Psyllid ID: psy14694

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100--
Protein Sequence
ILKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKIRIAV
Secondary Structure (PSIPRED)
ccccccccccccccHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHcccccccccccccHHHcccccccHHHHccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHcccccccccccccHHHHcHHHHHHHHHHccccccccEEEEcccc
Coil and Loop (DISEMBL)
ilkcthckvdlnlDTEIILQHYKLCSegarqssrkkydcfmcpyrtpysgtmrrhirahigdrpykcfvcpyrsnqranlmshplvqiSDEQLRFKKIRIAV
Flexible Loop (DISEMBL)
ilkcthckvdlnldtEIILQHYKLCsegarqssrkkydcfmCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLmshplvqisdeqlrfkkIRIAV
Low Complexity Region (SEG)
ILKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKIRIAV
Disordered region (IsUnstruct)
**KCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQI**************
Disordered Region (DISOPRED)
ILKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKIRIAV
Disordered Region (DISEMBL)
ILKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKIRIAV
Disordered Region (DISPRO)
ILKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKIRIA*
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
ILKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKIRIAV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	102	2.2.26 [Sep-21-2011]
Q6PD29	541	Zinc finger protein 513 O	yes	N/A	0.627	0.118	0.375	4e-08
Q8N8E2	541	Zinc finger protein 513 O	yes	N/A	0.627	0.118	0.375	4e-08
Q8VIG1	1082	RE1-silencing transcripti	no	N/A	0.470	0.044	0.44	9e-08
Q5FWU5	541	Zinc finger protein 513 O	yes	N/A	0.617	0.116	0.380	1e-07
O54963	1069	RE1-silencing transcripti	no	N/A	0.470	0.044	0.44	1e-07
Q13127	1097	RE1-silencing transcripti	no	N/A	0.470	0.043	0.44	1e-07
Q8BID6	600	Zinc finger and BTB domai	no	N/A	0.509	0.086	0.338	1e-07
Q6ZPY5	941	Zinc finger protein 507 O	no	N/A	0.784	0.085	0.312	2e-07
Q86UZ6	589	Zinc finger and BTB domai	no	N/A	0.509	0.088	0.338	2e-07
A0JPB4	434	Zinc finger protein Pegas	no	N/A	0.735	0.172	0.304	5e-07

>sp|Q6PD29|ZN513_MOUSE Zinc finger protein 513 OS=Mus musculus GN=Znf513 PE=1 SV=2

 Score = 57.0 bits (136), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 24/64 (37%), Positives = 34/64 (53%)

Query: 31  QSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISD 90
            S  K + C  CPY + +   ++RH R H G++PYKC +CPY     ANL  H  +   D
Sbjct: 382 HSGEKPFRCARCPYASAHLDNLKRHQRVHTGEKPYKCPLCPYACGNLANLKRHGRIHSGD 441

Query: 91  EQLR 94
           +  R
Sbjct: 442 KPFR 445

Transcriptional regulator that plays a role in retinal development and maintenance.
Mus musculus (taxid: 10090)

>sp|Q8N8E2|ZN513_HUMAN Zinc finger protein 513 OS=Homo sapiens GN=ZNF513 PE=1 SV=2

 Score = 56.6 bits (135), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 24/64 (37%), Positives = 34/64 (53%)

Query: 31  QSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISD 90
            S  K + C  CPY + +   ++RH R H G++PYKC +CPY     ANL  H  +   D
Sbjct: 382 HSGEKPFRCARCPYASAHLDNLKRHQRVHTGEKPYKCPLCPYACGNLANLKRHGRIHSGD 441

Query: 91  EQLR 94
           +  R
Sbjct: 442 KPFR 445

Transcriptional regulator that plays a role in retinal development and maintenance.

Homo sapiens (taxid: 9606)

>sp|Q8VIG1|REST_MOUSE RE1-silencing transcription factor OS=Mus musculus GN=Rest PE=2 SV=2

 Score = 55.5 bits (132), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 22/50 (44%), Positives = 30/50 (60%)

Query: 34  RKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSH 83
           RK Y C  C Y +       +H+R H G+RPYKC +CPY S+Q+ +L  H
Sbjct: 268 RKVYTCSKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRH 317

Transcriptional repressor which binds neuron-restrictive silencer element (NRSE) and represses neuronal gene transcription in non-neuronal cells. Restricts the expression of neuronal genes by associating with two distinct corepressors, mSin3 and CoREST, which in turn recruit histone deacetylase to the promoters of REST-regulated genes. Mediates repression by recruiting the BHC complex at RE1/NRSE sites which acts by deacetylating and demethylating specific sites on histones, thereby acting as a chromatin modifier.

Mus musculus (taxid: 10090)

>sp|Q5FWU5|ZN513_RAT Zinc finger protein 513 OS=Rattus norvegicus GN=Znf513 PE=2 SV=1

 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%)

Query: 32  SSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDE 91
           S  K + C  CPY + +   ++RH R H G++PYKC +CPY     ANL  H  +   D+
Sbjct: 383 SGEKPFRCARCPYASAHLDNLKRHQRVHTGEKPYKCPLCPYACGNLANLKRHGRIHSGDK 442

Query: 92  QLR 94
             R
Sbjct: 443 PFR 445

Transcriptional regulator that plays a role in retinal development and maintenance.

Rattus norvegicus (taxid: 10116)

>sp|O54963|REST_RAT RE1-silencing transcription factor OS=Rattus norvegicus GN=Rest PE=2 SV=1

 Score = 55.5 bits (132), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/50 (44%), Positives = 30/50 (60%)

Query: 34  RKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSH 83
           RK Y C  C Y +       +H+R H G+RPYKC +CPY S+Q+ +L  H
Sbjct: 272 RKVYTCSKCNYFSTEKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRH 321

Transcriptional repressor which binds neuron-restrictive silencer element (NRSE) and represses neuronal gene transcription in non-neuronal cells. Restricts the expression of neuronal genes by associating with two distinct corepressors, mSin3 and CoREST, which in turn recruit histone deacetylase to the promoters of REST-regulated genes. Mediates repression by recruiting the BHC complex at RE1/NRSE sites which acts by deacetylating and demethylating specific sites on histones, thereby acting as a chromatin modifier.

Rattus norvegicus (taxid: 10116)

>sp|Q13127|REST_HUMAN RE1-silencing transcription factor OS=Homo sapiens GN=REST PE=1 SV=3

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/50 (44%), Positives = 30/50 (60%)

Query: 34  RKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSH 83
           RK Y C  C Y +       +H+R H G+RPYKC +CPY S+Q+ +L  H
Sbjct: 273 RKVYTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRH 322

Transcriptional repressor which binds neuron-restrictive silencer element (NRSE) and represses neuronal gene transcription in non-neuronal cells. Restricts the expression of neuronal genes by associating with two distinct corepressors, mSin3 and CoREST, which in turn recruit histone deacetylase to the promoters of REST-regulated genes. Mediates repression by recruiting the BHC complex at RE1/NRSE sites which acts by deacetylating and demethylating specific sites on histones, thereby acting as a chromatin modifier.

Homo sapiens (taxid: 9606)

>sp|Q8BID6|ZBT46_MOUSE Zinc finger and BTB domain-containing protein 46 OS=Mus musculus GN=Zbtb46 PE=1 SV=2

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/59 (33%), Positives = 35/59 (59%)

Query: 34  RKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQ 92
           RKK+ C  C +   +   ++RH+R+H G+RPY C +C  +  +R ++  H LV   D++
Sbjct: 415 RKKFKCPYCSFSAMHQCILKRHMRSHTGERPYPCEICGKKFTRREHMKRHTLVHSKDKK 473

Function as a transcriptional repressor for PRDM1.

Mus musculus (taxid: 10090)

>sp|Q6ZPY5|ZN507_MOUSE Zinc finger protein 507 OS=Mus musculus GN=Znf507 PE=2 SV=2

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/80 (31%), Positives = 43/80 (53%)

Query: 23  KLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMS 82
           K   EG + S++K+Y C +C Y +     +R H R H  D+PY+C +C Y  +   +L S
Sbjct: 732 KCAQEGNKPSTQKQYRCDVCDYTSTTYVGVRNHRRVHNSDKPYRCSLCGYVCSHPPSLKS 791

Query: 83  HPLVQISDEQLRFKKIRIAV 102
           H     SD+   ++++  A+
Sbjct: 792 HMWKHASDQNYNYEQVNKAI 811

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|Q86UZ6|ZBT46_HUMAN Zinc finger and BTB domain-containing protein 46 OS=Homo sapiens GN=ZBTB46 PE=2 SV=2

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/59 (33%), Positives = 35/59 (59%)

Query: 34  RKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQ 92
           RKK+ C  C +   +   ++RH+R+H G+RPY C +C  +  +R ++  H LV   D++
Sbjct: 415 RKKFKCPYCSFSAMHQCILKRHMRSHTGERPYPCEICGKKFTRREHMKRHTLVHSKDKK 473

Function as a transcriptional repressor for PRDM1.

Homo sapiens (taxid: 9606)

>sp|A0JPB4|IKZF5_XENTR Zinc finger protein Pegasus OS=Xenopus tropicalis GN=ikzf5 PE=2 SV=1

 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 2   LKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIG 61
           LKC +C    +  T  +++H ++       +  K + C +CP+ + Y   +  H+R+H G
Sbjct: 82  LKCRYCNY-ASKGTARLIEHIRI------HTGEKPHRCHLCPFASAYERHLEAHMRSHTG 134

Query: 62  DRPYKCFVCPYRSNQRANLMSH 83
           ++PYKC +C +R + R+NL  H
Sbjct: 135 EKPYKCELCSFRCSDRSNLSHH 156

DNA-binding protein that binds to the 5'GNNTGTNG-3' core sequence. Transcriptional repressor.

Xenopus tropicalis (taxid: 8364)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	102
443695564	290	hypothetical protein CAPTEDRAFT_221202 [	0.460	0.162	0.489	2e-08
260787901	537	hypothetical protein BRAFLDRAFT_89181 [B	0.549	0.104	0.412	2e-07
260832854	695	hypothetical protein BRAFLDRAFT_134906 [	0.823	0.120	0.366	2e-07
313230295	389	unnamed protein product [Oikopleura dioi	0.598	0.156	0.409	6e-07
260806360	318	hypothetical protein BRAFLDRAFT_252967 [	0.372	0.119	0.490	6e-07
332243333	632	PREDICTED: zinc finger protein 513 [Noma	0.627	0.101	0.375	7e-07
158254816	541	unnamed protein product [Homo sapiens]	0.627	0.118	0.390	7e-07
260823044	540	hypothetical protein BRAFLDRAFT_71718 [B	0.764	0.144	0.376	7e-07
391334830	408	PREDICTED: methyltransferase-like protei	0.460	0.115	0.468	7e-07
260819146	282	hypothetical protein BRAFLDRAFT_136246 [	0.617	0.223	0.375	8e-07

>gi|443695564|gb|ELT96440.1| hypothetical protein CAPTEDRAFT_221202 [Capitella teleta]

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 23/47 (48%), Positives = 35/47 (74%)

Query: 37  YDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSH 83
           ++C +CPY++PY GT+ RH+R H+ D+P+KC  C Y S  R+NL+ H
Sbjct: 216 HECKLCPYKSPYRGTLNRHMRVHLSDKPFKCPFCDYSSRFRSNLLQH 262

Source: Capitella teleta

Species: Capitella teleta

Genus: Capitella

Family: Capitellidae

Order: Capitellida

Class: Polychaeta

Phylum: Annelida

Superkingdom: Eukaryota

>gi|260787901|ref|XP_002588990.1| hypothetical protein BRAFLDRAFT_89181 [Branchiostoma floridae] gi|229274162|gb|EEN45001.1| hypothetical protein BRAFLDRAFT_89181 [Branchiostoma floridae]

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 37/63 (58%)

Query: 29 ARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQI 88
          AR +  K Y C  C YRT +  ++ RH+R H G++PYKC  C Y + Q++NL SH     
Sbjct: 30 ARHTGDKPYMCGECGYRTAHKSSLSRHMRTHTGEKPYKCDQCDYSAAQKSNLDSHLATHT 89

Query: 89 SDE 91
           D+
Sbjct: 90 GDK 92

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|260832854|ref|XP_002611372.1| hypothetical protein BRAFLDRAFT_134906 [Branchiostoma floridae] gi|229296743|gb|EEN67382.1| hypothetical protein BRAFLDRAFT_134906 [Branchiostoma floridae]

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 6/90 (6%)

Query: 3   KCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGD 62
           KC  C  D +   +  L H+ L    A+ +S K Y C  C YR     T+ RH+R H GD
Sbjct: 521 KCDQC--DYSAAWKASLDHHHL----AKHTSEKSYICDECGYRAALISTLARHMRTHTGD 574

Query: 63  RPYKCFVCPYRSNQRANLMSHPLVQISDEQ 92
           +PYKC  C Y + Q+++L  H L + + E+
Sbjct: 575 KPYKCDQCDYSAAQKSSLDVHHLAKHTSEK 604

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|313230295|emb|CBY07999.1| unnamed protein product [Oikopleura dioica]

 Score = 58.2 bits (139), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 25/61 (40%), Positives = 34/61 (55%)

Query: 35  KKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLR 94
           K Y C  CPY +  SG ++ HIR H G++PY+C  C Y S  R NL  H      +E L+
Sbjct: 169 KPYKCPYCPYSSSQSGPLKIHIRGHTGEKPYRCEYCSYASTCRGNLKVHQERHHKEEILK 228

Query: 95  F 95
           +
Sbjct: 229 Y 229

Source: Oikopleura dioica

Species: Oikopleura dioica

Genus: Oikopleura

Family: Oikopleuridae

Class: Appendicularia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|260806360|ref|XP_002598052.1| hypothetical protein BRAFLDRAFT_252967 [Branchiostoma floridae] gi|229283323|gb|EEN54064.1| hypothetical protein BRAFLDRAFT_252967 [Branchiostoma floridae]

 Score = 58.2 bits (139), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/53 (49%), Positives = 31/53 (58%)

Query: 31 QSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSH 83
           +  K Y C  C YRT   G + RH+R H GD+PYKC  C Y + QRANL  H
Sbjct: 5  HTGEKPYMCGECGYRTSTKGALSRHMRTHTGDKPYKCDQCDYSAAQRANLDKH 57

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|332243333|ref|XP_003270833.1| PREDICTED: zinc finger protein 513 [Nomascus leucogenys]

 Score = 58.2 bits (139), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 24/64 (37%), Positives = 34/64 (53%)

Query: 31  QSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISD 90
            S  K + C  CPY + +   ++RH R H G++PYKC +CPY     ANL  H  +   D
Sbjct: 473 HSGEKPFRCARCPYASAHLDNLKRHQRVHTGEKPYKCPLCPYACGNLANLKRHGRIHSGD 532

Query: 91  EQLR 94
           +  R
Sbjct: 533 KPFR 536

Source: Nomascus leucogenys

Species: Nomascus leucogenys

Genus: Nomascus

Family: Hylobatidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|158254816|dbj|BAF83379.1| unnamed protein product [Homo sapiens]

 Score = 58.2 bits (139), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 25/64 (39%), Positives = 35/64 (54%)

Query: 31  QSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISD 90
            S  K + C  CPY + +   ++RH R H G++PYKC +CPY     ANL  H  +  SD
Sbjct: 382 HSGEKPFRCARCPYASAHLDNLKRHQRVHTGEKPYKCPLCPYACGNLANLKRHGRIHSSD 441

Query: 91  EQLR 94
           +  R
Sbjct: 442 KPFR 445

Source: Homo sapiens

Species: Homo sapiens

Genus: Homo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|260823044|ref|XP_002603993.1| hypothetical protein BRAFLDRAFT_71718 [Branchiostoma floridae] gi|229289318|gb|EEN60004.1| hypothetical protein BRAFLDRAFT_71718 [Branchiostoma floridae]

 Score = 58.2 bits (139), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 45/93 (48%), Gaps = 15/93 (16%)

Query: 4   CTHCKVDL----NLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAH 59
           C HC        NLD  I  +H          +  K Y C  C YRT Y   + RH+R H
Sbjct: 177 CDHCDFSTSHKSNLDRHIAAKH----------TGEKPYMCGGCGYRTIYRSHLSRHMRTH 226

Query: 60  IGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQ 92
            G+RPYKC  C Y + Q+ +L  H LV+ + EQ
Sbjct: 227 TGERPYKCDKCDYSAAQKGDLDKH-LVKHTGEQ 258

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|391334830|ref|XP_003741803.1| PREDICTED: methyltransferase-like protein 17, mitochondrial-like [Metaseiulus occidentalis]

 Score = 57.8 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 22/47 (46%), Positives = 27/47 (57%)

Query: 37  YDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSH 83
           + C  C Y+TPY G ++RH R H G RPY C  C Y + Q  NL  H
Sbjct: 345 FQCNQCNYQTPYQGNLKRHTRVHTGQRPYPCGYCSYSATQLENLKRH 391

Source: Metaseiulus occidentalis

Species: Metaseiulus occidentalis

Genus: Metaseiulus

Family: Phytoseiidae

Order: Mesostigmata

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|260819146|ref|XP_002604898.1| hypothetical protein BRAFLDRAFT_136246 [Branchiostoma floridae] gi|229290227|gb|EEN60908.1| hypothetical protein BRAFLDRAFT_136246 [Branchiostoma floridae]

 Score = 57.8 bits (138), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 40/64 (62%)

Query: 29  ARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQI 88
           A+ +  K Y C  C YRT Y   + +H+R H G++PYKC  C Y + Q+++L +H L++ 
Sbjct: 110 AKHTGDKPYMCGECGYRTAYKAGLLKHMRTHTGEKPYKCDKCDYSAAQKSSLKTHHLLKH 169

Query: 89  SDEQ 92
           +D +
Sbjct: 170 TDRK 173

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	102
UNIPROTKB|D4ABG6	268	Znf513 "Zinc finger protein 51	0.617	0.235	0.380	8.8e-10
UNIPROTKB|A4IFJ6	419	IKZF5 "Zinc finger protein Peg	0.735	0.178	0.304	1.3e-09
UNIPROTKB|J9JHL8	419	IKZF5 "Uncharacterized protein	0.735	0.178	0.304	1.3e-09
UNIPROTKB|Q9H5V7	419	IKZF5 "Zinc finger protein Peg	0.735	0.178	0.304	1.3e-09
UNIPROTKB|F1SED1	419	IKZF5 "Uncharacterized protein	0.735	0.178	0.304	1.3e-09
MGI|MGI:1914393	419	Ikzf5 "IKAROS family zinc fing	0.735	0.178	0.304	1.3e-09
RGD|1310965	419	Ikzf5 "IKAROS family zinc fing	0.735	0.178	0.304	1.3e-09
UNIPROTKB|E1BWQ0	421	IKZF5 "Zinc finger protein Peg	0.735	0.178	0.304	1.3e-09
UNIPROTKB|Q5ZLR2	421	IKZF5 "Zinc finger protein Peg	0.735	0.178	0.304	1.3e-09
UNIPROTKB|F1NF01	424	IKZF5 "Zinc finger protein Peg	0.735	0.176	0.304	1.3e-09

UNIPROTKB|D4ABG6 Znf513 "Zinc finger protein 513" [Rattus norvegicus (taxid:10116)]

 Score = 144 (55.7 bits), Expect = 8.8e-10, P = 8.8e-10
 Identities = 24/63 (38%), Positives = 34/63 (53%)

Query:    32 SSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDE 91
             S  K + C  CPY + +   ++RH R H G++PYKC +CPY     ANL  H  +   D+
Sbjct:   110 SGEKPFRCARCPYASAHLDNLKRHQRVHTGEKPYKCPLCPYACGNLANLKRHGRIHSGDK 169

Query:    92 QLR 94
               R
Sbjct:   170 PFR 172

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|A4IFJ6 IKZF5 "Zinc finger protein Pegasus" [Bos taurus (taxid:9913)]

 Score = 147 (56.8 bits), Expect = 1.3e-09, P = 1.3e-09
 Identities = 25/82 (30%), Positives = 46/82 (56%)

Query:     2 LKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIG 61
             LKC +C    +  T  +++H ++       +  K + C +CP+ + Y   +  H+R+H G
Sbjct:    82 LKCRYCNY-ASKGTARLIEHIRI------HTGEKPHRCHLCPFASAYERHLEAHMRSHTG 134

Query:    62 DRPYKCFVCPYRSNQRANLMSH 83
             ++PYKC +C +R + R+NL  H
Sbjct:   135 EKPYKCELCSFRCSDRSNLSHH 156

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|J9JHL8 IKZF5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 147 (56.8 bits), Expect = 1.3e-09, P = 1.3e-09
 Identities = 25/82 (30%), Positives = 46/82 (56%)

Query:     2 LKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIG 61
             LKC +C    +  T  +++H ++       +  K + C +CP+ + Y   +  H+R+H G
Sbjct:    82 LKCRYCNY-ASKGTARLIEHIRI------HTGEKPHRCHLCPFASAYERHLEAHMRSHTG 134

Query:    62 DRPYKCFVCPYRSNQRANLMSH 83
             ++PYKC +C +R + R+NL  H
Sbjct:   135 EKPYKCELCSFRCSDRSNLSHH 156

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|Q9H5V7 IKZF5 "Zinc finger protein Pegasus" [Homo sapiens (taxid:9606)]

 Score = 147 (56.8 bits), Expect = 1.3e-09, P = 1.3e-09
 Identities = 25/82 (30%), Positives = 46/82 (56%)

Query:     2 LKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIG 61
             LKC +C    +  T  +++H ++       +  K + C +CP+ + Y   +  H+R+H G
Sbjct:    82 LKCRYCNY-ASKGTARLIEHIRI------HTGEKPHRCHLCPFASAYERHLEAHMRSHTG 134

Query:    62 DRPYKCFVCPYRSNQRANLMSH 83
             ++PYKC +C +R + R+NL  H
Sbjct:   135 EKPYKCELCSFRCSDRSNLSHH 156

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|F1SED1 IKZF5 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 147 (56.8 bits), Expect = 1.3e-09, P = 1.3e-09
 Identities = 25/82 (30%), Positives = 46/82 (56%)

Query:     2 LKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIG 61
             LKC +C    +  T  +++H ++       +  K + C +CP+ + Y   +  H+R+H G
Sbjct:    82 LKCRYCNY-ASKGTARLIEHIRI------HTGEKPHRCHLCPFASAYERHLEAHMRSHTG 134

Query:    62 DRPYKCFVCPYRSNQRANLMSH 83
             ++PYKC +C +R + R+NL  H
Sbjct:   135 EKPYKCELCSFRCSDRSNLSHH 156

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

MGI|MGI:1914393 Ikzf5 "IKAROS family zinc finger 5" [Mus musculus (taxid:10090)]

 Score = 147 (56.8 bits), Expect = 1.3e-09, P = 1.3e-09
 Identities = 25/82 (30%), Positives = 46/82 (56%)

Query:     2 LKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIG 61
             LKC +C    +  T  +++H ++       +  K + C +CP+ + Y   +  H+R+H G
Sbjct:    82 LKCRYCNY-ASKGTARLIEHIRI------HTGEKPHRCHLCPFASAYERHLEAHMRSHTG 134

Query:    62 DRPYKCFVCPYRSNQRANLMSH 83
             ++PYKC +C +R + R+NL  H
Sbjct:   135 EKPYKCELCSFRCSDRSNLSHH 156

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

RGD|1310965 Ikzf5 "IKAROS family zinc finger 5" [Rattus norvegicus (taxid:10116)]

 Score = 147 (56.8 bits), Expect = 1.3e-09, P = 1.3e-09
 Identities = 25/82 (30%), Positives = 46/82 (56%)

Query:     2 LKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIG 61
             LKC +C    +  T  +++H ++       +  K + C +CP+ + Y   +  H+R+H G
Sbjct:    82 LKCRYCNY-ASKGTARLIEHIRI------HTGEKPHRCHLCPFASAYERHLEAHMRSHTG 134

Query:    62 DRPYKCFVCPYRSNQRANLMSH 83
             ++PYKC +C +R + R+NL  H
Sbjct:   135 EKPYKCELCSFRCSDRSNLSHH 156

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|E1BWQ0 IKZF5 "Zinc finger protein Pegasus" [Gallus gallus (taxid:9031)]

 Score = 147 (56.8 bits), Expect = 1.3e-09, P = 1.3e-09
 Identities = 25/82 (30%), Positives = 46/82 (56%)

Query:     2 LKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIG 61
             LKC +C    +  T  +++H ++       +  K + C +CP+ + Y   +  H+R+H G
Sbjct:    82 LKCRYCNY-ASKGTARLIEHIRI------HTGEKPHRCHLCPFASAYERHLEAHMRSHTG 134

Query:    62 DRPYKCFVCPYRSNQRANLMSH 83
             ++PYKC +C +R + R+NL  H
Sbjct:   135 EKPYKCELCSFRCSDRSNLSHH 156

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q5ZLR2 IKZF5 "Zinc finger protein Pegasus" [Gallus gallus (taxid:9031)]

 Score = 147 (56.8 bits), Expect = 1.3e-09, P = 1.3e-09
 Identities = 25/82 (30%), Positives = 46/82 (56%)

Query:     2 LKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIG 61
             LKC +C    +  T  +++H ++       +  K + C +CP+ + Y   +  H+R+H G
Sbjct:    82 LKCRYCNY-ASKGTARLIEHIRI------HTGEKPHRCHLCPFASAYERHLEAHMRSHTG 134

Query:    62 DRPYKCFVCPYRSNQRANLMSH 83
             ++PYKC +C +R + R+NL  H
Sbjct:   135 EKPYKCELCSFRCSDRSNLSHH 156

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|F1NF01 IKZF5 "Zinc finger protein Pegasus" [Gallus gallus (taxid:9031)]

 Score = 147 (56.8 bits), Expect = 1.3e-09, P = 1.3e-09
 Identities = 25/82 (30%), Positives = 46/82 (56%)

Query:     2 LKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIG 61
             LKC +C    +  T  +++H ++       +  K + C +CP+ + Y   +  H+R+H G
Sbjct:    85 LKCRYCNY-ASKGTARLIEHIRI------HTGEKPHRCHLCPFASAYERHLEAHMRSHTG 137

Query:    62 DRPYKCFVCPYRSNQRANLMSH 83
             ++PYKC +C +R + R+NL  H
Sbjct:   138 EKPYKCELCSFRCSDRSNLSHH 159

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	102
KOG2462|consensus	279		99.97
KOG2462|consensus	279		99.94
KOG3576|consensus	267		99.81
KOG3623|consensus	1007		99.78
KOG3623|consensus	1007		99.73
KOG3576|consensus	267		99.64
KOG3608|consensus	467		99.51
PLN03086	567	PRLI-interacting factor K; Provisional	99.48
KOG1074|consensus	958		99.4
KOG3608|consensus	467		99.37
PHA02768	55	hypothetical protein; Provisional	99.34
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	99.3
PHA00733	128	hypothetical protein	99.3
PHA02768	55	hypothetical protein; Provisional	99.29
KOG1074|consensus	958		99.29
PHA00733	128	hypothetical protein	99.22
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	99.09
PLN03086	567	PRLI-interacting factor K; Provisional	99.01
PHA00616	44	hypothetical protein	98.99
KOG3993|consensus	500		98.74
PHA00732	79	hypothetical protein	98.72
PHA00616	44	hypothetical protein	98.59
PHA00732	79	hypothetical protein	98.52
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.22
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.2
KOG3993|consensus	500		98.09
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.08
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	98.07
PRK04860	160	hypothetical protein; Provisional	98.07
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.0
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.97
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.93
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.77
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.72
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.68
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.66
smart00355	26	ZnF_C2H2 zinc finger.	97.63
PRK04860	160	hypothetical protein; Provisional	97.51
smart00355	26	ZnF_C2H2 zinc finger.	97.31
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.11
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.07
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	97.03
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	97.01
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.97
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	96.72
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.7
COG5048	467	FOG: Zn-finger [General function prediction only]	96.56
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	96.08
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	95.9
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	95.85
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	95.54
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	95.53
KOG2893|consensus	341		95.33
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	95.21
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	94.82
PRK14890	59	putative Zn-ribbon RNA-binding protein; Provisiona	94.78
COG1592	166	Rubrerythrin [Energy production and conversion]	94.63
PF09723	42	Zn-ribbon_8: Zinc ribbon domain; InterPro: IPR0134	94.6
PRK00464	154	nrdR transcriptional regulator NrdR; Validated	94.29
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	94.26
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	94.19
smart00834	41	CxxC_CXXC_SSSS Putative regulatory protein. CxxC_C	94.18
TIGR02605	52	CxxC_CxxC_SSSS putative regulatory protein, FmdB f	94.15
KOG2186|consensus	276		93.53
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	93.42
PHA00626	59	hypothetical protein	93.42
PRK00398	46	rpoP DNA-directed RNA polymerase subunit P; Provis	93.12
COG5048	467	FOG: Zn-finger [General function prediction only]	92.92
PF07754	24	DUF1610: Domain of unknown function (DUF1610); Int	92.65
COG3357	97	Predicted transcriptional regulator containing an	92.6
smart00659	44	RPOLCX RNA polymerase subunit CX. present in RNA p	92.57
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	92.24
PF13240	23	zinc_ribbon_2: zinc-ribbon domain	91.85
smart00531	147	TFIIE Transcription initiation factor IIE.	91.74
PRK06266	178	transcription initiation factor E subunit alpha; V	91.11
PF14353	128	CpXC: CpXC protein	90.97
KOG2186|consensus	276		90.75
KOG2893|consensus	341		90.65
COG1996	49	RPC10 DNA-directed RNA polymerase, subunit RPC10 (	90.13
PF13451	49	zf-trcl: Probable zinc-binding domain	89.74
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	89.6
COG1997	89	RPL43A Ribosomal protein L37AE/L43A [Translation,	88.36
PRK03824	135	hypA hydrogenase nickel incorporation protein; Pro	87.48
COG4049	65	Uncharacterized protein containing archaeal-type C	87.48
KOG1146|consensus	1406		87.37
PF05443	132	ROS_MUCR: ROS/MUCR transcriptional regulator prote	84.94
PF10571	26	UPF0547: Uncharacterised protein family UPF0547; I	84.4
KOG1146|consensus	1406		84.28
PF03604	32	DNA_RNApol_7kD: DNA directed RNA polymerase, 7 kDa	84.24
PF12760	46	Zn_Tnp_IS1595: Transposase zinc-ribbon domain; Int	83.73
smart00614	50	ZnF_BED BED zinc finger. DNA-binding domain in chr	83.65
COG1773	55	Rubredoxin [Energy production and conversion]	83.02
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	82.85
PF08274	30	PhnA_Zn_Ribbon: PhnA Zinc-Ribbon ; InterPro: IPR01	82.78
COG5236	493	Uncharacterized conserved protein, contains RING Z	82.33
TIGR02300	129	FYDLN_acid conserved hypothetical protein TIGR0230	81.88
PF01780	90	Ribosomal_L37ae: Ribosomal L37ae protein family; I	81.65
COG3091	156	SprT Zn-dependent metalloprotease, SprT family [Ge	81.27
TIGR00100	115	hypA hydrogenase nickel insertion protein HypA. In	81.11
PRK09678	72	DNA-binding transcriptional regulator; Provisional	80.83
smart00440	40	ZnF_C2C2 C2C2 Zinc finger. Nucleic-acid-binding mo	80.53
PF11789	57	zf-Nse: Zinc-finger of the MIZ type in Nse subunit	80.45
COG0068	750	HypF Hydrogenase maturation factor [Posttranslatio	80.04

>KOG2462|consensus

Probab=99.97  E-value=1.7e-32  Score=156.21  Aligned_cols=92  Identities=18%  Similarity=0.361  Sum_probs=86.3

Q ss_pred             ccCCccccccccCHHHHHHHHhhhccccccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhhh
Q psy14694          2 LKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLM   81 (102)
Q Consensus         2 ~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~   81 (102)
                      +.|+.|++.|. +-..|..|+++|+        -++.|.+||+.|..++-|+.|+|+|+|||||.|..|+++|.+.+||+
T Consensus       162 ~~C~~C~K~Yv-SmpALkMHirTH~--------l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLR  232 (279)
T KOG2462|consen  162 FSCKYCGKVYV-SMPALKMHIRTHT--------LPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLR  232 (279)
T ss_pred             ccCCCCCceee-ehHHHhhHhhccC--------CCcccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHH
Confidence            56888888888 8888888888864        67899999999999999999999999999999999999999999999


Q ss_pred             hhhhhcCCCCccccccccccC
Q psy14694         82 SHPLVQISDEQLRFKKIRIAV  102 (102)
Q Consensus        82 ~h~~~~~~~~~~~C~~c~~~~  102 (102)
                      .|+++|.+.|.|+|+.|+|+|
T Consensus       233 AHmQTHS~~K~~qC~~C~KsF  253 (279)
T KOG2462|consen  233 AHMQTHSDVKKHQCPRCGKSF  253 (279)
T ss_pred             HHHHhhcCCccccCcchhhHH
Confidence            999999999999999999998

>KOG2462|consensus

Probab=99.94  E-value=5.3e-28  Score=138.03  Aligned_cols=95  Identities=19%  Similarity=0.322  Sum_probs=88.5

Q ss_pred             ccCCccccccccCHHHHHHHHhhhccccccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhhh
Q psy14694          2 LKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLM   81 (102)
Q Consensus         2 ~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~   81 (102)
                      |+|..|++.+. ...+|..|..+|....   ..+-+.|..|++.+....+|.+|+++|+  .+++|.+||+.|.++=.|+
T Consensus       131 ~~c~eCgk~ys-T~snLsrHkQ~H~~~~---s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQ  204 (279)
T KOG2462|consen  131 YKCPECGKSYS-TSSNLSRHKQTHRSLD---SKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQ  204 (279)
T ss_pred             eeccccccccc-cccccchhhccccccc---ccccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhh
Confidence            68999999999 8899999999987444   4677899999999999999999999997  6899999999999999999


Q ss_pred             hhhhhcCCCCccccccccccC
Q psy14694         82 SHPLVQISDEQLRFKKIRIAV  102 (102)
Q Consensus        82 ~h~~~~~~~~~~~C~~c~~~~  102 (102)
                      .|+|+|||||||.|+.|+|+|
T Consensus       205 GHiRTHTGEKPF~C~hC~kAF  225 (279)
T KOG2462|consen  205 GHIRTHTGEKPFSCPHCGKAF  225 (279)
T ss_pred             cccccccCCCCccCCcccchh
Confidence            999999999999999999998

>KOG3576|consensus

Probab=99.81  E-value=2.2e-21  Score=107.23  Aligned_cols=92  Identities=26%  Similarity=0.417  Sum_probs=83.6

Q ss_pred             ccCCccccccccCHHHHHHHHhhhccccccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhhh
Q psy14694          2 LKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLM   81 (102)
Q Consensus         2 ~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~   81 (102)
                      |.|..|++.|. ....|.+|++.|.      ..+.+-|..||+.|.....|.+|.++|+|.+||+|..|+++|.+.-.|.
T Consensus       118 ftCrvCgK~F~-lQRmlnrh~kch~------~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsle  190 (267)
T KOG3576|consen  118 FTCRVCGKKFG-LQRMLNRHLKCHS------DVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLE  190 (267)
T ss_pred             eeeehhhhhhh-HHHHHHHHhhhcc------HHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHH
Confidence            67999999998 8889999999988      8888999999999999999999999999999999999999999999999


Q ss_pred             hhhhh-c----------CCCCccccccccc
Q psy14694         82 SHPLV-Q----------ISDEQLRFKKIRI  100 (102)
Q Consensus        82 ~h~~~-~----------~~~~~~~C~~c~~  100 (102)
                      .|.+- |          ..++.|.|.+||.
T Consensus       191 shl~kvhgv~~~yaykerr~kl~vcedcg~  220 (267)
T KOG3576|consen  191 SHLKKVHGVQHQYAYKERRAKLYVCEDCGY  220 (267)
T ss_pred             HHHHHHcCchHHHHHHHhhhheeeecccCC
Confidence            99554 5          3467789999985

>KOG3623|consensus

Probab=99.78  E-value=2e-20  Score=118.78  Aligned_cols=70  Identities=21%  Similarity=0.466  Sum_probs=65.6

Q ss_pred             CCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccccccC
Q psy14694         33 SRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKIRIAV  102 (102)
Q Consensus        33 ~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c~~~~  102 (102)
                      .+.+|.|+.|.+.|...+.|.+|...|+|.+||+|.+|.++|..+-.|..|.|.|.|||||.|++|+|.|
T Consensus       891 e~gmyaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRF  960 (1007)
T KOG3623|consen  891 EDGMYACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRF  960 (1007)
T ss_pred             ccccchHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhc
Confidence            5677999999999999999999999999999999999999999999999999999999999999999987

>KOG3623|consensus

Probab=99.73  E-value=6.1e-19  Score=112.20  Aligned_cols=78  Identities=21%  Similarity=0.499  Sum_probs=73.3

Q ss_pred             CccCCccccccccCHHHHHHHHhhhccccccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhh
Q psy14694          1 ILKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANL   80 (102)
Q Consensus         1 ~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l   80 (102)
                      +|.|+.|+|+|. ..+.|.+|.-.|+      |.+||+|.+|.+.|.....|..|.|.|.|||||+|.+|++.|+....+
T Consensus       894 myaCDqCDK~Fq-KqSSLaRHKYEHs------GqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGSY  966 (1007)
T KOG3623|consen  894 MYACDQCDKAFQ-KQSSLARHKYEHS------GQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGSY  966 (1007)
T ss_pred             cchHHHHHHHHH-hhHHHHHhhhhhc------CCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccch
Confidence            588999999998 8888999999988      999999999999999999999999999999999999999999999888


Q ss_pred             hhhhh
Q psy14694         81 MSHPL   85 (102)
Q Consensus        81 ~~h~~   85 (102)
                      .+|+-
T Consensus       967 SQHMN  971 (1007)
T KOG3623|consen  967 SQHMN  971 (1007)
T ss_pred             Hhhhc
Confidence            88864

>KOG3576|consensus

Probab=99.64  E-value=1.6e-17  Score=92.14  Aligned_cols=70  Identities=16%  Similarity=0.304  Sum_probs=66.6

Q ss_pred             CCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccccccC
Q psy14694         33 SRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKIRIAV  102 (102)
Q Consensus        33 ~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c~~~~  102 (102)
                      +...+.|..|++.|....-|.+|+.-|...+.+-|..||+.|.+.-.|++|.|+|+|.+||+|..|+|+|
T Consensus       114 d~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaf  183 (267)
T KOG3576|consen  114 DQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAF  183 (267)
T ss_pred             CCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHH
Confidence            4566899999999999999999999999999999999999999999999999999999999999999997

>KOG3608|consensus

Probab=99.51  E-value=7.7e-15  Score=87.40  Aligned_cols=91  Identities=21%  Similarity=0.469  Sum_probs=66.3

Q ss_pred             CccCCccccccccCHHHHHHHHhhhccccccCCCCceeCCCCCCCCCCcchHHHHhhh-hcCCCCccCCCCCCccCCchh
Q psy14694          1 ILKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRA-HIGDRPYKCFVCPYRSNQRAN   79 (102)
Q Consensus         1 ~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~-h~~~~~~~c~~c~~~f~~~~~   79 (102)
                      ||.|..|.+.|. ....|..|+..|-        .-|+|+.|.......+.|..|++. |...|||+|..|++.+...+.
T Consensus       237 ~fqC~~C~KrFa-TeklL~~Hv~rHv--------n~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esd  307 (467)
T KOG3608|consen  237 SFQCAQCFKRFA-TEKLLKSHVVRHV--------NCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESD  307 (467)
T ss_pred             chHHHHHHHHHh-HHHHHHHHHHHhh--------hcccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHH
Confidence            466777777777 6667777776653        457777777777777888888775 677788888888888888888


Q ss_pred             hhhhhhhcCCCCcccccc--cccc
Q psy14694         80 LMSHPLVQISDEQLRFKK--IRIA  101 (102)
Q Consensus        80 l~~h~~~~~~~~~~~C~~--c~~~  101 (102)
                      |.+|..+|. +-.|+|+.  |..+
T Consensus       308 L~kH~~~HS-~~~y~C~h~~C~~s  330 (467)
T KOG3608|consen  308 LAKHVQVHS-KTVYQCEHPDCHYS  330 (467)
T ss_pred             HHHHHHhcc-ccceecCCCCCcHH
Confidence            888877777 55777765  6554

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.48  E-value=1.1e-13  Score=87.64  Aligned_cols=88  Identities=15%  Similarity=0.241  Sum_probs=74.4

Q ss_pred             ccCCccccccccCHHHHHHHHhhhccccccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCC-----
Q psy14694          2 LKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQ-----   76 (102)
Q Consensus         2 ~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~-----   76 (102)
                      +.|+.|++.|.  ...|..|+++++        +++.|+ |++.+ ....|..|+.+|.+++++.|..|++.+..     
T Consensus       454 ~~C~~Cgk~f~--~s~LekH~~~~H--------kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~  521 (567)
T PLN03086        454 VHCEKCGQAFQ--QGEMEKHMKVFH--------EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAM  521 (567)
T ss_pred             ccCCCCCCccc--hHHHHHHHHhcC--------CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCcccc
Confidence            57999999995  467889988863        678898 99755 56899999999999999999999999852     


Q ss_pred             -----chhhhhhhhhcCCCCccccccccccC
Q psy14694         77 -----RANLMSHPLVQISDEQLRFKKIRIAV  102 (102)
Q Consensus        77 -----~~~l~~h~~~~~~~~~~~C~~c~~~~  102 (102)
                           .+.|..|..++ |.+++.|+.||+.|
T Consensus       522 d~~d~~s~Lt~HE~~C-G~rt~~C~~Cgk~V  551 (567)
T PLN03086        522 DVRDRLRGMSEHESIC-GSRTAPCDSCGRSV  551 (567)
T ss_pred             chhhhhhhHHHHHHhc-CCcceEccccCCee
Confidence                 35799999986 99999999999865

>KOG1074|consensus

Probab=99.40  E-value=9.2e-14  Score=90.05  Aligned_cols=67  Identities=22%  Similarity=0.481  Sum_probs=52.2

Q ss_pred             CceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCc----cccc---ccccc
Q psy14694         35 KKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQ----LRFK---KIRIA  101 (102)
Q Consensus        35 ~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~----~~C~---~c~~~  101 (102)
                      .+-+|.+|.+..+-.++|++|.++|+||+||+|.+||++|..+.+|+.|+.+|....+    ++||   +|-+-
T Consensus       604 dPNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~k  677 (958)
T KOG1074|consen  604 DPNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKK  677 (958)
T ss_pred             CccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhccc
Confidence            3457888888888888888888888888888888888888888888888888876655    5577   66543

>KOG3608|consensus

Probab=99.37  E-value=8.3e-14  Score=83.09  Aligned_cols=67  Identities=18%  Similarity=0.419  Sum_probs=49.4

Q ss_pred             CCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhhhhhhhh-cCCCCccccccccccC
Q psy14694         34 RKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLV-QISDEQLRFKKIRIAV  102 (102)
Q Consensus        34 ~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~-~~~~~~~~C~~c~~~~  102 (102)
                      ..+|.|..|.+.|.....|..|++.|.  .-|+|+.|+.+...++.|.+|++. |..++||+|+.|++.|
T Consensus       235 ~n~fqC~~C~KrFaTeklL~~Hv~rHv--n~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c  302 (467)
T KOG3608|consen  235 TNSFQCAQCFKRFATEKLLKSHVVRHV--NCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRC  302 (467)
T ss_pred             CCchHHHHHHHHHhHHHHHHHHHHHhh--hcccccccccCCCChHHHHHHHHhhhccCCCccccchhhhh
Confidence            344555555555555555555555543  347888899999999999999988 9999999999998764

>PHA02768 hypothetical protein; Provisional

Probab=99.34  E-value=5.1e-13  Score=59.88  Aligned_cols=44  Identities=23%  Similarity=0.325  Sum_probs=35.6

Q ss_pred             ceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhhh
Q psy14694         36 KYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLM   81 (102)
Q Consensus        36 ~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~   81 (102)
                      .|.|+.||+.|...++|..|+++|+  ++++|..|++.|.+.+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            3678888888888888888888887  6788888888888777664

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=99.30  E-value=5.2e-13  Score=51.82  Aligned_cols=24  Identities=13%  Similarity=0.116  Sum_probs=19.6

Q ss_pred             hhhhhhhhcCCCCccccccccccC
Q psy14694         79 NLMSHPLVQISDEQLRFKKIRIAV  102 (102)
Q Consensus        79 ~l~~h~~~~~~~~~~~C~~c~~~~  102 (102)
                      +|..|+++|+|++||.|+.|+++|
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F   24 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSF   24 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEE
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCee
Confidence            467888888888888888888876

...

>PHA00733 hypothetical protein

Probab=99.30  E-value=3.3e-12  Score=67.60  Aligned_cols=54  Identities=20%  Similarity=0.360  Sum_probs=34.3

Q ss_pred             CCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcC
Q psy14694         33 SRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQI   88 (102)
Q Consensus        33 ~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~   88 (102)
                      ++++|.|..|++.|.....|..|++.+  +.++.|..|++.|.....|..|+...+
T Consensus        70 ~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL~~H~~~~h  123 (128)
T PHA00733         70 AVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDSTLDHVCKKH  123 (128)
T ss_pred             CCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHHHHHHHHhc
Confidence            456666666666666666666666654  345666666666666666666665533

>PHA02768 hypothetical protein; Provisional

Probab=99.29  E-value=1.3e-12  Score=58.58  Aligned_cols=37  Identities=16%  Similarity=0.340  Sum_probs=27.3

Q ss_pred             CccCCCCCCccCCchhhhhhhhhcCCCCccccccccccC
Q psy14694         64 PYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKIRIAV  102 (102)
Q Consensus        64 ~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c~~~~  102 (102)
                      .|.|++||+.|+..++|..|+++|+  ++|+|..|+++|
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f   41 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRIS   41 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCccccee
Confidence            4677777777777777777777777  577777777765

>KOG1074|consensus

Probab=99.29  E-value=1.6e-12  Score=84.51  Aligned_cols=83  Identities=17%  Similarity=0.442  Sum_probs=74.6

Q ss_pred             CccCCccccccccCHHHHHHHHhhhccccccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCC----CccCC---CCCCc
Q psy14694          1 ILKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDR----PYKCF---VCPYR   73 (102)
Q Consensus         1 ~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~----~~~c~---~c~~~   73 (102)
                      |..|..|-+..+ -...|+.|.++|+      ||+||.|.+|++.|....+|..|+.+|...-    .+.|+   +|-+.
T Consensus       605 PNqCiiC~rVlS-C~saLqmHyrtHt------GERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~k  677 (958)
T KOG1074|consen  605 PNQCIICLRVLS-CPSALQMHYRTHT------GERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKK  677 (958)
T ss_pred             ccceeeeeeccc-chhhhhhhhhccc------CcCccccccccchhccccchhhcccccccCccccccccCCchhhhccc
Confidence            457888999998 9999999999999      9999999999999999999999999886543    37888   89999


Q ss_pred             cCCchhhhhhhhhcCCC
Q psy14694         74 SNQRANLMSHPLVQISD   90 (102)
Q Consensus        74 f~~~~~l~~h~~~~~~~   90 (102)
                      |.....|++|++.|.+.
T Consensus       678 ftn~V~lpQhIriH~~~  694 (958)
T KOG1074|consen  678 FTNAVTLPQHIRIHLGG  694 (958)
T ss_pred             ccccccccceEEeecCC
Confidence            99999999999999844

>PHA00733 hypothetical protein

Probab=99.22  E-value=4.9e-12  Score=66.97  Aligned_cols=68  Identities=10%  Similarity=0.070  Sum_probs=55.0

Q ss_pred             CCCceeCCCCCCCCCCcchHHHH--hh---hhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccccccC
Q psy14694         33 SRKKYDCFMCPYRTPYSGTMRRH--IR---AHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKIRIAV  102 (102)
Q Consensus        33 ~~~~~~c~~c~~~~~~~~~l~~h--~~---~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c~~~~  102 (102)
                      ..+++.|.+|...+.....|..+  +.   .+.+++||.|..|++.|.....|..|++.+  +.+|.|+.|+++|
T Consensus        37 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F  109 (128)
T PHA00733         37 EQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEF  109 (128)
T ss_pred             hhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCcc
Confidence            56788899988877776666555  11   234578999999999999999999999976  4579999999987

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=99.09  E-value=5e-11  Score=46.18  Aligned_cols=25  Identities=44%  Similarity=0.996  Sum_probs=21.7

Q ss_pred             hHHHHhhhhcCCCCccCCCCCCccC
Q psy14694         51 TMRRHIRAHIGDRPYKCFVCPYRSN   75 (102)
Q Consensus        51 ~l~~h~~~h~~~~~~~c~~c~~~f~   75 (102)
                      +|..|+++|+|++||.|..|++.|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEES
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeC
Confidence            4778999999999999999998886

...

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.01  E-value=1.5e-09  Score=69.40  Aligned_cols=93  Identities=18%  Similarity=0.378  Sum_probs=69.6

Q ss_pred             cCCccccccccCHHHHHHHHhhhcc-------------ccccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCC
Q psy14694          3 KCTHCKVDLNLDTEIILQHYKLCSE-------------GARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFV   69 (102)
Q Consensus         3 ~c~~c~~~f~~~~~~l~~h~~~~~~-------------~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~   69 (102)
                      .|+.|.+...  ...|..|.....-             ......++.+.|..|++.|. ...|..|+.++.  +++.|+ 
T Consensus       409 ~C~NC~~~i~--l~~l~lHe~~C~r~~V~Cp~~~Cg~v~~r~el~~H~~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp-  482 (567)
T PLN03086        409 ECRNCKHYIP--SRSIALHEAYCSRHNVVCPHDGCGIVLRVEEAKNHVHCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP-  482 (567)
T ss_pred             ECCCCCCccc--hhHHHHHHhhCCCcceeCCcccccceeeccccccCccCCCCCCccc-hHHHHHHHHhcC--CCccCC-
Confidence            4778877764  4556666543310             01112346678999999886 578999999874  889999 


Q ss_pred             CCCccCCchhhhhhhhhcCCCCccccccccccC
Q psy14694         70 CPYRSNQRANLMSHPLVQISDEQLRFKKIRIAV  102 (102)
Q Consensus        70 c~~~f~~~~~l~~h~~~~~~~~~~~C~~c~~~~  102 (102)
                      |++.+ ....|..|+.+|.+++++.|+.|++.|
T Consensus       483 Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v  514 (567)
T PLN03086        483 CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMV  514 (567)
T ss_pred             CCCCc-chhHHHhhhhccCCCCceeCCCCCCcc
Confidence            99765 568999999999999999999999864

>PHA00616 hypothetical protein

Probab=98.99  E-value=1.1e-10  Score=50.07  Aligned_cols=34  Identities=18%  Similarity=0.392  Sum_probs=27.3

Q ss_pred             CccCCCCCCccCCchhhhhhhhhcCCCCcccccc
Q psy14694         64 PYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKK   97 (102)
Q Consensus        64 ~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~   97 (102)
                      ||+|..||+.|...+.|..|++.|+|++++.|+.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            5788888888888888888888888888887753

>KOG3993|consensus

Probab=98.74  E-value=1.1e-09  Score=67.17  Aligned_cols=81  Identities=23%  Similarity=0.387  Sum_probs=61.2

Q ss_pred             ccCCccccccccCHHHHHHHHhhhccccccCCCCceeCCCCCCCCCCcchHHHHhhhhc--------C------------
Q psy14694          2 LKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHI--------G------------   61 (102)
Q Consensus         2 ~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~--------~------------   61 (102)
                      |.|..|...|. +.-.|-+|.-..=      ....|.|++|++.|+-..+|..|+|.|.        +            
T Consensus       268 yiCqLCK~kYe-D~F~LAQHrC~RI------V~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~ra  340 (500)
T KOG3993|consen  268 YICQLCKEKYE-DAFALAQHRCPRI------VHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRA  340 (500)
T ss_pred             HHHHHHHHhhh-hHHHHhhccCCee------EEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhh
Confidence            56777888887 7777777753211      2345889999999999999999988772        1            


Q ss_pred             -------------CCCccCCCCCCccCCchhhhhhhhhcCC
Q psy14694         62 -------------DRPYKCFVCPYRSNQRANLMSHPLVQIS   89 (102)
Q Consensus        62 -------------~~~~~c~~c~~~f~~~~~l~~h~~~~~~   89 (102)
                                   +..|.|..|++.|.+...|+.|+.+|..
T Consensus       341 e~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~  381 (500)
T KOG3993|consen  341 EVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQR  381 (500)
T ss_pred             hhhhccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhc
Confidence                         1247899999999999999999888653

>PHA00732 hypothetical protein

Probab=98.72  E-value=8.7e-09  Score=50.17  Aligned_cols=47  Identities=28%  Similarity=0.458  Sum_probs=37.1

Q ss_pred             ceeCCCCCCCCCCcchHHHHhhh-hcCCCCccCCCCCCccCCchhhhhhhhhcC
Q psy14694         36 KYDCFMCPYRTPYSGTMRRHIRA-HIGDRPYKCFVCPYRSNQRANLMSHPLVQI   88 (102)
Q Consensus        36 ~~~c~~c~~~~~~~~~l~~h~~~-h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~   88 (102)
                      +|.|..|++.|.....|..|++. |.+   +.|..|++.|..   +..|.+++.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~---~~C~~CgKsF~~---l~~H~~~~~   48 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL---TKCPVCNKSYRR---LNQHFYSQY   48 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC---CccCCCCCEeCC---hhhhhcccC
Confidence            47799999999999999999874 653   579999999983   667776543

>PHA00616 hypothetical protein

Probab=98.59  E-value=3.7e-08  Score=42.29  Aligned_cols=33  Identities=12%  Similarity=0.293  Sum_probs=19.3

Q ss_pred             CccCCccccccccCHHHHHHHHhhhccccccCCCCceeCC
Q psy14694          1 ILKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCF   40 (102)
Q Consensus         1 ~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~   40 (102)
                      ||.|..||+.|. ....|..|++.++      +++++.++
T Consensus         1 pYqC~~CG~~F~-~~s~l~~H~r~~h------g~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFR-KKKEVIEHLLSVH------KQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHh-hHHHHHHHHHHhc------CCCcccee
Confidence            456666666665 5556666666555      55555543

>PHA00732 hypothetical protein

Probab=98.52  E-value=1.2e-07  Score=46.21  Aligned_cols=47  Identities=17%  Similarity=0.345  Sum_probs=37.9

Q ss_pred             CccCCccccccccCHHHHHHHHhh-hccccccCCCCceeCCCCCCCCCCcchHHHHhhhhc
Q psy14694          1 ILKCTHCKVDLNLDTEIILQHYKL-CSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHI   60 (102)
Q Consensus         1 ~~~c~~c~~~f~~~~~~l~~h~~~-~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~   60 (102)
                      ||.|+.|++.|. ....|..|++. |.      +   +.|..|++.|.   .+..|.....
T Consensus         1 py~C~~Cgk~F~-s~s~Lk~H~r~~H~------~---~~C~~CgKsF~---~l~~H~~~~~   48 (79)
T PHA00732          1 MFKCPICGFTTV-TLFALKQHARRNHT------L---TKCPVCNKSYR---RLNQHFYSQY   48 (79)
T ss_pred             CccCCCCCCccC-CHHHHHHHhhcccC------C---CccCCCCCEeC---ChhhhhcccC
Confidence            799999999998 99999999885 43      2   47999999997   4777776443

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.22  E-value=2.9e-07  Score=34.33  Aligned_cols=23  Identities=30%  Similarity=0.555  Sum_probs=17.2

Q ss_pred             ccCCCCCCccCCchhhhhhhhhc
Q psy14694         65 YKCFVCPYRSNQRANLMSHPLVQ   87 (102)
Q Consensus        65 ~~c~~c~~~f~~~~~l~~h~~~~   87 (102)
                      |.|..|++.|.....|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            46777888888888888877653

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.20  E-value=6.6e-06  Score=37.27  Aligned_cols=49  Identities=20%  Similarity=0.487  Sum_probs=26.2

Q ss_pred             ccCCccccccccCHHHHHHHHhhhccccccCCCCceeCCCCCCCCCCcchHHHHhhh
Q psy14694          2 LKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRA   58 (102)
Q Consensus         2 ~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~   58 (102)
                      |.|+.|++.|  +...|..|....+    ....+.+.|++|...+.  .+|..|+..
T Consensus         3 f~CP~C~~~~--~~~~L~~H~~~~H----~~~~~~v~CPiC~~~~~--~~l~~Hl~~   51 (54)
T PF05605_consen    3 FTCPYCGKGF--SESSLVEHCEDEH----RSESKNVVCPICSSRVT--DNLIRHLNS   51 (54)
T ss_pred             cCCCCCCCcc--CHHHHHHHHHhHC----cCCCCCccCCCchhhhh--hHHHHHHHH
Confidence            5677777743  4556666665543    11234566666665332  355555544

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>KOG3993|consensus

Probab=98.09  E-value=2.7e-07  Score=57.00  Aligned_cols=51  Identities=25%  Similarity=0.351  Sum_probs=42.9

Q ss_pred             eeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhhhhhhhhc
Q psy14694         37 YDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQ   87 (102)
Q Consensus        37 ~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~   87 (102)
                      |.|.-|...|.....|.+|.-.-..-.-|+|.+|+|.|+-+.||-.|.|=|
T Consensus       268 yiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWH  318 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWH  318 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhccc
Confidence            778888888999999999986433334599999999999999999998876

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.08  E-value=2.9e-06  Score=31.53  Aligned_cols=22  Identities=18%  Similarity=0.474  Sum_probs=16.3

Q ss_pred             ccCCccccccccCHHHHHHHHhh
Q psy14694          2 LKCTHCKVDLNLDTEIILQHYKL   24 (102)
Q Consensus         2 ~~c~~c~~~f~~~~~~l~~h~~~   24 (102)
                      |.|+.|++.|. ....|..|++.
T Consensus         1 y~C~~C~~~f~-~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFS-SKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEES-SHHHHHHHHHH
T ss_pred             CCCCCCCCccC-CHHHHHHHHhH
Confidence            56777888887 77777777765

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=98.07  E-value=1.4e-06  Score=33.72  Aligned_cols=25  Identities=20%  Similarity=0.378  Sum_probs=19.8

Q ss_pred             CccCCCCCCccCCchhhhhhhhhcC
Q psy14694         64 PYKCFVCPYRSNQRANLMSHPLVQI   88 (102)
Q Consensus        64 ~~~c~~c~~~f~~~~~l~~h~~~~~   88 (102)
                      ||.|..|++.|.....|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            5778888888888888888887764

>PRK04860 hypothetical protein; Provisional

Probab=98.07  E-value=1.9e-06  Score=47.44  Aligned_cols=35  Identities=20%  Similarity=0.455  Sum_probs=29.7

Q ss_pred             CccCCCCCCccCCchhhhhhhhhcCCCCccccccccccC
Q psy14694         64 PYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKIRIAV  102 (102)
Q Consensus        64 ~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c~~~~  102 (102)
                      +|.|. |+.   ....+..|.++|+++++|.|..|+..|
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l  153 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETL  153 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCcee
Confidence            58897 886   666788999999999999999998765

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.00  E-value=9.5e-06  Score=36.74  Aligned_cols=50  Identities=22%  Similarity=0.419  Sum_probs=38.2

Q ss_pred             ceeCCCCCCCCCCcchHHHHhhh-hcCC-CCccCCCCCCccCCchhhhhhhhhcC
Q psy14694         36 KYDCFMCPYRTPYSGTMRRHIRA-HIGD-RPYKCFVCPYRSNQRANLMSHPLVQI   88 (102)
Q Consensus        36 ~~~c~~c~~~~~~~~~l~~h~~~-h~~~-~~~~c~~c~~~f~~~~~l~~h~~~~~   88 (102)
                      .|.|+.|++ ......|..|... |..+ +.+.|++|...+.  .+|..|+..++
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            478999999 4556889999765 6554 5699999987654  48888987754

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.97  E-value=4.2e-06  Score=32.34  Aligned_cols=25  Identities=12%  Similarity=0.379  Sum_probs=19.8

Q ss_pred             CccCCccccccccCHHHHHHHHhhhc
Q psy14694          1 ILKCTHCKVDLNLDTEIILQHYKLCS   26 (102)
Q Consensus         1 ~~~c~~c~~~f~~~~~~l~~h~~~~~   26 (102)
                      ||.|..|++.|. +...|..|++.|.
T Consensus         1 ~~~C~~C~~~F~-~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFS-SLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEES-SHHHHHHHHCTTT
T ss_pred             CCCCCccCCccC-ChhHHHHHhHHhc
Confidence            678888888887 8888888877654

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.93  E-value=4.2e-06  Score=31.17  Aligned_cols=23  Identities=17%  Similarity=0.472  Sum_probs=16.1

Q ss_pred             ccCCCCCCccCCchhhhhhhhhc
Q psy14694         65 YKCFVCPYRSNQRANLMSHPLVQ   87 (102)
Q Consensus        65 ~~c~~c~~~f~~~~~l~~h~~~~   87 (102)
                      |.|..|++.|.....|..|++.+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            56778888888888888887764

...

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.77  E-value=1.3e-05  Score=40.49  Aligned_cols=73  Identities=16%  Similarity=0.269  Sum_probs=21.1

Q ss_pred             cCCccccccccCHHHHHHHHhhhccccccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhhhh
Q psy14694          3 KCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMS   82 (102)
Q Consensus         3 ~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~   82 (102)
                      .|..|+..|. +...+..|+...+      +-..-    ....+.....+..+.+... ...+.|..|++.|.....|..
T Consensus         1 ~C~~C~~~f~-~~~~l~~H~~~~H------~~~~~----~~~~l~~~~~~~~~~~~~~-~~~~~C~~C~~~f~s~~~l~~   68 (100)
T PF12756_consen    1 QCLFCDESFS-SVDDLLQHMKKKH------GFDIP----DQKYLVDPNRLLNYLRKKV-KESFRCPYCNKTFRSREALQE   68 (100)
T ss_dssp             ------------------------------------------------------------SSEEBSSSS-EESSHHHHHH
T ss_pred             Cccccccccc-ccccccccccccc------ccccc----ccccccccccccccccccc-CCCCCCCccCCCCcCHHHHHH
Confidence            4889999998 8888889986544      22110    0111222333333333222 236899999999999999999


Q ss_pred             hhhhc
Q psy14694         83 HPLVQ   87 (102)
Q Consensus        83 h~~~~   87 (102)
                      |++.+
T Consensus        69 Hm~~~   73 (100)
T PF12756_consen   69 HMRSK   73 (100)
T ss_dssp             HHHHT
T ss_pred             HHcCc
Confidence            99874

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.72  E-value=3.8e-05  Score=28.45  Aligned_cols=23  Identities=17%  Similarity=0.460  Sum_probs=15.2

Q ss_pred             ccCCccccccccCHHHHHHHHhhh
Q psy14694          2 LKCTHCKVDLNLDTEIILQHYKLC   25 (102)
Q Consensus         2 ~~c~~c~~~f~~~~~~l~~h~~~~   25 (102)
                      |.|+.|+..|. +...|..|+..+
T Consensus         1 ~~C~~C~~~~~-~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFR-SKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EES-SHHHHHHHHHHH
T ss_pred             CCCcCCCCcCC-cHHHHHHHHHhh
Confidence            56777777777 777777777654

...

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.68  E-value=2.5e-05  Score=34.44  Aligned_cols=32  Identities=22%  Similarity=0.365  Sum_probs=19.9

Q ss_pred             CCCCccCCCCCCccCCchhhhhhhhhcCCCCc
Q psy14694         61 GDRPYKCFVCPYRSNQRANLMSHPLVQISDEQ   92 (102)
Q Consensus        61 ~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~   92 (102)
                      .+.|..|++|+..+.+..+|.+|+...++.+|
T Consensus        21 S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   21 SEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             cCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            35677888888888888888888877776665

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.66  E-value=2.6e-05  Score=47.05  Aligned_cols=40  Identities=28%  Similarity=0.473  Sum_probs=27.6

Q ss_pred             CCCccCCC--CCCccCCchhhhhhhhh-c------------------CCCCcccccccccc
Q psy14694         62 DRPYKCFV--CPYRSNQRANLMSHPLV-Q------------------ISDEQLRFKKIRIA  101 (102)
Q Consensus        62 ~~~~~c~~--c~~~f~~~~~l~~h~~~-~------------------~~~~~~~C~~c~~~  101 (102)
                      +|||+|++  |++.+.....|+.|+.- |                  ..+|||.|++|+|.
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KR  407 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKR  407 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchh
Confidence            46777755  66666666666666543 2                  35699999999985

>smart00355 ZnF_C2H2 zinc finger

Probab=97.63  E-value=4.1e-05  Score=28.80  Aligned_cols=24  Identities=21%  Similarity=0.390  Sum_probs=16.3

Q ss_pred             ccCCCCCCccCCchhhhhhhhhcC
Q psy14694         65 YKCFVCPYRSNQRANLMSHPLVQI   88 (102)
Q Consensus        65 ~~c~~c~~~f~~~~~l~~h~~~~~   88 (102)
                      ++|..|+++|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            456777777777777777766543

>PRK04860 hypothetical protein; Provisional

Probab=97.51  E-value=9.2e-05  Score=40.89  Aligned_cols=39  Identities=31%  Similarity=0.525  Sum_probs=33.3

Q ss_pred             ceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCch
Q psy14694         36 KYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRA   78 (102)
Q Consensus        36 ~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~   78 (102)
                      +|.|. |+.   ....+..|.++++|+++|.|..|+..|....
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEec
Confidence            58897 876   5678899999999999999999999887543

>smart00355 ZnF_C2H2 zinc finger

Probab=97.31  E-value=0.00035  Score=26.07  Aligned_cols=23  Identities=13%  Similarity=0.459  Sum_probs=14.9

Q ss_pred             ccCCccccccccCHHHHHHHHhhh
Q psy14694          2 LKCTHCKVDLNLDTEIILQHYKLC   25 (102)
Q Consensus         2 ~~c~~c~~~f~~~~~~l~~h~~~~   25 (102)
                      |.|..|++.|. ....+..|++.|
T Consensus         1 ~~C~~C~~~f~-~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFK-SKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhC-CHHHHHHHHHHh
Confidence            45667777776 666666666644

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.11  E-value=0.00031  Score=31.08  Aligned_cols=32  Identities=25%  Similarity=0.421  Sum_probs=23.2

Q ss_pred             CCCceeCCCCCCCCCCcchHHHHhhhhcCCCC
Q psy14694         33 SRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRP   64 (102)
Q Consensus        33 ~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~   64 (102)
                      .+.|..|++|+..+.++.+|.+|+.+..+.+|
T Consensus        21 S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   21 SEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             cCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            67889999999999999999999988777665

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.07  E-value=0.00038  Score=42.22  Aligned_cols=53  Identities=28%  Similarity=0.572  Sum_probs=42.2

Q ss_pred             CCCceeCCC--CCCCCCCcchHHHHhhh-h------------------cCCCCccCCCCCCccCCchhhhhhhh
Q psy14694         33 SRKKYDCFM--CPYRTPYSGTMRRHIRA-H------------------IGDRPYKCFVCPYRSNQRANLMSHPL   85 (102)
Q Consensus        33 ~~~~~~c~~--c~~~~~~~~~l~~h~~~-h------------------~~~~~~~c~~c~~~f~~~~~l~~h~~   85 (102)
                      ++++|.|++  |.+.+.....|..|+.. |                  ...|||.|.+|++.+..-..|+.|..
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            458899976  88899998899888652 2                  23489999999999998888877754

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=97.03  E-value=0.00044  Score=26.58  Aligned_cols=22  Identities=18%  Similarity=0.295  Sum_probs=18.8

Q ss_pred             ccCCCCCCccCCchhhhhhhhh
Q psy14694         65 YKCFVCPYRSNQRANLMSHPLV   86 (102)
Q Consensus        65 ~~c~~c~~~f~~~~~l~~h~~~   86 (102)
                      |.|..|++.|.....+..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            5788999999999999888775

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=97.01  E-value=0.0002  Score=26.91  Aligned_cols=22  Identities=18%  Similarity=0.360  Sum_probs=16.6

Q ss_pred             ccCCCCCCccCCchhhhhhhhh
Q psy14694         65 YKCFVCPYRSNQRANLMSHPLV   86 (102)
Q Consensus        65 ~~c~~c~~~f~~~~~l~~h~~~   86 (102)
                      |.|..|++.|.....+..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            4577788888888888777765

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.97  E-value=0.00023  Score=26.54  Aligned_cols=23  Identities=35%  Similarity=0.684  Sum_probs=14.6

Q ss_pred             ccCCCCCCccCCchhhhhhhhhcC
Q psy14694         65 YKCFVCPYRSNQRANLMSHPLVQI   88 (102)
Q Consensus        65 ~~c~~c~~~f~~~~~l~~h~~~~~   88 (102)
                      |+|..|+.... ...|..|++.++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            46777777776 777777776643

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=96.72  E-value=0.001  Score=26.89  Aligned_cols=9  Identities=0%  Similarity=-0.296  Sum_probs=5.2

Q ss_pred             Ccccccccc
Q psy14694         91 EQLRFKKIR   99 (102)
Q Consensus        91 ~~~~C~~c~   99 (102)
                      .++.||.||
T Consensus        16 ~~~~CP~Cg   24 (33)
T cd00350          16 APWVCPVCG   24 (33)
T ss_pred             CCCcCcCCC
Confidence            455666665

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.70  E-value=0.0012  Score=24.67  Aligned_cols=23  Identities=17%  Similarity=0.433  Sum_probs=16.1

Q ss_pred             ccCCccccccccCHHHHHHHHhhh
Q psy14694          2 LKCTHCKVDLNLDTEIILQHYKLC   25 (102)
Q Consensus         2 ~~c~~c~~~f~~~~~~l~~h~~~~   25 (102)
                      |.|..|++.|. +...+..|++.+
T Consensus         1 ~~C~~C~~~f~-s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFS-SENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEES-SHHHHHHHHTTH
T ss_pred             CCCCCCCCCcC-CHHHHHHHHCcC
Confidence            45777777777 777777776543

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=96.56  E-value=0.0016  Score=40.72  Aligned_cols=62  Identities=24%  Similarity=0.415  Sum_probs=54.4

Q ss_pred             CceeCCCCCCCCCCcchHHHHhh--hhcCC--CCccCC--CCCCccCCchhhhhhhhhcCCCCccccc
Q psy14694         35 KKYDCFMCPYRTPYSGTMRRHIR--AHIGD--RPYKCF--VCPYRSNQRANLMSHPLVQISDEQLRFK   96 (102)
Q Consensus        35 ~~~~c~~c~~~~~~~~~l~~h~~--~h~~~--~~~~c~--~c~~~f~~~~~l~~h~~~~~~~~~~~C~   96 (102)
                      ....+..|...+.....+..|.+  .|.++  +++.|.  .|++.|.+...+..|...|++..+..+.
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  355 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEK  355 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccc
Confidence            35778888899999999999999  89999  999999  7999999999999999999988877664

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=96.08  E-value=0.0016  Score=32.77  Aligned_cols=59  Identities=14%  Similarity=0.223  Sum_probs=9.1

Q ss_pred             eCCCCCCCCCCcchHHHHhhhhcCC-CCccCCCCCCccCCchhhhhhhhhcCCCCccccccccccC
Q psy14694         38 DCFMCPYRTPYSGTMRRHIRAHIGD-RPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKIRIAV  102 (102)
Q Consensus        38 ~c~~c~~~~~~~~~l~~h~~~h~~~-~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c~~~~  102 (102)
                      +|..|+..|.....|..|+....+. .+ .    ...+.....+..+.+... ...+.|..|++.|
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~-~----~~~l~~~~~~~~~~~~~~-~~~~~C~~C~~~f   60 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIP-D----QKYLVDPNRLLNYLRKKV-KESFRCPYCNKTF   60 (100)
T ss_dssp             ------------------------------------------------------SSEEBSSSS-EE
T ss_pred             Cccccccccccccccccccccccccccc-c----cccccccccccccccccc-CCCCCCCccCCCC
Confidence            4788999999999999999753332 22 1    111223333334444322 2379999999875

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=95.90  E-value=0.0049  Score=28.16  Aligned_cols=32  Identities=16%  Similarity=0.175  Sum_probs=20.9

Q ss_pred             CccCCCCCCccCCchhhhhhhhhcCCCCccccccccc
Q psy14694         64 PYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKIRI  100 (102)
Q Consensus        64 ~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c~~  100 (102)
                      .|.|+.||........     +--.-..+|.||+||+
T Consensus        27 ~F~CPnCGe~~I~Rc~-----~CRk~g~~Y~Cp~CGF   58 (61)
T COG2888          27 KFPCPNCGEVEIYRCA-----KCRKLGNPYRCPKCGF   58 (61)
T ss_pred             EeeCCCCCceeeehhh-----hHHHcCCceECCCcCc
Confidence            4788889866554432     2222345899999986

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=95.85  E-value=0.0061  Score=23.00  Aligned_cols=21  Identities=19%  Similarity=0.406  Sum_probs=13.7

Q ss_pred             ccCCCCCCccCCchhhhhhhhh
Q psy14694         65 YKCFVCPYRSNQRANLMSHPLV   86 (102)
Q Consensus        65 ~~c~~c~~~f~~~~~l~~h~~~   86 (102)
                      ..|..|++.| .+..|..|+.+
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            3677788888 34556677654

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=95.54  E-value=0.0067  Score=35.26  Aligned_cols=10  Identities=10%  Similarity=-0.124  Sum_probs=7.1

Q ss_pred             cccccccccC
Q psy14694         93 LRFKKIRIAV  102 (102)
Q Consensus        93 ~~C~~c~~~~  102 (102)
                      ..||.||.+|
T Consensus        49 ~vCP~CgyA~   58 (214)
T PF09986_consen   49 WVCPHCGYAA   58 (214)
T ss_pred             EECCCCCCcc
Confidence            4588888765

>smart00451 ZnF_U1 U1-like zinc finger

Probab=95.53  E-value=0.014  Score=23.55  Aligned_cols=23  Identities=26%  Similarity=0.411  Sum_probs=15.8

Q ss_pred             CccCCccccccccCHHHHHHHHhh
Q psy14694          1 ILKCTHCKVDLNLDTEIILQHYKL   24 (102)
Q Consensus         1 ~~~c~~c~~~f~~~~~~l~~h~~~   24 (102)
                      +|.|+.|++.|. +...+..|+..
T Consensus         3 ~~~C~~C~~~~~-~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFT-DEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccC-CHHHHHHHHCh
Confidence            366777777776 66677766654

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG2893|consensus

Probab=95.33  E-value=0.0071  Score=35.55  Aligned_cols=42  Identities=19%  Similarity=0.381  Sum_probs=23.1

Q ss_pred             CCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhhhhh-hhhc
Q psy14694         42 CPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSH-PLVQ   87 (102)
Q Consensus        42 c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h-~~~~   87 (102)
                      |.+.|.....|.+|+.    .|-|+|.+|.+.+...-.|..| +++|
T Consensus        16 cnrefddekiliqhqk----akhfkchichkkl~sgpglsihcmqvh   58 (341)
T KOG2893|consen   16 CNREFDDEKILIQHQK----AKHFKCHICHKKLFSGPGLSIHCMQVH   58 (341)
T ss_pred             cccccchhhhhhhhhh----hccceeeeehhhhccCCCceeehhhhh
Confidence            5556666666666655    3446666666544444444444 4444

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=95.21  E-value=0.013  Score=23.84  Aligned_cols=8  Identities=0%  Similarity=-0.242  Sum_probs=4.3

Q ss_pred             cccccccc
Q psy14694         92 QLRFKKIR   99 (102)
Q Consensus        92 ~~~C~~c~   99 (102)
                      |..||.||
T Consensus        18 p~~CP~Cg   25 (34)
T cd00729          18 PEKCPICG   25 (34)
T ss_pred             CCcCcCCC
Confidence            44555555

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>TIGR00622 ssl1 transcription factor ssl1

Probab=94.82  E-value=0.12  Score=27.02  Aligned_cols=26  Identities=19%  Similarity=0.385  Sum_probs=16.7

Q ss_pred             CCccCCCCCCccCCchhhhhhhhhcC
Q psy14694         63 RPYKCFVCPYRSNQRANLMSHPLVQI   88 (102)
Q Consensus        63 ~~~~c~~c~~~f~~~~~l~~h~~~~~   88 (102)
                      ..|.|..|...|-..-++..|...|.
T Consensus        80 ~~y~C~~C~~~FC~dCD~fiHe~Lh~  105 (112)
T TIGR00622        80 HRYVCAVCKNVFCVDCDVFVHESLHC  105 (112)
T ss_pred             cceeCCCCCCccccccchhhhhhccC
Confidence            35777777777776666666655444

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>PRK14890 putative Zn-ribbon RNA-binding protein; Provisional

Probab=94.78  E-value=0.019  Score=26.31  Aligned_cols=32  Identities=13%  Similarity=0.114  Sum_probs=19.5

Q ss_pred             CccCCCCCCccCCchhhhhhhhhcCCCCccccccccc
Q psy14694         64 PYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKIRI  100 (102)
Q Consensus        64 ~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c~~  100 (102)
                      .|.|+.||......-     .+--.-..+|.||+||+
T Consensus        25 ~F~CPnCG~~~I~RC-----~~CRk~~~~Y~CP~CGF   56 (59)
T PRK14890         25 KFLCPNCGEVIIYRC-----EKCRKQSNPYTCPKCGF   56 (59)
T ss_pred             EeeCCCCCCeeEeec-----hhHHhcCCceECCCCCC
Confidence            478888886633322     12222245899999986

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=94.63  E-value=0.021  Score=31.86  Aligned_cols=23  Identities=17%  Similarity=0.294  Sum_probs=17.6

Q ss_pred             CccCCCCCCccCCchhhhhhhhhcCCCCcccccccc
Q psy14694         64 PYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKIR   99 (102)
Q Consensus        64 ~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c~   99 (102)
                      .|.|.+||.+             +.|+.|-.||.||
T Consensus       134 ~~vC~vCGy~-------------~~ge~P~~CPiCg  156 (166)
T COG1592         134 VWVCPVCGYT-------------HEGEAPEVCPICG  156 (166)
T ss_pred             EEEcCCCCCc-------------ccCCCCCcCCCCC
Confidence            5888888743             4557788898887

>PF09723 Zn-ribbon_8: Zinc ribbon domain; InterPro: IPR013429 This entry represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria

Probab=94.60  E-value=0.015  Score=24.82  Aligned_cols=29  Identities=14%  Similarity=0.277  Sum_probs=14.1

Q ss_pred             ccCCCCCCccCCchhhhhhhhhcCCCCccccccccc
Q psy14694         65 YKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKIRI  100 (102)
Q Consensus        65 ~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c~~  100 (102)
                      |.|..||..|.....      ... ..+-.||.||.
T Consensus         6 y~C~~Cg~~fe~~~~------~~~-~~~~~CP~Cg~   34 (42)
T PF09723_consen    6 YRCEECGHEFEVLQS------ISE-DDPVPCPECGS   34 (42)
T ss_pred             EEeCCCCCEEEEEEE------cCC-CCCCcCCCCCC
Confidence            556666655553321      111 34555666654

The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB []. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

>PRK00464 nrdR transcriptional regulator NrdR; Validated

Probab=94.29  E-value=0.022  Score=31.48  Aligned_cols=12  Identities=25%  Similarity=0.645  Sum_probs=8.6

Q ss_pred             ccCCCCCCccCC
Q psy14694         65 YKCFVCPYRSNQ   76 (102)
Q Consensus        65 ~~c~~c~~~f~~   76 (102)
                      ++|+.||++|..
T Consensus        29 ~~c~~c~~~f~~   40 (154)
T PRK00464         29 RECLACGKRFTT   40 (154)
T ss_pred             eeccccCCcceE
Confidence            677777777754

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=94.26  E-value=0.035  Score=22.98  Aligned_cols=11  Identities=18%  Similarity=0.301  Sum_probs=5.0

Q ss_pred             CccCCCCCCcc
Q psy14694         64 PYKCFVCPYRS   74 (102)
Q Consensus        64 ~~~c~~c~~~f   74 (102)
                      ..+|..|+..|
T Consensus        25 ~vrC~~C~~~f   35 (37)
T PF13719_consen   25 KVRCPKCGHVF   35 (37)
T ss_pred             EEECCCCCcEe
Confidence            34455554443

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=94.19  E-value=0.029  Score=23.19  Aligned_cols=10  Identities=20%  Similarity=0.172  Sum_probs=5.0

Q ss_pred             cccccccccc
Q psy14694         92 QLRFKKIRIA  101 (102)
Q Consensus        92 ~~~C~~c~~~  101 (102)
                      ...|+.|+..
T Consensus        25 ~v~C~~C~~~   34 (38)
T TIGR02098        25 KVRCGKCGHV   34 (38)
T ss_pred             EEECCCCCCE
Confidence            3445555543

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>smart00834 CxxC_CXXC_SSSS Putative regulatory protein

Probab=94.18  E-value=0.019  Score=24.05  Aligned_cols=11  Identities=27%  Similarity=0.630  Sum_probs=5.6

Q ss_pred             ccCCCCCCccC
Q psy14694         65 YKCFVCPYRSN   75 (102)
Q Consensus        65 ~~c~~c~~~f~   75 (102)
                      |+|..||..|.
T Consensus         6 y~C~~Cg~~fe   16 (41)
T smart00834        6 YRCEDCGHTFE   16 (41)
T ss_pred             EEcCCCCCEEE
Confidence            45555555444

CxxC_CXXC_SSSS represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria. The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

>TIGR02605 CxxC_CxxC_SSSS putative regulatory protein, FmdB family

Probab=94.15  E-value=0.02  Score=25.48  Aligned_cols=11  Identities=36%  Similarity=0.781  Sum_probs=6.9

Q ss_pred             eeCCCCCCCCC
Q psy14694         37 YDCFMCPYRTP   47 (102)
Q Consensus        37 ~~c~~c~~~~~   47 (102)
                      |.|..|+..|.
T Consensus         6 y~C~~Cg~~fe   16 (52)
T TIGR02605         6 YRCTACGHRFE   16 (52)
T ss_pred             EEeCCCCCEeE
Confidence            56666666554

This model represents a region of about 50 amino acids found in a number of small proteins in a wide range of bacteria. The region begins usually with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One member of this family is has been noted as a putative regulatory protein, designated FmdB (PubMed:8841393). Most members of this family have a C-terminal region containing highly degenerate sequence, such as SSTSESTKSSGSSGSSGSSESKASGSTEKSTSSTTAAAAV in Mycobacterium tuberculosis and VAVGGSAPAPSPAPRAGGGGGGCCGGGCCG in Streptomyces avermitilis. These low complexity regions, which are not included in the model, resemble low-complexity C-terminal regions of some heterocycle-containing bacteriocin precursors.

>KOG2186|consensus

Probab=93.53  E-value=0.035  Score=32.94  Aligned_cols=49  Identities=12%  Similarity=0.304  Sum_probs=35.8

Q ss_pred             ceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhhhhhhhhc
Q psy14694         36 KYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQ   87 (102)
Q Consensus        36 ~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~   87 (102)
                      .|+|..||....- ..+..|+..-.+ ..|.|..|++.|.+ ..+..|..--
T Consensus         3 ~FtCnvCgEsvKK-p~vekH~srCrn-~~fSCIDC~k~F~~-~sYknH~kCI   51 (276)
T KOG2186|consen    3 FFTCNVCGESVKK-PQVEKHMSRCRN-AYFSCIDCGKTFER-VSYKNHTKCI   51 (276)
T ss_pred             EEehhhhhhhccc-cchHHHHHhccC-CeeEEeeccccccc-chhhhhhhhc
Confidence            4789999887654 456678876555 66899999999988 5566776543

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=93.42  E-value=0.068  Score=21.98  Aligned_cols=9  Identities=22%  Similarity=0.231  Sum_probs=4.1

Q ss_pred             ccccccccc
Q psy14694         92 QLRFKKIRI  100 (102)
Q Consensus        92 ~~~C~~c~~  100 (102)
                      ..+|+.|+.
T Consensus        25 ~v~C~~C~~   33 (36)
T PF13717_consen   25 KVRCSKCGH   33 (36)
T ss_pred             EEECCCCCC
Confidence            344444443

>PHA00626 hypothetical protein

Probab=93.42  E-value=0.041  Score=24.88  Aligned_cols=15  Identities=27%  Similarity=0.744  Sum_probs=10.4

Q ss_pred             CCccCCCCCCccCCc
Q psy14694         63 RPYKCFVCPYRSNQR   77 (102)
Q Consensus        63 ~~~~c~~c~~~f~~~   77 (102)
                      ..|+|..||..|+..
T Consensus        22 nrYkCkdCGY~ft~~   36 (59)
T PHA00626         22 DDYVCCDCGYNDSKD   36 (59)
T ss_pred             cceEcCCCCCeechh
Confidence            457888888777643

>PRK00398 rpoP DNA-directed RNA polymerase subunit P; Provisional

Probab=93.12  E-value=0.034  Score=24.14  Aligned_cols=12  Identities=25%  Similarity=0.694  Sum_probs=6.5

Q ss_pred             ceeCCCCCCCCC
Q psy14694         36 KYDCFMCPYRTP   47 (102)
Q Consensus        36 ~~~c~~c~~~~~   47 (102)
                      .|.|..||..+.
T Consensus         3 ~y~C~~CG~~~~   14 (46)
T PRK00398          3 EYKCARCGREVE   14 (46)
T ss_pred             EEECCCCCCEEE
Confidence            355666665443

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=92.92  E-value=0.035  Score=34.81  Aligned_cols=61  Identities=21%  Similarity=0.416  Sum_probs=49.9

Q ss_pred             CccCCccccccccCHHHHHHHHh--hhccccccCCC--CceeCC--CCCCCCCCcchHHHHhhhhcCCCCccCC
Q psy14694          1 ILKCTHCKVDLNLDTEIILQHYK--LCSEGARQSSR--KKYDCF--MCPYRTPYSGTMRRHIRAHIGDRPYKCF   68 (102)
Q Consensus         1 ~~~c~~c~~~f~~~~~~l~~h~~--~~~~~~~~~~~--~~~~c~--~c~~~~~~~~~l~~h~~~h~~~~~~~c~   68 (102)
                      ++.|..|...|. ....+..|.+  .|.      ++  +++.|+  .|++.|.....+..|...|.+..+..+.
T Consensus       289 ~~~~~~~~~~~s-~~~~l~~~~~~~~h~------~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  355 (467)
T COG5048         289 PIKSKQCNISFS-RSSPLTRHLRSVNHS------GESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEK  355 (467)
T ss_pred             CCCCccccCCcc-ccccccccccccccc------cccCCceeeeccCCCccccccccccCCcccccCCCccccc
Confidence            356778888887 7888888888  566      88  899999  7999999999999999988877765553

>PF07754 DUF1610: Domain of unknown function (DUF1610); InterPro: IPR011668 This domain is found in archaeal species

Probab=92.65  E-value=0.044  Score=20.46  Aligned_cols=9  Identities=0%  Similarity=-0.027  Sum_probs=6.1

Q ss_pred             ccccccccc
Q psy14694         92 QLRFKKIRI  100 (102)
Q Consensus        92 ~~~C~~c~~  100 (102)
                      .|.||.||+
T Consensus        16 ~f~CPnCG~   24 (24)
T PF07754_consen   16 PFPCPNCGF   24 (24)
T ss_pred             eEeCCCCCC
Confidence            577777764

It is likely to bind zinc via its four well-conserved cysteine residues.

>COG3357 Predicted transcriptional regulator containing an HTH domain fused to a Zn-ribbon [Transcription]

Probab=92.60  E-value=0.082  Score=26.41  Aligned_cols=27  Identities=22%  Similarity=0.450  Sum_probs=16.2

Q ss_pred             CCccCCCCCCccCCchhhhhhhhhcCCCCcccccccc
Q psy14694         63 RPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKIR   99 (102)
Q Consensus        63 ~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c~   99 (102)
                      +|-.|..||+.|.+.          ...+|-.||.|.
T Consensus        57 ~Pa~CkkCGfef~~~----------~ik~pSRCP~CK   83 (97)
T COG3357          57 RPARCKKCGFEFRDD----------KIKKPSRCPKCK   83 (97)
T ss_pred             cChhhcccCcccccc----------ccCCcccCCcch
Confidence            466777777777652          113466677664

>smart00659 RPOLCX RNA polymerase subunit CX

Probab=92.57  E-value=0.089  Score=22.72  Aligned_cols=26  Identities=27%  Similarity=0.582  Sum_probs=14.7

Q ss_pred             eeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCc
Q psy14694         37 YDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYR   73 (102)
Q Consensus        37 ~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~   73 (102)
                      |.|..||..+...           ...+..|++||..
T Consensus         3 Y~C~~Cg~~~~~~-----------~~~~irC~~CG~r   28 (44)
T smart00659        3 YICGECGRENEIK-----------SKDVVRCRECGYR   28 (44)
T ss_pred             EECCCCCCEeecC-----------CCCceECCCCCce
Confidence            5677776655432           1244677777643

present in RNA polymerase I, II and III

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=92.24  E-value=0.12  Score=28.70  Aligned_cols=19  Identities=16%  Similarity=0.177  Sum_probs=8.6

Q ss_pred             CCceeCCCCCCCCCCcchH
Q psy14694         34 RKKYDCFMCPYRTPYSGTM   52 (102)
Q Consensus        34 ~~~~~c~~c~~~~~~~~~l   52 (102)
                      ...|.|+.|+..|+...++
T Consensus       107 ~~~Y~Cp~c~~r~tf~eA~  125 (158)
T TIGR00373       107 NMFFICPNMCVRFTFNEAM  125 (158)
T ss_pred             CCeEECCCCCcEeeHHHHH
Confidence            3444455555444444333

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>PF13240 zinc_ribbon_2: zinc-ribbon domain

Probab=91.85  E-value=0.11  Score=19.07  Aligned_cols=7  Identities=0%  Similarity=-0.140  Sum_probs=4.0

Q ss_pred             ccccccc
Q psy14694         95 FKKIRIA  101 (102)
Q Consensus        95 C~~c~~~  101 (102)
                      |+.||..
T Consensus        16 C~~CG~~   22 (23)
T PF13240_consen   16 CPNCGTP   22 (23)
T ss_pred             hhhhCCc
Confidence            6666654

>smart00531 TFIIE Transcription initiation factor IIE

Probab=91.74  E-value=0.18  Score=27.64  Aligned_cols=34  Identities=15%  Similarity=0.155  Sum_probs=16.8

Q ss_pred             CCccCCCCCCccCCchhhhhhhhhcCCCCccccccccc
Q psy14694         63 RPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKIRI  100 (102)
Q Consensus        63 ~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c~~  100 (102)
                      .-|.|+.|+..|.....+.. .  .. +..|.||.||.
T Consensus        98 ~~Y~Cp~C~~~y~~~ea~~~-~--d~-~~~f~Cp~Cg~  131 (147)
T smart00531       98 AYYKCPNCQSKYTFLEANQL-L--DM-DGTFTCPRCGE  131 (147)
T ss_pred             cEEECcCCCCEeeHHHHHHh-c--CC-CCcEECCCCCC
Confidence            34667777766664332211 0  11 22267777764

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=91.11  E-value=0.18  Score=28.64  Aligned_cols=13  Identities=23%  Similarity=0.424  Sum_probs=6.2

Q ss_pred             ccCCCCCCccCCc
Q psy14694         65 YKCFVCPYRSNQR   77 (102)
Q Consensus        65 ~~c~~c~~~f~~~   77 (102)
                      |.|+.|+..|+..
T Consensus       118 Y~Cp~C~~rytf~  130 (178)
T PRK06266        118 FFCPNCHIRFTFD  130 (178)
T ss_pred             EECCCCCcEEeHH
Confidence            4455555444443

>PF14353 CpXC: CpXC protein

Probab=90.97  E-value=0.094  Score=27.93  Aligned_cols=10  Identities=20%  Similarity=0.394  Sum_probs=5.4

Q ss_pred             eCCCCCCCCC
Q psy14694         38 DCFMCPYRTP   47 (102)
Q Consensus        38 ~c~~c~~~~~   47 (102)
                      +|+.|+..|.
T Consensus         3 tCP~C~~~~~   12 (128)
T PF14353_consen    3 TCPHCGHEFE   12 (128)
T ss_pred             CCCCCCCeeE
Confidence            4566665543

>KOG2186|consensus

Probab=90.75  E-value=0.16  Score=30.31  Aligned_cols=46  Identities=15%  Similarity=0.464  Sum_probs=35.7

Q ss_pred             ccCCccccccccCHHHHHHHHhhhccccccCCCCceeCCCCCCCCCCcchHHHHhh
Q psy14694          2 LKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIR   57 (102)
Q Consensus         2 ~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~   57 (102)
                      |.|..||....  ...+..|+-..+      + ..|.|..|+..|.. ..+..|..
T Consensus         4 FtCnvCgEsvK--Kp~vekH~srCr------n-~~fSCIDC~k~F~~-~sYknH~k   49 (276)
T KOG2186|consen    4 FTCNVCGESVK--KPQVEKHMSRCR------N-AYFSCIDCGKTFER-VSYKNHTK   49 (276)
T ss_pred             Eehhhhhhhcc--ccchHHHHHhcc------C-CeeEEeeccccccc-chhhhhhh
Confidence            67899998874  456677887776      5 67999999999988 66667754

>KOG2893|consensus

Probab=90.65  E-value=0.1  Score=30.92  Aligned_cols=41  Identities=27%  Similarity=0.639  Sum_probs=28.5

Q ss_pred             CCccccccccCHHHHHHHHhhhccccccCCCCceeCCCCCCCCCCcchHHHH
Q psy14694          4 CTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRH   55 (102)
Q Consensus         4 c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h   55 (102)
                      |=.|++.|. +..-|++|++.          +.|.|-+|.+...+-..|..|
T Consensus        13 cwycnrefd-dekiliqhqka----------khfkchichkkl~sgpglsih   53 (341)
T KOG2893|consen   13 CWYCNREFD-DEKILIQHQKA----------KHFKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             eeecccccc-hhhhhhhhhhh----------ccceeeeehhhhccCCCceee
Confidence            446888887 77777777654          457788888776666666555

>COG1996 RPC10 DNA-directed RNA polymerase, subunit RPC10 (contains C4-type Zn-finger) [Transcription]

Probab=90.13  E-value=0.14  Score=22.61  Aligned_cols=12  Identities=25%  Similarity=0.669  Sum_probs=7.2

Q ss_pred             CceeCCCCCCCC
Q psy14694         35 KKYDCFMCPYRT   46 (102)
Q Consensus        35 ~~~~c~~c~~~~   46 (102)
                      ..|.|..|++.+
T Consensus         5 ~~Y~C~~Cg~~~   16 (49)
T COG1996           5 MEYKCARCGREV   16 (49)
T ss_pred             EEEEhhhcCCee
Confidence            346666666655

>PF13451 zf-trcl: Probable zinc-binding domain

Probab=89.74  E-value=0.13  Score=22.72  Aligned_cols=15  Identities=13%  Similarity=0.191  Sum_probs=8.2

Q ss_pred             CCccCCCCCCccCCc
Q psy14694         63 RPYKCFVCPYRSNQR   77 (102)
Q Consensus        63 ~~~~c~~c~~~f~~~   77 (102)
                      +++.|..||..|...
T Consensus         3 k~l~C~dCg~~FvfT   17 (49)
T PF13451_consen    3 KTLTCKDCGAEFVFT   17 (49)
T ss_pred             eeEEcccCCCeEEEe
Confidence            445566666555443

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=89.60  E-value=0.35  Score=25.17  Aligned_cols=17  Identities=18%  Similarity=0.336  Sum_probs=7.9

Q ss_pred             CCCceeCCCCCCCCCCc
Q psy14694         33 SRKKYDCFMCPYRTPYS   49 (102)
Q Consensus        33 ~~~~~~c~~c~~~~~~~   49 (102)
                      ++.|..|+.||..|...
T Consensus        23 nk~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   23 NKDPIVCPKCGTEFPPE   39 (108)
T ss_pred             CCCCccCCCCCCccCcc
Confidence            33444555555544433

The function of members of this family is unknown.

>COG1997 RPL43A Ribosomal protein L37AE/L43A [Translation, ribosomal structure and biogenesis]

Probab=88.36  E-value=0.35  Score=24.04  Aligned_cols=33  Identities=21%  Similarity=0.310  Sum_probs=19.4

Q ss_pred             CceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCc
Q psy14694         35 KKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQR   77 (102)
Q Consensus        35 ~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~   77 (102)
                      ..+.|+.|++.        .+.++  +...|+|..|+..|.-.
T Consensus        34 ~~~~Cp~C~~~--------~VkR~--a~GIW~C~kCg~~fAGg   66 (89)
T COG1997          34 AKHVCPFCGRT--------TVKRI--ATGIWKCRKCGAKFAGG   66 (89)
T ss_pred             cCCcCCCCCCc--------ceeee--ccCeEEcCCCCCeeccc
Confidence            45677777654        11232  23467888888777644

>PRK03824 hypA hydrogenase nickel incorporation protein; Provisional

Probab=87.48  E-value=0.32  Score=26.33  Aligned_cols=12  Identities=25%  Similarity=0.395  Sum_probs=6.4

Q ss_pred             ccCCCCCCccCC
Q psy14694         65 YKCFVCPYRSNQ   76 (102)
Q Consensus        65 ~~c~~c~~~f~~   76 (102)
                      +.|..||..|..
T Consensus        71 ~~C~~CG~~~~~   82 (135)
T PRK03824         71 LKCRNCGNEWSL   82 (135)
T ss_pred             EECCCCCCEEec
Confidence            556666655543

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=87.48  E-value=0.17  Score=22.91  Aligned_cols=26  Identities=15%  Similarity=0.220  Sum_probs=19.9

Q ss_pred             CCCceeCCCCCCCCCCcchHHHHhhh
Q psy14694         33 SRKKYDCFMCPYRTPYSGTMRRHIRA   58 (102)
Q Consensus        33 ~~~~~~c~~c~~~~~~~~~l~~h~~~   58 (102)
                      |+..+.|+.|++.|........|...
T Consensus        14 GE~~lrCPRC~~~FR~~K~Y~RHVNK   39 (65)
T COG4049          14 GEEFLRCPRCGMVFRRRKDYIRHVNK   39 (65)
T ss_pred             CceeeeCCchhHHHHHhHHHHHHhhH
Confidence            67778888888888877777777653

>KOG1146|consensus

Probab=87.37  E-value=0.28  Score=35.80  Aligned_cols=24  Identities=33%  Similarity=0.731  Sum_probs=14.4

Q ss_pred             CCccCCCCCCccCCchhhhhhhhh
Q psy14694         63 RPYKCFVCPYRSNQRANLMSHPLV   86 (102)
Q Consensus        63 ~~~~c~~c~~~f~~~~~l~~h~~~   86 (102)
                      ++|.|..|..++....+|-+|+..
T Consensus       517 ~p~~C~~C~~stttng~LsihlqS  540 (1406)
T KOG1146|consen  517 KPYPCRACNYSTTTNGNLSIHLQS  540 (1406)
T ss_pred             CcccceeeeeeeecchHHHHHHHH
Confidence            456666666666666666666543

>PF05443 ROS_MUCR: ROS/MUCR transcriptional regulator protein; InterPro: IPR008807 This family consists of several ROS/MUCR transcriptional regulator proteins

Probab=84.94  E-value=0.48  Score=25.62  Aligned_cols=27  Identities=15%  Similarity=0.161  Sum_probs=16.7

Q ss_pred             CCccCCCCCCccCCchhhhhhhhhcCCCCc
Q psy14694         63 RPYKCFVCPYRSNQRANLMSHPLVQISDEQ   92 (102)
Q Consensus        63 ~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~   92 (102)
                      .-..|-+||+.|..   |.+|++.|+|--|
T Consensus        71 d~i~clecGk~~k~---LkrHL~~~~gltp   97 (132)
T PF05443_consen   71 DYIICLECGKKFKT---LKRHLRTHHGLTP   97 (132)
T ss_dssp             S-EE-TBT--EESB---HHHHHHHTT-S-H
T ss_pred             CeeEEccCCcccch---HHHHHHHccCCCH
Confidence            34679999999886   5899999877544

The ros chromosomal gene is present in octopine and nopaline strains of Agrobacterium tumefaciens as well as in Rhizobium meliloti (Sinorhizobium meliloti). This gene encodes a 15.5 kDa protein that specifically represses the virC and virD operons in the virulence region of the Ti plasmid [] and is necessary for succinoglycan production []. S. meliloti can produce two types of acidic exopolysaccharides, succinoglycan and galactoglucan, that are interchangeable for infection of Medicago sativa (Alfalfa) nodules. MucR from S. meliloti acts as a transcriptional repressor that blocks the expression of the exp genes responsible for galactoglucan production therefore allowing the exclusive production of succinoglycan [].; GO: 0003677 DNA binding, 0008270 zinc ion binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2JSP_A.

>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines

Probab=84.40  E-value=0.48  Score=17.98  Aligned_cols=9  Identities=0%  Similarity=-0.256  Sum_probs=4.5

Q ss_pred             ccccccccC
Q psy14694         94 RFKKIRIAV  102 (102)
Q Consensus        94 ~C~~c~~~~  102 (102)
                      .|+.||-.|
T Consensus        16 ~Cp~CG~~F   24 (26)
T PF10571_consen   16 FCPHCGYDF   24 (26)
T ss_pred             cCCCCCCCC
Confidence            355555544

Several members are annotated as putative helicases.

>KOG1146|consensus

Probab=84.28  E-value=0.37  Score=35.21  Aligned_cols=27  Identities=19%  Similarity=0.159  Sum_probs=16.6

Q ss_pred             cCCCCccCCCCCCccCCchhhhhhhhh
Q psy14694         60 IGDRPYKCFVCPYRSNQRANLMSHPLV   86 (102)
Q Consensus        60 ~~~~~~~c~~c~~~f~~~~~l~~h~~~   86 (102)
                      .-.+.++|++|+-.+.....|..|+|+
T Consensus       461 S~~kt~~cpkc~~~yk~a~~L~vhmRs  487 (1406)
T KOG1146|consen  461 SFFKTLKCPKCNWHYKLAQTLGVHMRS  487 (1406)
T ss_pred             cccccccCCccchhhhhHHHhhhcccc
Confidence            334556666666666666666666665

>PF03604 DNA_RNApol_7kD: DNA directed RNA polymerase, 7 kDa subunit; InterPro: IPR006591 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates

Probab=84.24  E-value=0.9  Score=18.17  Aligned_cols=7  Identities=29%  Similarity=0.842  Sum_probs=3.6

Q ss_pred             ccCCCCC
Q psy14694         65 YKCFVCP   71 (102)
Q Consensus        65 ~~c~~c~   71 (102)
                      ..|.+||
T Consensus        18 irC~~CG   24 (32)
T PF03604_consen   18 IRCPECG   24 (32)
T ss_dssp             SSBSSSS
T ss_pred             EECCcCC
Confidence            4555555

Each class of RNA polymerase is assembled from 9 to 15 different polypeptides. Rbp10 (RNA polymerase CX) is a domain found in RNA polymerase subunit 10; present in RNA polymerase I, II and III.; GO: 0003677 DNA binding, 0003899 DNA-directed RNA polymerase activity, 0006351 transcription, DNA-dependent; PDB: 2PMZ_Z 3HKZ_X 2NVX_L 3S1Q_L 2JA6_L 3S17_L 3HOW_L 3HOV_L 3PO2_L 3HOZ_L ....

>PF12760 Zn_Tnp_IS1595: Transposase zinc-ribbon domain; InterPro: IPR024442 This zinc binding domain is found in a range of transposase proteins such as ISSPO8, ISSOD11, ISRSSP2 etc

Probab=83.73  E-value=0.61  Score=20.17  Aligned_cols=11  Identities=27%  Similarity=0.262  Sum_probs=6.6

Q ss_pred             CCccccccccc
Q psy14694         90 DEQLRFKKIRI  100 (102)
Q Consensus        90 ~~~~~C~~c~~  100 (102)
                      ...|+|..|++
T Consensus        35 ~~~~~C~~C~~   45 (46)
T PF12760_consen   35 RGRYRCKACRK   45 (46)
T ss_pred             CCeEECCCCCC
Confidence            45566666653

It may be a zinc-binding beta ribbon domain that could bind DNA.

>smart00614 ZnF_BED BED zinc finger

Probab=83.65  E-value=0.84  Score=20.06  Aligned_cols=21  Identities=29%  Similarity=0.433  Sum_probs=12.2

Q ss_pred             ccCCCCCCccCCc-----hhhhhhhh
Q psy14694         65 YKCFVCPYRSNQR-----ANLMSHPL   85 (102)
Q Consensus        65 ~~c~~c~~~f~~~-----~~l~~h~~   85 (102)
                      ..|..|++.+...     ++|.+|++
T Consensus        19 a~C~~C~~~l~~~~~~gTs~L~rHl~   44 (50)
T smart00614       19 AKCKYCGKKLSRSSKGGTSNLRRHLR   44 (50)
T ss_pred             EEecCCCCEeeeCCCCCcHHHHHHHH
Confidence            4566666655433     56666666

DNA-binding domain in chromatin-boundary-element-binding proteins and transposases

>COG1773 Rubredoxin [Energy production and conversion]

Probab=83.02  E-value=0.98  Score=20.51  Aligned_cols=13  Identities=23%  Similarity=0.687  Sum_probs=6.7

Q ss_pred             ceeCCCCCCCCCC
Q psy14694         36 KYDCFMCPYRTPY   48 (102)
Q Consensus        36 ~~~c~~c~~~~~~   48 (102)
                      .+.|..||..|..
T Consensus         3 ~~~C~~CG~vYd~   15 (55)
T COG1773           3 RWRCSVCGYVYDP   15 (55)
T ss_pred             ceEecCCceEecc
Confidence            3555555555443

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=82.85  E-value=0.65  Score=19.73  Aligned_cols=24  Identities=25%  Similarity=0.314  Sum_probs=12.5

Q ss_pred             CCCccCCCCCCccCC----chhhhhhhh
Q psy14694         62 DRPYKCFVCPYRSNQ----RANLMSHPL   85 (102)
Q Consensus        62 ~~~~~c~~c~~~f~~----~~~l~~h~~   85 (102)
                      .....|..|++.+..    .++|..|++
T Consensus        14 ~~~a~C~~C~~~~~~~~~~ts~l~~HL~   41 (45)
T PF02892_consen   14 KKKAKCKYCGKVIKYSSGGTSNLKRHLK   41 (45)
T ss_dssp             SS-EEETTTTEE-----SSTHHHHHHHH
T ss_pred             cCeEEeCCCCeEEeeCCCcHHHHHHhhh
Confidence            344667777766554    366667763

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>PF08274 PhnA_Zn_Ribbon: PhnA Zinc-Ribbon ; InterPro: IPR013987 The PhnA protein family includes the uncharacterised Escherichia coli protein PhnA and its homologues

Probab=82.78  E-value=0.51  Score=18.61  Aligned_cols=8  Identities=13%  Similarity=-0.076  Sum_probs=4.5

Q ss_pred             cccccccc
Q psy14694         92 QLRFKKIR   99 (102)
Q Consensus        92 ~~~C~~c~   99 (102)
                      .|.|+.|+
T Consensus        19 ~~vCp~C~   26 (30)
T PF08274_consen   19 LLVCPECG   26 (30)
T ss_dssp             SEEETTTT
T ss_pred             EEeCCccc
Confidence            45566554

The E. coli phnA gene is part of a large operon associated with alkylphosphonate uptake and carbon-phosphorus bond cleavage []. The protein is not related to the characterised phosphonoacetate hydrolase designated PhnA []. This entry represents the N-terminal domain of PhnA, which is predicted to form a zinc-ribbon.; PDB: 2AKL_A.

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=82.33  E-value=1.3  Score=28.00  Aligned_cols=51  Identities=18%  Similarity=0.170  Sum_probs=32.2

Q ss_pred             CCCcchHHHHhhhhc---CCCC-ccCCCCCCccCCchhhhhhhhhcCCCCcccccc
Q psy14694         46 TPYSGTMRRHIRAHI---GDRP-YKCFVCPYRSNQRANLMSHPLVQISDEQLRFKK   97 (102)
Q Consensus        46 ~~~~~~l~~h~~~h~---~~~~-~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~   97 (102)
                      .+....|..|...-.   |-+. -.|..|...|.....|..|.|..+ ++-|-|+.
T Consensus       198 lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC~~~FYdDDEL~~HcR~~H-E~ChICD~  252 (493)
T COG5236         198 LFRSSTLRDHKNGGLEEEGFKGHPLCIFCKIYFYDDDELRRHCRLRH-EACHICDM  252 (493)
T ss_pred             eeecccccccccCCccccCcCCCchhhhccceecChHHHHHHHHhhh-hhhhhhhc
Confidence            444566666665422   2232 258888888999999999988755 44455544

>TIGR02300 FYDLN_acid conserved hypothetical protein TIGR02300

Probab=81.88  E-value=1.4  Score=23.60  Aligned_cols=17  Identities=12%  Similarity=-0.039  Sum_probs=9.2

Q ss_pred             CCCceeCCCCCCCCCCc
Q psy14694         33 SRKKYDCFMCPYRTPYS   49 (102)
Q Consensus        33 ~~~~~~c~~c~~~~~~~   49 (102)
                      ++.|..|+.||..|...
T Consensus        23 nk~p~vcP~cg~~~~~~   39 (129)
T TIGR02300        23 NRRPAVSPYTGEQFPPE   39 (129)
T ss_pred             CCCCccCCCcCCccCcc
Confidence            44555666666555443

Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.

>PF01780 Ribosomal_L37ae: Ribosomal L37ae protein family; InterPro: IPR002674 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms

Probab=81.65  E-value=0.31  Score=24.48  Aligned_cols=32  Identities=25%  Similarity=0.506  Sum_probs=17.2

Q ss_pred             CceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCC
Q psy14694         35 KKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQ   76 (102)
Q Consensus        35 ~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~   76 (102)
                      ..|.|+.|++.-     +   .+.-.  -.|+|..|++.|.-
T Consensus        34 ~ky~Cp~Cgk~~-----v---kR~a~--GIW~C~~C~~~~AG   65 (90)
T PF01780_consen   34 AKYTCPFCGKTS-----V---KRVAT--GIWKCKKCGKKFAG   65 (90)
T ss_dssp             S-BEESSSSSSE-----E---EEEET--TEEEETTTTEEEE-
T ss_pred             CCCcCCCCCCce-----e---EEeee--EEeecCCCCCEEeC
Confidence            457777777642     1   12222  34778888776653

The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This ribosomal protein is found in archaebacteria and eukaryotes []. Ribosomal protein L37 has a single zinc finger-like motif of the C2-C2 type [].; GO: 0003735 structural constituent of ribosome, 0006412 translation, 0005622 intracellular, 0005840 ribosome; PDB: 4A1E_Y 4A17_Y 4A1C_Y 4A1A_Y 3O58_g 3IZS_m 3O5H_g 1S1I_9 3IZR_m 1YSH_D ....

>COG3091 SprT Zn-dependent metalloprotease, SprT family [General function prediction only]

Probab=81.27  E-value=0.75  Score=25.44  Aligned_cols=33  Identities=24%  Similarity=0.355  Sum_probs=24.3

Q ss_pred             CCccCCCCCCccCCchhhhhhhhhcCCCCccccccccc
Q psy14694         63 RPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKIRI  100 (102)
Q Consensus        63 ~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c~~  100 (102)
                      -+|.|. |+..+.+.   .+|-.+-.|+ .|.|..|+-
T Consensus       116 ~~Y~C~-C~q~~l~~---RRhn~~~~g~-~YrC~~C~g  148 (156)
T COG3091         116 YPYRCQ-CQQHYLRI---RRHNTVRRGE-VYRCGKCGG  148 (156)
T ss_pred             eeEEee-cCCccchh---hhcccccccc-eEEeccCCc
Confidence            468898 98776653   4566666777 899999974

>TIGR00100 hypA hydrogenase nickel insertion protein HypA

Probab=81.11  E-value=0.81  Score=24.06  Aligned_cols=12  Identities=17%  Similarity=0.409  Sum_probs=7.5

Q ss_pred             ccCCCCCCccCC
Q psy14694         65 YKCFVCPYRSNQ   76 (102)
Q Consensus        65 ~~c~~c~~~f~~   76 (102)
                      ..|..|+..|..
T Consensus        71 ~~C~~Cg~~~~~   82 (115)
T TIGR00100        71 CECEDCSEEVSP   82 (115)
T ss_pred             EEcccCCCEEec
Confidence            567777766554

In Hpylori, hypA mutant abolished hydrogenase activity and decrease in urease activity. Nickel supplementation in media restored urease activity and partial hydrogenase activity. HypA probably involved in inserting Ni in enzymes.

>PRK09678 DNA-binding transcriptional regulator; Provisional

Probab=80.83  E-value=0.71  Score=22.22  Aligned_cols=41  Identities=12%  Similarity=0.220  Sum_probs=23.3

Q ss_pred             eeCCCCCCCCCCcchHHHHhhhhcCCCCccCC--CCCCccCCchh
Q psy14694         37 YDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCF--VCPYRSNQRAN   79 (102)
Q Consensus        37 ~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~--~c~~~f~~~~~   79 (102)
                      +.|+.|+..-.....-...  ...-++.++|.  +||.+|.....
T Consensus         2 m~CP~Cg~~a~irtSr~~s--~~~~~~Y~qC~N~eCg~tF~t~es   44 (72)
T PRK09678          2 FHCPLCQHAAHARTSRYIT--DTTKERYHQCQNVNCSATFITYES   44 (72)
T ss_pred             ccCCCCCCccEEEEChhcC--hhhheeeeecCCCCCCCEEEEEEE
Confidence            4678887654222221111  12345668897  89999876543

>smart00440 ZnF_C2C2 C2C2 Zinc finger

Probab=80.53  E-value=0.82  Score=19.22  Aligned_cols=9  Identities=44%  Similarity=0.966  Sum_probs=4.5

Q ss_pred             ccCCCCCCc
Q psy14694         65 YKCFVCPYR   73 (102)
Q Consensus        65 ~~c~~c~~~   73 (102)
                      |.|..|+..
T Consensus        29 y~C~~C~~~   37 (40)
T smart00440       29 YVCTKCGHR   37 (40)
T ss_pred             EEeCCCCCE
Confidence            455555543

Nucleic-acid-binding motif in transcriptional elongation factor TFIIS and RNA polymerases.

>PF11789 zf-Nse: Zinc-finger of the MIZ type in Nse subunit; PDB: 2YU4_A 3HTK_C

Probab=80.45  E-value=0.64  Score=21.22  Aligned_cols=33  Identities=18%  Similarity=0.110  Sum_probs=18.9

Q ss_pred             CCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         62 DRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        62 ~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      +.|+....|+..|...+.+. ++   .......||+-
T Consensus        22 ~~PV~s~~C~H~fek~aI~~-~i---~~~~~~~CPv~   54 (57)
T PF11789_consen   22 EDPVKSKKCGHTFEKEAILQ-YI---QRNGSKRCPVA   54 (57)
T ss_dssp             SSEEEESSS--EEEHHHHHH-HC---TTTS-EE-SCC
T ss_pred             hCCcCcCCCCCeecHHHHHH-HH---HhcCCCCCCCC
Confidence            35677778999998776543 33   34567788873

>COG0068 HypF Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones]

Probab=80.04  E-value=0.39  Score=32.95  Aligned_cols=56  Identities=16%  Similarity=0.213  Sum_probs=36.8

Q ss_pred             eCCCCCCCCCCcchHHHHhhhhcCCCCc-cCCCCCCccCCchhhhhhhhhcCCCCccccccccc
Q psy14694         38 DCFMCPYRTPYSGTMRRHIRAHIGDRPY-KCFVCPYRSNQRANLMSHPLVQISDEQLRFKKIRI  100 (102)
Q Consensus        38 ~c~~c~~~~~~~~~l~~h~~~h~~~~~~-~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c~~  100 (102)
                      .|..||=.|+...+|.- .|..+.-..| .|+.|.+.+..+.+..-|.      +|..||.||-
T Consensus       125 ~CT~CGPRfTIi~alPY-DR~nTsM~~F~lC~~C~~EY~dP~nRRfHA------Qp~aCp~CGP  181 (750)
T COG0068         125 NCTNCGPRFTIIEALPY-DRENTSMADFPLCPFCDKEYKDPLNRRFHA------QPIACPKCGP  181 (750)
T ss_pred             ccCCCCcceeeeccCCC-CcccCccccCcCCHHHHHHhcCcccccccc------ccccCcccCC
Confidence            46678888887777643 3333333333 4888988888886644333      3788999984

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	102
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		8e-06
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		8e-05
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		2e-04
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		4e-04
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		4e-04

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 28/57 (49%)
Query: 35 KKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDE 91
          K Y C  C Y    S ++ +H+R H  +RP+KC +CPY S   + L  H      D 
Sbjct: 35 KPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDS 91

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQIS 89
          +Q  R++Y C  C     +S  + +H R H G++PYKC  C     QR++L+ H  V   
Sbjct: 12 QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTG 71

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 35 KKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDE 91
          K Y C  C     Y G +  H   H G++PY+C +C  + N+ ANL +H  +   ++
Sbjct: 16 KPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEK 72

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 27/57 (47%)
Query: 34 RKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISD 90
           K Y C  C      S  + +H R H G++PYKC  C    +Q + L++H  +  S 
Sbjct: 12 EKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSG 68

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 27/59 (45%)
Query: 32  SSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISD 90
           +  K Y C  C         + RH R H G++PYKC  C    +QRANL +H      +
Sbjct: 45  TGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGE 103

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	102
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	4e-10
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	3e-07
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-05
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-05
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	6e-04
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	3e-05
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	9e-05
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	5e-05
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	6e-04
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	6e-04
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	7e-04
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	8e-04

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 50.6 bits (122), Expect = 4e-10
 Identities = 20/56 (35%), Positives = 26/56 (46%)

Query: 28 GARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSH 83
          G+  SS     C  C Y       +R H R H  DRP+KC  C + + Q +NL  H
Sbjct: 1  GSSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKH 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 42.8 bits (100), Expect = 3e-07
 Identities = 17/48 (35%), Positives = 22/48 (45%)

Query: 36 KYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSH 83
          KY C  C  R      +++HIR H   RPY C  C +    + NL  H
Sbjct: 1  KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKH 48

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 38.9 bits (91), Expect = 1e-05
 Identities = 9/52 (17%), Positives = 19/52 (36%), Gaps = 3/52 (5%)

Query: 35 KKYDCFMCPYRTPYSGTMRRHIRAH---IGDRPYKCFVCPYRSNQRANLMSH 83
              C +C +      ++  H R H   +    + C  C  R  +  ++ +H
Sbjct: 6  SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAH 57

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 38.6 bits (91), Expect = 2e-05
 Identities = 19/49 (38%), Positives = 27/49 (55%)

Query: 35 KKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSH 83
          K Y C  C Y    S ++ +H+R H  +RP+KC +CPY S   + L  H
Sbjct: 35 KPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVH 83

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 35.1 bits (82), Expect = 6e-04
 Identities = 14/49 (28%), Positives = 23/49 (46%)

Query: 35 KKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSH 83
            + C +C         ++ H+R H G +PYKC  C Y +   ++L  H
Sbjct: 7  GPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKH 55

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 37.9 bits (89), Expect = 3e-05
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 50 GTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSH 83
          G+     R H G++PY+C++C  R  Q   +  H
Sbjct: 1  GSSGSSGRTHSGEKPYECYICHARFTQSGTMKMH 34

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 36.7 bits (86), Expect = 9e-05
 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 2/51 (3%)

Query: 35 KKYDCFMCPYRTPYSGTMRRHIRAHIG--DRPYKCFVCPYRSNQRANLMSH 83
          K Y+C++C  R   SGTM+ HI          + C  C     ++++L  H
Sbjct: 14 KPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVH 64

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 102

 Score = 37.8 bits (87), Expect = 5e-05
 Identities = 13/67 (19%), Positives = 23/67 (34%), Gaps = 4/67 (5%)

Query: 21 HYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIR-AHIG---DRPYKCFVCPYRSNQ 76
          H+        +     Y+C  C ++TP       H+   H     +  Y C  C + + +
Sbjct: 3  HHHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKR 62

Query: 77 RANLMSH 83
             L  H
Sbjct: 63 YDALSEH 69

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 34.1 bits (78), Expect = 6e-04
 Identities = 12/45 (26%), Positives = 20/45 (44%)

Query: 26 SEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC 70
          S G+   +RK+  C +C         + RH  +H G++PY     
Sbjct: 2  SSGSSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 34.4 bits (80), Expect = 6e-04
 Identities = 18/49 (36%), Positives = 26/49 (53%)

Query: 35 KKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSH 83
          K Y C  C     Y G +  H   H G++PY+C +C  + N+ ANL +H
Sbjct: 16 KPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH 64

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 33.7 bits (78), Expect = 7e-04
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 55 HIRAHIGDRPYKCFVCPYRSNQRANLMSH 83
             +  G++PYKC  C  R  Q A+L +H
Sbjct: 2  SSGSSGGEKPYKCETCGARFVQVAHLRAH 30

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 34.9 bits (81), Expect = 8e-04
 Identities = 12/35 (34%), Positives = 19/35 (54%)

Query: 49 SGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSH 83
          S  + RH R H G +P++C VC    ++  +L  H
Sbjct: 60 SDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALH 94

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	102
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.96
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.95
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.94
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.94
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.93
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.93
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.93
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.92
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.91
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.91
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.91
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.91
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.91
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.9
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.9
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.9
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.9
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.89
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.88
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.88
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.88
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.87
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.86
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.85
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.85
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.85
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.85
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.85
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.85
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.85
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.85
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.84
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.84
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.84
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.84
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.84
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.83
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.83
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.81
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.81
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.81
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.81
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.79
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.79
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.79
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.78
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.78
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.77
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.77
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.76
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.76
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.74
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.72
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.72
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.72
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.72
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.71
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.71
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.7
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.7
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.69
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.69
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.69
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.69
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.69
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.68
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.68
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.68
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.68
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.68
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.68
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.68
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.68
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.68
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.68
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.68
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.68
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.68
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.68
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.68
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.68
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.68
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.68
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.68
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.68
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.68
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.68
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.67
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.67
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.67
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.67
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.67
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.67
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.67
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.67
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.67
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.67
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.67
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.67
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.67
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.67
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.66
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.66
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.66
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.66
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.66
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.66
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.66
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.66
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.66
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.66
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.66
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.65
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.65
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.64
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.64
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.64
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.63
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.63
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.63
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.63
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.62
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.62
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.62
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.62
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.62
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.62
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.61
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.61
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.61
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.61
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.61
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.61
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.61
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.61
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.61
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.61
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.61
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.6
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.6
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.6
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.6
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.6
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.6
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.6
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.6
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.6
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.6
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.6
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.6
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.6
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.6
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.59
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.59
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.59
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.59
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.59
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.59
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.59
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.59
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.59
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.58
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.58
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.58
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.58
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.57
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.57
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.57
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.57
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.56
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.56
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.56
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.56
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.55
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.55
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.54
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.54
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.54
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.53
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.53
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.53
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.52
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.52
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.49
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.45
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.45
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.45
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.44
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.43
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.43
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.43
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.43
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.43
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.43
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.42
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.42
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.42
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.42
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.42
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.42
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.42
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.42
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.42
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.42
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.42
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.41
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.41
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.41
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.41
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.41
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.41
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.41
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.41
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.41
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.41
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.41
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.41
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.41
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.41
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.41
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.41
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.41
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.41
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.41
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.41
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.4
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.4
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.4
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.4
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.39
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.39
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.39
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.39
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.39
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.39
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.39
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.39
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.39
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.38
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.37
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.37
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.36
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.33
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.32
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.32
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	99.32
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.32
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.32
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.32
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.32
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.31
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.31
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.31
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.31
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.31
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.31
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.31
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.31
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.3
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.3
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.3
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.3
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.3
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.3
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.3
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.29
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.29
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.29
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.29
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.29
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.29
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.29
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.29
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.29
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	99.28
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	99.28
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.28
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.28
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	99.28
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.27
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.27
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.27
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.27
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.27
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.27
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.27
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.27
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.27
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.27
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.26
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.26
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.26
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.24
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.24
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.23
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	99.23
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.23
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.21
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	99.21
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.2
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.18
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.18
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.17
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.16
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.15
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	99.15
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	99.14
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.14
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.13
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	99.12
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	99.12
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.1
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.09
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.08
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	99.02
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.99
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.97
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.97
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.96
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.95
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.95
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.94
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.91
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.91
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.9
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.88
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.86
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.86
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.86
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.86
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.86
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	98.36
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	98.36
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.85
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.84
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.84
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.84
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.83
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.83
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.81
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.81
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.8
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.77
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.76
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.68
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.68
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.68
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.65
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.65
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	98.05
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.61
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.59
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.58
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.58
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.58
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.57
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.57
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.56
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.53
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.53
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.51
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.47
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.84
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.82
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.42
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.41
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.34
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.28
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.46
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.05
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.95
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.81
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	97.3
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.22
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	97.15
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.8
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.61
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.57
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	95.61
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	95.54
1yuz_A	202	Nigerythrin; rubrythrin, rubredoxin, hemerythrin,	94.66
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	94.35
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	94.16
6rxn_A	46	Rubredoxin; electron transfer(iron-sulfur protein)	93.92
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	93.75
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	93.24
4ayb_P	48	DNA-directed RNA polymerase; transferase, multi-su	93.07
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	92.82
2kdx_A	119	HYPA, hydrogenase/urease nickel incorporation prot	92.55
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	92.09
3pwf_A	170	Rubrerythrin; non heme iron peroxidases, oxidative	91.67
1e8j_A	52	Rubredoxin; iron-sulfur-protein, zinc-substitution	90.76
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	90.51
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	89.21
1twf_L	70	ABC10-alpha, DNA-directed RNA polymerases I, II, a	88.16
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	87.73
3h0g_L	63	DNA-directed RNA polymerases I, II, and III subuni	87.39
1vq8_Z	83	50S ribosomal protein L37AE; ribosome 50S, protein	87.3
3a43_A	139	HYPD, hydrogenase nickel incorporation protein HYP	86.65
3jyw_9	72	60S ribosomal protein L43; eukaryotic ribosome, RA	86.36
1lko_A	191	Rubrerythrin all-iron(II) form; reduced form, DIIR	86.32
2kn9_A	81	Rubredoxin; metalloprotein, ssgcid, structural gen	86.08
2lcq_A	165	Putative toxin VAPC6; PIN domain, Zn ribbon domain	86.06
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	84.98
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	83.9
2czr_A	226	TBP-interacting protein; tata-binding protein (TBP	82.95
2djr_A	76	Zinc finger BED domain-containing protein 2; C2H2	80.93

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.96  E-value=3e-30  Score=136.96  Aligned_cols=95  Identities=24%  Similarity=0.380  Sum_probs=89.7

Q ss_pred             CccCCccccccccCHHHHHHHHhhhccccccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhh
Q psy14694          1 ILKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANL   80 (102)
Q Consensus         1 ~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l   80 (102)
                      ||.|+.|++.|. ....|..|+++|.      ++++|.|..|++.|.....|..|+++|+|++||.|.+|++.|...+.|
T Consensus        22 ~y~C~~C~k~F~-~~~~L~~H~~~H~------~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L   94 (133)
T 2lt7_A           22 YYICIVCKRSYV-CLTSLRRHFNIHS------WEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFM   94 (133)
T ss_dssp             EEEETTTCCEES-CHHHHHHHHHHHH------CCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHH
T ss_pred             CeECCCCCCCcC-CHHHHHHHHHHcC------CCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHH
Confidence            589999999999 9999999999998      999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhcCCCC------ccccccccccC
Q psy14694         81 MSHPLVQISDE------QLRFKKIRIAV  102 (102)
Q Consensus        81 ~~h~~~~~~~~------~~~C~~c~~~~  102 (102)
                      ..|+++|++++      +|+|..|++.|
T Consensus        95 ~~H~~~hh~~~p~~~~k~~~C~~C~k~~  122 (133)
T 2lt7_A           95 SSHIKSVHSQDPSGDSKLYRLHPCRSLQ  122 (133)
T ss_dssp             HHHHHHHTCCCTTSSSCCEEECCCCSSC
T ss_pred             HHHhHHhcCCCCCCCCCCeecCCCCchh
Confidence            99999987764      58899999875

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.95  E-value=1.1e-27  Score=125.46  Aligned_cols=95  Identities=14%  Similarity=0.269  Sum_probs=90.5

Q ss_pred             CccCCccccccccCHHHHHHHHhhhccccccCCCCceeCCCCCCCCCCcchHHHHhhh---hcCCCCccCCCCCCccCCc
Q psy14694          1 ILKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRA---HIGDRPYKCFVCPYRSNQR   77 (102)
Q Consensus         1 ~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~---h~~~~~~~c~~c~~~f~~~   77 (102)
                      +|.|+.|++.|. ....|..|++.|.      ++++|.|..|++.|.....|..|+..   +.++++|.|..|++.|...
T Consensus         7 ~~~C~~C~~~f~-~~~~l~~H~~~h~------~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~   79 (124)
T 2dlq_A            7 GVECPTCHKKFL-SKYYLKVHNRKHT------GEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRR   79 (124)
T ss_dssp             SCCCTTTCCCCS-SHHHHHHHHHHHS------SCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSH
T ss_pred             CCCCCCCCCcCC-CHHHHHHHHHhCC------CCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCH
Confidence            689999999998 9999999999988      89999999999999999999999985   5788999999999999999


Q ss_pred             hhhhhhhhhcCCCCccccccccccC
Q psy14694         78 ANLMSHPLVQISDEQLRFKKIRIAV  102 (102)
Q Consensus        78 ~~l~~h~~~~~~~~~~~C~~c~~~~  102 (102)
                      ..|..|+++|++++||.|+.|+++|
T Consensus        80 ~~l~~H~~~h~~~~~~~C~~C~~~f  104 (124)
T 2dlq_A           80 MELRLHMVSHTGEMPYKCSSCSQQF  104 (124)
T ss_dssp             HHHHHHHHHHSSSCSEECSSSCCEE
T ss_pred             HHHHHHHHHcCCCCCccCCCccchh
Confidence            9999999999999999999999986

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.94  E-value=1.1e-27  Score=124.78  Aligned_cols=95  Identities=20%  Similarity=0.430  Sum_probs=91.1

Q ss_pred             CccCCc--cccccccCHHHHHHHHhhhccccccCCCCceeCC--CCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCC
Q psy14694          1 ILKCTH--CKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCF--MCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQ   76 (102)
Q Consensus         1 ~~~c~~--c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~--~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~   76 (102)
                      ||.|..  |++.|. ....|..|++.|.      +++++.|.  .|++.|.....|..|+++|.++++|.|..|++.|..
T Consensus         6 ~~~C~~~~C~~~f~-~~~~l~~H~~~h~------~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~   78 (119)
T 2jp9_A            6 PFMCAYPGCNKRYF-KLSHLQMHSRKHT------GEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSR   78 (119)
T ss_dssp             CBCCCSTTSCCCBS-CHHHHHHHHHHHH------TTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESC
T ss_pred             eeeCCCCCCcchhC-CHHHHHHHHHhhC------CCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCC
Confidence            689986  999999 9999999999988      99999999  799999999999999999999999999999999999


Q ss_pred             chhhhhhhhhcCCCCcccc--ccccccC
Q psy14694         77 RANLMSHPLVQISDEQLRF--KKIRIAV  102 (102)
Q Consensus        77 ~~~l~~h~~~~~~~~~~~C--~~c~~~~  102 (102)
                      ...|..|+++|+++++|.|  +.|+++|
T Consensus        79 ~~~l~~H~~~h~~~~~~~C~~~~C~~~f  106 (119)
T 2jp9_A           79 SDHLKTHTRTHTGEKPFSCRWPSCQKKF  106 (119)
T ss_dssp             HHHHHHHHHHHHTCCCEECCSTTCCCEE
T ss_pred             HHHHHHHHHHhcCCCCeeCCCCCCcccc
Confidence            9999999999999999999  8999987

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.94  E-value=1.1e-27  Score=133.61  Aligned_cols=95  Identities=22%  Similarity=0.453  Sum_probs=73.6

Q ss_pred             CccCCccccccccCHHHHHHHHhhhccccccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhh
Q psy14694          1 ILKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANL   80 (102)
Q Consensus         1 ~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l   80 (102)
                      ||.|+.|++.|. ....|..|++.|.      +++++.|..|++.|.....|..|+++|.++++|.|..|++.|.....|
T Consensus        77 ~~~C~~C~~~f~-~~~~l~~H~~~h~------~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L  149 (190)
T 2i13_A           77 PYKCPECGKSFS-QRANLRAHQRTHT------GEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNL  149 (190)
T ss_dssp             CEECTTTCCEES-CHHHHHHHHHHHH------TCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHH
T ss_pred             CccCcccCCccC-CHHHHHHHHHhcC------CCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHH
Confidence            456677777776 6666777776666      777788888888888888888888888888888888888888888888


Q ss_pred             hhhhhhcCCCCccccccccccC
Q psy14694         81 MSHPLVQISDEQLRFKKIRIAV  102 (102)
Q Consensus        81 ~~h~~~~~~~~~~~C~~c~~~~  102 (102)
                      ..|+++|+++++|.|+.|+++|
T Consensus       150 ~~H~~~H~~~~~~~C~~C~~~f  171 (190)
T 2i13_A          150 HTHQRTHTGEKPYKCPECGKSF  171 (190)
T ss_dssp             HHHHHHHHCCCCEECTTTCCEE
T ss_pred             HHHHHhcCCCCCeECCCCCCcc
Confidence            8888888888888888888765

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.93  E-value=1.1e-26  Score=129.60  Aligned_cols=95  Identities=23%  Similarity=0.470  Sum_probs=81.5

Q ss_pred             CccCCccccccccCHHHHHHHHhhhccccccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhh
Q psy14694          1 ILKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANL   80 (102)
Q Consensus         1 ~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l   80 (102)
                      ||.|+.|++.|. ....|..|++.|.      ++++|.|..|++.|.....|..|++.|.++++|.|..|++.|.....|
T Consensus        49 ~~~C~~C~~~f~-~~~~l~~H~~~h~------~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  121 (190)
T 2i13_A           49 PYKCPECGKSFS-DKKDLTRHQRTHT------GEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHL  121 (190)
T ss_dssp             CEECTTTCCEES-SHHHHHHHHHHHH------CCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHH
T ss_pred             CccCCCcCchhC-CHHHHHHHHHhcC------CCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHH
Confidence            577888888887 8888888888877      888888888888888888888888888888888888888888888888


Q ss_pred             hhhhhhcCCCCccccccccccC
Q psy14694         81 MSHPLVQISDEQLRFKKIRIAV  102 (102)
Q Consensus        81 ~~h~~~~~~~~~~~C~~c~~~~  102 (102)
                      ..|+++|+++++|.|+.|+++|
T Consensus       122 ~~H~~~h~~~~~~~C~~C~~~f  143 (190)
T 2i13_A          122 RAHQRTHTGEKPYKCPECGKSF  143 (190)
T ss_dssp             HHHHHHHHCCCCEECTTTCCEE
T ss_pred             HHHHHHhCCCCCeECCCCCccc
Confidence            8888888888888888888876

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.93  E-value=8.2e-26  Score=118.48  Aligned_cols=94  Identities=20%  Similarity=0.384  Sum_probs=88.1

Q ss_pred             CccCC--ccccccccCHHHHHHHHhhhccccccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCC--CCCccCC
Q psy14694          1 ILKCT--HCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFV--CPYRSNQ   76 (102)
Q Consensus         1 ~~~c~--~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~--c~~~f~~   76 (102)
                      +|.|+  .|++.|. ....|..|++.|       +++++.|..|++.|.....|..|+++|.++++|.|..  |++.|..
T Consensus         5 ~~~C~~~~C~~~f~-~~~~l~~H~~~h-------~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~   76 (124)
T 1ubd_C            5 TIACPHKGCTKMFR-DNSAMRKHLHTH-------GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSL   76 (124)
T ss_dssp             CEECCSTTCCCEES-SHHHHHHHHGGG-------SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESC
T ss_pred             cccCCCCCCcCccC-CHHHHHHHHHHc-------CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCC
Confidence            58898  8999998 999999999876       6789999999999999999999999999999999986  9999999


Q ss_pred             chhhhhhhhhcCCCCccccc--cccccC
Q psy14694         77 RANLMSHPLVQISDEQLRFK--KIRIAV  102 (102)
Q Consensus        77 ~~~l~~h~~~~~~~~~~~C~--~c~~~~  102 (102)
                      ...|..|+++|+++++|.|+  .|+++|
T Consensus        77 ~~~l~~H~~~h~~~~~~~C~~~~C~~~f  104 (124)
T 1ubd_C           77 DFNLRTHVRIHTGDRPYVCPFDGCNKKF  104 (124)
T ss_dssp             HHHHHHHHHHHHCCCCCCCCSTTCCCCC
T ss_pred             HHHHHHHHHHhCCCCceECCCCCCCCcc
Confidence            99999999999999999995  599987

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.93  E-value=3e-25  Score=113.53  Aligned_cols=88  Identities=19%  Similarity=0.385  Sum_probs=84.7

Q ss_pred             CccCCccccccccCHHHHHHHHhhhccccccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhh
Q psy14694          1 ILKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANL   80 (102)
Q Consensus         1 ~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l   80 (102)
                      +|.|..|++.|. ....|..|++.|.      ++++|.|..|++.|.....|..|+++|.++++|.|..|++.|.....|
T Consensus        17 ~~~C~~C~~~f~-~~~~l~~H~~~h~------~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L   89 (106)
T 2ee8_A           17 EFICKFCGRHFT-KSYNLLIHERTHT------DERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTL   89 (106)
T ss_dssp             CCBCSSSCCBCS-SHHHHHHHHHHHC------CSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHH
T ss_pred             CeECCCCCCccC-CHHHHHHHHHHcC------CCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHH
Confidence            689999999998 9999999999988      999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhcCCCCcccc
Q psy14694         81 MSHPLVQISDEQLRF   95 (102)
Q Consensus        81 ~~h~~~~~~~~~~~C   95 (102)
                      ..|+++|+++++|..
T Consensus        90 ~~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           90 AVHKTLHMQTSSPTA  104 (106)
T ss_dssp             HHHHHHTTSCCCCCC
T ss_pred             HHHHHHhCCCCCCcC
Confidence            999999999999875

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.92  E-value=3.3e-25  Score=120.08  Aligned_cols=95  Identities=15%  Similarity=0.246  Sum_probs=82.1

Q ss_pred             CccCCccccccccCHHHHHHHHhh-hccccccCCCCc--------eeCCCCCCCCCCcchHHHHhhhhcCCCCccCCC--
Q psy14694          1 ILKCTHCKVDLNLDTEIILQHYKL-CSEGARQSSRKK--------YDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFV--   69 (102)
Q Consensus         1 ~~~c~~c~~~f~~~~~~l~~h~~~-~~~~~~~~~~~~--------~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~--   69 (102)
                      +|.|..|++.|. ....|..|++. |.      ++.+        +.|..|++.|.....|..|+++|.++++|.|..  
T Consensus        25 ~~~C~~C~~~f~-~~~~L~~H~~~~H~------~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~   97 (155)
T 2rpc_A           25 SRPKKSCDRTFS-TMHELVTHVTMEHV------GGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPG   97 (155)
T ss_dssp             SSSCCCCCCCBS-SHHHHHHHHHTTTS------CCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTT
T ss_pred             ccccccCCcccC-CHHHHHHHHHhhcC------CCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCC
Confidence            477888999998 88899999887 54      3332        789999999999999999999999999999987  


Q ss_pred             CCCccCCchhhhhhhhhcCCCCcccccc--ccccC
Q psy14694         70 CPYRSNQRANLMSHPLVQISDEQLRFKK--IRIAV  102 (102)
Q Consensus        70 c~~~f~~~~~l~~h~~~~~~~~~~~C~~--c~~~~  102 (102)
                      |++.|.....|..|+++|+++++|.|+.  |+++|
T Consensus        98 C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f  132 (155)
T 2rpc_A           98 CGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRF  132 (155)
T ss_dssp             TCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCB
T ss_pred             CCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCcc
Confidence            9999999999999999999999999986  99887

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.91  E-value=2.9e-26  Score=121.65  Aligned_cols=73  Identities=16%  Similarity=0.281  Sum_probs=70.3

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccccccC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKIRIAV  102 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c~~~~  102 (102)
                      ++.|+++|.|.+|++.|.....|..|+++|++++||.|..|++.|.....|..|+++|+|++||.|+.||++|
T Consensus        16 ~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F   88 (133)
T 2lt7_A           16 IVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSF   88 (133)
T ss_dssp             EETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEE
T ss_pred             ecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCc
Confidence            3459999999999999999999999999999999999999999999999999999999999999999999987

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.91  E-value=1.9e-24  Score=117.05  Aligned_cols=88  Identities=16%  Similarity=0.334  Sum_probs=64.3

Q ss_pred             ccccccCHHHHHHHHhhhccccccCCCCceeCCC--CCCCCCCcchHHHHhhhhcCCCCccCCC--CCCccCCchhhhhh
Q psy14694          8 KVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFM--CPYRTPYSGTMRRHIRAHIGDRPYKCFV--CPYRSNQRANLMSH   83 (102)
Q Consensus         8 ~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~--c~~~~~~~~~l~~h~~~h~~~~~~~c~~--c~~~f~~~~~l~~h   83 (102)
                      ++.|. ....|..|++.|.      ++++|.|..  |++.|.....|..|+++|.++++|.|..  |++.|.....|..|
T Consensus        46 ~~~f~-~~~~l~~H~~~h~------~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H  118 (155)
T 2gli_A           46 LRPFK-AQYMLVVHMRRHT------GEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKH  118 (155)
T ss_dssp             TCCCS-SHHHHHHHTHHHH------CCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHH
T ss_pred             hhhhh-hHHHHHHHHHhcC------CCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHH
Confidence            35565 5555666665555      677777764  7777777777778877777777788876  88888777778888


Q ss_pred             h-hhcCCCCcccccc--ccccC
Q psy14694         84 P-LVQISDEQLRFKK--IRIAV  102 (102)
Q Consensus        84 ~-~~~~~~~~~~C~~--c~~~~  102 (102)
                      + ++|+++++|.|+.  |+++|
T Consensus       119 ~~~~H~~~~~~~C~~~~C~~~f  140 (155)
T 2gli_A          119 QNRTHSNEKPYVCKLPGCTKRY  140 (155)
T ss_dssp             HHHTTCSCCCEECCSTTTCCEE
T ss_pred             HHHhcCCCCCeeCCCCCCcccc
Confidence            6 6777777888876  77765

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.91  E-value=1.2e-24  Score=106.54  Aligned_cols=82  Identities=26%  Similarity=0.533  Sum_probs=78.5

Q ss_pred             CccCCccccccccCHHHHHHHHhhhccccccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhh
Q psy14694          1 ILKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANL   80 (102)
Q Consensus         1 ~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l   80 (102)
                      ||.|..|++.|. ....|..|++.|.      +++++.|..|++.|.....|..|++.|.++++|.|..|++.|.....|
T Consensus         1 ~~~C~~C~~~f~-~~~~l~~H~~~h~------~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   73 (82)
T 2kmk_A            1 SFDCKICGKSFK-RSSTLSTHLLIHS------DTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNL   73 (82)
T ss_dssp             CEECSSSCCEES-SHHHHHHHHHHHH------TCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHH
T ss_pred             CccCCCCccccc-CchhHHHHHHHcC------CCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHH
Confidence            799999999999 9999999999988      999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhcCC
Q psy14694         81 MSHPLVQIS   89 (102)
Q Consensus        81 ~~h~~~~~~   89 (102)
                      ..|+++|+|
T Consensus        74 ~~H~~~H~g   82 (82)
T 2kmk_A           74 ITHSRKHTG   82 (82)
T ss_dssp             HHHHHHHC-
T ss_pred             HHHHHhhCC
Confidence            999999875

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.91  E-value=2e-24  Score=120.37  Aligned_cols=95  Identities=18%  Similarity=0.323  Sum_probs=57.6

Q ss_pred             CccC--CccccccccCHHHHHHHHhhhccccccCCCCceeCC--CCCCCCCCcchHHHHh-hhh-cCCCCccC--CCCCC
Q psy14694          1 ILKC--THCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCF--MCPYRTPYSGTMRRHI-RAH-IGDRPYKC--FVCPY   72 (102)
Q Consensus         1 ~~~c--~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~--~c~~~~~~~~~l~~h~-~~h-~~~~~~~c--~~c~~   72 (102)
                      ||.|  +.|++.|. ....|..|+++|.      ++++|.|.  .|++.|.....|..|+ +.| .++++|.|  ..|++
T Consensus        42 ~~~C~~~~C~~~f~-~~~~l~~H~~~h~------~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k  114 (190)
T 1tf6_A           42 PFPCKEEGCEKGFT-SLHHLTRHSLTHT------GEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGK  114 (190)
T ss_dssp             SSCCSSTTCCCCCS-SHHHHHHHHTTTT------TCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCE
T ss_pred             CccCCCCCCChhhC-CHHHHHHHHHHcc------CCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCcc
Confidence            3555  45666665 5555555555554      55666666  5666666666666665 444 34556666  55666


Q ss_pred             ccCCchhhhhhhhhcCCCCcccccc--ccccC
Q psy14694         73 RSNQRANLMSHPLVQISDEQLRFKK--IRIAV  102 (102)
Q Consensus        73 ~f~~~~~l~~h~~~~~~~~~~~C~~--c~~~~  102 (102)
                      .|.....|..|+++|++++||.|+.  |+++|
T Consensus       115 ~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F  146 (190)
T 1tf6_A          115 AFKKHNQLKVHQFSHTQQLPYECPHEGCDKRF  146 (190)
T ss_dssp             ECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBC
T ss_pred             ccCCHHHHHHHHHHhCCCCCccCCCCCCCchh
Confidence            6666666666666666666666655  66665

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.91  E-value=3e-24  Score=108.05  Aligned_cols=86  Identities=28%  Similarity=0.607  Sum_probs=82.0

Q ss_pred             CccCCccccccccCHHHHHHHHhhhccccccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhh
Q psy14694          1 ILKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANL   80 (102)
Q Consensus         1 ~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l   80 (102)
                      ||.|..|++.|. ....|..|++.|.      ++++|.|..|++.|.....|..|+++|.++++|.|..|++.|.....|
T Consensus         8 ~~~C~~C~~~f~-~~~~l~~H~~~h~------~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   80 (96)
T 2dmd_A            8 PHKCEVCGKCFS-RKDKLKTHMRCHT------GVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQL   80 (96)
T ss_dssp             CCCBTTTTBCCC-CHHHHHHHGGGCC------CCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHH
T ss_pred             CeECCCCCCccC-CHHHHHHHHHhcC------CCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHH
Confidence            689999999998 9999999999887      899999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhcCCCCcc
Q psy14694         81 MSHPLVQISDEQL   93 (102)
Q Consensus        81 ~~h~~~~~~~~~~   93 (102)
                      ..|+++|+++++.
T Consensus        81 ~~H~~~h~~~~~p   93 (96)
T 2dmd_A           81 TVHLRSHTGDSGP   93 (96)
T ss_dssp             HHHHTTCCSCCCC
T ss_pred             HHHHHHhcCCCCC
Confidence            9999999998764

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.90  E-value=4.3e-24  Score=115.68  Aligned_cols=88  Identities=22%  Similarity=0.415  Sum_probs=84.7

Q ss_pred             ccCCccccccccCHHHHHHHHhhhccccccCCCCceeCCC--CCCCCCCcchHHHHhhhhcCCCCccCCC--CCCccCCc
Q psy14694          2 LKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFM--CPYRTPYSGTMRRHIRAHIGDRPYKCFV--CPYRSNQR   77 (102)
Q Consensus         2 ~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~--c~~~~~~~~~l~~h~~~h~~~~~~~c~~--c~~~f~~~   77 (102)
                      |.|..|++.|. ....|..|++.|.      ++++|.|..  |++.|.....|..|+++|.++++|.|..  |++.|...
T Consensus        63 ~~C~~C~~~f~-~~~~l~~H~~~h~------~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~  135 (155)
T 2rpc_A           63 EECPREGKSFK-AKYKLVNHIRVHT------GEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANS  135 (155)
T ss_dssp             TTCTTSSCCCS-SHHHHHHHTHHHH------CCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSH
T ss_pred             cCCCCcccccC-CHHHHHHHHHhcC------CCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCH
Confidence            78999999998 9999999999998      999999998  9999999999999999999999999997  99999999


Q ss_pred             hhhhhhhhhcCCCCccccc
Q psy14694         78 ANLMSHPLVQISDEQLRFK   96 (102)
Q Consensus        78 ~~l~~h~~~~~~~~~~~C~   96 (102)
                      ..|..|+++|++++||.|.
T Consensus       136 ~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          136 SDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             HHHHHSSTTTTSCCCSCSC
T ss_pred             HHHHHHHHHhcCCCCCCCC
Confidence            9999999999999999986

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.90  E-value=3.4e-24  Score=106.64  Aligned_cols=85  Identities=19%  Similarity=0.547  Sum_probs=78.9

Q ss_pred             CccCC--ccccccccCHHHHHHHHhhhccccccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCch
Q psy14694          1 ILKCT--HCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRA   78 (102)
Q Consensus         1 ~~~c~--~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~   78 (102)
                      ||.|+  .|++.|. ....|..|++.|.      ++++|.|..|++.|.....|..|+++|.++++|.|..|++.|....
T Consensus         4 ~~~C~~~~C~~~f~-~~~~l~~H~~~h~------~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~   76 (90)
T 1a1h_A            4 PYACPVESCDRRFS-QSGSLTRHIRIHT------GQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSD   76 (90)
T ss_dssp             CEECCSSSCCCEES-SHHHHHHHHHHHH------CCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHH
T ss_pred             ceECCCCCCCCccC-CHHHHHHHHHHhC------CCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHH
Confidence            68897  6999999 9999999999988      9999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhcCCCCc
Q psy14694         79 NLMSHPLVQISDEQ   92 (102)
Q Consensus        79 ~l~~h~~~~~~~~~   92 (102)
                      .|..|+++|++++.
T Consensus        77 ~l~~H~~~H~~~k~   90 (90)
T 1a1h_A           77 ERKRHTKIHLRQKD   90 (90)
T ss_dssp             HHHHHHGGGGC---
T ss_pred             HHHHHHHHhcccCC
Confidence            99999999999863

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.90  E-value=5.2e-24  Score=115.28  Aligned_cols=98  Identities=18%  Similarity=0.305  Sum_probs=86.5

Q ss_pred             CccCCccccccccCHHHHHHHHhhhccccccCCCCceeCCC-----CCCCCCCcchHHHHhhhhcCCCCccCCC--CCCc
Q psy14694          1 ILKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFM-----CPYRTPYSGTMRRHIRAHIGDRPYKCFV--CPYR   73 (102)
Q Consensus         1 ~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~-----c~~~~~~~~~l~~h~~~h~~~~~~~c~~--c~~~   73 (102)
                      +|.|+.|++.|. +...|..|++..+   .+.++++|.|..     |++.|.....|..|++.|.++++|.|..  |++.
T Consensus         3 ~~~C~~C~~~f~-~~~~L~~H~~~~h---~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~   78 (155)
T 2gli_A            3 DCRWDGCSQEFD-SQEQLVHHINSEH---IHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKS   78 (155)
T ss_dssp             BCCBTTCCCBCS-CHHHHHHHHHHHT---SSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCC
T ss_pred             cCCcCCCccccC-CHHHHHHHHHhhc---cCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCc
Confidence            588999999999 9999999998321   122888888864     3489999999999999999999999985  9999


Q ss_pred             cCCchhhhhhhhhcCCCCcccccc--ccccC
Q psy14694         74 SNQRANLMSHPLVQISDEQLRFKK--IRIAV  102 (102)
Q Consensus        74 f~~~~~l~~h~~~~~~~~~~~C~~--c~~~~  102 (102)
                      |.....|..|+++|+++++|.|+.  |+++|
T Consensus        79 f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f  109 (155)
T 2gli_A           79 YSRLENLKTHLRSHTGEKPYMCEHEGCSKAF  109 (155)
T ss_dssp             CSSHHHHHHHHHHTTTCCCEECCSTTCCCEE
T ss_pred             ccCHHHHHHHHHHcCCCCCeeCCCCCCCCcc
Confidence            999999999999999999999998  99986

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.90  E-value=3e-24  Score=99.35  Aligned_cols=59  Identities=25%  Similarity=0.435  Sum_probs=56.1

Q ss_pred             CCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCC
Q psy14694         33 SRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDE   91 (102)
Q Consensus        33 ~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~   91 (102)
                      .|+||.|.+|++.|.....|..|+++|+|++||.|.+|+++|...+.|..|+++|+|++
T Consensus         1 SEKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            1 SERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            37899999999999999999999999999999999999999999999999999999986

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.89  E-value=2.6e-23  Score=115.92  Aligned_cols=95  Identities=20%  Similarity=0.298  Sum_probs=89.2

Q ss_pred             CccC--CccccccccCHHHHHHHHhhhccccccCCCCceeC--CCCCCCCCCcchHHHHhhhhcCCCCccCC--CCCCcc
Q psy14694          1 ILKC--THCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDC--FMCPYRTPYSGTMRRHIRAHIGDRPYKCF--VCPYRS   74 (102)
Q Consensus         1 ~~~c--~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c--~~c~~~~~~~~~l~~h~~~h~~~~~~~c~--~c~~~f   74 (102)
                      +|.|  +.|++.|. ....|..|++.|.      ++++|.|  ..|++.|.....|..|+++|.++++|.|.  .|++.|
T Consensus        12 ~~~C~~~~C~~~f~-~~~~L~~H~~~h~------~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f   84 (190)
T 1tf6_A           12 RYICSFADCGAAYN-KNWKLQAHLCKHT------GEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRF   84 (190)
T ss_dssp             CCBCSSTTTCCBCS-SHHHHHHHHHHHH------CCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEE
T ss_pred             ceeCCCCCCcchhC-CHHHHHHHHHhcC------CCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCcc
Confidence            5888  68999999 9999999999998      9999999  88999999999999999999999999999  899999


Q ss_pred             CCchhhhhhh-hhc-CCCCcccc--ccccccC
Q psy14694         75 NQRANLMSHP-LVQ-ISDEQLRF--KKIRIAV  102 (102)
Q Consensus        75 ~~~~~l~~h~-~~~-~~~~~~~C--~~c~~~~  102 (102)
                      .....|..|+ +.| .++++|.|  +.|+++|
T Consensus        85 ~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f  116 (190)
T 1tf6_A           85 TTKANMKKHFNRFHNIKICVYVCHFENCGKAF  116 (190)
T ss_dssp             SCHHHHHHHHHTTSSTTTSCCEECSSSSCEEC
T ss_pred             CCHHHHHHHHHHhcCCCcceeeCCCCCCcccc
Confidence            9999999999 667 57899999  9999987

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.88  E-value=3.1e-23  Score=106.29  Aligned_cols=87  Identities=16%  Similarity=0.291  Sum_probs=81.1

Q ss_pred             CccCCccccccccCHHHHHHHHhhhccccccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhh
Q psy14694          1 ILKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANL   80 (102)
Q Consensus         1 ~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l   80 (102)
                      ||.|..|++.|. ....|..|+++|.        ++|.|..|++.|.....|..|++ |.+++||.|..|++.|.....|
T Consensus        16 ~~~C~~C~~~f~-~~~~l~~H~~~H~--------~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L   85 (107)
T 1wjp_A           16 VYQCRLCNAKLS-SLLEQGSHERLCR--------NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSI   85 (107)
T ss_dssp             CCBCTTTCCBCS-SHHHHHHHHHHHH--------HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHH
T ss_pred             CeECCCCCCccC-CHHHHHHHHHHCC--------CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHH
Confidence            689999999999 9999999999874        57999999999999999999996 9999999999999999999999


Q ss_pred             hhhhh-hcCCCCcccccc
Q psy14694         81 MSHPL-VQISDEQLRFKK   97 (102)
Q Consensus        81 ~~h~~-~~~~~~~~~C~~   97 (102)
                      ..|++ +|+++++|.+..
T Consensus        86 ~~H~~~~H~~~~~~~~~~  103 (107)
T 1wjp_A           86 WRHQVEVHNQNNMAPTSG  103 (107)
T ss_dssp             HHHHHHTSCCCCCCCCCC
T ss_pred             HHHHHHHcCCCCCCCCCC
Confidence            99997 899999998753

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.88  E-value=1.4e-22  Score=101.72  Aligned_cols=84  Identities=26%  Similarity=0.434  Sum_probs=78.0

Q ss_pred             CccCCccccccccCHHHHHHHHhhhccccccCCCCceeCCCCCCCCCCcchHHHHhhhhcCC--CCccCCCCCCccCCch
Q psy14694          1 ILKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGD--RPYKCFVCPYRSNQRA   78 (102)
Q Consensus         1 ~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~--~~~~c~~c~~~f~~~~   78 (102)
                      +|.|..|++.|. ....|..|++.|.      ++++|.|..|++.|.....|..|++.|.++  ++|.|..|++.|....
T Consensus         7 ~~~C~~C~~~f~-~~~~l~~H~~~h~------~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~   79 (95)
T 2yt9_A            7 GVACEICGKIFR-DVYHLNRHKLSHS------GEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPD   79 (95)
T ss_dssp             CEECSSSCCEES-SSHHHHHHHHHSC------SSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHH
T ss_pred             CeECCCCCCccC-ChHHHHHHHHhcC------CCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHH
Confidence            689999999998 8999999999987      899999999999999999999999999987  8999999999999999


Q ss_pred             hhhhhhh-hcCCCC
Q psy14694         79 NLMSHPL-VQISDE   91 (102)
Q Consensus        79 ~l~~h~~-~~~~~~   91 (102)
                      .|..|++ +|.++.
T Consensus        80 ~L~~H~~~~H~~~~   93 (95)
T 2yt9_A           80 HLNGHIKQVHSGPS   93 (95)
T ss_dssp             HHHHHHHHTSCCCS
T ss_pred             HHHHHHHHhcCCCC
Confidence            9999986 687763

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.88  E-value=1e-22  Score=106.59  Aligned_cols=87  Identities=28%  Similarity=0.550  Sum_probs=77.0

Q ss_pred             CccCCccccccccCHHHHHHHHhhhccccccCCCCceeCCC--CCCCCCCcchHHHHhhhhcCCCCccCC--CCCCccCC
Q psy14694          1 ILKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFM--CPYRTPYSGTMRRHIRAHIGDRPYKCF--VCPYRSNQ   76 (102)
Q Consensus         1 ~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~--c~~~~~~~~~l~~h~~~h~~~~~~~c~--~c~~~f~~   76 (102)
                      +|.|..|++.|. ....|..|++.|.      ++++|.|..  |++.|.....|..|+++|.++++|.|.  .|++.|..
T Consensus        34 ~~~C~~C~~~f~-~~~~l~~H~~~h~------~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~  106 (124)
T 1ubd_C           34 VHVCAECGKAFV-ESSKLKRHQLVHT------GEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQ  106 (124)
T ss_dssp             CEECTTTCCEES-SHHHHHHHGGGTS------CCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSS
T ss_pred             CeECCCCCchhC-CHHHHHHHHHHcC------CCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCC
Confidence            589999999999 9999999999987      999999975  999999999999999999999999996  59999999


Q ss_pred             chhhhhhhhhcCCCCccc
Q psy14694         77 RANLMSHPLVQISDEQLR   94 (102)
Q Consensus        77 ~~~l~~h~~~~~~~~~~~   94 (102)
                      ...|..|+++|+++++++
T Consensus       107 ~~~L~~H~~~H~~~k~~q  124 (124)
T 1ubd_C          107 STNLKSHILTHAKAKNNQ  124 (124)
T ss_dssp             TTTTHHHHHHHC------
T ss_pred             HHHHHHHHHHHcccccCC
Confidence            999999999999998863

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.87  E-value=7.4e-23  Score=99.61  Aligned_cols=71  Identities=15%  Similarity=0.229  Sum_probs=67.4

Q ss_pred             CCCCceeCCC--CCCCCCCcchHHHHhh-hhcCCCCccCCC--CCCccCCchhhhhhhhhcCCCCccccccccccC
Q psy14694         32 SSRKKYDCFM--CPYRTPYSGTMRRHIR-AHIGDRPYKCFV--CPYRSNQRANLMSHPLVQISDEQLRFKKIRIAV  102 (102)
Q Consensus        32 ~~~~~~~c~~--c~~~~~~~~~l~~h~~-~h~~~~~~~c~~--c~~~f~~~~~l~~h~~~~~~~~~~~C~~c~~~~  102 (102)
                      +++++|.|..  |++.|.....|..|++ .|.++++|.|..  |++.|.....|..|+++|++++||.|+.|+++|
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCC
Confidence            3788899986  9999999999999999 799999999999  999999999999999999999999999999998

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.86  E-value=4.3e-22  Score=103.11  Aligned_cols=90  Identities=12%  Similarity=0.150  Sum_probs=72.9

Q ss_pred             CccCCccccccccCHHHHHHHHhh--hccccccCCCCce-eCCCCCCCC--CCcchHHHHhhhhcCCCCccCCCCCCccC
Q psy14694          1 ILKCTHCKVDLNLDTEIILQHYKL--CSEGARQSSRKKY-DCFMCPYRT--PYSGTMRRHIRAHIGDRPYKCFVCPYRSN   75 (102)
Q Consensus         1 ~~~c~~c~~~f~~~~~~l~~h~~~--~~~~~~~~~~~~~-~c~~c~~~~--~~~~~l~~h~~~h~~~~~~~c~~c~~~f~   75 (102)
                      ||.|..|++.|. ....|..|++.  +.      +++++ .|..|++.|  .....|..|+++|.+++||.|..|++.|.
T Consensus        19 ~~~C~~C~k~f~-~~~~L~~H~~~~~h~------~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~   91 (115)
T 2dmi_A           19 KFRCKDCSAAYD-TLVELTVHMNETGHY------RDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFE   91 (115)
T ss_dssp             SEEBSSSSCEES-SHHHHHHHHHHTCCC------BCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCCBCS
T ss_pred             CEECCccCchhc-CHHHHHHHHHHhCcc------ccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCCCCCccC
Confidence            678888999998 88888888887  43      45544 488888888  78888888888888889999999999999


Q ss_pred             CchhhhhhhhhcCCCCcccccc
Q psy14694         76 QRANLMSHPLVQISDEQLRFKK   97 (102)
Q Consensus        76 ~~~~l~~h~~~~~~~~~~~C~~   97 (102)
                      ....|..|+++|+.......+.
T Consensus        92 ~~~~L~~H~~~hh~~~~~~~~~  113 (115)
T 2dmi_A           92 SLQDLSVHMIKTKHYQKVSGPS  113 (115)
T ss_dssp             SHHHHHHHHHHTTTTTCSCCCC
T ss_pred             CHHHHHHHHHHhCCcccCCCCC
Confidence            9999999988877776665554

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.85  E-value=7.1e-22  Score=99.28  Aligned_cols=71  Identities=23%  Similarity=0.475  Sum_probs=68.6

Q ss_pred             CCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccccccC
Q psy14694         32 SSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKIRIAV  102 (102)
Q Consensus        32 ~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c~~~~  102 (102)
                      .++++|.|..|++.|.....|..|++.|.++++|.|..|++.|.....|..|+++|+++++|.|+.|+++|
T Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f   74 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYAS   74 (96)
T ss_dssp             CCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEE
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCcc
Confidence            37899999999999999999999999999999999999999999999999999999999999999999986

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.85  E-value=1.2e-21  Score=100.74  Aligned_cols=81  Identities=20%  Similarity=0.447  Sum_probs=71.7

Q ss_pred             CccCCccccccccCHHHHHHHHhhhccccccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhh
Q psy14694          1 ILKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANL   80 (102)
Q Consensus         1 ~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l   80 (102)
                      ||.| .|++.|. ....|..|++.|.      ++++|.|..|++.|.....|..|+++|.++++|.|..|++.|.....|
T Consensus        10 ~~~C-~C~~~f~-~~~~l~~H~~~h~------~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   81 (110)
T 2csh_A           10 LYPC-QCGKSFT-HKSQRDRHMSMHL------GLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF   81 (110)
T ss_dssp             CEEC-TTSCEES-SHHHHHHHHHHHS------CCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHH
T ss_pred             CEec-cCCCccC-CHHHHHHHHHHcC------CCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHH
Confidence            5788 8999998 8888999998887      888899999999999999999999999999999999999999999999


Q ss_pred             hhhhhhcCC
Q psy14694         81 MSHPLVQIS   89 (102)
Q Consensus        81 ~~h~~~~~~   89 (102)
                      ..|++.|+.
T Consensus        82 ~~H~~~~~~   90 (110)
T 2csh_A           82 HRHVTSCTK   90 (110)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHccc
Confidence            999888653

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.85  E-value=2.4e-21  Score=98.92  Aligned_cols=71  Identities=20%  Similarity=0.445  Sum_probs=68.4

Q ss_pred             CCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccccccC
Q psy14694         32 SSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKIRIAV  102 (102)
Q Consensus        32 ~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c~~~~  102 (102)
                      ..+++|.|..|++.|.....|..|++.|.++++|.|..|++.|.....|..|+++|+++++|.|+.|++.|
T Consensus        13 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f   83 (106)
T 2ee8_A           13 KTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGF   83 (106)
T ss_dssp             CCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCC
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcc
Confidence            36788999999999999999999999999999999999999999999999999999999999999999987

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.85  E-value=5.6e-22  Score=101.93  Aligned_cols=72  Identities=24%  Similarity=0.408  Sum_probs=68.9

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccccccC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKIRIAV  102 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c~~~~  102 (102)
                      .+.++++|.| .|++.|.....|..|++.|.++++|.|..|++.|.....|..|+++|+++++|.|+.|+++|
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f   75 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRF   75 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEE
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchh
Confidence            3559999999 99999999999999999999999999999999999999999999999999999999999986

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.85  E-value=1.4e-21  Score=96.90  Aligned_cols=81  Identities=23%  Similarity=0.501  Sum_probs=75.7

Q ss_pred             CccCCc--cccccccCHHHHHHHHhhhccccccCCCCceeCC--CCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCC
Q psy14694          1 ILKCTH--CKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCF--MCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQ   76 (102)
Q Consensus         1 ~~~c~~--c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~--~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~   76 (102)
                      +|.|..  |++.|. ....|..|++.|.      ++++|.|.  .|++.|.....|..|++.|.++++|.|..|++.|..
T Consensus         5 ~~~C~~~~C~~~f~-~~~~l~~H~~~h~------~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~   77 (89)
T 2wbs_A            5 THTCDYAGCGKTYT-KSSHLKAHLRTHT------GEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSR   77 (89)
T ss_dssp             CEECCSTTTCCEES-SHHHHHHHHTTSC------SSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESS
T ss_pred             CeeCCCCCCCCcCC-CHHHHHHHHHhcC------CCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCC
Confidence            578988  999998 9999999999887      89999997  699999999999999999999999999999999999


Q ss_pred             chhhhhhhhhcC
Q psy14694         77 RANLMSHPLVQI   88 (102)
Q Consensus        77 ~~~l~~h~~~~~   88 (102)
                      ...|..|+++|.
T Consensus        78 ~~~l~~H~~~H~   89 (89)
T 2wbs_A           78 SDHLALHMKRHF   89 (89)
T ss_dssp             HHHHHHHGGGGC
T ss_pred             HHHHHHHHHhhC
Confidence            999999999874

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.85  E-value=3.2e-21  Score=97.48  Aligned_cols=82  Identities=26%  Similarity=0.511  Sum_probs=73.4

Q ss_pred             CccCCc--cccccccCHHHHHHHHhhhccccccCCCCceeCC--CCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCC
Q psy14694          1 ILKCTH--CKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCF--MCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQ   76 (102)
Q Consensus         1 ~~~c~~--c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~--~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~   76 (102)
                      +|.|..  |++.|. ....|..|++.|.      ++++|.|.  .|++.|.....|..|+++|.++++|.|..|++.|..
T Consensus        15 ~~~C~~~~C~~~f~-~~~~l~~H~~~h~------~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~   87 (100)
T 2ebt_A           15 IHYCDYPGCTKVYT-KSSHLKAHLRTHT------GEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSR   87 (100)
T ss_dssp             CEECCSSSCCCEES-CHHHHHHHHHHHS------CCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSS
T ss_pred             ceEcCCCCCCCccc-CHHHHHHHHHHhC------CCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCC
Confidence            467875  999998 8899999999887      88999996  699999999999999999999999999999999999


Q ss_pred             chhhhhhhhhcCC
Q psy14694         77 RANLMSHPLVQIS   89 (102)
Q Consensus        77 ~~~l~~h~~~~~~   89 (102)
                      ...|..|+++|++
T Consensus        88 ~~~l~~H~~~H~~  100 (100)
T 2ebt_A           88 SDHLALHMKRHQN  100 (100)
T ss_dssp             HHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHhCC
Confidence            9999999998864

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.85  E-value=3.8e-23  Score=107.10  Aligned_cols=79  Identities=13%  Similarity=0.064  Sum_probs=70.6

Q ss_pred             HHHHHhhhccccccCCCCceeCCCCCCCCCCcchHHHHhhh--hcCCCCc-cCCCCCCcc--CCchhhhhhhhhcCCCCc
Q psy14694         18 ILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRA--HIGDRPY-KCFVCPYRS--NQRANLMSHPLVQISDEQ   92 (102)
Q Consensus        18 l~~h~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~--h~~~~~~-~c~~c~~~f--~~~~~l~~h~~~~~~~~~   92 (102)
                      |..|+++|.      ++++|.|..|++.|.....|..|+++  |.+++++ .|..|++.|  .....|..|+++|++++|
T Consensus         7 l~~H~~~H~------~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~   80 (115)
T 2dmi_A            7 GKLYGSIFT------GASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKV   80 (115)
T ss_dssp             CCCCCCCCC------CCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSS
T ss_pred             hhhheeeeC------CCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcc
Confidence            445555555      99999999999999999999999998  7777765 499999998  899999999999999999


Q ss_pred             cccccccccC
Q psy14694         93 LRFKKIRIAV  102 (102)
Q Consensus        93 ~~C~~c~~~~  102 (102)
                      |.|+.|+++|
T Consensus        81 ~~C~~C~k~f   90 (115)
T 2dmi_A           81 LKCMYCGHSF   90 (115)
T ss_dssp             CBCSSSCCBC
T ss_pred             eECCCCCCcc
Confidence            9999999987

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.85  E-value=1.1e-21  Score=98.39  Aligned_cols=71  Identities=20%  Similarity=0.326  Sum_probs=68.3

Q ss_pred             CCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCC--CccccccccccC
Q psy14694         32 SSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISD--EQLRFKKIRIAV  102 (102)
Q Consensus        32 ~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~--~~~~C~~c~~~~  102 (102)
                      +++++|.|..|++.|.....|..|+++|.++++|.|..|++.|.....|..|+++|+++  ++|.|+.|+++|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f   75 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGF   75 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCB
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchh
Confidence            37899999999999999999999999999999999999999999999999999999997  999999999987

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.84  E-value=1.2e-21  Score=99.36  Aligned_cols=73  Identities=18%  Similarity=0.469  Sum_probs=66.3

Q ss_pred             ccccCCCCceeCCCCCCCCCCcchHHHHhh-hh---cCCCCccCCCCCCccCCchhhhhh-hhhcCCCCccccccccc
Q psy14694         28 GARQSSRKKYDCFMCPYRTPYSGTMRRHIR-AH---IGDRPYKCFVCPYRSNQRANLMSH-PLVQISDEQLRFKKIRI  100 (102)
Q Consensus        28 ~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~-~h---~~~~~~~c~~c~~~f~~~~~l~~h-~~~~~~~~~~~C~~c~~  100 (102)
                      .+.+.|+++|.|..|++.|.....|..|++ .|   .+++||.|..|++.|...+.|..| +++|+|++||.|..+..
T Consensus        10 ~~~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~~   87 (102)
T 2ghf_A           10 QQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVKR   87 (102)
T ss_dssp             TTCCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECCC
T ss_pred             cccCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcccC
Confidence            345669999999999999999999999997 58   668999999999999999999999 89999999999987653

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.84  E-value=4.5e-21  Score=100.19  Aligned_cols=87  Identities=24%  Similarity=0.455  Sum_probs=78.1

Q ss_pred             CccCCccccccccCHHHHHHHHhhhccccccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhh
Q psy14694          1 ILKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANL   80 (102)
Q Consensus         1 ~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l   80 (102)
                      ||.|+.|++.|. ....|..|+..+.   .+.++++|.|..|++.|.....|..|+++|.+++||.|..|++.|.....|
T Consensus        35 ~~~C~~C~~~f~-~~~~l~~H~~~~~---~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  110 (124)
T 2dlq_A           35 PFECPKCGKCYF-RKENLLEHEARNC---MNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDL  110 (124)
T ss_dssp             SCBCTTTCCBCS-SHHHHHHHHHHCC---CCSCCCCEECSSSCCEESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHH
T ss_pred             CeECCCCCchhc-CHHHHHHHHhhhh---cCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHH
Confidence            689999999999 9999999998642   123889999999999999999999999999999999999999999999999


Q ss_pred             hhhhh-hcCCCC
Q psy14694         81 MSHPL-VQISDE   91 (102)
Q Consensus        81 ~~h~~-~~~~~~   91 (102)
                      ..|++ +|.++.
T Consensus       111 ~~H~~~~H~~~~  122 (124)
T 2dlq_A          111 QSHMIKLHSGPS  122 (124)
T ss_dssp             HHHHHHTSSCSS
T ss_pred             HHHHHHHCCCCC
Confidence            99987 577764

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.84  E-value=2.8e-21  Score=100.38  Aligned_cols=80  Identities=20%  Similarity=0.551  Sum_probs=76.2

Q ss_pred             CccCC--ccccccccCHHHHHHHHhhhccccccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccC--CCCCCccCC
Q psy14694          1 ILKCT--HCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKC--FVCPYRSNQ   76 (102)
Q Consensus         1 ~~~c~--~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c--~~c~~~f~~   76 (102)
                      ||.|+  .|++.|. ....|..|++.|.      ++++|.|..|++.|.....|..|+++|.++++|.|  ..|++.|..
T Consensus        36 ~~~C~~~~C~~~f~-~~~~l~~H~~~h~------~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~  108 (119)
T 2jp9_A           36 PYQCDFKDCERRFS-RSDQLKRHQRRHT------GVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFAR  108 (119)
T ss_dssp             CEECCSTTCCCEES-SHHHHHHHHHHHH------CCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESS
T ss_pred             CccCCCCCCcCccC-CHHHHHHHHHHcC------CCCCccCCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCC
Confidence            57898  7999999 9999999999998      99999999999999999999999999999999999  899999999


Q ss_pred             chhhhhhhhhc
Q psy14694         77 RANLMSHPLVQ   87 (102)
Q Consensus        77 ~~~l~~h~~~~   87 (102)
                      ...|..|+++|
T Consensus       109 ~~~L~~H~~~H  119 (119)
T 2jp9_A          109 SDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHHTC
T ss_pred             HHHHHHHHhcC
Confidence            99999999876

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.84  E-value=3.9e-21  Score=93.14  Aligned_cols=65  Identities=31%  Similarity=0.539  Sum_probs=62.5

Q ss_pred             cCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCcccc
Q psy14694         31 QSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRF   95 (102)
Q Consensus        31 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C   95 (102)
                      +.++++|.|..|++.|.....|..|+++|.++++|.|..|++.|.....|..|+++|++++||.|
T Consensus        13 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           13 QRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            44789999999999999999999999999999999999999999999999999999999999988

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.84  E-value=7.6e-22  Score=98.07  Aligned_cols=70  Identities=24%  Similarity=0.528  Sum_probs=65.7

Q ss_pred             CCCceeCC--CCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccccccC
Q psy14694         33 SRKKYDCF--MCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKIRIAV  102 (102)
Q Consensus        33 ~~~~~~c~--~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c~~~~  102 (102)
                      ++++|.|.  .|++.|.....|..|+++|.++++|.|..|++.|.....|..|+++|+++++|.|+.|+++|
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f   72 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKF   72 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEE
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchh
Confidence            46789998  69999999999999999999999999999999999999999999999999999999999986

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.83  E-value=1e-21  Score=96.84  Aligned_cols=77  Identities=12%  Similarity=0.166  Sum_probs=69.8

Q ss_pred             HHHhhhccccccCCCCceeCCCCCCCCCCcchHHHHhhhhcCC----CCccCCCCCCccCCchhhhhhhhhcCCCCcccc
Q psy14694         20 QHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGD----RPYKCFVCPYRSNQRANLMSHPLVQISDEQLRF   95 (102)
Q Consensus        20 ~h~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~----~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C   95 (102)
                      .|+++|.      ++++|.|..|++.|.....|..|++.+.++    ++|.|..|++.|.....|..|+++|++++++.|
T Consensus         5 ~H~~~H~------~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~   78 (86)
T 1x6h_A            5 SSGRTHT------GEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEG   78 (86)
T ss_dssp             CCSTTCC------CCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCC
T ss_pred             cccceec------CCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCccc
Confidence            4555555      999999999999999999999999876654    789999999999999999999999999999999


Q ss_pred             ccccccC
Q psy14694         96 KKIRIAV  102 (102)
Q Consensus        96 ~~c~~~~  102 (102)
                      ..|+.+|
T Consensus        79 ~~~~~~~   85 (86)
T 1x6h_A           79 ENSGPSS   85 (86)
T ss_dssp             CCCCCCC
T ss_pred             CCCCCCC
Confidence            9999875

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.83  E-value=1.1e-21  Score=95.86  Aligned_cols=67  Identities=24%  Similarity=0.516  Sum_probs=64.8

Q ss_pred             ceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccccccC
Q psy14694         36 KYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKIRIAV  102 (102)
Q Consensus        36 ~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c~~~~  102 (102)
                      +|.|..|++.|.....|..|++.|.++++|.|..|++.|.....|..|+++|+++++|.|+.|+++|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f   67 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAF   67 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEE
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhh
Confidence            5889999999999999999999999999999999999999999999999999999999999999986

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.81  E-value=1.4e-20  Score=96.27  Aligned_cols=70  Identities=14%  Similarity=0.165  Sum_probs=65.7

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccccccC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKIRIAV  102 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c~~~~  102 (102)
                      .+.++++|.|..|++.|.....|..|+++|  +++|.|..|++.|.....|..|++ |+++++|.|+.|+++|
T Consensus        10 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f   79 (107)
T 1wjp_A           10 PVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTF   79 (107)
T ss_dssp             CCCCCCCCBCTTTCCBCSSHHHHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEEC
T ss_pred             ccCCCcCeECCCCCCccCCHHHHHHHHHHC--CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchh
Confidence            455899999999999999999999999998  479999999999999999999996 9999999999999987

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.81  E-value=3.5e-20  Score=91.02  Aligned_cols=78  Identities=19%  Similarity=0.444  Sum_probs=73.9

Q ss_pred             CccC--CccccccccCHHHHHHHHhhhccccccCCCCceeCCC--CCCCCCCcchHHHHhhhhcCCCCccCCC---CCCc
Q psy14694          1 ILKC--THCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFM--CPYRTPYSGTMRRHIRAHIGDRPYKCFV---CPYR   73 (102)
Q Consensus         1 ~~~c--~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~--c~~~~~~~~~l~~h~~~h~~~~~~~c~~---c~~~   73 (102)
                      ||.|  +.|++.|. ....|..|+++|.      ++++|.|..  |++.|.....|..|+++|.+   |.|..   |++.
T Consensus         1 p~~C~~~~C~~~f~-~~~~l~~H~~~h~------~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~   70 (85)
T 2j7j_A            1 MYVCHFENCGKAFK-KHNQLKVHQFSHT------QQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFV   70 (85)
T ss_dssp             CEECCSTTCCCEES-SHHHHHHHHHHHH------TTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCE
T ss_pred             CccCCCCCCCcccC-CHHHHHHHHHHhC------CCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCc
Confidence            7899  99999999 9999999999988      999999988  99999999999999999998   99999   9999


Q ss_pred             cCCchhhhhhhhhcC
Q psy14694         74 SNQRANLMSHPLVQI   88 (102)
Q Consensus        74 f~~~~~l~~h~~~~~   88 (102)
                      |...+.|..|+++|+
T Consensus        71 f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           71 GKTWTLYLKHVAECH   85 (85)
T ss_dssp             ESSHHHHHHHHHHCC
T ss_pred             cCCHHHHHHHHHhcC
Confidence            999999999999874

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.81  E-value=3.2e-20  Score=89.24  Aligned_cols=63  Identities=30%  Similarity=0.652  Sum_probs=60.4

Q ss_pred             cCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCcc
Q psy14694         31 QSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQL   93 (102)
Q Consensus        31 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~   93 (102)
                      ..++++|.|..|++.|.....|..|+++|.++++|+|..|++.|.....|..|+++|++++||
T Consensus        12 ~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           12 THSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             cCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            348899999999999999999999999999999999999999999999999999999999987

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.81  E-value=3.1e-20  Score=85.77  Aligned_cols=56  Identities=16%  Similarity=0.300  Sum_probs=53.6

Q ss_pred             CccCCccccccccCHHHHHHHHhhhccccccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCC
Q psy14694          1 ILKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDR   63 (102)
Q Consensus         1 ~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~   63 (102)
                      ||.|..|++.|. ....|..|+++|+      ++++|.|.+|++.|...+.|..|+++|+|++
T Consensus         4 py~C~~C~k~F~-~~~~L~~H~~~Ht------~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            4 PFFCNFCGKTYR-DASGLSRHRRAHL------GYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CEECTTTCCEES-SHHHHHHHHHHHH------TCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CccCCCCCCEeC-CHHHHHHHHHHhC------CCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            899999999999 9999999999999      9999999999999999999999999999875

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.79  E-value=2.1e-19  Score=90.45  Aligned_cols=79  Identities=13%  Similarity=0.113  Sum_probs=69.5

Q ss_pred             cccccCHHHHHHHHhhhccccccCCCCceeCCCCCCCC-CCcchHHHHhhhhcCCCCccCCCCCCccCCchhhhhh-hhh
Q psy14694          9 VDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRT-PYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSH-PLV   86 (102)
Q Consensus         9 ~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~c~~~~-~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h-~~~   86 (102)
                      ..|. ....+..|++.+.      ++++|.|..|++.| .....|..|+++| +++||.|.+|++.|.....|..| +++
T Consensus        14 ~~~~-~~~~~~~~~~~~~------~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~   85 (96)
T 2ctd_A           14 PVYA-AGSLEEQWYLEIV------DKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMAN   85 (96)
T ss_dssp             CSSC-TTCHHHHHHHHHH------HTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHH
T ss_pred             CCCC-CchHHHHHHHHhc------CCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHh
Confidence            3455 5667778888887      89999999999999 9999999999999 99999999999999999999999 899


Q ss_pred             cCCCCcccc
Q psy14694         87 QISDEQLRF   95 (102)
Q Consensus        87 ~~~~~~~~C   95 (102)
                      |+++..+.+
T Consensus        86 H~~~p~~~~   94 (96)
T 2ctd_A           86 HNSLPSGPS   94 (96)
T ss_dssp             TCCCSSCSC
T ss_pred             cCCCCCCCC
Confidence            987655543

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.79  E-value=4.1e-20  Score=91.59  Aligned_cols=70  Identities=21%  Similarity=0.436  Sum_probs=65.6

Q ss_pred             CCCceeCCC--CCCCCCCcchHHHHhhhhcCCCCccCC--CCCCccCCchhhhhhhhhcCCCCccccccccccC
Q psy14694         33 SRKKYDCFM--CPYRTPYSGTMRRHIRAHIGDRPYKCF--VCPYRSNQRANLMSHPLVQISDEQLRFKKIRIAV  102 (102)
Q Consensus        33 ~~~~~~c~~--c~~~~~~~~~l~~h~~~h~~~~~~~c~--~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c~~~~  102 (102)
                      ....+.|..  |++.|.....|..|++.|.++++|.|.  .|++.|.....|..|+++|+++++|.|+.|+++|
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f   75 (89)
T 2wbs_A            2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAF   75 (89)
T ss_dssp             -CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEE
T ss_pred             CCCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCccc
Confidence            356789998  999999999999999999999999997  6999999999999999999999999999999986

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.79  E-value=2e-19  Score=90.78  Aligned_cols=70  Identities=23%  Similarity=0.450  Sum_probs=66.5

Q ss_pred             CCCceeCCC--CCCCCCCcchHHHHhhhhcCCCCccCC--CCCCccCCchhhhhhhhhcCCCCccccccccccC
Q psy14694         33 SRKKYDCFM--CPYRTPYSGTMRRHIRAHIGDRPYKCF--VCPYRSNQRANLMSHPLVQISDEQLRFKKIRIAV  102 (102)
Q Consensus        33 ~~~~~~c~~--c~~~~~~~~~l~~h~~~h~~~~~~~c~--~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c~~~~  102 (102)
                      .++++.|..  |++.|.....|..|++.|.++++|.|.  .|++.|.....|..|+++|+++++|.|+.|+++|
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f   85 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSF   85 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBC
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCcc
Confidence            567899986  999999999999999999999999996  6999999999999999999999999999999987

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.78  E-value=7.5e-21  Score=94.28  Aligned_cols=79  Identities=14%  Similarity=0.201  Sum_probs=64.9

Q ss_pred             CccCCccccccccCHHHHHHHHhhhccccccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhh
Q psy14694          1 ILKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANL   80 (102)
Q Consensus         1 ~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l   80 (102)
                      ||.|+.|++.|. ....|..|+++|.      ++++|.|..|++.|.....|..|++.|.+ .++.|..|++.|.....|
T Consensus         3 ~~~C~~C~k~f~-~~~~L~~H~~~H~------~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L   74 (88)
T 1llm_C            3 PFQCRICMRNFS-RSDHLTTHIRTHT------GEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHL   74 (88)
T ss_dssp             CEECTTTCCEES-CHHHHHHHHHHHH------CCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHH
T ss_pred             CCcCCCCCCccC-CHHHHHHHHHHcC------CCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhh
Confidence            678888888887 8888888888877      88888888888888888888888887764 678888888888888888


Q ss_pred             hhhhhhc
Q psy14694         81 MSHPLVQ   87 (102)
Q Consensus        81 ~~h~~~~   87 (102)
                      ..|++.+
T Consensus        75 ~~H~~~~   81 (88)
T 1llm_C           75 ENEVARL   81 (88)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            8887663

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.78  E-value=2.9e-20  Score=93.89  Aligned_cols=74  Identities=18%  Similarity=0.206  Sum_probs=67.6

Q ss_pred             HHHHHHhhhccccccCCCCceeCCCCCCCCC-CcchHHHHhhhhcC-CCCccCCCCCCccCCchhhhhhhhhcCCCCccc
Q psy14694         17 IILQHYKLCSEGARQSSRKKYDCFMCPYRTP-YSGTMRRHIRAHIG-DRPYKCFVCPYRSNQRANLMSHPLVQISDEQLR   94 (102)
Q Consensus        17 ~l~~h~~~~~~~~~~~~~~~~~c~~c~~~~~-~~~~l~~h~~~h~~-~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~   94 (102)
                      .+..|++.|.      ++++|.|..|++.|. ....|..|+++|.+ +++|.|..|++.|.....|..|+++|++++|..
T Consensus        11 ~~~~h~~~h~------~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~   84 (98)
T 2gqj_A           11 PEEQWQRAIH------ERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSD   84 (98)
T ss_dssp             SCSHHHHTTT------TTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSC
T ss_pred             cHHHHHHHhc------cCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCC
Confidence            3457788877      999999999999999 99999999999998 999999999999999999999999999999965


Q ss_pred             cc
Q psy14694         95 FK   96 (102)
Q Consensus        95 C~   96 (102)
                      -.
T Consensus        85 ~~   86 (98)
T 2gqj_A           85 AE   86 (98)
T ss_dssp             CC
T ss_pred             CC
Confidence            43

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.77  E-value=2.7e-19  Score=85.14  Aligned_cols=65  Identities=31%  Similarity=0.491  Sum_probs=61.0

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccc
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLR   94 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~   94 (102)
                      .+.++++|.|..|++.|.....|..|+++|.++++|.|..|++.|.....|..|+++|++++|..
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~p   67 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGP   67 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCCS
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCCC
Confidence            35589999999999999999999999999999999999999999999999999999999998753

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.77  E-value=8.3e-19  Score=85.12  Aligned_cols=67  Identities=19%  Similarity=0.410  Sum_probs=62.3

Q ss_pred             CccCCc--cccccccCHHHHHHHHh-hhccccccCCCCceeCCC--CCCCCCCcchHHHHhhhhcCCCCccCCCCCCcc
Q psy14694          1 ILKCTH--CKVDLNLDTEIILQHYK-LCSEGARQSSRKKYDCFM--CPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRS   74 (102)
Q Consensus         1 ~~~c~~--c~~~f~~~~~~l~~h~~-~~~~~~~~~~~~~~~c~~--c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f   74 (102)
                      ||.|..  |++.|. ....|..|++ .|.      ++++|.|..  |++.|.....|..|+++|++++||.|..|++.|
T Consensus         7 ~~~C~~~~C~~~f~-~~~~L~~H~~~~H~------~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A            7 GMPCDFPGCGRIFS-NRQYLNHHKKYQHI------HQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             SEECSSTTTCCEES-SHHHHHHHHHHGGG------SCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             CccCCCCCCcCccC-CHHHHHHHHHHHhC------CCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCC
Confidence            467775  999999 9999999998 687      899999999  999999999999999999999999999999987

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.76  E-value=5.6e-21  Score=94.73  Aligned_cols=68  Identities=22%  Similarity=0.436  Sum_probs=64.4

Q ss_pred             CCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccccccC
Q psy14694         34 RKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKIRIAV  102 (102)
Q Consensus        34 ~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c~~~~  102 (102)
                      +++|.|..|++.|.....|..|+++|.+++||.|..|++.|.....|..|+++|++ .+|.|+.|++.|
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f   68 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELL   68 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHH
Confidence            47899999999999999999999999999999999999999999999999999885 799999999865

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.76  E-value=4.1e-19  Score=84.95  Aligned_cols=64  Identities=30%  Similarity=0.591  Sum_probs=59.7

Q ss_pred             cccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCc
Q psy14694         29 ARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQ   92 (102)
Q Consensus        29 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~   92 (102)
                      .+|.++++|.|..|++.|.....|..|+++|.+++||.|..|++.|.....|..|+++|+++.+
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~   70 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPS   70 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSSS
T ss_pred             cccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCC
Confidence            3455999999999999999999999999999999999999999999999999999999998753

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.74  E-value=2.3e-18  Score=84.67  Aligned_cols=62  Identities=21%  Similarity=0.316  Sum_probs=56.6

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhhhhhh-hhcCCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHP-LVQISDE   91 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~-~~~~~~~   91 (102)
                      .++..+++.|++|++.|.....|..|+++|++++||.|..|++.|.....|..|+ ++|++|.
T Consensus        22 ~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           22 LSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             SCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            3447788999999999999999999999999999999999999999999999996 5688774

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.72  E-value=7.1e-18  Score=81.52  Aligned_cols=60  Identities=22%  Similarity=0.399  Sum_probs=57.4

Q ss_pred             CccCCccccccccCHHHHHHHHhhhccccccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccC
Q psy14694          1 ILKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKC   67 (102)
Q Consensus         1 ~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c   67 (102)
                      ||.|..|++.|. ....|..|+++|.      ++++|.|..|++.|.....|..|+++|++++||+|
T Consensus        18 ~~~C~~C~~~f~-~~~~l~~H~~~h~------~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           18 RYKCDECGKSFS-HSSDLSKHRRTHT------GEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             SSBCSSSCCBCS-CHHHHHHHHTTTC------CSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CEECCCCCcccC-CHHHHHHHHHHcC------CCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            689999999999 9999999999988      99999999999999999999999999999999987

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.72  E-value=6.9e-21  Score=91.18  Aligned_cols=68  Identities=16%  Similarity=0.099  Sum_probs=60.4

Q ss_pred             HHHHHhhhccccccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCcccccc
Q psy14694         18 ILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKK   97 (102)
Q Consensus        18 l~~h~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~   97 (102)
                      |..|+++|.      ++++|.|..|++.|.....|..       +++|.|..|++.|.....|..|+++|+++++|.|+.
T Consensus         6 l~~H~~~h~------~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~   72 (73)
T 2ctu_A            6 SGKRQKIHL------GDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSS   72 (73)
T ss_dssp             CCCCCCCCC------CCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCC
T ss_pred             HHHHHHHhC------CCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCC
Confidence            334555554      9999999999999999888875       789999999999999999999999999999999998


Q ss_pred             c
Q psy14694         98 I   98 (102)
Q Consensus        98 c   98 (102)
                      |
T Consensus        73 C   73 (73)
T 2ctu_A           73 G   73 (73)
T ss_dssp             C
T ss_pred             C
Confidence            7

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.72  E-value=3.4e-18  Score=78.13  Aligned_cols=57  Identities=26%  Similarity=0.511  Sum_probs=49.5

Q ss_pred             CCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCC
Q psy14694         33 SRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQIS   89 (102)
Q Consensus        33 ~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~   89 (102)
                      |+++|.|..|++.|.....|..|+++|.+++||.|..|++.|.....|..|+++|++
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            467899999999999999999999999999999999999999999999999998764

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.72  E-value=1e-17  Score=83.84  Aligned_cols=63  Identities=13%  Similarity=0.092  Sum_probs=58.3

Q ss_pred             CceeCCCCCCCCCCcchHHHHhhh-hcCCCC--------ccCCCCCCccCCchhhhhhhhhcCCCCcccccc
Q psy14694         35 KKYDCFMCPYRTPYSGTMRRHIRA-HIGDRP--------YKCFVCPYRSNQRANLMSHPLVQISDEQLRFKK   97 (102)
Q Consensus        35 ~~~~c~~c~~~~~~~~~l~~h~~~-h~~~~~--------~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~   97 (102)
                      ..+.|..|++.|.....|..|+++ |.++++        |.|..|++.|.....|..|+++|++++||.|+.
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   95 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSSG   95 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSCC
T ss_pred             CCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            446799999999999999999998 999887        999999999999999999999999999999973

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.71  E-value=9.4e-18  Score=76.64  Aligned_cols=56  Identities=30%  Similarity=0.609  Sum_probs=45.3

Q ss_pred             ceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCC
Q psy14694         36 KYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDE   91 (102)
Q Consensus        36 ~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~   91 (102)
                      +|.|..|++.|.....|..|+++|.+++||.|..|++.|.....|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            46778888888888888888888888888888888888888888888888887764

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.71  E-value=2.4e-18  Score=84.40  Aligned_cols=64  Identities=23%  Similarity=0.334  Sum_probs=60.8

Q ss_pred             ceeC--CCCCCCCCCcchHHHHhhhhcCCCCccCCC--CCCccCCchhhhhhhhhcCCCCcccccc---ccccC
Q psy14694         36 KYDC--FMCPYRTPYSGTMRRHIRAHIGDRPYKCFV--CPYRSNQRANLMSHPLVQISDEQLRFKK---IRIAV  102 (102)
Q Consensus        36 ~~~c--~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~--c~~~f~~~~~l~~h~~~~~~~~~~~C~~---c~~~~  102 (102)
                      +|.|  ..|++.|.....|..|+++|.++++|.|..  |++.|.....|..|+++|++   |.|+.   |++.|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f   71 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVG   71 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEE
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCcc
Confidence            5789  899999999999999999999999999988  99999999999999999998   99999   99876

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.70  E-value=5.2e-18  Score=79.70  Aligned_cols=60  Identities=18%  Similarity=0.359  Sum_probs=55.6

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhh-h-cCCCCccCCCCCCccCCchhhhhhhhhcCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRA-H-IGDRPYKCFVCPYRSNQRANLMSHPLVQIS   89 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~-h-~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~   89 (102)
                      ++.++++|.|..|++.|.....|..|++. | .+++||.|..|++.|...+.|..|++++++
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             ccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            45599999999999999999999999998 7 689999999999999999999999999876

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.70  E-value=3.2e-18  Score=90.08  Aligned_cols=68  Identities=15%  Similarity=0.295  Sum_probs=60.8

Q ss_pred             CHHHHHHHHhhhccccccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCC
Q psy14694         14 DTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISD   90 (102)
Q Consensus        14 ~~~~l~~h~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~   90 (102)
                      ....|..|+ .|+      ++++|.|..|++.|.....|..|+++|  ++||.|..|++.|...+.|..|+++|+|+
T Consensus        59 ~~~~l~~h~-~h~------~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           59 ESSYLYRLL-ASK------AISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             THHHHHHHH-HHH------HHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             CHHHHHHHH-HhC------CCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            556666666 455      899999999999999999999999999  89999999999999999999999999887

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.69  E-value=1.7e-17  Score=80.35  Aligned_cols=66  Identities=15%  Similarity=0.271  Sum_probs=59.8

Q ss_pred             cCCCCceeCCCCCCCCCCcchHHHHhhhhcC---CCCccCCCCCCccCCchhhhhhh-hhcCCCCccccc
Q psy14694         31 QSSRKKYDCFMCPYRTPYSGTMRRHIRAHIG---DRPYKCFVCPYRSNQRANLMSHP-LVQISDEQLRFK   96 (102)
Q Consensus        31 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~---~~~~~c~~c~~~f~~~~~l~~h~-~~~~~~~~~~C~   96 (102)
                      |.++++|.|..|++.|.....|..|+++|.+   +++|.|..|++.|.....|..|+ +.|.++++....
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~   71 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQE   71 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCCSS
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCccc
Confidence            5599999999999999999999999999986   89999999999999999999998 568888876644

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.69  E-value=7.8e-18  Score=73.82  Aligned_cols=45  Identities=18%  Similarity=0.276  Sum_probs=41.6

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            467789999999999999999999999999999999999999987

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.69  E-value=4.3e-17  Score=78.19  Aligned_cols=58  Identities=24%  Similarity=0.597  Sum_probs=55.4

Q ss_pred             CccCCccccccccCHHHHHHHHhhhccccccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCc
Q psy14694          1 ILKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPY   65 (102)
Q Consensus         1 ~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~   65 (102)
                      ||.|..|++.|. ....|..|++.|.      ++++|.|..|++.|.....|..|+++|++++||
T Consensus        17 ~~~C~~C~k~f~-~~~~l~~H~~~H~------~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           17 PYKCDRCQASFR-YKGNLASHKTVHT------GEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             SBCCTTSSCCBS-CHHHHHHHHHHHC------CCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CeECCCCCceeC-CHHHHHHHHHHcC------CCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            689999999999 9999999999998      999999999999999999999999999999886

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.69  E-value=1e-17  Score=73.42  Aligned_cols=45  Identities=20%  Similarity=0.284  Sum_probs=41.6

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            367789999999999999999999999999999999999999987

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.69  E-value=1.1e-17  Score=84.75  Aligned_cols=67  Identities=18%  Similarity=0.379  Sum_probs=58.7

Q ss_pred             CccCCccccccccCHHHHHHHHh-hhccccccCCCCceeCCCCCCCCCCcchHHHH-hhhhcCCCCccCCCCC
Q psy14694          1 ILKCTHCKVDLNLDTEIILQHYK-LCSEGARQSSRKKYDCFMCPYRTPYSGTMRRH-IRAHIGDRPYKCFVCP   71 (102)
Q Consensus         1 ~~~c~~c~~~f~~~~~~l~~h~~-~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h-~~~h~~~~~~~c~~c~   71 (102)
                      ||.|..|++.|. ....|..|++ .|..   ..++++|.|..|++.|.....|..| +++|+|++||.|..+.
T Consensus        18 py~C~~Cgk~F~-~~~~L~~H~r~~H~~---~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           18 GYECKYCTFQTP-DLNMFTFHVDSEHPN---VVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             SEECSSCSCEES-CHHHHHHHHHHHCSS---CCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             CcCCCCCCCccC-CHHHHHHHHHhhCCC---CCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            789999999999 9999999997 4720   0168999999999999999999999 8999999999998754

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.68  E-value=7.9e-18  Score=73.79  Aligned_cols=45  Identities=16%  Similarity=0.212  Sum_probs=41.9

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            467789999999999999999999999999999999999999987

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.68  E-value=1.2e-17  Score=73.22  Aligned_cols=45  Identities=18%  Similarity=0.316  Sum_probs=41.0

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366788999999999999999999999999999999999999987

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.68  E-value=7.2e-18  Score=73.95  Aligned_cols=45  Identities=20%  Similarity=0.340  Sum_probs=41.4

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      +|+++|++++||.|..|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467789999999999999999999999999999999999999987

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.68  E-value=1.3e-17  Score=73.10  Aligned_cols=45  Identities=24%  Similarity=0.291  Sum_probs=41.3

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            366789999999999999999999999999999999999999987

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.68  E-value=7.6e-18  Score=73.86  Aligned_cols=45  Identities=20%  Similarity=0.335  Sum_probs=41.7

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            367789999999999999999999999999999999999999987

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.68  E-value=1.4e-17  Score=72.96  Aligned_cols=45  Identities=13%  Similarity=0.273  Sum_probs=41.6

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367789999999999999999999999999999999999999987

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.68  E-value=1.1e-17  Score=73.34  Aligned_cols=45  Identities=11%  Similarity=0.211  Sum_probs=41.8

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367789999999999999999999999999999999999999987

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.68  E-value=1e-17  Score=73.43  Aligned_cols=45  Identities=13%  Similarity=0.221  Sum_probs=41.7

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467789999999999999999999999999999999999999987

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.68  E-value=9.4e-18  Score=73.55  Aligned_cols=45  Identities=24%  Similarity=0.361  Sum_probs=41.9

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      +|+++|++++||.|..|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467789999999999999999999999999999999999999987

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.68  E-value=1.1e-17  Score=73.33  Aligned_cols=45  Identities=20%  Similarity=0.328  Sum_probs=41.6

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            467789999999999999999999999999999999999999987

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.68  E-value=1.5e-17  Score=72.87  Aligned_cols=45  Identities=16%  Similarity=0.248  Sum_probs=41.5

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            366789999999999999999999999999999999999999987

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.68  E-value=1.2e-17  Score=73.16  Aligned_cols=45  Identities=13%  Similarity=0.209  Sum_probs=41.6

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            467789999999999999999999999999999999999999987

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.68  E-value=8.2e-18  Score=73.74  Aligned_cols=45  Identities=16%  Similarity=0.248  Sum_probs=41.6

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            467789999999999999999999999999999999999999987

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.68  E-value=1.2e-17  Score=73.26  Aligned_cols=45  Identities=18%  Similarity=0.285  Sum_probs=41.8

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            367789999999999999999999999999999999999999987

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.68  E-value=1.2e-17  Score=73.19  Aligned_cols=45  Identities=20%  Similarity=0.327  Sum_probs=41.8

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467789999999999999999999999999999999999999986

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.68  E-value=1.2e-17  Score=73.17  Aligned_cols=45  Identities=18%  Similarity=0.267  Sum_probs=41.7

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            467789999999999999999999999999999999999999987

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.68  E-value=3.4e-17  Score=82.31  Aligned_cols=58  Identities=9%  Similarity=0.019  Sum_probs=54.4

Q ss_pred             CCCCCcchHHHHhhhhcCCCCccCCCCCCcc-CCchhhhhhhhhcCCCCccccccccccC
Q psy14694         44 YRTPYSGTMRRHIRAHIGDRPYKCFVCPYRS-NQRANLMSHPLVQISDEQLRFKKIRIAV  102 (102)
Q Consensus        44 ~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f-~~~~~l~~h~~~~~~~~~~~C~~c~~~~  102 (102)
                      ..+.....|..|++.+.++++|.|..|++.| .....|..|+++| ++++|.|+.|+++|
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F   72 (96)
T 2ctd_A           14 PVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQL   72 (96)
T ss_dssp             CSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCC
T ss_pred             CCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCee
Confidence            3567788899999999999999999999999 9999999999999 99999999999998

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.68  E-value=1.7e-17  Score=72.74  Aligned_cols=45  Identities=20%  Similarity=0.361  Sum_probs=41.2

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      .|+++|++++||+|..|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366788999999999999999999999999999999999999987

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.68  E-value=1.6e-17  Score=72.82  Aligned_cols=45  Identities=22%  Similarity=0.337  Sum_probs=41.5

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            366789999999999999999999999999999999999999987

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.68  E-value=1.4e-17  Score=72.96  Aligned_cols=45  Identities=18%  Similarity=0.270  Sum_probs=41.9

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            467789999999999999999999999999999999999999987

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.68  E-value=9.7e-18  Score=73.52  Aligned_cols=45  Identities=9%  Similarity=0.117  Sum_probs=41.9

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      +|+++|++++||.|..|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            467789999999999999999999999999999999999999987

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.68  E-value=1.5e-17  Score=72.90  Aligned_cols=45  Identities=16%  Similarity=0.358  Sum_probs=41.7

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            467789999999999999999999999999999999999999987

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.67  E-value=1.4e-17  Score=72.95  Aligned_cols=45  Identities=20%  Similarity=0.379  Sum_probs=41.4

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366789999999999999999999999999999999999999987

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.67  E-value=1.2e-17  Score=73.16  Aligned_cols=45  Identities=18%  Similarity=0.264  Sum_probs=41.3

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            367788999999999999999999999999999999999999987

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.67  E-value=1.2e-17  Score=73.16  Aligned_cols=45  Identities=22%  Similarity=0.284  Sum_probs=41.4

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367789999999999999999999999999999999999999987

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.67  E-value=9.9e-18  Score=73.48  Aligned_cols=45  Identities=18%  Similarity=0.260  Sum_probs=41.5

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            467789999999999999999999999999999999999999987

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.67  E-value=1.1e-17  Score=73.31  Aligned_cols=45  Identities=13%  Similarity=0.079  Sum_probs=41.6

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            467789999999999999999999999999999999999999987

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.67  E-value=8.6e-18  Score=73.67  Aligned_cols=45  Identities=18%  Similarity=0.322  Sum_probs=41.4

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            367789999999999999999999999999999999999999987

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.67  E-value=1.1e-17  Score=72.63  Aligned_cols=44  Identities=14%  Similarity=0.301  Sum_probs=40.1

Q ss_pred             HhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         55 HIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        55 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      |+++|++++||.|..|++.|...+.|..|+++|++++||.|+.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45678999999999999999999999999999999999999887

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.67  E-value=1.8e-17  Score=72.59  Aligned_cols=45  Identities=18%  Similarity=0.279  Sum_probs=41.4

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367789999999999999999999999999999999999999987

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.67  E-value=1e-17  Score=73.40  Aligned_cols=45  Identities=20%  Similarity=0.286  Sum_probs=41.4

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            367789999999999999999999999999999999999999987

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.67  E-value=1.4e-17  Score=72.98  Aligned_cols=45  Identities=20%  Similarity=0.288  Sum_probs=41.4

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367789999999999999999999999999999999999999987

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.67  E-value=8.2e-18  Score=73.76  Aligned_cols=45  Identities=16%  Similarity=0.253  Sum_probs=41.2

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367789999999999999999999999999999999999999987

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.67  E-value=8e-18  Score=73.78  Aligned_cols=45  Identities=24%  Similarity=0.418  Sum_probs=41.2

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            367789999999999999999999999999999999999999987

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.67  E-value=1.3e-17  Score=84.06  Aligned_cols=58  Identities=17%  Similarity=0.162  Sum_probs=53.6

Q ss_pred             CCCCcchHHHHhhhhcCCCCccCCCCCCccC-CchhhhhhhhhcCC-CCccccccccccC
Q psy14694         45 RTPYSGTMRRHIRAHIGDRPYKCFVCPYRSN-QRANLMSHPLVQIS-DEQLRFKKIRIAV  102 (102)
Q Consensus        45 ~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~-~~~~l~~h~~~~~~-~~~~~C~~c~~~~  102 (102)
                      .+.....+..|+++|.++++|.|..|++.|. ....|..|+++|++ +++|.|+.|+++|
T Consensus         5 s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F   64 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQF   64 (98)
T ss_dssp             CCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCC
T ss_pred             CCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCcc
Confidence            3555677889999999999999999999999 99999999999999 9999999999998

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.67  E-value=8.3e-17  Score=74.18  Aligned_cols=56  Identities=23%  Similarity=0.587  Sum_probs=48.7

Q ss_pred             CceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhhhhhh-hhcCCC
Q psy14694         35 KKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHP-LVQISD   90 (102)
Q Consensus        35 ~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~-~~~~~~   90 (102)
                      ++|.|..|++.|.....|..|+++|.+++||.|..|++.|.....|..|+ ++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            46888899999999999999999999899999999999999999999995 678765

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.66  E-value=8.5e-18  Score=73.72  Aligned_cols=45  Identities=18%  Similarity=0.290  Sum_probs=41.2

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            467789999999999999999999999999999999999999887

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=1e-16  Score=77.36  Aligned_cols=64  Identities=27%  Similarity=0.484  Sum_probs=56.1

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhh-hhcCC-CCccCCCCCCccCCchhhhhhhhh-cCCCCcc
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIR-AHIGD-RPYKCFVCPYRSNQRANLMSHPLV-QISDEQL   93 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~-~h~~~-~~~~c~~c~~~f~~~~~l~~h~~~-~~~~~~~   93 (102)
                      +|.++++|.|..|++.|.....|..|++ .|.++ ++|.|..|++.|.....|..|++. |.++.|.
T Consensus         9 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p~   75 (77)
T 2ct1_A            9 THSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGPS   75 (77)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSCCC
T ss_pred             ccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            3449999999999999999999999997 68775 899999999999999999999998 5555553

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.66  E-value=2.1e-17  Score=72.44  Aligned_cols=45  Identities=24%  Similarity=0.348  Sum_probs=41.9

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467889999999999999999999999999999999999999987

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.66  E-value=2.6e-17  Score=72.11  Aligned_cols=44  Identities=18%  Similarity=0.269  Sum_probs=41.0

Q ss_pred             HhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         55 HIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        55 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|+.|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56789999999999999999999999999999999999999987

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.66  E-value=2.4e-17  Score=72.26  Aligned_cols=44  Identities=16%  Similarity=0.204  Sum_probs=40.9

Q ss_pred             HhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         55 HIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        55 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      |+++|++++||.|..|++.|...+.|..|+++|++++||.|+.|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            56789999999999999999999999999999999999999987

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.66  E-value=4.5e-17  Score=73.72  Aligned_cols=45  Identities=18%  Similarity=0.228  Sum_probs=37.3

Q ss_pred             hhcCCCCccCCCCCCccCCchhhhhhhh-hcCCCCccccccccccC
Q psy14694         58 AHIGDRPYKCFVCPYRSNQRANLMSHPL-VQISDEQLRFKKIRIAV  102 (102)
Q Consensus        58 ~h~~~~~~~c~~c~~~f~~~~~l~~h~~-~~~~~~~~~C~~c~~~~  102 (102)
                      .+.+++||.|..|++.|.....|..|++ +|++++||.|+.|+++|
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F   51 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP   51 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSS
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCC
Confidence            3567788888888888888888888876 78888888888888877

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.66  E-value=1.3e-17  Score=73.08  Aligned_cols=45  Identities=22%  Similarity=0.299  Sum_probs=41.0

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            366788999999999999999999999999999999999999987

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.66  E-value=2e-17  Score=72.47  Aligned_cols=45  Identities=20%  Similarity=0.403  Sum_probs=41.4

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467789999999999999999999999999999999999999875

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.66  E-value=2.4e-17  Score=72.24  Aligned_cols=44  Identities=11%  Similarity=0.124  Sum_probs=40.5

Q ss_pred             HhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         55 HIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        55 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      |+++|++++||.|..|++.|...+.|..|+++|++++||+|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56788999999999999999999999999999999999999887

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.66  E-value=1.8e-17  Score=72.64  Aligned_cols=44  Identities=16%  Similarity=0.292  Sum_probs=40.1

Q ss_pred             HhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         55 HIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        55 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|+.|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56788999999999999999999999999999999999999887

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.66  E-value=1.7e-17  Score=72.75  Aligned_cols=45  Identities=24%  Similarity=0.320  Sum_probs=41.5

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            367789999999999999999999999999999999999999987

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.65  E-value=4.8e-17  Score=71.49  Aligned_cols=45  Identities=18%  Similarity=0.258  Sum_probs=41.4

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhh-hcCCCCccccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPL-VQISDEQLRFKKI   98 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~-~~~~~~~~~C~~c   98 (102)
                      .|+++|++++||.|..|++.|.....|..|++ +|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            36778999999999999999999999999999 9999999999987

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.65  E-value=1.4e-17  Score=73.01  Aligned_cols=45  Identities=18%  Similarity=0.267  Sum_probs=41.2

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            366789999999999999999999999999999999999999987

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=1.3e-16  Score=76.21  Aligned_cols=60  Identities=27%  Similarity=0.547  Sum_probs=55.5

Q ss_pred             cccCCCCceeCC--CCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcC
Q psy14694         29 ARQSSRKKYDCF--MCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQI   88 (102)
Q Consensus        29 ~~~~~~~~~~c~--~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~   88 (102)
                      .+++++++|.|.  .|++.|.....|..|+++|.++++|.|..|++.|.....|..|+++|+
T Consensus        12 ~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           12 YVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             ccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            345689999997  699999999999999999999999999999999999999999999885

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=4.2e-16  Score=76.50  Aligned_cols=67  Identities=19%  Similarity=0.311  Sum_probs=61.2

Q ss_pred             CccCCccccccccCHHHHHHHHhhhccccccCCC----CceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCcc
Q psy14694          1 ILKCTHCKVDLNLDTEIILQHYKLCSEGARQSSR----KKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRS   74 (102)
Q Consensus         1 ~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~----~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f   74 (102)
                      ||.|..|++.|. ....|..|++.++      .+    ++|.|..|++.|.....|..|+++|.+++++.|..|+..+
T Consensus        15 ~~~C~~C~~~f~-~~~~l~~H~~~~~------~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           15 PYACSHCDKTFR-QKQLLDMHFKRYH------DPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS   85 (86)
T ss_dssp             CEECSSSSCEES-SHHHHHHHHHHTT------CSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCCCCC
T ss_pred             CCcCCCCCCccC-CHHHHHHHHHHhc------CCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCCCCC
Confidence            689999999999 9999999998765      43    7899999999999999999999999999999999998764

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.64  E-value=3e-17  Score=71.95  Aligned_cols=44  Identities=23%  Similarity=0.331  Sum_probs=40.0

Q ss_pred             HhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         55 HIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        55 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|+.|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            56778899999999999999999999999999999999999887

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.63  E-value=1.3e-17  Score=77.57  Aligned_cols=47  Identities=17%  Similarity=0.200  Sum_probs=31.3

Q ss_pred             HHHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccccccC
Q psy14694         53 RRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKIRIAV  102 (102)
Q Consensus        53 ~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c~~~~  102 (102)
                      ..|+++|++++||.|..|++.|.....|.   ++|++++||.|+.||++|
T Consensus         3 ~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f   49 (62)
T 1vd4_A            3 ETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEV   49 (62)
T ss_dssp             CCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBC
T ss_pred             hhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCcc
Confidence            34556666777777777777776666654   567777777777777665

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.63  E-value=4.4e-16  Score=70.97  Aligned_cols=56  Identities=14%  Similarity=0.529  Sum_probs=53.1

Q ss_pred             CccCCccccccccCHHHHHHHHhhhccccccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCC
Q psy14694          1 ILKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDR   63 (102)
Q Consensus         1 ~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~   63 (102)
                      ||.|..|++.|. ....|..|+++|.      ++++|.|..|++.|.....|..|+++|.+++
T Consensus         1 p~~C~~C~~~f~-~~~~l~~H~~~h~------~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXK-KPSMLKKHIRTHT------DVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCS-SHHHHHHHHHHTS------SCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCC-CHHHHHHHHHhcC------CCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            799999999999 9999999999988      9999999999999999999999999998775

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.63  E-value=7.2e-17  Score=70.69  Aligned_cols=45  Identities=20%  Similarity=0.288  Sum_probs=40.7

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      .|+++|+++++|.|..|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            366788999999999999999999999999999999999999875

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=3.1e-17  Score=79.25  Aligned_cols=51  Identities=22%  Similarity=0.509  Sum_probs=46.6

Q ss_pred             HHHHhhhhcCCCCccCCCCCCccCCchhhhhhhh-hcCCC-CccccccccccC
Q psy14694         52 MRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPL-VQISD-EQLRFKKIRIAV  102 (102)
Q Consensus        52 l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~-~~~~~-~~~~C~~c~~~~  102 (102)
                      +..|+++|++++||.|..|++.|.....|..|++ .|.++ ++|.|+.|+++|
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f   55 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVI   55 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEE
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCcc
Confidence            4578899999999999999999999999999997 68875 899999999987

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.62  E-value=1.4e-16  Score=69.74  Aligned_cols=44  Identities=20%  Similarity=0.277  Sum_probs=39.8

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCcccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKK   97 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~   97 (102)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             CCCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36678899999999999999999999999999999999999975

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.62  E-value=1.4e-16  Score=69.71  Aligned_cols=44  Identities=23%  Similarity=0.381  Sum_probs=40.0

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCcccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKK   97 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~   97 (102)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            46778999999999999999999999999999999999999974

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.62  E-value=1.4e-16  Score=69.70  Aligned_cols=44  Identities=20%  Similarity=0.339  Sum_probs=39.7

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCcccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKK   97 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~   97 (102)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            36678899999999999999999999999999999999999974

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.62  E-value=1.8e-16  Score=69.40  Aligned_cols=44  Identities=20%  Similarity=0.358  Sum_probs=40.0

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCcccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKK   97 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~   97 (102)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            36678999999999999999999999999999999999999974

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.62  E-value=1.5e-16  Score=68.30  Aligned_cols=42  Identities=21%  Similarity=0.394  Sum_probs=38.2

Q ss_pred             HhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccc
Q psy14694         55 HIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFK   96 (102)
Q Consensus        55 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~   96 (102)
                      |+++|++++||.|..|++.|...+.|..|+++|++++||.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            456789999999999999999999999999999999999985

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.62  E-value=2e-16  Score=69.23  Aligned_cols=43  Identities=23%  Similarity=0.392  Sum_probs=39.5

Q ss_pred             HhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCcccccc
Q psy14694         55 HIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKK   97 (102)
Q Consensus        55 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~   97 (102)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|+.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            5678899999999999999999999999999999999999974

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.61  E-value=1.6e-16  Score=69.58  Aligned_cols=44  Identities=16%  Similarity=0.323  Sum_probs=40.1

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCcccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKK   97 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~   97 (102)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36778999999999999999999999999999999999999974

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.61  E-value=1.2e-16  Score=69.99  Aligned_cols=44  Identities=18%  Similarity=0.379  Sum_probs=40.0

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCcccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKK   97 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~   97 (102)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            36778999999999999999999999999999999999999974

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.61  E-value=1.8e-16  Score=69.35  Aligned_cols=44  Identities=16%  Similarity=0.323  Sum_probs=39.7

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCcccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKK   97 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~   97 (102)
                      .|+++|+++++|.|..|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            46778899999999999999999999999999999999999974

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.61  E-value=1.7e-16  Score=69.44  Aligned_cols=43  Identities=21%  Similarity=0.334  Sum_probs=39.6

Q ss_pred             hhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         56 IRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        56 ~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      +++|+++++|.|..|++.|.....|..|+++|++++||.|+.|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4578899999999999999999999999999999999999987

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.61  E-value=1.6e-16  Score=69.23  Aligned_cols=42  Identities=19%  Similarity=0.311  Sum_probs=38.1

Q ss_pred             hhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCcccccccc
Q psy14694         58 AHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKIR   99 (102)
Q Consensus        58 ~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c~   99 (102)
                      .|++++||.|..|++.|.....|..|+++|+++++|.|+.||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            578889999999999999999999999999999999999986

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.61  E-value=2.4e-16  Score=68.99  Aligned_cols=44  Identities=20%  Similarity=0.341  Sum_probs=39.7

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCcccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKK   97 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~   97 (102)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            36678899999999999999999999999999999999999974

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.61  E-value=2.4e-16  Score=68.96  Aligned_cols=44  Identities=23%  Similarity=0.365  Sum_probs=39.9

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCcccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKK   97 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~   97 (102)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            36678999999999999999999999999999999999999974

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.61  E-value=2.5e-16  Score=68.91  Aligned_cols=44  Identities=16%  Similarity=0.316  Sum_probs=39.7

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCcccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKK   97 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~   97 (102)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36778899999999999999999999999999999999999974

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.61  E-value=2.5e-16  Score=69.54  Aligned_cols=43  Identities=12%  Similarity=0.085  Sum_probs=39.0

Q ss_pred             hhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccccc
Q psy14694         58 AHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKIRI  100 (102)
Q Consensus        58 ~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c~~  100 (102)
                      .+.++++|.|.+|++.|.....|..|+++|++++||.|+.|+|
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            3677889999999999999999999999999999999999986

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.61  E-value=1.1e-16  Score=70.03  Aligned_cols=44  Identities=14%  Similarity=0.320  Sum_probs=39.7

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCcccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKK   97 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~   97 (102)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36778899999999999999999999999999999999999974

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.61  E-value=3e-16  Score=67.32  Aligned_cols=42  Identities=17%  Similarity=0.328  Sum_probs=37.8

Q ss_pred             HhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccc
Q psy14694         55 HIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFK   96 (102)
Q Consensus        55 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~   96 (102)
                      |+++|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            456788999999999999999999999999999999999884

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=2.6e-16  Score=68.83  Aligned_cols=44  Identities=18%  Similarity=0.313  Sum_probs=40.0

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCcccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKK   97 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~   97 (102)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            36678999999999999999999999999999999999999974

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=3.9e-16  Score=66.96  Aligned_cols=41  Identities=22%  Similarity=0.361  Sum_probs=38.4

Q ss_pred             HhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCcccc
Q psy14694         55 HIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRF   95 (102)
Q Consensus        55 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C   95 (102)
                      |+++|++++||.|..|++.|...+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            66789999999999999999999999999999999999987

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=8.9e-16  Score=72.78  Aligned_cols=58  Identities=17%  Similarity=0.477  Sum_probs=54.8

Q ss_pred             CccCCccccccccCHHHHHHHHhhhccccccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCc
Q psy14694          1 ILKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPY   65 (102)
Q Consensus         1 ~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~   65 (102)
                      ||.|..|++.|. ....|..|+++|.      ++++|.|..|++.|.....|..|+++|.+++|.
T Consensus         9 ~~~C~~C~k~f~-~~~~L~~H~~~H~------~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            9 PEKCSECSYSCS-SKAALRIHERIHC------TDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             SEECSSSSCEES-SHHHHHHHHGGGC------CSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CeECCCCCcccC-CHHHHHHHHHHcC------CCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            689999999999 9999999999988      999999999999999999999999999998874

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=2.7e-16  Score=68.81  Aligned_cols=44  Identities=18%  Similarity=0.270  Sum_probs=39.9

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCcccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKK   97 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~   97 (102)
                      .|+++|+++++|.|..|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            36778999999999999999999999999999999999999974

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=3.1e-16  Score=67.95  Aligned_cols=43  Identities=16%  Similarity=0.257  Sum_probs=39.1

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFK   96 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~   96 (102)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            3677899999999999999999999999999999999999985

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=1.6e-16  Score=69.52  Aligned_cols=43  Identities=16%  Similarity=0.241  Sum_probs=38.4

Q ss_pred             hhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         56 IRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        56 ~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      +++|+++++|.|..|++.|.....|..|+++|++++||.|+.|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4568889999999999999999999999999999999999887

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=2e-16  Score=69.18  Aligned_cols=44  Identities=20%  Similarity=0.344  Sum_probs=39.6

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCcccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKK   97 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~   97 (102)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            36678899999999999999999999999999999999999974

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=2.6e-16  Score=68.81  Aligned_cols=44  Identities=18%  Similarity=0.388  Sum_probs=39.9

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCcccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKK   97 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~   97 (102)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36678899999999999999999999999999999999999974

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.60  E-value=3e-16  Score=70.94  Aligned_cols=52  Identities=15%  Similarity=0.126  Sum_probs=48.0

Q ss_pred             CCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccc
Q psy14694         43 PYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLR   94 (102)
Q Consensus        43 ~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~   94 (102)
                      ++.|.....|..|+++|++++||.|..|++.|...+.|..|+++|+|++||.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            3567888889999999999999999999999999999999999999999984

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.60  E-value=2.3e-15  Score=75.14  Aligned_cols=60  Identities=13%  Similarity=0.175  Sum_probs=55.2

Q ss_pred             ccCCccccccccCHHHHHHHHhh-hccccccCCCCc--------eeCCCCCCCCCCcchHHHHhhhhcCCCCccCC
Q psy14694          2 LKCTHCKVDLNLDTEIILQHYKL-CSEGARQSSRKK--------YDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCF   68 (102)
Q Consensus         2 ~~c~~c~~~f~~~~~~l~~h~~~-~~~~~~~~~~~~--------~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~   68 (102)
                      |.|..|++.|. ....|..|+++ |.      ++++        |.|..|++.|.....|..|+++|++++||.|.
T Consensus        26 ~~C~~C~k~f~-~~~~L~~H~~~~H~------~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           26 RPKKSCDRTFS-TMHELVTHVTMEHV------GGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSCCCCCCCCS-SHHHHHHHHHHTTT------CCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CcccccccccC-CHHHHHHHHHHhcc------CCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            56999999999 99999999998 76      6666        89999999999999999999999999999986

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=3.4e-16  Score=68.46  Aligned_cols=44  Identities=20%  Similarity=0.416  Sum_probs=39.5

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCcccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKK   97 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~   97 (102)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36678899999999999999999999999999999999999974

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=2.3e-16  Score=69.01  Aligned_cols=44  Identities=23%  Similarity=0.420  Sum_probs=39.6

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCcccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKK   97 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~   97 (102)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            46778899999999999999999999999999999999999974

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=1.9e-16  Score=69.34  Aligned_cols=44  Identities=18%  Similarity=0.332  Sum_probs=39.9

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCcccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKK   97 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~   97 (102)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTBC
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCCC
Confidence            46778999999999999999999999999999999999999974

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.60  E-value=3.6e-16  Score=73.40  Aligned_cols=58  Identities=17%  Similarity=0.256  Sum_probs=54.4

Q ss_pred             CCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCC-CCCCccCCchhhhhhhhhcCCCCc
Q psy14694         33 SRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCF-VCPYRSNQRANLMSHPLVQISDEQ   92 (102)
Q Consensus        33 ~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~-~c~~~f~~~~~l~~h~~~~~~~~~   92 (102)
                      ++++|.|..|++.|. ...|..|+++ ++++||.|. .|++.|...+.|..|+++|...++
T Consensus         7 ~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            7 GKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            788999999999999 9999999999 999999999 999999999999999999887765

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.59  E-value=3.6e-16  Score=68.42  Aligned_cols=44  Identities=16%  Similarity=0.259  Sum_probs=39.1

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCcccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKK   97 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~   97 (102)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            35678899999999999999999999999999999999999874

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.59  E-value=2.1e-16  Score=69.13  Aligned_cols=44  Identities=16%  Similarity=0.305  Sum_probs=39.3

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCcccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKK   97 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~   97 (102)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            36778899999999999999999999999999999999999974

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.59  E-value=5.9e-16  Score=67.71  Aligned_cols=43  Identities=23%  Similarity=0.402  Sum_probs=38.4

Q ss_pred             HhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCcccccc
Q psy14694         55 HIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKK   97 (102)
Q Consensus        55 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~   97 (102)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|+.
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5567889999999999999999999999999999999999864

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.59  E-value=3.6e-16  Score=68.37  Aligned_cols=44  Identities=23%  Similarity=0.399  Sum_probs=39.9

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCcccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKK   97 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~   97 (102)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            36678999999999999999999999999999999999999973

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.59  E-value=3.3e-16  Score=67.91  Aligned_cols=43  Identities=16%  Similarity=0.217  Sum_probs=39.3

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFK   96 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~   96 (102)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            4677899999999999999999999999999999999999985

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.59  E-value=3.6e-16  Score=67.73  Aligned_cols=43  Identities=23%  Similarity=0.417  Sum_probs=39.2

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFK   96 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~   96 (102)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            3677899999999999999999999999999999999999985

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.59  E-value=1.4e-16  Score=69.75  Aligned_cols=44  Identities=23%  Similarity=0.299  Sum_probs=39.9

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCcccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKK   97 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~   97 (102)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            46778999999999999999999999999999999999999974

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.59  E-value=3.1e-16  Score=67.96  Aligned_cols=43  Identities=21%  Similarity=0.306  Sum_probs=39.0

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFK   96 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~   96 (102)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            4677899999999999999999999999999999999999884

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.59  E-value=5.6e-16  Score=66.52  Aligned_cols=41  Identities=22%  Similarity=0.349  Sum_probs=37.5

Q ss_pred             HhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCcccc
Q psy14694         55 HIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRF   95 (102)
Q Consensus        55 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C   95 (102)
                      |+++|++++||.|..|++.|...+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            56678899999999999999999999999999999999987

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.58  E-value=2.7e-16  Score=68.13  Aligned_cols=43  Identities=19%  Similarity=0.331  Sum_probs=39.3

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFK   96 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~   96 (102)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3677899999999999999999999999999999999999985

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=2.4e-16  Score=73.93  Aligned_cols=46  Identities=15%  Similarity=0.205  Sum_probs=43.1

Q ss_pred             hhhcCCCCccCCCCCCccCCchhhhhhhhh-c-CCCCccccccccccC
Q psy14694         57 RAHIGDRPYKCFVCPYRSNQRANLMSHPLV-Q-ISDEQLRFKKIRIAV  102 (102)
Q Consensus        57 ~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~-~-~~~~~~~C~~c~~~~  102 (102)
                      ++|++++||.|..|++.|.....|..|+++ | .++++|.|+.|+++|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f   50 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEF   50 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEE
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCcc
Confidence            568899999999999999999999999998 7 699999999999987

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.58  E-value=5.3e-16  Score=67.86  Aligned_cols=44  Identities=11%  Similarity=0.086  Sum_probs=39.6

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCC-CCcccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQIS-DEQLRFKK   97 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~-~~~~~C~~   97 (102)
                      .|+++|++++||.|..|++.|.....|..|+++|++ ++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366788999999999999999999999999999999 99999973

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.58  E-value=2.2e-16  Score=69.13  Aligned_cols=44  Identities=20%  Similarity=0.348  Sum_probs=38.8

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCcccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKK   97 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~   97 (102)
                      .|+++|.+++||.|..|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36678889999999999999999999999999999999999874

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.57  E-value=2e-15  Score=74.14  Aligned_cols=56  Identities=21%  Similarity=0.424  Sum_probs=51.6

Q ss_pred             CccCCccccccccCHHHHHHHHhhhccccccCCCCceeCCCCCCCCCCcchHHHHh-hhhcCCC
Q psy14694          1 ILKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHI-RAHIGDR   63 (102)
Q Consensus         1 ~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~-~~h~~~~   63 (102)
                      +|.|+.|++.|. ....|..|+++|+      ++++|.|..|++.|.....|..|+ +.|++|.
T Consensus        28 ~h~C~~Cgk~F~-~~~~L~~H~~~H~------~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           28 CHLCPVCGESFA-SKGAQERHLRLLH------AAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             TEECTTSCCEES-SHHHHHHHHHTTS------CSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CEECCCCCCCcC-cHHHHhhhhhhcc------CCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            578999999999 9999999999998      999999999999999999999996 5688763

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.57  E-value=1.6e-17  Score=87.43  Aligned_cols=66  Identities=12%  Similarity=0.075  Sum_probs=53.6

Q ss_pred             CCceeCCCCCC------CCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccccccC
Q psy14694         34 RKKYDCFMCPY------RTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKIRIAV  102 (102)
Q Consensus        34 ~~~~~c~~c~~------~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c~~~~  102 (102)
                      ++.+.|+.|.+      .|.....|..|+ .|++++||.|..|++.|.....|..|+++|  ++||.|+.|+++|
T Consensus        39 ~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f  110 (129)
T 2wbt_A           39 QKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEF  110 (129)
T ss_dssp             HHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBC
T ss_pred             hCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCccc
Confidence            34455555443      344556666666 588899999999999999999999999999  8999999999988

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.57  E-value=6.7e-16  Score=66.22  Aligned_cols=41  Identities=22%  Similarity=0.226  Sum_probs=37.2

Q ss_pred             HhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCcccc
Q psy14694         55 HIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRF   95 (102)
Q Consensus        55 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C   95 (102)
                      |+++|++++||.|..|++.|...+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            45678899999999999999999999999999999999987

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.57  E-value=8.4e-16  Score=66.60  Aligned_cols=42  Identities=10%  Similarity=0.102  Sum_probs=37.2

Q ss_pred             HhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccc
Q psy14694         55 HIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFK   96 (102)
Q Consensus        55 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~   96 (102)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|+
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            456788899999999999999999999999999999999885

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.56  E-value=5.9e-16  Score=67.66  Aligned_cols=44  Identities=18%  Similarity=0.368  Sum_probs=39.8

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCcccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKK   97 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~   97 (102)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36778999999999999999999999999999999999999974

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.56  E-value=4.3e-16  Score=66.87  Aligned_cols=41  Identities=29%  Similarity=0.416  Sum_probs=36.9

Q ss_pred             HhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCcccc
Q psy14694         55 HIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRF   95 (102)
Q Consensus        55 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C   95 (102)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            56778899999999999999999999999999999999987

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=4.4e-15  Score=70.71  Aligned_cols=56  Identities=21%  Similarity=0.489  Sum_probs=52.8

Q ss_pred             CccCCccccccccCHHHHHHHHhhhccccccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCC
Q psy14694          1 ILKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDR   63 (102)
Q Consensus         1 ~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~   63 (102)
                      ||.|+.|++.|. ....|..|+++|.      ++++|.|..|++.|.....|..|+++|+++.
T Consensus        14 ~~~C~~C~k~f~-~~~~L~~H~~~h~------~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A           14 PYGCVECGKAFS-RSSILVQHQRVHT------GEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CEECSSSCCEES-SHHHHHHHHHGGG------CSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CccCCCCCCccC-CHHHHHHHHHhcC------CCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            689999999999 9999999999988      9999999999999999999999999998764

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.56  E-value=1.3e-15  Score=67.11  Aligned_cols=44  Identities=16%  Similarity=0.261  Sum_probs=39.5

Q ss_pred             HhhhhcCCCCccCC--CCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         55 HIRAHIGDRPYKCF--VCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        55 h~~~h~~~~~~~c~--~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      |.++|++++||.|.  .|++.|.....|..|+++|++++||.|+.|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34678899999998  899999999999999999999999999887

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.55  E-value=5.3e-15  Score=67.32  Aligned_cols=53  Identities=21%  Similarity=0.469  Sum_probs=49.7

Q ss_pred             CccCCccccccccCHHHHHHHHhhhccccccCCCCceeCCCCCCCCCCcchHHHHhhhhc
Q psy14694          1 ILKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHI   60 (102)
Q Consensus         1 ~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~   60 (102)
                      ||.|..|++.|. ....|..|+++|.      ++++|.|..|++.|.....|..|++.|.
T Consensus         4 ~~~C~~C~~~f~-~~~~l~~H~~~h~------~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            4 SRECSYCGKFFR-SNYYLNIHLRTHT------GEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             -CBCTTTCCBCS-CHHHHHHHHHHHH------CCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CccCCCCcchhC-ChHHHHHHHHHcC------CCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            699999999999 9999999999998      9999999999999999999999999875

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.55  E-value=4.4e-16  Score=68.11  Aligned_cols=43  Identities=14%  Similarity=0.260  Sum_probs=38.6

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFK   96 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~   96 (102)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4677889999999999999999999999999999999999986

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.54  E-value=3.3e-15  Score=64.42  Aligned_cols=41  Identities=24%  Similarity=0.336  Sum_probs=36.1

Q ss_pred             hhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCcccccc
Q psy14694         57 RAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKK   97 (102)
Q Consensus        57 ~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~   97 (102)
                      ++|++++||.|..|++.|.....|..|+++|++++||.|++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            35788899999999999999999999999999999999864

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.54  E-value=9.6e-16  Score=66.40  Aligned_cols=43  Identities=12%  Similarity=0.152  Sum_probs=38.8

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFK   96 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~   96 (102)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3667889999999999999999999999999999999999883

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=1e-14  Score=67.05  Aligned_cols=55  Identities=24%  Similarity=0.516  Sum_probs=51.2

Q ss_pred             CccCCccccccccCHHHHHHHHhhhccccccCCCCceeCCCCCCCCCCcchHHHHh-hhhcCC
Q psy14694          1 ILKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHI-RAHIGD   62 (102)
Q Consensus         1 ~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~-~~h~~~   62 (102)
                      ||.|+.|++.|. ....|..|+++|.      ++++|.|..|++.|.....|..|+ +.|.++
T Consensus         2 ~~~C~~C~~~f~-~~~~l~~H~~~h~------~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            2 SFVCEVCTRAFA-RQEHLKRHYRSHT------NEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CBCCTTTCCCBS-CHHHHHHHHHTTT------SSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             cCcCCCCccccC-CHHHHHHHHHHhC------CCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            799999999999 9999999999988      999999999999999999999996 678765

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.53  E-value=3.2e-15  Score=65.34  Aligned_cols=42  Identities=17%  Similarity=0.208  Sum_probs=36.3

Q ss_pred             hhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCcccccc
Q psy14694         56 IRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKK   97 (102)
Q Consensus        56 ~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~   97 (102)
                      +++|++++||.|..|++.|.....|..|+++|++++||.|+.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            456888899999999999999999999999999999998863

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.53  E-value=2.8e-15  Score=64.95  Aligned_cols=42  Identities=17%  Similarity=0.226  Sum_probs=38.1

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCcccc
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRF   95 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C   95 (102)
                      .|+++|++++||.|.+|++.|...+.|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            367789999999999999999999999999999999999986

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.53  E-value=1.5e-15  Score=66.06  Aligned_cols=42  Identities=17%  Similarity=0.378  Sum_probs=37.7

Q ss_pred             hhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCcccccc
Q psy14694         56 IRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKK   97 (102)
Q Consensus        56 ~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~   97 (102)
                      .++|++++||.|..|++.|.....|..|+++|++++||.|+.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            456888999999999999999999999999999999999974

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.52  E-value=6e-15  Score=62.88  Aligned_cols=39  Identities=21%  Similarity=0.320  Sum_probs=35.3

Q ss_pred             hhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCcccc
Q psy14694         57 RAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRF   95 (102)
Q Consensus        57 ~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C   95 (102)
                      ++|++++||.|..|++.|.....|..|+++|++++||.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            467889999999999999999999999999999999987

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.52  E-value=1.4e-14  Score=68.95  Aligned_cols=57  Identities=25%  Similarity=0.452  Sum_probs=52.0

Q ss_pred             cCCCCceeCCC--CCCCCCCcchHHHHhhhhcCCCCccCCC--CCCccCCchhhhhhhhhc
Q psy14694         31 QSSRKKYDCFM--CPYRTPYSGTMRRHIRAHIGDRPYKCFV--CPYRSNQRANLMSHPLVQ   87 (102)
Q Consensus        31 ~~~~~~~~c~~--c~~~~~~~~~l~~h~~~h~~~~~~~c~~--c~~~f~~~~~l~~h~~~~   87 (102)
                      ....+++.|..  |++.|.....|..|+++|.+++||.|..  |++.|.....|..|+++|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            34678899988  9999999999999999999999999965  999999999999999875

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.49  E-value=3.4e-14  Score=64.07  Aligned_cols=47  Identities=28%  Similarity=0.436  Sum_probs=43.5

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhh-hhcCCCCccCCCCCCccCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIR-AHIGDRPYKCFVCPYRSNQ   76 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~-~h~~~~~~~c~~c~~~f~~   76 (102)
                      .+.++++|.|..|++.|.....|..|++ +|.+++||.|.+|++.|.+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            3558999999999999999999999997 8999999999999999975

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.45  E-value=9.6e-14  Score=66.93  Aligned_cols=60  Identities=15%  Similarity=0.235  Sum_probs=53.6

Q ss_pred             CccCCccccccccCHHHHHHHHhhhccccccCC---CCceeCCCCCCCCCCcchHHHHh-hhhcCCCCccC
Q psy14694          1 ILKCTHCKVDLNLDTEIILQHYKLCSEGARQSS---RKKYDCFMCPYRTPYSGTMRRHI-RAHIGDRPYKC   67 (102)
Q Consensus         1 ~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~---~~~~~c~~c~~~~~~~~~l~~h~-~~h~~~~~~~c   67 (102)
                      ||.|..|++.|. ....|..|+++|.      +   +++|.|..|++.|.....|..|+ ..|.++++...
T Consensus         7 ~~~C~~C~k~f~-~~~~L~~H~~~h~------~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~   70 (78)
T 2d9h_A            7 GLQCEICGFTCR-QKASLNWHQRKHA------ETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQ   70 (78)
T ss_dssp             CEECSSSCCEES-SHHHHHHHHHHHH------HHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCCS
T ss_pred             CeECCCCCCeeC-CHHHHHHHHHHhh------ccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCcc
Confidence            789999999999 9999999999987      5   78999999999999999999999 56877776543

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.45  E-value=1.4e-13  Score=59.99  Aligned_cols=42  Identities=17%  Similarity=0.347  Sum_probs=38.8

Q ss_pred             cccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         29 ARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        29 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      ++|.++++|.|..|++.|.....|..|+++|++++||+|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            5 SSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            345599999999999999999999999999999999999876

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=1.2e-13  Score=60.20  Aligned_cols=42  Identities=21%  Similarity=0.267  Sum_probs=38.9

Q ss_pred             cccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         29 ARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        29 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      ++|.++++|.|..|++.|.....|..|+++|++++||.|.+|
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            5 SSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             SCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            445599999999999999999999999999999999999887

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=1.5e-13  Score=59.81  Aligned_cols=41  Identities=22%  Similarity=0.371  Sum_probs=38.3

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            6 SGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            45599999999999999999999999999999999999876

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.43  E-value=1.9e-13  Score=59.53  Aligned_cols=41  Identities=20%  Similarity=0.383  Sum_probs=38.2

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            6 SGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             ccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            45599999999999999999999999999999999999876

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=1.6e-13  Score=59.77  Aligned_cols=42  Identities=21%  Similarity=0.367  Sum_probs=38.7

Q ss_pred             cccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         29 ARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        29 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      ++|.++++|.|..|++.|.....|..|+++|++++||+|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            5 SSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            345599999999999999999999999999999999999876

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=1.6e-13  Score=59.77  Aligned_cols=42  Identities=21%  Similarity=0.357  Sum_probs=38.8

Q ss_pred             cccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         29 ARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        29 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      ++|.++++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            5 SSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             cCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            345599999999999999999999999999999999999876

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.43  E-value=1.7e-13  Score=59.66  Aligned_cols=41  Identities=22%  Similarity=0.392  Sum_probs=38.3

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++||+|..|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            6 SGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             ccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45599999999999999999999999999999999999876

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=2.1e-13  Score=59.37  Aligned_cols=41  Identities=17%  Similarity=0.282  Sum_probs=38.2

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            6 SGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45599999999999999999999999999999999999876

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=1.9e-13  Score=59.50  Aligned_cols=41  Identities=24%  Similarity=0.425  Sum_probs=38.3

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            6 SGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45599999999999999999999999999999999999887

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.42  E-value=1.4e-13  Score=60.00  Aligned_cols=42  Identities=17%  Similarity=0.210  Sum_probs=38.9

Q ss_pred             cccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         29 ARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        29 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      ++|.++++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            5 SSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            455699999999999999999999999999999999999876

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=1.5e-13  Score=59.79  Aligned_cols=42  Identities=19%  Similarity=0.280  Sum_probs=38.7

Q ss_pred             cccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         29 ARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        29 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      .+|.++++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            5 SSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            345599999999999999999999999999999999999876

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=1.2e-13  Score=59.55  Aligned_cols=42  Identities=17%  Similarity=0.259  Sum_probs=38.7

Q ss_pred             cccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         29 ARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        29 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      ++|.++++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            3 SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            345699999999999999999999999999999999999876

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1.5e-13  Score=59.83  Aligned_cols=41  Identities=20%  Similarity=0.281  Sum_probs=38.3

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            6 SGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44599999999999999999999999999999999999887

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1.6e-13  Score=59.83  Aligned_cols=42  Identities=24%  Similarity=0.389  Sum_probs=38.8

Q ss_pred             cccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         29 ARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        29 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      ++|.++++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            5 SSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             cCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            445599999999999999999999999999999999999876

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1.9e-13  Score=59.49  Aligned_cols=41  Identities=22%  Similarity=0.354  Sum_probs=38.2

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            6 SGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             cCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            44599999999999999999999999999999999999876

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1.6e-13  Score=59.76  Aligned_cols=41  Identities=22%  Similarity=0.378  Sum_probs=38.3

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            6 SGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            45599999999999999999999999999999999999876

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=1.4e-13  Score=59.99  Aligned_cols=42  Identities=21%  Similarity=0.291  Sum_probs=38.9

Q ss_pred             cccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         29 ARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        29 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      ++|.++++|.|..|++.|.....|..|+++|++++||+|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            5 SSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            445599999999999999999999999999999999999876

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=2.4e-13  Score=59.13  Aligned_cols=41  Identities=22%  Similarity=0.378  Sum_probs=38.2

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++||+|..|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            6 SGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44599999999999999999999999999999999999876

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=2.2e-13  Score=59.24  Aligned_cols=41  Identities=20%  Similarity=0.325  Sum_probs=38.2

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            6 SGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             SCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             ccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45599999999999999999999999999999999999876

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1.5e-13  Score=59.84  Aligned_cols=42  Identities=19%  Similarity=0.366  Sum_probs=38.5

Q ss_pred             cccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         29 ARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        29 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      ++|.++++|.|..|++.|.....|..|+++|++++||+|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            5 SSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            345599999999999999999999999999999999999876

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=1.6e-13  Score=59.75  Aligned_cols=41  Identities=22%  Similarity=0.362  Sum_probs=38.3

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++||.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            6 SGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45599999999999999999999999999999999999876

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.41  E-value=1.8e-13  Score=59.59  Aligned_cols=42  Identities=17%  Similarity=0.094  Sum_probs=38.7

Q ss_pred             cccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         29 ARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        29 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      .+|.++++|.|..|++.|.....|..|+++|++++||+|..|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            5 SSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            345599999999999999999999999999999999999876

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=1.8e-13  Score=59.57  Aligned_cols=42  Identities=26%  Similarity=0.332  Sum_probs=38.7

Q ss_pred             cccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         29 ARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        29 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      .+|.++++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            5 SSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             cccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            345599999999999999999999999999999999999876

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.41  E-value=1.9e-13  Score=59.51  Aligned_cols=42  Identities=21%  Similarity=0.435  Sum_probs=38.6

Q ss_pred             cccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         29 ARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        29 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      ++|.++++|.|..|++.|.....|..|+++|++++||+|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            5 SSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            345599999999999999999999999999999999999877

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=1.4e-13  Score=59.92  Aligned_cols=42  Identities=21%  Similarity=0.261  Sum_probs=39.0

Q ss_pred             cccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         29 ARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        29 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      ++|.++++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            5 SSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            455699999999999999999999999999999999999887

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=1.5e-13  Score=59.82  Aligned_cols=41  Identities=24%  Similarity=0.381  Sum_probs=38.3

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      +|.++++|.|..|++.|...+.|..|+++|++++||+|..|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            6 SGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            45599999999999999999999999999999999999887

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.41  E-value=1.6e-13  Score=59.70  Aligned_cols=41  Identities=22%  Similarity=0.334  Sum_probs=38.2

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      +|.++++|.|..|++.|...+.|..|+++|++++||+|..|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            6 SGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             CCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44599999999999999999999999999999999999876

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=6.1e-14  Score=61.08  Aligned_cols=41  Identities=29%  Similarity=0.397  Sum_probs=38.2

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            6 SGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             TTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34499999999999999999999999999999999999887

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=1.6e-13  Score=59.69  Aligned_cols=41  Identities=22%  Similarity=0.322  Sum_probs=38.3

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         6 ~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            6 SGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45599999999999999999999999999999999999876

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.41  E-value=1.5e-13  Score=59.58  Aligned_cols=43  Identities=26%  Similarity=0.359  Sum_probs=40.0

Q ss_pred             cccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCC
Q psy14694         29 ARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCP   71 (102)
Q Consensus        29 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~   71 (102)
                      .+|.++++|.|..|++.|.....|..|+++|+++++|.|+.||
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            3566999999999999999999999999999999999999986

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.41  E-value=1.9e-13  Score=59.54  Aligned_cols=41  Identities=20%  Similarity=0.395  Sum_probs=38.2

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++||+|..|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            6 SGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44599999999999999999999999999999999999876

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=1.7e-13  Score=59.66  Aligned_cols=42  Identities=19%  Similarity=0.354  Sum_probs=38.6

Q ss_pred             cccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         29 ARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        29 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      .+|.++++|.|..|++.|.....|..|+++|++++||+|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            5 SSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            345599999999999999999999999999999999999876

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=1.8e-13  Score=59.61  Aligned_cols=41  Identities=20%  Similarity=0.318  Sum_probs=38.3

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++||+|..|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            6 SGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45599999999999999999999999999999999999887

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=2.1e-13  Score=59.31  Aligned_cols=41  Identities=17%  Similarity=0.239  Sum_probs=38.3

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            6 SGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45599999999999999999999999999999999999876

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=6.3e-14  Score=61.08  Aligned_cols=41  Identities=17%  Similarity=0.267  Sum_probs=37.9

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++||.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            6 SGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             TTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34499999999999999999999999999999999999876

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=1.6e-13  Score=59.72  Aligned_cols=41  Identities=20%  Similarity=0.275  Sum_probs=38.3

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++||+|..|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            6 SGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             ccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45599999999999999999999999999999999999876

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=2e-13  Score=59.46  Aligned_cols=41  Identities=20%  Similarity=0.396  Sum_probs=38.2

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++||.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            6 SGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45599999999999999999999999999999999999876

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=1.7e-13  Score=59.64  Aligned_cols=42  Identities=24%  Similarity=0.377  Sum_probs=38.6

Q ss_pred             cccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         29 ARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        29 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      .+|.++++|.|..|++.|.....|..|+++|++++||.|.+|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            5 SSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             ccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            345599999999999999999999999999999999999876

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=1.8e-13  Score=59.58  Aligned_cols=41  Identities=24%  Similarity=0.385  Sum_probs=38.3

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            6 SGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45599999999999999999999999999999999999876

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=1.7e-13  Score=59.63  Aligned_cols=41  Identities=17%  Similarity=0.353  Sum_probs=38.2

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            6 SGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45599999999999999999999999999999999999876

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.7e-13  Score=59.69  Aligned_cols=41  Identities=15%  Similarity=0.263  Sum_probs=38.3

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      +|.++++|.|..|++.|...+.|..|+++|++++||+|..|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            6 SGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            45599999999999999999999999999999999999876

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.40  E-value=1.8e-13  Score=59.57  Aligned_cols=41  Identities=24%  Similarity=0.370  Sum_probs=38.2

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++||+|..|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            6 SGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45599999999999999999999999999999999999887

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.40  E-value=2.1e-13  Score=59.32  Aligned_cols=41  Identities=24%  Similarity=0.304  Sum_probs=38.2

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++||+|..|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            6 SGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             cCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45599999999999999999999999999999999999876

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.40  E-value=1.5e-13  Score=57.80  Aligned_cols=37  Identities=22%  Similarity=0.216  Sum_probs=31.7

Q ss_pred             hcCCCCccCCCCCCccCCchhhhhhhhhcCCCCcccc
Q psy14694         59 HIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRF   95 (102)
Q Consensus        59 h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C   95 (102)
                      |++++||.|..|++.|...+.|..|+++|++++||.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            4678889999999999999999999999999998876

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.39  E-value=1.8e-13  Score=60.13  Aligned_cols=43  Identities=23%  Similarity=0.345  Sum_probs=39.9

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPY   72 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~   72 (102)
                      .+.++++|.|..|++.|.....|..|+++|++++||.|.+|++
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            3458899999999999999999999999999999999999985

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=3.6e-13  Score=58.80  Aligned_cols=42  Identities=24%  Similarity=0.438  Sum_probs=38.7

Q ss_pred             cccCCCCceeCCCCCCCCCCcchHHHHhh-hhcCCCCccCCCC
Q psy14694         29 ARQSSRKKYDCFMCPYRTPYSGTMRRHIR-AHIGDRPYKCFVC   70 (102)
Q Consensus        29 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~-~h~~~~~~~c~~c   70 (102)
                      ++|.++++|.|..|++.|.....|..|++ +|++++||+|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            5 SSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            34559999999999999999999999999 9999999999876

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=2.9e-13  Score=63.34  Aligned_cols=55  Identities=18%  Similarity=0.280  Sum_probs=49.7

Q ss_pred             CccCCccccccccCHHHHHHHHhhhccccccCCCCceeCC-CCCCCCCCcchHHHHhhhhcCCCC
Q psy14694          1 ILKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCF-MCPYRTPYSGTMRRHIRAHIGDRP   64 (102)
Q Consensus         1 ~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~-~c~~~~~~~~~l~~h~~~h~~~~~   64 (102)
                      ||.|..|++.|.  ...|..|+++ .      ++++|.|. .|++.|...+.|..|+++|...++
T Consensus        10 ~~~C~~C~k~f~--~~~L~~H~~~-~------~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A           10 TQPCTYCTKEFV--FDTIQSHQYQ-C------PRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             EEECSSSCCEEE--HHHHHHHHHH-C------SSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CeeccccCCccC--HHHHHHHHHH-c------CCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            689999999996  7789999888 7      99999999 999999999999999999877654

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.39  E-value=2.4e-13  Score=63.46  Aligned_cols=41  Identities=27%  Similarity=0.314  Sum_probs=35.4

Q ss_pred             hhcCCCCccCCC--CCCccCCchhhhhhh-hhcCCCCccccccc
Q psy14694         58 AHIGDRPYKCFV--CPYRSNQRANLMSHP-LVQISDEQLRFKKI   98 (102)
Q Consensus        58 ~h~~~~~~~c~~--c~~~f~~~~~l~~h~-~~~~~~~~~~C~~c   98 (102)
                      .++|+|||+|..  |+++|.+.++|..|+ ++|++++||-|-+-
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~~   64 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAEV   64 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCSC
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccccc
Confidence            368899999965  999999999999997 68999999988653

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=6.3e-14  Score=61.06  Aligned_cols=41  Identities=24%  Similarity=0.414  Sum_probs=38.2

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            6 SGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34599999999999999999999999999999999999876

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=2.2e-13  Score=59.34  Aligned_cols=42  Identities=19%  Similarity=0.245  Sum_probs=39.1

Q ss_pred             cccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         29 ARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        29 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      ++|.++++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            456699999999999999999999999999999999999876

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.7e-13  Score=59.70  Aligned_cols=42  Identities=24%  Similarity=0.385  Sum_probs=38.7

Q ss_pred             cccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         29 ARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        29 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      .+|.++++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            5 SSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            345599999999999999999999999999999999999876

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=2.6e-13  Score=59.08  Aligned_cols=43  Identities=26%  Similarity=0.505  Sum_probs=39.4

Q ss_pred             ccccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         28 GARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        28 ~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      ..+|.++++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            3456699999999999999999999999999999999999876

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.7e-13  Score=59.69  Aligned_cols=42  Identities=21%  Similarity=0.316  Sum_probs=38.8

Q ss_pred             cccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         29 ARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        29 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      ++|.++++|.|..|++.|.....|..|+++|++++||.|.+|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            5 SSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             cCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            345599999999999999999999999999999999999877

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.38  E-value=4.1e-13  Score=63.87  Aligned_cols=53  Identities=21%  Similarity=0.545  Sum_probs=49.1

Q ss_pred             CccCC--ccccccccCHHHHHHHHhhhccccccCCCCceeCCCCCCCCCCcchHHHHhhhhc
Q psy14694          1 ILKCT--HCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHI   60 (102)
Q Consensus         1 ~~~c~--~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~   60 (102)
                      ||.|+  .|++.|. ....|..|+++|.      ++++|.|..|++.|.....|..|+++|+
T Consensus        19 ~~~C~~~~C~k~f~-~~~~l~~H~~~h~------~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           19 PYACPVESCDRRFS-RSDELTRHIRIHT------GQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CEECSSTTBCCEES-SHHHHHHHHHHHH------CCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             ccCCcCCCCCCccC-CHHHHHHHHHhhC------CCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            68896  6999999 9999999999998      9999999999999999999999998874

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.37  E-value=4.7e-15  Score=68.78  Aligned_cols=51  Identities=12%  Similarity=0.294  Sum_probs=43.5

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhhhhh
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSH   83 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h   83 (102)
                      .|.++++|.|+.|++.|.....|.   ++|++++||.|..|++.|....++..+
T Consensus         8 ~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~~~   58 (62)
T 1vd4_A            8 DSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAMPK   58 (62)
T ss_dssp             SCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCSCC
T ss_pred             HcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcccccc
Confidence            344999999999999998877775   789999999999999999987766433

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=4.4e-13  Score=58.31  Aligned_cols=41  Identities=20%  Similarity=0.326  Sum_probs=37.7

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++||.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            6 SGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45599999999999999999999999999999999999864

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=6.6e-13  Score=57.76  Aligned_cols=42  Identities=21%  Similarity=0.347  Sum_probs=38.2

Q ss_pred             cccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         29 ARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        29 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      .+|.++++|.|..|++.|.....|..|+++|++++||+|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            5 SSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            345599999999999999999999999999999999999764

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.1e-12  Score=56.09  Aligned_cols=41  Identities=22%  Similarity=0.460  Sum_probs=37.5

Q ss_pred             cccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCC
Q psy14694         29 ARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFV   69 (102)
Q Consensus        29 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~   69 (102)
                      .+|.++++|.|..|++.|.....|..|+++|++++||.|..
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            5 SSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            45569999999999999999999999999999999999863

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.5e-12  Score=56.63  Aligned_cols=41  Identities=24%  Similarity=0.414  Sum_probs=37.5

Q ss_pred             cccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCC
Q psy14694         29 ARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFV   69 (102)
Q Consensus        29 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~   69 (102)
                      ++|.++++|.|..|++.|.....|..|+++|++++||.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            5 SSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             SSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            44559999999999999999999999999999999999964

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.9e-12  Score=56.27  Aligned_cols=41  Identities=27%  Similarity=0.440  Sum_probs=37.3

Q ss_pred             cccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCC
Q psy14694         29 ARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFV   69 (102)
Q Consensus        29 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~   69 (102)
                      ++|.++++|.|..|++.|.....|..|+++|++++||+|+.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A            5 SSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             CSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             CCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            34559999999999999999999999999999999999863

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=99.32  E-value=6.1e-13  Score=55.20  Aligned_cols=36  Identities=19%  Similarity=0.354  Sum_probs=32.0

Q ss_pred             HhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCC
Q psy14694         55 HIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISD   90 (102)
Q Consensus        55 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~   90 (102)
                      |+++|++++||.|..|++.|.....|..|+++|+++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            567889999999999999999999999999998875

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=2.3e-12  Score=55.96  Aligned_cols=40  Identities=25%  Similarity=0.451  Sum_probs=36.9

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFV   69 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~   69 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++||.|..
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            6 SGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             SSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             ccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4559999999999999999999999999999999999864

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=2.2e-12  Score=56.08  Aligned_cols=41  Identities=17%  Similarity=0.237  Sum_probs=37.5

Q ss_pred             cccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCC
Q psy14694         29 ARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFV   69 (102)
Q Consensus        29 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~   69 (102)
                      ++|.++++|.|..|++.|.....|..|+++|++++||+|.+
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            5 SSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            45669999999999999999999999999999999999863

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=2.1e-12  Score=56.11  Aligned_cols=40  Identities=25%  Similarity=0.442  Sum_probs=36.9

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFV   69 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~   69 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++||+|.+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            6 SGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            4559999999999999999999999999999999999864

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=1.2e-12  Score=56.94  Aligned_cols=41  Identities=20%  Similarity=0.437  Sum_probs=37.3

Q ss_pred             cccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCC
Q psy14694         29 ARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFV   69 (102)
Q Consensus        29 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~   69 (102)
                      ++|.++++|.|..|++.|.....|..|+++|++++||+|.+
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            5 SSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             cccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            34559999999999999999999999999999999999964

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.9e-12  Score=56.21  Aligned_cols=40  Identities=23%  Similarity=0.366  Sum_probs=36.9

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFV   69 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~   69 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++||.|..
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            6 SGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            4559999999999999999999999999999999999864

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2.2e-12  Score=56.04  Aligned_cols=41  Identities=17%  Similarity=0.266  Sum_probs=37.2

Q ss_pred             cccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCC
Q psy14694         29 ARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFV   69 (102)
Q Consensus        29 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~   69 (102)
                      .+|.++++|.|..|++.|.....|..|+++|++++||+|..
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            5 SSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            34559999999999999999999999999999999999863

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.6e-12  Score=56.92  Aligned_cols=43  Identities=28%  Similarity=0.484  Sum_probs=39.1

Q ss_pred             ccccCCCCceeCC--CCCCCCCCcchHHHHhhhhcCCCCccCCCC
Q psy14694         28 GARQSSRKKYDCF--MCPYRTPYSGTMRRHIRAHIGDRPYKCFVC   70 (102)
Q Consensus        28 ~~~~~~~~~~~c~--~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c   70 (102)
                      .++|.++++|.|.  .|++.|.....|..|+++|++++||+|..|
T Consensus         4 ~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            4 GSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3456699999998  899999999999999999999999999876

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2.2e-12  Score=56.04  Aligned_cols=41  Identities=22%  Similarity=0.406  Sum_probs=37.3

Q ss_pred             cccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCC
Q psy14694         29 ARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFV   69 (102)
Q Consensus        29 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~   69 (102)
                      .+|.++++|.|..|++.|.....|..|+++|++++||.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            5 SSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            34559999999999999999999999999999999999864

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.5e-12  Score=56.62  Aligned_cols=41  Identities=22%  Similarity=0.416  Sum_probs=37.3

Q ss_pred             cccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCC
Q psy14694         29 ARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFV   69 (102)
Q Consensus        29 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~   69 (102)
                      .+|.++++|.|..|++.|.....|..|+++|++++||.|.+
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            5 SSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             cCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            34559999999999999999999999999999999999964

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2.3e-12  Score=55.97  Aligned_cols=40  Identities=23%  Similarity=0.378  Sum_probs=36.8

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFV   69 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~   69 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++||.|..
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            6 SGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            4559999999999999999999999999999999999864

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=3e-12  Score=55.56  Aligned_cols=40  Identities=23%  Similarity=0.361  Sum_probs=36.8

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFV   69 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~   69 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++||.|..
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            6 SGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             CCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4559999999999999999999999999999999999864

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.31  E-value=1.8e-12  Score=55.22  Aligned_cols=39  Identities=21%  Similarity=0.312  Sum_probs=36.1

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCF   68 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~   68 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++||.|.
T Consensus         4 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            4 GSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             SSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            455999999999999999999999999999999999984

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=4e-13  Score=55.76  Aligned_cols=36  Identities=19%  Similarity=0.295  Sum_probs=30.1

Q ss_pred             hhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCc
Q psy14694         57 RAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQ   92 (102)
Q Consensus        57 ~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~   92 (102)
                      ++|++++||.|..|++.|.....|..|+++|++++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            457788888888888888888888888888888765

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.30  E-value=1.7e-12  Score=56.40  Aligned_cols=40  Identities=23%  Similarity=0.430  Sum_probs=36.9

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFV   69 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~   69 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++||+|.+
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            6 SGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4459999999999999999999999999999999999964

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.5e-12  Score=55.87  Aligned_cols=40  Identities=25%  Similarity=0.423  Sum_probs=36.8

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFV   69 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~   69 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++||.|..
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            6 SGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             ccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4559999999999999999999999999999999999864

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.30  E-value=2.5e-12  Score=55.13  Aligned_cols=40  Identities=18%  Similarity=0.240  Sum_probs=36.8

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFV   69 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~   69 (102)
                      .|.++++|.|..|++.|.....|..|+++|++++||.|.+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            4558999999999999999999999999999999999863

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2e-12  Score=56.17  Aligned_cols=40  Identities=20%  Similarity=0.467  Sum_probs=36.9

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFV   69 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~   69 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++||.|.+
T Consensus         6 ~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            6 SGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4559999999999999999999999999999999999964

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.8e-12  Score=54.58  Aligned_cols=39  Identities=18%  Similarity=0.223  Sum_probs=35.9

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCF   68 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~   68 (102)
                      +|.++++|.|..|++.|...+.|..|+++|++++||+|.
T Consensus         4 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            4 GSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             SSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            455999999999999999999999999999999999873

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.30  E-value=1.3e-12  Score=53.39  Aligned_cols=35  Identities=23%  Similarity=0.269  Sum_probs=29.9

Q ss_pred             hhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCc
Q psy14694         58 AHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQ   92 (102)
Q Consensus        58 ~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~   92 (102)
                      +|++++||.|..|++.|...+.|..|+++|++++|
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            36788889999999999999999999999888875

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=2.2e-12  Score=55.99  Aligned_cols=40  Identities=20%  Similarity=0.333  Sum_probs=36.9

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFV   69 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~   69 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++||.|..
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            6 SGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            4559999999999999999999999999999999999864

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=3.5e-12  Score=55.37  Aligned_cols=40  Identities=20%  Similarity=0.333  Sum_probs=36.8

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFV   69 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~   69 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++||.|..
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            6 SGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             ccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4559999999999999999999999999999999999863

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=2e-12  Score=56.14  Aligned_cols=40  Identities=23%  Similarity=0.403  Sum_probs=36.9

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFV   69 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~   69 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++||.|.+
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            6 SGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            4559999999999999999999999999999999999964

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=3.9e-12  Score=54.74  Aligned_cols=40  Identities=15%  Similarity=0.184  Sum_probs=36.5

Q ss_pred             cccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCC
Q psy14694         29 ARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCF   68 (102)
Q Consensus        29 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~   68 (102)
                      .++.++++|.|..|++.|.....|..|+++|++++||+|.
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            5 SSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            3455999999999999999999999999999999999984

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=1.1e-13  Score=65.66  Aligned_cols=47  Identities=28%  Similarity=0.405  Sum_probs=42.4

Q ss_pred             cchHHHHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccccccC
Q psy14694         49 SGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKIRIAV  102 (102)
Q Consensus        49 ~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c~~~~  102 (102)
                      ...|..|+++|.+++||.|..|++.|.....|..       +++|.|+.|+++|
T Consensus         3 ~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f   49 (73)
T 2ctu_A            3 SGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDS   49 (73)
T ss_dssp             CCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTC
T ss_pred             chhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhh
Confidence            4567889999999999999999999999988876       8899999999987

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=2.5e-12  Score=54.78  Aligned_cols=39  Identities=28%  Similarity=0.527  Sum_probs=35.9

Q ss_pred             cccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccC
Q psy14694         29 ARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKC   67 (102)
Q Consensus        29 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c   67 (102)
                      .++.++++|.|..|++.|...+.|..|+++|++++||+|
T Consensus         4 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            4 GSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             cccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            345599999999999999999999999999999999987

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=2.4e-12  Score=55.87  Aligned_cols=40  Identities=25%  Similarity=0.383  Sum_probs=36.8

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFV   69 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~   69 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++||+|.+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            6 SGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            4559999999999999999999999999999999999864

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=3.4e-12  Score=54.85  Aligned_cols=39  Identities=21%  Similarity=0.234  Sum_probs=36.0

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCF   68 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~   68 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++||.|.
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            6 SGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            455999999999999999999999999999999999984

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=9.8e-14  Score=66.63  Aligned_cols=57  Identities=19%  Similarity=0.233  Sum_probs=51.5

Q ss_pred             CCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCc
Q psy14694         33 SRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQ   92 (102)
Q Consensus        33 ~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~   92 (102)
                      +++++.|..|++.|. ...|..|+ .+.+++|+.|..|++.|.. ..|..|+++|++++.
T Consensus        14 ~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~~-~~l~~H~~~c~~~~~   70 (75)
T 2d9k_A           14 PLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVLV-KDLKTHPEVCGREGS   70 (75)
T ss_dssp             CCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEET-TGGGTHHHHBTTBSS
T ss_pred             CCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCcH-HHHHHHHHHccCCcC
Confidence            899999999999995 89999999 8999999999999998874 889999999988754

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=2.8e-12  Score=55.71  Aligned_cols=41  Identities=22%  Similarity=0.396  Sum_probs=37.2

Q ss_pred             cccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCC
Q psy14694         29 ARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFV   69 (102)
Q Consensus        29 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~   69 (102)
                      ++|.++++|.|..|++.|.....|..|+++|++++||+|..
T Consensus         5 ~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            5 SSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             cccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            34559999999999999999999999999999999999863

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=2.2e-12  Score=54.71  Aligned_cols=39  Identities=26%  Similarity=0.486  Sum_probs=36.1

Q ss_pred             cccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccC
Q psy14694         29 ARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKC   67 (102)
Q Consensus        29 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c   67 (102)
                      .+|.++++|.|..|++.|.....|..|+++|++++||+|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            456699999999999999999999999999999999987

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.28  E-value=1e-13  Score=68.51  Aligned_cols=56  Identities=14%  Similarity=0.236  Sum_probs=43.6

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQIS   89 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~   89 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++||.|..|.    ....|..|++.|.|
T Consensus        19 ~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           19 PRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             SCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCCC
T ss_pred             ccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhccccc
Confidence            455888888888888888888888888888888888886653    45556677777777

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=99.28  E-value=1.9e-12  Score=53.01  Aligned_cols=35  Identities=26%  Similarity=0.449  Sum_probs=29.7

Q ss_pred             hhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCc
Q psy14694         58 AHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQ   92 (102)
Q Consensus        58 ~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~   92 (102)
                      +|++++||.|..|++.|...+.|..|+++|++++|
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            36788889999999999999999999888888765

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=2.5e-12  Score=54.74  Aligned_cols=38  Identities=29%  Similarity=0.507  Sum_probs=35.4

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKC   67 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c   67 (102)
                      ++.++++|.|..|++.|.....|..|+++|++++||.|
T Consensus         5 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            5 SSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             ccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            45599999999999999999999999999999999987

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=2.4e-12  Score=55.90  Aligned_cols=40  Identities=20%  Similarity=0.382  Sum_probs=36.9

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFV   69 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~   69 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++||.|.+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            6 SGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             SSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4559999999999999999999999999999999999864

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.28  E-value=3.9e-13  Score=66.37  Aligned_cols=46  Identities=22%  Similarity=0.294  Sum_probs=42.1

Q ss_pred             HhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccccc
Q psy14694         55 HIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKIRI  100 (102)
Q Consensus        55 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c~~  100 (102)
                      +.++|++++||.|..|++.|.....|..|+++|++++||.|..|..
T Consensus        16 ~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~   61 (88)
T 1x6f_A           16 GNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQER   61 (88)
T ss_dssp             CCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSC
T ss_pred             cccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhhh
Confidence            3567899999999999999999999999999999999999988764

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=3e-12  Score=55.62  Aligned_cols=41  Identities=15%  Similarity=0.251  Sum_probs=37.3

Q ss_pred             cccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCC
Q psy14694         29 ARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFV   69 (102)
Q Consensus        29 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~   69 (102)
                      .+|.++++|.|..|++.|.....|..|+++|++++||.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            5 SSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             SCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             cCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            34559999999999999999999999999999999999863

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=3.7e-12  Score=54.80  Aligned_cols=39  Identities=13%  Similarity=0.181  Sum_probs=36.1

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCF   68 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~   68 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++||.|.
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            6 SGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             ccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            455999999999999999999999999999999999884

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=3.9e-12  Score=54.70  Aligned_cols=40  Identities=18%  Similarity=0.330  Sum_probs=36.4

Q ss_pred             cccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCC
Q psy14694         29 ARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCF   68 (102)
Q Consensus        29 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~   68 (102)
                      .+|.++++|.|..|++.|.....|..|+++|++++||.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            5 SSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             SCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             cccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            3455999999999999999999999999999999999984

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.8e-12  Score=56.10  Aligned_cols=41  Identities=20%  Similarity=0.383  Sum_probs=37.5

Q ss_pred             cccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCC
Q psy14694         29 ARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFV   69 (102)
Q Consensus        29 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~   69 (102)
                      .+|.++++|.|..|++.|.....|..|+++|++++||.|.+
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            5 SSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            45669999999999999999999999999999999999863

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=2.2e-12  Score=54.95  Aligned_cols=39  Identities=26%  Similarity=0.461  Sum_probs=35.9

Q ss_pred             cccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccC
Q psy14694         29 ARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKC   67 (102)
Q Consensus        29 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c   67 (102)
                      .+|.++++|.|..|++.|.....|..|+++|++++||.|
T Consensus         4 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            4 GSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             cccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            345599999999999999999999999999999999987

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=3.3e-12  Score=55.45  Aligned_cols=40  Identities=23%  Similarity=0.396  Sum_probs=36.8

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFV   69 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~   69 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++||.|..
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            6 SGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4559999999999999999999999999999999999863

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=3.5e-12  Score=55.38  Aligned_cols=41  Identities=17%  Similarity=0.201  Sum_probs=37.1

Q ss_pred             cccCCCCceeCCCCCCCCCCcchHHHHhhhhcC-CCCccCCC
Q psy14694         29 ARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIG-DRPYKCFV   69 (102)
Q Consensus        29 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~-~~~~~c~~   69 (102)
                      ++|.++++|.|..|++.|.....|..|+++|++ ++||.|.+
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            5 SSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             cccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            345599999999999999999999999999999 99999863

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.27  E-value=3.1e-12  Score=54.44  Aligned_cols=39  Identities=18%  Similarity=0.269  Sum_probs=35.9

Q ss_pred             cccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccC
Q psy14694         29 ARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKC   67 (102)
Q Consensus        29 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c   67 (102)
                      .++.++++|.|..|++.|.....|..|+++|++++||.|
T Consensus         4 ~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            4 GSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             SCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             ccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            345599999999999999999999999999999999987

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.27  E-value=2.6e-13  Score=61.09  Aligned_cols=52  Identities=15%  Similarity=0.117  Sum_probs=44.6

Q ss_pred             ccccccCHHHHHHHHhhhccccccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCcc
Q psy14694          8 KVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYK   66 (102)
Q Consensus         8 ~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~   66 (102)
                      ++.|. ....|..|+++|.      ++++|.|..|++.|...+.|..|+++|+|++||.
T Consensus         3 ~k~~~-~~~~l~~h~~~H~------~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAK-HPPGTEKPRSRSQ------SEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCS-CSSCCCCCHHHHT------SSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccC-CCcchhhHHHhcC------CCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            34555 5566777888887      9999999999999999999999999999999873

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=3.7e-12  Score=54.72  Aligned_cols=39  Identities=21%  Similarity=0.330  Sum_probs=36.1

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCF   68 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~   68 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++||.|.
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            6 SGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            455999999999999999999999999999999999884

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.26  E-value=4.6e-12  Score=60.05  Aligned_cols=52  Identities=25%  Similarity=0.490  Sum_probs=47.4

Q ss_pred             CccCCc--cccccccCHHHHHHHHhhhccccccCCCCceeCCC--CCCCCCCcchHHHHhhhh
Q psy14694          1 ILKCTH--CKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFM--CPYRTPYSGTMRRHIRAH   59 (102)
Q Consensus         1 ~~~c~~--c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~--c~~~~~~~~~l~~h~~~h   59 (102)
                      +|.|..  |++.|. ....|..|+++|.      ++++|.|..  |++.|.....|..|+++|
T Consensus        17 ~~~C~~~~C~k~f~-~~~~L~~H~~~H~------~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           17 SHICSHPGCGKTYF-KSSHLKAHTRTHT------GEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CEECSSTTTCCEES-SHHHHHHHHHHHS------SSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ceeCCCCCCccccC-CHHHHHHHHHhcC------CCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            578988  999999 9999999999998      999999964  999999999999998765

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=3.8e-12  Score=55.26  Aligned_cols=40  Identities=20%  Similarity=0.306  Sum_probs=36.7

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFV   69 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~   69 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++||.|..
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yto_A            6 SGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPSS   45 (46)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTBC
T ss_pred             ccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCCC
Confidence            4459999999999999999999999999999999999863

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=2.9e-12  Score=55.11  Aligned_cols=40  Identities=15%  Similarity=0.283  Sum_probs=36.5

Q ss_pred             cccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCC
Q psy14694         29 ARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCF   68 (102)
Q Consensus        29 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~   68 (102)
                      ++|.++++|.|..|++.|.....|..|+++|.+++||+|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            5 SSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             cccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3455999999999999999999999999999999999984

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=3.7e-12  Score=55.31  Aligned_cols=40  Identities=20%  Similarity=0.339  Sum_probs=36.7

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFV   69 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~   69 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++||.|..
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            6 SGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             cCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4559999999999999999999999999999999999863

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=2.1e-13  Score=65.46  Aligned_cols=51  Identities=14%  Similarity=0.021  Sum_probs=46.3

Q ss_pred             chHHHHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccccccC
Q psy14694         50 GTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKIRIAV  102 (102)
Q Consensus        50 ~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c~~~~  102 (102)
                      ..|..|++++.+++|+.|..|++.|. ...|..|+ .+.+++|+.|+.|++.|
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~   53 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNV   53 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEE
T ss_pred             hHHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcC
Confidence            45778888999999999999999995 88999999 89999999999999864

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=5.3e-12  Score=54.75  Aligned_cols=40  Identities=20%  Similarity=0.381  Sum_probs=36.7

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFV   69 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~   69 (102)
                      +|.++++|.|..|++.|.....|..|+++|.+++||+|..
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            6 SGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             SSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4459999999999999999999999999999999999863

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=99.23  E-value=5.8e-12  Score=50.98  Aligned_cols=32  Identities=22%  Similarity=0.302  Sum_probs=26.7

Q ss_pred             CCccCCCCCCccCCchhhhhhhhhcCCCCccc
Q psy14694         63 RPYKCFVCPYRSNQRANLMSHPLVQISDEQLR   94 (102)
Q Consensus        63 ~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~   94 (102)
                      +||.|..|++.|...+.|..|+++|+++++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            47888888888888888888888888888875

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=4.9e-12  Score=54.91  Aligned_cols=39  Identities=21%  Similarity=0.407  Sum_probs=36.2

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCF   68 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~   68 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++||.|.
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            6 SGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            445999999999999999999999999999999999985

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.8e-12  Score=54.42  Aligned_cols=40  Identities=18%  Similarity=0.216  Sum_probs=36.3

Q ss_pred             cccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCC
Q psy14694         29 ARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCF   68 (102)
Q Consensus        29 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~   68 (102)
                      .+|.++++|.|..|++.|.....|..|+++|++++||.|.
T Consensus         5 ~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            5 SSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             cCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3455999999999999999999999999999999999873

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.21  E-value=4.3e-12  Score=52.88  Aligned_cols=35  Identities=20%  Similarity=0.339  Sum_probs=29.2

Q ss_pred             hcCCCCccCC--CCCCccCCchhhhhhhhhcCCCCcc
Q psy14694         59 HIGDRPYKCF--VCPYRSNQRANLMSHPLVQISDEQL   93 (102)
Q Consensus        59 h~~~~~~~c~--~c~~~f~~~~~l~~h~~~~~~~~~~   93 (102)
                      |++++||.|.  .|++.|...+.|..|+++|+++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            4678888888  5888888888888888888888877

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.4e-11  Score=52.98  Aligned_cols=39  Identities=23%  Similarity=0.337  Sum_probs=35.7

Q ss_pred             cccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccC
Q psy14694         29 ARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKC   67 (102)
Q Consensus        29 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c   67 (102)
                      .+|.++++|.|..|++.|...+.|..|+++|++++||.|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            5 SSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             cccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            345599999999999999999999999999999999876

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=1.1e-11  Score=50.95  Aligned_cols=34  Identities=18%  Similarity=0.273  Sum_probs=28.9

Q ss_pred             hhcCCCCccCCCCCCccCCchhhhhhhhhcCCCC
Q psy14694         58 AHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDE   91 (102)
Q Consensus        58 ~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~   91 (102)
                      .|++++||.|..|++.|...+.|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            4678888999999999999999999998888764

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=1.1e-11  Score=51.79  Aligned_cols=32  Identities=22%  Similarity=0.329  Sum_probs=26.9

Q ss_pred             hcCCCCccCCC--CCCccCCchhhhhhhhhcCCC
Q psy14694         59 HIGDRPYKCFV--CPYRSNQRANLMSHPLVQISD   90 (102)
Q Consensus        59 h~~~~~~~c~~--c~~~f~~~~~l~~h~~~~~~~   90 (102)
                      +++++||+|..  |+++|...+.|..|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            56788888875  888888888888888888876

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=1.1e-11  Score=50.91  Aligned_cols=34  Identities=24%  Similarity=0.612  Sum_probs=28.8

Q ss_pred             hhcCCCCccCCCCCCccCCchhhhhhhhhcCCCC
Q psy14694         58 AHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDE   91 (102)
Q Consensus        58 ~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~   91 (102)
                      .|++++||+|..|++.|.....|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            4778888999999999998888989988888764

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=7.8e-12  Score=51.75  Aligned_cols=34  Identities=18%  Similarity=0.296  Sum_probs=27.0

Q ss_pred             hhcCCCCccCCCCCCccCCc-hhhhhhhhhcCCCC
Q psy14694         58 AHIGDRPYKCFVCPYRSNQR-ANLMSHPLVQISDE   91 (102)
Q Consensus        58 ~h~~~~~~~c~~c~~~f~~~-~~l~~h~~~~~~~~   91 (102)
                      +|++++||.|..|++.|... +.|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            56778888888888888887 88888888887764

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=1.6e-11  Score=50.44  Aligned_cols=34  Identities=32%  Similarity=0.583  Sum_probs=28.4

Q ss_pred             hhcCCCCccCCCCCCccCCchhhhhhhhhcCCCC
Q psy14694         58 AHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDE   91 (102)
Q Consensus        58 ~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~   91 (102)
                      +|.+++||.|..|++.|.....|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            4778888888888888888888888888888764

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=99.15  E-value=6.4e-12  Score=50.48  Aligned_cols=31  Identities=23%  Similarity=0.328  Sum_probs=28.9

Q ss_pred             CCccCCCCCCccCCchhhhhhhhhcCCCCcc
Q psy14694         63 RPYKCFVCPYRSNQRANLMSHPLVQISDEQL   93 (102)
Q Consensus        63 ~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~   93 (102)
                      +||.|..|++.|...+.|..|+++|++++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            5799999999999999999999999999987

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=99.14  E-value=9.2e-12  Score=54.37  Aligned_cols=40  Identities=20%  Similarity=0.403  Sum_probs=33.6

Q ss_pred             HHHHhhhhcCCCCccCC--CCCCccCCchhhhhhhhhcCCCC
Q psy14694         52 MRRHIRAHIGDRPYKCF--VCPYRSNQRANLMSHPLVQISDE   91 (102)
Q Consensus        52 l~~h~~~h~~~~~~~c~--~c~~~f~~~~~l~~h~~~~~~~~   91 (102)
                      +..|...|++++||.|.  .|++.|...+.|..|+++|++++
T Consensus         6 ~~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            6 SIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            34555668999999995  79999999999999999999874

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=1e-11  Score=51.44  Aligned_cols=34  Identities=21%  Similarity=0.260  Sum_probs=28.8

Q ss_pred             hhhcCCCCccCCCCCCccCCchhhhhh-hhhcCCC
Q psy14694         57 RAHIGDRPYKCFVCPYRSNQRANLMSH-PLVQISD   90 (102)
Q Consensus        57 ~~h~~~~~~~c~~c~~~f~~~~~l~~h-~~~~~~~   90 (102)
                      ++|++++||+|..|++.|...+.|..| +++|+++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            467888899999999999999999999 8888765

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=2.9e-11  Score=49.60  Aligned_cols=34  Identities=21%  Similarity=0.388  Sum_probs=26.8

Q ss_pred             hhcCCCCccCCCCCCccCCchhhhhhhhhcCCCC
Q psy14694         58 AHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDE   91 (102)
Q Consensus        58 ~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~   91 (102)
                      .|.++++|.|..|++.|.....|..|+++|++++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            3667788888888888888888888888887764

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=99.12  E-value=1.1e-11  Score=51.11  Aligned_cols=32  Identities=13%  Similarity=0.287  Sum_probs=25.4

Q ss_pred             hcCCCCccCCCCCCccCCchhhhhhhhhcCCCCcccccc
Q psy14694         59 HIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKK   97 (102)
Q Consensus        59 h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~   97 (102)
                      +.|++||.|.+|+++|.+.++|..|+       ||.|.+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~-------py~C~~   34 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ-------AYYCSH   34 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH-------HHTSTT
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC-------CeECcC
Confidence            45788888888888888888888887       777754

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=99.12  E-value=2.4e-11  Score=53.28  Aligned_cols=35  Identities=29%  Similarity=0.578  Sum_probs=24.4

Q ss_pred             hhcCCCCccCCCCCCccCCchhhhhhhh-hcCCCCc
Q psy14694         58 AHIGDRPYKCFVCPYRSNQRANLMSHPL-VQISDEQ   92 (102)
Q Consensus        58 ~h~~~~~~~c~~c~~~f~~~~~l~~h~~-~~~~~~~   92 (102)
                      +|++++||.|..|++.|.....|..|++ +|+++.+
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            3667778888888888888888888877 7777654

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.10  E-value=9.2e-11  Score=54.81  Aligned_cols=41  Identities=22%  Similarity=0.272  Sum_probs=35.9

Q ss_pred             ccCCCCceeCCC--CCCCCCCcchHHHHh-hhhcCCCCccCCCC
Q psy14694         30 RQSSRKKYDCFM--CPYRTPYSGTMRRHI-RAHIGDRPYKCFVC   70 (102)
Q Consensus        30 ~~~~~~~~~c~~--c~~~~~~~~~l~~h~-~~h~~~~~~~c~~c   70 (102)
                      ..++++||.|..  |++.|...+.|..|+ ++|++++|+-|.+-
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~~   64 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAEV   64 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCSC
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccccc
Confidence            345899999975  999999999999997 68999999998763

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=5.1e-11  Score=48.90  Aligned_cols=34  Identities=12%  Similarity=0.286  Sum_probs=27.1

Q ss_pred             hhcCCCCccCCCCCCccCCchhhhhhhhhcCCCC
Q psy14694         58 AHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDE   91 (102)
Q Consensus        58 ~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~   91 (102)
                      .|.+++||.|..|++.|.....|..|+++|++++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            3567788888888888888888888888887764

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.08  E-value=6.7e-11  Score=49.43  Aligned_cols=36  Identities=19%  Similarity=0.355  Sum_probs=33.2

Q ss_pred             CCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccC
Q psy14694         32 SSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKC   67 (102)
Q Consensus        32 ~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c   67 (102)
                      .++++|.|..|++.|...+.|..|+++|++++||.+
T Consensus         2 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            2 WPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            478999999999999999999999999999999865

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=99.02  E-value=9.1e-11  Score=48.50  Aligned_cols=33  Identities=12%  Similarity=0.147  Sum_probs=26.0

Q ss_pred             hcCCCCccCC--CCCCccCCchhhhhhhhhcCCCC
Q psy14694         59 HIGDRPYKCF--VCPYRSNQRANLMSHPLVQISDE   91 (102)
Q Consensus        59 h~~~~~~~c~--~c~~~f~~~~~l~~h~~~~~~~~   91 (102)
                      |++++||.|.  .|++.|...+.|..|+++|++++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            5677888887  48888888888888888887764

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=2.4e-10  Score=47.08  Aligned_cols=35  Identities=20%  Similarity=0.399  Sum_probs=31.9

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRP   64 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~   64 (102)
                      +|.++++|.|..|++.|.....|..|+++|++++|
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            3 SGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            45699999999999999999999999999999875

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.97  E-value=3.3e-10  Score=45.98  Aligned_cols=34  Identities=29%  Similarity=0.425  Sum_probs=30.7

Q ss_pred             cCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCC
Q psy14694         31 QSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRP   64 (102)
Q Consensus        31 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~   64 (102)
                      |.++++|.|..|++.|.....|..|+++|++++|
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            4589999999999999999999999999998865

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.97  E-value=4.1e-10  Score=45.73  Aligned_cols=34  Identities=18%  Similarity=0.422  Sum_probs=30.9

Q ss_pred             cCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCC
Q psy14694         31 QSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRP   64 (102)
Q Consensus        31 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~   64 (102)
                      |.++++|.|..|++.|.....|..|+++|++++|
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            4589999999999999999999999999998875

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.96  E-value=3.9e-10  Score=44.02  Aligned_cols=30  Identities=23%  Similarity=0.420  Sum_probs=24.9

Q ss_pred             CCCccCCCCCCccCCchhhhhhhhhcCCCC
Q psy14694         62 DRPYKCFVCPYRSNQRANLMSHPLVQISDE   91 (102)
Q Consensus        62 ~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~   91 (102)
                      ++||.|..|++.|.....|..|+++|++++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            467888888888888888888888888764

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.95  E-value=8.5e-10  Score=43.85  Aligned_cols=30  Identities=27%  Similarity=0.484  Sum_probs=24.3

Q ss_pred             CCCccCC--CCCCccCCchhhhhhhhhcCCCC
Q psy14694         62 DRPYKCF--VCPYRSNQRANLMSHPLVQISDE   91 (102)
Q Consensus        62 ~~~~~c~--~c~~~f~~~~~l~~h~~~~~~~~   91 (102)
                      ++||.|.  .|++.|...+.|..|+++|++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            4678888  78888888888888888888764

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.95  E-value=4.7e-10  Score=52.31  Aligned_cols=32  Identities=16%  Similarity=0.172  Sum_probs=21.8

Q ss_pred             CCCCceeCCCCCCCCCCcchHHHHhhhhcCCC
Q psy14694         32 SSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDR   63 (102)
Q Consensus        32 ~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~   63 (102)
                      .++++|.|..|++.|.....|..|+++|+++.
T Consensus         9 ~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A            9 REAGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             CCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            36667777777777777777777777776653

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.94  E-value=7.3e-10  Score=44.54  Aligned_cols=32  Identities=28%  Similarity=0.378  Sum_probs=21.9

Q ss_pred             CceeCCCCCCCCCCcchHHHHhhhhcCCCCcc
Q psy14694         35 KKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYK   66 (102)
Q Consensus        35 ~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~   66 (102)
                      ++|.|..|++.|...+.|..|+++|+|++||.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            35667777777777777777777777776653

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.91  E-value=5.9e-10  Score=43.22  Aligned_cols=29  Identities=24%  Similarity=0.445  Sum_probs=23.1

Q ss_pred             CCccCCCCCCccCCchhhhhhhhhcCCCC
Q psy14694         63 RPYKCFVCPYRSNQRANLMSHPLVQISDE   91 (102)
Q Consensus        63 ~~~~c~~c~~~f~~~~~l~~h~~~~~~~~   91 (102)
                      +||.|..|++.|...+.|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            46788888888888888888888887764

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.91  E-value=1e-09  Score=43.33  Aligned_cols=29  Identities=24%  Similarity=0.543  Sum_probs=24.0

Q ss_pred             CCccCC--CCCCccCCchhhhhhhhhcCCCC
Q psy14694         63 RPYKCF--VCPYRSNQRANLMSHPLVQISDE   91 (102)
Q Consensus        63 ~~~~c~--~c~~~f~~~~~l~~h~~~~~~~~   91 (102)
                      +||.|.  .|++.|...+.|..|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            478887  88888888888888888888764

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.90  E-value=8.9e-10  Score=42.65  Aligned_cols=29  Identities=21%  Similarity=0.430  Sum_probs=22.9

Q ss_pred             CCccCCCCCCccCCchhhhhhhhhcCCCC
Q psy14694         63 RPYKCFVCPYRSNQRANLMSHPLVQISDE   91 (102)
Q Consensus        63 ~~~~c~~c~~~f~~~~~l~~h~~~~~~~~   91 (102)
                      +||.|..|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            46788888888888888888888887763

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.88  E-value=1.1e-09  Score=42.67  Aligned_cols=30  Identities=33%  Similarity=0.675  Sum_probs=22.4

Q ss_pred             CCccCCCCCCccCCchhhhhhhhhcCCCCc
Q psy14694         63 RPYKCFVCPYRSNQRANLMSHPLVQISDEQ   92 (102)
Q Consensus        63 ~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~   92 (102)
                      +||.|..|++.|...+.|..|+++|+++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            467777888888887888888777777653

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=1.6e-09  Score=44.51  Aligned_cols=34  Identities=29%  Similarity=0.496  Sum_probs=30.6

Q ss_pred             ccCCCCceeCCCCCCCCCCc-chHHHHhhhhcCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYS-GTMRRHIRAHIGDR   63 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~-~~l~~h~~~h~~~~   63 (102)
                      +|.++++|.|..|++.|... +.|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            45689999999999999999 99999999998864

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.86  E-value=2.6e-09  Score=43.79  Aligned_cols=33  Identities=18%  Similarity=0.265  Sum_probs=29.7

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGD   62 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~   62 (102)
                      ++.++++|.|..|++.|.....|..|+++|+++
T Consensus         5 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            5 GSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             TTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             cCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            445999999999999999999999999999874

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.86  E-value=9.7e-10  Score=42.47  Aligned_cols=29  Identities=34%  Similarity=0.517  Sum_probs=20.3

Q ss_pred             CCccCCCCCCccCCchhhhhhhhhcCCCC
Q psy14694         63 RPYKCFVCPYRSNQRANLMSHPLVQISDE   91 (102)
Q Consensus        63 ~~~~c~~c~~~f~~~~~l~~h~~~~~~~~   91 (102)
                      +||.|..|++.|...+.|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            46677777777777777777777776653

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.86  E-value=1.3e-09  Score=45.01  Aligned_cols=34  Identities=21%  Similarity=0.273  Sum_probs=30.9

Q ss_pred             CCCCceeCC--CCCCCCCCcchHHHHhhhhcCCCCc
Q psy14694         32 SSRKKYDCF--MCPYRTPYSGTMRRHIRAHIGDRPY   65 (102)
Q Consensus        32 ~~~~~~~c~--~c~~~~~~~~~l~~h~~~h~~~~~~   65 (102)
                      .++++|.|.  .|++.|...+.|..|+++|++++||
T Consensus         2 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            2 SDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             TTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            488999999  5999999999999999999999886

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.86  E-value=1.3e-09  Score=41.94  Aligned_cols=28  Identities=32%  Similarity=0.576  Sum_probs=23.5

Q ss_pred             CCCccCCCCCCccCCchhhhhhhhhcCC
Q psy14694         62 DRPYKCFVCPYRSNQRANLMSHPLVQIS   89 (102)
Q Consensus        62 ~~~~~c~~c~~~f~~~~~l~~h~~~~~~   89 (102)
                      ++||.|..|++.|.....|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            4688888899999988888888888764

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=98.36  E-value=2.8e-10  Score=44.26  Aligned_cols=29  Identities=21%  Similarity=0.535  Sum_probs=23.4

Q ss_pred             CCccCCCCCCccCCchhhhhhhhhcCCCC
Q psy14694         63 RPYKCFVCPYRSNQRANLMSHPLVQISDE   91 (102)
Q Consensus        63 ~~~~c~~c~~~f~~~~~l~~h~~~~~~~~   91 (102)
                      +||.|..|++.|...+.|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            46788888888888888888888887764

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=98.36  E-value=2.9e-10  Score=44.45  Aligned_cols=30  Identities=20%  Similarity=0.499  Sum_probs=24.1

Q ss_pred             CCCccCCCCCCccCCchhhhhhhhhcCCCC
Q psy14694         62 DRPYKCFVCPYRSNQRANLMSHPLVQISDE   91 (102)
Q Consensus        62 ~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~   91 (102)
                      ++||.|..|++.|.....|..|+++|++++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            367888888888888888888888887763

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.85  E-value=2.3e-09  Score=41.78  Aligned_cols=29  Identities=21%  Similarity=0.456  Sum_probs=23.3

Q ss_pred             CCccCCCCCCccCCchhhhhh-hhhcCCCC
Q psy14694         63 RPYKCFVCPYRSNQRANLMSH-PLVQISDE   91 (102)
Q Consensus        63 ~~~~c~~c~~~f~~~~~l~~h-~~~~~~~~   91 (102)
                      +||.|..|++.|...+.|..| +++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            468888888888888888888 67888764

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.84  E-value=7.3e-10  Score=42.87  Aligned_cols=29  Identities=24%  Similarity=0.438  Sum_probs=22.5

Q ss_pred             CCccCCCCCCccCCchhhhhhhhhcCCCC
Q psy14694         63 RPYKCFVCPYRSNQRANLMSHPLVQISDE   91 (102)
Q Consensus        63 ~~~~c~~c~~~f~~~~~l~~h~~~~~~~~   91 (102)
                      +||.|..|++.|.....|..|+++|++++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            46778888888888888888888877764

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=3.2e-09  Score=43.23  Aligned_cols=34  Identities=32%  Similarity=0.403  Sum_probs=30.4

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDR   63 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~   63 (102)
                      .+.++++|.|..|++.|.....|..|+++|++++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            4568999999999999999999999999998864

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=2.1e-09  Score=43.78  Aligned_cols=34  Identities=32%  Similarity=0.713  Sum_probs=30.4

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDR   63 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~   63 (102)
                      .+.++++|.|..|++.|.....|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            4568999999999999999999999999998864

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=2.2e-09  Score=43.81  Aligned_cols=34  Identities=26%  Similarity=0.369  Sum_probs=30.2

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDR   63 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~   63 (102)
                      .+.++++|.|..|++.|...+.|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            3558999999999999999999999999998764

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=2.3e-09  Score=43.73  Aligned_cols=34  Identities=26%  Similarity=0.612  Sum_probs=30.4

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDR   63 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~   63 (102)
                      .+.++++|.|..|++.|.....|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            4568999999999999999999999999998764

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=3e-09  Score=44.26  Aligned_cols=32  Identities=28%  Similarity=0.469  Sum_probs=28.9

Q ss_pred             cCCCCceeCCC--CCCCCCCcchHHHHhhhhcCC
Q psy14694         31 QSSRKKYDCFM--CPYRTPYSGTMRRHIRAHIGD   62 (102)
Q Consensus        31 ~~~~~~~~c~~--c~~~~~~~~~l~~h~~~h~~~   62 (102)
                      +.+++||.|..  |++.|...+.|..|+++|+|+
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            34899999986  999999999999999999886

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.81  E-value=3.1e-09  Score=40.39  Aligned_cols=27  Identities=26%  Similarity=0.486  Sum_probs=21.3

Q ss_pred             CccCCCCCCccCCchhhhhhhhhcCCC
Q psy14694         64 PYKCFVCPYRSNQRANLMSHPLVQISD   90 (102)
Q Consensus        64 ~~~c~~c~~~f~~~~~l~~h~~~~~~~   90 (102)
                      ||.|..|++.|.....|..|+++|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            578888888888888888888888764

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.80  E-value=2.2e-09  Score=40.96  Aligned_cols=27  Identities=26%  Similarity=0.646  Sum_probs=22.5

Q ss_pred             CCCccCCCCCCccCCchhhhhhhhhcC
Q psy14694         62 DRPYKCFVCPYRSNQRANLMSHPLVQI   88 (102)
Q Consensus        62 ~~~~~c~~c~~~f~~~~~l~~h~~~~~   88 (102)
                      ++||.|..|++.|...+.|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            468888889988888888888888774

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=5.5e-09  Score=42.53  Aligned_cols=33  Identities=24%  Similarity=0.532  Sum_probs=29.6

Q ss_pred             cCCCCceeCCCCCCCCCCcchHHHHhhhhcCCC
Q psy14694         31 QSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDR   63 (102)
Q Consensus        31 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~   63 (102)
                      +.++++|.|..|++.|.....|..|+++|++++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            458899999999999999999999999998764

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.76  E-value=1.8e-09  Score=41.26  Aligned_cols=27  Identities=22%  Similarity=0.433  Sum_probs=22.5

Q ss_pred             CCCccCCCCCCccCCchhhhhhhhhcC
Q psy14694         62 DRPYKCFVCPYRSNQRANLMSHPLVQI   88 (102)
Q Consensus        62 ~~~~~c~~c~~~f~~~~~l~~h~~~~~   88 (102)
                      ++||.|..|++.|...+.|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            468888889888888888888888774

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.68  E-value=5.8e-10  Score=44.51  Aligned_cols=31  Identities=23%  Similarity=0.401  Sum_probs=21.9

Q ss_pred             CceeCCCCCCCCCCcchHHHHhhhhcCCCCc
Q psy14694         35 KKYDCFMCPYRTPYSGTMRRHIRAHIGDRPY   65 (102)
Q Consensus        35 ~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~   65 (102)
                      ++|.|..|++.|...+.|..|+++|++++|+
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            3566777777777777777777777777665

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.68  E-value=6.8e-09  Score=45.23  Aligned_cols=34  Identities=21%  Similarity=0.447  Sum_probs=28.8

Q ss_pred             cCCCCceeCCCCCCCCCCcchHHHHhh-hhcCCCC
Q psy14694         31 QSSRKKYDCFMCPYRTPYSGTMRRHIR-AHIGDRP   64 (102)
Q Consensus        31 ~~~~~~~~c~~c~~~~~~~~~l~~h~~-~h~~~~~   64 (102)
                      |.++++|.|..|++.|.....|..|++ +|+++.+
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            458999999999999999999999999 8988754

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.68  E-value=7e-09  Score=42.58  Aligned_cols=33  Identities=30%  Similarity=0.511  Sum_probs=29.3

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHH-hhhhcCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRH-IRAHIGD   62 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h-~~~h~~~   62 (102)
                      +|.++++|.|..|++.|.....|..| +++|+++
T Consensus         3 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            3 SGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             SSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             ccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            35599999999999999999999999 8888864

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.65  E-value=1.4e-08  Score=41.62  Aligned_cols=33  Identities=27%  Similarity=0.482  Sum_probs=29.2

Q ss_pred             cCCCCceeCC--CCCCCCCCcchHHHHhhhhcCCC
Q psy14694         31 QSSRKKYDCF--MCPYRTPYSGTMRRHIRAHIGDR   63 (102)
Q Consensus        31 ~~~~~~~~c~--~c~~~~~~~~~l~~h~~~h~~~~   63 (102)
                      +.++++|.|.  .|++.|...+.|..|+++|+|++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            4589999998  49999999999999999998864

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.65  E-value=7.5e-09  Score=42.49  Aligned_cols=31  Identities=19%  Similarity=0.433  Sum_probs=27.2

Q ss_pred             CCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCC
Q psy14694         32 SSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFV   69 (102)
Q Consensus        32 ~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~   69 (102)
                      .++++|.|.+|++.|...+.|..|+       ||.|..
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~-------py~C~~   34 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ-------AYYCSH   34 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH-------HHTSTT
T ss_pred             CCccCeECCCCCCccCCHhHccCcC-------CeECcC
Confidence            4899999999999999999999998       677653

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=98.05  E-value=4e-09  Score=39.80  Aligned_cols=26  Identities=31%  Similarity=0.445  Sum_probs=20.3

Q ss_pred             CCccCCCCCCccCCchhhhhhhhhcC
Q psy14694         63 RPYKCFVCPYRSNQRANLMSHPLVQI   88 (102)
Q Consensus        63 ~~~~c~~c~~~f~~~~~l~~h~~~~~   88 (102)
                      +||.|..|++.|...+.|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            46788888888888888888877763

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.61  E-value=5.1e-08  Score=38.41  Aligned_cols=30  Identities=20%  Similarity=0.350  Sum_probs=22.5

Q ss_pred             CCceeCC--CCCCCCCCcchHHHHhhhhcCCC
Q psy14694         34 RKKYDCF--MCPYRTPYSGTMRRHIRAHIGDR   63 (102)
Q Consensus        34 ~~~~~c~--~c~~~~~~~~~l~~h~~~h~~~~   63 (102)
                      +++|.|.  .|++.|.....|..|+++|++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            3567777  78888888888888888877653

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.59  E-value=5.3e-08  Score=37.25  Aligned_cols=28  Identities=29%  Similarity=0.626  Sum_probs=19.5

Q ss_pred             CceeCCCCCCCCCCcchHHHHhhhhcCC
Q psy14694         35 KKYDCFMCPYRTPYSGTMRRHIRAHIGD   62 (102)
Q Consensus        35 ~~~~c~~c~~~~~~~~~l~~h~~~h~~~   62 (102)
                      ++|.|..|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            3566777777777777777777777665

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.58  E-value=2.8e-08  Score=38.41  Aligned_cols=28  Identities=29%  Similarity=0.470  Sum_probs=18.9

Q ss_pred             CceeCCCCCCCCCCcchHHHHhhhhcCC
Q psy14694         35 KKYDCFMCPYRTPYSGTMRRHIRAHIGD   62 (102)
Q Consensus        35 ~~~~c~~c~~~~~~~~~l~~h~~~h~~~   62 (102)
                      ++|.|..|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            4566777777777767777776666654

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.58  E-value=5.9e-08  Score=45.13  Aligned_cols=40  Identities=13%  Similarity=0.058  Sum_probs=32.8

Q ss_pred             hhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCccccccc
Q psy14694         58 AHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKI   98 (102)
Q Consensus        58 ~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c   98 (102)
                      .+.+++||.|..|++.|.....|..|+++|+++.. .+..+
T Consensus         7 ~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~-~~~~~   46 (66)
T 2epp_A            7 GLREAGILPCGLCGKVFTDANRLRQHEAQHGVTSL-QLGYI   46 (66)
T ss_dssp             SCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTSC-CCCSC
T ss_pred             CCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCcc-ccccc
Confidence            36778999999999999999999999999998743 34443

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.58  E-value=3.3e-08  Score=38.00  Aligned_cols=27  Identities=33%  Similarity=0.522  Sum_probs=16.0

Q ss_pred             ceeCCCCCCCCCCcchHHHHhhhhcCC
Q psy14694         36 KYDCFMCPYRTPYSGTMRRHIRAHIGD   62 (102)
Q Consensus        36 ~~~c~~c~~~~~~~~~l~~h~~~h~~~   62 (102)
                      +|.|..|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            455666666666666666666655554

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.57  E-value=3.6e-08  Score=42.62  Aligned_cols=33  Identities=27%  Similarity=0.596  Sum_probs=29.7

Q ss_pred             cCCCCceeCC--CCCCCCCCcchHHHHhhhhcCCC
Q psy14694         31 QSSRKKYDCF--MCPYRTPYSGTMRRHIRAHIGDR   63 (102)
Q Consensus        31 ~~~~~~~~c~--~c~~~~~~~~~l~~h~~~h~~~~   63 (102)
                      |.++++|.|.  .|++.|...+.|..|+++|+|++
T Consensus        13 H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A           13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             cCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            3499999996  79999999999999999999874

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.57  E-value=6.7e-08  Score=37.26  Aligned_cols=28  Identities=25%  Similarity=0.699  Sum_probs=17.4

Q ss_pred             ceeCCCCCCCCCCcchHHHHhhhhcCCC
Q psy14694         36 KYDCFMCPYRTPYSGTMRRHIRAHIGDR   63 (102)
Q Consensus        36 ~~~c~~c~~~~~~~~~l~~h~~~h~~~~   63 (102)
                      +|.|..|++.|...+.|..|+++|.+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            4566666666666666666666665543

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.56  E-value=5.1e-08  Score=37.38  Aligned_cols=27  Identities=22%  Similarity=0.567  Sum_probs=13.8

Q ss_pred             ceeCCCCCCCCCCcchHHHHhhhhcCC
Q psy14694         36 KYDCFMCPYRTPYSGTMRRHIRAHIGD   62 (102)
Q Consensus        36 ~~~c~~c~~~~~~~~~l~~h~~~h~~~   62 (102)
                      +|.|..|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            345555555555555555555555443

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.53  E-value=2.7e-08  Score=38.23  Aligned_cols=27  Identities=26%  Similarity=0.439  Sum_probs=21.9

Q ss_pred             CCccCC--CCCCccCCchhhhhhhhhcCC
Q psy14694         63 RPYKCF--VCPYRSNQRANLMSHPLVQIS   89 (102)
Q Consensus        63 ~~~~c~--~c~~~f~~~~~l~~h~~~~~~   89 (102)
                      +||.|.  .|++.|...+.|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            467888  888888888888888888764

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.53  E-value=6.2e-08  Score=37.91  Aligned_cols=27  Identities=33%  Similarity=0.671  Sum_probs=15.2

Q ss_pred             ceeCC--CCCCCCCCcchHHHHhhhhcCC
Q psy14694         36 KYDCF--MCPYRTPYSGTMRRHIRAHIGD   62 (102)
Q Consensus        36 ~~~c~--~c~~~~~~~~~l~~h~~~h~~~   62 (102)
                      +|.|.  .|++.|...+.|..|+++|+|+
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            45554  5555555555555555555554

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.51  E-value=4.3e-08  Score=37.58  Aligned_cols=27  Identities=33%  Similarity=0.706  Sum_probs=13.2

Q ss_pred             ceeCCCCCCCCCCcchHHHHhhhhcCC
Q psy14694         36 KYDCFMCPYRTPYSGTMRRHIRAHIGD   62 (102)
Q Consensus        36 ~~~c~~c~~~~~~~~~l~~h~~~h~~~   62 (102)
                      +|.|..|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcCC
Confidence            344555555555555555555444443

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.47  E-value=1.1e-07  Score=36.69  Aligned_cols=27  Identities=26%  Similarity=0.534  Sum_probs=17.2

Q ss_pred             ceeCCCCCCCCCCcchHHHH-hhhhcCC
Q psy14694         36 KYDCFMCPYRTPYSGTMRRH-IRAHIGD   62 (102)
Q Consensus        36 ~~~c~~c~~~~~~~~~l~~h-~~~h~~~   62 (102)
                      +|.|..|++.|...+.|..| +++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCC
Confidence            46666666666666666666 5566554

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.84  E-value=2e-08  Score=38.72  Aligned_cols=27  Identities=26%  Similarity=0.620  Sum_probs=16.7

Q ss_pred             ceeCCCCCCCCCCcchHHHHhhhhcCC
Q psy14694         36 KYDCFMCPYRTPYSGTMRRHIRAHIGD   62 (102)
Q Consensus        36 ~~~c~~c~~~~~~~~~l~~h~~~h~~~   62 (102)
                      +|.|..|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            456666666666666666666666554

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.82  E-value=2.3e-08  Score=38.73  Aligned_cols=28  Identities=36%  Similarity=0.825  Sum_probs=20.1

Q ss_pred             CceeCCCCCCCCCCcchHHHHhhhhcCC
Q psy14694         35 KKYDCFMCPYRTPYSGTMRRHIRAHIGD   62 (102)
Q Consensus        35 ~~~~c~~c~~~~~~~~~l~~h~~~h~~~   62 (102)
                      ++|.|..|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            4677777777777777777777777654

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.42  E-value=9.2e-08  Score=36.40  Aligned_cols=26  Identities=31%  Similarity=0.643  Sum_probs=15.7

Q ss_pred             CceeCCCCCCCCCCcchHHHHhhhhc
Q psy14694         35 KKYDCFMCPYRTPYSGTMRRHIRAHI   60 (102)
Q Consensus        35 ~~~~c~~c~~~~~~~~~l~~h~~~h~   60 (102)
                      ++|.|..|++.|.....|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcC
Confidence            45666666666666666666665554

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.41  E-value=2.7e-07  Score=34.68  Aligned_cols=25  Identities=16%  Similarity=0.448  Sum_probs=15.2

Q ss_pred             CccCCccccccccCHHHHHHHHhhhc
Q psy14694          1 ILKCTHCKVDLNLDTEIILQHYKLCS   26 (102)
Q Consensus         1 ~~~c~~c~~~f~~~~~~l~~h~~~~~   26 (102)
                      ||.|..|++.|. ....|..|+++|.
T Consensus         1 ~~~C~~C~k~f~-~~~~l~~H~~~h~   25 (27)
T 1znf_A            1 XYKCGLCERSFV-EKSALSRHQRVHK   25 (27)
T ss_dssp             -CBCSSSCCBCS-SHHHHHHHGGGTC
T ss_pred             CccCCCCCCcCC-CHHHHHHHHHHcC
Confidence            466666666666 6666666666553

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.34  E-value=1.7e-07  Score=35.39  Aligned_cols=25  Identities=36%  Similarity=0.862  Sum_probs=12.7

Q ss_pred             CceeCCCCCCCCCCcchHHHHhhhh
Q psy14694         35 KKYDCFMCPYRTPYSGTMRRHIRAH   59 (102)
Q Consensus        35 ~~~~c~~c~~~~~~~~~l~~h~~~h   59 (102)
                      ++|.|..|++.|...+.|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHc
Confidence            3455555555555555555555443

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.28  E-value=1.5e-07  Score=35.63  Aligned_cols=25  Identities=32%  Similarity=0.725  Sum_probs=12.8

Q ss_pred             CceeCCCCCCCCCCcchHHHHhhhh
Q psy14694         35 KKYDCFMCPYRTPYSGTMRRHIRAH   59 (102)
Q Consensus        35 ~~~~c~~c~~~~~~~~~l~~h~~~h   59 (102)
                      ++|.|..|++.|...+.|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            3455555555555555555555443

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.46  E-value=2.4e-07  Score=34.58  Aligned_cols=24  Identities=38%  Similarity=0.584  Sum_probs=12.1

Q ss_pred             ceeCCCCCCCCCCcchHHHHhhhh
Q psy14694         36 KYDCFMCPYRTPYSGTMRRHIRAH   59 (102)
Q Consensus        36 ~~~c~~c~~~~~~~~~l~~h~~~h   59 (102)
                      +|.|..|++.|...+.|..|+++|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            344555555555555555554443

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.05  E-value=1.2e-06  Score=33.32  Aligned_cols=24  Identities=25%  Similarity=0.573  Sum_probs=13.0

Q ss_pred             CccCC--ccccccccCHHHHHHHHhhh
Q psy14694          1 ILKCT--HCKVDLNLDTEIILQHYKLC   25 (102)
Q Consensus         1 ~~~c~--~c~~~f~~~~~~l~~h~~~~   25 (102)
                      ||.|.  .|++.|. ....|..|+++|
T Consensus         2 ~~~C~~~~C~k~f~-~~~~l~~H~~~H   27 (29)
T 2ab3_A            2 VYVCHFENCGRSFN-DRRKLNRHKKIH   27 (29)
T ss_dssp             CEEECSTTTCEEES-SHHHHHHHHGGG
T ss_pred             CCCCcCCcCcCccC-CHHHHHHHHHHh
Confidence            34555  5555555 555555555544

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.95  E-value=1.3e-05  Score=36.89  Aligned_cols=47  Identities=23%  Similarity=0.518  Sum_probs=31.9

Q ss_pred             CCCCCCCCcchHHHHhh-hhcCCC------CccCC--CCCCccCCchhhhhhhhhc
Q psy14694         41 MCPYRTPYSGTMRRHIR-AHIGDR------PYKCF--VCPYRSNQRANLMSHPLVQ   87 (102)
Q Consensus        41 ~c~~~~~~~~~l~~h~~-~h~~~~------~~~c~--~c~~~f~~~~~l~~h~~~~   87 (102)
                      .|++.|.....|..|+. .|.+.+      +|.|.  .|++.+.....|..|+++.
T Consensus         8 ~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            8 ECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             TCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            46666777777777763 465544      57775  7887777777788887763

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.81  E-value=2.9e-06  Score=43.98  Aligned_cols=31  Identities=19%  Similarity=0.261  Sum_probs=26.5

Q ss_pred             hhhcCCCCccCCCCCCccCCchhhhhhhhhc
Q psy14694         57 RAHIGDRPYKCFVCPYRSNQRANLMSHPLVQ   87 (102)
Q Consensus        57 ~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~   87 (102)
                      ..++|+++|.|..|++.|.+...|..|+++.
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            4578889999999999999999999988763

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.30  E-value=0.00012  Score=31.24  Aligned_cols=23  Identities=17%  Similarity=0.144  Sum_probs=13.6

Q ss_pred             CCccCCCCCCccCCchhhhhhhh
Q psy14694         63 RPYKCFVCPYRSNQRANLMSHPL   85 (102)
Q Consensus        63 ~~~~c~~c~~~f~~~~~l~~h~~   85 (102)
                      .++.|+.|+..|.....|+.|++
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            34556666666666666666655

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.22  E-value=0.00099  Score=30.48  Aligned_cols=53  Identities=13%  Similarity=0.184  Sum_probs=37.6

Q ss_pred             CccccccccCHHHHHHHHh-hhccccccCCCCceeCC--CCCCCCCCcchHHHHhhh
Q psy14694          5 THCKVDLNLDTEIILQHYK-LCSEGARQSSRKKYDCF--MCPYRTPYSGTMRRHIRA   58 (102)
Q Consensus         5 ~~c~~~f~~~~~~l~~h~~-~~~~~~~~~~~~~~~c~--~c~~~~~~~~~l~~h~~~   58 (102)
                      ..|++.|. +...|..|+. .|...........|.|.  .|+..+.....|..|++.
T Consensus         7 ~~C~~~f~-~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~   62 (64)
T 1zw8_A            7 KECPESAS-SLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINA   62 (64)
T ss_dssp             TTCCCCCS-SHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHH
T ss_pred             CCCCCcCC-CHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccc
Confidence            45999999 9999999985 55411100011378886  798888888899999875

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=97.15  E-value=0.00043  Score=37.72  Aligned_cols=59  Identities=15%  Similarity=0.064  Sum_probs=37.8

Q ss_pred             CCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCCCcc
Q psy14694         33 SRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISDEQL   93 (102)
Q Consensus        33 ~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~   93 (102)
                      ...+..|+.|+..+ ....|..|....-..++..|..|+..+.. ..+..|..+++|+.++
T Consensus       107 ~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~-~~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          107 EFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMAF-EDKEIHDQNCPLALEH  165 (170)
T ss_dssp             TTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEG-GGHHHHHTTCCC----
T ss_pred             CceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccCH-HHHHhHHHhCcChhhh
Confidence            34556777777655 44667777766666677778888776654 4567888888777664

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.80  E-value=0.00017  Score=37.39  Aligned_cols=29  Identities=17%  Similarity=0.292  Sum_probs=26.0

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhh
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRA   58 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~   58 (102)
                      .++|+++|.|..|++.|.....|..|+++
T Consensus        44 d~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           44 DLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             cCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            45588999999999999999999999874

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.61  E-value=0.004  Score=26.55  Aligned_cols=29  Identities=14%  Similarity=0.189  Sum_probs=17.7

Q ss_pred             CceeCCCCCCCCCCcchHHHHhhhhcCCC
Q psy14694         35 KKYDCFMCPYRTPYSGTMRRHIRAHIGDR   63 (102)
Q Consensus        35 ~~~~c~~c~~~~~~~~~l~~h~~~h~~~~   63 (102)
                      ..+.|+.|+..|.....|..|+..-.++.
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~HmkycCp~~   39 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYCCPEM   39 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHHCTTT
T ss_pred             CceeCCcccccccchHHHHhhhhhcCcch
Confidence            45666666666666666666666544443

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.57  E-value=0.00024  Score=37.07  Aligned_cols=28  Identities=25%  Similarity=0.216  Sum_probs=21.8

Q ss_pred             hcCCCCccCCCCCCccCCchhhhhhhhh
Q psy14694         59 HIGDRPYKCFVCPYRSNQRANLMSHPLV   86 (102)
Q Consensus        59 h~~~~~~~c~~c~~~f~~~~~l~~h~~~   86 (102)
                      +.+.+.+-|..|+..|.....+..|...
T Consensus        88 ~~~~~~~~C~~C~~~f~s~~~~~~H~~g  115 (127)
T 1zu1_A           88 DGEDRSKCCPVCNMTFSSPVVAESHYIG  115 (127)
T ss_dssp             SCCCTTTEETTTTEECSSHHHHHHHHTS
T ss_pred             cCCCCCeEcCCCCCEeCCHHHHHHHHCC
Confidence            4556678899999999988888888653

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=95.61  E-value=0.0079  Score=30.18  Aligned_cols=27  Identities=19%  Similarity=0.322  Sum_probs=16.1

Q ss_pred             CCccCCCCCCccCCchhhhhhhhhcCCCCccccccccc
Q psy14694         63 RPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKIRI  100 (102)
Q Consensus        63 ~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c~~  100 (102)
                      .|++|..||..|.           -...+|-.||.|+-
T Consensus        66 ~p~~C~~CG~~F~-----------~~~~kPsrCP~CkS   92 (105)
T 2gmg_A           66 KPAQCRKCGFVFK-----------AEINIPSRCPKCKS   92 (105)
T ss_dssp             CCCBBTTTCCBCC-----------CCSSCCSSCSSSCC
T ss_pred             ECcChhhCcCeec-----------ccCCCCCCCcCCCC
Confidence            4677777777771           12245666777753

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=95.54  E-value=0.0039  Score=29.60  Aligned_cols=49  Identities=14%  Similarity=0.196  Sum_probs=33.8

Q ss_pred             CceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhhhhhhh
Q psy14694         35 KKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPL   85 (102)
Q Consensus        35 ~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~   85 (102)
                      ..|+|..|+..+. ...+..|...-.+...+.|..|++.|.. ..++.|..
T Consensus         9 V~F~C~~Cgd~lK-K~kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~Hts   57 (79)
T 1wjv_A            9 VFFTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSHVK   57 (79)
T ss_dssp             CEEEESSSCCEEE-TTHHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTCCC
T ss_pred             eEEEcCCCCCeee-cccchhHHhhCCCCCcEEecccCCeeCC-CCEeCEee
Confidence            4578999987654 4577788654444456889999999985 44556643

>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A

Probab=94.66  E-value=0.011  Score=33.22  Aligned_cols=25  Identities=12%  Similarity=0.191  Sum_probs=16.4

Q ss_pred             CCccCCCCCCccCCchhhhhhhhhcCCCCccccccccc
Q psy14694         63 RPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKIRI  100 (102)
Q Consensus        63 ~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c~~  100 (102)
                      ..|.|..||..+.             |+.|+.||.||-
T Consensus       170 ~~~~C~~CG~i~~-------------g~~p~~CP~C~~  194 (202)
T 1yuz_A          170 KFHLCPICGYIHK-------------GEDFEKCPICFR  194 (202)
T ss_dssp             CEEECSSSCCEEE-------------SSCCSBCTTTCC
T ss_pred             cEEEECCCCCEEc-------------CcCCCCCCCCCC
Confidence            3577888875543             245678888873

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=94.35  E-value=0.021  Score=29.67  Aligned_cols=65  Identities=12%  Similarity=0.130  Sum_probs=40.5

Q ss_pred             CCceeCCCCCCCCCCcchHHHHhh--hhcCC-CCccCC------CCCCccCCchhhhhhhhhcCCCCccccccccccC
Q psy14694         34 RKKYDCFMCPYRTPYSGTMRRHIR--AHIGD-RPYKCF------VCPYRSNQRANLMSHPLVQISDEQLRFKKIRIAV  102 (102)
Q Consensus        34 ~~~~~c~~c~~~~~~~~~l~~h~~--~h~~~-~~~~c~------~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c~~~~  102 (102)
                      .+++.|..|...|.+...+..|..  .|... +.+.+.      .-++.+...    .+.....+...|.|..|++.|
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~C~~C~~~f  103 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAA----PAEISDGEDRSKCCPVCNMTF  103 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCC----SSCCSSCCCTTTEETTTTEEC
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCC----ccccccCCCCCeEcCCCCCEe
Confidence            467899999999999999999973  34211 112110      012222211    123346778889999999876

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=94.16  E-value=0.024  Score=30.80  Aligned_cols=54  Identities=15%  Similarity=0.143  Sum_probs=38.5

Q ss_pred             cCCccccccccCHHHHHHHHhhhccccccCCCCceeCCCCCCCCCCcchHHHHhhhhcCCCCc
Q psy14694          3 KCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPY   65 (102)
Q Consensus         3 ~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~   65 (102)
                      .|+.|+..+.  ...|..|.....      ..+...|..|+..+. ...+..|..+++|+.++
T Consensus       112 ~C~~C~~~~~--r~~l~~H~~~~C------~~r~~~C~~C~~~~~-~~~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          112 DCPQCQRPFQ--KFHINIHILKDC------PRRQVSCDNCAASMA-FEDKEIHDQNCPLALEH  165 (170)
T ss_dssp             ECTTTCCEEE--GGGHHHHHHHTC------TTCEEECTTTCCEEE-GGGHHHHHTTCCC----
T ss_pred             ECCCCChHHH--HHHHHHHhhhhC------CCCCeECCCCCCccC-HHHHHhHHHhCcChhhh
Confidence            5777887764  456778886655      778889999987664 47788999988887654

>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1

Probab=93.92  E-value=0.024  Score=24.13  Aligned_cols=11  Identities=45%  Similarity=1.099  Sum_probs=5.0

Q ss_pred             ccCCCCCCccC
Q psy14694         65 YKCFVCPYRSN   75 (102)
Q Consensus        65 ~~c~~c~~~f~   75 (102)
                      |+|..||..+.
T Consensus         5 y~C~vCGyvyd   15 (46)
T 6rxn_A            5 YVCNVCGYEYD   15 (46)
T ss_dssp             EEETTTCCEEC
T ss_pred             EECCCCCeEEe
Confidence            44445544443

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=93.75  E-value=0.0053  Score=29.20  Aligned_cols=13  Identities=0%  Similarity=-0.146  Sum_probs=9.5

Q ss_pred             CCccccccccccC
Q psy14694         90 DEQLRFKKIRIAV  102 (102)
Q Consensus        90 ~~~~~C~~c~~~~  102 (102)
                      +-.|+||.||..|
T Consensus        49 ~F~FkCP~CgEEF   61 (95)
T 2k5c_A           49 EFVFKCPVCGEEF   61 (95)
T ss_dssp             HSEEECTTTCCEE
T ss_pred             HHhhcCCCccHHH
Confidence            4568888888765

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=93.24  E-value=0.021  Score=27.10  Aligned_cols=46  Identities=15%  Similarity=0.366  Sum_probs=34.1

Q ss_pred             ccCCccccccccCHHHHHHHHhhhccccccCCCCceeCCCCCCCCCCcchHHHHh
Q psy14694          2 LKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHI   56 (102)
Q Consensus         2 ~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~   56 (102)
                      |.|..||..+.  ...+..|.....      +...+.|.+|+..|.. ..+..|.
T Consensus        11 F~C~~Cgd~lK--K~kv~~H~~~Cr------~~~~~SCIDC~~~F~~-~~y~~Ht   56 (79)
T 1wjv_A           11 FTCNACGESVK--KIQVEKHVSNCR------NCECLSCIDCGKDFWG-DDYKSHV   56 (79)
T ss_dssp             EEESSSCCEEE--TTHHHHHHHHCT------TCCEEEETTTTEEEEG-GGTTTCC
T ss_pred             EEcCCCCCeee--cccchhHHhhCC------CCCcEEecccCCeeCC-CCEeCEe
Confidence            67999998874  556778877665      5568999999999874 4444543

>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X

Probab=93.07  E-value=0.12  Score=21.98  Aligned_cols=12  Identities=25%  Similarity=0.326  Sum_probs=6.2

Q ss_pred             eeCCCCCCCCCC
Q psy14694         37 YDCFMCPYRTPY   48 (102)
Q Consensus        37 ~~c~~c~~~~~~   48 (102)
                      |.|..||+.|+.
T Consensus         4 Y~C~rCg~~fs~   15 (48)
T 4ayb_P            4 YRCGKCWKTFTD   15 (48)
T ss_dssp             -CCCCTTTTCCC
T ss_pred             EEeeccCCCccH
Confidence            455566655544

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=92.82  E-value=0.061  Score=25.07  Aligned_cols=51  Identities=20%  Similarity=0.349  Sum_probs=34.8

Q ss_pred             CCceeC-CCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhhhhhhhh
Q psy14694         34 RKKYDC-FMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLV   86 (102)
Q Consensus        34 ~~~~~c-~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~   86 (102)
                      ..+..| ..|+..+. ...|..|+...-..++..|..|+..+.. ..|..|...
T Consensus        14 ~~~v~C~~~C~~~v~-r~~l~~H~~~~C~~r~v~C~~C~~~~~~-~~l~~H~~~   65 (76)
T 2yuc_A           14 FNVIPCPNRCPMKLS-RRDLPAHLQHDCPKRRLKCEFCGCDFSG-EAYESHEGM   65 (76)
T ss_dssp             CSCCBCTTCCSCBCC-SSSSTTTTTTSCTTSCCCCSSSCCCCCH-HHHHHTTTS
T ss_pred             CcccCCCccccHHhh-HhHHHhhCHhhCCCcceECCCCCCccCH-HHHHHHHhH
Confidence            345667 46776654 3667777765566678889999988875 456777743

>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}

Probab=92.55  E-value=0.061  Score=27.60  Aligned_cols=24  Identities=13%  Similarity=0.133  Sum_probs=15.1

Q ss_pred             ccCCCCCCccCCchhhhhhhhhcCCCCcc-ccccccc
Q psy14694         65 YKCFVCPYRSNQRANLMSHPLVQISDEQL-RFKKIRI  100 (102)
Q Consensus        65 ~~c~~c~~~f~~~~~l~~h~~~~~~~~~~-~C~~c~~  100 (102)
                      |.|..||..|.-.            +.++ .||.||-
T Consensus        74 ~~C~~CG~~~e~~------------~~~~~~CP~Cgs   98 (119)
T 2kdx_A           74 LECKDCSHVFKPN------------ALDYGVCEKCHS   98 (119)
T ss_dssp             EECSSSSCEECSC------------CSTTCCCSSSSS
T ss_pred             EEcCCCCCEEeCC------------CCCCCcCccccC
Confidence            6777777766641            3356 6777763

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=92.09  E-value=0.15  Score=20.13  Aligned_cols=23  Identities=22%  Similarity=0.684  Sum_probs=17.7

Q ss_pred             ccCCccccccccCHHHHHHHHhhh
Q psy14694          2 LKCTHCKVDLNLDTEIILQHYKLC   25 (102)
Q Consensus         2 ~~c~~c~~~f~~~~~~l~~h~~~~   25 (102)
                      |.|+.|.+.+. +...|..|....
T Consensus         6 FiCP~C~~~l~-s~~~L~~Hye~~   28 (34)
T 3mjh_B            6 FICPQCMKSLG-SADELFKHYEAV   28 (34)
T ss_dssp             EECTTTCCEES-SHHHHHHHHHHH
T ss_pred             cCCcHHHHHcC-CHHHHHHHHHhc
Confidence            57888888887 888888777653

>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A

Probab=91.67  E-value=0.076  Score=29.08  Aligned_cols=11  Identities=36%  Similarity=1.008  Sum_probs=6.2

Q ss_pred             CccCCCCCCcc
Q psy14694         64 PYKCFVCPYRS   74 (102)
Q Consensus        64 ~~~c~~c~~~f   74 (102)
                      .|.|..||..+
T Consensus       138 ~~~C~~CG~i~  148 (170)
T 3pwf_A          138 VYICPICGYTA  148 (170)
T ss_dssp             EEECTTTCCEE
T ss_pred             eeEeCCCCCee
Confidence            45666666444

>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A

Probab=90.76  E-value=0.24  Score=21.58  Aligned_cols=11  Identities=36%  Similarity=0.948  Sum_probs=5.8

Q ss_pred             eeCCCCCCCCC
Q psy14694         37 YDCFMCPYRTP   47 (102)
Q Consensus        37 ~~c~~c~~~~~   47 (102)
                      |.|..|+..+.
T Consensus         4 y~C~~CGyvYd   14 (52)
T 1e8j_A            4 YVCTVCGYEYD   14 (52)
T ss_dssp             EECSSSCCCCC
T ss_pred             EEeCCCCeEEc
Confidence            55555555443

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=90.51  E-value=0.087  Score=25.54  Aligned_cols=28  Identities=21%  Similarity=0.457  Sum_probs=15.0

Q ss_pred             eeCCCCCCCCCCcchHHHHhhhhcCCCCccC
Q psy14694         37 YDCFMCPYRTPYSGTMRRHIRAHIGDRPYKC   67 (102)
Q Consensus        37 ~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c   67 (102)
                      ..|.+||+.|.   .|..|+..+.|..|..+
T Consensus        22 iiClecGK~fK---~LkRHL~~~hgltpeeY   49 (87)
T 2jsp_A           22 IVCLECGGSFK---SLKRHLTTHHSMTPEEY   49 (87)
T ss_dssp             EECTBTCCEES---BHHHHHHHTTCSCHHHH
T ss_pred             eEecccchhhH---HHHHHHHHccCCCHHHH
Confidence            45555665554   35566655555555444

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=89.21  E-value=0.33  Score=19.36  Aligned_cols=22  Identities=27%  Similarity=0.362  Sum_probs=11.1

Q ss_pred             ceeCCCCCCCCCCcchHHHHhh
Q psy14694         36 KYDCFMCPYRTPYSGTMRRHIR   57 (102)
Q Consensus        36 ~~~c~~c~~~~~~~~~l~~h~~   57 (102)
                      ...|..|...|.....+..|..
T Consensus         8 ~~~C~~C~IsF~~l~ty~aHKk   29 (36)
T 1fu9_A            8 KKYCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             CSEETTTTEECSSHHHHHHHHH
T ss_pred             cCeeccccceehhhHHHhhhhe
Confidence            3445555555555555555544

>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...

Probab=88.16  E-value=0.29  Score=22.75  Aligned_cols=14  Identities=29%  Similarity=0.570  Sum_probs=7.7

Q ss_pred             CCceeCCCCCCCCC
Q psy14694         34 RKKYDCFMCPYRTP   47 (102)
Q Consensus        34 ~~~~~c~~c~~~~~   47 (102)
                      ...|.|..|+..|.
T Consensus        26 ~v~Y~C~~CG~~~e   39 (70)
T 1twf_L           26 TLKYICAECSSKLS   39 (70)
T ss_dssp             CCCEECSSSCCEEC
T ss_pred             eEEEECCCCCCcce
Confidence            34456666665544

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=87.73  E-value=0.51  Score=18.23  Aligned_cols=23  Identities=22%  Similarity=0.590  Sum_probs=18.3

Q ss_pred             cCCccccccccCHHHHHHHHhhhc
Q psy14694          3 KCTHCKVDLNLDTEIILQHYKLCS   26 (102)
Q Consensus         3 ~c~~c~~~f~~~~~~l~~h~~~~~   26 (102)
                      .|..|.+.|+ +..+|..|++..+
T Consensus        11 hcrfckkkys-dvknlikhire~h   33 (37)
T 2elu_A           11 HCRFCKKKYS-DVKNLIKHIRDAH   33 (37)
T ss_dssp             EETTTTEECS-SHHHHHHHHHHTT
T ss_pred             HHHHHHHHHH-HHHHHHHHHHHhc
Confidence            4778889998 8889888887643

>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}

Probab=87.39  E-value=0.64  Score=21.10  Aligned_cols=32  Identities=22%  Similarity=0.387  Sum_probs=19.3

Q ss_pred             CCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccC
Q psy14694         33 SRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSN   75 (102)
Q Consensus        33 ~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~   75 (102)
                      ....|.|..|+..+...           ...+..|++||....
T Consensus        18 ~~v~Y~C~~Cg~~~~l~-----------~~~~iRC~~CG~RIL   49 (63)
T 3h0g_L           18 ATMIYLCADCGARNTIQ-----------AKEVIRCRECGHRVM   49 (63)
T ss_dssp             -CCCCBCSSSCCBCCCC-----------SSSCCCCSSSCCCCC
T ss_pred             CCeEEECCCCCCeeecC-----------CCCceECCCCCcEEE
Confidence            34567888887766532           124567888875443

>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...

Probab=87.30  E-value=0.087  Score=25.36  Aligned_cols=33  Identities=18%  Similarity=0.392  Sum_probs=20.3

Q ss_pred             CceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCc
Q psy14694         35 KKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQR   77 (102)
Q Consensus        35 ~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~   77 (102)
                      ..|.|+.|+.....          ..+...|.|..|+..|.-.
T Consensus        26 ~~y~Cp~CG~~~v~----------r~atGiW~C~~Cg~~~agg   58 (83)
T 1vq8_Z           26 EDHACPNCGEDRVD----------RQGTGIWQCSYCDYKFTGG   58 (83)
T ss_dssp             SCEECSSSCCEEEE----------EEETTEEEETTTCCEEECC
T ss_pred             ccCcCCCCCCccee----------ccCCCeEECCCCCCEecCC
Confidence            46888888863211          1223468888888876543

>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE] hydrogenase maturation, zinc-finger, nickel binding, metal-binding; HET: FME; 2.30A {Pyrococcus kodakaraensis} PDB: 3a44_A*

Probab=86.65  E-value=0.15  Score=26.97  Aligned_cols=13  Identities=31%  Similarity=0.700  Sum_probs=9.1

Q ss_pred             CccCCCCCCccCC
Q psy14694         64 PYKCFVCPYRSNQ   76 (102)
Q Consensus        64 ~~~c~~c~~~f~~   76 (102)
                      .+.|..||..|..
T Consensus        70 ~~~C~~CG~~~~~   82 (139)
T 3a43_A           70 VFKCRNCNYEWKL   82 (139)
T ss_dssp             EEEETTTCCEEEG
T ss_pred             cEECCCCCCEEec
Confidence            3677788877664

>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}

Probab=86.36  E-value=1  Score=21.04  Aligned_cols=32  Identities=25%  Similarity=0.609  Sum_probs=18.8

Q ss_pred             CceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCC
Q psy14694         35 KKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQ   76 (102)
Q Consensus        35 ~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~   76 (102)
                      ..|.|+.|++.-     +.   +  .+.-.|.|..|++.|.-
T Consensus        25 ~ky~C~fCgk~~-----vk---R--~a~GIW~C~~C~~~~AG   56 (72)
T 3jyw_9           25 ARYDCSFCGKKT-----VK---R--GAAGIWTCSCCKKTVAG   56 (72)
T ss_dssp             SCBCCSSCCSSC-----BS---B--CSSSCBCCSSSCCCCCC
T ss_pred             cCccCCCCCCce-----eE---e--cCCCeEECCCCCCEEeC
Confidence            457788777542     11   1  22345788888877754

>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A

Probab=86.32  E-value=0.14  Score=28.57  Aligned_cols=12  Identities=25%  Similarity=0.797  Sum_probs=6.3

Q ss_pred             CccCCCCCCccC
Q psy14694         64 PYKCFVCPYRSN   75 (102)
Q Consensus        64 ~~~c~~c~~~f~   75 (102)
                      .|.|..||..+.
T Consensus       155 ~~~C~~CG~~~~  166 (191)
T 1lko_A          155 KWRCRNCGYVHE  166 (191)
T ss_dssp             EEEETTTCCEEE
T ss_pred             eEEECCCCCEee
Confidence            355666664443

>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}

Probab=86.08  E-value=0.34  Score=23.17  Aligned_cols=10  Identities=20%  Similarity=1.075  Sum_probs=4.8

Q ss_pred             ccCCCCCCcc
Q psy14694         65 YKCFVCPYRS   74 (102)
Q Consensus        65 ~~c~~c~~~f   74 (102)
                      |+|..||..+
T Consensus        28 y~C~vCGyvY   37 (81)
T 2kn9_A           28 FRCIQCGFEY   37 (81)
T ss_dssp             EEETTTCCEE
T ss_pred             EEeCCCCEEE
Confidence            4555555443

>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}

Probab=86.06  E-value=0.29  Score=26.48  Aligned_cols=25  Identities=12%  Similarity=0.105  Sum_probs=17.0

Q ss_pred             CccCCCCCCccCCchhhhhhhhhcCCCCccccccccc
Q psy14694         64 PYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKIRI  100 (102)
Q Consensus        64 ~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c~~  100 (102)
                      .|.|..||+.|...            ...-.||.||.
T Consensus       132 ~y~C~~Cg~~~~~~------------~~~~~Cp~CG~  156 (165)
T 2lcq_A          132 RYVCIGCGRKFSTL------------PPGGVCPDCGS  156 (165)
T ss_dssp             CEEESSSCCEESSC------------CGGGBCTTTCC
T ss_pred             EEECCCCCCcccCC------------CCCCcCCCCCC
Confidence            47888999888743            21236888885

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=84.98  E-value=0.63  Score=20.36  Aligned_cols=22  Identities=18%  Similarity=0.454  Sum_probs=14.0

Q ss_pred             ccCCCCCCccCCchhhhhhhhh
Q psy14694         65 YKCFVCPYRSNQRANLMSHPLV   86 (102)
Q Consensus        65 ~~c~~c~~~f~~~~~l~~h~~~   86 (102)
                      -.|..|+..|.....++.|+.+
T Consensus        14 ~eC~lC~vkYs~r~slqDHIFs   35 (55)
T 2yrk_A           14 PECTLCGVKYSARLSIRDHIFS   35 (55)
T ss_dssp             SCCTTTTCCCCSSSCHHHHHTS
T ss_pred             ccccccCcccccccchhhhhcc
Confidence            4666677666666666666543

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=83.90  E-value=1.1  Score=16.84  Aligned_cols=21  Identities=19%  Similarity=0.494  Sum_probs=15.7

Q ss_pred             ccCCccccccccCHHHHHHHHh
Q psy14694          2 LKCTHCKVDLNLDTEIILQHYK   23 (102)
Q Consensus         2 ~~c~~c~~~f~~~~~~l~~h~~   23 (102)
                      +.|+.|..... +...++.|..
T Consensus         4 ~~CpvCk~q~P-d~kt~~~H~e   24 (28)
T 2jvx_A            4 FCCPKCQYQAP-DMDTLQIHVM   24 (28)
T ss_dssp             EECTTSSCEES-SHHHHHHHHH
T ss_pred             ccCccccccCc-ChHHHHHHHH
Confidence            56888888887 7777777754

>2czr_A TBP-interacting protein; tata-binding protein (TBP), hyperthermophilic archaeon, Zn-finger motif, transcription; 2.30A {Thermococcus kodakarensis} SCOP: c.52.4.1

Probab=82.95  E-value=0.37  Score=26.72  Aligned_cols=23  Identities=26%  Similarity=0.465  Sum_probs=15.3

Q ss_pred             ceeCCCCCCCCCCcchHHHHhhhh
Q psy14694         36 KYDCFMCPYRTPYSGTMRRHIRAH   59 (102)
Q Consensus        36 ~~~c~~c~~~~~~~~~l~~h~~~h   59 (102)
                      .|.|..|++. ....+|..|++.|
T Consensus       154 FYKCe~CgKY-vDId~~~~Hlk~H  176 (226)
T 2czr_A          154 FYKCEECGKY-VDIENLEAHLREH  176 (226)
T ss_dssp             EEECTTTCCE-EEGGGHHHHHHTT
T ss_pred             EEehhhcCce-ecHHHHHHHHHHc
Confidence            4678777763 3456777777765

>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=80.93  E-value=0.77  Score=21.65  Aligned_cols=25  Identities=16%  Similarity=0.188  Sum_probs=17.3

Q ss_pred             CccCCCCCCccC-------CchhhhhhhhhcC
Q psy14694         64 PYKCFVCPYRSN-------QRANLMSHPLVQI   88 (102)
Q Consensus        64 ~~~c~~c~~~f~-------~~~~l~~h~~~~~   88 (102)
                      -..|..|++.+.       ..++|.+|++.++
T Consensus        28 ~A~Ck~C~k~ls~g~~s~~GTS~L~rHL~~~H   59 (76)
T 2djr_A           28 YATCRLCGRQVSRGPGVNVGTTALWKHLKSMH   59 (76)
T ss_dssp             CEEESSSCCBCCCCSSCCSSSCHHHHHHHHTT
T ss_pred             EEECCCCCCccCCCCCCCCchHHHHHHHHHHC
Confidence            356777777766       3567888887754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	102
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	9e-05
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	2e-04
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	6e-04
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	0.001
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.001
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	0.002
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	0.003

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (80), Expect = 9e-05
 Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)

Query: 32 SSRKKYDCFMCPYRTPYSGTMRRHIRA-HIGDRPYKC 67
          S  K Y C  C         +  HI+  H  +RP+KC
Sbjct: 1  SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.0 bits (78), Expect = 2e-04
 Identities = 8/30 (26%), Positives = 11/30 (36%)

Query: 54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSH 83
          R        R YKC  C    +  ++L  H
Sbjct: 2  RSEWQQRERRRYKCDECGKSFSHSSDLSKH 31

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.6 bits (75), Expect = 6e-04
 Identities = 10/27 (37%), Positives = 16/27 (59%)

Query: 57 RAHIGDRPYKCFVCPYRSNQRANLMSH 83
          R H G++PY+C++C  R  Q   +  H
Sbjct: 1  RTHSGEKPYECYICHARFTQSGTMKMH 27

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.0 bits (73), Expect = 0.001
 Identities = 7/29 (24%), Positives = 13/29 (44%)

Query: 55 HIRAHIGDRPYKCFVCPYRSNQRANLMSH 83
            R   G +P++C  C    ++  +L  H
Sbjct: 2  STRGSTGIKPFQCPDCDRSFSRSDHLALH 30

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.0 bits (73), Expect = 0.001
 Identities = 10/27 (37%), Positives = 13/27 (48%)

Query: 57 RAHIGDRPYKCFVCPYRSNQRANLMSH 83
          R H G++PY C  C     Q+  L  H
Sbjct: 1  RTHTGEKPYACSHCDKTFRQKQLLDMH 27

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.4 bits (72), Expect = 0.002
 Identities = 8/25 (32%), Positives = 14/25 (56%)

Query: 59 HIGDRPYKCFVCPYRSNQRANLMSH 83
          H G++PY C  C    ++ + L+ H
Sbjct: 2  HSGEKPYGCVECGKAFSRSSILVQH 26

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 30.8 bits (70), Expect = 0.003
 Identities = 6/30 (20%), Positives = 11/30 (36%)

Query: 38 DCFMCPYRTPYSGTMRRHIRAHIGDRPYKC 67
              C     +   ++ H++ H   R Y C
Sbjct: 5  PEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	102
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.82
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.71
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.68
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.68
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.65
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.59
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.59
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.53
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.51
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.5
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.49
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.48
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.47
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.47
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.41
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.39
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.39
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.35
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.31
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.29
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.28
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.25
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.23
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.23
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.22
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.22
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.19
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.17
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.1
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.09
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.07
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.04
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.03
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.98
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.98
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.92
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.9
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.86
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.82
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.79
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.68
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.67
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.67
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.65
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.58
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.5
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.46
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.44
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	98.42
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.4
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.21
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	98.2
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.18
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.15
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.14
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	98.11
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	98.09
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	98.08
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	98.05
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.03
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.0
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.94
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.91
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.88
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.77
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.67
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.67
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.64
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.57
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.56
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.55
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.55
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.51
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.43
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.43
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.37
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.28
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.28
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	97.13
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.13
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.1
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.1
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.07
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.04
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.99
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.99
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.98
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.95
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.94
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.53
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	96.35
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.31
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.12
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	96.1
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	95.66
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.49
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.31
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.27
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	94.95
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	94.95
d1y0jb1	36	U-shaped transcription factor, different fingers {	94.87
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	94.54
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	93.73
d2gmga1	105	Hypothetical protein PF0610 {Pyrococcus furiosus [	93.35
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	92.78
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	91.93
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	90.48
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	90.23
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	89.63
d2ghfa1	58	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	88.74
d6rxna_	45	Rubredoxin {Desulfovibrio desulfuricans, strain 27	88.1
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	87.8
d1iroa_	53	Rubredoxin {Clostridium pasteurianum [TaxId: 1501]	87.65
d1lkoa2	44	Rubrerythrin, C-terminal domain {Desulfovibrio vul	87.13
d1m36a_	33	Monocytic leukemia zinc finger protein Moz {Human	86.23
d2czra1	218	TBP-interacting protein {Thermococcus kodakaraensi	85.98
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	84.24
d1jj2y_	73	Ribosomal protein L37ae {Archaeon Haloarcula maris	84.12
d2dsxa1	52	Rubredoxin {Desulfovibrio gigas [TaxId: 879]}	84.07

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=2.1e-21  Score=86.58  Aligned_cols=53  Identities=30%  Similarity=0.598  Sum_probs=49.6

Q ss_pred             CCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCCchhhhhhhhhc
Q psy14694         34 RKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQ   87 (102)
Q Consensus        34 ~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~   87 (102)
                      |++|.| .||+.|.....|..|+++|+|++||.|.+|+++|...+.|..|+++|
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            689999 59999999999999999999999999999999999999999999886

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=5.8e-18  Score=75.21  Aligned_cols=51  Identities=16%  Similarity=0.419  Sum_probs=48.7

Q ss_pred             CccCCccccccccCHHHHHHHHhhhccccccCCCCceeCCCCCCCCCCcchHHHHhhhh
Q psy14694          1 ILKCTHCKVDLNLDTEIILQHYKLCSEGARQSSRKKYDCFMCPYRTPYSGTMRRHIRAH   59 (102)
Q Consensus         1 ~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h   59 (102)
                      ||.| +||+.|. ....|..|+++|+      ++++|.|.+|++.|...+.|..|+++|
T Consensus         3 ~y~C-~Cgk~F~-~~~~l~~H~~~Ht------~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           3 LYPC-QCGKSFT-HKSQRDRHMSMHL------GLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CEEC-TTSCEES-SHHHHHHHHHHHS------CCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CCCC-CCCCeEC-CHHHhHHHhhccc------cccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            7999 5999999 9999999999999      999999999999999999999999876

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=8.3e-18  Score=69.28  Aligned_cols=37  Identities=22%  Similarity=0.357  Sum_probs=32.7

Q ss_pred             CCCCccCCCCCCccCCchhhhhhhh-hcCCCCcccccc
Q psy14694         61 GDRPYKCFVCPYRSNQRANLMSHPL-VQISDEQLRFKK   97 (102)
Q Consensus        61 ~~~~~~c~~c~~~f~~~~~l~~h~~-~~~~~~~~~C~~   97 (102)
                      .+|||+|.+||+.|...++|..|++ +|+|++||+|+.
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            4789999999999999999999975 699999999974

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=4.8e-18  Score=70.06  Aligned_cols=37  Identities=22%  Similarity=0.334  Sum_probs=34.4

Q ss_pred             HHhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCCC
Q psy14694         54 RHIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISD   90 (102)
Q Consensus        54 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~   90 (102)
                      +|+++|++++||.|.+||++|.+.++|..|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            4778899999999999999999999999999999987

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=2.9e-17  Score=65.23  Aligned_cols=33  Identities=27%  Similarity=0.615  Sum_probs=30.3

Q ss_pred             hhcCCCCccCCCCCCccCCchhhhhhhhhcCCC
Q psy14694         58 AHIGDRPYKCFVCPYRSNQRANLMSHPLVQISD   90 (102)
Q Consensus        58 ~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~   90 (102)
                      +|+|++||+|.+|+++|.+.+.|..|+++|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            588999999999999999999999999999986

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.59  E-value=2.4e-16  Score=64.46  Aligned_cols=35  Identities=20%  Similarity=0.392  Sum_probs=32.0

Q ss_pred             HhhhhcCCCCccCCCCCCccCCchhhhhhhhhcCC
Q psy14694         55 HIRAHIGDRPYKCFVCPYRSNQRANLMSHPLVQIS   89 (102)
Q Consensus        55 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~   89 (102)
                      |.++|+||+||+|.+|+++|.+.++|..|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            56889999999999999999999999999999875

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=3.1e-16  Score=63.69  Aligned_cols=34  Identities=29%  Similarity=0.454  Sum_probs=31.2

Q ss_pred             hhhcCCCCccCCCCCCccCCchhhhhhhhhcCCC
Q psy14694         57 RAHIGDRPYKCFVCPYRSNQRANLMSHPLVQISD   90 (102)
Q Consensus        57 ~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~   90 (102)
                      ++|+|++||+|.+|+++|.+.++|..|+++|+++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            5799999999999999999999999999999876

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.53  E-value=2.4e-15  Score=60.31  Aligned_cols=33  Identities=27%  Similarity=0.470  Sum_probs=29.3

Q ss_pred             hcCCCCccCCCCCCccCCchhhhhhhhhcCCCC
Q psy14694         59 HIGDRPYKCFVCPYRSNQRANLMSHPLVQISDE   91 (102)
Q Consensus        59 h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~   91 (102)
                      |+|++||+|.+|++.|.+.++|..|+++|+.+.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~~   34 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCcC
Confidence            688999999999999999999999999998763

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.51  E-value=4e-15  Score=57.38  Aligned_cols=29  Identities=21%  Similarity=0.430  Sum_probs=25.9

Q ss_pred             CCccCCCCCCccCCchhhhhhhhhcCCCC
Q psy14694         63 RPYKCFVCPYRSNQRANLMSHPLVQISDE   91 (102)
Q Consensus        63 ~~~~c~~c~~~f~~~~~l~~h~~~~~~~~   91 (102)
                      +||+|.+|+++|.+.++|..|+++|+||+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            68899999999999999999999999885

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=5.7e-15  Score=60.63  Aligned_cols=37  Identities=32%  Similarity=0.582  Sum_probs=33.1

Q ss_pred             CCCceeCCCCCCCCCCcchHHHHhh-hhcCCCCccCCC
Q psy14694         33 SRKKYDCFMCPYRTPYSGTMRRHIR-AHIGDRPYKCFV   69 (102)
Q Consensus        33 ~~~~~~c~~c~~~~~~~~~l~~h~~-~h~~~~~~~c~~   69 (102)
                      .++||.|.+|++.|...++|..|++ +|+|++||+|.+
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            5789999999999999999999975 799999999863

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=8.5e-15  Score=56.35  Aligned_cols=29  Identities=21%  Similarity=0.431  Sum_probs=24.0

Q ss_pred             CCccCCCCCCccCCchhhhhhhhhcCCCC
Q psy14694         63 RPYKCFVCPYRSNQRANLMSHPLVQISDE   91 (102)
Q Consensus        63 ~~~~c~~c~~~f~~~~~l~~h~~~~~~~~   91 (102)
                      |||.|.+|+++|.+.++|..|+++|+||+
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            57888888888888888888888888875

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.48  E-value=2.9e-15  Score=64.15  Aligned_cols=41  Identities=22%  Similarity=0.609  Sum_probs=35.7

Q ss_pred             chHHHHhhhhcCCCCccCCC--CCCccCCchhhhhhhhhcCCCC
Q psy14694         50 GTMRRHIRAHIGDRPYKCFV--CPYRSNQRANLMSHPLVQISDE   91 (102)
Q Consensus        50 ~~l~~h~~~h~~~~~~~c~~--c~~~f~~~~~l~~h~~~~~~~~   91 (102)
                      ..+..|+. |+|++||+|..  |++.|...++|..|+++|+||+
T Consensus         5 ~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           5 GSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             chhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            45566664 99999999977  9999999999999999999986

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=7.8e-15  Score=59.40  Aligned_cols=33  Identities=33%  Similarity=0.794  Sum_probs=28.0

Q ss_pred             hhhcCCCCccCCCCCCccCCchhhhhhhhhcCC
Q psy14694         57 RAHIGDRPYKCFVCPYRSNQRANLMSHPLVQIS   89 (102)
Q Consensus        57 ~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~   89 (102)
                      ++|+||+||+|..|++.|.+.++|..|++.+++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            478999999999999999999999999765443

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.47  E-value=4.7e-15  Score=56.56  Aligned_cols=28  Identities=18%  Similarity=0.527  Sum_probs=24.5

Q ss_pred             CCCccCCCCCCccCCchhhhhhhhhcCC
Q psy14694         62 DRPYKCFVCPYRSNQRANLMSHPLVQIS   89 (102)
Q Consensus        62 ~~~~~c~~c~~~f~~~~~l~~h~~~~~~   89 (102)
                      ||||+|.+|+++|.+.++|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6888999999999999999999888876

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=2.4e-14  Score=57.78  Aligned_cols=33  Identities=15%  Similarity=0.229  Sum_probs=27.3

Q ss_pred             ccCCC--CCCccCCchhhhhhhhhcCCCCcccccc
Q psy14694         65 YKCFV--CPYRSNQRANLMSHPLVQISDEQLRFKK   97 (102)
Q Consensus        65 ~~c~~--c~~~f~~~~~l~~h~~~~~~~~~~~C~~   97 (102)
                      |.|..  |+++|.+..+|.+|+++|+|++||.|+.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            56665  8888888888999988899999988863

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=8.1e-14  Score=55.08  Aligned_cols=32  Identities=31%  Similarity=0.582  Sum_probs=30.2

Q ss_pred             cCCCCceeCCCCCCCCCCcchHHHHhhhhcCC
Q psy14694         31 QSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGD   62 (102)
Q Consensus        31 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~   62 (102)
                      |++++||.|.+|++.|...+.|..|+++|+||
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            45999999999999999999999999999986

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=1.3e-13  Score=56.50  Aligned_cols=34  Identities=29%  Similarity=0.580  Sum_probs=31.2

Q ss_pred             cccCCCCceeCCCCCCCCCCcchHHHHhhhhcCC
Q psy14694         29 ARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGD   62 (102)
Q Consensus        29 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~   62 (102)
                      .+|.+++||.|.+|++.|...++|..|+++|+||
T Consensus         5 ~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           5 WQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             SCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             cccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            3455999999999999999999999999999986

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=7.4e-14  Score=51.95  Aligned_cols=26  Identities=31%  Similarity=0.736  Sum_probs=22.3

Q ss_pred             CCccCCCCCCccCCchhhhhhhhhcC
Q psy14694         63 RPYKCFVCPYRSNQRANLMSHPLVQI   88 (102)
Q Consensus        63 ~~~~c~~c~~~f~~~~~l~~h~~~~~   88 (102)
                      |||+|.+||++|.+.+.|..|+|+|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            68888889999988888888888874

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=6.6e-13  Score=51.25  Aligned_cols=28  Identities=25%  Similarity=0.470  Sum_probs=24.5

Q ss_pred             CCccCCC--CCCccCCchhhhhhhhhcCCC
Q psy14694         63 RPYKCFV--CPYRSNQRANLMSHPLVQISD   90 (102)
Q Consensus        63 ~~~~c~~--c~~~f~~~~~l~~h~~~~~~~   90 (102)
                      |||+|..  |+++|.+.++|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            5888877  999999999999999999886

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=1.6e-12  Score=49.87  Aligned_cols=29  Identities=34%  Similarity=0.695  Sum_probs=23.6

Q ss_pred             CceeCCCCCCCCCCcchHHHHhhhhcCCC
Q psy14694         35 KKYDCFMCPYRTPYSGTMRRHIRAHIGDR   63 (102)
Q Consensus        35 ~~~~c~~c~~~~~~~~~l~~h~~~h~~~~   63 (102)
                      +||.|++|++.|...+.|..|+++|+||+
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            57888888888888888888888888875

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.28  E-value=1e-12  Score=50.48  Aligned_cols=29  Identities=21%  Similarity=0.590  Sum_probs=21.1

Q ss_pred             CceeCCCCCCCCCCcchHHHHhhhhcCCC
Q psy14694         35 KKYDCFMCPYRTPYSGTMRRHIRAHIGDR   63 (102)
Q Consensus        35 ~~~~c~~c~~~~~~~~~l~~h~~~h~~~~   63 (102)
                      +||.|++|++.|...+.|..|+++|+||+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            46777777777777777777777777764

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=2e-12  Score=50.32  Aligned_cols=29  Identities=24%  Similarity=0.543  Sum_probs=24.9

Q ss_pred             CCccCC--CCCCccCCchhhhhhhhhcCCCC
Q psy14694         63 RPYKCF--VCPYRSNQRANLMSHPLVQISDE   91 (102)
Q Consensus        63 ~~~~c~--~c~~~f~~~~~l~~h~~~~~~~~   91 (102)
                      +||.|+  .|++.|.+.++|..|+++|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            588885  59999999999999999999885

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=2.1e-12  Score=52.15  Aligned_cols=33  Identities=15%  Similarity=0.276  Sum_probs=30.2

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhcCC
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGD   62 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~   62 (102)
                      +|+|++||.|.+|++.|...+.|..|+++|.++
T Consensus         2 ~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            455999999999999999999999999999865

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=9.6e-13  Score=50.86  Aligned_cols=28  Identities=29%  Similarity=0.609  Sum_probs=23.8

Q ss_pred             CCccCCC--CCCccCCchhhhhhhhhcCCC
Q psy14694         63 RPYKCFV--CPYRSNQRANLMSHPLVQISD   90 (102)
Q Consensus        63 ~~~~c~~--c~~~f~~~~~l~~h~~~~~~~   90 (102)
                      |||.|..  |+++|...++|..|+|+|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            5888876  889999888899998888886

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.22  E-value=5.2e-12  Score=51.27  Aligned_cols=33  Identities=18%  Similarity=0.288  Sum_probs=29.8

Q ss_pred             cccCCCCceeCCCCCCCCCCcchHHHHhhhhcC
Q psy14694         29 ARQSSRKKYDCFMCPYRTPYSGTMRRHIRAHIG   61 (102)
Q Consensus        29 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~   61 (102)
                      ++|++++||.|.+|++.|...+.|..|+++|.+
T Consensus         4 R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           4 RGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             STTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            445599999999999999999999999999864

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.22  E-value=1.8e-12  Score=49.26  Aligned_cols=28  Identities=32%  Similarity=0.674  Sum_probs=22.0

Q ss_pred             CCceeCCCCCCCCCCcchHHHHhhhhcC
Q psy14694         34 RKKYDCFMCPYRTPYSGTMRRHIRAHIG   61 (102)
Q Consensus        34 ~~~~~c~~c~~~~~~~~~l~~h~~~h~~   61 (102)
                      |+||.|.+|++.|...+.|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            5778888888888888888888887775

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.19  E-value=5.1e-12  Score=50.45  Aligned_cols=32  Identities=19%  Similarity=0.466  Sum_probs=29.4

Q ss_pred             cCCCCceeCCCCCCCCCCcchHHHHhhhhcCC
Q psy14694         31 QSSRKKYDCFMCPYRTPYSGTMRRHIRAHIGD   62 (102)
Q Consensus        31 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~   62 (102)
                      ++|++||.|..|++.|...++|..|+++|+.+
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            45999999999999999999999999999865

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=5.3e-12  Score=50.78  Aligned_cols=27  Identities=22%  Similarity=0.566  Sum_probs=18.8

Q ss_pred             CCCCCCCcchHHHHhhhhcCCCCccCC
Q psy14694         42 CPYRTPYSGTMRRHIRAHIGDRPYKCF   68 (102)
Q Consensus        42 c~~~~~~~~~l~~h~~~h~~~~~~~c~   68 (102)
                      |++.|...+.|..|+++|+|++||+|.
T Consensus         9 C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           9 CGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             TCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             CCCeeCChhHhccccCeeCCCCCEeCC
Confidence            667777777777777777777777664

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=2.4e-11  Score=45.04  Aligned_cols=25  Identities=16%  Similarity=0.480  Sum_probs=19.7

Q ss_pred             CccCCccccccccCHHHHHHHHhhhc
Q psy14694          1 ILKCTHCKVDLNLDTEIILQHYKLCS   26 (102)
Q Consensus         1 ~~~c~~c~~~f~~~~~~l~~h~~~~~   26 (102)
                      ||+|.+||++|. ....|..|+++|+
T Consensus         2 Py~C~eCgK~F~-~~s~L~~HqriHT   26 (26)
T d1x6ea2           2 PYKCLECGKAFS-QNSGLINHQRIHT   26 (26)
T ss_dssp             CEECSSSCCEES-SHHHHHHHHHHHH
T ss_pred             CccCCCCcCeec-cCcccccCccCCC
Confidence            778888888887 7788888887763

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.09  E-value=5e-11  Score=46.51  Aligned_cols=29  Identities=28%  Similarity=0.516  Sum_probs=24.6

Q ss_pred             CCCccCCC--CCCccCCchhhhhhhhhcCCC
Q psy14694         62 DRPYKCFV--CPYRSNQRANLMSHPLVQISD   90 (102)
Q Consensus        62 ~~~~~c~~--c~~~f~~~~~l~~h~~~~~~~   90 (102)
                      |+||.|..  |++.|.+.++|.+|+++|+..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            57888877  999999999999999988754

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.07  E-value=1.4e-11  Score=47.08  Aligned_cols=27  Identities=37%  Similarity=0.704  Sum_probs=23.2

Q ss_pred             CCccCCC--CCCccCCchhhhhhhhhcCC
Q psy14694         63 RPYKCFV--CPYRSNQRANLMSHPLVQIS   89 (102)
Q Consensus        63 ~~~~c~~--c~~~f~~~~~l~~h~~~~~~   89 (102)
                      |||+|..  |+++|...++|..|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            5888876  89999999999999998876

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=6.2e-11  Score=47.65  Aligned_cols=31  Identities=39%  Similarity=0.730  Sum_probs=27.2

Q ss_pred             ccCCCCceeCCCCCCCCCCcchHHHHhhhhc
Q psy14694         30 RQSSRKKYDCFMCPYRTPYSGTMRRHIRAHI   60 (102)
Q Consensus        30 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~   60 (102)
                      +|+|++||.|+.|++.|...++|..|++.+.
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H   32 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHILQKH   32 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHHS
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHccccc
Confidence            4569999999999999999999999976543

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.03  E-value=6e-11  Score=50.45  Aligned_cols=33  Identities=27%  Similarity=0.648  Sum_probs=30.4

Q ss_pred             cCCCCceeCCC--CCCCCCCcchHHHHhhhhcCCC
Q psy14694         31 QSSRKKYDCFM--CPYRTPYSGTMRRHIRAHIGDR   63 (102)
Q Consensus        31 ~~~~~~~~c~~--c~~~~~~~~~l~~h~~~h~~~~   63 (102)
                      +.++++|.|..  |++.|...++|..|+++|+|++
T Consensus        13 h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_          13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            33999999977  9999999999999999999986

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=1e-10  Score=44.11  Aligned_cols=26  Identities=42%  Similarity=0.690  Sum_probs=20.8

Q ss_pred             CCccCCC--CCCccCCchhhhhhhhhcC
Q psy14694         63 RPYKCFV--CPYRSNQRANLMSHPLVQI   88 (102)
Q Consensus        63 ~~~~c~~--c~~~f~~~~~l~~h~~~~~   88 (102)
                      +||.|..  |+++|.+.++|..|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            5788876  8888888888888888775

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=1.7e-10  Score=44.31  Aligned_cols=28  Identities=25%  Similarity=0.584  Sum_probs=18.3

Q ss_pred             CceeCCC--CCCCCCCcchHHHHhhhhcCC
Q psy14694         35 KKYDCFM--CPYRTPYSGTMRRHIRAHIGD   62 (102)
Q Consensus        35 ~~~~c~~--c~~~~~~~~~l~~h~~~h~~~   62 (102)
                      +||.|..  |++.|...+.|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            4566655  666666666666666666664

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.92  E-value=3.3e-10  Score=43.87  Aligned_cols=29  Identities=31%  Similarity=0.686  Sum_probs=19.1

Q ss_pred             CceeCC--CCCCCCCCcchHHHHhhhhcCCC
Q psy14694         35 KKYDCF--MCPYRTPYSGTMRRHIRAHIGDR   63 (102)
Q Consensus        35 ~~~~c~--~c~~~~~~~~~l~~h~~~h~~~~   63 (102)
                      +||.|+  .|++.|...++|..|+++|+||+
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            356664  47777777777777777777664

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.90  E-value=2.3e-10  Score=43.97  Aligned_cols=28  Identities=36%  Similarity=0.750  Sum_probs=17.1

Q ss_pred             CceeCCC--CCCCCCCcchHHHHhhhhcCC
Q psy14694         35 KKYDCFM--CPYRTPYSGTMRRHIRAHIGD   62 (102)
Q Consensus        35 ~~~~c~~--c~~~~~~~~~l~~h~~~h~~~   62 (102)
                      +||.|..  |++.|...+.|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            3556654  666666666666666666654

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.86  E-value=8e-10  Score=39.12  Aligned_cols=26  Identities=27%  Similarity=0.443  Sum_probs=20.9

Q ss_pred             CccCCCCCCccCCchhhhhhhhhcCC
Q psy14694         64 PYKCFVCPYRSNQRANLMSHPLVQIS   89 (102)
Q Consensus        64 ~~~c~~c~~~f~~~~~l~~h~~~~~~   89 (102)
                      |.+|..|++.|++...|..|+|.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            56788888888888888888888875

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.82  E-value=1.4e-09  Score=39.24  Aligned_cols=27  Identities=22%  Similarity=0.328  Sum_probs=23.5

Q ss_pred             CccCCCCCCccCCchhhhhhhhhcCCC
Q psy14694         64 PYKCFVCPYRSNQRANLMSHPLVQISD   90 (102)
Q Consensus        64 ~~~c~~c~~~f~~~~~l~~h~~~~~~~   90 (102)
                      .+.|.+||++|...+.|++|+.+|+|+
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            357889999999999999999999886

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=1.2e-09  Score=41.37  Aligned_cols=32  Identities=16%  Similarity=0.270  Sum_probs=25.0

Q ss_pred             CCccCCCCCCccCCchhhhhhhhhcCCCCccc
Q psy14694         63 RPYKCFVCPYRSNQRANLMSHPLVQISDEQLR   94 (102)
Q Consensus        63 ~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~   94 (102)
                      +...|..||+.|.....|.+|..+|+||+||.
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            34567788888888888888888888888874

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.68  E-value=6.1e-09  Score=37.96  Aligned_cols=27  Identities=15%  Similarity=0.552  Sum_probs=22.9

Q ss_pred             CCCccCCCCCCccCCchhhhhhhhhcC
Q psy14694         62 DRPYKCFVCPYRSNQRANLMSHPLVQI   88 (102)
Q Consensus        62 ~~~~~c~~c~~~f~~~~~l~~h~~~~~   88 (102)
                      |+||.|..||+.|.......+|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            578889999999988888888888875

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=6.5e-09  Score=37.62  Aligned_cols=29  Identities=38%  Similarity=0.862  Sum_probs=24.7

Q ss_pred             CCCccCCCCCCccCCchhhhhhhhhcCCC
Q psy14694         62 DRPYKCFVCPYRSNQRANLMSHPLVQISD   90 (102)
Q Consensus        62 ~~~~~c~~c~~~f~~~~~l~~h~~~~~~~   90 (102)
                      ++||+|..|.......+.|..|+|.|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            57888988888888888888898888875

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.67  E-value=1.3e-08  Score=39.44  Aligned_cols=28  Identities=21%  Similarity=0.402  Sum_probs=21.2

Q ss_pred             CCceeCCC--CCCCCCCcchHHHHhhhhcC
Q psy14694         34 RKKYDCFM--CPYRTPYSGTMRRHIRAHIG   61 (102)
Q Consensus        34 ~~~~~c~~--c~~~~~~~~~l~~h~~~h~~   61 (102)
                      |+||.|..  |++.|...++|..|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            46777766  88888888888888887764

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.65  E-value=3.4e-09  Score=40.23  Aligned_cols=26  Identities=42%  Similarity=0.797  Sum_probs=14.2

Q ss_pred             ceeCCC--CCCCCCCcchHHHHhhhhcC
Q psy14694         36 KYDCFM--CPYRTPYSGTMRRHIRAHIG   61 (102)
Q Consensus        36 ~~~c~~--c~~~~~~~~~l~~h~~~h~~   61 (102)
                      ||.|..  |++.|...+.|..|+++|+|
T Consensus         2 p~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           2 PYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CeECCCCCCCcEECchhHhhhhcCccCC
Confidence            455544  55555555555555555544

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.58  E-value=2.3e-08  Score=37.49  Aligned_cols=26  Identities=27%  Similarity=0.570  Sum_probs=19.1

Q ss_pred             CceeCCC--CCCCCCCcchHHHHhhhhc
Q psy14694         35 KKYDCFM--CPYRTPYSGTMRRHIRAHI   60 (102)
Q Consensus        35 ~~~~c~~--c~~~~~~~~~l~~h~~~h~   60 (102)
                      +||.|..  |++.|...++|..|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            4667765  7788888888888877764

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.50  E-value=4.7e-08  Score=35.51  Aligned_cols=27  Identities=22%  Similarity=0.362  Sum_probs=21.7

Q ss_pred             ccCCCCCCccCCchhhhhhhhhcCCCC
Q psy14694         65 YKCFVCPYRSNQRANLMSHPLVQISDE   91 (102)
Q Consensus        65 ~~c~~c~~~f~~~~~l~~h~~~~~~~~   91 (102)
                      |.|..|+..-..++.|+.|+|+|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            678888888888888888888888764

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.46  E-value=5.4e-08  Score=34.32  Aligned_cols=23  Identities=22%  Similarity=0.528  Sum_probs=11.3

Q ss_pred             eCCCCCCCCCCcchHHHHhhhhc
Q psy14694         38 DCFMCPYRTPYSGTMRRHIRAHI   60 (102)
Q Consensus        38 ~c~~c~~~~~~~~~l~~h~~~h~   60 (102)
                      .|+.|++.|+....|..|++.|+
T Consensus         3 kc~~c~kcfsrkdklk~hmr~ht   25 (26)
T d2dmda2           3 KCEVCGKCFSRKDKLKTHMRCHT   25 (26)
T ss_dssp             CBTTTTBCCCCHHHHHHHGGGCC
T ss_pred             ccchhhhHhcchhHHHHHhhccC
Confidence            34445555555555555554444

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.44  E-value=3.1e-08  Score=36.60  Aligned_cols=29  Identities=24%  Similarity=0.548  Sum_probs=22.1

Q ss_pred             CCCccCCCCCCccCCchhhhhhhhhcCCC
Q psy14694         62 DRPYKCFVCPYRSNQRANLMSHPLVQISD   90 (102)
Q Consensus        62 ~~~~~c~~c~~~f~~~~~l~~h~~~~~~~   90 (102)
                      |+||.|++|...|.+...+..|.|+|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            57788888888888887777777777664

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.42  E-value=1.2e-07  Score=34.62  Aligned_cols=28  Identities=29%  Similarity=0.665  Sum_probs=23.5

Q ss_pred             CCccCCCCCCccCCchhhhhhhhh-cCCC
Q psy14694         63 RPYKCFVCPYRSNQRANLMSHPLV-QISD   90 (102)
Q Consensus        63 ~~~~c~~c~~~f~~~~~l~~h~~~-~~~~   90 (102)
                      +||+|..|.......++|+.|+++ |..+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhske   29 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccccccccccccchhhhhhhhcccccC
Confidence            589999999999999999999988 4443

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.40  E-value=9.4e-08  Score=36.06  Aligned_cols=31  Identities=29%  Similarity=0.536  Sum_probs=19.0

Q ss_pred             CceeCCCCCCCCCCcchHHHHhhhhcCCCCc
Q psy14694         35 KKYDCFMCPYRTPYSGTMRRHIRAHIGDRPY   65 (102)
Q Consensus        35 ~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~   65 (102)
                      +...|..||+.|.....|.+|.-.|+||+||
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            3455666666666666666666666666665

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.21  E-value=3.8e-07  Score=32.73  Aligned_cols=24  Identities=29%  Similarity=0.441  Sum_probs=11.2

Q ss_pred             eCCCCCCCCCCcchHHHHhhhhcC
Q psy14694         38 DCFMCPYRTPYSGTMRRHIRAHIG   61 (102)
Q Consensus        38 ~c~~c~~~~~~~~~l~~h~~~h~~   61 (102)
                      .|.+||+.|..++.|.+|+-+|+|
T Consensus         4 vc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           4 VCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             ECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             hHHHHhHHHHHHHHHHHHhhcccC
Confidence            344444444444444444444444

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.20  E-value=4.9e-07  Score=31.98  Aligned_cols=26  Identities=15%  Similarity=0.272  Sum_probs=17.6

Q ss_pred             cCCCCCCccCCchhhhhhhhhcCCCC
Q psy14694         66 KCFVCPYRSNQRANLMSHPLVQISDE   91 (102)
Q Consensus        66 ~c~~c~~~f~~~~~l~~h~~~~~~~~   91 (102)
                      +|+.|.++|.....|+.|-|.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            46667777777777777777676664

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=5.2e-07  Score=32.25  Aligned_cols=26  Identities=31%  Similarity=0.729  Sum_probs=23.7

Q ss_pred             CCccCCCCCCccCCchhhhhhhhhcC
Q psy14694         63 RPYKCFVCPYRSNQRANLMSHPLVQI   88 (102)
Q Consensus        63 ~~~~c~~c~~~f~~~~~l~~h~~~~~   88 (102)
                      +|++|..|+.+-...+.|..|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            78999999999999999999999885

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.15  E-value=6.2e-07  Score=33.00  Aligned_cols=27  Identities=26%  Similarity=0.524  Sum_probs=22.5

Q ss_pred             CCccCCC--CCCccCCchhhhhhhhhcCC
Q psy14694         63 RPYKCFV--CPYRSNQRANLMSHPLVQIS   89 (102)
Q Consensus        63 ~~~~c~~--c~~~f~~~~~l~~h~~~~~~   89 (102)
                      +||.|..  |++++..++.|..|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            5788876  88999999999999987654

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.14  E-value=5.6e-07  Score=32.68  Aligned_cols=27  Identities=26%  Similarity=0.598  Sum_probs=21.8

Q ss_pred             CCceeCCCCCCCCCCcchHHHHhhhhc
Q psy14694         34 RKKYDCFMCPYRTPYSGTMRRHIRAHI   60 (102)
Q Consensus        34 ~~~~~c~~c~~~~~~~~~l~~h~~~h~   60 (102)
                      ++||.|.+||+.|..+....+|..+|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            578888888888888888888877763

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.11  E-value=6.7e-07  Score=35.54  Aligned_cols=27  Identities=30%  Similarity=0.586  Sum_probs=23.5

Q ss_pred             cCCCCccCCCCCCccCCchhhhhhhhh
Q psy14694         60 IGDRPYKCFVCPYRSNQRANLMSHPLV   86 (102)
Q Consensus        60 ~~~~~~~c~~c~~~f~~~~~l~~h~~~   86 (102)
                      +|.+||.|..|++.|.+...+.+|...
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhh
Confidence            478999999999999999999888643

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.09  E-value=1.1e-06  Score=34.59  Aligned_cols=30  Identities=27%  Similarity=0.404  Sum_probs=22.4

Q ss_pred             CCccCCCCCCccCCchhhhhhhhhcCCCCc
Q psy14694         63 RPYKCFVCPYRSNQRANLMSHPLVQISDEQ   92 (102)
Q Consensus        63 ~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~   92 (102)
                      +.|+|..|++.|.....|-.|++.|..++.
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~r~   33 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRDRA   33 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCSCT
T ss_pred             CccCCCCCCCccCCcccccchHhhhcchHH
Confidence            557788888888888888888877766543

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=98.08  E-value=1.8e-06  Score=30.03  Aligned_cols=24  Identities=29%  Similarity=0.512  Sum_probs=19.2

Q ss_pred             ccCCCCCCccCCchhhhhhhhhcC
Q psy14694         65 YKCFVCPYRSNQRANLMSHPLVQI   88 (102)
Q Consensus        65 ~~c~~c~~~f~~~~~l~~h~~~~~   88 (102)
                      |+|..|.++|...+.|.+|+++|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            567778888888888888888874

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=98.05  E-value=9.4e-07  Score=31.92  Aligned_cols=25  Identities=32%  Similarity=0.546  Sum_probs=21.3

Q ss_pred             CCccCCC--CCCccCCchhhhhhhhhc
Q psy14694         63 RPYKCFV--CPYRSNQRANLMSHPLVQ   87 (102)
Q Consensus        63 ~~~~c~~--c~~~f~~~~~l~~h~~~~   87 (102)
                      .||+|+.  |++.|+.++.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4788864  999999999999998886

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=1e-06  Score=31.73  Aligned_cols=29  Identities=34%  Similarity=0.913  Sum_probs=22.1

Q ss_pred             CCceeCCCCCCCCCCcchHHHHhhhhcCC
Q psy14694         34 RKKYDCFMCPYRTPYSGTMRRHIRAHIGD   62 (102)
Q Consensus        34 ~~~~~c~~c~~~~~~~~~l~~h~~~h~~~   62 (102)
                      ++||.|..|.+.-..++.|..|++.|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            46788888877777778888888877763

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=2.6e-06  Score=30.80  Aligned_cols=26  Identities=31%  Similarity=0.612  Sum_probs=16.2

Q ss_pred             eeCCCCCCCCCCcchHHHHhhhhcCC
Q psy14694         37 YDCFMCPYRTPYSGTMRRHIRAHIGD   62 (102)
Q Consensus        37 ~~c~~c~~~~~~~~~l~~h~~~h~~~   62 (102)
                      |.|..|+.....++.|..|++.|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            45666666666666666666666654

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.94  E-value=1.7e-06  Score=31.83  Aligned_cols=29  Identities=34%  Similarity=0.657  Sum_probs=22.8

Q ss_pred             CCceeCCCCCCCCCCcchHHHHhhhhcCC
Q psy14694         34 RKKYDCFMCPYRTPYSGTMRRHIRAHIGD   62 (102)
Q Consensus        34 ~~~~~c~~c~~~~~~~~~l~~h~~~h~~~   62 (102)
                      ++||.|++|...|.....+..|.+.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            47788888888888888888888877663

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.91  E-value=3.1e-06  Score=31.36  Aligned_cols=27  Identities=19%  Similarity=0.422  Sum_probs=19.6

Q ss_pred             CCccCCC--CCCccCCchhhhhhh-hhcCC
Q psy14694         63 RPYKCFV--CPYRSNQRANLMSHP-LVQIS   89 (102)
Q Consensus        63 ~~~~c~~--c~~~f~~~~~l~~h~-~~~~~   89 (102)
                      +||.|..  |.++|+..+....|+ |+|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            5677765  778888887777776 76654

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.88  E-value=6.7e-06  Score=28.97  Aligned_cols=26  Identities=23%  Similarity=0.475  Sum_probs=17.4

Q ss_pred             eCCCCCCCCCCcchHHHHhhhhcCCC
Q psy14694         38 DCFMCPYRTPYSGTMRRHIRAHIGDR   63 (102)
Q Consensus        38 ~c~~c~~~~~~~~~l~~h~~~h~~~~   63 (102)
                      +|+.|.+.|.+...|..|.+.|+||+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            46666677777666777766666654

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.77  E-value=7.4e-06  Score=30.34  Aligned_cols=27  Identities=26%  Similarity=0.531  Sum_probs=20.0

Q ss_pred             CccCCCCCCccCCchhhhhhhhh-cCCC
Q psy14694         64 PYKCFVCPYRSNQRANLMSHPLV-QISD   90 (102)
Q Consensus        64 ~~~c~~c~~~f~~~~~l~~h~~~-~~~~   90 (102)
                      ||.|.+|++.|.+...|-+|+.- |.|.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g~   28 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSGN   28 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcCc
Confidence            67888888888888888888443 6553

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.67  E-value=1.3e-05  Score=28.86  Aligned_cols=29  Identities=21%  Similarity=0.464  Sum_probs=22.0

Q ss_pred             CCCccCCCCCCccCCchhhhhhhhhcCCC
Q psy14694         62 DRPYKCFVCPYRSNQRANLMSHPLVQISD   90 (102)
Q Consensus        62 ~~~~~c~~c~~~f~~~~~l~~h~~~~~~~   90 (102)
                      +..|.|..|...|.+...|..|+..|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            34577788888888888888888888775

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.67  E-value=1.4e-05  Score=28.87  Aligned_cols=25  Identities=28%  Similarity=0.659  Sum_probs=21.3

Q ss_pred             CccCCCCCCccCCchhhhhhhhhcC
Q psy14694         64 PYKCFVCPYRSNQRANLMSHPLVQI   88 (102)
Q Consensus        64 ~~~c~~c~~~f~~~~~l~~h~~~~~   88 (102)
                      ||.|..|..+|....+|..|+++.+
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSKa   25 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSKA   25 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSSS
T ss_pred             CcccceeeeeEeeccchhHhhhhhh
Confidence            6889999999999999999988743

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.64  E-value=7.8e-06  Score=29.61  Aligned_cols=27  Identities=33%  Similarity=0.639  Sum_probs=21.6

Q ss_pred             CCccCCCCCCccCCchhhhhhhhhcCC
Q psy14694         63 RPYKCFVCPYRSNQRANLMSHPLVQIS   89 (102)
Q Consensus        63 ~~~~c~~c~~~f~~~~~l~~h~~~~~~   89 (102)
                      +||+|..|..--.++++|..|.+.-+|
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            588898888888888999888776444

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.57  E-value=7e-06  Score=32.54  Aligned_cols=15  Identities=0%  Similarity=-0.197  Sum_probs=13.4

Q ss_pred             CCCCccccccccccC
Q psy14694         88 ISDEQLRFKKIRIAV  102 (102)
Q Consensus        88 ~~~~~~~C~~c~~~~  102 (102)
                      +|-|||+|..|+|.|
T Consensus         1 TGiKPYeC~~C~KrF   15 (44)
T d2csha2           1 TGIKPYECNICAKRF   15 (44)
T ss_dssp             CCCCCEECSSSCCEE
T ss_pred             CCCCceeccchhhhh
Confidence            578999999999976

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.56  E-value=3.8e-05  Score=27.58  Aligned_cols=24  Identities=21%  Similarity=0.448  Sum_probs=15.3

Q ss_pred             CccCCc--cccccccCHHHHHHHHhhh
Q psy14694          1 ILKCTH--CKVDLNLDTEIILQHYKLC   25 (102)
Q Consensus         1 ~~~c~~--c~~~f~~~~~~l~~h~~~~   25 (102)
                      ||+|++  |++.|. ..+-|.+|.+.|
T Consensus         3 py~c~hegcdk~fs-~ps~lkrhekvh   28 (29)
T d2j7ja2           3 PYECPHEGCDKRFS-LPSRLKRHEKVH   28 (29)
T ss_dssp             CEECCSTTCCCEES-SHHHHHHHHHHH
T ss_pred             CccCCccCcccccc-CHHHHhhhhhcc
Confidence            566664  667776 666666666554

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.55  E-value=3.6e-05  Score=27.37  Aligned_cols=25  Identities=24%  Similarity=0.525  Sum_probs=21.0

Q ss_pred             CccCCccccccccCHHHHHHHHhhhc
Q psy14694          1 ILKCTHCKVDLNLDTEIILQHYKLCS   26 (102)
Q Consensus         1 ~~~c~~c~~~f~~~~~~l~~h~~~~~   26 (102)
                      ||+|..|.-+-. +.+.|..|+++|.
T Consensus         3 p~kck~cdyaaa-dsssl~kh~rihs   27 (28)
T d2dmda1           3 PYKCKTCDYAAA-DSSSLNKHLRIHS   27 (28)
T ss_dssp             SEECSSSCCEES-SHHHHHHHHHHSC
T ss_pred             Ccccccccchhc-chhhHhhhhhccc
Confidence            788999988887 8888888888874

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.55  E-value=3e-05  Score=27.96  Aligned_cols=24  Identities=21%  Similarity=0.405  Sum_probs=20.6

Q ss_pred             CccCCccccccccCHHHHHHHHhhh
Q psy14694          1 ILKCTHCKVDLNLDTEIILQHYKLC   25 (102)
Q Consensus         1 ~~~c~~c~~~f~~~~~~l~~h~~~~   25 (102)
                      ||.|..|+..|. ...+|..|++.-
T Consensus         1 py~C~~CnF~FK-TKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFK-TKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEES-SHHHHHHHHHSS
T ss_pred             CcccceeeeeEe-eccchhHhhhhh
Confidence            789999999998 999999888753

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.51  E-value=3.4e-05  Score=30.26  Aligned_cols=29  Identities=21%  Similarity=0.486  Sum_probs=18.1

Q ss_pred             CCceeCCCCCCCCCCcchHHHHhhhhcCC
Q psy14694         34 RKKYDCFMCPYRTPYSGTMRRHIRAHIGD   62 (102)
Q Consensus        34 ~~~~~c~~c~~~~~~~~~l~~h~~~h~~~   62 (102)
                      .+.|.|..|++.|.+..+|--|++.|..+
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~   31 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRD   31 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCS
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcch
Confidence            34566666666666666666666666443

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.43  E-value=5.5e-05  Score=26.14  Aligned_cols=22  Identities=18%  Similarity=0.421  Sum_probs=18.9

Q ss_pred             CccCCccccccccCHHHHHHHHh
Q psy14694          1 ILKCTHCKVDLNLDTEIILQHYK   23 (102)
Q Consensus         1 ~~~c~~c~~~f~~~~~~l~~h~~   23 (102)
                      ||+|..|...|. ....|+.|+.
T Consensus         2 pykcsscsqqfm-qkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFM-QKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEES-SHHHHHHHHH
T ss_pred             CCcccHHHHHHH-HHHHHHHHHH
Confidence            789999999998 8888888864

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.43  E-value=3.4e-05  Score=26.68  Aligned_cols=23  Identities=39%  Similarity=0.726  Sum_probs=20.1

Q ss_pred             CCccCCCCCCccCCchhhhhhhh
Q psy14694         63 RPYKCFVCPYRSNQRANLMSHPL   85 (102)
Q Consensus        63 ~~~~c~~c~~~f~~~~~l~~h~~   85 (102)
                      .||+|..|...|.+...|+.|+-
T Consensus         1 mpykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           1 MPYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHH
T ss_pred             CCCcccHHHHHHHHHHHHHHHHH
Confidence            37999999999999999998853

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.37  E-value=3.6e-05  Score=27.80  Aligned_cols=20  Identities=25%  Similarity=0.368  Sum_probs=10.8

Q ss_pred             CCCCCCCcchHHHHhhhhcC
Q psy14694         42 CPYRTPYSGTMRRHIRAHIG   61 (102)
Q Consensus        42 c~~~~~~~~~l~~h~~~h~~   61 (102)
                      |.+.|.....|.+|.-+|+|
T Consensus        10 c~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2          10 CEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             CCCEESSTTHHHHHHHHHHT
T ss_pred             ccccchhhhhhhhhhccccC
Confidence            55555555555555555554

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.28  E-value=9.8e-05  Score=26.61  Aligned_cols=27  Identities=22%  Similarity=0.491  Sum_probs=14.2

Q ss_pred             CccCCC--CCCccCCchhhhhhhhhcCCC
Q psy14694         64 PYKCFV--CPYRSNQRANLMSHPLVQISD   90 (102)
Q Consensus        64 ~~~c~~--c~~~f~~~~~l~~h~~~~~~~   90 (102)
                      ||.|.+  |.+.|..--.|.+|..+|+|+
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CcCcccccccccchhhhhhhhhhccccCC
Confidence            444433  555555555555555555543

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.28  E-value=0.00018  Score=24.81  Aligned_cols=23  Identities=17%  Similarity=0.502  Sum_probs=12.0

Q ss_pred             ccCCccccccccCHHHHHHHHhhh
Q psy14694          2 LKCTHCKVDLNLDTEIILQHYKLC   25 (102)
Q Consensus         2 ~~c~~c~~~f~~~~~~l~~h~~~~   25 (102)
                      |+|..|.+.|. ..+.|.+|++.|
T Consensus         1 ykcglcersfv-eksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFV-EKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCS-SHHHHHHHGGGT
T ss_pred             CcccchHHHHH-HHHHHHHHHHhh
Confidence            44555555555 555555555543

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.13  E-value=0.00013  Score=27.56  Aligned_cols=26  Identities=15%  Similarity=0.278  Sum_probs=22.0

Q ss_pred             CccCCCCCCccCCchhhhhhhhhcCC
Q psy14694         64 PYKCFVCPYRSNQRANLMSHPLVQIS   89 (102)
Q Consensus        64 ~~~c~~c~~~f~~~~~l~~h~~~~~~   89 (102)
                      .|.|.+|+++|.+...+.+|....+|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            47899999999999888888877665

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.13  E-value=0.00042  Score=24.43  Aligned_cols=23  Identities=22%  Similarity=0.364  Sum_probs=15.5

Q ss_pred             CccCCccccccccCHHHHHHHHhh
Q psy14694          1 ILKCTHCKVDLNLDTEIILQHYKL   24 (102)
Q Consensus         1 ~~~c~~c~~~f~~~~~~l~~h~~~   24 (102)
                      ||.|..||+.+- ..++|..|...
T Consensus         1 pf~c~kcgkcyf-rkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYF-RKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCS-SHHHHHHHHHH
T ss_pred             CCccccchhhhh-hHhHHHHHHHH
Confidence            677777777766 66777666543

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.10  E-value=9.1e-05  Score=28.21  Aligned_cols=19  Identities=11%  Similarity=0.001  Sum_probs=10.2

Q ss_pred             CccCCchhhhhhhhhcCCC
Q psy14694         72 YRSNQRANLMSHPLVQISD   90 (102)
Q Consensus        72 ~~f~~~~~l~~h~~~~~~~   90 (102)
                      +.|.....|..|+|+|+||
T Consensus        15 ~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          15 RPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCSSHHHHHHHTHHHHCC
T ss_pred             CcchhHHHHHHHHhhcCCC
Confidence            3455555555555555554

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.10  E-value=0.00042  Score=24.97  Aligned_cols=23  Identities=22%  Similarity=0.462  Sum_probs=12.7

Q ss_pred             CccCCccccccccCHHHHHHHHhh
Q psy14694          1 ILKCTHCKVDLNLDTEIILQHYKL   24 (102)
Q Consensus         1 ~~~c~~c~~~f~~~~~~l~~h~~~   24 (102)
                      ||.|..|..... +.++|..|+++
T Consensus         2 py~cqyc~yrsa-dssnlkthikt   24 (30)
T d1klra_           2 TYQCQYCEFRSA-DSSNLKTHIKT   24 (30)
T ss_dssp             CCCCSSSSCCCS-CSHHHHHHHHH
T ss_pred             Cccccccccccc-cchhhhhhhhc
Confidence            455555555554 55555555554

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.07  E-value=0.00019  Score=25.75  Aligned_cols=29  Identities=21%  Similarity=0.494  Sum_probs=22.5

Q ss_pred             CCceeCCCCCCCCCCcchHHHHhhhhcCC
Q psy14694         34 RKKYDCFMCPYRTPYSGTMRRHIRAHIGD   62 (102)
Q Consensus        34 ~~~~~c~~c~~~~~~~~~l~~h~~~h~~~   62 (102)
                      +.-|.|..|...|...-.|..|+..|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            34578888888888888888888888774

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.04  E-value=0.00019  Score=25.32  Aligned_cols=22  Identities=27%  Similarity=0.603  Sum_probs=17.1

Q ss_pred             CccCCCCCCccCCchhhhhhhh
Q psy14694         64 PYKCFVCPYRSNQRANLMSHPL   85 (102)
Q Consensus        64 ~~~c~~c~~~f~~~~~l~~h~~   85 (102)
                      ||+|.+||+.+-+..+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            6788888888888888877753

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.99  E-value=0.00019  Score=27.91  Aligned_cols=26  Identities=27%  Similarity=0.538  Sum_probs=13.6

Q ss_pred             CCCccCC--CCCCccCCchhhhhhhhhc
Q psy14694         62 DRPYKCF--VCPYRSNQRANLMSHPLVQ   87 (102)
Q Consensus        62 ~~~~~c~--~c~~~f~~~~~l~~h~~~~   87 (102)
                      +|||.|.  -|+..|.....|..|..-|
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhh
Confidence            4555553  3555555555555554443

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.99  E-value=0.00039  Score=25.34  Aligned_cols=24  Identities=21%  Similarity=0.385  Sum_probs=16.6

Q ss_pred             CccCCc--cccccccCHHHHHHHHhhh
Q psy14694          1 ILKCTH--CKVDLNLDTEIILQHYKLC   25 (102)
Q Consensus         1 ~~~c~~--c~~~f~~~~~~l~~h~~~~   25 (102)
                      ||.|..  |++.+. +.+.|..|++.+
T Consensus         2 PY~Ck~~gC~K~Yt-dPSSLRKH~k~~   27 (29)
T d2glia5           2 PYVCKLPGCTKRYT-DPSSLRKHVKTV   27 (29)
T ss_dssp             CEECCSTTTCCEES-SHHHHHHHHHHS
T ss_pred             CeecccCCCCcccC-CHHHHHHHHHhh
Confidence            566665  777776 777777777654

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.98  E-value=0.00029  Score=25.01  Aligned_cols=25  Identities=32%  Similarity=0.632  Sum_probs=15.5

Q ss_pred             CccCCCCCCccCCchhhhhhhhhcC
Q psy14694         64 PYKCFVCPYRSNQRANLMSHPLVQI   88 (102)
Q Consensus        64 ~~~c~~c~~~f~~~~~l~~h~~~~~   88 (102)
                      |-+|++|..+-+.+..|+.|.|+|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            3456666666666666666666653

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.95  E-value=0.00031  Score=25.85  Aligned_cols=26  Identities=27%  Similarity=0.452  Sum_probs=16.2

Q ss_pred             CceeCCC--CCCCCCCcchHHHHh-hhhc
Q psy14694         35 KKYDCFM--CPYRTPYSGTMRRHI-RAHI   60 (102)
Q Consensus        35 ~~~~c~~--c~~~~~~~~~l~~h~-~~h~   60 (102)
                      +||.|..  |.+.|+..+.-..|+ |+|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            3556644  667777777766665 5554

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.94  E-value=0.00026  Score=26.93  Aligned_cols=24  Identities=21%  Similarity=0.220  Sum_probs=17.5

Q ss_pred             CCCCCCCCCCcchHHHHhhhhcCC
Q psy14694         39 CFMCPYRTPYSGTMRRHIRAHIGD   62 (102)
Q Consensus        39 c~~c~~~~~~~~~l~~h~~~h~~~   62 (102)
                      |+.-++.|.....|..|+|.|+||
T Consensus        10 C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          10 CSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhhcCCC
Confidence            444556677778888888888875

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.53  E-value=0.00093  Score=24.55  Aligned_cols=21  Identities=14%  Similarity=0.536  Sum_probs=11.7

Q ss_pred             CccCCccccccccCHHHHHHHH
Q psy14694          1 ILKCTHCKVDLNLDTEIILQHY   22 (102)
Q Consensus         1 ~~~c~~c~~~f~~~~~~l~~h~   22 (102)
                      ||.|..|++.|. ....+.+|+
T Consensus         1 Pf~C~~C~R~Fa-RrDLlLRH~   21 (31)
T d2adra2           1 PYPCGLCNRAFT-RRDLLIRHA   21 (31)
T ss_dssp             SEECTTTCCEES-SHHHHHHHH
T ss_pred             Ccccccccchhh-HHHHHHHHH
Confidence            556666666665 544444544

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=96.35  E-value=0.0006  Score=26.75  Aligned_cols=25  Identities=16%  Similarity=0.421  Sum_probs=15.4

Q ss_pred             CCccCCCCCCccCCchhhhhhhhhcCCCCccccccccc
Q psy14694         63 RPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKIRI  100 (102)
Q Consensus        63 ~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c~~  100 (102)
                      +.|.|..||...             .|+.|-.||.||-
T Consensus         4 ~~~~C~vCG~i~-------------~g~~P~~CPvCg~   28 (37)
T d1nnqa2           4 KVYICPICGYTA-------------VDEAPEYCPVCGA   28 (37)
T ss_dssp             CEEECTTTCCEE-------------ESCCCSBCTTTCC
T ss_pred             cEEECCCCCCEe-------------cCCCCCcCCCCCC
Confidence            457777777432             3455667777763

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.31  E-value=0.00091  Score=27.28  Aligned_cols=24  Identities=17%  Similarity=0.213  Sum_probs=19.1

Q ss_pred             CccCCCCCCccCCchhhhhhhhhc
Q psy14694         64 PYKCFVCPYRSNQRANLMSHPLVQ   87 (102)
Q Consensus        64 ~~~c~~c~~~f~~~~~l~~h~~~~   87 (102)
                      .+.|-.|++.|.....|++|...|
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             eeeccccccccCCHHHHhHhHHhc
Confidence            467888888888888888887665

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.12  E-value=0.0017  Score=25.15  Aligned_cols=28  Identities=21%  Similarity=0.319  Sum_probs=23.4

Q ss_pred             CCCceeCC--CCCCCCCCcchHHHHhhhhc
Q psy14694         33 SRKKYDCF--MCPYRTPYSGTMRRHIRAHI   60 (102)
Q Consensus        33 ~~~~~~c~--~c~~~~~~~~~l~~h~~~h~   60 (102)
                      .++||.|.  -|+..|.+...|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            57899994  49999999999999887764

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=96.10  E-value=0.0011  Score=25.81  Aligned_cols=26  Identities=15%  Similarity=0.225  Sum_probs=14.8

Q ss_pred             CCCccCCCCCCccCCchhhhhhhhhcCCCCccccccccc
Q psy14694         62 DRPYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKIRI  100 (102)
Q Consensus        62 ~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c~~  100 (102)
                      ++.|.|..||..             +.|+.|=.||.||-
T Consensus         3 ~~~~vC~vCGyi-------------~~g~~Pe~CPvCg~   28 (36)
T d1yuza2           3 DKFHLCPICGYI-------------HKGEDFEKCPICFR   28 (36)
T ss_dssp             CCEEECSSSCCE-------------EESSCCSBCTTTCC
T ss_pred             CCEEECCCCCCE-------------eeCCCCCcCCCCCC
Confidence            345677777633             23445556777763

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.66  E-value=0.012  Score=20.98  Aligned_cols=24  Identities=21%  Similarity=0.375  Sum_probs=18.3

Q ss_pred             ccCCccccccccCHHHHHHHHhhhc
Q psy14694          2 LKCTHCKVDLNLDTEIILQHYKLCS   26 (102)
Q Consensus         2 ~~c~~c~~~f~~~~~~l~~h~~~~~   26 (102)
                      |.|.+|++... +...+.-|.+..+
T Consensus         3 ftc~hcgkqlk-s~~gmkyhvmadh   26 (30)
T d2ctda2           3 FTCHHCGKQLR-SLAGMKYHVMANH   26 (30)
T ss_dssp             CCCSSSCCCCS-SHHHHHHHHHHHT
T ss_pred             eechhHHHHHh-hccCceEEEeecc
Confidence            67888888887 7778887776543

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.49  E-value=0.0027  Score=23.09  Aligned_cols=22  Identities=18%  Similarity=0.347  Sum_probs=14.3

Q ss_pred             CCCCCCCCcchHHHHhhhhcCC
Q psy14694         41 MCPYRTPYSGTMRRHIRAHIGD   62 (102)
Q Consensus        41 ~c~~~~~~~~~l~~h~~~h~~~   62 (102)
                      .|+..+.....|..|+-.|+||
T Consensus        10 dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1          10 DCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             GGCCEESSHHHHHHHHHHHHCC
T ss_pred             CcchhhccchhhhHHhhhhcCC
Confidence            3666666666677776666664

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.31  E-value=0.0038  Score=21.96  Aligned_cols=22  Identities=18%  Similarity=0.350  Sum_probs=19.2

Q ss_pred             ccCCCCCCccCCchhhhhhhhh
Q psy14694         65 YKCFVCPYRSNQRANLMSHPLV   86 (102)
Q Consensus        65 ~~c~~c~~~f~~~~~l~~h~~~   86 (102)
                      |+|+.|+-...+.+.|..|++-
T Consensus         3 ~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHH
T ss_pred             ccCCcchhheeehhhhhHHhhh
Confidence            7899999999999999888875

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.27  E-value=0.0025  Score=22.28  Aligned_cols=20  Identities=15%  Similarity=0.243  Sum_probs=16.4

Q ss_pred             CCCCccCCchhhhhhhhhcC
Q psy14694         69 VCPYRSNQRANLMSHPLVQI   88 (102)
Q Consensus        69 ~c~~~f~~~~~l~~h~~~~~   88 (102)
                      .|+++|.....|+.|+.+|+
T Consensus         8 ~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           8 NCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             TCCCEESSHHHHHHHHHHHH
T ss_pred             CchHHHhhccceEEEeeccc
Confidence            48899998888888887765

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.95  E-value=0.015  Score=23.57  Aligned_cols=24  Identities=25%  Similarity=0.386  Sum_probs=16.5

Q ss_pred             ccCCccccccccCHHHHHHHHhhhc
Q psy14694          2 LKCTHCKVDLNLDTEIILQHYKLCS   26 (102)
Q Consensus         2 ~~c~~c~~~f~~~~~~l~~h~~~~~   26 (102)
                      |.|-.|++.|. +...|.+|...|.
T Consensus         7 ~pCG~CgK~Ft-d~~rLr~HEAQHG   30 (53)
T d2eppa1           7 LPCGLCGKVFT-DANRLRQHEAQHG   30 (53)
T ss_dssp             CCCTTTCCCCS-CHHHHHHHHHHHT
T ss_pred             eeccccccccC-CHHHHhHhHHhcC
Confidence            56777777777 7777777766653

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.95  E-value=0.013  Score=20.07  Aligned_cols=22  Identities=18%  Similarity=0.519  Sum_probs=15.5

Q ss_pred             ccCCccccccccCHHHHHHHHhh
Q psy14694          2 LKCTHCKVDLNLDTEIILQHYKL   24 (102)
Q Consensus         2 ~~c~~c~~~f~~~~~~l~~h~~~   24 (102)
                      |.|+.|-+.|. ...+|..|.++
T Consensus         2 ypcp~cfkeft-rkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFT-RKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEES-CHHHHHHHHHH
T ss_pred             cCCchhhHHhc-cccCceEEEEE
Confidence            56777777776 77777777654

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=94.87  E-value=0.0082  Score=22.22  Aligned_cols=21  Identities=19%  Similarity=0.488  Sum_probs=16.5

Q ss_pred             ccCCCCCCccCCchhhhhhhh
Q psy14694         65 YKCFVCPYRSNQRANLMSHPL   85 (102)
Q Consensus        65 ~~c~~c~~~f~~~~~l~~h~~   85 (102)
                      |.|..||-.|+..+.|..|+.
T Consensus         9 f~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           9 FMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CBCTTTCCBCSCHHHHHHHTT
T ss_pred             eeccccceeecChhHHHhhhh
Confidence            678888888888888877764

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.54  E-value=0.0033  Score=27.94  Aligned_cols=22  Identities=23%  Similarity=0.378  Sum_probs=15.2

Q ss_pred             ccCCCCCCccCCchhhhhhhhh
Q psy14694         65 YKCFVCPYRSNQRANLMSHPLV   86 (102)
Q Consensus        65 ~~c~~c~~~f~~~~~l~~h~~~   86 (102)
                      |-|..|++.|.....|..|.++
T Consensus        16 fYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          16 HRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             SEETTTTEECSSHHHHHHHTTC
T ss_pred             EecccccCccCCHHHHHHHHcc
Confidence            6677777777777777766654

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.73  E-value=0.016  Score=20.44  Aligned_cols=20  Identities=10%  Similarity=0.064  Sum_probs=15.4

Q ss_pred             CCCCccCCchhhhhhhhhcC
Q psy14694         69 VCPYRSNQRANLMSHPLVQI   88 (102)
Q Consensus        69 ~c~~~f~~~~~l~~h~~~~~   88 (102)
                      -|++.|...+.+..|+.+|.
T Consensus         8 gC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGGS
T ss_pred             cHHHHhhchHHHHHHhhccC
Confidence            37888888888888877763

>d2gmga1 a.4.5.82 (A:1-105) Hypothetical protein PF0610 {Pyrococcus furiosus [TaxId: 2261]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: PF0610-like
domain: Hypothetical protein PF0610
species: Pyrococcus furiosus [TaxId: 2261]

Probab=93.35  E-value=0.024  Score=27.26  Aligned_cols=26  Identities=19%  Similarity=0.340  Sum_probs=15.9

Q ss_pred             CccCCCCCCccCCchhhhhhhhhcCCCCccccccccc
Q psy14694         64 PYKCFVCPYRSNQRANLMSHPLVQISDEQLRFKKIRI  100 (102)
Q Consensus        64 ~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~C~~c~~  100 (102)
                      |-.|..||+.|...           -.+|-.||.|+-
T Consensus        67 Pp~CrkCGfvFr~~-----------~kkPSRCP~CKS   92 (105)
T d2gmga1          67 PAQCRKCGFVFKAE-----------INIPSRCPKCKS   92 (105)
T ss_dssp             CCBBTTTCCBCCCC-----------SSCCSSCSSSCC
T ss_pred             ChhhhhcCCeeccc-----------CCCCCCCCCCCC
Confidence            56777777776321           245677777753

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.78  E-value=0.02  Score=25.33  Aligned_cols=22  Identities=18%  Similarity=0.477  Sum_probs=16.9

Q ss_pred             ccCCccccccccCHHHHHHHHhh
Q psy14694          2 LKCTHCKVDLNLDTEIILQHYKL   24 (102)
Q Consensus         2 ~~c~~c~~~f~~~~~~l~~h~~~   24 (102)
                      |-|..|++.|. +...|..|.++
T Consensus        16 fYCv~C~K~F~-se~~l~~H~ks   37 (67)
T d1zr9a1          16 HRCLACARYFI-DSTNLKTHFRS   37 (67)
T ss_dssp             SEETTTTEECS-SHHHHHHHTTC
T ss_pred             EecccccCccC-CHHHHHHHHcc
Confidence            56788888887 88888888654

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=91.93  E-value=0.067  Score=21.53  Aligned_cols=25  Identities=28%  Similarity=0.450  Sum_probs=13.1

Q ss_pred             CCCccCCCCCCccCCchhhhhhhhh
Q psy14694         62 DRPYKCFVCPYRSNQRANLMSHPLV   86 (102)
Q Consensus        62 ~~~~~c~~c~~~f~~~~~l~~h~~~   86 (102)
                      +.|..|+.|+-...+..+|.+|+..
T Consensus        22 ~qpatcpic~avirqsrnlrrhlel   46 (54)
T d1yuja_          22 EQPATCPICYAVIRQSRNLRRHLEL   46 (54)
T ss_dssp             SCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHH
Confidence            3455555555555555555555443

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.48  E-value=0.17  Score=17.81  Aligned_cols=21  Identities=14%  Similarity=0.226  Sum_probs=15.2

Q ss_pred             CCccccccccCHHHHHHHHhhh
Q psy14694          4 CTHCKVDLNLDTEIILQHYKLC   25 (102)
Q Consensus         4 c~~c~~~f~~~~~~l~~h~~~~   25 (102)
                      -+-|++.|+ ....|..|.+..
T Consensus         5 f~gc~kifs-nrqylnhh~kyq   25 (30)
T d2dlka1           5 FPGCGRIFS-NRQYLNHHKKYQ   25 (30)
T ss_dssp             STTTCCEES-SHHHHHHHHHHG
T ss_pred             CCCchhhhc-cHHHHHhHHHHH
Confidence            346889998 777777776654

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=90.23  E-value=0.056  Score=20.16  Aligned_cols=25  Identities=24%  Similarity=0.554  Sum_probs=14.6

Q ss_pred             CCCccCCCCCCccCCchhhhhhhhh
Q psy14694         62 DRPYKCFVCPYRSNQRANLMSHPLV   86 (102)
Q Consensus        62 ~~~~~c~~c~~~f~~~~~l~~h~~~   86 (102)
                      +-.|.|..|.+.+...+++-+|-.+
T Consensus         6 ~~~yRC~~C~r~YTHISNFCRHyvt   30 (37)
T d2drpa1           6 EHTYRCKVCSRVYTHISNFCRHYVT   30 (37)
T ss_dssp             TTEEECTTTCCEESSHHHHHHHHHH
T ss_pred             CcEEEeehhhHHHHHHHHHHHHHHh
Confidence            3446666666666666666665443

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.63  E-value=0.14  Score=22.17  Aligned_cols=24  Identities=25%  Similarity=0.646  Sum_probs=19.9

Q ss_pred             ccCCccccccccCHHHHHHHHhhhc
Q psy14694          2 LKCTHCKVDLNLDTEIILQHYKLCS   26 (102)
Q Consensus         2 ~~c~~c~~~f~~~~~~l~~h~~~~~   26 (102)
                      |.|.+|...|. +...|..|+..|.
T Consensus        19 yQC~HCd~K~~-s~~el~~hl~~hn   42 (75)
T d1x6fa1          19 YQCKHCDSKLQ-STAELTSHLNIHN   42 (75)
T ss_dssp             EECSSSCCEES-SHHHHHHHHHHHH
T ss_pred             eeechhHHHHh-hHHHHHHHHHhcc
Confidence            78889998887 8888888888775

>d6rxna_ g.41.5.1 (A:) Rubredoxin {Desulfovibrio desulfuricans, strain 27774 [TaxId: 876]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubredoxin
species: Desulfovibrio desulfuricans, strain 27774 [TaxId: 876]

Probab=88.10  E-value=0.11  Score=20.98  Aligned_cols=10  Identities=40%  Similarity=1.036  Sum_probs=4.8

Q ss_pred             eeCCCCCCCC
Q psy14694         37 YDCFMCPYRT   46 (102)
Q Consensus        37 ~~c~~c~~~~   46 (102)
                      |.|..|+..+
T Consensus         4 y~C~~CgyiY   13 (45)
T d6rxna_           4 YVCNVCGYEY   13 (45)
T ss_dssp             EEETTTCCEE
T ss_pred             eEeCCCCeEE
Confidence            4455555443

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.80  E-value=0.29  Score=21.10  Aligned_cols=38  Identities=13%  Similarity=0.327  Sum_probs=22.6

Q ss_pred             CCCceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCc
Q psy14694         33 SRKKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYR   73 (102)
Q Consensus        33 ~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~   73 (102)
                      ....|.|+.|++.|+...++.   -.......|.|..|+-.
T Consensus        11 ~~~~y~Cp~C~~~ys~Lda~~---L~d~~~~~F~C~~C~~e   48 (62)
T d1vd4a_          11 NRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTE   48 (62)
T ss_dssp             SSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCB
T ss_pred             cCCceECCCCCCCcchhhHHH---hcCcCCCeEEecCCCCE
Confidence            456677888877776544433   23333445777777643

>d1iroa_ g.41.5.1 (A:) Rubredoxin {Clostridium pasteurianum [TaxId: 1501]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubredoxin
species: Clostridium pasteurianum [TaxId: 1501]

Probab=87.65  E-value=0.19  Score=20.94  Aligned_cols=12  Identities=33%  Similarity=0.780  Sum_probs=6.4

Q ss_pred             eeCCCCCCCCCC
Q psy14694         37 YDCFMCPYRTPY   48 (102)
Q Consensus        37 ~~c~~c~~~~~~   48 (102)
                      |.|..|+..+..
T Consensus         4 y~C~~CgyiYd~   15 (53)
T d1iroa_           4 YTCTVCGYIYNP   15 (53)
T ss_dssp             EEETTTCCEECT
T ss_pred             eEcCCCCcEECc
Confidence            556666555443

>d1lkoa2 g.41.5.1 (A:148-191) Rubrerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=87.13  E-value=0.054  Score=21.76  Aligned_cols=9  Identities=44%  Similarity=1.139  Sum_probs=4.5

Q ss_pred             ceeCCCCCC
Q psy14694         36 KYDCFMCPY   44 (102)
Q Consensus        36 ~~~c~~c~~   44 (102)
                      .+.|..||.
T Consensus         8 ~W~C~~CGy   16 (44)
T d1lkoa2           8 KWRCRNCGY   16 (44)
T ss_dssp             EEEETTTCC
T ss_pred             EEEcCCCCc
Confidence            345555544

>d1m36a_ g.37.1.2 (A:) Monocytic leukemia zinc finger protein Moz {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: Monocytic leukemia zinc finger protein Moz
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.23  E-value=0.26  Score=18.35  Aligned_cols=24  Identities=25%  Similarity=0.337  Sum_probs=17.4

Q ss_pred             CCccCCCCCCccCCchhhhhhhhh
Q psy14694         63 RPYKCFVCPYRSNQRANLMSHPLV   86 (102)
Q Consensus        63 ~~~~c~~c~~~f~~~~~l~~h~~~   86 (102)
                      +.|.|..|-+-......+.+|+.-
T Consensus         6 kLyiCEfCLKYmks~~~l~RH~~K   29 (33)
T d1m36a_           6 KLYLCEFCLKYMKSRTILQQHMKK   29 (33)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHHH
T ss_pred             eeeeehhhhhhhCCHHHHHHHHHh
Confidence            457777888777777777777653

>d2czra1 c.52.4.1 (A:1-218) TBP-interacting protein {Thermococcus kodakaraensis [TaxId: 311400]}

class: Alpha and beta proteins (a/b)
fold: Restriction endonuclease-like
superfamily: TBP-interacting protein-like
family: TBP-interacting protein-like
domain: TBP-interacting protein
species: Thermococcus kodakaraensis [TaxId: 311400]

Probab=85.98  E-value=0.11  Score=27.21  Aligned_cols=23  Identities=26%  Similarity=0.463  Sum_probs=14.7

Q ss_pred             ceeCCCCCCCCCCcchHHHHhhhh
Q psy14694         36 KYDCFMCPYRTPYSGTMRRHIRAH   59 (102)
Q Consensus        36 ~~~c~~c~~~~~~~~~l~~h~~~h   59 (102)
                      .|.|..|++ +....+|..|++.|
T Consensus       146 FYKCe~CgK-YvDie~~~~H~k~H  168 (218)
T d2czra1         146 FYKCEECGK-YVDIENLEAHLREH  168 (218)
T ss_dssp             EEECTTTCC-EEEGGGHHHHHHTT
T ss_pred             EeehhhcCc-eecHHHHHHHHHHc
Confidence            367777776 33446677777765

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=84.24  E-value=0.32  Score=17.11  Aligned_cols=22  Identities=27%  Similarity=0.467  Sum_probs=16.5

Q ss_pred             CccC--CCCCCccCCchhhhhhhh
Q psy14694         64 PYKC--FVCPYRSNQRANLMSHPL   85 (102)
Q Consensus        64 ~~~c--~~c~~~f~~~~~l~~h~~   85 (102)
                      .|.|  ..|+..|....+++.|.-
T Consensus         2 nf~cdsd~cdl~fttkanmkkhfn   25 (31)
T d1tf3a3           2 NFTCDSDGCDLRFTTKANMKKHFN   25 (31)
T ss_dssp             CEECSSSSCCCEESSHHHHHHHHH
T ss_pred             CccccCCCcceEEeehHHHHHHHh
Confidence            3455  358999999999988843

>d1jj2y_ g.41.8.1 (Y:) Ribosomal protein L37ae {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zn-binding ribosomal proteins
family: Ribosomal protein L37ae
domain: Ribosomal protein L37ae
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=84.12  E-value=0.12  Score=23.05  Aligned_cols=32  Identities=28%  Similarity=0.561  Sum_probs=17.8

Q ss_pred             CceeCCCCCCCCCCcchHHHHhhhhcCCCCccCCCCCCccCC
Q psy14694         35 KKYDCFMCPYRTPYSGTMRRHIRAHIGDRPYKCFVCPYRSNQ   76 (102)
Q Consensus        35 ~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~   76 (102)
                      ..|.|+.|++.-.        .+.-  .-.|.|..|++.|.-
T Consensus        26 ~ky~Cp~Cgk~~v--------kR~a--~GIW~C~kC~~~~AG   57 (73)
T d1jj2y_          26 KKHKCPVCGFKKL--------KRAG--TGIWMCGHCGYKIAG   57 (73)
T ss_dssp             SCBCCSSSCCSCE--------EEEE--TTEEEETTTCCEEEC
T ss_pred             CCccCCCCCCCce--------EEEE--EEEEECCCCCCEEeC
Confidence            4577777765311        1212  235777777777653

>d2dsxa1 g.41.5.1 (A:1-52) Rubredoxin {Desulfovibrio gigas [TaxId: 879]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubredoxin
species: Desulfovibrio gigas [TaxId: 879]

Probab=84.07  E-value=0.41  Score=19.80  Aligned_cols=10  Identities=40%  Similarity=1.065  Sum_probs=4.9

Q ss_pred             eeCCCCCCCC
Q psy14694         37 YDCFMCPYRT   46 (102)
Q Consensus        37 ~~c~~c~~~~   46 (102)
                      |.|..|+..+
T Consensus         4 y~C~~CgyiY   13 (52)
T d2dsxa1           4 YVCTVCGYEY   13 (52)
T ss_dssp             EEETTTCCEE
T ss_pred             EEeCCCCeEE
Confidence            4455555444