Psyllid ID: psy14715

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------115

MMFHRLRHSHHPPVYLNNIEIKYKESHKWLGLIVDSKLNWIPQINYLNNKLKLSSNILKMLNNPSWGLNRSILLKIYNSYCRPITDYGSIVYQSAKPSAKGKLNSTHNNFIRLCTGAFRSSPLDSLFCEMAPEKKFISHSFEEGAEVEGFLVKNVTPIPEFQMTAIKLQHVKTLAEYFHLSRDDSNNVFAVAFRTPPPDSTGITHILEHLSLCGSVKYPCRDPFMKMLTRSMATFMNAMTGPDYTFYPFSSQNHCDYFNLMSIYLDAVFNPQLKQLDFMQEGWRLEHEDIKDQNSPIIFKGVVFNEMKGAFSDNSYIFGEALMNNILPTYCYKHVSGGDPIKILNLKYENLVNYHKKHYHPTNSKFFSYGNFNLEDHLSFINTNYLSKINPYQHHRSSTAVLPEPAWDKPRQLHIHGRHDPLASENQSHIAIAYKCAVMDNFKDVFVLNILGDLLLKGPNAPFYKNLVESGLGLSFSPVTGYEASIHDTLFTVGLQGVDSNKFDEIIGAVNKTIDEVIAEGFDKERVAIGLQGVDSNKFDEIKGAVNKTIDEVIAEGFDKERVASVLHSLELSLKHQSSNFGLNLLFWLVPFMNHDCDVIHLLHINDRLNWFKKHIQENPTYLQEKVDEYLRNNPHKLIITMSPEKTFDEKLDKVEKDILKDRISQMNDQDLNKVYVNGTELRKEQEKEQNIDVLPTLKISDVDDHVERVVTTDKHILQVPIQLSTQPTNGVTYFRSVVDTSKLSPELKPLVPLFNYVINQMRTKNYDFREMDQLIHMSTGGISFNSHLGESCSTPNGFEEAILVSSHCLEHNNDKMFDVLSELFNNVQLTDLNRFTTLVNTLSSELINGISGNGHRYAMSIASSLVDPVSEQKEIYSGLSFVSKIKEIAQSPKLENILQDIQSIGAHVLRKDSMRCALNMSAQSNAPERLESFLQSIPGDFTSQPGQTVHSFNVSGIQKVSHVLPFPVNFTAKSLRGVPFLHKDYVALKVLSKFLTTKYLLREVREKNGAYGAGAVVSPSGVIQFYSYRDPYALETLATFDQSTQFLADTKLSVQDLDEAKLGVFKEVDAPIPPGSKGMSKFLYGKTDEMIEQYRLSVKQVTEDDIRRVADTYLSRDATEKLSSYVVIGPKSNNLGDEWKIVEHDN

ccccccccccccccccccEEEEEcccccEEEEEEccccccccHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHcccccccccEEEEcccccccccccccccHHHHHHHccccccccccHHHHcccccHHccccccccccEEccEEEEEEEEcccccEEEEEEEEcccccEEEEEEccccccEEEEEEEcccccccccHHHHHHHHcccccccccccHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHcccccccHHHHHcccccccccccccccccEEEEEEEEEcccccccccHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHccccccccEEEEEEccccHHHHHHHHHHHHHccccccccccccccccccccccccEEEEEEccccccccccccEEEEEEEccccccHHHHHHHHHHHHHHcccccHHcHHHHHHcccccccccccccccccccEEEEEEEEccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHccccccHHHHHHHccHHHHHHHHHHcccHHHHHHHHHHHHHHHccccccHHHHHHHHHcccccccccHHHHHcHHHHHHHHHHHHHcccHHHHHHHHHHHHccccEEEEEEEccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccEEEEEcccccEEEEEEEEcccccccccccccccHHHHHcccccccccHHHHHHHHHHHcccEEEEEEEcccccccccccEEEEEEEEEccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHccccHHHHHHHHccHHHHHHHHHHHccccHHHHHHHHHHHHHHHccccccEEEEEEccccccHHHHHHHHHccccccccccccccccccccccccEEEEEcccEEEEEEEccccccccccHHHHHHHHHHHcccccHHHHHHccccEEEEEEEccccEEEEEEEEcccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccccccHHHHHHHHHHccccHHHHHHHHHHHHcccHHHHHHHHHHHHcccccccccEEEEEcccccccccccEEEcccc

cccEEccccccccEEEccEEEEEccHHHHHEEEEcccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccccHHHHHccHHHHHHHHHHHcccHHHHHHHHHHcccccccccccccHHHHHHcccccccEEcEEEEEEEEEccccEEEEEEEEEcccccEEEEEEccccccEEEEEEEccccccccccEEEEEEEEccccccccccHHHHHHHHHHHHHHHHcccccccEcccccccHHHHHHHHHHHHHHHHcccccHHHHHHcccEEcccccccccccEEEEEEEEcccccccccHHHHHHHHHHHHHcccccEEccccccHcHcccccHHHHHHHHHHHccccccEEEEEccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEEEccccccccccccEEEEEEEccccccHHHHHHHHHHHHHHccccccHHHHHHHHccccccccccccccccccccEEEEEEccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHccHHccccccHHHcccHHHHHHHHHHHHcccHHHHHHHHHHHHccccEEEEEEcccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccHHHHHccccEEEcccccccccccEEEEEccccEEEEEEcccccEEEEEEEEccccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHcccEEcccEEccccccccccccEEEEEcHHHHccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcccHHHHHHHHHccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccccEEEEEccccHHHHHHHHHHHHHccccccccccccccccccccccccEEEEcccEEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccEEEccccEEEEEEcccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccccHHHHHHHHccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHccccccEEEEEcccccccccccEEEEccc

mmfhrlrhshhppvylnnIEIKYKESHKWLGLIVDsklnwipqinyLNNKLKLSSNILKMlnnpswglnRSILLKIYNsycrpitdygsivyqsakpsakgklnstHNNFIRLCtgafrsspldslfcemapekkfisHSFEEGAEVEGFlvknvtpipefQMTAIKLQHVKTLAEYFHlsrddsnnvfavafrtpppdstgiTHILEHLslcgsvkypcrdpfmKMLTRSMATFmnamtgpdytfypfssqnhcdyFNLMSIYLDavfnpqlkqlDFMQEGWRlehedikdqnspiifkGVVFNemkgafsdnsyIFGEALMNnilptycykhvsggdpikilNLKYENLVNYhkkhyhptnskffsygnfnledhLSFINTnylskinpyqhhrsstavlpepawdkprqlhihgrhdplasenqsHIAIAYKCAVMDNFKDVFVLNILGdlllkgpnapfyknlvesglglsfspvtgyeasihDTLFTvglqgvdsnkfDEIIGAVNKTIDEVIAEGFDKERVAIglqgvdsnkfdEIKGAVNKTIDEVIAEGFDKERVASVLHSLELSLKhqssnfglnLLFWLVpfmnhdcdvihLLHINDRLNWFKKHIQENPTYLQEKVDEYlrnnphkliitmspektfdEKLDKVEKDILKDRISqmndqdlnkvyVNGTelrkeqekeqnidvlptlkisdvddhvervvttdkhilqvpiqlstqptngvtYFRSVVdtsklspelkplvpLFNYVINQmrtknydfremdQLIHMstggisfnshlgescstpngfEEAILVSSHCLEHNNDKMFDVLSELFnnvqltdlnRFTTLVNTLSSELingisgngHRYAMSIASslvdpvseqkeiysglSFVSKIKEIAQSPKLENILQDIQSIGAHVLRKDSMRCalnmsaqsnaPERLESFLqsipgdftsqpgqtvhsfnvsgiqkvshvlpfpvnftakslrgvpflhKDYVALKVLSKFLTTKYLLREVREkngaygagavvspsgviqfysyrdpyaletlatfDQSTQFLADtklsvqdldeaklgvfkevdapippgskgmskflygKTDEMIEQYRLSVKQVTEDDIRRVADTYLSRDATEKLSSYVvigpksnnlgdewkivehdn

mmfhrlrhshhppvYLNNIEIKYKESHKWLGLIVDSKLNWIPQINYLNNKLKLSSNILKMLNNPSWGLNRSILLKIYNSYCRPITDYGSIVYQSAKPSAKGKLNSTHNNFIRLCTGAFRSSPLDSLFCEMAPEKKFISHSFEEGAEVEGFLVKNVTPIPEFQMTAIKLQHVKTLAEYFHLSRDDSNNVFAVAFRTPPPDSTGITHILEHLSLCGSVKYPCRDPFMKMLTRSMATFMNAMTGPDYTFYPFSSQNHCDYFNLMSIYLDAVFNPQLKQLDFMQEGWRLEHedikdqnspiIFKGVVFNEMKGAFSDNSYIFGEALMNNILPTYCYKHVSGGDPIKILNLKYENLVNYHKKHYHPTNSKFFSYGNFNLEDHLSFINTNYLSKINPYQHHRSSTAVLPEPAWDKPRQLHIHGRHDPLASENQSHIAIAYKCAVMDNFKDVFVLNILGDLLLKGPNAPFYKNLVESGLGLSFSPVTGYEASIHDTLFTVGLQGVDSNKFDEIIGAVNKTIDEVIAEGFDKERVAIglqgvdsnkfdeiKGAVNKTIDEVIAEGFDKERVASVLHSLELSLKHQSSNFGLNLLFWLVPFMNHDCDVIHLLHINDRLNWFKKHIQENPTYLQEKVDEYLRNNPHKLIitmspektfdeKLDKVEKDILKdrisqmndqdlnkVYVNGTelrkeqekeqnidvlptlkisdvddHVERVVTTdkhilqvpiqlstqptngvTYFRSVVDtsklspelkplvpLFNYVINQMRTKNYDFREMDQLIHMSTGGISFNSHLGESCSTPNGFEEAILVSSHCLEHNNDKMFDVLSELFNNVQLTDLNRFTTLVNTLSSELINGISGNGHRYAMSIASSLVDPVSEQKEIYSGLSFVSKIKEIAQSPKLENILQDIQSIGAHVLRKDSMRCALNMSAQSNAPERLESFLQSIPGDFTSQPGQTVHSFNVSGIQKVSHVLPFPVNFTAKSLRGVPFLHKDYVALKVLSKFLTTKYLLREVREKngaygagavvspsGVIQFYSYRDPYALETLATFDQSTQFLADTKLSVQDLDEAKLGVfkevdapippgskgmSKFLYGKTDEMIEQYRLSvkqvteddIRRVADtylsrdateklssyvvigpksnnlgdewkivehdn

MMFHRLRHSHHPPVYLNNIEIKYKESHKWLGLIVDSKLNWIPQinylnnklklssnilkmlnnPSWGLNRSILLKIYNSYCRPITDYGSIVYQSAKPSAKGKLNSTHNNFIRLCTGAFRSSPLDSLFCEMAPEKKFISHSFEEGAEVEGFLVKNVTPIPEFQMTAIKLQHVKTLAEYFHLSRDDSNNVFAVAFRTPPPDSTGITHILEHLSLCGSVKYPCRDPFMKMLTRSMATFMNAMTGPDYTFYPFSSQNHCDYFNLMSIYLDAVFNPQLKQLDFMQEGWRLEHEDIKDQNSPIIFKGVVFNEMKGAFSDNSYIFGEALMNNILPTYCYKHVSGGDPIKILNLKYENLVNYHKKHYHPTNSKFFSYGNFNLEDHLSFINTNYLSKINPYQHHRSSTAVLPEPAWDKPRQLHIHGRHDPLASENQSHIAIAYKCAVMDNFKDVFVLNILGDLLLKGPNAPFYKNLVESGLGLSFSPVTGYEASIHDTLFTVGLQGVDSNKFDEIIGAVNKTIDEVIAEGFDKERVAIGLQGVDSNKFDEIKGAVNKTIDEVIAEGFDKERVASVLHSLELSLKHQSSNFGLNLLFWLVPFMNHDCDVIHLLHINDRLNWFKKHIQENPTYLQEKVDEYLRNNPHKLIITMSPEKTFDEKLDKVEKDILKDRISQMNDQDLNKVYVNGTELRKEQEKEQNIDVLPTLKISDVDDHVERVVTTDKHILQVPIQLSTQPTNGVTYFRSVVDTSKLSPELKPLVPLFNYVINQMRTKNYDFREMDQLIHMSTGGISFNSHLGESCSTPNGFEEAILVSSHCLEHNNDKMFDVLSELFNNVQLTDLNRFTTLVNTLSSELINGISGNGHRYAMSIASSLVDPVSEQKEIYSGLSFVSKIKEIAQSPKLENILQDIQSIGAHVLRKDSMRCALNMSAQSNAPERLESFLQSIPGDFTSQPGQTVHSFNVSGIQKVSHVLPFPVNFTAKSLRGVPFLHKDYVALKVLSKFLTTKYLLREVREKNGAYGAGAVVSPSGVIQFYSYRDPYALETLATFDQSTQFLADTKLSVQDLDEAKLGVFKEVDAPIPPGSKGMSKFLYGKTDEMIEQYRLSVKQVTEDDIRRVADTYLSRDATEKLSSYVVIGPKSNNLGDEWKIVEHDN

***********PPVYLNNIEIKYKESHKWLGLIVDSKLNWIPQINYLNNKLKLSSNILKMLNNPSWGLNRSILLKIYNSYCRPITDYGSIVYQSA*******LNSTHNNFIRLCTGAFRSSPLDSLFCEMAPEKKFISHSFEEGAEVEGFLVKNVTPIPEFQMTAIKLQHVKTLAEYFHLSRDDSNNVFAVAFRTPPPDSTGITHILEHLSLCGSVKYPCRDPFMKMLTRSMATFMNAMTGPDYTFYPFSSQNHCDYFNLMSIYLDAVFNPQLKQLDFMQEGWRLEHEDIKDQNSPIIFKGVVFNEMKGAFSDNSYIFGEALMNNILPTYCYKHVSGGDPIKILNLKYENLVNYHKKHYHPTNSKFFSYGNFNLEDHLSFINTNYLSKINPYQ***********************************HIAIAYKCAVMDNFKDVFVLNILGDLLLKGPNAPFYKNLVESGLGLSFSPVTGYEASIHDTLFTVGLQGVDSNKFDEIIGAVNKTIDEVIAEGFDKERVAIGLQGVDSNKFDEIKGAVNKTIDEVIAEGFDKERVASVLHSLELSLKHQSSNFGLNLLFWLVPFMNHDCDVIHLLHINDRLNWFKKHIQENPTYLQEKVDEYLRNNPHKLIITM********************************VYV**************IDVLPTLKISDVDDHVERVVTTDKHILQVPIQLSTQPTNGVTYFRSVVDTSKLSPELKPLVPLFNYVINQMRTKNYDFREMDQLIHMSTGGISFNSHLGESCSTPNGFEEAILVSSHCLEHNNDKMFDVLSELFNNVQLTDLNRFTTLVNTLSSELINGISGNGHRYAMSIASSLVDPVSEQKEIYSGLSFVSKIKEIAQSPKLENILQDIQSIGAHVLRKDSMRC*******************************TVHSFNVSGIQKVSHVLPFPVNFTAKSLRGVPFLHKDYVALKVLSKFLTTKYLLREVREKNGAYGAGAVVSPSGVIQFYSYRDPYALETLATFDQSTQFLADTKLSVQDLDEAKLGVFKEVDA*********SKFLYGKTDEMIEQYRLSVKQVTEDDIRRVADTYLSRDATEKLSSYVVIGPK***L***W*******

*********HH**VYLNNIEIKYKESHKWLGLIVDSKLNWIPQINYLNNKLKLSSNILKMLNNPSWGLNRSILLKIYNSYCRPITDYGSIVYQSAK***********NNFIRLCTGAFRSSPL*********************AEVEGFLVKNVTPIPEFQMTAIKLQHVKTLAEYFHLSRDDSNNVFAVAFRTPPPDSTGITHILEHLSLCGSVKYPCRDPFMKMLTRSMATFMNAMTGPDYTFYPFSSQNHCDYFNLMSIYLDAVFNPQLKQLDFMQEGWRLEHEDIKDQNSPIIFKGVVFNEMKGAFSDNSYIFGEALMNNILPTYCYKHVSGGDPIKILNLKYENLVNYHKKHYHPTNSKFFSYGNFNLEDHLSFINTNYLSKINPY*******************************SENQSHIAIAYKCAVMDNFKDVFVLNILGDLLLKGPNAPFYKNLVESGLGLSFSPVTGYEASIHDTLFTVGLQGVDSNKFDEIIGAVNKTIDEVIAEGFDKERVAIGLQGVDSNKFDEIKGAVNKTIDEVIAEGFDKERVASVLHSLELSLKHQSSNFGLNLLFWLVPFMNHDCDVIHLLHINDRLNWFKKHIQENPTYLQEKVDEYLRNNPHKLIITMSPEKT**************************KVYVNGTEL**********DVLPTLKISDVDDHVERVVTTDKHILQVPIQLSTQPTNGVTYFRSVVDTSKLSPELKPLVPLFNYVINQMRTKNYDFREMDQLIHMSTGGISFNSHLGESCSTPNGFEEAILVSSHCLEHNNDKMFDVLSELFNNVQLTDLNRFTTLVN***************RYAMSIASSLVDPVSEQKEIYSGLSFVSKIKEIAQSPKLENILQDIQSIGAHVLRKDSMRCALNMSAQSNAPERLESFLQSIP*******************Q*VSHVLPFPVNFTAKSLRGVPFLHKDYVALKVLSKFLTTKYLLREVREKNGAYGAGAVVSPSGVIQFYSYRDPYALETLATFDQSTQFLADTKLSVQDLDEAKLGVFKEVDAPIPPGSKGMSKFLYGKTDEMIEQYRLSVKQVTEDDIRRVADTYLSRDATEKLSSYVVIGPKSNNLGDEWKIVEH**

*********HHPPVYLNNIEIKYKESHKWLGLIVDSKLNWIPQINYLNNKLKLSSNILKMLNNPSWGLNRSILLKIYNSYCRPITDYGSIVYQSAKPSAKGKLNSTHNNFIRLCTGAFRSSPLDSLFCEMAPEKKFISHSFEEGAEVEGFLVKNVTPIPEFQMTAIKLQHVKTLAEYFHLSRDDSNNVFAVAFRTPPPDSTGITHILEHLSLCGSVKYPCRDPFMKMLTRSMATFMNAMTGPDYTFYPFSSQNHCDYFNLMSIYLDAVFNPQLKQLDFMQEGWRLEHEDIKDQNSPIIFKGVVFNEMKGAFSDNSYIFGEALMNNILPTYCYKHVSGGDPIKILNLKYENLVNYHKKHYHPTNSKFFSYGNFNLEDHLSFINTNYLSKINPYQHHRSSTAVLPEPAWDKPRQLHIHGRHDPLASENQSHIAIAYKCAVMDNFKDVFVLNILGDLLLKGPNAPFYKNLVESGLGLSFSPVTGYEASIHDTLFTVGLQGVDSNKFDEIIGAVNKTIDEVIAEGFDKERVAIGLQGVDSNKFDEIKGAVNKTIDEVIAEGFDKERVASVLHSLELSLKHQSSNFGLNLLFWLVPFMNHDCDVIHLLHINDRLNWFKKHIQENPTYLQEKVDEYLRNNPHKLIITMSPEKTFDEKLDKVEKDILKDRISQMNDQDLNKVYVNGTELRKEQEKEQNIDVLPTLKISDVDDHVERVVTTDKHILQVPIQLSTQPTNGVTYFRSVVDTSKLSPELKPLVPLFNYVINQMRTKNYDFREMDQLIHMSTGGISFNSHLGESCSTPNGFEEAILVSSHCLEHNNDKMFDVLSELFNNVQLTDLNRFTTLVNTLSSELINGISGNGHRYAMSIASSLVDPVSEQKEIYSGLSFVSKIKEIAQSPKLENILQDIQSIGAHVLRKDSMRCALNMSAQSNAPERLESFLQSIPGDFTSQPGQTVHSFNVSGIQKVSHVLPFPVNFTAKSLRGVPFLHKDYVALKVLSKFLTTKYLLREVREKNGAYGAGAVVSPSGVIQFYSYRDPYALETLATFDQSTQFLADTKLSVQDLDEAKLGVFKEVDAPIPPGSKGMSKFLYGKTDEMIEQYRLSVKQVTEDDIRRVADTYLSRDATEKLSSYVVIGPKSNNLGDEWKIVEHDN

**F*RLRHSHHPPVYLNNIEIKYKESHKWLGLIVDSKLNWIPQINYLNNKLKLSSNILKMLNNPSWGLNRSILLKIYNSYCRPITDYGSIVYQSAKPSAKGKLN*THNNFIRLCTGAFRSSPLDSLFCEMAPEKKFISHSFEEGAEVEGFLVKNVTPIPEFQMTAIKLQHVKTLAEYFHLSRDDSNNVFAVAFRTPPPDSTGITHILEHLSLCGSVKYPCRDPFMKMLTRSMATFMNAMTGPDYTFYPFSSQNHCDYFNLMSIYLDAVFNPQLKQLDFMQEGWRLEHEDIKDQNSPIIFKGVVFNEMKGAFSDNSYIFGEALMNNILPTYCYKHVSGGDPIKILNLKYENLVNYHKKHYHPTNSKFFSYGNFNLEDHLSFINTNYLSKINPYQHHRSSTAVLPEPAWDKPRQLHIHGRHDPLASENQSHIAIAYKCAVMDNFKDVFVLNILGDLLLKGPNAPFYKNLVESGLGLSFSPVTGYEASIHDTLFTVGLQGVDSNKFDEIIGAVNKTIDEVIAEGFDKERVAIGLQGVDSNKFDEIKGAVNKTIDEVIAEGFDKERVASVLHSLELSLKHQSSNFGLNLLFWLVPFMNHDCDVIHLLHINDRLNWFKKHIQENPTYLQEKVDEYLRNNPHKLIITMSPEKTFDEKLDKVEKDILKDRISQMNDQDLNKVYVNGTELRKEQEKEQNIDVLPTLKISDVDDHVERVVTTDKHILQVPIQLSTQPTNGVTYFRSVVDTSKLSPELKPLVPLFNYVINQMRTKNYDFREMDQLIHMSTGGISFNSHLGESCSTPNGFEEAILVSSHCLEHNNDKMFDVLSELFNNVQLTDLNRFTTLVNTLSSELINGISGNGHRYAMSIASSLVDPVSEQKEIYSGLSFVSKIKEIAQSPKLENILQDIQSIGAHVLRKDSMRCALNMSAQSNAPERLESFLQSIPGD*********HSFNVSGIQKVSHVLPFPVNFTAKSLRGVPFLHKDYVALKVLSKFLTTKYLLREVREKNGAYGAGAVVSPSGVIQFYSYRDPYALETLATFDQSTQFLADTKLSVQDLDEAKLGVFKEVDAPIPPGSKGMSKFLYGKTDEMIEQYRLSVKQVTEDDIRRVADTYLSRDATEKLSSYVVIGPKSNNLGDEWKIVE***

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		1147	2.2.26 [Sep-21-2011]
Q8K411		1036	Presequence protease, mit	yes	N/A	0.837	0.927	0.403	0.0
Q6PF24		1027	Presequence protease, mit	N/A	N/A	0.855	0.955	0.391	0.0
Q28BR5		1027	Presequence protease, mit	yes	N/A	0.849	0.948	0.384	0.0
Q5RDG3		1037	Presequence protease, mit	yes	N/A	0.841	0.930	0.398	0.0
Q5JRX3		1037	Presequence protease, mit	yes	N/A	0.841	0.930	0.396	0.0
Q9V9E3		1034	Presequence protease, mit	yes	N/A	0.831	0.922	0.398	0.0
Q7ZVZ6		1023	Presequence protease, mit	yes	N/A	0.829	0.930	0.392	0.0
Q6C0U8		990	Mitochondrial presequence	yes	N/A	0.822	0.952	0.343	1e-161
Q4IA56		1004	Mitochondrial presequence	yes	N/A	0.828	0.946	0.349	1e-161
Q7S7C0		1012	Mitochondrial presequence	N/A	N/A	0.827	0.937	0.344	1e-160

>sp\|Q8K411\|PREP_MOUSE Presequence protease, mitochondrial OS=Mus musculus GN=Pitrm1 PE=2 SV=1	Back alignment and function desciption

 Score =  778 bits (2009), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/1037 (40%), Positives = 613/1037 (59%), Gaps = 76/1037 (7%)

Query: 141  FEEGAEVEGFLVKNVTPIPEFQMTAIKLQHVKTLAEYFHLSRDDSNNVFAVAFRTPPPDS 200
            ++ G ++ GF V  VTP+PE  +TA+KL H  T A Y HL+R+D NN+F+V FRT P DS
Sbjct: 40   YKVGEKIHGFTVNQVTPVPELFLTAVKLSHDNTGARYLHLAREDKNNLFSVQFRTTPMDS 99

Query: 201  TGITHILEHLSLCGSVKYPCRDPFMKMLTRSMATFMNAMTGPDYTFYPFSSQNHCDYFNL 260
            TG+ H+LEH  LCGS KYPCRDPF KML RS++TFMNAMT  DYT YPFS+QN  D+ NL
Sbjct: 100  TGVPHVLEHTVLCGSQKYPCRDPFFKMLNRSLSTFMNAMTASDYTIYPFSTQNPKDFQNL 159

Query: 261  MSIYLDAVFNPQLKQLDFMQEGWRLEHEDIKDQNSPIIFKGVVFNEMKGAFSDNSYIFGE 320
            +S+YLDA F P L++LDF QEGWRLEHE+ +D  +P+IFKGVVFNEMKGAF+DN  IF +
Sbjct: 160  LSVYLDATFFPCLRELDFWQEGWRLEHENPRDPQTPLIFKGVVFNEMKGAFTDNERIFSQ 219

Query: 321  ALMNNILPTYCYKHVSGGDPIKILNLKYENLVNYHKKHYHPTNSKFFSYGNFNLEDHLSF 380
             L N +LP + Y  VSGGDP+ I  L +E L  +H  HYHP+N++FF+YGNF LE HL  
Sbjct: 220  HLQNKLLPDHTYSVVSGGDPLCIPELTWEQLKQFHATHYHPSNARFFTYGNFQLEGHLKQ 279

Query: 381  INTNYLSKINPYQHHRSSTAVLPEPAWDKPRQLHIHGRHDPLASEN--QSHIAIAYKCAV 438
            I+   LSK   +Q    STAV  +P WDKPR+ HI    D LA+E   Q+ +++++    
Sbjct: 280  IHEEALSK---FQRLEQSTAVPAQPHWDKPREFHITCGPDSLATETAKQTTVSVSFLLPD 336

Query: 439  MDNFKDVFVLNILGDLLLKGPNAPFYKNLVESGLGLSFSPVTGYEASIHDTLFTVGLQGV 498
            + +  + F L++L  LL+ GPN+PFYK L+ESGLG  FSP  GY     +  F+VGLQG+
Sbjct: 337  ITDTFEAFTLSLLSSLLIAGPNSPFYKALIESGLGTDFSPDVGYNGYTREAYFSVGLQGI 396

Query: 499  DSNKFDEIIGAVNKTIDEVIAEGFDKERVAIGLQGVDSNKFDEIKGAVNKTIDEVIAEGF 558
                   +   V++TI+EVI +GF                                    
Sbjct: 397  AEKDVKTVRELVDRTIEEVIEKGF------------------------------------ 420

Query: 559  DKERVASVLHSLELSLKHQSSNFGLNLLFWLVPFMNHDCDVIHLLHINDRLNWFKKHIQE 618
            + +R+ ++LH +E+  KHQS++FGL L  ++    NHD D + LL I  +L  F+K ++E
Sbjct: 421  EDDRIEALLHKIEIQTKHQSASFGLTLTSYIASCWNHDGDPVELLQIGSQLTRFRKCLKE 480

Query: 619  NPTYLQEKVDEYLRNNPHKLIITMSPEKTFDEKLDKVEKDILKDRISQMNDQDLNKVYVN 678
            NP +LQEKV++Y +NN HKL ++M P+  + EK  ++E + L+ +++ ++  D  ++Y  
Sbjct: 481  NPKFLQEKVEQYFKNNQHKLTLSMKPDDKYYEKQTQMETEKLEQKVNSLSPADKQQIYEK 540

Query: 679  GTELRKEQEKEQNIDVLPTLKISDVDDHVERV-VTTDKHILQVPIQLSTQPTNGVTYFRS 737
            G EL+ +Q K Q+   LP LK+SD++  +    +        +P+Q   QPTNG+ YFR+
Sbjct: 541  GLELQTQQSKHQDASCLPALKVSDIEPSMPFTKLDIGLAAGDIPVQYCPQPTNGMVYFRA 600

Query: 738  VVDTSKLSPELKPLVPLFNYVINQMRTKNYDFREMDQLIHMSTGGISFNSHLGESCSTPN 797
                + L  +L+P+VPLF  V+ ++     ++RE  Q I + TGG+S   H+    S  +
Sbjct: 601  FSSLNTLPEDLRPIVPLFCSVLTKLGCGILNYREQAQQIELKTGGMSVTPHVLPDDSQLD 660

Query: 798  GFEEAILVSSHCLEHNNDKMFDVLSELFNNVQLTDLNRFTTLVNTLSSELINGISGNGHR 857
             +E+ +L SS CLE N   M  + SE+FNN    +   F  LV   + EL NGIS +GH 
Sbjct: 661  TYEQGVLFSSLCLERNLPDMMHLWSEIFNNPCFEEEEHFKVLVKMTAQELSNGISDSGHL 720

Query: 858  YAMSIASSLVDPVSEQKEIYSGLSFVSKIKEIAQSPKLENILQDIQSIGAHVLRKDSMRC 917
            YA   AS  + P  + +E +SG+  V  +K IA+   ++ IL+ +  I  ++L  D+MRC
Sbjct: 721  YAALRASKTLTPSGDLQETFSGMDQVKVMKRIAEMTDIKPILRKLPRIKKYLLNCDNMRC 780

Query: 918  ALNMSAQS--NAPERLESFLQSIPGDFTSQ------------PGQTVHSFNVSGIQ---- 959
            ++N + Q    A + +E+FL+++      +            P     + +VSG Q    
Sbjct: 781  SVNATPQQMPQAEKEVENFLRNVGRSKKERKPVRPHIVEKPTPSGPSGAAHVSGSQIVRK 840

Query: 960  ------------KVSHVLPFPVNFTAKSLRGVPFLHKDYVALKVLSKFLTTKYLLREVRE 1007
                        K   VLPFPVN+  + +R VP+   D+ +LK+L++ +T K+L  E+RE
Sbjct: 841  LVTDPTFKPCQMKTHFVLPFPVNYIGECVRTVPYADPDHASLKILARLMTAKFLHTEIRE 900

Query: 1008 KNGAYGAGAVVSPSGVIQFYSYRDPYALETLATFDQSTQFLADTKLSVQDLDEAKLGVFK 1067
            K GAYG GA ++ SG+   YSYRDP ++ETL +F ++  +    K + QD+DEAKL VF 
Sbjct: 901  KGGAYGGGAKLTHSGIFTLYSYRDPNSIETLQSFGKAVDWAKSGKFTQQDIDEAKLSVFS 960

Query: 1068 EVDAPIPPGSKGMSKFLYGKTDEMIEQYRLSVKQVTEDDIRRVADTYLSRDATEKLSSYV 1127
             VD+P+ P  KGM  FLYG +DEM + YR  +  V  D +  V+  YL     +      
Sbjct: 961  TVDSPVAPSDKGMDHFLYGLSDEMKQAYREQLFAVNHDKLTSVSHKYLG--IGKSTHGLA 1018

Query: 1128 VIGPKSNNLGDE--WKI 1142
            ++GP+++ +  +  W I
Sbjct: 1019 ILGPENSKIAKDPSWII 1035

ATP-independent protease that degrades mitochondrial transit peptides after their cleavage. Also degrades other unstructured peptides. Specific for peptides in the range of 10 to 65 residues. Shows a preference for cleavage after small polar residues and before basic residues, but without any positional preference.
Mus musculus (taxid: 10090)
EC: 3EC: .EC: 4EC: .EC: 2EC: 4EC: .EC: -

>sp\|Q6PF24\|PREP_XENLA Presequence protease, mitochondrial OS=Xenopus laevis GN=pitrm1 PE=2 SV=1	Back alignment and function description

>sp\|Q28BR5\|PREP_XENTR Presequence protease, mitochondrial OS=Xenopus tropicalis GN=pitrm1 PE=2 SV=1	Back alignment and function description

>sp\|Q5RDG3\|PREP_PONAB Presequence protease, mitochondrial OS=Pongo abelii GN=PITRM1 PE=2 SV=1	Back alignment and function description

>sp\|Q5JRX3\|PREP_HUMAN Presequence protease, mitochondrial OS=Homo sapiens GN=PITRM1 PE=1 SV=2	Back alignment and function description

>sp\|Q9V9E3\|PREP_DROME Presequence protease, mitochondrial OS=Drosophila melanogaster GN=CG3107 PE=2 SV=2	Back alignment and function description

>sp\|Q7ZVZ6\|PREP_DANRE Presequence protease, mitochondrial OS=Danio rerio GN=pitrm1 PE=2 SV=1	Back alignment and function description

>sp\|Q6C0U8\|CYM1_YARLI Mitochondrial presequence protease OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=CYM1 PE=3 SV=1	Back alignment and function description

>sp\|Q4IA56\|CYM1_GIBZE Mitochondrial presequence protease OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=CYM1 PE=3 SV=1	Back alignment and function description

>sp\|Q7S7C0\|CYM1_NEUCR Mitochondrial presequence protease OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=cym-1 PE=3 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1147
110765046		1006	PREDICTED: presequence protease, mitocho	0.838	0.956	0.458	0.0
380028940		1005	PREDICTED: presequence protease, mitocho	0.837	0.956	0.461	0.0
383848119		1035	PREDICTED: presequence protease, mitocho	0.843	0.935	0.457	0.0
350398101		1050	PREDICTED: presequence protease, mitocho	0.836	0.913	0.459	0.0
307170760		1033	Presequence protease, mitochondrial [Cam	0.854	0.948	0.448	0.0
322794499		1036	hypothetical protein SINV_07097 [Solenop	0.832	0.921	0.450	0.0
156543235		1035	PREDICTED: presequence protease, mitocho	0.833	0.923	0.449	0.0
332017620		1009	Presequence protease, mitochondrial [Acr	0.811	0.922	0.446	0.0
307195668		1025	Presequence protease, mitochondrial [Har	0.835	0.934	0.448	0.0
193627248		1002	PREDICTED: presequence protease, mitocho	0.843	0.966	0.439	0.0

>gi\|110765046\|ref\|XP_397099.3\| PREDICTED: presequence protease, mitochondrial [Apis mellifera]	Back alignment and taxonomy information

 Score =  932 bits (2410), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 466/1016 (45%), Positives = 668/1016 (65%), Gaps = 54/1016 (5%)

Query: 139  HSFEEGAEVEGFLVKNVTPIPEFQMTAIKLQHVKTLAEYFHLSRDDSNNVFAVAFRTPPP 198
            + F+ G  + GF+V  +  I E  +TA++L H+ T A+Y HL+RDDSNNVF+V FRT P 
Sbjct: 20   NQFKTGQIINGFIVDEIAKIDEVYLTAVRLSHLGTGAQYLHLARDDSNNVFSVGFRTTPK 79

Query: 199  DSTGITHILEHLSLCGSVKYPCRDPFMKMLTRSMATFMNAMTGPDYTFYPFSSQNHCDYF 258
            DSTG+ HILEH +LCGS +YPCRDPF KML RS+ATFMNAMTGPDYT YPFS+QN  DY 
Sbjct: 80   DSTGLPHILEHTTLCGSERYPCRDPFFKMLRRSLATFMNAMTGPDYTIYPFSTQNLKDYQ 139

Query: 259  NLMSIYLDAVFNPQLKQLDFMQEGWRLEHEDIKDQNSPIIFKGVVFNEMKGAFSDNSYIF 318
            NL S+YLD+VF P L++LDF QEGWRLEH D+ D+NSPIIFKGVVFNEMKG F++N  I 
Sbjct: 140  NLQSVYLDSVFRPYLRELDFKQEGWRLEHADVNDKNSPIIFKGVVFNEMKGVFNENQTIL 199

Query: 319  GEALMNNILPTYCYKHVSGGDPIKILNLKYENLVNYHKKHYHPTNSKFFSYGNFNLEDHL 378
             E  +N+ILP++ Y  +SGGDP+ I  LKY +L+N+H+ +YHP+NS+F+SYGNF+LE+HL
Sbjct: 200  AEKFLNHILPSHTYAVISGGDPLVIPTLKYIDLLNFHQTYYHPSNSRFYSYGNFSLENHL 259

Query: 379  SFINTNYLSKINPYQHHRSSTAVLPEPAWDKPRQLHIHGRHDPLASE--NQSHIAIAYKC 436
             FIN  YL  ++      S + V  E  WD PR+ HI  R DP+A++   Q  IAI Y C
Sbjct: 260  KFINERYLFLMDNID--TSISEVPSEKRWDNPRKEHITCRSDPMAADPSRQGSIAIGYLC 317

Query: 437  AVMDNFKDVFVLNILGDLLLKGPNAPFYKNLVESGLGLSFSPVTGYEASIHDTLFTVGLQ 496
              + + +  F +NIL  LLL+GPN+ FYK+LVES LG +F  +TG+++   DT+F V L 
Sbjct: 318  NDITDVQKTFEINILSQLLLRGPNSAFYKSLVESKLGTAFGSMTGFDSQCKDTMFIVSLL 377

Query: 497  GVDSNKFDEIIGAVNKTIDEVIAEGFDKERVAIGLQGVDSNKFDEIKGAVNKTIDEVIAE 556
            G     F++        ID+V                             NKT+ +V+ E
Sbjct: 378  GTKPEDFEK--------IDDVF----------------------------NKTVQKVVEE 401

Query: 557  GFDKERVASVLHSLELSLKHQSSNFGLNLLFWLVPFMNHDCDVIHLLHINDRLNWFKKHI 616
            GF ++ V +VLHS+EL LKHQ+SNFGL LLF L P  NH+ D+I  + IND +  F++ I
Sbjct: 402  GFIEDHVEAVLHSIELQLKHQTSNFGLQLLFNLTPLWNHNGDLIQSMRINDAIRKFREEI 461

Query: 617  QENPTYLQEKVDEYLRNNPHKLIITMSPEKTFDEKLDKVEKDILKDRISQMNDQDLNKVY 676
            + NP YLQE V  YL +N H+L +TM P + +D +    E+ +L+ ++ +++ +++  +Y
Sbjct: 462  KNNPIYLQELVKTYLMDNNHRLTLTMLPYEKYDYEKAIAEQKLLESKLKELSKEEIEHIY 521

Query: 677  VNGTELRKEQEKEQNIDVLPTLKISDVDDHVERVVTTDKHILQVPIQLSTQPTNGVTYFR 736
            + G  L +EQ+++++++VLPTLKI D+ + VER    +K ++ VP+Q++T+PTNGV Y+R
Sbjct: 522  IYGKILLEEQQRQEDVNVLPTLKIEDIKEDVERYKLENKKVIDVPLQIATEPTNGVCYYR 581

Query: 737  SVVDTSKLSPELKPLVPLFNYVINQMRTKNYDFREMDQLIHMSTGGISFNSHLGESCSTP 796
             +++T  L+ ELKPL+PLFN +I++M TKNYD+R  DQ+I + TGG++F +H+ E  +  
Sbjct: 582  GILNTQGLAQELKPLLPLFNNIISKMGTKNYDYRNFDQMIRLKTGGLNFMNHIAEHKNNL 641

Query: 797  NGFEEAILVSSHCLEHNNDKMFDVLSELFNNVQLTDLNRFTTLVNTLSSELINGISGNGH 856
              +EE IL+ S+CL+ N + M+ +  ELFNNVQL+D+ RFTTLV   + +LINGI+  GH
Sbjct: 642  LQYEEGILIESYCLDRNINDMWRLWLELFNNVQLSDIERFTTLVKINAVDLINGIADLGH 701

Query: 857  RYAMSIASSLVDPVSEQKEIYSGLSFVSKIKEIAQSPKLENILQDIQSIGAHVLRKDSMR 916
             YAMS A+SLV PV++ KE  SGL +VS +K+IAQ P L  +L  +Q I  ++L K  +R
Sbjct: 702  TYAMSSAASLVSPVTKYKESLSGLQYVSNMKKIAQMPDLSPVLNQMQEISDYILNKQYLR 761

Query: 917  CALNMSAQSN-----APERLESFLQSIPGDFTSQPGQTVHSFNVS-GIQKVSHVLPFPVN 970
             A+N+   +      +  +  S L+  P D  +      H  N+  G + + +VLP+ VN
Sbjct: 762  SAINLCKNNKDMILESVTKFYSLLKGTPKDIYT----FTHDQNLEIGDRAIHYVLPYSVN 817

Query: 971  FTAKSLRGVPFLHKDYVALKVLSKFLTTKYLLREVREKNGAYGAGAVVSPSGVIQFYSYR 1030
            +TAK++  VP+   D+  L+VLSK +T+ YL  E+REK GAYG GA +S  G+  FYSYR
Sbjct: 818  YTAKTIFTVPYTSPDFAPLRVLSKLITSLYLHPEIREKGGAYGGGATLSSDGIFAFYSYR 877

Query: 1031 DPYALETLATFDQSTQFLADTKLSVQDLDEAKLGVFKEVDAPIPPGSKGMSKFLYGKTDE 1090
            DP +  TL  F+++ +FL    LS  D+DEAKLG+F+  DAP+ P ++GM +F Y  TD+
Sbjct: 878  DPNSTRTLDLFEKTYEFLLKQSLSQSDIDEAKLGIFQHFDAPVSPSNRGMIQFKYNLTDD 937

Query: 1091 MIEQYRLSVKQVTEDDIRRVADTYLSRDATEKLSSYVVIGPKSNNL----GDEWKI 1142
             I++ R  +K VT+D +  VA  YL  D         +IGP +++L     + WK+
Sbjct: 938  DIQEQRERLKAVTKDQLIHVATKYLQPDQKHIRVGRALIGPVNHDLLNRPSENWKV 993

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi\|380028940\|ref\|XP_003698141.1\| PREDICTED: presequence protease, mitochondrial-like [Apis florea]	Back alignment and taxonomy information

>gi\|383848119\|ref\|XP_003699699.1\| PREDICTED: presequence protease, mitochondrial-like [Megachile rotundata]	Back alignment and taxonomy information

>gi\|350398101\|ref\|XP_003485088.1\| PREDICTED: presequence protease, mitochondrial-like isoform 1 [Bombus impatiens] gi\|350398104\|ref\|XP_003485089.1\| PREDICTED: presequence protease, mitochondrial-like isoform 2 [Bombus impatiens]	Back alignment and taxonomy information

>gi\|307170760\|gb\|EFN62885.1\| Presequence protease, mitochondrial [Camponotus floridanus]	Back alignment and taxonomy information

>gi\|322794499\|gb\|EFZ17552.1\| hypothetical protein SINV_07097 [Solenopsis invicta]	Back alignment and taxonomy information

>gi\|156543235\|ref\|XP_001606570.1\| PREDICTED: presequence protease, mitochondrial-like [Nasonia vitripennis]	Back alignment and taxonomy information

>gi\|332017620\|gb\|EGI58317.1\| Presequence protease, mitochondrial [Acromyrmex echinatior]	Back alignment and taxonomy information

>gi\|307195668\|gb\|EFN77510.1\| Presequence protease, mitochondrial [Harpegnathos saltator]	Back alignment and taxonomy information

>gi\|193627248\|ref\|XP_001952705.1\| PREDICTED: presequence protease, mitochondrial-like [Acyrthosiphon pisum]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1147
UNIPROTKB\|E1C9F5		1033	PITRM1 "Uncharacterized protei	0.341	0.379	0.488	7.7e-227
UNIPROTKB\|F1NGG7		1032	PITRM1 "Uncharacterized protei	0.341	0.379	0.488	7.7e-227
UNIPROTKB\|F1P2D3		1038	PITRM1 "Uncharacterized protei	0.341	0.377	0.488	7.7e-227
UNIPROTKB\|Q5JRX3		1037	PITRM1 "Presequence protease,	0.340	0.377	0.5	1.4e-223
UNIPROTKB\|Q5RDG3		1037	PITRM1 "Presequence protease,	0.340	0.377	0.502	1.8e-223
UNIPROTKB\|C9JSL2		1038	PITRM1 "Presequence protease,	0.340	0.376	0.502	6.2e-223
ZFIN\|ZDB-GENE-040426-2876		1023	pitrm1 "pitrilysin metalloprot	0.338	0.379	0.481	3.1e-217
FB\|FBgn0033005		1034	CG3107 [Drosophila melanogaste	0.524	0.582	0.360	1.6e-208
RGD\|1310998		954	Pitrm1 "pitrilysin metallopept	0.253	0.305	0.557	2.7e-199
UNIPROTKB\|E7ES23		939	PITRM1 "Presequence protease,	0.330	0.403	0.507	8.3e-194

UNIPROTKB\|E1C9F5 PITRM1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

 Score = 1046 (373.3 bits), Expect = 7.7e-227, Sum P(3) = 7.7e-227
 Identities = 194/397 (48%), Positives = 269/397 (67%)

Query:   141 FEEGAEVEGFLVKNVTPIPEFQMTAIKLQHVKTLAEYFHLSRDDSNNVFAVAFRTPPPDS 200
             +  G ++ GF V  VT +PE  +TA+KL H  T A Y H++R+DSNN+F++ FRT P DS
Sbjct:    37 YRVGEQIHGFTVTQVTAVPELFLTAVKLSHDSTGARYLHVAREDSNNLFSLQFRTTPMDS 96

Query:   201 TGITHILEHLSLCGSVKYPCRDPFMKMLTRSMATFMNAMTGPDYTFYPFSSQNHCDYFNL 260
             TG+ HILEH  LCGS +YPCRDPF KML RS++TFMNA T  DYT YPFS+QN  D+ NL
Sbjct:    97 TGVPHILEHTVLCGSQQYPCRDPFFKMLNRSLSTFMNAFTASDYTLYPFSTQNPKDFRNL 156

Query:   261 MSIYLDAVFNPQLKQLDFMQEGWRLEHEDIKDQNSPIIFKGVVFNEMKGAFSDNSYIFGE 320
             +S+YLDA F P L+QLDF QEGWRLEHE+  D  +P+IFKGVVFNEMKGAF+DN  +F +
Sbjct:   157 LSVYLDAAFFPCLRQLDFWQEGWRLEHENPTDPQTPLIFKGVVFNEMKGAFTDNERVFAQ 216

Query:   321 ALMNNILPTYCYKHVSGGDPIKILNLKYENLVNYHKKHYHPTNSKFFSYGNFNLEDHLSF 380
              L N +LP + Y  VSGG P+ I +L +E L  +H  HYHP+NS+FF+YGNF LE HL  
Sbjct:   217 HLQNKLLPDHTYGVVSGGHPLSIPDLTWEQLKQFHASHYHPSNSRFFTYGNFPLEHHLKQ 276

Query:   381 INTNYLSKINPYQHHRSSTAVLPEPAWDKPRQLHIHGRHDPLASE--NQSHIAIAYKCAV 438
             I+   L K   ++   S T +  +  W+KP++ HI    D  AS+   Q+ ++++Y    
Sbjct:   277 IHEEALVK---FERIESKTDIPKQKIWEKPQEHHITCGLDSFASDPSKQTTVSVSYLLTD 333

Query:   439 MDNFKDVFVLNILGDLLLKGPNAPFYKNLVESGLGLSFSPVTGYEASIHDTLFTVGLQGV 498
             + +  + F L++L  LL+ GPN+PFYK L+ESG+G  FSP  G+  S  +  F+VGLQG+
Sbjct:   334 ITDVFETFTLSLLSSLLVDGPNSPFYKALIESGVGTDFSPDVGFNGSTREAYFSVGLQGI 393

Query:   499 DSNKFDEIIGAVNKTIDEVIAEGFDKERVAIGLQGVD 535
                  + +   + +T+DEVIA+GF+++R+   L  ++
Sbjct:   394 AERDIETVKQIIARTVDEVIAKGFEEDRIEALLHKIE 430

GO:0003824 "catalytic activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB\|F1NGG7 PITRM1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

UNIPROTKB\|F1P2D3 PITRM1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

UNIPROTKB\|Q5JRX3 PITRM1 "Presequence protease, mitochondrial" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|Q5RDG3 PITRM1 "Presequence protease, mitochondrial" [Pongo abelii (taxid:9601)]	Back alignment and assigned GO terms

UNIPROTKB\|C9JSL2 PITRM1 "Presequence protease, mitochondrial" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-040426-2876 pitrm1 "pitrilysin metalloproteinase 1" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

FB\|FBgn0033005 CG3107 [Drosophila melanogaster (taxid:7227)]	Back alignment and assigned GO terms

RGD\|1310998 Pitrm1 "pitrilysin metallopeptidase 1" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

UNIPROTKB\|E7ES23 PITRM1 "Presequence protease, mitochondrial" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6FUI7	CYM1_CANGA	3, ., 4, ., 2, 4, ., -	0.3483	0.8221	0.9525	yes	N/A
Q28BR5	PREP_XENTR	3, ., 4, ., 2, 4, ., -	0.3847	0.8491	0.9483	yes	N/A
Q5RDG3	PREP_PONAB	3, ., 4, ., 2, 4, ., -	0.3988	0.8413	0.9305	yes	N/A
Q5JRX3	PREP_HUMAN	3, ., 4, ., 2, 4, ., -	0.3969	0.8413	0.9305	yes	N/A
Q8K411	PREP_MOUSE	3, ., 4, ., 2, 4, ., -	0.4030	0.8378	0.9276	yes	N/A
Q8VY06	PREP2_ARATH	3, ., 4, ., 2, 4, ., -	0.2910	0.8282	0.8796	yes	N/A
Q7ZVZ6	PREP_DANRE	3, ., 4, ., 2, 4, ., -	0.3929	0.8299	0.9305	yes	N/A
Q6C0U8	CYM1_YARLI	3, ., 4, ., 2, 4, ., -	0.3431	0.8221	0.9525	yes	N/A
Q9V9E3	PREP_DROME	3, ., 4, ., 2, 4, ., -	0.3980	0.8317	0.9226	yes	N/A
P32898	CYM1_YEAST	3, ., 4, ., 2, 4, ., -	0.3392	0.8256	0.9575	yes	N/A
Q759T9	CYM1_ASHGO	3, ., 4, ., 2, 4, ., -	0.3343	0.8317	0.9636	yes	N/A
Q6CWW6	CYM1_KLULA	3, ., 4, ., 2, 4, ., -	0.3333	0.8151	0.9521	yes	N/A
Q4WP38	CYM1_ASPFU	3, ., 4, ., 2, 4, ., -	0.3198	0.8273	0.8910	yes	N/A
Q4IA56	CYM1_GIBZE	3, ., 4, ., 2, 4, ., -	0.3495	0.8282	0.9462	yes	N/A
Q6BTC0	CYM1_DEBHA	3, ., 4, ., 2, 4, ., -	0.3252	0.8134	0.8777	yes	N/A
Q5B6H7	CYM1_EMENI	3, ., 4, ., 2, 4, ., -	0.3368	0.8256	0.9027	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.4.24	0.691

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Alignment Graph	Length	Definition	E-value
Query		1147
COG1026		978	COG1026, COG1026, Predicted Zn-dependent peptidase	0.0
PTZ00432		1119	PTZ00432, PTZ00432, falcilysin; Provisional	1e-101
pfam08367		248	pfam08367, M16C_assoc, Peptidase M16C associated	8e-67
pfam05193		182	pfam05193, Peptidase_M16_C, Peptidase M16 inactive	3e-22
COG0612		438	COG0612, PqqL, Predicted Zn-dependent peptidases [	7e-15
pfam05193		182	pfam05193, Peptidase_M16_C, Peptidase M16 inactive	2e-07
COG1025		937	COG1025, Ptr, Secreted/periplasmic Zn-dependent pe	6e-07
COG0612		438	COG0612, PqqL, Predicted Zn-dependent peptidases [	1e-04
pfam00675		149	pfam00675, Peptidase_M16, Insulinase (Peptidase fa	4e-04

>gnl\|CDD\|223957 COG1026, COG1026, Predicted Zn-dependent peptidases, insulinase-like [General function prediction only]	Back alignment and domain information

 Score =  706 bits (1824), Expect = 0.0
 Identities = 333/1002 (33%), Positives = 523/1002 (52%), Gaps = 70/1002 (6%)

Query: 149  GFLVKNVTPIPEFQMTAIKLQHVKTLAEYFHLSRDDSNNVFAVAFRTPPPDSTGITHILE 208
            GF V +   +PE       L+H KT AE  H+  +D NNVF++AF+T P DSTG+ HILE
Sbjct: 5    GFKVISSEDLPEISSKGYILEHEKTGAELAHIKNEDPNNVFSIAFKTEPHDSTGVAHILE 64

Query: 209  HLSLCGSVKYPCRDPFMKMLTRSMATFMNAMTGPDYTFYPFSSQNHCDYFNLMSIYLDAV 268
            H  LCGS KYP +DPF KML RS+ TF+NA T PD T YP SS N  D++NL+S+YLDAV
Sbjct: 65   HTVLCGSKKYPVKDPFFKMLKRSLNTFLNAFTFPDKTVYPASSANEKDFYNLLSVYLDAV 124

Query: 269  FNPQLKQLDFMQEGWRLEHEDIKDQNSPIIFKGVVFNEMKGAFSDNSYIFGEALMNNILP 328
            F+P L +  F+QEGWR+E +D     S + +KGVV+NEMKGA+S    +   A+  ++ P
Sbjct: 125  FHPLLTKESFLQEGWRIEFKDE----SNLKYKGVVYNEMKGAYSSGESVLSRAMQQSLFP 180

Query: 329  TYCYKHVSGGDPIKILNLKYENLVNYHKKHYHPTNSKFFSYGNFNLEDHLSFINTNYLSK 388
               Y   SGGDP  I +L YE    +HKKHYHP+N K F YGN   E  L FI    L  
Sbjct: 181  GTTYGVNSGGDPKNIPDLTYEEFRAFHKKHYHPSNCKIFVYGNIPTERLLDFIEEKVLR- 239

Query: 389  INPYQHHRSSTAVLPEPAWDKPRQLHIHGRHD-PLASENQSHIAIAYKCAVMDNFKDVFV 447
              P+        +  + A+ KPR+  +          E+Q  +++++      + +D   
Sbjct: 240  --PFGKRELDVPIPDQKAFKKPRRKVLEYPISFDEEDEDQGLLSLSWLGGSASDAEDSLA 297

Query: 448  LNILGDLLLKGPNAPFYKNLVESGLGLSFSPVTG-YEASIHDTLFTVGLQGVDSNKFDEI 506
            L +L ++LL    +P  + L+ESGLG  F+ V+G Y++ + +T+F+V             
Sbjct: 298  LEVLEEILLDSAASPLTQALIESGLG--FADVSGSYDSDLKETIFSV------------- 342

Query: 507  IGAVNKTIDEVIAEGFDKERVAIGLQGVDSNKFDEIKGAVNKTIDEVIAEGFDKERVASV 566
                                   GL+GV   K  ++K  V  T+ E++  G DK+ + ++
Sbjct: 343  -----------------------GLKGVSEEKIAKLKNLVLSTLKELVKNGIDKKLIEAI 379

Query: 567  LHSLELSLKH-QSSNFGLNLLFWLVPFMNHDCDVIHLLHINDRLNWFKKHIQENPTYLQE 625
            LH LE SLK  +S  FGL L+F  +    +  D    L   D L   ++ +++ P Y ++
Sbjct: 380  LHQLEFSLKEVKSYPFGLGLMFRSLYGWLNGGDPEDSLRFLDYLQNLREKLEKGP-YFEK 438

Query: 626  KVDEYLRNNPHKLIITMSPEKTFDEKLDKVEKDILKDRISQMNDQDLNKVYVNGTELRKE 685
             + +Y  +NPH + + + P    +EKL+K E+++L+ R S++ D+DL K+  +  +L++ 
Sbjct: 439  LIRKYFLDNPHYVTVIVLPSPELEEKLEKEERELLQKRSSELTDEDLEKIIKDSKKLKER 498

Query: 686  QEK---EQNIDVLPTLKISDVDDHVERVVTTDKHILQVPIQLSTQPTNGVTYFRSVVDTS 742
            Q++   E+++  LPTLK+ DV D +E+     +   +  +      TNG+TY R   D  
Sbjct: 499  QDQPDSEEDLATLPTLKLGDVPDPIEKTSLETEVSNEAKVLHHDLFTNGITYLRLYFDLD 558

Query: 743  KLSPELKPLVPLFNYVINQMRTKNYDFREMDQLIHMSTGGISFNSHLGESCSTPNGFEEA 802
             L  EL P +PLF + +  + T+ Y ++E+   I   TGGIS +  +         +  +
Sbjct: 559  MLPSELLPYLPLFAFALTNLGTETYSYKELLNQIERHTGGISVSLSVDTDPGDDGEYRPS 618

Query: 803  ILVSSHCLEHNNDKMFDVLSELFNNVQLTDLNRFTTLVNTLSSELINGISGNGHRYAMSI 862
              +S   L    +K+F+++ E+  N    D  R   L+    S+L + +  +GH  A S+
Sbjct: 619  FSISGKALRSKVEKLFELIREILANTDFHDRERLKELLEQYLSDLTSSVRNSGHSIASSL 678

Query: 863  ASSLVDPVSEQKEIYSGLSFVSKIKEI----AQSPKLENILQDIQSIGAHVLRKDSMRCA 918
            A+S +      KE+ +GLS V  ++E+     ++ + E I   +Q++   + + +++R A
Sbjct: 679  ANSRLSSAGALKELLNGLSQVKFLRELSSNFEENFEKE-IADKLQALRKKIFQTNNLRIA 737

Query: 919  LNMSAQSNAPERLES----FLQSIPGDFT--SQPGQTVHSFNVSGIQKVSHVLPFPVNFT 972
            + +       + LE+    FL+ +   F   + P         S  +      P   N  
Sbjct: 738  I-IGDIDKILDLLENPLLKFLEHLLPGFELPTPPKNPHLDLISSLSEATIIPSPVAYNAL 796

Query: 973  AKSLRGVPFLHKDYVALKVLSKFLTTKYLLREVREKNGAYGAGAVVSP-SGVIQFYSYRD 1031
            A S+ G+P+ H DY AL+VLS++L + YL  ++REK GAYGA A +    GV  F SYRD
Sbjct: 797  AFSIGGLPYTHPDYAALQVLSEYLGSGYLWNKIREKGGAYGASASIDANRGVFSFASYRD 856

Query: 1032 PYALETLATFDQSTQFLADTKLSVQDLDEAKLGVFKEVDAPIPPGSKGMSKFLY---GKT 1088
            P  L+T   F +S + LA      +DL+EA LG+   +D P  P S+G   F     G T
Sbjct: 857  PNILKTYKVFRKSVKDLASGNFDERDLEEAILGIISTLDTPESPASEGSKSFYRDLSGLT 916

Query: 1089 DEMIEQYRLSVKQVTEDDIRRVADTYLSRDATEKLSSYVVIG 1130
            DE  + +R  +  VT++DI+ V D YL   ++E   S  V  
Sbjct: 917  DEERQAFRERLLDVTKEDIKEVMDKYLLNFSSEN--SIAVFA 956

Length = 978

>gnl\|CDD\|240416 PTZ00432, PTZ00432, falcilysin; Provisional	Back alignment and domain information

>gnl\|CDD\|116948 pfam08367, M16C_assoc, Peptidase M16C associated	Back alignment and domain information

>gnl\|CDD\|218490 pfam05193, Peptidase_M16_C, Peptidase M16 inactive domain	Back alignment and domain information

>gnl\|CDD\|223685 COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only]	Back alignment and domain information

>gnl\|CDD\|218490 pfam05193, Peptidase_M16_C, Peptidase M16 inactive domain	Back alignment and domain information

>gnl\|CDD\|223956 COG1025, Ptr, Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>gnl\|CDD\|223685 COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only]	Back alignment and domain information

>gnl\|CDD\|216056 pfam00675, Peptidase_M16, Insulinase (Peptidase family M16)	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		1147
2fge_A		995	Crystal Structure Of Presequence Protease Prep From		6e-95
3s5h_A		1193	Crystal Structures Of Falcilysin, A M16 Metalloprot		4e-60

>pdb|2FGE|A Chain A, Crystal Structure Of Presequence Protease Prep From Arabidopsis Thaliana Length = 995

Back alignment and structure

Iteration: 1

Score = 345 bits (886), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 289/1001 (28%), Positives = 458/1001 (45%), Gaps = 88/1001 (8%) Query: 142 EEGAEVEGFLVKNVTPIPEFQMTAIKLQHVKTLAEYFHLSRDDSNNVFAVAFRTPPPDST 201 ++ AE GF + I E + AI +H KT E +S +D N VF V FRTPP DST Sbjct: 14 QDEAEKLGFEKVSEEFISECKSKAILFKHKKTGCEVXSVSNEDENKVFGVVFRTPPKDST 73 Query: 202 GITHILEHLSLCGSVKYPCRDPFMKMLTRSMATFMNAMTGPDYTFYPFSSQNHCDYFNLM 261 GI HIL+H LCGS KYP ++PF+++L S+ TF+NA T PD T YP +S N D++NL+ Sbjct: 74 GIPHILQHSVLCGSRKYPVKEPFVELLKGSLHTFLNAFTYPDRTCYPVASTNTKDFYNLV 133 Query: 262 SIYLDAVFNPQL--KQLDFMQEGWRLEHEDIKDQNSPIIFKGVVFNEMKGAFSDNSYIFG 319 +YLDAVF P+ F QEGW H ++ D + I +KGVVFNE KG +S I G Sbjct: 134 DVYLDAVFFPKCVDDAHTFQQEGW---HYELNDPSEDISYKGVVFNEXKGVYSQPDNILG 190 Query: 320 EALMNNILPTYCYKHVSGGDPIKILNLKYENLVNYHKKHYHPTNSKFFSYGNFNLEDHLS 379 + P Y SGGDP I NL +E +H+++YHP+N++ + YG+ + L Sbjct: 191 RIAQQALSPENTYGVDSGGDPKDIPNLTFEEFKEFHRQYYHPSNARIWFYGDDDPVHRLR 250 Query: 380 FINTNYLSKINPYQHHRSSTAVLPEPAWDKPRQL---HIHGRHDPLASENQSHIAIAYKC 436 + + YL SS + + +P +L + GR L ++ + Sbjct: 251 VL-SEYLDXFEASPSPNSSKIKF-QKLFSEPVRLVEKYPAGRDGDLKKKHXLCVNWLLSE 308 Query: 437 AVMDNFKDVFVLNILGDLLLKGPNAPFYKNLVESGLGLSFSPVTGYEASIHDTLFTVGLQ 496 +D + L L L L P +P K L+ESGLG + +G + F +GL+ Sbjct: 309 KPLD-LQTQLALGFLDHLXLGTPASPLRKILLESGLGEALVS-SGLSDELLQPQFGIGLK 366 Query: 497 GVDSNKFDEIIGAVNKTIDEVIAEGFDKERVAIGLQGVDSNKFDEIKGAVNKTIDEVIAE 556 GV ++ + T+ ++ EGFD D ++ + N Sbjct: 367 GVSEENVQKVEELIXDTLKKLAEEGFDN---------------DAVEASXN--------- 402 Query: 557 GFDKERVASVLHSLELSLKHQSSN---FGLNLLFWLVPFMNHDCDVIHLLHINDRLNWFK 613 ++E SL+ ++ GL+L + +D D L + L K Sbjct: 403 ------------TIEFSLRENNTGSFPRGLSLXLQSISKWIYDXDPFEPLKYTEPLKALK 450 Query: 614 KHIQE--NPTYLQEKVDEYLRNNPHKLIITMS--PEKTFDEKLDKVEKDILKDRISQMND 669 I E + +++ + NN H++ I PEK E+++ EK+IL+ + + Sbjct: 451 TRIAEEGSKAVFSPLIEKLILNNSHRVTIEXQPDPEKATQEEVE--EKNILEKVKAAXTE 508 Query: 670 QDLNKVYVNGTELRKEQEK---EQNIDVLPTLKISDVDDHVERVVTTDKHILQVPIQLST 726 +DL ++ EL+ +QE + + +P+L + D+ V T I V + Sbjct: 509 EDLAELARATEELKLKQETPDPPEALRCVPSLNLGDIPKEPTYVPTEVGDINGVKVLRHD 568 Query: 727 QPTNGVTYFRSVVDTSKLSPELKPLVPLFNYVINQMRTKNYDFREMDQLIHMSTGGISF- 785 TN + Y V D L EL PLVPLF + + TK+ F +++QLI TGGIS Sbjct: 569 LFTNDIIYTEVVFDIGSLKHELLPLVPLFCQSLLEXGTKDLTFVQLNQLIGRKTGGISVY 628 Query: 786 ---NSHLG--ESCSTPNGFEEAILVSSHCLEHNNDKMFDVLSELFNNVQLTDLNRFTTLV 840 +S G E CS I+V D +F++ + L VQ TD RF V Sbjct: 629 PLTSSVRGKDEPCS-------KIIVRGKSXAGRADDLFNLXNCLLQEVQFTDQQRFKQFV 681 Query: 841 NTLSSELINGISGNGHRYAMSIASSLVDPVSEQKEIYSGLSFVSKIKEIAQS--PKLENI 898 + + N + G+GH A + + ++ E GLS++ + + + E I Sbjct: 682 SQSRARXENRLRGSGHGIAAARXDAXLNIAGWXSEQXGGLSYLEFLHTLEKKVDEDWEGI 741 Query: 899 LQDIQSIGAHVLRKDSMRCALNMSAQ----SNAPERLESFLQSIPGDFTSQPGQTVHSFN 954 ++ I +L ++ C +N +A +N + + FL +P + G V Sbjct: 742 SSSLEEIRRSLLARNG--CIVNXTADGKSLTNVEKSVAKFLDLLP---ENPSGGLVTWDG 796 Query: 955 VSGIQKVSHVLPFPVNFTAKSLRGVPFLHKDYVALKVLSKFLTTKYLLREVREKNGAYGA 1014 ++ + V+P VN+ K+ ++ + V+SK ++ +L VR GAYG Sbjct: 797 RLPLRNEAIVIPTQVNYVGKAGNIYSTGYELDGSAYVISKHISNTWLWDRVRVSGGAYGG 856 Query: 1015 GA-VVSPSGVIQFYSYRDPYALETLATFDQSTQFLADTKLSVQDLDEAKLGVFKEVDAPI 1073 S SGV + SYRDP L+TL +D + FL + + L +A +G +VD+ Sbjct: 857 FCDFDSHSGVFSYLSYRDPNLLKTLDIYDGTGDFLRGLDVDQETLTKAIIGTIGDVDSYQ 916 Query: 1074 PPGSKGMS---KFLYGKTDEMIEQYRLSVKQVTEDDIRRVA 1111 P +KG S + L G TDE ++ R + + D + A Sbjct: 917 LPDAKGYSSLLRHLLGVTDEERQRKREEILTTSLKDFKDFA 957

PyMOL of 2fge

>pdb|3S5H|A Chain A, Crystal Structures Of Falcilysin, A M16 Metalloprotease From The Malaria Parasite Plasmodium Falciparum Length = 1193

Back alignment and structure

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		1147
2fge_A		995	Atprep2;, zinc metalloprotease (insulinase family)	0.0
3s5m_A		1193	Falcilysin; M16 metalloprotease, peptidase, hydrol	0.0
3ami_A		445	Zinc peptidase; alpha/beta, zinc binding, hydrolas	9e-25
3ami_A		445	Zinc peptidase; alpha/beta, zinc binding, hydrolas	8e-06
1q2l_A		939	Protease III; hydrolase; 2.20A {Escherichia coli s	6e-23
3cww_A		990	Insulysin, insulin-degrading enzyme, insulinase; A	7e-23
3go9_A		492	Insulinase family protease; IDP00573, structural g	1e-20
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-15
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-11
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-11
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-08
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-08
3eoq_A		406	Putative zinc protease; two similar domains of bet	4e-14
3eoq_A		406	Putative zinc protease; two similar domains of bet	7e-07
3hdi_A		421	Processing protease; CAGE structure, M16B peptidas	2e-13
3hdi_A		421	Processing protease; CAGE structure, M16B peptidas	1e-06
3gwb_A		434	Peptidase M16 inactive domain family protein; pept	3e-12
3gwb_A		434	Peptidase M16 inactive domain family protein; pept	3e-10
3amj_B		424	Zinc peptidase inactive subunit; alpha/beta, zinc	1e-11
3amj_B		424	Zinc peptidase inactive subunit; alpha/beta, zinc	1e-09
3d3y_A		425	Uncharacterized protein; APC29635, conserved prote	2e-11
3d3y_A		425	Uncharacterized protein; APC29635, conserved prote	6e-06
1pp9_A		446	Ubiquinol-cytochrome C reductase complex core Pro	4e-11
1pp9_A		446	Ubiquinol-cytochrome C reductase complex core Pro	6e-04
3ih6_A		197	Putative zinc protease; bordetella pertussis toham	1e-10
3ih6_A		197	Putative zinc protease; bordetella pertussis toham	2e-09
3cx5_A		431	Cytochrome B-C1 complex subunit 1, mitochondrial;	2e-10
3cx5_A		431	Cytochrome B-C1 complex subunit 1, mitochondrial;	2e-04
1hr6_B		443	Beta-MPP, mitochondrial processing peptidase beta	9e-10
1pp9_B		439	Ubiquinol-cytochrome C reductase complex core Pro	1e-09
1hr6_A		475	Alpha-MPP, mitochondrial processing peptidase alph	2e-09
3cx5_B		352	Cytochrome B-C1 complex subunit 2, mitochondrial;	1e-06

>2fge_A Atprep2;, zinc metalloprotease (insulinase family); peptidasome, protease-peptide complex, hydrolase, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 Length = 995	Back alignment and structure

 Score =  686 bits (1770), Expect = 0.0
 Identities = 279/1014 (27%), Positives = 457/1014 (45%), Gaps = 69/1014 (6%)

Query: 141  FEEGAEVEGFLVKNVTPIPEFQMTAIKLQHVKTLAEYFHLSRDDSNNVFAVAFRTPPPDS 200
             ++ AE  GF   +   I E +  AI  +H KT  E   +S +D N VF V FRTPP DS
Sbjct: 13   GQDEAEKLGFEKVSEEFISECKSKAILFKHKKTGCEVMSVSNEDENKVFGVVFRTPPKDS 72

Query: 201  TGITHILEHLSLCGSVKYPCRDPFMKMLTRSMATFMNAMTGPDYTFYPFSSQNHCDYFNL 260
            TGI HIL+H  LCGS KYP ++PF+++L  S+ TF+NA T PD T YP +S N  D++NL
Sbjct: 73   TGIPHILQHSVLCGSRKYPVKEPFVELLKGSLHTFLNAFTYPDRTCYPVASTNTKDFYNL 132

Query: 261  MSIYLDAVFNPQL--KQLDFMQEGWRLEHEDIKDQNSPIIFKGVVFNEMKGAFSDNSYIF 318
            + +YLDAVF P+       F QEGW  E  D    +  I +KGVVFNEMKG +S    I 
Sbjct: 133  VDVYLDAVFFPKCVDDAHTFQQEGWHYELNDP---SEDISYKGVVFNEMKGVYSQPDNIL 189

Query: 319  GEALMNNILPTYCYKHVSGGDPIKILNLKYENLVNYHKKHYHPTNSKFFSYGNFNLEDHL 378
            G      + P   Y   SGGDP  I NL +E    +H+++YHP+N++ + YG+ +    L
Sbjct: 190  GRIAQQALSPENTYGVDSGGDPKDIPNLTFEEFKEFHRQYYHPSNARIWFYGDDDPVHRL 249

Query: 379  SFINTNYLSKINPYQHHRSSTAVLPEPAWDKPRQLHIHGRHDPLA-SENQSHIAIAYKCA 437
              ++  YL          +S+ +  +  + +P +L            + +  + + +  +
Sbjct: 250  RVLS-EYLDMF-EASPSPNSSKIKFQKLFSEPVRLVEKYPAGRDGDLKKKHMLCVNWLLS 307

Query: 438  -VMDNFKDVFVLNILGDLLLKGPNAPFYKNLVESGLGLSFSPVTGYEASIHDTLFTVGLQ 496
                + +    L  L  L+L  P +P  K L+ESGLG +    +G    +    F     
Sbjct: 308  EKPLDLQTQLALGFLDHLMLGTPASPLRKILLESGLGEALVS-SGLSDELLQPQFG---- 362

Query: 497  GVDSNKFDEIIGAVNKTIDEVIAEGFDKERVAIGLQGVDSNKFDEIKGAVNKTIDEVIAE 556
                                            IGL+GV      +++  +  T+ ++  E
Sbjct: 363  --------------------------------IGLKGVSEENVQKVEELIMDTLKKLAEE 390

Query: 557  GFDKERVASVLHSLELSLKHQSSN---FGLNLLFWLVPFMNHDCDVIHLLHINDRLNWFK 613
            GFD + V + ++++E SL+  ++     GL+L+   +    +D D    L   + L   K
Sbjct: 391  GFDNDAVEASMNTIEFSLRENNTGSFPRGLSLMLQSISKWIYDMDPFEPLKYTEPLKALK 450

Query: 614  KHIQE--NPTYLQEKVDEYLRNNPHKLIITMSPEKTFDEKLDKVEKDILKDRISQMNDQD 671
              I E  +       +++ + NN H++ I M P+     + +  EK+IL+   + M ++D
Sbjct: 451  TRIAEEGSKAVFSPLIEKLILNNSHRVTIEMQPDPEKATQEEVEEKNILEKVKAAMTEED 510

Query: 672  LNKVYVNGTELRKEQEKEQN---IDVLPTLKISDVDDHVERVVTTDKHILQVPIQLSTQP 728
            L ++     EL+ +QE       +  +P+L + D+      V T    I  V +      
Sbjct: 511  LAELARATEELKLKQETPDPPEALRCVPSLNLGDIPKEPTYVPTEVGDINGVKVLRHDLF 570

Query: 729  TNGVTYFRSVVDTSKLSPELKPLVPLFNYVINQMRTKNYDFREMDQLIHMSTGGISFNSH 788
            TN + Y   V D   L  EL PLVPLF   + +M TK+  F +++QLI   TGGIS    
Sbjct: 571  TNDIIYTEVVFDIGSLKHELLPLVPLFCQSLLEMGTKDLTFVQLNQLIGRKTGGISV-YP 629

Query: 789  LGESCSTPNGFEEAILVSSHCLEHNNDKMFDVLSELFNNVQLTDLNRFTTLVNTLSSELI 848
            L  S    +     I+V    +    D +F++++ L   VQ TD  RF   V+   + + 
Sbjct: 630  LTSSVRGKDEPCSKIIVRGKSMAGRADDLFNLMNCLLQEVQFTDQQRFKQFVSQSRARME 689

Query: 849  NGISGNGHRYAMSIASSLVDPVSEQKEIYSGLSFVSKIKEIAQSPK--LENILQDIQSIG 906
            N + G+GH  A +   ++++      E   GLS++  +  + +      E I   ++ I 
Sbjct: 690  NRLRGSGHGIAAARMDAMLNIAGWMSEQMGGLSYLEFLHTLEKKVDEDWEGISSSLEEIR 749

Query: 907  AHVLRKDSMRCALNMSAQS--NAPERLESFLQSIPGDFTSQPGQTVHSFNVSGIQKVSHV 964
              +L ++     +    +S  N  + +  FL  +     +  G  V       ++  + V
Sbjct: 750  RSLLARNGCIVNMTADGKSLTNVEKSVAKFLDLL---PENPSGGLVTWDGRLPLRNEAIV 806

Query: 965  LPFPVNFTAKSLRGVPFLHKDYVALKVLSKFLTTKYLLREVREKNGAYGAGAVVSP-SGV 1023
            +P  VN+  K+       ++   +  V+SK ++  +L   VR   GAYG        SGV
Sbjct: 807  IPTQVNYVGKAGNIYSTGYELDGSAYVISKHISNTWLWDRVRVSGGAYGGFCDFDSHSGV 866

Query: 1024 IQFYSYRDPYALETLATFDQSTQFLADTKLSVQDLDEAKLGVFKEVDAPIPPGSKGMSKF 1083
              + SYRDP  L+TL  +D +  FL    +  + L +A +G   +VD+   P +KG S  
Sbjct: 867  FSYLSYRDPNLLKTLDIYDGTGDFLRGLDVDQETLTKAIIGTIGDVDSYQLPDAKGYSSL 926

Query: 1084 ---LYGKTDEMIEQYRLSVKQVTEDDIRRVADTYLSRDATEKLSSYVVIGPKSN 1134
               L G TDE  ++ R  +   +  D +  A               V +    +
Sbjct: 927  LRHLLGVTDEERQRKREEILTTSLKDFKDFAQAID---VVRDKGVAVAVASAED 977

PyMOL of 2fge

>3s5m_A Falcilysin; M16 metalloprotease, peptidase, hydrolase; 1.55A {Plasmodium falciparum} PDB: 3s5i_A 3s5k_A 3s5h_A Length = 1193	Back alignment and structure

>3ami_A Zinc peptidase; alpha/beta, zinc binding, hydrolase; 2.40A {Sphingomonas} PDB: 3amj_C Length = 445	Back alignment and structure

>3ami_A Zinc peptidase; alpha/beta, zinc binding, hydrolase; 2.40A {Sphingomonas} PDB: 3amj_C Length = 445	Back alignment and structure

>1q2l_A Protease III; hydrolase; 2.20A {Escherichia coli str} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 Length = 939	Back alignment and structure

>3cww_A Insulysin, insulin-degrading enzyme, insulinase; A-beta degrading enzyme, criptidase, kinins, hydrolase; 1.96A {Homo sapiens} PDB: 3ofi_A 2wc0_A 3h44_A 3n56_A 3n57_A 2wby_A 3qz2_A 3e4z_A 2wk3_A 3e4a_A* 2g47_A 2g48_A 2g49_A 2g54_A 2g56_A 2jbu_A 3e50_A 2jg4_A 3hgz_A 2yb3_A* ... Length = 990	Back alignment and structure

>3go9_A Insulinase family protease; IDP00573, structural genomics, for structural genomics of infectious diseases, csgid, HYDR; HET: MSE; 1.62A {Yersinia pestis} Length = 492	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>3eoq_A Putative zinc protease; two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)- beta structure, hydrolase; 2.29A {Thermus thermophilus} Length = 406	Back alignment and structure

>3eoq_A Putative zinc protease; two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)- beta structure, hydrolase; 2.29A {Thermus thermophilus} Length = 406	Back alignment and structure

>3hdi_A Processing protease; CAGE structure, M16B peptidase, metallopeptidase, peptidasome, protease, hydrolase; 2.70A {Bacillus halodurans c-125} Length = 421	Back alignment and structure

>3hdi_A Processing protease; CAGE structure, M16B peptidase, metallopeptidase, peptidasome, protease, hydrolase; 2.70A {Bacillus halodurans c-125} Length = 421	Back alignment and structure

>3gwb_A Peptidase M16 inactive domain family protein; peptidase M16 family, PFL_5859, structural genomics, PSI-2, structure initiative; 1.90A {Pseudomonas fluorescens} Length = 434	Back alignment and structure

>3gwb_A Peptidase M16 inactive domain family protein; peptidase M16 family, PFL_5859, structural genomics, PSI-2, structure initiative; 1.90A {Pseudomonas fluorescens} Length = 434	Back alignment and structure

>3amj_B Zinc peptidase inactive subunit; alpha/beta, zinc binding, hydrolase; 3.00A {Sphingomonas} Length = 424	Back alignment and structure

>3amj_B Zinc peptidase inactive subunit; alpha/beta, zinc binding, hydrolase; 3.00A {Sphingomonas} Length = 424	Back alignment and structure

>3d3y_A Uncharacterized protein; APC29635, conserved protein, enterococcus faecalis V583, STR genomics, PSI-2, protein structure initiative; 1.95A {Enterococcus faecalis} Length = 425	Back alignment and structure

>3d3y_A Uncharacterized protein; APC29635, conserved protein, enterococcus faecalis V583, STR genomics, PSI-2, protein structure initiative; 1.95A {Enterococcus faecalis} Length = 425	Back alignment and structure

>1pp9_A Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_A* 1be3_A* 1l0n_A* 1ntk_A* 1ntm_A* 1ntz_A* 1nu1_A* 1l0l_A* 1ppj_A* 1sqq_A* 1sqv_A* 1sqx_A* 2a06_A* 2fyu_A* 2ybb_A* 1sqb_A* 1sqp_A* 1qcr_A* 1bcc_A* 2bcc_A* ... Length = 446

Back alignment and structure

>3ih6_A Putative zinc protease; bordetella pertussis tohama I, struc genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 2.15A {Bordetella pertussis} PDB: 3ivl_A Length = 197	Back alignment and structure

>3ih6_A Putative zinc protease; bordetella pertussis tohama I, struc genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 2.15A {Bordetella pertussis} PDB: 3ivl_A Length = 197	Back alignment and structure

>3cx5_A Cytochrome B-C1 complex subunit 1, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1p84_A* 2ibz_A* 1kb9_A* 3cxh_A* 1ezv_A* 1kyo_A* Length = 431	Back alignment and structure

>3cx5_A Cytochrome B-C1 complex subunit 1, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1p84_A* 2ibz_A* 1kb9_A* 3cxh_A* 1ezv_A* 1kyo_A* Length = 431	Back alignment and structure

>1hr6_B Beta-MPP, mitochondrial processing peptidase beta subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_B 1hr8_B* 1hr9_B* Length = 443	Back alignment and structure

>1pp9_B Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_B* 1be3_B* 1l0n_B* 1ntk_B* 1ntm_B* 1ntz_B* 1nu1_B* 1l0l_B* 1ppj_B* 1sqq_B* 1sqv_B* 1sqx_B* 2a06_B* 2fyu_B* 2ybb_B* 1sqb_B* 1sqp_B* 1qcr_B* 2bcc_B* 3bcc_B* ... Length = 439

Back alignment and structure

>1hr6_A Alpha-MPP, mitochondrial processing peptidase alpha subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_A 1hr8_A* 1hr9_A* Length = 475	Back alignment and structure

>3cx5_B Cytochrome B-C1 complex subunit 2, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1kb9_B* 1kyo_B* 1p84_B* 2ibz_B* 1ezv_B* 3cxh_B* Length = 352	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		1147
3s5m_A		1193	Falcilysin; M16 metalloprotease, peptidase, hydrol	100.0
2fge_A		995	Atprep2;, zinc metalloprotease (insulinase family)	100.0
3cww_A		990	Insulysin, insulin-degrading enzyme, insulinase; A	100.0
1q2l_A		939	Protease III; hydrolase; 2.20A {Escherichia coli s	100.0
3eoq_A		406	Putative zinc protease; two similar domains of bet	100.0
3ami_A		445	Zinc peptidase; alpha/beta, zinc binding, hydrolas	100.0
3hdi_A		421	Processing protease; CAGE structure, M16B peptidas	100.0
1pp9_A		446	Ubiquinol-cytochrome C reductase complex core Pro	100.0
1hr6_B		443	Beta-MPP, mitochondrial processing peptidase beta	100.0
3gwb_A		434	Peptidase M16 inactive domain family protein; pept	100.0
3amj_B		424	Zinc peptidase inactive subunit; alpha/beta, zinc	100.0
1hr6_A		475	Alpha-MPP, mitochondrial processing peptidase alph	100.0
3eoq_A		406	Putative zinc protease; two similar domains of bet	100.0
3go9_A		492	Insulinase family protease; IDP00573, structural g	100.0
3hdi_A		421	Processing protease; CAGE structure, M16B peptidas	100.0
1pp9_B		439	Ubiquinol-cytochrome C reductase complex core Pro	100.0
3cx5_A		431	Cytochrome B-C1 complex subunit 1, mitochondrial;	100.0
3ami_A		445	Zinc peptidase; alpha/beta, zinc binding, hydrolas	100.0
3gwb_A		434	Peptidase M16 inactive domain family protein; pept	100.0
1hr6_B		443	Beta-MPP, mitochondrial processing peptidase beta	100.0
3d3y_A		425	Uncharacterized protein; APC29635, conserved prote	100.0
1pp9_A		446	Ubiquinol-cytochrome C reductase complex core Pro	100.0
3amj_B		424	Zinc peptidase inactive subunit; alpha/beta, zinc	100.0
1hr6_A		475	Alpha-MPP, mitochondrial processing peptidase alph	100.0
1pp9_B		439	Ubiquinol-cytochrome C reductase complex core Pro	100.0
3d3y_A		425	Uncharacterized protein; APC29635, conserved prote	100.0
3cx5_A		431	Cytochrome B-C1 complex subunit 1, mitochondrial;	100.0
3go9_A		492	Insulinase family protease; IDP00573, structural g	100.0
1q2l_A		939	Protease III; hydrolase; 2.20A {Escherichia coli s	99.98
3cx5_B		352	Cytochrome B-C1 complex subunit 2, mitochondrial;	99.97
3cww_A		990	Insulysin, insulin-degrading enzyme, insulinase; A	99.97
3s5m_A		1193	Falcilysin; M16 metalloprotease, peptidase, hydrol	99.96
2fge_A		995	Atprep2;, zinc metalloprotease (insulinase family)	99.95
3cx5_B		352	Cytochrome B-C1 complex subunit 2, mitochondrial;	99.94
3ih6_A		197	Putative zinc protease; bordetella pertussis toham	99.76
3ih6_A		197	Putative zinc protease; bordetella pertussis toham	99.72

>3s5m_A Falcilysin; M16 metalloprotease, peptidase, hydrolase; 1.55A {Plasmodium falciparum} PDB: 3s5i_A 3s5k_A 3s5h_A	Back alignment and structure

Probab=100.00  E-value=1.7e-113  Score=1094.54  Aligned_cols=948  Identities=24%  Similarity=0.364  Sum_probs=822.7

Q ss_pred             cCccccCeEeeeeeeccccceeeeEEEEecccceEEEeecCCCC---ceEEEEecCCCCCCCCchHHHHHHHhcCCCCCC
Q psy14715        143 EGAEVEGFLVKNVTPIPEFQMTAIKLQHVKTLAEYFHLSRDDSN---NVFAVAFRTPPPDSTGITHILEHLSLCGSVKYP  219 (1147)
Q Consensus       143 ~~~~~~~f~v~~~~~~~~~~~~~~~~~~l~NG~~v~~~~~~~~~---~~~~~G~~~e~~~~~G~ah~leh~~~~Gs~~~~  219 (1147)
                      .|...+||++++...+|+++++.+++.|++||++|+++++++++   .+|.+|++++|.+..|+|||+|||+||||++||
T Consensus        64 ~~~~~~~f~~~~~~~~p~~~~~~~~~~~l~nGl~vl~i~~~~~~~~~~~f~vg~~tep~~~~GvAH~lEHmlf~GS~k~p  143 (1193)
T 3s5m_A           64 KSPKHNSYDIIEKRYNEEFKMTYTVYQHKKAKTQVISLGTNDPLDVEQAFAFYVKTLTHSGKGIPHILEHSVLSGSKNYN  143 (1193)
T ss_dssp             GSCCCTTEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEECCTTCCCEEEEEEEECCCSSSSCHHHHHHHHTTSCBTTBC
T ss_pred             cCCccCCeEEEEeccCCCccccceEEEECCCCCEEEEEECCCCCeEEEEEEEEECCCCCCCchHHHHHHHHHhCCCCCCC
Confidence            46678899999999999999999999999999999999999863   679999999999999999999999999999999


Q ss_pred             CCChHHHHHhhhcCCCCccccCCCcceeecccCCHHHHHHHHHHHhhhccCCCCCccc--ccccceeeeccCccCC----
Q psy14715        220 CRDPFMKMLTRSMATFMNAMTGPDYTFYPFSSQNHCDYFNLMSIYLDAVFNPQLKQLD--FMQEGWRLEHEDIKDQ----  293 (1147)
Q Consensus       220 ~~~~~~~~l~~~~g~~~na~t~~d~t~y~~~~~~~~~~~~~l~~~~d~~~~p~~~~~~--~~~e~~~~~~~~~~~~----  293 (1147)
                      .++++.++..+++|+++||+|+.|+|+|++.+.+.++++++|++++|++++|.|++++  |.+|+||++++...++    
T Consensus       144 ~~e~~~~l~~~slG~~lNA~T~~D~T~Y~~~~~~~~~l~~~L~l~~D~v~~P~l~~~~~~F~qE~~~~E~e~~~~~Er~~  223 (1193)
T 3s5m_A          144 YKNSIGLLEKGTLHTHLNAYTFNDRTVYMAGSMNNKDFFNIMGVYMDSVFQPNVLENKYIFETEGWTYEVEKLKEDEKGK  223 (1193)
T ss_dssp             CTTHHHHHHHSCCEEEEEEEECSSEEEEEEEESSHHHHHHHHHHHHHHHHSBGGGTCHHHHHHHTCEEEEEECCTTTTTC
T ss_pred             hhhHHHHHHHhccCceEEeEEcCCeEEEEEEecCHHHHHHHHHHHHHHHhCCCCccccchhhhhhhhhhhhccchhhhcc
Confidence            9998877776678889999999999999988888899999999999999999999998  9999999998753222    


Q ss_pred             -------CCCceeeeEEEecccccCCChhHHHHHHHHHhcCCCCCCCCCCCCCcccccCCChHHHHHHHhhcccCCceEE
Q psy14715        294 -------NSPIIFKGVVFNEMKGAFSDNSYIFGEALMNNILPTYCYKHVSGGDPIKILNLKYENLVNYHKKHYHPTNSKF  366 (1147)
Q Consensus       294 -------~~~~~~~~~v~~e~~~~~~~~~~~~~~~~~~~l~~~~~y~~~~~G~~~~i~~~~~~~l~~f~~~~y~p~n~~l  366 (1147)
                             .+++.+|++|++||++..++|..++.+.+.+.+||+|||+++++|++++|.++++++|++||++||+|+||+|
T Consensus       224 ~~~~~~~~~~l~~k~vV~~E~k~~~~~p~~~~~~~l~~~lf~~hpY~~~~~G~~e~I~~lt~edl~~F~~~~Y~P~Na~l  303 (1193)
T 3s5m_A          224 AEIPQMKDYKVSFNGIVYNEMKGALSSPLEDLYHEEMKYMFPDNVHSNNSGGDPKEITNLTYEEFKEFYYKNYNPKKVKV  303 (1193)
T ss_dssp             TTSCEETTEEEEEECHHHHHHHHHTTCHHHHHHHHHHHHHCTTSGGGSCTTCCHHHHTTCCHHHHHHHHHHHSCTTTCEE
T ss_pred             ccccccccchhhHHHHHHHHHHHhhCCHHHHHHHHHHHHhCCCCCCCCCCCCCHHHHhhCCHHHHHHHHHHhcCccceEE
Confidence                   4578999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEcCCCHHHHHHHHhHhhhccCCCCCCCCC-CCcCCCCCCCCCCceEEEeccCCCCCCCCcceEEEEEEccCC----CC
Q psy14715        367 FSYGNFNLEDHLSFINTNYLSKINPYQHHRS-STAVLPEPAWDKPRQLHIHGRHDPLASENQSHIAIAYKCAVM----DN  441 (1147)
Q Consensus       367 vi~Gd~~~~~~~~~i~~~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~----~~  441 (1147)
                      +++||+|++++++++++ +|+.|+.....+. .+..+..+++..|+.+.+..+..  .+..++.+.++|++|..    .+
T Consensus       304 ~v~Gdid~~~~~~~v~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~q~~l~~~~~~~~~~~~~~d  380 (1193)
T 3s5m_A          304 FFFSKNNPTELLNFVDQ-YLGQLDYSKYRDDAVESVEYQTYKKGPFYIKKKYGDH--SEEKENLVSVAWLLNPKVDKTNN  380 (1193)
T ss_dssp             EEEESSCTHHHHHHHHH-HHTTCCGGGCCCCCCCCCCCCBCCCCCEEEEEEEECC--CSSCCEEEEEEEESSCBCC----
T ss_pred             EEEecCCHHHHHHHHHH-HhccCCCCCCCcccccccCCCCCCCCCeEEEEecCCC--CCccccEEEEEEEecCccccccc
Confidence            99999999999999997 9999986542111 01123345566676666543321  23678999999999853    22


Q ss_pred             -----------------------------HHHHHHHHHHHHHhcCCCChHhhHHHHhcCCCCCccccccccCCCcceEEE
Q psy14715        442 -----------------------------FKDVFVLNILGDLLLKGPNAPFYKNLVESGLGLSFSPVTGYEASIHDTLFT  492 (1147)
Q Consensus       442 -----------------------------~~~~~~l~vl~~iL~~~~~s~L~~~lre~~~~~~~s~~~~~~~~~~~~~~~  492 (1147)
                                                   .++.+++.+|+.+|+||.+|||+++||++|++.+++ .+++......+.|.
T Consensus       381 ~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~d~~al~vL~~iLggg~sSrL~~~L~e~gLa~~v~-~~~~~~~~~~~~f~  459 (1193)
T 3s5m_A          381 HNNNHSNNQSSENNGYSNGSHSSDLSLENPTDYFVLLIINNLLIHTPESVLYKALTDCGLGNNVI-DRGLNDSLVQYIFS  459 (1193)
T ss_dssp             ------------------CCCCSTTCCCSHHHHHHHHHHHHHHHSSTTSHHHHHHHHHCSCSEEE-EEEEECSSSSCEEE
T ss_pred             ccccccccccccccccccccccccccccCccHHHHHHHHHHHHCCCCCCHHHHHHHhcCCeeeec-ccccccccCCcEEE
Confidence                                         478999999999999999999999999988875543 25677777778999


Q ss_pred             EEEeCCCCCc--------H-HHHHhhhcccchhhhhhccchhhhhhcccCCCCcchHHHHHHHHHHHHHHHHcCCCHHHH
Q psy14715        493 VGLQGVDSNK--------F-DEIIGAVNKTIDEVIAEGFDKERVAIGLQGVDSNKFDEIKGAVNKTIDEVIAEGFDKERV  563 (1147)
Q Consensus       493 i~~~~~~~~~--------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l~~~g~~~~el  563 (1147)
                      ++++++++++        . +++++                                    .|.++|++++++||+++|+
T Consensus       460 i~~~g~~~~~~~~~~~~~~~~~~~~------------------------------------~I~~~L~~l~~~gi~~~el  503 (1193)
T 3s5m_A          460 IGLKGIKRNNEKIKNFDKVHYEVED------------------------------------VIMNALKKVVKEGFNKSAV  503 (1193)
T ss_dssp             EEEEEECTTCTTCSCGGGHHHHHHH------------------------------------HHHHHHHHHHHHCCCHHHH
T ss_pred             EEEecCChhhccccchhhHHHHHHH------------------------------------HHHHHHHHHHHcCCCHHHH
Confidence            9988887754        4 57777                                    9999999999999999999


Q ss_pred             HHHHHHHHhhhhcc--cCCchHHHHHHhhhhhccCCChhHhhhHHHHHHHHHHHhhcCccHHHHHHHHHhccCCCeEEEE
Q psy14715        564 ASVLHSLELSLKHQ--SSNFGLNLLFWLVPFMNHDCDVIHLLHINDRLNWFKKHIQENPTYLQEKVDEYLRNNPHKLIIT  641 (1147)
Q Consensus       564 ~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~l~~~~~~~~~~  641 (1147)
                      ++++++++.++++.  ....|+.++..++..|++++||...+.+.+.++++++.+..++.++++++++||.+|+|+++++
T Consensus       504 e~a~~~le~~~re~~~~~~~gl~~~~~~~~~w~~~~dp~~~l~~~~~l~~l~~~~~~~~~~~~~li~~yll~n~~~~~~~  583 (1193)
T 3s5m_A          504 EASINNIEFILKEANLKTSKSIDFVFEMTSKLNYNRDPLLIFEFEKYLNIVKNKIKNEPMYLEKFVEKHFINNAHRSVIL  583 (1193)
T ss_dssp             HHHHHHHHHHHHHHTTSTTHHHHHHHHHHHHHHTTCCTTTTTSHHHHHHHHHHHHHHSTTHHHHHHHHHTTTCCCEEEEE
T ss_pred             HHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhccCCceEEEE
Confidence            99999999999875  3467778888889999999999999999999999998765457899999999998788999999


Q ss_pred             EecCcChHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhc---cccCCCCCCCcCCCCCCCcccccccee----
Q psy14715        642 MSPEKTFDEKLDKVEKDILKDRISQMNDQDLNKVYVNGTELRKEQE---KEQNIDVLPTLKISDVDDHVERVVTTD----  714 (1147)
Q Consensus       642 ~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~lp~l~~~di~~~~~~~~~~~----  714 (1147)
                      +.|++.+.++.+++++++|++++++||+++++++++++.+++++|.   .++++++||.++++|||.+++.+|...    
T Consensus       584 ~~P~~~~~~~~~~~e~~~L~~~~~~ls~~~~~~i~~~~~~L~~~q~~~~~~e~l~~lP~l~~~Di~~~~~~~~~~~~~~~  663 (1193)
T 3s5m_A          584 LEGDENYAQEQENLEKQELKKRIENFNEQEKEQVIKNFEELSKYKNAEESPEHLNKFPIISISDLNKKTLEVPVNVYFTN  663 (1193)
T ss_dssp             EEEESSHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHTTSCCCCGGGSCSSCCCCCCEEEEEC
T ss_pred             EEcCCCHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHhCCCChhhHHhCCcCcHHHcCCCcccCcccccccc
Confidence            9999999999999999999999999999999999999999988877   456688999999999998777666552    


Q ss_pred             ----------------------------------------------------------eeecCccEEEEecCCCCeEEEE
Q psy14715        715 ----------------------------------------------------------KHILQVPIQLSTQPTNGVTYFR  736 (1147)
Q Consensus       715 ----------------------------------------------------------~~~NG~~v~~~~~~~~~~v~~~  736 (1147)
                                                                                ...||++|++++.++++++|++
T Consensus       664 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~TNGIvY~~  743 (1193)
T 3s5m_A          664 INENNNIMETYNKLKTNEHMLKDNMDVFLKKYVLKNDKHNTNNNNNNNNNMDYSFTETKYEGNVPILVYEMPTTGIVYLQ  743 (1193)
T ss_dssp             TTTCSCHHHHHHHHHTCHHHHHHHHHHHHHHHTTC---------------------CCTTTTCEEEEEEECCCTTEEEEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccCCeEEEEEECCCCCeEEEE
Confidence                                                                      0127999999999999999999


Q ss_pred             EEEeCCCCCCCccccchhHHHHHhhcCCCCCCHHHHHHHHHhhccceEEEeeeccCCCC-----CCcceeEEEEEEEecc
Q psy14715        737 SVVDTSKLSPELKPLVPLFNYVINQMRTKNYDFREMDQLIHMSTGGISFNSHLGESCST-----PNGFEEAILVSSHCLE  811 (1147)
Q Consensus       737 l~~~~g~~~~~~~~~~~l~~~ll~~~Gt~~~s~~el~~~ie~~g~~l~~~~~~~~~~~~-----~~~~~~~~~i~~~~l~  811 (1147)
                      ++|+.|.+++++.++++||+.+|...||+++++.|+.+.++.++||+++++++.++.++     .+...+++.++++|+.
T Consensus       744 l~fdl~~l~~e~l~yl~Lf~~~L~~lGT~~~sy~el~~~i~~~tGGis~s~~~~~~~~~~~~~~~~~~~~~~~vs~kaL~  823 (1193)
T 3s5m_A          744 FVFSLDHLTVDELAYLNLFKTLILENKTNKRSSEDFVILREKNIGSMSANVALYSKDDHLNVTDKYNAQALFNLEMHVLS  823 (1193)
T ss_dssp             EEEECTTCCHHHHTTHHHHHHHTTTCCBSSSCHHHHHHHHHHHCSEEEEEEEEECCCBTTBCCCTTCCEEEEEEEEEEEG
T ss_pred             EEEECCCCCHHHHhhHHHHHHHHHhCCCCCCCHHHHHHHHHHhCCceEEEeeeecccccccccccccccceEEEEEEEhh
Confidence            99999999988899999999999989999999999999999999999999986543321     1223788999999999


Q ss_pred             ccHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHHHhhcccCcCcHHHHHHHHhccCCchhhhhhHhcchhHHHHHHHHhc
Q psy14715        812 HNNDKMFDVLSELFNNVQLTDLNRFTTLVNTLSSELINGISGNGHRYAMSIASSLVDPVSEQKEIYSGLSFVSKIKEIAQ  891 (1147)
Q Consensus       812 ~~l~~~l~ll~~~l~~p~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~~~~l~~l~~  891 (1147)
                      ++++++++|+.+++++|.|++.+++++++.+.++++.+.+.++||.+|+.++.+.+++.+++.+.++|++++.+|+++.+
T Consensus       824 ~n~~~~~~Ll~eiL~~~~F~d~eRlk~ll~~~ks~le~~i~~sGH~~A~~ra~s~~s~~~~~~e~~~Gl~~~~fl~~l~~  903 (1193)
T 3s5m_A          824 HKCNDALNIALEAVKESDFSNKKKVIDILKRKINGMKTTFSEKGYAILMKYVKAHLNSKHYAHNIIYGYENYLKLQEQLE  903 (1193)
T ss_dssp             GGHHHHHHHHHHHHHSBCTTCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTTTTCHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred             hcHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHhcCcchhhhhhhCChHHHHHHHHHHH
Confidence            99999999999999999998788999999999999999999999999999999999999999999999999999998643


Q ss_pred             C--CChHHHHHHHHHHHHHhcCCCCcEEEEEeCCC--CChHHHHHHHhhcCCC----CCC----------CC-CCCcc--
Q psy14715        892 S--PKLENILQDIQSIGAHVLRKDSMRCALNMSAQ--SNAPERLESFLQSIPG----DFT----------SQ-PGQTV--  950 (1147)
Q Consensus       892 ~--~~~~~~~~dl~~~~~~~~~~~n~~l~v~Gd~~--~~~~~~v~~~~~~l~~----~~~----------~~-~~~~~--  950 (1147)
                      .  .+++.+.++|+++++++|+++|+.+.++|+.+  +++.+.++++++.|+.    ...          .. .....  
T Consensus       904 ~~e~~~~~l~~~L~~i~~~if~~~nl~vsvtg~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  983 (1193)
T 3s5m_A          904 LAENDFKTLENILVRIRNKIFNKKNLMVSVTSDYGALKHLFVNSNESLKNLVSYFEENDKYINDMQNKVNDPTVMGWNEE  983 (1193)
T ss_dssp             HHHHCHHHHHHHHHHHHHHHSCSTTEEEEEEECGGGTHHHHTTTHHHHHHHHHHHHHGGGGSCCCCSSSCCCCCCCHHHH
T ss_pred             hhHhhHHHHHHHHHHHHHHHcCCCCeEEEEEeChhhHHHHHHHHHHHHHhhhhccccccccccccccccccccccccccc
Confidence            2  24778899999999999999999999999986  6666666666665531    000          00 00000  


Q ss_pred             ----cccccCccceeEEEecccccEEEEEecCCCCCCCchhHHHHHHHhhcCccchhhHhccCCccccccccCCCceEEE
Q psy14715        951 ----HSFNVSGIQKVSHVLPFPVNFTAKSLRGVPFLHKDYVALKVLSKFLTTKYLLREVREKNGAYGAGAVVSPSGVIQF 1026 (1147)
Q Consensus       951 ----~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~d~~al~vl~~iLg~srL~~~lRek~gaY~v~~~~~~~g~~~~ 1026 (1147)
                          ..+......+..+..|.+++|++++++....+++|++++.|++.|||+++||++||||+||||++|++...|.|.|
T Consensus       984 ~~~~~~~~~~~~~~e~~~~p~~v~yv~~~~~~~~~~~~d~~al~Vl~~iLg~~~L~~eIREkgGAYg~~s~~~~~G~f~~ 1063 (1193)
T 3s5m_A          984 IKSKKLFDEEKVKKEFFVLPTFVNSVSMSGILFKPGEYLDPSFTVIVAALKNSYLWDTVRGLNGAYGVFADIEYDGSVVF 1063 (1193)
T ss_dssp             HHHTTCCCTTCCEEEEEECCCSSBEEEEEEECSCTTCBCCTHHHHHHHHHHHTHHHHHHTTTTCCSEEEEEECTTSEEEE
T ss_pred             cccccccccccccceeEecCCcceEEEEEecCCCCCCCchHHHHHHHHHHCccHHHHHHHhcCCeeEEEEeccCCCcEEE
Confidence                0111111156778889999999999999999999999999999999999999999999999999999877899999


Q ss_pred             EEeeCCCHHHHHHHHHHHHHHHHc--CCCCHHHHHHHHHHhhhhccCCCC---hhhHHHHHHHcCCCHHHHHHHHHHHhc
Q psy14715       1027 YSYRDPYALETLATFDQSTQFLAD--TKLSVQDLDEAKLGVFKEVDAPIP---PGSKGMSKFLYGKTDEMIEQYRLSVKQ 1101 (1147)
Q Consensus      1027 ~~~~~~~~~~~~~~~~~~l~~l~~--~~ite~el~~aK~~l~~~l~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~i~~ 1101 (1147)
                      ++|++|+..++++++.++++++.+  .++|++||++||.+++++++++.+   .+..++..+++|++.++++++++.|.+
T Consensus      1064 ~syrdp~~~~tl~~~~~~~~~l~~~~~~~teeEL~~ak~~~~~~~d~p~~p~~~a~~~~~~~~~Gl~~d~~~~~~~~I~a 1143 (1193)
T 3s5m_A         1064 LSARDPNLEKTLATFRESAKGLRKMADTMTENDLLRYIINTIGTIDKPRRGIELSKLSFLRLISNESEQDRVEFRKRIMN 1143 (1193)
T ss_dssp             EEESBSCSHHHHHHHHTHHHHHHHHHHHCCHHHHHHHHHHHHHHHSCCCCTHHHHHHHHHHHHTTCCHHHHHHHHHHHHT
T ss_pred             EEEeCCCHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHcCcCHHHHHHHHHHHHc
Confidence            999999999999999999999987  589999999999999999998888   555667788999999999999999999


Q ss_pred             CCHHHHHHHHHHhhcc---ccccCCCeEEEEcCCCC
Q psy14715       1102 VTEDDIRRVADTYLSR---DATEKLSSYVVIGPKSN 1134 (1147)
Q Consensus      1102 vT~edi~~~a~k~l~~---~~~~~~~~~~vvG~~~~ 1134 (1147)
                      ||++||+++|++|+.+   ++.    .++|||++.+
T Consensus      1144 VT~edv~~vA~~~~~~l~~~~~----~~vvvG~~~~ 1175 (1193)
T 3s5m_A         1144 TKKEDFYKFADLLESKVNEFEK----NIVIITTKEK 1175 (1193)
T ss_dssp             CCHHHHHHHHHHHHHTHHHHTT----EEEEEECHHH
T ss_pred             CCHHHHHHHHHHHhhhhcccCc----eEEEEcCHHH
Confidence            9999999999999987   345    7999999764

PyMOL of 3s5m

>2fge_A Atprep2;, zinc metalloprotease (insulinase family); peptidasome, protease-peptide complex, hydrolase, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1	Back alignment and structure

>3cww_A Insulysin, insulin-degrading enzyme, insulinase; A-beta degrading enzyme, criptidase, kinins, hydrolase; 1.96A {Homo sapiens} PDB: 3ofi_A 2wc0_A 3h44_A 3n56_A 3n57_A 2wby_A 3qz2_A 3e4z_A 2wk3_A 3e4a_A* 2g47_A 2g48_A 2g49_A 2g54_A 2g56_A 2jbu_A 3e50_A 2jg4_A 3hgz_A 2yb3_A* ...	Back alignment and structure

>1q2l_A Protease III; hydrolase; 2.20A {Escherichia coli str} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1	Back alignment and structure

>3eoq_A Putative zinc protease; two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)- beta structure, hydrolase; 2.29A {Thermus thermophilus}	Back alignment and structure

>3ami_A Zinc peptidase; alpha/beta, zinc binding, hydrolase; 2.40A {Sphingomonas} PDB: 3amj_C	Back alignment and structure

>3hdi_A Processing protease; CAGE structure, M16B peptidase, metallopeptidase, peptidasome, protease, hydrolase; 2.70A {Bacillus halodurans c-125}	Back alignment and structure

Back alignment and structure

>1hr6_B Beta-MPP, mitochondrial processing peptidase beta subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_B 1hr8_B* 1hr9_B*	Back alignment and structure

>3gwb_A Peptidase M16 inactive domain family protein; peptidase M16 family, PFL_5859, structural genomics, PSI-2, structure initiative; 1.90A {Pseudomonas fluorescens}	Back alignment and structure

>3amj_B Zinc peptidase inactive subunit; alpha/beta, zinc binding, hydrolase; 3.00A {Sphingomonas}	Back alignment and structure

>1hr6_A Alpha-MPP, mitochondrial processing peptidase alpha subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_A 1hr8_A* 1hr9_A*	Back alignment and structure

>3eoq_A Putative zinc protease; two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)- beta structure, hydrolase; 2.29A {Thermus thermophilus}	Back alignment and structure

>3go9_A Insulinase family protease; IDP00573, structural genomics, for structural genomics of infectious diseases, csgid, HYDR; HET: MSE; 1.62A {Yersinia pestis}	Back alignment and structure

>3hdi_A Processing protease; CAGE structure, M16B peptidase, metallopeptidase, peptidasome, protease, hydrolase; 2.70A {Bacillus halodurans c-125}	Back alignment and structure

Back alignment and structure

>3cx5_A Cytochrome B-C1 complex subunit 1, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1p84_A* 2ibz_A* 1kb9_A* 3cxh_A* 1ezv_A* 1kyo_A*	Back alignment and structure

>3ami_A Zinc peptidase; alpha/beta, zinc binding, hydrolase; 2.40A {Sphingomonas} PDB: 3amj_C	Back alignment and structure

>3gwb_A Peptidase M16 inactive domain family protein; peptidase M16 family, PFL_5859, structural genomics, PSI-2, structure initiative; 1.90A {Pseudomonas fluorescens}	Back alignment and structure

>1hr6_B Beta-MPP, mitochondrial processing peptidase beta subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_B 1hr8_B* 1hr9_B*	Back alignment and structure

>3d3y_A Uncharacterized protein; APC29635, conserved protein, enterococcus faecalis V583, STR genomics, PSI-2, protein structure initiative; 1.95A {Enterococcus faecalis}	Back alignment and structure

Back alignment and structure

>3amj_B Zinc peptidase inactive subunit; alpha/beta, zinc binding, hydrolase; 3.00A {Sphingomonas}	Back alignment and structure

>1hr6_A Alpha-MPP, mitochondrial processing peptidase alpha subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_A 1hr8_A* 1hr9_A*	Back alignment and structure

Back alignment and structure

>3d3y_A Uncharacterized protein; APC29635, conserved protein, enterococcus faecalis V583, STR genomics, PSI-2, protein structure initiative; 1.95A {Enterococcus faecalis}	Back alignment and structure

>3cx5_A Cytochrome B-C1 complex subunit 1, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1p84_A* 2ibz_A* 1kb9_A* 3cxh_A* 1ezv_A* 1kyo_A*	Back alignment and structure

>3go9_A Insulinase family protease; IDP00573, structural genomics, for structural genomics of infectious diseases, csgid, HYDR; HET: MSE; 1.62A {Yersinia pestis}	Back alignment and structure

>1q2l_A Protease III; hydrolase; 2.20A {Escherichia coli str} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1	Back alignment and structure

>3cx5_B Cytochrome B-C1 complex subunit 2, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1kb9_B* 1kyo_B* 1p84_B* 2ibz_B* 1ezv_B* 3cxh_B*	Back alignment and structure

>3cww_A Insulysin, insulin-degrading enzyme, insulinase; A-beta degrading enzyme, criptidase, kinins, hydrolase; 1.96A {Homo sapiens} PDB: 3ofi_A 2wc0_A 3h44_A 3n56_A 3n57_A 2wby_A 3qz2_A 3e4z_A 2wk3_A 3e4a_A* 2g47_A 2g48_A 2g49_A 2g54_A 2g56_A 2jbu_A 3e50_A 2jg4_A 3hgz_A 2yb3_A* ...	Back alignment and structure

>3s5m_A Falcilysin; M16 metalloprotease, peptidase, hydrolase; 1.55A {Plasmodium falciparum} PDB: 3s5i_A 3s5k_A 3s5h_A	Back alignment and structure

>2fge_A Atprep2;, zinc metalloprotease (insulinase family); peptidasome, protease-peptide complex, hydrolase, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1	Back alignment and structure

>3cx5_B Cytochrome B-C1 complex subunit 2, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1kb9_B* 1kyo_B* 1p84_B* 2ibz_B* 1ezv_B* 3cxh_B*	Back alignment and structure

>3ih6_A Putative zinc protease; bordetella pertussis tohama I, struc genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 2.15A {Bordetella pertussis} PDB: 3ivl_A	Back alignment and structure

>3ih6_A Putative zinc protease; bordetella pertussis tohama I, struc genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 2.15A {Bordetella pertussis} PDB: 3ivl_A	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		1147
d2fgea4		257	d.185.1.1 (A:15-271) Presequence protease 1, PREP1	2e-51
d2fgea1		258	d.185.1.1 (A:540-797) Presequence protease 1, PREP	9e-50
d2fgea3		268	d.185.1.1 (A:272-539) Presequence protease 1, PREP	4e-49
d2fgea2		196	d.185.1.1 (A:798-993) Presequence protease 1, PREP	8e-36
d1ppja1		232	d.185.1.1 (A:2-233) Cytochrome bc1 core subunit 1	2e-10
d3cx5a1		213	d.185.1.1 (A:27-239) Cytochrome bc1 core subunit 1	2e-09
d1hr6b1		222	d.185.1.1 (B:24-245) Mitochondrial processing pept	4e-09
d1hr6b2		217	d.185.1.1 (B:246-462) Mitochondrial processing pep	8e-08
d3cx5b1		202	d.185.1.1 (B:17-218) Cytochrome bc1 core subunit 2	2e-07
d3cx5a2		218	d.185.1.1 (A:240-457) Cytochrome bc1 core subunit	4e-07
d1q2la4		240	d.185.1.1 (A:24-263) Protease III {Escherichia col	1e-06
d1hr6a1		220	d.185.1.1 (A:14-233) Mitochondrial processing pept	1e-05
d1ppja2		209	d.185.1.1 (A:234-442) Cytochrome bc1 core subunit	1e-05
d1ppjb1		219	d.185.1.1 (B:17-235) Cytochrome bc1 core subunit 2	3e-05
d1ppjb2		204	d.185.1.1 (B:236-439) Cytochrome bc1 core subunit	3e-05
d1hr6a2		237	d.185.1.1 (A:234-470) Mitochondrial processing pep	1e-04
d1q2la1		229	d.185.1.1 (A:504-732) Protease III {Escherichia co	6e-04

>d2fgea4 d.185.1.1 (A:15-271) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 257	Back information, alignment and structure


class: Alpha and beta proteins (a+b)
fold: LuxS/MPP-like metallohydrolase
superfamily: LuxS/MPP-like metallohydrolase
family: MPP-like
domain: Presequence protease 1, PREP1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  180 bits (456), Expect = 2e-51
 Identities = 107/249 (42%), Positives = 144/249 (57%), Gaps = 6/249 (2%)

Query: 143 EGAEVEGFLVKNVTPIPEFQMTAIKLQHVKTLAEYFHLSRDDSNNVFAVAFRTPPPDSTG 202
           + AE  GF   +   I E +  AI  +H KT  E   +S +D N VF V FRTPP DSTG
Sbjct: 1   DEAEKLGFEKVSEEFISECKSKAILFKHKKTGCEVMSVSNEDENKVFGVVFRTPPKDSTG 60

Query: 203 ITHILEHLSLCGSVKYPCRDPFMKMLTRSMATFMNAMTGPDYTFYPFSSQNHCDYFNLMS 262
           I HIL+H  LCGS KYP ++PF+++L  S+ TF+NA T PD T YP +S N  D++NL+ 
Sbjct: 61  IPHILQHSVLCGSRKYPVKEPFVELLKGSLHTFLNAFTYPDRTCYPVASTNTKDFYNLVD 120

Query: 263 IYLDAVFNPQLKQ--LDFMQEGWRLEHEDIKDQNSPIIFKGVVFNEMKGAFSDNSYIFGE 320
           +YLDAVF P+       F QEGW  E     D +  I +KGVVFNEMKG +S    I G 
Sbjct: 121 VYLDAVFFPKCVDDAHTFQQEGWHYELN---DPSEDISYKGVVFNEMKGVYSQPDNILGR 177

Query: 321 ALMNNILPTYCYKHVSGGDPIKILNLKYENLVNYHKKHYHPTNSKFFSYGNFNLEDHLSF 380
                + P   Y   SGGDP  I NL +E    +H+++YHP+N++ + YG+ +    L  
Sbjct: 178 IAQQALSPENTYGVDSGGDPKDIPNLTFEEFKEFHRQYYHPSNARIWFYGDDDPVHRLRV 237

Query: 381 INTNYLSKI 389
           ++  YL   
Sbjct: 238 LS-EYLDMF 245

PyMOL of d2fgea4

>d2fgea1 d.185.1.1 (A:540-797) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 258	Back information, alignment and structure

>d2fgea3 d.185.1.1 (A:272-539) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 268	Back information, alignment and structure

>d2fgea2 d.185.1.1 (A:798-993) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 196	Back information, alignment and structure

>d1ppja1 d.185.1.1 (A:2-233) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]} Length = 232	Back information, alignment and structure

>d3cx5a1 d.185.1.1 (A:27-239) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 213	Back information, alignment and structure

>d1hr6b1 d.185.1.1 (B:24-245) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 222	Back information, alignment and structure

>d1hr6b2 d.185.1.1 (B:246-462) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 217	Back information, alignment and structure

>d3cx5b1 d.185.1.1 (B:17-218) Cytochrome bc1 core subunit 2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 202	Back information, alignment and structure

>d3cx5a2 d.185.1.1 (A:240-457) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 218	Back information, alignment and structure

>d1q2la4 d.185.1.1 (A:24-263) Protease III {Escherichia coli [TaxId: 562]} Length = 240	Back information, alignment and structure

>d1hr6a1 d.185.1.1 (A:14-233) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 220	Back information, alignment and structure

>d1ppja2 d.185.1.1 (A:234-442) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]} Length = 209	Back information, alignment and structure

>d1ppjb1 d.185.1.1 (B:17-235) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 219	Back information, alignment and structure

>d1ppjb2 d.185.1.1 (B:236-439) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 204	Back information, alignment and structure

>d1hr6a2 d.185.1.1 (A:234-470) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 237	Back information, alignment and structure

>d1q2la1 d.185.1.1 (A:504-732) Protease III {Escherichia coli [TaxId: 562]} Length = 229	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		1147
d2fgea4		257	Presequence protease 1, PREP1 {Thale cress (Arabid	100.0
d1ppja1		232	Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [T	99.97
d1hr6a1		220	Mitochondrial processing peptidase (MPP) alpha cha	99.97
d1q2la4		240	Protease III {Escherichia coli [TaxId: 562]}	99.97
d1hr6b1		222	Mitochondrial processing peptidase (MPP) beta chai	99.96
d1ppjb1		219	Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [T	99.96
d3cx5a1		213	Cytochrome bc1 core subunit 1 {Baker's yeast (Sacc	99.96
d2fgea3		268	Presequence protease 1, PREP1 {Thale cress (Arabid	99.93
d2fgea1		258	Presequence protease 1, PREP1 {Thale cress (Arabid	99.93
d3cx5b1		202	Cytochrome bc1 core subunit 2 {Baker's yeast (Sacc	99.91
d2fgea2		196	Presequence protease 1, PREP1 {Thale cress (Arabid	99.9
d1hr6b1		222	Mitochondrial processing peptidase (MPP) beta chai	99.87
d1ppja1		232	Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [T	99.86
d1q2la4		240	Protease III {Escherichia coli [TaxId: 562]}	99.85
d1hr6a1		220	Mitochondrial processing peptidase (MPP) alpha cha	99.85
d3cx5a1		213	Cytochrome bc1 core subunit 1 {Baker's yeast (Sacc	99.83
d1ppjb1		219	Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [T	99.83
d1hr6b2		217	Mitochondrial processing peptidase (MPP) beta chai	99.83
d1ppjb2		204	Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [T	99.81
d3cx5b1		202	Cytochrome bc1 core subunit 2 {Baker's yeast (Sacc	99.77
d1ppja2		209	Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [T	99.75
d1hr6a2		237	Mitochondrial processing peptidase (MPP) alpha cha	99.75
d3cx5a2		218	Cytochrome bc1 core subunit 1 {Baker's yeast (Sacc	99.68
d1hr6b2		217	Mitochondrial processing peptidase (MPP) beta chai	99.68
d1ppjb2		204	Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [T	99.67
d2fgea4		257	Presequence protease 1, PREP1 {Thale cress (Arabid	99.63
d1hr6a2		237	Mitochondrial processing peptidase (MPP) alpha cha	99.58
d1ppja2		209	Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [T	99.58
d1q2la1		229	Protease III {Escherichia coli [TaxId: 562]}	99.55
d1q2la1		229	Protease III {Escherichia coli [TaxId: 562]}	99.53
d3cx5a2		218	Cytochrome bc1 core subunit 1 {Baker's yeast (Sacc	99.51
d2fgea2		196	Presequence protease 1, PREP1 {Thale cress (Arabid	99.25
d1q2la2		228	Protease III {Escherichia coli [TaxId: 562]}	99.05
d1q2la2		228	Protease III {Escherichia coli [TaxId: 562]}	98.69
d1q2la3		240	Protease III {Escherichia coli [TaxId: 562]}	98.51
d2fgea3		268	Presequence protease 1, PREP1 {Thale cress (Arabid	97.06
d3cx5b2		150	Cytochrome bc1 core subunit 2 {Baker's yeast (Sacc	96.9
d2fgea1		258	Presequence protease 1, PREP1 {Thale cress (Arabid	96.1
d1q2la3		240	Protease III {Escherichia coli [TaxId: 562]}	94.77
d3cx5b2		150	Cytochrome bc1 core subunit 2 {Baker's yeast (Sacc	94.24

>d2fgea4 d.185.1.1 (A:15-271) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}	Back information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: LuxS/MPP-like metallohydrolase
superfamily: LuxS/MPP-like metallohydrolase
family: MPP-like
domain: Presequence protease 1, PREP1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=7.2e-43  Score=374.10  Aligned_cols=242  Identities=43%  Similarity=0.748  Sum_probs=229.1

Q ss_pred             ccCeEeeeeeeccccceeeeEEEEecccceEEEeecCCCCceEEEEecCCCCCCCCchHHHHHHHhcCCCCCCCCChHHH
Q psy14715        147 VEGFLVKNVTPIPEFQMTAIKLQHVKTLAEYFHLSRDDSNNVFAVAFRTPPPDSTGITHILEHLSLCGSVKYPCRDPFMK  226 (1147)
Q Consensus       147 ~~~f~v~~~~~~~~~~~~~~~~~~l~NG~~v~~~~~~~~~~~~~~G~~~e~~~~~G~ah~leh~~~~Gs~~~~~~~~~~~  226 (1147)
                      -.||++++.+.+|+++++.+.+.|.+||++|+++++++++.+|.+|++++|.+.+|+|||||||+|+||++||.++.|.+
T Consensus         5 ~~gf~~~~~~~i~~~~~~~~~~~h~~~G~~v~~i~~~~~~~~f~i~~~t~p~~~~G~aH~LEHm~f~GS~k~p~~~~~~~   84 (257)
T d2fgea4           5 KLGFEKVSEEFISECKSKAILFKHKKTGCEVMSVSNEDENKVFGVVFRTPPKDSTGIPHILQHSVLCGSRKYPVKEPFVE   84 (257)
T ss_dssp             HTTEEEEEEEEETTTTEEEEEEEETTTCCEEEEEECSCSSEEEEEEEECCCSSSSCHHHHHHHHTTSCBTTBCSSCHHHH
T ss_pred             ccCeEEEEEEecccccceeEEEEEcCCCCEEEEEecCCCccEEEEEeCCCCCCCcChhHHHHHHhcCCCCCCCCCcHHHH
Confidence            35999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhcCCCCccccCCCcceeecccCCHHHHHHHHHHHhhhccCCCCCcc--cccccceeeeccCccCCCCCceeeeEEE
Q psy14715        227 MLTRSMATFMNAMTGPDYTFYPFSSQNHCDYFNLMSIYLDAVFNPQLKQL--DFMQEGWRLEHEDIKDQNSPIIFKGVVF  304 (1147)
Q Consensus       227 ~l~~~~g~~~na~t~~d~t~y~~~~~~~~~~~~~l~~~~d~~~~p~~~~~--~~~~e~~~~~~~~~~~~~~~~~~~~~v~  304 (1147)
                      ++.+.+|+++||+|+.|+|+|++.+.+.+++.+++++++|.+++|.+.++  .|++|+|+.+..   +++..+.+|++|+
T Consensus        85 ~~~~~~g~~~NA~T~~d~T~Y~~~~~~~~~~~~~l~v~ld~v~~P~~~~~~~~~~~e~~~~~~~---~~~~~~~ek~vV~  161 (257)
T d2fgea4          85 LLKGSLHTFLNAFTYPDRTCYPVASTNTKDFYNLVDVYLDAVFFPKCVDDAHTFQQEGWHYELN---DPSEDISYKGVVF  161 (257)
T ss_dssp             HHHHCCEEEECCEECSSEEEEEEEESSHHHHHHHHHHHHHHHHSBGGGTSSHHHHHHTCEEECS---CTTSCCEEECHHH
T ss_pred             HHHHhcCCcccccchhhHHHHHhhhhhhhhHHHhHHHHHHHHhCcchHHHHHHHHHHHHhhhcc---chhHHHHHHHHHH
Confidence            99888888899999999999999898999999999999999999998766  477888888764   3566778899999


Q ss_pred             ecccccCCChhHHHHHHHHHhcCCCCCCCCCCCCCcccccCCChHHHHHHHhhcccCCceEEEEEcCCCHHHHHHHHhHh
Q psy14715        305 NEMKGAFSDNSYIFGEALMNNILPTYCYKHVSGGDPIKILNLKYENLVNYHKKHYHPTNSKFFSYGNFNLEDHLSFINTN  384 (1147)
Q Consensus       305 ~e~~~~~~~~~~~~~~~~~~~l~~~~~y~~~~~G~~~~i~~~~~~~l~~f~~~~y~p~n~~lvi~Gd~~~~~~~~~i~~~  384 (1147)
                      +||++..++|..++.+.+.+.+|++|||+++++|++++|.+++.++|++||++||+|+||+|+|+||+|+++++++|++ 
T Consensus       162 ~E~~~~~~~p~~~~~~~~~~~lf~~~py~~~~~G~~e~I~~it~~~l~~f~~~~Y~p~N~~l~v~G~i~~~~~~~~i~k-  240 (257)
T d2fgea4         162 NEMKGVYSQPDNILGRIAQQALSPENTYGVDSGGDPKDIPNLTFEEFKEFHRQYYHPSNARIWFYGDDDPVHRLRVLSE-  240 (257)
T ss_dssp             HHHHHHTTSHHHHHHHHHHHHHCTTSGGGSCTTCCTTTGGGCCHHHHHHHHHHHSSGGGEEEEEEESSCHHHHHHHHHH-
T ss_pred             HHHHHhcCcHHHHHHHHHhhhcccccccCCCccchhhhhhhhhHHHHHHHHHHhCCcccEEEEEEeCCCHHHHHHHHHH-
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999999997 


Q ss_pred             hhccCCCC
Q psy14715        385 YLSKINPY  392 (1147)
Q Consensus       385 ~f~~~~~~  392 (1147)
                      +|+.|++.
T Consensus       241 ~f~~~~~~  248 (257)
T d2fgea4         241 YLDMFEAS  248 (257)
T ss_dssp             HHTTCCCC
T ss_pred             HHhcCCCC
Confidence            99999875

PyMOL of d2fgea4

>d1ppja1 d.185.1.1 (A:2-233) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]}	Back information, alignment and structure

>d1hr6a1 d.185.1.1 (A:14-233) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1q2la4 d.185.1.1 (A:24-263) Protease III {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1hr6b1 d.185.1.1 (B:24-245) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1ppjb1 d.185.1.1 (B:17-235) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]}	Back information, alignment and structure

>d3cx5a1 d.185.1.1 (A:27-239) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d2fgea3 d.185.1.1 (A:272-539) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}	Back information, alignment and structure

>d2fgea1 d.185.1.1 (A:540-797) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}	Back information, alignment and structure

>d3cx5b1 d.185.1.1 (B:17-218) Cytochrome bc1 core subunit 2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d2fgea2 d.185.1.1 (A:798-993) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}	Back information, alignment and structure

>d1hr6b1 d.185.1.1 (B:24-245) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1ppja1 d.185.1.1 (A:2-233) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]}	Back information, alignment and structure

>d1q2la4 d.185.1.1 (A:24-263) Protease III {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1hr6a1 d.185.1.1 (A:14-233) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d3cx5a1 d.185.1.1 (A:27-239) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1ppjb1 d.185.1.1 (B:17-235) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]}	Back information, alignment and structure

>d1hr6b2 d.185.1.1 (B:246-462) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1ppjb2 d.185.1.1 (B:236-439) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]}	Back information, alignment and structure

>d3cx5b1 d.185.1.1 (B:17-218) Cytochrome bc1 core subunit 2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1ppja2 d.185.1.1 (A:234-442) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]}	Back information, alignment and structure

>d1hr6a2 d.185.1.1 (A:234-470) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d3cx5a2 d.185.1.1 (A:240-457) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1hr6b2 d.185.1.1 (B:246-462) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1ppjb2 d.185.1.1 (B:236-439) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]}	Back information, alignment and structure

>d2fgea4 d.185.1.1 (A:15-271) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}	Back information, alignment and structure

>d1hr6a2 d.185.1.1 (A:234-470) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1ppja2 d.185.1.1 (A:234-442) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]}	Back information, alignment and structure

>d1q2la1 d.185.1.1 (A:504-732) Protease III {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1q2la1 d.185.1.1 (A:504-732) Protease III {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d3cx5a2 d.185.1.1 (A:240-457) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d2fgea2 d.185.1.1 (A:798-993) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}	Back information, alignment and structure

>d1q2la2 d.185.1.1 (A:733-960) Protease III {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1q2la2 d.185.1.1 (A:733-960) Protease III {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1q2la3 d.185.1.1 (A:264-503) Protease III {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d2fgea3 d.185.1.1 (A:272-539) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}	Back information, alignment and structure

>d3cx5b2 d.185.1.1 (B:219-368) Cytochrome bc1 core subunit 2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d2fgea1 d.185.1.1 (A:540-797) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}	Back information, alignment and structure

>d1q2la3 d.185.1.1 (A:264-503) Protease III {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d3cx5b2 d.185.1.1 (B:219-368) Cytochrome bc1 core subunit 2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure