Psyllid ID: psy14658


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300------
DDEEDHCHRERKNKNDKKARRKLWFASILCLVFMICEIVGGYFSGSLAIATDAAHLLTDFASFMISLIALWVASRPATKQMPFGWYRAEVVTGILLYIAIERVITKNFDIEPTIMLYTSVFGLIVNVLMGCTLHQHSHSHGGVREDVNVNVRAAFIHVLGDFLQSFGVFVAAVVIYFKPEWVLVDPICTFLFALLVLATTFTILRDIMIVLMEGIPRGVEFTDVLNTFLDIEGVEKVHNLRIWALSLDKAALSAHLAVKPGTDAGLILKQASRLVHTKFDFFEMTLQIEEFNATMEACDQCQSPAQ
cccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHcccccccccccEEEcccccccEEEEEEEEcccccHHHHHHHHHHHHHHHccccEEEEEccccccccccccccccccc
cccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHccccccEHccEEEEEEEccccEEEEEEEEcccccHHHHHHHHHHHHHHHcccEEEEEEEEccccccccHHHcccccc
ddeedhchrerknKNDKKARRKLWFASILCLVFMICEIvggyfsgsLAIATDAAHLLTDFASFMISLIALWVasrpatkqmpfgwyRAEVVTGILLYIAIERVitknfdieptIMLYTSVFGLIVNVLMGCTlhqhshshggvredvNVNVRAAFIHVLGDFLQSFGVFVAAVVIYfkpewvlvdpICTFLFALLVLATTFTILRDIMIVLMegiprgvefTDVLNTFLDIEGVEKVHNLRIWALSLDKAALSAHLavkpgtdaGLILKQASRlvhtkfdffEMTLQIEEFNATMEacdqcqspaq
ddeedhchrerknkndkkarrKLWFASILCLVFMICEIVGGYFSGSLAIATDAAHLLTDFASFMISLIALWVASRPATKQMPFGWYRAEVVTGILLYIAIERVITKNFDIEPTIMLYTSVFGLIVNVLMGCTLHQHSHSHGGVREDVNVNVRAAFIHVLGDFLQSFGVFVAAVVIYFKPEWVLVDPICTFLFALLVLATTFTILRDIMIVLMEGIPRGVEFTDVLNTFLDIEGVEKVHNLRIWALSLDKAALSAHLAVKPGTDAGLILKQASRLVHTKFDFFEMTLQIEEFNATMEACDQCQSPAQ
DDEEDHCHrerknkndkkarrkLWFASILCLVFMICEIVGGYFSGSLAIATDAAHLLTDFASFMISLIALWVASRPATKQMPFGWYRAEVVTGILLYIAIERVITKNFDIEPTIMLYTSVFGLIVNVLMGCTLHQHSHSHGGVREDVNVNVRAAFIHVLGDFLQSFGVFVAAVVIYFKPEWVLVDPICtflfallvlattftILRDIMIVLMEGIPRGVEFTDVLNTFLDIEGVEKVHNLRIWALSLDKAALSAHLAVKPGTDAGLILKQASRLVHTKFDFFEMTLQIEEFNATMEACDQCQSPAQ
*********************KLWFASILCLVFMICEIVGGYFSGSLAIATDAAHLLTDFASFMISLIALWVASRPATKQMPFGWYRAEVVTGILLYIAIERVITKNFDIEPTIMLYTSVFGLIVNVLMGCTLHQHSHSHGGVREDVNVNVRAAFIHVLGDFLQSFGVFVAAVVIYFKPEWVLVDPICTFLFALLVLATTFTILRDIMIVLMEGIPRGVEFTDVLNTFLDIEGVEKVHNLRIWALSLDKAALSAHLAVKPGTDAGLILKQASRLVHTKFDFFEMTLQIEEFNATMEA*********
**********************LWFASILCLVFMICEIVGGYFSGSLAIATDAAHLLTDFASFMISLIALWVASRPATKQMPFGWYRAEVVTGILLYIAIERVITKNFDIEPTIMLYTSVFGLIVNVLMGCTLH***************NVRAAFIHVLGDFLQSFGVFVAAVVIYFKPEWVLVDPICTFLFALLVLATTFTILRDIMIVLMEGIPRGVEFTDVLNTFLDIEGVEKVHNLRIWALSLDKAALSAHLAVKPGTDAGLILKQASRLVHTKFDFFEMTLQIEEFNAT************
******************ARRKLWFASILCLVFMICEIVGGYFSGSLAIATDAAHLLTDFASFMISLIALWVASRPATKQMPFGWYRAEVVTGILLYIAIERVITKNFDIEPTIMLYTSVFGLIVNVLMGCTLHQHSHSHGGVREDVNVNVRAAFIHVLGDFLQSFGVFVAAVVIYFKPEWVLVDPICTFLFALLVLATTFTILRDIMIVLMEGIPRGVEFTDVLNTFLDIEGVEKVHNLRIWALSLDKAALSAHLAVKPGTDAGLILKQASRLVHTKFDFFEMTLQIEEFNATMEA*********
***************DKKARRKLWFASILCLVFMICEIVGGYFSGSLAIATDAAHLLTDFASFMISLIALWVASRPATKQMPFGWYRAEVVTGILLYIAIERVITKNFDIEPTIMLYTSVFGLIVNVLMGCTLHQHS*********VNVNVRAAFIHVLGDFLQSFGVFVAAVVIYFKPEWVLVDPICTFLFALLVLATTFTILRDIMIVLMEGIPRGVEFTDVLNTFLDIEGVEKVHNLRIWALSLDKAALSAHLAVKPGTDAGLILKQASRLVHTKFDFFEMTLQIEEFNATMEACDQC*****
iiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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DDEEDHCHRERKNKNDKKARRKLWFASILCLVFMICEIVGGYFSGSLAIATDAAHLLTDFASFMISLIALWVASRPATKQMPFGWYRAEVVTGILLYIAIERVITKNFDIEPTIMLYTSVFGLIVNVLMGCTLHQHSHSHGGVREDVNVNVRAAFIHVLGDFLQSFGVFVAAVVIYFKPEWVLVDPICTFLFALLVLATTFTILRDIMIVLMEGIPRGVEFTDVLNTFLDIEGVEKVHNLRIWALSLDKAALSAHLAVKPGTDAGLILKQASRLVHTKFDFFEMTLQIEEFNATMEACDQCQSPAQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query306 2.2.26 [Sep-21-2011]
Q2HJ10371 Zinc transporter 2 OS=Mus yes N/A 0.977 0.805 0.534 1e-95
Q62941359 Zinc transporter 2 OS=Rat yes N/A 0.983 0.838 0.510 7e-92
Q5I020375 Zinc transporter 8 OS=Xen N/A N/A 1.0 0.816 0.433 2e-79
Q5XHB4374 Zinc transporter 8 OS=Xen no N/A 1.0 0.818 0.429 2e-79
Q5R617388 Zinc transporter 3 OS=Pon yes N/A 0.983 0.775 0.440 5e-75
Q99726388 Zinc transporter 3 OS=Hom no N/A 0.983 0.775 0.440 5e-75
Q08E25388 Zinc transporter 3 OS=Bos no N/A 0.983 0.775 0.431 7e-74
P97441388 Zinc transporter 3 OS=Mus no N/A 0.983 0.775 0.431 4e-73
Q6QIX3388 Zinc transporter 3 OS=Rat no N/A 0.983 0.775 0.431 8e-73
Q9BRI3323 Zinc transporter 2 OS=Hom no N/A 0.859 0.814 0.431 1e-69
>sp|Q2HJ10|ZNT2_MOUSE Zinc transporter 2 OS=Mus musculus GN=Slc30a2 PE=2 SV=1 Back     alignment and function desciption
 Score =  349 bits (896), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 172/322 (53%), Positives = 228/322 (70%), Gaps = 23/322 (7%)

Query: 6   HCHRER-----KNKNDKKARRKLWFASILCLVFMICEIVGGYFSGSLAIATDAAHLLTDF 60
           +CH ++      +   ++ARRKL+ AS +CLVFMI EI+GGY + SLAI TDAAHLLTDF
Sbjct: 48  YCHAQKDSGSHPDPEKQRARRKLYVASAICLVFMIGEIIGGYLAQSLAIMTDAAHLLTDF 107

Query: 61  ASFMISLIALWVASRPATKQMPFGWYRAE------------VVTGILLYIAIERVITKNF 108
           AS +ISL ALWV+SRPATK M FGW+RAE            VVTG+L+Y+A++R+I+ ++
Sbjct: 108 ASMLISLFALWVSSRPATKTMNFGWHRAEILGALLSVLSIWVVTGVLVYLAVQRLISGDY 167

Query: 109 DIEPTIMLYTSVFGLIVNVLMGCTLHQ--HSHSHGGVREDV----NVNVRAAFIHVLGDF 162
           +I+   ML TS   + VN++MG  LHQ  H HSHG  R+D     N +VRAAFIHV+GD 
Sbjct: 168 EIKGDTMLITSGCAVAVNLIMGLALHQSGHGHSHGNSRDDSSQQQNPSVRAAFIHVIGDL 227

Query: 163 LQSFGVFVAAVVIYFKPEWVLVDPICTFLFALLVLATTFTILRDIMIVLMEGIPRGVEFT 222
           LQS GV VAA +IYFKPE+  VDPICTFLF++LVL TT TILRD+++VLMEG P+GV+FT
Sbjct: 228 LQSVGVLVAAYIIYFKPEYKYVDPICTFLFSILVLGTTLTILRDVILVLMEGTPKGVDFT 287

Query: 223 DVLNTFLDIEGVEKVHNLRIWALSLDKAALSAHLAVKPGTDAGLILKQASRLVHTKFDFF 282
            V N  L ++GVE +H+L IWAL++ +  LS H+A+    DA  +LK A   +  KF+F 
Sbjct: 288 TVKNLLLSVDGVEALHSLHIWALTVAQPVLSVHIAIAQNADAQAVLKVARDRLQGKFNFH 347

Query: 283 EMTLQIEEFNATMEACDQCQSP 304
            MT+QIE+++  M+ C  CQ P
Sbjct: 348 TMTIQIEKYSEDMKNCQACQGP 369





Mus musculus (taxid: 10090)
>sp|Q62941|ZNT2_RAT Zinc transporter 2 OS=Rattus norvegicus GN=Slc30a2 PE=2 SV=1 Back     alignment and function description
>sp|Q5I020|ZNT8_XENLA Zinc transporter 8 OS=Xenopus laevis GN=slc30a8 PE=2 SV=1 Back     alignment and function description
>sp|Q5XHB4|ZNT8_XENTR Zinc transporter 8 OS=Xenopus tropicalis GN=slc30a8 PE=2 SV=1 Back     alignment and function description
>sp|Q5R617|ZNT3_PONAB Zinc transporter 3 OS=Pongo abelii GN=SLC30A3 PE=2 SV=1 Back     alignment and function description
>sp|Q99726|ZNT3_HUMAN Zinc transporter 3 OS=Homo sapiens GN=SLC30A3 PE=2 SV=2 Back     alignment and function description
>sp|Q08E25|ZNT3_BOVIN Zinc transporter 3 OS=Bos taurus GN=SLC30A3 PE=2 SV=1 Back     alignment and function description
>sp|P97441|ZNT3_MOUSE Zinc transporter 3 OS=Mus musculus GN=Slc30a3 PE=1 SV=1 Back     alignment and function description
>sp|Q6QIX3|ZNT3_RAT Zinc transporter 3 OS=Rattus norvegicus GN=Slc30a3 PE=2 SV=1 Back     alignment and function description
>sp|Q9BRI3|ZNT2_HUMAN Zinc transporter 2 OS=Homo sapiens GN=SLC30A2 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query306
357616078 489 hypothetical protein KGM_21119 [Danaus p 0.990 0.619 0.607 1e-118
307180025 1949 UDP-glucose:glycoprotein glucosyltransfe 0.990 0.155 0.629 1e-115
328697045 517 PREDICTED: zinc transporter 2-like [Acyr 0.983 0.582 0.622 1e-115
328786702 1975 PREDICTED: UDP-glucose:glycoprotein gluc 0.990 0.153 0.614 1e-114
380017904 1999 PREDICTED: UDP-glucose:glycoprotein gluc 0.986 0.151 0.611 1e-113
321478036 467 hypothetical protein DAPPUDRAFT_191209 [ 0.980 0.642 0.591 1e-112
307194730404 Zinc transporter 2 [Harpegnathos saltato 0.980 0.742 0.605 1e-112
350423463 1959 PREDICTED: UDP-glucose:glycoprotein gluc 0.990 0.154 0.610 1e-111
383863213 1932 PREDICTED: UDP-glucose:glycoprotein gluc 0.990 0.156 0.588 1e-111
345491819 424 PREDICTED: zinc transporter 2-like [Naso 0.983 0.709 0.570 1e-111
>gi|357616078|gb|EHJ69997.1| hypothetical protein KGM_21119 [Danaus plexippus] Back     alignment and taxonomy information
 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 214/352 (60%), Positives = 258/352 (73%), Gaps = 49/352 (13%)

Query: 3   EEDHCHRERKNKNDKKARRKLWFASILCLVFMICEIVGGYFSGSLAIATDAAHLLTDFAS 62
           EE HCHR R  + DK+ARRKL  AS+LC++FMI EIVGGY S SLAIATDAAHLLTDFAS
Sbjct: 137 EERHCHRSRNEEIDKRARRKLIIASVLCVIFMIGEIVGGYLSNSLAIATDAAHLLTDFAS 196

Query: 63  FMISLIALWVASRPATKQMPFGWYRAEV------------VTGILLYIAIERVITKNFDI 110
           FMISL +LWVASRPAT++MPFGWYRAEV            VTGILLY+A++RVI K+F+I
Sbjct: 197 FMISLFSLWVASRPATRRMPFGWYRAEVIGALTSVLLIWVVTGILLYMAVQRVIYKSFEI 256

Query: 111 EPTIMLYTSVFGLIVNVLMGCTLHQHSHSHG----------GV------REDV------- 147
           + T+ML TS  G+ VN++MG TLHQH HSHG          G       +E V       
Sbjct: 257 DATVMLITSAVGVAVNLVMGLTLHQHGHSHGGQAGHGHSHGGANPVLNNKERVDSDAESS 316

Query: 148 --------------NVNVRAAFIHVLGDFLQSFGVFVAAVVIYFKPEWVLVDPICTFLFA 193
                         N+NVRAAFIHVLGDFLQSFGV VAA+VIYFKPEW LVDPICTFLF+
Sbjct: 317 SSHTQEVHSHTHGENINVRAAFIHVLGDFLQSFGVLVAAIVIYFKPEWSLVDPICTFLFS 376

Query: 194 LLVLATTFTILRDIMIVLMEGIPRGVEFTDVLNTFLDIEGVEKVHNLRIWALSLDKAALS 253
           +LVL TT+ I++D ++VLMEG PRGV+F +V NTFL + GV +VHNLR+WALSLDK AL+
Sbjct: 377 VLVLLTTYNIIKDALLVLMEGSPRGVDFQEVANTFLSLPGVVRVHNLRMWALSLDKTALA 436

Query: 254 AHLAVKPGTDAGLILKQASRLVHTKFDFFEMTLQIEEFNATMEACDQCQSPA 305
           AHLA++ G     +L+QA+RLVH K++FFEMTLQIEEF+  ME C QC+ P+
Sbjct: 437 AHLAIRSGVSPQKVLEQATRLVHEKYNFFEMTLQIEEFSDVMEQCRQCEMPS 488




Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307180025|gb|EFN68101.1| UDP-glucose:glycoprotein glucosyltransferase [Camponotus floridanus] Back     alignment and taxonomy information
>gi|328697045|ref|XP_001948187.2| PREDICTED: zinc transporter 2-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|328786702|ref|XP_395660.4| PREDICTED: UDP-glucose:glycoprotein glucosyltransferase [Apis mellifera] Back     alignment and taxonomy information
>gi|380017904|ref|XP_003692883.1| PREDICTED: UDP-glucose:glycoprotein glucosyltransferase-like [Apis florea] Back     alignment and taxonomy information
>gi|321478036|gb|EFX88994.1| hypothetical protein DAPPUDRAFT_191209 [Daphnia pulex] Back     alignment and taxonomy information
>gi|307194730|gb|EFN76966.1| Zinc transporter 2 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|350423463|ref|XP_003493490.1| PREDICTED: UDP-glucose:glycoprotein glucosyltransferase-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|383863213|ref|XP_003707076.1| PREDICTED: UDP-glucose:glycoprotein glucosyltransferase-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|345491819|ref|XP_001607657.2| PREDICTED: zinc transporter 2-like [Nasonia vitripennis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query306
FB|FBgn0028516472 ZnT35C [Drosophila melanogaste 0.549 0.355 0.535 1.9e-83
UNIPROTKB|E2RBS9371 SLC30A2 "Uncharacterized prote 0.924 0.762 0.508 3.9e-76
ZFIN|ZDB-GENE-041014-347398 slc30a2 "solute carrier family 0.552 0.424 0.449 5.2e-75
FB|FBgn0051860669 CG31860 [Drosophila melanogast 0.598 0.273 0.491 5.9e-75
ZFIN|ZDB-GENE-060315-10388 slc30a8 "solute carrier family 0.565 0.445 0.422 1.8e-72
UNIPROTKB|F1PTQ3369 SLC30A8 "Uncharacterized prote 0.921 0.764 0.377 4e-58
UNIPROTKB|Q8IWU4369 SLC30A8 "Zinc transporter 8" [ 0.911 0.756 0.381 4e-58
RGD|1308282368 Slc30a8 "solute carrier family 0.911 0.758 0.388 1.1e-57
UNIPROTKB|Q9BRI3323 SLC30A2 "Zinc transporter 2" [ 0.705 0.668 0.484 2e-57
MGI|MGI:2442682367 Slc30a8 "solute carrier family 0.908 0.757 0.388 3.6e-57
FB|FBgn0028516 ZnT35C [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 460 (167.0 bits), Expect = 1.9e-83, Sum P(2) = 1.9e-83
 Identities = 91/170 (53%), Positives = 116/170 (68%)

Query:   137 SHSHGGV--REDVNVNVRAAFIHVLGDFLQSFGVFVAAVVIYFKPEWVLVDPICXXXXXX 194
             SH HGG   RE VN+NVRAA IHV+GD +QS GVFVAA VIYF PE+ +VDPIC      
Sbjct:   301 SHHHGGPVGREAVNMNVRAALIHVIGDVIQSVGVFVAAGVIYFWPEYSIVDPICTFVFSI 360

Query:   195 XXXXXXXXILRDIMIVLMEGIPRGVEFTDVLNTFLDIEGVEKVHNLRIWALSLDKAALSA 254
                     I++D ++VLMEG P  + + +VL  F  IEGVE+VHNLRIWALS++K ALSA
Sbjct:   361 IVLFTTFTIMKDALLVLMEGTPNYMHYAEVLQIFQGIEGVERVHNLRIWALSINKVALSA 420

Query:   255 HLAVKPGTDAGLILKQASRLVHTKFDFFEMTLQIEEFNATMEACDQCQSP 304
             HLA+    +   IL  A+  VH +++FFE T+QIE++ A ME+C QC  P
Sbjct:   421 HLAIAENANPKRILDAATSAVHLRYNFFETTIQIEDYTAQMESCLQCNVP 470


GO:0005385 "zinc ion transmembrane transporter activity" evidence=ISS
GO:0046873 "metal ion transmembrane transporter activity" evidence=ISS
GO:0006812 "cation transport" evidence=IEA
GO:0016021 "integral to membrane" evidence=IEA
GO:0055085 "transmembrane transport" evidence=IEA
GO:0010043 "response to zinc ion" evidence=IMP
UNIPROTKB|E2RBS9 SLC30A2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-041014-347 slc30a2 "solute carrier family 30 (zinc transporter), member 2" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
FB|FBgn0051860 CG31860 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-060315-10 slc30a8 "solute carrier family 30 (zinc transporter), member 8" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1PTQ3 SLC30A8 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q8IWU4 SLC30A8 "Zinc transporter 8" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|1308282 Slc30a8 "solute carrier family 30 (zinc transporter), member 8" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q9BRI3 SLC30A2 "Zinc transporter 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:2442682 Slc30a8 "solute carrier family 30 (zinc transporter), member 8" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8ZGY6ZITB_YERPENo assigned EC number0.27450.91830.9006yesN/A
Q5R617ZNT3_PONABNo assigned EC number0.44010.98360.7757yesN/A
A7Z1S6CZCD_BACA2No assigned EC number0.30590.93790.9169yesN/A
Q6D7E5ZITB_ERWCTNo assigned EC number0.29800.88880.85yesN/A
Q8ZQT3ZITB_SALTYNo assigned EC number0.330.89540.8782yesN/A
Q9ZT63MTP1_ARATHNo assigned EC number0.33910.87900.6758yesN/A
Q2HJ10ZNT2_MOUSENo assigned EC number0.53410.97710.8059yesN/A
O07084CZCD_BACSUNo assigned EC number0.32550.77770.7652yesN/A
Q66D85ZITB_YERPSNo assigned EC number0.27120.91830.9006yesN/A
Q62941ZNT2_RATNo assigned EC number0.51070.98360.8384yesN/A
P13512CZCD_RALMENo assigned EC number0.34750.88880.8607yesN/A
Q83SA2ZITB_SHIFLNo assigned EC number0.33910.86600.8466yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query306
TIGR01297268 TIGR01297, CDF, cation diffusion facilitator famil 1e-74
COG1230296 COG1230, CzcD, Co/Zn/Cd efflux system component [I 5e-65
PRK03557312 PRK03557, PRK03557, zinc transporter ZitB; Provisi 1e-43
pfam01545273 pfam01545, Cation_efflux, Cation efflux family 2e-43
COG0053304 COG0053, MMT1, Predicted Co/Zn/Cd cation transport 3e-29
>gnl|CDD|233348 TIGR01297, CDF, cation diffusion facilitator family transporter Back     alignment and domain information
 Score =  229 bits (587), Expect = 1e-74
 Identities = 98/274 (35%), Positives = 149/274 (54%), Gaps = 24/274 (8%)

Query: 32  VFMICEIVGGYFSGSLAIATDAAHLLTDFASFMISLIALWVASRPATKQMPFGWYRAE-- 89
           + M+ +IVGG  SGSLA+  DA H L+D A+  I+L+AL ++ RPA ++ PFG  RAE  
Sbjct: 1   LLMLIKIVGGLLSGSLALLADAIHSLSDVAASAIALLALRISRRPADERHPFGHGRAEIL 60

Query: 90  ----------VVTGILLYIAIERVITKNFDIEPTIMLYTSVFGLIVNVLMGCTLHQHSHS 139
                     VV   +LY AIER+I    +I+   ML  ++ GLIVN+++   LH+  H 
Sbjct: 61  AALLNGLFLVVVALFILYEAIERLINPEPEIDGGTMLIVAIVGLIVNLILALYLHRVGHR 120

Query: 140 HGGVREDVNVNVRAAFIHVLGDFLQSFGVFVAAVVIYFKPEWVLVDPICTFLFALLVLAT 199
            G      ++ +RAA +HVL D L S GV + A++IYF   W   DPI   L +LL+L T
Sbjct: 121 LG------SLALRAAALHVLSDALSSVGVLIGALLIYFG--WHWADPIAALLISLLILYT 172

Query: 200 TFTILRDIMIVLMEGIPRGVEFTDVLNTFLDIEGVEKVHNLRIWALSLDKAALSAHLAVK 259
            F +L++ + VL++  P   +  ++    L I GV+ VH+L IW +   K  L  H+ V 
Sbjct: 173 AFRLLKESINVLLDAAPDEEDLEEIKKAILSIPGVKGVHDLHIWRIGPGKLFLDVHVVVD 232

Query: 260 PGTDA----GLILKQASRLVHTKFDFFEMTLQIE 289
           P  D      + L+    ++        +T+Q+E
Sbjct: 233 PDLDLKQAHDIALEIEREILKRHPGIEHVTIQVE 266


This model describes a broadly distributed family of transporters, a number of which have been shown to transport divalent cations of cobalt, cadmium and/or zinc. The family has six predicted transmembrane domains. Members of the family are variable in length because of variably sized inserts, often containing low-complexity sequence [Transport and binding proteins, Cations and iron carrying compounds]. Length = 268

>gnl|CDD|224151 COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|235130 PRK03557, PRK03557, zinc transporter ZitB; Provisional Back     alignment and domain information
>gnl|CDD|216561 pfam01545, Cation_efflux, Cation efflux family Back     alignment and domain information
>gnl|CDD|223131 COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 306
PRK03557312 zinc transporter ZitB; Provisional 100.0
COG0053304 MMT1 Predicted Co/Zn/Cd cation transporters [Inorg 100.0
COG1230296 CzcD Co/Zn/Cd efflux system component [Inorganic i 100.0
PRK09509299 fieF ferrous iron efflux protein F; Reviewed 100.0
TIGR01297268 CDF cation diffusion facilitator family transporte 100.0
KOG1482|consensus379 100.0
PF01545284 Cation_efflux: Cation efflux family; InterPro: IPR 100.0
KOG1484|consensus354 100.0
KOG1483|consensus404 100.0
KOG1485|consensus412 100.0
COG3965314 Predicted Co/Zn/Cd cation transporters [Inorganic 99.97
KOG2802|consensus503 99.88
COG0053 304 MMT1 Predicted Co/Zn/Cd cation transporters [Inorg 97.53
PRK09509299 fieF ferrous iron efflux protein F; Reviewed 97.04
PRK03557 312 zinc transporter ZitB; Provisional 96.77
TIGR01297268 CDF cation diffusion facilitator family transporte 96.47
KOG1485|consensus 412 95.84
COG1230296 CzcD Co/Zn/Cd efflux system component [Inorganic i 94.97
PF1453596 AMP-binding_C_2: AMP-binding enzyme C-terminal dom 92.15
PF01545284 Cation_efflux: Cation efflux family; InterPro: IPR 90.23
KOG1484|consensus 354 86.08
TIGR03406174 FeS_long_SufT probable FeS assembly SUF system pro 85.66
COG4858226 Uncharacterized membrane-bound protein conserved i 82.57
PF03780108 Asp23: Asp23 family; InterPro: IPR005531 This entr 82.49
PF09580177 Spore_YhcN_YlaJ: Sporulation lipoprotein YhcN/YlaJ 80.82
KOG1483|consensus 404 80.23
PF0188372 DUF59: Domain of unknown function DUF59; InterPro: 80.09
>PRK03557 zinc transporter ZitB; Provisional Back     alignment and domain information
Probab=100.00  E-value=1.1e-54  Score=392.56  Aligned_cols=276  Identities=32%  Similarity=0.583  Sum_probs=251.5

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhhchHHHHHhhHHHHhhHHHHHHHHHHHHHHcCCCCCCCCCcchHHHHHH------
Q psy14658         19 ARRKLWFASILCLVFMICEIVGGYFSGSLAIATDAAHLLTDFASFMISLIALWVASRPATKQMPFGWYRAEVVT------   92 (306)
Q Consensus        19 ~~~~l~~~~~~~~~~~i~~i~~g~~~~S~allaDa~~sl~d~~~~~~~l~~~~~s~~~~~~~~p~G~~r~e~v~------   92 (306)
                      .+|++++++++|++++++|+++|+++||.||++||+||+.|+++++++++++++++||||++|||||+|+|+++      
T Consensus        17 ~~r~~~~~~~~n~~l~i~k~~~g~~tgS~AllaDa~hsl~D~~~~~~~l~a~~~s~kp~d~~hpyG~~r~E~l~al~~~~   96 (312)
T PRK03557         17 NARRLLYAFGVTAGFMLVEVIGGFLSGSLALLADAGHMLTDAAALLFALLAVQFSRRPPTIRHTFGWLRLTTLAAFVNAI   96 (312)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHHHHHH
Confidence            47788889999999999999999999999999999999999999999999999999999999999999999933      


Q ss_pred             ------HHHHHHHHHHhhcCCCcCchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCccccchhHHHHHHHHHHHHHHHH
Q psy14658         93 ------GILLYIAIERVITKNFDIEPTIMLYTSVFGLIVNVLMGCTLHQHSHSHGGVREDVNVNVRAAFIHVLGDFLQSF  166 (306)
Q Consensus        93 ------~~i~~~si~~l~~~~~~~~~~~~l~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~s~~l~a~~~~~~~D~~~s~  166 (306)
                            .+++++|+.++++|.+ .+..++++++++++++|.+.++++++.       ++.+|.+++++++|++.|+++|+
T Consensus        97 ~l~~~~~~i~~eai~~l~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~-------~~~~s~~l~a~~~h~~~D~l~s~  168 (312)
T PRK03557         97 ALVVITILIVWEAIERFRTPRP-VAGGMMMAIAVAGLLANILSFWLLHHG-------SEEKNLNVRAAALHVLGDLLGSV  168 (312)
T ss_pred             HHHHHHHHHHHHHHHHHcCCcc-ccchHHHHHHHHHHHHHHHHHHHHhcc-------cccCCHHHHHHHHHHHHHHHHHH
Confidence                  3457999999998864 445567778889999999888877652       45567889999999999999999


Q ss_pred             HHHHHHHHHHhcCCCeecchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCHHHHHHHh-cCCcCccccceeEEEee
Q psy14658        167 GVFVAAVVIYFKPEWVLVDPICTFLFALLVLATTFTILRDIMIVLMEGIPRGVEFTDVLNTF-LDIEGVEKVHNLRIWAL  245 (306)
Q Consensus       167 ~v~i~~~~~~~~~~~~~~D~~~si~i~~~i~~~~~~~~~~s~~~Ll~~~p~~~~~~~i~~~i-~~~~~v~~v~~~~~~~~  245 (306)
                      +++++.++..+ +||+|+||++++++++++++.+++++|+++++|||++|++++.+++++.+ ++.|+|.+++++|+|+.
T Consensus       169 ~vlv~~~~~~~-~g~~~~Dpi~~ilis~~i~~~~~~l~~~~~~~Lld~~p~~~~~~~i~~~i~~~~~gV~~vh~l~~~~~  247 (312)
T PRK03557        169 GAIIAALIIIW-TGWTPADPILSILVSVLVLRSAWRLLKESVNELLEGAPVSLDIAELKRRLCREIPEVRNVHHVHVWMV  247 (312)
T ss_pred             HHHHHHHHHHH-cCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCHHHHHHHHHhcCCCceeEEEEEEEEe
Confidence            99999988877 89999999999999999999999999999999999999988899999887 57999999999999999


Q ss_pred             cCCeEEEEEEEEeCCCCCHHHHHHHHHHHHhhhCCCceeEEEeeecCCCcccCCccCCC
Q psy14658        246 SLDKAALSAHLAVKPGTDAGLILKQASRLVHTKFDFFEMTLQIEEFNATMEACDQCQSP  304 (306)
Q Consensus       246 ~~~~~~v~v~i~~~~~~~~~~i~~~i~~~l~~~~~v~~v~i~i~p~~~~~~~~~~~~~~  304 (306)
                      | +.+++++|+.++++.+.++++++++++|++++++.++|||+||.+...+.|+.|++-
T Consensus       248 G-~~~~v~~hv~v~~~~~~~~i~~~i~~~l~~~~~i~~vtIh~e~~~~~~~~~~~~~~~  305 (312)
T PRK03557        248 G-EKPVMTLHVQVIPPHDHDALLDRIQDYLMHHYQIEHATIQMEYQPCHGPDCHLNQGV  305 (312)
T ss_pred             C-CeEEEEEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEEEeccCcCCCcchhhhhhh
Confidence            6 788999999999999999999999999999999999999999988788888888864



>COG0053 MMT1 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK09509 fieF ferrous iron efflux protein F; Reviewed Back     alignment and domain information
>TIGR01297 CDF cation diffusion facilitator family transporter Back     alignment and domain information
>KOG1482|consensus Back     alignment and domain information
>PF01545 Cation_efflux: Cation efflux family; InterPro: IPR002524 Members of this family are integral membrane proteins, that are found to increase tolerance to divalent metal ions such as cadmium, zinc, and cobalt Back     alignment and domain information
>KOG1484|consensus Back     alignment and domain information
>KOG1483|consensus Back     alignment and domain information
>KOG1485|consensus Back     alignment and domain information
>COG3965 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG2802|consensus Back     alignment and domain information
>COG0053 MMT1 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK09509 fieF ferrous iron efflux protein F; Reviewed Back     alignment and domain information
>PRK03557 zinc transporter ZitB; Provisional Back     alignment and domain information
>TIGR01297 CDF cation diffusion facilitator family transporter Back     alignment and domain information
>KOG1485|consensus Back     alignment and domain information
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B Back     alignment and domain information
>PF01545 Cation_efflux: Cation efflux family; InterPro: IPR002524 Members of this family are integral membrane proteins, that are found to increase tolerance to divalent metal ions such as cadmium, zinc, and cobalt Back     alignment and domain information
>KOG1484|consensus Back     alignment and domain information
>TIGR03406 FeS_long_SufT probable FeS assembly SUF system protein SufT Back     alignment and domain information
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PF03780 Asp23: Asp23 family; InterPro: IPR005531 This entry represents the alkaline shock protein 23 family Back     alignment and domain information
>PF09580 Spore_YhcN_YlaJ: Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ); InterPro: IPR019076 This entry contains YhcN and YlaJ, which are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis Back     alignment and domain information
>KOG1483|consensus Back     alignment and domain information
>PF01883 DUF59: Domain of unknown function DUF59; InterPro: IPR002744 This family includes prokaryotic proteins of unknown function Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query306
3h90_A283 Ferrous-iron efflux pump FIEF; membrane protein, z 2e-24
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-06
>3h90_A Ferrous-iron efflux pump FIEF; membrane protein, zinc transporter, cell inner membrane, cell membrane, ION transport, iron transport; 2.90A {Escherichia coli k-12} PDB: 2qfi_A Length = 283 Back     alignment and structure
 Score = 98.8 bits (247), Expect = 2e-24
 Identities = 37/236 (15%), Positives = 92/236 (38%), Gaps = 20/236 (8%)

Query: 19  ARRKLWFASILCLVFMICEIVGGYFSGSLAIATDAAHLLTDFASFMISLIALWVASRPAT 78
             R    A+ +  + ++ +I   +++GS++I       L D  + + +L+ +  + +PA 
Sbjct: 2   VSRAAIAATAMASLLLLIKIFAWWYTGSVSILAALVDSLVDIGASLTNLLVVRYSLQPAD 61

Query: 79  KQMPFGWYRAE-----------VVTGI-LLYIAIERVITKNFDIEPTIMLYTSVFGLIVN 126
               FG  +AE             + + L    I+ +I+     +P + +  ++  LI  
Sbjct: 62  DNHSFGHGKAESLAALAQSMFISGSALFLFLTGIQHLISPTPMTDPGVGVIVTIVALICT 121

Query: 127 VLMGCTLHQHSHSHGGVREDVNVNVRAAFIHVLGDFLQSFGVFVAAVVIYFKPEWVLVDP 186
           +++                  +  VRA  +H   D + +  + +A  + ++   W   D 
Sbjct: 122 IILVSFQRWVVRRTQ------SQAVRADMLHYQSDVMMNGAILLALGLSWYG--WHRADA 173

Query: 187 ICTFLFALLVLATTFTILRDIMIVLMEGIPRGVEFTDVLNTFLDIEGVEKVHNLRI 242
           +      + +L +   +  + +  L++      E  ++++      GV   H+LR 
Sbjct: 174 LFALGIGIYILYSALRMGYEAVQSLLDRALPDEERQEIIDIVTSWPGVSGAHDLRT 229


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query306
3j1z_P306 YIIP, cation efflux family protein; zinc transport 100.0
3h90_A283 Ferrous-iron efflux pump FIEF; membrane protein, z 100.0
3byp_A94 CZRB protein; membrane protein, zinc transporter, 99.45
2zzt_A107 Putative uncharacterized protein; cation diffusion 99.38
3h90_A283 Ferrous-iron efflux pump FIEF; membrane protein, z 96.62
3j1z_P 306 YIIP, cation efflux family protein; zinc transport 96.59
3cq1_A103 Putative uncharacterized protein TTHB138; DTDP-4-k 87.65
1uwd_A103 Hypothetical protein TM0487; similar to PAAD prote 86.61
3lno_A108 Putative uncharacterized protein; alpha-beta fold, 84.41
>3j1z_P YIIP, cation efflux family protein; zinc transporter, secondary transporter, alternating access mechanism, metal transport; 13.00A {Shewanella oneidensis} Back     alignment and structure
Probab=100.00  E-value=4.8e-54  Score=386.98  Aligned_cols=273  Identities=17%  Similarity=0.199  Sum_probs=251.8

Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHHHHhhchHHHHHhhHHHHhhHHHHHHHHHHHHHHcCCCCCCCCCcchHHHHHH---
Q psy14658         16 DKKARRKLWFASILCLVFMICEIVGGYFSGSLAIATDAAHLLTDFASFMISLIALWVASRPATKQMPFGWYRAEVVT---   92 (306)
Q Consensus        16 ~~~~~~~l~~~~~~~~~~~i~~i~~g~~~~S~allaDa~~sl~d~~~~~~~l~~~~~s~~~~~~~~p~G~~r~e~v~---   92 (306)
                      ....|++.++++++|++++++|+++|+++||.||++||+||++|+++.++++++.+.++||||++|||||+|+|+++   
T Consensus         8 ~~~vr~a~~~si~~n~~l~~~k~~ag~~sgS~ALlaDa~hsl~D~~s~~i~l~~~~~s~k~~d~~~pyG~~R~E~l~al~   87 (306)
T 3j1z_P            8 DFWVKLASRASVATALTLITIKLLAWLYSGSASMLASLTDSFADTLASIINFIAIRYAIVPADHDHRYGHGKAEPLAALA   87 (306)
T ss_dssp             TCCSSTTHHHHHHHHHHHTHHHHHTCTTSSSSCCCTHHHHTTHHHHHHHHHHHHHHHHTSCCCCTTSSCCTTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCchhhHHHHHHHH
Confidence            34568889999999999999999999999999999999999999999999999999999999999999999999933   


Q ss_pred             ---------HHHHHHHHHHhhcCCCcCchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCccccchhHHHHHHHHHHHHH
Q psy14658         93 ---------GILLYIAIERVITKNFDIEPTIMLYTSVFGLIVNVLMGCTLHQHSHSHGGVREDVNVNVRAAFIHVLGDFL  163 (306)
Q Consensus        93 ---------~~i~~~si~~l~~~~~~~~~~~~l~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~s~~l~a~~~~~~~D~~  163 (306)
                               ++++++++.++++|++...+.+++++++++++++..++++.++.      .++.+|.+++++++|.+.|++
T Consensus        88 ~~~~l~~~~~~i~~eai~~l~~p~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~------~~~~~s~~l~a~~~h~~~D~l  161 (306)
T 3j1z_P           88 QSAFIMGSAFLLLFYGGERLLNPSPVENATLGVVVSVVAIVLTLALVLLQKRA------LAATNSTVVEADSLHYKSDLF  161 (306)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTTCCGGGTTCCHHHHHHHHHHHHHHHHHHHHH------HTTSCCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHhhhheecCCCccccccchhhhhhHhhhhHHHHHHHHHh------ccccCCHHHHHHHHhhcchhh
Confidence                     34679999999999877777788889999999999999998876      356789999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCeecchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCHHHHHHHhcCCcCccccceeEEE
Q psy14658        164 QSFGVFVAAVVIYFKPEWVLVDPICTFLFALLVLATTFTILRDIMIVLMEGIPRGVEFTDVLNTFLDIEGVEKVHNLRIW  243 (306)
Q Consensus       164 ~s~~v~i~~~~~~~~~~~~~~D~~~si~i~~~i~~~~~~~~~~s~~~Ll~~~p~~~~~~~i~~~i~~~~~v~~v~~~~~~  243 (306)
                      +|+++++++++.++  ||+|+||++++++++++++.+++++|++...|||++|++++.++|++.+++.|+|.++|++|+|
T Consensus       162 ~s~~vli~~~~~~~--g~~~~Dpi~ai~Ia~~I~~~~~~l~~~s~~~Ll~~~~~~~~~~~I~~~i~~~~~V~~vh~l~~~  239 (306)
T 3j1z_P          162 LNAAVLLALVLSQY--GWWWADGLFAVLIACYIGQQAFDLGYRSIQALLDRELDEDTRQRIKLIAKEDPRVLGLHDLRTR  239 (306)
T ss_dssp             CCTTCCCTTSSCCS--SSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHSTTBCCCCCBCCE
T ss_pred             hhhHHHHHHHHHHh--CcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchhHHHHHHHHHhcCCCcceeeeEEEE
Confidence            99999998777654  9999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eecCCeEEEEEEEEeCCCC---CHHHHHHHHHHHHhhhCCCceeEEEeeecCCCccc
Q psy14658        244 ALSLDKAALSAHLAVKPGT---DAGLILKQASRLVHTKFDFFEMTLQIEEFNATMEA  297 (306)
Q Consensus       244 ~~~~~~~~v~v~i~~~~~~---~~~~i~~~i~~~l~~~~~v~~v~i~i~p~~~~~~~  297 (306)
                      +.| +++.+++|+++|+++   +++++.++++++|++++++.+++||+||++.++-+
T Consensus       240 ~~G-~~~~v~~hi~v~~~~sl~eah~i~~~ie~~l~~~~~~~~v~IhveP~~~ePt~  295 (306)
T 3j1z_P          240 QAG-KTVFIQFHLELDGNLSLNEAHSITDTTGLRVKAAFEDAEVIIHQDPVQVEPTT  295 (306)
T ss_dssp             EET-TEEEEEECCEECTTSBHHHHHHHHHHHHHHHHHHSTTCEEEECCEETTSCCCC
T ss_pred             EEC-CcEEEEEEEEECCCCCHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCCCCCCCc
Confidence            987 678899999999997   68999999999999999999999999999765433



>3h90_A Ferrous-iron efflux pump FIEF; membrane protein, zinc transporter, cell inner membrane, cell membrane, ION transport, iron transport; 2.90A {Escherichia coli k-12} PDB: 2qfi_A Back     alignment and structure
>3byp_A CZRB protein; membrane protein, zinc transporter, transport protein; 1.70A {Thermus thermophilus} SCOP: d.52.9.1 PDB: 3byr_A Back     alignment and structure
>2zzt_A Putative uncharacterized protein; cation diffusion facilitator (CDF), transporter, zinc, membrane protein, cytosolic domain; 2.84A {Thermotoga maritima} Back     alignment and structure
>3h90_A Ferrous-iron efflux pump FIEF; membrane protein, zinc transporter, cell inner membrane, cell membrane, ION transport, iron transport; 2.90A {Escherichia coli k-12} PDB: 2qfi_A Back     alignment and structure
>3j1z_P YIIP, cation efflux family protein; zinc transporter, secondary transporter, alternating access mechanism, metal transport; 13.00A {Shewanella oneidensis} Back     alignment and structure
>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A* Back     alignment and structure
>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A Back     alignment and structure
>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 306
d2qfia2204 f.59.1.1 (A:5-208) Ferrous-iron efflux pump FieF { 4e-29
>d2qfia2 f.59.1.1 (A:5-208) Ferrous-iron efflux pump FieF {Escherichia coli [TaxId: 562]} Length = 204 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Cation efflux protein transmembrane domain-like
superfamily: Cation efflux protein transmembrane domain-like
family: Cation efflux protein transmembrane domain-like
domain: Ferrous-iron efflux pump FieF
species: Escherichia coli [TaxId: 562]
 Score =  108 bits (271), Expect = 4e-29
 Identities = 31/209 (14%), Positives = 81/209 (38%), Gaps = 20/209 (9%)

Query: 17  KKARRKLWFASILCLVFMICEIVGGYFSGSLAIATDAAHLLTDFASFMISLIALWVASRP 76
           +   R    A+ +  + ++ +I   +++GS++I       L D  + + +L+ +  + +P
Sbjct: 3   RLVSRAAIAATAMASLLLLIKIFAWWYTGSVSILAALVDSLVDIGASLTNLLVVRYSLQP 62

Query: 77  ATKQMPFGWYRAEVVT------------GILLYIAIERVITKNFDIEPTIMLYTSVFGLI 124
           A     FG  +AE +               L    I+ +I+     +P + +  ++  LI
Sbjct: 63  ADDNHSFGHGKAESLAALAQSMFISGSALFLFLTGIQHLISPTPMTDPGVGVIVTIVALI 122

Query: 125 VNVLMGCTLHQHSHSHGGVREDVNVNVRAAFIHVLGDFLQSFGVFVAAVVIYFKPEWVLV 184
             +++                  +  VRA  +H   D + +  + +A  + ++   W   
Sbjct: 123 CTIILVSFQRWVVRRT------QSQAVRADMLHYQSDVMMNGAILLALGLSWYG--WHRA 174

Query: 185 DPICTFLFALLVLATTFTILRDIMIVLME 213
           D +      + +L +   +  + +  L++
Sbjct: 175 DALFALGIGIYILYSALRMGYEAVQSLLD 203


Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query306
d2qfia2204 Ferrous-iron efflux pump FieF {Escherichia coli [T 99.97
d2qfia182 Ferrous-iron efflux pump FieF (YiiP) {Escherichia 99.29
d3bypa182 Putative Zinc transporter CzrB {Thermus thermophil 99.26
d2cu6a191 Hypothetical protein TTHB138 {Thermus thermophilus 91.87
d1uwda_102 Hypothetical protein TM0487 {Thermotoga maritima [ 89.85
>d2qfia2 f.59.1.1 (A:5-208) Ferrous-iron efflux pump FieF {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Cation efflux protein transmembrane domain-like
superfamily: Cation efflux protein transmembrane domain-like
family: Cation efflux protein transmembrane domain-like
domain: Ferrous-iron efflux pump FieF
species: Escherichia coli [TaxId: 562]
Probab=99.97  E-value=2.5e-38  Score=266.78  Aligned_cols=190  Identities=17%  Similarity=0.328  Sum_probs=174.1

Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHhhchHHHHHhhHHHHhhHHHHHHHHHHHHHHcCCCCCCCCCcchHHHHHHHH--
Q psy14658         17 KKARRKLWFASILCLVFMICEIVGGYFSGSLAIATDAAHLLTDFASFMISLIALWVASRPATKQMPFGWYRAEVVTGI--   94 (306)
Q Consensus        17 ~~~~~~l~~~~~~~~~~~i~~i~~g~~~~S~allaDa~~sl~d~~~~~~~l~~~~~s~~~~~~~~p~G~~r~e~v~~~--   94 (306)
                      |..+|++++++++|++++++|+++|+++||.+|++||+|++.|+++.++.+++.+.++||||++|||||+|.|+++.+  
T Consensus         3 r~~~r~~~~~~~~n~~l~i~~~~~~~~t~S~allada~~s~~D~~~~~~~l~~~~~s~k~~d~~~pyG~~r~E~l~~l~~   82 (204)
T d2qfia2           3 RLVSRAAIAATAMASLLLLIKIFAWWYTGSVSILAALVDSLVDIGASLTNLLVVRYSLQPADDNHSFGHGKAESLAALAQ   82 (204)
T ss_dssp             SSSSTTSHHHHGGGTTTTTBTTBCCCCTTSSCCCCCCCTTHHHHHHHHHHHHHHTTSSSSCSTTSSCSCCTHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccCCcchhHHHHHHHHHH
Confidence            578899999999999999999999999999999999999999999999999999999999999999999999995543  


Q ss_pred             ----------HHHHHHHHhhcCCCcCchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCccccchhHHHHHHHHHHHHHH
Q psy14658         95 ----------LLYIAIERVITKNFDIEPTIMLYTSVFGLIVNVLMGCTLHQHSHSHGGVREDVNVNVRAAFIHVLGDFLQ  164 (306)
Q Consensus        95 ----------i~~~si~~l~~~~~~~~~~~~l~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~s~~l~a~~~~~~~D~~~  164 (306)
                                ++++++.++++|++..+++.++++++++.+++.++.++.++.      .++.+|++++++++|++.|+++
T Consensus        83 ~~~l~~~~~~~~~~si~~l~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~~~------~~~~~s~~~~a~~~~~~~D~~~  156 (204)
T d2qfia2          83 SMFISGSALFLFLTGIQHLISPTPMTDPGVGVIVTIVALICTIILVSFQRWV------VRRTQSQAVRADMLHYQSDVMM  156 (204)
T ss_dssp             TTTTSSSTTGGGSSCTTSSTTTSSSSTTTSCCCCCGGGSSCGGGGTTTHHHH------GGGCCSTTSGGGGGGHHHHTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHHHHHHHh------hcccchhhhHHHHHHHHHHHHH
Confidence                      568899999999877777777777888888888888887776      4677899999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCeecchhhHHHHHHHHHHHhHHHHHHHHHHHhcC
Q psy14658        165 SFGVFVAAVVIYFKPEWVLVDPICTFLFALLVLATTFTILRDIMIVLMEG  214 (306)
Q Consensus       165 s~~v~i~~~~~~~~~~~~~~D~~~si~i~~~i~~~~~~~~~~s~~~Ll~~  214 (306)
                      |+++++++.+.+  ++|+|+||++++++++++++.+++++|++.++|+|+
T Consensus       157 s~~vii~~~~~~--~~~~~~D~i~aiii~~~i~~~~~~~~~~~~~~Lld~  204 (204)
T d2qfia2         157 NGAILLALGLSW--YGWHRADALFALGIGIYILYSALRMGYEAVQSLLDR  204 (204)
T ss_dssp             SSTTCCCTTSSC--SSTTSSSSSSHHHHTTTTTTTTTTHHHHTGGGSSCC
T ss_pred             HHHHHHHHHHHH--hCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence            999999876665  489999999999999999999999999999999985



>d2qfia1 d.52.9.1 (A:209-290) Ferrous-iron efflux pump FieF (YiiP) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d3bypa1 d.52.9.1 (A:6-87) Putative Zinc transporter CzrB {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2cu6a1 d.52.8.2 (A:6-96) Hypothetical protein TTHB138 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1uwda_ d.52.8.2 (A:) Hypothetical protein TM0487 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure