....++ .|..++..+++..
T Consensus        34 pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~~----~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~  108 (306)
T 2p4o_A           34 LENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHATV----EGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVE  108 (306)
T ss_dssp             EEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEEC----SSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEE
T ss_pred             cceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEeC----CCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEE
Confidence            34455543 4566666 7889999998764 3333332    346889999999985554412222 4666777666543


Q ss_pred             eeecc-ccccEEEEE-ecCCEE-EEeecCCeEEEEECcCCCccce---------eeecCCccEEEEEEccCCcEEEEEe-
Q psy14511        278 QKLRT-HMHQVIAMC-WNGNLL-SCGTIGGNILHYDVRTHSDYPT---------AITREGDVVCGLKWSPNGRYLASGS-  344 (488)
Q Consensus       278 ~~~~~-~~~~v~~~~-~~~~~l-~~~~~dg~i~i~d~~~~~~~~~---------~~~~~~~~i~~~~~s~~~~~l~~~~-  344 (488)
                      ..... .......++ +.+..+ ++-..++.|+.+|...+.....         .....-...+.+  +|+++.|..+. 
T Consensus       109 ~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~  186 (306)
T 2p4o_A          109 TLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNT  186 (306)
T ss_dssp             EEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEET
T ss_pred             EEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeC
Confidence            22211 111223333 344444 4444588999999764311110         000111234555  88998777776 


Q ss_pred             c-CeEEEEECCC-CCC--Cccccee--e--eeecCCCCEEEEEccCCCCeEEEEeCCCcceeE--EEeeccccEEEEEEc
Q psy14511        345 N-NTVKIWDFRQ-LDA--KRPLGLI--V--PKLKREGRELVTSHGKQDCSLKMWEYPRLHLIE--ELKIHQERILSAVLS  414 (488)
Q Consensus       345 d-~~i~iwd~~~-~~~--~~~~~~~--~--~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~--~~~~~~~~v~~~~~s  414 (488)
                      . +.|..+++.. +..  ...+...  .  .++.++|+..++  ....+.|.++|.. ++...  .+...-...++++|.
T Consensus       187 ~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va--~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~  263 (306)
T 2p4o_A          187 EKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGA--THIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFG  263 (306)
T ss_dssp             TTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEE--CBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEEC
T ss_pred             CCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEE--eCCCCeEEEECCC-CCEEEEeecccccCCceEEEEe
Confidence            3 8999999875 221  1111111  1  188899987666  4567889999975 65532  222223468999999


Q ss_pred             ---CCCCEEEEEeCCC
Q psy14511        415 ---PDQTCVAAASADE  427 (488)
Q Consensus       415 ---~~~~~l~t~~~dg  427 (488)
                         ||++.|..++..+
T Consensus       264 g~~~d~~~LyVt~~~~  279 (306)
T 2p4o_A          264 QTEGDCTAIYVVTNGG  279 (306)
T ss_dssp             CSTTTTTEEEEEECTT
T ss_pred             cccCCCCEEEEECCCC
Confidence               8987777666543

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=98.62  E-value=0.00019  Score=62.74  Aligned_cols=223  Identities=9%  Similarity=-0.007  Sum_probs=129.1

Q ss_pred             CCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec--CCeEEEEeccccCcCCCcccccccccceeEEEEecC
Q psy14511         14 GGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPW   91 (488)
Q Consensus        14 dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~--d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~   91 (488)
                      ...|+..|+.........+........+++|.+.+..|....  .+.|..++.++......+  ....-.....+++.+.
T Consensus        12 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~--~~~~l~~p~glavd~~   89 (318)
T 3sov_A           12 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNV--VVSGLLSPDGLACDWL   89 (318)
T ss_dssp             EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEE--EEECCSCCCEEEEETT
T ss_pred             cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEE--EcCCCCCccEEEEEcC
Confidence            568999999876422222223334577899999665555554  789999998764221111  1112235678889886


Q ss_pred             CCeEEeeeCCcccceEEEEecCCCeeeeeee-cCCCccccccccccccccceeEEEEEeeeeccccceecccccccccee
Q psy14511         92 EPTLLATGGGICDQTVRLWNSMNGKEKCHVK-TDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQ  170 (488)
Q Consensus        92 ~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (488)
                      +..|+.+...  .+.|.+.+++... ...+. .......             .                           
T Consensus        90 ~g~ly~~d~~--~~~I~~~~~dG~~-~~~l~~~~~~~P~-------------g---------------------------  126 (318)
T 3sov_A           90 GEKLYWTDSE--TNRIEVSNLDGSL-RKVLFWQELDQPR-------------A---------------------------  126 (318)
T ss_dssp             TTEEEEEETT--TTEEEEEETTSCS-CEEEECSSCSSEE-------------E---------------------------
T ss_pred             CCeEEEEECC--CCEEEEEECCCCc-EEEEEeCCCCCcc-------------E---------------------------
Confidence            6677776653  7789999875432 21111 0000000             0                           


Q ss_pred             eecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEE--CCCeEEEEECCCCceEEEEecCCCCCCceEEEE
Q psy14511        171 FLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVA--LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVA  248 (488)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~  248 (488)
                                                     ..++...+.++.+.  ..+.|...++...........   .-...+.++
T Consensus       127 -------------------------------iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~---~l~~Pngla  172 (318)
T 3sov_A          127 -------------------------------IALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINS---EIYWPNGLT  172 (318)
T ss_dssp             -------------------------------EEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECS---SCSCEEEEE
T ss_pred             -------------------------------EEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEEC---CCCCccEEE
Confidence                                           00111123344443  246777777765433332221   234578999


Q ss_pred             EcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEec-CCEEEEeecCCeEEEEECcCCC
Q psy14511        249 WKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWN-GNLLSCGTIGGNILHYDVRTHS  315 (488)
Q Consensus       249 ~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~dg~i~i~d~~~~~  315 (488)
                      ++|++..|+.+-+..+.|..+|+..................++++ +.++++-...+.|..++..+++
T Consensus       173 vd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~  240 (318)
T 3sov_A          173 LDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGE  240 (318)
T ss_dssp             EETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred             EeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeCCEEEEEecCCCeEEEEECCCCC
Confidence            999888888885677899999987533222223233445666664 4455555567888888887654

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.60  E-value=0.00032  Score=63.60  Aligned_cols=226  Identities=9%  Similarity=-0.012  Sum_probs=142.3

Q ss_pred             CcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcc----eeeeeecccc
Q psy14511        209 HDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEE----RLIQKLRTHM  284 (488)
Q Consensus       209 ~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~----~~~~~~~~~~  284 (488)
                      ..++..+....|+..++.......+..    ....+..++|++.+..|+.+-...+.|+.+++...    .....+....
T Consensus        83 ~~~ll~~~~~~I~~i~l~~~~~~~~~~----~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~  158 (400)
T 3p5b_L           83 IAYLFFTNRHEVRKMTLDRSEYTSLIP----NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI  158 (400)
T ss_dssp             SCEEEEEETTEEEEECTTSCSCEEEEC----SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSC
T ss_pred             cceeEEeccceeEEEccCCcceeEecc----ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCC
Confidence            346666677899999998876655543    44578899999988888877466788988988652    1222232233


Q ss_pred             ccEEEEEe---cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe--c-CeEEEEECCCCCC
Q psy14511        285 HQVIAMCW---NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--N-NTVKIWDFRQLDA  358 (488)
Q Consensus       285 ~~v~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--d-~~i~iwd~~~~~~  358 (488)
                      .....+++   .+++.++-...+.|.+.++.... ....+...-.....++++|.+.+|+.+.  + +.|...++.....
T Consensus       159 ~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~-~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~  237 (400)
T 3p5b_L          159 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK-RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI  237 (400)
T ss_dssp             SCEEEEEEETTTTEEEEEETTTTEEEEECTTTCS-EEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSC
T ss_pred             CCcccEEEEecCCceEEEECCCCeEEEEeCCCCc-eEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCcc
Confidence            34455555   34555565667889999987542 2233333344578999999776666554  3 7888888875432


Q ss_pred             Ccccce----e-eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEee--ccccEEEEEEcCCCCEEEEEeCCCcEEE
Q psy14511        359 KRPLGL----I-VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKI--HQERILSAVLSPDQTCVAAASADETISI  431 (488)
Q Consensus       359 ~~~~~~----~-~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~t~~~dg~v~i  431 (488)
                      ...+..    . --++++++..|+.+ -...+.|..+|+........+..  .-....++++. .+..+.+-...+.|..
T Consensus       238 ~~~~~~~l~~P~glavd~~~~~lY~a-D~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~  315 (400)
T 3p5b_L          238 YSLVTENIQWPNGITLDLLSGRLYWV-DSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFS  315 (400)
T ss_dssp             EEEECSSCSCEEEEEEETTTTEEEEE-ETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEE
T ss_pred             EEEEECCCCceEEEEEEeCCCEEEEE-ECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEE
Confidence            221111    1 11888888888775 45678899999864433222222  22345677773 3455556667788999


Q ss_pred             EecCCCCccc
Q psy14511        432 WNCFPRDKKR  441 (488)
Q Consensus       432 w~~~~~~~~~  441 (488)
                      ++..+++...
T Consensus       316 ~~~~~G~~~~  325 (400)
T 3p5b_L          316 ANRLTGSDVN  325 (400)
T ss_dssp             EESSSCCCCE
T ss_pred             EEcCCCCceE
Confidence            9977776553

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.60  E-value=9.3e-05  Score=66.85  Aligned_cols=221  Identities=7%  Similarity=-0.039  Sum_probs=126.8

Q ss_pred             CCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec--CCeEEEEeccccCcCCCcccccccccceeEEEEecC
Q psy14511         14 GGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPW   91 (488)
Q Consensus        14 dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~--d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~   91 (488)
                      ...|+..++.... ...... .......++|++.+..|....  .+.|..++.+..... .+  ..........+++.+.
T Consensus        95 ~~~I~~i~~~~~~-~~~~~~-~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~-~~--~~~~~~~p~glavd~~  169 (386)
T 3v65_B           95 RIDIRQVLPHRSE-YTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE-EV--VSTGLESPGGLAVDWV  169 (386)
T ss_dssp             BSCEEEECTTSCC-CEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEE-EE--ECSSCSCCCCEEEETT
T ss_pred             CccceeeccCCCc-EEEEec-CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcE-EE--EeCCCCCccEEEEEeC
Confidence            4568888887654 323333 334578999998666665554  789999998753311 11  1112234567888887


Q ss_pred             CCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceee
Q psy14511         92 EPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQF  171 (488)
Q Consensus        92 ~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (488)
                      +..|+.+...  .+.|.+.+++.......+........                                          
T Consensus       170 ~g~lY~~d~~--~~~I~~~~~dg~~~~~l~~~~l~~P~------------------------------------------  205 (386)
T 3v65_B          170 HDKLYWTDSG--TSRIEVANLDGAHRKVLLWQSLEKPR------------------------------------------  205 (386)
T ss_dssp             TTEEEEEETT--TTEEEECBTTSCSCEEEECSSCSCEE------------------------------------------
T ss_pred             CCeEEEEcCC--CCeEEEEeCCCCceEEeecCCCCCCc------------------------------------------
Confidence            7777776653  67788877653321111110000000                                          


Q ss_pred             ecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEE-CC-CeEEEEECCCCceEEEEecCCCCCCceEEEEE
Q psy14511        172 LRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVA-LD-TSVYTWNTKTNKTQLLVEYPTYDNAYISCVAW  249 (488)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d-~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~  249 (488)
                                                   -..++...+.++.+. .. +.|..+++...........   .-.....+++
T Consensus       206 -----------------------------giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~---~~~~PnGlav  253 (386)
T 3v65_B          206 -----------------------------AIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADT---HLFWPNGLTI  253 (386)
T ss_dssp             -----------------------------EEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECS---SCSCEEEEEE
T ss_pred             -----------------------------EEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEEC---CCCCeeeEEE
Confidence                                         000111223344433 33 6788888765544333321   3345789999


Q ss_pred             cCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe-cCCEEEEeecCCeEEEEECcCCC
Q psy14511        250 KPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW-NGNLLSCGTIGGNILHYDVRTHS  315 (488)
Q Consensus       250 ~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~  315 (488)
                      +|++..|+.+-...+.|..+|+........+.........+++ .+.++++-...+.|..++..+++
T Consensus       254 d~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~  320 (386)
T 3v65_B          254 DYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGK  320 (386)
T ss_dssp             EGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred             eCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEECCEEEEeeCCCCeEEEEECCCCc
Confidence            9988888888567788999998754333333323334556666 45555666667888888865543

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=98.58  E-value=1.2e-05  Score=78.45  Aligned_cols=176  Identities=10%  Similarity=0.074  Sum_probs=91.3

Q ss_pred             EEEEcCCCCeEEEEeCCC-----CcEEEEECCcceeeee-------eccccccEEEEEecCCEEEEeecC---------C
Q psy14511        246 CVAWKPRTTDLAVTNTCT-----EYIDLWHEQEERLIQK-------LRTHMHQVIAMCWNGNLLSCGTIG---------G  304 (488)
Q Consensus       246 ~~~~~~~~~~l~~~~~~~-----~~i~i~d~~~~~~~~~-------~~~~~~~v~~~~~~~~~l~~~~~d---------g  304 (488)
                      +++..++++.++++|..+     ..+.+||..+.+-...       +...... ..+..++..++.++.+         .
T Consensus       291 s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~-~~~~~~~~iyv~Gg~~g~~~~~~~~~  369 (656)
T 1k3i_A          291 SSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQ-GLYRSDNHAWLFGWKKGSVFQAGPST  369 (656)
T ss_dssp             EEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTT-GGGTTTCSCCEEECGGGCEEECCSSS
T ss_pred             ceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccccc-ceeecCCceEEEECCCCcEEEecCcc
Confidence            344556777777773233     4688888877543221       0000000 0001134444555443         4


Q ss_pred             eEEEEECcCCCccceeeecCC---------ccEEEEEEcc-CCcEEEEEe-cC-----------eEEEEECCCCCCCc--
Q psy14511        305 NILHYDVRTHSDYPTAITREG---------DVVCGLKWSP-NGRYLASGS-NN-----------TVKIWDFRQLDAKR--  360 (488)
Q Consensus       305 ~i~i~d~~~~~~~~~~~~~~~---------~~i~~~~~s~-~~~~l~~~~-d~-----------~i~iwd~~~~~~~~--  360 (488)
                      .+..||..+..- ......+.         ..-.++.|.. ++++++.|+ ++           .+.+||..+..-..  
T Consensus       370 ~v~~yd~~~~~w-~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~  448 (656)
T 1k3i_A          370 AMNWYYTSGSGD-VKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFA  448 (656)
T ss_dssp             EEEEEECSTTCE-EEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEEC
T ss_pred             ceeeeecCCcce-eecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEc
Confidence            567888876531 11111111         1123444443 778888876 22           67888876543211  


Q ss_pred             --c--cce-e-eeeecCCCCEEEEEccCCC-----------CeEEEEeCCCcceeE--EEeeccccEEEEEEcCCCCEEE
Q psy14511        361 --P--LGL-I-VPKLKREGRELVTSHGKQD-----------CSLKMWEYPRLHLIE--ELKIHQERILSAVLSPDQTCVA  421 (488)
Q Consensus       361 --~--~~~-~-~~~~~~~~~~l~~~~g~~~-----------~~i~i~d~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~  421 (488)
                        .  ... . .....|+++.+++  |+.+           ..+.+||..+.+-..  .+...........+.||++.++
T Consensus       449 ~~~mp~~R~~~~~~~l~~g~i~v~--GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v  526 (656)
T 1k3i_A          449 SNGLYFARTFHTSVVLPDGSTFIT--GGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFN  526 (656)
T ss_dssp             TTCCSSCCBSCEEEECTTSCEEEE--CCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEE
T ss_pred             cCCCCCCcccCCeEECCCCCEEEE--CCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEe
Confidence              1  111 1 1255679998888  4432           568999987754322  1111122223455679999999


Q ss_pred             EEeC
Q psy14511        422 AASA  425 (488)
Q Consensus       422 t~~~  425 (488)
                      .|+.
T Consensus       527 ~GG~  530 (656)
T 1k3i_A          527 GGGG  530 (656)
T ss_dssp             EECC
T ss_pred             cCCC
Confidence            9985

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=98.56  E-value=0.0003  Score=62.47  Aligned_cols=221  Identities=7%  Similarity=-0.040  Sum_probs=124.9

Q ss_pred             CCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec--CCeEEEEeccccCcCCCcccccccccceeEEEEecC
Q psy14511         14 GGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPW   91 (488)
Q Consensus        14 dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~--d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~   91 (488)
                      ...|+..++.... ....+.. ......++|++.+..|....  .+.|..++.++.... .+  ..........+++.+.
T Consensus        52 ~~~I~~i~~~g~~-~~~~~~~-~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~-~~--~~~~~~~p~glavd~~  126 (349)
T 3v64_C           52 RIDIRQVLPHRSE-YTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE-EV--VSTGLESPGGLAVDWV  126 (349)
T ss_dssp             BSCEEEECTTSCC-EEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-EE--ECSSCSCCCEEEEETT
T ss_pred             ccceEEEeCCCCe-eEEeecC-CCceEEEEEeccccEEEEEeccCCceEEEecCCCCce-EE--EeCCCCCccEEEEecC
Confidence            4457777776543 2222333 33478999998766666554  789999998753321 11  1112234578899887


Q ss_pred             CCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceee
Q psy14511         92 EPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQF  171 (488)
Q Consensus        92 ~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (488)
                      +..|+.+...  .+.|.+.+++................                                          
T Consensus       127 ~g~ly~~d~~--~~~I~~~~~dG~~~~~l~~~~l~~P~------------------------------------------  162 (349)
T 3v64_C          127 HDKLYWTDSG--TSRIEVANLDGAHRKVLLWQSLEKPR------------------------------------------  162 (349)
T ss_dssp             TTEEEEEETT--TTEEEEEETTSCSCEEEECTTCSCEE------------------------------------------
T ss_pred             CCeEEEEcCC--CCeEEEEcCCCCceEEEEeCCCCCcc------------------------------------------
Confidence            7777777653  77898888754321111110000000                                          


Q ss_pred             ecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEE-CC-CeEEEEECCCCceEEEEecCCCCCCceEEEEE
Q psy14511        172 LRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVA-LD-TSVYTWNTKTNKTQLLVEYPTYDNAYISCVAW  249 (488)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d-~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~  249 (488)
                                                   -..++...+.++.+. .. +.|..+++...........   .-.....+++
T Consensus       163 -----------------------------~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~---~~~~PnGla~  210 (349)
T 3v64_C          163 -----------------------------AIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADT---HLFWPNGLTI  210 (349)
T ss_dssp             -----------------------------EEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCS---SCSCEEEEEE
T ss_pred             -----------------------------eEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEEC---CCCCcceEEE
Confidence                                         000111223344333 33 6788887765433222211   3345789999


Q ss_pred             cCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe-cCCEEEEeecCCeEEEEECcCCC
Q psy14511        250 KPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW-NGNLLSCGTIGGNILHYDVRTHS  315 (488)
Q Consensus       250 ~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~  315 (488)
                      +|++..|+.+-...+.|..+++........+.........+++ .+.+.++-...+.|..++..+++
T Consensus       211 d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~  277 (349)
T 3v64_C          211 DYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGK  277 (349)
T ss_dssp             ETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred             eCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEECCEEEEecCCCCeEEEEEccCCC
Confidence            9988888888567788999998754332223222334455665 44555555566778888755543

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=98.53  E-value=0.00083  Score=64.61  Aligned_cols=103  Identities=9%  Similarity=-0.037  Sum_probs=66.4

Q ss_pred             eEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec--CCeEEEEeccccCcCCCccccccccccee
Q psy14511          7 LLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAKRPQVNNQCHLSAVK   84 (488)
Q Consensus         7 ~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~--d~~i~vwd~~~~~~~~~~~~~~~h~~~v~   84 (488)
                      +|+.+ ..+.|+..|+.+...........-.....|+|++.+..|..+.  ++.|..++++... ...+  ...-.....
T Consensus         8 ~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~-~~~v--~~~g~~~P~   83 (628)
T 4a0p_A            8 FLLFS-RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSA-LEHV--VEFGLDYPE   83 (628)
T ss_dssp             EEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEE--ECSSCSCCC
T ss_pred             EEEEE-eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCC-cEEE--EeCCCCCcc
Confidence            44443 5778999999875422111112334578999999777666654  7999999887532 2222  111123567


Q ss_pred             EEEEecCCCeEEeeeCCcccceEEEEecCCC
Q psy14511         85 AIAWCPWEPTLLATGGGICDQTVRLWNSMNG  115 (488)
Q Consensus        85 ~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~  115 (488)
                      .|++.+.+..|+.+...  .+.|.+.++...
T Consensus        84 GlAvD~~~~~LY~tD~~--~~~I~v~~~dG~  112 (628)
T 4a0p_A           84 GMAVDWLGKNLYWADTG--TNRIEVSKLDGQ  112 (628)
T ss_dssp             EEEEETTTTEEEEEETT--TTEEEEEETTST
T ss_pred             eEEEEeCCCEEEEEECC--CCEEEEEecCCC
Confidence            88898877778777664  788888887543

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=98.49  E-value=0.00034  Score=61.11  Aligned_cols=224  Identities=10%  Similarity=-0.001  Sum_probs=136.9

Q ss_pred             cEEEEECCCeEEEEECCCCc--eEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceee-eeecccccc
Q psy14511        210 DTLAVALDTSVYTWNTKTNK--TQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLI-QKLRTHMHQ  286 (488)
Q Consensus       210 ~~~~~~~d~~v~iw~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~-~~~~~~~~~  286 (488)
                      -++..+....|+.+++....  ......    .......++|++.+..|+.+-...+.|..+++...... ..+...-..
T Consensus         5 p~ll~~~~~~I~~i~l~~~~~~~~~~~~----~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~   80 (318)
T 3sov_A            5 PLLLYANRRDLRLVDATNGKENATIVVG----GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLS   80 (318)
T ss_dssp             CEEEEECEEEEEEEETTCTTSCCEEEEE----EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSC
T ss_pred             cEEEEEccCeEEEEECCCCceEEEEEec----CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCC
Confidence            35566667889999998764  222222    22356789999977777777467788999998765321 112111122


Q ss_pred             E--EEEEe-cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe--c-CeEEEEECCCCCCCc
Q psy14511        287 V--IAMCW-NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--N-NTVKIWDFRQLDAKR  360 (488)
Q Consensus       287 v--~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--d-~~i~iwd~~~~~~~~  360 (488)
                      .  .++.+ .+++.++-...+.|.++++.... ..............++++|.+..|+.+.  . +.|...++.......
T Consensus        81 p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~-~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~  159 (318)
T 3sov_A           81 PDGLACDWLGEKLYWTDSETNRIEVSNLDGSL-RKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFI  159 (318)
T ss_dssp             CCEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEE
T ss_pred             ccEEEEEcCCCeEEEEECCCCEEEEEECCCCc-EEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEE
Confidence            3  34444 34555665667899999987532 2222323445578999999766666554  2 788888876432211


Q ss_pred             ccce-e----eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecC
Q psy14511        361 PLGL-I----VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCF  435 (488)
Q Consensus       361 ~~~~-~----~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~  435 (488)
                      .... +    --++++++..|+.+ -...+.|..+|+........+.+.......+++.. +..+.+-...+.|..++..
T Consensus       160 ~~~~~l~~Pnglavd~~~~~lY~a-D~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~  237 (318)
T 3sov_A          160 IINSEIYWPNGLTLDYEEQKLYWA-DAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNKY  237 (318)
T ss_dssp             EECSSCSCEEEEEEETTTTEEEEE-ETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEETT
T ss_pred             EEECCCCCccEEEEeccCCEEEEE-ECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEECC
Confidence            1111 1    11889887777775 56678999999864332222232344567777753 3455555567889999987


Q ss_pred             CCCcc
Q psy14511        436 PRDKK  440 (488)
Q Consensus       436 ~~~~~  440 (488)
                      +++..
T Consensus       238 ~G~~~  242 (318)
T 3sov_A          238 TGEGL  242 (318)
T ss_dssp             TCCSC
T ss_pred             CCCce
Confidence            77654

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=98.46  E-value=5.1e-05  Score=66.87  Aligned_cols=193  Identities=7%  Similarity=-0.025  Sum_probs=120.3

Q ss_pred             CceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeec-------------------cccccEEEEEec--CCEEEEe
Q psy14511        242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLR-------------------THMHQVIAMCWN--GNLLSCG  300 (488)
Q Consensus       242 ~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~-------------------~~~~~v~~~~~~--~~~l~~~  300 (488)
                      ....+++++++++.++++ ..++.|..|+..+++......                   ........++++  +..|+.+
T Consensus        19 ~~p~~i~~d~~g~~l~v~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~   97 (322)
T 2fp8_A           19 YAPNSFTFDSTNKGFYTS-VQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIV   97 (322)
T ss_dssp             SCCCCEECCTTCSSEEEE-CTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEE
T ss_pred             CCceEEEEcCCCCEEEEE-cCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEE
Confidence            345678899998878877 888999999887643321110                   011346778774  4567777


Q ss_pred             ecCCeEEEEECcCCCccceeeec-----CCccEEEEEEcc-CCcEEEEEec------------------CeEEEEECCCC
Q psy14511        301 TIGGNILHYDVRTHSDYPTAITR-----EGDVVCGLKWSP-NGRYLASGSN------------------NTVKIWDFRQL  356 (488)
Q Consensus       301 ~~dg~i~i~d~~~~~~~~~~~~~-----~~~~i~~~~~s~-~~~~l~~~~d------------------~~i~iwd~~~~  356 (488)
                      ...+.+..+|..++.  ...+..     .......+++.| +|++.++...                  +.+..||..++
T Consensus        98 d~~~~i~~~d~~~g~--~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~  175 (322)
T 2fp8_A           98 DCYYHLSVVGSEGGH--ATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTK  175 (322)
T ss_dssp             ETTTEEEEECTTCEE--CEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTT
T ss_pred             ECCCCEEEEeCCCCE--EEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCC
Confidence            666668888876432  122211     113467899999 9987776432                  57888887655


Q ss_pred             CCCccccee----eeeecCCCCEEEEEccCCCCeEEEEeCCCcc--eeEEEeeccccEEEEEEcCCCCEEEEEeC-----
Q psy14511        357 DAKRPLGLI----VPKLKREGRELVTSHGKQDCSLKMWEYPRLH--LIEELKIHQERILSAVLSPDQTCVAAASA-----  425 (488)
Q Consensus       357 ~~~~~~~~~----~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~t~~~-----  425 (488)
                      +........    -.+++++++.++++ ....+.|..|++....  ....+....+ ...+++.++|+++++...     
T Consensus       176 ~~~~~~~~~~~p~gia~~~dg~~lyv~-d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~  253 (322)
T 2fp8_A          176 ETTLLLKELHVPGGAEVSADSSFVLVA-EFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGN  253 (322)
T ss_dssp             EEEEEEEEESCCCEEEECTTSSEEEEE-EGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSS
T ss_pred             EEEEeccCCccCcceEECCCCCEEEEE-eCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCccccc
Confidence            432211111    11899999977664 3456889999987421  1122221223 788999999987777654     


Q ss_pred             -----CCcEEEEecCCCCcc
Q psy14511        426 -----DETISIWNCFPRDKK  440 (488)
Q Consensus       426 -----dg~v~iw~~~~~~~~  440 (488)
                           .+.|..+|.. ++..
T Consensus       254 ~~~~~~~~v~~~d~~-G~~~  272 (322)
T 2fp8_A          254 MHGRVDPKGIKFDEF-GNIL  272 (322)
T ss_dssp             TTSCEEEEEEEECTT-SCEE
T ss_pred             ccCCCccEEEEECCC-CCEE
Confidence                 4567777764 4433

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=98.46  E-value=0.00018  Score=63.26  Aligned_cols=221  Identities=13%  Similarity=0.098  Sum_probs=127.9

Q ss_pred             EEEEECCCeEEEEECCCCceEEEEecCCC----------------CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcc
Q psy14511        211 TLAVALDTSVYTWNTKTNKTQLLVEYPTY----------------DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEE  274 (488)
Q Consensus       211 ~~~~~~d~~v~iw~~~~~~~~~~~~~~~~----------------~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~  274 (488)
                      +++...++.|..|+..+++..........                ....+..+++.+++..|+++ ...+.+..+|..++
T Consensus        33 l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~-d~~~~i~~~d~~~g  111 (322)
T 2fp8_A           33 FYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIV-DCYYHLSVVGSEGG  111 (322)
T ss_dssp             EEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEE-ETTTEEEEECTTCE
T ss_pred             EEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEE-ECCCCEEEEeCCCC
Confidence            77777889999999887654432211100                01357889999833355555 44555888887754


Q ss_pred             eeeeeec----c-ccccEEEEEec---CCEEEEeec-----------------CCeEEEEECcCCCccceeeecCCccEE
Q psy14511        275 RLIQKLR----T-HMHQVIAMCWN---GNLLSCGTI-----------------GGNILHYDVRTHSDYPTAITREGDVVC  329 (488)
Q Consensus       275 ~~~~~~~----~-~~~~v~~~~~~---~~~l~~~~~-----------------dg~i~i~d~~~~~~~~~~~~~~~~~i~  329 (488)
                      .. ..+.    + .......++++   |++.++-..                 ++.|..||..++. . ..+...-....
T Consensus       112 ~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~-~-~~~~~~~~~p~  188 (322)
T 2fp8_A          112 HA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKE-T-TLLLKELHVPG  188 (322)
T ss_dssp             EC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTE-E-EEEEEEESCCC
T ss_pred             EE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCE-E-EEeccCCccCc
Confidence            32 2221    1 11234566663   444444322                 3678888876543 1 11111112345


Q ss_pred             EEEEccCCcEEEEEe-c-CeEEEEECCCCCCC--ccccee--e--eeecCCCCEEEEEcc--------CCCCeEEEEeCC
Q psy14511        330 GLKWSPNGRYLASGS-N-NTVKIWDFRQLDAK--RPLGLI--V--PKLKREGRELVTSHG--------KQDCSLKMWEYP  393 (488)
Q Consensus       330 ~~~~s~~~~~l~~~~-d-~~i~iwd~~~~~~~--~~~~~~--~--~~~~~~~~~l~~~~g--------~~~~~i~i~d~~  393 (488)
                      .++++|+++.|..+. . +.|.+|++......  ..+...  .  .++.++|++.++..+        ...+.|..+|. 
T Consensus       189 gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~gP~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~-  267 (322)
T 2fp8_A          189 GAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPNPGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDE-  267 (322)
T ss_dssp             EEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSSEEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECT-
T ss_pred             ceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCCCCCeEECCCCCEEEEecCcccccccCCCccEEEEECC-
Confidence            799999999777665 3 89999998753211  111110  1  177888886666422        11466888886 


Q ss_pred             CcceeEEEeecc----ccEEEEEEcCCCCEEEEEeCCCcEEEEecCCC
Q psy14511        394 RLHLIEELKIHQ----ERILSAVLSPDQTCVAAASADETISIWNCFPR  437 (488)
Q Consensus       394 ~~~~~~~~~~~~----~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~  437 (488)
                      .++.+..+....    ..++.+++ .+++++++....+.|..+++...
T Consensus       268 ~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~~  314 (322)
T 2fp8_A          268 FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDKK  314 (322)
T ss_dssp             TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC---
T ss_pred             CCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEecccc
Confidence            477777765442    34666766 46666666667788999987643

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=98.45  E-value=0.00064  Score=59.46  Aligned_cols=228  Identities=9%  Similarity=-0.039  Sum_probs=128.5

Q ss_pred             eEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec--CCeEEEEecccc---CcCCCccccccccc
Q psy14511          7 LLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQL---DAKRPQVNNQCHLS   81 (488)
Q Consensus         7 ~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~--d~~i~vwd~~~~---~~~~~~~~~~~h~~   81 (488)
                      +|+.+. ...|+..|+.+.... ..+ ........++|++++..|..+.  ++.|..++..+.   .....+  ....-.
T Consensus         3 ~ll~~~-~~~I~~i~~~~~~~~-~~~-~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~--~~~~~~   77 (316)
T 1ijq_A            3 YLFFTN-RHEVRKMTLDRSEYT-SLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTV--ISRDIQ   77 (316)
T ss_dssp             EEEEEC-BSSEEEEETTSCCCE-EEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEE--ECSSCS
T ss_pred             EEEEEC-CCeEEEEECCCcceE-ehh-cCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEE--EeCCCC
Confidence            344444 456999999876532 333 2344578999999776665554  789999998751   111111  111223


Q ss_pred             ceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecc
Q psy14511         82 AVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQ  161 (488)
Q Consensus        82 ~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (488)
                      ....+++.+.+..|+.+...  .+.|.+.++........+........                                
T Consensus        78 ~p~glavd~~~~~ly~~d~~--~~~I~~~~~~g~~~~~~~~~~~~~P~--------------------------------  123 (316)
T 1ijq_A           78 APDGLAVDWIHSNIYWTDSV--LGTVSVADTKGVKRKTLFRENGSKPR--------------------------------  123 (316)
T ss_dssp             CCCEEEEETTTTEEEEEETT--TTEEEEEETTSSSEEEEEECTTCCEE--------------------------------
T ss_pred             CcCEEEEeecCCeEEEEECC--CCEEEEEeCCCCceEEEEECCCCCcc--------------------------------
Confidence            46788998766677776553  78899998754322111110000000                                


Q ss_pred             ccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEEC-C-CeEEEEECCCCceEEEEecCCC
Q psy14511        162 SKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVAL-D-TSVYTWNTKTNKTQLLVEYPTY  239 (488)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d-~~v~iw~~~~~~~~~~~~~~~~  239 (488)
                                                             -..++...+.++.+.. . +.|...++...........   
T Consensus       124 ---------------------------------------~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~---  161 (316)
T 1ijq_A          124 ---------------------------------------AIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE---  161 (316)
T ss_dssp             ---------------------------------------EEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECS---
T ss_pred             ---------------------------------------eEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEEC---
Confidence                                                   0001112334444443 2 6788887764433222221   


Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeec--cccccEEEEEec-CCEEEEeecCCeEEEEECcCCC
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLR--THMHQVIAMCWN-GNLLSCGTIGGNILHYDVRTHS  315 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~-~~~l~~~~~dg~i~i~d~~~~~  315 (488)
                      .-.....++++|++..|+.+-...+.|..+|+..........  ........++++ +.++++-...+.|..++..+++
T Consensus       162 ~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~ly~~d~~~~~V~~~~~~~g~  240 (316)
T 1ijq_A          162 NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGS  240 (316)
T ss_dssp             SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred             CCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEECCEEEEEECCCCeEEEEeCCCCc
Confidence            334678999999888888885677899999987532211111  122334566664 4455555567788888876654

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=98.39  E-value=0.00096  Score=58.68  Aligned_cols=135  Identities=13%  Similarity=0.145  Sum_probs=71.8

Q ss_pred             CCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEEC--Ccceeeeeeccccc
Q psy14511        208 YHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHE--QEERLIQKLRTHMH  285 (488)
Q Consensus       208 ~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~--~~~~~~~~~~~~~~  285 (488)
                      ++.+++++.++.|+.- .+.++.-......  ....+..+++.|++..++++ ...+..+-.|-  .+.+.+.  .....
T Consensus       132 ~~~~~~~~~~g~v~~S-~DgG~tW~~~~~~--~~~~~~~~~~~~~~~~~~~g-~~G~~~~S~d~gG~tW~~~~--~~~~~  205 (327)
T 2xbg_A          132 NGSAEMITNVGAIYRT-KDSGKNWQALVQE--AIGVMRNLNRSPSGEYVAVS-SRGSFYSTWEPGQTAWEPHN--RTTSR  205 (327)
T ss_dssp             TTEEEEEETTCCEEEE-SSTTSSEEEEECS--CCCCEEEEEECTTSCEEEEE-TTSSEEEEECTTCSSCEEEE--CCSSS
T ss_pred             CCCEEEEeCCccEEEE-cCCCCCCEEeecC--CCcceEEEEEcCCCcEEEEE-CCCcEEEEeCCCCCceeECC--CCCCC
Confidence            3456666666654332 2223322222221  45578899999998877766 44333333342  2222321  23445


Q ss_pred             cEEEEEe-cCCEEEEeecCCeEEEEECcCCCccceeee---cCCccEEEEEEccCCcEEEEEecCeE
Q psy14511        286 QVIAMCW-NGNLLSCGTIGGNILHYDVRTHSDYPTAIT---REGDVVCGLKWSPNGRYLASGSNNTV  348 (488)
Q Consensus       286 ~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---~~~~~i~~~~~s~~~~~l~~~~d~~i  348 (488)
                      .+..+.+ .+..++.++.+|.+++.+...+..-.....   .....+..+++.+++..++++.++.+
T Consensus       206 ~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i  272 (327)
T 2xbg_A          206 RLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGAL  272 (327)
T ss_dssp             CEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCE
T ss_pred             ccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCCeE
Confidence            6777777 223445566678877764221211111111   12234788899988888887766655

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.39  E-value=0.0012  Score=59.80  Aligned_cols=230  Identities=9%  Similarity=-0.034  Sum_probs=131.4

Q ss_pred             eEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec--CCeEEEEeccccCcCC-Ccccccccccce
Q psy14511          7 LLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAKR-PQVNNQCHLSAV   83 (488)
Q Consensus         7 ~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~--d~~i~vwd~~~~~~~~-~~~~~~~h~~~v   83 (488)
                      +|+.+ ....|+..|+.... ... +......+..|+|++.+..|..+.  .+.|+.+++....... ............
T Consensus        85 ~ll~~-~~~~I~~i~l~~~~-~~~-~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p  161 (400)
T 3p5b_L           85 YLFFT-NRHEVRKMTLDRSE-YTS-LIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP  161 (400)
T ss_dssp             EEEEE-ETTEEEEECTTSCS-CEE-EECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCE
T ss_pred             eeEEe-ccceeEEEccCCcc-eeE-eccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCc
Confidence            34433 35688888887664 222 333445688999999766666654  7899999886422101 111112123457


Q ss_pred             eEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecccc
Q psy14511         84 KAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSK  163 (488)
Q Consensus        84 ~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (488)
                      ..+++.+.+..|+.+...  .+.|.+.+++.......+.........                                 
T Consensus       162 ~glavD~~~~~lY~~d~~--~~~I~~~~~~g~~~~~l~~~~~~~P~~---------------------------------  206 (400)
T 3p5b_L          162 DGLAVDWIHSNIYWTDSV--LGTVSVADTKGVKRKTLFRENGSKPRA---------------------------------  206 (400)
T ss_dssp             EEEEEETTTTEEEEEETT--TTEEEEECTTTCSEEEEEECSSCCEEE---------------------------------
T ss_pred             ccEEEEecCCceEEEECC--CCeEEEEeCCCCceEEEEeCCCCCcce---------------------------------
Confidence            788998866677777663  788888887644322221111000000                                 


Q ss_pred             ccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEE--CCCeEEEEECCCCceEEEEecCCCCC
Q psy14511        164 RTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVA--LDTSVYTWNTKTNKTQLLVEYPTYDN  241 (488)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~v~iw~~~~~~~~~~~~~~~~~~  241 (488)
                                                            ..++...+.++.+.  ..+.|...++...........   .-
T Consensus       207 --------------------------------------iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~---~l  245 (400)
T 3p5b_L          207 --------------------------------------IVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE---NI  245 (400)
T ss_dssp             --------------------------------------EEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECS---SC
T ss_pred             --------------------------------------EEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEEC---CC
Confidence                                                  00111223344333  236777777765443333321   33


Q ss_pred             CceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecc--ccccEEEEEec-CCEEEEeecCCeEEEEECcCCC
Q psy14511        242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRT--HMHQVIAMCWN-GNLLSCGTIGGNILHYDVRTHS  315 (488)
Q Consensus       242 ~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~--~~~~v~~~~~~-~~~l~~~~~dg~i~i~d~~~~~  315 (488)
                      .....+++++++..|+.+-...+.|..+|+...........  .......++.+ +.++++-...+.|..+|..+++
T Consensus       246 ~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G~  322 (400)
T 3p5b_L          246 QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGS  322 (400)
T ss_dssp             SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEESSSCSEEEEESSSCC
T ss_pred             CceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecCCCCeEEEEEcCCCC
Confidence            56789999998888888856678899999875433222221  22344566664 4555566667888888876654

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=98.36  E-value=0.00018  Score=65.95  Aligned_cols=217  Identities=10%  Similarity=0.109  Sum_probs=123.6

Q ss_pred             CcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCC----cEEEEECCcceee--eeecc
Q psy14511        209 HDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTE----YIDLWHEQEERLI--QKLRT  282 (488)
Q Consensus       209 ~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~----~i~i~d~~~~~~~--~~~~~  282 (488)
                      +.++++...+.|+.+|+.++.......    .......++++++++.|+++...++    .+..++.. +...  ..+..
T Consensus       150 g~Lyv~d~~~~I~~id~~~~~v~~~~~----~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~~~~~~~l~~  224 (430)
T 3tc9_A          150 NHLYLVGEQHPTRLIDFEKEYVSTVYS----GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-SGFKVITELTK  224 (430)
T ss_dssp             EEEEEEEBTEEEEEEETTTTEEEEEEC----CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-GTSCSEEEEEE
T ss_pred             CeEEEEeCCCcEEEEECCCCEEEEEec----CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-Cceeeeeeecc
Confidence            566666655899999998877555443    3456889999999997777733222    23334432 2211  12211


Q ss_pred             ccccEEEEEe---cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-c-CeEEEEECCCC-
Q psy14511        283 HMHQVIAMCW---NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-N-NTVKIWDFRQL-  356 (488)
Q Consensus       283 ~~~~v~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d-~~i~iwd~~~~-  356 (488)
                       ......+++   ++.++++-..++.|+.++....................++|+|+|++|..+. . +.|..++.... 
T Consensus       225 -~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~  303 (430)
T 3tc9_A          225 -GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKT  303 (430)
T ss_dssp             -CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTT
T ss_pred             -CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCccc
Confidence             112234444   4566666667789999998764321111111223467899999999766665 4 89999886532 


Q ss_pred             -CC--Ccc-------------------cceee-e-ee--------cCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeec
Q psy14511        357 -DA--KRP-------------------LGLIV-P-KL--------KREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIH  404 (488)
Q Consensus       357 -~~--~~~-------------------~~~~~-~-~~--------~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~  404 (488)
                       ..  ...                   +.... . +.        .++|...++  -...+.|+.++ .+++... +.+.
T Consensus       304 ~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyva--D~~n~~I~~i~-~~G~v~~-~~g~  379 (430)
T 3tc9_A          304 KRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFC--DRENHCIRILT-PQGRVTT-FAGR  379 (430)
T ss_dssp             TEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEE--EGGGTEEEEEC-TTSEEEE-EEEC
T ss_pred             ccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEE--ECCCcEEEEEC-CCCcEEE-EEeC
Confidence             10  000                   00000 1 11        122444444  44567788888 4554333 3221


Q ss_pred             ---------c---------ccEEEEEEcCC-CCEEEEEeCCCcEEEEecC
Q psy14511        405 ---------Q---------ERILSAVLSPD-QTCVAAASADETISIWNCF  435 (488)
Q Consensus       405 ---------~---------~~v~~~~~s~~-~~~l~t~~~dg~v~iw~~~  435 (488)
                               .         .....++++|+ +.++++-.....|+.++++
T Consensus       380 g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e  429 (430)
T 3tc9_A          380 GSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE  429 (430)
T ss_dssp             CTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred             CCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence                     1         14789999995 5555555566778877754

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=98.36  E-value=0.0022  Score=61.70  Aligned_cols=419  Identities=8%  Similarity=0.000  Sum_probs=209.9

Q ss_pred             cc-CCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec---CCeEEEEeccccCcCCCccccc
Q psy14511          2 CW-NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS---NNTVKIWDFRQLDAKRPQVNNQ   77 (488)
Q Consensus         2 ~~-dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~---d~~i~vwd~~~~~~~~~~~~~~   77 (488)
                      .| ++++..+-...+.|.+.++.... ....+...-.....|++.|...+|....   .+.|...+++... ...+.   
T Consensus        88 D~~~~~LY~tD~~~~~I~v~~~dG~~-~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~-~~~l~---  162 (628)
T 4a0p_A           88 DWLGKNLYWADTGTNRIEVSKLDGQH-RQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE-RTTLV---  162 (628)
T ss_dssp             ETTTTEEEEEETTTTEEEEEETTSTT-CEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEEEE---
T ss_pred             EeCCCEEEEEECCCCEEEEEecCCCc-EEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc-eEEEE---
Confidence            35 35555565667889999886543 2222334445578999999555554443   5788888876432 22221   


Q ss_pred             ccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCcccccccccccc-------ccceeEEEEEee
Q psy14511         78 CHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQ-------KKRRHLSFLLHG  150 (488)
Q Consensus        78 ~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~  150 (488)
                      ..-.....|++.++++.|+.+-..  .+.|...++..... ..+.........++  .+..       ....+..+... 
T Consensus       163 ~~~~~P~GlalD~~~~~LY~aD~~--~~~I~~~d~dG~~~-~v~~~~l~~P~gla--v~~~~ly~tD~~~~~I~~~dk~-  236 (628)
T 4a0p_A          163 PNVGRANGLTIDYAKRRLYWTDLD--TNLIESSNMLGLNR-EVIADDLPHPFGLT--QYQDYIYWTDWSRRSIERANKT-  236 (628)
T ss_dssp             CSCSSEEEEEEETTTTEEEEEETT--TTEEEEEETTSCSC-EEEEECCSCEEEEE--EETTEEEEEETTTTEEEEEETT-
T ss_pred             CCCCCcceEEEccccCEEEEEECC--CCEEEEEcCCCCce-EEeeccCCCceEEE--EECCEEEEecCCCCEEEEEECC-
Confidence            133567899999988888888764  78899999865433 22222111111111  1110       00001111000 


Q ss_pred             eeccccceeccccc-cccceeeeccccc--cccccc-CCC-ceeecCCCccccceeee-----------eeeCCCcEEEE
Q psy14511        151 FEIDRKKVLNQSKR-TVSPTQFLRTLGK--LPRKVK-AKP-ERILEAPSIINDFYTSG-----------LDWGYHDTLAV  214 (488)
Q Consensus       151 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~-~~~-~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~  214 (488)
                       .-....++..... ......+....+.  .+.... ... ...+..+.  ..+.+.+           -+.....++..
T Consensus       237 -tg~~~~~l~~~~~~p~~i~v~~~~~q~~~n~C~~~ng~C~~~C~~~~~--~~~~C~C~~g~~l~~d~~~C~~~~~~Ll~  313 (628)
T 4a0p_A          237 -SGQNRTIIQGHLDYVMDILVFHSSRQSGWNECASSNGHCSHLCLAVPV--GGFVCGCPAHYSLNADNRTCSAPTTFLLF  313 (628)
T ss_dssp             -TCCSCEEEECSCCSCCEEEEECGGGSCCCCTTTTTGGGCSSEEEEETT--TEEEEECSTTCEECTTSSCEECCSSEEEE
T ss_pred             -CCCceEEEecCCCCcceeeeeeecccccceEeccCCCCcchhhhcCCC--CCeeEEcCCCcEecccCCcCccccceeee
Confidence             0000011110000 0000000000000  000000 000 00000000  0000000           01123445666


Q ss_pred             ECCCeEEEEECCCCce-EEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecc------ccccE
Q psy14511        215 ALDTSVYTWNTKTNKT-QLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRT------HMHQV  287 (488)
Q Consensus       215 ~~d~~v~iw~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~------~~~~v  287 (488)
                      +....|+-..+..... ...+...  .-..+..++|.+..+.|+.+-...+.|+.+++........+..      .....
T Consensus       314 s~~~~i~~i~l~~~~~~~~~l~~~--~~~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p  391 (628)
T 4a0p_A          314 SQKSAINRMVIDEQQSPDIILPIH--SLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQP  391 (628)
T ss_dssp             EETTEEEEECCCTTCCCCEECCCT--TCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCE
T ss_pred             eccceEEEEecccccCceEEEEeh--hcCCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCc
Confidence            6667777666654322 1122222  3356889999998888888745678888888765332222221      22345


Q ss_pred             EEEEec--CC-EEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccC-CcEEEEEec-C--eEEEEECCCCCCCc
Q psy14511        288 IAMCWN--GN-LLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPN-GRYLASGSN-N--TVKIWDFRQLDAKR  360 (488)
Q Consensus       288 ~~~~~~--~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~d-~--~i~iwd~~~~~~~~  360 (488)
                      ..+++|  ++ +.++-+..+.|.+.++... .....+...-....+++++|. |.++.+-.. .  .|...++.......
T Consensus       392 ~glAvD~~~~nLY~td~~~~~I~v~~~~G~-~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~~~  470 (628)
T 4a0p_A          392 YDLSIDIYSRYIYWTCEATNVINVTRLDGR-SVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTEREV  470 (628)
T ss_dssp             EEEEEETTTTEEEEEETTTTEEEEEETTSC-EEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSCEE
T ss_pred             ceEEeeccCCeEEEEcCCCCEEEEEECCCC-eEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCcEE
Confidence            666663  44 5556667889999998642 222223334456889999994 544444332 3  57777765332211


Q ss_pred             ccc----eee-eeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEe-eccccEEEEEEcCCCCEEEEEeCCCcEEEEec
Q psy14511        361 PLG----LIV-PKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELK-IHQERILSAVLSPDQTCVAAASADETISIWNC  434 (488)
Q Consensus       361 ~~~----~~~-~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~  434 (488)
                      ...    ... -++.++++.|+.+ -...+.|...++. |.....+. .......+++... +..+.+=.....|...|.
T Consensus       471 l~~~~l~~P~gla~D~~~~~LYw~-D~~~~~I~~~~~d-G~~r~~~~~~~~~~P~glav~~-~~ly~tD~~~~~i~~~~k  547 (628)
T 4a0p_A          471 LFFSGLSKPIALALDSRLGKLFWA-DSDLRRIESSDLS-GANRIVLEDSNILQPVGLTVFE-NWLYWIDKQQQMIEKIDM  547 (628)
T ss_dssp             EECSSCSCEEEEEEETTTTEEEEE-ETTTTEEEEEETT-SCSCEEEECSSCSCEEEEEEET-TEEEEEETTTTEEEEEET
T ss_pred             EEeccCCCccEEEEeCCCCEEEEE-eCCCCEEEEEeCC-CCceEEEEcCCCCCcEEEEEEC-CEEEEEECCCCeEEEEEC
Confidence            111    111 1778877777765 4556889999985 33344443 3334567777754 444455556677888887


Q ss_pred             CCCCcc
Q psy14511        435 FPRDKK  440 (488)
Q Consensus       435 ~~~~~~  440 (488)
                      .+++..
T Consensus       548 ~~G~~~  553 (628)
T 4a0p_A          548 TGREGR  553 (628)
T ss_dssp             TSSSCC
T ss_pred             cCCCCc
Confidence            766643

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=98.33  E-value=0.00036  Score=63.92  Aligned_cols=222  Identities=9%  Similarity=-0.009  Sum_probs=125.3

Q ss_pred             eeeeCC----CcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCC-----cEEEEECCc
Q psy14511        203 GLDWGY----HDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTE-----YIDLWHEQE  273 (488)
Q Consensus       203 ~~~~~~----~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~-----~i~i~d~~~  273 (488)
                      .+.+++    +.++.+...+.|+.++..++.......    .......++++++++ |+++ ...+     .+...+...
T Consensus       143 gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~----~~~~P~giavd~dG~-lyVa-d~~~~~~~~gv~~~~~~~  216 (433)
T 4hw6_A          143 RMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT----NIGQCADVNFTLNGD-MVVV-DDQSSDTNTGIYLFTRAS  216 (433)
T ss_dssp             EEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC----CCSCEEEEEECTTCC-EEEE-ECCSCTTSEEEEEECGGG
T ss_pred             eEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec----CCCCccEEEECCCCC-EEEE-cCCCCcccceEEEEECCC
Confidence            355553    566666655899999998887655433    345688999999999 6555 3321     233333221


Q ss_pred             cee-eeeeccccccEEEEEe---cCCEEEEeecCCeEEEEECcCCCccceeeec-CCccEEEEEEccCCcEEEEEe-c-C
Q psy14511        274 ERL-IQKLRTHMHQVIAMCW---NGNLLSCGTIGGNILHYDVRTHSDYPTAITR-EGDVVCGLKWSPNGRYLASGS-N-N  346 (488)
Q Consensus       274 ~~~-~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~-d-~  346 (488)
                      +.. ...+. .......+++   ++.+.++-..++.|+.+|..++......... ....-..++|+|++++|..+. . +
T Consensus       217 ~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~  295 (433)
T 4hw6_A          217 GFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKH  295 (433)
T ss_dssp             TTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTT
T ss_pred             Ceecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCC
Confidence            110 01111 1112233444   3555555556788999998754321112111 122234699999999776666 3 8


Q ss_pred             eEEEEECCC--CCCC--cc-------------------cceee-eee---------cCCCCEEEEEccCCCCeEEEEeCC
Q psy14511        347 TVKIWDFRQ--LDAK--RP-------------------LGLIV-PKL---------KREGRELVTSHGKQDCSLKMWEYP  393 (488)
Q Consensus       347 ~i~iwd~~~--~~~~--~~-------------------~~~~~-~~~---------~~~~~~l~~~~g~~~~~i~i~d~~  393 (488)
                      .|+.++...  ....  ..                   +.... .++         .++|...++  ....+.|+.++. 
T Consensus       296 ~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyva--D~~n~~I~~~~~-  372 (433)
T 4hw6_A          296 CIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFC--DRDSHTVRVLTP-  372 (433)
T ss_dssp             EEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEE--ETTTTEEEEECT-
T ss_pred             EEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEE--ECCCCEEEEECC-
Confidence            999988652  2110  00                   00001 155         555655555  566788998884 


Q ss_pred             CcceeEEEeec------------------cccEEEEEEc-CCCCEEEEEeCCCcEEEEecC
Q psy14511        394 RLHLIEELKIH------------------QERILSAVLS-PDQTCVAAASADETISIWNCF  435 (488)
Q Consensus       394 ~~~~~~~~~~~------------------~~~v~~~~~s-~~~~~l~t~~~dg~v~iw~~~  435 (488)
                      ++... ++.+.                  -.....++++ +++.++++-...+.|+..+++
T Consensus       373 ~G~v~-t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e  432 (433)
T 4hw6_A          373 EGRVT-TYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE  432 (433)
T ss_dssp             TSEEE-EEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred             CCCEE-EEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence            55433 33221                  1236789999 566666666667788887764

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=98.31  E-value=0.00033  Score=58.37  Aligned_cols=79  Identities=13%  Similarity=0.114  Sum_probs=52.3

Q ss_pred             eecccCceEEEEEEccCCcEEEEec--CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEE
Q psy14511         31 AITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVR  108 (488)
Q Consensus        31 ~~~~h~~~V~~l~~sp~g~~las~~--d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~  108 (488)
                      .+.+-.+.+..++|+|+++.|.+..  ++.|...|.. ++..+.+ .+.+ ......|++.+++.++++.-.   ++.+.
T Consensus        21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i-~l~g-~~D~EGIa~~~~g~~~vs~E~---~~~l~   94 (255)
T 3qqz_A           21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTI-PLDF-VKDLETIEYIGDNQFVISDER---DYAIY   94 (255)
T ss_dssp             ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEE-ECSS-CSSEEEEEECSTTEEEEEETT---TTEEE
T ss_pred             ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEE-ecCC-CCChHHeEEeCCCEEEEEECC---CCcEE
Confidence            3445556799999999877666654  7888888876 4433322 1222 246778888888865454333   77888


Q ss_pred             EEecCCC
Q psy14511        109 LWNSMNG  115 (488)
Q Consensus       109 vwd~~~~  115 (488)
                      ++++...
T Consensus        95 ~~~v~~~  101 (255)
T 3qqz_A           95 VISLTPN  101 (255)
T ss_dssp             EEEECTT
T ss_pred             EEEcCCC
Confidence            8887544

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=98.27  E-value=0.0013  Score=54.85  Aligned_cols=194  Identities=11%  Similarity=0.135  Sum_probs=121.7

Q ss_pred             ecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecc-ccccEEEEEe--cCCEEEEeecCCeEEEEEC
Q psy14511        235 EYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRT-HMHQVIAMCW--NGNLLSCGTIGGNILHYDV  311 (488)
Q Consensus       235 ~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~-~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~  311 (488)
                      .+++ ....+..++++|+++.|++....++.|...|.. ++.++.+.- .....-.+++  ++.++++.-.++.+.++++
T Consensus        21 ~l~g-~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v   98 (255)
T 3qqz_A           21 EIAG-ITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISL   98 (255)
T ss_dssp             ECTT-CCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred             ECCC-cccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence            4555 556899999999887777654778899999988 777776642 2245667777  4555566556778999987


Q ss_pred             cCCCc--cceee------ecCCccEEEEEEccCCcEEEEEec-CeEEEEECCCC---CCCccc-----------cee-ee
Q psy14511        312 RTHSD--YPTAI------TREGDVVCGLKWSPNGRYLASGSN-NTVKIWDFRQL---DAKRPL-----------GLI-VP  367 (488)
Q Consensus       312 ~~~~~--~~~~~------~~~~~~i~~~~~s~~~~~l~~~~d-~~i~iwd~~~~---~~~~~~-----------~~~-~~  367 (488)
                      .....  .....      ...+.....++|+|.++.|.++.+ ....+|.+...   .....+           ... .-
T Consensus        99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l  178 (255)
T 3qqz_A           99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGA  178 (255)
T ss_dssp             CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEE
T ss_pred             CCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeE
Confidence            66442  11111      123445689999999977777774 44444444311   000100           011 11


Q ss_pred             eecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeecc---------ccEEEEEEcCCCCEEEEEeCCCcEEEEe
Q psy14511        368 KLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQ---------ERILSAVLSPDQTCVAAASADETISIWN  433 (488)
Q Consensus       368 ~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~---------~~v~~~~~s~~~~~l~t~~~dg~v~iw~  433 (488)
                      ++.|....+++. ......+..+|.. ++.+..+.-..         ..-..|+|.++|+..++ ++-..++.+.
T Consensus       179 ~~dp~tg~lliL-S~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~  250 (255)
T 3qqz_A          179 EFNQQKNTLLVL-SHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFT  250 (255)
T ss_dssp             EEETTTTEEEEE-ETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEE
T ss_pred             EEcCCCCeEEEE-ECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEE
Confidence            777766555554 5678889999965 55555443221         25689999999985555 6666555554

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=98.24  E-value=0.0037  Score=61.60  Aligned_cols=224  Identities=9%  Similarity=-0.032  Sum_probs=127.5

Q ss_pred             CCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec--CCeEEEEeccccCcC-CCcccccccccceeEEEEec
Q psy14511         14 GGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAK-RPQVNNQCHLSAVKAIAWCP   90 (488)
Q Consensus        14 dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~--d~~i~vwd~~~~~~~-~~~~~~~~h~~~v~~l~~~~   90 (488)
                      ...|+..++.... ... +......+..|+|.+....|..+.  .+.|+.+++...... .....+.........|++.+
T Consensus       403 ~~~Ir~i~l~~~~-~~~-l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~  480 (791)
T 3m0c_C          403 RHEVRKMTLDRSE-YTS-LIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW  480 (791)
T ss_dssp             BSSEEEECTTSCC-CEE-EECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEET
T ss_pred             ccceeEeeccCCc-cee-eecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeee
Confidence            4567777776554 222 333345678999999666555554  788999998742110 11111222334567899998


Q ss_pred             CCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecccccccccee
Q psy14511         91 WEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQ  170 (488)
Q Consensus        91 ~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (488)
                      .++.|+.+...  .+.|.+.++........+........                                         
T Consensus       481 ~~~~LY~tD~~--~~~I~v~~ldG~~~~~l~~~~l~~P~-----------------------------------------  517 (791)
T 3m0c_C          481 IHSNIYWTDSV--LGTVSVADTKGVKRKTLFRENGSKPR-----------------------------------------  517 (791)
T ss_dssp             TTTEEEEEETT--TTEEEEEETTSSSEEEEEECTTCCEE-----------------------------------------
T ss_pred             cCCcEEEEecC--CCeEEEEeCCCCeEEEEEeCCCCCcc-----------------------------------------
Confidence            88888887764  78999999864332211111100000                                         


Q ss_pred             eecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEE-C-CCeEEEEECCCCceEEEEecCCCCCCceEEEE
Q psy14511        171 FLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVA-L-DTSVYTWNTKTNKTQLLVEYPTYDNAYISCVA  248 (488)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~  248 (488)
                                                    -..+++..+.++.+. . .+.|...++.......+...   .-.....|+
T Consensus       518 ------------------------------gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~---~l~~P~GLa  564 (791)
T 3m0c_C          518 ------------------------------AIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE---NIQWPNGIT  564 (791)
T ss_dssp             ------------------------------EEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECS---SCSCEEEEE
T ss_pred             ------------------------------eEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeC---CCCCceEEE
Confidence                                          001222224444443 2 26788888765544433332   335688999


Q ss_pred             EcCCCCeEEEEeCCCCcEEEEECCcceeeeeecc--ccccEEEEEecCC-EEEEeecCCeEEEEECcCCC
Q psy14511        249 WKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRT--HMHQVIAMCWNGN-LLSCGTIGGNILHYDVRTHS  315 (488)
Q Consensus       249 ~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~--~~~~v~~~~~~~~-~l~~~~~dg~i~i~d~~~~~  315 (488)
                      +++.+..|+.+-...+.|..+++........+..  .-....+|++.+. ++++-...+.|...|..+++
T Consensus       565 vD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~tG~  634 (791)
T 3m0c_C          565 LDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGS  634 (791)
T ss_dssp             EETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred             EecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEECCCCEEEEEeCCCCc
Confidence            9988888888856677899999876433333322  2234456666444 44444556778888876654

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=98.24  E-value=0.0039  Score=61.43  Aligned_cols=225  Identities=9%  Similarity=-0.026  Sum_probs=136.1

Q ss_pred             CcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcc----eeeeeecccc
Q psy14511        209 HDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEE----RLIQKLRTHM  284 (488)
Q Consensus       209 ~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~----~~~~~~~~~~  284 (488)
                      ..++..+....|+..++.......+..    ....+..++|++....|+.+....+.|+.+++...    .....+....
T Consensus       395 ~p~Ll~an~~~Ir~i~l~~~~~~~l~~----~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l  470 (791)
T 3m0c_C          395 IAYLFFTNRHEVRKMTLDRSEYTSLIP----NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI  470 (791)
T ss_dssp             CCEEEEECBSSEEEECTTSCCCEEEEC----SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSC
T ss_pred             ccccccccccceeEeeccCCcceeeec----CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCC
Confidence            345666677788888888776555443    34567899999977777777466788988888752    2222232222


Q ss_pred             ccEEEEEe--cC-CEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe--c-CeEEEEECCCCCC
Q psy14511        285 HQVIAMCW--NG-NLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--N-NTVKIWDFRQLDA  358 (488)
Q Consensus       285 ~~v~~~~~--~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--d-~~i~iwd~~~~~~  358 (488)
                      .....|++  .+ ++.++-...+.|.+.++.... ....+...-.....|+++|.+.+|+.+.  . +.|...++.....
T Consensus       471 ~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~-~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~  549 (791)
T 3m0c_C          471 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK-RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI  549 (791)
T ss_dssp             SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS-EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE
T ss_pred             CCcceeeeeecCCcEEEEecCCCeEEEEeCCCCe-EEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCce
Confidence            33334444  34 555566677899999987532 2223333444578999999866666654  3 6788888875432


Q ss_pred             Cccccee-----eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeec--cccEEEEEEcCCCCEEEEEeCCCcEEE
Q psy14511        359 KRPLGLI-----VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIH--QERILSAVLSPDQTCVAAASADETISI  431 (488)
Q Consensus       359 ~~~~~~~-----~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~t~~~dg~v~i  431 (488)
                      ...+...     -.++.+.+..|+.+ -...+.|..+++........+...  -....+|++.. ++++++-...+.|..
T Consensus       550 ~~lv~~~l~~P~GLavD~~~~~LYwa-D~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I~~  627 (791)
T 3m0c_C          550 YSLVTENIQWPNGITLDLLSGRLYWV-DSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFS  627 (791)
T ss_dssp             EEEECSSCSCEEEEEEETTTTEEEEE-ETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEE
T ss_pred             EEEEeCCCCCceEEEEecCCCeEEEE-eCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeC-CEEEEEECCCCEEEE
Confidence            2111111     11777777777765 456678999998654333333321  22345676633 344444446678888


Q ss_pred             EecCCCCcc
Q psy14511        432 WNCFPRDKK  440 (488)
Q Consensus       432 w~~~~~~~~  440 (488)
                      .+..+++..
T Consensus       628 ~dk~tG~~~  636 (791)
T 3m0c_C          628 ANRLTGSDV  636 (791)
T ss_dssp             EETTTCCCC
T ss_pred             EeCCCCcce
Confidence            887777554

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=98.24  E-value=0.0018  Score=59.26  Aligned_cols=62  Identities=13%  Similarity=0.132  Sum_probs=44.8

Q ss_pred             CcEEEEE-CCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECC
Q psy14511        209 HDTLAVA-LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQ  272 (488)
Q Consensus       209 ~~~~~~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~  272 (488)
                      +.++.+. ..+.|+.++..++.........  .......++|+|++++|+++....+.|..++..
T Consensus       238 g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~--~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d  300 (430)
T 3tc9_A          238 GELYFNSWNAGQVFRYDFTTQETTPLFTIQ--DSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD  300 (430)
T ss_dssp             CCEEEEETTTTEEEEEETTTTEEEEEEECS--SSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred             CEEEEEECCCCEEEEEECCCCcEEEEEEcC--CCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence            4566555 6789999999877654444432  224578999999999777775778899998765

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=98.03  E-value=0.006  Score=56.12  Aligned_cols=62  Identities=8%  Similarity=0.003  Sum_probs=42.4

Q ss_pred             CcEEEEE-CCCeEEEEECC-------CCce------------EEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEE
Q psy14511        209 HDTLAVA-LDTSVYTWNTK-------TNKT------------QLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDL  268 (488)
Q Consensus       209 ~~~~~~~-~d~~v~iw~~~-------~~~~------------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i  268 (488)
                      +.++++. .++.|+.+|+.       ++..            ......+  .......++|+|+++.|+++-+..+.|+.
T Consensus       259 g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~--~~~~p~~ia~~p~G~~lYvaD~~~h~I~k  336 (496)
T 3kya_A          259 GELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIA--DPSWEFQIFIHPTGKYAYFGVINNHYFMR  336 (496)
T ss_dssp             CCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECS--SSSCCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred             CeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecC--CCCCceEEEEcCCCCEEEEEeCCCCEEEE
Confidence            5566555 77889999987       4543            1233332  34456899999999977777467888988


Q ss_pred             EECC
Q psy14511        269 WHEQ  272 (488)
Q Consensus       269 ~d~~  272 (488)
                      ++..
T Consensus       337 id~d  340 (496)
T 3kya_A          337 SDYD  340 (496)
T ss_dssp             EEEE
T ss_pred             EecC
Confidence            6543

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=98.03  E-value=0.006  Score=53.55  Aligned_cols=139  Identities=7%  Similarity=-0.014  Sum_probs=78.3

Q ss_pred             CcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecc----cc
Q psy14511        209 HDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRT----HM  284 (488)
Q Consensus       209 ~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~----~~  284 (488)
                      +.+++++.++.++.-+-..+..-......  ....+..+++.++++.++++  .+|.+++.+...++.-..+..    ..
T Consensus       174 ~~~~~~g~~G~~~~S~d~gG~tW~~~~~~--~~~~~~~~~~~~~g~~~~~~--~~G~~~~s~~D~G~tW~~~~~~~~~~~  249 (327)
T 2xbg_A          174 GEYVAVSSRGSFYSTWEPGQTAWEPHNRT--TSRRLHNMGFTPDGRLWMIV--NGGKIAFSDPDNSENWGELLSPLRRNS  249 (327)
T ss_dssp             SCEEEEETTSSEEEEECTTCSSCEEEECC--SSSCEEEEEECTTSCEEEEE--TTTEEEEEETTEEEEECCCBCTTSSCC
T ss_pred             CcEEEEECCCcEEEEeCCCCCceeECCCC--CCCccceeEECCCCCEEEEe--CCceEEEecCCCCCeeEeccCCcccCC
Confidence            45677776666655432212211122221  45678899999998766555  678777765443444333321    22


Q ss_pred             ccEEEEEec-CCEEEEeecCCeEEEEECcCCCccceeee---cCCccEEEEEEccCCcEEEEEecCeEEEEEC
Q psy14511        285 HQVIAMCWN-GNLLSCGTIGGNILHYDVRTHSDYPTAIT---REGDVVCGLKWSPNGRYLASGSNNTVKIWDF  353 (488)
Q Consensus       285 ~~v~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~  353 (488)
                      ..+.++.+. +..+++++.+|.+ ++....+. .-..+.   .....+.++.|.++++.++.+.+|.|.-++-
T Consensus       250 ~~~~~v~~~~~~~~~~~g~~g~i-~~S~DgG~-tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i~~~~~  320 (327)
T 2xbg_A          250 VGFLDLAYRTPNEVWLAGGAGAL-LCSQDGGQ-TWQQDVDVKKVPSNFYKILFFSPDQGFILGQKGILLRYVT  320 (327)
T ss_dssp             SCEEEEEESSSSCEEEEESTTCE-EEESSTTS-SCEECGGGTTSSSCCCEEEEEETTEEEEECSTTEEEEECC
T ss_pred             cceEEEEecCCCEEEEEeCCCeE-EEeCCCCc-ccEEcCccCCCCCCeEEEEEECCCceEEEcCCceEEEEcC
Confidence            357888883 3344444557766 34444333 222222   1234578888987777777777788776654

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=98.02  E-value=2.1e-05  Score=76.80  Aligned_cols=224  Identities=10%  Similarity=0.004  Sum_probs=128.9

Q ss_pred             EEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCc----ceeeeeecccccc
Q psy14511        211 TLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE----ERLIQKLRTHMHQ  286 (488)
Q Consensus       211 ~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~----~~~~~~~~~~~~~  286 (488)
                      ++..+..+.|+..++.+.+...++.    ....+..++|++.+..|+.+-...+.|+.+++..    ......+......
T Consensus       379 ~ll~~~~~~I~~id~~~~~~~~~~~----~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~  454 (699)
T 1n7d_A          379 YLFFTNRHEVRKMTLDRSEYTSLIP----NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQA  454 (699)
T ss_dssp             CBCCCCTTC-CEECTTSCCEECCSC----CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--
T ss_pred             eEEecCccceEEEeCCCCcceeeec----cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCC
Confidence            3444455678888887766543332    2345678899998888887745668899999875    2222222111122


Q ss_pred             EEEEEe---cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe--c-CeEEEEECCCCCCCc
Q psy14511        287 VIAMCW---NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--N-NTVKIWDFRQLDAKR  360 (488)
Q Consensus       287 v~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--d-~~i~iwd~~~~~~~~  360 (488)
                      ...+++   .++++++-...+.|.++++.... ....+.........++++|.+.+|+.+.  . +.|..+++.......
T Consensus       455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~-~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~  533 (699)
T 1n7d_A          455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK-RKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS  533 (699)
T ss_dssp             CCCEECCCSSSBCEECCTTTSCEEEEBSSSCC-EEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCE
T ss_pred             cceEEEEeeCCcEEEEeccCCeEEEEecCCCc-eEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeE
Confidence            234444   34555555667889999987532 2222222223456789999766665544  3 678887775432211


Q ss_pred             ccce-e----eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEee--ccccEEEEEEcCCCCEEEEEeCCCcEEEEe
Q psy14511        361 PLGL-I----VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKI--HQERILSAVLSPDQTCVAAASADETISIWN  433 (488)
Q Consensus       361 ~~~~-~----~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~  433 (488)
                      .+.. +    -.+++|++..|+.+ -...+.|..+++........+..  .-.....|++..+ .++++....+.|..++
T Consensus       534 l~~~~l~~PnGlavd~~~~~LY~a-D~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d  611 (699)
T 1n7d_A          534 LVTENIQWPNGITLDLLSGRLYWV-DSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSAN  611 (699)
T ss_dssp             ESCSSCSSCCCEEECTTTCCEEEE-ETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEE
T ss_pred             EEeCCCCCccEEEEeccCCEEEEE-ecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEE
Confidence            1111 1    12888887766665 45678899999864332222221  1123445666443 4455555678999999


Q ss_pred             cCCCCccc
Q psy14511        434 CFPRDKKR  441 (488)
Q Consensus       434 ~~~~~~~~  441 (488)
                      ..+++...
T Consensus       612 ~~~G~~~~  619 (699)
T 1n7d_A          612 RLTGSDVN  619 (699)
T ss_dssp             TTTEEEEE
T ss_pred             ccCCCceE
Confidence            87776553

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=97.97  E-value=0.0087  Score=55.05  Aligned_cols=227  Identities=11%  Similarity=0.043  Sum_probs=130.6

Q ss_pred             CcEEEEE-CCCeEEEEECCCCceEEEEecCCCCCCceEEEEE-------cCCCCeEEEEeCCCC------cEEEEECCc-
Q psy14511        209 HDTLAVA-LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAW-------KPRTTDLAVTNTCTE------YIDLWHEQE-  273 (488)
Q Consensus       209 ~~~~~~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~-------~~~~~~l~~~~~~~~------~i~i~d~~~-  273 (488)
                      ++++++. ..+.|++.|+.++....+.............++|       +++++.|+++...++      .|.+++... 
T Consensus       152 ~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~  231 (496)
T 3kya_A          152 DHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNAD  231 (496)
T ss_dssp             EEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTT
T ss_pred             CEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCC
Confidence            4566665 4478999999998877666542212345889999       999997777733332      255665333 


Q ss_pred             ceee-----eeeccccccEEEEEe---cCCEEEEeecCCeEEEEECc-------CCCc-----c-----c-eee-ecCCc
Q psy14511        274 ERLI-----QKLRTHMHQVIAMCW---NGNLLSCGTIGGNILHYDVR-------THSD-----Y-----P-TAI-TREGD  326 (488)
Q Consensus       274 ~~~~-----~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~i~d~~-------~~~~-----~-----~-~~~-~~~~~  326 (488)
                      +...     ..+.... ....++.   ++.++++-..++.|+.+|+.       ++..     +     . ... .....
T Consensus       232 G~~~~~~~~~~v~~~~-~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~  310 (496)
T 3kya_A          232 GTFDDRSDIQLIAAYK-QCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPS  310 (496)
T ss_dssp             SCCSTTSCEEEEEEES-CCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSS
T ss_pred             CceeecccceeeccCC-CceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCC
Confidence            1211     1221111 1233444   35566667778889999987       4332     0     1 111 12233


Q ss_pred             cEEEEEEccCCcEEEEEe-c-CeEEEEECCC--CCCC--c-------------------ccceee-e-eec-------CC
Q psy14511        327 VVCGLKWSPNGRYLASGS-N-NTVKIWDFRQ--LDAK--R-------------------PLGLIV-P-KLK-------RE  372 (488)
Q Consensus       327 ~i~~~~~s~~~~~l~~~~-d-~~i~iwd~~~--~~~~--~-------------------~~~~~~-~-~~~-------~~  372 (488)
                      ....++|+|+|++|..+. . ..|+.++...  ....  .                   .+.... . ...       ++
T Consensus       311 ~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~  390 (496)
T 3kya_A          311 WEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEE  390 (496)
T ss_dssp             CCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCC
T ss_pred             CceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCC
Confidence            457899999999766665 3 8898866532  1100  0                   011111 1 222       33


Q ss_pred             CCEEEEEccCCCCeEEEEeCCCcceeEEEeec------------------------cccEEEEEEcCC-CCEEEEEeCCC
Q psy14511        373 GRELVTSHGKQDCSLKMWEYPRLHLIEELKIH------------------------QERILSAVLSPD-QTCVAAASADE  427 (488)
Q Consensus       373 ~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~------------------------~~~v~~~~~s~~-~~~l~t~~~dg  427 (488)
                      +.+.++  -..++.|+.++ .++. +.++-+.                        -.....|++.++ +.++++=....
T Consensus       391 g~lyVa--D~~N~rIr~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~  466 (496)
T 3kya_A          391 YDFYFV--DRLNFCVRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGH  466 (496)
T ss_dssp             EEEEEE--EGGGTEEEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTT
T ss_pred             CeEEEE--ECCCCEEEEEe-CCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCC
Confidence            444444  45678899988 4564 4444332                        023678999997 66666666678


Q ss_pred             cEEEEecCCCCcc
Q psy14511        428 TISIWNCFPRDKK  440 (488)
Q Consensus       428 ~v~iw~~~~~~~~  440 (488)
                      .|+.++++.....
T Consensus       467 rIrki~~~~~~~~  479 (496)
T 3kya_A          467 TIRTISMEQEENV  479 (496)
T ss_dssp             EEEEEEECCCC--
T ss_pred             EEEEEECCCCccc
Confidence            8999988765443

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=97.90  E-value=0.00017  Score=70.45  Aligned_cols=221  Identities=9%  Similarity=-0.050  Sum_probs=116.5

Q ss_pred             CCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec--CCeEEEEecccc---CcCCCcccccccccceeEEEE
Q psy14511         14 GGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQL---DAKRPQVNNQCHLSAVKAIAW   88 (488)
Q Consensus        14 dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~--d~~i~vwd~~~~---~~~~~~~~~~~h~~~v~~l~~   88 (488)
                      .+.|++.++.+.... .++.. ...+..|+|++.+..|..+.  .+.|+.+++.+.   .....+  +.........|++
T Consensus       385 ~~~I~~id~~~~~~~-~~~~~-~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~--i~~~~~~P~glav  460 (699)
T 1n7d_A          385 RHEVRKMTLDRSEYT-SLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTV--ISRDIQAPDGLAV  460 (699)
T ss_dssp             TTC-CEECTTSCCEE-CCSCC-CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCB--CCSCC--CCCEEC
T ss_pred             ccceEEEeCCCCcce-eeecc-CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEE--EeCCCCCcceEEE
Confidence            457788887765422 22222 23466899999777777665  789999998741   111111  1111223567888


Q ss_pred             ecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccc
Q psy14511         89 CPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSP  168 (488)
Q Consensus        89 ~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (488)
                      .+.+..|+.+...  .+.|.+.++........+.........++                                    
T Consensus       461 D~~~g~LY~tD~~--~~~I~v~d~dg~~~~~l~~~~~~~P~gia------------------------------------  502 (699)
T 1n7d_A          461 DWIHSNIYWTDSV--LGTVSVADTKGVKRKTLFREQGSKPRAIV------------------------------------  502 (699)
T ss_dssp             CCSSSBCEECCTT--TSCEEEEBSSSCCEEEECCCSSCCCCCEE------------------------------------
T ss_pred             EeeCCcEEEEecc--CCeEEEEecCCCceEEEEeCCCCCcceEE------------------------------------
Confidence            7666666666543  78899998764432211111100000000                                    


Q ss_pred             eeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEE-C-CCeEEEEECCCCceEEEEecCCCCCCceEE
Q psy14511        169 TQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVA-L-DTSVYTWNTKTNKTQLLVEYPTYDNAYISC  246 (488)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~  246 (488)
                                                         +++..+.++.+. . .+.|..+++.......+...   .-.....
T Consensus       503 -----------------------------------vDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~---~l~~PnG  544 (699)
T 1n7d_A          503 -----------------------------------VDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE---NIQWPNG  544 (699)
T ss_dssp             -----------------------------------CCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCS---SCSSCCC
T ss_pred             -----------------------------------EccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeC---CCCCccE
Confidence                                               111112233222 1 25666666543322222111   2234668


Q ss_pred             EEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeec--cccccEEEEEecC-CEEEEeecCCeEEEEECcCC
Q psy14511        247 VAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLR--THMHQVIAMCWNG-NLLSCGTIGGNILHYDVRTH  314 (488)
Q Consensus       247 ~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~~-~~l~~~~~dg~i~i~d~~~~  314 (488)
                      |+++|++..|+.+-...+.|..+++........+.  ........|++++ .++++....+.|..++..++
T Consensus       545 lavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G  615 (699)
T 1n7d_A          545 ITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTG  615 (699)
T ss_dssp             EEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTE
T ss_pred             EEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCC
Confidence            99999888887775677889999986532222221  1122334555544 44555556678888887654

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=97.87  E-value=0.015  Score=53.14  Aligned_cols=62  Identities=8%  Similarity=0.019  Sum_probs=42.8

Q ss_pred             CcEEEEE-CCCeEEEEECCCCce-EEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECC
Q psy14511        209 HDTLAVA-LDTSVYTWNTKTNKT-QLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQ  272 (488)
Q Consensus       209 ~~~~~~~-~d~~v~iw~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~  272 (488)
                      +.++.+. .++.|+.++..++.. .......  .......++++|+++.|+++....+.|+.++..
T Consensus       240 G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~--~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d  303 (433)
T 4hw6_A          240 GKIYYTRYHHAMISSYDPATGTLTEEEVMMD--TKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN  303 (433)
T ss_dssp             CCEEECBTTCSEEEEECTTTCCEEEEEEECS--CCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred             CeEEEEECCCCEEEEEECCCCeEEEEEeccC--CCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence            4566555 667899999987765 3333322  223345799999999777775677899998865

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=97.87  E-value=0.0037  Score=54.17  Aligned_cols=183  Identities=13%  Similarity=0.195  Sum_probs=107.7

Q ss_pred             CCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe------cCCE--E-EEee-c--CCeEEEEECcCCCccce
Q psy14511        252 RTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW------NGNL--L-SCGT-I--GGNILHYDVRTHSDYPT  319 (488)
Q Consensus       252 ~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~------~~~~--l-~~~~-~--dg~i~i~d~~~~~~~~~  319 (488)
                      ....++.+ ...+.+.+||+ .++.++.+..  +.+..+..      .++.  + ++.. .  +++|.+|++......+.
T Consensus        39 ~~s~ii~t-~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~  114 (355)
T 3amr_A           39 QNSKLITT-NKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQ  114 (355)
T ss_dssp             GGCEEEEE-ETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEE
T ss_pred             CccEEEEE-cCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCcee
Confidence            33455555 67889999999 7788888764  34444443      3332  3 3333 3  57899997742222233


Q ss_pred             eeec------CC-ccEEEEEE--ccC-Cc-EEEEEe-cCeEEEEECCCCCC----Cccccee-------eeeecCCCCEE
Q psy14511        320 AITR------EG-DVVCGLKW--SPN-GR-YLASGS-NNTVKIWDFRQLDA----KRPLGLI-------VPKLKREGREL  376 (488)
Q Consensus       320 ~~~~------~~-~~i~~~~~--s~~-~~-~l~~~~-d~~i~iwd~~~~~~----~~~~~~~-------~~~~~~~~~~l  376 (488)
                      .+..      .. ..+..+++  +|. ++ ++.+.. +|.+..|++.....    .+.++.+       -+...+....|
T Consensus       115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~L  194 (355)
T 3amr_A          115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRL  194 (355)
T ss_dssp             ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEE
T ss_pred             eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeE
Confidence            3311      11 45667777  774 54 344444 49999999843211    1112222       12666777788


Q ss_pred             EEEccCCCCeEEEEeCC-----CcceeEEEe-ec-cccEEEEEE--cCCCC-EEEEEe-CCCcEEEEecC-CCCcc
Q psy14511        377 VTSHGKQDCSLKMWEYP-----RLHLIEELK-IH-QERILSAVL--SPDQT-CVAAAS-ADETISIWNCF-PRDKK  440 (488)
Q Consensus       377 ~~~~g~~~~~i~i~d~~-----~~~~~~~~~-~~-~~~v~~~~~--s~~~~-~l~t~~-~dg~v~iw~~~-~~~~~  440 (488)
                      ++  +.++..|..++.+     +++.+..+. ++ ...+..|++  .++++ +|++++ .+..+.+||.. +.+.+
T Consensus       195 yv--~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~v  268 (355)
T 3amr_A          195 YI--AEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYV  268 (355)
T ss_dssp             EE--EETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEE
T ss_pred             EE--ecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEE
Confidence            87  5777677777754     344555442 22 236888887  55666 666666 67799999997 44433

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=97.75  E-value=0.02  Score=50.83  Aligned_cols=228  Identities=10%  Similarity=0.137  Sum_probs=152.3

Q ss_pred             eeeCCCcEEEEE----CCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeee
Q psy14511        204 LDWGYHDTLAVA----LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQK  279 (488)
Q Consensus       204 ~~~~~~~~~~~~----~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~  279 (488)
                      +...++++++.-    .+..|.+.|+..+.........      .-+.-.+|..+.++.-  ....+.+||+++...+..
T Consensus        30 ~TmESDkyicVrE~~~~~~~vvIiDl~~~~~~~rrpi~------AdsAIMnP~~~iiALr--ag~~lQiFnle~K~klks  101 (494)
T 1bpo_A           30 LTMESDKFICIREKVGEQAQVVIIDMNDPSNPIRRPIS------ADSAIMNPASKVIALK--AGKTLQIFNIEMKSKMKA  101 (494)
T ss_dssp             EEEEETTEEEEEECCTTCCEEEEEETTSTTSCEEEECC------CSEEEECSSSSCEEEE--ETTEEEEEETTTTEEEEE
T ss_pred             eeeecCceEEEEecCCCCCeEEEEECCCCCcceecccc------cceeeeCCCCcEEEEe--cCCeEEEEchHHhhhhcc
Confidence            444456666654    3347888898886654333321      2345678998888887  378999999999888877


Q ss_pred             eccccccEEEEEe-cCCEEEEeecCCeEEEEECcCCCccceeeecC----CccEEEEEEccCCcEEEEEe----c----C
Q psy14511        280 LRTHMHQVIAMCW-NGNLLSCGTIGGNILHYDVRTHSDYPTAITRE----GDVVCGLKWSPNGRYLASGS----N----N  346 (488)
Q Consensus       280 ~~~~~~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~----~~~i~~~~~s~~~~~l~~~~----d----~  346 (488)
                      ..- ...|.--.| +.+.|+..+ +..|+-|++.....+.+.+..|    ...|..-..+++.++++..+    +    |
T Consensus       102 ~~~-~e~VvfWkWis~~~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G  179 (494)
T 1bpo_A          102 HTM-TDDVTFWKWISLNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVG  179 (494)
T ss_dssp             EEC-SSCCCEEEEEETTEEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEE
T ss_pred             eec-CCCceEEEecCCCeEEEEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccc
Confidence            754 346767777 777777765 5679999998755666666655    35688888899999987543    1    7


Q ss_pred             eEEEEECCCCCCCcccceeeeee---cCCC-----CEEEEEc-cCCCCeEEEEeCCCc---ce-----eEEEe----ecc
Q psy14511        347 TVKIWDFRQLDAKRPLGLIVPKL---KREG-----RELVTSH-GKQDCSLKMWEYPRL---HL-----IEELK----IHQ  405 (488)
Q Consensus       347 ~i~iwd~~~~~~~~~~~~~~~~~---~~~~-----~~l~~~~-g~~~~~i~i~d~~~~---~~-----~~~~~----~~~  405 (488)
                      .+.+|..+... .+.+..+..+|   -.+|     ..+..+. ....+.++|.++...   ..     ...+.    ...
T Consensus       180 ~mQLYS~er~~-sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~  258 (494)
T 1bpo_A          180 AMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQN  258 (494)
T ss_dssp             EEEEEESTTCC-EEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTT
T ss_pred             eEEEeeccccc-cchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCccccc
Confidence            88999988543 24444444443   2222     2333321 122478999998432   11     11111    123


Q ss_pred             ccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcccc
Q psy14511        406 ERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRK  442 (488)
Q Consensus       406 ~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~  442 (488)
                      +-..++..|+.-..+..-+.-|.|++||++++..+..
T Consensus       259 DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~  295 (494)
T 1bpo_A          259 DFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYM  295 (494)
T ss_dssp             CCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred             CceeEEEecccCCEEEEEecCceEEEEecccceeeee
Confidence            4456788888888899999999999999999988743

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=97.70  E-value=0.013  Score=51.93  Aligned_cols=218  Identities=7%  Similarity=-0.052  Sum_probs=116.6

Q ss_pred             CceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeec---cccccEEEEEecC-----CEEEEeecC------CeEE
Q psy14511        242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLR---THMHQVIAMCWNG-----NLLSCGTIG------GNIL  307 (488)
Q Consensus       242 ~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~---~~~~~v~~~~~~~-----~~l~~~~~d------g~i~  307 (488)
                      .....++|.|+|+.+ ++ ...+.|.+++-...+.+..+.   ........++++.     ..|+.+...      +.|.
T Consensus        31 ~~P~~ia~~pdG~l~-V~-e~~g~I~~i~~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~  108 (352)
T 2ism_A           31 EVPWALAFLPDGGML-IA-ERPGRIRLFREGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV  108 (352)
T ss_dssp             SCEEEEEECTTSCEE-EE-ETTTEEEEEETTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred             CCceEEEEcCCCeEE-EE-eCCCeEEEEECCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence            356799999999854 44 467999999822222222221   2234677888843     455555432      5677


Q ss_pred             EEECcCCC-----ccceeee---cCCccEEEEEEccCCcEEEEEec--------------CeEEEEECCCCC--------
Q psy14511        308 HYDVRTHS-----DYPTAIT---REGDVVCGLKWSPNGRYLASGSN--------------NTVKIWDFRQLD--------  357 (488)
Q Consensus       308 i~d~~~~~-----~~~~~~~---~~~~~i~~~~~s~~~~~l~~~~d--------------~~i~iwd~~~~~--------  357 (488)
                      .++.....     .....+.   ........++|.|||.+.++.++              +.|.-++....-        
T Consensus       109 r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~  188 (352)
T 2ism_A          109 RLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLG  188 (352)
T ss_dssp             EEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTT
T ss_pred             EEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccC
Confidence            88776421     1111122   11112358999999977666533              456556554210        


Q ss_pred             ----CCccc----cee-eeeecC-CCCEEEEEccCCC------CeEEEEeCCC----------------cceeEEEeecc
Q psy14511        358 ----AKRPL----GLI-VPKLKR-EGRELVTSHGKQD------CSLKMWEYPR----------------LHLIEELKIHQ  405 (488)
Q Consensus       358 ----~~~~~----~~~-~~~~~~-~~~~l~~~~g~~~------~~i~i~d~~~----------------~~~~~~~~~~~  405 (488)
                          ....+    +.. -.+|+| +++..++-.+...      ..|.+.....                ..++..+. +.
T Consensus       189 ~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~-~~  267 (352)
T 2ism_A          189 RRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWP-QG  267 (352)
T ss_dssp             CTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECT-TC
T ss_pred             CCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecC-CC
Confidence                00110    000 118899 6666665433221      1244432211                01222332 22


Q ss_pred             ccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCc-------cccccccCCcceEEeecCCCceEE
Q psy14511        406 ERILSAVLSPDQTCVAAASADETISIWNCFPRDK-------KRKARQVGSGSSLEFAILKQPVSL  463 (488)
Q Consensus       406 ~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~-------~~~~~~~~~v~~~~~s~~~~~~~~  463 (488)
                      .....++| .+|.++++.-..+.|...+++....       .........+..+++.|||..+..
T Consensus       268 ~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~  331 (352)
T 2ism_A          268 FPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVT  331 (352)
T ss_dssp             CCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEE
T ss_pred             CCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEE
Confidence            34567888 5777776666677788887765432       122223467889999999865544

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=97.69  E-value=0.025  Score=50.27  Aligned_cols=166  Identities=11%  Similarity=0.070  Sum_probs=93.8

Q ss_pred             ceEEEEEcCCCCeEEEEeC------CCCcEEEEECCcceeeeeeccccccEEEEEecC-----CEEEEeecC---CeEEE
Q psy14511        243 YISCVAWKPRTTDLAVTNT------CTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNG-----NLLSCGTIG---GNILH  308 (488)
Q Consensus       243 ~i~~~~~~~~~~~l~~~~~------~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~-----~~l~~~~~d---g~i~i  308 (488)
                      .|..-..+++.++++..|-      -.|.+.+|..+. +..+.+++|......+..+|     .++..+...   +.+++
T Consensus       152 QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi  230 (494)
T 1bpo_A          152 QIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHI  230 (494)
T ss_dssp             EEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT-CCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEE
T ss_pred             eEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc-cccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEE
Confidence            4555556666666665421      246789999876 56677888888777777744     244444433   78999


Q ss_pred             EECcCCCccceeeecCCccEEEEEEccCCc----EEEEEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCC
Q psy14511        309 YDVRTHSDYPTAITREGDVVCGLKWSPNGR----YLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQD  384 (488)
Q Consensus       309 ~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~----~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~  384 (488)
                      .++.......   .........+-|.|+..    ...-.+                          +.-..++.  -..-
T Consensus       231 ~Ei~~~~~~~---~~f~kk~vdv~fppe~~~DFPvamqvs--------------------------~kygviyv--iTK~  279 (494)
T 1bpo_A          231 IEVGTPPTGN---QPFPKKAVDVFFPPEAQNDFPVAMQIS--------------------------EKHDVVFL--ITKY  279 (494)
T ss_dssp             EECSCCCTTC---CCCCCEEEECCCCTTSTTCCEEEEEEE--------------------------TTTTEEEE--EETT
T ss_pred             EEcCCCccCC---CCccceeeeeeCCcccccCceeEEEec--------------------------ccCCEEEE--EecC
Confidence            8885431000   11111122333333210    111111                          11111111  1345


Q ss_pred             CeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcc
Q psy14511        385 CSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKK  440 (488)
Q Consensus       385 ~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~  440 (488)
                      |.+++||++++.++..-+-...+|..-+......-++.....|.|.--.+++....
T Consensus       280 G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~iv  335 (494)
T 1bpo_A          280 GYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENII  335 (494)
T ss_dssp             SEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTTHH
T ss_pred             ceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEccccch
Confidence            66777777777777766666667766666666566666668888888777766554

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=97.69  E-value=0.014  Score=50.55  Aligned_cols=193  Identities=12%  Similarity=0.150  Sum_probs=107.1

Q ss_pred             eEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEcc----CCcE--EEEec--C---CeEEEEecc--ccCcCCCc
Q psy14511          7 LLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSP----NGRY--LASGS--N---NTVKIWDFR--QLDAKRPQ   73 (488)
Q Consensus         7 ~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp----~g~~--las~~--d---~~i~vwd~~--~~~~~~~~   73 (488)
                      +++.....+-+.+||+ +++.+ +.+..  +.++.+..-|    .|+.  ||.++  +   ++|.++++.  ++. ...+
T Consensus        42 ~ii~t~k~~gL~Vydl-~G~~l-~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i  116 (355)
T 3amr_A           42 KLITTNKKSGLVVYSL-DGKML-HSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSM  116 (355)
T ss_dssp             EEEEEETTTEEEEEET-TSCEE-EEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEEC
T ss_pred             EEEEEcCCCCEEEEcC-CCcEE-EEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeec
Confidence            3444456778999999 66645 33433  3466666655    2332  44443  3   789999774  221 1111


Q ss_pred             ccc--c-ccc-cceeEEEE--ecC-CC-eEEeeeCCcccceEEEEecC---CC----eeeeeeecCCCcccccccccccc
Q psy14511         74 VNN--Q-CHL-SAVKAIAW--CPW-EP-TLLATGGGICDQTVRLWNSM---NG----KEKCHVKTDSQQANDETISYREQ  138 (488)
Q Consensus        74 ~~~--~-~h~-~~v~~l~~--~~~-~~-~l~~~~~~~~d~~i~vwd~~---~~----~~~~~~~~~~~~~~~~~~~~~~~  138 (488)
                      ...  . +.. ..+..+++  +|. ++ +++++..   ++.+..|++.   .+    +.++++....+..          
T Consensus       117 ~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k---~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~E----------  183 (355)
T 3amr_A          117 TDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGK---EGEFEQYELKADKNGYISGKKVRAFKMNSQTE----------  183 (355)
T ss_dssp             SCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECS---SSEEEEEEEEECTTSCEEEEEEEEEECSSCEE----------
T ss_pred             cccccCcCCCCCCeeEEEEEecCCCCcEEEEEECC---CCeEEEEEEEeCCCCcccceEEEEecCCCCcc----------
Confidence            110  0 011 45666777  664 44 4555555   8999999883   22    3333333321100          


Q ss_pred             ccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCC
Q psy14511        139 KKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDT  218 (488)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  218 (488)
                                                                                    -+.++-..+.++++-.+.
T Consensus       184 --------------------------------------------------------------gcvvDd~~g~Lyv~eEd~  201 (355)
T 3amr_A          184 --------------------------------------------------------------GMAADDEYGRLYIAEEDE  201 (355)
T ss_dssp             --------------------------------------------------------------EEEEETTTTEEEEEETTT
T ss_pred             --------------------------------------------------------------eEEEcCCCCeEEEecccc
Confidence                                                                          011222346788888887


Q ss_pred             eEEEEECC-----CCceEEEEecCCCCCCceEEEEE--cCCCC-eEEEEeCCCCcEEEEECC-cceeeeee
Q psy14511        219 SVYTWNTK-----TNKTQLLVEYPTYDNAYISCVAW--KPRTT-DLAVTNTCTEYIDLWHEQ-EERLIQKL  280 (488)
Q Consensus       219 ~v~iw~~~-----~~~~~~~~~~~~~~~~~i~~~~~--~~~~~-~l~~~~~~~~~i~i~d~~-~~~~~~~~  280 (488)
                      .|..++.+     +++.+....... ....+..+++  .++++ +|++++-.+.+..+||.+ +.+.+..+
T Consensus       202 GIw~~da~p~~~~~~~~v~~~~~g~-l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f  271 (355)
T 3amr_A          202 AIWKFSAEPDGGSNGTVIDRADGRH-LTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADF  271 (355)
T ss_dssp             EEEEEECSTTSCSCCEEEEEBSSSS-BCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEE
T ss_pred             eEEEEeCCcCCCCCceEEEEecCCc-cccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEE
Confidence            78888855     233333332222 3346888887  45555 777774567799999986 44444444

>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}

Probab=97.61  E-value=0.028  Score=48.44  Aligned_cols=233  Identities=8%  Similarity=-0.006  Sum_probs=132.3

Q ss_pred             CCCcEEEEE--CCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCC-------------CcEEEEEC
Q psy14511        207 GYHDTLAVA--LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCT-------------EYIDLWHE  271 (488)
Q Consensus       207 ~~~~~~~~~--~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~-------------~~i~i~d~  271 (488)
                      .++.++...  .++.|+..+.+.....++...        .+--+++++.+|+.+...+             ..|+..++
T Consensus        24 ~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~~--------~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~   95 (302)
T 3s25_A           24 SDGEVFFSNTNDNGRLYAMNIDGSNIHKLSND--------TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKR   95 (302)
T ss_dssp             ETTEEEEEEGGGTTEEEEEETTSCSCEEEEEE--------EEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEET
T ss_pred             eCCEEEEEeCCCCceEEEEcCCCCCCEEccCC--------ceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeC
Confidence            344444443  256666666655544333221        1344678999998884333             45777777


Q ss_pred             CcceeeeeeccccccEEEEEecCCEEEEee--cC--CeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEec--
Q psy14511        272 QEERLIQKLRTHMHQVIAMCWNGNLLSCGT--IG--GNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN--  345 (488)
Q Consensus       272 ~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~--~d--g~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d--  345 (488)
                      ...+... +.  ......++.+++.|+-..  .+  ..|+..++..  .....+..+..    .+++|+++.|+-.++  
T Consensus        96 dg~~~~~-l~--~~~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dG--s~~~~lt~~~~----~~~~~~g~~iy~t~~g~  166 (302)
T 3s25_A           96 NGHGSTV-LD--PDPCIYASLIGNYIYYLHYDTQTATSLYRIRIDG--EEKKKIKNHYL----FTCNTSDRYFYYNNPKN  166 (302)
T ss_dssp             TSCCCEE-EE--CSCEEEEEEETTEEEEEEESSSSCEEEEEEETTS--CCCEEEESSCC----CCSEEETTEEEEECTTT
T ss_pred             CCCcceE-ee--cCCccEEEEeCCEEEEEeecCCCCceEEEEECCC--CCeEEEeCCCc----eEeeEECCEEEEEeCCC
Confidence            6654322 22  223346667888887765  33  4455555543  33455555433    457889999987774  


Q ss_pred             CeEEEEECCCCCCCccccee-eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEe
Q psy14511        346 NTVKIWDFRQLDAKRPLGLI-VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAAS  424 (488)
Q Consensus       346 ~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~  424 (488)
                      ..|...++............ ...+.|++.+|+.+.......|..-++.... ...+..  ..+  ..|+|++++|..++
T Consensus       167 ~~Iy~~~l~g~~~~~l~~~~~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~-~~~Lt~--~~~--~~~~~~g~~Iy~~~  241 (302)
T 3s25_A          167 GQLYRYDTASQSEALFYDCNCYKPVVLDDTNVYYMDVNRDNAIVHVNINNPN-PVVLTE--ANI--EHYNVYGSLIFYQR  241 (302)
T ss_dssp             CCEEEEETTTTEEEEEECSCEEEEEEEETTEEEEEEGGGTTEEEEECSSSCC-CEECSC--SCE--EEEEEETTEEEEEE
T ss_pred             ceEEEEECCCCCEEEEeCCCccceeeecCCEEEEEEcCCCcEEEEEECCCCC-eEEEeC--CCc--ceEEECCCEEEEEE
Confidence            78888888765432222111 1146689999987643334577777776544 333432  223  34888999887664


Q ss_pred             C--CCcEEEEecCCCCccccccccCCcceEEeecCCCceEEEE
Q psy14511        425 A--DETISIWNCFPRDKKRKARQVGSGSSLEFAILKQPVSLTA  465 (488)
Q Consensus       425 ~--dg~v~iw~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~  465 (488)
                      .  .+.|..-++....+..+...  .+  ...++.+..+....
T Consensus       242 ~~~~~~i~~~~~DG~~r~~l~~~--~~--~~i~i~~d~Iy~td  280 (302)
T 3s25_A          242 GGDNPALCVVKNDGTGFKELAKG--EF--CNINVTSQYVYFTD  280 (302)
T ss_dssp             CSSSCEEEEEETTSCCCEEEEES--CE--EEEEECSSEEEEEE
T ss_pred             CCCCcEEEEEECCCCccEEeeCC--cc--ceEEEeCCEEEEEE
Confidence            2  46777777776554443322  22  24555566654443

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=97.60  E-value=0.0047  Score=54.74  Aligned_cols=106  Identities=18%  Similarity=0.183  Sum_probs=71.5

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccceeeccc----CceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCC-------
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITRE----GDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRP-------   72 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h----~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~-------   72 (488)
                      ||+-|+.+- ++.||.-++...... +.+.-.    -+.|..+..||+|++||..++..|.|-.+..+.....       
T Consensus        31 n~t~i~~a~-~n~iR~~~i~~~~~Y-k~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~  108 (452)
T 3pbp_A           31 NGTRIVFIQ-DNIIRWYNVLTDSLY-HSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDA  108 (452)
T ss_dssp             TTTEEEEEE-TTEEEEEETTTCSSC-EEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHT
T ss_pred             CCCEEEEEE-CCEEEEEECCCCCcc-eEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccccc
Confidence            566666543 677887787754423 333322    2257889999999999999999999998873221110       


Q ss_pred             c--cc--ccc----cccceeEEEEecCC---CeEEeeeCCcccceEEEEecCC
Q psy14511         73 Q--VN--NQC----HLSAVKAIAWCPWE---PTLLATGGGICDQTVRLWNSMN  114 (488)
Q Consensus        73 ~--~~--~~~----h~~~v~~l~~~~~~---~~l~~~~~~~~d~~i~vwd~~~  114 (488)
                      +  ..  +..    ...+|..+.|+|-+   ..|++..+   |+.|++||+..
T Consensus       109 ~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLts---D~~Ir~yDl~~  158 (452)
T 3pbp_A          109 FQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKE---DDTITMFDILN  158 (452)
T ss_dssp             TEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEET---TSCEEEEETTC
T ss_pred             cceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEec---CCEEEEEEccc
Confidence            0  01  110    24679999999954   46777776   99999999976

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=97.57  E-value=0.013  Score=50.74  Aligned_cols=211  Identities=11%  Similarity=0.097  Sum_probs=109.5

Q ss_pred             CeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCC-----CcEEEEECCcce-----eeeeeccccccE
Q psy14511        218 TSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCT-----EYIDLWHEQEER-----LIQKLRTHMHQV  287 (488)
Q Consensus       218 ~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~-----~~i~i~d~~~~~-----~~~~~~~~~~~v  287 (488)
                      ..+..||..+.+......++. .......+.+  ++..++.+ +.+     ..+.+||..+.+     .+..+.......
T Consensus        31 ~~~~~~d~~~~~W~~~~~~p~-~r~~~~~~~~--~~~l~v~G-G~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~  106 (301)
T 2vpj_A           31 DVVEKYDPKTQEWSFLPSITR-KRRYVASVSL--HDRIYVIG-GYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLA  106 (301)
T ss_dssp             CCEEEEETTTTEEEECCCCSS-CCBSCEEEEE--TTEEEEEC-CBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSC
T ss_pred             eEEEEEcCCCCeEEeCCCCCh-hhccccEEEE--CCEEEEEc-CCCCCccCceEEEEECCCCCCCeeEECCCCCCCccce
Confidence            478999999887665544433 2222223332  45555555 433     468899987754     222222222222


Q ss_pred             EEEEecCCEEEEeecC-----CeEEEEECcCCC-ccceeeecCCccEEEEEEccCCcEEEEEe-c-----CeEEEEECCC
Q psy14511        288 IAMCWNGNLLSCGTIG-----GNILHYDVRTHS-DYPTAITREGDVVCGLKWSPNGRYLASGS-N-----NTVKIWDFRQ  355 (488)
Q Consensus       288 ~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d-----~~i~iwd~~~  355 (488)
                      .++..++++++.|+.+     ..+.+||+.+.. .....+.........+.  -++++++.|+ +     ..+.+||+.+
T Consensus       107 ~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~  184 (301)
T 2vpj_A          107 GATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVV--ASGVIYCLGGYDGLNILNSVEKYDPHT  184 (301)
T ss_dssp             EEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTT
T ss_pred             eEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEE--ECCEEEEECCCCCCcccceEEEEeCCC
Confidence            3344478888888754     368889987643 11111111111111222  2677777765 2     5688999876


Q ss_pred             CCCCc--ccce---eeeeecCCCCEEEEEccCC-----CCeEEEEeCCCcceeEE--EeeccccEEEEEEcCCCCEEEEE
Q psy14511        356 LDAKR--PLGL---IVPKLKREGRELVTSHGKQ-----DCSLKMWEYPRLHLIEE--LKIHQERILSAVLSPDQTCVAAA  423 (488)
Q Consensus       356 ~~~~~--~~~~---~~~~~~~~~~~l~~~~g~~-----~~~i~i~d~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~t~  423 (488)
                      .+-..  .+..   ...+...+++.++.  |+.     ...+.+||+.+.+-...  +.........+.  -+++.++.|
T Consensus       185 ~~W~~~~~~p~~r~~~~~~~~~~~i~v~--GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~G  260 (301)
T 2vpj_A          185 GHWTNVTPMATKRSGAGVALLNDHIYVV--GGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATV--LRGRLYAIA  260 (301)
T ss_dssp             TEEEEECCCSSCCBSCEEEEETTEEEEE--CCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEEC
T ss_pred             CcEEeCCCCCcccccceEEEECCEEEEE--eCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEE--ECCEEEEEc
Confidence            53211  1110   01133335555555  443     25689999987653322  111111112222  267777777


Q ss_pred             eCC-----CcEEEEecCCCC
Q psy14511        424 SAD-----ETISIWNCFPRD  438 (488)
Q Consensus       424 ~~d-----g~v~iw~~~~~~  438 (488)
                      +.+     ..+.+||+.+.+
T Consensus       261 G~~~~~~~~~v~~yd~~~~~  280 (301)
T 2vpj_A          261 GYDGNSLLSSIECYDPIIDS  280 (301)
T ss_dssp             CBCSSSBEEEEEEEETTTTE
T ss_pred             CcCCCcccccEEEEcCCCCe
Confidence            765     356777776654

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=97.57  E-value=0.037  Score=49.04  Aligned_cols=75  Identities=16%  Similarity=0.173  Sum_probs=46.7

Q ss_pred             eEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCccc---ccccccceeEEEEecC---CCeEEeeeCCccc---ceEE
Q psy14511         38 VVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVN---NQCHLSAVKAIAWCPW---EPTLLATGGGICD---QTVR  108 (488)
Q Consensus        38 ~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~---~~~h~~~v~~l~~~~~---~~~l~~~~~~~~d---~~i~  108 (488)
                      .-..++|.|+|+++++-.++.|.+++ . ++ ...+..   ..........|+|+|+   +..|+++.....+   ..|.
T Consensus        32 ~P~~ia~~pdG~l~V~e~~g~I~~i~-~-g~-~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~  108 (352)
T 2ism_A           32 VPWALAFLPDGGMLIAERPGRIRLFR-E-GR-LSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV  108 (352)
T ss_dssp             CEEEEEECTTSCEEEEETTTEEEEEE-T-TE-EEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred             CceEEEEcCCCeEEEEeCCCeEEEEE-C-CC-ccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence            45789999999977766589999998 2 22 111111   1112356789999998   5566665541001   5677


Q ss_pred             EEecCCC
Q psy14511        109 LWNSMNG  115 (488)
Q Consensus       109 vwd~~~~  115 (488)
                      .++...+
T Consensus       109 r~~~~~~  115 (352)
T 2ism_A          109 RLRHLGE  115 (352)
T ss_dssp             EEEECSS
T ss_pred             EEEeCCC
Confidence            7776543

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=97.56  E-value=0.033  Score=48.11  Aligned_cols=93  Identities=14%  Similarity=0.105  Sum_probs=54.7

Q ss_pred             CeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCC-----CcEEEEECCcceeeee--eccccccEEEE
Q psy14511        218 TSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCT-----EYIDLWHEQEERLIQK--LRTHMHQVIAM  290 (488)
Q Consensus       218 ~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~-----~~i~i~d~~~~~~~~~--~~~~~~~v~~~  290 (488)
                      ..+..||..+.+.......+. ......++.+  +++.++.+ +.+     ..+.+||+.+.+-...  +........++
T Consensus       175 ~~~~~~d~~~~~W~~~~~~p~-~r~~~~~~~~--~~~i~v~G-G~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~  250 (301)
T 2vpj_A          175 NSVEKYDPHTGHWTNVTPMAT-KRSGAGVALL--NDHIYVVG-GFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGAT  250 (301)
T ss_dssp             CCEEEEETTTTEEEEECCCSS-CCBSCEEEEE--TTEEEEEC-CBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE
T ss_pred             ceEEEEeCCCCcEEeCCCCCc-ccccceEEEE--CCEEEEEe-CCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEE
Confidence            568899999988776654443 2222333333  45555555 443     4689999987543322  22222222344


Q ss_pred             EecCCEEEEeecC-----CeEEEEECcCC
Q psy14511        291 CWNGNLLSCGTIG-----GNILHYDVRTH  314 (488)
Q Consensus       291 ~~~~~~l~~~~~d-----g~i~i~d~~~~  314 (488)
                      ..++++++.|+.+     ..+.+||+++.
T Consensus       251 ~~~~~i~v~GG~~~~~~~~~v~~yd~~~~  279 (301)
T 2vpj_A          251 VLRGRLYAIAGYDGNSLLSSIECYDPIID  279 (301)
T ss_dssp             EETTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred             EECCEEEEEcCcCCCcccccEEEEcCCCC
Confidence            4578888888765     35778887764

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=97.51  E-value=0.038  Score=47.55  Aligned_cols=65  Identities=9%  Similarity=0.092  Sum_probs=40.6

Q ss_pred             CcEEEEECC-CeEEEEECCCCceEEEEecC--CCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcc
Q psy14511        209 HDTLAVALD-TSVYTWNTKTNKTQLLVEYP--TYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEE  274 (488)
Q Consensus       209 ~~~~~~~~d-~~v~iw~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~  274 (488)
                      +-+++.+.. +.|...+.............  .......+.++++|+++.|++. ...|.+..+|+...
T Consensus       149 naYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~-~~~g~L~~fD~~~p  216 (334)
T 2p9w_A          149 NSYVAFALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAF-GGPRALTAFDVSKP  216 (334)
T ss_dssp             CEEEEEEESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEE-SSSSSEEEEECSSS
T ss_pred             CEEEeCCCCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEE-cCCCeEEEEcCCCC
Confidence            344445555 66666665544222111111  1023346799999999999999 55999999998853

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=97.49  E-value=0.024  Score=49.20  Aligned_cols=214  Identities=13%  Similarity=0.082  Sum_probs=113.3

Q ss_pred             CCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCC----CcEEEEECCcceeee--eeccccccEEEE
Q psy14511        217 DTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCT----EYIDLWHEQEERLIQ--KLRTHMHQVIAM  290 (488)
Q Consensus       217 d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~----~~i~i~d~~~~~~~~--~~~~~~~~v~~~  290 (488)
                      ...+..||..+++....-..+. .......+.+  ++..++.+ +.+    ..+.+||..+.+-..  .+.........+
T Consensus        23 ~~~~~~~d~~~~~W~~~~~~p~-~r~~~~~~~~--~~~lyv~G-G~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~   98 (306)
T 3ii7_A           23 PQSCRYFNPKDYSWTDIRCPFE-KRRDAACVFW--DNVVYILG-GSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAAC   98 (306)
T ss_dssp             TTSEEEEETTTTEEEECCCCSC-CCBSCEEEEE--TTEEEEEC-CBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEE
T ss_pred             CceEEEecCCCCCEecCCCCCc-ccceeEEEEE--CCEEEEEe-CCCCCCcceEEEEeCCCCeEEECCCCCccccceeEE
Confidence            4689999999988766555443 2333333333  45555555 533    568889988754322  222222222334


Q ss_pred             EecCCEEEEeecC------CeEEEEECcCCCc-cceeeecCCccEEEEEEccCCcEEEEEe-c---------CeEEEEEC
Q psy14511        291 CWNGNLLSCGTIG------GNILHYDVRTHSD-YPTAITREGDVVCGLKWSPNGRYLASGS-N---------NTVKIWDF  353 (488)
Q Consensus       291 ~~~~~~l~~~~~d------g~i~i~d~~~~~~-~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d---------~~i~iwd~  353 (488)
                      ..++++++.|+.+      ..+.+||..+..= ....+.........+.  -++++++.|+ +         ..+.+||+
T Consensus        99 ~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~yd~  176 (306)
T 3ii7_A           99 AAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE--ANGLIYVCGGSLGNNVSGRVLNSCEVYDP  176 (306)
T ss_dssp             EETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCEESCTTTCEECCCEEEEET
T ss_pred             EECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE--ECCEEEEECCCCCCCCcccccceEEEeCC
Confidence            4578888888765      4688999876430 0111111111111222  2677777765 2         34889998


Q ss_pred             CCCCCCc--ccce--e-eeeecCCCCEEEEEccCCC-----CeEEEEeCCCcceeE--EEeeccccEEEEEEcCCCCEEE
Q psy14511        354 RQLDAKR--PLGL--I-VPKLKREGRELVTSHGKQD-----CSLKMWEYPRLHLIE--ELKIHQERILSAVLSPDQTCVA  421 (488)
Q Consensus       354 ~~~~~~~--~~~~--~-~~~~~~~~~~l~~~~g~~~-----~~i~i~d~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~  421 (488)
                      .+..-..  .+..  . ......+++.++.  |+.+     ..+.+||+.+.+-..  .+.........+.+  ++++++
T Consensus       177 ~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~--GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v  252 (306)
T 3ii7_A          177 ATETWTELCPMIEARKNHGLVFVKDKIFAV--GGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYV  252 (306)
T ss_dssp             TTTEEEEECCCSSCCBSCEEEEETTEEEEE--CCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEE
T ss_pred             CCCeEEECCCccchhhcceEEEECCEEEEE--eCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEE
Confidence            7653211  1111  0 1123335555555  4432     468899998764322  22211112223333  777888


Q ss_pred             EEeCC-----CcEEEEecCCCCcc
Q psy14511        422 AASAD-----ETISIWNCFPRDKK  440 (488)
Q Consensus       422 t~~~d-----g~v~iw~~~~~~~~  440 (488)
                      .|+.+     ..+.+||+.+.+-.
T Consensus       253 ~GG~~~~~~~~~~~~yd~~~~~W~  276 (306)
T 3ii7_A          253 LAGFQGVGRLGHILEYNTETDKWV  276 (306)
T ss_dssp             EECBCSSSBCCEEEEEETTTTEEE
T ss_pred             EeCcCCCeeeeeEEEEcCCCCeEE
Confidence            88854     45788888776543

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=97.47  E-value=0.05  Score=48.18  Aligned_cols=75  Identities=11%  Similarity=-0.009  Sum_probs=46.4

Q ss_pred             ceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCcccc---cccccceeEEEEecC---CCeEEeeeCC-ccc----c
Q psy14511         37 DVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNN---QCHLSAVKAIAWCPW---EPTLLATGGG-ICD----Q  105 (488)
Q Consensus        37 ~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~---~~h~~~v~~l~~~~~---~~~l~~~~~~-~~d----~  105 (488)
                      ..-..|+|.|+|+++++-.++.|+++|. +++  ..+..+   .........|+|+|+   +..|+++... ..+    .
T Consensus        29 ~~P~~ia~~pdG~l~V~e~~g~I~~~d~-~G~--~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~  105 (354)
T 3a9g_A           29 EVPWSIAPLGGGRYLVTERPGRLVLISP-SGK--KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN  105 (354)
T ss_dssp             SCEEEEEEEETTEEEEEETTTEEEEECS-SCE--EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred             CCCeEEEEcCCCeEEEEeCCCEEEEEeC-CCc--eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence            3467899999999777766899999873 332  222111   112346789999998   5566655430 002    5


Q ss_pred             eEEEEecCC
Q psy14511        106 TVRLWNSMN  114 (488)
Q Consensus       106 ~i~vwd~~~  114 (488)
                      .|..|+...
T Consensus       106 ~v~r~~~~~  114 (354)
T 3a9g_A          106 RVIRGRLDG  114 (354)
T ss_dssp             EEEEEEECS
T ss_pred             EEEEEEECC
Confidence            666676654

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=97.45  E-value=0.14  Score=52.94  Aligned_cols=216  Identities=9%  Similarity=0.046  Sum_probs=112.5

Q ss_pred             eeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCC------CCeEEEEeCCCCcEEEEECCcc
Q psy14511        201 TSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPR------TTDLAVTNTCTEYIDLWHEQEE  274 (488)
Q Consensus       201 ~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------~~~l~~~~~~~~~i~i~d~~~~  274 (488)
                      +...+..+.+++.+. ++.+.++++..++........  ....|.|+++.|.      +++++++...|++++|+++...
T Consensus       516 I~~As~n~~~vvva~-g~~l~~fel~~~~L~~~~~~~--l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l  592 (1158)
T 3ei3_A          516 ISVASCNSSQVVVAV-GRALYYLQIHPQELRQISHTE--MEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSF  592 (1158)
T ss_dssp             CCEEEECSSEEEEEE-TTEEEEEEEETTEEEEEEEEE--CSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTC
T ss_pred             EEEEEeCCCEEEEEE-CCEEEEEEeeCCceeeecccC--CCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCC
Confidence            333344445555554 678888888766544433322  4567999999864      3688888334999999999875


Q ss_pred             eeeeeeccc-cccEEEEEe---c-CCEEEEeecCCeEEEEECcC--CCcc--ceeeecCCccEEEEEEccCC-cEEEEEe
Q psy14511        275 RLIQKLRTH-MHQVIAMCW---N-GNLLSCGTIGGNILHYDVRT--HSDY--PTAITREGDVVCGLKWSPNG-RYLASGS  344 (488)
Q Consensus       275 ~~~~~~~~~-~~~v~~~~~---~-~~~l~~~~~dg~i~i~d~~~--~~~~--~~~~~~~~~~i~~~~~s~~~-~~l~~~~  344 (488)
                      +.+....-. .....++..   + ..+|..|-.||.+.-+.+..  +...  .....+ ..++.-..+...+ ..+.+++
T Consensus       593 ~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s  671 (1158)
T 3ei3_A          593 ELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFACS  671 (1158)
T ss_dssp             CEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEEEEES
T ss_pred             CeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccceeEEcC-CCceEEEEEeeCCceeEEEEC
Confidence            554432211 123333433   3 35788888999887665542  2110  111222 2334333333333 2334444


Q ss_pred             cCeEEEEECCCCCCCcccc----eeeeeecCC--CCEEEEEccCCCCeEEEEeCCCcce--eEEEeeccccEEEEEEcCC
Q psy14511        345 NNTVKIWDFRQLDAKRPLG----LIVPKLKRE--GRELVTSHGKQDCSLKMWEYPRLHL--IEELKIHQERILSAVLSPD  416 (488)
Q Consensus       345 d~~i~iwd~~~~~~~~~~~----~~~~~~~~~--~~~l~~~~g~~~~~i~i~d~~~~~~--~~~~~~~~~~v~~~~~s~~  416 (488)
                      +....+|.-+..-...++.    .....|+..  ..-++.+   .++.++|..+.+.+.  ++++. -...+..++++|+
T Consensus       672 ~rp~liy~~~~~l~~s~l~~~~v~~~~~F~se~~~~g~v~~---~~~~LrI~~i~~~~~~~~~~ip-L~~Tprri~y~~~  747 (1158)
T 3ei3_A          672 DRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALA---NNSTLTIGTIDEIQKLHIRTVP-LYESPRKICYQEV  747 (1158)
T ss_dssp             SSCEEEEESSSSEEEEEBSSSCCCEEEEECCSSSTTEEEEE---CSSCEEEEEECCSSSEEEEEEE-CSSEEEEEEEEGG
T ss_pred             CCCEEEEEcCCceEEeccChHHhceEeccCcccCCCcEEEE---cCCceEEEEecccCCeeEEEEe-CCCCceEEEEcCC
Confidence            5433344322110000000    012244332  2344442   245588887754332  22232 2456889999998


Q ss_pred             CCEEEEEe
Q psy14511        417 QTCVAAAS  424 (488)
Q Consensus       417 ~~~l~t~~  424 (488)
                      .+.++.+.
T Consensus       748 ~~~~~v~~  755 (1158)
T 3ei3_A          748 SQCFGVLS  755 (1158)
T ss_dssp             GTEEEEEE
T ss_pred             CCEEEEEE
Confidence            88766554

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=97.45  E-value=0.052  Score=47.72  Aligned_cols=186  Identities=9%  Similarity=0.062  Sum_probs=105.4

Q ss_pred             eEEEEEcCCCCeEEEEeC------------CCCcEEEEECCcc--ee-eeeecc-----ccccEEEEEe----cCC--EE
Q psy14511        244 ISCVAWKPRTTDLAVTNT------------CTEYIDLWHEQEE--RL-IQKLRT-----HMHQVIAMCW----NGN--LL  297 (488)
Q Consensus       244 i~~~~~~~~~~~l~~~~~------------~~~~i~i~d~~~~--~~-~~~~~~-----~~~~v~~~~~----~~~--~l  297 (488)
                      ...++..|+| .++++++            .+|.|.++|.++.  +. ...+.+     .......+.+    ++.  ++
T Consensus        52 ~EDi~~~~~G-~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~  130 (355)
T 3sre_A           52 SEDLEILPNG-LAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL  130 (355)
T ss_dssp             CCEEEECTTS-EEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred             cceeEEcCCC-eEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence            4456677766 4444421            6899999998732  21 112222     2235566665    243  44


Q ss_pred             EEeec--CCeEEEEECcCCCccce---eeec-CCccEEEEEEccCCcEEEEEe-----------------c-CeEEEEEC
Q psy14511        298 SCGTI--GGNILHYDVRTHSDYPT---AITR-EGDVVCGLKWSPNGRYLASGS-----------------N-NTVKIWDF  353 (488)
Q Consensus       298 ~~~~~--dg~i~i~d~~~~~~~~~---~~~~-~~~~i~~~~~s~~~~~l~~~~-----------------d-~~i~iwd~  353 (488)
                      ++-..  +..+.+|++........   .+.+ .-...+.+++.++|++.++..                 . +.+..+|.
T Consensus       131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~  210 (355)
T 3sre_A          131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP  210 (355)
T ss_dssp             EEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT
T ss_pred             EEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC
Confidence            44333  56788888765432222   2222 124578999999999887754                 1 34444444


Q ss_pred             CCCCCCccccee--ee--eecCCCCEEEEEccCCCCeEEEEeCCC-cce--eEEEeeccccEEEEEEcC-CCCEEEEEeC
Q psy14511        354 RQLDAKRPLGLI--VP--KLKREGRELVTSHGKQDCSLKMWEYPR-LHL--IEELKIHQERILSAVLSP-DQTCVAAASA  425 (488)
Q Consensus       354 ~~~~~~~~~~~~--~~--~~~~~~~~l~~~~g~~~~~i~i~d~~~-~~~--~~~~~~~~~~v~~~~~s~-~~~~l~t~~~  425 (488)
                        .+.......+  .+  +|+||++.++++ .+..+.|..|++.. ++.  ...+ ...+..-.+++.+ +|++.+++..
T Consensus       211 --~~~~~~~~~l~~pNGia~spDg~~lYva-dt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~  286 (355)
T 3sre_A          211 --NDVRVVAEGFDFANGINISPDGKYVYIA-ELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHP  286 (355)
T ss_dssp             --TCCEEEEEEESSEEEEEECTTSSEEEEE-EGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEES
T ss_pred             --CeEEEeecCCcccCcceECCCCCEEEEE-eCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecC
Confidence              3221111111  11  999999998886 45678999999853 332  2233 2345667889998 5888877764


Q ss_pred             C-CcEEEEec
Q psy14511        426 D-ETISIWNC  434 (488)
Q Consensus       426 d-g~v~iw~~  434 (488)
                      + +.|..|+.
T Consensus       287 ~g~~v~~~~P  296 (355)
T 3sre_A          287 NGMRIFFYDA  296 (355)
T ss_dssp             CHHHHHSCCT
T ss_pred             CceEEEEECC
Confidence            4 34444443

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=97.41  E-value=0.014  Score=50.08  Aligned_cols=152  Identities=10%  Similarity=0.092  Sum_probs=101.4

Q ss_pred             eeeeeeeCC--CcEEEEE-CCCeEEEEECCCCceEEEEecCC-----CCCCceEEEEE---cCCCCeEEEEeC-------
Q psy14511        200 YTSGLDWGY--HDTLAVA-LDTSVYTWNTKTNKTQLLVEYPT-----YDNAYISCVAW---KPRTTDLAVTNT-------  261 (488)
Q Consensus       200 ~~~~~~~~~--~~~~~~~-~d~~v~iw~~~~~~~~~~~~~~~-----~~~~~i~~~~~---~~~~~~l~~~~~-------  261 (488)
                      +..+..|+.  +.++.+. ..+.|..|+...+..... .+++     .....+..+.+   .|+++.+++. .       
T Consensus        14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~-~~~~af~~   91 (334)
T 2p9w_A           14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVM-KNAKSFNF   91 (334)
T ss_dssp             CCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEE-EETTTTCT
T ss_pred             CCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEE-cccccccc
Confidence            444566754  7778877 799999999986655544 4432     11234689999   6887777655 3       


Q ss_pred             ------CCCcEEEEECC---cceeeeeec--cc-----------cccEEEEEe--cCCEEEEeecC-CeEEEEECcCCCc
Q psy14511        262 ------CTEYIDLWHEQ---EERLIQKLR--TH-----------MHQVIAMCW--NGNLLSCGTIG-GNILHYDVRTHSD  316 (488)
Q Consensus       262 ------~~~~i~i~d~~---~~~~~~~~~--~~-----------~~~v~~~~~--~~~~l~~~~~d-g~i~i~d~~~~~~  316 (488)
                            .+..|..||+.   +++.+....  ..           ......++.  +|+..++++.. +.|...+....  
T Consensus        92 ~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~--  169 (334)
T 2p9w_A           92 ADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK--  169 (334)
T ss_dssp             TSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC--
T ss_pred             cccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC--
Confidence                  26779999998   666654432  11           124667777  58888888888 88777776542  


Q ss_pred             cceeee--c----CCccEEEEEEccCCcEEEEEe-cCeEEEEECCC
Q psy14511        317 YPTAIT--R----EGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQ  355 (488)
Q Consensus       317 ~~~~~~--~----~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~  355 (488)
                      ....+.  .    .....+.++++|+|+.|++.. .+.+..+|+..
T Consensus       170 ~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~  215 (334)
T 2p9w_A          170 TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK  215 (334)
T ss_dssp             CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred             EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence            122111  1    112256899999999888877 59999999874

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=97.36  E-value=0.041  Score=47.53  Aligned_cols=212  Identities=13%  Similarity=0.138  Sum_probs=109.4

Q ss_pred             CeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCC-----CcEEEEECCcceeee--eeccccccEEEE
Q psy14511        218 TSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCT-----EYIDLWHEQEERLIQ--KLRTHMHQVIAM  290 (488)
Q Consensus       218 ~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~-----~~i~i~d~~~~~~~~--~~~~~~~~v~~~  290 (488)
                      ..+..||..+.+....-.++. ....-..+.+  ++..++.+ +.+     ..+.+||..+.+-..  .+........+.
T Consensus        30 ~~~~~~d~~~~~W~~~~~~p~-~r~~~~~~~~--~~~lyv~G-G~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~  105 (302)
T 2xn4_A           30 RSVECYDFKEERWHQVAELPS-RRCRAGMVYM--AGLVFAVG-GFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAA  105 (302)
T ss_dssp             CCEEEEETTTTEEEEECCCSS-CCBSCEEEEE--TTEEEEES-CBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE
T ss_pred             CcEEEEcCcCCcEeEcccCCc-ccccceEEEE--CCEEEEEe-CcCCCccccceEEECCCCCceeeCCCCCccccceEEE
Confidence            468889999887666544443 2222223333  45555555 433     358889987754322  222222222344


Q ss_pred             EecCCEEEEeecCC-----eEEEEECcCCCc-cceeeecCCccEEEEEEccCCcEEEEEe-c-------CeEEEEECCCC
Q psy14511        291 CWNGNLLSCGTIGG-----NILHYDVRTHSD-YPTAITREGDVVCGLKWSPNGRYLASGS-N-------NTVKIWDFRQL  356 (488)
Q Consensus       291 ~~~~~~l~~~~~dg-----~i~i~d~~~~~~-~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d-------~~i~iwd~~~~  356 (488)
                      ..++.+++.|+.++     .+.+||+.+..= ....+.........+.  -++++++.|+ +       ..+.+||+.+.
T Consensus       106 ~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~  183 (302)
T 2xn4_A          106 VLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGV--VGGLLYAVGGYDVASRQCLSTVECYNATTN  183 (302)
T ss_dssp             EETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCEETTTTEECCCEEEEETTTT
T ss_pred             EECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEE--ECCEEEEEeCCCCCCCccccEEEEEeCCCC
Confidence            45788888887664     577888876430 1111111111111222  2667777765 2       34889998765


Q ss_pred             CCCc--ccc--ee-eeeecCCCCEEEEEccCCC-----CeEEEEeCCCcceeEE--EeeccccEEEEEEcCCCCEEEEEe
Q psy14511        357 DAKR--PLG--LI-VPKLKREGRELVTSHGKQD-----CSLKMWEYPRLHLIEE--LKIHQERILSAVLSPDQTCVAAAS  424 (488)
Q Consensus       357 ~~~~--~~~--~~-~~~~~~~~~~l~~~~g~~~-----~~i~i~d~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~t~~  424 (488)
                      .-..  .+.  .. ......+++.++.  |+.+     ..+.+||+.+.+-...  +......-..+.  .+++.++.|+
T Consensus       184 ~W~~~~~~p~~r~~~~~~~~~~~iyv~--GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~~~i~v~GG  259 (302)
T 2xn4_A          184 EWTYIAEMSTRRSGAGVGVLNNLLYAV--GGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCA--VNGLLYVVGG  259 (302)
T ss_dssp             EEEEECCCSSCCBSCEEEEETTEEEEE--CCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECC
T ss_pred             cEEECCCCccccccccEEEECCEEEEE--CCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEE--ECCEEEEECC
Confidence            3211  111  11 1133335555555  4432     4689999987643321  111111111222  3677888887


Q ss_pred             CCC-----cEEEEecCCCCc
Q psy14511        425 ADE-----TISIWNCFPRDK  439 (488)
Q Consensus       425 ~dg-----~v~iw~~~~~~~  439 (488)
                      .++     .+.+||+.+.+-
T Consensus       260 ~~~~~~~~~v~~yd~~~~~W  279 (302)
T 2xn4_A          260 DDGSCNLASVEYYNPTTDKW  279 (302)
T ss_dssp             BCSSSBCCCEEEEETTTTEE
T ss_pred             cCCCcccccEEEEcCCCCeE
Confidence            653     488888877653

>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A

Probab=97.33  E-value=0.03  Score=57.72  Aligned_cols=229  Identities=10%  Similarity=0.110  Sum_probs=146.9

Q ss_pred             eeeeeCCCcEEEEE----CCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceee
Q psy14511        202 SGLDWGYHDTLAVA----LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLI  277 (488)
Q Consensus       202 ~~~~~~~~~~~~~~----~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~  277 (488)
                      ..+...++++++.-    ....|.+.|+..+.......      -..-+.-.+|..+.++.-  ...++.+||+.+...+
T Consensus        28 ~~~T~eSDkyicvre~~~~~~~vvIidl~~~~~~~rrp------i~AdsAIMnP~~~iiALr--ag~~lQiFnl~~k~kl   99 (1630)
T 1xi4_A           28 STLTMESDKFICIREKVGEQAQVVIIDMNDPSNPIRRP------ISADSAIMNPASKVIALK--AGKTLQIFNIEMKSKM   99 (1630)
T ss_pred             cceeeecCceEEEEecCCCCceEEEEECCCCCCccccc------ccchhhccCCCcceEEEe--cCCeEEEeehHHhhhh
Confidence            34555566677654    33478888888766432222      223345578888877777  4789999999988777


Q ss_pred             eeeccccccEEEEEe-cCCEEEEeecCCeEEEEECcCCCccceeeecC----CccEEEEEEccCCcEEEEEe--------
Q psy14511        278 QKLRTHMHQVIAMCW-NGNLLSCGTIGGNILHYDVRTHSDYPTAITRE----GDVVCGLKWSPNGRYLASGS--------  344 (488)
Q Consensus       278 ~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~----~~~i~~~~~s~~~~~l~~~~--------  344 (488)
                      ....- ..+|.--.| +.+.|+..+ +..|+.|++.....+.+.+..|    ...|..-..+++.++++..+        
T Consensus       100 ks~~~-~e~VvfWkWis~~~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v  177 (1630)
T 1xi4_A          100 KAHTM-TDDVTFWKWISLNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRV  177 (1630)
T ss_pred             ccccc-CCCceEEEecCCCeeEEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcc
Confidence            76653 446777777 677776665 4569999997655566555555    45677888899999887543        


Q ss_pred             cCeEEEEECCCCCCCcccceeeeee--------cCCCCEEEEEc-cCCCCeEEEEeCCCc---ceeE------EEe---e
Q psy14511        345 NNTVKIWDFRQLDAKRPLGLIVPKL--------KREGRELVTSH-GKQDCSLKMWEYPRL---HLIE------ELK---I  403 (488)
Q Consensus       345 d~~i~iwd~~~~~~~~~~~~~~~~~--------~~~~~~l~~~~-g~~~~~i~i~d~~~~---~~~~------~~~---~  403 (488)
                      .|.+.+|..+.... +.+..+..+|        .+....+..+. ....+.++|.++...   ....      .+.   .
T Consensus       178 ~G~mQLyS~er~~s-Q~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~  256 (1630)
T 1xi4_A          178 VGAMQLYSVDRKVS-QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEA  256 (1630)
T ss_pred             cceeeeeecccccc-hhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCccc
Confidence            17889998875432 3343333322        12223333321 122468888888432   1111      111   1


Q ss_pred             ccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccc
Q psy14511        404 HQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKR  441 (488)
Q Consensus       404 ~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~  441 (488)
                      ..+-..++..|+.-..+..-+.-|.|.++|+.++..+.
T Consensus       257 ~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~  294 (1630)
T 1xi4_A          257 QNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIY  294 (1630)
T ss_pred             ccCcceEEEeccccCEEEEEecCceEEEEecccchhhh
Confidence            12334567778877788888899999999999998874

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=97.32  E-value=0.044  Score=47.71  Aligned_cols=216  Identities=10%  Similarity=0.055  Sum_probs=109.6

Q ss_pred             CeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeC-----C-C----CcEEEEECCcceeee--eeccccc
Q psy14511        218 TSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNT-----C-T----EYIDLWHEQEERLIQ--KLRTHMH  285 (488)
Q Consensus       218 ~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-----~-~----~~i~i~d~~~~~~~~--~~~~~~~  285 (488)
                      ..+..||..+++... ...+. ........+...++..++.+|.     . .    ..+..||..+.+-..  .+.....
T Consensus        13 ~~~~~yd~~~~~W~~-~~~~~-p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~   90 (315)
T 4asc_A           13 EGAVAYDPAANECYC-ASLSS-QVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRC   90 (315)
T ss_dssp             TEEEEEETTTTEEEE-EECCC-CSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEE
T ss_pred             CceEEECCCCCeEec-CCCCC-CCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchh
Confidence            789999999988654 44332 1122333333456777777742     1 1    127788887754322  1211111


Q ss_pred             cEEEEEecCCEEEEeecC--------CeEEEEECcCCC-ccceeeecCCccEEEEEEccCCcEEEEEec-------CeEE
Q psy14511        286 QVIAMCWNGNLLSCGTIG--------GNILHYDVRTHS-DYPTAITREGDVVCGLKWSPNGRYLASGSN-------NTVK  349 (488)
Q Consensus       286 ~v~~~~~~~~~l~~~~~d--------g~i~i~d~~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d-------~~i~  349 (488)
                      .......++.+++.|+.+        ..+.+||..+.. .....+....... +++ .-++++++.|+.       ..+.
T Consensus        91 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~-~~~~~iyv~GG~~~~~~~~~~~~  168 (315)
T 4asc_A           91 LFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGH-TVL-SHMDLVYVIGGKGSDRKCLNKMC  168 (315)
T ss_dssp             SCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSC-EEE-EETTEEEEECCBCTTSCBCCCEE
T ss_pred             ceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccce-eEE-EECCEEEEEeCCCCCCcccceEE
Confidence            122334477888887743        458899987643 1111111111111 122 246677777652       4689


Q ss_pred             EEECCCCCCC--ccccee---eeeecCCCCEEEEEccCCC----CeEEEEeCCCcceeEE--EeeccccEEEEEEcCCCC
Q psy14511        350 IWDFRQLDAK--RPLGLI---VPKLKREGRELVTSHGKQD----CSLKMWEYPRLHLIEE--LKIHQERILSAVLSPDQT  418 (488)
Q Consensus       350 iwd~~~~~~~--~~~~~~---~~~~~~~~~~l~~~~g~~~----~~i~i~d~~~~~~~~~--~~~~~~~v~~~~~s~~~~  418 (488)
                      +||..+.+-.  ..+...   ..+...+++.++.. |..+    ..+.+||+.+.+-...  +.........+.  -+++
T Consensus       169 ~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~G-G~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~  245 (315)
T 4asc_A          169 VYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAA-GVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVS--LVGT  245 (315)
T ss_dssp             EEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEE-EECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTE
T ss_pred             EEeCCCCeEEECCCCCCchhceEEEEECCEEEEEe-ccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEE--ECCE
Confidence            9998765311  111111   11333355555552 3322    2588999987643322  111111112222  2677


Q ss_pred             EEEEEeCCC--------------cEEEEecCCCCcc
Q psy14511        419 CVAAASADE--------------TISIWNCFPRDKK  440 (488)
Q Consensus       419 ~l~t~~~dg--------------~v~iw~~~~~~~~  440 (488)
                      +++.|+.++              .+.+||+.+.+-.
T Consensus       246 l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~  281 (315)
T 4asc_A          246 LYAIGGFATLETESGELVPTELNDIWRYNEEEKKWE  281 (315)
T ss_dssp             EEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEE
T ss_pred             EEEECCccccCcCCccccccccCcEEEecCCCChhh
Confidence            778877642              3677887766543

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=97.21  E-value=0.061  Score=46.60  Aligned_cols=212  Identities=9%  Similarity=0.045  Sum_probs=108.7

Q ss_pred             CeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCC----C-----CcEEEEECCcceeee--eecccccc
Q psy14511        218 TSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTC----T-----EYIDLWHEQEERLIQ--KLRTHMHQ  286 (488)
Q Consensus       218 ~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~----~-----~~i~i~d~~~~~~~~--~~~~~~~~  286 (488)
                      ..+.+||..+.+....-..+. .......+.+  ++..++.+ +.    +     ..+.+||..+.+-..  .+......
T Consensus        39 ~~~~~~d~~~~~W~~~~~~p~-~r~~~~~~~~--~~~lyv~G-G~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~  114 (308)
T 1zgk_A           39 SYLEAYNPSNGTWLRLADLQV-PRSGLAGCVV--GGLLYAVG-GRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNR  114 (308)
T ss_dssp             CCEEEEETTTTEEEECCCCSS-CCBSCEEEEE--TTEEEEEC-CEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBT
T ss_pred             ceEEEEcCCCCeEeECCCCCc-ccccceEEEE--CCEEEEEC-CCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccc
Confidence            478999999888766544443 2222222322  45555555 43    2     468889987754322  22222222


Q ss_pred             EEEEEecCCEEEEeecC-----CeEEEEECcCCC-ccceeeecCCccEEEEEEccCCcEEEEEe-c-----CeEEEEECC
Q psy14511        287 VIAMCWNGNLLSCGTIG-----GNILHYDVRTHS-DYPTAITREGDVVCGLKWSPNGRYLASGS-N-----NTVKIWDFR  354 (488)
Q Consensus       287 v~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d-----~~i~iwd~~  354 (488)
                      ......++++++.|+.+     ..+.+||..+.. .....+.........+.+  ++++++.|+ +     ..+.+||+.
T Consensus       115 ~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~  192 (308)
T 1zgk_A          115 IGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPE  192 (308)
T ss_dssp             CEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETT
T ss_pred             cEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCC
Confidence            23444578888887754     358889987643 111111111111122222  677777765 2     468899987


Q ss_pred             CCCCCc--ccce---eeeeecCCCCEEEEEccCCC-----CeEEEEeCCCcceeE--EEeeccccEEEEEEcCCCCEEEE
Q psy14511        355 QLDAKR--PLGL---IVPKLKREGRELVTSHGKQD-----CSLKMWEYPRLHLIE--ELKIHQERILSAVLSPDQTCVAA  422 (488)
Q Consensus       355 ~~~~~~--~~~~---~~~~~~~~~~~l~~~~g~~~-----~~i~i~d~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~t  422 (488)
                      +.+-..  .+..   ...+..-+++.++.  |+.+     ..+.+||+.+.+-..  .+.........+.  -++++++.
T Consensus       193 ~~~W~~~~~~p~~r~~~~~~~~~~~iyv~--GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~  268 (308)
T 1zgk_A          193 RNEWRMITAMNTIRSGAGVCVLHNCIYAA--GGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITV--HQGRIYVL  268 (308)
T ss_dssp             TTEEEECCCCSSCCBSCEEEEETTEEEEE--CCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEE
T ss_pred             CCeEeeCCCCCCccccceEEEECCEEEEE--eCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEE--ECCEEEEE
Confidence            653211  1110   01122335555555  4433     568999998764322  1111111112222  26777777


Q ss_pred             EeCC-----CcEEEEecCCCCc
Q psy14511        423 ASAD-----ETISIWNCFPRDK  439 (488)
Q Consensus       423 ~~~d-----g~v~iw~~~~~~~  439 (488)
                      |+.+     ..+.+||+.+.+-
T Consensus       269 GG~~~~~~~~~v~~yd~~~~~W  290 (308)
T 1zgk_A          269 GGYDGHTFLDSVECYDPDTDTW  290 (308)
T ss_dssp             CCBCSSCBCCEEEEEETTTTEE
T ss_pred             cCcCCCcccceEEEEcCCCCEE
Confidence            7754     3467777776543

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=97.13  E-value=0.11  Score=45.94  Aligned_cols=218  Identities=9%  Similarity=-0.013  Sum_probs=117.3

Q ss_pred             CceEEEEEcCCCCeEEEEeCCCCcEEEEECCcce-eeeeec---cccccEEEEEec-----CCEEEEeec----C----C
Q psy14511        242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEER-LIQKLR---THMHQVIAMCWN-----GNLLSCGTI----G----G  304 (488)
Q Consensus       242 ~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~-~~~~~~---~~~~~v~~~~~~-----~~~l~~~~~----d----g  304 (488)
                      .....++|.|+|+ |+++ ..+|.|++++. .++ .+..+.   ........++++     +..|+.+..    +    .
T Consensus        29 ~~P~~ia~~pdG~-l~V~-e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~  105 (354)
T 3a9g_A           29 EVPWSIAPLGGGR-YLVT-ERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN  105 (354)
T ss_dssp             SCEEEEEEEETTE-EEEE-ETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred             CCCeEEEEcCCCe-EEEE-eCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence            4578999999997 4455 56799999974 333 222221   123457788884     345555443    2    5


Q ss_pred             eEEEEECcCCC------c-cceeeec-CCccEEEEEEccCCcEEEEEec--------------CeEEEEECCCCCCC--c
Q psy14511        305 NILHYDVRTHS------D-YPTAITR-EGDVVCGLKWSPNGRYLASGSN--------------NTVKIWDFRQLDAK--R  360 (488)
Q Consensus       305 ~i~i~d~~~~~------~-~~~~~~~-~~~~i~~~~~s~~~~~l~~~~d--------------~~i~iwd~~~~~~~--~  360 (488)
                      .|..|+.....      + ....+.. .......++|.|||.+.++.++              +.|.-++... +..  .
T Consensus       106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG-~~p~~n  184 (354)
T 3a9g_A          106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEG-RPPADN  184 (354)
T ss_dssp             EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTS-CCCTTS
T ss_pred             EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCC-CCCCCC
Confidence            67777765431      1 1111221 1112457999999987776543              3455555432 100  0


Q ss_pred             ---cccee--------eeeecC-CCCEEEEEccCCC-CeEEEEeCCC----------------cceeEEEeeccccEEEE
Q psy14511        361 ---PLGLI--------VPKLKR-EGRELVTSHGKQD-CSLKMWEYPR----------------LHLIEELKIHQERILSA  411 (488)
Q Consensus       361 ---~~~~~--------~~~~~~-~~~~l~~~~g~~~-~~i~i~d~~~----------------~~~~~~~~~~~~~v~~~  411 (488)
                         ....+        -.+|+| +++..++-.+... ..|.+.....                ..++..+.........+
T Consensus       185 pf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~  264 (354)
T 3a9g_A          185 PFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGA  264 (354)
T ss_dssp             SSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEE
T ss_pred             CCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcce
Confidence               00111        117888 6666665432221 1233332110                01222331122357788


Q ss_pred             EEc-------CCCCEEEEEeCCCcEEEEecCCC-Ccc---ccc-cccCCcceEEeecCCCceEE
Q psy14511        412 VLS-------PDQTCVAAASADETISIWNCFPR-DKK---RKA-RQVGSGSSLEFAILKQPVSL  463 (488)
Q Consensus       412 ~~s-------~~~~~l~t~~~dg~v~iw~~~~~-~~~---~~~-~~~~~v~~~~~s~~~~~~~~  463 (488)
                      +|.       .+|.++++.-..+.|...++... +..   ... .....+..+++.|||..+..
T Consensus       265 ~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~  328 (354)
T 3a9g_A          265 SFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILIS  328 (354)
T ss_dssp             EECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEE
T ss_pred             EEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEE
Confidence            883       57777777767788888888753 221   111 22457889999999965543

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=97.13  E-value=0.11  Score=45.05  Aligned_cols=94  Identities=9%  Similarity=0.160  Sum_probs=52.8

Q ss_pred             CeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCC----cEEEEECCcceeeee--eccccccEEEEE
Q psy14511        218 TSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTE----YIDLWHEQEERLIQK--LRTHMHQVIAMC  291 (488)
Q Consensus       218 ~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~----~i~i~d~~~~~~~~~--~~~~~~~v~~~~  291 (488)
                      ..+.+||..+.+.......+. ......++.+  +++.++.+|..+.    .+.+||..+.+-...  +.........+.
T Consensus       165 ~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~  241 (315)
T 4asc_A          165 NKMCVYDPKKFEWKELAPMQT-ARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVS  241 (315)
T ss_dssp             CCEEEEETTTTEEEECCCCSS-CCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE
T ss_pred             ceEEEEeCCCCeEEECCCCCC-chhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEE
Confidence            468999999887766554443 2222233333  5566666633222    588889877543222  222222223444


Q ss_pred             ecCCEEEEeecCC--------------eEEEEECcCC
Q psy14511        292 WNGNLLSCGTIGG--------------NILHYDVRTH  314 (488)
Q Consensus       292 ~~~~~l~~~~~dg--------------~i~i~d~~~~  314 (488)
                      .++++++.|+.++              .+.+||+.+.
T Consensus       242 ~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~  278 (315)
T 4asc_A          242 LVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEK  278 (315)
T ss_dssp             ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTT
T ss_pred             ECCEEEEECCccccCcCCccccccccCcEEEecCCCC
Confidence            5788888887642              3667777653

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=97.09  E-value=0.12  Score=44.67  Aligned_cols=94  Identities=13%  Similarity=0.074  Sum_probs=55.3

Q ss_pred             CCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCC-----CcEEEEECCcceee--eeeccccccEEE
Q psy14511        217 DTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCT-----EYIDLWHEQEERLI--QKLRTHMHQVIA  289 (488)
Q Consensus       217 d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~-----~~i~i~d~~~~~~~--~~~~~~~~~v~~  289 (488)
                      -..+.+||..+.+....-..+. .......+.+  +++.++.+ +.+     ..+.+||+.+.+-.  ..+........+
T Consensus       168 ~~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~~--~~~i~v~G-G~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~  243 (306)
T 3ii7_A          168 LNSCEVYDPATETWTELCPMIE-ARKNHGLVFV--KDKIFAVG-GQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKC  243 (306)
T ss_dssp             CCCEEEEETTTTEEEEECCCSS-CCBSCEEEEE--TTEEEEEC-CEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEE
T ss_pred             cceEEEeCCCCCeEEECCCccc-hhhcceEEEE--CCEEEEEe-CCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeE
Confidence            4568899999988766655443 2222233333  45555555 432     46889998875432  222222222344


Q ss_pred             EEecCCEEEEeecC-----CeEEEEECcCC
Q psy14511        290 MCWNGNLLSCGTIG-----GNILHYDVRTH  314 (488)
Q Consensus       290 ~~~~~~~l~~~~~d-----g~i~i~d~~~~  314 (488)
                      +..++++++.|+.+     ..+.+||+.+.
T Consensus       244 ~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~  273 (306)
T 3ii7_A          244 AAVGSIVYVLAGFQGVGRLGHILEYNTETD  273 (306)
T ss_dssp             EEETTEEEEEECBCSSSBCCEEEEEETTTT
T ss_pred             EEECCEEEEEeCcCCCeeeeeEEEEcCCCC
Confidence            44588888888854     46888888764

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=97.09  E-value=0.12  Score=44.72  Aligned_cols=93  Identities=11%  Similarity=0.121  Sum_probs=53.4

Q ss_pred             CeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCC-----CcEEEEECCcceeee--eeccccccEEEE
Q psy14511        218 TSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCT-----EYIDLWHEQEERLIQ--KLRTHMHQVIAM  290 (488)
Q Consensus       218 ~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~-----~~i~i~d~~~~~~~~--~~~~~~~~v~~~  290 (488)
                      ..+..||+.+.+.......+. ......++.+  +++.++.+ +.+     ..+.+||+.+.+-..  .+.........+
T Consensus       184 ~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~~--~~~iyv~G-G~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~  259 (308)
T 1zgk_A          184 NSAECYYPERNEWRMITAMNT-IRSGAGVCVL--HNCIYAAG-GYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGIT  259 (308)
T ss_dssp             CCEEEEETTTTEEEECCCCSS-CCBSCEEEEE--TTEEEEEC-CBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEE
T ss_pred             ceEEEEeCCCCeEeeCCCCCC-ccccceEEEE--CCEEEEEe-CCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEE
Confidence            568899998887765544433 2223333333  45555555 443     568999988754332  222112222334


Q ss_pred             EecCCEEEEeecC-----CeEEEEECcCC
Q psy14511        291 CWNGNLLSCGTIG-----GNILHYDVRTH  314 (488)
Q Consensus       291 ~~~~~~l~~~~~d-----g~i~i~d~~~~  314 (488)
                      ..++++++.|+.+     ..+.+||+.+.
T Consensus       260 ~~~~~i~v~GG~~~~~~~~~v~~yd~~~~  288 (308)
T 1zgk_A          260 VHQGRIYVLGGYDGHTFLDSVECYDPDTD  288 (308)
T ss_dssp             EETTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred             EECCEEEEEcCcCCCcccceEEEEcCCCC
Confidence            4478888888754     35677777653

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=96.93  E-value=0.17  Score=43.66  Aligned_cols=93  Identities=17%  Similarity=0.178  Sum_probs=54.5

Q ss_pred             CeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCC-----CcEEEEECCcceeee--eeccccccEEEE
Q psy14511        218 TSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCT-----EYIDLWHEQEERLIQ--KLRTHMHQVIAM  290 (488)
Q Consensus       218 ~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~-----~~i~i~d~~~~~~~~--~~~~~~~~v~~~  290 (488)
                      ..+..||..+.+.......+. ......++.+  +++.++.+ +.+     ..+.+||..+.+-..  .+.........+
T Consensus       173 ~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~~--~~~iyv~G-G~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~  248 (302)
T 2xn4_A          173 STVECYNATTNEWTYIAEMST-RRSGAGVGVL--NNLLYAVG-GHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVC  248 (302)
T ss_dssp             CCEEEEETTTTEEEEECCCSS-CCBSCEEEEE--TTEEEEEC-CBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE
T ss_pred             cEEEEEeCCCCcEEECCCCcc-ccccccEEEE--CCEEEEEC-CCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEE
Confidence            468899999888776655443 2222333333  45555555 443     468899988754322  222111222334


Q ss_pred             EecCCEEEEeecCC-----eEEEEECcCC
Q psy14511        291 CWNGNLLSCGTIGG-----NILHYDVRTH  314 (488)
Q Consensus       291 ~~~~~~l~~~~~dg-----~i~i~d~~~~  314 (488)
                      ..++++++.|+.++     .+.+||+.+.
T Consensus       249 ~~~~~i~v~GG~~~~~~~~~v~~yd~~~~  277 (302)
T 2xn4_A          249 AVNGLLYVVGGDDGSCNLASVEYYNPTTD  277 (302)
T ss_dssp             EETTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred             EECCEEEEECCcCCCcccccEEEEcCCCC
Confidence            45788888887654     4788888764

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=96.88  E-value=0.14  Score=45.55  Aligned_cols=143  Identities=10%  Similarity=0.041  Sum_probs=92.8

Q ss_pred             CCcEEEEECCCeEEEEECCCCceEEEEecCC-CCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcce-----------
Q psy14511        208 YHDTLAVALDTSVYTWNTKTNKTQLLVEYPT-YDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEER-----------  275 (488)
Q Consensus       208 ~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~-----------  275 (488)
                      ++.-+....++.||.-++.....-+.+..+. ..-..+..+..+|+|++|+..  .+..|.+..+..+.           
T Consensus        31 n~t~i~~a~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~--g~~~V~Vv~LP~~~~~~~~~~~~~~  108 (452)
T 3pbp_A           31 NGTRIVFIQDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLF--NDNEIFVMEVPWGYSNVEDVSIQDA  108 (452)
T ss_dssp             TTTEEEEEETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEE--CSSEEEEEECCTTCSCCCCHHHHHT
T ss_pred             CCCEEEEEECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEe--cCCeEEEEEecCccccCcccccccc
Confidence            3445555566888888877544444444431 012357789999999999998  45678888876321           


Q ss_pred             -eeeeecc------ccccEEEEEe-----cCCEEEEeecCCeEEEEECcCCCccceeee---------cCCccEEEEEEc
Q psy14511        276 -LIQKLRT------HMHQVIAMCW-----NGNLLSCGTIGGNILHYDVRTHSDYPTAIT---------REGDVVCGLKWS  334 (488)
Q Consensus       276 -~~~~~~~------~~~~v~~~~~-----~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---------~~~~~i~~~~~s  334 (488)
                       ..+.+.-      ...+|..+.|     ++..|++-..|+.|++||+.........+.         .....|.+++|.
T Consensus       109 ~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg  188 (452)
T 3pbp_A          109 FQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFS  188 (452)
T ss_dssp             TEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEEC
T ss_pred             cceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEc
Confidence             1112221      2467999999     478999999999999999986322111222         122568899999


Q ss_pred             cCCcEEEEEe--c-CeEEEEE
Q psy14511        335 PNGRYLASGS--N-NTVKIWD  352 (488)
Q Consensus       335 ~~~~~l~~~~--d-~~i~iwd  352 (488)
                      +++-.|...+  + |.|+-.-
T Consensus       189 ~~~lTLYvl~~t~~GDIYAlc  209 (452)
T 3pbp_A          189 KDGLTLYCLNTTEGGDIFAFY  209 (452)
T ss_dssp             TTSSCEEEEECTTSCEEEEES
T ss_pred             CCCcEEEEEecCCCCCEEEEC
Confidence            9886666544  4 7765443

>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A

Probab=96.84  E-value=0.25  Score=51.21  Aligned_cols=88  Identities=14%  Similarity=0.193  Sum_probs=52.6

Q ss_pred             CCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCcccccccccceeEEEEecCCC
Q psy14511         14 GGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEP   93 (488)
Q Consensus        14 dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~   93 (488)
                      ..+|.|.|+..+..+.+.--.-    -+.-.+|..+.||--...++.|+|+++..   .+.... ...+|.-=.|-.+. 
T Consensus        47 ~~~vvIidl~~~~~~~rrpi~A----dsAIMnP~~~iiALrag~~lQiFnl~~k~---klks~~-~~e~VvfWkWis~~-  117 (1630)
T 1xi4_A           47 QAQVVIIDMNDPSNPIRRPISA----DSAIMNPASKVIALKAGKTLQIFNIEMKS---KMKAHT-MTDDVTFWKWISLN-  117 (1630)
T ss_pred             CceEEEEECCCCCCcccccccc----hhhccCCCcceEEEecCCeEEEeehHHhh---hhcccc-cCCCceEEEecCCC-
Confidence            3478888888766442211111    12346787888877778899999998733   222221 23466666776554 


Q ss_pred             eEEeeeCCcccceEEEEecCC
Q psy14511         94 TLLATGGGICDQTVRLWNSMN  114 (488)
Q Consensus        94 ~l~~~~~~~~d~~i~vwd~~~  114 (488)
                      .|..++    +..|.-|++..
T Consensus       118 ~l~lVT----~~aVyHW~~~~  134 (1630)
T 1xi4_A          118 TVALVT----DNAVYHWSMEG  134 (1630)
T ss_pred             eeEEEc----CCeEEEeccCC
Confidence            333333    66899998854

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=96.76  E-value=0.27  Score=43.56  Aligned_cols=226  Identities=12%  Similarity=0.085  Sum_probs=109.9

Q ss_pred             CCcEEEEE--CCCeEEEEECCC--CceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCC----------CCcEEEEECCc
Q psy14511        208 YHDTLAVA--LDTSVYTWNTKT--NKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTC----------TEYIDLWHEQE  273 (488)
Q Consensus       208 ~~~~~~~~--~d~~v~iw~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~----------~~~i~i~d~~~  273 (488)
                      ++.+++.+  ....+..||..+  .+......++........++.+  +++.++.+ +.          -..+.+||..+
T Consensus        19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~G-G~~~~~~~~~~~~~~v~~yd~~~   95 (357)
T 2uvk_A           19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFG-GIGKNSEGLTQVFNDVHKYNPKT   95 (357)
T ss_dssp             TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEEC-CEEECTTSCEEECCCEEEEETTT
T ss_pred             CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEc-CCCCCCCccceeeccEEEEeCCC
Confidence            34554444  456799999874  5555444443112222333333  45555555 44          24688899887


Q ss_pred             ceeee--eec-cccccEEEEEecCCEEEEeecC---------------------------------------CeEEEEEC
Q psy14511        274 ERLIQ--KLR-THMHQVIAMCWNGNLLSCGTIG---------------------------------------GNILHYDV  311 (488)
Q Consensus       274 ~~~~~--~~~-~~~~~v~~~~~~~~~l~~~~~d---------------------------------------g~i~i~d~  311 (488)
                      .+-..  .+. .......++..++++++.|+.+                                       ..+.+||.
T Consensus        96 ~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~  175 (357)
T 2uvk_A           96 NSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDP  175 (357)
T ss_dssp             TEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEET
T ss_pred             CcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeC
Confidence            54322  222 1112233344688888888754                                       57889998


Q ss_pred             cCCC-ccceeeecCCccEEEEEEccCCcEEEEEe-c------CeEEEEEC--CCCC--CCcccc----ee-eeeecCCCC
Q psy14511        312 RTHS-DYPTAITREGDVVCGLKWSPNGRYLASGS-N------NTVKIWDF--RQLD--AKRPLG----LI-VPKLKREGR  374 (488)
Q Consensus       312 ~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d------~~i~iwd~--~~~~--~~~~~~----~~-~~~~~~~~~  374 (488)
                      .+.. .....+......-.+++. -++++++.|+ +      ..+.+||+  .+..  ....+.    .. ..+...+++
T Consensus       176 ~~~~W~~~~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~  254 (357)
T 2uvk_A          176 STQQWSYAGESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDS  254 (357)
T ss_dssp             TTTEEEEEEECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEETTE
T ss_pred             CCCcEEECCCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEEECCE
Confidence            7643 111111111111012222 2666777665 2      35777876  3221  111111    11 113344555


Q ss_pred             EEEEEccCCC----------------------CeEEEEeCCCcc--eeEEEeeccccEEEEEEcCCCCEEEEEeCCC---
Q psy14511        375 ELVTSHGKQD----------------------CSLKMWEYPRLH--LIEELKIHQERILSAVLSPDQTCVAAASADE---  427 (488)
Q Consensus       375 ~l~~~~g~~~----------------------~~i~i~d~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg---  427 (488)
                      .++.  |+.+                      ..+.+||+.+.+  .+..+......-.+  ...+++.++.|+.++   
T Consensus       255 iyv~--GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~--~~~~~~i~v~GG~~~~~~  330 (357)
T 2uvk_A          255 LIFA--GGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVS--LPWNNSLLIIGGETAGGK  330 (357)
T ss_dssp             EEEE--CCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEE--EEETTEEEEEEEECGGGC
T ss_pred             EEEE--cCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCccccee--EEeCCEEEEEeeeCCCCC
Confidence            5555  4321                      257889987654  33333222221122  234788888888653   


Q ss_pred             ---cEEEEecCCCCccc
Q psy14511        428 ---TISIWNCFPRDKKR  441 (488)
Q Consensus       428 ---~v~iw~~~~~~~~~  441 (488)
                         .|.+.++++++...
T Consensus       331 ~~~~v~~l~~~~~~~~~  347 (357)
T 2uvk_A          331 AVTDSVLITVKDNKVTV  347 (357)
T ss_dssp             EEEEEEEEEC-CCSCEE
T ss_pred             EeeeEEEEEEcCcEeEe
Confidence               35566887777653

>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}

Probab=96.71  E-value=0.25  Score=42.49  Aligned_cols=123  Identities=7%  Similarity=0.086  Sum_probs=70.5

Q ss_pred             CCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEecCCE
Q psy14511        217 DTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNL  296 (488)
Q Consensus       217 d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~  296 (488)
                      ...|+..++.......+..    +.  +  .+++|+++.|+.+......|...++..+.....+.+. .. ..+.++++.
T Consensus       128 ~~~Iy~~~~dGs~~~~lt~----~~--~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~~-~~-~~~~P~g~~  197 (302)
T 3s25_A          128 ATSLYRIRIDGEEKKKIKN----HY--L--FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDCN-CY-KPVVLDDTN  197 (302)
T ss_dssp             CEEEEEEETTSCCCEEEES----SC--C--CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECSC-EE-EEEEEETTE
T ss_pred             CceEEEEECCCCCeEEEeC----CC--c--eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCCC-cc-ceeeecCCE
Confidence            4566666776544443332    21  1  4567889999988333677888888765544333321 11 223347777


Q ss_pred             EEEeecC--CeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEec---CeEEEEECCC
Q psy14511        297 LSCGTIG--GNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN---NTVKIWDFRQ  355 (488)
Q Consensus       297 l~~~~~d--g~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d---~~i~iwd~~~  355 (488)
                      |+-...+  ..|..-++...  ....+...  .+  ..|+|++++|..+.+   +.|..-++..
T Consensus       198 iy~t~~~~~~~I~~~~ldG~--~~~~Lt~~--~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG  255 (302)
T 3s25_A          198 VYYMDVNRDNAIVHVNINNP--NPVVLTEA--NI--EHYNVYGSLIFYQRGGDNPALCVVKNDG  255 (302)
T ss_dssp             EEEEEGGGTTEEEEECSSSC--CCEECSCS--CE--EEEEEETTEEEEEECSSSCEEEEEETTS
T ss_pred             EEEEEcCCCcEEEEEECCCC--CeEEEeCC--Cc--ceEEECCCEEEEEECCCCcEEEEEECCC
Confidence            7766544  35666666543  23334322  23  348889999887653   5666666654

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=96.68  E-value=0.28  Score=42.63  Aligned_cols=94  Identities=11%  Similarity=0.203  Sum_probs=52.0

Q ss_pred             CeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCC----CcEEEEECCcceeee--eeccccccEEEEE
Q psy14511        218 TSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCT----EYIDLWHEQEERLIQ--KLRTHMHQVIAMC  291 (488)
Q Consensus       218 ~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~----~~i~i~d~~~~~~~~--~~~~~~~~v~~~~  291 (488)
                      ..+.+||..+.+.......+. ......++.+  +++.++.+|..+    ..+.+||+.+.+-..  .+.........+.
T Consensus       175 ~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~  251 (318)
T 2woz_A          175 NRVFIYNPKKGDWKDLAPMKT-PRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVS  251 (318)
T ss_dssp             CCEEEEETTTTEEEEECCCSS-CCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEE
T ss_pred             ceEEEEcCCCCEEEECCCCCC-CcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEE
Confidence            468999999988766654443 2222233333  455666663222    357788887653222  2222222223444


Q ss_pred             ecCCEEEEeecC--------------CeEEEEECcCC
Q psy14511        292 WNGNLLSCGTIG--------------GNILHYDVRTH  314 (488)
Q Consensus       292 ~~~~~l~~~~~d--------------g~i~i~d~~~~  314 (488)
                      .++++++.|+.+              ..+.+||+.+.
T Consensus       252 ~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~  288 (318)
T 2woz_A          252 LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKK  288 (318)
T ss_dssp             ETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTT
T ss_pred             ECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCC
Confidence            578888887754              34667776653

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=96.68  E-value=0.28  Score=42.62  Aligned_cols=213  Identities=12%  Similarity=0.066  Sum_probs=105.6

Q ss_pred             CeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCC----CC-------cEEEEECCcceeeee--ecccc
Q psy14511        218 TSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTC----TE-------YIDLWHEQEERLIQK--LRTHM  284 (488)
Q Consensus       218 ~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~----~~-------~i~i~d~~~~~~~~~--~~~~~  284 (488)
                      ..+..||..+++... ...+. ........+...++..++.| +.    ++       .+..||..+.+-...  +....
T Consensus        24 ~~~~~yd~~~~~W~~-~~~~~-~~~r~~~~~~~~~~~lyv~G-G~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r  100 (318)
T 2woz_A           24 TAAVAYDPMENECYL-TALAE-QIPRNHSSIVTQQNQVYVVG-GLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSAR  100 (318)
T ss_dssp             SEEEEEETTTTEEEE-EEECT-TSCSSEEEEECSSSCEEEEE-SSCC-------CCCBEEEEEETTTTEEEECSCBSSCB
T ss_pred             cceEEECCCCCceec-ccCCc-cCCccceEEEEECCEEEEEC-CcccCccccCCCccccEEEEeCCCCcEEECCCCCccc
Confidence            358999999988655 33322 11222233334566777777 42    11       277888876543221  22111


Q ss_pred             ccEEEEEecCCEEEEeecC-------CeEEEEECcCCCccceeeecCCcc-E-EEEEEccCCcEEEEEe-c------CeE
Q psy14511        285 HQVIAMCWNGNLLSCGTIG-------GNILHYDVRTHSDYPTAITREGDV-V-CGLKWSPNGRYLASGS-N------NTV  348 (488)
Q Consensus       285 ~~v~~~~~~~~~l~~~~~d-------g~i~i~d~~~~~~~~~~~~~~~~~-i-~~~~~s~~~~~l~~~~-d------~~i  348 (488)
                      ........++++++.|+.+       ..+.+||..+..  -..+.....+ . .+++. .++++++.|+ +      ..+
T Consensus       101 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~  177 (318)
T 2woz_A          101 CLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAK--WSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRV  177 (318)
T ss_dssp             CSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTE--EEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCE
T ss_pred             cccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCC--EeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceE
Confidence            2223344478888888764       357888887643  1111111110 0 11222 4677777765 1      358


Q ss_pred             EEEECCCCCCCc--ccce--e-eeeecCCCCEEEEEccCCC----CeEEEEeCCCcceeE--EEeeccccEEEEEEcCCC
Q psy14511        349 KIWDFRQLDAKR--PLGL--I-VPKLKREGRELVTSHGKQD----CSLKMWEYPRLHLIE--ELKIHQERILSAVLSPDQ  417 (488)
Q Consensus       349 ~iwd~~~~~~~~--~~~~--~-~~~~~~~~~~l~~~~g~~~----~~i~i~d~~~~~~~~--~~~~~~~~v~~~~~s~~~  417 (488)
                      .+||+.+.+-..  .+..  . ..+..-+++.++.. |..+    ..+.+||+.+.+-..  .+.........+.  .++
T Consensus       178 ~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~G-G~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~  254 (318)
T 2woz_A          178 FIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAG-GVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVS--LAG  254 (318)
T ss_dssp             EEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEE-EEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEE--ETT
T ss_pred             EEEcCCCCEEEECCCCCCCcccceEEEECCEEEEEc-CcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEE--ECC
Confidence            999988653111  1110  0 11233355555552 3222    357789987754322  1211111112222  366


Q ss_pred             CEEEEEeCC--------------CcEEEEecCCCCc
Q psy14511        418 TCVAAASAD--------------ETISIWNCFPRDK  439 (488)
Q Consensus       418 ~~l~t~~~d--------------g~v~iw~~~~~~~  439 (488)
                      ++++.|+.+              ..+.+||+.+.+-
T Consensus       255 ~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W  290 (318)
T 2woz_A          255 SLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEW  290 (318)
T ss_dssp             EEEEECCBCCBC----CCBCCBCCCEEEEETTTTEE
T ss_pred             EEEEECCeeccCCCCceeccceeeeEEEEeCCCCEe
Confidence            777777654              3467777766543

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=96.63  E-value=0.31  Score=42.60  Aligned_cols=77  Identities=17%  Similarity=0.066  Sum_probs=46.9

Q ss_pred             ceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcc----cccccccceeEEEEecC---CCeEEeeeCCcccceEE
Q psy14511         37 DVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQV----NNQCHLSAVKAIAWCPW---EPTLLATGGGICDQTVR  108 (488)
Q Consensus        37 ~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~----~~~~h~~~v~~l~~~~~---~~~l~~~~~~~~d~~i~  108 (488)
                      ..-..|+|.|||+++++-. .|.|++++..+++.. .+.    ...........|+|+|+   +..|+++-+...++.|.
T Consensus        32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~-~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~  110 (347)
T 3das_A           32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKT-ELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV  110 (347)
T ss_dssp             SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEE-EEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred             CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEe-eecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence            3468999999999998887 899999986543321 111    11223457889999995   33454431100145555


Q ss_pred             EEecCC
Q psy14511        109 LWNSMN  114 (488)
Q Consensus       109 vwd~~~  114 (488)
                      -|.+..
T Consensus       111 R~~~~~  116 (347)
T 3das_A          111 RMLYDE  116 (347)
T ss_dssp             EEEBCT
T ss_pred             EEEeCC
Confidence            555543

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=96.41  E-value=0.46  Score=42.00  Aligned_cols=51  Identities=16%  Similarity=0.203  Sum_probs=27.9

Q ss_pred             cEEEEECCcce--eeeeeccccccEEEEEecCCEEEEeecCC------eEEEEECcCCC
Q psy14511        265 YIDLWHEQEER--LIQKLRTHMHQVIAMCWNGNLLSCGTIGG------NILHYDVRTHS  315 (488)
Q Consensus       265 ~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~~~~l~~~~~dg------~i~i~d~~~~~  315 (488)
                      .+.+||+.+.+  .+..+......-.++..++++++.|+.++      .+.++++++++
T Consensus       286 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~  344 (357)
T 2uvk_A          286 STDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNK  344 (357)
T ss_dssp             CCEEEECC---CEEEEECSSCCBSSEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCS
T ss_pred             eEEEEecCCCceeeCCCCCCCcccceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcE
Confidence            57788887643  23233222222234556888888888653      35566777654

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=96.27  E-value=0.22  Score=43.30  Aligned_cols=184  Identities=7%  Similarity=-0.051  Sum_probs=97.9

Q ss_pred             CcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEE--cCCCCeEEEEe-CCCCcEEEEECCcceeeeeecc---
Q psy14511        209 HDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAW--KPRTTDLAVTN-TCTEYIDLWHEQEERLIQKLRT---  282 (488)
Q Consensus       209 ~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~~~~-~~~~~i~i~d~~~~~~~~~~~~---  282 (488)
                      +.+++++.||.|.-+|..+|+..-.++..  ...++....-  .+.+..+++.. +.||.|..++..++.....+..   
T Consensus        11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~--~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~l   88 (339)
T 2be1_A           11 DILIAADVEGGLHAVDRRNGHIIWSIEPE--NFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQL   88 (339)
T ss_dssp             EEEEEEETTSCEEEEETTTTEEEEEECGG--GSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHH
T ss_pred             CEEEEEeCCCeEEEEECCCCcEEEEecCC--ccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccc
Confidence            56888899999999999999887766543  1112211110  01122444442 4799999999888755443321   


Q ss_pred             -ccccEEE---EEe-------cCCEEEEeecCCeEEEEECcCCCccceeeecCC-cc-----EEEEEEc-----cCCcEE
Q psy14511        283 -HMHQVIA---MCW-------NGNLLSCGTIGGNILHYDVRTHSDYPTAITREG-DV-----VCGLKWS-----PNGRYL  340 (488)
Q Consensus       283 -~~~~v~~---~~~-------~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~~-----i~~~~~s-----~~~~~l  340 (488)
                       ...++..   ...       .+..+++|+.+|.+...|+++++.....-.+.. ..     ..+....     ..+..+
T Consensus        89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v  168 (339)
T 2be1_A           89 VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMI  168 (339)
T ss_dssp             HTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEE
T ss_pred             eeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeE
Confidence             1122221   001       467889999999999999998763322211110 10     0011110     113445


Q ss_pred             EEEe-cCeEEEEECCCCCCCcccc--eee-----------eeecCCCCEEEEEccCCCCeEEEEeCCCcceeE
Q psy14511        341 ASGS-NNTVKIWDFRQLDAKRPLG--LIV-----------PKLKREGRELVTSHGKQDCSLKMWEYPRLHLIE  399 (488)
Q Consensus       341 ~~~~-d~~i~iwd~~~~~~~~~~~--~~~-----------~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~  399 (488)
                      ..+. +..+.+.+ ++++ .-...  ...           ...+.|+..++   +..||.|.-+|..+|+.+.
T Consensus       169 ~ig~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~~~---~~~dg~v~A~d~~~G~~~W  236 (339)
T 2be1_A          169 VIGKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMCIA---PFRDKSLLASDLDFRIARW  236 (339)
T ss_dssp             EEEEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCCEE---EETTTEEEEECSTTCCEEE
T ss_pred             EEecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcEEE---ECCCCEEEEEECCCCcEEE
Confidence            5555 46666655 3332 11110  000           01223466644   3678888888888887664

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*

Probab=96.13  E-value=1  Score=44.04  Aligned_cols=178  Identities=14%  Similarity=0.125  Sum_probs=94.8

Q ss_pred             CeEEEEECCCCceEEEE-e-----cCCCCCCceEEEEEcCCCCeEEEEeCCC-----CcEEEEECCcceee--eeecccc
Q psy14511        218 TSVYTWNTKTNKTQLLV-E-----YPTYDNAYISCVAWKPRTTDLAVTNTCT-----EYIDLWHEQEERLI--QKLRTHM  284 (488)
Q Consensus       218 ~~v~iw~~~~~~~~~~~-~-----~~~~~~~~i~~~~~~~~~~~l~~~~~~~-----~~i~i~d~~~~~~~--~~~~~~~  284 (488)
                      ..+.+||..+++..... .     .+. ....-..+.+..+++.++.||...     ..+.+||..+.+-.  ..+....
T Consensus       412 ~~v~~yd~~~~~W~~~~~~~p~~~~p~-~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R  490 (695)
T 2zwa_A          412 NEILQLSIHYDKIDMKNIEVSSSEVPV-ARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTR  490 (695)
T ss_dssp             CCEEEEEECSSCEEEEECCCCCSCCCC-CCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCC
T ss_pred             CcEEEEECCCCeEEEeccCCCCCCCCc-cccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCc
Confidence            46889999988876655 3     221 222233333332666666663221     35788998874322  2222222


Q ss_pred             ccEEEEEe-cCCEEEEeecCC--eEEEEECcCCCc-ccee---eecCCccEEEEEEccC-CcEEEEEec--------CeE
Q psy14511        285 HQVIAMCW-NGNLLSCGTIGG--NILHYDVRTHSD-YPTA---ITREGDVVCGLKWSPN-GRYLASGSN--------NTV  348 (488)
Q Consensus       285 ~~v~~~~~-~~~~l~~~~~dg--~i~i~d~~~~~~-~~~~---~~~~~~~i~~~~~s~~-~~~l~~~~d--------~~i  348 (488)
                      ..-.+..+ ++++++.|+.++  .+.+||..+..= ....   ..........+.+..+ +++++.|+.        +.+
T Consensus       491 ~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v  570 (695)
T 2zwa_A          491 FRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKA  570 (695)
T ss_dssp             BSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEE
T ss_pred             ccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcE
Confidence            22344444 788888888765  689999877430 0000   1111111223555555 667777652        358


Q ss_pred             EEEECCCCCC-----Cccc------cee-eeeecCC-CCEEEEEccCC--------CCeEEEEeCCCccee
Q psy14511        349 KIWDFRQLDA-----KRPL------GLI-VPKLKRE-GRELVTSHGKQ--------DCSLKMWEYPRLHLI  398 (488)
Q Consensus       349 ~iwd~~~~~~-----~~~~------~~~-~~~~~~~-~~~l~~~~g~~--------~~~i~i~d~~~~~~~  398 (488)
                      .+||+.+..-     -..+      ... ..+..-+ ++.++.  |+.        ...+.+||+.+.+-.
T Consensus       571 ~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~--GG~~~~~~~~~~~~v~~yd~~t~~W~  639 (695)
T 2zwa_A          571 IIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIV--GGTSPSGLFDRTNSIISLDPLSETLT  639 (695)
T ss_dssp             EEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEE--CCBCSSCCCCTTTSEEEEETTTTEEE
T ss_pred             EEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEE--CCccCCCCCCCCCeEEEEECCCCeEE
Confidence            8999887651     0011      111 1122233 555555  432        356999999876543

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=95.89  E-value=0.85  Score=40.25  Aligned_cols=61  Identities=10%  Similarity=0.156  Sum_probs=38.6

Q ss_pred             eEEEEEEccCCc-EEEEecCCeEEEEeccccCcCCCcccc----cccccceeEEEEecC---CCeEEeee
Q psy14511         38 VVCGLKWSPNGR-YLASGSNNTVKIWDFRQLDAKRPQVNN----QCHLSAVKAIAWCPW---EPTLLATG   99 (488)
Q Consensus        38 ~V~~l~~sp~g~-~las~~d~~i~vwd~~~~~~~~~~~~~----~~h~~~v~~l~~~~~---~~~l~~~~   99 (488)
                      .-..|+|.|+|+ ++++-..+.|++++... .....+..+    .........|+|+|+   +.+|+++.
T Consensus        19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g-~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~   87 (353)
T 2g8s_A           19 HPWALAFLPDNHGMLITLRGGELRHWQAGK-GLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSY   87 (353)
T ss_dssp             SEEEEEECSTTCCEEEEETTTEEEEEETTT-EECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEE
T ss_pred             CcEEEEEcCCCCEEEEEeCCceEEEEeCCC-ceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEE
Confidence            357899999999 66665589999998542 211112111    112346789999996   45565554

>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A

Probab=95.73  E-value=1.3  Score=41.11  Aligned_cols=94  Identities=18%  Similarity=0.256  Sum_probs=62.3

Q ss_pred             EEEEEEccCCcEEEEEe--cCeEEEEECCCCCC-----------------CcccceeeeeecCCCCEEEEEccCCCCeEE
Q psy14511        328 VCGLKWSPNGRYLASGS--NNTVKIWDFRQLDA-----------------KRPLGLIVPKLKREGRELVTSHGKQDCSLK  388 (488)
Q Consensus       328 i~~~~~s~~~~~l~~~~--d~~i~iwd~~~~~~-----------------~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~  388 (488)
                      ...+.++|||+++++++  +.++.++|+++...                 ..-+..+..+|.++| ..+++ -.-|.+|.
T Consensus       325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G-~aYTt-lfidSqvv  402 (638)
T 3sbq_A          325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRG-NAYTT-LFIDSQVV  402 (638)
T ss_dssp             CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSS-EEEEE-ETTTTEEE
T ss_pred             CcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCC-ceEee-eeecceEE
Confidence            45688999999999998  49999999985211                 011122234999999 33332 57899999


Q ss_pred             EEeCCCc----------ceeEEEeeccccEEEEEE------cCCCCEEEEEe
Q psy14511        389 MWEYPRL----------HLIEELKIHQERILSAVL------SPDQTCVAAAS  424 (488)
Q Consensus       389 i~d~~~~----------~~~~~~~~~~~~v~~~~~------s~~~~~l~t~~  424 (488)
                      .|++...          ..+..+.-|-.+ -.+.-      .|||++|++..
T Consensus       403 kWni~~a~~~~~g~~~~~v~~k~dv~Yqp-GH~~~~~get~~~dGk~lv~ln  453 (638)
T 3sbq_A          403 KWNMEEAVRAYKGEKVNYIKQKLDVHYQP-GHLHASLCETNEADGKWLVALS  453 (638)
T ss_dssp             EEEHHHHHHHHTTCCCCCEEEEEECSSCE-EEEEETTTTSTTCCSCEEEEEE
T ss_pred             EEeccHHHHHhcCccCCeeeeccccccCC-cccccCCCccCCCCccEEEEec
Confidence            9999653          455566555432 22322      46888888864

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=95.53  E-value=1.1  Score=39.22  Aligned_cols=107  Identities=8%  Similarity=0.122  Sum_probs=60.7

Q ss_pred             CCceEEEEEcCCCCeEEEEeC-----------------CCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEe-
Q psy14511        241 NAYISCVAWKPRTTDLAVTNT-----------------CTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCG-  300 (488)
Q Consensus       241 ~~~i~~~~~~~~~~~l~~~~~-----------------~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~-  300 (488)
                      -...+.+.+.++|+..++. .                 ..|.|..+|..  + +..+...-...+.++|  |++.++.+ 
T Consensus       164 ~~~pND~~v~~~G~fyvt~-~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~-~~~~~~~l~~pNGia~spDg~~lYvad  239 (355)
T 3sre_A          164 LPSVNDIVAVGPEHFYATN-DHYFIDPYLKSWEMHLGLAWSFVTYYSPN--D-VRVVAEGFDFANGINISPDGKYVYIAE  239 (355)
T ss_dssp             CSSEEEEEEEETTEEEEEE-SCSCSSHHHHHHHHHTTCCCEEEEEECTT--C-CEEEEEEESSEEEEEECTTSSEEEEEE
T ss_pred             CCCCceEEEeCCCCEEecC-CcEeCCcccccchhhccCCccEEEEEECC--e-EEEeecCCcccCcceECCCCCEEEEEe
Confidence            3456777788877655544 2                 12445555442  2 2222222234466777  67666655 


Q ss_pred             ecCCeEEEEECcCCCcc--ceeeecCCccEEEEEEcc-CCcEEEEEe-c-CeEEEEE
Q psy14511        301 TIGGNILHYDVRTHSDY--PTAITREGDVVCGLKWSP-NGRYLASGS-N-NTVKIWD  352 (488)
Q Consensus       301 ~~dg~i~i~d~~~~~~~--~~~~~~~~~~i~~~~~s~-~~~~l~~~~-d-~~i~iwd  352 (488)
                      +..+.|+.|++......  ...+ ......-.+++.+ +|++.+++. + +.|..|+
T Consensus       240 t~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~  295 (355)
T 3sre_A          240 LLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPNGMRIFFYD  295 (355)
T ss_dssp             GGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESCHHHHHSCC
T ss_pred             CCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCCceEEEEEC
Confidence            45789999998743221  1223 2245567889998 598877665 4 4444444

>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A

Probab=95.06  E-value=3  Score=41.31  Aligned_cols=209  Identities=13%  Similarity=0.097  Sum_probs=115.7

Q ss_pred             cEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeec-------c
Q psy14511        210 DTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLR-------T  282 (488)
Q Consensus       210 ~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~-------~  282 (488)
                      .+.+++. +-+..++..+++......+   ....|.++...++|...+.+  . +-+.+++..+.+......       -
T Consensus       204 ~lWigt~-~Gl~~~~~~~~~~~~~~~l---~~~~i~~i~~d~~g~lWigT--~-~Gl~~~~~~~~~~~~~~~~~~~~~~l  276 (758)
T 3ott_A          204 CVWIGTE-GYLFQYFPSTGQIKQTEAF---HNNSIKSLALDGNGDLLAGT--D-NGLYVYHNDTTPLQHIIHDSRNIQSL  276 (758)
T ss_dssp             EEEEEEE-EEEEEEETTTTEEEEEEEE---EEEEEEEEEECTTCCEEEEE--T-TEEEEECCTTSCCEEECCCTTCTTSC
T ss_pred             EEEEEEC-CCCeEEcCCCCeEEeccCC---CCCeEEEEEEcCCCCEEEEe--C-CceeEEecCCCcEEEEEcCCCCcCcC
Confidence            3666664 5688899887765443332   33468888888887655544  3 457888876643322111       1


Q ss_pred             ccccEEEEEec-CCEEEEeecCCeEEEEECcCCCccceeee-------cCCccEEEEEEccCCcEEEEEecCeEEEEECC
Q psy14511        283 HMHQVIAMCWN-GNLLSCGTIGGNILHYDVRTHSDYPTAIT-------REGDVVCGLKWSPNGRYLASGSNNTVKIWDFR  354 (488)
Q Consensus       283 ~~~~v~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-------~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~  354 (488)
                      ....|.++..| ...|..|+..| +.++....   ......       .....|.++.-.++|.+.+.. .+-+..++..
T Consensus       277 ~~~~i~~i~~D~~g~lWiGT~~G-l~~~~~~~---~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiGt-~~Gl~~~~~~  351 (758)
T 3ott_A          277 TNNIIWNIFADQEHNIWLGTDYG-ISLSRYNS---ALQFIPISQITGTGDGNQFYSLFRDSKGFYWFGG-ANGLIRFTDP  351 (758)
T ss_dssp             SCSCEEEEEECTTCCEEEEESSS-EEEECCCC----CEEEEHHHHSCSCCCCBEEEEEECTTCCEEEEE-TTEEEEESCT
T ss_pred             CcCeEEEEEEcCCCCEEEEeCCc-ccccccCC---ceeEEecccCCCCCCCceEEEEEEcCCCCEEEee-CCcceeeccc
Confidence            23458888774 34566666666 54443321   111111       123458888888888776654 4446666654


Q ss_pred             CCCCCc-----------ccc-eeeeee--cCCCCEEEEEccCCCCeEEEEeCCCcceeEEEe-e-----ccccEEEEEEc
Q psy14511        355 QLDAKR-----------PLG-LIVPKL--KREGRELVTSHGKQDCSLKMWEYPRLHLIEELK-I-----HQERILSAVLS  414 (488)
Q Consensus       355 ~~~~~~-----------~~~-~~~~~~--~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~-~-----~~~~v~~~~~s  414 (488)
                      +.....           .+. ..+.++  ..+|+..+.   . ++-+..+|..+++...-.. .     ....|.++.-.
T Consensus       352 ~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWig---t-~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d  427 (758)
T 3ott_A          352 AGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQLWIA---T-DGSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFED  427 (758)
T ss_dssp             TSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSCEEEE---E-TTEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEEC
T ss_pred             ccccceeEEeccCCcCCCCCCCceEEEEECCCCCEEEE---e-CCcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEc
Confidence            321100           010 112222  344554443   3 4579999988765432211 1     12458888877


Q ss_pred             CCCCEEEEEeCCCcEEEEecC
Q psy14511        415 PDQTCVAAASADETISIWNCF  435 (488)
Q Consensus       415 ~~~~~l~t~~~dg~v~iw~~~  435 (488)
                      +++++.+ |+..+-|..+|..
T Consensus       428 ~~g~lWi-gT~~~Gl~~~~~~  447 (758)
T 3ott_A          428 TAGQLWI-STCLGGIFVVDKH  447 (758)
T ss_dssp             TTSEEEE-EESSSCEEEEEHH
T ss_pred             CCCCEEE-EECCCceEEEccc
Confidence            7776544 6655567888754

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=94.66  E-value=0.34  Score=38.83  Aligned_cols=102  Identities=10%  Similarity=-0.023  Sum_probs=59.2

Q ss_pred             ceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecccccc--------EEEEEec--CCEEEEeecCCeEEEEECc
Q psy14511        243 YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQ--------VIAMCWN--GNLLSCGTIGGNILHYDVR  312 (488)
Q Consensus       243 ~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~--------v~~~~~~--~~~l~~~~~dg~i~i~d~~  312 (488)
                      .+..++|+|+|...++   .+|.+.-.+..+.... .+.+....        ..++.+|  |.+.++  .||.|+-++-.
T Consensus        42 ~~~~laf~P~G~LYaV---~~G~Ly~~~~~t~~~~-~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP  115 (236)
T 1tl2_A           42 NFKFLFLSPGGELYGV---LNDKIYKGTPPTHDND-NWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPP  115 (236)
T ss_dssp             TCSEEEECTTSCEEEE---ETTEEEEESCCCSTTC-CHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCC
T ss_pred             cceeEEECCCccEEEE---eCCeEEEECCCCCCcc-cccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCC
Confidence            5779999998875554   4666666555431111 11111122        2566664  555555  67999888764


Q ss_pred             CCCcc------ceeeecCCccEEEEEEccCCcEEEEEecCeEEEE
Q psy14511        313 THSDY------PTAITREGDVVCGLKWSPNGRYLASGSNNTVKIW  351 (488)
Q Consensus       313 ~~~~~------~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iw  351 (488)
                      +....      ...-..--..+..+.|.|+|.+.+.. ++.+.-.
T Consensus       116 ~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~lyr~  159 (236)
T 1tl2_A          116 QSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQFYKA  159 (236)
T ss_dssp             CSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEEEEE
T ss_pred             cCCCCceeccccEeccCCCCceEEEEECCCceEEEEe-CCcEEec
Confidence            32211      11111122457899999999999888 8775443

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=94.46  E-value=1.5  Score=35.12  Aligned_cols=131  Identities=11%  Similarity=-0.059  Sum_probs=76.2

Q ss_pred             cEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccc--ee----------eeeecCCCCEEEEEccCCCCeEEEEeCCC
Q psy14511        327 VVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLG--LI----------VPKLKREGRELVTSHGKQDCSLKMWEYPR  394 (488)
Q Consensus       327 ~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~--~~----------~~~~~~~~~~l~~~~g~~~~~i~i~d~~~  394 (488)
                      .+..++|+|+|.+.++ .+|.+.-.+..+.....-+.  ..          ...|.|+|.+.++    .||.|+-++..+
T Consensus        42 ~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav----~dG~iyr~~pP~  116 (236)
T 1tl2_A           42 NFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV----SKDKLYKASPPQ  116 (236)
T ss_dssp             TCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE----ETTEEEEESCCC
T ss_pred             cceeEEECCCccEEEE-eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe----CCCEEEEeCCCc
Confidence            5779999999997777 77887777765432221111  11          2277888888877    258898888654


Q ss_pred             ccee------EEE-eeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcccc------cc--ccCCcceEEeecCCC
Q psy14511        395 LHLI------EEL-KIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRK------AR--QVGSGSSLEFAILKQ  459 (488)
Q Consensus       395 ~~~~------~~~-~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~------~~--~~~~v~~~~~s~~~~  459 (488)
                      ...-      ..+ ..-=..+..|.|.|+|.+.+..  |+.++-+..........      ..  .-..-..+.|++++.
T Consensus       117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~  194 (236)
T 1tl2_A          117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGT  194 (236)
T ss_dssp             STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSC
T ss_pred             CCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCc
Confidence            2111      111 1111468999999999988777  77754333322221111      11  111223466888777


Q ss_pred             ceEEE
Q psy14511        460 PVSLT  464 (488)
Q Consensus       460 ~~~~~  464 (488)
                      .....
T Consensus       195 l~~v~  199 (236)
T 1tl2_A          195 LFGVQ  199 (236)
T ss_dssp             EEEEE
T ss_pred             EEEEe
Confidence            66443

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=94.41  E-value=0.18  Score=43.88  Aligned_cols=146  Identities=10%  Similarity=0.052  Sum_probs=74.0

Q ss_pred             cEEEE--ECCCeEEEEECCCCceEEEEecCCC-CCCceEE---EEE-c----CCCCeEEEEeCCCCcEEEEECCcceeee
Q psy14511        210 DTLAV--ALDTSVYTWNTKTNKTQLLVEYPTY-DNAYISC---VAW-K----PRTTDLAVTNTCTEYIDLWHEQEERLIQ  278 (488)
Q Consensus       210 ~~~~~--~~d~~v~iw~~~~~~~~~~~~~~~~-~~~~i~~---~~~-~----~~~~~l~~~~~~~~~i~i~d~~~~~~~~  278 (488)
                      .++++  ..||.|+.++..+|.....+..+.. ...++..   ... .    ..+..++++ +.+|.+...|+.+|+.+.
T Consensus        57 ~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~G-s~~g~l~ald~~tG~~~W  135 (339)
T 2be1_A           57 ETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTG-SMRTIMYTINMLNGEIIS  135 (339)
T ss_dssp             EEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTTCSEEEECC----------CCEEEEEC-EEEEEEEEEETTTCCEEE
T ss_pred             cEEEEEECCCCEEEEEECCCCcEEeeeccccceeccccccCCCceeecccccccCCEEEEE-ecCCEEEEEECCCCcEEE
Confidence            44544  4799999999988865544443210 1112221   000 0    034466777 899999999999999998


Q ss_pred             eeccccc-------cEEEEE-------ecCCEEEEeecCCeEEEEECcCCCccceeee---cCCc--cE-EEEEEccCCc
Q psy14511        279 KLRTHMH-------QVIAMC-------WNGNLLSCGTIGGNILHYDVRTHSDYPTAIT---REGD--VV-CGLKWSPNGR  338 (488)
Q Consensus       279 ~~~~~~~-------~v~~~~-------~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---~~~~--~i-~~~~~s~~~~  338 (488)
                      .+.....       ...|..       -.+..++.+..+..+.+.+ +++..-...+.   ....  ++ ..-..+.|+.
T Consensus       136 ~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ig~~~y~v~~~~-~sG~~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~  214 (339)
T 2be1_A          136 AFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVIGKTIFELGIHS-YDGASYNVTYSTWQQNVLDVPLALQNTFSKDGM  214 (339)
T ss_dssp             EESTTCBCC--------------------CCEEEEEEEEEECEECC-TTSCCCCCEEEEEECCTTTHHHHTTCSSCSSSC
T ss_pred             EEecCCCcccccccccccccccccccccCCCeEEEecceEEEEEEC-CCCCeEEEecccccccccccccccccccccCCc
Confidence            8864211       011111       1245677777666666655 33221000000   0000  00 0000122466


Q ss_pred             EEEEEecCeEEEEECCCCC
Q psy14511        339 YLASGSNNTVKIWDFRQLD  357 (488)
Q Consensus       339 ~l~~~~d~~i~iwd~~~~~  357 (488)
                      ++++..||.|.-+|..++.
T Consensus       215 ~~~~~~dg~v~A~d~~~G~  233 (339)
T 2be1_A          215 CIAPFRDKSLLASDLDFRI  233 (339)
T ss_dssp             CEEEETTTEEEEECSTTCC
T ss_pred             EEEECCCCEEEEEECCCCc
Confidence            6555446888888877654

>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A

Probab=93.42  E-value=6.7  Score=38.82  Aligned_cols=224  Identities=9%  Similarity=0.022  Sum_probs=119.3

Q ss_pred             CCcEEEEECCCeEEEEECCCCceEEEEecC----CCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeec--
Q psy14511        208 YHDTLAVALDTSVYTWNTKTNKTQLLVEYP----TYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLR--  281 (488)
Q Consensus       208 ~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~--  281 (488)
                      .+.+.+++. +-+.+++..+++........    ......|.++....+|..-+.+  ..| +.++.....-......  
T Consensus       242 ~g~lWigT~-~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWiGT--~~G-l~~~~~~~~~~~~~~~~~  317 (758)
T 3ott_A          242 NGDLLAGTD-NGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIWLGT--DYG-ISLSRYNSALQFIPISQI  317 (758)
T ss_dssp             TCCEEEEET-TEEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCEEEEE--SSS-EEEECCCC-CEEEEHHHH
T ss_pred             CCCEEEEeC-CceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEEEe--CCc-ccccccCCceeEEecccC
Confidence            467777774 56888888777654432211    1134568999888887655544  455 5444332211111110  


Q ss_pred             ---cccccEEEEEec-CCEEEEeecCCeEEEEECcCCCc-cceeee-------cCCccEEEEEEccCCcEEEEEecCeEE
Q psy14511        282 ---THMHQVIAMCWN-GNLLSCGTIGGNILHYDVRTHSD-YPTAIT-------REGDVVCGLKWSPNGRYLASGSNNTVK  349 (488)
Q Consensus       282 ---~~~~~v~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~-------~~~~~i~~~~~s~~~~~l~~~~d~~i~  349 (488)
                         .....|.++..| ...|..|+.+| +..++..++.. ....+.       -....|.++.-.++|++.+.. ++-+.
T Consensus       318 ~~~~~~~~v~~i~~D~~g~lWiGt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt-~~GL~  395 (758)
T 3ott_A          318 TGTGDGNQFYSLFRDSKGFYWFGGANG-LIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQLWIAT-DGSIN  395 (758)
T ss_dssp             SCSCCCCBEEEEEECTTCCEEEEETTE-EEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSCEEEEE-TTEEE
T ss_pred             CCCCCCceEEEEEEcCCCCEEEeeCCc-ceeecccccccceeEEeccCCcCCCCCCCceEEEEECCCCCEEEEe-CCcHh
Confidence               123467888773 34555566554 66666554211 111111       112458888888888766544 66788


Q ss_pred             EEECCCCCCCccc---------ceeeeee--cCCCCEEEEEccCCCCeEEEEeCCCc-----cee---EEEee----ccc
Q psy14511        350 IWDFRQLDAKRPL---------GLIVPKL--KREGRELVTSHGKQDCSLKMWEYPRL-----HLI---EELKI----HQE  406 (488)
Q Consensus       350 iwd~~~~~~~~~~---------~~~~~~~--~~~~~~l~~~~g~~~~~i~i~d~~~~-----~~~---~~~~~----~~~  406 (488)
                      .||..+.+...-.         ...+.++  ..+|+. .+  |...+-+..+|..+.     ...   ..+..    ...
T Consensus       396 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~l-Wi--gT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  472 (758)
T 3ott_A          396 RYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQL-WI--STCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGM  472 (758)
T ss_dssp             EEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEE-EE--EESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCS
T ss_pred             hcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCE-EE--EECCCceEEEccccccccCCcceecccccccccccccc
Confidence            9998765321100         0011122  234443 33  344556888875421     111   11111    123


Q ss_pred             cEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcc
Q psy14511        407 RILSAVLSPDQTCVAAASADETISIWNCFPRDKK  440 (488)
Q Consensus       407 ~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~  440 (488)
                      .|.++...++|++.+.++..+-|..+|..+++..
T Consensus       473 ~i~~i~~d~~g~lWi~~~t~~Gl~~~d~~~~~~~  506 (758)
T 3ott_A          473 FINQIIPDNEGNVWVLLYNNKGIDKINPRTREVT  506 (758)
T ss_dssp             CEEEEEECTTSCEEEEETTCSSEEEEETTTTEEE
T ss_pred             eeeeEEEcCCCCEEEEccCCCCcEEEeCCCCceE
Confidence            5899999899987764444455888888765543

>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B

Probab=93.38  E-value=3.2  Score=35.08  Aligned_cols=221  Identities=11%  Similarity=0.068  Sum_probs=116.7

Q ss_pred             eeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeec
Q psy14511        202 SGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLR  281 (488)
Q Consensus       202 ~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~  281 (488)
                      ..+.......++.. ||.|+.|-.......-. +..  ....|..++....  +.++- . +|.|..|-......+..-.
T Consensus        27 ~~ia~G~~h~~~l~-~G~v~~wG~n~~Gqlg~-p~~--~~~~i~~ia~G~~--hs~~l-~-~G~v~~wG~n~~Gqlg~P~   98 (282)
T 3qhy_B           27 DAIAGGYFHGLALK-GGKVLGWGANLNGQLTM-PAA--TQSGVDAIAAGNY--HSLAL-K-DGEVIAWGGNEDGQTTVPA   98 (282)
T ss_dssp             CEEEECSSEEEEEE-TTEEEEEECCSSSTTSC-CGG--GGSCCCEEEECSS--EEEEE-E-TTEEEEEECCTTSTTCCCG
T ss_pred             cEEEeCCCeEEEEE-CCEEEEEeCCCCCCCCC-Ccc--CCCCEEEEEeCCC--EEEEE-E-CCEEEEeeCCCCCCCCCCc
Confidence            33444555666666 99999998664321111 111  2335666666443  33333 4 8888888654321111111


Q ss_pred             cccccEEEEEecCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCC-c
Q psy14511        282 THMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAK-R  360 (488)
Q Consensus       282 ~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~-~  360 (488)
                      .-...|..++......++-. +|.|+.|-.....+.-... .....|..++...+. .++.. +|.+..|-....... .
T Consensus        99 ~~~~~v~~ia~G~~hs~al~-~G~v~~wG~n~~gqlg~~~-~~~~~i~~i~~G~~~-~~~l~-~G~v~~wG~n~~gqlg~  174 (282)
T 3qhy_B           99 EARSGVDAIAAGAWASYALK-DGKVIAWGDDSDGQTTVPA-EAQSGVTALDGGVYT-ALAVK-NGGVIAWGDNYFGQTTV  174 (282)
T ss_dssp             GGSSSEEEEEEETTEEEEEE-TTEEEEEECCTTSTTSCCG-GGGSSEEEEEECSSE-EEEEE-TTEEEEEECCTTSTTSC
T ss_pred             ccCCCeEEEECcCCEEEEEe-CCeEEEecCCCCCcCCCCc-cCCCCeEEEEcccCE-EEEEE-CCEEEEecCCCCCCCCC
Confidence            12346888888666666666 9999999876544322111 122346666654333 23333 788888876643221 1


Q ss_pred             --ccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCC
Q psy14511        361 --PLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRD  438 (488)
Q Consensus       361 --~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~  438 (488)
                        .+...+..++......++.   .+|.++.|-......+..-......|..++...+...+++   ||.|+.|-.....
T Consensus       175 p~~~~~~v~~i~~G~~hs~al---~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h~~al~---~g~v~~wG~n~~g  248 (282)
T 3qhy_B          175 PAEAQSGVDDVAGGIFHSLAL---KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWYSLALK---NGKVIAWGSSRTA  248 (282)
T ss_dssp             CGGGGSSEEEEEECSSEEEEE---ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSCEEEEE---TTEEEEESTTCCC
T ss_pred             ceecCCCeEEEEecCCEEEEE---ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCCEEEEEE---CCEEEEecCCCCc
Confidence              1111222333333333332   3888888865432211111112235777776554333333   9999999877654


Q ss_pred             cc
Q psy14511        439 KK  440 (488)
Q Consensus       439 ~~  440 (488)
                      +.
T Consensus       249 q~  250 (282)
T 3qhy_B          249 PS  250 (282)
T ss_dssp             CG
T ss_pred             cc
Confidence            44

>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A

Probab=93.08  E-value=0.93  Score=41.96  Aligned_cols=93  Identities=16%  Similarity=0.092  Sum_probs=59.5

Q ss_pred             EEEEEccc----CcccceeecccCceEEEEEEccCCcEEEEec--CCeEEEEeccccCc-----C-C---C-cccccccc
Q psy14511         17 ILHYDVRT----HSDYPTAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDA-----K-R---P-QVNNQCHL   80 (488)
Q Consensus        17 i~iwd~~~----~~~~~~~~~~h~~~V~~l~~sp~g~~las~~--d~~i~vwd~~~~~~-----~-~---~-~~~~~~h~   80 (488)
                      |.|.|...    +..+ ..+-.-......+.++|||++++.++  +.++.|+|++....     . .   . ..... -.
T Consensus       300 v~ViD~~~~~~~~~~~-~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~G  377 (638)
T 3sbq_A          300 TPVLDGRKKDGKDSKF-TRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LG  377 (638)
T ss_dssp             CCEEECSCBTTBCCSS-EEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CC
T ss_pred             eeEEccccccccCCce-EEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CC
Confidence            66777655    2222 22222333446688999999999988  99999999985211     0 0   0 01111 12


Q ss_pred             cceeEEEEecCCCeEEeeeCCcccceEEEEecCC
Q psy14511         81 SAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMN  114 (488)
Q Consensus        81 ~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~  114 (488)
                      -.....+|.++| +.+++--  .|..|..|++..
T Consensus       378 lGPlHt~Fd~~G-~aYTtlf--idSqvvkWni~~  408 (638)
T 3sbq_A          378 LGPLHTTFDGRG-NAYTTLF--IDSQVVKWNMEE  408 (638)
T ss_dssp             SCEEEEEECSSS-EEEEEET--TTTEEEEEEHHH
T ss_pred             CcccEEEECCCC-ceEeeee--ecceEEEEeccH
Confidence            356778999999 5666665  399999999864

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=92.93  E-value=4.5  Score=35.54  Aligned_cols=59  Identities=10%  Similarity=0.137  Sum_probs=35.8

Q ss_pred             CCCEEEEEccCCCCeEEEEeCCCcceeEE--E-eeccccEEEEEEcCCCCEEEEEe-CCCcEEEEec
Q psy14511        372 EGRELVTSHGKQDCSLKMWEYPRLHLIEE--L-KIHQERILSAVLSPDQTCVAAAS-ADETISIWNC  434 (488)
Q Consensus       372 ~~~~l~~~~g~~~~~i~i~d~~~~~~~~~--~-~~~~~~v~~~~~s~~~~~l~t~~-~dg~v~iw~~  434 (488)
                      +|+++++  ....+.|...++..++....  + ......+..+++.|||.++++.. .+|  +||.+
T Consensus       288 ~g~l~v~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td~~~g--~I~ri  350 (353)
T 2g8s_A          288 QQKLFIG--ALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTDESSG--ELLKV  350 (353)
T ss_dssp             TTEEEEE--ETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEECSTTE--EEEEE
T ss_pred             CCcEEEE--EccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEEeCCCC--EEEEE
Confidence            4666665  45567777777765543332  1 12234789999999998666543 344  44444

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*

Probab=92.10  E-value=9.5  Score=37.25  Aligned_cols=111  Identities=14%  Similarity=0.061  Sum_probs=54.8

Q ss_pred             CCceEEEeecC----CeEEEEEcccCccccee-------ecccCceEEEEEEccCCcEEEEec-C------CeEEEEecc
Q psy14511          4 NGNLLSCGTIG----GNILHYDVRTHSDYPTA-------ITREGDVVCGLKWSPNGRYLASGS-N------NTVKIWDFR   65 (488)
Q Consensus         4 dg~~la~g~~d----g~i~iwd~~~~~~~~~~-------~~~h~~~V~~l~~sp~g~~las~~-d------~~i~vwd~~   65 (488)
                      ++.+++.|+.+    ..+.+||..+++-....       +......-.++.+..++++++.|+ +      ..+.+||..
T Consensus       397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~  476 (695)
T 2zwa_A          397 GNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMK  476 (695)
T ss_dssp             SSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETT
T ss_pred             CCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCC
Confidence            66777888753    46888998776422111       111111122233332788888776 2      367888887


Q ss_pred             ccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCee
Q psy14511         66 QLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKE  117 (488)
Q Consensus        66 ~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~  117 (488)
                      +.+- ..+..+...... .+++...+++ +++.|+...++.+.+||+.+...
T Consensus       477 t~~W-~~~~~~p~~R~~-h~~~~~~~~~-iyv~GG~~~~~~v~~yd~~t~~W  525 (695)
T 2zwa_A          477 TREW-SMIKSLSHTRFR-HSACSLPDGN-VLILGGVTEGPAMLLYNVTEEIF  525 (695)
T ss_dssp             TTEE-EECCCCSBCCBS-CEEEECTTSC-EEEECCBCSSCSEEEEETTTTEE
T ss_pred             CCcE-EECCCCCCCccc-ceEEEEcCCE-EEEECCCCCCCCEEEEECCCCce
Confidence            6331 111111111111 1222223555 44444421122688888877653

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=91.90  E-value=6  Score=34.54  Aligned_cols=221  Identities=9%  Similarity=-0.017  Sum_probs=118.2

Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCccee--eeee----ccccccEEEEEec-----CCEEEEe---ecCCe
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERL--IQKL----RTHMHQVIAMCWN-----GNLLSCG---TIGGN  305 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~--~~~~----~~~~~~v~~~~~~-----~~~l~~~---~~dg~  305 (488)
                      .-.....++|.|+|+.+++- ...|.|++++...++.  +..+    .........|+++     +..|+..   ..++.
T Consensus        30 gL~~P~~ia~~pdG~llVte-r~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~  108 (347)
T 3das_A           30 GLNSPWGLAPLPGGDLLVSS-RDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNR  108 (347)
T ss_dssp             CCSSEEEEEECTTSCEEEEE-TTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEE
T ss_pred             CCCCceEEEEcCCCcEEEEE-ecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCE
Confidence            34467899999999866665 4489999998655432  2222    1235567888883     3444432   23455


Q ss_pred             EEEEECcCCC-------ccce---eee---cCCccEEEEEEccCCcEEEEEec--------------CeEEEEECCCCC-
Q psy14511        306 ILHYDVRTHS-------DYPT---AIT---REGDVVCGLKWSPNGRYLASGSN--------------NTVKIWDFRQLD-  357 (488)
Q Consensus       306 i~i~d~~~~~-------~~~~---~~~---~~~~~i~~~~~s~~~~~l~~~~d--------------~~i~iwd~~~~~-  357 (488)
                      |.-|.+....       ....   .+.   .|.  -..++|.|||.+.++.+|              +.|.-.+....- 
T Consensus       109 v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~--g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip  186 (347)
T 3das_A          109 IVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHN--GGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPA  186 (347)
T ss_dssp             EEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCC--CCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBC
T ss_pred             EEEEEeCCCCcccccCCCcEEEEEcCCCCCCcc--CccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCcc
Confidence            6666655411       1111   111   232  356999999987777542              444444443210 


Q ss_pred             CCccc---cee--------eeeecCCCCEEEEEccCCCCeEEEEeCCCc------------------ceeEEEeeccccE
Q psy14511        358 AKRPL---GLI--------VPKLKREGRELVTSHGKQDCSLKMWEYPRL------------------HLIEELKIHQERI  408 (488)
Q Consensus       358 ~~~~~---~~~--------~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~------------------~~~~~~~~~~~~v  408 (488)
                      ...++   ..+        -.+|.|+|++.++-.|. ++.-.|--+..+                  .++..+..+....
T Consensus       187 ~~nPf~~~~i~a~G~RNp~Gla~dp~G~L~~~d~g~-~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap  265 (347)
T 3das_A          187 PGNPFPGSPVYSYGHRNVQGLAWDDKQRLFASEFGQ-DTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASP  265 (347)
T ss_dssp             TTCSSTTCCEEEBCCSBCCEEEECTTCCEEEEECCS-SSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCE
T ss_pred             CCCCCCCCeEEeeCCCCcceEEECCCCCEEEEecCC-CCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCCC
Confidence            00000   011        11888888777664332 221222211111                  1122332222356


Q ss_pred             EEEEEcCCCCEEEEEeCCCcEEEEecCCCCcc----c-cccccCCcceEEeecCCCceEEEE
Q psy14511        409 LSAVLSPDQTCVAAASADETISIWNCFPRDKK----R-KARQVGSGSSLEFAILKQPVSLTA  465 (488)
Q Consensus       409 ~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~----~-~~~~~~~v~~~~~s~~~~~~~~~~  465 (488)
                      ..++|. ++..+...-..+.|....+......    . +....+.+..++..|||..+....
T Consensus       266 ~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td  326 (347)
T 3das_A          266 SGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS  326 (347)
T ss_dssp             EEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred             cceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence            677775 4666666556667776677654321    1 122346788999999987665443

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=90.57  E-value=10  Score=34.71  Aligned_cols=103  Identities=9%  Similarity=0.124  Sum_probs=59.4

Q ss_pred             CceEEEEEcCCCCeEEEEeCCCCcEEEEECCccee--eeeecc------ccccEEEEEec-----CCEEEEeec------
Q psy14511        242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERL--IQKLRT------HMHQVIAMCWN-----GNLLSCGTI------  302 (488)
Q Consensus       242 ~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~--~~~~~~------~~~~v~~~~~~-----~~~l~~~~~------  302 (488)
                      .....++|.|+|+.+++- ...+.|++++..+++.  +..+..      .......|+++     +..|+....      
T Consensus        27 ~~P~~~a~~pdG~l~V~e-~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~  105 (454)
T 1cru_A           27 NKPHALLWGPDNQIWLTE-RATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS  105 (454)
T ss_dssp             SSEEEEEECTTSCEEEEE-TTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred             CCceEEEEcCCCcEEEEE-cCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence            356799999999866665 4445788887654432  222221      24567788885     556655542      


Q ss_pred             -------CCeEEEEECcCCC-------ccceeeec-CCccEEEEEEccCCcEEEEEec
Q psy14511        303 -------GGNILHYDVRTHS-------DYPTAITR-EGDVVCGLKWSPNGRYLASGSN  345 (488)
Q Consensus       303 -------dg~i~i~d~~~~~-------~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~d  345 (488)
                             ...|.-++.....       .....+.. .......|+|.|||++.++.+|
T Consensus       106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd  163 (454)
T 1cru_A          106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD  163 (454)
T ss_dssp             --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred             CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence                   2345556554321       01111111 1123678999999987777665

>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*

Probab=88.77  E-value=12  Score=33.06  Aligned_cols=64  Identities=14%  Similarity=0.204  Sum_probs=46.3

Q ss_pred             CCeEEEEECCCC--ceEEEEecCC---CCCCceEEEEEc---CC----CCeEEEEeCCCCcEEEEECCcceeeeee
Q psy14511        217 DTSVYTWNTKTN--KTQLLVEYPT---YDNAYISCVAWK---PR----TTDLAVTNTCTEYIDLWHEQEERLIQKL  280 (488)
Q Consensus       217 d~~v~iw~~~~~--~~~~~~~~~~---~~~~~i~~~~~~---~~----~~~l~~~~~~~~~i~i~d~~~~~~~~~~  280 (488)
                      ..+|.+||+.++  +.++.+.++.   .....+..+++.   |.    +.+++++-...+.|.++|+.+++..+.+
T Consensus       122 ~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~  197 (381)
T 3q6k_A          122 RPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVT  197 (381)
T ss_dssp             CCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred             CceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEc
Confidence            357889999999  8888887752   124567888887   32    4566666456788999999998777665

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=87.31  E-value=17  Score=33.17  Aligned_cols=57  Identities=14%  Similarity=0.278  Sum_probs=36.8

Q ss_pred             eeeeC-CCcEEEEECCC-eEEEEECCCCceEEEEecCCC-----CCCceEEEEEcCC---CCeEEEE
Q psy14511        203 GLDWG-YHDTLAVALDT-SVYTWNTKTNKTQLLVEYPTY-----DNAYISCVAWKPR---TTDLAVT  259 (488)
Q Consensus       203 ~~~~~-~~~~~~~~~d~-~v~iw~~~~~~~~~~~~~~~~-----~~~~i~~~~~~~~---~~~l~~~  259 (488)
                      .+.+. .+.++++...+ .|++++..++.......+...     .......++|+|+   +..|+++
T Consensus        31 ~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~   97 (454)
T 1cru_A           31 ALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYIS   97 (454)
T ss_dssp             EEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEE
T ss_pred             EEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEE
Confidence            45553 35788888775 799998766655444433210     2456779999996   6677766

>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B

Probab=85.14  E-value=16  Score=30.74  Aligned_cols=140  Identities=11%  Similarity=0.042  Sum_probs=75.4

Q ss_pred             eeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccc
Q psy14511        204 LDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTH  283 (488)
Q Consensus       204 ~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~  283 (488)
                      +.......++.. +|.|+.|-........   .+......|..++...+  ..++- . +|.|..|-......+..-...
T Consensus       107 ia~G~~hs~al~-~G~v~~wG~n~~gqlg---~~~~~~~~i~~i~~G~~--~~~~l-~-~G~v~~wG~n~~gqlg~p~~~  178 (282)
T 3qhy_B          107 IAAGAWASYALK-DGKVIAWGDDSDGQTT---VPAEAQSGVTALDGGVY--TALAV-K-NGGVIAWGDNYFGQTTVPAEA  178 (282)
T ss_dssp             EEEETTEEEEEE-TTEEEEEECCTTSTTS---CCGGGGSSEEEEEECSS--EEEEE-E-TTEEEEEECCTTSTTSCCGGG
T ss_pred             EECcCCEEEEEe-CCeEEEecCCCCCcCC---CCccCCCCeEEEEcccC--EEEEE-E-CCEEEEecCCCCCCCCCceec
Confidence            333455677777 9999999866422111   11102345666665433  33334 4 788988865542222111112


Q ss_pred             cccEEEEEecCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCC
Q psy14511        284 MHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQ  355 (488)
Q Consensus       284 ~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~  355 (488)
                      ...|..++......++- .+|.++.|-.....+.-.... ....|..++-.... .++.. ++.+..|-...
T Consensus       179 ~~~v~~i~~G~~hs~al-~~G~v~~wG~n~~gqlg~p~~-~~~~v~~i~~G~~h-~~al~-~g~v~~wG~n~  246 (282)
T 3qhy_B          179 QSGVDDVAGGIFHSLAL-KDGKVIAWGDNRYKQTTVPTE-ALSGVSAIASGEWY-SLALK-NGKVIAWGSSR  246 (282)
T ss_dssp             GSSEEEEEECSSEEEEE-ETTEEEEEECCTTSTTCCCGG-GGSSCCEEEECSSC-EEEEE-TTEEEEESTTC
T ss_pred             CCCeEEEEecCCEEEEE-ECCeEEEEECCCCCCCCCCcc-cCCCceEEEcCCCE-EEEEE-CCEEEEecCCC
Confidence            35688888854444444 699999998765433221111 11235556554433 33444 77777775443

>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}

Probab=82.59  E-value=38  Score=33.07  Aligned_cols=219  Identities=7%  Similarity=0.024  Sum_probs=114.0

Q ss_pred             eEEEE-EcCCCCeEEEEeCCC----CcEEEEECCcceeeee-ec-cccc------cEEEEEe-cCCEEEEee--------
Q psy14511        244 ISCVA-WKPRTTDLAVTNTCT----EYIDLWHEQEERLIQK-LR-THMH------QVIAMCW-NGNLLSCGT--------  301 (488)
Q Consensus       244 i~~~~-~~~~~~~l~~~~~~~----~~i~i~d~~~~~~~~~-~~-~~~~------~v~~~~~-~~~~l~~~~--------  301 (488)
                      ...+. ++|++++++++-+..    ..++++|+.+++.+.. +. .-+.      ....++| +++.++.+.        
T Consensus       131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~  210 (711)
T 4hvt_A          131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEIT  210 (711)
T ss_dssp             EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBC
T ss_pred             EeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcC
Confidence            34445 889999888763333    3799999999877632 22 0001      1133466 555554432        


Q ss_pred             ---cCCeEEEEECcCCCc-cceeeecCCcc-EEEEEEccCCcE-----EEEEe-c---CeEEEEECCCCCCC-ccccee-
Q psy14511        302 ---IGGNILHYDVRTHSD-YPTAITREGDV-VCGLKWSPNGRY-----LASGS-N---NTVKIWDFRQLDAK-RPLGLI-  365 (488)
Q Consensus       302 ---~dg~i~i~d~~~~~~-~~~~~~~~~~~-i~~~~~s~~~~~-----l~~~~-d---~~i~iwd~~~~~~~-~~~~~~-  365 (488)
                         ....++.|.+-+... -...+...... -.....++++++     +++.+ +   ..+.+.+....... ..+... 
T Consensus       211 ~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  290 (711)
T 4hvt_A          211 SSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMPS  290 (711)
T ss_dssp             TTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSCT
T ss_pred             cCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecCC
Confidence               124688888876532 22333333322 234556677662     44433 3   45666665532110 111100 


Q ss_pred             -ee-eecCCCCEEEEEcc--------CCCCeEEEEeCCCcc-------eeEE-Ee-eccccEEEEEEcCCCCEEEEEeCC
Q psy14511        366 -VP-KLKREGRELVTSHG--------KQDCSLKMWEYPRLH-------LIEE-LK-IHQERILSAVLSPDQTCVAAASAD  426 (488)
Q Consensus       366 -~~-~~~~~~~~l~~~~g--------~~~~~i~i~d~~~~~-------~~~~-~~-~~~~~v~~~~~s~~~~~l~t~~~d  426 (488)
                       .. ....++++++....        ...+.|...|+.++.       .... +. .....+..+.|..+ .++++...+
T Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~~~~~  369 (711)
T 4hvt_A          291 DATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLATYDN  369 (711)
T ss_dssp             TCEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEEEEET
T ss_pred             cceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEEEEEC
Confidence             11 23455655554211        146778899987642       2233 32 23446788999876 567777777


Q ss_pred             Cc--EEEEecCCCC--ccc-c-ccccCCcceEEeecCCCceEE
Q psy14511        427 ET--ISIWNCFPRD--KKR-K-ARQVGSGSSLEFAILKQPVSL  463 (488)
Q Consensus       427 g~--v~iw~~~~~~--~~~-~-~~~~~~v~~~~~s~~~~~~~~  463 (488)
                      +.  +.++++.+++  ... . ....+.+.....++++..+.+
T Consensus       370 ~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~  412 (711)
T 4hvt_A          370 VVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALI  412 (711)
T ss_dssp             TEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEE
T ss_pred             CEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEE
Confidence            64  6777776653  211 1 111234555555566555433

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	488
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	4e-18
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	3e-06
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	2e-05
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	6e-04
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	2e-16
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	3e-11
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	1e-09
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	2e-09
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	3e-05
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	6e-05
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	3e-15
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	3e-10
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	5e-04
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	6e-04
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	5e-15
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	1e-04
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	5e-04
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	0.001
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	0.003
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	8e-15
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	7e-13
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	2e-10
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	4e-08
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	1e-05
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	9e-05
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	4e-14
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	2e-11
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	5e-09
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	9e-08
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	3e-06
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	1e-05
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	1e-05
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	2e-13
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	8e-10
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	5e-06
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	2e-12
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	5e-05
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	0.003
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	8e-12
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	2e-09
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	2e-11
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	3e-10
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	4e-05
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	1e-04
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	4e-10
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	0.001
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	0.001
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	1e-09
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	7e-08
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	7e-07
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	3e-09
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	3e-09
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	7e-08
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	0.002
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	4e-09
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	2e-05
d1qksa2	432	b.70.2.1 (A:136-567) C-terminal (heme d1) domain o	3e-06
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	2e-05
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	8e-05
d2bbkh_	355	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	3e-05
d2bbkh_	355	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	0.002
d1ri6a_	333	b.69.11.1 (A:) Putative isomerase YbhE {Escherichi	4e-05
d1hzua2	426	b.70.2.1 (A:118-543) C-terminal (heme d1) domain o	2e-04
d1l0qa2	301	b.69.2.3 (A:1-301) Surface layer protein {Archaeon	6e-04
d1mdah_	368	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	0.001

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.9 bits (203), Expect = 4e-18
 Identities = 37/320 (11%), Positives = 86/320 (26%), Gaps = 39/320 (12%)

Query: 36  GDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRP--QVNNQCHLSAVKAIAWCPWEP 93
           G+VVC +  S   R++ +G    VK+WD      K P  Q++     + +++    P + 
Sbjct: 51  GEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLP-DG 109

Query: 94  TLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEI 153
             L  GG     ++    +   + K  + + +       IS   +      S        
Sbjct: 110 CTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWD 169

Query: 154 DRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLA 213
              + L +                                                +   
Sbjct: 170 LHNQTLVR---------------------------------QFQGHTDGASCIDISNDGT 196

Query: 214 VALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE 273
                 +       +  +          + I  + + P    LAV    +    L   + 
Sbjct: 197 KLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKP 256

Query: 274 ERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKW 333
           ++    L       +   + G           +  +     +      ++E   V     
Sbjct: 257 DKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGA--SIFQSKESSSVLSCDI 314

Query: 334 SPNGRYLASGS-NNTVKIWD 352
           S + +Y+ +GS +    +++
Sbjct: 315 SVDDKYIVTGSGDKKATVYE 334

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.7 bits (109), Expect = 3e-06
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 325 GDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLI 365
           G+VVC +  S   R++ +G    VK+WD      K P+  +
Sbjct: 51  GEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQL 91

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.0 bits (102), Expect = 2e-05
 Identities = 7/64 (10%), Positives = 21/64 (32%), Gaps = 3/64 (4%)

Query: 1   MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTV 59
             + G           +  +     +      ++E   V     S + +Y+ +GS +   
Sbjct: 273 FAYCGKWFVSTGKDNLLNAWRTPYGA--SIFQSKESSSVLSCDISVDDKYIVTGSGDKKA 330

Query: 60  KIWD 63
            +++
Sbjct: 331 TVYE 334

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (91), Expect = 6e-04
 Identities = 32/250 (12%), Positives = 67/250 (26%), Gaps = 6/250 (2%)

Query: 211 TLAVALDTSVYTWNTKTNKTQLLVEYPTYDN--AYISCVAWKPRTTDLAV---TNTCTEY 265
            +       V  W+      +  V      N   YI      P    L V    +T + +
Sbjct: 65  HVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIW 124

Query: 266 IDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREG 325
                    +            +A+  +  +       GNI  +D+   +          
Sbjct: 125 DLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD 184

Query: 326 DVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLK-REGRELVTSHGKQD 384
              C    +   +    G +NTV+ WD R+    +                        +
Sbjct: 185 GASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGME 244

Query: 385 CSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKAR 444
            S     +       +L +H+  +LS   +       +   D  ++ W         +++
Sbjct: 245 SSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK 304

Query: 445 QVGSGSSLEF 454
           +  S  S + 
Sbjct: 305 ESSSVLSCDI 314

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 77.9 bits (190), Expect = 2e-16
 Identities = 38/325 (11%), Positives = 92/325 (28%), Gaps = 34/325 (10%)

Query: 37  DVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTL 95
             V  + + P    + S S + T+K+WD    +    +   + H  +V+ I++       
Sbjct: 18  SPVTRVIFHPVFSVMVSASEDATIKVWD---YETGDFERTLKGHTDSVQDISFDHS---- 70

Query: 96  LATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDR 155
                                  C      +  + +             +        + 
Sbjct: 71  -----------------GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNG 113

Query: 156 KKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVA 215
             +++ S+        ++T   +      +    +  P+       S  +        VA
Sbjct: 114 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 173

Query: 216 LDTSVYTWNTKTNKTQLLVEYPTYDNAYIS-----CVAWKPRTTDLAVTNTCTEYIDLWH 270
                       +  + +   P    + IS           +     ++ +  + I +W 
Sbjct: 174 TKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWD 233

Query: 271 EQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVV 328
                 +  L  H + V  + +   G  +        +  +D +      T +      V
Sbjct: 234 VSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKT-LNAHEHFV 292

Query: 329 CGLKWSPNGRYLASGS-NNTVKIWD 352
             L +     Y+ +GS + TVK+W+
Sbjct: 293 TSLDFHKTAPYVVTGSVDQTVKVWE 317

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 62.1 bits (149), Expect = 3e-11
 Identities = 38/239 (15%), Positives = 76/239 (31%), Gaps = 29/239 (12%)

Query: 221 YTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKL 280
                  +          + + +           D  V+ +  + I +W  Q    ++  
Sbjct: 80  DMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF 139

Query: 281 RTHMHQVIAMCWN--GNLLSCGTIGGNILHYDVRT---------HSDYPTAITREGDVVC 329
             H   V  +  N  G L++  +    +  + V T         H      I+   +   
Sbjct: 140 TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSY 199

Query: 330 G----------LKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPL-----GLIVPKLKREG 373
                       K    G +L SGS + T+K+WD         L      +        G
Sbjct: 200 SSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGG 259

Query: 374 RELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIW 432
           + +++     D +L++W+Y     ++ L  H+  + S         V   S D+T+ +W
Sbjct: 260 KFILS--CADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 316

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 57.1 bits (136), Expect = 1e-09
 Identities = 38/243 (15%), Positives = 84/243 (34%), Gaps = 31/243 (12%)

Query: 217 DTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERL 276
           D ++  W+ +T           + ++              + +   T  +  +   E   
Sbjct: 38  DATIKVWDYETGD--FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIR 95

Query: 277 IQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPN 336
                 H    +++  NG+ +   +    I  ++V+T     T  T   + V  ++ + +
Sbjct: 96  TMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKT-FTGHREWVRMVRPNQD 154

Query: 337 GRYLASGSN-NTVKIWDFRQLDAKRPL-------------------------GLIVPKLK 370
           G  +AS SN  TV++W     + K  L                         G    K  
Sbjct: 155 GTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSG 214

Query: 371 REGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETIS 430
           + G  L++  G +D ++KMW+      +  L  H   +   +       + + + D+T+ 
Sbjct: 215 KPGPFLLS--GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLR 272

Query: 431 IWN 433
           +W+
Sbjct: 273 VWD 275

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 56.7 bits (135), Expect = 2e-09
 Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 8/111 (7%)

Query: 1   MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTV 59
               G  L  G+    I  +DV T     T +    + V G+ +   G+++ S + + T+
Sbjct: 213 SGKPGPFLLSGSRDKTIKMWDVSTGMCLMT-LVGHDNWVRGVLFHSGGKFILSCADDKTL 271

Query: 60  KIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLW 110
           ++WD++    KR       H   V ++ +    P  + TG    DQTV++W
Sbjct: 272 RVWDYKN---KRCMKTLNAHEHFVTSLDFHKTAP-YVVTGSV--DQTVKVW 316

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.6 bits (101), Expect = 3e-05
 Identities = 12/64 (18%), Positives = 23/64 (35%), Gaps = 2/64 (3%)

Query: 1   MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTV 59
               G  +        +  +D +      T +      V  L +     Y+ +GS + TV
Sbjct: 255 FHSGGKFILSCADDKTLRVWDYKNKRCMKT-LNAHEHFVTSLDFHKTAPYVVTGSVDQTV 313

Query: 60  KIWD 63
           K+W+
Sbjct: 314 KVWE 317

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.8 bits (99), Expect = 6e-05
 Identities = 25/113 (22%), Positives = 50/113 (44%), Gaps = 4/113 (3%)

Query: 326 DVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPL---GLIVPKLKREGRELVTSHG 381
             V  + + P    + S S + T+K+WD+   D +R L      V  +  +    + +  
Sbjct: 18  SPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASC 77

Query: 382 KQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNC 434
             D ++K+W++     I  +  H   + S  + P+   + +AS D+TI +W  
Sbjct: 78  SADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEV 130

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.5 bits (181), Expect = 3e-15
 Identities = 49/322 (15%), Positives = 96/322 (29%), Gaps = 18/322 (5%)

Query: 44  WSPNGRYLASGSN-NTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGI 102
               G  + SGS+ NT+K+W        +       H   V +           +T   +
Sbjct: 23  LQFCGNRIVSGSDDNTLKVWS---AVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTL 79

Query: 103 CDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQS 162
                     ++              +++ +    +     +  +  G  +        +
Sbjct: 80  KVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAA 139

Query: 163 KRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVA--LDTSV 220
            R V         G     VK            +           +     V+  LDTS+
Sbjct: 140 VRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSI 199

Query: 221 YTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKL 280
             W+ +T      +   T   +  S +  K         ++  +  D+   Q  + +Q  
Sbjct: 200 RVWDVETGN---CIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGP 256

Query: 281 RTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITRE----GDVVCGLKWSPN 336
             H   V  + +N N +   +  G +  +D++T       +T E    G VV  ++ S  
Sbjct: 257 NKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNT 316

Query: 337 GRYLASGSNN-----TVKIWDF 353
               A GS N      + + DF
Sbjct: 317 KLVCAVGSRNGTEETKLLVLDF 338

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.4 bits (142), Expect = 3e-10
 Identities = 33/205 (16%), Positives = 71/205 (34%), Gaps = 17/205 (8%)

Query: 243 YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTI 302
           +++ V          V+      + +W  + E  +  L+ H ++V ++ ++G  +  G++
Sbjct: 136 HVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSL 195

Query: 303 GGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASG-SNNTVKIWDFRQLDAKRP 361
             +I  +DV T +   T    +               L SG +++TVKIWD +     + 
Sbjct: 196 DTSIRVWDVETGNCIHTLTGHQSLTSG---MELKDNILVSGNADSTVKIWDIKTGQCLQT 252

Query: 362 LGLIVPKLKREGRELVTSH----GKQDCSLKMWEYPRLHLIEELKI-----HQERILSAV 412
           L                 +       D ++K+W+      I  L           +    
Sbjct: 253 LQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIR 312

Query: 413 LSPDQTCVAAASADET----ISIWN 433
            S  +   A  S + T    + + +
Sbjct: 313 ASNTKLVCAVGSRNGTEETKLLVLD 337

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (91), Expect = 5e-04
 Identities = 33/212 (15%), Positives = 72/212 (33%), Gaps = 8/212 (3%)

Query: 223 WNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRT 282
           W     K+  +++   +D+  I+C+ +     +  V+ +    + +W     + ++ L  
Sbjct: 1   WRRGELKSPKVLK--GHDDHVITCLQFCG---NRIVSGSDDNTLKVWSAVTGKCLRTLVG 55

Query: 283 HMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLAS 342
           H   V +     N++  G+    +  ++  T     T       V C           + 
Sbjct: 56  HTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSR 115

Query: 343 GSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELK 402
            +   V   +  Q       G +      +        G  D  +K+W+      +  L+
Sbjct: 116 DATLRVWDIETGQCLHVLM-GHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQ 174

Query: 403 IHQERILSAVLSPDQTCVAAASADETISIWNC 434
            H  R+    L  D   V + S D +I +W+ 
Sbjct: 175 GHTNRV--YSLQFDGIHVVSGSLDTSIRVWDV 204

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (90), Expect = 6e-04
 Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 9/73 (12%)

Query: 1   MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITRE----GDVVCGLKWSPNGRYLASGSN 56
           + +N N +   +  G +  +D++T       +T E    G VV  ++ S      A GS 
Sbjct: 266 LQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSR 325

Query: 57  N-----TVKIWDF 64
           N      + + DF
Sbjct: 326 NGTEETKLLVLDF 338

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 74.1 bits (180), Expect = 5e-15
 Identities = 31/320 (9%), Positives = 82/320 (25%), Gaps = 15/320 (4%)

Query: 37  DVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTL 95
           D +  +K  P+   L   S + ++ ++ F         + +  +   +    +       
Sbjct: 12  DYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQ 71

Query: 96  LATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDR 155
           +  G    +            +       +           ++        L+   +   
Sbjct: 72  IYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRN 131

Query: 156 KKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVA 215
                           ++ L     KVK K   +    S +     +     +   L   
Sbjct: 132 YGD---------GVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCED 182

Query: 216 LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEER 275
            + ++     K     + +     +    S +  +                  +  +  R
Sbjct: 183 DNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHR 242

Query: 276 LIQKLRTHMHQVIAMCWNGN--LLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKW 333
           L  K     + V ++ ++     L      G I  ++++T            D V   K 
Sbjct: 243 LNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVV--KI 300

Query: 334 SPNGRYLASGS-NNTVKIWD 352
           + +   L   + ++T K   
Sbjct: 301 ACSDNILCLATSDDTFKTNA 320

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.8 bits (96), Expect = 1e-04
 Identities = 7/38 (18%), Positives = 15/38 (39%), Gaps = 1/38 (2%)

Query: 326 DVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPL 362
           D +  +K  P+   L   S + ++ ++ F        L
Sbjct: 12  DYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDL 49

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.8 bits (91), Expect = 5e-04
 Identities = 26/273 (9%), Positives = 60/273 (21%), Gaps = 31/273 (11%)

Query: 204 LDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCT 263
            ++  +  L + + T                +  T + A +          D  +  +  
Sbjct: 62  CNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWD 121

Query: 264 EYIDLWHEQEERLIQKLR--------THMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHS 315
             I++   +                    +++  M  N + L  G     +  + +    
Sbjct: 122 GLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCE 181

Query: 316 DYPTAITREGDV---VCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKR 371
           D    I   G                  A  S +  V +  F                  
Sbjct: 182 DDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCH 241

Query: 372 EGRELVTSHGKQ------------------DCSLKMWEYPRLHLIEELKIHQERILSAVL 413
                 T+                      D  +  W       I+      E      +
Sbjct: 242 RLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNE-DSVVKI 300

Query: 414 SPDQTCVAAASADETISIWNCFPRDKKRKARQV 446
           +     +  A++D+T        +  +  A  +
Sbjct: 301 ACSDNILCLATSDDTFKTNAAIDQTIELNASSI 333

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.3 bits (87), Expect = 0.001
 Identities = 37/279 (13%), Positives = 72/279 (25%), Gaps = 32/279 (11%)

Query: 209 HDTLAVA-LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYID 267
              L +   D S+  +        + +         + C  +   T       T    I 
Sbjct: 23  KSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEIL 82

Query: 268 LWHEQE---ERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITRE 324
                     + +     ++       +  + L   +  G I   D R + D   A+   
Sbjct: 83  KVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNL 142

Query: 325 GDVVCG------LKWSPNGRYLASGSNNTVKIWDFRQLDAKR------------------ 360
                          + + R +   +N+ V+ +     +                     
Sbjct: 143 NSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALL 202

Query: 361 -PLGLIVPKLKREGR---ELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPD 416
                       +GR   E     G    S K + +    L  +       + S   SP 
Sbjct: 203 PKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPR 262

Query: 417 QTCVAAASADETISIWNCFPRDKKRKARQVGSGSSLEFA 455
              +  A +D  IS WN   R K +   +    S ++ A
Sbjct: 263 HKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA 301

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.5 bits (85), Expect = 0.003
 Identities = 6/49 (12%), Positives = 22/49 (44%)

Query: 397 LIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKARQ 445
           +++  +  ++ I    + P ++ +   S D +++++    + K     Q
Sbjct: 3   IVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQ 51

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 73.2 bits (178), Expect = 8e-15
 Identities = 51/358 (14%), Positives = 97/358 (27%), Gaps = 74/358 (20%)

Query: 79  HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQ 138
           HL+ + A+ W   +  LL +     D  + +W+S    +   +   S        +    
Sbjct: 54  HLAKIYAMHWGT-DSRLLVSAS--QDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGN 110

Query: 139 KKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIIND 198
                    +      + +  N                                      
Sbjct: 111 YVACGGLDNICSIYNLKTREGNVRVSRELAGHT--------------------------G 144

Query: 199 FYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAV 258
           + +       +  +  + DT+   W+ +T +        T D   +S          L V
Sbjct: 145 YLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDT----RLFV 200

Query: 259 TNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNI-LHYDVRTHS 315
           +  C     LW  +E    Q    H   + A+C+  NGN  + G+      L        
Sbjct: 201 SGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQE 260

Query: 316 DYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRE 375
               +       +  + +S +GR L +G +                              
Sbjct: 261 LMTYSHDNIICGITSVSFSKSGRLLLAGYD------------------------------ 290

Query: 376 LVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWN 433
                   D +  +W+  +      L  H  R+    ++ D   VA  S D  + IWN
Sbjct: 291 --------DFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 67.5 bits (163), Expect = 7e-13
 Identities = 39/320 (12%), Positives = 85/320 (26%), Gaps = 39/320 (12%)

Query: 37  DVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLL 96
             +  + W  + R L S S +  K+  +      +         S V   A+ P    + 
Sbjct: 56  AKIYAMHWGTDSRLLVSASQDG-KLIIWDSYTTNKVHAIPLRS-SWVMTCAYAPSGNYVA 113

Query: 97  ATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRK 156
             G         L                           + +                 
Sbjct: 114 CGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIET 173

Query: 157 KVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVAL 216
                +    +                              D  +  L       ++ A 
Sbjct: 174 GQQTTTFTGHT-----------------------------GDVMSLSLAPDTRLFVSGAC 204

Query: 217 DTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAV-TNTCTEYIDLWHEQEER 275
           D S   W+ +    +          + I+ + + P     A  ++  T  +      +E 
Sbjct: 205 DASAKLWDVREGMCRQTFTGHE---SDINAICFFPNGNAFATGSDDATCRLFDLRADQEL 261

Query: 276 LIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKW 333
           +       +  + ++ +  +G LL  G    N   +D    +D    +    + V  L  
Sbjct: 262 MTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALK-ADRAGVLAGHDNRVSCLGV 320

Query: 334 SPNGRYLASGS-NNTVKIWD 352
           + +G  +A+GS ++ +KIW+
Sbjct: 321 TDDGMAVATGSWDSFLKIWN 340

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 60.1 bits (144), Expect = 2e-10
 Identities = 20/110 (18%), Positives = 37/110 (33%), Gaps = 8/110 (7%)

Query: 4   NGNLLSCGTIGGNI-LHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKI 61
           NGN  + G+      L            +       +  + +S +GR L +G  +    +
Sbjct: 237 NGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNV 296

Query: 62  WDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWN 111
           WD               H + V  +     +   +ATG    D  +++WN
Sbjct: 297 WD---ALKADRAGVLAGHDNRVSCLGVTD-DGMAVATGSW--DSFLKIWN 340

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 52.8 bits (125), Expect = 4e-08
 Identities = 20/122 (16%), Positives = 45/122 (36%), Gaps = 4/122 (3%)

Query: 1   MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVK 60
           +  +  L   G    +   +DVR      T    E D+   + + PNG   A+GS++   
Sbjct: 192 LAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINA-ICFFPNGNAFATGSDDATC 250

Query: 61  IWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCH 120
                + D +    ++   +  + ++++      LLA      D    +W+++       
Sbjct: 251 RLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYD---DFNCNVWDALKADRAGV 307

Query: 121 VK 122
           + 
Sbjct: 308 LA 309

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 44.7 bits (104), Expect = 1e-05
 Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 2/64 (3%)

Query: 1   MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTV 59
              +G LL  G    N   +D    +D    +    + V  L  + +G  +A+GS ++ +
Sbjct: 278 FSKSGRLLLAGYDDFNCNVWDALK-ADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFL 336

Query: 60  KIWD 63
           KIW+
Sbjct: 337 KIWN 340

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 42.4 bits (98), Expect = 9e-05
 Identities = 29/201 (14%), Positives = 58/201 (28%), Gaps = 9/201 (4%)

Query: 244 ISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNG--NLLSCGT 301
           I  + W   +  L  + +    + +W       +  +      V+   +    N ++CG 
Sbjct: 58  IYAMHWGTDSRLLV-SASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGG 116

Query: 302 IGGNILHYDVRTH------SDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQ 355
           +      Y+++T       S      T        L  +         +     I   +Q
Sbjct: 117 LDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQ 176

Query: 356 LDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSP 415
                     V  L       +   G  D S K+W+       +    H+  I +    P
Sbjct: 177 TTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFP 236

Query: 416 DQTCVAAASADETISIWNCFP 436
           +    A  S D T  +++   
Sbjct: 237 NGNAFATGSDDATCRLFDLRA 257

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 71.4 bits (173), Expect = 4e-14
 Identities = 46/362 (12%), Positives = 96/362 (26%), Gaps = 78/362 (21%)

Query: 37  DVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKR---------------PQVNNQCHLS 81
            VVC +K+S +G YLA+G N T +++                           ++     
Sbjct: 63  SVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDL 122

Query: 82  AVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKR 141
            ++++ + P     LATG       +    +               + D   S  +    
Sbjct: 123 YIRSVCFSPDG-KFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVS- 180

Query: 142 RHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYT 201
                                 RTV           L   ++     +  +P        
Sbjct: 181 ------------------GSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAA 222

Query: 202 SGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYD----NAYISCVAWKPRTTDLA 257
             LD             +V  W+++T      ++            +  V +      + 
Sbjct: 223 GSLDR------------AVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVV 270

Query: 258 V-----------TNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGG 304
                               D               H   V+++    N   +  G+   
Sbjct: 271 SGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDR 330

Query: 305 NILHYDVRT---------HSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFR 354
            +L +D ++         H +   ++     V  G    P     A+GS +   +IW ++
Sbjct: 331 GVLFWDKKSGNPLLMLQGHRNSVISV----AVANGSSLGPEYNVFATGSGDCKARIWKYK 386

Query: 355 QL 356
           ++
Sbjct: 387 KI 388

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 63.7 bits (153), Expect = 2e-11
 Identities = 38/280 (13%), Positives = 87/280 (31%), Gaps = 28/280 (10%)

Query: 182 VKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDN 241
               PE +  + S  +D Y   + +                        ++++    ++ 
Sbjct: 105 ANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQ 164

Query: 242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGT 301
              S   +      ++ +   T  I      +  L   +   +  V     +G  ++ G+
Sbjct: 165 DIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGS 224

Query: 302 IGGNILHYDVRTHSDYPT------AITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFR 354
           +   +  +D  T            + T   D V  + ++ +G+ + SGS + +VK+W+ +
Sbjct: 225 LDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQ 284

Query: 355 QLDAKRPLGLIVPKLKREGRELVTSH---------------GKQDCSLKMWEYPRLHLIE 399
             + K                                    G +D  +  W+    + + 
Sbjct: 285 NANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLL 344

Query: 400 ELKIHQERILS------AVLSPDQTCVAAASADETISIWN 433
            L+ H+  ++S      + L P+    A  S D    IW 
Sbjct: 345 MLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWK 384

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 55.6 bits (132), Expect = 5e-09
 Identities = 25/127 (19%), Positives = 49/127 (38%), Gaps = 22/127 (17%)

Query: 2   CWNGNLLSCGTIGGNILHYDVRTHSD-----------YPTAITREGDVVCGLKWSPNGRY 50
             +G  +  G++  ++  ++++  ++                    D V  +  + N  Y
Sbjct: 263 TRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEY 322

Query: 51  LASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCP---WEP--TLLATGGGICD 104
           + SGS +  V  WD +      P +  Q H ++V ++A        P   + ATG G  D
Sbjct: 323 ILSGSKDRGVLFWDKKS---GNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSG--D 377

Query: 105 QTVRLWN 111
              R+W 
Sbjct: 378 CKARIWK 384

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 51.7 bits (122), Expect = 9e-08
 Identities = 36/262 (13%), Positives = 73/262 (27%), Gaps = 42/262 (16%)

Query: 212 LAVALDTSVYTWNTKTNKTQLLVEYPTYDN---------------AYISCVAWKPRTTDL 256
           LA   + +   +          +   +  N                YI  V + P    L
Sbjct: 77  LATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFL 136

Query: 257 AVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSD 316
           A             E  + ++              +          G   +         
Sbjct: 137 ATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQ 196

Query: 317 YPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLK----- 370
               ++ E  V        +G+Y+A+GS +  V++WD         L             
Sbjct: 197 CSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDS 256

Query: 371 -------REGRELVTSHGKQDCSLKMWEYPRLHLIEE------------LKIHQERILSA 411
                  R+G+ +V+  G  D S+K+W     +   +               H++ +LS 
Sbjct: 257 VYSVVFTRDGQSVVS--GSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSV 314

Query: 412 VLSPDQTCVAAASADETISIWN 433
             + +   + + S D  +  W+
Sbjct: 315 ATTQNDEYILSGSKDRGVLFWD 336

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 47.1 bits (110), Expect = 3e-06
 Identities = 24/138 (17%), Positives = 54/138 (39%), Gaps = 19/138 (13%)

Query: 1   MCWNGNLLSCGTIGGNILHYDVRTHSDYPT------AITREGDVVCGLKWSPNGRYLASG 54
              +G  ++ G++   +  +D  T            + T   D V  + ++ +G+ + SG
Sbjct: 213 SPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSG 272

Query: 55  S-NNTVKIWDFRQLDAKRPQ---------VNNQCHLSAVKAIAWCPWEPTLLATGGGICD 104
           S + +VK+W+ +  + K            V    H   V ++A    +  +L+      D
Sbjct: 273 SLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSK---D 329

Query: 105 QTVRLWNSMNGKEKCHVK 122
           + V  W+  +G     ++
Sbjct: 330 RGVLFWDKKSGNPLLMLQ 347

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 45.6 bits (106), Expect = 1e-05
 Identities = 24/110 (21%), Positives = 35/110 (31%), Gaps = 21/110 (19%)

Query: 326 DVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDC 385
            VVC +K+S +G YLA+G N T +++          L                       
Sbjct: 63  SVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARL---------------------SD 101

Query: 386 SLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCF 435
                + P              I S   SPD   +A  + D  I IW+  
Sbjct: 102 DSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIE 151

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 45.2 bits (105), Expect = 1e-05
 Identities = 13/74 (17%), Positives = 29/74 (39%), Gaps = 14/74 (18%)

Query: 4   NGNLLSCGTIGGNILHYDVRT---------HSDYPTAITREGDVVCGLKWSPNGRYLASG 54
           N   +  G+    +L +D ++         H +   ++     V  G    P     A+G
Sbjct: 319 NDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISV----AVANGSSLGPEYNVFATG 374

Query: 55  S-NNTVKIWDFRQL 67
           S +   +IW ++++
Sbjct: 375 SGDCKARIWKYKKI 388

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 69.1 bits (167), Expect = 2e-13
 Identities = 41/406 (10%), Positives = 99/406 (24%), Gaps = 65/406 (16%)

Query: 37  DVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTL 95
           + +    W+ +   +A    N+ V I++       +     + H   V  + W P +   
Sbjct: 8   EPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHE-LKEHNGQVTGVDWAP-DSNR 65

Query: 96  LATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDR 155
           + T G   D+   +W       K  +           + +   +K+  +        I  
Sbjct: 66  IVTCGT--DRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICY 123

Query: 156 KKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVA 215
            +  N         +                        I +   +           A +
Sbjct: 124 FEQENDWWVCKHIKKP-----------------------IRSTVLSLDWHPNSVLLAAGS 160

Query: 216 LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEER 275
            D     ++    +                            V                 
Sbjct: 161 CDFKCRIFSAYIKE----------------------------VEERPAPTPWGSKMPFGE 192

Query: 276 LIQKLRTHMHQV--IAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKW 333
           L+ +  +    V  +    NG+ ++  +    +   D        T  +    ++    +
Sbjct: 193 LMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAV-TF 251

Query: 334 SPNGRYLASGSNNTVKIWDFRQLDAK-RPLGLIVPKLKREGRELVTSHGKQDCSLKMWEY 392
                 +A+G +    ++ +     K    G +    +   R L      Q+   K    
Sbjct: 252 ITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSE 311

Query: 393 PRLHLIEELK-IHQERILSAVLSPD----QTCVAAASADETISIWN 433
                   L  +H+  +    +        +       D  +SIW+
Sbjct: 312 GSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWD 357

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 57.9 bits (138), Expect = 8e-10
 Identities = 38/367 (10%), Positives = 96/367 (26%), Gaps = 25/367 (6%)

Query: 1   MCWN--GNLLSCGTIGGNILHYDVRTHSDYPTAITRE-GDVVCGLKWSPNGRYLASGS-N 56
             WN     ++       +  Y+   +        +E    V G+ W+P+   + +   +
Sbjct: 13  HAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTD 72

Query: 57  NTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGK 116
               +W  +    K   V  + +    +A     W P       G   + + +       
Sbjct: 73  RNAYVWTLKGRTWKPTLVILRIN----RAARCVRWAPNEKKFAVGSGSRVISICYFEQEN 128

Query: 117 EKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLG 176
           +    K   +      +S         L+     F+    ++ +   + V          
Sbjct: 129 DWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKC---RIFSAYIKEVEERPAPTP-- 183

Query: 177 KLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEY 236
                     E + E+ S     +             V+ D++V   +            
Sbjct: 184 --WGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAV---AT 238

Query: 237 PTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNL 296
              +   +  V +   ++ +A  + C   +  +     +L    R  + +  +       
Sbjct: 239 LASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTAR 298

Query: 297 LSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRY----LASGSN-NTVKIW 351
                +                   +   + V  +     G+       +      + IW
Sbjct: 299 ERFQNLDKKASSEGSAAAGAG--LDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIW 356

Query: 352 DFRQLDA 358
           D R L++
Sbjct: 357 DVRSLES 363

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 46.4 bits (108), Expect = 5e-06
 Identities = 16/116 (13%), Positives = 30/116 (25%), Gaps = 38/116 (32%)

Query: 326 DVVCGLKWSPNGRYLASGSNN-TVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQD 384
           + +    W+ +   +A   NN  V I++                                
Sbjct: 8   EPISCHAWNKDRTQIAICPNNHEVHIYE-------------------------------- 35

Query: 385 CSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKK 440
                    +   + ELK H  ++     +PD   +     D    +W    R  K
Sbjct: 36  -----KSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWK 86

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 65.7 bits (158), Expect = 2e-12
 Identities = 34/328 (10%), Positives = 71/328 (21%), Gaps = 26/328 (7%)

Query: 26  SDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKA 85
           + +P+           L  +P G  +   +  +V       + +         H      
Sbjct: 7   ALFPSLPRTARGTAVVLGNTPAGDKIQYCNGTSVYTVP---VGSLTDTEIYTEHSHQTTV 63

Query: 86  IAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLS 145
               P      A+G       VR+W++                  + IS+  + KR    
Sbjct: 64  AKTSPSGY-YCASGD--VHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAV 120

Query: 146 FLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLD 205
                           +       Q              +    ++          SG D
Sbjct: 121 GEGRERFGHVFLFDTGTSNGNLTGQA-------------RAMNSVDFKPSRPFRIISGSD 167

Query: 206 WGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEY 265
                           T+   T     +   P       +         +         +
Sbjct: 168 DNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVF 227

Query: 266 IDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREG 325
            D   +          +     +    +G  ++  +    I  ++V T     T      
Sbjct: 228 EDDSLKNVA------HSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTR 281

Query: 326 DVVCGLKWSPNGRYLASGS-NNTVKIWD 352
                L      + L S S N  +   +
Sbjct: 282 IEDQQLGIIWTKQALVSISANGFINFVN 309

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 43.0 bits (99), Expect = 5e-05
 Identities = 20/90 (22%), Positives = 30/90 (33%), Gaps = 6/90 (6%)

Query: 23  RTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLS 81
               D           V GL WSP+G  +AS S + T+KIW+   L  ++          
Sbjct: 225 GVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIED 284

Query: 82  AVKAIAWCPWEPTLLATGGGICDQTVRLWN 111
               I W       L +     +  +   N
Sbjct: 285 QQLGIIWT---KQALVSISA--NGFINFVN 309

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 37.6 bits (85), Expect = 0.003
 Identities = 10/64 (15%), Positives = 19/64 (29%), Gaps = 1/64 (1%)

Query: 1   MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTV 59
              +G  ++  +    I  ++V T     T           L      + L S S N  +
Sbjct: 246 WSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFI 305

Query: 60  KIWD 63
              +
Sbjct: 306 NFVN 309

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 64.1 bits (154), Expect = 8e-12
 Identities = 42/399 (10%), Positives = 101/399 (25%), Gaps = 61/399 (15%)

Query: 35  EGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEP 93
              V+  L       Y+ +G+ +  ++++D      K+  +    H   V A+ +     
Sbjct: 12  MTSVITCL--QFEDNYVITGADDKMIRVYD---SINKKFLLQLSGHDGGVWALKYAH--G 64

Query: 94  TLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEI 153
            +L +G       V                 + +         +  + +++ +++ G   
Sbjct: 65  GILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVR-------CLDIVEYKNIKYIVTGSRD 117

Query: 154 DRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLA 213
           +   V    K +  P         L      +    +           +    G      
Sbjct: 118 NTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSG 177

Query: 214 VALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE 273
              D ++  W+    K   ++   T           + R    ++  T   +     E  
Sbjct: 178 SY-DNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELM 236

Query: 274 ERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKW 333
             L           ++  +  +  + G+            +           ++     +
Sbjct: 237 YTLQGHTALVGLLRLSDKFLVSAAADGS------IRGWDANDYSRKFSYHHTNLSAITTF 290

Query: 334 SPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYP 393
             +   L SGS N   I++                  R G+ +  +              
Sbjct: 291 YVSDNILVSGSENQFNIYNL-----------------RSGKLVHAN-------------- 319

Query: 394 RLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIW 432
                  +    ++I S       T VAA   D    + 
Sbjct: 320 -------ILKDADQIWSVNFKGK-TLVAAVEKDGQSFLE 350

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 57.2 bits (136), Expect = 2e-09
 Identities = 37/353 (10%), Positives = 83/353 (23%), Gaps = 19/353 (5%)

Query: 1   MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVK 60
           + +  N +  G     I  YD      +   ++     V  LK++  G  L SGS +   
Sbjct: 19  LQFEDNYVITGADDKMIRVYDSINKK-FLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTV 76

Query: 61  IWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCH 120
                +                   I        ++       D T+ +W          
Sbjct: 77  RVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGS---RDNTLHVWKLPKESSVPD 133

Query: 121 VKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPR 180
              +                        + + +   +    S RTVS    +   G    
Sbjct: 134 HGEEHDYPLVFHTPEE------------NPYFVGVLRGHMASVRTVSGHGNIVVSGSYDN 181

Query: 181 KVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYD 240
            +       ++   I++          Y         ++      +    +      T  
Sbjct: 182 TLIVWDVAQMKCLYILSGHTDRIYSTIYDHE-RKRCISASMDTTIRIWDLENGELMYTLQ 240

Query: 241 NAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCG 300
                    +     L                  R      T++  +     + N+L  G
Sbjct: 241 GHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSG 300

Query: 301 TIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDF 353
           +       Y++R+       I ++ D +  + +       A   +    +   
Sbjct: 301 S-ENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKTLVAAVEKDGQSFLEIL 352

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 63.7 bits (153), Expect = 2e-11
 Identities = 44/347 (12%), Positives = 89/347 (25%), Gaps = 44/347 (12%)

Query: 45  SPNGRYLASGSN-NTVKIWDFRQLDAKRPQVNNQC---------HLSAVKAIAWCPWEPT 94
           S    +  S S    +K+WD + LD + P+  +           H+  ++AI    +E  
Sbjct: 21  SACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELC 80

Query: 95  LLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEID 154
           L+AT        +  +      E   V  +     D  +    +     L +      + 
Sbjct: 81  LVATTS--FSGDLLFYRITREDETKKVIFEKLDLLDSDMK---KHSFWALKWGASNDRLL 135

Query: 155 RKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSG-----LDWGYH 209
             +++    +  +              +       LE    +    T       +D    
Sbjct: 136 SHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISER 195

Query: 210 DTLAVA-LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCV--------------------A 248
             +A    + +V      T +     E         + +                     
Sbjct: 196 GLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSF 255

Query: 249 WKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILH 308
                 +              H  +  L +   +     ++   +G  L      G +  
Sbjct: 256 GCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRF 315

Query: 309 YDVRTHSDYPTAITREGDV---VCGLKWSPNGRYLASGSNNTVKIWD 352
           +DV+T     T      D+      L    +G  LA      VK   
Sbjct: 316 WDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLK 362

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 58.8 bits (140), Expect = 3e-10
 Identities = 30/319 (9%), Positives = 79/319 (24%), Gaps = 38/319 (11%)

Query: 37  DVVCGLKWSPNGRYLASGSN-NTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTL 95
             +  L  S +G+ L S      +  WD         +V    H + +  I         
Sbjct: 13  KAITALSSSADGKTLFSADAEGHINSWDIS--TGISNRVFPDVHATMITGIKTTSKGD-- 68

Query: 96  LATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDR 155
                   D  +++  +            ++ ++              ++       I  
Sbjct: 69  --LFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYS 126

Query: 156 KKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVA 215
              L +   + + +                                   D  +       
Sbjct: 127 HGKLTEVPISYNSSC-----------------------------VALSNDKQFVAVGGQD 157

Query: 216 LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEER 275
               VY  +  +      + +P    +                       +    E    
Sbjct: 158 SKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHT 217

Query: 276 LIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREG--DVVCGLKW 333
                 T     ++   +   L+ G++  +++ +++   SD+P  I        V  + W
Sbjct: 218 NSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIW 277

Query: 334 SPNGRYLASGSNNTVKIWD 352
                 +++G ++ +K W+
Sbjct: 278 LNETTIVSAGQDSNIKFWN 296

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 43.1 bits (99), Expect = 4e-05
 Identities = 40/356 (11%), Positives = 88/356 (24%), Gaps = 71/356 (19%)

Query: 79  HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQ 138
           H  A+ A++    +   L +     +  +  W+   G     V  D        I    +
Sbjct: 11  HNKAITALSSSA-DGKTLFSADA--EGHINSWDISTGISN-RVFPDVHATMITGIKTTSK 66

Query: 139 KKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIIND 198
                +S+  H   +                                   +  + ++ N 
Sbjct: 67  GDLFTVSWDDHLKVVPAGG-----------------------------SGVDSSKAVANK 97

Query: 199 FYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAV 258
             +  L         +A+          ++     V      +        +        
Sbjct: 98  LSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQD 157

Query: 259 TNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYP 318
           +      +      E + I           +      + +  +               + 
Sbjct: 158 SKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHT 217

Query: 319 TAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELV 377
            + T     V  + WSP+   LA+GS +N+V +W+  +                      
Sbjct: 218 NSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNK---------------------- 255

Query: 378 TSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWN 433
                          P  H I     H    +++V+  ++T + +A  D  I  WN
Sbjct: 256 ---------------PSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWN 296

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 41.5 bits (95), Expect = 1e-04
 Identities = 20/112 (17%), Positives = 42/112 (37%), Gaps = 5/112 (4%)

Query: 1   MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTV 59
                 + +  +               +  + T     V  + WSP+   LA+GS +N+V
Sbjct: 189 NNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSV 248

Query: 60  KIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWN 111
            +W+  +       +     +S+V ++ W     T + + G   D  ++ WN
Sbjct: 249 IVWNMNKPSDHPIIIKGAHAMSSVNSVIWLN--ETTIVSAGQ--DSNIKFWN 296

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 58.8 bits (140), Expect = 4e-10
 Identities = 38/330 (11%), Positives = 87/330 (26%), Gaps = 22/330 (6%)

Query: 29  PTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVN--NQCHLSAVKAI 86
           P   T+       L + P    +A     +  +      D+K P V        S V  +
Sbjct: 11  PQPSTQRNFTTH-LSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTV 69

Query: 87  AWCPWEP-TLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLS 145
            + P +    L +G       V +W     KE   V+ + +                 +S
Sbjct: 70  KFSPIKGSQYLCSGD--ESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGP-----ISDIS 122

Query: 146 FLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLD 205
           +   G  +        +           +LG++    +      L+    +         
Sbjct: 123 WDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDG 182

Query: 206 WGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEY 265
                       ++    + K       VE+      ++  V    + +     +     
Sbjct: 183 SVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLK 242

Query: 266 IDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHS---DYPTAIT 322
                ++                    +    +       I  +DV T      +     
Sbjct: 243 YIEDDQE--------PVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQ 294

Query: 323 REGDVVCGLKWSPNGRYLASGSNNTVKIWD 352
           + G+   G+  + NGR ++   + T+  ++
Sbjct: 295 QLGNQQVGVVATGNGRIISLSLDGTLNFYE 324

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.7 bits (88), Expect = 0.001
 Identities = 19/212 (8%), Positives = 64/212 (30%), Gaps = 21/212 (9%)

Query: 241 NAYISCVAWKPRTTDLAVTNTCTEYI-----DLWHEQEERLIQKLRTHMHQVIAMCWNGN 295
              IS ++W      L V     +                +    +      +       
Sbjct: 115 AGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMR 174

Query: 296 LLSCGTIGGNILHYDVRT-----------HSDYPTAITREGDVVCGLKWSPNGRYLASGS 344
            ++ G  G  + +                   +   +    D    +    + R ++   
Sbjct: 175 SMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFD 234

Query: 345 NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIH 404
             + +   + + D +   G I      + ++  T     D ++++W+      +++  + 
Sbjct: 235 GKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGA--DATIRVWDVTTSKCVQKWTLD 292

Query: 405 QERILS---AVLSPDQTCVAAASADETISIWN 433
           ++++ +    V++     + + S D T++ + 
Sbjct: 293 KQQLGNQQVGVVATGNGRIISLSLDGTLNFYE 324

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.7 bits (88), Expect = 0.001
 Identities = 7/112 (6%), Positives = 24/112 (21%), Gaps = 4/112 (3%)

Query: 1   MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTV 59
                 +        +           Y                  + +  A+   + T+
Sbjct: 216 DSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATI 275

Query: 60  KIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWN 111
           ++WD       + +          + +         + +     D T+  + 
Sbjct: 276 RVWDVTTSKCVQ-KWTLDKQQLGNQQVGVVATGNGRIISLSL--DGTLNFYE 324

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.2 bits (136), Expect = 1e-09
 Identities = 40/296 (13%), Positives = 90/296 (30%), Gaps = 31/296 (10%)

Query: 77  QCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVK-----TDSQQANDE 131
            C     K +    ++   + +G    D T+++W+    + K  +          Q ++ 
Sbjct: 9   HCRSETSKGVYCLQYDDQKIVSGLR--DNTIKIWDKNTLECKRILTGHTGSVLCLQYDER 66

Query: 132 TISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILE 191
            I          +  +  G  ++      ++   +     +       R +         
Sbjct: 67  VIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPT 126

Query: 192 APSIINDFYTSG-----LDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISC 246
             ++             +D+     ++ + D ++  WNT T +           N +   
Sbjct: 127 DITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFV------RTLNGHKRG 180

Query: 247 VAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNI 306
           +A       L V+ +    I LW  +    ++ L  H   V  + ++   +  G   G I
Sbjct: 181 IACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKI 240

Query: 307 LHYDVRTHSDYPTAITR---------EGDVVCGLKWSPNGRYLASGSN-NTVKIWD 352
             +D+    D                 G V        +   + S S+ +T+ IWD
Sbjct: 241 KVWDLVAALDPRAPAGTLCLRTLVEHSGRVFR---LQFDEFQIVSSSHDDTILIWD 293

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.8 bits (122), Expect = 7e-08
 Identities = 34/178 (19%), Positives = 60/178 (33%), Gaps = 16/178 (8%)

Query: 267 DLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGD 326
           D+    +  L + L  H   V  + ++   +   +    I  ++  T        T  G 
Sbjct: 121 DMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCE---FVRTLNGH 177

Query: 327 VVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKR-PLGLIVPKLKREGRELVTSHGKQD 384
                      R + SGS +NT+++WD       R   G                 G  D
Sbjct: 178 KRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYD 237

Query: 385 CSLKMWEYPR---------LHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWN 433
             +K+W+               +  L  H  R+    L  D+  + ++S D+TI IW+
Sbjct: 238 GKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFR--LQFDEFQIVSSSHDDTILIWD 293

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.3 bits (113), Expect = 7e-07
 Identities = 16/117 (13%), Positives = 39/117 (33%), Gaps = 13/117 (11%)

Query: 1   MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVK 60
           + +   L+  G+    I  +D+   +     +    + +       N R ++   +  +K
Sbjct: 184 LQYRDRLVVSGSSDNTIRLWDIECGA--CLRVLEGHEELVRCIRFDNKRIVSGAYDGKIK 241

Query: 61  IWDFRQLDAKRPQVNNQC------HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWN 111
           +WD       R      C      H   V  +    ++   + +     D T+ +W+
Sbjct: 242 VWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQ---FDEFQIVSSSH--DDTILIWD 293

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 56.3 bits (134), Expect = 3e-09
 Identities = 30/326 (9%), Positives = 71/326 (21%), Gaps = 21/326 (6%)

Query: 41  GLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRP-QVNNQCHLSAVKAIAWCPWEPTLLAT 98
           G        Y+   +  N + + D   + +    +                P   T    
Sbjct: 1   GPALKAGHEYMIVTNYPNNLHVVD---VASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVL 57

Query: 99  GGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYR--EQKKRRHLSFLLHGFEIDRK 156
                   +   +    K   H    S         Y        + +   ++  +    
Sbjct: 58  NNH--YGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLND 115

Query: 157 KVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVAL 216
             + +  R    +       K  R      +  L   +     Y +G D    D      
Sbjct: 116 HYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKY 175

Query: 217 DTSVYTWN-------TKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLW 269
             ++   N                 + P ++ + +  +A          T          
Sbjct: 176 TVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSV 235

Query: 270 HEQEERLIQKLRT-HMHQVIAMCWNGNLLSCGTIGGNILH-YDVRTHSDYPTAITREGDV 327
             +  +   +              +    +      N L  YD++               
Sbjct: 236 DLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRK--LIKAANLDHT 293

Query: 328 VCGLKWSPNGRYLASGS-NNTVKIWD 352
              + +   G  L  G   N + +++
Sbjct: 294 YYCVAFDKKGDKLYLGGTFNDLAVFN 319

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 56.4 bits (134), Expect = 3e-09
 Identities = 32/345 (9%), Positives = 86/345 (24%), Gaps = 46/345 (13%)

Query: 44  WSP-NGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGI 102
           +SP +G  +A  S     I D       +           ++ +     +  +    G  
Sbjct: 10  FSPLDGDLIAFVSRGQAFIQDVSGTYVLKVP-----EPLRIRYVRRGG-DTKVAFIHGTR 63

Query: 103 CDQTVRLWNSMNGKEK---------------------CHVKTDSQQANDETISYREQKKR 141
               + +++   GK +                            +    +  + +     
Sbjct: 64  EGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIE 123

Query: 142 RHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYT 201
           R    ++  F I            +   +    + +       +  +I  A +  +  Y 
Sbjct: 124 RSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYA 183

Query: 202 SGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTY----DNAYISCVAWKPRTTDLA 257
              D    +   ++  +   + +         V    +         +     PR+    
Sbjct: 184 PAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSE 243

Query: 258 VTNTCTEYIDLWHEQ------EERLIQKLRTHMHQVIAMCWN--GNLLSCGTIGGNILHY 309
                   +            + R+I  L + +                     G +L Y
Sbjct: 244 AGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKY 303

Query: 310 DVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDF 353
           DV+T       +T   + +  L+ S + + +     +  +  +  
Sbjct: 304 DVKTRK-----VTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPL 343

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 52.2 bits (123), Expect = 7e-08
 Identities = 19/230 (8%), Positives = 42/230 (18%), Gaps = 21/230 (9%)

Query: 221 YTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKL 280
                     + ++   T  +         P                   E  +      
Sbjct: 117 GKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATT 176

Query: 281 RTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRT------HSDYPTAITREGDVVCGLKWS 334
                   A   +   L   +        D             P  I          K  
Sbjct: 177 ENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLV 236

Query: 335 PNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSH-----------GKQ 383
           P      +G  +   ++         P    +         + +               +
Sbjct: 237 PRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPE 296

Query: 384 DCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWN 433
              L  ++        ++   +  +    LS D+  V     D  I  + 
Sbjct: 297 KGVLLKYDVKT----RKVTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFP 342

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 38.3 bits (87), Expect = 0.002
 Identities = 6/87 (6%), Positives = 20/87 (22%), Gaps = 11/87 (12%)

Query: 39  VCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLA 97
                      Y         +  +D +               + +  +     +   + 
Sbjct: 279 YSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTE-------VKNNLTDLRLSA-DRKTVM 330

Query: 98  TGGGICDQTVRLWNSMNGKEKCHVKTD 124
                 D  +  +     +++  V+TD
Sbjct: 331 VRKD--DGKIYTFPLEKPEDERTVETD 355

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 55.4 bits (131), Expect = 4e-09
 Identities = 42/286 (14%), Positives = 90/286 (31%), Gaps = 24/286 (8%)

Query: 79  HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQ 138
           H   + A+   P     L +G    D  +  W+S +  +       S        S  ++
Sbjct: 12  HNKGITALTVNP-----LISGS--YDGRIMEWSSSSMHQD-----HSNLIVSLDNSKAQE 59

Query: 139 KKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIIND 198
                    L    I + +  +Q K   +       +      +        +    +  
Sbjct: 60  YSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRL 119

Query: 199 FYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAV 258
                      + +AV L+        K +  ++  +  T   A  S ++  P  T +A 
Sbjct: 120 NSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAA 179

Query: 259 TNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW------------NGNLLSCGTIGGNI 306
            +   + +    +  E    +      ++ A+ W              +L++ G++  NI
Sbjct: 180 GDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNI 239

Query: 307 LHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWD 352
             Y V+       A+    D V  L W      ++SG++  +K W+
Sbjct: 240 FIYSVKRPMKIIKALNAHKDGVNNLLWETPSTLVSSGADACIKRWN 285

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 44.2 bits (102), Expect = 2e-05
 Identities = 15/62 (24%), Positives = 28/62 (45%)

Query: 2   CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKI 61
               +L++ G++  NI  Y V+       A+    D V  L W      ++SG++  +K 
Sbjct: 224 EIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPSTLVSSGADACIKR 283

Query: 62  WD 63
           W+
Sbjct: 284 WN 285

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

 Score = 47.1 bits (111), Expect = 3e-06
 Identities = 29/280 (10%), Positives = 66/280 (23%), Gaps = 29/280 (10%)

Query: 210 DTLAVA-LDTSVYTWNTKTNKTQLLVEYPTYDNAY--ISCVAWKPRTTDLAVTNTCTEYI 266
             L V   D  V   +    +   + E      A    +                     
Sbjct: 74  RYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQY 133

Query: 267 DLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIG--------------GNILHYDVR 312
            +   +     +   T         ++        +               G IL  D  
Sbjct: 134 VIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYT 193

Query: 313 THSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKI----WDFRQLDAKRPLGLIVPK 368
             ++  T        +       + RY  + +N   K+        +L A    G   P 
Sbjct: 194 DLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPH 253

Query: 369 LKREGRELVTSHGKQDCSLKMWEYPRLHLI----EELKIHQERILSAVLSPDQTCVAAAS 424
             R    +  + G    +  M +   + LI    E    +  +IL +  +     +   +
Sbjct: 254 PGRGANFVHPTFGPVWATSHMGD-DSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKT 312

Query: 425 ADETISIWNCFPRDKKRKARQ---VGSGSSLEFAILKQPV 461
              +  ++     + + +      V    ++         
Sbjct: 313 HPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEF 352

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 44.4 bits (103), Expect = 2e-05
 Identities = 32/353 (9%), Positives = 86/353 (24%), Gaps = 53/353 (15%)

Query: 6   NLLSCGTIGGNILHYDVRTHSDYPT-AITREGDVVCGLKWSPNGRYL--ASGSNNTVKIW 62
           + +        ++  D    +      I   G        +P GR        + ++   
Sbjct: 2   DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKI 61

Query: 63  DFR--QLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCH 120
           D    +   +      +  + ++   A  P   TL      I +  VRL  +    +   
Sbjct: 62  DLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLA-----IYESPVRLELTHFEVQPTR 116

Query: 121 VKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPR 180
           V     +      ++   ++   L++                                  
Sbjct: 117 VALYDAETLSRRKAFEAPRQITMLAW---------------------------------- 142

Query: 181 KVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYD 240
              A+    L       D +    + G        + +       + +   +  ++ +  
Sbjct: 143 ---ARDGSKLYGLG--RDLHVMDPEAGTL-VEDKPIQSWEAETYAQPDVLAVWNQHESSG 196

Query: 241 NAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCG 300
                    +        T   T  + +  E  E  ++++R       +   N       
Sbjct: 197 VMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAF 256

Query: 301 TIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWD 352
                +  +D+  ++               +  S +G  +  G     +  +D
Sbjct: 257 GAYNVLESFDLEKNA--SIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYD 307

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 42.5 bits (98), Expect = 8e-05
 Identities = 23/245 (9%), Positives = 57/245 (23%), Gaps = 19/245 (7%)

Query: 207 GYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYI 266
                L +       T     +   L           I+ +AW    + L        ++
Sbjct: 100 ESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLG-RDLHV 158

Query: 267 DLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGD 326
                      + +++   +  A      + +     G +         D   A      
Sbjct: 159 MDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYR 218

Query: 327 VVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCS 386
                     G             +    ++  +                          
Sbjct: 219 TGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTR-----------------AFGAYNV 261

Query: 387 LKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKARQV 446
           L+ ++  +   I+ +        S  +S D + V    A   ++ ++    +KK +    
Sbjct: 262 LESFDLEKNASIKRVP-LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLP 320

Query: 447 GSGSS 451
           G+ S 
Sbjct: 321 GNASM 325

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 44.0 bits (102), Expect = 3e-05
 Identities = 32/330 (9%), Positives = 70/330 (21%), Gaps = 69/330 (20%)

Query: 41  GLKWSPNGRYLASGSN-----------NTVKIWDFRQLDAKRPQVNNQCHLSAV----KA 85
               + +G ++A  S            + V+++D   L               V      
Sbjct: 51  NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWM 110

Query: 86  IAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLS 145
            +  P   TLL          V + +      K  +                        
Sbjct: 111 TSLTPDGKTLLFYQFS-PAPAVGVVDLEGKAFKRMLDVPDC------YHIFPTAPDTFFM 163

Query: 146 FLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLD 205
               G                   +        P     +     +   I +  Y+    
Sbjct: 164 HCRDGSLA----------------KVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAG 207

Query: 206 WGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEY 265
                T        ++  +  +   + L        A  +          +A        
Sbjct: 208 RLVWPT----YTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYH------ 257

Query: 266 IDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREG 325
                             + ++  +    +     T    ++  D +T      A    G
Sbjct: 258 ----------------RALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGE--RLAKFEMG 299

Query: 326 DVVCGLKWSPNGRYL---ASGSNNTVKIWD 352
             +  +  S + + L    S  + T+ I D
Sbjct: 300 HEIDSINVSQDEKPLLYALSTGDKTLYIHD 329

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 37.8 bits (86), Expect = 0.002
 Identities = 29/284 (10%), Positives = 60/284 (21%), Gaps = 42/284 (14%)

Query: 205 DWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNA----YISCVAWKPRTTDLAVTN 260
              +           V  ++  T      +E P         Y    +  P    L    
Sbjct: 65  STVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQ 124

Query: 261 TCTEYIDLWHEQEE-RLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNIL----HYDVRTHS 315
                     + E     + L       I              G               +
Sbjct: 125 FSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEIT 184

Query: 316 DYPTAITREGDVVCGLKWSPNGRYLASGSNN----------------------------T 347
                   +  ++    +S     L   +                               
Sbjct: 185 HTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERAD 244

Query: 348 VKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQER 407
                  Q  A       +  L  +  E           + + +      + + +     
Sbjct: 245 GWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTA--SRFVVVLDAKTGERLAKFE-MGHE 301

Query: 408 ILSAVLSPDQTC--VAAASADETISIWNCFPRDKKRKARQVGSG 449
           I S  +S D+     A ++ D+T+ I +    ++ R   Q+G G
Sbjct: 302 IDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHG 345

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Length = 333

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

 Score = 43.3 bits (100), Expect = 4e-05
 Identities = 28/312 (8%), Positives = 67/312 (21%), Gaps = 21/312 (6%)

Query: 50  YLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRL 109
           Y+AS  +  + +W+    +              V+ +   P +  L        +  V  
Sbjct: 7   YIASPESQQIHVWNLNH-EGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRP--EFRVLA 63

Query: 110 WNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPT 169
           +             +S      T          H+S    G  +        +       
Sbjct: 64  YRIAPDDGALTFAAESALPGSLT----------HISTDHQGQFVFVGSYNAGNVSVTRLE 113

Query: 170 QFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYH------DTLAVALDTSVYTW 223
             L        +          +P     +  +             D   VA D +  T 
Sbjct: 114 DGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTT 173

Query: 224 NTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTH 283
                   ++          ++ +       +L   +   E +       E         
Sbjct: 174 VEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAA 233

Query: 284 MHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYL--A 341
              +     +            +                       G     +G+YL  A
Sbjct: 234 DIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAA 293

Query: 342 SGSNNTVKIWDF 353
              ++ + +++ 
Sbjct: 294 GQKSHHISVYEI 305

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 41.5 bits (96), Expect = 2e-04
 Identities = 36/283 (12%), Positives = 71/283 (25%), Gaps = 41/283 (14%)

Query: 211 TLAVA-LDTSVYTWNTKTNKTQLLVEYPTYDNAY--ISCVAWKPRTTDLAVTNTCTEYID 267
            L V   D  +   +    +   + E      A    S                      
Sbjct: 75  YLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFA 134

Query: 268 LWHEQEERLIQKLRTHMHQV-------------IAMCWNGNLLSCGTIG-GNILHYDVRT 313
           +   +     Q + T    V             I                G +L  + + 
Sbjct: 135 IMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKD 194

Query: 314 HSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREG 373
             +           +    W  + RY  + +NN+ K+      D +    + V K    G
Sbjct: 195 IDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPG 254

Query: 374 REL-----------VTSHGKQDCSLKMWEYPRLH------LIEELKIHQERILSAVLSPD 416
           R              TSH        +   P+ H       + EL+      L     P 
Sbjct: 255 RGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPK 314

Query: 417 QTCVAA-------ASADETISIWNCFPRDKKRKARQVGSGSSL 452
            + +         A   +++++++    D K +   +   + L
Sbjct: 315 SSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADL 357

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

 Score = 39.5 bits (90), Expect = 6e-04
 Identities = 29/305 (9%), Positives = 66/305 (21%), Gaps = 39/305 (12%)

Query: 50  YLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRL 109
           Y+A+  ++ + + D                 S        P    +           V +
Sbjct: 5   YIANSESDNISVIDV----TSNKVTATIPVGSNPMGAVISPDGTKVYVANAH--SNDVSI 58

Query: 110 WNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPT 169
            ++        V   S           +Q    +++             +  + +T    
Sbjct: 59  IDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSP 118

Query: 170 QFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNK 229
             L                                       L V  +         T  
Sbjct: 119 LGLA-------------------------------LSPDGKKLYVTNNGDKTVSVINTVT 147

Query: 230 TQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIA 289
             ++       +     V        +A  ++ +  +            K+      +  
Sbjct: 148 KAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAV 207

Query: 290 MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYL--ASGSNNT 347
                                + T ++  TA    G    G+  +P+G+ +  A    NT
Sbjct: 208 NPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFCNT 267

Query: 348 VKIWD 352
           V + D
Sbjct: 268 VSVID 272

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 38.4 bits (88), Expect = 0.001
 Identities = 15/150 (10%), Positives = 34/150 (22%), Gaps = 14/150 (9%)

Query: 217 DTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWH----EQ 272
                        T           A    +      + +   +       +       +
Sbjct: 194 AAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNE 253

Query: 273 EERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYD-------VRTHSDYPTAITREG 325
             R     R+   Q++A   N + +   T+  +            V       +     G
Sbjct: 254 SGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNG 313

Query: 326 DVVCGLKWSPNGR---YLASGSNNTVKIWD 352
                +  + +G    Y  S     + I+D
Sbjct: 314 HDSDAIIAAQDGASDNYANSAGTEVLDIYD 343

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	488
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	100.0
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	100.0
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	100.0
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	100.0
d1tbga_	340	beta1-subunit of the signal-transducing G protein	100.0
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	100.0
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	100.0
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	100.0
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	100.0
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	100.0
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	100.0
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	100.0
d1tbga_	340	beta1-subunit of the signal-transducing G protein	100.0
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	100.0
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	100.0
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	100.0
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	100.0
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	100.0
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	100.0
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.98
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.97
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	99.97
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.97
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.96
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.96
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.96
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.95
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.95
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.94
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.94
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.91
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.91
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.91
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.89
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.88
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.88
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.85
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.78
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.78
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.77
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.75
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	99.73
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.67
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.62
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	99.6
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	99.39
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	99.39
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	99.33
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	99.32
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	99.2
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	99.16
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	99.15
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	99.12
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	99.09
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	98.96
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	98.96
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	98.92
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	98.88
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	98.87
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	98.85
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	98.83
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	98.81
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	98.74
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	98.57
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	98.52
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	98.26
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	98.24
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	98.2
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	98.11
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	98.05
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	97.99
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	97.86
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	97.8
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	97.77
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	97.76
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	97.72
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	97.66
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	97.64
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	97.63
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	97.61
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	97.39
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	97.28
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	97.26
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	97.07
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	96.95
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	96.3
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	96.17
d1h6la_	353	Thermostable phytase (3-phytase) {Bacillus amyloli	95.52
d1zgka1	288	Kelch-like ECH-associated protein 1, KEAP1 {Human	94.91
d1v04a_	340	Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory	94.57
d1xipa_	381	Nucleoporin NUP159 {Baker's yeast (Saccharomyces c	93.41
d1xipa_	381	Nucleoporin NUP159 {Baker's yeast (Saccharomyces c	93.12
d1v04a_	340	Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory	93.12
d2hu7a1	313	Acylamino-acid-releasing enzyme, N-terminal donain	92.8
d1h6la_	353	Thermostable phytase (3-phytase) {Bacillus amyloli	87.86
d2hu7a1	313	Acylamino-acid-releasing enzyme, N-terminal donain	83.97

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.1e-42  Score=306.05  Aligned_cols=278  Identities=19%  Similarity=0.320  Sum_probs=233.8

Q ss_pred             ccCceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCcc--cccccccceeEEEEecCCCeEEeeeCCcccceEEEEe
Q psy14511         34 REGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQV--NNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWN  111 (488)
Q Consensus        34 ~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~--~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd  111 (488)
                      +|...|++++|+|+|++||+|+|+.|+|||+.+......+.  ...+|.+.|.+++|+|++++|++++.   |++|++||
T Consensus        49 ~H~~~V~~v~fs~~g~~latg~dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~---dg~i~iwd  125 (337)
T d1gxra_          49 NHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGE---ASTLSIWD  125 (337)
T ss_dssp             CCSSCCCEEEECSSSSEEEEECBSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEES---SSEEEEEE
T ss_pred             CCCCcEEEEEECCCCCEEEEEECCEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcCCCCEEEEeec---cccccccc
Confidence            79999999999999999999999999999998765444333  24578999999999999998877776   99999999


Q ss_pred             cCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeec
Q psy14511        112 SMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILE  191 (488)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (488)
                      +......                                                                         
T Consensus       126 ~~~~~~~-------------------------------------------------------------------------  132 (337)
T d1gxra_         126 LAAPTPR-------------------------------------------------------------------------  132 (337)
T ss_dssp             CCCC--E-------------------------------------------------------------------------
T ss_pred             ccccccc-------------------------------------------------------------------------
Confidence            8643311                                                                         


Q ss_pred             CCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEEC
Q psy14511        192 APSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHE  271 (488)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~  271 (488)
                                                            .  ...+.. +...+.+++|+|++..++++ +.++.+++|++
T Consensus       133 --------------------------------------~--~~~~~~-~~~~v~~~~~~~~~~~l~s~-~~d~~i~~~~~  170 (337)
T d1gxra_         133 --------------------------------------I--KAELTS-SAPACYALAISPDSKVCFSC-CSDGNIAVWDL  170 (337)
T ss_dssp             --------------------------------------E--EEEEEC-SSSCEEEEEECTTSSEEEEE-ETTSCEEEEET
T ss_pred             --------------------------------------c--cccccc-cccccccccccccccccccc-ccccccccccc
Confidence                                                  0  111112 67789999999999999998 99999999999


Q ss_pred             CcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeE
Q psy14511        272 QEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTV  348 (488)
Q Consensus       272 ~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i  348 (488)
                      .+++.......|...+.++++  ++..+++++.|+.+++||+++++ .. ....|...|.+++|+|++++|++++ |+.+
T Consensus       171 ~~~~~~~~~~~~~~~v~~l~~s~~~~~~~~~~~d~~v~i~d~~~~~-~~-~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i  248 (337)
T d1gxra_         171 HNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGR-QL-QQHDFTSQIFSLGYCPTGEWLAVGMESSNV  248 (337)
T ss_dssp             TTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE-EE-EEEECSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccce-ee-cccccccceEEEEEcccccccceecccccc
Confidence            999999999999999999999  68899999999999999998864 33 3345778899999999999999998 5999


Q ss_pred             EEEECCCCCCCcccce----eeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEe
Q psy14511        349 KIWDFRQLDAKRPLGL----IVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAAS  424 (488)
Q Consensus       349 ~iwd~~~~~~~~~~~~----~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~  424 (488)
                      ++||+++.+.......    ...+|+|+++++++  ++.|+.|++||+.+++.+..+. |.+.|++++|+|++++|++|+
T Consensus       249 ~i~d~~~~~~~~~~~~~~~i~~v~~s~~g~~l~s--~s~Dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~d~~~l~t~s  325 (337)
T d1gxra_         249 EVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVS--TGKDNLLNAWRTPYGASIFQSK-ESSSVLSCDISVDDKYIVTGS  325 (337)
T ss_dssp             EEEETTSSCEEEECCCSSCEEEEEECTTSSEEEE--EETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSCEEEEEE
T ss_pred             ccccccccccccccccccccceEEECCCCCEEEE--EeCCCeEEEEECCCCCEEEEcc-CCCCEEEEEEeCCCCEEEEEe
Confidence            9999987754322211    12289999999998  7889999999999999887765 788999999999999999999


Q ss_pred             CCCcEEEEec
Q psy14511        425 ADETISIWNC  434 (488)
Q Consensus       425 ~dg~v~iw~~  434 (488)
                      .||.|+|||+
T Consensus       326 ~D~~I~vWdl  335 (337)
T d1gxra_         326 GDKKATVYEV  335 (337)
T ss_dssp             TTSCEEEEEE
T ss_pred             CCCeEEEEEE
Confidence            9999999997

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.1e-41  Score=309.72  Aligned_cols=305  Identities=17%  Similarity=0.298  Sum_probs=238.4

Q ss_pred             EEeecCCeEEEEEcccCcccce---eecccCceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCc------------
Q psy14511          9 SCGTIGGNILHYDVRTHSDYPT---AITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQ------------   73 (488)
Q Consensus         9 a~g~~dg~i~iwd~~~~~~~~~---~~~~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~------------   73 (488)
                      ..+..++...+|+....+....   ...+|.+.|+||+|||||++||+|+|+.|+|||+.+++....+            
T Consensus        32 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~H~~~V~~l~fs~dg~~lasg~d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~  111 (388)
T d1erja_          32 LKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPEN  111 (388)
T ss_dssp             SEEECSSCEEEECTTSCCCEEEEEEEEEECSSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC----------
T ss_pred             cccCCCCcEEEeCCCCCcceeeeeEeeCCCCCcEEEEEECCCCCEEEEEeCCeEEEEEecccceEeeecccccccccccc
Confidence            3566788999999876554322   2236999999999999999999999999999999875432211            


Q ss_pred             ---ccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEee
Q psy14511         74 ---VNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHG  150 (488)
Q Consensus        74 ---~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (488)
                         .....|...|++++|+|++++|++++.   |+.|++||...++.....                             
T Consensus       112 ~~~~~~~~~~~~V~~l~~s~~~~~l~s~~~---dg~v~i~~~~~~~~~~~~-----------------------------  159 (388)
T d1erja_         112 LNTSSSPSSDLYIRSVCFSPDGKFLATGAE---DRLIRIWDIENRKIVMIL-----------------------------  159 (388)
T ss_dssp             -------CCCCBEEEEEECTTSSEEEEEET---TSCEEEEETTTTEEEEEE-----------------------------
T ss_pred             cccccccCCCCCEEEEEECCCCCcceeccc---cccccccccccccccccc-----------------------------
Confidence               122357788999999999988777776   999999998776543221                             


Q ss_pred             eeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCce
Q psy14511        151 FEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKT  230 (488)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~  230 (488)
                                                                                                      
T Consensus       160 --------------------------------------------------------------------------------  159 (388)
T d1erja_         160 --------------------------------------------------------------------------------  159 (388)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEE
Q psy14511        231 QLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILH  308 (488)
Q Consensus       231 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i  308 (488)
                            .+ |...|.++++++++..++++ +.++.+++||..+.........+...+....+  ++++|++++.||.|++
T Consensus       160 ------~~-h~~~v~~~~~~~~~~~~~~~-~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i  231 (388)
T d1erja_         160 ------QG-HEQDIYSLDYFPSGDKLVSG-SGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRV  231 (388)
T ss_dssp             ------CC-CSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEE
T ss_pred             ------cc-cccccccccccccccccccc-ccceeeeeeeccccccccccccccccccccccCCCCCeEEEEcCCCeEEE
Confidence                  12 77789999999999999998 99999999999998877777655555444444  6899999999999999


Q ss_pred             EECcCCCcc------ceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccce-----------------
Q psy14511        309 YDVRTHSDY------PTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGL-----------------  364 (488)
Q Consensus       309 ~d~~~~~~~------~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~-----------------  364 (488)
                      ||.++....      ......|...|.+++|+|++++|++++ |+.|++||+.+.........                 
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  311 (388)
T d1erja_         232 WDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFV  311 (388)
T ss_dssp             EETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCE
T ss_pred             eecccCccceeeccccccccCCCCCEEEEEECCCCCEEEEEECCCcEEEEeccCCccccccccccccceeeecccccceE
Confidence            999876422      122346788999999999999999999 69999999987644322111                 


Q ss_pred             eeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEE------cCCCCEEEEEeCCCcEEEEecC
Q psy14511        365 IVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVL------SPDQTCVAAASADETISIWNCF  435 (488)
Q Consensus       365 ~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~------s~~~~~l~t~~~dg~v~iw~~~  435 (488)
                      ...+|+|++++|++  |+.||.|++||+++++++.++++|.+.|+++++      +|++++||||+.||.|+||+++
T Consensus       312 ~~~~~s~~~~~l~s--g~~dg~i~vwd~~~~~~~~~l~~H~~~V~~~~~~~~~~~spd~~~l~s~s~Dg~I~iW~~~  386 (388)
T d1erja_         312 LSVATTQNDEYILS--GSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK  386 (388)
T ss_dssp             EEEEECGGGCEEEE--EETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred             EEEEECCCCCEEEE--EeCCCEEEEEECCCCcEEEEEeCCCCCEEEEEEecCcccCCCCCEEEEEeCCCEEEEEeee
Confidence            12289999999999  789999999999999999999999999999975      6789999999999999999985

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=9.1e-41  Score=296.15  Aligned_cols=285  Identities=19%  Similarity=0.329  Sum_probs=237.8

Q ss_pred             ceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceE
Q psy14511         29 PTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTV  107 (488)
Q Consensus        29 ~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i  107 (488)
                      ...|.||.++|++|+|+|++++||+|+ |++|+|||+++++   .+..+.+|...|.+++|+|++..+++...   ++.+
T Consensus        10 ~~~L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~---~~~~~~~h~~~V~~~~~~~~~~~~~~~~~---~~~~   83 (317)
T d1vyhc1          10 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD---FERTLKGHTDSVQDISFDHSGKLLASCSA---DMTI   83 (317)
T ss_dssp             SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCC---CCEEECCCSSCEEEEEECTTSSEEEEEET---TSCC
T ss_pred             cEEEcCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCC---EEEEEeCCCCcEEEEeeeccccccccccc---cccc
Confidence            457899999999999999999999998 9999999998754   45567889999999999999988777776   9999


Q ss_pred             EEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCc
Q psy14511        108 RLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPE  187 (488)
Q Consensus       108 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (488)
                      .+|+....+....+..+........                                                       
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------------------------  108 (317)
T d1vyhc1          84 KLWDFQGFECIRTMHGHDHNVSSVS-------------------------------------------------------  108 (317)
T ss_dssp             CEEETTSSCEEECCCCCSSCEEEEE-------------------------------------------------------
T ss_pred             ccccccccccccccccccccceeee-------------------------------------------------------
Confidence            9999887765544443322111111                                                       


Q ss_pred             eeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEE
Q psy14511        188 RILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYID  267 (488)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~  267 (488)
                                      +....+.+++++.|+.+++||+.+++....+..   +...+.+++|+|++++++++ +.|+.|+
T Consensus       109 ----------------~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~-~~d~~v~  168 (317)
T d1vyhc1         109 ----------------IMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG---HREWVRMVRPNQDGTLIASC-SNDQTVR  168 (317)
T ss_dssp             ----------------ECSSSSEEEEEETTSEEEEEETTTCCEEEEEEC---CSSCEEEEEECTTSSEEEEE-ETTSCEE
T ss_pred             ----------------ccCCCceEEeeccCcceeEeecccceeeeEEcc---CCCcceeeecccCCCEEEEE-eCCCeEE
Confidence                            111235678888999999999999987776654   78899999999999999999 9999999


Q ss_pred             EEECCcceeeeeeccccccEEEEEec----------------------CCEEEEeecCCeEEEEECcCCCccceeeecCC
Q psy14511        268 LWHEQEERLIQKLRTHMHQVIAMCWN----------------------GNLLSCGTIGGNILHYDVRTHSDYPTAITREG  325 (488)
Q Consensus       268 i~d~~~~~~~~~~~~~~~~v~~~~~~----------------------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~  325 (488)
                      +|+..+++....+..|...+.++.+.                      +..+++++.|+.|++||++++ .+...+.+|.
T Consensus       169 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~-~~~~~~~~~~  247 (317)
T d1vyhc1         169 VWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG-MCLMTLVGHD  247 (317)
T ss_dssp             EEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTT-EEEEEEECCS
T ss_pred             EEeeccceeeEEEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCCC-cEEEEEeCCC
Confidence            99999999999999999988888762                      347899999999999999986 5777888999


Q ss_pred             ccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeecc
Q psy14511        326 DVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQ  405 (488)
Q Consensus       326 ~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~  405 (488)
                      ..|.+++|+|++++|++++                                      .||.|++||+.+++++.++.+|.
T Consensus       248 ~~v~~~~~~~~~~~l~s~~--------------------------------------~dg~i~iwd~~~~~~~~~~~~h~  289 (317)
T d1vyhc1         248 NWVRGVLFHSGGKFILSCA--------------------------------------DDKTLRVWDYKNKRCMKTLNAHE  289 (317)
T ss_dssp             SCEEEEEECSSSSCEEEEE--------------------------------------TTTEEEEECCTTSCCCEEEECCS
T ss_pred             CCEEEEEECCCCCEEEEEE--------------------------------------CCCeEEEEECCCCcEEEEEcCCC
Confidence            9999999999999998875                                      24444555555567788899999


Q ss_pred             ccEEEEEEcCCCCEEEEEeCCCcEEEEe
Q psy14511        406 ERILSAVLSPDQTCVAAASADETISIWN  433 (488)
Q Consensus       406 ~~v~~~~~s~~~~~l~t~~~dg~v~iw~  433 (488)
                      ++|++++|+|++++|++|+.||+|++||
T Consensus       290 ~~V~~~~~s~~~~~l~s~s~Dg~i~iWd  317 (317)
T d1vyhc1         290 HFVTSLDFHKTAPYVVTGSVDQTVKVWE  317 (317)
T ss_dssp             SCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred             CCEEEEEEcCCCCEEEEEeCCCeEEEeC
Confidence            9999999999999999999999999997

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=1.9e-40  Score=292.10  Aligned_cols=272  Identities=21%  Similarity=0.325  Sum_probs=216.8

Q ss_pred             cCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCccccccccc
Q psy14511          3 WNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLS   81 (488)
Q Consensus         3 ~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~   81 (488)
                      .+|+.||.+. ++.|.+||+.+... ...+.+|.+.|++++|+|+|++||+|+ |+.|+|||+.+.... ....+.+|.+
T Consensus        27 ~~g~~l~~~~-~~~v~i~~~~~~~~-~~~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~~~-~~~~~~~~~~  103 (311)
T d1nr0a1          27 PAGDKIQYCN-GTSVYTVPVGSLTD-TEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHI-LKTTIPVFSG  103 (311)
T ss_dssp             TTSSEEEEEE-TTEEEEEETTCSSC-CEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCC-EEEEEECSSS
T ss_pred             CCCCEEEEEe-CCEEEEEECCCCce-eEEEcCCCCCEEEEEEeCCCCeEeccccCceEeeeeeeccccc-cccccccccC
Confidence            4889999875 77899999998774 466889999999999999999999998 999999999875432 2234678999


Q ss_pred             ceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecc
Q psy14511         82 AVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQ  161 (488)
Q Consensus        82 ~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (488)
                      +|.+++|+|+++++++++.. .+..+++|++++++....+                                        
T Consensus       104 ~v~~v~~s~d~~~l~~~~~~-~~~~~~v~~~~~~~~~~~l----------------------------------------  142 (311)
T d1nr0a1         104 PVKDISWDSESKRIAAVGEG-RERFGHVFLFDTGTSNGNL----------------------------------------  142 (311)
T ss_dssp             CEEEEEECTTSCEEEEEECC-SSCSEEEEETTTCCBCBCC----------------------------------------
T ss_pred             cccccccccccccccccccc-ccccccccccccccccccc----------------------------------------
Confidence            99999999999988877642 3567899998876532211                                        


Q ss_pred             ccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCC
Q psy14511        162 SKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDN  241 (488)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~  241 (488)
                                                                                                 .+ |.
T Consensus       143 ---------------------------------------------------------------------------~~-h~  146 (311)
T d1nr0a1         143 ---------------------------------------------------------------------------TG-QA  146 (311)
T ss_dssp             ---------------------------------------------------------------------------CC-CS
T ss_pred             ---------------------------------------------------------------------------cc-cc
Confidence                                                                                       11 67


Q ss_pred             CceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCcc--
Q psy14511        242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDY--  317 (488)
Q Consensus       242 ~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~--  317 (488)
                      ..|++++|+|++++++++++.|+.|++||+++++....+..|..+|.++.+  +++++++++.|+.+++||+.++...  
T Consensus       147 ~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~~~~~~~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~  226 (311)
T d1nr0a1         147 RAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGV  226 (311)
T ss_dssp             SCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred             cccccccccccceeeecccccccccccccccccccccccccccccccccccCcccccccccccccccccccccccccccc
Confidence            789999999999875544489999999999999999999999999999999  7899999999999999999875421  


Q ss_pred             ----ceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeC
Q psy14511        318 ----PTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEY  392 (488)
Q Consensus       318 ----~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~  392 (488)
                          .....+|...|.+++|+|++++|++++ |+.|+|||                                       +
T Consensus       227 ~~~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~iwd---------------------------------------~  267 (311)
T d1nr0a1         227 FEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWN---------------------------------------V  267 (311)
T ss_dssp             CBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEE---------------------------------------T
T ss_pred             ccccccccccccccccccccCCCCCEEEEEeCCCeEEEEE---------------------------------------C
Confidence                122346888999999999999999886 35555554                                       4


Q ss_pred             CCcceeEEEeeccc---cEEEEEEcCCCCEEEEEeCCCcEEEEecC
Q psy14511        393 PRLHLIEELKIHQE---RILSAVLSPDQTCVAAASADETISIWNCF  435 (488)
Q Consensus       393 ~~~~~~~~~~~~~~---~v~~~~~s~~~~~l~t~~~dg~v~iw~~~  435 (488)
                      ++++++.++..|..   .+.++.|  ++++|++++.||.|++||++
T Consensus       268 ~t~~~~~~l~~~~~~~~~~~~~~~--~~~~l~s~s~dG~i~~wd~d  311 (311)
T d1nr0a1         268 ATLKVEKTIPVGTRIEDQQLGIIW--TKQALVSISANGFINFVNPE  311 (311)
T ss_dssp             TTTEEEEEEECCSSGGGCEEEEEE--CSSCEEEEETTCCEEEEETT
T ss_pred             CCCcEEEEEECCCCccceEEEEEe--cCCEEEEEECCCEEEEEeCC
Confidence            55566667765533   3444544  56789999999999999974

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.9e-39  Score=287.70  Aligned_cols=323  Identities=18%  Similarity=0.255  Sum_probs=253.8

Q ss_pred             EEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEee
Q psy14511         20 YDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLAT   98 (488)
Q Consensus        20 wd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~   98 (488)
                      |+....+ ...+++||.+.|.+ +++++|++||||+ |++|+|||+.+++   ++..+.+|.+.|.+++|+|+  +++++
T Consensus         1 W~~~~~~-~~~~l~GH~~~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~~~~---~~~~~~~h~~~V~~v~~~~~--~l~s~   73 (342)
T d2ovrb2           1 WRRGELK-SPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGK---CLRTLVGHTGGVWSSQMRDN--IIISG   73 (342)
T ss_dssp             HHHSCCC-CCEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCC---EEEECCCCSSCEEEEEEETT--EEEEE
T ss_pred             CCCCCCC-cCEEECCcCCceEE-EEEECCCEEEEEeCCCeEEEEECCCCC---EEEEEeCCCCCEEEEEeCCC--ccccc
Confidence            4444444 34678999999865 4777899999998 9999999998754   45667899999999999975  56666


Q ss_pred             eCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccc
Q psy14511         99 GGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKL  178 (488)
Q Consensus        99 ~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (488)
                      +.   |+.+++|+................                                                   
T Consensus        74 s~---D~~~~~~~~~~~~~~~~~~~~~~~---------------------------------------------------   99 (342)
T d2ovrb2          74 ST---DRTLKVWNAETGECIHTLYGHTST---------------------------------------------------   99 (342)
T ss_dssp             ET---TSCEEEEETTTTEEEEEECCCSSC---------------------------------------------------
T ss_pred             ee---cccccccccccccceeccccccee---------------------------------------------------
Confidence            65   999999998876654433322110                                                   


Q ss_pred             cccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEE
Q psy14511        179 PRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAV  258 (488)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~  258 (488)
                                            +......+.....+..|+.+.+|+..+++........   ...  .....+....++.
T Consensus       100 ----------------------~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~  152 (342)
T d2ovrb2         100 ----------------------VRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGH---VAA--VRCVQYDGRRVVS  152 (342)
T ss_dssp             ----------------------EEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECC---SSC--EEEEEECSSCEEE
T ss_pred             ----------------------EeeeecccccccccccceeEEEeecccccceeeeecc---ccc--ceeeccccceeee
Confidence                                  1112223456777889999999999998877666532   222  2233445567777


Q ss_pred             EeCCCCcEEEEECCcceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCc
Q psy14511        259 TNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGR  338 (488)
Q Consensus       259 ~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~  338 (488)
                      + +.++.+++||....+.+..+.+|...+..+.+++..+++++.||.|++||++.. .....+..|...+.+++++  ++
T Consensus       153 ~-~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~~~d~~~~-~~~~~~~~~~~~v~~~~~~--~~  228 (342)
T d2ovrb2         153 G-AYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETG-NCIHTLTGHQSLTSGMELK--DN  228 (342)
T ss_dssp             E-ETTSCEEEEEGGGTEEEEEECCCSSCEEEEEECSSEEEEEETTSCEEEEETTTC-CEEEEECCCCSCEEEEEEE--TT
T ss_pred             e-cCCCeEEEeecccceeeEEEcCcccccccccCCCCEEEEEeCCCeEEEeecccc-eeeeEecccccceeEEecC--CC
Confidence            7 899999999999999999999999999999999999999999999999999986 4677888899989887775  46


Q ss_pred             EEEEEe-cCeEEEEECCCCCCCccccee------eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEe-----eccc
Q psy14511        339 YLASGS-NNTVKIWDFRQLDAKRPLGLI------VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELK-----IHQE  406 (488)
Q Consensus       339 ~l~~~~-d~~i~iwd~~~~~~~~~~~~~------~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~-----~~~~  406 (488)
                      +|++++ |+.|++||+...+....+...      ..++.++++++++  ++.||.|++||+++++.+.++.     +|..
T Consensus       229 ~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s--~s~Dg~i~iwd~~tg~~i~~~~~~~~~~~~~  306 (342)
T d2ovrb2         229 ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVIT--SSDDGTVKLWDLKTGEFIRNLVTLESGGSGG  306 (342)
T ss_dssp             EEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEE--EETTSEEEEEETTTCCEEEEEEECTTGGGTC
T ss_pred             EEEEEcCCCEEEEEecccccccccccccceeeeceeecccCCCeeEE--EcCCCEEEEEECCCCCEEEEEecccCCCCCC
Confidence            899988 699999999887654433221      2367778889988  7889999999999999988875     5677


Q ss_pred             cEEEEEEcCCCCEEEEEeCCCc----EEEEecCC
Q psy14511        407 RILSAVLSPDQTCVAAASADET----ISIWNCFP  436 (488)
Q Consensus       407 ~v~~~~~s~~~~~l~t~~~dg~----v~iw~~~~  436 (488)
                      .|++++|+|++.+||+|+.||+    |++||++.
T Consensus       307 ~v~~v~~s~~~~~la~g~~dGt~~~~l~~~Df~~  340 (342)
T d2ovrb2         307 VVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV  340 (342)
T ss_dssp             EEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred             CEEEEEECCCCCEEEEEeCCCCCeeEEEEEeCCC
Confidence            8999999999999999999986    99999864

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.1e-38  Score=285.78  Aligned_cols=290  Identities=19%  Similarity=0.297  Sum_probs=228.7

Q ss_pred             cceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccce
Q psy14511         28 YPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQT  106 (488)
Q Consensus        28 ~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~  106 (488)
                      ..++|.||.++|++++|+|++++||+|+ ||.|+|||+.+++   .+..+..|..+|.+++|+|+++++++++.   |+.
T Consensus        47 ~~~tL~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~---~~~~~~~~~~~v~~v~~~~~~~~l~~~~~---d~~  120 (340)
T d1tbga_          47 TRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTN---KVHAIPLRSSWVMTCAYAPSGNYVACGGL---DNI  120 (340)
T ss_dssp             EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTE---EEEEEECSCSCEEEEEECTTSSEEEEEET---TCC
T ss_pred             eeEEECCCCCCEEEEEECCCCCEEEEEECCCceeeeecccce---eEEEEecccccEEeeEeeccceeeeeecc---cce
Confidence            3456899999999999999999999998 9999999998754   44556789999999999999998888776   999


Q ss_pred             EEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCC
Q psy14511        107 VRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKP  186 (488)
Q Consensus       107 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (488)
                      +++|+................                                                           
T Consensus       121 i~~~~~~~~~~~~~~~~~~~~-----------------------------------------------------------  141 (340)
T d1tbga_         121 CSIYNLKTREGNVRVSRELAG-----------------------------------------------------------  141 (340)
T ss_dssp             EEEEESSSSCSCCCEEEEECC-----------------------------------------------------------
T ss_pred             eecccccccccccccceeccc-----------------------------------------------------------
Confidence            999998655432211100000                                                           


Q ss_pred             ceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcE
Q psy14511        187 ERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYI  266 (488)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i  266 (488)
                               ...............+.....+.....+.............   +...+....+.+.+..++++ +.|+.|
T Consensus       142 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~d~~v  208 (340)
T d1tbga_         142 ---------HTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTG---HTGDVMSLSLAPDTRLFVSG-ACDASA  208 (340)
T ss_dssp             ---------CSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEEC---CSSCEEEEEECTTSSEEEEE-ETTTEE
T ss_pred             ---------ccccccccccccccccccccccccccccccccccccccccc---cceeEeeeccccccceeEEe-ecCceE
Confidence                     00000000111234566677888999998887766555444   67788999999999999988 999999


Q ss_pred             EEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccce-eeecCCccEEEEEEccCCcEEEEE
Q psy14511        267 DLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPT-AITREGDVVCGLKWSPNGRYLASG  343 (488)
Q Consensus       267 ~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~~i~~~~~s~~~~~l~~~  343 (488)
                      ++||+++++.+..+.+|...|.+++|  ++++|++++.||.|++||++....... ....+...|.+++|+|++++|+++
T Consensus       209 ~i~d~~~~~~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g  288 (340)
T d1tbga_         209 KLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAG  288 (340)
T ss_dssp             EEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECSSSCEEEEE
T ss_pred             EEEECCCCcEEEEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeecccccccccccccccCceEEEEECCCCCEEEEE
Confidence            99999999999999999999999999  689999999999999999987543221 234566779999999999998887


Q ss_pred             ecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEE
Q psy14511        344 SNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAA  423 (488)
Q Consensus       344 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~  423 (488)
                      +                                      .||.|++||+.+++++.++.+|.++|++++|+||+++|+||
T Consensus       289 ~--------------------------------------~dg~i~iwd~~~~~~~~~~~~H~~~V~~l~~s~d~~~l~s~  330 (340)
T d1tbga_         289 Y--------------------------------------DDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATG  330 (340)
T ss_dssp             E--------------------------------------TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEE
T ss_pred             E--------------------------------------CCCEEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEE
Confidence            5                                      24445555555667788899999999999999999999999


Q ss_pred             eCCCcEEEEe
Q psy14511        424 SADETISIWN  433 (488)
Q Consensus       424 ~~dg~v~iw~  433 (488)
                      +.||.|++||
T Consensus       331 s~Dg~v~iWd  340 (340)
T d1tbga_         331 SWDSFLKIWN  340 (340)
T ss_dssp             ETTSCEEEEC
T ss_pred             ccCCEEEEeC
Confidence            9999999997

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.3e-38  Score=286.96  Aligned_cols=330  Identities=16%  Similarity=0.182  Sum_probs=235.2

Q ss_pred             ccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccc
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHL   80 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~   80 (488)
                      ++||++||+|+.||+|+|||+.+++.+ ..+.+|.++|++++|+|++ +|++++ |+.|++|+.......... ....+.
T Consensus        20 ~~~~~~l~tgs~Dg~i~vWd~~~~~~~-~~l~~H~~~V~~l~~s~~~-~l~s~s~D~~i~iw~~~~~~~~~~~-~~~~~~   96 (355)
T d1nexb2          20 QFEDNYVITGADDKMIRVYDSINKKFL-LQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVF-EGHNST   96 (355)
T ss_dssp             EEETTEEEEEETTTEEEEEETTTTEEE-EEEECCSSCEEEEEEETTT-EEEEEETTCCEEEEETTTTEEEEEE-CCCSSC
T ss_pred             EECCCEEEEEeCCCeEEEEECCCCcEE-EEEECCCCCEEEEEEcCCC-EEEEEeccccccccccccccccccc-cccccc
Confidence            458999999999999999999998854 6789999999999999865 778887 999999999864433222 223344


Q ss_pred             cceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceec
Q psy14511         81 SAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLN  160 (488)
Q Consensus        81 ~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (488)
                      .......+.++++++++.+.   |+.|++||+.++................. ....  .....                
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~---d~~i~iw~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~----------------  154 (355)
T d1nexb2          97 VRCLDIVEYKNIKYIVTGSR---DNTLHVWKLPKESSVPDHGEEHDYPLVFH-TPEE--NPYFV----------------  154 (355)
T ss_dssp             EEEEEEEEETTEEEEEEEET---TSEEEEEECCC-----------CCCEEES-CTTT--CTTEE----------------
T ss_pred             ccccccccccccceeeeecC---CCcEEEEEccCCceeccccccceecccee-cccc--cccee----------------
Confidence            55667778888877777666   99999999987765443322211000000 0000  00000                


Q ss_pred             cccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCC
Q psy14511        161 QSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYD  240 (488)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~  240 (488)
                                                     .........+......++.++.+..|+.+++||+.+++.......   +
T Consensus       155 -------------------------------~~~~~~~~~v~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~---~  200 (355)
T d1nexb2         155 -------------------------------GVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSG---H  200 (355)
T ss_dssp             -------------------------------EEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECC---C
T ss_pred             -------------------------------eeeeeccccccccccccceeeeecccceeeeeecccccceeeeec---c
Confidence                                           000000111222334456677888999999999999887665544   6


Q ss_pred             CCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCcccee
Q psy14511        241 NAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTA  320 (488)
Q Consensus       241 ~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~  320 (488)
                      ...+.++.++|+++.++++ +.|+.|++||.+++..+..+.+|...|.+++++++++++++.||.|++||+++..   ..
T Consensus       201 ~~~~~~~~~~~~~~~~~~~-~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~---~~  276 (355)
T d1nexb2         201 TDRIYSTIYDHERKRCISA-SMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYS---RK  276 (355)
T ss_dssp             SSCEEEEEEETTTTEEEEE-ETTSCEEEEETTTCCEEEEECCCSSCCCEEEECSSEEEEECTTSEEEEEETTTCC---EE
T ss_pred             ccccccccccccceeeecc-cccceEEeeeccccccccccccccccccccccccceeeeeecccccccccccccc---ee
Confidence            7789999999999999999 9999999999999999999999999999999999999999999999999998753   33


Q ss_pred             eecCCccEEEE-EEccCCcEEEEEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeE
Q psy14511        321 ITREGDVVCGL-KWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIE  399 (488)
Q Consensus       321 ~~~~~~~i~~~-~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~  399 (488)
                      +..|...+..+ .++++++++++++|+.|++||+++                                       ++++.
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~l~~g~d~~i~vwd~~t---------------------------------------g~~~~  317 (355)
T d1nexb2         277 FSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRS---------------------------------------GKLVH  317 (355)
T ss_dssp             EEEECTTCCCCCEEEECSSEEEEEETTEEEEEETTT---------------------------------------CCBCC
T ss_pred             cccccCCceEEEEEcCCCCEEEEEeCCEEEEEECCC---------------------------------------CCEEE
Confidence            44444445444 556777777777666666666654                                       44442


Q ss_pred             -EEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEec
Q psy14511        400 -ELKIHQERILSAVLSPDQTCVAAASADETISIWNC  434 (488)
Q Consensus       400 -~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~  434 (488)
                       .+.+|.++|++++|+|+ .++++++.||.++||-+
T Consensus       318 ~~~~~~~~~V~~v~~~~~-~~~~~~s~dg~~~l~~~  352 (355)
T d1nexb2         318 ANILKDADQIWSVNFKGK-TLVAAVEKDGQSFLEIL  352 (355)
T ss_dssp             SCTTTTCSEEEEEEEETT-EEEEEEESSSCEEEEEE
T ss_pred             EEecCCCCCEEEEEEcCC-eEEEEEECCCcEEEEEE
Confidence             35678899999999987 57888999999777654

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-38  Score=282.15  Aligned_cols=266  Identities=16%  Similarity=0.241  Sum_probs=217.6

Q ss_pred             ccCCceEEEeecCCeEEEEEcccCcccce----eecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccc
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTHSDYPT----AITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNN   76 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~----~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~   76 (488)
                      +.||++||+|+ ||.|+|||+.+......    ...+|.+.|.+++|+|+|++|++++ |+.|++||+.... ......+
T Consensus        60 s~~g~~latg~-dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~dg~i~iwd~~~~~-~~~~~~~  137 (337)
T d1gxra_          60 SNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPT-PRIKAEL  137 (337)
T ss_dssp             CSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC---EEEEEE
T ss_pred             CCCCCEEEEEE-CCEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcCCCCEEEEeecccccccccccccc-ccccccc
Confidence            45899999987 89999999987543221    2357999999999999999999998 9999999987533 2334456


Q ss_pred             cccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeecccc
Q psy14511         77 QCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRK  156 (488)
Q Consensus        77 ~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (488)
                      ..|...+.+++|+|++..+++++.   |+.+++|++.+++.......+...+.                           
T Consensus       138 ~~~~~~v~~~~~~~~~~~l~s~~~---d~~i~~~~~~~~~~~~~~~~~~~~v~---------------------------  187 (337)
T d1gxra_         138 TSSAPACYALAISPDSKVCFSCCS---DGNIAVWDLHNQTLVRQFQGHTDGAS---------------------------  187 (337)
T ss_dssp             ECSSSCEEEEEECTTSSEEEEEET---TSCEEEEETTTTEEEEEECCCSSCEE---------------------------
T ss_pred             cccccccccccccccccccccccc---cccccccccccccccccccccccccc---------------------------
Confidence            779999999999999988777776   99999999999887665554433222                           


Q ss_pred             ceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeee--CCCcEEEEECCCeEEEEECCCCceEEEE
Q psy14511        157 KVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDW--GYHDTLAVALDTSVYTWNTKTNKTQLLV  234 (488)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~v~iw~~~~~~~~~~~  234 (488)
                                                                    ++.+  ....+++++.|+.+++||+++++.....
T Consensus       188 ----------------------------------------------~l~~s~~~~~~~~~~~d~~v~i~d~~~~~~~~~~  221 (337)
T d1gxra_         188 ----------------------------------------------CIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQH  221 (337)
T ss_dssp             ----------------------------------------------EEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred             ----------------------------------------------cccccccccccccccccccccccccccceeeccc
Confidence                                                          1222  2346777889999999999999877766


Q ss_pred             ecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECc
Q psy14511        235 EYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVR  312 (488)
Q Consensus       235 ~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~  312 (488)
                      .    +...|.+++|+|+++.++++ +.++.+++||++.++.. ....|...|.+++|  ++++|++++.||.|++||+.
T Consensus       222 ~----~~~~i~~l~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~-~~~~~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~  295 (337)
T d1gxra_         222 D----FTSQIFSLGYCPTGEWLAVG-MESSNVEVLHVNKPDKY-QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTP  295 (337)
T ss_dssp             E----CSSCEEEEEECTTSSEEEEE-ETTSCEEEEETTSSCEE-EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred             c----cccceEEEEEccccccccee-ccccccccccccccccc-cccccccccceEEECCCCCEEEEEeCCCeEEEEECC
Confidence            5    67789999999999999998 89999999999987665 45578999999999  78999999999999999999


Q ss_pred             CCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEEC
Q psy14511        313 THSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDF  353 (488)
Q Consensus       313 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~  353 (488)
                      +++. +. ...|...|.+++|+|++++|++++ |+.|+|||+
T Consensus       296 ~~~~-~~-~~~~~~~v~~~~~s~d~~~l~t~s~D~~I~vWdl  335 (337)
T d1gxra_         296 YGAS-IF-QSKESSSVLSCDISVDDKYIVTGSGDKKATVYEV  335 (337)
T ss_dssp             TCCE-EE-EEECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred             CCCE-EE-EccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEEE
Confidence            8643 33 345778899999999999999998 699999996

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=3.5e-38  Score=285.72  Aligned_cols=315  Identities=11%  Similarity=0.170  Sum_probs=226.7

Q ss_pred             ccCCceEEEeecCCeEEEEEcccCcc-cceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCccccccc
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTHSD-YPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCH   79 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~~~-~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h   79 (488)
                      +.||++||+|+.||.|+|||..+++. ....+.+|.++|++++|+|++++|++++ |+.|+|||+.++... ....+.+|
T Consensus        16 s~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~~-~~~~~~~~   94 (371)
T d1k8kc_          16 NKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWK-PTLVILRI   94 (371)
T ss_dssp             CTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEE-EEEECCCC
T ss_pred             CCCCCEEEEEeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeecccccc-cccccccc
Confidence            34999999999999999999987653 2356789999999999999999999998 999999999864432 33445678


Q ss_pred             ccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeecccccee
Q psy14511         80 LSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVL  159 (488)
Q Consensus        80 ~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (488)
                      ...|.+++|+|+++.+++++.   |+++++|+++........                                      
T Consensus        95 ~~~v~~i~~~p~~~~l~~~s~---d~~i~i~~~~~~~~~~~~--------------------------------------  133 (371)
T d1k8kc_          95 NRAARCVRWAPNEKKFAVGSG---SRVISICYFEQENDWWVC--------------------------------------  133 (371)
T ss_dssp             SSCEEEEEECTTSSEEEEEET---TSSEEEEEEETTTTEEEE--------------------------------------
T ss_pred             cccccccccccccccceeecc---cCcceeeeeecccccccc--------------------------------------
Confidence            999999999999998877776   999999998654321110                                      


Q ss_pred             ccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCC
Q psy14511        160 NQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTY  239 (488)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~  239 (488)
                                                                                               ...... 
T Consensus       134 -------------------------------------------------------------------------~~~~~~-  139 (371)
T d1k8kc_         134 -------------------------------------------------------------------------KHIKKP-  139 (371)
T ss_dssp             -------------------------------------------------------------------------EEECTT-
T ss_pred             -------------------------------------------------------------------------cccccc-
Confidence                                                                                     111112 


Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcc------------------eeeeeeccccccEEEEEe--cCCEEEE
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEE------------------RLIQKLRTHMHQVIAMCW--NGNLLSC  299 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~------------------~~~~~~~~~~~~v~~~~~--~~~~l~~  299 (488)
                      +...|.+++|+|++++|+++ +.|+.+++|+....                  +.+.....|...+.+++|  +++.|++
T Consensus       140 ~~~~v~~v~~~p~~~~l~s~-s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  218 (371)
T d1k8kc_         140 IRSTVLSLDWHPNSVLLAAG-SCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAW  218 (371)
T ss_dssp             CCSCEEEEEECTTSSEEEEE-ETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEE
T ss_pred             cccccccccccccccceecc-ccCcEEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeecccccccc
Confidence            77889999999999999998 99999999997542                  344556678899999999  6899999


Q ss_pred             eecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEE-
Q psy14511        300 GTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVT-  378 (488)
Q Consensus       300 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~-  378 (488)
                      ++.|+.|++||+..+ .....+..|..+|.+++|+|++++|++|.|+.+++|................   ........ 
T Consensus       219 ~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~s~~fs~d~~~la~g~d~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~  294 (371)
T d1k8kc_         219 VSHDSTVCLADADKK-MAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLD---VPKQSSQRG  294 (371)
T ss_dssp             EETTTEEEEEEGGGT-TEEEEEECSSCCEEEEEEEETTEEEEEETTSSCEEEEEETTTTEEEECCCCC---CC-------
T ss_pred             cccCCcceEEeeecc-cceeeeecccccceeeeecCCCCEEEEEcCCceEEEEeeCCCceEEEeeeec---Ccccccccc
Confidence            999999999999886 4677788899999999999999999998887776766544321111100000   00000000 


Q ss_pred             Ec-----cCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCC----CEEEEEeCCCcEEEEecCCCC
Q psy14511        379 SH-----GKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQ----TCVAAASADETISIWNCFPRD  438 (488)
Q Consensus       379 ~~-----g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~----~~l~t~~~dg~v~iw~~~~~~  438 (488)
                      ..     ...+......... .........|.+.|+++++.|.+    ..|+|++.||.|++||+++.+
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~H~~~I~~i~~~~~~~~~~~~~~T~g~Dg~v~iW~~~~~~  362 (371)
T d1k8kc_         295 LTARERFQNLDKKASSEGSA-AAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE  362 (371)
T ss_dssp             -CHHHHHHHCCCCC----------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHH
T ss_pred             ccceeeEecccceeEEeccc-cccceecccccCCEEEEEEeCCCCcceEEEEEEcCCCeEEEEeCCcCh
Confidence            00     0001001110000 00111123589999999998854    368999999999999997643

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=3.7e-38  Score=277.09  Aligned_cols=280  Identities=14%  Similarity=0.163  Sum_probs=211.8

Q ss_pred             cceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccce
Q psy14511         28 YPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQT  106 (488)
Q Consensus        28 ~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~  106 (488)
                      +.+++.||.++|++++|+|||++||+|+ |+.|++||+++++..+.+  ..+|...|++++|+|+++ +++++.   |+.
T Consensus         4 ~~~~~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~--~~~h~~~v~~v~~~~~g~-~~~~~~---d~~   77 (299)
T d1nr0a2           4 IDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVF--PDVHATMITGIKTTSKGD-LFTVSW---DDH   77 (299)
T ss_dssp             EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECS--SCSCSSCEEEEEECTTSC-EEEEET---TTE
T ss_pred             cceEcCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEE--cCCCCCcEEEEEeeccce-eecccc---eee
Confidence            4577899999999999999999999998 999999999886544332  356999999999999985 667776   999


Q ss_pred             EEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCC
Q psy14511        107 VRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKP  186 (488)
Q Consensus       107 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (488)
                      +++|+.........                                                                  
T Consensus        78 v~~~~~~~~~~~~~------------------------------------------------------------------   91 (299)
T d1nr0a2          78 LKVVPAGGSGVDSS------------------------------------------------------------------   91 (299)
T ss_dssp             EEEECSSSSSSCTT------------------------------------------------------------------
T ss_pred             EEEeccCCcccccc------------------------------------------------------------------
Confidence            99999754321000                                                                  


Q ss_pred             ceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcE
Q psy14511        187 ERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYI  266 (488)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i  266 (488)
                                                                .. ....    +...+.+++++|+++.++++  .++.+
T Consensus        92 ------------------------------------------~~-~~~~----~~~~~~~~~~s~~g~~~~~~--~~~~i  122 (299)
T d1nr0a2          92 ------------------------------------------KA-VANK----LSSQPLGLAVSADGDIAVAA--CYKHI  122 (299)
T ss_dssp             ------------------------------------------SC-CEEE----CSSCEEEEEECTTSSCEEEE--ESSEE
T ss_pred             ------------------------------------------cc-cccc----cccccccccccccccccccc--ccccc
Confidence                                                      00 0000    55678889999999877766  56789


Q ss_pred             EEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe
Q psy14511        267 DLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS  344 (488)
Q Consensus       267 ~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~  344 (488)
                      ++|+....  ......  ..+.++++  +++++++++.||.|++||+++..........|...|.+++|+|++++|++++
T Consensus       123 ~~~~~~~~--~~~~~~--~~~~~~~~s~~~~~l~~g~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~  198 (299)
T d1nr0a2         123 AIYSHGKL--TEVPIS--YNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATD  198 (299)
T ss_dssp             EEEETTEE--EEEECS--SCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEE
T ss_pred             cccccccc--cccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99986542  222223  34555666  7899999999999999999876544445667889999999999999999998


Q ss_pred             -cCeEEEEECCCCCCCccccee------e--eeecCCCCEEEEEccCCCCeEEEEeCCCcceeE--EEeec-cccEEEEE
Q psy14511        345 -NNTVKIWDFRQLDAKRPLGLI------V--PKLKREGRELVTSHGKQDCSLKMWEYPRLHLIE--ELKIH-QERILSAV  412 (488)
Q Consensus       345 -d~~i~iwd~~~~~~~~~~~~~------~--~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~--~~~~~-~~~v~~~~  412 (488)
                       ++.|++||+.+..........      +  .+|+|+++++++  |+.|+.|++||+.+++...  ....| ...|..+.
T Consensus       199 ~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s--gs~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~  276 (299)
T d1nr0a2         199 QSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLAT--GSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVI  276 (299)
T ss_dssp             TTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEE--EETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccceEE--EcCCCEEEEEECCCCCcceEEEecCCCCCcEEEEE
Confidence             599999999875433322211      2  289999999999  7899999999998765433  33333 44566665


Q ss_pred             EcCCCCEEEEEeCCCcEEEEecC
Q psy14511        413 LSPDQTCVAAASADETISIWNCF  435 (488)
Q Consensus       413 ~s~~~~~l~t~~~dg~v~iw~~~  435 (488)
                      | +++++|++++.||.|++||+.
T Consensus       277 ~-~~~~~l~s~s~D~~i~iWdl~  298 (299)
T d1nr0a2         277 W-LNETTIVSAGQDSNIKFWNVP  298 (299)
T ss_dssp             E-EETTEEEEEETTSCEEEEECC
T ss_pred             E-CCCCEEEEEeCCCEEEEEecc
Confidence            5 667899999999999999984

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=7.3e-37  Score=269.09  Aligned_cols=289  Identities=14%  Similarity=0.178  Sum_probs=222.8

Q ss_pred             ccCceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecC
Q psy14511         34 REGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSM  113 (488)
Q Consensus        34 ~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~  113 (488)
                      .+++.+..++++|+|+.||.+.++.|.+||+++..   ....+.+|...|++++|+|+|++|++++.   |++|++||+.
T Consensus        15 ~~r~~~~~~a~~~~g~~l~~~~~~~v~i~~~~~~~---~~~~~~~H~~~v~~~~~sp~g~~latg~~---dg~i~iwd~~   88 (311)
T d1nr0a1          15 TARGTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLT---DTEIYTEHSHQTTVAKTSPSGYYCASGDV---HGNVRIWDTT   88 (311)
T ss_dssp             CCTTCCCCCEECTTSSEEEEEETTEEEEEETTCSS---CCEEECCCSSCEEEEEECTTSSEEEEEET---TSEEEEEESS
T ss_pred             CCCCCeEEEEEcCCCCEEEEEeCCEEEEEECCCCc---eeEEEcCCCCCEEEEEEeCCCCeEecccc---CceEeeeeee
Confidence            34456678999999999999998889999998743   44446789999999999999988777776   9999999987


Q ss_pred             CCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCC
Q psy14511        114 NGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAP  193 (488)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (488)
                      ++.....                                                                         
T Consensus        89 ~~~~~~~-------------------------------------------------------------------------   95 (311)
T d1nr0a1          89 QTTHILK-------------------------------------------------------------------------   95 (311)
T ss_dssp             STTCCEE-------------------------------------------------------------------------
T ss_pred             ccccccc-------------------------------------------------------------------------
Confidence            6542111                                                                         


Q ss_pred             CccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeC-CCCcEEEEECC
Q psy14511        194 SIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNT-CTEYIDLWHEQ  272 (488)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-~~~~i~i~d~~  272 (488)
                                                              ..+.. |..+|.+++|+|+++++++++. .+..+++|+++
T Consensus        96 ----------------------------------------~~~~~-~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~  134 (311)
T d1nr0a1          96 ----------------------------------------TTIPV-FSGPVKDISWDSESKRIAAVGEGRERFGHVFLFD  134 (311)
T ss_dssp             ----------------------------------------EEEEC-SSSCEEEEEECTTSCEEEEEECCSSCSEEEEETT
T ss_pred             ----------------------------------------ccccc-ccCccccccccccccccccccccccccccccccc
Confidence                                                    11112 7788999999999999988832 35679999999


Q ss_pred             cceeeeeeccccccEEEEEe--cCC-EEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeE
Q psy14511        273 EERLIQKLRTHMHQVIAMCW--NGN-LLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTV  348 (488)
Q Consensus       273 ~~~~~~~~~~~~~~v~~~~~--~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i  348 (488)
                      +++....+.+|...|.+++|  +++ .+++|+.|+.|++||+++. ........|..+|++++|+|++++|++++ |+.+
T Consensus       135 ~~~~~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~-~~~~~~~~~~~~i~~v~~~p~~~~l~~~~~d~~v  213 (311)
T d1nr0a1         135 TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPF-KFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTI  213 (311)
T ss_dssp             TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTB-EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred             cccccccccccccccccccccccceeeeccccccccccccccccc-ccccccccccccccccccCccccccccccccccc
Confidence            99999999999999999999  455 5888999999999999975 56777888999999999999999999998 6999


Q ss_pred             EEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCc
Q psy14511        349 KIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADET  428 (488)
Q Consensus       349 ~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~  428 (488)
                      ++||+.+...                            +..+....    ....+|.+.|++++|+|++++|++|+.||.
T Consensus       214 ~~~d~~~~~~----------------------------~~~~~~~~----~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg~  261 (311)
T d1nr0a1         214 VLYNGVDGTK----------------------------TGVFEDDS----LKNVAHSGSVFGLTWSPDGTKIASASADKT  261 (311)
T ss_dssp             EEEETTTCCE----------------------------EEECBCTT----SSSCSSSSCEEEEEECTTSSEEEEEETTSE
T ss_pred             cccccccccc----------------------------cccccccc----cccccccccccccccCCCCCEEEEEeCCCe
Confidence            9999875421                            11221111    123568999999999999999999999999


Q ss_pred             EEEEecCCCCccccccccCC--cceEEeecCCCceEEEEeeecccccceeeEEEEe
Q psy14511        429 ISIWNCFPRDKKRKARQVGS--GSSLEFAILKQPVSLTALLRSRAVEKQQHAIAYT  482 (488)
Q Consensus       429 v~iw~~~~~~~~~~~~~~~~--v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~  482 (488)
                      |+|||+++++..........  ...+.+.+++..+       ..++.+..+.+|..
T Consensus       262 v~iwd~~t~~~~~~l~~~~~~~~~~~~~~~~~~~l-------~s~s~dG~i~~wd~  310 (311)
T d1nr0a1         262 IKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQAL-------VSISANGFINFVNP  310 (311)
T ss_dssp             EEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCE-------EEEETTCCEEEEET
T ss_pred             EEEEECCCCcEEEEEECCCCccceEEEEEecCCEE-------EEEECCCEEEEEeC
Confidence            99999999987754332222  2333444444444       23445666666653

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=6.8e-37  Score=270.99  Aligned_cols=303  Identities=16%  Similarity=0.259  Sum_probs=246.1

Q ss_pred             cccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeee
Q psy14511         73 QVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFE  152 (488)
Q Consensus        73 ~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (488)
                      ...+.+|.++|++|+|+|++++|++++.   |++|++||+.+++.+..+..+...+..+.+.+                 
T Consensus        10 ~~~L~GH~~~I~~l~~sp~~~~l~s~s~---Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~-----------------   69 (317)
T d1vyhc1          10 KYALSGHRSPVTRVIFHPVFSVMVSASE---DATIKVWDYETGDFERTLKGHTDSVQDISFDH-----------------   69 (317)
T ss_dssp             SCEEECCSSCEEEEEECSSSSEEEEEES---SSCEEEEETTTCCCCEEECCCSSCEEEEEECT-----------------
T ss_pred             cEEEcCCCCCeEEEEEcCCCCEEEEEeC---CCeEEEEECCCCCEEEEEeCCCCcEEEEeeec-----------------
Confidence            4468899999999999999988777666   99999999999998877766544332222211                 


Q ss_pred             ccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEE
Q psy14511        153 IDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQL  232 (488)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~  232 (488)
                                                                            ....++.+..++.+..|+....+...
T Consensus        70 ------------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (317)
T d1vyhc1          70 ------------------------------------------------------SGKLLASCSADMTIKLWDFQGFECIR   95 (317)
T ss_dssp             ------------------------------------------------------TSSEEEEEETTSCCCEEETTSSCEEE
T ss_pred             ------------------------------------------------------cccccccccccccccccccccccccc
Confidence                                                                  12345666688999999988877654


Q ss_pred             EEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEE
Q psy14511        233 LVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYD  310 (488)
Q Consensus       233 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d  310 (488)
                      ...  . +...+.++.++|+++.++++ +.|+.+++||+++++.+..+..|...+.++++  +++++++++.|+.+++|+
T Consensus        96 ~~~--~-~~~~~~~~~~~~~~~~~~~~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~~  171 (317)
T d1vyhc1          96 TMH--G-HDHNVSSVSIMPNGDHIVSA-SRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV  171 (317)
T ss_dssp             CCC--C-CSSCEEEEEECSSSSEEEEE-ETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             ccc--c-ccccceeeeccCCCceEEee-ccCcceeEeecccceeeeEEccCCCcceeeecccCCCEEEEEeCCCeEEEEe
Confidence            443  3 78899999999999999999 99999999999999999999999999999999  689999999999999999


Q ss_pred             CcCCCccceeeecCCccEEEEEEccCCcEEEEEec-CeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEE
Q psy14511        311 VRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN-NTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKM  389 (488)
Q Consensus       311 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i  389 (488)
                      +.+. .....+..|...+..++|+|++........ +....                 .....+..+++  ++.|+.|++
T Consensus       172 ~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~--~~~d~~i~~  231 (317)
T d1vyhc1         172 VATK-ECKAELREHRHVVECISWAPESSYSSISEATGSETK-----------------KSGKPGPFLLS--GSRDKTIKM  231 (317)
T ss_dssp             TTTC-CEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC------------------------CCEEEE--EETTSEEEE
T ss_pred             eccc-eeeEEEecCCCCceEEEEeeccccceeeccccceee-----------------eeccCCceeEe--ccCCCEEEE
Confidence            9986 466778889999999999998765543332 22111                 23345667777  788999999


Q ss_pred             EeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccc-cccccCCcceEEeecCCCceEEEEeee
Q psy14511        390 WEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKR-KARQVGSGSSLEFAILKQPVSLTALLR  468 (488)
Q Consensus       390 ~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~-~~~~~~~v~~~~~s~~~~~~~~~~~~~  468 (488)
                      ||+.+++++.++.+|...|.+++|+|++++|++++.||.|++||+.++++.. ...|.++|.+++|+|+++.+       
T Consensus       232 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~V~~~~~s~~~~~l-------  304 (317)
T d1vyhc1         232 WDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV-------  304 (317)
T ss_dssp             EETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCE-------
T ss_pred             EECCCCcEEEEEeCCCCCEEEEEECCCCCEEEEEECCCeEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEE-------
Confidence            9999999999999999999999999999999999999999999999988774 46789999999999999877       


Q ss_pred             cccccceeeEEE
Q psy14511        469 SRAVEKQQHAIA  480 (488)
Q Consensus       469 ~~~~~~~~~~i~  480 (488)
                      +.++.|..+.||
T Consensus       305 ~s~s~Dg~i~iW  316 (317)
T d1vyhc1         305 VTGSVDQTVKVW  316 (317)
T ss_dssp             EEEETTSEEEEE
T ss_pred             EEEeCCCeEEEe
Confidence            335566666665

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=1.6e-35  Score=260.11  Aligned_cols=265  Identities=17%  Similarity=0.242  Sum_probs=209.6

Q ss_pred             ccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCccccccccc
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLS   81 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~   81 (488)
                      +.||++||+|+.||+|++||+++++.+.....+|...|++++|+|+|++++++.|+.+++|+...............|..
T Consensus        21 s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~g~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~  100 (299)
T d1nr0a2          21 SADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSS  100 (299)
T ss_dssp             CTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSS
T ss_pred             CCCCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCCcEEEEEeeccceeecccceeeEEEeccCCccccccccccccccc
Confidence            45899999999999999999999886655556899999999999999988888899999999875443333333455778


Q ss_pred             ceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecc
Q psy14511         82 AVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQ  161 (488)
Q Consensus        82 ~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (488)
                      .+.+++|+|+++.+++ +.   ++.+++|+.....                                             
T Consensus       101 ~~~~~~~s~~g~~~~~-~~---~~~i~~~~~~~~~---------------------------------------------  131 (299)
T d1nr0a2         101 QPLGLAVSADGDIAVA-AC---YKHIAIYSHGKLT---------------------------------------------  131 (299)
T ss_dssp             CEEEEEECTTSSCEEE-EE---SSEEEEEETTEEE---------------------------------------------
T ss_pred             cccccccccccccccc-cc---ccccccccccccc---------------------------------------------
Confidence            8999999999976544 44   7789999842111                                             


Q ss_pred             ccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCC
Q psy14511        162 SKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDN  241 (488)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~  241 (488)
                                                                                             ...    ..
T Consensus       132 -----------------------------------------------------------------------~~~----~~  136 (299)
T d1nr0a2         132 -----------------------------------------------------------------------EVP----IS  136 (299)
T ss_dssp             -----------------------------------------------------------------------EEE----CS
T ss_pred             -----------------------------------------------------------------------ccc----cc
Confidence                                                                                   000    33


Q ss_pred             CceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeee-eeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCc--
Q psy14511        242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQ-KLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSD--  316 (488)
Q Consensus       242 ~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~-~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~--  316 (488)
                      ..+.+++|+|++++++++ +.++.|++||+++++... ....|...|.+++|  +++++++++.|+.|++||+.++..  
T Consensus       137 ~~~~~~~~s~~~~~l~~g-~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~  215 (299)
T d1nr0a2         137 YNSSCVALSNDKQFVAVG-GQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELA  215 (299)
T ss_dssp             SCEEEEEECTTSCEEEEE-ETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEES
T ss_pred             cccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            357789999999999998 999999999998766543 34568899999999  689999999999999999987543  


Q ss_pred             cceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccc-------eeeeeecCCCCEEEEEccCCCCeEE
Q psy14511        317 YPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLG-------LIVPKLKREGRELVTSHGKQDCSLK  388 (488)
Q Consensus       317 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~-------~~~~~~~~~~~~l~~~~g~~~~~i~  388 (488)
                      ....+..|..+|++++|+|++++|++++ |+.|++||+++........       .....+++++++|++  ++.|+.|+
T Consensus       216 ~~~~~~~h~~~v~~l~~s~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s--~s~D~~i~  293 (299)
T d1nr0a2         216 HTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVS--AGQDSNIK  293 (299)
T ss_dssp             CCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEETTEEEE--EETTSCEE
T ss_pred             ccccccccccccccccccccccceEEEcCCCEEEEEECCCCCcceEEEecCCCCCcEEEEEECCCCEEEE--EeCCCEEE
Confidence            2345677899999999999999999999 6999999998765433221       112256677888888  67899999


Q ss_pred             EEeCC
Q psy14511        389 MWEYP  393 (488)
Q Consensus       389 i~d~~  393 (488)
                      +||+.
T Consensus       294 iWdl~  298 (299)
T d1nr0a2         294 FWNVP  298 (299)
T ss_dssp             EEECC
T ss_pred             EEecc
Confidence            99974

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.7e-35  Score=265.08  Aligned_cols=299  Identities=16%  Similarity=0.245  Sum_probs=224.5

Q ss_pred             ceeecccCceE-EEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccce
Q psy14511         29 PTAITREGDVV-CGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQT  106 (488)
Q Consensus        29 ~~~~~~h~~~V-~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~  106 (488)
                      ..+|+||.+.| +|++  +++++||+|+ |++|+|||+.++   +.+..+.+|.++|.+++|+|++ +|++++.   |++
T Consensus         5 ~~tL~GH~~~vitc~~--~~~~~l~tgs~Dg~i~vWd~~~~---~~~~~l~~H~~~V~~l~~s~~~-~l~s~s~---D~~   75 (355)
T d1nexb2           5 RTTLRGHMTSVITCLQ--FEDNYVITGADDKMIRVYDSINK---KFLLQLSGHDGGVWALKYAHGG-ILVSGST---DRT   75 (355)
T ss_dssp             EEEEECCSSSCEEEEE--EETTEEEEEETTTEEEEEETTTT---EEEEEEECCSSCEEEEEEETTT-EEEEEET---TCC
T ss_pred             cEEECCcCCCcEEEEE--ECCCEEEEEeCCCeEEEEECCCC---cEEEEEECCCCCEEEEEEcCCC-EEEEEec---ccc
Confidence            45789998875 5555  5688999998 999999999874   4556688999999999999865 6666665   999


Q ss_pred             EEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCC
Q psy14511        107 VRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKP  186 (488)
Q Consensus       107 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (488)
                      |++|++...+.........                                                             
T Consensus        76 i~iw~~~~~~~~~~~~~~~-------------------------------------------------------------   94 (355)
T d1nexb2          76 VRVWDIKKGCCTHVFEGHN-------------------------------------------------------------   94 (355)
T ss_dssp             EEEEETTTTEEEEEECCCS-------------------------------------------------------------
T ss_pred             ccccccccccccccccccc-------------------------------------------------------------
Confidence            9999998776543322110                                                             


Q ss_pred             ceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcE
Q psy14511        187 ERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYI  266 (488)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i  266 (488)
                                                                           +........+.++++.++++ +.|+.|
T Consensus        95 -----------------------------------------------------~~~~~~~~~~~~~~~~~~~~-~~d~~i  120 (355)
T d1nexb2          95 -----------------------------------------------------STVRCLDIVEYKNIKYIVTG-SRDNTL  120 (355)
T ss_dssp             -----------------------------------------------------SCEEEEEEEEETTEEEEEEE-ETTSEE
T ss_pred             -----------------------------------------------------ccccccccccccccceeeee-cCCCcE
Confidence                                                                 22233444556666666666 677777


Q ss_pred             EEEECCcceee-----------------------eeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCccceeeec
Q psy14511        267 DLWHEQEERLI-----------------------QKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITR  323 (488)
Q Consensus       267 ~i~d~~~~~~~-----------------------~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~  323 (488)
                      ++||+.+....                       .....|...+.....+++.++++..|+.+++||+++. ........
T Consensus       121 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~~i~~~d~~~~-~~~~~~~~  199 (355)
T d1nexb2         121 HVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQM-KCLYILSG  199 (355)
T ss_dssp             EEEECCC-----------CCCEEESCTTTCTTEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTT-EEEEEECC
T ss_pred             EEEEccCCceeccccccceeccceeccccccceeeeeeeccccccccccccceeeeecccceeeeeecccc-cceeeeec
Confidence            77776553322                       2223456667777778999999999999999999875 45667777


Q ss_pred             CCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCccccee---eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeE
Q psy14511        324 EGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLI---VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIE  399 (488)
Q Consensus       324 ~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~  399 (488)
                      +...+.++.|+|++.++++++ |+.|++||++++.....+...   +.++.++++++++  ++.||.|++||+.++..  
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~~~~~l~~--~~~dg~i~iwd~~~~~~--  275 (355)
T d1nexb2         200 HTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVS--AAADGSIRGWDANDYSR--  275 (355)
T ss_dssp             CSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCCEEEEECCCSSCCCEEEECSSEEEE--ECTTSEEEEEETTTCCE--
T ss_pred             cccccccccccccceeeecccccceEEeeeccccccccccccccccccccccccceeee--eecccccccccccccce--
Confidence            888899999999999999998 699999999987654444322   3366667888888  78999999999988764  


Q ss_pred             EEeeccccEEEE-EEcCCCCEEEEEeCCCcEEEEecCCCCcc--ccccccCCcceEEeecC
Q psy14511        400 ELKIHQERILSA-VLSPDQTCVAAASADETISIWNCFPRDKK--RKARQVGSGSSLEFAIL  457 (488)
Q Consensus       400 ~~~~~~~~v~~~-~~s~~~~~l~t~~~dg~v~iw~~~~~~~~--~~~~~~~~v~~~~~s~~  457 (488)
                      .+..|...+..+ .+++++++|++| .||.|++||+++++.+  ....|..+|.+++|+|+
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~l~~g-~d~~i~vwd~~tg~~~~~~~~~~~~~V~~v~~~~~  335 (355)
T d1nexb2         276 KFSYHHTNLSAITTFYVSDNILVSG-SENQFNIYNLRSGKLVHANILKDADQIWSVNFKGK  335 (355)
T ss_dssp             EEEEECTTCCCCCEEEECSSEEEEE-ETTEEEEEETTTCCBCCSCTTTTCSEEEEEEEETT
T ss_pred             ecccccCCceEEEEEcCCCCEEEEE-eCCEEEEEECCCCCEEEEEecCCCCCEEEEEEcCC
Confidence            445576666665 456677776665 5899999999999876  34678889999999985

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=3.5e-35  Score=268.11  Aligned_cols=320  Identities=19%  Similarity=0.270  Sum_probs=237.3

Q ss_pred             EEEecCCeEEEEeccccCcCC-CcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccc
Q psy14511         51 LASGSNNTVKIWDFRQLDAKR-PQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQAN  129 (488)
Q Consensus        51 las~~d~~i~vwd~~~~~~~~-~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~  129 (488)
                      +....++...+|+....+... .+....+|++.|++|+|+|||++| ++|+   |++|++||+.+++.+..+..+.....
T Consensus        32 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~H~~~V~~l~fs~dg~~l-asg~---d~~i~iW~~~~~~~~~~~~~~~~~~~  107 (388)
T d1erja_          32 LKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYL-ATGC---NKTTQVYRVSDGSLVARLSDDSAANK  107 (388)
T ss_dssp             SEEECSSCEEEECTTSCCCEEEEEEEEEECSSCCCEEEECTTSSEE-EEEC---BSCEEEEETTTCCEEEEECC------
T ss_pred             cccCCCCcEEEeCCCCCcceeeeeEeeCCCCCcEEEEEECCCCCEE-EEEe---CCeEEEEEecccceEeeecccccccc
Confidence            333348889999976433221 122234699999999999999865 5566   99999999999987766554311000


Q ss_pred             cccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCC
Q psy14511        130 DETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYH  209 (488)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (488)
                      .                                                                               
T Consensus       108 ~-------------------------------------------------------------------------------  108 (388)
T d1erja_         108 D-------------------------------------------------------------------------------  108 (388)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             c-------------------------------------------------------------------------------
Confidence            0                                                                               


Q ss_pred             cEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEE
Q psy14511        210 DTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIA  289 (488)
Q Consensus       210 ~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~  289 (488)
                                        ........... +...|++++|+|++++|+++ +.||.|++||...++.+..+.+|...|.+
T Consensus       109 ------------------~~~~~~~~~~~-~~~~V~~l~~s~~~~~l~s~-~~dg~v~i~~~~~~~~~~~~~~h~~~v~~  168 (388)
T d1erja_         109 ------------------PENLNTSSSPS-SDLYIRSVCFSPDGKFLATG-AEDRLIRIWDIENRKIVMILQGHEQDIYS  168 (388)
T ss_dssp             ----------------------------C-CCCBEEEEEECTTSSEEEEE-ETTSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred             ------------------ccccccccccC-CCCCEEEEEECCCCCcceec-ccccccccccccccccccccccccccccc
Confidence                              00001111222 78889999999999999999 99999999999999999999999999999


Q ss_pred             EEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccce--
Q psy14511        290 MCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGL--  364 (488)
Q Consensus       290 ~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~--  364 (488)
                      +.+  ++..+++++.++.+++||.++.. .......+...+....+.+++++|++++ |+.|++||..+......+..  
T Consensus       169 ~~~~~~~~~~~~~~~~~~i~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~  247 (388)
T d1erja_         169 LDYFPSGDKLVSGSGDRTVRIWDLRTGQ-CSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSEN  247 (388)
T ss_dssp             EEECTTSSEEEEEETTSEEEEEETTTTE-EEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC---
T ss_pred             cccccccccccccccceeeeeeeccccc-cccccccccccccccccCCCCCeEEEEcCCCeEEEeecccCccceeecccc
Confidence            999  67899999999999999998753 4444445554444444445889999998 69999999987754332211  


Q ss_pred             ----------eeeeecCCCCEEEEEccCCCCeEEEEeCCCcc------------eeEEEeeccccEEEEEEcCCCCEEEE
Q psy14511        365 ----------IVPKLKREGRELVTSHGKQDCSLKMWEYPRLH------------LIEELKIHQERILSAVLSPDQTCVAA  422 (488)
Q Consensus       365 ----------~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~------------~~~~~~~~~~~v~~~~~s~~~~~l~t  422 (488)
                                ....|+|+++++++  ++.|+.|++||+.+++            .......|...|.+++|+|++++|++
T Consensus       248 ~~~~~h~~~v~~l~~s~~~~~l~s--~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s  325 (388)
T d1erja_         248 ESGTGHKDSVYSVVFTRDGQSVVS--GSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILS  325 (388)
T ss_dssp             ---CCCSSCEEEEEECTTSSEEEE--EETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEE
T ss_pred             ccccCCCCCEEEEEECCCCCEEEE--EECCCcEEEEeccCCccccccccccccceeeecccccceEEEEEECCCCCEEEE
Confidence                      12289999999998  7889999999997643            33455678899999999999999999


Q ss_pred             EeCCCcEEEEecCCCCcc-ccccccCCcceEEee------cCCCceEEEEeeecccccceeeEEEEee
Q psy14511        423 ASADETISIWNCFPRDKK-RKARQVGSGSSLEFA------ILKQPVSLTALLRSRAVEKQQHAIAYTV  483 (488)
Q Consensus       423 ~~~dg~v~iw~~~~~~~~-~~~~~~~~v~~~~~s------~~~~~~~~~~~~~~~~~~~~~~~i~~~~  483 (488)
                      |+.||.|++||+.++++. ....|.+.|.+++++      |++..+       +.++.|..+.||..+
T Consensus       326 g~~dg~i~vwd~~~~~~~~~l~~H~~~V~~~~~~~~~~~spd~~~l-------~s~s~Dg~I~iW~~~  386 (388)
T d1erja_         326 GSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVF-------ATGSGDCKARIWKYK  386 (388)
T ss_dssp             EETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEE-------EEEETTSEEEEEEEE
T ss_pred             EeCCCEEEEEECCCCcEEEEEeCCCCCEEEEEEecCcccCCCCCEE-------EEEeCCCEEEEEeee
Confidence            999999999999999887 456789999988764      454444       456678888888764

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=2e-35  Score=267.40  Aligned_cols=243  Identities=17%  Similarity=0.218  Sum_probs=189.1

Q ss_pred             cCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecC
Q psy14511         35 EGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSM  113 (488)
Q Consensus        35 h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~  113 (488)
                      +.++|+|++|+|||++||+|+ |+.|+|||.++++ ...+..+.+|.++|.+++|+|++++|++++.   |++|++||+.
T Consensus         6 ~~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~-~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~---D~~i~vWd~~   81 (371)
T d1k8kc_           6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNK-WVQVHELKEHNGQVTGVDWAPDSNRIVTCGT---DRNAYVWTLK   81 (371)
T ss_dssp             CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTE-EEEEEEEECCSSCEEEEEEETTTTEEEEEET---TSCEEEEEEE
T ss_pred             CCCCeEEEEECCCCCEEEEEeCCCEEEEEECCCCC-EEEEEEecCCCCCEEEEEECCCCCEEEEEEC---CCeEEEEeec
Confidence            346899999999999999998 8999999997643 3345667899999999999999998887776   9999999987


Q ss_pred             CCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCC
Q psy14511        114 NGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAP  193 (488)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (488)
                      ++....                                                                          
T Consensus        82 ~~~~~~--------------------------------------------------------------------------   87 (371)
T d1k8kc_          82 GRTWKP--------------------------------------------------------------------------   87 (371)
T ss_dssp             TTEEEE--------------------------------------------------------------------------
T ss_pred             cccccc--------------------------------------------------------------------------
Confidence            654221                                                                          


Q ss_pred             CccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCc
Q psy14511        194 SIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE  273 (488)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~  273 (488)
                                                             .....+ +...|++++|+|+++.++++ +.++.+++|++..
T Consensus        88 ---------------------------------------~~~~~~-~~~~v~~i~~~p~~~~l~~~-s~d~~i~i~~~~~  126 (371)
T d1k8kc_          88 ---------------------------------------TLVILR-INRAARCVRWAPNEKKFAVG-SGSRVISICYFEQ  126 (371)
T ss_dssp             ---------------------------------------EEECCC-CSSCEEEEEECTTSSEEEEE-ETTSSEEEEEEET
T ss_pred             ---------------------------------------cccccc-ccccccccccccccccceee-cccCcceeeeeec
Confidence                                                   112222 67789999999999999999 9999999998765


Q ss_pred             cee----eeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCc-----------------cceeeecCCccEEE
Q psy14511        274 ERL----IQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSD-----------------YPTAITREGDVVCG  330 (488)
Q Consensus       274 ~~~----~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~-----------------~~~~~~~~~~~i~~  330 (488)
                      ...    ......|...|.+++|  ++++|++|+.|+.+++||......                 .......|...|.+
T Consensus       127 ~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  206 (371)
T d1k8kc_         127 ENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHG  206 (371)
T ss_dssp             TTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEE
T ss_pred             ccccccccccccccccccccccccccccceeccccCcEEEEEeeccCccccccccccccccccceeeeeeccCccCcEEE
Confidence            432    3345578899999999  689999999999999999865321                 12233456666777


Q ss_pred             EEEccCCcEEEEEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEE
Q psy14511        331 LKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILS  410 (488)
Q Consensus       331 ~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~  410 (488)
                      ++|+|++++|++++                                      .|+.|++||+.+++.+..+..|..+|.+
T Consensus       207 ~~~s~~g~~l~s~~--------------------------------------~d~~i~iwd~~~~~~~~~~~~~~~~v~s  248 (371)
T d1k8kc_         207 VCFSANGSRVAWVS--------------------------------------HDSTVCLADADKKMAVATLASETLPLLA  248 (371)
T ss_dssp             EEECSSSSEEEEEE--------------------------------------TTTEEEEEEGGGTTEEEEEECSSCCEEE
T ss_pred             EEeecccccccccc--------------------------------------cCCcceEEeeecccceeeeeccccccee
Confidence            77777777777664                                      3455555555566778888899999999


Q ss_pred             EEEcCCCCEEEEEeCCCcEEEEecC
Q psy14511        411 AVLSPDQTCVAAASADETISIWNCF  435 (488)
Q Consensus       411 ~~~s~~~~~l~t~~~dg~v~iw~~~  435 (488)
                      ++|+||+++|++|+ |+.+++|...
T Consensus       249 ~~fs~d~~~la~g~-d~~~~~~~~~  272 (371)
T d1k8kc_         249 VTFITESSLVAAGH-DCFPVLFTYD  272 (371)
T ss_dssp             EEEEETTEEEEEET-TSSCEEEEEE
T ss_pred             eeecCCCCEEEEEc-CCceEEEEee
Confidence            99999998887665 7777776654

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.2e-33  Score=252.76  Aligned_cols=270  Identities=17%  Similarity=0.284  Sum_probs=215.0

Q ss_pred             ccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCC-Cccccccc
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKR-PQVNNQCH   79 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~-~~~~~~~h   79 (488)
                      +.|+++||+|+.||+|+|||+.+++.+ ..+..|...|.+++|+|++++|++++ |+.+++|+........ ....+.+|
T Consensus        64 s~~~~~l~sgs~Dg~v~iWd~~~~~~~-~~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~  142 (340)
T d1tbga_          64 GTDSRLLVSASQDGKLIIWDSYTTNKV-HAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGH  142 (340)
T ss_dssp             CTTSSEEEEEETTTEEEEEETTTTEEE-EEEECSCSCEEEEEECTTSSEEEEEETTCCEEEEESSSSCSCCCEEEEECCC
T ss_pred             CCCCCEEEEEECCCceeeeecccceeE-EEEecccccEEeeEeeccceeeeeecccceeecccccccccccccceecccc
Confidence            348999999999999999999998854 66889999999999999999999998 9999999987643322 23345667


Q ss_pred             ccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeecccccee
Q psy14511         80 LSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVL  159 (488)
Q Consensus        80 ~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (488)
                      ...........+. .+.....   |.....+.................+...                            
T Consensus       143 ~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------  190 (340)
T d1tbga_         143 TGYLSCCRFLDDN-QIVTSSG---DTTCALWDIETGQQTTTFTGHTGDVMSL----------------------------  190 (340)
T ss_dssp             SSCEEEEEEEETT-EEEEEET---TTEEEEEETTTTEEEEEEECCSSCEEEE----------------------------
T ss_pred             ccccccccccccc-ccccccc---cccccccccccccccccccccceeEeee----------------------------
Confidence            7777666666554 5555555   8888888877665444333321111100                            


Q ss_pred             ccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCC
Q psy14511        160 NQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTY  239 (488)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~  239 (488)
                                                                 ........+++++.|+.|++||+.+++....+..   
T Consensus       191 -------------------------------------------~~~~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~~---  224 (340)
T d1tbga_         191 -------------------------------------------SLAPDTRLFVSGACDASAKLWDVREGMCRQTFTG---  224 (340)
T ss_dssp             -------------------------------------------EECTTSSEEEEEETTTEEEEEETTTTEEEEEECC---
T ss_pred             -------------------------------------------ccccccceeEEeecCceEEEEECCCCcEEEEEeC---
Confidence                                                       0111234567778999999999999987766553   


Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeee--ccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCC
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKL--RTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHS  315 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~--~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~  315 (488)
                      |...|++++|+|++++++++ +.|+.|++||+........+  ..+...+.+++|  ++++|++|+.||.|++||+.++ 
T Consensus       225 h~~~i~~v~~~p~~~~l~s~-s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~i~iwd~~~~-  302 (340)
T d1tbga_         225 HESDINAICFFPNGNAFATG-SDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA-  302 (340)
T ss_dssp             CSSCEEEEEECTTSSEEEEE-ETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECSSSCEEEEEETTSCEEEEETTTC-
T ss_pred             CCCCeEEEEECCCCCEEEEE-eCCCeEEEEeecccccccccccccccCceEEEEECCCCCEEEEEECCCEEEEEECCCC-
Confidence            88999999999999999999 99999999999988777665  456778999999  6899999999999999999886 


Q ss_pred             ccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEE
Q psy14511        316 DYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWD  352 (488)
Q Consensus       316 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd  352 (488)
                      .....+.+|..+|++++|+|++++|++++ ||.|+|||
T Consensus       303 ~~~~~~~~H~~~V~~l~~s~d~~~l~s~s~Dg~v~iWd  340 (340)
T d1tbga_         303 DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             CEEEEECCCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             cEEEEEcCCCCCEEEEEEeCCCCEEEEEccCCEEEEeC
Confidence            57788899999999999999999999998 69999997

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-33  Score=251.22  Aligned_cols=297  Identities=17%  Similarity=0.272  Sum_probs=224.9

Q ss_pred             ccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccc
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHL   80 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~   80 (488)
                      ++||++||+|+.||+|+|||+.+++.+ ..+.+|.+.|.+++|+|+  +|++++ |+.+++|+......   ......+.
T Consensus        24 ~~~g~~l~sgs~Dg~i~vWd~~~~~~~-~~~~~h~~~V~~v~~~~~--~l~s~s~D~~~~~~~~~~~~~---~~~~~~~~   97 (342)
T d2ovrb2          24 QFCGNRIVSGSDDNTLKVWSAVTGKCL-RTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGEC---IHTLYGHT   97 (342)
T ss_dssp             EEETTEEEEEETTSCEEEEETTTCCEE-EECCCCSSCEEEEEEETT--EEEEEETTSCEEEEETTTTEE---EEEECCCS
T ss_pred             EECCCEEEEEeCCCeEEEEECCCCCEE-EEEeCCCCCEEEEEeCCC--ccccceecccccccccccccc---eecccccc
Confidence            568999999999999999999998854 678999999999999975  899988 99999999876332   22233344


Q ss_pred             cceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceec
Q psy14511         81 SAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLN  160 (488)
Q Consensus        81 ~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (488)
                      ..+....+.+  ..+.....   |+.+.+|+..+++....+......                                 
T Consensus        98 ~~~~~~~~~~--~~~~~~~~---d~~i~~~~~~~~~~~~~~~~~~~~---------------------------------  139 (342)
T d2ovrb2          98 STVRCMHLHE--KRVVSGSR---DATLRVWDIETGQCLHVLMGHVAA---------------------------------  139 (342)
T ss_dssp             SCEEEEEEET--TEEEEEET---TSEEEEEESSSCCEEEEEECCSSC---------------------------------
T ss_pred             eeEeeeeccc--cccccccc---ceeEEEeecccccceeeeeccccc---------------------------------
Confidence            5555555443  34555555   999999999888765544332110                                 


Q ss_pred             cccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCC
Q psy14511        161 QSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYD  240 (488)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~  240 (488)
                                                              ..........++.++.++.+++||....+....+..   |
T Consensus       140 ----------------------------------------~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~---~  176 (342)
T d2ovrb2         140 ----------------------------------------VRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQG---H  176 (342)
T ss_dssp             ----------------------------------------EEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEECC---C
T ss_pred             ----------------------------------------ceeeccccceeeeecCCCeEEEeecccceeeEEEcC---c
Confidence                                                    001122345788889999999999998876655543   5


Q ss_pred             CCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCcccee
Q psy14511        241 NAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTA  320 (488)
Q Consensus       241 ~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~  320 (488)
                      ...+...  .+++..++++ +.||.|++||++.++.+..+..|...+.+++++++++++++.|+.|++||+...+. ...
T Consensus       177 ~~~~~~~--~~~~~~l~s~-~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~s~d~~i~iwd~~~~~~-~~~  252 (342)
T d2ovrb2         177 TNRVYSL--QFDGIHVVSG-SLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQC-LQT  252 (342)
T ss_dssp             SSCEEEE--EECSSEEEEE-ETTSCEEEEETTTCCEEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCE-EEE
T ss_pred             ccccccc--cCCCCEEEEE-eCCCeEEEeecccceeeeEecccccceeEEecCCCEEEEEcCCCEEEEEecccccc-ccc
Confidence            5555554  4567889988 99999999999999999999999999999999999999999999999999987643 333


Q ss_pred             ee---cCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccce--------ee--eeecCCCCEEEEEccCCCC-
Q psy14511        321 IT---REGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGL--------IV--PKLKREGRELVTSHGKQDC-  385 (488)
Q Consensus       321 ~~---~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~--------~~--~~~~~~~~~l~~~~g~~~~-  385 (488)
                      +.   .|...+.++.+  +++++++++ ||.|++||+++++..+.+..        .+  .+|+|++..+++  |+.|| 
T Consensus       253 ~~~~~~~~~~~~~~~~--~~~~~~s~s~Dg~i~iwd~~tg~~i~~~~~~~~~~~~~~v~~v~~s~~~~~la~--g~~dGt  328 (342)
T d2ovrb2         253 LQGPNKHQSAVTCLQF--NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAV--GSRNGT  328 (342)
T ss_dssp             ECSTTSCSSCEEEEEE--CSSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEE--ECSSSS
T ss_pred             ccccceeeeceeeccc--CCCeeEEEcCCCEEEEEECCCCCEEEEEecccCCCCCCCEEEEEECCCCCEEEE--EeCCCC
Confidence            33   35556666665  457899998 69999999998866544321        12  288999988888  67777 


Q ss_pred             ---eEEEEeCC
Q psy14511        386 ---SLKMWEYP  393 (488)
Q Consensus       386 ---~i~i~d~~  393 (488)
                         .|++||+.
T Consensus       329 ~~~~l~~~Df~  339 (342)
T d2ovrb2         329 EETKLLVLDFD  339 (342)
T ss_dssp             SCCEEEEEECC
T ss_pred             CeeEEEEEeCC
Confidence               49999986

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=6.7e-34  Score=248.12  Aligned_cols=276  Identities=16%  Similarity=0.201  Sum_probs=212.4

Q ss_pred             cceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccce
Q psy14511         28 YPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQT  106 (488)
Q Consensus        28 ~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~  106 (488)
                      +.+.+.+|.++|++++|+|    |++|+ ||+|++||+.++        ..+|...|.++.|++++ .+++.+.   |++
T Consensus         5 ~i~~l~gH~~~I~~l~~s~----l~sgs~Dg~v~~Wd~~~~--------~~~h~~~V~~~~~~~~~-~~~s~s~---D~~   68 (287)
T d1pgua2           5 VLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSM--------HQDHSNLIVSLDNSKAQ-EYSSISW---DDT   68 (287)
T ss_dssp             EEEEECCCSSCEEEEETTT----TEEEETTSCEEETTTTEE--------ECCCCSCEEEEECCSTT-CCEEEET---TTE
T ss_pred             eeEEECCCCCceEEEEECc----EEEEeCCCeEEEEECCCC--------CCCCCCCEEEEEecCCC-eEEEEee---ccc
Confidence            4467899999999999998    88998 999999998763        24699999999999765 5666665   999


Q ss_pred             EEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCC
Q psy14511        107 VRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKP  186 (488)
Q Consensus       107 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (488)
                      +++|++...+....                                                                  
T Consensus        69 v~~w~~~~~~~~~~------------------------------------------------------------------   82 (287)
T d1pgua2          69 LKVNGITKHEFGSQ------------------------------------------------------------------   82 (287)
T ss_dssp             EEETTEEEEECSSC------------------------------------------------------------------
T ss_pred             cccccccccccccc------------------------------------------------------------------
Confidence            99999754321000                                                                  


Q ss_pred             ceeecCCCccccceeeeeeeC-CCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCc
Q psy14511        187 ERILEAPSIINDFYTSGLDWG-YHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEY  265 (488)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~  265 (488)
                                    ...+.+. ++.+++.+.++.+.+|+..+++....+..    ...+  .++++++..+++++..++.
T Consensus        83 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~~~v~~~~~~~  142 (287)
T d1pgua2          83 --------------PKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRL----NSPG--SAVSLSQNYVAVGLEEGNT  142 (287)
T ss_dssp             --------------EEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEEC----SSCE--EEEEECSSEEEEEETTTSC
T ss_pred             --------------eeeeeeccCCceEEEeecccceeeeccceeeeeeccc----ccee--eeeeccCcceeeeccccce
Confidence                          0001111 24566777888999999999988777664    2333  4566778888888455668


Q ss_pred             EEEEECCcceeeeeec-cccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEE
Q psy14511        266 IDLWHEQEERLIQKLR-THMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLAS  342 (488)
Q Consensus       266 i~i~d~~~~~~~~~~~-~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~  342 (488)
                      +++|++...+....+. .|...+.+++|  ++.+|++|+.||.|++||+.++......+..|..+|.+++|+|++.....
T Consensus       143 v~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~  222 (287)
T d1pgua2         143 IQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANE  222 (287)
T ss_dssp             EEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC-----
T ss_pred             eeeeeccccceeeeeeeccCCceeEEEeccCccccccccccccccceeecccccccccccccccccceeeeccccccccc
Confidence            9999998766655554 47788999999  68999999999999999999875555567889999999999998865543


Q ss_pred             EecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCC-cceeEEEeeccccEEEEEEcCCCCEEE
Q psy14511        343 GSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPR-LHLIEELKIHQERILSAVLSPDQTCVA  421 (488)
Q Consensus       343 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~  421 (488)
                      .                          .+++.++++  |+.|++|++||+++ .+.+..+.+|.+.|++++|+|++ .|+
T Consensus       223 ~--------------------------~~~~~~l~s--gs~D~~i~iw~~~~~~~~~~~~~~h~~~V~~v~~~~~~-~l~  273 (287)
T d1pgua2         223 E--------------------------EIEEDLVAT--GSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPS-TLV  273 (287)
T ss_dssp             ---------------------------CCSCCEEEE--EETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETT-EEE
T ss_pred             c--------------------------cCCCCeeEe--ecCCCeEEEEECCCCCeEEEEeCCCCCCeEEEEECCCC-EEE
Confidence            3                          345667777  78899999999876 55677788999999999999986 588


Q ss_pred             EEeCCCcEEEEec
Q psy14511        422 AASADETISIWNC  434 (488)
Q Consensus       422 t~~~dg~v~iw~~  434 (488)
                      +++.||.|++|++
T Consensus       274 s~g~D~~v~iW~i  286 (287)
T d1pgua2         274 SSGADACIKRWNV  286 (287)
T ss_dssp             EEETTSCEEEEEE
T ss_pred             EEECCCeEEEEEE
Confidence            9999999999996

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.7e-33  Score=249.61  Aligned_cols=283  Identities=13%  Similarity=0.188  Sum_probs=208.8

Q ss_pred             eEEEEEEccCCcEEEEecCC--eEEEEeccccCcCCCccccccc-ccceeEEEEec--CCCeEEeeeCCcccceEEEEec
Q psy14511         38 VVCGLKWSPNGRYLASGSNN--TVKIWDFRQLDAKRPQVNNQCH-LSAVKAIAWCP--WEPTLLATGGGICDQTVRLWNS  112 (488)
Q Consensus        38 ~V~~l~~sp~g~~las~~d~--~i~vwd~~~~~~~~~~~~~~~h-~~~v~~l~~~~--~~~~l~~~~~~~~d~~i~vwd~  112 (488)
                      .+++++|+|+|+.||.+++.  .|+.|+..... ...+..+.+| ...|++++|+|  +++++++++.   ||+|++||+
T Consensus        19 ~~t~l~~~~~~~~la~~~~~~~~i~~~~~~~~~-~~~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~---Dg~i~iWd~   94 (325)
T d1pgua1          19 FTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSK-VPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDE---SGKVIVWGW   94 (325)
T ss_dssp             CCCCCEEETTTTEEEEEETTEEEEEECCSSCCS-SCSEEEECTTTTSCEEEEEECSSTTCCEEEEEET---TSEEEEEEE
T ss_pred             CeEEEEECCCCCEEEEEeCCCEEEEEEeCCCCC-ccceEEEeCCCCCCEEEEEEeeCCCCCEEEEEeC---CCCEEEeee
Confidence            46789999999999998743  45666654322 2334456666 46899999998  4555545444   999999998


Q ss_pred             CCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecC
Q psy14511        113 MNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEA  192 (488)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (488)
                      ..++....+...                                                                    
T Consensus        95 ~~~~~~~~~~~~--------------------------------------------------------------------  106 (325)
T d1pgua1          95 TFDKESNSVEVN--------------------------------------------------------------------  106 (325)
T ss_dssp             EEEGGGTEEEEE--------------------------------------------------------------------
T ss_pred             cCCcceeeeecc--------------------------------------------------------------------
Confidence            765532222111                                                                    


Q ss_pred             CCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEe-CCCCcEEEEEC
Q psy14511        193 PSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTN-TCTEYIDLWHE  271 (488)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~~~~~i~i~d~  271 (488)
                                                           ......  . +..+|.+++|+++++++++++ +.++.+.+|+.
T Consensus       107 -------------------------------------~~~~~~--~-~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~  146 (325)
T d1pgua1         107 -------------------------------------VKSEFQ--V-LAGPISDISWDFEGRRLCVVGEGRDNFGVFISW  146 (325)
T ss_dssp             -------------------------------------EEEEEE--C-CSSCEEEEEECTTSSEEEEEECCSSCSEEEEET
T ss_pred             -------------------------------------cccccc--c-ccCcEEEEEECCCCCccceeeccccceEEEEee
Confidence                                                 001111  1 778899999999999988763 34778999999


Q ss_pred             CcceeeeeeccccccEEEEEe--cC-CEEEEeecCCeEEEEECcCCCcc--ceeeecCCccEEEEEEccC-CcEEEEEe-
Q psy14511        272 QEERLIQKLRTHMHQVIAMCW--NG-NLLSCGTIGGNILHYDVRTHSDY--PTAITREGDVVCGLKWSPN-GRYLASGS-  344 (488)
Q Consensus       272 ~~~~~~~~~~~~~~~v~~~~~--~~-~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~~~i~~~~~s~~-~~~l~~~~-  344 (488)
                      ++++.+..+.+|...+.+++|  ++ ..+++++.|+.+++||....+..  ......|...|.+++|+|+ +++|++++ 
T Consensus       147 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~  226 (325)
T d1pgua1         147 DSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGS  226 (325)
T ss_dssp             TTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEET
T ss_pred             cccccceeeeecccccccccccccccceEEEeecccccccccccccccceecccccCCCCccEEeeeccccceecccccc
Confidence            999999999999999999999  33 45788999999999998765422  2224467788999999996 68888888 


Q ss_pred             cCeEEEEECCCCCCCcccceee-----eeec---CCCCEEEEEccCCCCeEEEEeCCCcceeEEEeecccc--EEEEEEc
Q psy14511        345 NNTVKIWDFRQLDAKRPLGLIV-----PKLK---REGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQER--ILSAVLS  414 (488)
Q Consensus       345 d~~i~iwd~~~~~~~~~~~~~~-----~~~~---~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~--v~~~~~s  414 (488)
                      |+.|++||+++++....+....     ..|+   |++++|++  ++.|+.|+|||+++++++..+..|...  +..+++.
T Consensus       227 d~~i~iwd~~~~~~~~~l~~~~~~v~~~~~s~~~~dg~~l~s--~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  304 (325)
T d1pgua1         227 DRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFAT--VGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVV  304 (325)
T ss_dssp             TCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEE--EETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEE
T ss_pred             ccceeeeeeccccccccccccccccccceeeeeccCCCEEEE--EeCCCeEEEEECCCCCEEEEEEecCCcccCeEEEEE
Confidence            6999999999886554443221     1343   78999998  789999999999999999988776543  3344443


Q ss_pred             CC-CCEEEEEeCCCcEEEEec
Q psy14511        415 PD-QTCVAAASADETISIWNC  434 (488)
Q Consensus       415 ~~-~~~l~t~~~dg~v~iw~~  434 (488)
                      +. +.+|++++.||.|++||+
T Consensus       305 ~~~~~~l~s~s~dg~i~vwdl  325 (325)
T d1pgua1         305 ATGNGRIISLSLDGTLNFYEL  325 (325)
T ss_dssp             EEETTEEEEEETTSCEEEEET
T ss_pred             ECCCCEEEEEECCCEEEEEEC
Confidence            32 347899999999999996

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-32  Score=240.98  Aligned_cols=282  Identities=18%  Similarity=0.324  Sum_probs=218.2

Q ss_pred             eecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEE
Q psy14511         31 AITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRL  109 (488)
Q Consensus        31 ~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~v  109 (488)
                      ....|...|+|++  +||++||+|+ |++|+|||+++++   .+..+.+|.+.|++++|  ++++|++++.   |+.+++
T Consensus        10 ~~~~~~~~V~c~~--~d~~~l~sgs~Dg~i~vWd~~~~~---~~~~l~~H~~~V~~v~~--~~~~l~s~s~---D~~i~~   79 (293)
T d1p22a2          10 CRSETSKGVYCLQ--YDDQKIVSGLRDNTIKIWDKNTLE---CKRILTGHTGSVLCLQY--DERVIITGSS---DSTVRV   79 (293)
T ss_dssp             CCCSSCCCEEEEE--CCSSEEEEEESSSCEEEEESSSCC---EEEEECCCSSCEEEEEC--CSSEEEEEET---TSCEEE
T ss_pred             ccCCCCCCEEEEE--EcCCEEEEEeCCCeEEEEECCCCc---EEEEEecCCCCEeeeec--ccceeecccc---cccccc
Confidence            3457888999865  5799999998 9999999998744   55667899999999987  4667776665   999999


Q ss_pred             EecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCcee
Q psy14511        110 WNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERI  189 (488)
Q Consensus       110 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (488)
                      |++..+............                                                              
T Consensus        80 ~~~~~~~~~~~~~~~~~~--------------------------------------------------------------   97 (293)
T d1p22a2          80 WDVNTGEMLNTLIHHCEA--------------------------------------------------------------   97 (293)
T ss_dssp             EESSSCCEEEEECCCCSC--------------------------------------------------------------
T ss_pred             cccccccccccccccccc--------------------------------------------------------------
Confidence            999888765444332110                                                              


Q ss_pred             ecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEE
Q psy14511        190 LEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLW  269 (488)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~  269 (488)
                                 ........+.++++..++.+.+|+...............+...+.++.+.+  ..++++ +.|+.+++|
T Consensus        98 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~-s~d~~i~~~  163 (293)
T d1p22a2          98 -----------VLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD--KYIVSA-SGDRTIKVW  163 (293)
T ss_dssp             -----------EEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEET--TEEEEE-ETTSEEEEE
T ss_pred             -----------cccccccccceeecccccceeEeeccccccccccccccccccccccceecc--cccccc-cCCCceeee
Confidence                       001112245678888999999999987764443333222778888887765  466677 889999999


Q ss_pred             ECCcceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeE
Q psy14511        270 HEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTV  348 (488)
Q Consensus       270 d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i  348 (488)
                      |.++++.+..+.++...+..+.+++..+++++.||.|++||+++. ........+...+..  +++++.+|++++ ||.|
T Consensus       164 d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~v~~--~~~~~~~l~sg~~dg~i  240 (293)
T d1p22a2         164 NTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECG-ACLRVLEGHEELVRC--IRFDNKRIVSGAYDGKI  240 (293)
T ss_dssp             ETTTCCEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTC-CEEEEECCCSSCEEE--EECCSSEEEEEETTSCE
T ss_pred             cCCCCcEEEEEcccccccccccCCCCeEEEecCCCEEEEEecccc-eeeeeecccceeeee--ccccceEEEEEcCCCEE
Confidence            999999999999999999999999999999999999999999986 456667777777764  566788999888 6999


Q ss_pred             EEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCc
Q psy14511        349 KIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADET  428 (488)
Q Consensus       349 ~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~  428 (488)
                      ++||+........                              .....++..+.+|.+.|++++|  ++++|+|+|.||+
T Consensus       241 ~iwd~~~~~~~~~------------------------------~~~~~~~~~~~~H~~~V~~v~~--d~~~l~s~s~Dg~  288 (293)
T d1p22a2         241 KVWDLVAALDPRA------------------------------PAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDT  288 (293)
T ss_dssp             EEEEHHHHTSTTS------------------------------CTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSE
T ss_pred             EEEECCCCccccc------------------------------cCCceeeEEecCCCCCEEEEEE--cCCEEEEEecCCE
Confidence            9999865421110                              1223567788999999999998  5679999999999


Q ss_pred             EEEEe
Q psy14511        429 ISIWN  433 (488)
Q Consensus       429 v~iw~  433 (488)
                      |++||
T Consensus       289 i~iWD  293 (293)
T d1p22a2         289 ILIWD  293 (293)
T ss_dssp             EEEEC
T ss_pred             EEEeC
Confidence            99997

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.3e-32  Score=242.28  Aligned_cols=276  Identities=17%  Similarity=0.204  Sum_probs=200.3

Q ss_pred             CCceEEEeecCC-eEEEEEcccCcc-cceeeccc-CceEEEEEEcc--CCcEEEEec-CCeEEEEeccccCcCCCcc---
Q psy14511          4 NGNLLSCGTIGG-NILHYDVRTHSD-YPTAITRE-GDVVCGLKWSP--NGRYLASGS-NNTVKIWDFRQLDAKRPQV---   74 (488)
Q Consensus         4 dg~~la~g~~dg-~i~iwd~~~~~~-~~~~~~~h-~~~V~~l~~sp--~g~~las~~-d~~i~vwd~~~~~~~~~~~---   74 (488)
                      +|+.||.++.+. .|+.||...... ....+.+| ...|++++|+|  +|++||+|+ ||+|+|||+..++....+.   
T Consensus        28 ~~~~la~~~~~~~~i~~~~~~~~~~~~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~~~~~~~~~~~  107 (325)
T d1pgua1          28 TTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNV  107 (325)
T ss_dssp             TTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEE
T ss_pred             CCCEEEEEeCCCEEEEEEeCCCCCccceEEEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecCCcceeeeeccc
Confidence            788999876443 345566544321 22345666 56899999998  678999998 9999999998654333221   


Q ss_pred             --cccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeee
Q psy14511         75 --NNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFE  152 (488)
Q Consensus        75 --~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (488)
                        .+..|.++|.+++|+++++++++++.. .++.+++|++++++.+..+..+...+..+.+.+..               
T Consensus       108 ~~~~~~~~~~v~~v~~s~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~---------------  171 (325)
T d1pgua1         108 KSEFQVLAGPISDISWDFEGRRLCVVGEG-RDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSR---------------  171 (325)
T ss_dssp             EEEEECCSSCEEEEEECTTSSEEEEEECC-SSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSS---------------
T ss_pred             ccccccccCcEEEEEECCCCCccceeecc-ccceEEEEeecccccceeeeecccccccccccccc---------------
Confidence              234588899999999999988877642 37889999999998877776654433222222111               


Q ss_pred             ccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEE
Q psy14511        153 IDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQL  232 (488)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~  232 (488)
                                                                             +..+++++.|+.+++|+....+...
T Consensus       172 -------------------------------------------------------~~~~~~~~~d~~v~~~d~~~~~~~~  196 (325)
T d1pgua1         172 -------------------------------------------------------PMRSMTVGDDGSVVFYQGPPFKFSA  196 (325)
T ss_dssp             -------------------------------------------------------SCEEEEEETTTEEEEEETTTBEEEE
T ss_pred             -------------------------------------------------------cceEEEeecccccccccccccccce
Confidence                                                                   1235678899999999999887766


Q ss_pred             EEecCCCCCCceEEEEEcCCC-CeEEEEeCCCCcEEEEECCcceeeeeeccccccE----EEEEe-cCCEEEEeecCCeE
Q psy14511        233 LVEYPTYDNAYISCVAWKPRT-TDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQV----IAMCW-NGNLLSCGTIGGNI  306 (488)
Q Consensus       233 ~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v----~~~~~-~~~~l~~~~~dg~i  306 (488)
                      .......+...|.+++|+|++ .+++++ +.|+.|++||+++++.+..+.+|..++    .++.+ ++++|++++.|+.|
T Consensus       197 ~~~~~~~~~~~v~~v~~~pd~~~~l~s~-~~d~~i~iwd~~~~~~~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i  275 (325)
T d1pgua1         197 SDRTHHKQGSFVRDVEFSPDSGEFVITV-GSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATI  275 (325)
T ss_dssp             EECSSSCTTCCEEEEEECSTTCCEEEEE-ETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEE
T ss_pred             ecccccCCCCccEEeeeccccceecccc-ccccceeeeeeccccccccccccccccccceeeeeccCCCEEEEEeCCCeE
Confidence            655433378889999999974 666666 899999999999999999998877655    55565 78999999999999


Q ss_pred             EEEECcCCCccceeeecCCc--cEE--EEEEccCCcEEEEEe-cCeEEEEEC
Q psy14511        307 LHYDVRTHSDYPTAITREGD--VVC--GLKWSPNGRYLASGS-NNTVKIWDF  353 (488)
Q Consensus       307 ~i~d~~~~~~~~~~~~~~~~--~i~--~~~~s~~~~~l~~~~-d~~i~iwd~  353 (488)
                      ++||+++++ ++..+..|..  .+.  ++.+.+++ +|++++ ||.|++||+
T Consensus       276 ~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~l~s~s~dg~i~vwdl  325 (325)
T d1pgua1         276 RVWDVTTSK-CVQKWTLDKQQLGNQQVGVVATGNG-RIISLSLDGTLNFYEL  325 (325)
T ss_dssp             EEEETTTTE-EEEEEECCTTCGGGCEEEEEEEETT-EEEEEETTSCEEEEET
T ss_pred             EEEECCCCC-EEEEEEecCCcccCeEEEEEECCCC-EEEEEECCCEEEEEEC
Confidence            999999864 5555544433  233  34444444 667777 699999986

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.1e-32  Score=244.53  Aligned_cols=295  Identities=12%  Similarity=0.072  Sum_probs=206.1

Q ss_pred             cceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccce
Q psy14511         28 YPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQT  106 (488)
Q Consensus        28 ~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~  106 (488)
                      +.+++++|.+.|++|+|+|++++||+|+ |++|+|||+++......+....+|.++|.+++|+|++..++++++.  |+.
T Consensus         3 ~v~~~~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~--d~~   80 (342)
T d1yfqa_           3 IVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTV--QGE   80 (342)
T ss_dssp             EEECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEET--TSC
T ss_pred             eEEcCCCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEccc--ccc
Confidence            3456789999999999999999999998 9999999998755443444445799999999999987766666653  999


Q ss_pred             EEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCC
Q psy14511        107 VRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKP  186 (488)
Q Consensus       107 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (488)
                      |++|++..+.........                                                              
T Consensus        81 v~~w~~~~~~~~~~~~~~--------------------------------------------------------------   98 (342)
T d1yfqa_          81 ILKVDLIGSPSFQALTNN--------------------------------------------------------------   98 (342)
T ss_dssp             EEEECSSSSSSEEECBSC--------------------------------------------------------------
T ss_pred             eeeeeccccccccccccc--------------------------------------------------------------
Confidence            999998766532221111                                                              


Q ss_pred             ceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcE
Q psy14511        187 ERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYI  266 (488)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i  266 (488)
                                                                           +........+.++...++++ +.++.+
T Consensus        99 -----------------------------------------------------~~~~~~~~~~~~~~~~~~~~-~~~~~~  124 (342)
T d1yfqa_          99 -----------------------------------------------------EANLGICRICKYGDDKLIAA-SWDGLI  124 (342)
T ss_dssp             -----------------------------------------------------CCCSCEEEEEEETTTEEEEE-ETTSEE
T ss_pred             -----------------------------------------------------cccccccccccccccccccc-cccccc
Confidence                                                                 22233344555666777777 899999


Q ss_pred             EEEECCcceeeee----ecc----ccccEEEEEecCCEEEEeecCCeEEEEECcCCCccce--eeecCCccEEEEEEc-c
Q psy14511        267 DLWHEQEERLIQK----LRT----HMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPT--AITREGDVVCGLKWS-P  335 (488)
Q Consensus       267 ~i~d~~~~~~~~~----~~~----~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~--~~~~~~~~i~~~~~s-~  335 (488)
                      ++||++.+.....    ...    .......+..++..+++++.|+.|++||+........  ....+...+....+. +
T Consensus       125 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (342)
T d1yfqa_         125 EVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPK  204 (342)
T ss_dssp             EEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSG
T ss_pred             ceeeccccccceeeecccccccccceeeeeeeeccCCceeeecCCCcEEEEecccCcccceeeeecccccceeeeEeecC
Confidence            9999865432222    222    1223445555889999999999999999987653322  223333445555554 4


Q ss_pred             CCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEc
Q psy14511        336 NGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLS  414 (488)
Q Consensus       336 ~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s  414 (488)
                      ++..+++++ ||.+.+|+...........                     . ...+..  .+......+|...|++++|+
T Consensus       205 ~~~~~~~~s~dg~~~v~~~~~~~~~~~~~---------------------~-~~~~~~--~~~~~~~~~~~~~v~~l~~s  260 (342)
T d1yfqa_         205 EQEGYACSSIDGRVAVEFFDDQGDDYNSS---------------------K-RFAFRC--HRLNLKDTNLAYPVNSIEFS  260 (342)
T ss_dssp             GGCEEEEEETTSEEEEEECCTTCCSTTCT---------------------T-CEEEEC--CCCCTTCCSSCCCEEEEEEC
T ss_pred             CCCEEEeecCCCeEEEEEecCCcceeecc---------------------c-cceeee--eeeccCCCcccccceeEEec
Confidence            667888887 6999999987653211110                     0 000000  01112234577789999999


Q ss_pred             CCCCEEEEEeCCCcEEEEecCCCCccccccccCCcceEEeecCCCceEEE
Q psy14511        415 PDQTCVAAASADETISIWNCFPRDKKRKARQVGSGSSLEFAILKQPVSLT  464 (488)
Q Consensus       415 ~~~~~l~t~~~dg~v~iw~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~  464 (488)
                      |++++||||+.||.|++||+.+++.+...........++|+|++..++..
T Consensus       261 p~~~~lasg~~Dg~v~vWD~~~~~~l~~~~~~~~~~~~~~s~~~~~l~~a  310 (342)
T d1yfqa_         261 PRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLA  310 (342)
T ss_dssp             TTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEEECSSEEEEE
T ss_pred             CCccEEEEECCCCEEEEEECCCCcEEEEecCCCCCEEEEEEeCCCEEEEE
Confidence            99999999999999999999999888666556677789999999887653

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=100.00  E-value=1.6e-31  Score=245.21  Aligned_cols=355  Identities=10%  Similarity=-0.013  Sum_probs=257.0

Q ss_pred             EEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCC--Cccccccccccee
Q psy14511          8 LSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKR--PQVNNQCHLSAVK   84 (488)
Q Consensus         8 la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~--~~~~~~~h~~~v~   84 (488)
                      +++.+.+|+|.|||..+++.+. .+..|. .+..++|||||++|++++ |+.|++||+.+++...  .+....+|.+.+.
T Consensus        35 ~v~~~d~g~v~v~D~~t~~v~~-~~~~g~-~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~  112 (432)
T d1qksa2          35 SVTLRDAGQIALIDGSTYEIKT-VLDTGY-AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIET  112 (432)
T ss_dssp             EEEETTTTEEEEEETTTCCEEE-EEECSS-CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEE
T ss_pred             EEEEcCCCEEEEEECCCCcEEE-EEeCCC-CeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCeEE
Confidence            5788999999999999999664 455553 599999999999999998 9999999998765322  2333456777888


Q ss_pred             EEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccc
Q psy14511         85 AIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKR  164 (488)
Q Consensus        85 ~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (488)
                      +..|+|||++|++++..  ++++++||..+++.+..+..+........+.+.+.                          
T Consensus       113 s~~~SpDG~~l~vs~~~--~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~--------------------------  164 (432)
T d1qksa2         113 SKMEGWEDKYAIAGAYW--PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPR--------------------------  164 (432)
T ss_dssp             CCSTTCTTTEEEEEEEE--TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCC--------------------------
T ss_pred             ecccCCCCCEEEEEcCC--CCeEEEEeCccccceeeeccCCccccceeccCCCc--------------------------
Confidence            88899999998877764  99999999999998888776644333333222210                          


Q ss_pred             cccceeeecccccccccccCCCceeecCCCccccceeeeeeeC--CCcE-EEEECCCeEEEEECCCCceEEEEecCCCCC
Q psy14511        165 TVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG--YHDT-LAVALDTSVYTWNTKTNKTQLLVEYPTYDN  241 (488)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~  241 (488)
                                                          ...+.++  +..+ ++...++.|.+|+..+.+......++  ..
T Consensus       165 ------------------------------------~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~~~~~~~~~i~--~g  206 (432)
T d1qksa2         165 ------------------------------------VAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEIS--AE  206 (432)
T ss_dssp             ------------------------------------EEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEE--CC
T ss_pred             ------------------------------------eeEEEECCCCCEEEEEEccCCeEEEEEccCCCcceEEEEc--cc
Confidence                                                0011111  2233 33447899999999988766665554  55


Q ss_pred             CceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecc-----ccccEEEEEe-c-CCEEEEe-ecCCeEEEEECcC
Q psy14511        242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRT-----HMHQVIAMCW-N-GNLLSCG-TIGGNILHYDVRT  313 (488)
Q Consensus       242 ~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~-----~~~~v~~~~~-~-~~~l~~~-~~dg~i~i~d~~~  313 (488)
                      ..+..++|+|+|+++++++..+..+.++|..+++.+..+..     |......... . +....+. ..++.+.+|+...
T Consensus       207 ~~~~~~~~spdg~~~~va~~~~~~v~v~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~lg~~~v~~~~~~~  286 (432)
T d1qksa2         207 RFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDP  286 (432)
T ss_dssp             SSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred             CccccceECCCCCEEEEeccccceEEEeecccceEEEEeccCccccccCcccceecCCCCceecccccCCceEEeccccc
Confidence            67889999999999988867788999999998877766532     3333334444 2 2333333 2478899998765


Q ss_pred             CCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeC
Q psy14511        314 HSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEY  392 (488)
Q Consensus       314 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~  392 (488)
                      ..     ...|...+....++|++..+++++ ++..++|+.............  ...||++.+++  ++.|+.+++|++
T Consensus       287 ~~-----~~~~~~~v~~~~~~~~g~~~~~~s~p~~~~lw~~~~~~~~~~~~~s--v~vpDg~~la~--~s~d~~~k~w~~  357 (432)
T d1qksa2         287 EG-----HPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGS--VAVFDIKAMTG--DGSDPEFKTLPI  357 (432)
T ss_dssp             TT-----CTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTC--EEEEEGGGCCC--SSSCCCEEEECH
T ss_pred             cc-----ccccccEEEEEEEcCCCCeEEEEecCCccceeecccCCCCCCeeeE--EEEEechhhcc--cccCCceEeccc
Confidence            32     234556688999999999888888 599999987665332222211  23389999998  899999999998


Q ss_pred             CCcceeEEEeeccccEEEEEEcCCCCEEEEEe-----CCCcEEEEecCCCCcccc
Q psy14511        393 PRLHLIEELKIHQERILSAVLSPDQTCVAAAS-----ADETISIWNCFPRDKKRK  442 (488)
Q Consensus       393 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~-----~dg~v~iw~~~~~~~~~~  442 (488)
                      .++..+   ..|...|.+++|||||++++.+.     .+|.|.|||..+.+....
T Consensus       358 ~~~~~l---~~~~~~v~~~~fS~DG~~v~~S~~~~~~~~g~i~i~D~~T~k~~~~  409 (432)
T d1qksa2         358 AEWAGI---TEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKHV  409 (432)
T ss_dssp             HHHHTC---CSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEE
T ss_pred             cccccc---CCCCCcEEEeEECCCCCEEEEEEecCCCCCCcEEEEECCCceEEeE
Confidence            665433   35777899999999999886553     468899999999987543

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-31  Score=230.96  Aligned_cols=263  Identities=16%  Similarity=0.269  Sum_probs=201.6

Q ss_pred             CccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCccccccc
Q psy14511          1 MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCH   79 (488)
Q Consensus         1 ~~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h   79 (488)
                      |++||++||+|+.||+|+|||+.+++.+ ..+.+|.+.|++++|  ++++|++|+ |+.|++|++..+.....   ...+
T Consensus        21 ~~~d~~~l~sgs~Dg~i~vWd~~~~~~~-~~l~~H~~~V~~v~~--~~~~l~s~s~D~~i~~~~~~~~~~~~~---~~~~   94 (293)
T d1p22a2          21 LQYDDQKIVSGLRDNTIKIWDKNTLECK-RILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNT---LIHH   94 (293)
T ss_dssp             EECCSSEEEEEESSSCEEEEESSSCCEE-EEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEE---ECCC
T ss_pred             EEEcCCEEEEEeCCCeEEEEECCCCcEE-EEEecCCCCEeeeec--ccceeeccccccccccccccccccccc---cccc
Confidence            3569999999999999999999998854 678999999999887  678999998 99999999987543221   2222


Q ss_pred             ccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeecccccee
Q psy14511         80 LSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVL  159 (488)
Q Consensus        80 ~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (488)
                      .  .....+.+....+++...   ++.+.+|+...............                                 
T Consensus        95 ~--~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~---------------------------------  136 (293)
T d1p22a2          95 C--EAVLHLRFNNGMMVTCSK---DRSIAVWDMASPTDITLRRVLVG---------------------------------  136 (293)
T ss_dssp             C--SCEEEEECCTTEEEEEET---TSCEEEEECSSSSCCEEEEEECC---------------------------------
T ss_pred             c--cccccccccccceeeccc---ccceeEeeccccccccccccccc---------------------------------
Confidence            2  223344555556777776   99999999876653322211100                                 


Q ss_pred             ccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCC
Q psy14511        160 NQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTY  239 (488)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~  239 (488)
                                                           ....+....+....+++++.|+.+++||..+++....+..   
T Consensus       137 -------------------------------------~~~~v~~~~~~~~~~~~~s~d~~i~~~d~~~~~~~~~~~~---  176 (293)
T d1p22a2         137 -------------------------------------HRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNG---  176 (293)
T ss_dssp             -------------------------------------CSSCEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEEC---
T ss_pred             -------------------------------------cccccccceecccccccccCCCceeeecCCCCcEEEEEcc---
Confidence                                                 0011122334456778888999999999999987766654   


Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCC----
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHS----  315 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~----  315 (488)
                      +...+..+.++  +..++++ +.|+.|++||+++.+.+....++...+..+.+++.+|++++.||.|++||+....    
T Consensus       177 ~~~~v~~~~~~--~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~  253 (293)
T d1p22a2         177 HKRGIACLQYR--DRLVVSG-SSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRA  253 (293)
T ss_dssp             CSSCEEEEEEE--TTEEEEE-ETTSCEEEEETTTCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEEHHHHTSTTS
T ss_pred             cccccccccCC--CCeEEEe-cCCCEEEEEecccceeeeeecccceeeeeccccceEEEEEcCCCEEEEEECCCCccccc
Confidence            66778777775  4578888 8999999999999999999999999999988899999999999999999975422    


Q ss_pred             ----ccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEE
Q psy14511        316 ----DYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWD  352 (488)
Q Consensus       316 ----~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd  352 (488)
                          .....+.+|.+.|++++|+  +++|++++ |++|++||
T Consensus       254 ~~~~~~~~~~~~H~~~V~~v~~d--~~~l~s~s~Dg~i~iWD  293 (293)
T d1p22a2         254 PAGTLCLRTLVEHSGRVFRLQFD--EFQIVSSSHDDTILIWD  293 (293)
T ss_dssp             CTTTTEEEEECCCSSCCCCEEEC--SSCEEECCSSSEEEEEC
T ss_pred             cCCceeeEEecCCCCCEEEEEEc--CCEEEEEecCCEEEEeC
Confidence                2456678899999999984  56899988 69999997

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=2.3e-30  Score=238.27  Aligned_cols=342  Identities=13%  Similarity=0.086  Sum_probs=238.5

Q ss_pred             eEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCC--Ccccccccccce
Q psy14511          7 LLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKR--PQVNNQCHLSAV   83 (488)
Q Consensus         7 ~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~--~~~~~~~h~~~v   83 (488)
                      ++++.+.||+|+|||+.+++.+ ..+..|. .+..++|||||++|++++ |+.|++||+.+++...  .+....+|.+.+
T Consensus        34 ~~V~~~~dg~v~vwD~~t~~~~-~~l~~g~-~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~  111 (426)
T d1hzua2          34 FSVTLRDAGQIALVDGDSKKIV-KVIDTGY-AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVE  111 (426)
T ss_dssp             EEEEETTTTEEEEEETTTCSEE-EEEECCS-SEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEE
T ss_pred             EEEEEcCCCEEEEEECCCCcEE-EEEeCCC-CeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcceE
Confidence            4567888999999999999865 4566664 589999999999999998 9999999999865332  223345677888


Q ss_pred             eEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecccc
Q psy14511         84 KAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSK  163 (488)
Q Consensus        84 ~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (488)
                      .+++|+|||+++++++..  ++.+++||..++........+...+....+.+.+..  ..+                   
T Consensus       112 ~s~~~spDG~~l~v~~~~--~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i-------------------  168 (426)
T d1hzua2         112 SSKFKGYEDRYTIAGAYW--PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRV--AAI-------------------  168 (426)
T ss_dssp             ECCSTTCTTTEEEEEEEE--SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCE--EEE-------------------
T ss_pred             EeeeecCCCCEEEEeecC--CCeEEEEcCCccceeEEeeccCCCccceeecCCCce--eEE-------------------
Confidence            899999999998887763  999999999999888777666443333332222100  000                   


Q ss_pred             ccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEE-ECCCeEEEEECCCCceEEEEecCCCCCC
Q psy14511        164 RTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAV-ALDTSVYTWNTKTNKTQLLVEYPTYDNA  242 (488)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~v~iw~~~~~~~~~~~~~~~~~~~  242 (488)
                                                             ........++.. ...+.+.+++.............  +..
T Consensus       169 ---------------------------------------~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~  207 (426)
T d1hzua2         169 ---------------------------------------IASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG--AAP  207 (426)
T ss_dssp             ---------------------------------------EECSSSSEEEEEETTTTEEEEEECSSSSSCEEEEEE--CCS
T ss_pred             ---------------------------------------EECCCCCEEEEecCCCCeEEEEEeccccceeeEEec--cCC
Confidence                                                   000011222222 24566666766655533333222  667


Q ss_pred             ceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecccc----ccEEEEEecC-C--EEEEeecCCeEEEEECcCCC
Q psy14511        243 YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHM----HQVIAMCWNG-N--LLSCGTIGGNILHYDVRTHS  315 (488)
Q Consensus       243 ~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~----~~v~~~~~~~-~--~l~~~~~dg~i~i~d~~~~~  315 (488)
                      .+..++|+|++++++++...+..+.+++..+++.+.......    .........+ .  ..+....++.+.+|+.....
T Consensus       208 ~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~~~~~~~  287 (426)
T d1hzua2         208 FLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKN  287 (426)
T ss_dssp             SEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEEETTTEEEEEEECTTTCEEEEEECCTTT
T ss_pred             ccEeeeECCCCcEEEeeeecccceeeeecccccEEEEeccCCcccccceeeeecCCCCceEEeccCCCceEEEeeccccc
Confidence            889999999999999987788899999999988877664321    1222222222 1  22334567888888876532


Q ss_pred             ------ccceeeecCCccEEEEEEccCCcEEEE-------Ee-cCeEEEEECCCCCCCcccc--------------eeee
Q psy14511        316 ------DYPTAITREGDVVCGLKWSPNGRYLAS-------GS-NNTVKIWDFRQLDAKRPLG--------------LIVP  367 (488)
Q Consensus       316 ------~~~~~~~~~~~~i~~~~~s~~~~~l~~-------~~-d~~i~iwd~~~~~~~~~~~--------------~~~~  367 (488)
                            +....+.+|...+..++|+|++++|++       +. +++|++||+++++....+.              ....
T Consensus       288 ~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~~~~~~~~~~~~~~~~rv~~~  367 (426)
T d1hzua2         288 HPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQP  367 (426)
T ss_dssp             CTTTBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCCEEEE
T ss_pred             cccccceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEECCCCCcCeEEeccchhcccCCCCccEEEE
Confidence                  345668889999999999999999995       33 4899999999886544321              1122


Q ss_pred             eecCCCCEEEEEc---cCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEE
Q psy14511        368 KLKREGRELVTSH---GKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCV  420 (488)
Q Consensus       368 ~~~~~~~~l~~~~---g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l  420 (488)
                      +|||||+++++++   ++.++.|+|||.+++++...+.++.      .++|+|++-
T Consensus       368 ~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T~k~~~~i~~~~------~~tp~Gk~~  417 (426)
T d1hzua2         368 EYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDPR------LITPTGKFN  417 (426)
T ss_dssp             EECSSSSEEEEEECCCTTSCCEEEEEETTTTEEEEEECCTT------CCSEEEEEE
T ss_pred             EECCCCCEEEEEEecCCCCCCeEEEEECCCCeEEEEECCCC------ccCCCceEe
Confidence            7999999886542   4578999999999999998888775      345777664

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.98  E-value=2.1e-31  Score=240.16  Aligned_cols=325  Identities=11%  Similarity=0.017  Sum_probs=211.4

Q ss_pred             Ccc-CCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-C--CeEEEEeccccCcCCCcccc
Q psy14511          1 MCW-NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-N--NTVKIWDFRQLDAKRPQVNN   76 (488)
Q Consensus         1 ~~~-dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d--~~i~vwd~~~~~~~~~~~~~   76 (488)
                      |++ ||+++|+++ +|.|.+||+..+... +  .+|...|.+++|+|||++|++++ +  ..|++||+++++.    ..+
T Consensus        10 fSP~dG~~~a~~~-~g~v~v~d~~~~~~~-~--~~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~----~~~   81 (360)
T d1k32a3          10 FSPLDGDLIAFVS-RGQAFIQDVSGTYVL-K--VPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKA----EKF   81 (360)
T ss_dssp             EEECGGGCEEEEE-TTEEEEECTTSSBEE-E--CSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCE----EEC
T ss_pred             ccCCCCCEEEEEE-CCeEEEEECCCCcEE-E--ccCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcE----EEe
Confidence            356 999999986 689999999887633 2  37999999999999999998876 3  4899999987543    235


Q ss_pred             cccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeecccc
Q psy14511         77 QCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRK  156 (488)
Q Consensus        77 ~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (488)
                      ..|...|.+++|+||+++|++.+.   ++.+++|++.+++....+..+........+++++..    +.+...       
T Consensus        82 ~~~~~~v~~~~~spdg~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~----la~~~~-------  147 (360)
T d1k32a3          82 EENLGNVFAMGVDRNGKFAVVAND---RFEIMTVDLETGKPTVIERSREAMITDFTISDNSRF----IAYGFP-------  147 (360)
T ss_dssp             CCCCCSEEEEEECTTSSEEEEEET---TSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCE----EEEEEE-------
T ss_pred             eCCCceEEeeeecccccccceecc---ccccccccccccceeeeeecccccccchhhccceee----eeeecc-------
Confidence            679999999999999999888887   999999999999887777766555555555443310    000000       


Q ss_pred             ceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEec
Q psy14511        157 KVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEY  236 (488)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~  236 (488)
                                                                        .....+.+..++.+++|+..+++...... 
T Consensus       148 --------------------------------------------------~~~~~~~~~~~~~~~v~d~~~~~~~~~~~-  176 (360)
T d1k32a3         148 --------------------------------------------------LKHGETDGYVMQAIHVYDMEGRKIFAATT-  176 (360)
T ss_dssp             --------------------------------------------------ECSSTTCSCCEEEEEEEETTTTEEEECSC-
T ss_pred             --------------------------------------------------ccccceeeccccceeeeccccCceeeecc-
Confidence                                                              00111122345678999999887654433 


Q ss_pred             CCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe------------cCCEEEEeecCC
Q psy14511        237 PTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW------------NGNLLSCGTIGG  304 (488)
Q Consensus       237 ~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~------------~~~~l~~~~~dg  304 (488)
                         +...+..++|+|+|+.|+++ +.++.+.+|+........   .....+..+.+            ++..++++..+.
T Consensus       177 ---~~~~~~~~~~spdg~~l~~~-s~~~~~~~~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~  249 (360)
T d1k32a3         177 ---ENSHDYAPAFDADSKNLYYL-SYRSLDPSPDRVVLNFSF---EVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDL  249 (360)
T ss_dssp             ---SSSBEEEEEECTTSCEEEEE-ESCCCCCEECSSSSCEEC---CSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCC
T ss_pred             ---cccccccccccCCCCEEEEE-eCCCceEcccccccceee---ccccceEEEecccCccccceECCCcCcccccceee
Confidence               66778899999999999999 899999999976543221   11122222222            222222221110


Q ss_pred             eEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCC
Q psy14511        305 NILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQD  384 (488)
Q Consensus       305 ~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~  384 (488)
                             .........+.........+...+++...+...                       .+++++.+++.  +..+
T Consensus       250 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~--~~~~  297 (360)
T d1k32a3         250 -------NDMYKRSSPINVDPGDYRMIIPLESSILIYSVP-----------------------VHGEFAAYYQG--APEK  297 (360)
T ss_dssp             -------TTGGGGCEECSCCCBCEEEEEECSSEEEEEECC-----------------------CCCSHHHHHHC--CCCC
T ss_pred             -------cccccceeecccCcCceeEeeecCCCceEEEEE-----------------------ecCCCeeEEEe--cCCC
Confidence                   000000111111122223333333322221111                       11122223333  6778


Q ss_pred             CeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccc
Q psy14511        385 CSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKR  441 (488)
Q Consensus       385 ~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~  441 (488)
                      +.+++||+.+++..    .|.+.|.+++|||||++|++++.||.|++||++.++...
T Consensus       298 ~~i~~~d~~~~~~~----~~~~~v~~~~~SpDG~~l~~~~~Dg~i~v~d~~~~~~~~  350 (360)
T d1k32a3         298 GVLLKYDVKTRKVT----EVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDER  350 (360)
T ss_dssp             EEEEEEETTTCCEE----EEEEEEEEEEECTTSCEEEEEETTSCEEEEESSCTTSCE
T ss_pred             CEEEEEECCCCeEE----EecCCcCEEEECCCCCEEEEEECCCeEEEEECCCCCcce
Confidence            88999998876542    345569999999999999999999999999999887654

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=8.6e-31  Score=238.72  Aligned_cols=193  Identities=12%  Similarity=0.178  Sum_probs=134.2

Q ss_pred             ceEEEEEcCC-----CCeEEEEeCCCCcEEEEECCcce------------------eeeeeccccccEEEEEe-cCCEEE
Q psy14511        243 YISCVAWKPR-----TTDLAVTNTCTEYIDLWHEQEER------------------LIQKLRTHMHQVIAMCW-NGNLLS  298 (488)
Q Consensus       243 ~i~~~~~~~~-----~~~l~~~~~~~~~i~i~d~~~~~------------------~~~~~~~~~~~v~~~~~-~~~~l~  298 (488)
                      .+..+++.++     +.+++++ +.||.+++|++....                  .......+...+.+++| ...+|+
T Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~-~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~la  199 (393)
T d1sq9a_         121 SFWALKWGASNDRLLSHRLVAT-DVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIA  199 (393)
T ss_dssp             CEEEEEEECCC----CEEEEEE-ETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEE
T ss_pred             ceEEEEEecCCCcccccEEEEE-cCCCcEEEEEeecCCcccceeeeeeccceecccceecccCCCCcEEEEEECCCCEEE
Confidence            3445555543     3456666 788899998864210                  11112234556788888 345899


Q ss_pred             EeecCCeEEEEECcCCCc-----cceeeecCCccEEEEEEccCCcEEEEEe-cC---eEEEEECCCCCCCcccceeeeee
Q psy14511        299 CGTIGGNILHYDVRTHSD-----YPTAITREGDVVCGLKWSPNGRYLASGS-NN---TVKIWDFRQLDAKRPLGLIVPKL  369 (488)
Q Consensus       299 ~~~~dg~i~i~d~~~~~~-----~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~---~i~iwd~~~~~~~~~~~~~~~~~  369 (488)
                      +|+.||.|++||+.+++.     ....+.+|..+|++++|+|+|++|++++ |+   .|++||+++++....+..     
T Consensus       200 sgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~-----  274 (393)
T d1sq9a_         200 TGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSV-----  274 (393)
T ss_dssp             EECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECB-----
T ss_pred             EEeCCCcEEEEeecccccccccccccccccccceEEEcccccccceeeeecCCCCcceeeecccccceeeeeecc-----
Confidence            999999999999987642     2234567899999999999999999998 44   589999886532111100     


Q ss_pred             cCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcc-ccccccCC
Q psy14511        370 KREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKK-RKARQVGS  448 (488)
Q Consensus       370 ~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~-~~~~~~~~  448 (488)
                                           ..........+.+|.+.|++++|+||+++|++++.|++|++||+.+++++ .+.+|...
T Consensus       275 ---------------------~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g~~~~~l~gH~~~  333 (393)
T d1sq9a_         275 ---------------------PTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDD  333 (393)
T ss_dssp             ---------------------C--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGG
T ss_pred             ---------------------ccccccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEECCCCCEEEEECCcCCc
Confidence                                 00112334456789999999999999999999999999999999999887 44667766


Q ss_pred             cc----eEEeecCCCceE
Q psy14511        449 GS----SLEFAILKQPVS  462 (488)
Q Consensus       449 v~----~~~~s~~~~~~~  462 (488)
                      |.    .++|+|++..+.
T Consensus       334 v~~~~~~~~~~~~~~~~~  351 (393)
T d1sq9a_         334 IEIEEDILAVDEHGDSLA  351 (393)
T ss_dssp             CSSGGGCCCBCTTSCBCS
T ss_pred             ccCCccEEEECCCCCEEE
Confidence            65    578999887653

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=1.2e-29  Score=220.82  Aligned_cols=247  Identities=18%  Similarity=0.248  Sum_probs=192.8

Q ss_pred             EEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEE
Q psy14511          8 LSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAI   86 (488)
Q Consensus         8 la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l   86 (488)
                      |++|+.||+|++||+.++      ..+|...|.+++|++++. +++++ |++|++|++...+          +...+..+
T Consensus        24 l~sgs~Dg~v~~Wd~~~~------~~~h~~~V~~~~~~~~~~-~~s~s~D~~v~~w~~~~~~----------~~~~~~~~   86 (287)
T d1pgua2          24 LISGSYDGRIMEWSSSSM------HQDHSNLIVSLDNSKAQE-YSSISWDDTLKVNGITKHE----------FGSQPKVA   86 (287)
T ss_dssp             TEEEETTSCEEETTTTEE------ECCCCSCEEEEECCSTTC-CEEEETTTEEEETTEEEEE----------CSSCEEEE
T ss_pred             EEEEeCCCeEEEEECCCC------CCCCCCCEEEEEecCCCe-EEEEeeccccccccccccc----------cccceeee
Confidence            899999999999998764      357999999999998765 56666 9999999987522          23457788


Q ss_pred             EEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccc
Q psy14511         87 AWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTV  166 (488)
Q Consensus        87 ~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (488)
                      .+.+++.. ++.+.   ++.+.+|+..+++....+.....                                        
T Consensus        87 ~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~----------------------------------------  122 (287)
T d1pgua2          87 SANNDGFT-AVLTN---DDDLLILQSFTGDIIKSVRLNSP----------------------------------------  122 (287)
T ss_dssp             EECSSSEE-EEEET---TSEEEEEETTTCCEEEEEECSSC----------------------------------------
T ss_pred             eeccCCce-EEEee---cccceeeeccceeeeeeccccce----------------------------------------
Confidence            89988854 44555   77889999888877655543311                                        


Q ss_pred             cceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECC-CeEEEEECCCCceEEEEecCCCCCCceE
Q psy14511        167 SPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALD-TSVYTWNTKTNKTQLLVEYPTYDNAYIS  245 (488)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~v~iw~~~~~~~~~~~~~~~~~~~~i~  245 (488)
                                                        ...+...++.+++++.+ +.+++|++...+........  +...++
T Consensus       123 ----------------------------------~~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~~~~~~~~--~~~~v~  166 (287)
T d1pgua2         123 ----------------------------------GSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTP--LRAKPS  166 (287)
T ss_dssp             ----------------------------------EEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSC--CSSCEE
T ss_pred             ----------------------------------eeeeeccCcceeeeccccceeeeeeccccceeeeeeec--cCCcee
Confidence                                              11123334566777755 57999998766544443322  778899


Q ss_pred             EEEEcCCCCeEEEEeCCCCcEEEEECCcceeee-eeccccccEEEEEe------------cCCEEEEeecCCeEEEEECc
Q psy14511        246 CVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQ-KLRTHMHQVIAMCW------------NGNLLSCGTIGGNILHYDVR  312 (488)
Q Consensus       246 ~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~-~~~~~~~~v~~~~~------------~~~~l~~~~~dg~i~i~d~~  312 (488)
                      +++|+|++.+|+++ +.+|.|++||+.+++... .+..|...|.+++|            ++.++++|+.|+.|++||++
T Consensus       167 ~~~~s~~~~~l~~g-~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~  245 (287)
T d1pgua2         167 YISISPSETYIAAG-DVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVK  245 (287)
T ss_dssp             EEEECTTSSEEEEE-ETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESS
T ss_pred             EEEeccCccccccc-cccccccceeecccccccccccccccccceeeecccccccccccCCCCeeEeecCCCeEEEEECC
Confidence            99999999999999 999999999999887654 46789999999987            24689999999999999998


Q ss_pred             CCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEEC
Q psy14511        313 THSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDF  353 (488)
Q Consensus       313 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~  353 (488)
                      ++......+.+|...|++++|+|+++ |++++ |+.|++|++
T Consensus       246 ~~~~~~~~~~~h~~~V~~v~~~~~~~-l~s~g~D~~v~iW~i  286 (287)
T d1pgua2         246 RPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNV  286 (287)
T ss_dssp             CTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEE
T ss_pred             CCCeEEEEeCCCCCCeEEEEECCCCE-EEEEECCCeEEEEEE
Confidence            87677778889999999999999986 55555 799999985

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=5.5e-29  Score=226.71  Aligned_cols=281  Identities=14%  Similarity=0.159  Sum_probs=185.0

Q ss_pred             cCCceEEEeecCCeEEEEEcccCccc---c--eeecccCceEEEEE------Ecc-CCcEEEEec-CCeEEEEeccccCc
Q psy14511          3 WNGNLLSCGTIGGNILHYDVRTHSDY---P--TAITREGDVVCGLK------WSP-NGRYLASGS-NNTVKIWDFRQLDA   69 (488)
Q Consensus         3 ~dg~~la~g~~dg~i~iwd~~~~~~~---~--~~~~~h~~~V~~l~------~sp-~g~~las~~-d~~i~vwd~~~~~~   69 (488)
                      .++++|++++.|++|+|||..+....   .  .....|...+..+.      .++ ++.++++++ |+.|++|++.....
T Consensus        22 ~~~~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~dg~v~~w~~~~~~~  101 (393)
T d1sq9a_          22 ACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDE  101 (393)
T ss_dssp             ECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTT
T ss_pred             EeCCEEEEEECCCeEEEEECCCCCCCcccceeEeeeeccCCceEeeeEeeeccCCCCCcEEEEEeCCCcEEEEEccCCCc
Confidence            46789999999999999998765421   1  11223443333322      222 345777887 99999999875433


Q ss_pred             CCCcc-------cccccccceeEEEEecCC-----CeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccc
Q psy14511         70 KRPQV-------NNQCHLSAVKAIAWCPWE-----PTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYRE  137 (488)
Q Consensus        70 ~~~~~-------~~~~h~~~v~~l~~~~~~-----~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~  137 (488)
                      .....       ....+...+..++|.+++     .++++++.   |+++++|++..............           
T Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---dg~i~vw~~~~~~~~~~~~~~~~-----------  167 (393)
T d1sq9a_         102 TKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDV---KGTTYIWKFHPFADESNSLTLNW-----------  167 (393)
T ss_dssp             TCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEET---TSCEEEEEEESSSSHHHHTTTCC-----------
T ss_pred             eeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcC---CCcEEEEEeecCCcccceeeeee-----------
Confidence            22211       122355678888887764     45666665   99999999864321100000000           


Q ss_pred             cccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECC
Q psy14511        138 QKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALD  217 (488)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  217 (488)
                                                                                                     .
T Consensus       168 -------------------------------------------------------------------------------~  168 (393)
T d1sq9a_         168 -------------------------------------------------------------------------------S  168 (393)
T ss_dssp             -------------------------------------------------------------------------------C
T ss_pred             -------------------------------------------------------------------------------c
Confidence                                                                                           0


Q ss_pred             CeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeee------ccccccEEEEE
Q psy14511        218 TSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKL------RTHMHQVIAMC  291 (488)
Q Consensus       218 ~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~------~~~~~~v~~~~  291 (488)
                      ...        ...........+...+.+++|+|++ +++++ +.|+.|++||+.+++++..+      .+|..+|.+++
T Consensus       169 ~~~--------~~~~~~~~~~~~~~~~~~v~~s~dg-~lasg-s~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~  238 (393)
T d1sq9a_         169 PTL--------ELQGTVESPMTPSQFATSVDISERG-LIATG-FNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVK  238 (393)
T ss_dssp             CEE--------EEEEEECCSSSSCCCCCEEEECTTS-EEEEE-CTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEE
T ss_pred             cce--------ecccceecccCCCCcEEEEEECCCC-EEEEE-eCCCcEEEEeecccccccccccccccccccceEEEcc
Confidence            000        0001111111156678899999997 77877 99999999999988776544      46889999999


Q ss_pred             e--cCCEEEEeecCC---eEEEEECcCCCcc------------ceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECC
Q psy14511        292 W--NGNLLSCGTIGG---NILHYDVRTHSDY------------PTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFR  354 (488)
Q Consensus       292 ~--~~~~l~~~~~dg---~i~i~d~~~~~~~------------~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~  354 (488)
                      |  ++++|++|+.|+   .|++||++++...            ...+.+|...|++++|+|++++|++++          
T Consensus       239 ~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s----------  308 (393)
T d1sq9a_         239 FSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAG----------  308 (393)
T ss_dssp             ECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEE----------
T ss_pred             cccccceeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEEC----------
Confidence            9  789999999987   4899999875421            122347999999999999999999886          


Q ss_pred             CCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEE----EEEEcCCCCEEEEEe
Q psy14511        355 QLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERIL----SAVLSPDQTCVAAAS  424 (488)
Q Consensus       355 ~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~----~~~~s~~~~~l~t~~  424 (488)
                                                  .|++|++||+++++++.++++|.+.|.    .++|+|++..+++++
T Consensus       309 ----------------------------~D~~v~vWd~~~g~~~~~l~gH~~~v~~~~~~~~~~~~~~~~~~~~  354 (393)
T d1sq9a_         309 ----------------------------WDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPG  354 (393)
T ss_dssp             ----------------------------TTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCC
T ss_pred             ----------------------------CCCEEEEEECCCCCEEEEECCcCCcccCCccEEEECCCCCEEEEcc
Confidence                                        344455555555677778888877665    467888877776554

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.96  E-value=9.9e-29  Score=222.51  Aligned_cols=308  Identities=12%  Similarity=0.017  Sum_probs=227.8

Q ss_pred             EEEEcc-CCcEEEEecCCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeee
Q psy14511         41 GLKWSP-NGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKC  119 (488)
Q Consensus        41 ~l~~sp-~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~  119 (488)
                      .-.||| ||+++|+++++.|++||++++...+     .+|...|.+++|+|||+.|++++.. .+..|++||+.+++...
T Consensus         7 ~~~fSP~dG~~~a~~~~g~v~v~d~~~~~~~~-----~~~~~~v~~~~~spDg~~l~~~~~~-~g~~v~v~d~~~~~~~~   80 (360)
T d1k32a3           7 AEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLK-----VPEPLRIRYVRRGGDTKVAFIHGTR-EGDFLGIYDYRTGKAEK   80 (360)
T ss_dssp             EEEEEECGGGCEEEEETTEEEEECTTSSBEEE-----CSCCSCEEEEEECSSSEEEEEEEET-TEEEEEEEETTTCCEEE
T ss_pred             cccccCCCCCEEEEEECCeEEEEECCCCcEEE-----ccCCCCEEEEEECCCCCEEEEEEcC-CCCEEEEEECCCCcEEE
Confidence            357999 9999999999999999998644322     2589999999999999998887762 12478999987665211


Q ss_pred             eeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccc
Q psy14511        120 HVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDF  199 (488)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (488)
                                                                                                      
T Consensus        81 --------------------------------------------------------------------------------   80 (360)
T d1k32a3          81 --------------------------------------------------------------------------------   80 (360)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeee
Q psy14511        200 YTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQK  279 (488)
Q Consensus       200 ~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~  279 (488)
                                                          +.. +...+.+++|+|++++|+++ +.++.+++|++.+++....
T Consensus        81 ------------------------------------~~~-~~~~v~~~~~spdg~~l~~~-~~~~~~~~~~~~~~~~~~~  122 (360)
T d1k32a3          81 ------------------------------------FEE-NLGNVFAMGVDRNGKFAVVA-NDRFEIMTVDLETGKPTVI  122 (360)
T ss_dssp             ------------------------------------CCC-CCCSEEEEEECTTSSEEEEE-ETTSEEEEEETTTCCEEEE
T ss_pred             ------------------------------------eeC-CCceEEeeeeccccccccee-ccccccccccccccceeee
Confidence                                                111 77789999999999999999 9999999999999999888


Q ss_pred             eccccccEEEEEe--cCCEEEEee----------cCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cC
Q psy14511        280 LRTHMHQVIAMCW--NGNLLSCGT----------IGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NN  346 (488)
Q Consensus       280 ~~~~~~~v~~~~~--~~~~l~~~~----------~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~  346 (488)
                      +..|...+.+++|  +|++|+.+.          .++.+++||+.+++  ...+..+...+..++|+|+|++|++++ ++
T Consensus       123 ~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~--~~~~~~~~~~~~~~~~spdg~~l~~~s~~~  200 (360)
T d1k32a3         123 ERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK--IFAATTENSHDYAPAFDADSKNLYYLSYRS  200 (360)
T ss_dssp             EECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE--EEECSCSSSBEEEEEECTTSCEEEEEESCC
T ss_pred             eecccccccchhhccceeeeeeeccccccceeeccccceeeeccccCc--eeeecccccccccccccCCCCEEEEEeCCC
Confidence            8888888888888  788888643          34569999998753  344556667788999999999999998 59


Q ss_pred             eEEEEECCCCCCCcccc--ee----------eeeecCCCCEEEEEccCCC-----CeEEEEeCCCcceeEEEeeccccEE
Q psy14511        347 TVKIWDFRQLDAKRPLG--LI----------VPKLKREGRELVTSHGKQD-----CSLKMWEYPRLHLIEELKIHQERIL  409 (488)
Q Consensus       347 ~i~iwd~~~~~~~~~~~--~~----------~~~~~~~~~~l~~~~g~~~-----~~i~i~d~~~~~~~~~~~~~~~~v~  409 (488)
                      .+.+||...........  ..          ...+++++..++.  +..+     ..+..++...++. ..+..+.+.+.
T Consensus       201 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  277 (360)
T d1k32a3         201 LDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEA--GEYDLNDMYKRSSPINVDPGDY-RMIIPLESSIL  277 (360)
T ss_dssp             CCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCC--CCCCCTTGGGGCEECSCCCBCE-EEEEECSSEEE
T ss_pred             ceEcccccccceeeccccceEEEecccCccccceECCCcCcccc--cceeecccccceeecccCcCce-eEeeecCCCce
Confidence            99999976543221110  00          1167777776654  2222     2244444454443 34555666666


Q ss_pred             EEEEcCCC---CEEEEEeCCCcEEEEecCCCCccccccccCCcceEEeecCCCceEEEEeeecccccceeeEEEEeeccc
Q psy14511        410 SAVLSPDQ---TCVAAASADETISIWNCFPRDKKRKARQVGSGSSLEFAILKQPVSLTALLRSRAVEKQQHAIAYTVFGE  486 (488)
Q Consensus       410 ~~~~s~~~---~~l~t~~~dg~v~iw~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~  486 (488)
                      .+.+.+.+   .++++++.++.|++||+.+++..   .+.+.+.+++|||||+.+..       +..+..+.++..+.|+
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~---~~~~~v~~~~~SpDG~~l~~-------~~~Dg~i~v~d~~~~~  347 (360)
T d1k32a3         278 IYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVT---EVKNNLTDLRLSADRKTVMV-------RKDDGKIYTFPLEKPE  347 (360)
T ss_dssp             EEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEE---EEEEEEEEEEECTTSCEEEE-------EETTSCEEEEESSCTT
T ss_pred             EEEEEecCCCeeEEEecCCCCEEEEEECCCCeEE---EecCCcCEEEECCCCCEEEE-------EECCCeEEEEECCCCC
Confidence            66666554   47888999999999999987654   34556899999999999833       5567778888877776


Q ss_pred             c
Q psy14511        487 A  487 (488)
Q Consensus       487 ~  487 (488)
                      .
T Consensus       348 ~  348 (360)
T d1k32a3         348 D  348 (360)
T ss_dssp             S
T ss_pred             c
Confidence            4

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=1.8e-28  Score=218.72  Aligned_cols=280  Identities=11%  Similarity=0.066  Sum_probs=187.0

Q ss_pred             ccCCceEEEeecCCeEEEEEcccCcccce--eecccCceEEEEEEccC-CcEEEEec-CCeEEEEeccccCcCCCccccc
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTHSDYPT--AITREGDVVCGLKWSPN-GRYLASGS-NNTVKIWDFRQLDAKRPQVNNQ   77 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~--~~~~h~~~V~~l~~sp~-g~~las~~-d~~i~vwd~~~~~~~~~~~~~~   77 (488)
                      +.||++||+|+.||+|+|||+.++.....  ...+|.++|.+++|+|+ +.+|++|+ |+.|++|++.........  ..
T Consensus        20 sp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~w~~~~~~~~~~~--~~   97 (342)
T d1yfqa_          20 IPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQAL--TN   97 (342)
T ss_dssp             EGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEEC--BS
T ss_pred             eCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccceeeeecccccccccc--cc
Confidence            45899999999999999999987654322  23479999999999996 55888888 999999999864432221  22


Q ss_pred             ccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccc
Q psy14511         78 CHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKK  157 (488)
Q Consensus        78 ~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (488)
                      .+........+.++...+++.+.   |+++++||++.+.........                                 
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~wd~~~~~~~~~~~~~---------------------------------  141 (342)
T d1yfqa_          98 NEANLGICRICKYGDDKLIAASW---DGLIEVIDPRNYGDGVIAVKN---------------------------------  141 (342)
T ss_dssp             CCCCSCEEEEEEETTTEEEEEET---TSEEEEECHHHHTTBCEEEEE---------------------------------
T ss_pred             ccccccccccccccccccccccc---ccccceeeccccccceeeecc---------------------------------
Confidence            23334445556666666666666   999999998654322111100                                 


Q ss_pred             eeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecC
Q psy14511        158 VLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYP  237 (488)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~  237 (488)
                                                                                                  ....
T Consensus       142 ----------------------------------------------------------------------------~~~~  145 (342)
T d1yfqa_         142 ----------------------------------------------------------------------------LNSN  145 (342)
T ss_dssp             ----------------------------------------------------------------------------SCSS
T ss_pred             ----------------------------------------------------------------------------cccc
Confidence                                                                                        0000


Q ss_pred             CCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeee---eccccccEEEEEe---cCCEEEEeecCCeEEEEEC
Q psy14511        238 TYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQK---LRTHMHQVIAMCW---NGNLLSCGTIGGNILHYDV  311 (488)
Q Consensus       238 ~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~---~~~~~~~v~~~~~---~~~~l~~~~~dg~i~i~d~  311 (488)
                      . .........+.+.+..++++ +.|+.|++||+...+....   ...+.....+..+   ++..+++++.||.+.+|+.
T Consensus       146 ~-~~~~~~~~~~~~~~~~~~~~-~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~  223 (342)
T d1yfqa_         146 N-TKVKNKIFTMDTNSSRLIVG-MNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFF  223 (342)
T ss_dssp             S-SSSCCCEEEEEECSSEEEEE-ESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEEC
T ss_pred             c-ccceeeeeeeeccCCceeee-cCCCcEEEEecccCcccceeeeecccccceeeeEeecCCCCEEEeecCCCeEEEEEe
Confidence            0 22233445566777788888 8999999999876543322   2233444555444   5789999999999999998


Q ss_pred             cCCCccc--------------eeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccceeeeeecCCCCEEE
Q psy14511        312 RTHSDYP--------------TAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELV  377 (488)
Q Consensus       312 ~~~~~~~--------------~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~  377 (488)
                      .......              .....|...+++++|+|++++||+|+                                 
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~lasg~---------------------------------  270 (342)
T d1yfqa_         224 DDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAG---------------------------------  270 (342)
T ss_dssp             CTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEE---------------------------------
T ss_pred             cCCcceeeccccceeeeeeeccCCCcccccceeEEecCCccEEEEEC---------------------------------
Confidence            6543211              11234556688888888888888775                                 


Q ss_pred             EEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCC
Q psy14511        378 TSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFP  436 (488)
Q Consensus       378 ~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~  436 (488)
                           .||.|++||+++++.+.++..+ ..+..++|+|++++|++++.|+.+++|....
T Consensus       271 -----~Dg~v~vWD~~~~~~l~~~~~~-~~~~~~~~s~~~~~l~~a~sdd~~~~~~~~~  323 (342)
T d1yfqa_         271 -----SDGIISCWNLQTRKKIKNFAKF-NEDSVVKIACSDNILCLATSDDTFKTNAAID  323 (342)
T ss_dssp             -----TTSCEEEEETTTTEEEEECCCC-SSSEEEEEEECSSEEEEEEECTHHHHCSSSC
T ss_pred             -----CCCEEEEEECCCCcEEEEecCC-CCCEEEEEEeCCCEEEEEEcCCcEEEeeeeC
Confidence                 3444444444555566666433 2345678889999999999999888887543

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.96  E-value=4.1e-28  Score=223.08  Aligned_cols=324  Identities=10%  Similarity=0.016  Sum_probs=223.8

Q ss_pred             EEccCCc--EEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeee
Q psy14511         43 KWSPNGR--YLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKC  119 (488)
Q Consensus        43 ~~sp~g~--~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~  119 (488)
                      .+++|.+  ++++.+ |++|+|||+.+++   .+.++..| ..+..++|+|||+++++++.   |+++++||+.+++...
T Consensus        25 ~~~~d~~~~~~V~~~~dg~v~vwD~~t~~---~~~~l~~g-~~~~~vafSPDGk~l~~~~~---d~~v~vwd~~t~~~~~   97 (426)
T d1hzua2          25 LNDLDLPNLFSVTLRDAGQIALVDGDSKK---IVKVIDTG-YAVHISRMSASGRYLLVIGR---DARIDMIDLWAKEPTK   97 (426)
T ss_dssp             CSCCCGGGEEEEEETTTTEEEEEETTTCS---EEEEEECC-SSEEEEEECTTSCEEEEEET---TSEEEEEETTSSSCEE
T ss_pred             cccCCCCeEEEEEEcCCCEEEEEECCCCc---EEEEEeCC-CCeeEEEECCCCCEEEEEeC---CCCEEEEEccCCceeE
Confidence            4555544  456666 8999999999854   34445555 45899999999999887776   9999999998876432


Q ss_pred             eeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccc
Q psy14511        120 HVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDF  199 (488)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (488)
                      .....                                                                           
T Consensus        98 ~~~i~---------------------------------------------------------------------------  102 (426)
T d1hzua2          98 VAEIK---------------------------------------------------------------------------  102 (426)
T ss_dssp             EEEEE---------------------------------------------------------------------------
T ss_pred             EEEEe---------------------------------------------------------------------------
Confidence            21110                                                                           


Q ss_pred             eeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeee
Q psy14511        200 YTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQK  279 (488)
Q Consensus       200 ~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~  279 (488)
                                                         ...+ +...+.+++|+|||+++++++..++.+++||..++.....
T Consensus       103 -----------------------------------~~~~-~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~  146 (426)
T d1hzua2         103 -----------------------------------IGIE-ARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQI  146 (426)
T ss_dssp             -----------------------------------CCSE-EEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEE
T ss_pred             -----------------------------------CCCC-CcceEEeeeecCCCCEEEEeecCCCeEEEEcCCccceeEE
Confidence                                               0001 3445667788999999888867899999999999888777


Q ss_pred             eccccccE-----------EEEEe--cCCEEEEe-ecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-
Q psy14511        280 LRTHMHQV-----------IAMCW--NGNLLSCG-TIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-  344 (488)
Q Consensus       280 ~~~~~~~v-----------~~~~~--~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-  344 (488)
                      +..|...+           ..+..  ++..++.. ...+.+.+++.............+...+..++|+|++++++++. 
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~  226 (426)
T d1hzua2         147 VSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAAN  226 (426)
T ss_dssp             EECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECSSSSSCEEEEEECCSSEEEEEECTTSCEEEEEET
T ss_pred             eeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCCeEEEEEeccccceeeEEeccCCccEeeeECCCCcEEEeeee
Confidence            66544332           23333  34443333 33456666666655444445556777899999999999998887 


Q ss_pred             c-CeEEEEECCCCCCCccccee-------eeee-cCCCCEEEEEccCCCCeEEEEeCCC-------cceeEEEeeccccE
Q psy14511        345 N-NTVKIWDFRQLDAKRPLGLI-------VPKL-KREGRELVTSHGKQDCSLKMWEYPR-------LHLIEELKIHQERI  408 (488)
Q Consensus       345 d-~~i~iwd~~~~~~~~~~~~~-------~~~~-~~~~~~l~~~~g~~~~~i~i~d~~~-------~~~~~~~~~~~~~v  408 (488)
                      + ..+.+++..+.+........       ...+ .+............++.+.+|+...       ++...++.+|...+
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v  306 (426)
T d1hzua2         227 NSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGS  306 (426)
T ss_dssp             TCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEEETTTEEEEEEECTTTCEEEEEECCTTTCTTTBTSEEEEEECSSSCC
T ss_pred             cccceeeeecccccEEEEeccCCcccccceeeeecCCCCceEEeccCCCceEEEeeccccccccccceEeEEEecCCCce
Confidence            4 88999999887543322211       1122 2333333333366788898888754       47788999999999


Q ss_pred             EEEEEcCCCCEEEE-------EeCCCcEEEEecCCCCcccc----------ccccCCcceEEeecCCCceEEEEeeeccc
Q psy14511        409 LSAVLSPDQTCVAA-------ASADETISIWNCFPRDKKRK----------ARQVGSGSSLEFAILKQPVSLTALLRSRA  471 (488)
Q Consensus       409 ~~~~~s~~~~~l~t-------~~~dg~v~iw~~~~~~~~~~----------~~~~~~v~~~~~s~~~~~~~~~~~~~~~~  471 (488)
                      ..++|+||+++|++       ++.|++|++||+.+++....          ..+...+.+++|||||+.+.+...  ..+
T Consensus       307 ~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~~~~~~~~~~~~~~~~rv~~~~fSpDGk~i~vs~~--~~~  384 (426)
T d1hzua2         307 LFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVW--NGK  384 (426)
T ss_dssp             CCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCCEEEEEECSSSSEEEEEEC--CCT
T ss_pred             eEEEcCCCCceEEEeecCCCCcccCCEEEEEECCCCCcCeEEeccchhcccCCCCccEEEEEECCCCCEEEEEEe--cCC
Confidence            99999999999994       55688999999998876522          244566889999999998754332  234


Q ss_pred             ccceeeEEEEeeccc
Q psy14511        472 VEKQQHAIAYTVFGE  486 (488)
Q Consensus       472 ~~~~~~~i~~~~~g~  486 (488)
                      .++..+.|+...+++
T Consensus       385 ~~~~~i~v~D~~T~k  399 (426)
T d1hzua2         385 NDSSALVVVDDKTLK  399 (426)
T ss_dssp             TSCCEEEEEETTTTE
T ss_pred             CCCCeEEEEECCCCe
Confidence            456666777666654

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.95  E-value=2.4e-24  Score=188.34  Aligned_cols=271  Identities=15%  Similarity=0.135  Sum_probs=198.9

Q ss_pred             EEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEE-ec-CCeEEEEeccccCcCCCcccccccccceeE
Q psy14511          8 LSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLAS-GS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKA   85 (488)
Q Consensus         8 la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las-~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~   85 (488)
                      .++++.|++|.|||+++++.+ ..+... ..+..++|+|||++|+. ++ ++.|++||+.+++.   +..+..|. .+..
T Consensus         5 yV~~~~~~~v~v~D~~t~~~~-~~i~~g-~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~---~~~~~~~~-~~~~   78 (301)
T d1l0qa2           5 YIANSESDNISVIDVTSNKVT-ATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNV---IATVPAGS-SPQG   78 (301)
T ss_dssp             EEEETTTTEEEEEETTTTEEE-EEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEE---EEEEECSS-SEEE
T ss_pred             EEEECCCCEEEEEECCCCeEE-EEEECC-CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCce---eeeeeccc-cccc
Confidence            345678999999999999855 344333 34789999999998854 44 89999999988553   33344443 4688


Q ss_pred             EEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecccccc
Q psy14511         86 IAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRT  165 (488)
Q Consensus        86 l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (488)
                      +.|++++.++++++..  ++.+.+|+..+++....+.                                           
T Consensus        79 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-------------------------------------------  113 (301)
T d1l0qa2          79 VAVSPDGKQVYVTNMA--SSTLSVIDTTSNTVAGTVK-------------------------------------------  113 (301)
T ss_dssp             EEECTTSSEEEEEETT--TTEEEEEETTTTEEEEEEE-------------------------------------------
T ss_pred             cccccccccccccccc--cceeeecccccceeeeecc-------------------------------------------
Confidence            9999999988888774  8889999987766432221                                           


Q ss_pred             ccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceE
Q psy14511        166 VSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYIS  245 (488)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~  245 (488)
                                                                                                +.....
T Consensus       114 --------------------------------------------------------------------------~~~~~~  119 (301)
T d1l0qa2         114 --------------------------------------------------------------------------TGKSPL  119 (301)
T ss_dssp             --------------------------------------------------------------------------CSSSEE
T ss_pred             --------------------------------------------------------------------------ccccce
Confidence                                                                                      334567


Q ss_pred             EEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecC-CeEEEEECcCCCccceeee
Q psy14511        246 CVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIG-GNILHYDVRTHSDYPTAIT  322 (488)
Q Consensus       246 ~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d-g~i~i~d~~~~~~~~~~~~  322 (488)
                      +++++|+++.+++++..++.+.+|+..+.+....+..+ .....+.+  +++.++++..+ +.+.+|+.... .......
T Consensus       120 ~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  197 (301)
T d1l0qa2         120 GLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTN-SVIDTVK  197 (301)
T ss_dssp             EEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTT-EEEEEEE
T ss_pred             EEEeecCCCeeeeeeccccceeeeeccccceeeecccC-CCceEEEeeccccceeeecccccccccccccce-eeeeccc
Confidence            89999999998877688999999999998888877654 34556666  66777666655 66777777653 3333333


Q ss_pred             cCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEe
Q psy14511        323 REGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELK  402 (488)
Q Consensus       323 ~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~  402 (488)
                      . ...+..++|+++++.++.+..                                   +..++.|++||+.+++.+..+.
T Consensus       198 ~-~~~~~~~~~~~~g~~~~v~~~-----------------------------------~~~~~~v~v~D~~t~~~~~~~~  241 (301)
T d1l0qa2         198 V-EAAPSGIAVNPEGTKAYVTNV-----------------------------------DKYFNTVSMIDTGTNKITARIP  241 (301)
T ss_dssp             C-SSEEEEEEECTTSSEEEEEEE-----------------------------------CSSCCEEEEEETTTTEEEEEEE
T ss_pred             c-cCCcceeeccccccccccccc-----------------------------------cceeeeeeeeecCCCeEEEEEc
Confidence            3 345678899999987765531                                   2345667777777777777776


Q ss_pred             eccccEEEEEEcCCCCEE-EEEeCCCcEEEEecCCCCcccc
Q psy14511        403 IHQERILSAVLSPDQTCV-AAASADETISIWNCFPRDKKRK  442 (488)
Q Consensus       403 ~~~~~v~~~~~s~~~~~l-~t~~~dg~v~iw~~~~~~~~~~  442 (488)
                      .+ ..+.+++|+|||++| ++++.|+.|++||+++++....
T Consensus       242 ~~-~~~~~va~spdg~~l~va~~~~~~i~v~D~~t~~~~~~  281 (301)
T d1l0qa2         242 VG-PDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITAT  281 (301)
T ss_dssp             CC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred             CC-CCEEEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEE
Confidence            44 457999999999987 5777899999999999987644

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.95  E-value=1e-25  Score=200.59  Aligned_cols=285  Identities=12%  Similarity=0.046  Sum_probs=191.8

Q ss_pred             ceEEEeecCCeEEEEEcccCcccceee-cccCceEEEEEEccCCcEEE-Eec-CCeEEEEeccccCcCCCccc--ccccc
Q psy14511          6 NLLSCGTIGGNILHYDVRTHSDYPTAI-TREGDVVCGLKWSPNGRYLA-SGS-NNTVKIWDFRQLDAKRPQVN--NQCHL   80 (488)
Q Consensus         6 ~~la~g~~dg~i~iwd~~~~~~~~~~~-~~h~~~V~~l~~sp~g~~la-s~~-d~~i~vwd~~~~~~~~~~~~--~~~h~   80 (488)
                      +||++++.|++|.|||+++++.+...- ..+...+.+++|+|||++|+ +++ ++.|.+||+.+++....+..  ...+.
T Consensus         2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~   81 (337)
T d1pbyb_           2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV   81 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred             eEEEEEcCCCEEEEEECCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCcccc
Confidence            589999999999999999988554322 23455688999999999875 455 89999999998664433221  11233


Q ss_pred             cceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceec
Q psy14511         81 SAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLN  160 (488)
Q Consensus        81 ~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (488)
                      ..+..++|+|++++++++..   +.....|..                                                
T Consensus        82 ~~~~~v~~s~dg~~l~~~~~---~~~~~~~~~------------------------------------------------  110 (337)
T d1pbyb_          82 KSLFGAALSPDGKTLAIYES---PVRLELTHF------------------------------------------------  110 (337)
T ss_dssp             ECTTCEEECTTSSEEEEEEE---EEEECSSCE------------------------------------------------
T ss_pred             cceeeEEEcCCCcEEEEeec---CCcceeeec------------------------------------------------
Confidence            45678999999998887765   443333321                                                


Q ss_pred             cccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCC
Q psy14511        161 QSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYD  240 (488)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~  240 (488)
                                                                           ...+..+.+||..+++....+.    .
T Consensus       111 -----------------------------------------------------~~~~~~~~~~d~~~~~~~~~~~----~  133 (337)
T d1pbyb_         111 -----------------------------------------------------EVQPTRVALYDAETLSRRKAFE----A  133 (337)
T ss_dssp             -----------------------------------------------------EECCCEEEEEETTTTEEEEEEE----C
T ss_pred             -----------------------------------------------------cccccceeeccccCCeEEEecc----c
Confidence                                                                 1235677788888888776666    3


Q ss_pred             CCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccE-EEEEe------------------------cCC
Q psy14511        241 NAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQV-IAMCW------------------------NGN  295 (488)
Q Consensus       241 ~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v-~~~~~------------------------~~~  295 (488)
                      ...+..++|+|+|++++++ +  +.+.+||..+++....+..+.... .....                        +..
T Consensus       134 ~~~~~~~~~s~dg~~l~~~-~--~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (337)
T d1pbyb_         134 PRQITMLAWARDGSKLYGL-G--RDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDID  210 (337)
T ss_dssp             CSSCCCEEECTTSSCEEEE-S--SSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSC
T ss_pred             cCCceEEEEcCCCCEEEEE-c--CCcceeeeecCcEEEEeecCCccccceecCCcceeeccccccceeeeeeeeeeeccc
Confidence            4467789999999999988 4  447789998887776654322110 00000                        111


Q ss_pred             EEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccceeeeeecCCCCE
Q psy14511        296 LLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRE  375 (488)
Q Consensus       296 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  375 (488)
                      ....+..++.+.+|+..++......+..+...+..++++|++.+++.+                                
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------  258 (337)
T d1pbyb_         211 PADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--------------------------------  258 (337)
T ss_dssp             TTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--------------------------------
T ss_pred             eeeecccCccEEEEEcCCCcEEEEEecCCCcceEEEEecccceEEEEc--------------------------------
Confidence            222223344566666665543333344445555555566655555433                                


Q ss_pred             EEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcccc
Q psy14511        376 LVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRK  442 (488)
Q Consensus       376 l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~  442 (488)
                              ++.+++||+.+++.+..+. +...+.+++|+|||++|++++.|+.|++||..+.+....
T Consensus       259 --------~~~i~v~d~~~~~~~~~~~-~~~~~~~~~~s~dG~~l~v~~~~~~i~v~D~~t~~~v~~  316 (337)
T d1pbyb_         259 --------YNVLESFDLEKNASIKRVP-LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQ  316 (337)
T ss_dssp             --------ESEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEE
T ss_pred             --------cccEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcEEEE
Confidence                    3456666667777777665 556789999999999999999999999999999887743

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.94  E-value=3.5e-25  Score=202.66  Aligned_cols=350  Identities=9%  Similarity=-0.024  Sum_probs=231.6

Q ss_pred             ccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeee--ee
Q psy14511         45 SPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKC--HV  121 (488)
Q Consensus        45 sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~--~~  121 (488)
                      +++.-++++.+ |+.|.|||..+++...   .+..| ..+..++|+|||+++++++.   |+++++||+.+++...  .+
T Consensus        29 ~~~~~~~v~~~d~g~v~v~D~~t~~v~~---~~~~g-~~~~~v~fSpDG~~l~~~s~---dg~v~~~d~~t~~~~~~~~i  101 (432)
T d1qksa2          29 DLENLFSVTLRDAGQIALIDGSTYEIKT---VLDTG-YAVHISRLSASGRYLFVIGR---DGKVNMIDLWMKEPTTVAEI  101 (432)
T ss_dssp             CGGGEEEEEETTTTEEEEEETTTCCEEE---EEECS-SCEEEEEECTTSCEEEEEET---TSEEEEEETTSSSCCEEEEE
T ss_pred             CCCcEEEEEEcCCCEEEEEECCCCcEEE---EEeCC-CCeeEEEECCCCCEEEEEcC---CCCEEEEEeeCCCceEEEEE
Confidence            33333456677 8999999999865443   44445 36899999999999988776   9999999998876432  22


Q ss_pred             ecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCcccccee
Q psy14511        122 KTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYT  201 (488)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (488)
                      .....+. .                                                                     ..
T Consensus       102 ~~~~~~~-~---------------------------------------------------------------------~~  111 (432)
T d1qksa2         102 KIGSEAR-S---------------------------------------------------------------------IE  111 (432)
T ss_dssp             ECCSEEE-E---------------------------------------------------------------------EE
T ss_pred             ecCCCCC-C---------------------------------------------------------------------eE
Confidence            2110000 0                                                                     00


Q ss_pred             eeeee--CCCcEE-EEECCCeEEEEECCCCceEEEEecCC--------CCCCceEEEEEcCCCCeEEEEeCCCCcEEEEE
Q psy14511        202 SGLDW--GYHDTL-AVALDTSVYTWNTKTNKTQLLVEYPT--------YDNAYISCVAWKPRTTDLAVTNTCTEYIDLWH  270 (488)
Q Consensus       202 ~~~~~--~~~~~~-~~~~d~~v~iw~~~~~~~~~~~~~~~--------~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d  270 (488)
                      ....+  ++..++ ++..++.|++||..+++.........        .+......+.++|++..++++...++.|.+||
T Consensus       112 ~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~d  191 (432)
T d1qksa2         112 TSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVD  191 (432)
T ss_dssp             ECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEE
T ss_pred             EecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCeEEEEE
Confidence            00111  223443 45589999999999999877665321        13455678899999998877768899999999


Q ss_pred             CCcceeeeeec-cccccEEEEEe--cCCEEEEeec-CCeEEEEECcCCCccceeee-----cCCccEEEEEEccCCcEEE
Q psy14511        271 EQEERLIQKLR-THMHQVIAMCW--NGNLLSCGTI-GGNILHYDVRTHSDYPTAIT-----REGDVVCGLKWSPNGRYLA  341 (488)
Q Consensus       271 ~~~~~~~~~~~-~~~~~v~~~~~--~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~-----~~~~~i~~~~~s~~~~~l~  341 (488)
                      ..+.+...... .+......+.+  +|+++++++. ++.+.++|..+.. ....+.     .|........+...+...+
T Consensus       192 ~~~~~~~~~~~i~~g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~  270 (432)
T d1qksa2         192 YTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGK-LVAIEDTGGQTPHPGRGANFVHPTFGPVWA  270 (432)
T ss_dssp             TTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTE-EEEEEECSSSSBCCTTCEEEEETTTEEEEE
T ss_pred             ccCCCcceEEEEcccCccccceECCCCCEEEEeccccceEEEeecccce-EEEEeccCccccccCcccceecCCCCceec
Confidence            98766544332 24456677777  7887766655 5678889988753 222221     2334444556666666666


Q ss_pred             EEe--cCeEEEEECCCCCCCcccc-eeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCC
Q psy14511        342 SGS--NNTVKIWDFRQLDAKRPLG-LIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQT  418 (488)
Q Consensus       342 ~~~--d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~  418 (488)
                      +..  ++.+.+|+........... .....++|++..+++  +..+...++|+..+..      .|.....++++ ||++
T Consensus       271 ~~~lg~~~v~~~~~~~~~~~~~~~~v~~~~~~~~g~~~~~--~s~p~~~~lw~~~~~~------~~~~~~~sv~v-pDg~  341 (432)
T d1qksa2         271 TSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFI--KTHPNSQYLYVDATLN------PEAEISGSVAV-FDIK  341 (432)
T ss_dssp             EEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCE--ECCTTCSEEEEECTTC------SSHHHHTCEEE-EEGG
T ss_pred             ccccCCceEEecccccccccccccEEEEEEEcCCCCeEEE--EecCCccceeecccCC------CCCCeeeEEEE-Eech
Confidence            665  4889999987654332222 223388899988888  6778899999865543      24443445555 9999


Q ss_pred             EEEEEeCCCcEEEEecCCCCccccccccCCcceEEeecCCCceEEEEeeecccccceeeEEEEeecc
Q psy14511        419 CVAAASADETISIWNCFPRDKKRKARQVGSGSSLEFAILKQPVSLTALLRSRAVEKQQHAIAYTVFG  485 (488)
Q Consensus       419 ~l~t~~~dg~v~iw~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g  485 (488)
                      .|++++.|+.+++|++.++..+  ..+...+.+++|||||+.+.++..  .....+..+.|+...++
T Consensus       342 ~la~~s~d~~~k~w~~~~~~~l--~~~~~~v~~~~fS~DG~~v~~S~~--~~~~~~g~i~i~D~~T~  404 (432)
T d1qksa2         342 AMTGDGSDPEFKTLPIAEWAGI--TEGQPRVVQGEFNKDGTEVWFSVW--NGKDQESALVVVDDKTL  404 (432)
T ss_dssp             GCCCSSSCCCEEEECHHHHHTC--CSSCCEEEEEEECTTSSEEEEEEE--CCTTSCCEEEEEETTTT
T ss_pred             hhcccccCCceEeccccccccc--CCCCCcEEEeEECCCCCEEEEEEe--cCCCCCCcEEEEECCCc
Confidence            9999999999999998665433  356677889999999999865533  22223334444444443

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.94  E-value=1e-25  Score=201.30  Aligned_cols=310  Identities=10%  Similarity=0.023  Sum_probs=206.3

Q ss_pred             ccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEe-c-CCeEEEEeccccCcCCCccc---c
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASG-S-NNTVKIWDFRQLDAKRPQVN---N   76 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~-~-d~~i~vwd~~~~~~~~~~~~---~   76 (488)
                      +-+|++|++++.+++|.|||+.+++.+......|...+.+++|+|||++|+++ . ++.|.+||+.+++.......   .
T Consensus         5 ~~~~~~l~~~~~~~~v~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~~~~~   84 (346)
T d1jmxb_           5 KAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVP   84 (346)
T ss_dssp             CTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCST
T ss_pred             CCCCcEEEEEcCCCEEEEEECCCCCEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeecccccc
Confidence            45899999999999999999999985543333566678899999999987554 4 89999999988654332211   1


Q ss_pred             cccccceeEEEEecCCCeEEeeeCC---------cccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEE
Q psy14511         77 QCHLSAVKAIAWCPWEPTLLATGGG---------ICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFL  147 (488)
Q Consensus        77 ~~h~~~v~~l~~~~~~~~l~~~~~~---------~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (488)
                      ..+...+..++|+|||++++++...         ..+..+.+|+..+++....+.....+.                   
T Consensus        85 ~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-------------------  145 (346)
T d1jmxb_          85 GEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPR-------------------  145 (346)
T ss_dssp             TEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCS-------------------
T ss_pred             cccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeeeccC-------------------
Confidence            2233457789999999988776531         015566777766655433222110000                   


Q ss_pred             EeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCC-CcEEEEECCCeEEEEECC
Q psy14511        148 LHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGY-HDTLAVALDTSVYTWNTK  226 (488)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~v~iw~~~  226 (488)
                                                                          ......+++ +.+++.  ++.+.+|+..
T Consensus       146 ----------------------------------------------------~~~~~~~~~~~~~~~~--~~~~~~~~~~  171 (346)
T d1jmxb_         146 ----------------------------------------------------QVYLMRAADDGSLYVA--GPDIYKMDVK  171 (346)
T ss_dssp             ----------------------------------------------------SCCCEEECTTSCEEEE--SSSEEEECTT
T ss_pred             ----------------------------------------------------ceEEEEecCCCEEEEe--CCcceEEEcc
Confidence                                                                000011122 334433  3568899999


Q ss_pred             CCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEecCCEEEEeecCCeE
Q psy14511        227 TNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNI  306 (488)
Q Consensus       227 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i  306 (488)
                      +++....+..    ......+.++|++..++.....++.+.+++....               .......++++..+..+
T Consensus       172 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~  232 (346)
T d1jmxb_         172 TGKYTVALPL----RNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIAR---------------FKDDKQDPATADLLYGY  232 (346)
T ss_dssp             TCCEEEEECS----TTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEE---------------C-------CCCEEEEEE
T ss_pred             CCCEEEEEec----CCCccceEEeccccEEEEEecCCCceEeeeeeee---------------eccCceeEeeccCCceE
Confidence            9887776653    2345566788888877766455555555542210               00123345556667789


Q ss_pred             EEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCe
Q psy14511        307 LHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCS  386 (488)
Q Consensus       307 ~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~  386 (488)
                      .+||+.++.........+...+..+.+++++.+++...++.+.+||.                                 
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~d~---------------------------------  279 (346)
T d1jmxb_         233 LSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKYDL---------------------------------  279 (346)
T ss_dssp             EEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEEESEEEEEET---------------------------------
T ss_pred             EEEECCCCceEEEEeecccceeEEEEEeCCCCEEEEecCCeEEEEEC---------------------------------
Confidence            99999987666666777888888899999888887765555555554                                 


Q ss_pred             EEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccccc
Q psy14511        387 LKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKA  443 (488)
Q Consensus       387 i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~~  443 (488)
                            .+++.+..+. +...+.+++|||||++|++++.|+.|++||+.+++.+...
T Consensus       280 ------~~~~~~~~~~-~~~~~~~va~s~DG~~l~v~~~d~~v~v~D~~t~~~i~~i  329 (346)
T d1jmxb_         280 ------KQRKLIKAAN-LDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNI  329 (346)
T ss_dssp             ------TTTEEEEEEE-CSSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEE
T ss_pred             ------CCCcEEEEEc-CCCCEEEEEEcCCCCEEEEEeCCCcEEEEECccCCEEEEE
Confidence                  4455555554 4456899999999999999999999999999999887543

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.91  E-value=1.5e-21  Score=170.27  Aligned_cols=262  Identities=11%  Similarity=0.110  Sum_probs=199.6

Q ss_pred             EEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEE
Q psy14511        211 TLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAM  290 (488)
Q Consensus       211 ~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~  290 (488)
                      +++.+.++.|.+||+.+++....+..    ...+..++|+|+|+++++++..++.|++||+.+++.+..+..+.. ...+
T Consensus         5 yV~~~~~~~v~v~D~~t~~~~~~i~~----g~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~~-~~~~   79 (301)
T d1l0qa2           5 YIANSESDNISVIDVTSNKVTATIPV----GSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSS-PQGV   79 (301)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEEEC----SSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSS-EEEE
T ss_pred             EEEECCCCEEEEEECCCCeEEEEEEC----CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeecccc-cccc
Confidence            34556899999999999998887764    345789999999999877658899999999999999998877654 4677


Q ss_pred             Ee--cCC-EEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe--cCeEEEEECCCCCCCccccee
Q psy14511        291 CW--NGN-LLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAKRPLGLI  365 (488)
Q Consensus       291 ~~--~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--d~~i~iwd~~~~~~~~~~~~~  365 (488)
                      .+  ++. .++++..++.+.+|+..++. ....+..+ .....++|+|+++.++...  ++.+.+|+..+......+...
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (301)
T d1l0qa2          80 AVSPDGKQVYVTNMASSTLSVIDTTSNT-VAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG  157 (301)
T ss_dssp             EECTTSSEEEEEETTTTEEEEEETTTTE-EEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC
T ss_pred             ccccccccccccccccceeeecccccce-eeeecccc-ccceEEEeecCCCeeeeeeccccceeeeeccccceeeecccC
Confidence            77  555 45556677899999998753 44444444 4577899999999887666  388999999887544433322


Q ss_pred             ----eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeC---CCcEEEEecCCCC
Q psy14511        366 ----VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASA---DETISIWNCFPRD  438 (488)
Q Consensus       366 ----~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~---dg~v~iw~~~~~~  438 (488)
                          ...++|+++.++++ ...++.+.+|+....+....+..+ ..+..++|+++++.++.++.   ++.|++||+.+++
T Consensus       158 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~~  235 (301)
T d1l0qa2         158 RSPKGIAVTPDGTKVYVA-NFDSMSISVIDTVTNSVIDTVKVE-AAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNK  235 (301)
T ss_dssp             SSEEEEEECTTSSEEEEE-ETTTTEEEEEETTTTEEEEEEECS-SEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTE
T ss_pred             CCceEEEeeccccceeee-cccccccccccccceeeeeccccc-CCcceeeccccccccccccccceeeeeeeeecCCCe
Confidence                22889999998886 456788889998887777666544 55788999999998876643   4689999999998


Q ss_pred             ccccccccCCcceEEeecCCCceEEEEeeecccccceeeEEEEeecccc
Q psy14511        439 KKRKARQVGSGSSLEFAILKQPVSLTALLRSRAVEKQQHAIAYTVFGEA  487 (488)
Q Consensus       439 ~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~  487 (488)
                      ..........+..++|+|||+.+...      ...+..+.++..++|+.
T Consensus       236 ~~~~~~~~~~~~~va~spdg~~l~va------~~~~~~i~v~D~~t~~~  278 (301)
T d1l0qa2         236 ITARIPVGPDPAGIAVTPDGKKVYVA------LSFCNTVSVIDTATNTI  278 (301)
T ss_dssp             EEEEEECCSSEEEEEECTTSSEEEEE------ETTTTEEEEEETTTTEE
T ss_pred             EEEEEcCCCCEEEEEEeCCCCEEEEE------ECCCCeEEEEECCCCeE
Confidence            87766667788999999999976322      23445666677666653

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.91  E-value=7.2e-21  Score=171.46  Aligned_cols=328  Identities=9%  Similarity=-0.057  Sum_probs=214.1

Q ss_pred             cccCceEEEEEEccCCcEEEEec------CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCC-----
Q psy14511         33 TREGDVVCGLKWSPNGRYLASGS------NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGG-----  101 (488)
Q Consensus        33 ~~h~~~V~~l~~sp~g~~las~~------d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~-----  101 (488)
                      ..+..++..++++|||+.++...      ++.|.+||..+++..   ..+..+..  ..++|+|||++++++...     
T Consensus        17 ~~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~---~~~~~~~~--~~~a~SpDG~~l~va~~~~~~~~   91 (373)
T d2madh_          17 GAADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSIL---GHVNGGFL--PNPVAAHSGSEFALASTSFSRIA   91 (373)
T ss_pred             ccCCCCccccccCCCCCEEEEEcccccCCCceEEEEECCCCCEE---EEEeCCCC--ccEEEcCCCCEEEEEeecCCccc
Confidence            46778899999999999887652      467999998886533   33444433  379999999998887531     


Q ss_pred             --cccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeeccccccc
Q psy14511        102 --ICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLP  179 (488)
Q Consensus       102 --~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (488)
                        ..++.|.+||+.+++....+..+..........+.                                           
T Consensus        92 ~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~-------------------------------------------  128 (373)
T d2madh_          92 KGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSW-------------------------------------------  128 (373)
T ss_pred             ccccceEEEEEECCCCcEEEEEecCCcceeEeccCCC-------------------------------------------
Confidence              12678999999999987776554322111110000                                           


Q ss_pred             ccccCCCceeecCCCccccceeeeeeeCCCcEEEEE--CCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEE
Q psy14511        180 RKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVA--LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLA  257 (488)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~  257 (488)
                                           ...+...+..++...  .++.+.+|+....+.....       ....++.++|+++.++
T Consensus       129 ---------------------~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~s~~g~~~~  180 (373)
T d2madh_         129 ---------------------MNANTPNNADLLFFQFAAGPAVGLVVQGGSSDDQLL-------SSPTCYHIHPGAPSTF  180 (373)
T ss_pred             ---------------------cEEEEeCCCcEEEEEEcCCCceEEeeccCCeEEEEe-------ccceeEEEecCCCcEE
Confidence                                 001122223333333  4567888888776654432       3456889999998877


Q ss_pred             EEeCCCCcEEEEECCcceeeeeecccc------ccEEEEEe-cCCEEEEeecCCeEEEEECcCCCc-cceeeecCCccEE
Q psy14511        258 VTNTCTEYIDLWHEQEERLIQKLRTHM------HQVIAMCW-NGNLLSCGTIGGNILHYDVRTHSD-YPTAITREGDVVC  329 (488)
Q Consensus       258 ~~~~~~~~i~i~d~~~~~~~~~~~~~~------~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~i~  329 (488)
                      ++.+.|+.+.+|+...++.......+.      .....+.+ .+..++..+.++.+++|+...... .......+.....
T Consensus       181 v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~  260 (373)
T d2madh_         181 YLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRK  260 (373)
T ss_pred             EEEcCCCeEEEEEcCCceeeEEEeeeccccCccceeeeEEECCCceEEEecCCceEEEEEcCCCeEEEEEeeccccCcEE
Confidence            665899999999998877665543321      12233444 345566777889999999887542 1222333344444


Q ss_pred             EEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccE
Q psy14511        330 GLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERI  408 (488)
Q Consensus       330 ~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v  408 (488)
                      ...+.|.+...+..+ ++....+-                 ..++..++.  ...++.+.+||..+++.+..+. +...+
T Consensus       261 ~~~~~~~~~~~~~~~~d~~~~~~~-----------------~~~~~~~~~--~~~~~~v~~~d~~t~~~~~~~~-~~~~~  320 (373)
T d2madh_         261 ADTWRPGGWQQVAYLKSSDGIYLL-----------------TSEQSAWKL--HAAAKEVTSVTGLVGQTSSQIS-LGHDV  320 (373)
T ss_pred             eeeeccCcceeeEEecCCCeEEEe-----------------cCCCceEEe--ecCCCeEEEEECCCCcEEEEec-CCCCe
Confidence            555555554444444 33322221                 122334444  5678899999999999988776 56678


Q ss_pred             EEEEEcCCCCE--EEEEeCCCcEEEEecCCCCccccc-cccCCcceEEeec
Q psy14511        409 LSAVLSPDQTC--VAAASADETISIWNCFPRDKKRKA-RQVGSGSSLEFAI  456 (488)
Q Consensus       409 ~~~~~s~~~~~--l~t~~~dg~v~iw~~~~~~~~~~~-~~~~~v~~~~~s~  456 (488)
                      ..++|+|||+.  +++++.|+.|++||+.+++..... .+....+.+++..
T Consensus       321 ~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~~~~~~~g~~P~~l~~~~  371 (373)
T d2madh_         321 DAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELGSGPQVLSVMN  371 (373)
T ss_pred             eEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEECCCCCCCcEEEEec
Confidence            99999999984  468899999999999999988654 3556666666543

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=1.2e-21  Score=173.70  Aligned_cols=281  Identities=12%  Similarity=0.104  Sum_probs=184.6

Q ss_pred             eEEEeecCCeEEEEEcccCcccc-eeecccCceEEEEEEccCCcEEEEec--CCeEEEEeccccCcCCCcccccccccce
Q psy14511          7 LLSCGTIGGNILHYDVRTHSDYP-TAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAKRPQVNNQCHLSAV   83 (488)
Q Consensus         7 ~la~g~~dg~i~iwd~~~~~~~~-~~~~~h~~~V~~l~~sp~g~~las~~--d~~i~vwd~~~~~~~~~~~~~~~h~~~v   83 (488)
                      .+++++.|++|+||++.+...+. .....|.+.+..|+|||||++|++++  |+.|++|++..............+...+
T Consensus         6 v~v~~~~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~p   85 (333)
T d1ri6a_           6 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSL   85 (333)
T ss_dssp             EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCC
T ss_pred             EEEECCCCCcEEEEEEcCCCCeEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCCc
Confidence            45677899999999998654332 12246888999999999999996654  8999999998644332222222344567


Q ss_pred             eEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecccc
Q psy14511         84 KAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSK  163 (488)
Q Consensus        84 ~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (488)
                      ..++|+|||++|++++..  ++.+.+|+..........                                          
T Consensus        86 ~~l~~spDg~~l~v~~~~--~~~v~~~~~~~~~~~~~~------------------------------------------  121 (333)
T d1ri6a_          86 THISTDHQGQFVFVGSYN--AGNVSVTRLEDGLPVGVV------------------------------------------  121 (333)
T ss_dssp             SEEEECTTSSEEEEEETT--TTEEEEEEEETTEEEEEE------------------------------------------
T ss_pred             eEEEEcCCCCEEeecccC--CCceeeeccccccceecc------------------------------------------
Confidence            889999999999988764  788999987655422111                                          


Q ss_pred             ccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCc
Q psy14511        164 RTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAY  243 (488)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~  243 (488)
                                                                                             .... +...
T Consensus       122 -----------------------------------------------------------------------~~~~-~~~~  129 (333)
T d1ri6a_         122 -----------------------------------------------------------------------DVVE-GLDG  129 (333)
T ss_dssp             -----------------------------------------------------------------------EEEC-CCTT
T ss_pred             -----------------------------------------------------------------------cccC-CCcc
Confidence                                                                                   1111 4456


Q ss_pred             eEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCccceeeec
Q psy14511        244 ISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITR  323 (488)
Q Consensus       244 i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~  323 (488)
                      +.++.++|++++++++...+..+.+|+............                                   ......
T Consensus       130 ~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-----------------------------------~~~~~~  174 (333)
T d1ri6a_         130 CHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDP-----------------------------------AEVTTV  174 (333)
T ss_dssp             BCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEE-----------------------------------EEEECS
T ss_pred             ceEEEeeecceeeeccccccceeeEEEeccCCcceeeec-----------------------------------eeeeee
Confidence            778899999999988856667788888655322111100                                   000011


Q ss_pred             CCccEEEEEEccCCcEEEEEe-c-CeEEEEECCCCCCCccc---------------ceeeeeecCCCCEEEEEccCCCCe
Q psy14511        324 EGDVVCGLKWSPNGRYLASGS-N-NTVKIWDFRQLDAKRPL---------------GLIVPKLKREGRELVTSHGKQDCS  386 (488)
Q Consensus       324 ~~~~i~~~~~s~~~~~l~~~~-d-~~i~iwd~~~~~~~~~~---------------~~~~~~~~~~~~~l~~~~g~~~~~  386 (488)
                      .......++|++++.+++... . +...+|+..........               ......++++++++++. +..++.
T Consensus       175 ~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~~~~-~~~~~~  253 (333)
T d1ri6a_         175 EGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYAC-DRTASL  253 (333)
T ss_dssp             TTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEE-ETTTTE
T ss_pred             cCCCccEEEEeccceeEEeeccccCceEEEeecccccceeeeeeeeeeecCCCccccceeEEEecccCceeee-cccCCe
Confidence            122345678888888777665 3 77777776543211100               01112789999988876 577889


Q ss_pred             EEEEeCCCcceeEEEee---ccccEEEEEEcCCCCEEEEEe-CCCcEEEEecC--CCCc
Q psy14511        387 LKMWEYPRLHLIEELKI---HQERILSAVLSPDQTCVAAAS-ADETISIWNCF--PRDK  439 (488)
Q Consensus       387 i~i~d~~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~t~~-~dg~v~iw~~~--~~~~  439 (488)
                      +.+|++..........+   +...+.+++|+|||++|++++ .++.|++|+++  +++.
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~spDGk~l~va~~~~~~v~v~~id~~tG~l  312 (333)
T d1ri6a_         254 ITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLL  312 (333)
T ss_dssp             EEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEE
T ss_pred             EEEEEEcCCCCEEEEEEEeCCCCCeeEEEEeCCCCEEEEEECCCCeEEEEEEECCCCcE
Confidence            99998876543333332   345678899999999987765 46889999664  4543

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.89  E-value=8.7e-23  Score=182.08  Aligned_cols=304  Identities=13%  Similarity=0.047  Sum_probs=208.6

Q ss_pred             EEEccCCcEEEEec-CCeEEEEeccccCcCCCccccc-ccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeee
Q psy14511         42 LKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQ-CHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKC  119 (488)
Q Consensus        42 l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~-~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~  119 (488)
                      ++|+++++||++++ ++.|.|||+++++.   +.++. .|...+.+++|+|||+++++++..  ++.|.+||+.+++...
T Consensus         2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~~~---~~t~~~~~~~~p~~l~~spDG~~l~v~~~~--~~~v~~~d~~t~~~~~   76 (346)
T d1jmxb_           2 PALKAGHEYMIVTNYPNNLHVVDVASDTV---YKSCVMPDKFGPGTAMMAPDNRTAYVLNNH--YGDIYGIDLDTCKNTF   76 (346)
T ss_dssp             CCCCTTCEEEEEEETTTEEEEEETTTTEE---EEEEECSSCCSSCEEEECTTSSEEEEEETT--TTEEEEEETTTTEEEE
T ss_pred             ccCCCCCcEEEEEcCCCEEEEEECCCCCE---EEEEEcCCCCCcceEEECCCCCEEEEEECC--CCcEEEEeCccCeeee
Confidence            57999999999998 99999999998543   33333 355678899999999999888764  8999999999988765


Q ss_pred             eeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccc
Q psy14511        120 HVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDF  199 (488)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (488)
                      .+.......                                                                       
T Consensus        77 ~~~~~~~~~-----------------------------------------------------------------------   85 (346)
T d1jmxb_          77 HANLSSVPG-----------------------------------------------------------------------   85 (346)
T ss_dssp             EEESCCSTT-----------------------------------------------------------------------
T ss_pred             eeccccccc-----------------------------------------------------------------------
Confidence            543321100                                                                       


Q ss_pred             eeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEe-----------CCCCcEEE
Q psy14511        200 YTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTN-----------TCTEYIDL  268 (488)
Q Consensus       200 ~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-----------~~~~~i~i  268 (488)
                                                      .       ....+..++|+|||++++++.           ..++.+.+
T Consensus        86 --------------------------------~-------~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~  126 (346)
T d1jmxb_          86 --------------------------------E-------VGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEV  126 (346)
T ss_dssp             --------------------------------E-------EEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEE
T ss_pred             --------------------------------c-------cCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEE
Confidence                                            0       111234578889998887762           24778889


Q ss_pred             EECCcceeeeeecccc--ccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe
Q psy14511        269 WHEQEERLIQKLRTHM--HQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS  344 (488)
Q Consensus       269 ~d~~~~~~~~~~~~~~--~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~  344 (488)
                      |+..+++....+..+.  ..+..+.+  ++..+++   ++.+.+|+..+++ ....+..+. ....+.++|++..+....
T Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~  201 (346)
T d1jmxb_         127 FSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVA---GPDIYKMDVKTGK-YTVALPLRN-WNRKGYSAPDVLYFWPHQ  201 (346)
T ss_dssp             EEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEEE---SSSEEEECTTTCC-EEEEECSTT-CCCTTBCCCBCCCCCCCC
T ss_pred             EecccceeeeEEEeeeccCceEEEEecCCCEEEEe---CCcceEEEccCCC-EEEEEecCC-CccceEEeccccEEEEEe
Confidence            9988876655443322  22333344  3444443   3458899998754 344444433 345677889988776655


Q ss_pred             -c-CeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeE-EEeeccccEEEEEEcCCCCEEE
Q psy14511        345 -N-NTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIE-ELKIHQERILSAVLSPDQTCVA  421 (488)
Q Consensus       345 -d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~-~~~~~~~~v~~~~~s~~~~~l~  421 (488)
                       . +.+.+++....            +.+....+..  +..+..+.+||..++.... .+..|...+..+.+++++.+++
T Consensus       202 ~~~~~~~~~~~~~~------------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (346)
T d1jmxb_         202 SPRHEFSMLYTIAR------------FKDDKQDPAT--ADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQI  267 (346)
T ss_dssp             CTTCEEEEEEEEEE------------C-------CC--CEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEE
T ss_pred             cCCCceEeeeeeee------------eccCceeEee--ccCCceEEEEECCCCceEEEEeecccceeEEEEEeCCCCEEE
Confidence             3 67766654321            1222223333  4556779999999887654 4556788899999999999988


Q ss_pred             EEeCCCcEEEEecCCCCccccccccCCcceEEeecCCCceEEEEeeecccccceeeEEEEeecccc
Q psy14511        422 AASADETISIWNCFPRDKKRKARQVGSGSSLEFAILKQPVSLTALLRSRAVEKQQHAIAYTVFGEA  487 (488)
Q Consensus       422 t~~~dg~v~iw~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~  487 (488)
                      .... +.|.+||..+++......+...+.+++|+|||+.+..       +..+..+.|+..++++.
T Consensus       268 ~~~~-~~v~v~d~~~~~~~~~~~~~~~~~~va~s~DG~~l~v-------~~~d~~v~v~D~~t~~~  325 (346)
T d1jmxb_         268 YGVL-NRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYL-------GGTFNDLAVFNPDTLEK  325 (346)
T ss_dssp             EEEE-SEEEEEETTTTEEEEEEECSSCCCEEEECSSSSCEEE-------ESBSSEEEEEETTTTEE
T ss_pred             EecC-CeEEEEECCCCcEEEEEcCCCCEEEEEEcCCCCEEEE-------EeCCCcEEEEECccCCE
Confidence            7764 5799999999998877777788999999999999843       33455677787777764

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.88  E-value=2.1e-20  Score=165.68  Aligned_cols=265  Identities=12%  Similarity=0.021  Sum_probs=193.6

Q ss_pred             cEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccE--
Q psy14511        210 DTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQV--  287 (488)
Q Consensus       210 ~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v--  287 (488)
                      .+++++.|++|.+||+.+++....+..+. +...+.+++|+|||++++++++.++.|.+||+.+++.+..+..+....  
T Consensus         3 ~~vt~~~d~~v~v~D~~s~~~~~~i~~~~-~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~   81 (337)
T d1pbyb_           3 YILAPARPDKLVVIDTEKMAVDKVITIAD-AGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV   81 (337)
T ss_dssp             EEEEEETTTEEEEEETTTTEEEEEEECTT-CTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred             EEEEEcCCCEEEEEECCCCeEEEEEECCC-CCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCcccc
Confidence            47888899999999999999988887765 556688999999999987665889999999999999888876554322  


Q ss_pred             ---EEEEe--cCCEEEEee------------cCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeEEE
Q psy14511        288 ---IAMCW--NGNLLSCGT------------IGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKI  350 (488)
Q Consensus       288 ---~~~~~--~~~~l~~~~------------~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~i  350 (488)
                         ..+++  +++.++++.            .+..+.+||..+.. ....+.. ...+..++|+|+|+++++++ +.+.+
T Consensus        82 ~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~-~~~~~~~~~s~dg~~l~~~~-~~~~~  158 (337)
T d1pbyb_          82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLS-RRKAFEA-PRQITMLAWARDGSKLYGLG-RDLHV  158 (337)
T ss_dssp             ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTE-EEEEEEC-CSSCCCEEECTTSSCEEEES-SSEEE
T ss_pred             cceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCe-EEEeccc-cCCceEEEEcCCCCEEEEEc-CCcce
Confidence               34455  678887765            35678899998753 3444443 34577899999999998876 45778


Q ss_pred             EECCCCCCCccccee----eeeecCCCCEEEE-------------E---------ccCCCCeEEEEeCCCcceeE-EEee
Q psy14511        351 WDFRQLDAKRPLGLI----VPKLKREGRELVT-------------S---------HGKQDCSLKMWEYPRLHLIE-ELKI  403 (488)
Q Consensus       351 wd~~~~~~~~~~~~~----~~~~~~~~~~l~~-------------~---------~g~~~~~i~i~d~~~~~~~~-~~~~  403 (488)
                      ||..+.+....+...    ...++|++..+..             .         .+..++.+.+|+..+++... .+..
T Consensus       159 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (337)
T d1pbyb_         159 MDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRI  238 (337)
T ss_dssp             EETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEE
T ss_pred             eeeecCcEEEEeecCCccccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcEEEEEecC
Confidence            998876433322111    0123333222111             0         12334568999999887654 3556


Q ss_pred             ccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccccccccCCcceEEeecCCCceEEEEeeecccccceeeEEEEee
Q psy14511        404 HQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKARQVGSGSSLEFAILKQPVSLTALLRSRAVEKQQHAIAYTV  483 (488)
Q Consensus       404 ~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~~  483 (488)
                      +...+..+.++|++.+++.+  ++.|++||+.+++......+...+.+++|+|||+.+...       ..+..+.++..+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dG~~l~v~-------~~~~~i~v~D~~  309 (337)
T d1pbyb_         239 MDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLG-------GALGDLAAYDAE  309 (337)
T ss_dssp             CSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEE-------SBSSEEEEEETT
T ss_pred             CCcceEEEEecccceEEEEc--cccEEEEECCCCcEEEEEcCCCCEEEEEECCCCCEEEEE-------eCCCcEEEEECC
Confidence            67788999999999998776  588999999999998877888889999999999988432       345557777777


Q ss_pred             cccc
Q psy14511        484 FGEA  487 (488)
Q Consensus       484 ~g~~  487 (488)
                      ++|.
T Consensus       310 t~~~  313 (337)
T d1pbyb_         310 TLEK  313 (337)
T ss_dssp             TCCE
T ss_pred             CCcE
Confidence            7664

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.88  E-value=7.7e-21  Score=170.05  Aligned_cols=307  Identities=11%  Similarity=-0.039  Sum_probs=188.6

Q ss_pred             ccCCceEEEee-----cCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-----------CCeEEEEecc
Q psy14511          2 CWNGNLLSCGT-----IGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-----------NNTVKIWDFR   65 (488)
Q Consensus         2 ~~dg~~la~g~-----~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-----------d~~i~vwd~~   65 (488)
                      +.||+.+++..     .++.|.+||..+++.+. .+..+..  ..++|||||++|++++           |+.|++||..
T Consensus        10 spdg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~-~~~~g~~--~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~   86 (355)
T d2bbkh_          10 APDARRVYVNDPAHFAAVTQQFVIDGEAGRVIG-MIDGGFL--PNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPV   86 (355)
T ss_dssp             CCCTTEEEEEECGGGCSSEEEEEEETTTTEEEE-EEEECSS--CEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred             CCCCCEEEEEecccCCCcCeEEEEECCCCcEEE-EEECCCC--CceEEcCCCCEEEEEeCCCccccccCCCCEEEEEECC
Confidence            45899887643     46689999999988554 4555443  3699999999887642           6789999999


Q ss_pred             ccCcCCCcccccc----cccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccc
Q psy14511         66 QLDAKRPQVNNQC----HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKR  141 (488)
Q Consensus        66 ~~~~~~~~~~~~~----h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (488)
                      +++....+.....    .......++|+|+++++++.... .+..+.+|+..+++....+.....               
T Consensus        87 t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---------------  150 (355)
T d2bbkh_          87 TLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS-PAPAVGVVDLEGKAFKRMLDVPDC---------------  150 (355)
T ss_dssp             TCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS-SSCEEEEEETTTTEEEEEEECCSE---------------
T ss_pred             CCCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCC-CCceeeeeecCCCcEeeEEecCCc---------------
Confidence            8654433322111    12234678999999988766432 267899999988876655433200               


Q ss_pred             eeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEE
Q psy14511        142 RHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVY  221 (488)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~  221 (488)
                                                                                                      
T Consensus       151 --------------------------------------------------------------------------------  150 (355)
T d2bbkh_         151 --------------------------------------------------------------------------------  150 (355)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEE
Q psy14511        222 TWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSC  299 (488)
Q Consensus       222 iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~  299 (488)
                               ....     .......+.++++++.+++....++.+.+++.......     +...+....+  ++..++.
T Consensus       151 ---------~~~~-----~~~~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~  211 (355)
T d2bbkh_         151 ---------YHIF-----PTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPE-----DEFLINHPAYSQKAGRLVW  211 (355)
T ss_dssp             ---------EEEE-----EEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCT-----TSCBCSCCEEETTTTEEEE
T ss_pred             ---------ceEe-----ecCCcceEEEcCCCCEEEEEecCCCeEEEEecccccce-----ecceeeeccccCCCCeEEE
Confidence                     0000     11123345667777777666445555666655443221     1112222223  5677777


Q ss_pred             eecCCeEEEEECcCCCcc-ceeeecCCccE----------EEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeee
Q psy14511        300 GTIGGNILHYDVRTHSDY-PTAITREGDVV----------CGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVP  367 (488)
Q Consensus       300 ~~~dg~i~i~d~~~~~~~-~~~~~~~~~~i----------~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~  367 (488)
                      ++.++.+++|++..+... ......+....          ..++++|++..++... ++...+                 
T Consensus       212 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~-----------------  274 (355)
T d2bbkh_         212 PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWR-----------------  274 (355)
T ss_dssp             EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTC-----------------
T ss_pred             ecCCCeEEEEecCCCcEEEEeccCCcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCcee-----------------
Confidence            788888888888765421 11122222111          2345555555544432 110000                 


Q ss_pred             eecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCC--EEEEEeCCCcEEEEecCCCCcccccc-
Q psy14511        368 KLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQT--CVAAASADETISIWNCFPRDKKRKAR-  444 (488)
Q Consensus       368 ~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~--~l~t~~~dg~v~iw~~~~~~~~~~~~-  444 (488)
                                .  ......|.+||..+++.+..+.. ...+.+++|+|||+  ++++++.|+.|++||+++++.+.... 
T Consensus       275 ----------~--~~~~~~v~v~d~~t~~~~~~~~~-~~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~~~~~i~~  341 (355)
T d2bbkh_         275 ----------H--KTASRFVVVLDAKTGERLAKFEM-GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQ  341 (355)
T ss_dssp             ----------T--TSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEECC
T ss_pred             ----------e--cCCCCeEEEEeCCCCcEEEEecC-CCCEEEEEEcCCCCeEEEEEECCCCEEEEEECCCCCEEEEEeC
Confidence                      0  23346799999999998888764 45588999999998  45677789999999999999876554 


Q ss_pred             ccCCcceEEeec
Q psy14511        445 QVGSGSSLEFAI  456 (488)
Q Consensus       445 ~~~~v~~~~~s~  456 (488)
                      +......+.+..
T Consensus       342 ~G~~p~~i~~~d  353 (355)
T d2bbkh_         342 LGHGPQVITTAD  353 (355)
T ss_dssp             CCSSCCEEECCC
T ss_pred             cCCCccEEEeCC
Confidence            444445554443

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.85  E-value=6.3e-18  Score=151.94  Aligned_cols=308  Identities=8%  Similarity=-0.107  Sum_probs=184.4

Q ss_pred             ccCCceEEEe-----ecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-----------CCeEEEEecc
Q psy14511          2 CWNGNLLSCG-----TIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-----------NNTVKIWDFR   65 (488)
Q Consensus         2 ~~dg~~la~g-----~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-----------d~~i~vwd~~   65 (488)
                      +.||+.+++.     +..+.|.+||..+++.+. .+..+..+  .++|||||++|+++.           ++.|.+||..
T Consensus        29 spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~-~~~~~~~~--~~a~SpDG~~l~va~~~~~~~~~~~~~~~v~v~D~~  105 (373)
T d2madh_          29 GADGRRSYINLPAHHSAIIQQWVLDAGSGSILG-HVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPV  105 (373)
T ss_pred             CCCCCEEEEEcccccCCCceEEEEECCCCCEEE-EEeCCCCc--cEEEcCCCCEEEEEeecCCcccccccceEEEEEECC
Confidence            4589988764     245679999999998554 45555443  799999999998864           4789999999


Q ss_pred             ccCcCCCcccccccccc-------eeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCcccccccccccc
Q psy14511         66 QLDAKRPQVNNQCHLSA-------VKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQ  138 (488)
Q Consensus        66 ~~~~~~~~~~~~~h~~~-------v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  138 (488)
                      +++....+   ..+...       ...+.|+++++.+++.... .++.+.+|+....+.........    ...      
T Consensus       106 t~~~~~~~---~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~----~~~------  171 (373)
T d2madh_         106 TFLPIADI---ELPDAPRFDVGPYSWMNANTPNNADLLFFQFA-AGPAVGLVVQGGSSDDQLLSSPT----CYH------  171 (373)
T ss_pred             CCcEEEEE---ecCCcceeEeccCCCcEEEEeCCCcEEEEEEc-CCCceEEeeccCCeEEEEeccce----eEE------
Confidence            86543322   222222       2457889998876655431 26788888887766443332210    000      


Q ss_pred             ccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCC-cEEEEECC
Q psy14511        139 KKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYH-DTLAVALD  217 (488)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d  217 (488)
                                                                                       +...+. .+++.+.|
T Consensus       172 -----------------------------------------------------------------~s~~g~~~~v~~~~d  186 (373)
T d2madh_         172 -----------------------------------------------------------------IHPGAPSTFYLLCAQ  186 (373)
T ss_pred             -----------------------------------------------------------------EecCCCcEEEEEcCC
Confidence                                                                             111122 34567799


Q ss_pred             CeEEEEECCCCceEEEEecCC---CCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeee--eccccccEEEEEe
Q psy14511        218 TSVYTWNTKTNKTQLLVEYPT---YDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQK--LRTHMHQVIAMCW  292 (488)
Q Consensus       218 ~~v~iw~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~--~~~~~~~v~~~~~  292 (488)
                      +.+.+|+...++.........   ........+.+.+++..+ .. +.++.+.+|+.........  ...+........+
T Consensus       187 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (373)
T d2madh_         187 GGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIV-WP-VYSGKILQADISAAGATNKAPIDALSGGRKADTW  264 (373)
T ss_pred             CeEEEEEcCCceeeEEEeeeccccCccceeeeEEECCCceEE-Ee-cCCceEEEEEcCCCeEEEEEeeccccCcEEeeee
Confidence            999999999887665543211   022234455666666444 44 5788999999877543222  2222222222211


Q ss_pred             --cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCccccee----
Q psy14511        293 --NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLI----  365 (488)
Q Consensus       293 --~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~----  365 (488)
                        .+...++.+.++.                       ....+.+++..++... ++.+.+||..+++....+...    
T Consensus       265 ~~~~~~~~~~~~d~~-----------------------~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~~~~~~~~  321 (373)
T d2madh_         265 RPGGWQQVAYLKSSD-----------------------GIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVD  321 (373)
T ss_pred             ccCcceeeEEecCCC-----------------------eEEEecCCCceEEeecCCCeEEEEECCCCcEEEEecCCCCee
Confidence              1111111111111                       0112223334444444 477888888777544433221    


Q ss_pred             eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCC
Q psy14511        366 VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPD  416 (488)
Q Consensus       366 ~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~  416 (488)
                      ..+|+|||+.++.+++..++.|++||+.+++.+.++..+....+.+++.++
T Consensus       322 ~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~~~~~~~g~~P~~l~~~~~  372 (373)
T d2madh_         322 AISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELGSGPQVLSVMNE  372 (373)
T ss_pred             EEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEECCCCCCCcEEEEecC
Confidence            127888888654444788999999999999999999888777788877554

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.78  E-value=5.9e-17  Score=142.97  Aligned_cols=252  Identities=10%  Similarity=0.074  Sum_probs=172.1

Q ss_pred             EEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeee---ccccccE
Q psy14511        211 TLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKL---RTHMHQV  287 (488)
Q Consensus       211 ~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~---~~~~~~v  287 (488)
                      +++++.++.|++|++........++... +...+..++|+|||++|++++..++.|++|++........+   ..+...+
T Consensus         7 ~v~~~~~~~I~v~~~~~~~~l~~~~~~~-~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~p   85 (333)
T d1ri6a_           7 YIASPESQQIHVWNLNHEGALTLTQVVD-VPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSL   85 (333)
T ss_dssp             EEEEGGGTEEEEEEECTTSCEEEEEEEE-CSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCC
T ss_pred             EEECCCCCcEEEEEEcCCCCeEEEEEEc-CCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCCc
Confidence            3455599999999997654433333222 67789999999999999887577999999998765433222   2233445


Q ss_pred             EEEEe--cCCEEEEeec-CCeEEEEECcCCCc-cceeeecCCccEEEEEEccCCcEEEEEe-c-CeEEEEECCCCCCCcc
Q psy14511        288 IAMCW--NGNLLSCGTI-GGNILHYDVRTHSD-YPTAITREGDVVCGLKWSPNGRYLASGS-N-NTVKIWDFRQLDAKRP  361 (488)
Q Consensus       288 ~~~~~--~~~~l~~~~~-dg~i~i~d~~~~~~-~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d-~~i~iwd~~~~~~~~~  361 (488)
                      ..+++  ||++|++++. ++.+.+|+...... .......+...+.++.++|++++++.++ + ..+.+|+.........
T Consensus        86 ~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~  165 (333)
T d1ri6a_          86 THISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVA  165 (333)
T ss_dssp             SEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEE
T ss_pred             eEEEEcCCCCEEeecccCCCceeeeccccccceecccccCCCccceEEEeeecceeeeccccccceeeEEEeccCCccee
Confidence            56777  7888888875 67899998876432 2233345566678899999999999888 4 8899999876543221


Q ss_pred             ccee-----------eeeecCCCCEEEEEccCCCCeEEEEeCCCcc----eeEEEe------eccccEEEEEEcCCCCEE
Q psy14511        362 LGLI-----------VPKLKREGRELVTSHGKQDCSLKMWEYPRLH----LIEELK------IHQERILSAVLSPDQTCV  420 (488)
Q Consensus       362 ~~~~-----------~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~----~~~~~~------~~~~~v~~~~~s~~~~~l  420 (488)
                      ....           ..+|++++..++.. ....+...+++.....    ....+.      ........+++++|++++
T Consensus       166 ~~~~~~~~~~g~~p~~i~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~  244 (333)
T d1ri6a_         166 QDPAEVTTVEGAGPRHMVFHPNEQYAYCV-NELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHL  244 (333)
T ss_dssp             EEEEEEECSTTCCEEEEEECTTSSEEEEE-ETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEE
T ss_pred             eeceeeeeecCCCccEEEEeccceeEEee-ccccCceEEEeecccccceeeeeeeeeeecCCCccccceeEEEecccCce
Confidence            1111           12788999888775 5567778888764422    112221      123456788999999977


Q ss_pred             EEE-eCCCcEEEEecCCCCccc----cccccCCcceEEeecCCCceEEE
Q psy14511        421 AAA-SADETISIWNCFPRDKKR----KARQVGSGSSLEFAILKQPVSLT  464 (488)
Q Consensus       421 ~t~-~~dg~v~iw~~~~~~~~~----~~~~~~~v~~~~~s~~~~~~~~~  464 (488)
                      +.. ..++.+.+|++.......    .......+.+++|+|||+.+...
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~spDGk~l~va  293 (333)
T d1ri6a_         245 YACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAA  293 (333)
T ss_dssp             EEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEE
T ss_pred             eeecccCCeEEEEEEcCCCCEEEEEEEeCCCCCeeEEEEeCCCCEEEEE
Confidence            665 466899999998665442    22334567899999999987443

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.78  E-value=1.7e-16  Score=147.13  Aligned_cols=107  Identities=13%  Similarity=0.170  Sum_probs=83.7

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccc----eeecccCceEEEEEEccCCcEEEEec----------CCeEEEEeccccCc
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYP----TAITREGDVVCGLKWSPNGRYLASGS----------NNTVKIWDFRQLDA   69 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~----~~~~~h~~~V~~l~~sp~g~~las~~----------d~~i~vwd~~~~~~   69 (488)
                      |++++..  .++.+.+||+.+++...    ..+..|...|.++.|||||++|+.++          ++.+.|||+.+++.
T Consensus        27 d~~~~~~--~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~~  104 (470)
T d2bgra1          27 DHEYLYK--QENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQL  104 (470)
T ss_dssp             SSEEEEE--SSSCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE
T ss_pred             CCEEEEE--cCCcEEEEECCCCCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEECCCCcc
Confidence            6776654  47889999999987532    13455667899999999999999875          36789999997543


Q ss_pred             CCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeee
Q psy14511         70 KRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCH  120 (488)
Q Consensus        70 ~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~  120 (488)
                      .    .+..|...+..+.|||||+.++...    ++.+.+|+..+++..+.
T Consensus       105 ~----~l~~~~~~~~~~~~SPDG~~ia~~~----~~~l~~~~~~~g~~~~~  147 (470)
T d2bgra1         105 I----TEERIPNNTQWVTWSPVGHKLAYVW----NNDIYVKIEPNLPSYRI  147 (470)
T ss_dssp             C----CSSCCCTTEEEEEECSSTTCEEEEE----TTEEEEESSTTSCCEEC
T ss_pred             c----ccccCCccccccccccCcceeeEee----cccceEEECCCCceeee
Confidence            2    3566888999999999999887754    78999999988875443

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.77  E-value=1.3e-16  Score=142.25  Aligned_cols=300  Identities=7%  Similarity=-0.051  Sum_probs=168.4

Q ss_pred             EEEEEEccCCcEEEEec------CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCC-------cccc
Q psy14511         39 VCGLKWSPNGRYLASGS------NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGG-------ICDQ  105 (488)
Q Consensus        39 V~~l~~sp~g~~las~~------d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~-------~~d~  105 (488)
                      +.-.+.+|||+.++...      +..|.+||..+++...   ++..  +....++|+|||+++++++..       ..|+
T Consensus         4 ~~~~a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~---~~~~--g~~~~~a~SpDg~~l~v~~~~~~~~~~g~~d~   78 (355)
T d2bbkh_           4 RILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIG---MIDG--GFLPNPVVADDGSFIAHASTVFSRIARGERTD   78 (355)
T ss_dssp             CBCCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEE---EEEE--CSSCEEEECTTSSCEEEEEEEEEETTEEEEEE
T ss_pred             cEeEeeCCCCCEEEEEecccCCCcCeEEEEECCCCcEEE---EEEC--CCCCceEEcCCCCEEEEEeCCCccccccCCCC
Confidence            33446789999887642      5689999998865333   3333  344479999999988776421       1267


Q ss_pred             eEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCC
Q psy14511        106 TVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAK  185 (488)
Q Consensus       106 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (488)
                      .|++||+.+++....+..+.....                                                        
T Consensus        79 ~v~v~D~~t~~~~~~~~~~~~~~~--------------------------------------------------------  102 (355)
T d2bbkh_          79 YVEVFDPVTLLPTADIELPDAPRF--------------------------------------------------------  102 (355)
T ss_dssp             EEEEECTTTCCEEEEEEETTCCCC--------------------------------------------------------
T ss_pred             EEEEEECCCCCEEEEEecCCccee--------------------------------------------------------
Confidence            788888877776554433211000                                                        


Q ss_pred             CceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEe-CCCC
Q psy14511        186 PERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTN-TCTE  264 (488)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~~~~  264 (488)
                                                                       .    .......++|+|+++++++.. +.+.
T Consensus       103 -------------------------------------------------~----~~~~~~~~~~s~dg~~~~v~~~~~~~  129 (355)
T d2bbkh_         103 -------------------------------------------------L----VGTYPWMTSLTPDGKTLLFYQFSPAP  129 (355)
T ss_dssp             -------------------------------------------------C----BSCCGGGEEECTTSSEEEEEECSSSC
T ss_pred             -------------------------------------------------e----cCCCCceEEEecCCCeeEEecCCCCc
Confidence                                                             0    111234578999999888763 3456


Q ss_pred             cEEEEECCcceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCcccee-----eecCCccEEEEEEccCCcE
Q psy14511        265 YIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTA-----ITREGDVVCGLKWSPNGRY  339 (488)
Q Consensus       265 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-----~~~~~~~i~~~~~s~~~~~  339 (488)
                      .+.+|+..+++.+..+..+.... .........++.+.|+...++...........     ...+...+....+++++..
T Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (355)
T d2bbkh_         130 AVGVVDLEGKAFKRMLDVPDCYH-IFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGR  208 (355)
T ss_dssp             EEEEEETTTTEEEEEEECCSEEE-EEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTE
T ss_pred             eeeeeecCCCcEeeEEecCCcce-EeecCCcceEEEcCCCCEEEEEecCCCeEEEEecccccceecceeeeccccCCCCe
Confidence            88999999988877765433221 11112233333334444333333222111000     0111222333444555555


Q ss_pred             EEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEE--eeccccEEEEEEcCC
Q psy14511        340 LASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEEL--KIHQERILSAVLSPD  416 (488)
Q Consensus       340 l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~--~~~~~~v~~~~~s~~  416 (488)
                      ++.++ ++.+++|++....                             +.+++..++......  .........++++|+
T Consensus       209 ~~~~~~~~~~~v~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d  259 (355)
T d2bbkh_         209 LVWPTYTGKIHQIDLSSGD-----------------------------AKFLPAVEALTEAERADGWRPGGWQQVAYHRA  259 (355)
T ss_dssp             EEEEBTTSEEEEEECTTSS-----------------------------CEECCCEESSCHHHHHTTEEECSSSCEEEETT
T ss_pred             EEEecCCCeEEEEecCCCc-----------------------------EEEEeccCCcccceEeeeeeccceEEEEEeCC
Confidence            55544 3555565554321                             111111111000000  001122345888999


Q ss_pred             CCEEEEEeCC----------CcEEEEecCCCCccccccccCCcceEEeecCCCceEEEEeeecccccceeeEEEEeeccc
Q psy14511        417 QTCVAAASAD----------ETISIWNCFPRDKKRKARQVGSGSSLEFAILKQPVSLTALLRSRAVEKQQHAIAYTVFGE  486 (488)
Q Consensus       417 ~~~l~t~~~d----------g~v~iw~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~  486 (488)
                      +..++....+          ..|.+||..+++..........+.+++|+|||+.+.+     ..+..+..+.++..++|+
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~~~~~~~~~a~spDG~~~l~-----v~~~~d~~i~v~D~~tg~  334 (355)
T d2bbkh_         260 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLY-----ALSTGDKTLYIHDAESGE  334 (355)
T ss_dssp             TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEE-----EEETTTTEEEEEETTTCC
T ss_pred             CCeEEEEeccCCceeecCCCCeEEEEeCCCCcEEEEecCCCCEEEEEEcCCCCeEEE-----EEECCCCEEEEEECCCCC
Confidence            9988776544          3699999999988876667777899999999986422     223345667777777776


Q ss_pred             c
Q psy14511        487 A  487 (488)
Q Consensus       487 ~  487 (488)
                      .
T Consensus       335 ~  335 (355)
T d2bbkh_         335 E  335 (355)
T ss_dssp             E
T ss_pred             E
Confidence            4

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.75  E-value=1.1e-16  Score=143.25  Aligned_cols=206  Identities=7%  Similarity=-0.078  Sum_probs=138.0

Q ss_pred             EEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCccce-----e
Q psy14511        246 CVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPT-----A  320 (488)
Q Consensus       246 ~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-----~  320 (488)
                      .++|+|||++++++...++.+.+||+.+++....+..+..... .......++..+.||.+.++++........     .
T Consensus       128 ~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~  206 (368)
T d1mdah_         128 IIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHI-HPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQC  206 (368)
T ss_dssp             SEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCC-EEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCS
T ss_pred             ceEECCCCCEEEEEeCCCCeEEEEECCCCcEeEEeeccCcceE-ccCCCceEEEEcCCCCEEEEEecCCceeeeeeeccc
Confidence            5899999999998855789999999999988888765443321 112456777888899999998876543221     1


Q ss_pred             eecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCc----------ccc-------eeeeeecCCCCEEEEEccC-
Q psy14511        321 ITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKR----------PLG-------LIVPKLKREGRELVTSHGK-  382 (488)
Q Consensus       321 ~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~----------~~~-------~~~~~~~~~~~~l~~~~g~-  382 (488)
                      ...+...+..+.+.+++..+... .+.+.+++........          ...       ....++++++..++++... 
T Consensus       207 ~~~~~~~~~~~~~~~~g~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~  285 (368)
T d1mdah_         207 TGAQNCSSQAAQANYPGMLVWAV-ASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEH  285 (368)
T ss_dssp             CTTSCBCSCCEEETTTTEEEECB-SSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEEC
T ss_pred             ccccccceeecccccCcEEEEec-CCCEEEEeecCCceEEEeecccccceeeeeeecCCCceeEEEcCCCCEEEEEecCC
Confidence            22233344556777777655432 3455555554332211          000       0122788888887764211 


Q ss_pred             ------CCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCE--EEEEeCCCcEEEEecCCCCccccccccCCcceEEe
Q psy14511        383 ------QDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTC--VAAASADETISIWNCFPRDKKRKARQVGSGSSLEF  454 (488)
Q Consensus       383 ------~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~--l~t~~~dg~v~iw~~~~~~~~~~~~~~~~v~~~~~  454 (488)
                            ....|.+||..+++.+..+.. ...+.+++|+|||+.  ++++..|+.|++||..+++.+.........+.+.+
T Consensus       286 ~~~~~~~~~~v~v~D~~t~~~~~~~~~-~~~~~~~a~spDG~~~ly~s~~~~~~v~v~D~~tgk~~~~i~~g~~P~~l~~  364 (368)
T d1mdah_         286 SRSCLAAAENTSSVTASVGQTSGPISN-GHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKGPESLSV  364 (368)
T ss_dssp             SSCTTSCEEEEEEEESSSCCEEECCEE-EEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSCCCEEEC
T ss_pred             CceeecCCceEEEEECCCCcEeEEecC-CCceeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEEECCCCCCEEEE
Confidence                  124699999999998887763 456899999999973  46677899999999999998866555555555554

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=99.73  E-value=2.2e-18  Score=152.45  Aligned_cols=314  Identities=13%  Similarity=0.080  Sum_probs=193.0

Q ss_pred             CCce-EEEeecCCeEEEEEcccCccccee-----------------------------ecccCceEEEEEEccCCcEEEE
Q psy14511          4 NGNL-LSCGTIGGNILHYDVRTHSDYPTA-----------------------------ITREGDVVCGLKWSPNGRYLAS   53 (488)
Q Consensus         4 dg~~-la~g~~dg~i~iwd~~~~~~~~~~-----------------------------~~~h~~~V~~l~~sp~g~~las   53 (488)
                      |+.+ +++|+.+|+|+|||+.+++.+.++                             -..|........++|||++|..
T Consensus         9 De~y~f~Sgg~sG~V~V~dlpS~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtpDGr~lfV   88 (441)
T d1qnia2           9 DEYYGFWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKYLFI   88 (441)
T ss_dssp             CSEEEEEECBTTCCEEEEEETTTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEEEEEEEE
T ss_pred             CCEEEEEeCCCCCcEEEEeCCCCcEEEEEEeEcCCCCEEEEECCccceEEecccccccCcccCCCcceecccCCCCEEEE
Confidence            4444 568889999999999887644321                             0124445677778999999987


Q ss_pred             ec--CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccc
Q psy14511         54 GS--NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDE  131 (488)
Q Consensus        54 ~~--d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~  131 (488)
                      ..  +++|.++|+++.+..+.+.  ..+...+..++|+|+++++++++..  +..+.+  ...++..             
T Consensus        89 ~d~~~~rVavIDl~t~k~~~ii~--iP~g~gphgi~~spdg~t~YV~~~~--~~~v~~--~~dg~~~-------------  149 (441)
T d1qnia2          89 NDKANTRVARIRLDIMKTDKITH--IPNVQAIHGLRLQKVPKTNYVFCNA--EFVIPQ--PNDGTDF-------------  149 (441)
T ss_dssp             EETTTTEEEEEETTTTEEEEEEE--CTTCCCEEEEEECCSSBCCEEEEEE--CSCEES--SCSSSCC-------------
T ss_pred             EcCCCCEEEEEECCCCcEeeEEe--cCCCCCccceEEeccCCEEEEEecc--CCcccc--cCccccc-------------
Confidence            75  8999999999866443321  2356789999999999966554431  333321  0011100             


Q ss_pred             cccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcE
Q psy14511        132 TISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDT  211 (488)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (488)
                                                  ..                                               .. 
T Consensus       150 ----------------------------~~-----------------------------------------------~~-  153 (441)
T d1qnia2         150 ----------------------------SL-----------------------------------------------DN-  153 (441)
T ss_dssp             ----------------------------CG-----------------------------------------------GG-
T ss_pred             ----------------------------cc-----------------------------------------------cc-
Confidence                                        00                                               00 


Q ss_pred             EEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecccccc-EEEE
Q psy14511        212 LAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQ-VIAM  290 (488)
Q Consensus       212 ~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~-v~~~  290 (488)
                          ....+..+|..+.+....+...    .....++++|+|+++++++.....+..++..+.+....+.....+ ...+
T Consensus       154 ----~~~~~~~iD~~t~~v~~qI~v~----~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~  225 (441)
T d1qnia2         154 ----SYTMFTAIDAETMDVAWQVIVD----GNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAA  225 (441)
T ss_dssp             ----EEEEEEEEETTTCSEEEEEEES----SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHH
T ss_pred             ----ccceEEeecCccceeeEEEecC----CCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEE
Confidence                0023445677777666555543    356789999999999988444334433333222222111100000 0001


Q ss_pred             EecCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe--cCeEEEEECCCCCC-----Cccc-
Q psy14511        291 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDA-----KRPL-  362 (488)
Q Consensus       291 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--d~~i~iwd~~~~~~-----~~~~-  362 (488)
                      ..+|+++..+ .++.+.+++.... .....+..... ...+.++|||+++++++  ++++.+||+.+...     .... 
T Consensus       226 ~~dGk~~~v~-~~~v~vvd~~~~~-~v~~~IPvgks-PhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~  302 (441)
T d1qnia2         226 VKAGNFKTIG-DSKVPVVDGRGES-EFTRYIPVPKN-PHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRD  302 (441)
T ss_dssp             HHTTCCBCCT-TCCCCEEECSSSC-SSEEEECCBSS-CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGG
T ss_pred             ecCCCEEEeC-CCCcEEEEcccCC-ceEEEEeCCCC-ccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccCCcce
Confidence            1156665543 4566777766553 45555655554 56799999999998776  49999999875321     0100 


Q ss_pred             ----------ceeeeeecCCCCEEEEEccCCCCeEEEEeCCC----------cceeEEE-----eeccccEEEEEEcCCC
Q psy14511        363 ----------GLIVPKLKREGRELVTSHGKQDCSLKMWEYPR----------LHLIEEL-----KIHQERILSAVLSPDQ  417 (488)
Q Consensus       363 ----------~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~----------~~~~~~~-----~~~~~~v~~~~~s~~~  417 (488)
                                ......|.++|....+  ...|.+|..|++..          ...+..+     .+|...+.+.+++|||
T Consensus       303 ~~~~~~~~glgplh~~fd~~g~~yts--~~~ds~v~kw~~~~~~~~~~~~~~~~v~~~~~v~y~~GH~~~~~~~t~~pdG  380 (441)
T d1qnia2         303 TIVAEPELGLGPLHTTFDGRGNAYTT--LFIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDADG  380 (441)
T ss_dssp             GEEECCBCCSCEEEEEECSSSEEEEE--ETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCC
T ss_pred             EEEeecccccCcccceecCCceEEEc--ccccceEEEeccchhhhhhccCCCceeEeccccccCCCCCccccccccCCCC
Confidence                      1112388998876655  68899999999742          1233444     5787778888999999


Q ss_pred             CEEEEEeC
Q psy14511        418 TCVAAASA  425 (488)
Q Consensus       418 ~~l~t~~~  425 (488)
                      ++|++++.
T Consensus       381 k~l~s~~k  388 (441)
T d1qnia2         381 KWLVVLSK  388 (441)
T ss_dssp             CEEEEEES
T ss_pred             cEEEecCc
Confidence            99999943

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.67  E-value=6.2e-15  Score=131.68  Aligned_cols=289  Identities=8%  Similarity=-0.121  Sum_probs=165.6

Q ss_pred             cCCce--EE-EeecCC--eEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-----------CCeEEEEeccc
Q psy14511          3 WNGNL--LS-CGTIGG--NILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-----------NNTVKIWDFRQ   66 (488)
Q Consensus         3 ~dg~~--la-~g~~dg--~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-----------d~~i~vwd~~~   66 (488)
                      +||+.  ++ ....+|  .+.+||..+++.+ ..+..+...  .++|+|||++|++++           |+.|.+||..+
T Consensus        29 ~~~~~~~v~~~~~~~g~~~~~~~d~~~~~~~-~~~~~~~~~--~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t  105 (368)
T d1mdah_          29 AISRRSHITLPAYFAGTTENWVSCAGCGVTL-GHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVT  105 (368)
T ss_dssp             CCTTEEEEEECTTTCSSEEEEEEETTTTEEE-EEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTT
T ss_pred             CCCcceeEEeeccCCCcceEEEEeCCCCcEE-EEEeCCCCC--cceECCCCCEEEEEcccCccccccccCCeEEEEECCC
Confidence            46664  33 334444  4667798888855 445555544  589999999888743           57799999988


Q ss_pred             cCcCCCcccc----cccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccce
Q psy14511         67 LDAKRPQVNN----QCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRR  142 (488)
Q Consensus        67 ~~~~~~~~~~----~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (488)
                      ++....+...    .........++|+|||++++++...  ++.+.+||+.+++....+..+....    +.        
T Consensus       106 ~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~--~~~v~~~d~~~~~~~~~~~~~~~~~----~~--------  171 (368)
T d1mdah_         106 FLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFG--SSAAAGLSVPGASDDQLTKSASCFH----IH--------  171 (368)
T ss_dssp             CCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECS--SSCEEEEEETTTEEEEEEECSSCCC----CE--------
T ss_pred             CcEeeeecCCccceecccCCccceEECCCCCEEEEEeCC--CCeEEEEECCCCcEeEEeeccCcce----Ec--------
Confidence            6543322110    0011234568999999999887653  8999999999998776654431100    00        


Q ss_pred             eEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEE
Q psy14511        143 HLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYT  222 (488)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i  222 (488)
                                                                                    ......+++.+.||.+.+
T Consensus       172 --------------------------------------------------------------~~~~~~~v~~~~Dg~~~~  189 (368)
T d1mdah_         172 --------------------------------------------------------------PGAAATHYLGSCPASLAA  189 (368)
T ss_dssp             --------------------------------------------------------------EEETTEEECCCCTTSCEE
T ss_pred             --------------------------------------------------------------cCCCceEEEEcCCCCEEE
Confidence                                                                          001123444456677777


Q ss_pred             EECCCCceEEEEecC---CCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEecCCEEEE
Q psy14511        223 WNTKTNKTQLLVEYP---TYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSC  299 (488)
Q Consensus       223 w~~~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~  299 (488)
                      +++............   ..+...+..+.+.+++..+..   ..+.+.+++....                         
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~---~~~~v~~~~~~~~-------------------------  241 (368)
T d1mdah_         190 SDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWA---VASSILQGDIPAA-------------------------  241 (368)
T ss_dssp             EECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEEC---BSSCCEEEECCSS-------------------------
T ss_pred             EEecCCceeeeeeecccccccccceeecccccCcEEEEe---cCCCEEEEeecCC-------------------------
Confidence            666544322221110   012333445555555533332   2344444443322                         


Q ss_pred             eecCCeEEEEECcCCCccc---eeeecCCccEEEEEEccCCcEEEEEe-c---------CeEEEEECCCCCCCccccee-
Q psy14511        300 GTIGGNILHYDVRTHSDYP---TAITREGDVVCGLKWSPNGRYLASGS-N---------NTVKIWDFRQLDAKRPLGLI-  365 (488)
Q Consensus       300 ~~~dg~i~i~d~~~~~~~~---~~~~~~~~~i~~~~~s~~~~~l~~~~-d---------~~i~iwd~~~~~~~~~~~~~-  365 (488)
                           .+.+++........   .....  .....++++|++..++... +         ..+.+||..+++....+... 
T Consensus       242 -----~~~~~~~~~~~~~~~~~~~~~~--~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~  314 (368)
T d1mdah_         242 -----GATMKAAIDGNESGRKADNFRS--AGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH  314 (368)
T ss_dssp             -----CCEEECCCCSSCTHHHHTTEEE--CSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE
T ss_pred             -----ceEEEeecccccceeeeeeecC--CCceeEEEcCCCCEEEEEecCCCceeecCCceEEEEECCCCcEeEEecCCC
Confidence                 12222222111100   00111  1122477889888776653 1         35899999988655444322 


Q ss_pred             -e--eeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeecc
Q psy14511        366 -V--PKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQ  405 (488)
Q Consensus       366 -~--~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~  405 (488)
                       .  .+|+|||+.++.+++..++.|++||..+++.+.++....
T Consensus       315 ~~~~~a~spDG~~~ly~s~~~~~~v~v~D~~tgk~~~~i~~g~  357 (368)
T d1mdah_         315 DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDK  357 (368)
T ss_dssp             EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCS
T ss_pred             ceeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEEECCC
Confidence             1  289999985444337789999999999999999887543

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.62  E-value=1.4e-14  Score=134.00  Aligned_cols=108  Identities=21%  Similarity=0.165  Sum_probs=79.0

Q ss_pred             CccCCceEEEee---------cCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEecCCeEEEEeccccCcCC
Q psy14511          1 MCWNGNLLSCGT---------IGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKR   71 (488)
Q Consensus         1 ~~~dg~~la~g~---------~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~   71 (488)
                      ++.||++||.++         .++.+.|||+.+++.  ..+..|.+.+..+.|||||++||...++.+.+|+..+++..+
T Consensus        69 ~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~~--~~l~~~~~~~~~~~~SPDG~~ia~~~~~~l~~~~~~~g~~~~  146 (470)
T d2bgra1          69 ISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQL--ITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYR  146 (470)
T ss_dssp             ECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE--CCSSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEE
T ss_pred             ECCCCCEEEEEECCcceeeeccCceEEEEECCCCcc--cccccCCccccccccccCcceeeEeecccceEEECCCCceee
Confidence            356999999874         357889999998873  457788899999999999999999889999999998765433


Q ss_pred             Ccccc------c---------ccccceeEEEEecCCCeEEeeeCCcccceEEEEec
Q psy14511         72 PQVNN------Q---------CHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNS  112 (488)
Q Consensus        72 ~~~~~------~---------~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~  112 (488)
                      .....      .         .+.+....+.|+|||++|+.....  +..+..|.+
T Consensus       147 ~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~d--~~~v~~~~~  200 (470)
T d2bgra1         147 ITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFN--DTEVPLIEY  200 (470)
T ss_dssp             CCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEE--CTTCCEEEE
T ss_pred             eeeccCCCcccccccceeeeeeecCCccccEECCCCCccceeEec--CCcCceEEE
Confidence            22110      0         022345668899999998887652  333555543

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=99.60  E-value=8.1e-16  Score=135.96  Aligned_cols=243  Identities=9%  Similarity=0.007  Sum_probs=151.3

Q ss_pred             CCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCc------------------EEEEECCcceee
Q psy14511        216 LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEY------------------IDLWHEQEERLI  277 (488)
Q Consensus       216 ~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~------------------i~i~d~~~~~~~  277 (488)
                      .+++|.++|+.+.+...++..+  ....+..++|+|+++.+++.+..+..                  +..+|..+.+..
T Consensus        92 ~~~rVavIDl~t~k~~~ii~iP--~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~v~  169 (441)
T d1qnia2          92 ANTRVARIRLDIMKTDKITHIP--NVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVA  169 (441)
T ss_dssp             TTTEEEEEETTTTEEEEEEECT--TCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTCSEE
T ss_pred             CCCEEEEEECCCCcEeeEEecC--CCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCccceee
Confidence            5566667777776666666554  45678889999988854443222222                  244666666555


Q ss_pred             eeeccccccEEEEEe--cCCEEEEeecCC-eEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECC
Q psy14511        278 QKLRTHMHQVIAMCW--NGNLLSCGTIGG-NILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFR  354 (488)
Q Consensus       278 ~~~~~~~~~v~~~~~--~~~~l~~~~~dg-~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~  354 (488)
                      .++.... ....+.+  +|+++++.+.+. .+..++..+.. ....+...+ ....++++|+|+++..++++.+.+++..
T Consensus       170 ~qI~v~~-~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~-~~d~i~v~n-~p~~~~~~~dGk~~~v~~~~v~vvd~~~  246 (441)
T d1qnia2         170 WQVIVDG-NLDNTDADYTGKYATSTCYNSERAVDLAGTMRN-DRDWVVVFN-VERIAAAVKAGNFKTIGDSKVPVVDGRG  246 (441)
T ss_dssp             EEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCS-SBCEEEEEE-HHHHHHHHHTTCCBCCTTCCCCEEECSS
T ss_pred             EEEecCC-CccceEECCCCCEEEEEecCCCceEEEeccCcc-eEEEEEeCC-ccceEEEecCCCEEEeCCCCcEEEEccc
Confidence            5554322 2344444  788877776553 23333333221 111111111 1123456789998887777888888776


Q ss_pred             CCCCCccccee----eeeecCCCCEEEEEccCCCCeEEEEeCCCccee--------EEEeecc---ccEEEEEEcCCCCE
Q psy14511        355 QLDAKRPLGLI----VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLI--------EELKIHQ---ERILSAVLSPDQTC  419 (488)
Q Consensus       355 ~~~~~~~~~~~----~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~--------~~~~~~~---~~v~~~~~s~~~~~  419 (488)
                      ..+....+...    -..++|||++++++ |..++++.+||+++.+..        ..+.++.   -.....+|.++|..
T Consensus       247 ~~~v~~~IPvgksPhGv~vSPDGkyl~~~-~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~~~~glgplh~~fd~~g~~  325 (441)
T d1qnia2         247 ESEFTRYIPVPKNPHGLNTSPDGKYFIAN-GKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDGRGNA  325 (441)
T ss_dssp             SCSSEEEECCBSSCCCEEECTTSCEEEEE-CTTSSBEEEEEGGGHHHHTTTSSCGGGGEEECCBCCSCEEEEEECSSSEE
T ss_pred             CCceEEEEeCCCCccCceECCCCCEEEEe-CCcCCcEEEEEeehhhhHhhccCCcceEEEeecccccCcccceecCCceE
Confidence            55433333222    12999999999887 889999999998763211        1111121   12455789999999


Q ss_pred             EEEEeCCCcEEEEecCCC------C---cc-------ccccccCCcceEEeecCCCceEEE
Q psy14511        420 VAAASADETISIWNCFPR------D---KK-------RKARQVGSGSSLEFAILKQPVSLT  464 (488)
Q Consensus       420 l~t~~~dg~v~iw~~~~~------~---~~-------~~~~~~~~v~~~~~s~~~~~~~~~  464 (488)
                      +.+...|..|..|++...      +   ..       ...+|...+.+..|+|||+.+...
T Consensus       326 yts~~~ds~v~kw~~~~~~~~~~~~~~~~v~~~~~v~y~~GH~~~~~~~t~~pdGk~l~s~  386 (441)
T d1qnia2         326 YTTLFIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDADGKWLVVL  386 (441)
T ss_dssp             EEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCCCEEEEE
T ss_pred             EEcccccceEEEeccchhhhhhccCCCceeEeccccccCCCCCccccccccCCCCcEEEec
Confidence            999999999999998521      1   11       126788889999999999998665

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=99.39  E-value=1.1e-09  Score=96.45  Aligned_cols=153  Identities=12%  Similarity=0.118  Sum_probs=97.6

Q ss_pred             CCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceee---eee--ccccccEEEEEe--cCCEEEE-eecCCeEEEEECc
Q psy14511        241 NAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLI---QKL--RTHMHQVIAMCW--NGNLLSC-GTIGGNILHYDVR  312 (488)
Q Consensus       241 ~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~---~~~--~~~~~~v~~~~~--~~~~l~~-~~~dg~i~i~d~~  312 (488)
                      ...+.++.|+|+|++++++......|.+|+......+   ...  .........+.|  +++++++ ...++.|.+|++.
T Consensus       144 ~~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~  223 (365)
T d1jofa_         144 NTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVID  223 (365)
T ss_dssp             TCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred             CCcceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeeccceeecCCCCceEEEEECCCCceEEEeccCCCEEEEEEec
Confidence            3457899999999999988555668888876542211   111  123456677888  6776654 4567899999987


Q ss_pred             CCCccceee------------------ecCCccEEEEEEccCCcEEEEEe--c-----CeEEEEECCCCCCCccccee--
Q psy14511        313 THSDYPTAI------------------TREGDVVCGLKWSPNGRYLASGS--N-----NTVKIWDFRQLDAKRPLGLI--  365 (488)
Q Consensus       313 ~~~~~~~~~------------------~~~~~~i~~~~~s~~~~~l~~~~--d-----~~i~iwd~~~~~~~~~~~~~--  365 (488)
                      .........                  ..+......+.++|||++|+++.  +     ..|..|++............  
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~  303 (365)
T d1jofa_         224 PATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSP  303 (365)
T ss_dssp             TTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEE
T ss_pred             CCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecCCCceeeEeEeeE
Confidence            643211110                  01122356789999999998875  2     23777777654222111111  


Q ss_pred             -------e--eeecC-CCCEEEEEccCCCCeEEEEeCCC
Q psy14511        366 -------V--PKLKR-EGRELVTSHGKQDCSLKMWEYPR  394 (488)
Q Consensus       366 -------~--~~~~~-~~~~l~~~~g~~~~~i~i~d~~~  394 (488)
                             .  -+++| +|++|+++ +..++.|.+|++..
T Consensus       304 ~~~~G~~p~~i~~~p~~G~~l~va-~~~s~~v~v~~~~~  341 (365)
T d1jofa_         304 TPTSGGHSNAVSPCPWSDEWMAIT-DDQEGWLEIYRWKD  341 (365)
T ss_dssp             CSSCCTTCCCEEECTTCTTEEEEE-CSSSCEEEEEEEET
T ss_pred             EEcCCCCccEEEecCCCCCEEEEE-eCCCCeEEEEEEeC
Confidence                   1  16777 79988886 67889999998754

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.39  E-value=3.1e-10  Score=95.78  Aligned_cols=230  Identities=13%  Similarity=0.088  Sum_probs=146.9

Q ss_pred             eEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCC--cEEEEECCcceeeeeeccccccEEEEEe--cC
Q psy14511        219 SVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTE--YIDLWHEQEERLIQKLRTHMHQVIAMCW--NG  294 (488)
Q Consensus       219 ~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~--~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~  294 (488)
                      .|++.|........+..    ....+...+|||||+.|+......+  .+.+.+...+.. ..+..+........|  ++
T Consensus        20 ~l~i~d~dG~~~~~l~~----~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~spdg   94 (269)
T d2hqsa1          20 ELRVSDYDGYNQFVVHR----SPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV-RQVASFPRHNGAPAFSPDG   94 (269)
T ss_dssp             EEEEEETTSCSCEEEEE----ESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EEEECCSSCEEEEEECTTS
T ss_pred             EEEEEcCCCCCcEEEec----CCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCce-eEEeeeecccccceecCCC
Confidence            58888888777666665    4456889999999999998744444  355556655443 334445566666666  67


Q ss_pred             CEEEEeec-CCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe--c--CeEEEEECCCCCCCcccce----e
Q psy14511        295 NLLSCGTI-GGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--N--NTVKIWDFRQLDAKRPLGL----I  365 (488)
Q Consensus       295 ~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--d--~~i~iwd~~~~~~~~~~~~----~  365 (488)
                      +.++.... ++...++.......................+++++..+...+  +  ..|.+.++...........    .
T Consensus        95 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~~~~  174 (269)
T d2hqsa1          95 SKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQ  174 (269)
T ss_dssp             SEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEE
T ss_pred             CeeeEeeecCCccceeecccccccceeeeeccccccccccccccccceecccccCCceEeeeecccccceeeeccccccc
Confidence            77766543 333333333322223333334444455667888887766655  2  3566667665543222221    1


Q ss_pred             eeeecCCCCEEEEEccCCCCe--EEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCC---CcEEEEecCCCCcc
Q psy14511        366 VPKLKREGRELVTSHGKQDCS--LKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASAD---ETISIWNCFPRDKK  440 (488)
Q Consensus       366 ~~~~~~~~~~l~~~~g~~~~~--i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~d---g~v~iw~~~~~~~~  440 (488)
                      ...++|+++.++... ...+.  +.+.+...+..  .+..+........|||||+.|+..+..   ..|+++++..+...
T Consensus       175 ~~~~spdg~~~~~~~-~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~dg~~~~  251 (269)
T d2hqsa1         175 DADVSSDGKFMVMVS-SNGGQQHIAKQDLATGGV--QVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKA  251 (269)
T ss_dssp             EEEECTTSSEEEEEE-ECSSCEEEEEEETTTCCE--EECCCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEE
T ss_pred             ccccccccceeEEEe-ecCCceeeeEeecccccc--eEeecCccccceEECCCCCEEEEEEcCCCCcEEEEEECCCCCEE
Confidence            238999999998863 33444  44445544433  333455667788999999999866543   47899999988887


Q ss_pred             ccccccCCcceEEeec
Q psy14511        441 RKARQVGSGSSLEFAI  456 (488)
Q Consensus       441 ~~~~~~~~v~~~~~s~  456 (488)
                      .+....+.+...+|||
T Consensus       252 ~lt~~~g~~~~p~WSP  267 (269)
T d2hqsa1         252 RLPATDGQVKFPAWSP  267 (269)
T ss_dssp             ECCCSSSEEEEEEECC
T ss_pred             EEeCCCCcEEeEEeCC
Confidence            7777778888899999

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=5.6e-09  Score=94.70  Aligned_cols=342  Identities=10%  Similarity=0.067  Sum_probs=184.7

Q ss_pred             EEEccCCcEEEEecCCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCC------cccceEEEEecCCC
Q psy14511         42 LKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGG------ICDQTVRLWNSMNG  115 (488)
Q Consensus        42 l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~------~~d~~i~vwd~~~~  115 (488)
                      ..|.+++.++....++.|.+||+.+++....+....-..-.+....||||+++++.....      +..+.+.++|+.++
T Consensus        22 ~~W~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~  101 (465)
T d1xfda1          22 AKWISDTEFIYREQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHG  101 (465)
T ss_dssp             CCBSSSSCBCCCCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSC
T ss_pred             CEEeCCCcEEEEeCCCcEEEEECCCCCEEEEEcCccccccccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCC
Confidence            468899988876668999999999865432222111123467788999999998775421      12567888898877


Q ss_pred             eeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCc
Q psy14511        116 KEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSI  195 (488)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (488)
                      ..............                                                                  
T Consensus       102 ~~~~l~~~~~~~~~------------------------------------------------------------------  115 (465)
T d1xfda1         102 DPQSLDPPEVSNAK------------------------------------------------------------------  115 (465)
T ss_dssp             CCEECCCTTCCSCC------------------------------------------------------------------
T ss_pred             ceeeccCccCCccc------------------------------------------------------------------
Confidence            64322111111000                                                                  


Q ss_pred             cccceeeeeeeCC-CcEEEEECCCeEEEEECCCCceEEEEecCCC---------------CCCceEEEEEcCCCCeEEEE
Q psy14511        196 INDFYTSGLDWGY-HDTLAVALDTSVYTWNTKTNKTQLLVEYPTY---------------DNAYISCVAWKPRTTDLAVT  259 (488)
Q Consensus       196 ~~~~~~~~~~~~~-~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~---------------~~~~i~~~~~~~~~~~l~~~  259 (488)
                           +....|++ ++.++-..++.|++.+..++...++..-...               ....-..+.|||||++|+..
T Consensus       116 -----l~~~~wSPDG~~iafv~~~nl~~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~  190 (465)
T d1xfda1         116 -----LQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYA  190 (465)
T ss_dssp             -----CSBCCBCSSTTCEEEEETTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEE
T ss_pred             -----cceeeeccCCceEEEEecceEEEEecCCCceEEEecccCcceeeccccchhhhhhhccccceEEECCCCCeEEEE
Confidence                 00112222 3344445577788887777665554432110               00112577899999999998


Q ss_pred             eCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceee-----ecCCccEEEEE
Q psy14511        260 NTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAI-----TREGDVVCGLK  332 (488)
Q Consensus       260 ~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-----~~~~~~i~~~~  332 (488)
                      -..+..+..+.+....     ......+..+.+  -|..    .....+.++|+..+.......     .....-+..+.
T Consensus       191 ~~D~s~V~~~~~~~~~-----~~~~p~~~~~~Yp~~G~~----np~~~l~v~d~~~~~~~~~~~~~~~~~~~~~y~~~~~  261 (465)
T d1xfda1         191 AINDSRVPIMELPTYT-----GSIYPTVKPYHYPKAGSE----NPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVK  261 (465)
T ss_dssp             EEECTTSCEEEECCCS-----SSSSCCCEEEECCBTTSC----CCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEE
T ss_pred             Eecccccceeeccccc-----ccccceeeeeeccccCCC----CCceeEEEEecCCCcEEEEEeccCcCccccceeeeeE
Confidence            3344555555432210     001111222222  1110    011247788887653222111     12233477899


Q ss_pred             EccCCcEEEEEec-----CeEEEEECCCCCCCcccce----------eeeeecCCCCEEEEEc-cCCC--CeEEEEeCC-
Q psy14511        333 WSPNGRYLASGSN-----NTVKIWDFRQLDAKRPLGL----------IVPKLKREGRELVTSH-GKQD--CSLKMWEYP-  393 (488)
Q Consensus       333 ~s~~~~~l~~~~d-----~~i~iwd~~~~~~~~~~~~----------~~~~~~~~~~~l~~~~-g~~~--~~i~i~d~~-  393 (488)
                      |+|++++++...+     ..+.++|..+++.......          ....|+++|+.++... ...+  +.++..++. 
T Consensus       262 W~~d~~~~~~~~nR~q~~~~i~~~d~~tg~~~~~~~e~~~~wv~~~~~~p~~~~dg~~~~fi~~se~~g~~~ly~~~~~~  341 (465)
T d1xfda1         262 WATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSS  341 (465)
T ss_dssp             ESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEEC
T ss_pred             EcCCCeEEEEEEccccccceEEEEcCCCCcEEEEEEEcCCceEeccCCceeEccCCCeeEEEEeeeecccCceEEEEecc
Confidence            9999987776542     4688889888765433221          1238899998654321 1222  234433321 


Q ss_pred             -----CcceeEEEeeccccEEEE-EEcCCCCEEE-EEeCCC--cEEEEe--cCCCCccc----cccccCCcceEEeecCC
Q psy14511        394 -----RLHLIEELKIHQERILSA-VLSPDQTCVA-AASADE--TISIWN--CFPRDKKR----KARQVGSGSSLEFAILK  458 (488)
Q Consensus       394 -----~~~~~~~~~~~~~~v~~~-~~s~~~~~l~-t~~~dg--~v~iw~--~~~~~~~~----~~~~~~~v~~~~~s~~~  458 (488)
                           .++.+..+....-.|..+ .|.++++.+. ++..++  .-.+|.  +.......    .........++.|||++
T Consensus       342 ~~~~~~~~~~~~LT~G~w~V~~i~~~d~~~~~vyF~a~~~~p~~~hly~v~l~g~~~~~~lt~~~~~~~~~~~~~~S~~~  421 (465)
T d1xfda1         342 SQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSM  421 (465)
T ss_dssp             SSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTS
T ss_pred             ccccCCCceeEEeccCCceEEEEEEEcCCCCEEEEEEeCCCCCceEEEEEECCCCCcceeeccccCCCCCEEEEEECCCC
Confidence                 233334444334456654 6888887664 444332  333444  44333222    12344567899999999


Q ss_pred             CceEE
Q psy14511        459 QPVSL  463 (488)
Q Consensus       459 ~~~~~  463 (488)
                      +.+..
T Consensus       422 ~y~v~  426 (465)
T d1xfda1         422 DFFLL  426 (465)
T ss_dssp             SEEEE
T ss_pred             CEEEE
Confidence            99864

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.32  E-value=2.6e-09  Score=89.94  Aligned_cols=79  Identities=16%  Similarity=0.137  Sum_probs=56.4

Q ss_pred             eEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec----CCeEEEEeccccCcCCCcccccccccceeEEEEecC
Q psy14511         16 NILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS----NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPW   91 (488)
Q Consensus        16 ~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~----d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~   91 (488)
                      .|.|.|..... . ..+..+...+...+|||||+.||...    ...+.+.+..++...    .+..+.+......|+|+
T Consensus        20 ~l~i~d~dG~~-~-~~l~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~spd   93 (269)
T d2hqsa1          20 ELRVSDYDGYN-Q-FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR----QVASFPRHNGAPAFSPD   93 (269)
T ss_dssp             EEEEEETTSCS-C-EEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE----EEECCSSCEEEEEECTT
T ss_pred             EEEEEcCCCCC-c-EEEecCCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCcee----EEeeeecccccceecCC
Confidence            57788876544 3 44556677789999999999999875    345666666653322    23446678889999999


Q ss_pred             CCeEEeeeC
Q psy14511         92 EPTLLATGG  100 (488)
Q Consensus        92 ~~~l~~~~~  100 (488)
                      |+.++....
T Consensus        94 g~~i~~~~~  102 (269)
T d2hqsa1          94 GSKLAFALS  102 (269)
T ss_dssp             SSEEEEEEC
T ss_pred             CCeeeEeee
Confidence            998887665

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=99.20  E-value=6.2e-09  Score=91.47  Aligned_cols=252  Identities=10%  Similarity=0.013  Sum_probs=140.4

Q ss_pred             cEEEEE--CCCeEEEE--ECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecc--c
Q psy14511        210 DTLAVA--LDTSVYTW--NTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRT--H  283 (488)
Q Consensus       210 ~~~~~~--~d~~v~iw--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~--~  283 (488)
                      .+++++  ..+.|+.+  |.++++........-.....+..++++|+++.|+++ . .+.+..|.+.....+.....  .
T Consensus         4 ~l~vGtyt~~~~i~~~~fd~~~~~l~~~~~~~~~~~~~~s~la~s~d~~~ly~~-~-~~~~~~~~i~~~~~~~~~~~~~~   81 (365)
T d1jofa_           4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGA-A-MKKWSSFAVKSPTEIVHEASHPI   81 (365)
T ss_dssp             EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEE-E-BTEEEEEEEEETTEEEEEEEEEC
T ss_pred             EEEEEeecCCCCEEEEEEcCCCCeEEEeeeeeccCCCCCCEEEEcCCCCEEEEE-e-CCcEEEEEEeCCCCeEEEeeecC
Confidence            467776  35567654  555555433222211144556779999999999887 3 45677776654221211111  1


Q ss_pred             cccEEEEEe--cCCE--EEEee-cCCeEEEEECcC------------CCccc----eeeecCCccEEEEEEccCCcEEEE
Q psy14511        284 MHQVIAMCW--NGNL--LSCGT-IGGNILHYDVRT------------HSDYP----TAITREGDVVCGLKWSPNGRYLAS  342 (488)
Q Consensus       284 ~~~v~~~~~--~~~~--l~~~~-~dg~i~i~d~~~------------~~~~~----~~~~~~~~~i~~~~~s~~~~~l~~  342 (488)
                      ......+.+  +++.  ++++. ..+.+..+.+..            .....    .........+.++.|+|||+++++
T Consensus        82 ~~~p~~v~~~~~~~~~~v~~a~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~v  161 (365)
T d1jofa_          82 GGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYS  161 (365)
T ss_dssp             CSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEE
T ss_pred             CCCcEEEEECCCCCEEEEEEecCCCCEEEEeEccCCCCcceeEeeeecceecCcccCcccCCCCcceEEEECCCCCEEEE
Confidence            111112222  3442  22221 234444433321            11100    011112234789999999999998


Q ss_pred             Eec--CeEEEEECCCCCCCccccee----------eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeE--EEee-----
Q psy14511        343 GSN--NTVKIWDFRQLDAKRPLGLI----------VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIE--ELKI-----  403 (488)
Q Consensus       343 ~~d--~~i~iwd~~~~~~~~~~~~~----------~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~--~~~~-----  403 (488)
                      ++.  ..|.+|+.............          ...|+|++++++++ ...+++|.+|++...+...  ....     
T Consensus       162 ~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~-~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~  240 (365)
T d1jofa_         162 ADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYAL-MEAGNRICEYVIDPATHMPVYTHHSFPLIP  240 (365)
T ss_dssp             EETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEE-ETTTTEEEEEEECTTTCCEEEEEEEEESSC
T ss_pred             eeCCCCEEEEEEccCCCceeeccceeecCCCCceEEEEECCCCceEEEe-ccCCCEEEEEEecCCCceEEEEeeeecccc
Confidence            873  78999986643222211111          12899999998876 6788999999987654322  2111     


Q ss_pred             ------------ccccEEEEEEcCCCCEEEEEeC-C-----CcEEEEecCCCCccc-c------ccccCCcceEEeec-C
Q psy14511        404 ------------HQERILSAVLSPDQTCVAAASA-D-----ETISIWNCFPRDKKR-K------ARQVGSGSSLEFAI-L  457 (488)
Q Consensus       404 ------------~~~~v~~~~~s~~~~~l~t~~~-d-----g~v~iw~~~~~~~~~-~------~~~~~~v~~~~~s~-~  457 (488)
                                  +......+.++|||++|+++.. +     +.|..|++....... .      .........++++| +
T Consensus       241 ~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~~  320 (365)
T d1jofa_         241 PGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWS  320 (365)
T ss_dssp             TTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTC
T ss_pred             ccccccccccccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecCCCceeeEeEeeEEEcCCCCccEEEecCCC
Confidence                        1123568899999999987642 2     337778776533221 1      12334567799998 7


Q ss_pred             CCceEEE
Q psy14511        458 KQPVSLT  464 (488)
Q Consensus       458 ~~~~~~~  464 (488)
                      |+.+...
T Consensus       321 G~~l~va  327 (365)
T d1jofa_         321 DEWMAIT  327 (365)
T ss_dssp             TTEEEEE
T ss_pred             CCEEEEE
Confidence            7766443

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=99.16  E-value=5.9e-09  Score=89.16  Aligned_cols=230  Identities=11%  Similarity=0.029  Sum_probs=136.2

Q ss_pred             ccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccc
Q psy14511          2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHL   80 (488)
Q Consensus         2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~   80 (488)
                      ..||+++++...+++|..||.....   ..+......+.+++|+|||+++++.. ++.+.+|+.................
T Consensus        36 ~pdG~l~vt~~~~~~I~~i~p~g~~---~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (302)
T d2p4oa1          36 APDGTIFVTNHEVGEIVSITPDGNQ---QIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDA  112 (302)
T ss_dssp             CTTSCEEEEETTTTEEEEECTTCCE---EEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTC
T ss_pred             CCCCCEEEEeCCCCEEEEEeCCCCE---EEEEcCCCCcceEEEcCCCCeEEEecCCceEEEEEecccccceeeccccCCc
Confidence            3489999999899999888865432   33455667899999999999888876 7788888775432211111111234


Q ss_pred             cceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceec
Q psy14511         81 SAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLN  160 (488)
Q Consensus        81 ~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (488)
                      .....+.+.++++.+++...   ++.+..++...+...............                              
T Consensus       113 ~~~n~i~~~~~g~~~v~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~------------------------------  159 (302)
T d2p4oa1         113 IFLNGITPLSDTQYLTADSY---RGAIWLIDVVQPSGSIWLEHPMLARSN------------------------------  159 (302)
T ss_dssp             SCEEEEEESSSSEEEEEETT---TTEEEEEETTTTEEEEEEECGGGSCSS------------------------------
T ss_pred             cccceeEEccCCCEEeeccc---cccceeeeccCCcceeEecCCccceee------------------------------
Confidence            56789999999965554444   788888887766532222111000000                              


Q ss_pred             cccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEE-ECCCeEEEEECCCCceEEEEecCCC
Q psy14511        161 QSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAV-ALDTSVYTWNTKTNKTQLLVEYPTY  239 (488)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~v~iw~~~~~~~~~~~~~~~~  239 (488)
                                                       ..........+.++++.++.+ +..+.|+.++.............. 
T Consensus       160 ---------------------------------~~~~~~~~ngi~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~-  205 (302)
T d2p4oa1         160 ---------------------------------SESVFPAANGLKRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFV-  205 (302)
T ss_dssp             ---------------------------------TTCCSCSEEEEEEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEE-
T ss_pred             ---------------------------------ccCcccccccccccCCceeeecCCCCeEEecccccccccccccccc-
Confidence                                             000001122233444444444 478888888876543221111100 


Q ss_pred             CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcce-eeeeeccccccEEEEEe-----cCCEEEEeec
Q psy14511        240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEER-LIQKLRTHMHQVIAMCW-----NGNLLSCGTI  302 (488)
Q Consensus       240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~-~~~~~~~~~~~v~~~~~-----~~~~l~~~~~  302 (488)
                      .......+++.++|+..++. ..++.|..++..... .+......-...++++|     |++.|+.++.
T Consensus       206 ~~~~pdgia~d~dG~l~va~-~~~~~V~~i~p~G~~~~~~~~~~~~~~pt~vafg~~~~D~~~Lyvtt~  273 (302)
T d2p4oa1         206 EQTNIDDFAFDVEGNLYGAT-HIYNSVVRIAPDRSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTN  273 (302)
T ss_dssp             ESCCCSSEEEBTTCCEEEEC-BTTCCEEEECTTCCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred             CCCCCcceEECCCCCEEEEE-cCCCcEEEECCCCCEEEEEecCCCCCCceEEEEcCCCCCCCEEEEECC
Confidence            22345679999999866666 778899999876432 23333334456788888     3455655543

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.15  E-value=2e-07  Score=78.27  Aligned_cols=154  Identities=14%  Similarity=0.173  Sum_probs=97.9

Q ss_pred             CCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeee--ccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCc
Q psy14511        241 NAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKL--RTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSD  316 (488)
Q Consensus       241 ~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~--~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~  316 (488)
                      ......+++.++++.+++. ...+.+.+++... +.+..+  ..+......+++  +++.+++....+.|++||...  .
T Consensus       113 ~~~p~~~avd~~G~i~v~~-~~~~~~~~~~~~g-~~~~~~g~~~~~~~~~~i~~d~~g~i~v~d~~~~~V~~~d~~G--~  188 (279)
T d1q7fa_         113 LQHPRGVTVDNKGRIIVVE-CKVMRVIIFDQNG-NVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEG--Q  188 (279)
T ss_dssp             CSCEEEEEECTTSCEEEEE-TTTTEEEEECTTS-CEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTC--C
T ss_pred             ccccceeccccCCcEEEEe-eccceeeEeccCC-ceeecccccccccccceeeeccceeEEeeeccccceeeeecCC--c
Confidence            3456678888888777766 6677777777543 444443  234455667777  467777778888999998764  2


Q ss_pred             cceee--ecCCccEEEEEEccCCcEEEEEe-c-CeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeC
Q psy14511        317 YPTAI--TREGDVVCGLKWSPNGRYLASGS-N-NTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEY  392 (488)
Q Consensus       317 ~~~~~--~~~~~~i~~~~~s~~~~~l~~~~-d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~  392 (488)
                      ....+  .+.......++++|+|+++++-. + ..|.+|+.                                       
T Consensus       189 ~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~---------------------------------------  229 (279)
T d1q7fa_         189 YLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ---------------------------------------  229 (279)
T ss_dssp             EEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT---------------------------------------
T ss_pred             eeeeecccccccCCcccccccCCeEEEEECCCCcEEEEECC---------------------------------------
Confidence            33333  22334467888888888666543 2 34555542                                       


Q ss_pred             CCcceeEEEeec--cccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCc
Q psy14511        393 PRLHLIEELKIH--QERILSAVLSPDQTCVAAASADETISIWNCFPRDK  439 (488)
Q Consensus       393 ~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~  439 (488)
                       +|+.+.++...  ......+++.|||.+++ ++.+..|++|......+
T Consensus       230 -~G~~~~~~~~~~~~~~p~~vav~~dG~l~V-~~~n~~v~~fr~~~~~~  276 (279)
T d1q7fa_         230 -DGQLISALESKVKHAQCFDVALMDDGSVVL-ASKDYRLYIYRYVQLAP  276 (279)
T ss_dssp             -TSCEEEEEEESSCCSCEEEEEEETTTEEEE-EETTTEEEEEECSCCCC
T ss_pred             -CCCEEEEEeCCCCCCCEeEEEEeCCCcEEE-EeCCCeEEEEEeeeecC
Confidence             23333333221  23467899999997655 55789999999987654

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=1.8e-07  Score=84.64  Aligned_cols=364  Identities=12%  Similarity=0.101  Sum_probs=182.8

Q ss_pred             CCceEEEeecCCeEEEEEcccCcccceeecc---cCceEEEEEEccCCcEEEEec----------CCeEEEEeccccCcC
Q psy14511          4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITR---EGDVVCGLKWSPNGRYLASGS----------NNTVKIWDFRQLDAK   70 (488)
Q Consensus         4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~---h~~~V~~l~~sp~g~~las~~----------d~~i~vwd~~~~~~~   70 (488)
                      |+.++. -..+|.|.+||+.+++.. ..+..   ..-.+....|||||++|+...          .+.+.++|+.++...
T Consensus        27 ~~~~~~-~~~~g~i~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~  104 (465)
T d1xfda1          27 DTEFIY-REQKGTVRLWNVETNTST-VLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQ  104 (465)
T ss_dssp             SSCBCC-CCSSSCEEEBCGGGCCCE-EEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCE
T ss_pred             CCcEEE-EeCCCcEEEEECCCCCEE-EEEcCccccccccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCCcee
Confidence            455544 356889999999988742 22322   223567788999999988764          368899999876532


Q ss_pred             CCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCcc-cccccc--cccc--ccceeEE
Q psy14511         71 RPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQA-NDETIS--YREQ--KKRRHLS  145 (488)
Q Consensus        71 ~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~-~~~~~~--~~~~--~~~~~~~  145 (488)
                       .+.........+....|||||+.++.+.    ++.|.+.+..++...+......... ..-...  ....  .....+-
T Consensus       105 -~l~~~~~~~~~l~~~~wSPDG~~iafv~----~~nl~~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~  179 (465)
T d1xfda1         105 -SLDPPEVSNAKLQYAGWGPKGQQLIFIF----ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHW  179 (465)
T ss_dssp             -ECCCTTCCSCCCSBCCBCSSTTCEEEEE----TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEE
T ss_pred             -eccCccCCccccceeeeccCCceEEEEe----cceEEEEecCCCceEEEecccCcceeeccccchhhhhhhccccceEE
Confidence             3322333345667789999999987766    7789999887776655443322110 000000  0000  0000000


Q ss_pred             EEEeeeeccccceecccccc---ccceeeecccccccccccCCC-ceeecCCCccccceeeeeeeCCCcEEEEECCCeEE
Q psy14511        146 FLLHGFEIDRKKVLNQSKRT---VSPTQFLRTLGKLPRKVKAKP-ERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVY  221 (488)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~  221 (488)
                      +      .++++.+++....   +...... .     ......+ ......+....          .+      ....+.
T Consensus       180 W------SPDgk~iaf~~~D~s~V~~~~~~-~-----~~~~~~p~~~~~~Yp~~G~----------~n------p~~~l~  231 (465)
T d1xfda1         180 W------SPDGTRLAYAAINDSRVPIMELP-T-----YTGSIYPTVKPYHYPKAGS----------EN------PSISLH  231 (465)
T ss_dssp             E------CTTSSEEEEEEEECTTSCEEEEC-C-----CSSSSSCCCEEEECCBTTS----------CC------CEEEEE
T ss_pred             E------CCCCCeEEEEEecccccceeecc-c-----ccccccceeeeeeccccCC----------CC------CceeEE
Confidence            1      1222222222100   0000000 0     0000000 00000000000          00      112577


Q ss_pred             EEECCCCceEEEEecCC---CCCCceEEEEEcCCCCeEEEEeCCC---CcEEEEECCcceeeeeeccccc-------cEE
Q psy14511        222 TWNTKTNKTQLLVEYPT---YDNAYISCVAWKPRTTDLAVTNTCT---EYIDLWHEQEERLIQKLRTHMH-------QVI  288 (488)
Q Consensus       222 iw~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~~~---~~i~i~d~~~~~~~~~~~~~~~-------~v~  288 (488)
                      ++|+.++........+.   .....+..+.|+|+++.++.....+   ..+.++|..+++....+.....       ...
T Consensus       232 v~d~~~~~~~~~~~~~~~~~~~~~y~~~~~W~~d~~~~~~~~nR~q~~~~i~~~d~~tg~~~~~~~e~~~~wv~~~~~~p  311 (465)
T d1xfda1         232 VIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEP  311 (465)
T ss_dssp             EEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCC
T ss_pred             EEecCCCcEEEEEeccCcCccccceeeeeEEcCCCeEEEEEEccccccceEEEEcCCCCcEEEEEEEcCCceEeccCCce
Confidence            88887665432221111   0233578899999998666652222   2577889988876555433211       111


Q ss_pred             EEEecCCEEE---EeecC--CeEEEEECcC-----CCccceeeecCCccEEEE-EEccCCcEEEEE-e-c--CeEEEEEC
Q psy14511        289 AMCWNGNLLS---CGTIG--GNILHYDVRT-----HSDYPTAITREGDVVCGL-KWSPNGRYLASG-S-N--NTVKIWDF  353 (488)
Q Consensus       289 ~~~~~~~~l~---~~~~d--g~i~i~d~~~-----~~~~~~~~~~~~~~i~~~-~~s~~~~~l~~~-~-d--~~i~iwd~  353 (488)
                      .+..+|+.++   ....+  +.++.+++..     .......+....-.|..+ +|+++++.+... . +  +.-++|.+
T Consensus       312 ~~~~dg~~~~fi~~se~~g~~~ly~~~~~~~~~~~~~~~~~~LT~G~w~V~~i~~~d~~~~~vyF~a~~~~p~~~hly~v  391 (465)
T d1xfda1         312 VFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSA  391 (465)
T ss_dssp             EECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEE
T ss_pred             eEccCCCeeEEEEeeeecccCceEEEEeccccccCCCceeEEeccCCceEEEEEEEcCCCCEEEEEEeCCCCCceEEEEE
Confidence            2222665332   22222  2344443321     112233444444445554 688888776543 3 2  44455554


Q ss_pred             C--CCCCCcccc--------eeeeeecCCCCEEEEEc-cCCCCeEEEEeCCCcceeEEEe
Q psy14511        354 R--QLDAKRPLG--------LIVPKLKREGRELVTSH-GKQDCSLKMWEYPRLHLIEELK  402 (488)
Q Consensus       354 ~--~~~~~~~~~--------~~~~~~~~~~~~l~~~~-g~~~~~i~i~d~~~~~~~~~~~  402 (488)
                      .  .....+.+.        .+...|||++++++... |..--.+.+++..+++.+..|+
T Consensus       392 ~l~g~~~~~~lt~~~~~~~~~~~~~~S~~~~y~v~~~s~~~~P~~~~~~~~~~~~~~~Le  451 (465)
T d1xfda1         392 NTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPGVPMVTVHNTTDKKKMFDLE  451 (465)
T ss_dssp             CSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECCSSSSCCEEEEETTTCCEEEEEE
T ss_pred             ECCCCCcceeeccccCCCCCEEEEEECCCCCEEEEEeecCCCCeEEEEECCCCCEEEEEc
Confidence            3  332222211        12338999999998642 3333567888888888887775

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=99.09  E-value=3.7e-08  Score=84.09  Aligned_cols=220  Identities=15%  Similarity=0.080  Sum_probs=146.0

Q ss_pred             CCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccc
Q psy14511        241 NAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYP  318 (488)
Q Consensus       241 ~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~  318 (488)
                      ...+..++++|||+.+++. ..+++|..++....  ...+......+.++++  +|+++++...++.+..++........
T Consensus        27 ~~~~e~iAv~pdG~l~vt~-~~~~~I~~i~p~g~--~~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~  103 (302)
T d2p4oa1          27 NTFLENLASAPDGTIFVTN-HEVGEIVSITPDGN--QQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV  103 (302)
T ss_dssp             TCCEEEEEECTTSCEEEEE-TTTTEEEEECTTCC--EEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCE
T ss_pred             CCCcCCEEECCCCCEEEEe-CCCCEEEEEeCCCC--EEEEEcCCCCcceEEEcCCCCeEEEecCCceEEEEEecccccce
Confidence            3468899999999988777 88999988886543  2334445567888888  78988888888888888876543222


Q ss_pred             eee--ecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccc-------------eeeeeecCCCCEEEEEccC
Q psy14511        319 TAI--TREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLG-------------LIVPKLKREGRELVTSHGK  382 (488)
Q Consensus       319 ~~~--~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~-------------~~~~~~~~~~~~l~~~~g~  382 (488)
                      ..+  .......+.+++.++++++++.+ ++.+..+|...........             .....+..++..++.+ ..
T Consensus       104 ~~~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~~~~l~~~-~~  182 (302)
T d2p4oa1         104 ETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVS-NT  182 (302)
T ss_dssp             EEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEE-ET
T ss_pred             eeccccCCccccceeEEccCCCEEeeccccccceeeeccCCcceeEecCCccceeeccCcccccccccccCCceeee-cC
Confidence            222  22345678999999999888776 4888888877553211000             0011344556666665 56


Q ss_pred             CCCeEEEEeCCCcceeE--EEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccc--cccccCCcceEEe---e
Q psy14511        383 QDCSLKMWEYPRLHLIE--ELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKR--KARQVGSGSSLEF---A  455 (488)
Q Consensus       383 ~~~~i~i~d~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~--~~~~~~~v~~~~~---s  455 (488)
                      ..+.|+.++........  ...........+++.+||+++++...++.|..++........  ........++++|   +
T Consensus       183 ~~~~i~~~~~~~~~~~~~~~~~~~~~~pdgia~d~dG~l~va~~~~~~V~~i~p~G~~~~~~~~~~~~~~pt~vafg~~~  262 (302)
T d2p4oa1         183 EKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDRSTTIIAQAEQGVIGSTAVAFGQTE  262 (302)
T ss_dssp             TTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTTCCEEEEECGGGTCTTEEEEEECCST
T ss_pred             CCCeEEeccccccccccccccccCCCCCcceEECCCCCEEEEEcCCCcEEEECCCCCEEEEEecCCCCCCceEEEEcCCC
Confidence            78888888876543221  111223445679999999988888889999998776433221  1223345688999   6


Q ss_pred             cCCCceEEE
Q psy14511        456 ILKQPVSLT  464 (488)
Q Consensus       456 ~~~~~~~~~  464 (488)
                      +|++.+-+.
T Consensus       263 ~D~~~Lyvt  271 (302)
T d2p4oa1         263 GDCTAIYVV  271 (302)
T ss_dssp             TTTTEEEEE
T ss_pred             CCCCEEEEE
Confidence            677766443

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.96  E-value=1.6e-07  Score=77.97  Aligned_cols=216  Identities=7%  Similarity=-0.104  Sum_probs=132.5

Q ss_pred             CceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccce
Q psy14511        242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPT  319 (488)
Q Consensus       242 ~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~  319 (488)
                      .....++++++|+..++.....+.+..++...................+++  +++++++....+.+++++-.+.. ...
T Consensus        14 ~~P~~vavd~dG~i~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~gvav~~~g~i~v~d~~~~~i~~~~~~~~~-~~~   92 (260)
T d1rwia_          14 LSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQ-TVL   92 (260)
T ss_dssp             CCEEEEEECTTCCEEEEECSSSCEEEEEC----CEEECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCC-EEC
T ss_pred             CCCCEEEEcCCCCEEEEEcCCCCEEEEEcCCCceEEEeccCCccCceEEEEcCCCCEEEeeeeeceeeeeeeccce-eee
Confidence            456899999999877765355677777765543222222111222345555  67777776666666665544332 221


Q ss_pred             eeecCCccEEEEEEccCCcEEEEEec-CeEEEEECCCCCCCccc----cee-eeeecCCCCEEEEEccCCCCeEEEEeCC
Q psy14511        320 AITREGDVVCGLKWSPNGRYLASGSN-NTVKIWDFRQLDAKRPL----GLI-VPKLKREGRELVTSHGKQDCSLKMWEYP  393 (488)
Q Consensus       320 ~~~~~~~~i~~~~~s~~~~~l~~~~d-~~i~iwd~~~~~~~~~~----~~~-~~~~~~~~~~l~~~~g~~~~~i~i~d~~  393 (488)
                      .. ........++++++++++++-.. ..+..++..........    ... --++.++++.+++  ...++.|..++..
T Consensus        93 ~~-~~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~~~v~--~~~~~~i~~~d~~  169 (260)
T d1rwia_          93 PF-DGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVT--DTDNNRVVKLEAE  169 (260)
T ss_dssp             CC-CSCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEECCCCSCCSCCEEEECTTCCEEEE--EGGGTEEEEECTT
T ss_pred             ee-eeeeecccccccccceeEeeccccccccccccccceeeeeeecccCCcceeeecCCCCEeee--ccccccccccccc
Confidence            12 22345789999999988776554 77777776554321111    111 1177889987776  5667889999977


Q ss_pred             CcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcccc-ccccCCcceEEeecCCCce
Q psy14511        394 RLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRK-ARQVGSGSSLEFAILKQPV  461 (488)
Q Consensus       394 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~-~~~~~~v~~~~~s~~~~~~  461 (488)
                      ...........-.....+++.++|+++++....+.|..++......... ...-.....+++.++|..+
T Consensus       170 ~~~~~~~~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~~~~~~~~~~~~~P~~i~~d~~g~l~  238 (260)
T d1rwia_         170 SNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVY  238 (260)
T ss_dssp             TCCEEECCCSSCCSEEEEEECTTCCEEEEETTTTEEEEECTTCSCCEECCCCSCCCEEEEEECTTCCEE
T ss_pred             cceeeeeeccccCCCccceeeeeeeeeeeecCCCEEEEEeCCCCeEEEEccCCCCCeEEEEEeCCCCEE
Confidence            5443332223445678999999999888888888888888765543322 2223456789999988644

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.96  E-value=3.3e-07  Score=76.08  Aligned_cols=233  Identities=9%  Similarity=0.036  Sum_probs=135.5

Q ss_pred             CCCccccceeeeeeeCC-CcEEEEE--CCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEE
Q psy14511        192 APSIINDFYTSGLDWGY-HDTLAVA--LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDL  268 (488)
Q Consensus       192 ~~~~~~~~~~~~~~~~~-~~~~~~~--~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i  268 (488)
                      ............+.+++ +.++.+.  ..+.+..++....... .....  .......++++++++..++. ...+.+++
T Consensus         7 ~~~~~~~~~P~~vavd~dG~i~v~~~~~~~~i~~~~~~~~~~~-~~~~~--~~~~p~gvav~~~g~i~v~d-~~~~~i~~   82 (260)
T d1rwia_           7 FTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTT-VLPFN--GLYQPQGLAVDGAGTVYVTD-FNNRVVTL   82 (260)
T ss_dssp             CCSCCSCCCEEEEEECTTCCEEEEECSSSCEEEEEC----CEE-ECCCC--SCCSCCCEEECTTCCEEEEE-TTTEEEEE
T ss_pred             cccCCCcCCCCEEEEcCCCCEEEEEcCCCCEEEEEcCCCceEE-EeccC--CccCceEEEEcCCCCEEEee-eeeceeee
Confidence            33333334444455543 4444443  4456666655443322 22221  23346788999999766655 66777776


Q ss_pred             EECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEec-
Q psy14511        269 WHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN-  345 (488)
Q Consensus       269 ~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d-  345 (488)
                      ++......+..... ......+++  +++++++-..+..+..++........... ........++++|+++++++... 
T Consensus        83 ~~~~~~~~~~~~~~-~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~i~~~~~g~~~v~~~~~  160 (260)
T d1rwia_          83 AAGSNNQTVLPFDG-LNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPF-TGLNDPDGVAVDNSGNVYVTDTDN  160 (260)
T ss_dssp             CTTCSCCEECCCCS-CCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEECCC-CSCCSCCEEEECTTCCEEEEEGGG
T ss_pred             eeeccceeeeeeee-eeecccccccccceeEeeccccccccccccccceeeeeee-cccCCcceeeecCCCCEeeecccc
Confidence            66555444433332 344567777  56777766666777777765532211111 22233568999999998777664 


Q ss_pred             CeEEEEECCCCCCCcc----cceee-eeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEE-eeccccEEEEEEcCCCCE
Q psy14511        346 NTVKIWDFRQLDAKRP----LGLIV-PKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEEL-KIHQERILSAVLSPDQTC  419 (488)
Q Consensus       346 ~~i~iwd~~~~~~~~~----~~~~~-~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~-~~~~~~v~~~~~s~~~~~  419 (488)
                      +.|..+|.........    +.... .++.++|+++++  ....+.|..++..... ...+ ...-.....|+++++|.+
T Consensus       161 ~~i~~~d~~~~~~~~~~~~~~~~p~gi~~d~~g~l~vs--d~~~~~i~~~~~~~~~-~~~~~~~~~~~P~~i~~d~~g~l  237 (260)
T d1rwia_         161 NRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVT--EHNTNQVVKLLAGSTT-STVLPFTGLNTPLAVAVDSDRTV  237 (260)
T ss_dssp             TEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEE--ETTTTEEEEECTTCSC-CEECCCCSCCCEEEEEECTTCCE
T ss_pred             ccccccccccceeeeeeccccCCCccceeeeeeeeeee--ecCCCEEEEEeCCCCe-EEEEccCCCCCeEEEEEeCCCCE
Confidence            8899999875432111    11111 278889988777  5667888888765433 2222 222345789999999988


Q ss_pred             EEEEeCCCcEEEEe
Q psy14511        420 VAAASADETISIWN  433 (488)
Q Consensus       420 l~t~~~dg~v~iw~  433 (488)
                      +++-..++.|+..+
T Consensus       238 ~vad~~~~rI~~i~  251 (260)
T d1rwia_         238 YVADRGNDRVVKLT  251 (260)
T ss_dssp             EEEEGGGTEEEEEC
T ss_pred             EEEECCCCEEEEEe
Confidence            87766667665444

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=98.92  E-value=3.7e-07  Score=77.87  Aligned_cols=214  Identities=8%  Similarity=0.023  Sum_probs=132.2

Q ss_pred             CCeEEEEECCCCceEEEEecCC-CCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecccc----ccEEEEE
Q psy14511        217 DTSVYTWNTKTNKTQLLVEYPT-YDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHM----HQVIAMC  291 (488)
Q Consensus       217 d~~v~iw~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~----~~v~~~~  291 (488)
                      +++|..||..++.......... ........++|.++++.++++ .....+..++..............    .....+.
T Consensus        45 ~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~l~va-d~~~~i~~~~~~g~~~~~~~~~~~g~~~~~pndl~  123 (314)
T d1pjxa_          45 AGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVA-DMRLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCA  123 (314)
T ss_dssp             CCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEE-ETTTEEEEEETTSCEEECCSBCTTSCBCBCCCEEE
T ss_pred             CCEEEEEECCCCcEEEEECCccccCCCcceeEEEeCCCCEEEEE-ECCCeEEEEeCCCcEEEEEeccccccccCCCcEEE
Confidence            5678889988876544332211 012346789999999988888 566678888877643322211111    1235566


Q ss_pred             e--cCCEEEEeec---------------CCeEEEEECcCCCccceeeecCCccEEEEEEccCCc----EEEEEe--cCeE
Q psy14511        292 W--NGNLLSCGTI---------------GGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGR----YLASGS--NNTV  348 (488)
Q Consensus       292 ~--~~~~l~~~~~---------------dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~----~l~~~~--d~~i  348 (488)
                      +  +|++.++-..               .|.|+.++..  ...... ...-...+.++|+|++.    .|..+.  .+.|
T Consensus       124 ~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~d--g~~~~~-~~~~~~pNGi~~~~d~d~~~~~lyv~d~~~~~i  200 (314)
T d1pjxa_         124 FDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD--GQMIQV-DTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKL  200 (314)
T ss_dssp             ECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT--SCEEEE-EEEESSEEEEEEEECTTSCEEEEEEEETTTTEE
T ss_pred             ECCCCCEEEecCccCcccccccceeccCCceEEEEeec--CceeEe-eCCcceeeeeEECCCCCcceeEEEEEeecccce
Confidence            6  5666665321               2344444432  222222 22222356899999874    455554  3889


Q ss_pred             EEEECCCCCCCccccee------------eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCC
Q psy14511        349 KIWDFRQLDAKRPLGLI------------VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPD  416 (488)
Q Consensus       349 ~iwd~~~~~~~~~~~~~------------~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~  416 (488)
                      ..||+...........+            -.++..+|+..++  ....+.|.+||.+.++.+..+..+....++++|.||
T Consensus       201 ~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa--~~~~g~I~~~dp~~g~~~~~i~~p~~~~t~~afg~d  278 (314)
T d1pjxa_         201 WSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVA--NWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQ  278 (314)
T ss_dssp             EEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEE--EETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTT
T ss_pred             EEeeccCccccceeeEEEEccccccccceeeEEecCCcEEEE--EcCCCEEEEEeCCCCEEEEEEECCCCCEEEEEEeCC
Confidence            99887643221111110            0167788987776  455789999999888887777766677899999999


Q ss_pred             CC-EEEEEeCCCcEEEEecCC
Q psy14511        417 QT-CVAAASADETISIWNCFP  436 (488)
Q Consensus       417 ~~-~l~t~~~dg~v~iw~~~~  436 (488)
                      ++ +++|.+.+|.|...++..
T Consensus       279 ~~~lyVt~~~~g~i~~~~~~~  299 (314)
T d1pjxa_         279 TKTIFVTEHENNAVWKFEWQR  299 (314)
T ss_dssp             SSEEEEEETTTTEEEEEECSS
T ss_pred             CCEEEEEECCCCcEEEEECCC
Confidence            97 456667778888887653

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=98.88  E-value=5.3e-06  Score=70.51  Aligned_cols=113  Identities=15%  Similarity=0.140  Sum_probs=76.9

Q ss_pred             ceEEEEEcCCCC----eEEEEeCCCCcEEEEECCcceeee------eecc-ccccEEEEEe--cCCEEEEeecCCeEEEE
Q psy14511        243 YISCVAWKPRTT----DLAVTNTCTEYIDLWHEQEERLIQ------KLRT-HMHQVIAMCW--NGNLLSCGTIGGNILHY  309 (488)
Q Consensus       243 ~i~~~~~~~~~~----~l~~~~~~~~~i~i~d~~~~~~~~------~~~~-~~~~v~~~~~--~~~~l~~~~~dg~i~i~  309 (488)
                      ..+.++|+|++.    .|+++.+..+.|..|++.....+.      .+.. .....-.+++  +|++.++....+.|.+|
T Consensus       173 ~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~g~I~~~  252 (314)
T d1pjxa_         173 FPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVF  252 (314)
T ss_dssp             SEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEE
T ss_pred             eeeeeEECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEccccccccceeeEEecCCcEEEEEcCCCEEEEE
Confidence            356889988764    566664788889998875432221      2222 1223456777  68888888888999999


Q ss_pred             ECcCCCccceeeecCCccEEEEEEccCCcEEEEE-ec-CeEEEEECCCC
Q psy14511        310 DVRTHSDYPTAITREGDVVCGLKWSPNGRYLASG-SN-NTVKIWDFRQL  356 (488)
Q Consensus       310 d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~d-~~i~iwd~~~~  356 (488)
                      |.+.+ .....+........+++|.|+++.|... ++ +.|...++...
T Consensus       253 dp~~g-~~~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~~~  300 (314)
T d1pjxa_         253 GPDGG-QPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN  300 (314)
T ss_dssp             CTTCB-SCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred             eCCCC-EEEEEEECCCCCEEEEEEeCCCCEEEEEECCCCcEEEEECCCC
Confidence            98764 3455555555668899999999755544 44 88888887644

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.87  E-value=5e-06  Score=70.98  Aligned_cols=219  Identities=10%  Similarity=0.054  Sum_probs=137.9

Q ss_pred             CCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeec----CCeEEEEECcCC
Q psy14511        241 NAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTI----GGNILHYDVRTH  314 (488)
Q Consensus       241 ~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~----dg~i~i~d~~~~  314 (488)
                      ...+..++|.++|+..++- ...+.|..|+...+...............+++  +|+++++...    .+.+...+....
T Consensus        39 ~~~lEG~~~D~~G~Ly~~D-~~~g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~~  117 (319)
T d2dg1a1          39 GLQLEGLNFDRQGQLFLLD-VFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGD  117 (319)
T ss_dssp             CCCEEEEEECTTSCEEEEE-TTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSC
T ss_pred             CcCcEeCEECCCCCEEEEE-CCCCEEEEEECCCCeEEEEEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCCCc
Confidence            3445789999999855555 78899999998876655555445556778888  6777776543    233444454443


Q ss_pred             Cccceeeec---CCccEEEEEEccCCcEEEEEec-------CeEEEEECCCCCCCcccceee----eeecCCCCEEEEEc
Q psy14511        315 SDYPTAITR---EGDVVCGLKWSPNGRYLASGSN-------NTVKIWDFRQLDAKRPLGLIV----PKLKREGRELVTSH  380 (488)
Q Consensus       315 ~~~~~~~~~---~~~~i~~~~~s~~~~~l~~~~d-------~~i~iwd~~~~~~~~~~~~~~----~~~~~~~~~l~~~~  380 (488)
                        .......   .....+.+++.|+|++.++...       +.+..++..............    .+|+|+++.|+++ 
T Consensus       118 --~~~~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~~~~~~~~~~~pnGia~s~dg~~lyva-  194 (319)
T d2dg1a1         118 --NLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVT-  194 (319)
T ss_dssp             --SCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEE-
T ss_pred             --eeeeeccCCCcccCCcceeEEeccceeecccccccccCcceeEEEecccceeEEEeeccceeeeeeeccccceEEEe-
Confidence              2222222   1234788999999997776432       335555544322111111111    2899999987765 


Q ss_pred             cCCCCeEEEEeCCC-cceeEEEe-------eccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccccc-------cc
Q psy14511        381 GKQDCSLKMWEYPR-LHLIEELK-------IHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKA-------RQ  445 (488)
Q Consensus       381 g~~~~~i~i~d~~~-~~~~~~~~-------~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~~-------~~  445 (488)
                      ....+.|+.|++.. +.......       ......-.+++.++|++.++....+.|.+++. .++.+...       .+
T Consensus       195 d~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p-~G~~l~~i~~P~~~~~~  273 (319)
T d2dg1a1         195 ETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGH  273 (319)
T ss_dssp             EGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTC
T ss_pred             cccCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECC-CCcEEEEEeCCCcCCCc
Confidence            56678999998753 22221111       11123568999999999888888999999995 56654322       22


Q ss_pred             cCCcceEEeecCCCceEEE
Q psy14511        446 VGSGSSLEFAILKQPVSLT  464 (488)
Q Consensus       446 ~~~v~~~~~s~~~~~~~~~  464 (488)
                      ...+.+++|.+++..+...
T Consensus       274 ~~~~~~~~~~~~~~~~~~t  292 (319)
T d2dg1a1         274 MLRSTHPQFIPGTNQLIIC  292 (319)
T ss_dssp             SCBCCEEEECTTSCEEEEE
T ss_pred             CceeeeEEEeCCCCEEEEE
Confidence            3457899999977665444

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.85  E-value=2.9e-07  Score=77.45  Aligned_cols=70  Identities=11%  Similarity=0.114  Sum_probs=48.9

Q ss_pred             EEccC--CcEEEEecCCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCc-cc--ceEEEEecCCCe
Q psy14511         43 KWSPN--GRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGI-CD--QTVRLWNSMNGK  116 (488)
Q Consensus        43 ~~sp~--g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~-~d--~~i~vwd~~~~~  116 (488)
                      ..|||  |+.+|..+++.|.+.|+.+++.. .   +..+.+.+...+|||||+.|+.+.... .+  ..|.+++..+++
T Consensus         5 ~~sPdi~G~~v~f~~~~dl~~~d~~~g~~~-~---Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~   79 (281)
T d1k32a2           5 LLNPDIHGDRIIFVCCDDLWEHDLKSGSTR-K---IVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGE   79 (281)
T ss_dssp             CEEEEEETTEEEEEETTEEEEEETTTCCEE-E---EECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTE
T ss_pred             ccCCCCCCCEEEEEeCCcEEEEECCCCCEE-E---EecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCc
Confidence            46899  99999988888999999875532 2   344567788999999999988765310 01  235555555554

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.83  E-value=6.2e-06  Score=70.35  Aligned_cols=216  Identities=13%  Similarity=0.109  Sum_probs=132.2

Q ss_pred             eeeeeeCC-CcEEEEE-CCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCC----CCcEEEEECCcc
Q psy14511        201 TSGLDWGY-HDTLAVA-LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTC----TEYIDLWHEQEE  274 (488)
Q Consensus       201 ~~~~~~~~-~~~~~~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~----~~~i~i~d~~~~  274 (488)
                      +..+.|+. ++++.+. ..++|+.|+..++........   .......++++++|+.+++. ..    .+.+...+....
T Consensus        42 lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~~~~~~~~---~~~~p~gla~~~dG~l~va~-~~~~~~~~~i~~~~~~~~  117 (319)
T d2dg1a1          42 LEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVS---HKANPAAIKIHKDGRLFVCY-LGDFKSTGGIFAATENGD  117 (319)
T ss_dssp             EEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEEC---SSSSEEEEEECTTSCEEEEE-CTTSSSCCEEEEECTTSC
T ss_pred             cEeCEECCCCCEEEEECCCCEEEEEECCCCeEEEEEeC---CCCCeeEEEECCCCCEEEEe-cCCCccceeEEEEcCCCc
Confidence            34566643 4566555 788899999887765444332   34567899999999877765 32    234555555544


Q ss_pred             eeeeeecc--ccccEEEEEe--cCCEEEEeec------CCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe
Q psy14511        275 RLIQKLRT--HMHQVIAMCW--NGNLLSCGTI------GGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS  344 (488)
Q Consensus       275 ~~~~~~~~--~~~~v~~~~~--~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~  344 (488)
                      ........  .......+.+  +|++.++...      .+.+..++...  .....+...-...+.++|+|+++.|..+.
T Consensus       118 ~~~~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg--~~~~~~~~~~~~pnGia~s~dg~~lyvad  195 (319)
T d2dg1a1         118 NLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDF--RTVTPIIQNISVANGIALSTDEKVLWVTE  195 (319)
T ss_dssp             SCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTS--CCEEEEEEEESSEEEEEECTTSSEEEEEE
T ss_pred             eeeeeccCCCcccCCcceeEEeccceeecccccccccCcceeEEEeccc--ceeEEEeeccceeeeeeeccccceEEEec
Confidence            33332221  1234566666  5776555322      12355555433  22233222233467899999999777665


Q ss_pred             --cCeEEEEECCCCCCC-ccccee------------eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEee------
Q psy14511        345 --NNTVKIWDFRQLDAK-RPLGLI------------VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKI------  403 (488)
Q Consensus       345 --d~~i~iwd~~~~~~~-~~~~~~------------~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~------  403 (488)
                        .+.|..|++...... ......            -.++..+|+..++  ....+.|.++|. +|+.+.++.-      
T Consensus       196 ~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va--~~~~g~V~~~~p-~G~~l~~i~~P~~~~~  272 (319)
T d2dg1a1         196 TTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVA--MYGQGRVLVFNK-RGYPIGQILIPGRDEG  272 (319)
T ss_dssp             GGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEE--EETTTEEEEECT-TSCEEEEEECTTGGGT
T ss_pred             ccCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEE--EcCCCEEEEECC-CCcEEEEEeCCCcCCC
Confidence              399999998643211 111110            0177788987777  466899999994 6888887753      


Q ss_pred             ccccEEEEEEcCCCCEEEEEeC
Q psy14511        404 HQERILSAVLSPDQTCVAAASA  425 (488)
Q Consensus       404 ~~~~v~~~~~s~~~~~l~t~~~  425 (488)
                      +...+++++|.|++..+++...
T Consensus       273 ~~~~~~~~~~~~~~~~~~~t~~  294 (319)
T d2dg1a1         273 HMLRSTHPQFIPGTNQLIICSN  294 (319)
T ss_dssp             CSCBCCEEEECTTSCEEEEEEE
T ss_pred             cCceeeeEEEeCCCCEEEEEcC
Confidence            3345789999998877766554

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.81  E-value=3.5e-07  Score=76.97  Aligned_cols=96  Identities=14%  Similarity=0.152  Sum_probs=66.8

Q ss_pred             ccC--CceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec--C-----CeEEEEeccccCcCCC
Q psy14511          2 CWN--GNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--N-----NTVKIWDFRQLDAKRP   72 (488)
Q Consensus         2 ~~d--g~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~--d-----~~i~vwd~~~~~~~~~   72 (488)
                      ++|  |+.+|..+ +|.|.+.|+.+++.  +.+..+.+.+...+|||||+.||...  +     ..|.+++..+++..+.
T Consensus         7 sPdi~G~~v~f~~-~~dl~~~d~~~g~~--~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~l   83 (281)
T d1k32a2           7 NPDIHGDRIIFVC-CDDLWEHDLKSGST--RKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRI   83 (281)
T ss_dssp             EEEEETTEEEEEE-TTEEEEEETTTCCE--EEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEEC
T ss_pred             CCCCCCCEEEEEe-CCcEEEEECCCCCE--EEEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceEEe
Confidence            457  99998764 67788889988763  55777888899999999999999764  2     2477777776553322


Q ss_pred             cccc---cccccceeEEEEecCCCeEEeeeC
Q psy14511         73 QVNN---QCHLSAVKAIAWCPWEPTLLATGG  100 (488)
Q Consensus        73 ~~~~---~~h~~~v~~l~~~~~~~~l~~~~~  100 (488)
                      ....   ...........|+|||+.++.+..
T Consensus        84 t~~~~~~~~~~~~~~~~~~spdg~~l~~~~~  114 (281)
T d1k32a2          84 TYFSGKSTGRRMFTDVAGFDPDGNLIISTDA  114 (281)
T ss_dssp             CCCCEEEETTEECSEEEEECTTCCEEEEECT
T ss_pred             eecCCCccCccccccccccCCCCCEEEEEEc
Confidence            1111   112234567889999998877644

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.74  E-value=1.8e-05  Score=66.04  Aligned_cols=229  Identities=10%  Similarity=0.072  Sum_probs=130.0

Q ss_pred             cCCceEEEeecCCeEEEEEcccCcccceee-----cccCceEEEEEEccC-CcEEEEec--CCeEEEEeccccCcCCCcc
Q psy14511          3 WNGNLLSCGTIGGNILHYDVRTHSDYPTAI-----TREGDVVCGLKWSPN-GRYLASGS--NNTVKIWDFRQLDAKRPQV   74 (488)
Q Consensus         3 ~dg~~la~g~~dg~i~iwd~~~~~~~~~~~-----~~h~~~V~~l~~sp~-g~~las~~--d~~i~vwd~~~~~~~~~~~   74 (488)
                      .||+++++-..++.|++||.+ ++.+...-     .+....-..+++.++ +.++++..  ++.|.+++... ...... 
T Consensus        32 ~dg~i~VaD~~n~rI~v~d~~-G~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g-~~~~~~-  108 (279)
T d1q7fa_          32 AQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYG-QFVRKF-  108 (279)
T ss_dssp             TTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTTS-CEEEEE-
T ss_pred             CCCCEEEEECCCCEEEEEeCC-CCEEEEecccCCCcccccccccccccccccccceeccCCccccccccccc-cceeec-
Confidence            367777776677788888865 32221110     011122345566554 44555443  67888887643 211111 


Q ss_pred             cccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeecc
Q psy14511         75 NNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEID  154 (488)
Q Consensus        75 ~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (488)
                       -.........+++.+++..+++...   .+.+.+++. +++.+..+.......                          
T Consensus       109 -~~~~~~~p~~~avd~~G~i~v~~~~---~~~~~~~~~-~g~~~~~~g~~~~~~--------------------------  157 (279)
T d1q7fa_         109 -GATILQHPRGVTVDNKGRIIVVECK---VMRVIIFDQ-NGNVLHKFGCSKHLE--------------------------  157 (279)
T ss_dssp             -CTTTCSCEEEEEECTTSCEEEEETT---TTEEEEECT-TSCEEEEEECTTTCS--------------------------
T ss_pred             -CCCcccccceeccccCCcEEEEeec---cceeeEecc-CCceeeccccccccc--------------------------
Confidence             1123455778889888875555444   667777774 444444332211100                          


Q ss_pred             ccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC-CCcEEEE-ECCCeEEEEECCCCceEE
Q psy14511        155 RKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG-YHDTLAV-ALDTSVYTWNTKTNKTQL  232 (488)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~d~~v~iw~~~~~~~~~  232 (488)
                                                                   ....+... .+.++++ ...+.|++|+... +...
T Consensus       158 ---------------------------------------------~~~~i~~d~~g~i~v~d~~~~~V~~~d~~G-~~~~  191 (279)
T d1q7fa_         158 ---------------------------------------------FPNGVVVNDKQEIFISDNRAHCVKVFNYEG-QYLR  191 (279)
T ss_dssp             ---------------------------------------------SEEEEEECSSSEEEEEEGGGTEEEEEETTC-CEEE
T ss_pred             ---------------------------------------------ccceeeeccceeEEeeeccccceeeeecCC-ceee
Confidence                                                         00111111 2344444 3678899998754 4444


Q ss_pred             EEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecc--ccccEEEEEe--cCCEEEEeecCCeEEE
Q psy14511        233 LVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRT--HMHQVIAMCW--NGNLLSCGTIGGNILH  308 (488)
Q Consensus       233 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~--~~~~v~~~~~--~~~~l~~~~~dg~i~i  308 (488)
                      .+..++ .......+++.++|+.+++-...++.|.+|+. +++.+..+..  .......+++  +|+ |++++.++.|++
T Consensus       192 ~~g~~g-~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~-~G~~~~~~~~~~~~~~p~~vav~~dG~-l~V~~~n~~v~~  268 (279)
T d1q7fa_         192 QIGGEG-ITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGS-VVLASKDYRLYI  268 (279)
T ss_dssp             EESCTT-TSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTE-EEEEETTTEEEE
T ss_pred             eecccc-cccCCcccccccCCeEEEEECCCCcEEEEECC-CCCEEEEEeCCCCCCCEeEEEEeCCCc-EEEEeCCCeEEE
Confidence            444334 45568899999999866664234557999984 4666666533  2234566666  555 555667899999


Q ss_pred             EECcCC
Q psy14511        309 YDVRTH  314 (488)
Q Consensus       309 ~d~~~~  314 (488)
                      |.....
T Consensus       269 fr~~~~  274 (279)
T d1q7fa_         269 YRYVQL  274 (279)
T ss_dssp             EECSCC
T ss_pred             EEeeee
Confidence            998764

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.57  E-value=8.3e-05  Score=62.27  Aligned_cols=99  Identities=10%  Similarity=0.049  Sum_probs=67.5

Q ss_pred             ceEEEEEcCCCCeEEEEeCCCCcEEEEECCcc--------eeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECc
Q psy14511        243 YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEE--------RLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVR  312 (488)
Q Consensus       243 ~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~--------~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~  312 (488)
                      ..+.++|+++++.++.+.+..+.|..|++...        .......+.......+++  +|++.++.-..+.|..||..
T Consensus       149 ~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp~  228 (295)
T d2ghsa1         149 IPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD  228 (295)
T ss_dssp             SEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT
T ss_pred             CcceeeecCCCceEEEeecccceeeEeeecccccccccceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEecCC
Confidence            45688999999988877677889998887431        111222334455667777  57777777778899999965


Q ss_pred             CCCccceeeecCCccEEEEEEc-cCCcEEEEE
Q psy14511        313 THSDYPTAITREGDVVCGLKWS-PNGRYLASG  343 (488)
Q Consensus       313 ~~~~~~~~~~~~~~~i~~~~~s-~~~~~l~~~  343 (488)
                      .  +....+.-....+++++|- ||.+.|...
T Consensus       229 G--~~~~~i~lP~~~~T~~~FGG~d~~~LyvT  258 (295)
T d2ghsa1         229 G--NHIARYEVPGKQTTCPAFIGPDASRLLVT  258 (295)
T ss_dssp             C--CEEEEEECSCSBEEEEEEESTTSCEEEEE
T ss_pred             C--cEeeEecCCCCceEEEEEeCCCCCEEEEE
Confidence            3  3555555555668999995 676655543

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.52  E-value=6.9e-05  Score=62.76  Aligned_cols=213  Identities=9%  Similarity=-0.025  Sum_probs=135.0

Q ss_pred             EEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeee
Q psy14511        245 SCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAIT  322 (488)
Q Consensus       245 ~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~  322 (488)
                      .+..|++....|...--..+.|..||..+++.. .+. ....+.++.+  ++++++ ++.+ .+..+|..+++.......
T Consensus        21 Egp~wd~~~~~l~wvDi~~~~I~r~d~~~g~~~-~~~-~~~~~~~i~~~~dg~l~v-a~~~-gl~~~d~~tg~~~~l~~~   96 (295)
T d2ghsa1          21 EGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLI-ASDD-GLFLRDTATGVLTLHAEL   96 (295)
T ss_dssp             EEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEE-EETT-EEEEEETTTCCEEEEECS
T ss_pred             eCCeEECCCCEEEEEECCCCEEEEEECCCCeEE-EEE-CCCCcEEEEEecCCCEEE-EEeC-ccEEeecccceeeEEeee
Confidence            356688766666665356788999998886543 222 2345667777  455554 4554 588999987642111111


Q ss_pred             c---CCccEEEEEEccCCcEEEEEec-----CeEEEEECCCCCCCccccee----eeeecCCCCEEEEEccCCCCeEEEE
Q psy14511        323 R---EGDVVCGLKWSPNGRYLASGSN-----NTVKIWDFRQLDAKRPLGLI----VPKLKREGRELVTSHGKQDCSLKMW  390 (488)
Q Consensus       323 ~---~~~~i~~~~~s~~~~~l~~~~d-----~~i~iwd~~~~~~~~~~~~~----~~~~~~~~~~l~~~~g~~~~~i~i~  390 (488)
                      .   ....++.+.+.|+|++.++..+     +.-.+|.+..++........    -..|+++++.++.+ .+..+.|+.+
T Consensus        97 ~~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~~~~~~Ng~~~s~d~~~l~~~-dt~~~~I~~~  175 (295)
T d2ghsa1          97 ESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFADISIPNSICFSPDGTTGYFV-DTKVNRLMRV  175 (295)
T ss_dssp             STTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEEEESSEEEEEECTTSCEEEEE-ETTTCEEEEE
T ss_pred             ecCCCcccceeeEECCCCCEEEEeccccccccceeEeeecCCcEEEEeeccCCcceeeecCCCceEEEe-ecccceeeEe
Confidence            1   1235789999999998776541     45566766655433222222    11899999987765 5678889988


Q ss_pred             eCCC--c----ce--eEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccccccc-cCCcceEEee-cCCCc
Q psy14511        391 EYPR--L----HL--IEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKARQ-VGSGSSLEFA-ILKQP  460 (488)
Q Consensus       391 d~~~--~----~~--~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~~~~-~~~v~~~~~s-~~~~~  460 (488)
                      ++..  +    +.  ...+.+..+....+++..+|++.++.-..+.|..||. +++....... ...+++++|- |+.+.
T Consensus       176 ~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp-~G~~~~~i~lP~~~~T~~~FGG~d~~~  254 (295)
T d2ghsa1         176 PLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASR  254 (295)
T ss_dssp             EBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCE
T ss_pred             eecccccccccceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEecC-CCcEeeEecCCCCceEEEEEeCCCCCE
Confidence            8742  1    11  1122233456788999999998888777889999995 4665544333 3468899996 56555


Q ss_pred             eEE
Q psy14511        461 VSL  463 (488)
Q Consensus       461 ~~~  463 (488)
                      +-+
T Consensus       255 Lyv  257 (295)
T d2ghsa1         255 LLV  257 (295)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            533

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.26  E-value=0.00061  Score=54.81  Aligned_cols=215  Identities=8%  Similarity=0.125  Sum_probs=138.7

Q ss_pred             eeeCCCcEEEEE----CCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeee
Q psy14511        204 LDWGYHDTLAVA----LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQK  279 (488)
Q Consensus       204 ~~~~~~~~~~~~----~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~  279 (488)
                      +...++++++.-    ....|.+.|+..+........      ...+.-.+|..+.|+.- + ...+.+||+++.+.++.
T Consensus        27 ~T~ESDkyicVRe~~~~~~~VvIidl~n~~~~~Rrpi------~AdsAIMhP~~~IiALr-a-g~~LQiFnletK~klks   98 (327)
T d1utca2          27 LTMESDKFICIREKVGEQAQVVIIDMNDPSNPIRRPI------SADSAIMNPASKVIALK-A-GKTLQIFNIEMKSKMKA   98 (327)
T ss_dssp             EECSSSSEEEEEEEETTEEEEEEEETTSTTSCEEEEC------CCSEEEECSSSSEEEEE-E-TTEEEEEETTTTEEEEE
T ss_pred             EEEecCCEEEEEeccCCCceEEEEECCCCCcceeccc------chhhhhcCCCCcEEEEe-c-CCeEEEEehhHhhhhce
Confidence            444566777654    345788899887654333332      12345578999888887 3 66899999999888887


Q ss_pred             eccccccEEEEEe-cCCEEEEeecCCeEEEEECcCCCccceeeecCC----ccEEEEEEccCCcEEEEEe----c----C
Q psy14511        280 LRTHMHQVIAMCW-NGNLLSCGTIGGNILHYDVRTHSDYPTAITREG----DVVCGLKWSPNGRYLASGS----N----N  346 (488)
Q Consensus       280 ~~~~~~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~----~~i~~~~~s~~~~~l~~~~----d----~  346 (488)
                      ..- ..+|.-..| +.+.|+..+ +..|+-|+++....+.+.+..|.    ..|..-..+++.++++..+    +    |
T Consensus        99 ~~~-~e~VvfWkWis~~~L~lVT-~taVYHW~~~g~s~P~k~fdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G  176 (327)
T d1utca2          99 HTM-TDDVTFWKWISLNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVG  176 (327)
T ss_dssp             EEC-SSCCCEEEESSSSEEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEE
T ss_pred             EEc-CCCcEEEEecCCCEEEEEc-CCceEEEcccCCCCchhhhhhcccccCceEEEEEECCCCCEEEEEeEecCCCceeE
Confidence            754 446766777 777777765 45699999976555666665553    4577777788888776542    1    6


Q ss_pred             eEEEEECCCCCCCccccee--------------------------------------------------ee---------
Q psy14511        347 TVKIWDFRQLDAKRPLGLI--------------------------------------------------VP---------  367 (488)
Q Consensus       347 ~i~iwd~~~~~~~~~~~~~--------------------------------------------------~~---------  367 (488)
                      .+.+|..+.... +.+..+                                                  +.         
T Consensus       177 ~mQLYS~er~~s-Q~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~~~kLhIiEig~~~~g~~~f~kk~vdi~fppea~~  255 (327)
T d1utca2         177 AMQLYSVDRKVS-QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQN  255 (327)
T ss_dssp             EEEEEETTTTEE-EEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSCCCTTCCCCCCEEEECCCCTTCTT
T ss_pred             EEEEEEeccCcC-ccccceeeeeEEEEcCCCCCCceEEEEEECCCCCcEEEEEEcCCCccCCCCCcceeEEEECCccccC
Confidence            677777764411 111000                                                  00         


Q ss_pred             ------eecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEE
Q psy14511        368 ------KLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISI  431 (488)
Q Consensus       368 ------~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~i  431 (488)
                            ..++.-..+..  -..-|.+++||++++.++..-+-....|...+-..+..-++....+|.|..
T Consensus       256 DFPvamqvs~kygiiyv--iTK~G~i~lyDleTgt~i~~nRIs~~~iF~~a~~~~~~Gi~~VNr~GqVl~  323 (327)
T d1utca2         256 DFPVAMQISEKHDVVFL--ITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLS  323 (327)
T ss_dssp             CCEEEEEEETTTTEEEE--EETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTSEEEE
T ss_pred             CcEEEEEeeccCCEEEE--EecCcEEEEEEcccccEEEEeecCCCceEEeccCCCCceEEEECCCCeEEE
Confidence                  22233333333  256788999999999988877766677775555555555566667776654

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=98.24  E-value=0.0014  Score=60.11  Aligned_cols=241  Identities=12%  Similarity=0.015  Sum_probs=132.3

Q ss_pred             CCeEEEEECCCCceEEEEecCCC----------------------------------CCCce-EEEEEcCCCCeEEEEeC
Q psy14511        217 DTSVYTWNTKTNKTQLLVEYPTY----------------------------------DNAYI-SCVAWKPRTTDLAVTNT  261 (488)
Q Consensus       217 d~~v~iw~~~~~~~~~~~~~~~~----------------------------------~~~~i-~~~~~~~~~~~l~~~~~  261 (488)
                      .|.|+-+|+.+++.+-.......                                  ....+ ...++.++...++.+ .
T Consensus       175 ~G~v~a~D~~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gg~vW~~~s~D~~~g~~y~~-t  253 (571)
T d2ad6a1         175 RGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYG-S  253 (571)
T ss_dssp             CCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEE-C
T ss_pred             cCcEEEEECCCCcEEEEEeccCCcccccccccccccccccCcccccccccCCcccccCCCccccccccchhcCeeeee-c
Confidence            67899999999987765442210                                  00111 234666777766665 3


Q ss_pred             C----------------CCcEEEEECCcceeeeeeccccc-----------cEEEEEecCC---EEEEeecCCeEEEEEC
Q psy14511        262 C----------------TEYIDLWHEQEERLIQKLRTHMH-----------QVIAMCWNGN---LLSCGTIGGNILHYDV  311 (488)
Q Consensus       262 ~----------------~~~i~i~d~~~~~~~~~~~~~~~-----------~v~~~~~~~~---~l~~~~~dg~i~i~d~  311 (488)
                      .                ...+.-.|.++++.+..++....           ....+..+++   .++.++.+|.+++.|.
T Consensus       254 g~~~p~~~~~r~g~n~~s~svvAld~~TG~~~W~~q~~~~D~Wd~D~~~~~~l~~~~~~g~~~~~v~~~~k~G~l~vlDr  333 (571)
T d2ad6a1         254 GNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNR  333 (571)
T ss_dssp             CCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEET
T ss_pred             ccccCccccccccccccccceeeeeccchhheecccccCccccccccccccceeeeeccCccccceeeccccceEEEEec
Confidence            3                34577789999988877654221           2223334543   5677889999999998


Q ss_pred             cCCCccceeeec------------CCccE--------------------------EEEEEccCCcEEEEEecCeEEEEEC
Q psy14511        312 RTHSDYPTAITR------------EGDVV--------------------------CGLKWSPNGRYLASGSNNTVKIWDF  353 (488)
Q Consensus       312 ~~~~~~~~~~~~------------~~~~i--------------------------~~~~~s~~~~~l~~~~d~~i~iwd~  353 (488)
                      .+++........            ...++                          ...+++|+..+++.........|..
T Consensus       334 ~tG~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~p~~~Gg~~w~~~a~dP~~~~~yv~~~~~~~~~~~  413 (571)
T d2ad6a1         334 ENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEP  413 (571)
T ss_dssp             TTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEE
T ss_pred             CCCcEeeeeccCCcccccccccccccccccCcccccccccCceEEEeccccccccccceECCCCceEEEecccccccccc
Confidence            886532110000            00000                          1256777777777665332233332


Q ss_pred             CCCCCCcccce--eeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEE
Q psy14511        354 RQLDAKRPLGL--IVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISI  431 (488)
Q Consensus       354 ~~~~~~~~~~~--~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~i  431 (488)
                      ...........  ......+....   ......|.|.-+|+.+++.+-+...- .+..+-..+-.+.++++++.||.++-
T Consensus       414 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~G~l~AiD~~TG~~~W~~~~~-~~~~~g~l~TagglVf~G~~dg~l~A  489 (571)
T d2ad6a1         414 FMLPYRAGQFFVGATLAMYPGPNG---PTKKEMGQIRAFDLTTGKAKWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKA  489 (571)
T ss_dssp             CCCCCCTTSCCCCEEEEEEECTTS---TTSCCCEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEE
T ss_pred             ccccccCCccccccceeeccccCC---cccCCcccEEEeccCCCceeeEcCCC-CCCCcceeEecCCEEEEECCCCeEEE
Confidence            21111000000  00000000000   00123467889999999988765422 11111112235668888999999999


Q ss_pred             EecCCCCccccccccCCcc--eEEeecCCCceE
Q psy14511        432 WNCFPRDKKRKARQVGSGS--SLEFAILKQPVS  462 (488)
Q Consensus       432 w~~~~~~~~~~~~~~~~v~--~~~~s~~~~~~~  462 (488)
                      +|.++++.+-.......+.  =+.|..+|+...
T Consensus       490 ~Da~tGe~lW~~~l~~~~~a~P~ty~~dGkqYi  522 (571)
T d2ad6a1         490 LDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYI  522 (571)
T ss_dssp             EETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred             EECCCCcEEEEEECCCCceecceEEEECCEEEE
Confidence            9999999985544444433  366777887654

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.20  E-value=0.00091  Score=54.47  Aligned_cols=250  Identities=10%  Similarity=0.054  Sum_probs=141.0

Q ss_pred             CceEEEeecCCeEEEEEcccCccc----ceeecccCceEEEEEEccCCcEEEEec--CCeEEEEeccccCcCCCcccccc
Q psy14511          5 GNLLSCGTIGGNILHYDVRTHSDY----PTAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAKRPQVNNQC   78 (488)
Q Consensus         5 g~~la~g~~dg~i~iwd~~~~~~~----~~~~~~h~~~V~~l~~sp~g~~las~~--d~~i~vwd~~~~~~~~~~~~~~~   78 (488)
                      |.+|+.+. .+.|+-.+++.....    ...+..+...+.+++|.+..+.|.-..  ++.|+..+++.... ..+  ...
T Consensus         1 ~~fLl~s~-~~~I~~~~ld~~~~~~~~~~~~~~~~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~-~~v--~~~   76 (263)
T d1npea_           1 GTHLLFAQ-TGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEP-TTI--IRQ   76 (263)
T ss_dssp             CEEEEEEE-EEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC-EEE--ECT
T ss_pred             CCEEEEeC-CCeEEEEECCCccccccccccccccCCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCc-EEE--EEe
Confidence            45666544 567888887654311    122444556688999999888777765  78898888875332 222  122


Q ss_pred             cccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccce
Q psy14511         79 HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKV  158 (488)
Q Consensus        79 h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (488)
                      -...+..+++..-+..|..+...  .+.|.+.++........+.........             +              
T Consensus        77 ~~~~p~~iAvD~~~~~lY~~d~~--~~~I~~~~~dg~~~~~l~~~~l~~p~~-------------l--------------  127 (263)
T d1npea_          77 DLGSPEGIALDHLGRTIFWTDSQ--LDRIEVAKMDGTQRRVLFDTGLVNPRG-------------I--------------  127 (263)
T ss_dssp             TCCCEEEEEEETTTTEEEEEETT--TTEEEEEETTSCSCEEEECSSCSSEEE-------------E--------------
T ss_pred             ccccccEEEEeccCCeEEEeccC--CCEEEEEecCCceEEEEecccccCCcE-------------E--------------
Confidence            23467889998777777777653  778999988644322111111000000             0              


Q ss_pred             eccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEEC---CCeEEEEECCCCceEEEEe
Q psy14511        159 LNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVAL---DTSVYTWNTKTNKTQLLVE  235 (488)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---d~~v~iw~~~~~~~~~~~~  235 (488)
                                                                  .++...+.++-...   ...|..-++..........
T Consensus       128 --------------------------------------------~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~~~i~~  163 (263)
T d1npea_         128 --------------------------------------------VTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQ  163 (263)
T ss_dssp             --------------------------------------------EEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEEC
T ss_pred             --------------------------------------------EEecccCcEEEeecCCCCcEEEEecCCCCCceeeee
Confidence                                                        01111222322221   1234444454433333322


Q ss_pred             cCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEecCCEEEEe-ecCCeEEEEECcCC
Q psy14511        236 YPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCG-TIGGNILHYDVRTH  314 (488)
Q Consensus       236 ~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~-~~dg~i~i~d~~~~  314 (488)
                      .   .-.....+++.+.++.|+.+....+.|...++........+.+.. ....+++++..|... ...+.|...|..++
T Consensus       164 ~---~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~g~~~~~v~~~~~-~P~~lav~~~~lYwtd~~~~~I~~~~~~~g  239 (263)
T d1npea_         164 D---NLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQ-YPFAVTSYGKNLYYTDWKTNSVIAMDLAIS  239 (263)
T ss_dssp             T---TCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCC-SEEEEEEETTEEEEEETTTTEEEEEETTTT
T ss_pred             e---cccccceEEEeecCcEEEEEeCCCCEEEEEECCCCCeEEEECCCC-CcEEEEEECCEEEEEECCCCEEEEEECCCC
Confidence            1   334668999999888887774667889999998755444444433 235777765555544 46688888888876


Q ss_pred             CccceeeecCCccEEEEEEcc
Q psy14511        315 SDYPTAITREGDVVCGLKWSP  335 (488)
Q Consensus       315 ~~~~~~~~~~~~~i~~~~~s~  335 (488)
                      +...............++..+
T Consensus       240 ~~~~~~~~~~~~~~~gi~v~~  260 (263)
T d1npea_         240 KEMDTFHPHKQTRLYGITIAL  260 (263)
T ss_dssp             EEEEEECCSSCCCCCCEEEEC
T ss_pred             ccceEECCCCCCCcceEEEeC
Confidence            433333333334444555444

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.11  E-value=0.00024  Score=60.57  Aligned_cols=207  Identities=14%  Similarity=0.146  Sum_probs=123.9

Q ss_pred             EEEEE-CCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcC--CCCeEEEEeCCC------------------CcEEEE
Q psy14511        211 TLAVA-LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKP--RTTDLAVTNTCT------------------EYIDLW  269 (488)
Q Consensus       211 ~~~~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~~~------------------~~i~i~  269 (488)
                      +++.. .+.+|.+.|+++.+..++.+.+  ....+..+...+  .-.+++.. +..                  +.+...
T Consensus       102 lFVNDkan~RVAvIdl~~fkt~kIi~iP--n~~~~HG~r~~~~p~T~YV~~~-~e~~vP~pndg~~l~d~~~y~~~~t~I  178 (459)
T d1fwxa2         102 LFMNDKANTRVARVRCDVMKCDAILEIP--NAKGIHGLRPQKWPRSNYVFCN-GEDETPLVNDGTNMEDVANYVNVFTAV  178 (459)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEEECS--SCCSEEEEEECCSSBCSEEEEE-ECSCEESSCSSSSTTCGG-EEEEEEEE
T ss_pred             EEEEcCCCceEEEEECcceeeeEEEecC--CCCCCceeecccCCCeEEEEcc-CccccccCCCCccccchhhcceEEEEE
Confidence            44444 7899999999999998888876  455667777655  44566655 332                  235677


Q ss_pred             ECCcceeeeeecccc-ccEEEEEecCCEEEEeecCC--------------------------------------eEEEEE
Q psy14511        270 HEQEERLIQKLRTHM-HQVIAMCWNGNLLSCGTIGG--------------------------------------NILHYD  310 (488)
Q Consensus       270 d~~~~~~~~~~~~~~-~~v~~~~~~~~~l~~~~~dg--------------------------------------~i~i~d  310 (488)
                      |..+.+....+.-.. -.-.+...+|+++++.+.+.                                      .+.+-|
T Consensus       179 D~~tm~V~~QV~V~g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~Gk~~eingV~VVD  258 (459)
T d1fwxa2         179 DADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVD  258 (459)
T ss_dssp             ETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEE
T ss_pred             ecCCceEEEEeeeCCChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhcCCcEEeCCceeec
Confidence            888776665553221 11233444788777765431                                      123334


Q ss_pred             CcCC--CccceeeecCCccEEEEEEccCCcEEEEEe--cCeEEEEECCCCCCC----------------cccceeeeeec
Q psy14511        311 VRTH--SDYPTAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAK----------------RPLGLIVPKLK  370 (488)
Q Consensus       311 ~~~~--~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--d~~i~iwd~~~~~~~----------------~~~~~~~~~~~  370 (488)
                      .+..  ......+....+ ...+.++|||+++++++  +.++.++|+++....                --+..+..+|.
T Consensus       259 ~~~~~~~~v~~yIPVpKs-PHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~~~~~~~~~e~elglgPLht~fd  337 (459)
T d1fwxa2         259 GRKEASSLFTRYIPIANN-PHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFD  337 (459)
T ss_dssp             CSGG--CSSEEEEEEESS-CCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-GGGGEEECCBCCSCEEEEEEC
T ss_pred             ccccCCcceeEEEecCCC-CCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhcccCCccccEEeecccCcCccccccC
Confidence            3321  112222222222 45789999999999998  499999999743210                01122233888


Q ss_pred             CCCCEEEEEccCCCCeEEEEeCCCc----------ceeEEEeeccccEEEE------EEcCCCCEEEEEe
Q psy14511        371 REGRELVTSHGKQDCSLKMWEYPRL----------HLIEELKIHQERILSA------VLSPDQTCVAAAS  424 (488)
Q Consensus       371 ~~~~~l~~~~g~~~~~i~i~d~~~~----------~~~~~~~~~~~~v~~~------~~s~~~~~l~t~~  424 (488)
                      ..|.-..+  -.-|.+|.-|++...          ..+..+.-|-. +-.+      ...|||++|++..
T Consensus       338 ~~g~ayts--lfids~v~kw~~~~~~~~~~~~~~~~v~~k~~v~y~-~gh~~~~~g~t~~~dgk~l~~~n  404 (459)
T d1fwxa2         338 GRGNAYTS--LFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQ-PGHLKTVMGETLDATNDWLVCLS  404 (459)
T ss_dssp             TTSEEEEE--ETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSC-EEEEEETTTTSTTCCSSEEEEEE
T ss_pred             CCceEEEE--eeccceEEEEecchhhhhhccccCCcceeccccccC-CCCCccCcCCcCCCCCCEEEEec
Confidence            87743333  578999999998532          34455543322 1122      3468999999875

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=98.05  E-value=0.0012  Score=57.55  Aligned_cols=113  Identities=12%  Similarity=0.109  Sum_probs=69.9

Q ss_pred             cCCceEEEeecCC-----------eEEEEEcccCcccc--eeecccCceEEEEEEccCCcEEEEec--CCeEEEEecccc
Q psy14511          3 WNGNLLSCGTIGG-----------NILHYDVRTHSDYP--TAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQL   67 (488)
Q Consensus         3 ~dg~~la~g~~dg-----------~i~iwd~~~~~~~~--~~~~~h~~~V~~l~~sp~g~~las~~--d~~i~vwd~~~~   67 (488)
                      .||++++.|+.+.           .+.+||..++.-..  .....|.......++.++|++++.|+  ...+.+||..+.
T Consensus        29 ~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~~~~yd~~~~  108 (387)
T d1k3ia3          29 TSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSD  108 (387)
T ss_dssp             TTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGT
T ss_pred             eCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeecCCCcceeEecCccC
Confidence            4899999888431           37799998875322  12233433344567889999999987  478999998864


Q ss_pred             CcCCCcccccccccceeEEEEecCCCeEEeeeCCc---ccceEEEEecCCCee
Q psy14511         68 DAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGI---CDQTVRLWNSMNGKE  117 (488)
Q Consensus        68 ~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~---~d~~i~vwd~~~~~~  117 (488)
                      .-. ....+... ..-...+..+|++.++..+...   .-..+.+||..+.+-
T Consensus       109 ~w~-~~~~~~~~-r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~W  159 (387)
T d1k3ia3         109 SWI-PGPDMQVA-RGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTW  159 (387)
T ss_dssp             EEE-ECCCCSSC-CSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEE
T ss_pred             ccc-cccccccc-ccccceeeecCCceeeeccccccccccceeeeecCCCCce
Confidence            322 12112111 1223566778887666655320   114688999887754

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=97.99  E-value=0.0039  Score=54.11  Aligned_cols=75  Identities=16%  Similarity=0.116  Sum_probs=44.4

Q ss_pred             EEEEEccCCcEEEEec-C-----C------eEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceE
Q psy14511         40 CGLKWSPNGRYLASGS-N-----N------TVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTV  107 (488)
Q Consensus        40 ~~l~~sp~g~~las~~-d-----~------~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i  107 (488)
                      .......+|+.++.|+ +     +      .+.+||..++.-.........|.......++.++++.++..+..  ...+
T Consensus        23 ~~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~--~~~~  100 (387)
T d1k3ia3          23 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGND--AKKT  100 (387)
T ss_dssp             EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSS--TTCE
T ss_pred             EEEEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeecCC--Ccce
Confidence            3444556889888776 1     1      47899998765433221122233333456788898765554442  4678


Q ss_pred             EEEecCCCe
Q psy14511        108 RLWNSMNGK  116 (488)
Q Consensus       108 ~vwd~~~~~  116 (488)
                      .+||..+..
T Consensus       101 ~~yd~~~~~  109 (387)
T d1k3ia3         101 SLYDSSSDS  109 (387)
T ss_dssp             EEEEGGGTE
T ss_pred             eEecCccCc
Confidence            888876654

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=97.86  E-value=0.0096  Score=54.31  Aligned_cols=79  Identities=9%  Similarity=0.065  Sum_probs=53.3

Q ss_pred             CCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccccccccCCcc--eEEeecCCCce
Q psy14511        384 DCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKARQVGSGS--SLEFAILKQPV  461 (488)
Q Consensus       384 ~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~~~~~~~v~--~~~~s~~~~~~  461 (488)
                      .|.+.-+|+.+++.+-+.... .+..+-..+-.+.++++++.||.++-+|.++++.+-.......+.  =+.|..+|+..
T Consensus       437 ~G~l~A~D~~tGk~~W~~~~~-~~~~gg~l~TagglVF~G~~dg~l~A~Da~tGe~LW~~~l~~~~~~~P~ty~~dGkqy  515 (560)
T d1kv9a2         437 SGALLAWDPVKQKAAWKVPYP-THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQY  515 (560)
T ss_dssp             EEEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred             ccceEEEeCCCCeEeeeccCC-CCCCCceeEECCCEEEEECCCCcEEEEECCCCcEeEEEECCCCccccCEEEEECCEEE
Confidence            467888999999988776532 222222233457788899999999999999999984433333322  25666788754


Q ss_pred             EE
Q psy14511        462 SL  463 (488)
Q Consensus       462 ~~  463 (488)
                      ..
T Consensus       516 v~  517 (560)
T d1kv9a2         516 VA  517 (560)
T ss_dssp             EE
T ss_pred             EE
Confidence            33

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.80  E-value=0.0091  Score=54.82  Aligned_cols=78  Identities=9%  Similarity=-0.004  Sum_probs=52.9

Q ss_pred             CeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccccccccCC--cceEEeecCCCceE
Q psy14511        385 CSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKARQVGS--GSSLEFAILKQPVS  462 (488)
Q Consensus       385 ~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~~~~~~~--v~~~~~s~~~~~~~  462 (488)
                      |.|.-||+.+++.+-... +..+..+-..+-.+.+++.|+.||.++-+|..+++.+-.......  ..=+.|..+|+...
T Consensus       453 G~l~A~D~~TG~~~W~~~-~~~~~~gg~lsTagglVF~G~~Dg~l~A~Da~TGe~LW~~~~~~~~~a~P~tY~~dGkQYv  531 (596)
T d1w6sa_         453 GQIKAYNAITGDYKWEKM-ERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQYV  531 (596)
T ss_dssp             EEEEEECTTTCCEEEEEE-ESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred             ceEEEEeCCCCceecccC-CCCCCccceeEecCCEEEEECCCCeEEEEECCCCcEeeEEECCCCcccCCeEEEECCEEEE
Confidence            678889999999876654 222333223344677888899999999999999999844333222  23355677887644


Q ss_pred             E
Q psy14511        463 L  463 (488)
Q Consensus       463 ~  463 (488)
                      .
T Consensus       532 a  532 (596)
T d1w6sa_         532 A  532 (596)
T ss_dssp             E
T ss_pred             E
Confidence            3

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=97.77  E-value=0.0088  Score=54.79  Aligned_cols=78  Identities=10%  Similarity=0.045  Sum_probs=53.2

Q ss_pred             CeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccccccccCCcce--EEeecCCCceE
Q psy14511        385 CSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKARQVGSGSS--LEFAILKQPVS  462 (488)
Q Consensus       385 ~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~~~~~~~v~~--~~~s~~~~~~~  462 (488)
                      |.+.-||+.+++.+-+.+... +...=..+-.+.++++|+.||.++.+|.++++.+-.......+..  +.|..+|+...
T Consensus       457 G~l~AiD~~tGk~~W~~~~~~-p~~gg~lstagglVF~G~~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~GkQYv  535 (573)
T d1kb0a2         457 GRLLAWDPVAQKAAWSVEHVS-PWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYV  535 (573)
T ss_dssp             EEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred             ccEEEeCCCCCceEeeecCCC-CCCCceEEEcCCEEEEECCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCEEEE
Confidence            468888999998887765432 222222334678888999999999999999999855443333322  56677887543


Q ss_pred             E
Q psy14511        463 L  463 (488)
Q Consensus       463 ~  463 (488)
                      .
T Consensus       536 ~  536 (573)
T d1kb0a2         536 S  536 (573)
T ss_dssp             E
T ss_pred             E
Confidence            3

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.76  E-value=0.0064  Score=49.27  Aligned_cols=239  Identities=8%  Similarity=-0.038  Sum_probs=140.3

Q ss_pred             EEEEECCCeEEEEECCCCce-----EEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccc
Q psy14511        211 TLAVALDTSVYTWNTKTNKT-----QLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMH  285 (488)
Q Consensus       211 ~~~~~~d~~v~iw~~~~~~~-----~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~  285 (488)
                      ++..+..+.|+-.+++....     ......   +...+..++|.+..+.++.+....+.|+..++........+.....
T Consensus         3 fLl~s~~~~I~~~~ld~~~~~~~~~~~~~~~---~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~~v~~~~~~   79 (263)
T d1npea_           3 HLLFAQTGKIERLPLERNTMKKTEAKAFLHI---PAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLG   79 (263)
T ss_dssp             EEEEEEEEEEEEEEESSSCBCGGGCEEEEEE---EEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCC
T ss_pred             EEEEeCCCeEEEEECCCcccccccccccccc---CCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcEEEEEeccc
Confidence            44455556777777654331     111222   3345778999998888888756778898888876555444443334


Q ss_pred             cEEEEEec--CCEEE-EeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-c-Ce--EEEEECCCCCC
Q psy14511        286 QVIAMCWN--GNLLS-CGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-N-NT--VKIWDFRQLDA  358 (488)
Q Consensus       286 ~v~~~~~~--~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d-~~--i~iwd~~~~~~  358 (488)
                      .+..+++|  ++.|+ +-...+.|.+.++.... ........-..+..++++|...++.... . +.  |.--++.....
T Consensus        80 ~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~-~~~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~  158 (263)
T d1npea_          80 SPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ-RRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR  158 (263)
T ss_dssp             CEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC
T ss_pred             cccEEEEeccCCeEEEeccCCCEEEEEecCCce-EEEEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCc
Confidence            56666664  55554 55567899999987643 2223333335688999999877776554 2 33  44445543322


Q ss_pred             Cccc----cee-eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEe
Q psy14511        359 KRPL----GLI-VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWN  433 (488)
Q Consensus       359 ~~~~----~~~-~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~  433 (488)
                      ....    ... .-++.+.++.|+.+ ....+.|...++........+.+.. ...++++. ++....+-...+.|...|
T Consensus       159 ~~i~~~~~~~P~glaiD~~~~~lYw~-d~~~~~I~~~~~~g~~~~~v~~~~~-~P~~lav~-~~~lYwtd~~~~~I~~~~  235 (263)
T d1npea_         159 RILAQDNLGLPNGLTFDAFSSQLCWV-DAGTHRAECLNPAQPGRRKVLEGLQ-YPFAVTSY-GKNLYYTDWKTNSVIAMD  235 (263)
T ss_dssp             EEEECTTCSCEEEEEEETTTTEEEEE-ETTTTEEEEEETTEEEEEEEEECCC-SEEEEEEE-TTEEEEEETTTTEEEEEE
T ss_pred             eeeeeecccccceEEEeecCcEEEEE-eCCCCEEEEEECCCCCeEEEECCCC-CcEEEEEE-CCEEEEEECCCCEEEEEE
Confidence            1111    111 11677777777664 4557889999987554443444333 34577774 333444444668888889


Q ss_pred             cCCCCccccc--cccCCcceEEeec
Q psy14511        434 CFPRDKKRKA--RQVGSGSSLEFAI  456 (488)
Q Consensus       434 ~~~~~~~~~~--~~~~~v~~~~~s~  456 (488)
                      ..+++.....  ........++..+
T Consensus       236 ~~~g~~~~~~~~~~~~~~~gi~v~~  260 (263)
T d1npea_         236 LAISKEMDTFHPHKQTRLYGITIAL  260 (263)
T ss_dssp             TTTTEEEEEECCSSCCCCCCEEEEC
T ss_pred             CCCCccceEECCCCCCCcceEEEeC
Confidence            8887765322  2223344555444

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=0.0076  Score=48.92  Aligned_cols=224  Identities=9%  Similarity=-0.008  Sum_probs=133.8

Q ss_pred             EEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcce----eeeeecccccc
Q psy14511        211 TLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEER----LIQKLRTHMHQ  286 (488)
Q Consensus       211 ~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~----~~~~~~~~~~~  286 (488)
                      ++..+....|+..++.+.....+..    ....+..++|++..+.++.+-...+.|.-.++....    ....+......
T Consensus         3 fLl~s~~~~I~~~~l~~~~~~~~~~----~~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~   78 (266)
T d1ijqa1           3 YLFFTNRHEVRKMTLDRSEYTSLIP----NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQA   78 (266)
T ss_dssp             EEEEECBSSEEEEETTSCCCEEEEC----SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSC
T ss_pred             EEEEECCCeEEEEECCCCcceeeeC----CCCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCCC
Confidence            4455556679999998877655543    445678999999988888874566777766664321    11112222233


Q ss_pred             EEEEEe---cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe--c-CeEEEEECCCCCCCc
Q psy14511        287 VIAMCW---NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--N-NTVKIWDFRQLDAKR  360 (488)
Q Consensus       287 v~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--d-~~i~iwd~~~~~~~~  360 (488)
                      +..+++   .+++..+-...+.|.+.++.... ..............++++|...+|....  . +.|.-.++.......
T Consensus        79 p~glAvD~~~~~lY~~d~~~~~I~v~~~~g~~-~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~~~~  157 (266)
T d1ijqa1          79 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK-RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS  157 (266)
T ss_dssp             CCEEEEETTTTEEEEEETTTTEEEEEETTSSS-EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEE
T ss_pred             cceEEEeeccceEEEEecCCCEEEeEecCCce-EEEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCceec
Confidence            444555   34455555566889999988643 3333444455678999999666665544  2 567777776432221


Q ss_pred             ccce----e-eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeec--cccEEEEEEcCCCCEEEEEeCCCcEEEEe
Q psy14511        361 PLGL----I-VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIH--QERILSAVLSPDQTCVAAASADETISIWN  433 (488)
Q Consensus       361 ~~~~----~-~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~t~~~dg~v~iw~  433 (488)
                      ....    . --++.+.++.|+.+ ....+.|...++............  .....++++. ++....+-..++.|...+
T Consensus       158 l~~~~~~~p~gl~iD~~~~~lYw~-d~~~~~I~~~~~dG~~~~~~~~~~~~~~~p~~lav~-~~~ly~td~~~~~I~~~~  235 (266)
T d1ijqa1         158 LVTENIQWPNGITLDLLSGRLYWV-DSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSAN  235 (266)
T ss_dssp             EECSSCSCEEEEEEETTTTEEEEE-ETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEE
T ss_pred             ccccccceeeEEEeeccccEEEEe-cCCcCEEEEEECCCCCEEEEEeCCCcccccEEEEEE-CCEEEEEECCCCeEEEEE
Confidence            1111    1 11677777777775 456788998898654433333322  2345677775 334444445678888888


Q ss_pred             cCCCCccc
Q psy14511        434 CFPRDKKR  441 (488)
Q Consensus       434 ~~~~~~~~  441 (488)
                      ..+++...
T Consensus       236 ~~~g~~~~  243 (266)
T d1ijqa1         236 RLTGSDVN  243 (266)
T ss_dssp             TTTCCCCE
T ss_pred             CCCCcceE
Confidence            77776553

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.66  E-value=0.009  Score=48.00  Aligned_cols=242  Identities=13%  Similarity=0.098  Sum_probs=133.3

Q ss_pred             CccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCccccccc-
Q psy14511          1 MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCH-   79 (488)
Q Consensus         1 ~~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h-   79 (488)
                      |.|+.+.||.=+ ..++.|+|+++.+.+... . -...|.-=.|- +.+.|+-..+..|+-|+++....  +...+.-| 
T Consensus        70 MhP~~~IiALra-g~~LQiFnletK~klks~-~-~~e~VvfWkWi-s~~~L~lVT~taVYHW~~~g~s~--P~k~fdR~~  143 (327)
T d1utca2          70 MNPASKVIALKA-GKTLQIFNIEMKSKMKAH-T-MTDDVTFWKWI-SLNTVALVTDNAVYHWSMEGESQ--PVKMFDRHS  143 (327)
T ss_dssp             ECSSSSEEEEEE-TTEEEEEETTTTEEEEEE-E-CSSCCCEEEES-SSSEEEEECSSEEEEEESSSSCC--CEEEEECCG
T ss_pred             cCCCCcEEEEec-CCeEEEEehhHhhhhceE-E-cCCCcEEEEec-CCCEEEEEcCCceEEEcccCCCC--chhhhhhcc
Confidence            456777888655 668999999988755332 1 22356555665 45678888889999999965332  33223223 


Q ss_pred             ---ccceeEEEEecCCCeEEeeeCCc----ccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeee
Q psy14511         80 ---LSAVKAIAWCPWEPTLLATGGGI----CDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFE  152 (488)
Q Consensus        80 ---~~~v~~l~~~~~~~~l~~~~~~~----~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (488)
                         ...|..-.-+++.+.++.+|-..    -.|.+.+|..+.+. .+.+.++........+.- .......+.+...+..
T Consensus       144 ~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~~-sQ~ieGhaa~F~~~~~~g-~~~~~~lf~fa~r~~~  221 (327)
T d1utca2         144 SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEG-NAEESTLFCFAVRGQA  221 (327)
T ss_dssp             GGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE-EEEECCSEEEEEEECCTT-CSSCEEEEEEEEEETT
T ss_pred             cccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccCc-CccccceeeeeEEEEcCC-CCCCceEEEEEECCCC
Confidence               24677777889999888776422    24678889876543 344444422111111111 1112223333322211


Q ss_pred             ccccceeccccccccceeeeccccccccccc---CCCceeecCCCccccceeeeeee-CCCcEEEEECCCeEEEEECCCC
Q psy14511        153 IDRKKVLNQSKRTVSPTQFLRTLGKLPRKVK---AKPERILEAPSIINDFYTSGLDW-GYHDTLAVALDTSVYTWNTKTN  228 (488)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~v~iw~~~~~  228 (488)
                      .....++              ++.......+   .....+...++...+|.+..--- ..+-++..+.-|.+.+||++++
T Consensus       222 ~~kLhIi--------------Eig~~~~g~~~f~kk~vdi~fppea~~DFPvamqvs~kygiiyviTK~G~i~lyDleTg  287 (327)
T d1utca2         222 GGKLHII--------------EVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETG  287 (327)
T ss_dssp             EEEEEEE--------------ECSCCCTTCCCCCCEEEECCCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTC
T ss_pred             CcEEEEE--------------EcCCCccCCCCCcceeEEEECCccccCCcEEEEEeeccCCEEEEEecCcEEEEEEcccc
Confidence            0001111              1111111111   11123334455566666653322 3467888899999999999999


Q ss_pred             ceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEE
Q psy14511        229 KTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDL  268 (488)
Q Consensus       229 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i  268 (488)
                      .++..-+.   ....|...+-..+..-++.. ..+|.|..
T Consensus       288 t~i~~nRI---s~~~iF~~a~~~~~~Gi~~V-Nr~GqVl~  323 (327)
T d1utca2         288 TCIYMNRI---SGETIFVTAPHEATAGIIGV-NRKGQVLS  323 (327)
T ss_dssp             CEEEEEEC---CSSCEEEEEEETTTTEEEEE-ETTSEEEE
T ss_pred             cEEEEeec---CCCceEEeccCCCCceEEEE-CCCCeEEE
Confidence            98887776   45556555544444444444 46666543

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=97.64  E-value=0.0094  Score=54.47  Aligned_cols=80  Identities=14%  Similarity=0.145  Sum_probs=46.4

Q ss_pred             CcEEEEECCcceeeeeeccccccE-EEEEecCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCc-EEE
Q psy14511        264 EYIDLWHEQEERLIQKLRTHMHQV-IAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGR-YLA  341 (488)
Q Consensus       264 ~~i~i~d~~~~~~~~~~~~~~~~v-~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~  341 (488)
                      |.|.-+|+.+++.+.+........ -.+...+.++++|+.||.++.+|.++++..-..-......-.-+.|..||+ |++
T Consensus       444 G~l~AiD~~TG~~~W~~~~~~~~~~g~l~TagglVf~G~~dg~l~A~Da~tGe~lW~~~l~~~~~a~P~ty~~dGkqYi~  523 (571)
T d2ad6a1         444 GQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYIG  523 (571)
T ss_dssp             EEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred             ccEEEeccCCCceeeEcCCCCCCCcceeEecCCEEEEECCCCeEEEEECCCCcEEEEEECCCCceecceEEEECCEEEEE
Confidence            356667777776665543211111 123335778888999999999999998754433332221112245566785 554


Q ss_pred             EE
Q psy14511        342 SG  343 (488)
Q Consensus       342 ~~  343 (488)
                      +.
T Consensus       524 v~  525 (571)
T d2ad6a1         524 SM  525 (571)
T ss_dssp             EE
T ss_pred             EE
Confidence            43

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=97.63  E-value=0.014  Score=49.62  Aligned_cols=222  Identities=12%  Similarity=0.075  Sum_probs=137.0

Q ss_pred             EEEEECCCeEEEEECCCCceEEEEecCCC------------------------------------CCCce--EEEEEcC-
Q psy14511        211 TLAVALDTSVYTWNTKTNKTQLLVEYPTY------------------------------------DNAYI--SCVAWKP-  251 (488)
Q Consensus       211 ~~~~~~d~~v~iw~~~~~~~~~~~~~~~~------------------------------------~~~~i--~~~~~~~-  251 (488)
                      +.+++..|+|+++-+.+++....+..-..                                    ..+..  ..+.+.. 
T Consensus        16 f~SgG~sG~v~v~G~PSmR~l~~ipvF~~~~~~G~G~~~es~~il~~~~~~~t~~~l~~~g~~~~~~GD~HHP~~S~TdG   95 (459)
T d1fwxa2          16 FWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTEG   95 (459)
T ss_dssp             EECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCC--------------CCCCCBCCEEEEEETT
T ss_pred             EeeCCccceEEEEecCCcceEEEeeeecCCCCcccCcchhHHHHhhcccChhhhhhhhccCcccccCCCcCCCcccccCC
Confidence            56677899999999998887665432110                                    00011  1344433 


Q ss_pred             --CCCeEEEEeCCCCcEEEEECCcceeeeeecc-ccccEEEEEe----cCCEEEEeecCC------------------eE
Q psy14511        252 --RTTDLAVTNTCTEYIDLWHEQEERLIQKLRT-HMHQVIAMCW----NGNLLSCGTIGG------------------NI  306 (488)
Q Consensus       252 --~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~-~~~~v~~~~~----~~~~l~~~~~dg------------------~i  306 (488)
                        ||+++++....+.+|.+.|+++.+..+.++. ....+..++.    +-.+++.+++..                  .+
T Consensus        96 tyDGrylFVNDkan~RVAvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y~~~~  175 (459)
T d1fwxa2          96 KYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVF  175 (459)
T ss_dssp             EEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-EEEEE
T ss_pred             ccceeEEEEEcCCCceEEEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCccccchhhcceEE
Confidence              7899999877899999999999887554432 2334455554    345666655532                  35


Q ss_pred             EEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-c--------------------------------------Ce
Q psy14511        307 LHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-N--------------------------------------NT  347 (488)
Q Consensus       307 ~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d--------------------------------------~~  347 (488)
                      .+.|..+.+...+....  .....+.++|+|+++++.+ +                                      +.
T Consensus       176 t~ID~~tm~V~~QV~V~--g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~Gk~~eing  253 (459)
T d1fwxa2         176 TAVDADKWEVAWQVLVS--GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNG  253 (459)
T ss_dssp             EEEETTTTEEEEEEEES--SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETT
T ss_pred             EEEecCCceEEEEeeeC--CChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhcCCcEEeCC
Confidence            66787765432222222  2355789999999998875 2                                      11


Q ss_pred             EEEEECCCCCCCccccee-------eeeecCCCCEEEEEccCCCCeEEEEeCCCccee------------EEEeeccccE
Q psy14511        348 VKIWDFRQLDAKRPLGLI-------VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLI------------EELKIHQERI  408 (488)
Q Consensus       348 i~iwd~~~~~~~~~~~~~-------~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~------------~~~~~~~~~v  408 (488)
                      +.+-|.++......+...       -...+|||++++++ |..+.++.++|+++...+            .+.+ ..-.-
T Consensus       254 V~VVD~~~~~~~~v~~yIPVpKsPHGV~vSPDGKyi~Va-GKLs~tVSViD~~Ki~~~~~~~~~~~~~~~~e~e-lglgP  331 (459)
T d1fwxa2         254 VKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVA-GKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGP  331 (459)
T ss_dssp             EEEEECSGG--CSSEEEEEEESSCCCEEECTTSSEEEEE-CTTSSBEEEEEGGGHHHHHHSCC-GGGGEEECCB-CCSCE
T ss_pred             ceeecccccCCcceeEEEecCCCCCceEECCCCCEEEEe-CCcCCcEEEEEehhhhhhhcccCCccccEEeecc-cCcCc
Confidence            233443321111111111       11899999999998 788999999999642111            1111 12234


Q ss_pred             EEEEEcCCCCEEEEEeCCCcEEEEecCC
Q psy14511        409 LSAVLSPDQTCVAAASADETISIWNCFP  436 (488)
Q Consensus       409 ~~~~~s~~~~~l~t~~~dg~v~iw~~~~  436 (488)
                      ..-+|..+|....|.--|..|.-|++..
T Consensus       332 Lht~fd~~g~aytslfids~v~kw~~~~  359 (459)
T d1fwxa2         332 LHTAFDGRGNAYTSLFLDSQVVKWNIED  359 (459)
T ss_dssp             EEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred             cccccCCCceEEEEeeccceEEEEecch
Confidence            6678888887666677999999999853

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.61  E-value=0.011  Score=47.92  Aligned_cols=229  Identities=9%  Similarity=-0.036  Sum_probs=130.3

Q ss_pred             EEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec--CCeEEEEeccccCcCCCccc-cccccccee
Q psy14511          8 LSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAKRPQVN-NQCHLSAVK   84 (488)
Q Consensus         8 la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~--d~~i~vwd~~~~~~~~~~~~-~~~h~~~v~   84 (488)
                      |+.+. ...|+-.++.+.. ... +......+.++.|.+..+.|.-..  ++.|.--+++.......... .......+.
T Consensus         4 Ll~s~-~~~I~~~~l~~~~-~~~-~~~~~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~p~   80 (266)
T d1ijqa1           4 LFFTN-RHEVRKMTLDRSE-YTS-LIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD   80 (266)
T ss_dssp             EEEEC-BSSEEEEETTSCC-CEE-EECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred             EEEEC-CCeEEEEECCCCc-cee-eeCCCCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCCCcc
Confidence            44333 3468889998765 323 334455678999999888777664  67777766653221111111 122234567


Q ss_pred             EEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccc
Q psy14511         85 AIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKR  164 (488)
Q Consensus        85 ~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (488)
                      .|++.+.+..|..+...  .+.|.+.++..................+                                 
T Consensus        81 glAvD~~~~~lY~~d~~--~~~I~v~~~~g~~~~~~~~~~~~~P~~l---------------------------------  125 (266)
T d1ijqa1          81 GLAVDWIHSNIYWTDSV--LGTVSVADTKGVKRKTLFRENGSKPRAI---------------------------------  125 (266)
T ss_dssp             EEEEETTTTEEEEEETT--TTEEEEEETTSSSEEEEEECTTCCEEEE---------------------------------
T ss_pred             eEEEeeccceEEEEecC--CCEEEeEecCCceEEEEEcCCCCCcceE---------------------------------
Confidence            88888878788887664  7889999986554332222111100000                                 


Q ss_pred             cccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEE--CCCeEEEEECCCCceEEEEecCCCCCC
Q psy14511        165 TVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVA--LDTSVYTWNTKTNKTQLLVEYPTYDNA  242 (488)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~v~iw~~~~~~~~~~~~~~~~~~~  242 (488)
                                                            .++...+.++...  ..+.|...++...........   .-.
T Consensus       126 --------------------------------------~vd~~~g~ly~~~~~~~~~I~r~~~dGs~~~~l~~~---~~~  164 (266)
T d1ijqa1         126 --------------------------------------VVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE---NIQ  164 (266)
T ss_dssp             --------------------------------------EEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECS---SCS
T ss_pred             --------------------------------------EEEcccCeEEEeccCCCcceeEeccCCCceeccccc---ccc
Confidence                                                  0111122233322  334566666655444433321   335


Q ss_pred             ceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeee--ccccccEEEEEecCCEEEEe-ecCCeEEEEECcCCC
Q psy14511        243 YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKL--RTHMHQVIAMCWNGNLLSCG-TIGGNILHYDVRTHS  315 (488)
Q Consensus       243 ~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~--~~~~~~v~~~~~~~~~l~~~-~~dg~i~i~d~~~~~  315 (488)
                      ....+++.+.++.|+.+-...+.|...++.........  .........+++++..|... ..++.|+..+..++.
T Consensus       165 ~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG~~~~~~~~~~~~~~~p~~lav~~~~ly~td~~~~~I~~~~~~~g~  240 (266)
T d1ijqa1         165 WPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGS  240 (266)
T ss_dssp             CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred             eeeEEEeeccccEEEEecCCcCEEEEEECCCCCEEEEEeCCCcccccEEEEEECCEEEEEECCCCeEEEEECCCCc
Confidence            67899999998888888567789999898764332222  22234466788865555554 466788888877654

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.39  E-value=0.037  Score=48.49  Aligned_cols=108  Identities=13%  Similarity=0.167  Sum_probs=64.4

Q ss_pred             ccCCceEEEee-cC----CeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-----------------CCeE
Q psy14511          2 CWNGNLLSCGT-IG----GNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-----------------NNTV   59 (488)
Q Consensus         2 ~~dg~~la~g~-~d----g~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-----------------d~~i   59 (488)
                      ++||+++|.+- .+    ..++++|+.+++.+...+..-.  ...++|++|++.|....                 ...|
T Consensus       133 Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i~~~~--~~~~~W~~D~~~~~Y~~~~~~~~~~~~~~~~~~~~~~v  210 (430)
T d1qfma1         133 SEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVK--FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKL  210 (430)
T ss_dssp             CTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEEC--SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEE
T ss_pred             cCCCCEEEEEeccccCchheeEEeccCcceeccccccccc--ccceEEcCCCCEEEEEEeccccCcccccccccCCcceE
Confidence            56899998442 23    3799999999986654443221  24688999999776432                 1367


Q ss_pred             EEEeccccCcCC-CcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEe
Q psy14511         60 KIWDFRQLDAKR-PQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWN  111 (488)
Q Consensus        60 ~vwd~~~~~~~~-~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd  111 (488)
                      ..|.+.+..... .+.........+..+..++++++++.......+....+|-
T Consensus       211 ~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~~~~  263 (430)
T d1qfma1         211 YYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWY  263 (430)
T ss_dssp             EEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEE
T ss_pred             EEEECCCCccccccccccccCCceEEeeeccCCcceeeEEeeccCCccEEEEE
Confidence            888876643222 1211111223466777899999887654321234444443

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=97.28  E-value=0.062  Score=48.94  Aligned_cols=77  Identities=17%  Similarity=0.201  Sum_probs=47.6

Q ss_pred             cEEEEECCcceeeeeecccccc-EEEEEecCCEEEEeecCCeEEEEECcCCCccceeeec---CCccEEEEEEccCCc-E
Q psy14511        265 YIDLWHEQEERLIQKLRTHMHQ-VIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITR---EGDVVCGLKWSPNGR-Y  339 (488)
Q Consensus       265 ~i~i~d~~~~~~~~~~~~~~~~-v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~---~~~~i~~~~~s~~~~-~  339 (488)
                      .+.-||+.+++.+.+.+..... -..++..+.++++|+.||.++.+|.++++.+-..-..   +..+   +.|..+|+ |
T Consensus       458 ~l~AiD~~tGk~~W~~~~~~p~~gg~lstagglVF~G~~dg~l~A~Da~TGe~LW~~~~~~~~~~~P---~ty~~~GkQY  534 (573)
T d1kb0a2         458 RLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAP---STYMVDGRQY  534 (573)
T ss_dssp             EEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCC---EEEEETTEEE
T ss_pred             cEEEeCCCCCceEeeecCCCCCCCceEEEcCCEEEEECCCCeEEEEECCCCcEeEEEECCCCccccC---EEEEECCEEE
Confidence            5667788887777666432211 1234557888989999999999999998754333222   1222   44555775 4


Q ss_pred             EEEEe
Q psy14511        340 LASGS  344 (488)
Q Consensus       340 l~~~~  344 (488)
                      ++..+
T Consensus       535 v~v~~  539 (573)
T d1kb0a2         535 VSVAV  539 (573)
T ss_dssp             EEEEE
T ss_pred             EEEEe
Confidence            54443

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.26  E-value=0.052  Score=47.49  Aligned_cols=63  Identities=16%  Similarity=0.170  Sum_probs=41.8

Q ss_pred             ccCceEEEEEEccCCcEEEEec------CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeC
Q psy14511         34 REGDVVCGLKWSPNGRYLASGS------NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGG  100 (488)
Q Consensus        34 ~h~~~V~~l~~sp~g~~las~~------d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~  100 (488)
                      ++.-.+...++|||++++|.+-      ...|++.|+.+++.....  +.  ......++|.+|++.++.+..
T Consensus       122 ~~~~~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~--i~--~~~~~~~~W~~D~~~~~Y~~~  190 (430)
T d1qfma1         122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDV--LE--RVKFSCMAWTHDGKGMFYNAY  190 (430)
T ss_dssp             SSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEE--EE--EECSCCEEECTTSSEEEEEEC
T ss_pred             cccceecceEecCCCCEEEEEeccccCchheeEEeccCcceecccc--cc--cccccceEEcCCCCEEEEEEe
Confidence            4444566778999999998652      258999999986532211  11  112356889999988877653

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.07  E-value=0.11  Score=47.54  Aligned_cols=80  Identities=16%  Similarity=0.134  Sum_probs=43.9

Q ss_pred             CcEEEEECCcceeeeeeccccccE-EEEEecCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCc-EEE
Q psy14511        264 EYIDLWHEQEERLIQKLRTHMHQV-IAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGR-YLA  341 (488)
Q Consensus       264 ~~i~i~d~~~~~~~~~~~~~~~~v-~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~  341 (488)
                      |.|.-||+.+++.+.......... -.+.-.+.+++.|+.||.++.+|.++++.+-..-......-.=+.|..+|+ |++
T Consensus       453 G~l~A~D~~TG~~~W~~~~~~~~~gg~lsTagglVF~G~~Dg~l~A~Da~TGe~LW~~~~~~~~~a~P~tY~~dGkQYva  532 (596)
T d1w6sa_         453 GQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQYVA  532 (596)
T ss_dssp             EEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred             ceEEEEeCCCCceecccCCCCCCccceeEecCCEEEEECCCCeEEEEECCCCcEeeEEECCCCcccCCeEEEECCEEEEE
Confidence            456667777766655432211100 112235778888999999999999998654333222111111134555775 555


Q ss_pred             EE
Q psy14511        342 SG  343 (488)
Q Consensus       342 ~~  343 (488)
                      ..
T Consensus       533 v~  534 (596)
T d1w6sa_         533 IY  534 (596)
T ss_dssp             EE
T ss_pred             EE
Confidence            43

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=96.95  E-value=0.13  Score=46.57  Aligned_cols=81  Identities=20%  Similarity=0.245  Sum_probs=49.0

Q ss_pred             CcEEEEECCcceeeeeeccccccE-EEEEecCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCc-EEE
Q psy14511        264 EYIDLWHEQEERLIQKLRTHMHQV-IAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGR-YLA  341 (488)
Q Consensus       264 ~~i~i~d~~~~~~~~~~~~~~~~v-~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~  341 (488)
                      |.+.-+|+.+++.+.......... -.++-.+.++++|+.||.++.+|.++++.+-..-......-.-+.+..+|+ ||+
T Consensus       438 G~l~A~D~~tGk~~W~~~~~~~~~gg~l~TagglVF~G~~dg~l~A~Da~tGe~LW~~~l~~~~~~~P~ty~~dGkqyv~  517 (560)
T d1kv9a2         438 GALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQYVA  517 (560)
T ss_dssp             EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred             cceEEEeCCCCeEeeeccCCCCCCCceeEECCCEEEEECCCCcEEEEECCCCcEeEEEECCCCccccCEEEEECCEEEEE
Confidence            467788888888776654321111 134446788889999999999999998754333222211111244556775 555


Q ss_pred             EEe
Q psy14511        342 SGS  344 (488)
Q Consensus       342 ~~~  344 (488)
                      +..
T Consensus       518 v~a  520 (560)
T d1kv9a2         518 IMA  520 (560)
T ss_dssp             EEE
T ss_pred             EEe
Confidence            443

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.30  E-value=0.38  Score=43.66  Aligned_cols=79  Identities=13%  Similarity=0.074  Sum_probs=55.6

Q ss_pred             CCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccccccccCCc--ceEEeecCCC
Q psy14511        382 KQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKARQVGSG--SSLEFAILKQ  459 (488)
Q Consensus       382 ~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~~~~~~~v--~~~~~s~~~~  459 (488)
                      ...|.+.-+|+.+++.+-+...+. ++..-..+..+.++++|+.||.++-+|.++++.+-.......+  .=+.|..+|+
T Consensus       463 ~~~G~l~AiD~~TG~i~W~~~~~~-p~~~g~lstagglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~G~  541 (582)
T d1flga_         463 DHVGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGE  541 (582)
T ss_dssp             SCSEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred             CCCCeEEEEcCCCCcEEeecCCCC-CCccceeEEcCCeEEEeCCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCE
Confidence            345788889999999888776442 2332233457778889999999999999999998443333332  2367778886


Q ss_pred             ce
Q psy14511        460 PV  461 (488)
Q Consensus       460 ~~  461 (488)
                      ..
T Consensus       542 qY  543 (582)
T d1flga_         542 QY  543 (582)
T ss_dssp             EE
T ss_pred             EE
Confidence            54

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.17  E-value=0.44  Score=43.18  Aligned_cols=80  Identities=19%  Similarity=0.295  Sum_probs=49.4

Q ss_pred             CcEEEEECCcceeeeeeccccccEE-EEEecCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCc-EEE
Q psy14511        264 EYIDLWHEQEERLIQKLRTHMHQVI-AMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGR-YLA  341 (488)
Q Consensus       264 ~~i~i~d~~~~~~~~~~~~~~~~v~-~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~  341 (488)
                      |.+.-+|+.+++.......+..... .++..+.++++|+.||.++.+|.++++.+-..-......-.-+.+..+|+ |++
T Consensus       466 G~l~AiD~~TG~i~W~~~~~~p~~~g~lstagglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~G~qYv~  545 (582)
T d1flga_         466 GSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLG  545 (582)
T ss_dssp             EEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred             CeEEEEcCCCCcEEeecCCCCCCccceeEEcCCeEEEeCCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCEEEEE
Confidence            5677778888777766653322111 23446788889999999999999998754433332221111256667885 555


Q ss_pred             EE
Q psy14511        342 SG  343 (488)
Q Consensus       342 ~~  343 (488)
                      ..
T Consensus       546 i~  547 (582)
T d1flga_         546 VT  547 (582)
T ss_dssp             EE
T ss_pred             EE
Confidence            44

>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Thermostable phytase (3-phytase)
family: Thermostable phytase (3-phytase)
domain: Thermostable phytase (3-phytase)
species: Bacillus amyloliquefaciens [TaxId: 1390]

Probab=95.52  E-value=0.53  Score=39.08  Aligned_cols=181  Identities=14%  Similarity=0.168  Sum_probs=99.1

Q ss_pred             CCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe------cC--CEEEEeecC----CeEEEEECcCCCccc
Q psy14511        251 PRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW------NG--NLLSCGTIG----GNILHYDVRTHSDYP  318 (488)
Q Consensus       251 ~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~------~~--~~l~~~~~d----g~i~i~d~~~~~~~~  318 (488)
                      |+...++.+ ...+-|.+||++ |+.+..+..  +.+..+..      ++  ..++.++..    ..|.+|.+.......
T Consensus        38 p~~SlI~gT-dK~~Gl~vYdL~-G~~l~~~~~--Gr~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~id~~~~~l  113 (353)
T d1h6la_          38 PQNSKLITT-NKKSGLAVYSLE-GKMLHSYHT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTL  113 (353)
T ss_dssp             GGGCEEEEE-ETTSCCEEEETT-CCEEEECCS--SCEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEETTTTEE
T ss_pred             cCccEEEEE-cCcCCEEEEcCC-CcEEEeccc--CCcCccccccccccCCcceEEEEEeCCcCcceeEEEEEecCccccc
Confidence            344566666 777779999996 666666642  34444433      22  234455422    367788776432222


Q ss_pred             eeeec-------CCccEEEEEE--ccC-CcEEEEEe--cCeEEEEECCCCCCCc----cccee-------eeeecCCCCE
Q psy14511        319 TAITR-------EGDVVCGLKW--SPN-GRYLASGS--NNTVKIWDFRQLDAKR----PLGLI-------VPKLKREGRE  375 (488)
Q Consensus       319 ~~~~~-------~~~~i~~~~~--s~~-~~~l~~~~--d~~i~iwd~~~~~~~~----~~~~~-------~~~~~~~~~~  375 (488)
                      ..+..       ....++.+++  +|. |.+.+...  +|.+..|.+.......    .++.+       -+.+......
T Consensus       114 ~~~~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f~~~~q~EGCVvDde~~~  193 (353)
T d1h6la_         114 QSITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAFKMNSQTEGMAADDEYGS  193 (353)
T ss_dssp             EECSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEEECSSCEEEEEEETTTTE
T ss_pred             ccccccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeeccCCCCccceEEEeCCCCc
Confidence            22221       1123667776  654 55545444  3999888774322111    11111       2267777778


Q ss_pred             EEEEccCCCCeEEEEeCCC--c---ceeEEEee--ccccEEEEEEc--CCCC-EEEE-EeCCCcEEEEecCCC
Q psy14511        376 LVTSHGKQDCSLKMWEYPR--L---HLIEELKI--HQERILSAVLS--PDQT-CVAA-ASADETISIWNCFPR  437 (488)
Q Consensus       376 l~~~~g~~~~~i~i~d~~~--~---~~~~~~~~--~~~~v~~~~~s--~~~~-~l~t-~~~dg~v~iw~~~~~  437 (488)
                      |++  +.++..+..++..-  .   ..+....+  ....+..|+.-  +++. +|++ .-.+++..+||..+.
T Consensus       194 Lyi--sEE~~Giw~~~a~~~~~~~~~~i~~~~g~~l~~D~EGlaiy~~~~~~GylivSsQG~n~f~vydr~~~  264 (353)
T d1h6la_         194 LYI--AEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTPDIEGLTIYYAADGKGYLLASSQGNSSYAIYERQGQ  264 (353)
T ss_dssp             EEE--EETTTEEEEEESSTTSCSCCEEEEECSSSSCCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTT
T ss_pred             EEE--ecCccceEEEEeccCCCccceeeecccCccccCCccccEEEEcCCCCeEEEEEcCCCCeEEEEecCCC
Confidence            888  56666676666531  1   22222222  24567777643  3333 5544 446789999998764

>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Kelch motif
family: Kelch motif
domain: Kelch-like ECH-associated protein 1, KEAP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.91  E-value=0.67  Score=37.23  Aligned_cols=213  Identities=10%  Similarity=0.033  Sum_probs=98.3

Q ss_pred             CeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCC---------CCcEEEEECCcceeee--eecccccc
Q psy14511        218 TSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTC---------TEYIDLWHEQEERLIQ--KLRTHMHQ  286 (488)
Q Consensus       218 ~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~---------~~~i~i~d~~~~~~~~--~~~~~~~~  286 (488)
                      ..+.+||..+++....-.++. ....-..+.+  +++.++.+ +.         -..+.+||..+.+...  .+......
T Consensus        19 ~~~~~yd~~t~~W~~~~~~p~-~R~~~~~~~~--~~~iyv~G-G~~~~~~~~~~~~~~~~yd~~~~~w~~~~~~p~~r~~   94 (288)
T d1zgka1          19 SYLEAYNPSNGTWLRLADLQV-PRSGLAGCVV--GGLLYAVG-GRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNR   94 (288)
T ss_dssp             CCEEEEETTTTEEEECCCCSS-CCBSCEEEEE--TTEEEEEC-CEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBT
T ss_pred             ceEEEEECCCCeEEECCCCCC-ccceeEEEEE--CCEEEEEe-CcccCCCCccccchhhhcccccccccccccccceecc
Confidence            468899999998766655543 2323233332  44455554 32         2356778876643322  11111112


Q ss_pred             EEEEEecCCEEEEeecCCe-----EEEEECcCCCccceee-ecCCccEEEEEEccCCcEEEEEe-c-----CeEEEEECC
Q psy14511        287 VIAMCWNGNLLSCGTIGGN-----ILHYDVRTHSDYPTAI-TREGDVVCGLKWSPNGRYLASGS-N-----NTVKIWDFR  354 (488)
Q Consensus       287 v~~~~~~~~~l~~~~~dg~-----i~i~d~~~~~~~~~~~-~~~~~~i~~~~~s~~~~~l~~~~-d-----~~i~iwd~~  354 (488)
                      -.+...+++.++.++.++.     ...+|..+..-..... ....... .+... +++.++.++ +     ..+..||..
T Consensus        95 ~~~~~~~~~i~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~-~~~~~-~~~~~~~GG~~~~~~~~~~~~~d~~  172 (288)
T d1zgka1          95 IGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGV-GVAVL-NRLLYAVGGFDGTNRLNSAECYYPE  172 (288)
T ss_dssp             CEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSC-EEEEE-TTEEEEECCBCSSCBCCCEEEEETT
T ss_pred             eeccccceeeEEecceecccccceeeeeccccCccccccccccccccc-eeeee-eecceEecCcccccccceEEEeecc
Confidence            2334447777777665543     3446655432100000 0001111 12222 444555544 2     557888876


Q ss_pred             CCCCCccc-----ceeeeeecCCCCEEEEEccCCC-----CeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEe
Q psy14511        355 QLDAKRPL-----GLIVPKLKREGRELVTSHGKQD-----CSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAAS  424 (488)
Q Consensus       355 ~~~~~~~~-----~~~~~~~~~~~~~l~~~~g~~~-----~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~  424 (488)
                      +.+....-     .........+++.++.  |+.+     .....+|..+.+....-.........-+...++++++.|+
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~i~i~--GG~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG  250 (288)
T d1zgka1         173 RNEWRMITAMNTIRSGAGVCVLHNCIYAA--GGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVHQGRIYVLGG  250 (288)
T ss_dssp             TTEEEECCCCSSCCBSCEEEEETTEEEEE--CCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECC
T ss_pred             ccccccccccccccccccccceeeeEEEe--cCccccccccceeeeeecceeeecccCccCcccceEEEEECCEEEEEec
Confidence            54321111     0001122233444444  3222     3567778776543322111111111111223778888877


Q ss_pred             CCC-----cEEEEecCCCC
Q psy14511        425 ADE-----TISIWNCFPRD  438 (488)
Q Consensus       425 ~dg-----~v~iw~~~~~~  438 (488)
                      .++     .+.+||+.+.+
T Consensus       251 ~~~~~~~~~v~~yd~~~~~  269 (288)
T d1zgka1         251 YDGHTFLDSVECYDPDTDT  269 (288)
T ss_dssp             BCSSCBCCEEEEEETTTTE
T ss_pred             CCCCeecceEEEEECCCCE
Confidence            654     36778887654

>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: Serum paraoxonase/arylesterase 1, PON1
domain: Serum paraoxonase/arylesterase 1, PON1
species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=94.57  E-value=0.078  Score=44.40  Aligned_cols=33  Identities=6%  Similarity=0.222  Sum_probs=28.2

Q ss_pred             CceEEEEEcCCCCeEEEEeCCCCcEEEEECCcc
Q psy14511        242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEE  274 (488)
Q Consensus       242 ~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~  274 (488)
                      ...+.++++|++++++++.+..+.|+.|++...
T Consensus       206 ~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~  238 (340)
T d1v04a_         206 DFANGINISPDGKYVYIAELLAHKIHVYEKHAN  238 (340)
T ss_dssp             SSEEEEEECTTSSEEEEEEGGGTEEEEEEECTT
T ss_pred             CccceeEECCCCCEEEEEeCCCCeEEEEEeCCC
Confidence            457899999999999988788899999988653

>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nucleoporin domain
family: Nucleoporin domain
domain: Nucleoporin NUP159
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.41  E-value=1.8  Score=36.16  Aligned_cols=112  Identities=17%  Similarity=0.148  Sum_probs=68.1

Q ss_pred             CceEEEEEcCCCCeEEEEeCCCCcEEEEECCcc---------eeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECc
Q psy14511        242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEE---------RLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVR  312 (488)
Q Consensus       242 ~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~---------~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~  312 (488)
                      ....-++.++...+++++ +.++ +.+.....-         ......+..-..|..++++++.++.. .++.+..++..
T Consensus        37 ~~~~LLAVsn~~GLl~aa-~~~~-l~V~~t~~l~~~~~~~~~~~~~~~~~~ip~v~~vafs~d~l~v~-~~~~l~~~~~~  113 (381)
T d1xipa_          37 ASLQNLDISNSKSLFVAA-SGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPDVIFVCFHGDQVLVS-TRNALYSLDLE  113 (381)
T ss_dssp             SCCBCEEEETTTTEEEEE-ETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTTEEEEEEETTEEEEE-ESSEEEEEESS
T ss_pred             cccceEEEeCCCCEEEEE-CCCE-EEEEEHHHHHHHhhccCCCCcceeccCCCCeEEEEeeCCEEEEE-eCCCEEEEEee
Confidence            345667888877788777 5554 566653210         00011111223688899987776665 45668888877


Q ss_pred             CCCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCC
Q psy14511        313 THSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDA  358 (488)
Q Consensus       313 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~  358 (488)
                      ... ..........++..+.++|.. .++...++.+.++++.+...
T Consensus       114 ~l~-~~~~~~~~~~~~~~~~~~p~~-~~l~~~~~~~~~~~l~~~~~  157 (381)
T d1xipa_         114 ELS-EFRTVTSFEKPVFQLKNVNNT-LVILNSVNDLSALDLRTKST  157 (381)
T ss_dssp             STT-CEEEEEECSSCEEEEEECSSE-EEEEETTSEEEEEETTTCCE
T ss_pred             ccc-cccccccccccccceecCCce-eEEEecCCCEEEEEeccCcc
Confidence            643 223333345668888888753 44444479999999988753

>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nucleoporin domain
family: Nucleoporin domain
domain: Nucleoporin NUP159
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.12  E-value=2  Score=35.87  Aligned_cols=55  Identities=13%  Similarity=-0.013  Sum_probs=36.4

Q ss_pred             eeeCCCcEEEEECCCeEEEEECCCCceEEEEec---CCCCCCceEEEEEcCCCCeEEEE
Q psy14511        204 LDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEY---PTYDNAYISCVAWKPRTTDLAVT  259 (488)
Q Consensus       204 ~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~l~~~  259 (488)
                      +.+.+..+++...++.+.++++..+........   .. -.....+++|++.+..++++
T Consensus       131 ~~~~p~~~~l~~~~~~~~~~~l~~~~~~~~~~~v~~~~-~~~~~~~v~ws~kgkq~v~~  188 (381)
T d1xipa_         131 LKNVNNTLVILNSVNDLSALDLRTKSTKQLAQNVTSFD-VTNSQLAVLLKDRSFQSFAW  188 (381)
T ss_dssp             EEECSSEEEEEETTSEEEEEETTTCCEEEEEESEEEEE-ECSSEEEEEETTSCEEEEEE
T ss_pred             eecCCceeEEEecCCCEEEEEeccCccccccCCcceEE-ecCCceEEEEeCCcEEEEEe
Confidence            334556677888899999999988875443210   00 23457777787777777665

>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: Serum paraoxonase/arylesterase 1, PON1
domain: Serum paraoxonase/arylesterase 1, PON1
species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=93.12  E-value=1.9  Score=35.56  Aligned_cols=179  Identities=8%  Similarity=0.010  Sum_probs=95.6

Q ss_pred             EEEEEcCCCCeEEEEe-----------CCCCcEEEEECCcceee-eee--ccc-----cccEEEEEe----cCC-EEEEe
Q psy14511        245 SCVAWKPRTTDLAVTN-----------TCTEYIDLWHEQEERLI-QKL--RTH-----MHQVIAMCW----NGN-LLSCG  300 (488)
Q Consensus       245 ~~~~~~~~~~~l~~~~-----------~~~~~i~i~d~~~~~~~-~~~--~~~-----~~~v~~~~~----~~~-~l~~~  300 (488)
                      -.++..|+|..+++++           ...|.|.++|+...+.. ..+  .+.     .-....++.    ++. +|++.
T Consensus        38 EDi~~~~dg~~~issg~~~~~~~~~~~~~~G~i~~~dl~~~~~~~~~l~~~~~~~~~~~f~PhGi~l~~~~dg~~~L~vv  117 (340)
T d1v04a_          38 EDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVV  117 (340)
T ss_dssp             CEEEECTTSEEEEEECCCC--------CCCCEEEEEETTSSSCCEEECEEECSSSCGGGCCEEEEEEEECTTCCEEEEEE
T ss_pred             ceEEECCCCcEEEEecCccCCCCCCCCCCCCeEEEEecCCCCCcceEEEecCCCCCCcceeccceeEEEcCCCcEEEEEE
Confidence            3566677776665552           12488999998764321 111  111     112344443    444 33333


Q ss_pred             ---ecCCeEEEEECcCCCcccee---ee-cCCccEEEEEEccCCcEEEEEe----------------cCeEEEEECCCCC
Q psy14511        301 ---TIGGNILHYDVRTHSDYPTA---IT-REGDVVCGLKWSPNGRYLASGS----------------NNTVKIWDFRQLD  357 (488)
Q Consensus       301 ---~~dg~i~i~d~~~~~~~~~~---~~-~~~~~i~~~~~s~~~~~l~~~~----------------d~~i~iwd~~~~~  357 (488)
                         ....+|.++++.........   .. ......+.+++..++.++++-.                -..-.+|.....+
T Consensus       118 nH~~~~~~ieif~~~~~~~~l~~~~~v~~~~~~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~~~~~~~  197 (340)
T d1v04a_         118 NHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPND  197 (340)
T ss_dssp             ECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCCSHHHHHHHHHTTCCCEEEEEECSSC
T ss_pred             eccCCCceeEEEEEeCCCCeEEEEeecCCccccCccceEEecCCCEEEecCccCcChhhhhhhHhhcCCceeEEEEcCCc
Confidence               24567888888654322111   11 2224478999999999888831                0123444444332


Q ss_pred             CCccccee--ee--eecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEe--eccccEEEEEEcCCCCEEEEEe
Q psy14511        358 AKRPLGLI--VP--KLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELK--IHQERILSAVLSPDQTCVAAAS  424 (488)
Q Consensus       358 ~~~~~~~~--~~--~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~t~~  424 (488)
                      ........  .+  +++||+++++++ ....++|+.|++.....+....  .-.+..-.+.+.+++..+..++
T Consensus       198 ~~~~~~~l~~pNGI~~s~d~~~lyVa-~t~~~~i~~y~~~~~~~l~~~~~~~l~~~pDNi~~d~~~g~lwva~  269 (340)
T d1v04a_         198 VRVVAEGFDFANGINISPDGKYVYIA-ELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGC  269 (340)
T ss_dssp             EEEEEEEESSEEEEEECTTSSEEEEE-EGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEE
T ss_pred             eEEEcCCCCccceeEECCCCCEEEEE-eCCCCeEEEEEeCCCcccceEEEecCCCCCCccEEecCCCEEEEEE
Confidence            22222211  11  999999999887 5667889999986443222211  1234456778876443333443

>d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Acylamino-acid-releasing enzyme, N-terminal donain
domain: Acylamino-acid-releasing enzyme, N-terminal donain
species: Aeropyrum pernix [TaxId: 56636]

Probab=92.80  E-value=1.4  Score=33.01  Aligned_cols=137  Identities=12%  Similarity=0.104  Sum_probs=75.4

Q ss_pred             eeeCC-CcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEE---------EcCCCCeEEEEeCCCCcEEEEECCc
Q psy14511        204 LDWGY-HDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVA---------WKPRTTDLAVTNTCTEYIDLWHEQE  273 (488)
Q Consensus       204 ~~~~~-~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~---------~~~~~~~l~~~~~~~~~i~i~d~~~  273 (488)
                      ....+ +-.++++......+|-++.|+..+...+++  -+.|+.+.         +.+..+.++++.-..|.+++++...
T Consensus       109 ~~yddk~vvF~Gased~~~LYviegGklrkL~~vPp--FsFVtDI~~d~I~G~g~~~g~~~sfF~adl~SG~lri~tpke  186 (313)
T d2hu7a1         109 GVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGE  186 (313)
T ss_dssp             EEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTEEEEEECCSS
T ss_pred             eeecCceEEEecccCCceEEEEEeCCceeeeccCCC--cceEEeccCCeEEEEeeecCCcceEEEEecccCCEEEecCCC
Confidence            33444 345677788899999999999888877763  33444432         2233333444422256666666554


Q ss_pred             ceeeeeeccccccEEEEEe-cCCEEEEeecC---CeEEEEECcCCCccceeeec------CCccEEEEEEccCCcEEEEE
Q psy14511        274 ERLIQKLRTHMHQVIAMCW-NGNLLSCGTIG---GNILHYDVRTHSDYPTAITR------EGDVVCGLKWSPNGRYLASG  343 (488)
Q Consensus       274 ~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~------~~~~i~~~~~s~~~~~l~~~  343 (488)
                      +.           ++.... .|+.++++.+.   ....-+|++.++-....+..      ..-.|.-+-+.|++++++.+
T Consensus       187 GS-----------~~~ay~~~gnKV~sdyEt~gEsywit~D~~s~~yerve~P~kd~~sy~p~~I~~~~Y~Pdd~L~iia  255 (313)
T d2hu7a1         187 GS-----------FSSASISPGMKVTAGLETAREARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVA  255 (313)
T ss_dssp             EE-----------EEEEEECTTSCEEEEEEESSCEEEEEECTTTCCEEECCCSSCHHHHHCCSEEEEEEECTTSCEEEEE
T ss_pred             Cc-----------ccceeEccCceeeeccCCCCceEEEEEecccCceeeeecCcccceeecceEEEeeeeCCCCcEEEEE
Confidence            43           333333 33444433221   11224477654321111111      22346667799999997777


Q ss_pred             e-cCeEEEEEC
Q psy14511        344 S-NNTVKIWDF  353 (488)
Q Consensus       344 ~-d~~i~iwd~  353 (488)
                      - ||.-++|.-
T Consensus       256 krdG~s~lF~n  266 (313)
T d2hu7a1         256 RREGRSAVFID  266 (313)
T ss_dssp             EETTEEEEEET
T ss_pred             ecCCchheeec
Confidence            6 788888863

>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Thermostable phytase (3-phytase)
family: Thermostable phytase (3-phytase)
domain: Thermostable phytase (3-phytase)
species: Bacillus amyloliquefaciens [TaxId: 1390]

Probab=87.86  E-value=6.2  Score=32.42  Aligned_cols=72  Identities=13%  Similarity=0.118  Sum_probs=44.2

Q ss_pred             CceEEEEEcCCCCeEEEEeCCCCcEEEEECCc-----ceeeeeecc--ccccEEEEEe----c--CCEEEEeecCCeEEE
Q psy14511        242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE-----ERLIQKLRT--HMHQVIAMCW----N--GNLLSCGTIGGNILH  308 (488)
Q Consensus       242 ~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~-----~~~~~~~~~--~~~~v~~~~~----~--~~~l~~~~~dg~i~i  308 (488)
                      ..+..+.+.+..+.|+++ -.+..+..++...     ...+....+  ....+-.++.    +  |-+|++.-.+++..+
T Consensus       180 ~q~EGCVvDde~~~Lyis-EE~~Giw~~~a~~~~~~~~~~i~~~~g~~l~~D~EGlaiy~~~~~~GylivSsQG~n~f~v  258 (353)
T d1h6la_         180 SQTEGMAADDEYGSLYIA-EEDEAIWKFSAEPDGGSNGTVIDRADGRHLTPDIEGLTIYYAADGKGYLLASSQGNSSYAI  258 (353)
T ss_dssp             SCEEEEEEETTTTEEEEE-ETTTEEEEEESSTTSCSCCEEEEECSSSSCCSCEEEEEEEECGGGCEEEEEEEGGGTEEEE
T ss_pred             CccceEEEeCCCCcEEEe-cCccceEEEEeccCCCccceeeecccCccccCCccccEEEEcCCCCeEEEEEcCCCCeEEE
Confidence            357778888888888888 6666666665432     122222211  3455666665    2  345555556788999


Q ss_pred             EECcCC
Q psy14511        309 YDVRTH  314 (488)
Q Consensus       309 ~d~~~~  314 (488)
                      ||....
T Consensus       259 ydr~~~  264 (353)
T d1h6la_         259 YERQGQ  264 (353)
T ss_dssp             EESSTT
T ss_pred             EecCCC
Confidence            998764

>d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Acylamino-acid-releasing enzyme, N-terminal donain
domain: Acylamino-acid-releasing enzyme, N-terminal donain
species: Aeropyrum pernix [TaxId: 56636]

Probab=83.97  E-value=6.8  Score=29.24  Aligned_cols=209  Identities=11%  Similarity=0.073  Sum_probs=112.8

Q ss_pred             cEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEE-cCCCCeEEEE-----eCCCCcEEEEECCcceeeeeeccc
Q psy14511        210 DTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAW-KPRTTDLAVT-----NTCTEYIDLWHEQEERLIQKLRTH  283 (488)
Q Consensus       210 ~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~l~~~-----~~~~~~i~i~d~~~~~~~~~~~~~  283 (488)
                      .++.+...|.+.++-+..++......      .+|..... .+.-..+...     |-....+.+-++........+...
T Consensus        28 ll~~~~seG~vni~~l~g~~~vkLtk------ePI~~~~~Pk~~ldfi~f~RDV~kGkE~Hai~~~Nlk~~GEE~~i~sp  101 (313)
T d2hu7a1          28 LLVVGFSEGSVNAYLYDGGETVKLNR------EPINSVLDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEEQRLEAV  101 (313)
T ss_dssp             EEEEEEETTEEEEEEESSSSCEECCS------SCCSEECEECTTBSEEEEEEECSTTSCCEEEEEEETTSTTCEEECTTS
T ss_pred             EEEEEeccceEEEEEEeCCEEEEEec------ccccCcCCCccCcceEEEEeehhcCcceeeEEEEccCCCCeeeEecCC
Confidence            45556699999999888887665432      33332221 1111222222     122334555555533333344443


Q ss_pred             c-ccEEEEEec-CCEEEEeecCCeEEEEECcCCCcc-ceeeec-------CCccEEEEEE-ccCCcEEEEEe--cCeEEE
Q psy14511        284 M-HQVIAMCWN-GNLLSCGTIGGNILHYDVRTHSDY-PTAITR-------EGDVVCGLKW-SPNGRYLASGS--NNTVKI  350 (488)
Q Consensus       284 ~-~~v~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~-------~~~~i~~~~~-s~~~~~l~~~~--d~~i~i  350 (488)
                      . -.|.+++.+ .+.+.+|+......+|-++.++.. +..+.+       ..+-|..+.+ .+..+-+.++.  .|.++|
T Consensus       102 k~vRI~S~~yddk~vvF~Gased~~~LYviegGklrkL~~vPpFsFVtDI~~d~I~G~g~~~g~~~sfF~adl~SG~lri  181 (313)
T d2hu7a1         102 KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPGFGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRV  181 (313)
T ss_dssp             CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESSCEEEEEEETTEEEEEEEEETTEEEEEEEETTTEEEEE
T ss_pred             ceEEEEEeeecCceEEEecccCCceEEEEEeCCceeeeccCCCcceEEeccCCeEEEEeeecCCcceEEEEecccCCEEE
Confidence            3 678888885 567778888888899988876421 111111       1223444433 33333344444  388888


Q ss_pred             EECCCCCCCcccceeeeeecCCCCEEEEEccCC---CCeEEEEeCCCcceeE-EEee------ccccEEEEEEcCCCCEE
Q psy14511        351 WDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQ---DCSLKMWEYPRLHLIE-ELKI------HQERILSAVLSPDQTCV  420 (488)
Q Consensus       351 wd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~---~~~i~i~d~~~~~~~~-~~~~------~~~~v~~~~~s~~~~~l  420 (488)
                      ++...+....      ....++.+. ++  +.+   +....-+|+++++... .+..      ..-.|+-+-+.||++++
T Consensus       182 ~tpkeGS~~~------ay~~~gnKV-~s--dyEt~gEsywit~D~~s~~yerve~P~kd~~sy~p~~I~~~~Y~Pdd~L~  252 (313)
T d2hu7a1         182 FDSGEGSFSS------ASISPGMKV-TA--GLETAREARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDGRLA  252 (313)
T ss_dssp             ECCSSEEEEE------EEECTTSCE-EE--EEEESSCEEEEEECTTTCCEEECCCSSCHHHHHCCSEEEEEEECTTSCEE
T ss_pred             ecCCCCcccc------eeEccCcee-ee--ccCCCCceEEEEEecccCceeeeecCcccceeecceEEEeeeeCCCCcEE
Confidence            8876653211      133344433 22  111   1222244776654322 1211      12356667799999999


Q ss_pred             EEEeCCCcEEEEe
Q psy14511        421 AAASADETISIWN  433 (488)
Q Consensus       421 ~t~~~dg~v~iw~  433 (488)
                      +.+-.||.-+++.
T Consensus       253 iiakrdG~s~lF~  265 (313)
T d2hu7a1         253 VVARREGRSAVFI  265 (313)
T ss_dssp             EEEEETTEEEEEE
T ss_pred             EEEecCCchheee
Confidence            9999999999886