Psyllid ID: psy14644

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140
Protein Sequence
IYIFHVASPPGHPNFTQCVSFNSFASDTHERYYNYFTVVVMYVIPMCIIVFSYFNIYVEVSKRKGINFCGTNRALRGNIIDNSNVKLATVLDSTPGGTIRLRMNDVSNINKTRIRTLKMTVIIVLTFFWCWTPYVIMTVW
Secondary Structure (PSIPRED)
cEEEEEEccccccccEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cEEEEEEEEccccccEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHcccccccccccccccccHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcHHEEEEcc
Coil and Loop (DISEMBL)
iyifhvasppghpnftqcvsfnsfasdtherYYNYFTVVVMYVIPMCIIVFSYFNIYVEVSkrkginfcgtnralrgniidnsnvklatvldstpggtirlrmndvsniNKTRIRTLKMTVIIVLTFFwcwtpyvimtvw
Flexible Loop (DISEMBL)
IYIFhvasppghpnfTQCVSFNSFASDTHERYYNYFTVVVMYVIPMCIIVFSYFNIYVEVSKRKGINFCGTNRAlrgniidnsnvklatvldstpggtirlrmndvsninktrirtlKMTVIIVLTFFWCWTPYVIMTVW
Low Complexity Region (SEG)
IYIFHVASPPGHPNFTQCVSFNSFASDTHERYYNYFTVVVMYVIPMCIIVFSYFNIYVEVSKRKGINFCGTNRALRGNIIDNSNVKLATVLDSTPGGTIRLRMNDVSNINKTRIRTLKMTVIIVLTFFWCWTPYVIMTVW
Disordered region (IsUnstruct)
*YIFHVAS*PGHPNFTQCVSFNSFASDTHERYYNYFTVVVMYVIPMCIIVFSYFNIYVEVSKRKGINFCGTNRALRGNIIDNSNVKLATVLDSTPGGTIRLRMNDVSNINKTRIRTLKMTVIIVLTFFWCWTPYVIMTV*
Disordered Region (DISOPRED)
IYIFHVASPPGHPNFTQCVSFNSFASDTHERYYNYFTVVVMYVIPMCIIVFSYFNIYVEVSK*****************************************************TLKMTVIIVLTFFWCWTPYVIMTVW
Disordered Region (DISEMBL)
IYIFHVASPPGHPNFTQCVSFNSFASDTHERYYNYFTVVVMYVIPMCIIVFSYFNIYVEVSKRKGINFCGTNRALRGNIIDNSNVKLATVLDSTPGGTIRLRMNDVSNINKTRIRTLKMTVIIVLTFFWCWTPYVIMTVW
Disordered Region (DISPRO)
IYIFHVASPPGHPNFTQCVSFNSFASDTHERYYNYFTVVVMYVIPMCIIVFSYFNIYVEVSKRKGI***************************************VSNINKTRIRTLKMTVIIVLTFFWCWTPYVIMTVW
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
IYIFHVASPPGHPNFTQCVSFNSFASDTHERYYNYFTVVVMYVIPMCIIVFSYFNIYVEVSKRKGINFCGTNRALRGNIIDNSNVKLATVLDSTPGGTIRLRMNDVSNINKTRIRTLKMTVIIVLTFFWCWTPYVIMTVW
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	140	2.2.26 [Sep-21-2011]
O42329	379	Gonadotropin-releasing ho	N/A	N/A	0.814	0.300	0.307	3e-12
P49922	328	Gonadotropin-releasing ho	yes	N/A	0.785	0.335	0.296	5e-11
Q8CH60	328	Gonadotropin-releasing ho	yes	N/A	0.785	0.335	0.289	5e-11
P32236	328	Gonadotropin-releasing ho	yes	N/A	0.785	0.335	0.303	1e-10
Q19PY9	328	Gonadotropin-releasing ho	N/A	N/A	0.785	0.335	0.303	1e-10
P30969	327	Gonadotropin-releasing ho	yes	N/A	0.771	0.330	0.308	1e-10
P32237	328	Gonadotropin-releasing ho	N/A	N/A	0.785	0.335	0.296	2e-10
Q01776	327	Gonadotropin-releasing ho	yes	N/A	0.771	0.330	0.301	3e-10
O18821	328	Gonadotropin-releasing ho	yes	N/A	0.771	0.329	0.299	5e-10
P30968	328	Gonadotropin-releasing ho	yes	N/A	0.771	0.329	0.299	7e-10

>sp|O42329|GNRR2_CLAGA Gonadotropin-releasing hormone II receptor OS=Clarias gariepinus PE=2 SV=2

 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 64/140 (45%), Gaps = 26/140 (18%)

Query: 1   IYIFHVASPPGHPNFTQCVSFNSFASDTHERYYNYFTVVVMYVIPMCIIVFSYFNIYVEV 60
           ++IF      G  +F QC +  SF     E  YN F  V +YV P+ ++   Y  I VE+
Sbjct: 178 LFIFRAIKAKG-VDFVQCATHGSFQQHWQETAYNMFHFVTLYVFPLLVMSLCYTRILVEI 236

Query: 61  SKRKGINFCGTNRALRGNIIDNSNVKLATVLDSTPGGTIRLRMNDVSNINKTRIRTLKMT 120
           +++                +  S  K          G   LR +    I K R++TLKMT
Sbjct: 237 NRQ----------------MHRSKDK---------AGEPCLRRSGTDMIPKARMKTLKMT 271

Query: 121 VIIVLTFFWCWTPYVIMTVW 140
           +IIV +F  CWTPY ++ +W
Sbjct: 272 IIIVASFVICWTPYYLLGIW 291

Receptor for gonadotropin releasing hormone II (GnRH II). This receptor mediates its action by association with G proteins that activate a phosphatidylinositol-calcium second messenger system.
Clarias gariepinus (taxid: 13013)

>sp|P49922|GNRHR_PIG Gonadotropin-releasing hormone receptor OS=Sus scrofa GN=GNRHR PE=2 SV=2

 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 67/145 (46%), Gaps = 35/145 (24%)

Query: 1   IYIF---HVASPPGH-PNFTQCVSFNSFASDTHERYYNYFTVVVMYVIPMCIIVFSYFNI 56
           +YIF   H+A   G    F+QCV+  SF    H+ +YN+FT   +++IP+ I++     I
Sbjct: 175 LYIFRMIHLADSSGQTEGFSQCVTHGSFPQWWHQAFYNFFTFSCLFIIPLLIMLICNAKI 234

Query: 57  YVEVSKRKGINFCGTNRALRGNIIDNSNVKLATVLDSTPGGTIRLRMNDVS-NINKTRIR 115
              +++                           VL   P     L++N    NI + R+R
Sbjct: 235 MFTLTR---------------------------VLQQDPHN---LQLNQSKNNIPRARLR 264

Query: 116 TLKMTVIIVLTFFWCWTPYVIMTVW 140
           TLKMTV    +F  CWTPY ++ +W
Sbjct: 265 TLKMTVAFAASFIVCWTPYYVLGIW 289

Receptor for gonadotropin releasing hormone (GnRH) that mediates the action of GnRH to stimulate the secretion of the gonadotropic hormones luteinizing hormone (LH) and follicle-stimulating hormone (FSH). This receptor mediates its action by association with G-proteins that activate a phosphatidylinositol-calcium second messenger system.

Sus scrofa (taxid: 9823)

>sp|Q8CH60|GNRHR_CAVPO Gonadotropin-releasing hormone receptor OS=Cavia porcellus GN=GNRHR PE=2 SV=2

 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 35/145 (24%)

Query: 1   IYIF---HVASPPGHPN-FTQCVSFNSFASDTHERYYNYFTVVVMYVIPMCIIVFSYFNI 56
           +YIF   H+ + PG    F+QCV+  SF    H+ +YN+FT + +++IP+ I++     I
Sbjct: 175 LYIFKMIHLENGPGQTEVFSQCVTHCSFPQWWHQAFYNFFTFICLFIIPLLIMLICNAKI 234

Query: 57  YVEVSKRKGINFCGTNRALRGNIIDNSNVKLATVLDSTPGGTIRLRMNDVSN-INKTRIR 115
              +++                +  +SN               +L++N   N I + R+R
Sbjct: 235 IFTLTQV---------------LQQDSN---------------KLQLNQSKNNIPRARLR 264

Query: 116 TLKMTVIIVLTFFWCWTPYVIMTVW 140
           TLKMTV    +F  CWTPY ++ +W
Sbjct: 265 TLKMTVAFAASFIVCWTPYYVLGLW 289

Receptor for gonadotropin releasing hormone (GnRH) that mediates the action of GnRH to stimulate the secretion of the gonadotropic hormones luteinizing hormone (LH) and follicle-stimulating hormone (FSH). This receptor mediates its action by association with G-proteins that activate a phosphatidylinositol-calcium second messenger system.

Cavia porcellus (taxid: 10141)

>sp|P32236|GNRHR_BOVIN Gonadotropin-releasing hormone receptor OS=Bos taurus GN=GNRHR PE=2 SV=1

 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 35/145 (24%)

Query: 1   IYIF---HVASPPGH-PNFTQCVSFNSFASDTHERYYNYFTVVVMYVIPMCIIVFSYFNI 56
           +YIF   H+A   G    F+QCV+  SF    H+ +YN+FT   +++IP+ I+V     I
Sbjct: 175 LYIFGMIHLADDSGQTEGFSQCVTHCSFPQWWHQAFYNFFTFSCLFIIPLLIMVICNAKI 234

Query: 57  YVEVSKRKGINFCGTNRALRGNIIDNSNVKLATVLDSTPGGTIRLRMNDVSN-INKTRIR 115
              +++                           VL   P    +L++N   N I + R+R
Sbjct: 235 IFTLTR---------------------------VLHQDPH---KLQLNQSKNNIPRARLR 264

Query: 116 TLKMTVIIVLTFFWCWTPYVIMTVW 140
           TLKMTV    +F  CWTPY ++ +W
Sbjct: 265 TLKMTVAFATSFTVCWTPYYVLGIW 289

Receptor for gonadotropin releasing hormone (GnRH) that mediates the action of GnRH to stimulate the secretion of the gonadotropic hormones luteinizing hormone (LH) and follicle-stimulating hormone (FSH). This receptor mediates its action by association with G-proteins that activate a phosphatidylinositol-calcium second messenger system.

Bos taurus (taxid: 9913)

>sp|Q19PY9|GNRHR_BOSMU Gonadotropin-releasing hormone receptor OS=Bos mutus grunniens GN=GNRHR PE=3 SV=1

 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 35/145 (24%)

Query: 1   IYIF---HVASPPGH-PNFTQCVSFNSFASDTHERYYNYFTVVVMYVIPMCIIVFSYFNI 56
           +YIF   H+A   G    F+QCV+  SF    H+ +YN+FT   +++IP+ I+V     I
Sbjct: 175 LYIFGMIHLADDSGQTEGFSQCVTHCSFPQWWHQAFYNFFTFSCLFIIPLLIMVICNAKI 234

Query: 57  YVEVSKRKGINFCGTNRALRGNIIDNSNVKLATVLDSTPGGTIRLRMNDVSN-INKTRIR 115
              +++                           VL   P    +L++N   N I + R+R
Sbjct: 235 IFTLTR---------------------------VLHQDPH---KLQLNQSKNNIPRARLR 264

Query: 116 TLKMTVIIVLTFFWCWTPYVIMTVW 140
           TLKMTV    +F  CWTPY ++ +W
Sbjct: 265 TLKMTVAFATSFTVCWTPYYVLGIW 289

Receptor for gonadotropin releasing hormone (GnRH) that mediates the action of GnRH to stimulate the secretion of the gonadotropic hormones luteinizing hormone (LH) and follicle-stimulating hormone (FSH). This receptor mediates its action by association with G-proteins that activate a phosphatidylinositol-calcium second messenger system.

Bos mutus grunniens (taxid: 30521)

>sp|P30969|GNRHR_RAT Gonadotropin-releasing hormone receptor OS=Rattus norvegicus GN=Gnrhr PE=2 SV=2

 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 38/146 (26%)

Query: 1   IYIF---HVASPPGHPNFTQCVSFNSFASDTHERYYNYFTVVVMYVIPMCIIVFSYFNIY 57
           +YIF   ++A   G   F+QCV+  SF    HE +YN+FT   +++IP+ I+        
Sbjct: 175 LYIFRMIYLADGSGPAVFSQCVTHCSFPQWWHEAFYNFFTFSCLFIIPLLIM-------- 226

Query: 58  VEVSKRKGINFCGTNRALRGNIIDNSNV--KLATVLDSTPGGTIRLRMNDVSN-INKTRI 114
                                +I N+ +   L  VL   P    +L++N   N I + R+
Sbjct: 227 ---------------------LICNAKIIFALTRVLHQDPR---KLQLNQSKNNIPRARL 262

Query: 115 RTLKMTVIIVLTFFWCWTPYVIMTVW 140
           RTLKMTV    +F  CWTPY ++ +W
Sbjct: 263 RTLKMTVAFGTSFVICWTPYYVLGIW 288

Receptor for gonadotropin releasing hormone (GnRH) that mediates the action of GnRH to stimulate the secretion of the gonadotropic hormones luteinizing hormone (LH) and follicle-stimulating hormone (FSH). This receptor mediates its action by association with G-proteins that activate a phosphatidylinositol-calcium second messenger system.

Rattus norvegicus (taxid: 10116)

>sp|P32237|GNRHR_SHEEP Gonadotropin-releasing hormone receptor OS=Ovis aries GN=GNRHR PE=2 SV=1

 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 35/145 (24%)

Query: 1   IYIF---HVASPPGH-PNFTQCVSFNSFASDTHERYYNYFTVVVMYVIPMCIIVFSYFNI 56
           +YIF   H+A   G    F+QCV+  SF    H+ +YN+FT   +++IP+ I++     I
Sbjct: 175 LYIFGMIHLADDSGQTEGFSQCVTHCSFPQWWHQAFYNFFTFSCLFIIPLLIMLICNAKI 234

Query: 57  YVEVSKRKGINFCGTNRALRGNIIDNSNVKLATVLDSTPGGTIRLRMNDVSN-INKTRIR 115
              +++                           VL   P    +L++N   N I + R+R
Sbjct: 235 IFTLTR---------------------------VLHQDPH---KLQLNQSKNNIPQARLR 264

Query: 116 TLKMTVIIVLTFFWCWTPYVIMTVW 140
           TLKMTV    +F  CWTPY ++ +W
Sbjct: 265 TLKMTVAFATSFTVCWTPYYVLGIW 289

Receptor for gonadotropin releasing hormone (GnRH) that mediates the action of GnRH to stimulate the secretion of the gonadotropic hormones luteinizing hormone (LH) and follicle-stimulating hormone (FSH). This receptor mediates its action by association with G-proteins that activate a phosphatidylinositol-calcium second messenger system.

Ovis aries (taxid: 9940)

>sp|Q01776|GNRHR_MOUSE Gonadotropin-releasing hormone receptor OS=Mus musculus GN=Gnrhr PE=2 SV=1

 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 69/146 (47%), Gaps = 38/146 (26%)

Query: 1   IYIF---HVASPPGHPNFTQCVSFNSFASDTHERYYNYFTVVVMYVIPMCIIVFSYFNIY 57
           +YIF   ++A   G   F+QCV+  SF    H+ +YN+FT   +++IP+ I+        
Sbjct: 175 LYIFRMIYLADGSGPTVFSQCVTHCSFPQWWHQAFYNFFTFGCLFIIPLLIM-------- 226

Query: 58  VEVSKRKGINFCGTNRALRGNIIDNSNV--KLATVLDSTPGGTIRLRMNDVSN-INKTRI 114
                                +I N+ +   L  VL   P    +L++N   N I + R+
Sbjct: 227 ---------------------LICNAKIIFALTRVLHQDPR---KLQLNQSKNNIPRARL 262

Query: 115 RTLKMTVIIVLTFFWCWTPYVIMTVW 140
           RTLKMTV    +F  CWTPY ++ +W
Sbjct: 263 RTLKMTVAFATSFVVCWTPYYVLGIW 288

Receptor for gonadotropin releasing hormone (GnRH) that mediates the action of GnRH to stimulate the secretion of the gonadotropic hormones luteinizing hormone (LH) and follicle-stimulating hormone (FSH). This receptor mediates its action by association with G-proteins that activate a phosphatidylinositol-calcium second messenger system.

Mus musculus (taxid: 10090)

>sp|O18821|GNRHR_HORSE Gonadotropin-releasing hormone receptor OS=Equus caballus GN=GNRHR PE=2 SV=3

 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 68/147 (46%), Gaps = 39/147 (26%)

Query: 1   IYIF---HVASPPGH-PNFTQCVSFNSFASDTHERYYNYFTVVVMYVIPMCIIVFSYFNI 56
           +YIF   H+A   G    F+QCV+  SF    H+ +YN+FT   +++IP+  +       
Sbjct: 175 LYIFRMIHLADSSGQTEGFSQCVTHCSFPQWWHQAFYNFFTFSCLFIIPLLFM------- 227

Query: 57  YVEVSKRKGINFCGTNRALRGNIIDNSNV--KLATVLDSTPGGTIRLRMNDVSN-INKTR 113
                                 +I N+ +   L  VL   P    +L++N   N I + R
Sbjct: 228 ----------------------LICNAKIIFTLTRVLHQDPH---KLQLNQSKNNIPRAR 262

Query: 114 IRTLKMTVIIVLTFFWCWTPYVIMTVW 140
           +RTLKMTV    +F  CWTPY ++ +W
Sbjct: 263 LRTLKMTVAFATSFTVCWTPYYVLGIW 289

Receptor for gonadotropin releasing hormone (GnRH) that mediates the action of GnRH to stimulate the secretion of the gonadotropic hormones luteinizing hormone (LH) and follicle-stimulating hormone (FSH). This receptor mediates its action by association with G-proteins that activate a phosphatidylinositol-calcium second messenger system.

Equus caballus (taxid: 9796)

>sp|P30968|GNRHR_HUMAN Gonadotropin-releasing hormone receptor OS=Homo sapiens GN=GNRHR PE=1 SV=1

 Score = 62.4 bits (150), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 69/147 (46%), Gaps = 39/147 (26%)

Query: 1   IYIF---HVASPPGHPN-FTQCVSFNSFASDTHERYYNYFTVVVMYVIPMCIIVFSYFNI 56
           +YIF   H+A   G    F+QCV+  SF+   H+ +YN+FT   +++IP+ I+       
Sbjct: 175 LYIFRMIHLADSSGQTKVFSQCVTHCSFSQWWHQAFYNFFTFSCLFIIPLFIM------- 227

Query: 57  YVEVSKRKGINFCGTNRALRGNIIDNSNV--KLATVLDSTPGGTIRLRMNDVSN-INKTR 113
                                 +I N+ +   L  VL   P     L++N   N I + R
Sbjct: 228 ----------------------LICNAKIIFTLTRVLHQDPH---ELQLNQSKNNIPRAR 262

Query: 114 IRTLKMTVIIVLTFFWCWTPYVIMTVW 140
           ++TLKMTV    +F  CWTPY ++ +W
Sbjct: 263 LKTLKMTVAFATSFTVCWTPYYVLGIW 289

Receptor for gonadotropin releasing hormone (GnRH) that mediates the action of GnRH to stimulate the secretion of the gonadotropic hormones luteinizing hormone (LH) and follicle-stimulating hormone (FSH). This receptor mediates its action by association with G-proteins that activate a phosphatidylinositol-calcium second messenger system. Isoform 2 may act as an inhibitor of GnRH-R signaling.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	140
283806645	494	ACP receptor [Nasonia vitripennis] gi|24	0.928	0.263	0.434	7e-25
240974375	181	gonadotropin-releasing hormone receptor,	0.814	0.629	0.419	9e-22
158301919	426	AGAP001532-PA [Anopheles gambiae str. PE	0.835	0.274	0.405	9e-22
160905682	474	ACP receptor [Anopheles gambiae]	0.835	0.246	0.405	1e-21
403183057	325	AAEL009673-PA, partial [Aedes aegypti]	0.835	0.36	0.398	2e-20
157123803	329	gonadotropin-releasing hormone receptor	0.835	0.355	0.398	2e-20
443695457	316	hypothetical protein CAPTEDRAFT_136055 [	0.85	0.376	0.413	2e-20
170029979	383	gonadotropin-releasing hormone receptor	0.835	0.305	0.398	3e-20
160905684	457	ACP receptor [Tribolium castaneum]	0.85	0.260	0.381	2e-19
270002847	451	hypothetical protein TcasGA2_TC001245 [T	0.85	0.263	0.381	2e-19

>gi|283806645|ref|NP_001164571.1| ACP receptor [Nasonia vitripennis] gi|242346723|gb|ACR33032.1| ACP receptor [Nasonia vitripennis]

 Score =  118 bits (296), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 60/138 (43%), Positives = 83/138 (60%), Gaps = 8/138 (5%)

Query: 3   IFHVASPPGHPNFTQCVSFNSFASDTHERYYNYFTVVVMYVIPMCIIVFSYFNIYVEVSK 62
           +FHV + P H NFTQCV+F +F SD  E  YN F V+ MY IP+ II + Y  I  E+S 
Sbjct: 186 VFHVENHPHHKNFTQCVTFGAFPSDLVENTYNVFCVLTMYFIPLAIICWVYLKILCEISS 245

Query: 63  RKGINFCGTNRALRGNIIDNSNVKLATVLDSTPGGTIRLRMNDVSNINKTRIRTLKMTVI 122
           +   N     +A     +++SN        S  G  +RLR +D+S+I + R RTLKMT+I
Sbjct: 246 KSRDNKPVVIKAGSNGTLESSN--------SNQGSRMRLRRSDMSSIERARSRTLKMTII 297

Query: 123 IVLTFFWCWTPYVIMTVW 140
           IV+ F +CWTPY+ M +W
Sbjct: 298 IVVAFIFCWTPYITMNLW 315

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|240974375|ref|XP_002401870.1| gonadotropin-releasing hormone receptor, putative [Ixodes scapularis] gi|215491078|gb|EEC00719.1| gonadotropin-releasing hormone receptor, putative [Ixodes scapularis]

 Score =  108 bits (269), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 55/131 (41%), Positives = 75/131 (57%), Gaps = 17/131 (12%)

Query: 10  PGHPNFTQCVSFNSFASDTHERYYNYFTVVVMYVIPMCIIVFSYFNIYVEVSKRKGINFC 69
           P  P F QCV+F SF S  HER YN F ++V+Y +P+  I+  Y  I  E+         
Sbjct: 4   PALPGFFQCVTFASFPSPWHERAYNLFCLLVLYGVPLSAILVCYSRILWEI--------- 54

Query: 70  GTNRALRGNIIDNSNVKLATVLDSTPGGTIRLRMNDVSNINKTRIRTLKMTVIIVLTFFW 129
             +R  R    D  N         +PGG++RLR +D+  +++ R RTL++TVIIVL FFW
Sbjct: 55  --HRQSREPCADQLNG------FKSPGGSLRLRRSDMRQMHRARYRTLRLTVIIVLAFFW 106

Query: 130 CWTPYVIMTVW 140
           CWTPYV M +W
Sbjct: 107 CWTPYVTMVLW 117

Source: Ixodes scapularis

Species: Ixodes scapularis

Genus: Ixodes

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158301919|ref|XP_321591.4| AGAP001532-PA [Anopheles gambiae str. PEST] gi|47606680|gb|AAT36323.1| G-protein coupled receptor 4 [Anopheles gambiae] gi|157012703|gb|EAA00865.4| AGAP001532-PA [Anopheles gambiae str. PEST]

 Score =  108 bits (269), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 56/138 (40%), Positives = 75/138 (54%), Gaps = 21/138 (15%)

Query: 3   IFHVASPPGHPNFTQCVSFNSFASDTHERYYNYFTVVVMYVIPMCIIVFSYFNIYVEVSK 62
           IF V   P  P FTQCV+F  FA+   E  YN F V+ MY +P+ II  +Y  I  E+S 
Sbjct: 213 IFRVQQHPQVPGFTQCVTFGFFATPGLETAYNLFCVIAMYFLPLMIISGAYTVILCEISN 272

Query: 63  RKGINFCGTNRALRGNIIDNSNVKLATVLDSTPGGTIRLRMNDVSNINKTRIRTLKMTVI 122
           R                      +     DS   GT+RLR ND+++I + R RTL++T+ 
Sbjct: 273 RS---------------------REKETSDSNSTGTMRLRCNDLTHIERARQRTLRLTIT 311

Query: 123 IVLTFFWCWTPYVIMTVW 140
           IV+ F WCWTPYV+MT+W
Sbjct: 312 IVVVFVWCWTPYVVMTLW 329

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|160905682|gb|ABX52399.1| ACP receptor [Anopheles gambiae]

 Score =  107 bits (267), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 56/138 (40%), Positives = 75/138 (54%), Gaps = 21/138 (15%)

Query: 3   IFHVASPPGHPNFTQCVSFNSFASDTHERYYNYFTVVVMYVIPMCIIVFSYFNIYVEVSK 62
           IF V   P  P FTQCV+F  FA+   E  YN F V+ MY +P+ II  +Y  I  E+S 
Sbjct: 213 IFRVQQHPQVPGFTQCVTFGFFATPGLETAYNLFCVIAMYFLPLMIISGAYTVILCEISN 272

Query: 63  RKGINFCGTNRALRGNIIDNSNVKLATVLDSTPGGTIRLRMNDVSNINKTRIRTLKMTVI 122
           R                      +     DS   GT+RLR ND+++I + R RTL++T+ 
Sbjct: 273 RS---------------------REKETSDSNSTGTMRLRCNDLTHIERARQRTLRLTIT 311

Query: 123 IVLTFFWCWTPYVIMTVW 140
           IV+ F WCWTPYV+MT+W
Sbjct: 312 IVVVFVWCWTPYVVMTLW 329

Source: Anopheles gambiae

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|403183057|gb|EAT38429.2| AAEL009673-PA, partial [Aedes aegypti]

 Score =  103 bits (257), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 55/138 (39%), Positives = 76/138 (55%), Gaps = 21/138 (15%)

Query: 3   IFHVASPPGHPNFTQCVSFNSFASDTHERYYNYFTVVVMYVIPMCIIVFSYFNIYVEVSK 62
           IF V   P  P+FTQCV+F  F +   E  YN F VV MY +P+ +I  +Y  I  E+S 
Sbjct: 143 IFRVQHHPNVPDFTQCVTFGFFTTPAMETAYNLFCVVAMYFMPLMVISAAYTVILCEIS- 201

Query: 63  RKGINFCGTNRALRGNIIDNSNVKLATVLDSTPGGTIRLRMNDVSNINKTRIRTLKMTVI 122
                    NR+      D S+            G +RLR ND+++I + R RTL++T+ 
Sbjct: 202 ---------NRSREKETSDTSHT-----------GGMRLRCNDLTHIERARQRTLRLTIT 241

Query: 123 IVLTFFWCWTPYVIMTVW 140
           IV+ F WCWTPYV+MT+W
Sbjct: 242 IVVVFVWCWTPYVVMTLW 259

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157123803|ref|XP_001653920.1| gonadotropin-releasing hormone receptor [Aedes aegypti]

 Score =  103 bits (257), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 55/138 (39%), Positives = 76/138 (55%), Gaps = 21/138 (15%)

Query: 3   IFHVASPPGHPNFTQCVSFNSFASDTHERYYNYFTVVVMYVIPMCIIVFSYFNIYVEVSK 62
           IF V   P  P+FTQCV+F  F +   E  YN F VV MY +P+ +I  +Y  I  E+S 
Sbjct: 146 IFRVQHHPNVPDFTQCVTFGFFTTPAMETAYNLFCVVAMYFMPLMVISAAYTVILCEIS- 204

Query: 63  RKGINFCGTNRALRGNIIDNSNVKLATVLDSTPGGTIRLRMNDVSNINKTRIRTLKMTVI 122
                    NR+      D S+            G +RLR ND+++I + R RTL++T+ 
Sbjct: 205 ---------NRSREKETSDTSHT-----------GGMRLRCNDLTHIERARQRTLRLTIT 244

Query: 123 IVLTFFWCWTPYVIMTVW 140
           IV+ F WCWTPYV+MT+W
Sbjct: 245 IVVVFVWCWTPYVVMTLW 262

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|443695457|gb|ELT96363.1| hypothetical protein CAPTEDRAFT_136055 [Capitella teleta]

 Score =  103 bits (257), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/138 (41%), Positives = 78/138 (56%), Gaps = 19/138 (13%)

Query: 3   IFHVASPPGHPNFTQCVSFNSFASDTHERYYNYFTVVVMYVIPMCIIVFSYFNIYVEVSK 62
           I+HV S P HP F QCV+FN F + TH+  YN F    +Y+ P+ +IV SY  I +E++K
Sbjct: 154 IYHVESHPNHPWFKQCVTFNFFPTTTHQMIYNVFCFSALYLAPLVVIVISYSFILIEITK 213

Query: 63  RKGINFCGTNRALRGNIIDNSNVKLATVLDSTPGGTIRLRMNDVSNINKTRIRTLKMTVI 122
           R        +R  RG    ++N  +A+        T  LR + V  + K RIRTLKMT++
Sbjct: 214 R--------SREGRGG---DTNSMIAS--------TGSLRRSGVGRMEKARIRTLKMTIV 254

Query: 123 IVLTFFWCWTPYVIMTVW 140
           IV  F  CWTPY  M +W
Sbjct: 255 IVFVFVMCWTPYYAMIIW 272

Source: Capitella teleta

Species: Capitella teleta

Genus: Capitella

Family: Capitellidae

Order: Capitellida

Class: Polychaeta

Phylum: Annelida

Superkingdom: Eukaryota

>gi|170029979|ref|XP_001842868.1| gonadotropin-releasing hormone receptor [Culex quinquefasciatus] gi|167865328|gb|EDS28711.1| gonadotropin-releasing hormone receptor [Culex quinquefasciatus]

 Score =  103 bits (256), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 55/138 (39%), Positives = 75/138 (54%), Gaps = 21/138 (15%)

Query: 3   IFHVASPPGHPNFTQCVSFNSFASDTHERYYNYFTVVVMYVIPMCIIVFSYFNIYVEVSK 62
           IF V   P  P FTQCV+F  F +   E  YN F V+ MY +P+ II  +Y  I  E+S 
Sbjct: 147 IFRVQQHPQVPGFTQCVTFGFFRTPGMETAYNLFCVIAMYFMPLMIISAAYTVILCEIS- 205

Query: 63  RKGINFCGTNRALRGNIIDNSNVKLATVLDSTPGGTIRLRMNDVSNINKTRIRTLKMTVI 122
                    NR+      D S+            G +RLR ND+++I + R RTL++T+ 
Sbjct: 206 ---------NRSREKETSDTSHT-----------GGMRLRCNDLTHIERARQRTLRLTIT 245

Query: 123 IVLTFFWCWTPYVIMTVW 140
           IV+ F WCWTPYV+MT+W
Sbjct: 246 IVVVFVWCWTPYVVMTLW 263

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|160905684|gb|ABX52400.1| ACP receptor [Tribolium castaneum]

 Score =  100 bits (250), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 53/139 (38%), Positives = 77/139 (55%), Gaps = 20/139 (14%)

Query: 2   YIFHVASPPGHPNFTQCVSFNSFASDTHERYYNYFTVVVMYVIPMCIIVFSYFNIYVEVS 61
           ++F V + P +PN+ QCVSF  F +   E  YN   V+ MY IP+ +I+ +Y  I  E+S
Sbjct: 179 FVFRVRAHPKYPNYEQCVSFGFFENTAQEIAYNLMCVMCMYFIPLFVIIVAYTAIMCEIS 238

Query: 62  KRKGINFCGTNRALRGNIIDNSNVKLATVLDSTPGGTIRLRMNDVSNINKTRIRTLKMTV 121
           K         ++  +G     SN            G +RLR +D+SNI + R RTL+MT+
Sbjct: 239 K--------NSKETKGESYRTSN------------GRMRLRRSDISNIERARSRTLRMTI 278

Query: 122 IIVLTFFWCWTPYVIMTVW 140
            IV  + WC TPYVI+T+W
Sbjct: 279 TIVAVYVWCCTPYVIITMW 297

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270002847|gb|EEZ99294.1| hypothetical protein TcasGA2_TC001245 [Tribolium castaneum]

 Score =  100 bits (249), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 53/139 (38%), Positives = 77/139 (55%), Gaps = 20/139 (14%)

Query: 2   YIFHVASPPGHPNFTQCVSFNSFASDTHERYYNYFTVVVMYVIPMCIIVFSYFNIYVEVS 61
           ++F V + P +PN+ QCVSF  F +   E  YN   V+ MY IP+ +I+ +Y  I  E+S
Sbjct: 173 FVFRVRAHPKYPNYEQCVSFGFFENTAQEIAYNLMCVMCMYFIPLFVIIVAYTAIMCEIS 232

Query: 62  KRKGINFCGTNRALRGNIIDNSNVKLATVLDSTPGGTIRLRMNDVSNINKTRIRTLKMTV 121
           K         ++  +G     SN            G +RLR +D+SNI + R RTL+MT+
Sbjct: 233 K--------NSKETKGESYRTSN------------GRMRLRRSDISNIERARSRTLRMTI 272

Query: 122 IIVLTFFWCWTPYVIMTVW 140
            IV  + WC TPYVI+T+W
Sbjct: 273 TIVAVYVWCCTPYVIITMW 291

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	140
UNIPROTKB|F1NN71	371	CGNRH-R "Uncharacterized prote	0.471	0.177	0.417	2.2e-19
ZFIN|ZDB-GENE-090128-3	412	gnrhr2 "gonadotropin releasing	0.45	0.152	0.333	1e-18
ZFIN|ZDB-GENE-050419-76	406	gnrhr4 "gonadotropin releasing	0.45	0.155	0.365	1.1e-17
ZFIN|ZDB-GENE-090128-1	336	gnrhr3 "gonadotropin releasing	0.335	0.139	0.469	2.1e-17
UNIPROTKB|F1P1J8	345	GNRHR "Uncharacterized protein	0.464	0.188	0.338	3.4e-17
FB|FBgn0025595	455	GRHR "Gonadotropin-releasing h	0.442	0.136	0.338	1.3e-15
ZFIN|ZDB-GENE-090128-2	377	gnrhr1 "gonadotropin releasing	0.321	0.119	0.488	1.8e-15
UNIPROTKB|P32236	328	GNRHR "Gonadotropin-releasing	0.421	0.179	0.384	8.3e-15
UNIPROTKB|P49922	328	GNRHR "Gonadotropin-releasing	0.421	0.179	0.384	8.3e-15
UNIPROTKB|F8WBV1	286	GNRHR2 "Putative gonadotropin-	0.464	0.227	0.338	1.3e-14

UNIPROTKB|F1NN71 CGNRH-R "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 146 (56.5 bits), Expect = 2.2e-19, Sum P(2) = 2.2e-19
 Identities = 28/67 (41%), Positives = 41/67 (61%)

Query:     1 IYIFHVASPPGHPNFTQCVSFNSFASDTHERYYNYFTVVVMYVIPMCIIVFSYFNIYVEV 60
             +++FHV + PG  NFTQCV+  SF +   E  YN FT   +Y+ P+ I++  Y  I  E+
Sbjct:   169 LFLFHVHTVPGG-NFTQCVTHGSFRAHWEETVYNMFTFTTLYITPLSIMIVCYVRIIWEI 227

Query:    61 SKRKGIN 67
             SK+  IN
Sbjct:   228 SKQLKIN 234

GO:0004968 "gonadotropin-releasing hormone receptor activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-090128-3 gnrhr2 "gonadotropin releasing hormone receptor 2" [Danio rerio (taxid:7955)]

 Score = 129 (50.5 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
 Identities = 21/63 (33%), Positives = 37/63 (58%)

Query:     1 IYIFHVASPPGHPNFTQCVSFNSFASDTHERYYNYFTVVVMYVIPMCIIVFSYFNIYVEV 60
             +++FHV        F QC ++ SF+S   E +YN FT   ++++P+ I++  Y  I  E+
Sbjct:   178 VFVFHVVEIDSPKQFVQCTTYGSFSSRWQETFYNMFTFTFLFLLPLFIMISCYTRILFEI 237

Query:    61 SKR 63
             SK+
Sbjct:   238 SKK 240

GO:0004968 "gonadotropin-releasing hormone receptor activity" evidence=IEA;IDA

GO:0016021 "integral to membrane" evidence=IEA

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA;IDA

GO:0004930 "G-protein coupled receptor activity" evidence=IEA

GO:0097211 "cellular response to gonadotropin-releasing hormone" evidence=IDA

ZFIN|ZDB-GENE-050419-76 gnrhr4 "gonadotropin releasing hormone receptor 4" [Danio rerio (taxid:7955)]

 Score = 126 (49.4 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
 Identities = 23/63 (36%), Positives = 37/63 (58%)

Query:     1 IYIFHVASPPGHPNFTQCVSFNSFASDTHERYYNYFTVVVMYVIPMCIIVFSYFNIYVEV 60
             +++FH  +     NFTQC +  SF     E  YN FT + +++IP+ I++  Y  I VE+
Sbjct:   182 MFLFHNVTITVPANFTQCTTRGSFVKHWQETIYNMFTFICLFLIPLAIMICCYTRILVEI 241

Query:    61 SKR 63
             S+R
Sbjct:   242 SRR 244

GO:0004968 "gonadotropin-releasing hormone receptor activity" evidence=IEA;IDA

GO:0016021 "integral to membrane" evidence=IEA

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA;IDA

GO:0004930 "G-protein coupled receptor activity" evidence=IEA

GO:0097211 "cellular response to gonadotropin-releasing hormone" evidence=IDA

ZFIN|ZDB-GENE-090128-1 gnrhr3 "gonadotropin releasing hormone receptor 3" [Danio rerio (taxid:7955)]

 Score = 120 (47.3 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
 Identities = 23/49 (46%), Positives = 34/49 (69%)

Query:    92 DSTPGGTIRLRMNDVSNINKTRIRTLKMTVIIVLTFFWCWTPYVIMTVW 140
             +S  G ++R    D+  I K R++TLKMT+IIVL+F  CWTPY ++ +W
Sbjct:   223 NSNKGDSLRRSGTDM--IPKARMKTLKMTLIIVLSFVVCWTPYYLLGIW 269

GO:0004930 "G-protein coupled receptor activity" evidence=IEA

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA;IDA

GO:0016021 "integral to membrane" evidence=IEA

GO:0004968 "gonadotropin-releasing hormone receptor activity" evidence=IEA;IDA

GO:0097211 "cellular response to gonadotropin-releasing hormone" evidence=IDA

GO:0007165 "signal transduction" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

UNIPROTKB|F1P1J8 GNRHR "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 125 (49.1 bits), Expect = 3.4e-17, Sum P(2) = 3.4e-17
 Identities = 22/65 (33%), Positives = 37/65 (56%)

Query:     1 IYIFHVASPPGHPNFTQCVSFNSFASDTHERYYNYFTVVVMYVIPMCIIVFSYFNIYVEV 60
             +++FH  +     NFTQC +  SF    HE  YN  +   ++++P+ I+V  Y  I +E+
Sbjct:   148 LFLFHTVTLHAPHNFTQCTTHGSFPQPWHETLYNMLSFSCLFLLPLLIMVCCYTRILLEI 207

Query:    61 SKRKG 65
             S+R G
Sbjct:   208 SRRMG 212

GO:0004968 "gonadotropin-releasing hormone receptor activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

FB|FBgn0025595 GRHR "Gonadotropin-releasing hormone receptor" [Drosophila melanogaster (taxid:7227)]

 Score = 123 (48.4 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
 Identities = 21/62 (33%), Positives = 36/62 (58%)

Query:     2 YIFHVASPPGHPNFTQCVSFNSFASDTHERYYNYFTVVVMYVIPMCIIVFSYFNIYVEVS 61
             ++FH+   P    + QCV FNSF SD  E+ Y   ++  MY  P+ + ++ Y  IY+E+ 
Sbjct:   172 FLFHLEEHPAVTGYFQCVIFNSFRSDFDEKLYQAASMCSMYAFPLIMFIYCYGAIYLEIY 231

Query:    62 KR 63
             ++
Sbjct:   232 RK 233

GO:0016021 "integral to membrane" evidence=ISS;IDA

GO:0004968 "gonadotropin-releasing hormone receptor activity" evidence=ISS

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=ISS;NAS;IDA

GO:0008188 "neuropeptide receptor activity" evidence=ISS;NAS

GO:0097004 "adipokinetic hormone binding" evidence=IPI

GO:0097003 "adipokinetic hormone receptor activity" evidence=IDA

GO:0004930 "G-protein coupled receptor activity" evidence=ISS

GO:0005887 "integral to plasma membrane" evidence=ISS

GO:0001653 "peptide receptor activity" evidence=IDA

GO:0055088 "lipid homeostasis" evidence=IMP

GO:0016042 "lipid catabolic process" evidence=IMP

GO:0033500 "carbohydrate homeostasis" evidence=IMP

GO:0070328 "triglyceride homeostasis" evidence=IMP

ZFIN|ZDB-GENE-090128-2 gnrhr1 "gonadotropin releasing hormone receptor 1" [Danio rerio (taxid:7955)]

 Score = 121 (47.7 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
 Identities = 22/45 (48%), Positives = 30/45 (66%)

Query:    96 GGTIRLRMNDVSNINKTRIRTLKMTVIIVLTFFWCWTPYVIMTVW 140
             GG   LR +    I K R++TLKMT+IIV +F  CWTPY ++ +W
Sbjct:   243 GGEPCLRRSGADMIPKARMKTLKMTIIIVASFVVCWTPYYLLGIW 287

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA;IDA

GO:0016021 "integral to membrane" evidence=IEA

GO:0004930 "G-protein coupled receptor activity" evidence=IEA

GO:0004968 "gonadotropin-releasing hormone receptor activity" evidence=IEA;IDA

GO:0097211 "cellular response to gonadotropin-releasing hormone" evidence=IDA

GO:0007165 "signal transduction" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

UNIPROTKB|P32236 GNRHR "Gonadotropin-releasing hormone receptor" [Bos taurus (taxid:9913)]

 Score = 113 (44.8 bits), Expect = 8.3e-15, Sum P(2) = 8.3e-15
 Identities = 25/65 (38%), Positives = 38/65 (58%)

Query:    79 IIDNSNV--KLATVLDSTPGGTIRLRMNDV-SNINKTRIRTLKMTVIIVLTFFWCWTPYV 135
             +I N+ +   L  VL   P    +L++N   +NI + R+RTLKMTV    +F  CWTPY 
Sbjct:   228 VICNAKIIFTLTRVLHQDPH---KLQLNQSKNNIPRARLRTLKMTVAFATSFTVCWTPYY 284

Query:   136 IMTVW 140
             ++ +W
Sbjct:   285 VLGIW 289

GO:0005886 "plasma membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0004968 "gonadotropin-releasing hormone receptor activity" evidence=IEA

UNIPROTKB|P49922 GNRHR "Gonadotropin-releasing hormone receptor" [Sus scrofa (taxid:9823)]

 Score = 113 (44.8 bits), Expect = 8.3e-15, Sum P(2) = 8.3e-15
 Identities = 25/65 (38%), Positives = 37/65 (56%)

Query:    79 IIDNSNVK--LATVLDSTPGGTIRLRMNDV-SNINKTRIRTLKMTVIIVLTFFWCWTPYV 135
             +I N+ +   L  VL   P     L++N   +NI + R+RTLKMTV    +F  CWTPY 
Sbjct:   228 LICNAKIMFTLTRVLQQDPHN---LQLNQSKNNIPRARLRTLKMTVAFAASFIVCWTPYY 284

Query:   136 IMTVW 140
             ++ +W
Sbjct:   285 VLGIW 289

GO:0005886 "plasma membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0004968 "gonadotropin-releasing hormone receptor activity" evidence=IEA

UNIPROTKB|F8WBV1 GNRHR2 "Putative gonadotropin-releasing hormone II receptor" [Homo sapiens (taxid:9606)]

 Score = 110 (43.8 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
 Identities = 23/68 (33%), Positives = 36/68 (52%)

Query:     1 IYIFHVASPPGHPNFTQCVSFNSFASDTHERYYNYFTVVVMYVIPMCIIVFSYFNIYVEV 60
             +++FH     G   FTQCV+  SF +   E  YN FT   ++++P+  +   Y  I + V
Sbjct:    78 LFLFHTVHCAGPVPFTQCVTKGSFKAQWQETTYNLFTFCCLFLLPLTAMAICYSRIVLSV 137

Query:    61 SK---RKG 65
             S+   RKG
Sbjct:   138 SRPQTRKG 145

GO:0004968 "gonadotropin-releasing hormone receptor activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	140
pfam00001	251	pfam00001, 7tm_1, 7 transmembrane receptor (rhodop	7e-07

>gnl|CDD|215646 pfam00001, 7tm_1, 7 transmembrane receptor (rhodopsin family)

 Score = 46.5 bits (111), Expect = 7e-07
 Identities = 24/139 (17%), Positives = 46/139 (33%), Gaps = 35/139 (25%)

Query: 2   YIFHVASPPGHPNFTQCVSFNSFASDTHERYYNYFTVVVMYVIPMCIIVFSYFNIYVEVS 61
            +F         N T C     F  ++ +R Y   + ++ +V+P+ +I+  Y  I   + 
Sbjct: 114 LLFSWLRTVEEGNVTTC--LIDFPEESTKRSYTLLSTLLGFVLPLLVILVCYTLILRTLR 171

Query: 62  KRKGINFCGTNRALRGNIIDNSNVKLATVLDSTPGGTIRLRMNDVSNINKTRIRTLKMTV 121
           KR         R+         +                              +  KM +
Sbjct: 172 KR--------ARSGASQARAKRSS-------------------------SKERKAAKMLL 198

Query: 122 IIVLTFFWCWTPYVIMTVW 140
           ++V+ F  CW PY I+ + 
Sbjct: 199 VVVVVFVLCWLPYHIVLLL 217

This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins. Length = 251

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	140
2z73_A	448	Rhodopsin; visual pigment, GQ-type, G-protein coup	1e-09
2ks9_A	364	Substance-P receptor; water, autodock, NK1, neurop	1e-09
1u19_A	349	Rhodopsin; G protein-coupled receptor, membrane pr	2e-08
4ea3_A	434	Fusion protein of nociceptin receptor and cytochr;	3e-08
3sn6_R	514	Lysozyme, beta-2 adrenergic receptor; seven transm	4e-04

>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A* Length = 448

 Score = 54.2 bits (130), Expect = 1e-09
 Identities = 24/129 (18%), Positives = 43/129 (33%), Gaps = 25/129 (19%)

Query: 12  HPNFTQCVSFNSFASDTHERYYNYFTVVVMYVIPMCIIVFSYFNIYVEVSKRKGINFCGT 71
                 C SF+  + D+  R       ++ +  P+ II F YFNI + VS  +       
Sbjct: 180 EGVLCNC-SFDYISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMA 238

Query: 72  NRALRGNIIDNSNVKLATVLDSTPGGTIRLRMNDVSNINKTRIRTLKMTVIIVLTFFWCW 131
            R     +                                  +R  K++++IV  F   W
Sbjct: 239 KRLNAKELRKAQAGA------------------------NAEMRLAKISIVIVSQFLLSW 274

Query: 132 TPYVIMTVW 140
           +PY ++ + 
Sbjct: 275 SPYAVVALL 283

>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A Length = 364

 Score = 53.9 bits (130), Expect = 1e-09
 Identities = 20/129 (15%), Positives = 47/129 (36%), Gaps = 34/129 (26%)

Query: 13  PNFTQC-VSFNSFASDTHERYYNYFTVVVMYVIPMCIIVFSYFNIYVEVSKRKGINFCGT 71
           P+   C + +    +  +E+ Y+    V++Y +P+ +I ++Y  + + +   +       
Sbjct: 175 PSRVVCMIEWPEHPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASE------- 227

Query: 72  NRALRGNIIDNSNVKLATVLDSTPGGTIRLRMNDVSNINKTRIRTLKMTVIIVLTFFWCW 131
                                  PG       +        + + +KM +++V TF  CW
Sbjct: 228 ----------------------IPGD----SSDRYHEQVSAKRKVVKMMIVVVCTFAICW 261

Query: 132 TPYVIMTVW 140
            P+ I  + 
Sbjct: 262 LPFHIFFLL 270

>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ... Length = 349

 Score = 50.1 bits (120), Expect = 2e-08
 Identities = 22/149 (14%), Positives = 46/149 (30%), Gaps = 45/149 (30%)

Query: 1   IYIFHVASPPG--------HPNFTQC-VSFNSFASDTHERYYNYFTVVVMYVIPMCIIVF 51
           +     A+PP               C + + +   +T+   +  +  VV ++IP+ +I F
Sbjct: 163 VMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFF 222

Query: 52  SYFNIYVEVSKRKGINFCGTNRALRGNIIDNSNVKLATVLDSTPGGTIRLRMNDVSNINK 111
            Y  +   V +                                       +  + +   K
Sbjct: 223 CYGQLVFTVKE------------------------------------AAAQQQESATTQK 246

Query: 112 TRIRTLKMTVIIVLTFFWCWTPYVIMTVW 140
                 +M +I+V+ F  CW PY  +  +
Sbjct: 247 AEKEVTRMVIIMVIAFLICWLPYAGVAFY 275

>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A Length = 514

 Score = 38.4 bits (89), Expect = 4e-04
 Identities = 24/139 (17%), Positives = 47/139 (33%), Gaps = 11/139 (7%)

Query: 1   IYIFHVASPPGHPNFTQCVSFNSFASDTHERYYNYFTVVVMYVIPMCIIVFSYFNIYVEV 60
           + I        H     C +  +       + Y   + +V + +P+ I+VF Y  ++ E 
Sbjct: 316 LPIQMHWYRATHQEAINCYAEETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEA 375

Query: 61  SKRKGINFCGTNRALRGNIIDNSNVKLATVLDSTPGGTIRLRMNDVSNINKTRIRTLKMT 120
            ++           L+          +  +      G     +   S       + LK  
Sbjct: 376 KRQ-----------LQKIDKSEGRFHVQNLSQVEQDGRTGHGLRRSSKFCLKEHKALKTL 424

Query: 121 VIIVLTFFWCWTPYVIMTV 139
            II+ TF  CW P+ I+ +
Sbjct: 425 GIIMGTFTLCWLPFFIVNI 443

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	140
4grv_A	510	Neurotensin receptor type 1, lysozyme chimera; G-p	99.69
3odu_A	502	C-X-C chemokine receptor type 4, lysozyme chimera;	99.56
2rh1_A	500	Beta-2-adrenergic receptor/T4-lysozyme chimera; GP	99.52
3vw7_A	484	Proteinase-activated receptor 1, lysozyme; high re	99.51
4dkl_A	464	MU-type opioid receptor, lysozyme chimera; G-prote	99.49
2ks9_A	364	Substance-P receptor; water, autodock, NK1, neurop	99.48
3uon_A	467	Human M2 muscarinic acetylcholine, receptor T4 LY	99.48
3rze_A	452	Histamine H1 receptor, lysozyme chimera; structura	99.48
3sn6_R	514	Lysozyme, beta-2 adrenergic receptor; seven transm	99.47
3v2y_A	520	Sphingosine 1-phosphate receptor 1, lysozyme CHIM;	99.46
4amj_A	315	Beta-1 adrenergic receptor; membrane protein, 7TMR	99.42
2z73_A	448	Rhodopsin; visual pigment, GQ-type, G-protein coup	99.42
3eml_A	488	Human adenosine A2A receptor/T4 lysozyme chimera;	99.41
1u19_A	349	Rhodopsin; G protein-coupled receptor, membrane pr	99.39
4ea3_A	434	Fusion protein of nociceptin receptor and cytochr;	99.37
3pbl_A	481	D(3) dopamine receptor, lysozyme chimera; structur	99.36
4eiy_A	447	Adenosine receptor A2A/soluble cytochrome B562 CH;	99.27
2lnl_A	296	C-X-C chemokine receptor type 1; G protein coupled	99.26
2ki9_A	33	Cannabinoid receptor 2; GPCR, G-protein coupled re	99.14
2jx4_A	52	Vasopressin V2 receptor; protein, G-protein couple	80.51

>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}

Probab=99.69  E-value=6.1e-17  Score=120.97  Aligned_cols=38  Identities=11%  Similarity=0.109  Sum_probs=32.2

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy14644         28 THERYYNYFTVVVMYVIPMCIIVFSYFNIYVEVSKRKG   65 (140)
Q Consensus        28 ~~~~~y~~~~~~~~f~iP~~im~~~Y~~I~~~l~~~~~   65 (140)
                      .....|.++.+++.|++|+++|+++|.+|++.++++.+
T Consensus       200 ~~~~~~~~~~~~~~f~iP~~ii~~~Y~~I~~~l~~~~~  237 (510)
T 4grv_A          200 ATVKVVIQVNTFMSFLFPMLVISILNTVIANKLTVMVN  237 (510)
T ss_dssp             HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTSCT
T ss_pred             chhhhhhhhhhhHHHhhhHHHHHHHHHHHHHHHHHHhh
Confidence            44567777888899999999999999999999987543

>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*

Probab=99.56  E-value=1.5e-15  Score=112.37  Aligned_cols=53  Identities=15%  Similarity=0.231  Sum_probs=42.3

Q ss_pred             CCCcceeeeccccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q psy14644         13 PNFTQCVSFNSFASDTHERYYNYFTVVVMYVIPMCIIVFSYFNIYVEVSKRKGIN   67 (140)
Q Consensus        13 ~~~~~C~~~~~~~~~~~~~~y~~~~~~~~f~iP~~im~~~Y~~I~~~l~~~~~~~   67 (140)
                      .+...|  ...+++......|.+...++.|++|+++|+++|.+|++.++++.+..
T Consensus       191 ~~~~~C--~~~~~~~~~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~  243 (502)
T 3odu_A          191 DDRYIC--DRFYPNDLWVVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSGSNI  243 (502)
T ss_dssp             SSSEEE--EECCSSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHGGGCSCCH
T ss_pred             CCceEE--eecCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccch
Confidence            345578  44566666667788888889999999999999999999999876653

>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*

Probab=99.52  E-value=2.4e-14  Score=106.62  Aligned_cols=39  Identities=23%  Similarity=0.543  Sum_probs=34.0

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q psy14644         28 THERYYNYFTVVVMYVIPMCIIVFSYFNIYVEVSKRKGI   66 (140)
Q Consensus        28 ~~~~~y~~~~~~~~f~iP~~im~~~Y~~I~~~l~~~~~~   66 (140)
                      .....|.+...++.|++|+++|+++|.+|++.++++.+.
T Consensus       201 ~~~~~y~~~~~~~~~~iPl~ii~~~Y~~I~~~l~~~~~~  239 (500)
T 2rh1_A          201 FTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLNI  239 (500)
T ss_dssp             CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHCSH
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            345678888888999999999999999999999987665

>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}

Probab=99.51  E-value=7.8e-15  Score=108.10  Aligned_cols=50  Identities=20%  Similarity=0.363  Sum_probs=37.2

Q ss_pred             CCcceeeeccccCcc---cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy14644         14 NFTQCVSFNSFASDT---HERYYNYFTVVVMYVIPMCIIVFSYFNIYVEVSKRKG   65 (140)
Q Consensus        14 ~~~~C~~~~~~~~~~---~~~~y~~~~~~~~f~iP~~im~~~Y~~I~~~l~~~~~   65 (140)
                      +...|  ...++...   ....|.+...++.|++|+++|+++|.+|++.++++.+
T Consensus       168 ~~~~C--~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ii~~~Y~~I~~~l~~~~~  220 (484)
T 3vw7_A          168 GITTC--HDVLSETLLEGYYAYYFSAFSAVFFFVPLIISTVCYVSIIRCLSSSAN  220 (484)
T ss_dssp             TEEEE--SSSCSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC
T ss_pred             CCcee--eccCCccchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhHhhH
Confidence            44578  34444332   2334667777888999999999999999999998765

>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*

Probab=99.49  E-value=7.1e-15  Score=107.63  Aligned_cols=51  Identities=14%  Similarity=0.337  Sum_probs=38.0

Q ss_pred             CCCcceeeeccccCc--ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy14644         13 PNFTQCVSFNSFASD--THERYYNYFTVVVMYVIPMCIIVFSYFNIYVEVSKRKG   65 (140)
Q Consensus        13 ~~~~~C~~~~~~~~~--~~~~~y~~~~~~~~f~iP~~im~~~Y~~I~~~l~~~~~   65 (140)
                      .+...|.  ..+...  .....|.+..+++.|++|+++|+++|.+|++.++++.+
T Consensus       161 ~~~~~c~--~~~~~~~~~~~~~~~~~~~~~~~~~p~~ii~~~y~~i~~~l~~~~~  213 (464)
T 4dkl_A          161 QGSIDCT--LTFSHPTWYWENLLKICVFIFAFIMPVLIITVCYGLMILRLKSVRN  213 (464)
T ss_dssp             TTEEECC--BCCSSSHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHCCCCCS
T ss_pred             CCCceEE--eecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            4455673  333322  23556788888889999999999999999999987655

>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A

Probab=99.48  E-value=7.5e-14  Score=99.54  Aligned_cols=94  Identities=19%  Similarity=0.435  Sum_probs=67.5

Q ss_pred             CCCCCcceeeeccccCc---ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccCccccCCCcee
Q psy14644         11 GHPNFTQCVSFNSFASD---THERYYNYFTVVVMYVIPMCIIVFSYFNIYVEVSKRKGINFCGTNRALRGNIIDNSNVKL   87 (140)
Q Consensus        11 ~~~~~~~C~~~~~~~~~---~~~~~y~~~~~~~~f~iP~~im~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (140)
                      +.++...|.  ..+++.   .....|.+...++.|++|+++|+++|.+|++.++++......                  
T Consensus       173 ~~~~~~~C~--~~~~~~~~~~~~~~~~~~~~~~~~~lp~~ii~~~y~~i~~~l~~~~~~~~~------------------  232 (364)
T 2ks9_A          173 TMPSRVVCM--IEWPEHPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPGDS------------------  232 (364)
T ss_dssp             BCTTCSSBC--CCCSCCCTTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSCSCCCSSSS------------------
T ss_pred             ecCCCCEEe--ecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc------------------
Confidence            344556783  334432   234578888888899999999999999999988764332110                  


Q ss_pred             eeeccCCCCCCcccccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhhhhc
Q psy14644         88 ATVLDSTPGGTIRLRMNDVSNINKTRIRTLKMTVIIVLTFFWCWTPYVIMTV  139 (140)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~~vv~~F~icW~Py~i~~l  139 (140)
                                     ..+.+...++++|+++++++++++|++||+||++..+
T Consensus       233 ---------------~~~~~~~~~~~~k~~~~~~~v~~~f~~~~~P~~i~~~  269 (364)
T 2ks9_A          233 ---------------SDRYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFL  269 (364)
T ss_dssp             ---------------SSCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---------------chhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                           0111224566789999999999999999999988754

>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*

Probab=99.48  E-value=6.2e-14  Score=102.80  Aligned_cols=49  Identities=18%  Similarity=0.330  Sum_probs=37.6

Q ss_pred             CCCcceeeeccccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q psy14644         13 PNFTQCVSFNSFASDTHERYYNYFTVVVMYVIPMCIIVFSYFNIYVEVSKRKGI   66 (140)
Q Consensus        13 ~~~~~C~~~~~~~~~~~~~~y~~~~~~~~f~iP~~im~~~Y~~I~~~l~~~~~~   66 (140)
                      .+...|.  ..+.   ....|.+...++.|++|+++|+++|.+|++.++++.+.
T Consensus       171 ~~~~~C~--~~~~---~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~  219 (467)
T 3uon_A          171 VEDGECY--IQFF---SNAAVTFGTAIAAFYLPVIIMTVLYWHISRASKSRINI  219 (467)
T ss_dssp             CCSSCCC--CGGG---GSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCCCH
T ss_pred             CCCCcce--eecC---cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence            3445683  2222   34568888888999999999999999999999987653

>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}

Probab=99.48  E-value=1.9e-14  Score=105.08  Aligned_cols=48  Identities=19%  Similarity=0.504  Sum_probs=36.8

Q ss_pred             CCcceeeeccccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q psy14644         14 NFTQCVSFNSFASDTHERYYNYFTVVVMYVIPMCIIVFSYFNIYVEVSKRKGI   66 (140)
Q Consensus        14 ~~~~C~~~~~~~~~~~~~~y~~~~~~~~f~iP~~im~~~Y~~I~~~l~~~~~~   66 (140)
                      ....|.  ..+   .....|.++..++.|++|+++|+++|.+|++.++++.+.
T Consensus       157 ~~~~C~--~~~---~~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~  204 (452)
T 3rze_A          157 REDKCE--TDF---YDVTWFKVMTAIINFYLPTLLMLWFYAKIYKAVRQHCNI  204 (452)
T ss_dssp             CSSSSC--CSC---TTCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSCCCCCH
T ss_pred             CCCeec--CCC---cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH
Confidence            455672  223   234568888888999999999999999999999887554

>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*

Probab=99.47  E-value=6.1e-14  Score=104.68  Aligned_cols=101  Identities=22%  Similarity=0.378  Sum_probs=62.6

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccCccccCCCceeeeeccCCCCCCccccccccc
Q psy14644         28 THERYYNYFTVVVMYVIPMCIIVFSYFNIYVEVSKRKGINFCGTNRALRGNIIDNSNVKLATVLDSTPGGTIRLRMNDVS  107 (140)
Q Consensus        28 ~~~~~y~~~~~~~~f~iP~~im~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (140)
                      .....|.+...++.|++|+++|+++|.+|++.++++.++..............           ......+.....++..
T Consensus       343 ~~~~~y~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~  411 (514)
T 3sn6_R          343 FTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKIDKSEGRFHVQNLS-----------QVEQDGRTGHGLRRSS  411 (514)
T ss_dssp             CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC----------------------------------
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccc-----------cccccccccccccchh
Confidence            34567888889999999999999999999999998766543221110000000           0000000011111222


Q ss_pred             chhhHHHHHHHHHHHHHHHHHHhhhhhhhhhc
Q psy14644        108 NINKTRIRTLKMTVIIVLTFFWCWTPYVIMTV  139 (140)
Q Consensus       108 ~~~~~~~r~~~~l~~vv~~F~icW~Py~i~~l  139 (140)
                      ...++++|+++++++++++|++||+||.++.+
T Consensus       412 ~~~~~~~r~~~~l~~iv~~F~lcwlP~~i~~~  443 (514)
T 3sn6_R          412 KFCLKEHKALKTLGIIMGTFTLCWLPFFIVNI  443 (514)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34456789999999999999999999998765

>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*

Probab=99.46  E-value=1.7e-13  Score=102.61  Aligned_cols=47  Identities=21%  Similarity=0.426  Sum_probs=33.9

Q ss_pred             CCCcceeeeccccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy14644         13 PNFTQCVSFNSFASDTHERYYNYFTVVVMYVIPMCIIVFSYFNIYVEVSKRK   64 (140)
Q Consensus        13 ~~~~~C~~~~~~~~~~~~~~y~~~~~~~~f~iP~~im~~~Y~~I~~~l~~~~   64 (140)
                      .+...|  .+.++.  ....|.++ .++.|++|+++|++||.+|++.++++.
T Consensus       204 ~~~~~C--~~~~~~--~~~~~~~~-~~~~~~lPl~ii~~~Y~~I~~~l~~~~  250 (520)
T 3v2y_A          204 SALSSC--STVLPL--YHKHYILF-CTTVFTLLLLSIVILYCRIYSLVRTRN  250 (520)
T ss_dssp             TCGGGB--CSSSTT--BBHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCcc--cccCCc--cchHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            445578  334432  34455554 445699999999999999999999875

>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*

Probab=99.42  E-value=6e-14  Score=97.76  Aligned_cols=82  Identities=20%  Similarity=0.403  Sum_probs=59.9

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccCccccCCCceeeeeccCCCCCCccccccccc
Q psy14644         28 THERYYNYFTVVVMYVIPMCIIVFSYFNIYVEVSKRKGINFCGTNRALRGNIIDNSNVKLATVLDSTPGGTIRLRMNDVS  107 (140)
Q Consensus        28 ~~~~~y~~~~~~~~f~iP~~im~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (140)
                      .....|.+...++.|++|+++|+++|.+|++.++++.++....                              ..+...+
T Consensus       172 ~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~~~~~~~~~~~~------------------------------~~~~~~~  221 (315)
T 4amj_A          172 VTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRA------------------------------SKRKTSR  221 (315)
T ss_dssp             CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHTC------------------------------------------CH
T ss_pred             hcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcc------------------------------cccccch
Confidence            4566788888888899999999999999999999876543210                              0111122


Q ss_pred             chhhHHHHHHHHHHHHHHHHHHhhhhhhhhhc
Q psy14644        108 NINKTRIRTLKMTVIIVLTFFWCWTPYVIMTV  139 (140)
Q Consensus       108 ~~~~~~~r~~~~l~~vv~~F~icW~Py~i~~l  139 (140)
                      ...++++|+++++++++++|++||+||++..+
T Consensus       222 ~~~~~~~k~~~~~~~~~~~f~i~~~P~~i~~~  253 (315)
T 4amj_A          222 VMLMREHKALKTLGIIMGVFTLCWLPFFLVNI  253 (315)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            23456789999999999999999999998764

>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*

Probab=99.42  E-value=4.7e-14  Score=103.39  Aligned_cols=102  Identities=22%  Similarity=0.429  Sum_probs=67.4

Q ss_pred             CCCcceeeeccccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccCccccCCCceeeeecc
Q psy14644         13 PNFTQCVSFNSFASDTHERYYNYFTVVVMYVIPMCIIVFSYFNIYVEVSKRKGINFCGTNRALRGNIIDNSNVKLATVLD   92 (140)
Q Consensus        13 ~~~~~C~~~~~~~~~~~~~~y~~~~~~~~f~iP~~im~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (140)
                      +....|.. ++.........|.+...++.|++|+++|+++|.+|++.++++.++.......                   
T Consensus       181 ~~~~~c~~-~~~~~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~-------------------  240 (448)
T 2z73_A          181 GVLCNCSF-DYISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKR-------------------  240 (448)
T ss_dssp             TTSSSEEE-CCSCCSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTT-------------------
T ss_pred             CCceeEec-ccccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------------------
Confidence            34456742 2222233455677777788899999999999999999999876654311000                   


Q ss_pred             CCCCCCcccccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhhhhc
Q psy14644         93 STPGGTIRLRMNDVSNINKTRIRTLKMTVIIVLTFFWCWTPYVIMTV  139 (140)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~r~~~~l~~vv~~F~icW~Py~i~~l  139 (140)
                       . +   ....++.....++++|+++++++++++|++||+|++++.+
T Consensus       241 -~-~---~~~~~~~~~~~~~~~k~~~~l~~iv~~F~i~~~P~~i~~~  282 (448)
T 2z73_A          241 -L-N---AKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVAL  282 (448)
T ss_dssp             -T-C---CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -h-h---hHHHHhhhccccHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence             0 0   0000111123456789999999999999999999988764

>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*

Probab=99.41  E-value=5.8e-14  Score=103.36  Aligned_cols=38  Identities=18%  Similarity=0.495  Sum_probs=31.3

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q psy14644         30 ERYYNYFTVVVMYVIPMCIIVFSYFNIYVEVSKRKGIN   67 (140)
Q Consensus        30 ~~~y~~~~~~~~f~iP~~im~~~Y~~I~~~l~~~~~~~   67 (140)
                      ...|.++.+++.|++|+++|+++|.+|++.++++.+..
T Consensus       189 ~~~~~~~~~~~~~~~P~~ii~~~y~~I~~~l~~~~~~~  226 (488)
T 3eml_A          189 MNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLNIF  226 (488)
T ss_dssp             HHHHHTTTHHHHTHHHHHHHHHHHHHHHHHHTCCCCHH
T ss_pred             chhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence            34566666788899999999999999999999876553

>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...

Probab=99.39  E-value=6.6e-14  Score=99.03  Aligned_cols=75  Identities=23%  Similarity=0.565  Sum_probs=59.5

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccCccccCCCceeeeeccCCCCCCcccccccccc
Q psy14644         29 HERYYNYFTVVVMYVIPMCIIVFSYFNIYVEVSKRKGINFCGTNRALRGNIIDNSNVKLATVLDSTPGGTIRLRMNDVSN  108 (140)
Q Consensus        29 ~~~~y~~~~~~~~f~iP~~im~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (140)
                      ....|.+...++.+++|+++|+++|.+|++.++++.++..                                    +...
T Consensus       200 ~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~------------------------------------~~~~  243 (349)
T 1u19_A          200 NNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQ------------------------------------ESAT  243 (349)
T ss_dssp             THHHHHHHHHHHTTHHHHHHHHHHHTTTTTSSCSCCCSSC------------------------------------SSSH
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc------------------------------------cchh
Confidence            4567888888888999999999999999998876544321                                    1122


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHhhhhhhhhhc
Q psy14644        109 INKTRIRTLKMTVIIVLTFFWCWTPYVIMTV  139 (140)
Q Consensus       109 ~~~~~~r~~~~l~~vv~~F~icW~Py~i~~l  139 (140)
                      ..++++|+++++++++++|++||+||.+..+
T Consensus       244 ~~~~~~~~~~~~~~i~~~f~i~~~P~~i~~~  274 (349)
T 1u19_A          244 TQKAEKEVTRMVIIMVIAFLICWLPYAGVAF  274 (349)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence            4566789999999999999999999987654

>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}

Probab=99.36  E-value=2.1e-12  Score=95.06  Aligned_cols=36  Identities=25%  Similarity=0.530  Sum_probs=31.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q psy14644         31 RYYNYFTVVVMYVIPMCIIVFSYFNIYVEVSKRKGI   66 (140)
Q Consensus        31 ~~y~~~~~~~~f~iP~~im~~~Y~~I~~~l~~~~~~   66 (140)
                      ..|.+...++.|++|+++|+++|.+|++.++++.+.
T Consensus       195 ~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~  230 (481)
T 3pbl_A          195 PDFVIYSSVVSFYLPFGVTVLVYARIYVVLKQRRRK  230 (481)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence            347777888899999999999999999999987654

>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A

Probab=99.27  E-value=5.8e-13  Score=97.13  Aligned_cols=31  Identities=29%  Similarity=0.525  Sum_probs=27.5

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHhhhhhhhhhc
Q psy14644        109 INKTRIRTLKMTVIIVLTFFWCWTPYVIMTV  139 (140)
Q Consensus       109 ~~~~~~r~~~~l~~vv~~F~icW~Py~i~~l  139 (140)
                      ..++++|++||+++++++|++||+||+++.+
T Consensus       345 ~~~~~~r~~k~l~~vv~~F~icw~P~~i~~~  375 (447)
T 4eiy_A          345 TLQKEVHAAKSLAIIVGLFALCWLPLHIINC  375 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhhhheeccHHHHHHH
Confidence            3456789999999999999999999999865

>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}

Probab=99.26  E-value=3.8e-12  Score=88.54  Aligned_cols=70  Identities=17%  Similarity=0.452  Sum_probs=54.9

Q ss_pred             cCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccCccccCCCceeeeeccCCCCCCcccccc
Q psy14644         25 ASDTHERYYNYFTVVVMYVIPMCIIVFSYFNIYVEVSKRKGINFCGTNRALRGNIIDNSNVKLATVLDSTPGGTIRLRMN  104 (140)
Q Consensus        25 ~~~~~~~~y~~~~~~~~f~iP~~im~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (140)
                      ........|.+....+.+++|+.+|.++|.++.+.++++                                         
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~p~~i~~~~y~~i~~~~~~~-----------------------------------------  204 (296)
T 2lnl_A          166 DTAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKA-----------------------------------------  204 (296)
T ss_dssp             CTTTTTTHHHHTTTHHHHHHHHHHHHHHHHHHTTTSSSC-----------------------------------------
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------------------
Confidence            333455678888888999999999999999876544322                                         


Q ss_pred             cccchhhHHHHHHHHHHHHHHHHHHhhhhhhhhhc
Q psy14644        105 DVSNINKTRIRTLKMTVIIVLTFFWCWTPYVIMTV  139 (140)
Q Consensus       105 ~~~~~~~~~~r~~~~l~~vv~~F~icW~Py~i~~l  139 (140)
                          ..++++|++||+.+++++|++||+||+++.+
T Consensus       205 ----~~~~~~k~~~~~~~v~~~f~icw~P~~i~~~  235 (296)
T 2lnl_A          205 ----HMGQKHRAMRVIFAVVLIFLLCWLPYNLVLL  235 (296)
T ss_dssp             ----CCHHHHTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----hhhhhhhHHHHHHHhhhheeeeehHHHHHHH
Confidence                1234578999999999999999999998754

>2ki9_A Cannabinoid receptor 2; GPCR, G-protein coupled receptor, membrane protein; NMR {Synthetic}

Probab=99.14  E-value=3.1e-12  Score=60.70  Aligned_cols=27  Identities=19%  Similarity=0.550  Sum_probs=24.4

Q ss_pred             HHHHHHHHHHHHHHHHhhhhhhhhhcC
Q psy14644        114 IRTLKMTVIIVLTFFWCWTPYVIMTVW  140 (140)
Q Consensus       114 ~r~~~~l~~vv~~F~icW~Py~i~~l~  140 (140)
                      +|++|++++++++|++||+||++..++
T Consensus         2 ~k~~k~l~~vv~~F~icW~P~~i~~~~   28 (33)
T 2ki9_A            2 VRLAKTLGLVLAVLLICWFPVLALMAH   28 (33)
T ss_dssp             CSSSSHHHHHHHHHTTTSSHHHHHHTT
T ss_pred             chhhhhHHHHHHHHHHHHhHHHHHHHH
Confidence            578899999999999999999998764

>2jx4_A Vasopressin V2 receptor; protein, G-protein coupled receptor, glycoprotein, lipoprotein, membrane, palmitate, phosphorylation, receptor transducer; HET: DGN NLE CCS; NMR {Synthetic}

Probab=80.51  E-value=0.38  Score=24.30  Aligned_cols=14  Identities=14%  Similarity=0.012  Sum_probs=10.8

Q ss_pred             HHHHHHHHHhhhcc
Q psy14644         53 YFNIYVEVSKRKGI   66 (140)
Q Consensus        53 Y~~I~~~l~~~~~~   66 (140)
                      |.+|++.+|++.+.
T Consensus         2 y~~I~~~Iw~~~~~   15 (52)
T 2jx4_A            2 QVLIFREIHASLVP   15 (52)
T ss_dssp             CHHHHHHHHHHHTH
T ss_pred             eEEEEeHHHhhCCc
Confidence            67888888887653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	140
d1u19a_	348	Rhodopsin {Cow (Bos taurus) [TaxId: 9913]}	99.18

>d1u19a_ f.13.1.2 (A:) Rhodopsin {Cow (Bos taurus) [TaxId: 9913]}

class: Membrane and cell surface proteins and peptides
fold: Family A G protein-coupled receptor-like
superfamily: Family A G protein-coupled receptor-like
family: Rhodopsin-like
domain: Rhodopsin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.18  E-value=2.5e-12  Score=89.38  Aligned_cols=76  Identities=24%  Similarity=0.568  Sum_probs=59.4

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccCccccCCCceeeeeccCCCCCCccccccccc
Q psy14644         28 THERYYNYFTVVVMYVIPMCIIVFSYFNIYVEVSKRKGINFCGTNRALRGNIIDNSNVKLATVLDSTPGGTIRLRMNDVS  107 (140)
Q Consensus        28 ~~~~~y~~~~~~~~f~iP~~im~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (140)
                      .....|.+....+.+++|+++++++|.+|.+.++++.+..+                                    +..
T Consensus       198 ~~~~~~~~~~~~~~~~ip~~i~~~~y~~i~~~~~~~~~~~~------------------------------------~~~  241 (348)
T d1u19a_         198 TNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQ------------------------------------ESA  241 (348)
T ss_dssp             GTHHHHHHHHHHHTTHHHHHHHHHHHTTTTTSSCSCCCSSC------------------------------------SSS
T ss_pred             ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccc------------------------------------hhh
Confidence            34567777788888899999999999999887765543321                                    123


Q ss_pred             chhhHHHHHHHHHHHHHHHHHHhhhhhhhhhc
Q psy14644        108 NINKTRIRTLKMTVIIVLTFFWCWTPYVIMTV  139 (140)
Q Consensus       108 ~~~~~~~r~~~~l~~vv~~F~icW~Py~i~~l  139 (140)
                      ...++++|+++++++++++|++||+||.++.+
T Consensus       242 ~~~~~~~~~~~~~~~i~~~f~~~~~P~~i~~~  273 (348)
T d1u19a_         242 TTQKAEKEVTRMVIIMVIAFLICWLPYAGVAF  273 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHhhHhheEEEeehHHHHHhhHHHhhhh
Confidence            34567899999999999999999999987654