Psyllid ID: psy1464


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------
MFYACRSRRFLIGLICYFLSLIFRYLEYALTESLIRKQDAPRVFSLVSQSAVGHTVALDFLYNNWDRIKKHFNGTQFQVTSIVKFCTKRISNELELTQAESQAISLS
cccHHHHHHHHHHHccccHHHHHHHHHHHHcccccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHccccccHHHHHHHHHHHHHcc
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHcccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHccccHHHHHHHHHHHHccc
mfyacrsrRFLIGLICYFLSLIFRYLEYALTESlirkqdaprvfSLVSQSAVGHTVALDFLYNNWDRIKkhfngtqfQVTSIVKFCTKRISNELELTQAESQAISLS
mfyacrsrrFLIGLICYFLSLIFRYLEYALTESLIRKQDAPRVFSLVSQSAVGHTVALDFLYNNWDRIKKHFNGTQFQVTSIVKFCTKRISNEleltqaesqaisls
MFYACRSRRFLIGLICYFLSLIFRYLEYALTESLIRKQDAPRVFSLVSQSAVGHTVALDFLYNNWDRIKKHFNGTQFQVTSIVKFCTKRISNELELTQAESQAISLS
*FYACRSRRFLIGLICYFLSLIFRYLEYALTESLIRKQDAPRVFSLVSQSAVGHTVALDFLYNNWDRIKKHFNGTQFQVTSIVKFCTKRISN***************
*FYACRSRRFLIGLICYFLSLIFRYLEYALTESLIRKQDAPRVFSLVSQSAVGHTVALDFLYNNWDRIKKHFNGTQFQVTSIVKFCTKRISNELELTQAESQAI***
MFYACRSRRFLIGLICYFLSLIFRYLEYALTESLIRKQDAPRVFSLVSQSAVGHTVALDFLYNNWDRIKKHFNGTQFQVTSIVKFCTKRISNELELT**********
MFYACRSRRFLIGLICYFLSLIFRYLEYALTESLIRKQDAPRVFSLVSQSAVGHTVALDFLYNNWDRIKKHFNGTQFQVTSIVKFCTKRISNELELTQAESQAISLS
iiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MFYACRSRRFLIGLICYFLSLIFRYLEYALTESLIRKQDAPRVFSLVSQSAVGHTVALDFLYNNWDRIKKHFNGTQFQVTSIVKFCTKRISNELELTQAESQAISLS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query107 2.2.26 [Sep-21-2011]
P79098965 Aminopeptidase N OS=Bos t yes N/A 0.747 0.082 0.362 9e-12
P15145963 Aminopeptidase N OS=Sus s yes N/A 0.747 0.083 0.362 3e-11
P15541966 Aminopeptidase N OS=Oryct yes N/A 0.747 0.082 0.337 2e-10
P79171967 Aminopeptidase N OS=Felis N/A N/A 0.747 0.082 0.35 2e-10
P15684965 Aminopeptidase N OS=Rattu yes N/A 0.747 0.082 0.35 3e-10
P15144967 Aminopeptidase N OS=Homo yes N/A 0.766 0.084 0.341 5e-10
P97449966 Aminopeptidase N OS=Mus m yes N/A 0.747 0.082 0.325 2e-09
O57579967 Aminopeptidase N OS=Gallu yes N/A 0.719 0.079 0.337 6e-09
Q6Q4G3990 Aminopeptidase Q OS=Homo no N/A 0.719 0.077 0.287 0.0002
>sp|P79098|AMPN_BOVIN Aminopeptidase N OS=Bos taurus GN=ANPEP PE=2 SV=4 Back     alignment and function desciption
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 21  LIFRYLEYALTESLIRKQDAPRVFSLVSQSAVGHTVALDFLYNNWDRIKKHFNGTQFQVT 80
           L+ RYL Y L   LIRKQDA    + ++ + +G ++A DF+ +NW ++ + + G  F  +
Sbjct: 839 LLNRYLSYTLNPDLIRKQDATSTITSIASNVIGQSLAWDFIRSNWKKLFEDYGGGSFSFS 898

Query: 81  SIVKFCTKRISNELELTQAE 100
           ++++  T+R S E EL Q E
Sbjct: 899 NLIQGVTRRFSTEFELQQLE 918




Broad specificity aminopeptidase. Plays a role in the final digestion of peptides generated from hydrolysis of proteins by gastric and pancreatic proteases. May be involved in the metabolism of regulatory peptides of diverse cell types and in the cleavage of peptides bound to major histocompatibility complex class II molecules of antigen presenting cells. May have a role in angiogenesis (By similarity). May serve as a receptor for bovine coronavirus (BCV) in a species-specific manner.
Bos taurus (taxid: 9913)
EC: 3EC: .EC: 4EC: .EC: 1EC: 1EC: .EC: 2
>sp|P15145|AMPN_PIG Aminopeptidase N OS=Sus scrofa GN=ANPEP PE=1 SV=4 Back     alignment and function description
>sp|P15541|AMPN_RABIT Aminopeptidase N OS=Oryctolagus cuniculus GN=ANPEP PE=1 SV=4 Back     alignment and function description
>sp|P79171|AMPN_FELCA Aminopeptidase N OS=Felis catus GN=ANPEP PE=1 SV=3 Back     alignment and function description
>sp|P15684|AMPN_RAT Aminopeptidase N OS=Rattus norvegicus GN=Anpep PE=1 SV=2 Back     alignment and function description
>sp|P15144|AMPN_HUMAN Aminopeptidase N OS=Homo sapiens GN=ANPEP PE=1 SV=4 Back     alignment and function description
>sp|P97449|AMPN_MOUSE Aminopeptidase N OS=Mus musculus GN=Anpep PE=1 SV=4 Back     alignment and function description
>sp|O57579|AMPN_CHICK Aminopeptidase N OS=Gallus gallus GN=ANPEP PE=1 SV=1 Back     alignment and function description
>sp|Q6Q4G3|AMPQ_HUMAN Aminopeptidase Q OS=Homo sapiens GN=AQPEP PE=1 SV=4 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query107
347970422 1071 AGAP013001-PA [Anopheles gambiae str. PE 0.728 0.072 0.405 1e-10
345482582 982 PREDICTED: aminopeptidase N-like [Nasoni 0.710 0.077 0.441 1e-10
126273802 963 PREDICTED: aminopeptidase N-like [Monode 0.766 0.085 0.378 2e-10
390338619 1009 PREDICTED: aminopeptidase N isoform 1 [S 0.887 0.094 0.354 2e-10
390338617 1021 PREDICTED: aminopeptidase N isoform 2 [S 0.887 0.093 0.354 2e-10
62005833179 aminopeptidase N [Strongylocentrotus pur 0.887 0.530 0.354 3e-10
440906549 971 Aminopeptidase N, partial [Bos grunniens 0.747 0.082 0.362 4e-10
426248094 968 PREDICTED: LOW QUALITY PROTEIN: aminopep 0.747 0.082 0.362 4e-10
115495053 965 aminopeptidase N [Bos taurus] gi|1099198 0.747 0.082 0.362 4e-10
296475533 965 TPA: aminopeptidase N [Bos taurus] 0.747 0.082 0.362 4e-10
>gi|347970422|ref|XP_003436574.1| AGAP013001-PA [Anopheles gambiae str. PEST] gi|333468926|gb|EGK97116.1| AGAP013001-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
 Score = 70.9 bits (172), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/79 (40%), Positives = 52/79 (65%), Gaps = 1/79 (1%)

Query: 21   LIFRYLEYALTESL-IRKQDAPRVFSLVSQSAVGHTVALDFLYNNWDRIKKHFNGTQFQV 79
            ++ RYLE A+++   IRKQDA RVF  V+ + +G  +A D++ NNW ++K +F  +   +
Sbjct: 949  ILARYLENAMSDEYGIRKQDAFRVFISVADNVIGQPIAFDYMRNNWAKMKSYFGASMSNL 1008

Query: 80   TSIVKFCTKRISNELELTQ 98
              I+K+CTKR + E EL +
Sbjct: 1009 NIILKYCTKRFNTESELLE 1027




Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345482582|ref|XP_001608209.2| PREDICTED: aminopeptidase N-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|126273802|ref|XP_001369428.1| PREDICTED: aminopeptidase N-like [Monodelphis domestica] Back     alignment and taxonomy information
>gi|390338619|ref|XP_003724812.1| PREDICTED: aminopeptidase N isoform 1 [Strongylocentrotus purpuratus] Back     alignment and taxonomy information
>gi|390338617|ref|XP_783617.3| PREDICTED: aminopeptidase N isoform 2 [Strongylocentrotus purpuratus] Back     alignment and taxonomy information
>gi|62005833|gb|AAX59993.1| aminopeptidase N [Strongylocentrotus purpuratus] Back     alignment and taxonomy information
>gi|440906549|gb|ELR56800.1| Aminopeptidase N, partial [Bos grunniens mutus] Back     alignment and taxonomy information
>gi|426248094|ref|XP_004017800.1| PREDICTED: LOW QUALITY PROTEIN: aminopeptidase N [Ovis aries] Back     alignment and taxonomy information
>gi|115495053|ref|NP_001068612.1| aminopeptidase N [Bos taurus] gi|109919868|sp|P79098.4|AMPN_BOVIN RecName: Full=Aminopeptidase N; Short=AP-N; Short=bAPN; AltName: Full=Alanyl aminopeptidase; AltName: Full=Aminopeptidase M; Short=AP-M; AltName: Full=Microsomal aminopeptidase; AltName: CD_antigen=CD13 gi|75947603|gb|AAI05143.1| Alanyl (membrane) aminopeptidase [Bos taurus] Back     alignment and taxonomy information
>gi|296475533|tpg|DAA17648.1| TPA: aminopeptidase N [Bos taurus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query107
UNIPROTKB|F1MN84965 ANPEP "Aminopeptidase N" [Bos 0.747 0.082 0.362 1.4e-10
UNIPROTKB|P79098965 ANPEP "Aminopeptidase N" [Bos 0.747 0.082 0.362 1.4e-10
UNIPROTKB|F1SK03963 ANPEP "Aminopeptidase N" [Sus 0.747 0.083 0.362 3e-10
UNIPROTKB|P15145963 ANPEP "Aminopeptidase N" [Sus 0.747 0.083 0.362 3e-10
FB|FBgn0039640999 CG14516 [Drosophila melanogast 0.757 0.081 0.370 5.1e-10
RGD|2991965 Anpep "alanyl (membrane) amino 0.747 0.082 0.35 1.7e-09
UNIPROTKB|G3V7W7965 Anpep "Alanyl (Membrane) amino 0.747 0.082 0.35 1.7e-09
UNIPROTKB|P15144967 ANPEP "Aminopeptidase N" [Homo 0.766 0.084 0.341 2.7e-09
MGI|MGI:5000466966 Anpep "alanyl (membrane) amino 0.747 0.082 0.325 4.5e-09
ZFIN|ZDB-GENE-030131-1253965 anpepb "alanyl (membrane) amin 0.728 0.080 0.384 5.7e-09
UNIPROTKB|F1MN84 ANPEP "Aminopeptidase N" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
 Score = 161 (61.7 bits), Expect = 1.4e-10, P = 1.4e-10
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query:    21 LIFRYLEYALTESLIRKQDAPRVFSLVSQSAVGHTVALDFLYNNWDRIKKHFNGTQFQVT 80
             L+ RYL Y L   LIRKQDA    + ++ + +G ++A DF+ +NW ++ + + G  F  +
Sbjct:   839 LLNRYLSYTLNPDLIRKQDATSTITSIASNVIGQSLAWDFIRSNWKKLFEDYGGGSFSFS 898

Query:    81 SIVKFCTKRISNELELTQAE 100
             ++++  T+R S E EL Q E
Sbjct:   899 NLIQGVTRRFSTEFELQQLE 918




GO:0009897 "external side of plasma membrane" evidence=IEA
GO:0005793 "endoplasmic reticulum-Golgi intermediate compartment" evidence=IEA
GO:0008270 "zinc ion binding" evidence=IEA
GO:0008237 "metallopeptidase activity" evidence=IEA
GO:0006508 "proteolysis" evidence=IEA
UNIPROTKB|P79098 ANPEP "Aminopeptidase N" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1SK03 ANPEP "Aminopeptidase N" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|P15145 ANPEP "Aminopeptidase N" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
FB|FBgn0039640 CG14516 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
RGD|2991 Anpep "alanyl (membrane) aminopeptidase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|G3V7W7 Anpep "Alanyl (Membrane) aminopeptidase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|P15144 ANPEP "Aminopeptidase N" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:5000466 Anpep "alanyl (membrane) aminopeptidase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-1253 anpepb "alanyl (membrane) aminopeptidase b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 107
PF11838324 ERAP1_C: ERAP1-like C-terminal domain; InterPro: I 99.87
KOG1046|consensus882 99.67
TIGR02412831 pepN_strep_liv aminopeptidase N, Streptomyces livi 99.45
COG0308859 PepN Aminopeptidase N [Amino acid transport and me 95.95
PF06685249 DUF1186: Protein of unknown function (DUF1186); In 90.25
PF10805106 DUF2730: Protein of unknown function (DUF2730); In 89.93
cd0833082 CARD_ASC_NALP1 Caspase activation and recruitment 82.68
>PF11838 ERAP1_C: ERAP1-like C-terminal domain; InterPro: IPR024571 This entry represents the uncharacterised C-terminal domain of zinc metallopeptidases belonging to MEROPS peptidase family M1 (aminopeptidase N, clan MA), with a single member characterised in Streptomyces lividans: aminopeptidase G [] Back     alignment and domain information
Probab=99.87  E-value=1.2e-21  Score=137.40  Aligned_cols=103  Identities=27%  Similarity=0.407  Sum_probs=90.3

Q ss_pred             cHHHHHHHHHhhccC-cHHHHHHHHHHhhcCCCCCcCcHHHHHHHhc-CChhhHHHHHHHHHHHHHHHHHHhCCCchhHH
Q psy1464           3 YACRSRRFLIGLICY-FLSLIFRYLEYALTESLIRKQDAPRVFSLVS-QSAVGHTVALDFLYNNWDRIKKHFNGTQFQVT   80 (107)
Q Consensus         3 ~~~ek~~ll~AL~cs-d~~ll~~~L~~~l~~~~ir~qd~~~~~~~v~-~n~~g~~~~w~fl~~n~~~i~~~~~~~~~~l~   80 (107)
                      +++||..++.||||+ ||++++++|+++++++.++.||+..++.+++ .||.|++++|+|+++||+.|.++++++...+.
T Consensus       200 ~~~~k~~~l~aLa~~~d~~~~~~~l~~~l~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~n~~~i~~~~~~~~~~~~  279 (324)
T PF11838_consen  200 SPEEKRRLLSALACSPDPELLKRLLDLLLSNDKVRSQDIRYVLAGLASSNPVGRDLAWEFFKENWDAIIKKFGTNSSALS  279 (324)
T ss_dssp             THHHHHHHHHHHTT-S-HHHHHHHHHHHHCTSTS-TTTHHHHHHHHH-CSTTCHHHHHHHHHHCHHHHHCHC-TTSHCCH
T ss_pred             CHHHHHHHHHhhhccCCHHHHHHHHHHHcCCcccccHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHhcCCChHHH
Confidence            478999999999999 9999999999999976699999999999997 99999999999999999999999987655789


Q ss_pred             HHHHHhhcccCCHHHHHHHHHHHHh
Q psy1464          81 SIVKFCTKRISNELELTQAESQAIS  105 (107)
Q Consensus        81 ~~i~~~~~~~~t~~~~~~~~~f~~~  105 (107)
                      .++..+++.++|+++++++++||++
T Consensus       280 ~~~~~~~~~~~t~~~~~~~~~f~~~  304 (324)
T PF11838_consen  280 RVIKSFAGNFSTEEQLDELEEFFED  304 (324)
T ss_dssp             HHHHCCCTT--SHHHHHHHHHHHHH
T ss_pred             HHHHHHhccCCCHHHHHHHHHHHhh
Confidence            9999999999999999999999953



The rest of the members of this family are identified as aminopeptidase N of the actinomycete-type. The spectrum of activity may differ somewhat from the aminopeptidase N clade of Escherichia coli and most other proteobacteria, which are well separated phylogenetically within the M1 family. ; PDB: 3MDJ_A 2YD0_A 3QNF_C 3RJO_A 1Z5H_A 3Q7J_A 1Z1W_A 3SE6_B.

>KOG1046|consensus Back     alignment and domain information
>TIGR02412 pepN_strep_liv aminopeptidase N, Streptomyces lividans type Back     alignment and domain information
>COG0308 PepN Aminopeptidase N [Amino acid transport and metabolism] Back     alignment and domain information
>PF06685 DUF1186: Protein of unknown function (DUF1186); InterPro: IPR010602 This family consists of several hypothetical bacterial proteins of around 250 residues in length and is found in several Chlamydia and Anabaena species Back     alignment and domain information
>PF10805 DUF2730: Protein of unknown function (DUF2730); InterPro: IPR020269 This entry represents a family of various hypothetical proteins Back     alignment and domain information
>cd08330 CARD_ASC_NALP1 Caspase activation and recruitment domain found in Human ASC, NALP1, and similar proteins Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query107
4f5c_A959 Crystal Structure Of The Spike Receptor Binding Dom 2e-12
4h5h_A908 Crystal Structure Of Porcine Aminopeptidase-N Compl 2e-12
4fke_A909 Crystal Structure Of Porcine Aminopeptidase-N Lengt 2e-12
4hol_A908 Crystal Structure Of Porcine Aminopeptidase-N Compl 2e-12
4fyq_A903 Human Aminopeptidase N (Cd13) Length = 903 4e-11
3mdj_A921 Er Aminopeptidase, Erap1, Bound To The Zinc Aminope 3e-04
2yd0_A897 Crystal Structure Of The Soluble Domain Of Human En 3e-04
3qnf_A954 Crystal Structure Of The Open State Of Human Endopl 3e-04
3rjo_A419 Crystal Structure Of Erap1 Peptide Binding Domain L 4e-04
>pdb|4F5C|A Chain A, Crystal Structure Of The Spike Receptor Binding Domain Of A Porcine Respiratory Coronavirus In Complex With The Pig Aminopeptidase N Ectodomain Length = 959 Back     alignment and structure

Iteration: 1

Score = 67.4 bits (163), Expect = 2e-12, Method: Composition-based stats. Identities = 29/80 (36%), Positives = 49/80 (61%) Query: 21 LIFRYLEYALTESLIRKQDAPRVFSLVSQSAVGHTVALDFLYNNWDRIKKHFNGTQFQVT 80 L+ RYL Y L LIRKQDA + ++ + +G +A DF+ +NW ++ + + G F + Sbjct: 819 LLNRYLGYTLNPDLIRKQDATSTINSIASNVIGQPLAWDFVQSNWKKLFQDYGGGSFSFS 878 Query: 81 SIVKFCTKRISNELELTQAE 100 ++++ T+R S+E EL Q E Sbjct: 879 NLIQGVTRRFSSEFELQQLE 898
>pdb|4H5H|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed With Cleaved Poly-Alanine Length = 908 Back     alignment and structure
>pdb|4FKE|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Length = 909 Back     alignment and structure
>pdb|4HOL|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed With Poly- Alanine Length = 908 Back     alignment and structure
>pdb|4FYQ|A Chain A, Human Aminopeptidase N (Cd13) Length = 903 Back     alignment and structure
>pdb|3MDJ|A Chain A, Er Aminopeptidase, Erap1, Bound To The Zinc Aminopeptidase Inhibitor, Bestatin Length = 921 Back     alignment and structure
>pdb|2YD0|A Chain A, Crystal Structure Of The Soluble Domain Of Human Endoplasmic Reticulum Aminopeptidase 1 Erap1 Length = 897 Back     alignment and structure
>pdb|3QNF|A Chain A, Crystal Structure Of The Open State Of Human Endoplasmic Reticulum Aminopeptidase 1 Erap1 Length = 954 Back     alignment and structure
>pdb|3RJO|A Chain A, Crystal Structure Of Erap1 Peptide Binding Domain Length = 419 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query107
3rjo_A419 Endoplasmic reticulum aminopeptidase 1; ERAP1, hyd 9e-20
3se6_A967 Endoplasmic reticulum aminopeptidase 2; thermolysi 1e-18
2xdt_A897 Endoplasmic reticulum aminopeptidase 1; glycoprote 4e-18
1z5h_A780 Tricorn protease interacting factor F3; zinc amino 4e-15
>3rjo_A Endoplasmic reticulum aminopeptidase 1; ERAP1, hydrolase; 2.30A {Homo sapiens} Length = 419 Back     alignment and structure
 Score = 81.4 bits (201), Expect = 9e-20
 Identities = 17/82 (20%), Positives = 39/82 (47%)

Query: 20  SLIFRYLEYALTESLIRKQDAPRVFSLVSQSAVGHTVALDFLYNNWDRIKKHFNGTQFQV 79
             +   L+ +     I+ Q+ P++ +L+ ++ VG+ +A  FL  NW+++ + F      +
Sbjct: 284 EKLQWLLDESFKGDKIKTQEFPQILTLIGRNPVGYPLAWQFLRKNWNKLVQKFELGSSSI 343

Query: 80  TSIVKFCTKRISNELELTQAES 101
             +V   T + S    L + + 
Sbjct: 344 AHMVMGTTNQFSTRTRLEEVKG 365


>3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} Length = 967 Back     alignment and structure
>1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A* Length = 780 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query107
3rjo_A419 Endoplasmic reticulum aminopeptidase 1; ERAP1, hyd 99.94
3se6_A967 Endoplasmic reticulum aminopeptidase 2; thermolysi 99.91
2xdt_A897 Endoplasmic reticulum aminopeptidase 1; glycoprote 99.9
4fke_A909 Aminopeptidase N; zinc aminopeptidase, hydrolase; 99.89
1z5h_A780 Tricorn protease interacting factor F3; zinc amino 99.79
2gtq_A867 Aminopeptidase N; alanine aminopeptidase, M1 famil 91.14
3oao_A147 Uncharacterized protein from DUF2059 family; struc 86.97
3kat_A107 Nacht, LRR and PYD domains-containing protein 1; s 82.43
>3rjo_A Endoplasmic reticulum aminopeptidase 1; ERAP1, hydrolase; 2.30A {Homo sapiens} Back     alignment and structure
Probab=99.94  E-value=1.3e-26  Score=167.09  Aligned_cols=104  Identities=19%  Similarity=0.311  Sum_probs=98.5

Q ss_pred             cHHHHHHHHHhhccC-cHHHHHHHHHHhhcCCCCCcCcHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHhCCCchhHHH
Q psy1464           3 YACRSRRFLIGLICY-FLSLIFRYLEYALTESLIRKQDAPRVFSLVSQSAVGHTVALDFLYNNWDRIKKHFNGTQFQVTS   81 (107)
Q Consensus         3 ~~~ek~~ll~AL~cs-d~~ll~~~L~~~l~~~~ir~qd~~~~~~~v~~n~~g~~~~w~fl~~n~~~i~~~~~~~~~~l~~   81 (107)
                      +++||..++.||||+ ||++++++|+++++++.||+||+..++.+|++||.|++++|+|+++||+.|.++++.+.+.+++
T Consensus       266 ~~~ek~~ll~aL~~s~d~~ll~~~L~~~l~~~~ir~qD~~~~~~~v~~n~~g~~~aw~fl~~nw~~l~~~~~~~~~~~~~  345 (419)
T 3rjo_A          266 SSTEKSQIEFALCRTQNKEKLQWLLDESFKGDKIKTQEFPQILTLIGRNPVGYPLAWQFLRKNWNKLVQKFELGSSSIAH  345 (419)
T ss_dssp             CHHHHHHHHHHHTTCSCHHHHHHHHHHHHHTSSSCGGGHHHHHHHHHTSTTTHHHHHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred             CHHHHHHHHHHcCCCCCHHHHHHHHHHHhCCCCCchhHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhCcCchhHHH
Confidence            578999999999999 9999999999999887579999999999999999999999999999999999999876778999


Q ss_pred             HHHHhhcccCCHHHHHHHHHHHHhc
Q psy1464          82 IVKFCTKRISNELELTQAESQAISL  106 (107)
Q Consensus        82 ~i~~~~~~~~t~~~~~~~~~f~~~~  106 (107)
                      +|..++++|+|+++++++++||++.
T Consensus       346 ~i~~~~~~~~t~~~l~e~~~Ff~~~  370 (419)
T 3rjo_A          346 MVMGTTNQFSTRTRLEEVKGFFSSL  370 (419)
T ss_dssp             HHHHTTTTCCSHHHHHHHHHHHHTT
T ss_pred             HHHHHhhcCCCHHHHHHHHHHHHhC
Confidence            9999999999999999999999864



>3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} PDB: 4e36_A* Back     alignment and structure
>4fke_A Aminopeptidase N; zinc aminopeptidase, hydrolase; HET: NAG; 1.85A {Sus scrofa} PDB: 4fkh_A* 4fkk_A* 4fkn_A* 4fkf_A* 4f5c_A* 4fyt_A* 4fyr_A* 4fys_A* 4fyq_A* Back     alignment and structure
>1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A* Back     alignment and structure
>2gtq_A Aminopeptidase N; alanine aminopeptidase, M1 family peptidas PSI-2, structural genomics, protein structure initiative; 2.05A {Neisseria meningitidis} Back     alignment and structure
>3oao_A Uncharacterized protein from DUF2059 family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.72A {Pseudomonas aeruginosa} PDB: 2x3o_A Back     alignment and structure
>3kat_A Nacht, LRR and PYD domains-containing protein 1; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 3.10A {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00