Psyllid ID: psy14726
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 712 | 2.2.26 [Sep-21-2011] | |||||||
| Q6JEL2 | 608 | Kelch-like protein 10 OS= | yes | N/A | 0.793 | 0.929 | 0.500 | 1e-172 | |
| Q6JEL3 | 608 | Kelch-like protein 10 OS= | yes | N/A | 0.793 | 0.929 | 0.499 | 1e-172 | |
| Q9D5V2 | 608 | Kelch-like protein 10 OS= | yes | N/A | 0.793 | 0.929 | 0.499 | 1e-172 | |
| Q53G59 | 568 | Kelch-like protein 12 OS= | no | N/A | 0.761 | 0.954 | 0.335 | 2e-98 | |
| Q8R2H4 | 568 | Kelch-like protein 12 OS= | no | N/A | 0.761 | 0.954 | 0.333 | 1e-97 | |
| Q8BZM0 | 568 | Kelch-like protein 12 OS= | no | N/A | 0.761 | 0.954 | 0.331 | 2e-97 | |
| Q5U374 | 564 | Kelch-like protein 12 OS= | no | N/A | 0.761 | 0.960 | 0.333 | 4e-97 | |
| Q5ZKD9 | 610 | Kelch-like protein 20 OS= | no | N/A | 0.810 | 0.945 | 0.331 | 1e-96 | |
| D3Z8N4 | 609 | Kelch-like protein 20 OS= | no | N/A | 0.808 | 0.945 | 0.334 | 1e-96 | |
| Q9Y2M5 | 609 | Kelch-like protein 20 OS= | no | N/A | 0.808 | 0.945 | 0.334 | 1e-96 |
| >sp|Q6JEL2|KLH10_HUMAN Kelch-like protein 10 OS=Homo sapiens GN=KLHL10 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 605 bits (1561), Expect = e-172, Method: Compositional matrix adjust.
Identities = 285/569 (50%), Positives = 389/569 (68%), Gaps = 4/569 (0%)
Query: 71 IDRAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQ 130
++R MS A + NE R + LCD ++ + F H+NILC+CS YFRALFT+ ++
Sbjct: 17 MERKMSAMACEIFNELRLEGKLCD-VVIKVNGFEFSAHKNILCSCSSYFRALFTSGWNNT 75
Query: 131 EKFSLVEIPGVDASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKR 190
EK + IPG+ +M +IEYAY R + IT DNV LL A D F + CC+F+K
Sbjct: 76 EK-KVYNIPGISPDMMKLIIEYAYTRTVPITPDNVEKLLAAADQFNIMGIVRGCCEFLKS 134
Query: 191 LTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDVARESEEIVFISEQELEEIISSDE 250
NC GI F+ ++C +L + +IL NF ++ + S E + +S EL++II DE
Sbjct: 135 ELCLDNCIGICKFTDYYYCPELRQKAYMFILHNFEEMVKVSAEFLELSVTELKDIIEKDE 194
Query: 251 LNVKSEETVWELIIRWIDYDPENRKKHIVSLMKNIRLGLLETEFFREKVKHHPYVQSTPE 310
LNVK E+ V+E I++WI +DP+NRK+HI L+ +RL L+ E+F VK + YV+ + E
Sbjct: 195 LNVKQEDAVFEAILKWISHDPQNRKQHISILLPKVRLALMHAEYFMNNVKMNDYVKDSEE 254
Query: 311 CRPIIIETFKFLYDLELIAQIDGEVPTPEIARPRVPHEILFAIGGWSGGSPTDFVETYDT 370
C+P+II K +YDL + + + P + RPR+P+ ILFAIGGWSGGSPT+ +E YD
Sbjct: 255 CKPVIINALKAMYDLNMNGPSNSDFTNP-LTRPRLPYAILFAIGGWSGGSPTNAIEAYDA 313
Query: 371 RADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPM 430
RADRWV + + PRAYHG A + +Y+IGGFD +Y+NS + F+ V K W ++APM
Sbjct: 314 RADRWVNV-TCEEESPRAYHGAAYLKGYVYIIGGFDSVDYFNSVKRFDPVKKTWHQVAPM 372
Query: 431 NFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQ 490
+ +RCYVS V + IYAMGG++G R N+ E+Y NQW+LIAPM+ +RSDASATTL
Sbjct: 373 HSRRCYVSVTVLGNFIYAMGGFDGYVRLNTAERYEPETNQWTLIAPMHEQRSDASATTLY 432
Query: 491 GKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMS 550
GK+YI GGFNG+ CL + EVY+ E NQWT+I PMR RRSG+ IAY E +Y +GGF+G +
Sbjct: 433 GKVYICGGFNGNECLFTAEVYNTESNQWTVIAPMRSRRSGIGVIAYGEHVYAVGGFDGAN 492
Query: 551 RMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTD 610
R+ + E Y+PV TW +P M+NPRSNF IEV+DD++F +GGFNG TT ++VECYDEKTD
Sbjct: 493 RLRSAEAYSPVANTWRTIPTMFNPRSNFGIEVVDDLLFVVGGFNGFTTTFNVECYDEKTD 552
Query: 611 EWYEATDMNIYRSALSACVIMGLPNVYDY 639
EWY+A DM+IYRSALS CV+ GL NV +Y
Sbjct: 553 EWYDAHDMSIYRSALSCCVVPGLANVEEY 581
|
Homo sapiens (taxid: 9606) |
| >sp|Q6JEL3|KLH10_RAT Kelch-like protein 10 OS=Rattus norvegicus GN=Klhl10 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 604 bits (1558), Expect = e-172, Method: Compositional matrix adjust.
Identities = 284/569 (49%), Positives = 388/569 (68%), Gaps = 4/569 (0%)
Query: 71 IDRAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQ 130
++R MS + NE R + LCD ++ + F H+NILC+CS YFRALFT+ ++
Sbjct: 17 MERKMSAMTCEIFNELRLEGKLCD-VVIKVNGFEFNAHKNILCSCSSYFRALFTSGWNNT 75
Query: 131 EKFSLVEIPGVDASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKR 190
EK + IPG+ +M +IEYAY R + IT DNV LL A D F + CC+F+K
Sbjct: 76 EK-KVYNIPGISPDMMKLIIEYAYTRTVPITPDNVEKLLAAADQFNIMGIVRGCCEFLKS 134
Query: 191 LTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDVARESEEIVFISEQELEEIISSDE 250
NC GI F+ ++C +L + +IL NF ++ + S E + +S EL++II DE
Sbjct: 135 ELCLDNCIGICKFTDYYYCPELRQKAYMFILHNFEEMVKVSAEFLELSVTELKDIIEKDE 194
Query: 251 LNVKSEETVWELIIRWIDYDPENRKKHIVSLMKNIRLGLLETEFFREKVKHHPYVQSTPE 310
LNVK E+ V+E I++WI +DP+NRK+HI L+ +RL L+ E+F VK + YV+ + E
Sbjct: 195 LNVKQEDAVFEAILKWISHDPQNRKQHISVLLPKVRLALMHAEYFMNNVKMNDYVKDSEE 254
Query: 311 CRPIIIETFKFLYDLELIAQIDGEVPTPEIARPRVPHEILFAIGGWSGGSPTDFVETYDT 370
C+P+II K +YDL + + + P + RPR+P+ ILFAIGGWSGGSPT+ +E YD
Sbjct: 255 CKPVIINALKAMYDLNMNGPSNSDFTNP-LTRPRLPYAILFAIGGWSGGSPTNAIEAYDA 313
Query: 371 RADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPM 430
RADRWV + + PRAYHG A + +Y+IGGFD +Y+NS + F+ V K W ++APM
Sbjct: 314 RADRWVNV-TCEEESPRAYHGAAYLKGYVYIIGGFDSVDYFNSVKRFDPVKKTWHQVAPM 372
Query: 431 NFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQ 490
+ +RCYVS V + IYAMGG++G R N+ E+Y NQW+LIAPM+ +RSDASATTL
Sbjct: 373 HSRRCYVSVTVLSNFIYAMGGFDGYVRLNTAERYEPETNQWTLIAPMHEQRSDASATTLY 432
Query: 491 GKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMS 550
GK+YI GGFNG+ CL + EVY+ E NQWT+I PMR RRSG+ IAY E +Y +GGF+G +
Sbjct: 433 GKVYICGGFNGNECLFTAEVYNTESNQWTVIAPMRSRRSGIGVIAYGEHVYAVGGFDGAN 492
Query: 551 RMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTD 610
R+ + E Y+PV TW +P M+NPRSNF IEV+DD++F +GGFNG TT ++VECYDEKTD
Sbjct: 493 RLRSAEAYSPVANTWRTIPTMFNPRSNFGIEVVDDLLFVVGGFNGFTTTFNVECYDEKTD 552
Query: 611 EWYEATDMNIYRSALSACVIMGLPNVYDY 639
EWY+A DM+IYRSALS CV+ GL NV +Y
Sbjct: 553 EWYDAHDMSIYRSALSCCVVPGLANVGEY 581
|
Rattus norvegicus (taxid: 10116) |
| >sp|Q9D5V2|KLH10_MOUSE Kelch-like protein 10 OS=Mus musculus GN=Klhl10 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 604 bits (1557), Expect = e-172, Method: Compositional matrix adjust.
Identities = 284/569 (49%), Positives = 388/569 (68%), Gaps = 4/569 (0%)
Query: 71 IDRAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQ 130
++R MS + NE R + LCD ++ + F H+NILC+CS YFRALFT+ ++
Sbjct: 17 MERKMSAMTCEIFNELRLEGKLCD-VVIKVNGFEFNAHKNILCSCSSYFRALFTSGWNNT 75
Query: 131 EKFSLVEIPGVDASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKR 190
EK + IPG+ +M +IEYAY R + IT DNV LL A D F + CC+F+K
Sbjct: 76 EK-KVYNIPGISPDMMKLIIEYAYTRTVPITPDNVEKLLAAADQFNIMGIVRGCCEFLKS 134
Query: 191 LTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDVARESEEIVFISEQELEEIISSDE 250
NC GI F+ ++C +L + +IL NF ++ + S E + +S EL++II DE
Sbjct: 135 ELCLDNCIGICKFTDYYYCPELRQKAYMFILHNFEEMVKVSAEFLELSVTELKDIIEKDE 194
Query: 251 LNVKSEETVWELIIRWIDYDPENRKKHIVSLMKNIRLGLLETEFFREKVKHHPYVQSTPE 310
LNVK E+ V+E I++WI +DP+NRK+HI L+ +RL L+ E+F VK + YV+ + E
Sbjct: 195 LNVKQEDAVFEAILKWISHDPQNRKQHISVLLPKVRLALMHAEYFMNNVKMNDYVKDSEE 254
Query: 311 CRPIIIETFKFLYDLELIAQIDGEVPTPEIARPRVPHEILFAIGGWSGGSPTDFVETYDT 370
C+P+II K +YDL + + + P + RPR+P+ ILFAIGGWSGGSPT+ +E YD
Sbjct: 255 CKPVIINALKAMYDLNMNGPSNSDFTNP-LTRPRLPYAILFAIGGWSGGSPTNAIEAYDA 313
Query: 371 RADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPM 430
RADRWV + + PRAYHG A + +Y+IGGFD +Y+NS + F+ V K W ++APM
Sbjct: 314 RADRWVNV-TCEEESPRAYHGAAYLKGYVYIIGGFDSVDYFNSVKRFDPVKKTWHQVAPM 372
Query: 431 NFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQ 490
+ +RCYVS V + IYAMGG++G R N+ E+Y NQW+LIAPM+ +RSDASATTL
Sbjct: 373 HSRRCYVSVTVLSNFIYAMGGFDGYVRLNTAERYEPETNQWTLIAPMHEQRSDASATTLY 432
Query: 491 GKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMS 550
GK+YI GGFNG+ CL + EVY+ E NQWT+I PMR RRSG+ IAY E +Y +GGF+G +
Sbjct: 433 GKVYICGGFNGNECLFTAEVYNTESNQWTVIAPMRSRRSGIGVIAYGEHVYAVGGFDGAN 492
Query: 551 RMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTD 610
R+ + E Y+PV TW +P M+NPRSNF IEV+DD++F +GGFNG TT ++VECYDEKTD
Sbjct: 493 RLRSAEAYSPVANTWRTIPTMFNPRSNFGIEVVDDLLFVVGGFNGFTTTFNVECYDEKTD 552
Query: 611 EWYEATDMNIYRSALSACVIMGLPNVYDY 639
EWY+A DM+IYRSALS CV+ GL NV +Y
Sbjct: 553 EWYDAHDMSIYRSALSCCVVPGLANVGEY 581
|
Mus musculus (taxid: 10090) |
| >sp|Q53G59|KLH12_HUMAN Kelch-like protein 12 OS=Homo sapiens GN=KLHL12 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 360 bits (924), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 186/555 (33%), Positives = 295/555 (53%), Gaps = 13/555 (2%)
Query: 80 MQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIP 139
+ ++N R+ N LCD T+ + + FP HR +L ACSDYF A+FT+ L ++ K V+I
Sbjct: 20 LNSMNSLRKSNTLCDVTLRV-EQKDFPAHRIVLAACSDYFCAMFTSELSEKGK-PYVDIQ 77
Query: 140 GVDASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLTTPRNCFG 199
G+ AS M L+++ Y +H+T +NV LL A + + CC+F++ P NC G
Sbjct: 78 GLTASTMEILLDFVYTETVHVTVENVQELLPAACLLQLKGVKQACCEFLESQLDPSNCLG 137
Query: 200 ILLFSRDHFCKKLEEWTRKYILRNFVDVARESEEIVFISEQELEEIISSDELNVKSEETV 259
I F+ H C L + + ++F +V + EE + +S+ E+E++I DE+ V SEE V
Sbjct: 138 IRDFAETHNCVDLMQAAEVFSQKHFPEVVQH-EEFILLSQGEVEKLIKCDEIQVDSEEPV 196
Query: 260 WELIIRWIDYDPENRKKHIVSLMKNIRLGLLETEFFREKVKHHPYVQSTPECRPIIIETF 319
+E +I W+ + + R++ + +L++ +R+ LL + + + P+++ + +CR ++ E
Sbjct: 197 FEAVINWVKHAKKEREESLPNLLQYVRMPLLTPRYITDVIDAEPFIRCSLQCRDLVDEAK 256
Query: 320 KFLYDLELIAQIDGEVPTPEIARPRVPHEILFAIGGW-SGGSPTDFVETYDTRADRWVKI 378
KF EL +Q+ G P +E+L +GG+ S SP D VE YD + W +
Sbjct: 257 KFHLRPELRSQMQG----PRTRARLGANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFL 312
Query: 379 EQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTK---VWKEIAPMNFKRC 435
+ R Y + + IYVIGG+DG +S C + VW +APMN +R
Sbjct: 313 PSITR--KRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRG 370
Query: 436 YVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYI 495
D+IY GG++G RR S+E+Y+ +QWS++ M R A G IY
Sbjct: 371 LAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYC 430
Query: 496 TGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNG 555
GG++G N LNS E YDP WT + PM +RSG ++ IYV+GGF+G + + +
Sbjct: 431 LGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSV 490
Query: 556 EKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 615
E YN T +W+ V M PR V+ ++AI G++G + + +ECYD D W
Sbjct: 491 EAYNIRTDSWTTVTSMTTPRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVV 550
Query: 616 TDMNIYRSALSACVI 630
T M R CV+
Sbjct: 551 TSMGTQRCDAGVCVL 565
|
Substrate-specific adapter of a BCR (BTB-CUL3-RBX1) E3 ubiquitin ligase complex that acts as a negative regulator of Wnt signaling pathway and ER-Golgi transport. The BCR(KLHL12) complex is involved in ER-Golgi transport by regulating the size of COPII coats, thereby playing a key role in collagen export, which is required for embryonic stem (ES) cells division: BCR(KLHL12) acts by mediating monoubiquitination of SEC31 (SEC31A or SEC31B). As part of the BCR(KLHL12) complex, also acts as a negative regulator of the Wnt signaling pathway by mediating ubiquitination and subsequent proteolysis of DVL3. The BCR(KLHL12) complex also mediates polyubiquitination of DRD4, without leading to degradation of DRD4. Homo sapiens (taxid: 9606) |
| >sp|Q8R2H4|KLH12_RAT Kelch-like protein 12 OS=Rattus norvegicus GN=Klhl12 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 357 bits (917), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 185/555 (33%), Positives = 293/555 (52%), Gaps = 13/555 (2%)
Query: 80 MQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIP 139
+ ++N R+ N LCD T+ + + FP HR +L ACSDYF A+FT+ L ++ K V+I
Sbjct: 20 LNSMNSLRKSNTLCDVTLRV-EQKDFPAHRIVLAACSDYFCAMFTSELSEKGK-PYVDIQ 77
Query: 140 GVDASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLTTPRNCFG 199
G+ AS M L+++ Y +H+T +NV LL A + + CC+F++ P NC G
Sbjct: 78 GLTASTMEILLDFVYTETVHVTVENVQELLPAACLLQLKGVKQACCEFLESQLDPSNCLG 137
Query: 200 ILLFSRDHFCKKLEEWTRKYILRNFVDVARESEEIVFISEQELEEIISSDELNVKSEETV 259
I F+ H C L + + ++F +V + EE + +S+ E+E++I DE+ V SEE V
Sbjct: 138 IRDFAETHNCVDLMQAAEVFSQKHFPEVVQH-EEFILLSQGEVEKLIKCDEIQVDSEEPV 196
Query: 260 WELIIRWIDYDPENRKKHIVSLMKNIRLGLLETEFFREKVKHHPYVQSTPECRPIIIETF 319
+E +I W+ + + R++ + L++ +R+ LL + + + P+++ + +CR ++ E
Sbjct: 197 FEAVINWVKHAKKEREESLPDLLQYVRMPLLTPRYITDVIDAEPFIRCSLQCRDLVDEAK 256
Query: 320 KFLYDLELIAQIDGEVPTPEIARPRVPHEILFAIGGW-SGGSPTDFVETYDTRADRWVKI 378
KF EL +Q+ G P +E+L +GG+ S SP D VE YD + W +
Sbjct: 257 KFHLRPELRSQMQG----PRTRARLGDNEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFL 312
Query: 379 EQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTK---VWKEIAPMNFKRC 435
+ R Y + + IYVIGG+DG +S C + VW +APMN +R
Sbjct: 313 PSI--TRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRG 370
Query: 436 YVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYI 495
D+IY GG++G RR S+E+Y+ +QWS++ M R A G IY
Sbjct: 371 LAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGIIYC 430
Query: 496 TGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNG 555
GG++G N LNS E YDP WT + PM +RSG ++ IYV+GGF+G + + +
Sbjct: 431 LGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSV 490
Query: 556 EKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 615
E YN T +W+ V M PR V+ ++AI G++G + + +ECYD D W
Sbjct: 491 EAYNIRTDSWTTVTSMTTPRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVV 550
Query: 616 TDMNIYRSALSACVI 630
M R CV+
Sbjct: 551 ASMGTQRCDAGVCVL 565
|
Substrate-specific adapter of a BCR (BTB-CUL3-RBX1) E3 ubiquitin ligase complex that acts as a negative regulator of Wnt signaling pathway and ER-Golgi transport. The BCR(KLHL12) complex is involved in ER-Golgi transport by regulating the size of COPII coats, thereby playing a key role in collagen export, which is required for embryonic stem (ES) cells division: BCR(KLHL12) acts by mediating monoubiquitination of SEC31 (SEC31A or SEC31B). As part of the BCR(KLHL12) complex, also acts as a negative regulator of the Wnt signaling pathway by mediating ubiquitination and subsequent proteolysis of DVL3. Rattus norvegicus (taxid: 10116) |
| >sp|Q8BZM0|KLH12_MOUSE Kelch-like protein 12 OS=Mus musculus GN=Klhl12 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 357 bits (915), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 184/555 (33%), Positives = 293/555 (52%), Gaps = 13/555 (2%)
Query: 80 MQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIP 139
+ ++N R+ N LCD T+ + + FP HR +L ACSDYF A+FT+ L ++ K V+I
Sbjct: 20 LNSMNSLRKSNTLCDVTLRV-EQKDFPAHRIVLAACSDYFCAMFTSELSEKGK-PYVDIQ 77
Query: 140 GVDASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLTTPRNCFG 199
G+ A+ M L+++ Y +H+T +NV LL A + + CC+F++ P NC G
Sbjct: 78 GLTAATMEILLDFVYTETVHVTVENVQELLPAACLLQLKGVKQACCEFLESQLDPSNCLG 137
Query: 200 ILLFSRDHFCKKLEEWTRKYILRNFVDVARESEEIVFISEQELEEIISSDELNVKSEETV 259
I F+ H C L + + ++F +V + EE + +S+ E+E++I DE+ V SEE V
Sbjct: 138 IRDFAETHNCVDLMQAAEVFSQKHFPEVVQH-EEFILLSQGEVEKLIKCDEIQVDSEEPV 196
Query: 260 WELIIRWIDYDPENRKKHIVSLMKNIRLGLLETEFFREKVKHHPYVQSTPECRPIIIETF 319
+E +I W+ + + R++ + L++ +R+ LL + + + P+++ + +CR ++ E
Sbjct: 197 FEAVINWVKHAKKEREESLPDLLQYVRMPLLTPRYITDVIDAEPFIRCSLQCRDLVDEAK 256
Query: 320 KFLYDLELIAQIDGEVPTPEIARPRVPHEILFAIGGW-SGGSPTDFVETYDTRADRWVKI 378
KF EL +Q+ G P +E+L +GG+ S SP D VE YD + W +
Sbjct: 257 KFHLRPELRSQMQG----PRTRARLGANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFL 312
Query: 379 EQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTK---VWKEIAPMNFKRC 435
+ R Y + + IYVIGG+DG +S C + VW +APMN +R
Sbjct: 313 PSITR--KRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRG 370
Query: 436 YVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYI 495
D+IY GG++G RR S+E+Y+ +QWS++ M R A G IY
Sbjct: 371 LAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGIIYC 430
Query: 496 TGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNG 555
GG++G N LNS E YDP WT + PM +RSG ++ IYV+GGF+G + + +
Sbjct: 431 LGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSV 490
Query: 556 EKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 615
E YN T +W+ V M PR V+ ++AI G++G + + +ECYD D W
Sbjct: 491 EAYNIRTDSWTTVTSMTTPRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVV 550
Query: 616 TDMNIYRSALSACVI 630
M R CV+
Sbjct: 551 ASMGTQRCDAGVCVL 565
|
Substrate-specific adapter of a BCR (BTB-CUL3-RBX1) E3 ubiquitin ligase complex that acts as a negative regulator of Wnt signaling pathway and ER-Golgi transport. The BCR(KLHL12) complex is involved in ER-Golgi transport by regulating the size of COPII coats, thereby playing a key role in collagen export, which is required for embryonic stem (ES) cells division: BCR(KLHL12) acts by mediating monoubiquitination of SEC31 (SEC31A or SEC31B) (By similarity). As part of the BCR(KLHL12) complex, also acts as a negative regulator of the Wnt signaling pathway by mediating ubiquitination and subsequent proteolysis of DVL3. Mus musculus (taxid: 10090) |
| >sp|Q5U374|KLH12_DANRE Kelch-like protein 12 OS=Danio rerio GN=klhl12 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 356 bits (913), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 185/555 (33%), Positives = 293/555 (52%), Gaps = 13/555 (2%)
Query: 80 MQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIP 139
+ A+N R+ N LCD T+ + + + FP HR +L ACSDYF A+FT+ L ++ K S V+I
Sbjct: 16 LNAMNALRKSNTLCDITLRV-EGTDFPAHRIVLAACSDYFCAMFTSELAEKGK-SFVDIQ 73
Query: 140 GVDASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLTTPRNCFG 199
G+ AS M L+++ Y + +T +NV LL A + + CCDF+ P NC G
Sbjct: 74 GLTASTMEILLDFVYTETVLVTVENVQELLPAACLLQLKGVKRACCDFLNSQLDPSNCLG 133
Query: 200 ILLFSRDHFCKKLEEWTRKYILRNFVDVARESEEIVFISEQELEEIISSDELNVKSEETV 259
I F+ H C L + + ++F +V ++ EE + +S+ E+E++I DE+ V SEE V
Sbjct: 134 IRDFAETHNCLDLMQAAELFSQKHFAEVVQQ-EEFMLLSQSEVEKLIKCDEIQVDSEEPV 192
Query: 260 WELIIRWIDYDPENRKKHIVSLMKNIRLGLLETEFFREKVKHHPYVQSTPECRPIIIETF 319
+E ++ W+ ++ + R+ ++ L++ +R+ LL + + + P ++ + CR ++ E
Sbjct: 193 FEAVLNWVKHNRKEREPYLPDLLEYVRMPLLTPRYITDVIDAEPLIRCSLPCRDLVDEAK 252
Query: 320 KFLYDLELIAQIDGEVPTPEIARPRVPHEILFAIGGW-SGGSPTDFVETYDTRADRWVKI 378
KF L ++ E+ +P E+L IGG+ S SP D VE YD + W +
Sbjct: 253 KF----HLRPELRSEMQSPRTQARLGAKEVLLVIGGFGSQQSPIDIVEKYDPKTREWSFL 308
Query: 379 EQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTK---VWKEIAPMNFKRC 435
+ R Y T + +YVIGG+DG +S C + VW +A MN +R
Sbjct: 309 PNI--ARKRRYVATVALNDRVYVIGGYDGRSRLSSVECLDYTADEDGVWYSVATMNVRRG 366
Query: 436 YVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYI 495
D+IY GG++G RR S+E+Y+ +QWS++ M R A G IY
Sbjct: 367 LAGATTLGDMIYVAGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGLIYC 426
Query: 496 TGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNG 555
GG++G N LNS E YDP WT + PM ++RSG ++ IYV+GGF+G + + +
Sbjct: 427 LGGYDGLNILNSVERYDPHTGHWTSVTPMANKRSGAGVALLNDHIYVVGGFDGTAHLSSV 486
Query: 556 EKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 615
E YN T W+ V +M PR V+ ++AI G++G + + +ECYD D W
Sbjct: 487 EVYNIRTDYWTTVANMTTPRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPVIDSWEVV 546
Query: 616 TDMNIYRSALSACVI 630
T M R CV+
Sbjct: 547 TSMATQRCDAGVCVL 561
|
Substrate-specific adapter of a BCR (BTB-CUL3-RBX1) E3 ubiquitin ligase complex that acts as a negative regulator of Wnt signaling pathway and ER-Golgi transport. The BCR(KLHL12) complex is involved in ER-Golgi transport by regulating the size of COPII coats, thereby playing a key role in collagen export, which is required for embryonic stem (ES) cells division (By similarity). Negatively regulates the Wnt signaling pathway, possibly via the targeted ubiquitination and subsequent proteolysis of dvl2 and dvl3. Regulates convergent-extension movements during early embryonic development. Danio rerio (taxid: 7955) |
| >sp|Q5ZKD9|KLH20_CHICK Kelch-like protein 20 OS=Gallus gallus GN=KLHL20 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 354 bits (909), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 196/592 (33%), Positives = 305/592 (51%), Gaps = 15/592 (2%)
Query: 43 DMASRLDLTEDDMTHIENAIKNKKNFSSIDRAMSVQAMQALNEFREKNLLCDATIVLADN 102
D+ SR L D + + I Q ++ +N R+ LCD +V+
Sbjct: 20 DVTSRCTL--GDPNKLPEGVPQPARMPYISDKHPRQTLEVINLLRKHRELCDVVLVVGAK 77
Query: 103 SHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIPGVDASVMTSLIEYAYLRKLHITE 162
+ HR IL ACS YFRA+FT L + + +V I +D M LI++AY ++ + E
Sbjct: 78 KIY-AHRVILSACSPYFRAMFTGELAESRQTEVV-IRDIDERAMELLIDFAYTSQITVEE 135
Query: 163 DNVASLLLATDFFCMSKAQDLCCDFIKRLTTPRNCFGILLFSRDHFCKKLEEWTRKYILR 222
NV + L A +++ Q+ CC+F+KR P NC GI F+ H C++L K+
Sbjct: 136 GNVQTSLPAACLLQLAEIQEACCEFLKRQLDPSNCLGIRAFADTHSCRELLRIADKFTQH 195
Query: 223 NFVDVARESEEIVFISEQELEEIISSDELNVKSEETVWELIIRWIDYDPENRKKHIVSLM 282
NF +V EE + + +L +IISSDELNV+SEE V+ ++ W+ Y + R+ + ++
Sbjct: 196 NFQEVMESEEEFMLLPANQLIDIISSDELNVRSEEQVFNAVMAWVKYSIQERRPQLPQVL 255
Query: 283 KNIRLGLLETEFFREKVKHHPYVQSTPECRPIIIETFKFLYDLELIAQIDGEVPTPEIAR 342
+++RL LL T+F V P ++S ECR ++ E +L L+ Q + P R
Sbjct: 256 QHVRLPLLSTKFLVGTVGSDPLIKSDEECRDLVDEAKNYL----LLPQERPLMQGPR-TR 310
Query: 343 PRVP---HEILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNI 399
PR P E+LFA+GGW G VE YD + + W + + R G +V+ +
Sbjct: 311 PRKPIRCGEVLFAVGGWCSGDAISSVERYDPQTNEWRMVASMSKR--RCGVGVSVLDDLL 368
Query: 400 YVIGGFDGNEYYNSCRCFNAVTKVWK-EIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQ 458
Y +GG DG+ Y NS ++ T W ++AP + R V AV +YA+GG +G
Sbjct: 369 YAVGGHDGSSYLNSVERYDPKTNQWSSDVAPTSTCRTSVGVAVLGGYLYAVGGQDGVSCL 428
Query: 459 NSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQW 518
N VE+Y+ EN+W+ +A M+ R + L G +Y GG +G + LN+ E Y+P+ N+W
Sbjct: 429 NIVERYDPKENKWTRVASMSTRRLGVAVAVLGGFLYAVGGSDGTSPLNTVERYNPQENRW 488
Query: 519 TLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNF 578
I PM RR + C Y + IY +GG + + + + E+YNP T WS V M + RS
Sbjct: 489 HTIAPMGTRRKHLGCAVYQDMIYAVGGRDDTTELSSAERYNPRTNQWSPVVAMTSRRSGV 548
Query: 579 AIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACVI 630
+ V++ + A+GGF+G T + +E +D + W MN R VI
Sbjct: 549 GLAVVNGQLMAVGGFDGTTYLKTIEVFDPDANTWRLYGGMNYRRLGGGVGVI 600
|
Substrate-specific adapter of a BCR (BTB-CUL3-RBX1) E3 ubiquitin-protein ligase complex involved in interferon response. The BCR(KLHL20) E3 ubiquitin ligase complex mediates the ubiquitination of target proteins, leading to their degradation by the proteasome. Gallus gallus (taxid: 9031) |
| >sp|D3Z8N4|KLH20_RAT Kelch-like protein 20 OS=Rattus norvegicus GN=Klhl20 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 354 bits (909), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 198/592 (33%), Positives = 307/592 (51%), Gaps = 16/592 (2%)
Query: 43 DMASRLDLTEDDMTHIENAIKNKKNFSSIDRAMSVQAMQALNEFREKNLLCDATIVLADN 102
D+ SR L D + + I Q ++ +N R+ LCD +V+
Sbjct: 20 DVTSRCTL--GDPNKLPEGVPQPARMPYISDKHPRQTLEVINLLRKHRELCDVVLVVGAK 77
Query: 103 SHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIPGVDASVMTSLIEYAYLRKLHITE 162
+ HR IL ACS YFRA+FT L + + +V I +D M LI++AY ++ + E
Sbjct: 78 KIY-AHRVILSACSPYFRAMFTGELAESRQTEVV-IRDIDERAMELLIDFAYTSQITVEE 135
Query: 163 DNVASLLLATDFFCMSKAQDLCCDFIKRLTTPRNCFGILLFSRDHFCKKLEEWTRKYILR 222
NV +LL A +++ Q+ CC+F+KR P NC GI F+ H C++L K+
Sbjct: 136 GNVQTLLPAACLLQLAEIQEACCEFLKRQLDPSNCLGIRAFADTHSCRELLRIADKFTQH 195
Query: 223 NFVDVARESEEIVFISEQELEEIISSDELNVKSEETVWELIIRWIDYDPENRKKHIVSLM 282
NF +V ESEE + + +L +IISSDELNV+SEE V+ ++ W+ Y + R+ + ++
Sbjct: 196 NFQEVM-ESEEFMLLPANQLIDIISSDELNVRSEEQVFNAVMAWVKYSIQERRPQLPQVL 254
Query: 283 KNIRLGLLETEFFREKVKHHPYVQSTPECRPIIIETFKFLYDLELIAQIDGEVPTPEIAR 342
+++RL LL +F V P ++S ECR ++ E +L L+ Q + P R
Sbjct: 255 QHVRLPLLSPKFLVGTVGSDPLIKSDEECRDLVDEAKNYL----LLPQERPLMQGPR-TR 309
Query: 343 PRVP---HEILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNI 399
PR P E+LFA+GGW G VE YD + + W + + R G +V+ +
Sbjct: 310 PRKPIRCGEVLFAVGGWCSGDAISSVERYDPQTNEWRMVASMSKR--RCGVGVSVLDDLL 367
Query: 400 YVIGGFDGNEYYNSCRCFNAVTKVWK-EIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQ 458
Y +GG DG+ Y NS ++ T W ++AP + R V AV +YA+GG +G
Sbjct: 368 YAVGGHDGSSYLNSVERYDPKTNQWSSDVAPTSTCRTSVGVAVLGGFLYAVGGQDGVSCL 427
Query: 459 NSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQW 518
N VE+Y+ EN+W+ +A M+ R + L G +Y GG +G + LN+ E Y+P+ N+W
Sbjct: 428 NIVERYDPKENKWTRVASMSTRRLGVAVAVLGGFLYAVGGSDGTSPLNTVERYNPQENRW 487
Query: 519 TLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNF 578
I PM RR + C Y + IY +GG + + + + E+YNP T WS V M + RS
Sbjct: 488 HTIAPMGTRRKHLGCAVYQDMIYAVGGRDDTTELSSAERYNPRTNQWSPVVAMTSRRSGV 547
Query: 579 AIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACVI 630
+ V++ + A+GGF+G T + +E +D + W MN R VI
Sbjct: 548 GLAVVNGQLMAVGGFDGTTYLKTIEVFDPDANTWRLYGGMNYRRLGGGVGVI 599
|
Substrate-specific adapter of a BCR (BTB-CUL3-RBX1) E3 ubiquitin-protein ligase complex involved in interferon response. The BCR(KLHL20) E3 ubiquitin ligase complex mediates the ubiquitination of DAPK1, leading to its degradation by the proteasome, thereby acting as a negative regulator of apoptosis. Rattus norvegicus (taxid: 10116) |
| >sp|Q9Y2M5|KLH20_HUMAN Kelch-like protein 20 OS=Homo sapiens GN=KLHL20 PE=1 SV=4 | Back alignment and function description |
|---|
Score = 354 bits (909), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 198/592 (33%), Positives = 307/592 (51%), Gaps = 16/592 (2%)
Query: 43 DMASRLDLTEDDMTHIENAIKNKKNFSSIDRAMSVQAMQALNEFREKNLLCDATIVLADN 102
D+ SR L D + + I Q ++ +N R+ LCD +V+
Sbjct: 20 DVTSRCTL--GDPNKLPEGVPQPARMPYISDKHPRQTLEVINLLRKHRELCDVVLVVGAK 77
Query: 103 SHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIPGVDASVMTSLIEYAYLRKLHITE 162
+ HR IL ACS YFRA+FT L + + +V I +D M LI++AY ++ + E
Sbjct: 78 KIY-AHRVILSACSPYFRAMFTGELAESRQTEVV-IRDIDERAMELLIDFAYTSQITVEE 135
Query: 163 DNVASLLLATDFFCMSKAQDLCCDFIKRLTTPRNCFGILLFSRDHFCKKLEEWTRKYILR 222
NV +LL A +++ Q+ CC+F+KR P NC GI F+ H C++L K+
Sbjct: 136 GNVQTLLPAACLLQLAEIQEACCEFLKRQLDPSNCLGIRAFADTHSCRELLRIADKFTQH 195
Query: 223 NFVDVARESEEIVFISEQELEEIISSDELNVKSEETVWELIIRWIDYDPENRKKHIVSLM 282
NF +V ESEE + + +L +IISSDELNV+SEE V+ ++ W+ Y + R+ + ++
Sbjct: 196 NFQEVM-ESEEFMLLPANQLIDIISSDELNVRSEEQVFNAVMAWVKYSIQERRPQLPQVL 254
Query: 283 KNIRLGLLETEFFREKVKHHPYVQSTPECRPIIIETFKFLYDLELIAQIDGEVPTPEIAR 342
+++RL LL +F V P ++S ECR ++ E +L L+ Q + P R
Sbjct: 255 QHVRLPLLSPKFLVGTVGSDPLIKSDEECRDLVDEAKNYL----LLPQERPLMQGPR-TR 309
Query: 343 PRVP---HEILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNI 399
PR P E+LFA+GGW G VE YD + + W + + R G +V+ +
Sbjct: 310 PRKPIRCGEVLFAVGGWCSGDAISSVERYDPQTNEWRMVASMSKR--RCGVGVSVLDDLL 367
Query: 400 YVIGGFDGNEYYNSCRCFNAVTKVWK-EIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQ 458
Y +GG DG+ Y NS ++ T W ++AP + R V AV +YA+GG +G
Sbjct: 368 YAVGGHDGSSYLNSVERYDPKTNQWSSDVAPTSTCRTSVGVAVLGGFLYAVGGQDGVSCL 427
Query: 459 NSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQW 518
N VE+Y+ EN+W+ +A M+ R + L G +Y GG +G + LN+ E Y+P+ N+W
Sbjct: 428 NIVERYDPKENKWTRVASMSTRRLGVAVAVLGGFLYAVGGSDGTSPLNTVERYNPQENRW 487
Query: 519 TLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNF 578
I PM RR + C Y + IY +GG + + + + E+YNP T WS V M + RS
Sbjct: 488 HTIAPMGTRRKHLGCAVYQDMIYAVGGRDDTTELSSAERYNPRTNQWSPVVAMTSRRSGV 547
Query: 579 AIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACVI 630
+ V++ + A+GGF+G T + +E +D + W MN R VI
Sbjct: 548 GLAVVNGQLMAVGGFDGTTYLKTIEVFDPDANTWRLYGGMNYRRLGGGVGVI 599
|
Substrate-specific adapter of a BCR (BTB-CUL3-RBX1) E3 ubiquitin-protein ligase complex involved in interferon response. The BCR(KLHL20) E3 ubiquitin ligase complex mediates the ubiquitination of DAPK1, leading to its degradation by the proteasome, thereby acting as a negative regulator of apoptosis. Also acts as a regulator of endothelial migration during angiogenesis by controlling the activation of Rho GTPases. Homo sapiens (taxid: 9606) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 712 | ||||||
| 110748803 | 661 | PREDICTED: kelch-like protein 10 [Apis m | 0.823 | 0.886 | 0.705 | 0.0 | |
| 340719078 | 658 | PREDICTED: kelch-like protein 10-like [B | 0.823 | 0.890 | 0.705 | 0.0 | |
| 350423278 | 658 | PREDICTED: kelch-like protein 10-like [B | 0.823 | 0.890 | 0.705 | 0.0 | |
| 380013558 | 661 | PREDICTED: kelch-like protein 10 [Apis f | 0.823 | 0.886 | 0.703 | 0.0 | |
| 242014272 | 633 | conserved hypothetical protein [Pediculu | 0.856 | 0.963 | 0.666 | 0.0 | |
| 91090540 | 669 | PREDICTED: similar to CG12423 CG12423-PA | 0.828 | 0.881 | 0.680 | 0.0 | |
| 307168569 | 659 | Kelch-like protein 10 [Camponotus florid | 0.827 | 0.893 | 0.689 | 0.0 | |
| 383859702 | 701 | PREDICTED: kelch-like protein 10-like [M | 0.853 | 0.867 | 0.627 | 0.0 | |
| 357618938 | 687 | putative Kelch-like protein 10 [Danaus p | 0.872 | 0.903 | 0.649 | 0.0 | |
| 345485137 | 628 | PREDICTED: kelch-like protein 10-like [N | 0.790 | 0.896 | 0.569 | 0.0 |
| >gi|110748803|ref|XP_395435.3| PREDICTED: kelch-like protein 10 [Apis mellifera] | Back alignment and taxonomy information |
|---|
Score = 910 bits (2351), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/587 (70%), Positives = 492/587 (83%), Gaps = 1/587 (0%)
Query: 73 RAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEK 132
R MS QAMQ+L +FR+ NLLCDA + L D FPIHR IL ACS YFR LFTT+LH +EK
Sbjct: 29 RCMSTQAMQSLYDFRQNNLLCDAVLRLEDGGVFPIHRAILSACSPYFRTLFTTTLHSREK 88
Query: 133 FSLVEIPGVDASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLT 192
++ +PGV +++M L+EYAYLR +++ +NV LL+ D+ + D CC+++K+
Sbjct: 89 TDVL-LPGVSSNMMNLLLEYAYLRSINVNNENVCQLLVTADYLNILGVLDFCCEYLKQNL 147
Query: 193 TPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDVARESEEIVFISEQELEEIISSDELN 252
P NC I+ F+R+HFCK LE +Y++R+FV VA+ SEEI+ + +EL +I +DELN
Sbjct: 148 APENCISIMRFAREHFCKGLENSAYRYVMRHFVQVAQRSEEILDLPIEELTTLIGADELN 207
Query: 253 VKSEETVWELIIRWIDYDPENRKKHIVSLMKNIRLGLLETEFFREKVKHHPYVQSTPECR 312
VKSE+TVW+L+++WIDYDP++RK +IV LMKNIRLGLL+T+FF E VK HPYV CR
Sbjct: 208 VKSEDTVWDLVLKWIDYDPQSRKDYIVDLMKNIRLGLLDTQFFLENVKDHPYVTGNEACR 267
Query: 313 PIIIETFKFLYDLELIAQIDGEVPTPEIARPRVPHEILFAIGGWSGGSPTDFVETYDTRA 372
PIIIET KFLYDLE+I Q DGEVPTP+IARPRVPHEILFAIGGWSG SPT+F+ETYDTRA
Sbjct: 268 PIIIETLKFLYDLEIITQKDGEVPTPKIARPRVPHEILFAIGGWSGRSPTNFIETYDTRA 327
Query: 373 DRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNF 432
DRWVK+E+VDP+GPRAYHGTAV+G+NIYVIGGFDG +Y+NSCRCFNAVTKVW+E+APMN
Sbjct: 328 DRWVKVEEVDPIGPRAYHGTAVVGFNIYVIGGFDGADYFNSCRCFNAVTKVWREVAPMNA 387
Query: 433 KRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGK 492
+RCYVS AV +D+IYAMGGY+G RQN+ E+YNY NQWSLIAPMN +RSDASATTL K
Sbjct: 388 RRCYVSVAVLNDLIYAMGGYDGYYRQNTAERYNYKTNQWSLIAPMNCQRSDASATTLNDK 447
Query: 493 IYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRM 552
IYITGGFNGH CLNS EVYDPE NQWT+I PMR RRSGVSCIAYH +YVIGGFNG+SRM
Sbjct: 448 IYITGGFNGHECLNSAEVYDPETNQWTIIAPMRSRRSGVSCIAYHNHVYVIGGFNGISRM 507
Query: 553 CNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEW 612
C+GEKYNP T W+ +PDMYN RSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKT+EW
Sbjct: 508 CSGEKYNPATDVWTPIPDMYNSRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTNEW 567
Query: 613 YEATDMNIYRSALSACVIMGLPNVYDYIHQHRDSLMEEKRQKLLAIE 659
YEATDMN+YRSALSACVIMGLPNV DYIH+HR+ LMEEKRQKLLA+E
Sbjct: 568 YEATDMNVYRSALSACVIMGLPNVNDYIHKHRERLMEEKRQKLLALE 614
|
Source: Apis mellifera Species: Apis mellifera Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|340719078|ref|XP_003397984.1| PREDICTED: kelch-like protein 10-like [Bombus terrestris] | Back alignment and taxonomy information |
|---|
Score = 909 bits (2350), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/587 (70%), Positives = 492/587 (83%), Gaps = 1/587 (0%)
Query: 73 RAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEK 132
R MS QAMQ+L +FR+ NLLCDA + L D FPIHR IL ACS YFR LFTT+LH +EK
Sbjct: 29 RCMSTQAMQSLYDFRQNNLLCDAVLRLEDGGVFPIHRAILSACSPYFRTLFTTTLHSREK 88
Query: 133 FSLVEIPGVDASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLT 192
++ +PGV +++M L+EYAYLR +++ +NV LL+ D+ + D CC+++K+
Sbjct: 89 TDVL-LPGVSSNMMNLLLEYAYLRSINVNNENVCQLLVTADYLNILGVLDFCCEYLKQNL 147
Query: 193 TPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDVARESEEIVFISEQELEEIISSDELN 252
P NC I+ F+R+HFCK LE +Y++R+FV VA+ SEEI+ + +EL +I +DELN
Sbjct: 148 APENCISIMRFAREHFCKGLENSAYRYVMRHFVQVAQRSEEILDLPIEELTALIGADELN 207
Query: 253 VKSEETVWELIIRWIDYDPENRKKHIVSLMKNIRLGLLETEFFREKVKHHPYVQSTPECR 312
VKSE+TVWEL+++WIDYDP++RK+ IV LMKNIRLGLL+T+FF E VK HPYV CR
Sbjct: 208 VKSEDTVWELVLKWIDYDPQSRKEFIVDLMKNIRLGLLDTQFFLENVKDHPYVTGNEACR 267
Query: 313 PIIIETFKFLYDLELIAQIDGEVPTPEIARPRVPHEILFAIGGWSGGSPTDFVETYDTRA 372
PIIIET KFLYDLE+I Q DGEVPTP+IARPRVPHEILFAIGGWSG SPT+F+ETYDTRA
Sbjct: 268 PIIIETLKFLYDLEIITQKDGEVPTPKIARPRVPHEILFAIGGWSGRSPTNFIETYDTRA 327
Query: 373 DRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNF 432
DRWVK+E+VDP+GPRAYHGTAV+G+NIYVIGGFDG +Y+NSCRCFNAVTK+W+E+APMN
Sbjct: 328 DRWVKVEEVDPIGPRAYHGTAVVGFNIYVIGGFDGADYFNSCRCFNAVTKIWREVAPMNA 387
Query: 433 KRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGK 492
+RCYVS AV +D+IYAMGGY+G RQ++ E+YNY NQWSLIAPMN +RSDASATTL K
Sbjct: 388 RRCYVSVAVLNDLIYAMGGYDGYYRQSTAERYNYKTNQWSLIAPMNCQRSDASATTLNDK 447
Query: 493 IYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRM 552
IYITGGFNGH CLNS EVYDPE NQWT+I PMR RRSGVSCIAYH +YVIGGFNG+SRM
Sbjct: 448 IYITGGFNGHECLNSAEVYDPETNQWTMIAPMRSRRSGVSCIAYHNNVYVIGGFNGISRM 507
Query: 553 CNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEW 612
C+GEKYNP T WS +PDMYN RSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKT+EW
Sbjct: 508 CSGEKYNPATDIWSPIPDMYNSRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTNEW 567
Query: 613 YEATDMNIYRSALSACVIMGLPNVYDYIHQHRDSLMEEKRQKLLAIE 659
YEATDMN+YRSALSACVIMGLPNV DYIH+HR+ LMEEKRQKLLA+E
Sbjct: 568 YEATDMNVYRSALSACVIMGLPNVNDYIHKHRERLMEEKRQKLLALE 614
|
Source: Bombus terrestris Species: Bombus terrestris Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|350423278|ref|XP_003493429.1| PREDICTED: kelch-like protein 10-like [Bombus impatiens] | Back alignment and taxonomy information |
|---|
Score = 909 bits (2348), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/587 (70%), Positives = 492/587 (83%), Gaps = 1/587 (0%)
Query: 73 RAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEK 132
R MS QAMQ+L +FR+ NLLCDA + L D FPIHR IL ACS YFR LFTT+LH +EK
Sbjct: 29 RCMSTQAMQSLYDFRQNNLLCDAVLRLEDGGVFPIHRAILSACSPYFRTLFTTTLHSREK 88
Query: 133 FSLVEIPGVDASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLT 192
++ +PGV +++M L+EYAYLR +++ +NV LL+ D+ + D CC+++K+
Sbjct: 89 TDVL-LPGVSSNMMNLLLEYAYLRSINVNNENVCQLLVTADYLNILGVLDFCCEYLKQNL 147
Query: 193 TPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDVARESEEIVFISEQELEEIISSDELN 252
P NC I+ F+R+HFCK LE +Y++R+FV VA+ SEEI+ + +EL +I +DELN
Sbjct: 148 APENCISIMRFAREHFCKGLENSAYRYVMRHFVQVAQRSEEILDLPIEELTALIGADELN 207
Query: 253 VKSEETVWELIIRWIDYDPENRKKHIVSLMKNIRLGLLETEFFREKVKHHPYVQSTPECR 312
VKSE+TVWEL+++WIDYDP++RK+ IV LMKNIRLGLL+T+FF E VK HPYV CR
Sbjct: 208 VKSEDTVWELVLKWIDYDPQSRKEFIVDLMKNIRLGLLDTQFFLENVKDHPYVTGNEACR 267
Query: 313 PIIIETFKFLYDLELIAQIDGEVPTPEIARPRVPHEILFAIGGWSGGSPTDFVETYDTRA 372
PIIIET KFLYDLE+I Q DGEVPTP+IARPRVPHEILFAIGGWSG SPT+F+ETYDTRA
Sbjct: 268 PIIIETLKFLYDLEIITQKDGEVPTPKIARPRVPHEILFAIGGWSGRSPTNFIETYDTRA 327
Query: 373 DRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNF 432
DRWVK+E+VDP+GPRAYHGTAV+G+NIYVIGGFDG +Y+NSCRCFNAVTK+W+E+APMN
Sbjct: 328 DRWVKVEEVDPIGPRAYHGTAVVGFNIYVIGGFDGADYFNSCRCFNAVTKIWREVAPMNA 387
Query: 433 KRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGK 492
+RCYVS AV +D+IYAMGGY+G RQ++ E+YNY NQWSLIAPMN +RSDASATTL K
Sbjct: 388 RRCYVSVAVLNDLIYAMGGYDGYYRQSTAERYNYKTNQWSLIAPMNCQRSDASATTLNDK 447
Query: 493 IYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRM 552
IYITGGFNGH CLNS EVYDPE NQWT+I PMR RRSGVSCIAYH +YVIGGFNG+SRM
Sbjct: 448 IYITGGFNGHECLNSAEVYDPETNQWTMIAPMRSRRSGVSCIAYHNNVYVIGGFNGISRM 507
Query: 553 CNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEW 612
C+GEKYNP T WS +PDMYN RSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKT+EW
Sbjct: 508 CSGEKYNPATDIWSPIPDMYNSRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTNEW 567
Query: 613 YEATDMNIYRSALSACVIMGLPNVYDYIHQHRDSLMEEKRQKLLAIE 659
YEATDMN+YRSALSACVIMGLPNV DYIH+HR+ LMEEKRQKLLA+E
Sbjct: 568 YEATDMNVYRSALSACVIMGLPNVNDYIHKHRERLMEEKRQKLLALE 614
|
Source: Bombus impatiens Species: Bombus impatiens Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|380013558|ref|XP_003690820.1| PREDICTED: kelch-like protein 10 [Apis florea] | Back alignment and taxonomy information |
|---|
Score = 907 bits (2343), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/587 (70%), Positives = 491/587 (83%), Gaps = 1/587 (0%)
Query: 73 RAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEK 132
R MS QAMQ+L +FR+ NLLCDA + L D FPIHR IL ACS YFR LFTT+LH +EK
Sbjct: 29 RCMSTQAMQSLYDFRQNNLLCDAVLRLEDGGVFPIHRAILSACSPYFRTLFTTTLHSREK 88
Query: 133 FSLVEIPGVDASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLT 192
++ +PGV +++M L+EYAYLR +++ +NV LL+ D+ + D CC+++K+
Sbjct: 89 TDVL-LPGVSSNMMNLLLEYAYLRSINVNNENVCQLLVTADYLNILGVLDFCCEYLKQNL 147
Query: 193 TPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDVARESEEIVFISEQELEEIISSDELN 252
P NC I+ F+R+HFCK LE +Y++R+FV VA+ SEEI+ + +EL +I +DELN
Sbjct: 148 APENCISIMRFAREHFCKGLENSAYRYVMRHFVQVAQRSEEILDLPIEELTTLIGADELN 207
Query: 253 VKSEETVWELIIRWIDYDPENRKKHIVSLMKNIRLGLLETEFFREKVKHHPYVQSTPECR 312
VKSE+TVW+L+++WIDYD ++RK +IV LMKNIRLGLL+T+FF E VK HPYV CR
Sbjct: 208 VKSEDTVWDLVLKWIDYDSQSRKDYIVDLMKNIRLGLLDTQFFLENVKDHPYVTGNEACR 267
Query: 313 PIIIETFKFLYDLELIAQIDGEVPTPEIARPRVPHEILFAIGGWSGGSPTDFVETYDTRA 372
PIIIET KFLYDLE+I Q DGEVPTP+IARPRVPHEILFAIGGWSG SPT+F+ETYDTRA
Sbjct: 268 PIIIETLKFLYDLEIITQKDGEVPTPKIARPRVPHEILFAIGGWSGRSPTNFIETYDTRA 327
Query: 373 DRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNF 432
DRWVK+E+VDP+GPRAYHGTAV+G+NIYVIGGFDG +Y+NSCRCFNAVTKVW+E+APMN
Sbjct: 328 DRWVKVEEVDPIGPRAYHGTAVVGFNIYVIGGFDGADYFNSCRCFNAVTKVWREVAPMNA 387
Query: 433 KRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGK 492
+RCYVS AV +D+IYAMGGY+G RQN+ E+YNY NQWSLIAPMN +RSDASATTL K
Sbjct: 388 RRCYVSVAVLNDLIYAMGGYDGYYRQNTAERYNYKTNQWSLIAPMNCQRSDASATTLNDK 447
Query: 493 IYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRM 552
IYITGGFNGH CLNS EVYDPE NQWT+I PMR RRSGVSCIAYH +YVIGGFNG+SRM
Sbjct: 448 IYITGGFNGHECLNSAEVYDPETNQWTIIAPMRSRRSGVSCIAYHNHVYVIGGFNGISRM 507
Query: 553 CNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEW 612
C+GEKYNP T W+ +PDMYN RSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKT+EW
Sbjct: 508 CSGEKYNPATDVWTPIPDMYNSRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTNEW 567
Query: 613 YEATDMNIYRSALSACVIMGLPNVYDYIHQHRDSLMEEKRQKLLAIE 659
YEATDMN+YRSALSACVIMGLPNV DYIH+HR+ LMEEKRQKLLA+E
Sbjct: 568 YEATDMNVYRSALSACVIMGLPNVNDYIHKHRERLMEEKRQKLLALE 614
|
Source: Apis florea Species: Apis florea Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|242014272|ref|XP_002427815.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212512284|gb|EEB15077.1| conserved hypothetical protein [Pediculus humanus corporis] | Back alignment and taxonomy information |
|---|
Score = 890 bits (2300), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/612 (66%), Positives = 498/612 (81%), Gaps = 2/612 (0%)
Query: 73 RAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEK 132
R MS QA+ +LN+ R+KNLLCDATI L D F +HR IL +CS YFRALFTT+LH ++K
Sbjct: 24 RCMSAQALNSLNDLRQKNLLCDATIRLEDGGVFHVHRAILSSCSTYFRALFTTTLHHKDK 83
Query: 133 FSLVEIPGVDASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLT 192
++ +PGV + M+ LI+YAYLR + +T NV +LL+ D+ C+ +LCC+++K +
Sbjct: 84 TDVL-LPGVTSDTMSRLIDYAYLRTIELTPTNVYTLLVTADYLCVIGVLNLCCEYLKSIL 142
Query: 193 TPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDVARESEEIVFISEQELEEIISSDELN 252
P NC G++ F+R+HFC LE+ YI+RNF + +S+E++ + +EL+ +I +DELN
Sbjct: 143 KPENCIGVMRFAREHFCTSLEKEAWMYIMRNFSQLMNKSQELLELPLEELKAMIGADELN 202
Query: 253 VKSEETVWELIIRWIDYDPENRKKHIVSLMKNIRLGLLETEFFREKVKHHPYVQSTPECR 312
VK EE VWE +++WI++D +NRK IV LM+NIRLGLLET+FF EKVK HPYV CR
Sbjct: 203 VKGEEIVWETVLKWIEFDVDNRKPFIVELMRNIRLGLLETQFFLEKVKDHPYVAGNEACR 262
Query: 313 PIIIETFKFLYDLELIAQIDGEVPTPEIARPRVPHEILFAIGGWSGGSPTDFVETYDTRA 372
P+IIET +FLYDLE+I Q DGEVPTPEIARPRVPHEILFAIGGWSGGSPT+++ETYDTRA
Sbjct: 263 PVIIETLRFLYDLEMITQKDGEVPTPEIARPRVPHEILFAIGGWSGGSPTNYIETYDTRA 322
Query: 373 DRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNF 432
DRWV++E+VDP GPRAYHGTAV+ +NIYVIGGFDG +Y+NSCRCF+AV K W E+APMN
Sbjct: 323 DRWVRVEEVDPTGPRAYHGTAVVDFNIYVIGGFDGMDYFNSCRCFDAVKKTWHEVAPMNA 382
Query: 433 KRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGK 492
+RCYVS AV +IYAMGGY+G RQN+ EKYNY NQWSLIA MNV+RSDASATTL K
Sbjct: 383 RRCYVSVAVLGTIIYAMGGYDGHHRQNTAEKYNYKYNQWSLIASMNVQRSDASATTLNNK 442
Query: 493 IYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRM 552
IYITGGFNG C+NS EVYDPE NQWT+I MR RRSGVSCI YH C+YVIGGFNG+SRM
Sbjct: 443 IYITGGFNGQECMNSAEVYDPEVNQWTMITAMRSRRSGVSCITYHGCVYVIGGFNGISRM 502
Query: 553 CNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEW 612
C+GEKYNPVT WS +PDMYNPRSNFAIEVIDDMIFAIGGFNGVTTI+HVECYDEKT+EW
Sbjct: 503 CSGEKYNPVTNAWSHIPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIFHVECYDEKTNEW 562
Query: 613 YEATDMNIYRSALSACVIMGLPNVYDYIHQHRDSLMEEKRQKLLAIEGRQRQNQSEEGNS 672
YEATDMNIYRSALSACVIMGLPNVYDYIH+HR+ LMEEKRQKLLA+E QRQ+Q ++
Sbjct: 563 YEATDMNIYRSALSACVIMGLPNVYDYIHKHRERLMEEKRQKLLALEN-QRQHQVANTHA 621
Query: 673 SQQSVLPSSNSN 684
+ + +P + ++
Sbjct: 622 VENTNIPHNQAS 633
|
Source: Pediculus humanus corporis Species: Pediculus humanus Genus: Pediculus Family: Pediculidae Order: Phthiraptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|91090540|ref|XP_970878.1| PREDICTED: similar to CG12423 CG12423-PA [Tribolium castaneum] gi|270013882|gb|EFA10330.1| hypothetical protein TcasGA2_TC012547 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
Score = 887 bits (2292), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/592 (68%), Positives = 493/592 (83%), Gaps = 2/592 (0%)
Query: 73 RAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEK 132
R MS+QAMQ L + RE N LCDA IVL D + PIHR +LCACS+YF+A FTT LH++ +
Sbjct: 10 RCMSMQAMQTLYDLRENNQLCDAIIVLDDGTEIPIHRALLCACSNYFKAAFTTLLHNKNE 69
Query: 133 FSLVEIPGVDASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLT 192
+ V+IPGV + +M LI YAYLRKL + ++NV +L+ D+ M A ++CC +++ +
Sbjct: 70 -TKVQIPGVSSEMMHILINYAYLRKLDLNKNNVFDVLITADYLSMLGALEMCCKYLENIL 128
Query: 193 TPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDVARESEEIVFISEQELEEIISSDELN 252
+ +NC GILLF+R+HFC L + ++I++NF+ +A++S+E++ ++ ++ +EII++D LN
Sbjct: 129 SAKNCIGILLFARNHFCTDLAQACWRFIMKNFIQIAQQSDELLMLALKDFQEIINADNLN 188
Query: 253 VKSEETVWELIIRWIDYDPENRKKHIVSLMKNIRLGLLETEFFREKVKHHPYVQSTPECR 312
VKSEE VWE I++WIDYDPE RK HIV+LMK IRLGLLET+FF EKVK HPYV S E R
Sbjct: 189 VKSEEIVWETILKWIDYDPEQRKAHIVTLMKCIRLGLLETQFFMEKVKDHPYVTSCEESR 248
Query: 313 PIIIETFKFLYDLELIAQIDGEVPTPEIARPRVPHEILFAIGGWSGGSPTDFVETYDTRA 372
P++IET KFLYDLE I +GEV TPEIARPR+PHE+LFAIGGWSGGSPT+++ETYDTRA
Sbjct: 249 PMVIETLKFLYDLERIMHKNGEVVTPEIARPRLPHEVLFAIGGWSGGSPTNYIETYDTRA 308
Query: 373 DRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNF 432
DRWVKIE+VDP GPRAYHGTAV+GYNIYVIGGFDG +Y+NSCRCF+ V K WKEIAPM+
Sbjct: 309 DRWVKIEEVDPAGPRAYHGTAVVGYNIYVIGGFDGMDYFNSCRCFDPVKKAWKEIAPMHA 368
Query: 433 KRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGK 492
+RCYVSTAV +++IYAMGGY+G RQN+ EKY+Y NQWSLIA MN++RSDASA L K
Sbjct: 369 RRCYVSTAVLNNIIYAMGGYDGHHRQNTAEKYDYKTNQWSLIASMNMQRSDASACNLNNK 428
Query: 493 IYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRM 552
IYITGGFNG C++S EVYDPE NQWTLI MR RRSGVSCIAYH+ +YVIGGFNG+SRM
Sbjct: 429 IYITGGFNGQECMHSAEVYDPELNQWTLISAMRSRRSGVSCIAYHDYVYVIGGFNGISRM 488
Query: 553 CNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEW 612
C+GEKYNP + TW+ VPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKT+EW
Sbjct: 489 CSGEKYNPQSNTWTPVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTNEW 548
Query: 613 YEATDMNIYRSALSACVIMGLPNVYDYIHQHRDSLMEEKRQKLLAIEGRQRQ 664
YEATDMNIYRSALSACV+ GLPN+ DYIH+HRD LMEEKRQK++A+E QRQ
Sbjct: 549 YEATDMNIYRSALSACVVDGLPNIEDYIHKHRDKLMEEKRQKMIALES-QRQ 599
|
Source: Tribolium castaneum Species: Tribolium castaneum Genus: Tribolium Family: Tenebrionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307168569|gb|EFN61627.1| Kelch-like protein 10 [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
Score = 885 bits (2287), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/590 (68%), Positives = 485/590 (82%), Gaps = 1/590 (0%)
Query: 73 RAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEK 132
R MS QAMQ+L +FR+ NLLCDA + L D FPIHR IL ACS YFR LFTT+LH +EK
Sbjct: 29 RCMSTQAMQSLYDFRQNNLLCDAVLRLEDGGVFPIHRAILSACSIYFRTLFTTTLHSREK 88
Query: 133 FSLVEIPGVDASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLT 192
++ +PGV + +M L+EYAYLR + + +NV LL D+ + DLCCD+++
Sbjct: 89 TDVL-LPGVTSPMMNLLLEYAYLRSIDVNRENVCELLTTADYLSILGVLDLCCDYLRDNL 147
Query: 193 TPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDVARESEEIVFISEQELEEIISSDELN 252
P NC G++ F+R HFCKKLE ++I+ +FV+V++ SEEI+ + +EL+ ++ +DELN
Sbjct: 148 APENCIGVMRFARQHFCKKLENDAYRFIVGHFVEVSQRSEEILHLPIEELKPLVGADELN 207
Query: 253 VKSEETVWELIIRWIDYDPENRKKHIVSLMKNIRLGLLETEFFREKVKHHPYVQSTPECR 312
VKSE+TVWELI+RWI++D E+RK +IV LMKNIRLGLL+T+FF E VK HPYV CR
Sbjct: 208 VKSEQTVWELILRWINHDVESRKDYIVDLMKNIRLGLLDTQFFLENVKDHPYVVGNDACR 267
Query: 313 PIIIETFKFLYDLELIAQIDGEVPTPEIARPRVPHEILFAIGGWSGGSPTDFVETYDTRA 372
PIIIET KFLYDLE+I Q DGEVPTPEIARPRVPHEILFAIGGWSGGSPT+++ETYDTRA
Sbjct: 268 PIIIETLKFLYDLEMITQKDGEVPTPEIARPRVPHEILFAIGGWSGGSPTNYIETYDTRA 327
Query: 373 DRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNF 432
DRW+ IE+ DP PRAYHG AVIG+NIYVIGGFDG +Y+NSCRCFNAVTKVW+E+APMN
Sbjct: 328 DRWIPIEETDPTSPRAYHGLAVIGFNIYVIGGFDGVDYFNSCRCFNAVTKVWREVAPMNA 387
Query: 433 KRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGK 492
+RCYVS AV +D+IYAMGGY+G RQ + E+Y+Y NQWSLIAPMNV+RSDASATTL K
Sbjct: 388 RRCYVSVAVLNDLIYAMGGYDGYHRQKTAERYDYKTNQWSLIAPMNVQRSDASATTLNDK 447
Query: 493 IYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRM 552
IYITGGF+GH+CLN+ EVYDP NQWT+I MR RRSGVSCI+YH +YVIGGFNG+SRM
Sbjct: 448 IYITGGFDGHDCLNTAEVYDPNTNQWTMITAMRSRRSGVSCISYHGYVYVIGGFNGISRM 507
Query: 553 CNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEW 612
C+GEKY P T TWS +PDMYNPRSNFAIEVIDDMIFAIGGFNGVTT Y VECYDEKT+EW
Sbjct: 508 CSGEKYKPSTNTWSHIPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTTYQVECYDEKTNEW 567
Query: 613 YEATDMNIYRSALSACVIMGLPNVYDYIHQHRDSLMEEKRQKLLAIEGRQ 662
YEATDMNI RSALSACVIMGLPN+YDYIH+HR+ LMEEKRQKLLA E R+
Sbjct: 568 YEATDMNICRSALSACVIMGLPNIYDYIHKHRERLMEEKRQKLLAHEVRR 617
|
Source: Camponotus floridanus Species: Camponotus floridanus Genus: Camponotus Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383859702|ref|XP_003705331.1| PREDICTED: kelch-like protein 10-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 872 bits (2253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/658 (62%), Positives = 502/658 (76%), Gaps = 50/658 (7%)
Query: 73 RAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEK 132
R MS QAMQ+L +FR+ NLLCDA I L D FPIHR IL ACS YFR LFTT+LH +EK
Sbjct: 29 RCMSTQAMQSLYDFRQNNLLCDAVIRLEDGGIFPIHRAILSACSPYFRTLFTTTLHCREK 88
Query: 133 FSLVEIPGVDASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLT 192
++ +PGV +++M L+EYAYLR + I +NV LL+ D+ + +LCC+++K+
Sbjct: 89 TDVL-LPGVTSNMMNLLLEYAYLRSISINNENVYQLLVTADYLNVLGVLELCCEYLKQNL 147
Query: 193 TPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDV------------------------- 227
P NC ++ F+R+HFCK LE T +Y++R FV V
Sbjct: 148 APENCISVMRFAREHFCKGLENSTYRYVMRYFVQVIILLPALNYPTDNYGFNILLIKPGI 207
Query: 228 ---------------------ARESEEIVFISEQELEEIISSDELNVKSEETVWELIIRW 266
A+ S+EI+ + +EL +I +DELNVKSE+TVWEL+++W
Sbjct: 208 NHSSQTFAVNRQCNKLYWTQVAQRSKEILELPIEELTALIGADELNVKSEDTVWELVLKW 267
Query: 267 IDYDPENRKKHIVSLMKNIRLGLLETEFFREKVKHHPYVQSTPECRPIIIETFKFLYDLE 326
ID+DP+ RKK+IV LMKNIRLGLL+T+FF E VK HPYV CRPIIIET KFLYDLE
Sbjct: 268 IDHDPQARKKYIVDLMKNIRLGLLDTQFFLENVKDHPYVTGNDACRPIIIETLKFLYDLE 327
Query: 327 LIAQIDGEVPTPEIARPRVPHEILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGP 386
+I Q DGE+PTP+IARPRVPHEILFAIGGWSG SPT+F+ETYDTRADRWVK+ VDP+GP
Sbjct: 328 IITQKDGEIPTPKIARPRVPHEILFAIGGWSGSSPTNFIETYDTRADRWVKV-YVDPIGP 386
Query: 387 RAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVI 446
RAYH TAV+G+NIYVIGGF+G++Y+NSCRCFNAVTKVW+EIAPMN +RCYVS AV +D+I
Sbjct: 387 RAYHSTAVVGFNIYVIGGFNGSDYFNSCRCFNAVTKVWREIAPMNARRCYVSVAVLNDLI 446
Query: 447 YAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLN 506
YAMGGY+G RQ++ E+YNY NQWSLIA MN +RSDASATTL KIY+TGGFNGH CLN
Sbjct: 447 YAMGGYDGYYRQSTAERYNYKTNQWSLIASMNCQRSDASATTLNDKIYVTGGFNGHECLN 506
Query: 507 SCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWS 566
S EVY+PE NQWT+I PMR RRSGVSCIAYH +YVIGGFNG+SRMC+GE+YNP T W+
Sbjct: 507 SAEVYNPETNQWTMIAPMRSRRSGVSCIAYHGHVYVIGGFNGISRMCSGERYNPTTNVWT 566
Query: 567 QVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALS 626
+PDMYN RSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKT+EWYEATDMN+YRSALS
Sbjct: 567 PIPDMYNSRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTNEWYEATDMNVYRSALS 626
Query: 627 ACVIMGLPNVYDYIHQHRDSLMEEKRQKLLAIE--GRQRQNQSEEGNSSQQSVLPSSN 682
ACVIMGLPNV DYIH+HR+ LMEEKRQKLLA+E Q Q Q ++ + +++++L N
Sbjct: 627 ACVIMGLPNVNDYIHKHRERLMEEKRQKLLALEVHRSQHQRQQDQAHQNRENILNHEN 684
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|357618938|gb|EHJ71722.1| putative Kelch-like protein 10 [Danaus plexippus] | Back alignment and taxonomy information |
|---|
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/628 (64%), Positives = 483/628 (76%), Gaps = 7/628 (1%)
Query: 58 IENAIKNKKNFSSIDRAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSD 117
+EN N R MSV AMQAL+ RE LLCDA + D + FP+HR IL ACS
Sbjct: 1 MENGPNNTTAGRETGRCMSVAAMQALHRLRECRLLCDAIVRADDGAAFPVHRAILSACSP 60
Query: 118 YFRALFTTSLHDQEKFSLVEIPGVDASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCM 177
YF ALFTT+LH +E+ S V I GV + ++ LIEYAYLR++ +T+ NV LL+ D+
Sbjct: 61 YFLALFTTTLHSREQ-SDVLISGVRSEILLLLIEYAYLRRIEVTDTNVHELLMTADYLAF 119
Query: 178 SKAQDLCCDFIKRLTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDVARESEEIVFI 237
LC D +K P+NC GI++F+R FC KLE +R+Y+LR FV VA +S+E + +
Sbjct: 120 LGVLQLCSDHLKAALNPKNCLGIMMFARRVFCYKLEADSRRYLLRYFVTVATQSDEFLHL 179
Query: 238 SEQELEEIISSDELNVKSEETVWELIIRWIDYDPENRKKHIVSLMKNIRLGLLETEFFRE 297
EL II DELNVKSEE VWE ++RW++YDP+ R H V LM +IRLGLL+T+FF E
Sbjct: 180 PIDELNSIILEDELNVKSEEVVWEAVLRWVNYDPDVRWHHTVKLMGSIRLGLLDTQFFLE 239
Query: 298 KVKHHPYVQSTPECRPIIIETFKFLYDLELIAQIDGEVPTPEIARPRVPHEILFAIGGWS 357
VK HPYV RPIIIET KFLYDLE+IAQ DGEV TPEIARPRVPHE+LFAIGGWS
Sbjct: 240 NVKDHPYVTGNEGSRPIIIETLKFLYDLEMIAQRDGEVATPEIARPRVPHEVLFAIGGWS 299
Query: 358 GGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCF 417
GGSPT F+ETYDTRADRW+K+E+VDP GPRAYHGTAV+GY IYVIGGFDG +Y+NSCRCF
Sbjct: 300 GGSPTAFIETYDTRADRWIKVEEVDPAGPRAYHGTAVLGYCIYVIGGFDGMDYFNSCRCF 359
Query: 418 NAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPM 477
+AV KVW+E+APMN +RCYVS AV + IYAMGGY+G RQN+ E++N+ NQWSL+APM
Sbjct: 360 DAVAKVWREVAPMNARRCYVSVAVLGETIYAMGGYDGHHRQNTAERFNHRTNQWSLVAPM 419
Query: 478 NVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYH 537
N +RSDASA L KIYITGGFNG C+NS EVYDP+ NQWT + PMR RRSGVSCIAYH
Sbjct: 420 NAQRSDASAAALDNKIYITGGFNGQECMNSVEVYDPDTNQWTNLAPMRSRRSGVSCIAYH 479
Query: 538 ECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVT 597
IYVIGGFNG+SRMC+GE ++P T TWS VPDMYNPRSNFAIEVIDDMIFAIGGFNGVT
Sbjct: 480 NKIYVIGGFNGISRMCSGEVFDPNTNTWSPVPDMYNPRSNFAIEVIDDMIFAIGGFNGVT 539
Query: 598 TIYHVECYDEKTDEWYEATDMNIYRSALSACVIMGLPNVYDYIHQHRDSLMEEKRQKLLA 657
TIYHVECYDE+T+EWYEATDMNIYRSALSACVIMGLPNVYDYIH+HR+ LMEEKRQK+L
Sbjct: 540 TIYHVECYDERTNEWYEATDMNIYRSALSACVIMGLPNVYDYIHKHRERLMEEKRQKILL 599
Query: 658 IE-GRQRQNQSE-----EGNSSQQSVLP 679
E R Q+++ G+S Q +P
Sbjct: 600 SETARHGQHRTALPDGPRGDSRYQHNVP 627
|
Source: Danaus plexippus Species: Danaus plexippus Genus: Danaus Family: Nymphalidae Order: Lepidoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|345485137|ref|XP_001605004.2| PREDICTED: kelch-like protein 10-like [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 744 bits (1921), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/615 (56%), Positives = 436/615 (70%), Gaps = 52/615 (8%)
Query: 73 RAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEK 132
R +S Q +Q+LN+ R+ NLLCDA + L D FP+HR IL ACS YFR LFTT+L+ +
Sbjct: 57 RCVSTQGLQSLNDLRQNNLLCDAVLKLEDGGVFPVHRAILSACSTYFRTLFTTTLNPKNN 116
Query: 133 FSLVEIPGVDASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLT 192
+ + V + +M L+EYAYLR + I +++V LL+ D+ + +LCCDF++R
Sbjct: 117 TEFL-VSNVSSKIMNLLLEYAYLRTIDIKQEDVCELLITADYLVIDGVLELCCDFLRRSL 175
Query: 193 TPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDVARESEEIVFISEQELEEIISSDELN 252
T +NC GI++F+R+HFCK LE+ R+Y+LR FV
Sbjct: 176 TVKNCIGIMIFAREHFCKDLEKEARRYLLRYFVQ-------------------------- 209
Query: 253 VKSEETVWELIIRWIDYDPENRKKHIVSLMKNIRLGLLETEFFREKVKHHPYVQSTPECR 312
PE RK HIV LM+NIRLGL++T +F E VK+H YV CR
Sbjct: 210 ------------------PETRKVHIVELMRNIRLGLMDTYYFLENVKNHHYVAGNEACR 251
Query: 313 PIIIETFKFLYDLELIAQIDGEVPTPEIARPRVPHEILFAIGGWSGGSPTDFVETYDTRA 372
PI+IET KFLYD E+I Q DGE+ EIA PRVPH+ILFAIGGW G S D +ETYDTRA
Sbjct: 252 PIVIETLKFLYDPEMIKQKDGEL---EIATPRVPHDILFAIGGWQGVSAVDLIETYDTRA 308
Query: 373 DRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNF 432
DRWVK+EQ+DP+GPR YHG AVIGY IYVIGG +G E++NSCRCFN V K W+E+APMN
Sbjct: 309 DRWVKVEQIDPLGPRGYHGMAVIGYKIYVIGGLNGVEFFNSCRCFNPVRKTWREVAPMNA 368
Query: 433 KRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGK 492
KR YVS A+ +D+IYAMGGY+G RQNS E+Y+Y NQWSLIAPM+++RSDASAT L GK
Sbjct: 369 KRAYVSVALLNDIIYAMGGYDGYFRQNSAERYDYRRNQWSLIAPMHMQRSDASATALNGK 428
Query: 493 IYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRM 552
IYITGGFNG C++S EVYDP+ NQWT+I MR RRSGVSCIAYH +Y +GGFNG+SRM
Sbjct: 429 IYITGGFNGRECMSSAEVYDPDTNQWTMIAHMRLRRSGVSCIAYHGLVYALGGFNGVSRM 488
Query: 553 CNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEW 612
C GEKYNP T TW+ +PDMYN RSNFAIE+IDDMIFAIGGFNG +T +HVEC+ + T+EW
Sbjct: 489 CCGEKYNPETNTWTAIPDMYNSRSNFAIEIIDDMIFAIGGFNGFSTTFHVECFSDSTNEW 548
Query: 613 YEATDMNIYRSALSACVIMGLPNVYDYIHQHRDSLMEEKRQKLLAIEGRQRQNQSEEGNS 672
YEATDMN YRS L+ACV+ LPNV+DY H+HR+ LMEEKRQKLL IE QR + +
Sbjct: 549 YEATDMNTYRSGLAACVVKVLPNVHDYTHKHRERLMEEKRQKLLDIEALQRAGSAPQ--- 605
Query: 673 SQQSVLPSSNSNVSS 687
QQ+ + +S S +S
Sbjct: 606 -QQNHVATSRSTHNS 619
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 712 | ||||||
| FB|FBgn0040038 | 767 | klhl10 [Drosophila melanogaste | 0.883 | 0.820 | 0.498 | 5e-170 | |
| UNIPROTKB|Q6JEL2 | 608 | KLHL10 "Kelch-like protein 10" | 0.800 | 0.937 | 0.488 | 3.5e-155 | |
| UNIPROTKB|F1MBZ1 | 608 | KLHL10 "Uncharacterized protei | 0.800 | 0.937 | 0.487 | 1.2e-154 | |
| MGI|MGI:2181067 | 608 | Klhl10 "kelch-like 10" [Mus mu | 0.800 | 0.937 | 0.487 | 1.2e-154 | |
| RGD|1303290 | 608 | Klhl10 "kelch-like family memb | 0.800 | 0.937 | 0.487 | 1.2e-154 | |
| UNIPROTKB|F1Q2G6 | 608 | KLHL10 "Uncharacterized protei | 0.800 | 0.937 | 0.485 | 8.2e-154 | |
| UNIPROTKB|F1NTA7 | 591 | KLHL10 "Uncharacterized protei | 0.796 | 0.959 | 0.492 | 3.2e-152 | |
| UNIPROTKB|Q53G59 | 568 | KLHL12 "Kelch-like protein 12" | 0.776 | 0.973 | 0.324 | 2.9e-87 | |
| UNIPROTKB|F1S4N0 | 606 | KLHL12 "Uncharacterized protei | 0.776 | 0.912 | 0.324 | 7.7e-87 | |
| UNIPROTKB|Q16RL8 | 589 | dbo "Kelch-like protein diablo | 0.778 | 0.940 | 0.338 | 7.7e-87 |
| FB|FBgn0040038 klhl10 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 1653 (586.9 bits), Expect = 5.0e-170, P = 5.0e-170
Identities = 322/646 (49%), Positives = 431/646 (66%)
Query: 23 DTDFSLKIRASTIGYLPISEDMASRLDLTED-DMTHIENAIKNKKNFSSIDRAMSVQAMQ 81
D F+L + ++ L ++ D S D T I NA + K+ + I +S +A+
Sbjct: 16 DLPFALALPPVSMDSLQLNADGNSPEDKTLGIGRKTILNA--HTKSLAPI---VSDEALN 70
Query: 82 ALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHD----------QE 131
LNE RE+NLLCDA I + ++ F +HR I+C+CS YFRA FT D ++
Sbjct: 71 TLNELREQNLLCDAQISVGEDV-FNVHRAIMCSCSSYFRAQFTGFNADTPGCVDGSDAKK 129
Query: 132 KFSLVEIPGVDASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRL 191
+ + IPGV + +M +I+YAYLR+ +I+E NV LL+ D+ M C D++ R+
Sbjct: 130 NNNFIHIPGVSSCIMNCVIQYAYLRQTNISESNVHELLICADYVGMVGLVKKCKDYLGRI 189
Query: 192 TTPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDVARESEEIVFXXXXXXXXXXXXXXL 251
TP NC I+ F+R F + L R Y LR F +VA + +I+ L
Sbjct: 190 LTPENCVSIMGFARFRFLEDLHLKARNYTLRYFTEVAYRNIDILDMSAEDFYSIISDDEL 249
Query: 252 NVKSEETVWELIIRWIDYDPENRKKHIVSLMKNIRLGLLETEFFREKVKHHPYVQSTPEC 311
N + E+ VW+L ++WID +PE+RK+H+ LM +RLGL+ + F E+VK HPYV
Sbjct: 250 NTREEDHVWKLCVKWIDRNPESRKRHVAHLMTGVRLGLMTPKCFMEEVKEHPYVLECEAA 309
Query: 312 RPIIIETFKFLYDLELIAQIDGEVPTPEIARPRVPHEILFAIGGWSGGSPTDFVETYDTR 371
+P+I++TFKF+YDL+ + E+ TP +A PR+PHE++FAIGGWSGG+ +ETYDTR
Sbjct: 310 KPLIVDTFKFMYDLDFLNPQADELTTPPLAMPRLPHEVIFAIGGWSGGTSKGCIETYDTR 369
Query: 372 ADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMN 431
ADRWV I DP GPRAYHGTAV+G+ I+ IGG+DG EY+N+CR F+AV K W EIAPM+
Sbjct: 370 ADRWVTINAEDPAGPRAYHGTAVLGFKIFSIGGYDGVEYFNTCRVFDAVKKKWNEIAPMH 429
Query: 432 FKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQG 491
+RCYVS + +IYA+GGY+G R N+VE+YN NQWS+I PMN++RSDASA TLQ
Sbjct: 430 CRRCYVSVTELNGMIYAIGGYDGHNRLNTVERYNPRTNQWSVIPPMNMQRSDASACTLQE 489
Query: 492 KIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSR 551
+IY TGGFNG CL+S E YDP N WT I M HRRSGVSC+A+ +YVIGGFNG +R
Sbjct: 490 RIYATGGFNGQECLDSAEYYDPVTNVWTRIPNMNHRRSGVSCVAFRNQLYVIGGFNGTAR 549
Query: 552 MCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDE 611
+ GE+++P T+TW + +M + RSNF +E+IDDMIFAIGGFNGV+TI H ECY +TDE
Sbjct: 550 LSTGERFDPDTQTWHFIREMNHSRSNFGLEIIDDMIFAIGGFNGVSTISHTECYVAETDE 609
Query: 612 WYEATDMNIYRSALSACVIMGLPNVYDYIHQHRDSLMEEKRQKLLA 657
W EATDMNI RSALSA I GLPN DYIH+ RD LMEE+RQ+L+A
Sbjct: 610 WMEATDMNIVRSALSANNIAGLPNKRDYIHKERDRLMEERRQRLMA 655
|
|
| UNIPROTKB|Q6JEL2 KLHL10 "Kelch-like protein 10" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1513 (537.7 bits), Expect = 3.5e-155, P = 3.5e-155
Identities = 282/577 (48%), Positives = 385/577 (66%)
Query: 71 IDRAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQ 130
++R MS A + NE R + LCD ++ + F H+NILC+CS YFRALFT+ ++
Sbjct: 17 MERKMSAMACEIFNELRLEGKLCDV-VIKVNGFEFSAHKNILCSCSSYFRALFTSGWNNT 75
Query: 131 EKFSLVEIPGVDASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKR 190
EK + IPG+ +M +IEYAY R + IT DNV LL A D F + CC+F+K
Sbjct: 76 EK-KVYNIPGISPDMMKLIIEYAYTRTVPITPDNVEKLLAAADQFNIMGIVRGCCEFLKS 134
Query: 191 LTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDVARESEEIVFXXXXXXXXXXXXXX 250
NC GI F+ ++C +L + +IL NF ++ + S E +
Sbjct: 135 ELCLDNCIGICKFTDYYYCPELRQKAYMFILHNFEEMVKVSAEFLELSVTELKDIIEKDE 194
Query: 251 LNVKSEETVWELIIRWIDYDPENRKKHIVSLMKNIRLGLLETEFFREKVKHHPYVQSTPE 310
LNVK E+ V+E I++WI +DP+NRK+HI L+ +RL L+ E+F VK + YV+ + E
Sbjct: 195 LNVKQEDAVFEAILKWISHDPQNRKQHISILLPKVRLALMHAEYFMNNVKMNDYVKDSEE 254
Query: 311 CRPIIIETFKFLYDLELIAQIDGEVPTPEIARPRVPHEILFAIGGWSGGSPTDFVETYDT 370
C+P+II K +YDL + + + P + RPR+P+ ILFAIGGWSGGSPT+ +E YD
Sbjct: 255 CKPVIINALKAMYDLNMNGPSNSDFTNP-LTRPRLPYAILFAIGGWSGGSPTNAIEAYDA 313
Query: 371 RADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAP 429
RADRWV + + PRAYHG A + GY +Y+IGGFD +Y+NS + F+ V K W ++AP
Sbjct: 314 RADRWVNVT-CEEESPRAYHGAAYLKGY-VYIIGGFDSVDYFNSVKRFDPVKKTWHQVAP 371
Query: 430 MNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL 489
M+ +RCYVS V + IYAMGG++G R N+ E+Y NQW+LIAPM+ +RSDASATTL
Sbjct: 372 MHSRRCYVSVTVLGNFIYAMGGFDGYVRLNTAERYEPETNQWTLIAPMHEQRSDASATTL 431
Query: 490 QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGM 549
GK+YI GGFNG+ CL + EVY+ E NQWT+I PMR RRSG+ IAY E +Y +GGF+G
Sbjct: 432 YGKVYICGGFNGNECLFTAEVYNTESNQWTVIAPMRSRRSGIGVIAYGEHVYAVGGFDGA 491
Query: 550 SRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKT 609
+R+ + E Y+PV TW +P M+NPRSNF IEV+DD++F +GGFNG TT ++VECYDEKT
Sbjct: 492 NRLRSAEAYSPVANTWRTIPTMFNPRSNFGIEVVDDLLFVVGGFNGFTTTFNVECYDEKT 551
Query: 610 DEWYEATDMNIYRSALSACVIMGLPNVYDYIHQHRDS 646
DEWY+A DM+IYRSALS CV+ GL NV +Y + RD+
Sbjct: 552 DEWYDAHDMSIYRSALSCCVVPGLANVEEYAAR-RDN 587
|
|
| UNIPROTKB|F1MBZ1 KLHL10 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1508 (535.9 bits), Expect = 1.2e-154, P = 1.2e-154
Identities = 281/577 (48%), Positives = 384/577 (66%)
Query: 71 IDRAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQ 130
++R MS + NE R + LCD ++ + F H+NILC+CS YFRALFT+ ++
Sbjct: 17 MERKMSAMTCEIFNELRLEGKLCDV-VIKVNGFEFNAHKNILCSCSSYFRALFTSGWNNT 75
Query: 131 EKFSLVEIPGVDASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKR 190
EK + IPG+ +M +IEYAY R + IT DNV LL A D F + CC+F+K
Sbjct: 76 EK-KVYNIPGISPDMMKLIIEYAYTRTVPITPDNVEKLLAAADQFNIMGIVRGCCEFLKS 134
Query: 191 LTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDVARESEEIVFXXXXXXXXXXXXXX 250
NC GI F+ ++C +L + +IL NF ++ + S E +
Sbjct: 135 ELCLDNCIGICKFTDYYYCPELRQKAYMFILHNFEEMVKVSAEFLELSVTELKDIIEKDE 194
Query: 251 LNVKSEETVWELIIRWIDYDPENRKKHIVSLMKNIRLGLLETEFFREKVKHHPYVQSTPE 310
LNVK E+ V+E I++WI +DP+NRK+HI L+ +RL L+ E+F VK + YV+ + E
Sbjct: 195 LNVKQEDAVFEAILKWISHDPQNRKQHISVLLPKVRLALMHAEYFMNNVKMNDYVKDSEE 254
Query: 311 CRPIIIETFKFLYDLELIAQIDGEVPTPEIARPRVPHEILFAIGGWSGGSPTDFVETYDT 370
C+P+II K +YDL + + + P + RPR+P+ ILFAIGGWSGGSPT+ +E YD
Sbjct: 255 CKPVIINALKAMYDLNMNGPSNSDFTNP-LTRPRLPYAILFAIGGWSGGSPTNAIEAYDA 313
Query: 371 RADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAP 429
RADRWV + + PRAYHG A + GY +Y+IGGFD +Y+NS + F+ V K W ++AP
Sbjct: 314 RADRWVNVT-CEEESPRAYHGAAYLKGY-VYIIGGFDSVDYFNSVKRFDPVKKTWHQVAP 371
Query: 430 MNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL 489
M+ +RCYVS V + IYAMGG++G R N+ E+Y NQW+LIAPM+ +RSDASATTL
Sbjct: 372 MHSRRCYVSVTVLSNFIYAMGGFDGYVRLNTAERYEPETNQWTLIAPMHEQRSDASATTL 431
Query: 490 QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGM 549
GK+YI GGFNG+ CL + EVY+ E NQWT+I PMR RRSG+ IAY E +Y +GGF+G
Sbjct: 432 YGKVYICGGFNGNECLFTAEVYNAESNQWTVIAPMRSRRSGIGVIAYGEHVYAVGGFDGA 491
Query: 550 SRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKT 609
+R+ + E Y+PV TW +P M+NPRSNF IEV+DD++F +GGFNG TT ++VECYDEKT
Sbjct: 492 NRLRSAEAYSPVANTWRTIPTMFNPRSNFGIEVVDDLLFVVGGFNGFTTTFNVECYDEKT 551
Query: 610 DEWYEATDMNIYRSALSACVIMGLPNVYDYIHQHRDS 646
DEWY+A DM+IYRSALS CV+ GL NV +Y + RD+
Sbjct: 552 DEWYDAHDMSIYRSALSCCVVPGLANVGEYAAR-RDN 587
|
|
| MGI|MGI:2181067 Klhl10 "kelch-like 10" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1508 (535.9 bits), Expect = 1.2e-154, P = 1.2e-154
Identities = 281/577 (48%), Positives = 384/577 (66%)
Query: 71 IDRAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQ 130
++R MS + NE R + LCD ++ + F H+NILC+CS YFRALFT+ ++
Sbjct: 17 MERKMSAMTCEIFNELRLEGKLCDV-VIKVNGFEFNAHKNILCSCSSYFRALFTSGWNNT 75
Query: 131 EKFSLVEIPGVDASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKR 190
EK + IPG+ +M +IEYAY R + IT DNV LL A D F + CC+F+K
Sbjct: 76 EK-KVYNIPGISPDMMKLIIEYAYTRTVPITPDNVEKLLAAADQFNIMGIVRGCCEFLKS 134
Query: 191 LTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDVARESEEIVFXXXXXXXXXXXXXX 250
NC GI F+ ++C +L + +IL NF ++ + S E +
Sbjct: 135 ELCLDNCIGICKFTDYYYCPELRQKAYMFILHNFEEMVKVSAEFLELSVTELKDIIEKDE 194
Query: 251 LNVKSEETVWELIIRWIDYDPENRKKHIVSLMKNIRLGLLETEFFREKVKHHPYVQSTPE 310
LNVK E+ V+E I++WI +DP+NRK+HI L+ +RL L+ E+F VK + YV+ + E
Sbjct: 195 LNVKQEDAVFEAILKWISHDPQNRKQHISVLLPKVRLALMHAEYFMNNVKMNDYVKDSEE 254
Query: 311 CRPIIIETFKFLYDLELIAQIDGEVPTPEIARPRVPHEILFAIGGWSGGSPTDFVETYDT 370
C+P+II K +YDL + + + P + RPR+P+ ILFAIGGWSGGSPT+ +E YD
Sbjct: 255 CKPVIINALKAMYDLNMNGPSNSDFTNP-LTRPRLPYAILFAIGGWSGGSPTNAIEAYDA 313
Query: 371 RADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAP 429
RADRWV + + PRAYHG A + GY +Y+IGGFD +Y+NS + F+ V K W ++AP
Sbjct: 314 RADRWVNVT-CEEESPRAYHGAAYLKGY-VYIIGGFDSVDYFNSVKRFDPVKKTWHQVAP 371
Query: 430 MNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL 489
M+ +RCYVS V + IYAMGG++G R N+ E+Y NQW+LIAPM+ +RSDASATTL
Sbjct: 372 MHSRRCYVSVTVLSNFIYAMGGFDGYVRLNTAERYEPETNQWTLIAPMHEQRSDASATTL 431
Query: 490 QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGM 549
GK+YI GGFNG+ CL + EVY+ E NQWT+I PMR RRSG+ IAY E +Y +GGF+G
Sbjct: 432 YGKVYICGGFNGNECLFTAEVYNTESNQWTVIAPMRSRRSGIGVIAYGEHVYAVGGFDGA 491
Query: 550 SRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKT 609
+R+ + E Y+PV TW +P M+NPRSNF IEV+DD++F +GGFNG TT ++VECYDEKT
Sbjct: 492 NRLRSAEAYSPVANTWRTIPTMFNPRSNFGIEVVDDLLFVVGGFNGFTTTFNVECYDEKT 551
Query: 610 DEWYEATDMNIYRSALSACVIMGLPNVYDYIHQHRDS 646
DEWY+A DM+IYRSALS CV+ GL NV +Y + RD+
Sbjct: 552 DEWYDAHDMSIYRSALSCCVVPGLANVGEYAAR-RDN 587
|
|
| RGD|1303290 Klhl10 "kelch-like family member 10" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1508 (535.9 bits), Expect = 1.2e-154, P = 1.2e-154
Identities = 281/577 (48%), Positives = 384/577 (66%)
Query: 71 IDRAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQ 130
++R MS + NE R + LCD ++ + F H+NILC+CS YFRALFT+ ++
Sbjct: 17 MERKMSAMTCEIFNELRLEGKLCDV-VIKVNGFEFNAHKNILCSCSSYFRALFTSGWNNT 75
Query: 131 EKFSLVEIPGVDASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKR 190
EK + IPG+ +M +IEYAY R + IT DNV LL A D F + CC+F+K
Sbjct: 76 EK-KVYNIPGISPDMMKLIIEYAYTRTVPITPDNVEKLLAAADQFNIMGIVRGCCEFLKS 134
Query: 191 LTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDVARESEEIVFXXXXXXXXXXXXXX 250
NC GI F+ ++C +L + +IL NF ++ + S E +
Sbjct: 135 ELCLDNCIGICKFTDYYYCPELRQKAYMFILHNFEEMVKVSAEFLELSVTELKDIIEKDE 194
Query: 251 LNVKSEETVWELIIRWIDYDPENRKKHIVSLMKNIRLGLLETEFFREKVKHHPYVQSTPE 310
LNVK E+ V+E I++WI +DP+NRK+HI L+ +RL L+ E+F VK + YV+ + E
Sbjct: 195 LNVKQEDAVFEAILKWISHDPQNRKQHISVLLPKVRLALMHAEYFMNNVKMNDYVKDSEE 254
Query: 311 CRPIIIETFKFLYDLELIAQIDGEVPTPEIARPRVPHEILFAIGGWSGGSPTDFVETYDT 370
C+P+II K +YDL + + + P + RPR+P+ ILFAIGGWSGGSPT+ +E YD
Sbjct: 255 CKPVIINALKAMYDLNMNGPSNSDFTNP-LTRPRLPYAILFAIGGWSGGSPTNAIEAYDA 313
Query: 371 RADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAP 429
RADRWV + + PRAYHG A + GY +Y+IGGFD +Y+NS + F+ V K W ++AP
Sbjct: 314 RADRWVNVT-CEEESPRAYHGAAYLKGY-VYIIGGFDSVDYFNSVKRFDPVKKTWHQVAP 371
Query: 430 MNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL 489
M+ +RCYVS V + IYAMGG++G R N+ E+Y NQW+LIAPM+ +RSDASATTL
Sbjct: 372 MHSRRCYVSVTVLSNFIYAMGGFDGYVRLNTAERYEPETNQWTLIAPMHEQRSDASATTL 431
Query: 490 QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGM 549
GK+YI GGFNG+ CL + EVY+ E NQWT+I PMR RRSG+ IAY E +Y +GGF+G
Sbjct: 432 YGKVYICGGFNGNECLFTAEVYNTESNQWTVIAPMRSRRSGIGVIAYGEHVYAVGGFDGA 491
Query: 550 SRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKT 609
+R+ + E Y+PV TW +P M+NPRSNF IEV+DD++F +GGFNG TT ++VECYDEKT
Sbjct: 492 NRLRSAEAYSPVANTWRTIPTMFNPRSNFGIEVVDDLLFVVGGFNGFTTTFNVECYDEKT 551
Query: 610 DEWYEATDMNIYRSALSACVIMGLPNVYDYIHQHRDS 646
DEWY+A DM+IYRSALS CV+ GL NV +Y + RD+
Sbjct: 552 DEWYDAHDMSIYRSALSCCVVPGLANVGEYAAR-RDN 587
|
|
| UNIPROTKB|F1Q2G6 KLHL10 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1500 (533.1 bits), Expect = 8.2e-154, P = 8.2e-154
Identities = 280/577 (48%), Positives = 383/577 (66%)
Query: 71 IDRAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQ 130
++R MS + NE R + LCD ++ + F H+NILC+CS YFRALFT+ ++
Sbjct: 17 MERKMSAMTCEIFNELRLEGKLCDV-VIKVNGFEFNAHKNILCSCSSYFRALFTSGWNNT 75
Query: 131 EKFSLVEIPGVDASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKR 190
EK + IPG+ +M +IEYAY R + IT DNV LL A D F + CC+F+K
Sbjct: 76 EK-KVYNIPGISPDMMKLIIEYAYTRTVPITPDNVEKLLAAADQFNIMGIVRGCCEFLKS 134
Query: 191 LTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDVARESEEIVFXXXXXXXXXXXXXX 250
NC GI F+ ++C +L + +IL NF ++ + S E +
Sbjct: 135 ELCLDNCIGICKFTDYYYCPELRQKAYMFILHNFEEMVKVSAEFLELSVTELKDIIEKDE 194
Query: 251 LNVKSEETVWELIIRWIDYDPENRKKHIVSLMKNIRLGLLETEFFREKVKHHPYVQSTPE 310
LNVK E+ V+E I++WI +D +NRK+HI L+ +RL L+ E+F VK + YV+ + E
Sbjct: 195 LNVKQEDAVFEAILKWISHDSQNRKQHISVLLPKVRLALMHAEYFMNNVKMNDYVKDSEE 254
Query: 311 CRPIIIETFKFLYDLELIAQIDGEVPTPEIARPRVPHEILFAIGGWSGGSPTDFVETYDT 370
C+P+II K +YDL + + + P + RPR+P+ ILFAIGGWSGGSPT+ +E YD
Sbjct: 255 CKPVIINALKAMYDLNMNGPSNSDFTNP-LTRPRLPYAILFAIGGWSGGSPTNAIEAYDA 313
Query: 371 RADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAP 429
RADRWV + + PRAYHG A + GY +Y+IGGFD +Y+NS + F+ V K W ++AP
Sbjct: 314 RADRWVNVT-CEEESPRAYHGAAYLKGY-VYIIGGFDSVDYFNSVKRFDPVKKTWHQVAP 371
Query: 430 MNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL 489
M+ +RCYVS V + IYAMGG++G R N+ E+Y NQW+LIAPM+ +RSDASATTL
Sbjct: 372 MHSRRCYVSVTVLSNFIYAMGGFDGYVRLNTAERYEPETNQWTLIAPMHEQRSDASATTL 431
Query: 490 QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGM 549
GK+YI GGFNG+ CL + EVY+ E NQWT+I PMR RRSG+ IAY E +Y +GGF+G
Sbjct: 432 YGKVYICGGFNGNECLFTAEVYNTESNQWTVIAPMRSRRSGIGVIAYGEHVYAVGGFDGA 491
Query: 550 SRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKT 609
+R+ + E Y+PV TW +P M+NPRSNF IEV+DD++F +GGFNG TT ++VECYDEKT
Sbjct: 492 NRLRSAEAYSPVANTWRTIPTMFNPRSNFGIEVVDDLLFVVGGFNGFTTTFNVECYDEKT 551
Query: 610 DEWYEATDMNIYRSALSACVIMGLPNVYDYIHQHRDS 646
DEWY+A DM+IYRSALS CV+ GL NV +Y + RD+
Sbjct: 552 DEWYDAHDMSIYRSALSCCVVPGLANVGEYAAR-RDN 587
|
|
| UNIPROTKB|F1NTA7 KLHL10 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1485 (527.8 bits), Expect = 3.2e-152, P = 3.2e-152
Identities = 281/571 (49%), Positives = 375/571 (65%)
Query: 69 SSIDRAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLH 128
S ++R MS A + NE R + LCD I+ + F H+NILC+CS YFRALFT+ +
Sbjct: 20 SLMERKMSAMACEVFNELRLEGKLCDV-IIDVNGCQFNAHKNILCSCSHYFRALFTSGWN 78
Query: 129 DQEKFSLVEIPGVDASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFI 188
+ EK + +IPG+ +M +IEYAY R + IT DNV SLL D F + LCC+F+
Sbjct: 79 NMEKV-VYKIPGISPEMMKLVIEYAYTRTVSITADNVESLLGTADQFNIMGIIRLCCEFL 137
Query: 189 KRLTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDVARESEEIVFXXXXXXXXXXXX 248
K NC GI + + C L + +IL NF ++ + S E +
Sbjct: 138 KSQLCLENCIGICRLTNYYHCPGLRQTAYMFILHNFEELIKVSTEFLDLSIHELTDIIEK 197
Query: 249 XXLNVKSEETVWELIIRWIDYDPENRKKHIVSLMKNIRLGLLETEFFREKVKHHPYVQST 308
LNVK EE V++ I++WI +DP +RK+HI L+ +RL L+E + F KVK H YV+
Sbjct: 198 DELNVKQEEVVFDAILKWITHDPWHRKQHIPILLSKVRLALMEADHFMNKVKTHDYVKDN 257
Query: 309 PECRPIIIETFKFLYDLELIAQIDGEVPTPEIARPRVPHEILFAIGGWSGGSPTDFVETY 368
EC+PIII T +Y+L + + P +ARPR+P+ ILFAIGGWSGGSPT+ +ETY
Sbjct: 258 NECKPIIINTLTAMYNLNTNNPVLSDRINP-LARPRLPYSILFAIGGWSGGSPTNAIETY 316
Query: 369 DTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIA 428
DTRAD+WV + + PRAYHGTA + +YVIGGFD +Y+NS + F+ V K W ++A
Sbjct: 317 DTRADKWVNVTCHEE-SPRAYHGTAFLKGFVYVIGGFDSVDYFNSVKRFDPVKKTWHQVA 375
Query: 429 PMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATT 488
PM+ +RCYVS V +D IYAMGG++G R N+ E+Y NQW+LIAPM+ +RSDA ATT
Sbjct: 376 PMHSRRCYVSVTVLNDFIYAMGGFDGYTRLNTAERYEPQTNQWTLIAPMHEQRSDAGATT 435
Query: 489 LQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNG 548
L K+YI GGFNG+ CL++ EVYD +QWT I PMR RRSGV IAY +Y +GGF+G
Sbjct: 436 LHDKVYICGGFNGNECLSTAEVYDAGTDQWTFISPMRSRRSGVGVIAYGNQVYAVGGFDG 495
Query: 549 MSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEK 608
++R+ E YNP TW VP M+NPRSNF IEV+DD++F +GGFNG T ++VECYDEK
Sbjct: 496 VNRLRTVEAYNPAANTWRVVPTMFNPRSNFGIEVVDDLLFVVGGFNGYATTFNVECYDEK 555
Query: 609 TDEWYEATDMNIYRSALSACVIMGLPNVYDY 639
DEW++A DM++YRSALS CV+ GL NV DY
Sbjct: 556 ADEWFDAQDMSVYRSALSCCVVPGLCNVGDY 586
|
|
| UNIPROTKB|Q53G59 KLHL12 "Kelch-like protein 12" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 872 (312.0 bits), Expect = 2.9e-87, P = 2.9e-87
Identities = 185/570 (32%), Positives = 293/570 (51%)
Query: 66 KNFSSIDRAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTT 125
K+ + A S+ + ++N R+ N LCD T+ + + FP HR +L ACSDYF A+FT+
Sbjct: 8 KDIMTNTHAKSI--LNSMNSLRKSNTLCDVTLRV-EQKDFPAHRIVLAACSDYFCAMFTS 64
Query: 126 SLHDQEKFSLVEIPGVDASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCC 185
L ++ K V+I G+ AS M L+++ Y +H+T +NV LL A + + CC
Sbjct: 65 ELSEKGK-PYVDIQGLTASTMEILLDFVYTETVHVTVENVQELLPAACLLQLKGVKQACC 123
Query: 186 DFIKRLTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDVARESEEIVFXXXXXXXXX 245
+F++ P NC GI F+ H C L + + ++F +V + EE +
Sbjct: 124 EFLESQLDPSNCLGIRDFAETHNCVDLMQAAEVFSQKHFPEVVQH-EEFILLSQGEVEKL 182
Query: 246 XXXXXLNVKSEETVWELIIRWIDYDPENRKKHIVSLMKNIRLGLLETEFFREKVKHHPYV 305
+ V SEE V+E +I W+ + + R++ + +L++ +R+ LL + + + P++
Sbjct: 183 IKCDEIQVDSEEPVFEAVINWVKHAKKEREESLPNLLQYVRMPLLTPRYITDVIDAEPFI 242
Query: 306 QSTPECRPIIIETFKFLYDLELIAQIDGEVPTPEIARPRV-PHEILFAIGGW-SGGSPTD 363
+ + +CR ++ E KF EL +Q+ G P R R+ +E+L +GG+ S SP D
Sbjct: 243 RCSLQCRDLVDEAKKFHLRPELRSQMQG----PR-TRARLGANEVLLVVGGFGSQQSPID 297
Query: 364 FVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTK- 422
VE YD + W + + R Y + + IYVIGG+DG +S C +
Sbjct: 298 VVEKYDPKTQEWSFLPSITRK--RRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADE 355
Query: 423 --VWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVE 480
VW +APMN +R D+IY GG++G RR S+E+Y+ +QWS++ M
Sbjct: 356 DGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTA 415
Query: 481 RSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECI 540
R A G IY GG++G N LNS E YDP WT + PM +RSG ++ I
Sbjct: 416 REGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHI 475
Query: 541 YVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIY 600
YV+GGF+G + + + E YN T +W+ V M PR V+ ++AI G++G + +
Sbjct: 476 YVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVLRGRLYAIAGYDGNSLLS 535
Query: 601 HVECYDEKTDEWYEATDMNIYRSALSACVI 630
+ECYD D W T M R CV+
Sbjct: 536 SIECYDPIIDSWEVVTSMGTQRCDAGVCVL 565
|
|
| UNIPROTKB|F1S4N0 KLHL12 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 868 (310.6 bits), Expect = 7.7e-87, P = 7.7e-87
Identities = 185/570 (32%), Positives = 291/570 (51%)
Query: 66 KNFSSIDRAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTT 125
K+ + A S+ + ++N R+ N LCD T+ + + FP HR +L ACSDYF A+FT+
Sbjct: 46 KDIMTNTHAKSI--LNSMNSLRKSNTLCDVTLRV-EQKDFPAHRIVLAACSDYFCAMFTS 102
Query: 126 SLHDQEKFSLVEIPGVDASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCC 185
L ++ K V+I G+ AS M L+++ Y +H+T +NV LL A + + CC
Sbjct: 103 ELSEKGK-PYVDIQGLTASTMEILLDFVYTETVHVTVENVQELLPAACLLQLKGVKQACC 161
Query: 186 DFIKRLTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDVARESEEIVFXXXXXXXXX 245
+F++ P NC GI F+ H C L + + ++F +V + EE +
Sbjct: 162 EFLESQLDPSNCLGIRDFAETHNCVDLMQAAEVFSQKHFPEVVQH-EEFILLSQGEVEKL 220
Query: 246 XXXXXLNVKSEETVWELIIRWIDYDPENRKKHIVSLMKNIRLGLLETEFFREKVKHHPYV 305
+ V SEE V+E +I W+ + R++ + L++ +R+ LL + + + P++
Sbjct: 221 IKCDEIQVDSEEPVFEAVINWVKHAKREREECLPDLLQYVRMPLLTPRYITDVIDAEPFI 280
Query: 306 QSTPECRPIIIETFKFLYDLELIAQIDGEVPTPEIARPRV-PHEILFAIGGW-SGGSPTD 363
+ + +CR ++ E KF EL +Q+ G P R R+ +E+L +GG+ S SP D
Sbjct: 281 RCSLQCRDLVDEAKKFHLRPELRSQMQG----PR-TRARLGANEVLLVVGGFGSQQSPID 335
Query: 364 FVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTK- 422
VE YD + W + + R Y + + IYVIGG+DG +S C +
Sbjct: 336 VVEKYDPKTQEWSFLPSITRK--RRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADE 393
Query: 423 --VWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVE 480
VW +APMN +R D+IY GG++G RR S+E+Y+ +QWS++ M
Sbjct: 394 DGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTA 453
Query: 481 RSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECI 540
R A G IY GG++G N LNS E YDP WT + PM +RSG ++ I
Sbjct: 454 REGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHI 513
Query: 541 YVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIY 600
YV+GGF+G + + + E YN T +W+ V M PR V+ ++AI G++G + +
Sbjct: 514 YVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVLRGRLYAIAGYDGNSLLS 573
Query: 601 HVECYDEKTDEWYEATDMNIYRSALSACVI 630
+ECYD D W T M R CV+
Sbjct: 574 SIECYDPIIDSWEVVTSMGTQRCDAGVCVL 603
|
|
| UNIPROTKB|Q16RL8 dbo "Kelch-like protein diablo" [Aedes aegypti (taxid:7159)] | Back alignment and assigned GO terms |
|---|
Score = 868 (310.6 bits), Expect = 7.7e-87, P = 7.7e-87
Identities = 193/571 (33%), Positives = 293/571 (51%)
Query: 83 LNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIPGVD 142
LN R LCD I ++ F HR IL ACS YFRA+FT L + + V I +D
Sbjct: 31 LNVLRRHRELCDVVINVSGRKIFA-HRVILSACSPYFRAMFTGELEESRQTE-VTIRDID 88
Query: 143 ASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLTTPRNCFGILL 202
+ M LI++ Y + + E NV +LL A +++ QD+CC+F+KR P NC GI
Sbjct: 89 ENAMELLIDFCYTSHIVVEESNVQTLLPAACLLQLAEIQDICCEFLKRQLDPTNCLGIRA 148
Query: 203 FSRDHFCKKLEEWTRKYILRNFVDVARESEEIVFXXXXXXXXXXXXXXLNVKSEETVWEL 262
F+ H C++L K+ NF +V ESEE + LNV+SEE V+
Sbjct: 149 FADTHSCRELLRIADKFTQHNFQEVM-ESEEFLLLPVGQLVDIICSDELNVRSEEQVFNA 207
Query: 263 IIRWIDYDPENRKKHIVSLMKNIRLGLLETEFFREKVKHHPYVQSTPECRPIIIETFKFL 322
++ W+ Y+ R++H+ +++++R+ LL +F V V+S CR ++ E +L
Sbjct: 208 VMAWLKYNVAERRQHLAQVLQHVRMPLLSPKFLVGTVGSDLLVRSDEACRDLVDEAKNYL 267
Query: 323 YDLELIAQIDGEVPTPEIARPRVPH---EILFAIGGWSGGSPTDFVETYDTRADRWVKIE 379
L+ Q + P RPR P E+LFA+GGW G VE +D W +
Sbjct: 268 ----LLPQERPLMQGPR-TRPRKPTRRGEVLFAVGGWCSGDAIASVERFDPETADW---K 319
Query: 380 QVDPMGPRAYH-GTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWK-EIAPMNFKRCYV 437
V PM R G AV+ +Y +GG DG Y NS ++ T W ++AP R V
Sbjct: 320 MVAPMSKRRCGVGVAVLNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSV 379
Query: 438 STAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITG 497
AV +YA+GG +G + N VE+Y+ EN+WS +APM R + L G +Y G
Sbjct: 380 GVAVLDGFLYAVGGQDGVQCLNHVERYDPKENKWSKVAPMTTRRLGVAVAVLGGYLYAIG 439
Query: 498 GFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEK 557
G +G LN+ E YDP N+W + PM RR + C ++ IY +GG + + + E+
Sbjct: 440 GSDGQCPLNTVERYDPRQNKWCAVSPMSTRRKHLGCAVFNNFIYAVGGRDDCMELSSAER 499
Query: 558 YNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATD 617
YNP T +WS + M + RS + V++ ++A+GGF+G + +E YD +T++W
Sbjct: 500 YNPHTNSWSPIVAMTSRRSGVGLAVVNGQLYAVGGFDGTAYLKTIEVYDPETNQWRLCGC 559
Query: 618 MNIYRSALSACVIMGLPNVYDYIHQHRDSLM 648
MN YR +M P +Y+ +DS++
Sbjct: 560 MN-YRRLGGGVGVMRAPQTENYMWIRKDSVV 589
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9D5V2 | KLH10_MOUSE | No assigned EC number | 0.4991 | 0.7935 | 0.9292 | yes | N/A |
| Q2M0J9 | KLHDB_DROPS | No assigned EC number | 0.3410 | 0.7752 | 0.8789 | yes | N/A |
| Q6JEL2 | KLH10_HUMAN | No assigned EC number | 0.5008 | 0.7935 | 0.9292 | yes | N/A |
| Q6JEL3 | KLH10_RAT | No assigned EC number | 0.4991 | 0.7935 | 0.9292 | yes | N/A |
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 712 | |||
| PHA03098 | 534 | PHA03098, PHA03098, kelch-like protein; Provisiona | 3e-74 | |
| pfam07707 | 101 | pfam07707, BACK, BTB And C-terminal Kelch | 3e-32 | |
| smart00875 | 101 | smart00875, BACK, BTB And C-terminal Kelch | 3e-29 | |
| PHA02790 | 480 | PHA02790, PHA02790, Kelch-like protein; Provisiona | 3e-27 | |
| pfam00651 | 101 | pfam00651, BTB, BTB/POZ domain | 8e-25 | |
| PHA03098 | 534 | PHA03098, PHA03098, kelch-like protein; Provisiona | 4e-23 | |
| smart00225 | 97 | smart00225, BTB, Broad-Complex, Tramtrack and Bric | 1e-19 | |
| smart00612 | 47 | smart00612, Kelch, Kelch domain | 3e-15 | |
| PLN02193 | 470 | PLN02193, PLN02193, nitrile-specifier protein | 3e-14 | |
| pfam01344 | 46 | pfam01344, Kelch_1, Kelch motif | 7e-13 | |
| PLN02193 | 470 | PLN02193, PLN02193, nitrile-specifier protein | 8e-13 | |
| smart00612 | 47 | smart00612, Kelch, Kelch domain | 3e-12 | |
| pfam01344 | 46 | pfam01344, Kelch_1, Kelch motif | 3e-12 | |
| pfam01344 | 46 | pfam01344, Kelch_1, Kelch motif | 4e-12 | |
| smart00612 | 47 | smart00612, Kelch, Kelch domain | 7e-12 | |
| PHA02713 | 557 | PHA02713, PHA02713, hypothetical protein; Provisio | 1e-11 | |
| PHA03098 | 534 | PHA03098, PHA03098, kelch-like protein; Provisiona | 2e-11 | |
| smart00612 | 47 | smart00612, Kelch, Kelch domain | 2e-11 | |
| pfam01344 | 46 | pfam01344, Kelch_1, Kelch motif | 4e-11 | |
| PLN02153 | 341 | PLN02153, PLN02153, epithiospecifier protein | 5e-11 | |
| pfam01344 | 46 | pfam01344, Kelch_1, Kelch motif | 7e-11 | |
| smart00612 | 47 | smart00612, Kelch, Kelch domain | 1e-10 | |
| PHA02713 | 557 | PHA02713, PHA02713, hypothetical protein; Provisio | 5e-09 | |
| TIGR03548 | 323 | TIGR03548, mutarot_permut, cyclically-permuted mut | 3e-08 | |
| pfam13964 | 50 | pfam13964, Kelch_6, Kelch motif | 9e-08 | |
| pfam13964 | 50 | pfam13964, Kelch_6, Kelch motif | 1e-07 | |
| PHA02713 | 557 | PHA02713, PHA02713, hypothetical protein; Provisio | 9e-07 | |
| pfam13964 | 50 | pfam13964, Kelch_6, Kelch motif | 9e-07 | |
| smart00612 | 47 | smart00612, Kelch, Kelch domain | 1e-05 | |
| pfam13964 | 50 | pfam13964, Kelch_6, Kelch motif | 2e-05 | |
| pfam13415 | 48 | pfam13415, Kelch_3, Galactose oxidase, central dom | 5e-05 | |
| pfam13418 | 49 | pfam13418, Kelch_4, Galactose oxidase, central dom | 7e-05 | |
| pfam13418 | 49 | pfam13418, Kelch_4, Galactose oxidase, central dom | 1e-04 | |
| pfam13415 | 48 | pfam13415, Kelch_3, Galactose oxidase, central dom | 2e-04 | |
| pfam01344 | 46 | pfam01344, Kelch_1, Kelch motif | 3e-04 | |
| PRK14131 | 376 | PRK14131, PRK14131, N-acetylneuraminic acid mutaro | 3e-04 | |
| PRK14131 | 376 | PRK14131, PRK14131, N-acetylneuraminic acid mutaro | 3e-04 | |
| TIGR03547 | 346 | TIGR03547, muta_rot_YjhT, mutatrotase, YjhT family | 3e-04 | |
| TIGR03547 | 346 | TIGR03547, muta_rot_YjhT, mutatrotase, YjhT family | 5e-04 | |
| pfam13964 | 50 | pfam13964, Kelch_6, Kelch motif | 6e-04 | |
| pfam13415 | 48 | pfam13415, Kelch_3, Galactose oxidase, central dom | 6e-04 | |
| COG3055 | 381 | COG3055, COG3055, Uncharacterized protein conserve | 0.003 |
| >gnl|CDD|222983 PHA03098, PHA03098, kelch-like protein; Provisional | Back alignment and domain information |
|---|
Score = 249 bits (637), Expect = 3e-74
Identities = 134/534 (25%), Positives = 233/534 (43%), Gaps = 40/534 (7%)
Query: 93 CDATIVL-ADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIP-GVDASVMTSLI 150
CD +I++ +H+ IL + S+YF+ +F + F EI +D +I
Sbjct: 10 CDESIIIVNGGGIIKVHKIILSSSSEYFKKMF------KNNFKENEINLNIDYDSFNEVI 63
Query: 151 EYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLTTPRNCFGILLFSRDHFCK 210
+Y Y K++IT +NV +L ++ + +LC ++I ++ NC I FS + CK
Sbjct: 64 KYIYTGKINITSNNVKDILSIANYLIIDFLINLCINYIIKIIDDNNCIDIYRFSFFYGCK 123
Query: 211 KLEEWTRKYILRNFVDVARESEEIVFISEQELEEIISSDELNVKSEETVWELIIRWIDYD 270
KL YI N + + +++S+ EL +I+S D+LNV SE+ V E+II+W+
Sbjct: 124 KLYSAAYNYIRNNIELIYN-DPDFIYLSKNELIKILSDDKLNVSSEDVVLEIIIKWLTSK 182
Query: 271 PENRKKHIVSLMKNIRLGLLETEFF------REKVKHHPYVQSTPECRPIIIETFKFLYD 324
N+ K I ++K +R+ L E + ++K V + C II L
Sbjct: 183 KNNKYKDICLILKVLRITFLSEEGIKKLKRWKLRIKKKKIVFNK-RCIKIIYSKKYNL-- 239
Query: 325 LELIAQIDGEVPTPEIARPRVPHEILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPM 384
+ +P + I +++ Y +I + +
Sbjct: 240 -------NKILPRSS------TFGSIIYIHITMSIFTYNYITNY----SPLSEINTIIDI 282
Query: 385 GPRAYHGTAVIGYNIYVIGGFDGNEY-YNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHH 443
G+ V+ IY IGG + N NS ++ TK W ++ + + R V +
Sbjct: 283 HYVYCFGSVVLNNVIYFIGGMNKNNLSVNSVVSYDTKTKSWNKVPELIYPRKNPGVTVFN 342
Query: 444 DVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGG-FNGH 502
+ IY +GG N+VE + E++W P+ R + + IY+ GG
Sbjct: 343 NRIYVIGGIYNSISLNTVESWKPGESKWREEPPLIFPRYNPCVVNVNNLIYVIGGISKND 402
Query: 503 NCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGF---NGMSRMCNGEKYN 559
L + E + N+W+ P+ G I + IYVIGG + + E YN
Sbjct: 403 ELLKTVECFSLNTNKWSKGSPLPISHYGGCAIYHDGKIYVIGGISYIDNIKVYNIVESYN 462
Query: 560 PVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWY 613
PVT W+++ + PR N ++ + ++ I+ +GG I +E YD+KT+ W
Sbjct: 463 PVTNKWTELSSLNFPRINASLCIFNNKIYVVGGDKYEYYINEIEVYDDKTNTWT 516
|
Length = 534 |
| >gnl|CDD|149006 pfam07707, BACK, BTB And C-terminal Kelch | Back alignment and domain information |
|---|
Score = 119 bits (302), Expect = 3e-32
Identities = 45/101 (44%), Positives = 73/101 (72%), Gaps = 1/101 (0%)
Query: 197 CFGILLFSRDHFCKKLEEWTRKYILRNFVDVARESEEIVFISEQELEEIISSDELNVKSE 256
C GI F+ + C++L E ++IL+NF++V+ +SEE + +S+++L E++SSDELNV SE
Sbjct: 1 CLGIYRFADTYGCEELAEVALRFILKNFLEVS-KSEEFLELSKEQLLELLSSDELNVPSE 59
Query: 257 ETVWELIIRWIDYDPENRKKHIVSLMKNIRLGLLETEFFRE 297
E V+E +I+W+ +D ENRKKH+ L+ +RL LL E+ +
Sbjct: 60 EEVFEAVIKWVKHDVENRKKHLPELLSAVRLPLLSPEYLLD 100
|
This domain is found associated with pfam00651 and pfam01344. The BACK domain is found juxtaposed to the BTB domain; they are separated by as little as two residues. This family appears to be closely related to the BTB domain (Finn RD, personal observation). Length = 101 |
| >gnl|CDD|197943 smart00875, BACK, BTB And C-terminal Kelch | Back alignment and domain information |
|---|
Score = 111 bits (279), Expect = 3e-29
Identities = 41/102 (40%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Query: 197 CFGILLFSRDHFCKKLEEWTRKYILRNFVDVARESEEIVFISEQELEEIISSDELNVKSE 256
C GI F+ H ++L E ++IL+NF +V+ SEE + + ++L E++SSD+LNV SE
Sbjct: 1 CLGIRRFADAHGLEELAEKALRFILQNFSEVSS-SEEFLELPLEQLLELLSSDDLNVSSE 59
Query: 257 ETVWELIIRWIDYDPENRKKHIVSLMKNIRLGLLETEFFREK 298
E V+E ++RW+ +DPE R++H+ L++++RL LL ++ E
Sbjct: 60 EEVFEAVLRWVKHDPEKRREHLPELLEHVRLPLLSPDYLLEV 101
|
The BACK domain is found juxtaposed to the BTB domain; they are separated by as little as two residues. Length = 101 |
| >gnl|CDD|165153 PHA02790, PHA02790, Kelch-like protein; Provisional | Back alignment and domain information |
|---|
Score = 115 bits (290), Expect = 3e-27
Identities = 118/525 (22%), Positives = 220/525 (41%), Gaps = 82/525 (15%)
Query: 96 TIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIP------GVDASVMTSL 149
TI+ A + ++ IL S YFR H ++K++ + P +D +TS+
Sbjct: 24 TIIEAIGGNIIVNSTILKKLSPYFRT------HLRQKYTKNKDPVTRVCLDLDIHSLTSI 77
Query: 150 IEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLTTPRNCFGILLFSRDHFC 209
+ Y+Y K++I NV +LL A+ + C +FI R C + ++
Sbjct: 78 VIYSYTGKVYIDSHNVVNLLRASILTSVEFIIYTCINFILRDFRKEYCVECYMMGIEYGL 137
Query: 210 KKLEEWTRKYILRNFVDVARESEEIVFISEQELEEIISSDELNVKSEETVWELIIRWIDY 269
L T+ +I ++F+++ E + I ++ I+ SDELNV E+ V + +I+W
Sbjct: 138 SNLLCHTKDFIAKHFLEL--EDDIIDNFDYLSMKLILESDELNVPDEDYVVDFVIKWY-M 194
Query: 270 DPENRKKHIVSLMKNIRLGLLETEFFREKVKHHPYVQSTPECRPIIIETFKFLYDLELIA 329
NR +++ L+KN+ + + + P I K++ D I
Sbjct: 195 KRRNRLGNLLLLIKNV----IRSNYLS----------------PRGINNVKWILDCTKIF 234
Query: 330 QIDGEVPTPEIARPRVPHEILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAY 389
D +PR ++ F+E Y D+ + I +
Sbjct: 235 HCD--------KQPRKSYKY-------------PFIE-YPMNMDQIIDI----------F 262
Query: 390 H--GTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIY 447
H + +G +Y+IGG+ NE +N+ N ++ W I PMN R Y S ++ +Y
Sbjct: 263 HMCTSTHVGEVVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLYASGVPANNKLY 322
Query: 448 AMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNS 507
+GG SVE++ + + W + + R + + ++ IY+ GG + + +
Sbjct: 323 VVGGLPN---PTSVERWFHGDAAWVNMPSLLKPRCNPAVASINNVIYVIGGHSETD--TT 377
Query: 508 CEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQ 567
E P +QW + + + ++++G N E Y + TW+
Sbjct: 378 TEYLLPNHDQWQFGPSTYYPHYKSCALVFGRRLFLVGR--------NAEFYCESSNTWTL 429
Query: 568 VPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEW 612
+ D PR N + ++D+ + IGGF + I +E Y+ +T W
Sbjct: 430 IDDPIYPRDNPELIIVDNKLLLIGGFYRGSYIDTIEVYNNRTYSW 474
|
Length = 480 |
| >gnl|CDD|216043 pfam00651, BTB, BTB/POZ domain | Back alignment and domain information |
|---|
Score = 98.8 bits (247), Expect = 8e-25
Identities = 39/107 (36%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
Query: 83 LNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIPGVD 142
LNE RE LCD T+V + F H+ +L ACS YF+ALFT + + + V
Sbjct: 1 LNELRENGELCDVTLV-VGDKEFHAHKAVLAACSPYFKALFTGNK-----EVEITLEDVS 54
Query: 143 ASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIK 189
+L+E+ Y KL ITE+NV LL D + D C +F+
Sbjct: 55 PEDFEALLEFIYTGKLEITEENVDDLLALADKLQIPALIDKCEEFLI 101
|
The BTB (for BR-C, ttk and bab) or POZ (for Pox virus and Zinc finger) domain is present near the N-terminus of a fraction of zinc finger (pfam00096) proteins and in proteins that contain the pfam01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT. The POZ or BTB domain is also known as BR-C/Ttk or ZiN. Length = 101 |
| >gnl|CDD|222983 PHA03098, PHA03098, kelch-like protein; Provisional | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 4e-23
Identities = 56/197 (28%), Positives = 85/197 (43%), Gaps = 12/197 (6%)
Query: 334 EVPTPEIARPR------VPHEILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPR 387
PE+ PR V + ++ IGG + VE++ +W E+ + PR
Sbjct: 323 WNKVPELIYPRKNPGVTVFNNRIYVIGGIYNSISLNTVESWKPGESKW--REEPPLIFPR 380
Query: 388 AYHGTAVIGYNIYVIGG-FDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVI 446
+ IYVIGG +E + CF+ T W + +P+ H I
Sbjct: 381 YNPCVVNVNNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYGGCAIYHDGKI 440
Query: 447 YAMGGY---NGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHN 503
Y +GG + + N VE YN N+W+ ++ +N R +AS KIY+ GG
Sbjct: 441 YVIGGISYIDNIKVYNIVESYNPVTNKWTELSSLNFPRINASLCIFNNKIYVVGGDKYEY 500
Query: 504 CLNSCEVYDPECNQWTL 520
+N EVYD + N WTL
Sbjct: 501 YINEIEVYDDKTNTWTL 517
|
Length = 534 |
| >gnl|CDD|197585 smart00225, BTB, Broad-Complex, Tramtrack and Bric a brac | Back alignment and domain information |
|---|
Score = 84.3 bits (209), Expect = 1e-19
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Query: 94 DATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIPGVDASVMTSLIEYA 153
D T+V F H+ +L A S YF+ALF++ + +K S + + V +L+ +
Sbjct: 1 DVTLV-VGGKKFHAHKAVLAAHSPYFKALFSSDFKESDK-SEIYLDDVSPEDFRALLNFL 58
Query: 154 YLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLT 192
Y KL + E+NV LL D+ + +LC +F+ +L
Sbjct: 59 YTGKLDLPEENVEELLELADYLQIPGLVELCEEFLLKLL 97
|
Domain in Broad-Complex, Tramtrack and Bric a brac. Also known as POZ (poxvirus and zinc finger) domain. Known to be a protein-protein interaction motif found at the N-termini of several C2H2-type transcription factors as well as Shaw-type potassium channels. Known structure reveals a tightly intertwined dimer formed via interactions between N-terminal strand and helix structures. However in a subset of BTB/POZ domains, these two secondary structures appear to be missing. Be aware SMART predicts BTB/POZ domains without the beta1- and alpha1-secondary structures. Length = 97 |
| >gnl|CDD|128874 smart00612, Kelch, Kelch domain | Back alignment and domain information |
|---|
Score = 69.9 bits (172), Expect = 3e-15
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 539 CIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDD 585
IYV+GGF+G R+ + E Y+P T W+ +P M PRS + VI+
Sbjct: 1 KIYVVGGFDGGQRLKSVEVYDPETNKWTPLPSMPTPRSGHGVAVING 47
|
Length = 47 |
| >gnl|CDD|177844 PLN02193, PLN02193, nitrile-specifier protein | Back alignment and domain information |
|---|
Score = 75.4 bits (185), Expect = 3e-14
Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 20/165 (12%)
Query: 395 IGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMN---FKRCYVSTAVHHDVIYAMGG 451
IG +YV GG D + YN F+ T WK + P+ R + S A + +Y GG
Sbjct: 227 IGSTLYVFGGRDASRQYNGFYSFDTTTNEWKLLTPVEEGPTPRSFHSMAADEENVYVFGG 286
Query: 452 YNGQRRQNSVEKYNYTENQW---SLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSC 508
+ R +++ YN + +W S R A +QGK+++ GFNG C
Sbjct: 287 VSATARLKTLDSYNIVDKKWFHCSTPGDSFSIRGGAGLEVVQGKVWVVYGFNG------C 340
Query: 509 EV-----YDPECNQWTLIEPMRHR---RSGVSCIAYHECIYVIGG 545
EV YDP ++WT +E R RS + A + I + GG
Sbjct: 341 EVDDVHYYDPVQDKWTQVETFGVRPSERSVFASAAVGKHIVIFGG 385
|
Length = 470 |
| >gnl|CDD|201739 pfam01344, Kelch_1, Kelch motif | Back alignment and domain information |
|---|
Score = 63.1 bits (154), Expect = 7e-13
Identities = 22/45 (48%), Positives = 28/45 (62%)
Query: 481 RSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMR 525
RS A L GKIY+ GG++G L+S EVYDPE N W+ + M
Sbjct: 2 RSGAGVVVLGGKIYVIGGYDGGQSLSSVEVYDPETNTWSKLPSMP 46
|
The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that the Drosophila ring canal kelch protein is related to Galactose Oxidase, for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415. Length = 46 |
| >gnl|CDD|177844 PLN02193, PLN02193, nitrile-specifier protein | Back alignment and domain information |
|---|
Score = 70.8 bits (173), Expect = 8e-13
Identities = 63/253 (24%), Positives = 95/253 (37%), Gaps = 63/253 (24%)
Query: 374 RWVKIEQV-DPMGPRAYHGTAVIGYNIYVIGG-FDGNEYYNS-CRCFNAVTKVWKEIAPM 430
+W+K+EQ + G R HG A +G IY GG F N+ + F+ T+ W I+P
Sbjct: 152 KWIKVEQKGEGPGLRCSHGIAQVGNKIYSFGGEFTPNQPIDKHLYVFDLETRTW-SISPA 210
Query: 431 N--------FKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERS 482
VS +Y GG + R+ N ++ T N+W L+ P
Sbjct: 211 TGDVPHLSCLGVRMVSIG---STLYVFGGRDASRQYNGFYSFDTTTNEWKLLTP------ 261
Query: 483 DASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYV 542
+E RS S A E +YV
Sbjct: 262 --------------------------------------VEEGPTPRSFHSMAADEENVYV 283
Query: 543 IGGFNGMSRMCNGEKYNPVTKTW---SQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTI 599
GG + +R+ + YN V K W S D ++ R +EV+ ++ + GFNG +
Sbjct: 284 FGGVSATARLKTLDSYNIVDKKWFHCSTPGDSFSIRGGAGLEVVQGKVWVVYGFNGC-EV 342
Query: 600 YHVECYDEKTDEW 612
V YD D+W
Sbjct: 343 DDVHYYDPVQDKW 355
|
Length = 470 |
| >gnl|CDD|128874 smart00612, Kelch, Kelch domain | Back alignment and domain information |
|---|
Score = 61.0 bits (149), Expect = 3e-12
Identities = 22/47 (46%), Positives = 27/47 (57%)
Query: 492 KIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHE 538
KIY+ GGF+G L S EVYDPE N+WT + M RSG +
Sbjct: 1 KIYVVGGFDGGQRLKSVEVYDPETNKWTPLPSMPTPRSGHGVAVING 47
|
Length = 47 |
| >gnl|CDD|201739 pfam01344, Kelch_1, Kelch motif | Back alignment and domain information |
|---|
Score = 61.1 bits (149), Expect = 3e-12
Identities = 16/46 (34%), Positives = 22/46 (47%)
Query: 433 KRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMN 478
R V IY +GGY+G + +SVE Y+ N WS + M
Sbjct: 1 PRSGAGVVVLGGKIYVIGGYDGGQSLSSVEVYDPETNTWSKLPSMP 46
|
The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that the Drosophila ring canal kelch protein is related to Galactose Oxidase, for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415. Length = 46 |
| >gnl|CDD|201739 pfam01344, Kelch_1, Kelch motif | Back alignment and domain information |
|---|
Score = 60.8 bits (148), Expect = 4e-12
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 527 RRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDM 571
RSG + IYVIGG++G + + E Y+P T TWS++P M
Sbjct: 1 PRSGAGVVVLGGKIYVIGGYDGGQSLSSVEVYDPETNTWSKLPSM 45
|
The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that the Drosophila ring canal kelch protein is related to Galactose Oxidase, for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415. Length = 46 |
| >gnl|CDD|128874 smart00612, Kelch, Kelch domain | Back alignment and domain information |
|---|
Score = 60.3 bits (147), Expect = 7e-12
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 445 VIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQG 491
IY +GG++G +R SVE Y+ N+W+ + M RS + G
Sbjct: 1 KIYVVGGFDGGQRLKSVEVYDPETNKWTPLPSMPTPRSGHGVAVING 47
|
Length = 47 |
| >gnl|CDD|165086 PHA02713, PHA02713, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 67.7 bits (165), Expect = 1e-11
Identities = 109/561 (19%), Positives = 206/561 (36%), Gaps = 73/561 (13%)
Query: 58 IENAIKNKKNFSSIDRAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSD 117
I++ N++ S+I + + ++LCD I + D H+ IL A S
Sbjct: 3 IDDIKHNRRVVSNISNLL------------DDDILCDVIITIGDGEEIKAHKTILAAGSK 50
Query: 118 YFRALFTTSLHDQEKFSLVEIPGVDASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCM 177
YFR LFTT + ++ + V + D + ++++Y Y R HI+ NV +L D+ +
Sbjct: 51 YFRTLFTTPMIIRDLVTRVNLQMFDKDAVKNIVQYLYNR--HISSMNVIDVLKCADYLLI 108
Query: 178 SKAQDLCCDFIKRLTTPRNCFGIL--LFSRDHFCKKLEEWTRKYILRNFVDVARESEEIV 235
C +IK T C + L+ H + ++ ++ ++ N +
Sbjct: 109 DDLVTDCESYIKDYTNHDTCIYMYHRLYEMSHI--PIVKYIKRMLMSNIPTLITTDAFKK 166
Query: 236 FISEQELEEIISSDELNVKSEETVWELIIRWIDYDPENRKK--------HIVSLMKNIRL 287
+ E + I ++D + + E ++++W++Y+ ++ I +L K RL
Sbjct: 167 TVFEILFDIISTNDNVYLYREGYKVTILLKWLEYNYITEEQLLCILSCIDIQNLDKKSRL 226
Query: 288 GLLETEFFREKVKHHPYVQSTPECRPIIIETFKFLY--------------------DLEL 327
L + ++ + R II + + +
Sbjct: 227 LLYSNKTINMYPSCIQFLLDNKQNRNIIPRQLCLVCHDTKYNVCNPCILVYNINTMEYSV 286
Query: 328 IAQIDGEVPTPEIARPRVPHEILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPR 387
I+ I + A V +EI+ A GG++ +P+ + Y + + +E + R
Sbjct: 287 ISTIPNHIIN--YASAIVDNEIIIA-GGYNFNNPS-LNKVYKINIENKIHVELPPMIKNR 342
Query: 388 AYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIY 447
AVI IY IGG +G + C+ WK + M V IY
Sbjct: 343 CRFSLAVIDDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSSYGMCVLDQYIY 402
Query: 448 AMGG------YNGQRRQNSVE------------KYNYTENQWSLIAPMNVERSDASATTL 489
+GG Y NS++ +Y+ N W + +
Sbjct: 403 IIGGRTEHIDYTSVHHMNSIDMEEDTHSSNKVIRYDTVNNIWETLPNFWTGTIRPGVVSH 462
Query: 490 QGKIYITGGFNGHNCLNSCEV-YDPEC-NQWTLIEPMRHRRSGVSCIAYHECIYVIGGFN 547
+ IY+ + +C Y+ N W LI R S + I + I ++ +
Sbjct: 463 KDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTILHDNTIMMLHCYE 522
Query: 548 GMSRMCNGEKYNPVTKTWSQV 568
S M + +N T W+ +
Sbjct: 523 --SYMLQ-DTFNVYTYEWNHI 540
|
Length = 557 |
| >gnl|CDD|222983 PHA03098, PHA03098, kelch-like protein; Provisional | Back alignment and domain information |
|---|
Score = 67.1 bits (164), Expect = 2e-11
Identities = 38/174 (21%), Positives = 66/174 (37%), Gaps = 6/174 (3%)
Query: 463 KYNYTENQWSLIAPMNVERSDAS--ATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTL 520
K + + +I + ++T IYI N Y P T+
Sbjct: 221 KIVFNKRCIKIIYSKKYNLNKILPRSSTFGSIIYIHIT-MSIFTYNYITNYSPLSEINTI 279
Query: 521 IEPMRHRRSGVSCIAYHECIYVIGGFNG-MSRMCNGEKYNPVTKTWSQVPDMYNPRSNFA 579
I+ H + + IY IGG N + + Y+ TK+W++VP++ PR N
Sbjct: 280 ID--IHYVYCFGSVVLNNVIYFIGGMNKNNLSVNSVVSYDTKTKSWNKVPELIYPRKNPG 337
Query: 580 IEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACVIMGL 633
+ V ++ I+ IGG ++ VE + +W E + R + L
Sbjct: 338 VTVFNNRIYVIGGIYNSISLNTVESWKPGESKWREEPPLIFPRYNPCVVNVNNL 391
|
Length = 534 |
| >gnl|CDD|128874 smart00612, Kelch, Kelch domain | Back alignment and domain information |
|---|
Score = 58.7 bits (143), Expect = 2e-11
Identities = 15/46 (32%), Positives = 21/46 (45%)
Query: 399 IYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHD 444
IYV+GGFDG + S ++ T W + M R AV +
Sbjct: 2 IYVVGGFDGGQRLKSVEVYDPETNKWTPLPSMPTPRSGHGVAVING 47
|
Length = 47 |
| >gnl|CDD|201739 pfam01344, Kelch_1, Kelch motif | Back alignment and domain information |
|---|
Score = 58.1 bits (141), Expect = 4e-11
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 386 PRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMN 431
PR+ G V+G IYVIGG+DG + +S ++ T W ++ M
Sbjct: 1 PRSGAGVVVLGGKIYVIGGYDGGQSLSSVEVYDPETNTWSKLPSMP 46
|
The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that the Drosophila ring canal kelch protein is related to Galactose Oxidase, for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415. Length = 46 |
| >gnl|CDD|177814 PLN02153, PLN02153, epithiospecifier protein | Back alignment and domain information |
|---|
Score = 64.6 bits (157), Expect = 5e-11
Identities = 65/255 (25%), Positives = 108/255 (42%), Gaps = 41/255 (16%)
Query: 375 WVKIEQ---VDPMGPRAYHGTAVIGYNIYVIGG-FDGNEYYNS-CRCFNAVTKVWKEIAP 429
W+K+EQ P GPR HG AV+G +Y GG NE+ + F+ T W IAP
Sbjct: 9 WIKVEQKGGKGP-GPRCSHGIAVVGDKLYSFGGELKPNEHIDKDLYVFDFNTHTW-SIAP 66
Query: 430 MNFKRCYVST------AVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVE--- 480
N +S AV +Y GG + +R + Y+ +N+W+ + ++ E
Sbjct: 67 ANGDVPRISCLGVRMVAVGTK-LYIFGGRDEKREFSDFYSYDTVKNEWTFLTKLDEEGGP 125
Query: 481 --RSDASATTLQGKIYITGGFNGHNCLN------SCEVYDPECNQWT-LIEPMRH--RRS 529
R+ S + + +Y+ GG + + + E Y+ +W L +P + +R
Sbjct: 126 EARTFHSMASDENHVYVFGGVSKGGLMKTPERFRTIEAYNIADGKWVQLPDPGENFEKRG 185
Query: 530 GVSCIAYHECIYVIGGFNGMSRMCNGEK---------YNPVTKTWSQVPDM---YNPRSN 577
G I+V+ GF S + G+ ++P + W++V + RS
Sbjct: 186 GAGFAVVQGKIWVVYGF-ATSILPGGKSDYESNAVQFFDPASGKWTEVETTGAKPSARSV 244
Query: 578 FAIEVIDDMIFAIGG 592
FA V+ I GG
Sbjct: 245 FAHAVVGKYIIIFGG 259
|
Length = 341 |
| >gnl|CDD|201739 pfam01344, Kelch_1, Kelch motif | Back alignment and domain information |
|---|
Score = 57.3 bits (139), Expect = 7e-11
Identities = 16/46 (34%), Positives = 26/46 (56%)
Query: 574 PRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMN 619
PRS + V+ I+ IGG++G ++ VE YD +T+ W + M
Sbjct: 1 PRSGAGVVVLGGKIYVIGGYDGGQSLSSVEVYDPETNTWSKLPSMP 46
|
The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that the Drosophila ring canal kelch protein is related to Galactose Oxidase, for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415. Length = 46 |
| >gnl|CDD|128874 smart00612, Kelch, Kelch domain | Back alignment and domain information |
|---|
Score = 56.4 bits (137), Expect = 1e-10
Identities = 17/46 (36%), Positives = 24/46 (52%)
Query: 587 IFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACVIMG 632
I+ +GGF+G + VE YD +T++W M RS VI G
Sbjct: 2 IYVVGGFDGGQRLKSVEVYDPETNKWTPLPSMPTPRSGHGVAVING 47
|
Length = 47 |
| >gnl|CDD|165086 PHA02713, PHA02713, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 58.9 bits (142), Expect = 5e-09
Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 2/131 (1%)
Query: 502 HNCLNSC-EVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNG-EKYN 559
+N N C VY+ ++++I + + + I + GG+N + N K N
Sbjct: 267 YNVCNPCILVYNINTMEYSVISTIPNHIINYASAIVDNEIIIAGGYNFNNPSLNKVYKIN 326
Query: 560 PVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMN 619
K ++P M R F++ VIDD I+AIGG NG +ECY D+W DM
Sbjct: 327 IENKIHVELPPMIKNRCRFSLAVIDDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMP 386
Query: 620 IYRSALSACVI 630
I S+ CV+
Sbjct: 387 IALSSYGMCVL 397
|
Length = 557 |
| >gnl|CDD|211835 TIGR03548, mutarot_permut, cyclically-permuted mutarotase family protein | Back alignment and domain information |
|---|
Score = 55.5 bits (134), Expect = 3e-08
Identities = 47/184 (25%), Positives = 81/184 (44%), Gaps = 14/184 (7%)
Query: 423 VWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSL----IAPMN 478
W + + + Y ++ + IY +GG N +SV + E++ +L + +
Sbjct: 52 KWVKAGQLPYAAAYGASISTENGIYYIGGSNSSESFSSVYRITLDESKEALIIETLPSLP 111
Query: 479 VERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIE--PMRHRRSGVSCIAY 536
+ SAT GK+Y+ GG N ++ E +W + P R V C+
Sbjct: 112 FAMDNGSATYKDGKLYVGGGNANGKPSNKFYCFNLETQEWEELPDFPGAPRVQPV-CVKL 170
Query: 537 HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMY---NPRS---NFAIEVIDDMIFAI 590
+YV GG + ++ +G KY+P T TW +V D P S +I + + ++ I
Sbjct: 171 QNELYVFGGGDNIAYT-DGYKYSPKTGTWEKVADPLSDGEPISLLGAASIAINESLLLCI 229
Query: 591 GGFN 594
GGFN
Sbjct: 230 GGFN 233
|
Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat. Length = 323 |
| >gnl|CDD|206134 pfam13964, Kelch_6, Kelch motif | Back alignment and domain information |
|---|
Score = 48.6 bits (116), Expect = 9e-08
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 386 PRAYHGTAVIGYNIYVIGGF-DGNEYYNSCRCFNAVTKVWKEIAPMNFKR 434
PR H +G IYV GG+ +G++ N ++ T W+++ P+ R
Sbjct: 1 PRTGHSAVSVGGKIYVFGGYSNGSKASNKVLVYDPETGSWEKLPPLPTPR 50
|
Length = 50 |
| >gnl|CDD|206134 pfam13964, Kelch_6, Kelch motif | Back alignment and domain information |
|---|
Score = 48.6 bits (116), Expect = 1e-07
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 528 RSGVSCIAYHECIYVIGGFNGMSRMCN-GEKYNPVTKTWSQVPDMYNPR 575
R+G S ++ IYV GG++ S+ N Y+P T +W ++P + PR
Sbjct: 2 RTGHSAVSVGGKIYVFGGYSNGSKASNKVLVYDPETGSWEKLPPLPTPR 50
|
Length = 50 |
| >gnl|CDD|165086 PHA02713, PHA02713, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 51.9 bits (124), Expect = 9e-07
Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 8/154 (5%)
Query: 464 YNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHN-CLNSCEVYDPECNQWTLIE 522
YN ++S+I+ + + ++ + +I I GG+N +N LN +VY +E
Sbjct: 277 YNINTMEYSVISTIPNHIINYASAIVDNEIIIAGGYNFNNPSLN--KVYKINIENKIHVE 334
Query: 523 --PMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAI 580
PM R S + IY IGG NG + E Y W +PDM S++ +
Sbjct: 335 LPPMIKNRCRFSLAVIDDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSSYGM 394
Query: 581 EVIDDMIFAIGG---FNGVTTIYHVECYDEKTDE 611
V+D I+ IGG T+++H+ D + D
Sbjct: 395 CVLDQYIYIIGGRTEHIDYTSVHHMNSIDMEEDT 428
|
Length = 557 |
| >gnl|CDD|206134 pfam13964, Kelch_6, Kelch motif | Back alignment and domain information |
|---|
Score = 45.9 bits (109), Expect = 9e-07
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 481 RSDASATTLQGKIYITGGF-NGHNCLNSCEVYDPECNQWTLIEPMRHRR 528
R+ SA ++ GKIY+ GG+ NG N VYDPE W + P+ R
Sbjct: 2 RTGHSAVSVGGKIYVFGGYSNGSKASNKVLVYDPETGSWEKLPPLPTPR 50
|
Length = 50 |
| >gnl|CDD|128874 smart00612, Kelch, Kelch domain | Back alignment and domain information |
|---|
Score = 42.5 bits (101), Expect = 1e-05
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 350 LFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPM-GPRAYHGTAVIG 396
++ +GG+ GG VE YD ++W + M PR+ HG AVI
Sbjct: 2 IYVVGGFDGGQRLKSVEVYDPETNKW---TPLPSMPTPRSGHGVAVIN 46
|
Length = 47 |
| >gnl|CDD|206134 pfam13964, Kelch_6, Kelch motif | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 2e-05
Identities = 15/49 (30%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Query: 434 RCYVSTAVHHDVIYAMGGY-NGQRRQNSVEKYNYTENQWSLIAPMNVER 481
R S IY GGY NG + N V Y+ W + P+ R
Sbjct: 2 RTGHSAVSVGGKIYVFGGYSNGSKASNKVLVYDPETGSWEKLPPLPTPR 50
|
Length = 50 |
| >gnl|CDD|222113 pfam13415, Kelch_3, Galactose oxidase, central domain | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 5e-05
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 491 GKIYITGGFNGHN-CLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY 536
GKIY+ GG LN VYD + N W + + R+G +
Sbjct: 2 GKIYVFGGLGDGGTRLNDLWVYDLDTNTWEKLGDLPGPRAGHAATVI 48
|
Length = 48 |
| >gnl|CDD|205596 pfam13418, Kelch_4, Galactose oxidase, central domain | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 7e-05
Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 481 RSDASATTLQ-GKIYITGGFNG-HNCLNSCEVYDPECNQWTLIEPM 524
R+ ++T++ G++Y+ GG N + L+ V+D N WT + +
Sbjct: 2 RAYHTSTSIGDGRLYLFGGENEDGSVLSDVWVFDLSTNTWTRLPSL 47
|
Length = 49 |
| >gnl|CDD|205596 pfam13418, Kelch_4, Galactose oxidase, central domain | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 1e-04
Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 386 PRAYHGTAVIGYN-IYVIGGFDGN-EYYNSCRCFNAVTKVWKEIAPM 430
PRAYH + IG +Y+ GG + + + F+ T W + +
Sbjct: 1 PRAYHTSTSIGDGRLYLFGGENEDGSVLSDVWVFDLSTNTWTRLPSL 47
|
Length = 49 |
| >gnl|CDD|222113 pfam13415, Kelch_3, Galactose oxidase, central domain | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 2e-04
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 540 IYVIGGFNGMSRMCNG-EKYNPVTKTWSQVPDMYNPRSNFAI 580
IYV GG N Y+ T TW ++ D+ PR+ A
Sbjct: 4 IYVFGGLGDGGTRLNDLWVYDLDTNTWEKLGDLPGPRAGHAA 45
|
Length = 48 |
| >gnl|CDD|201739 pfam01344, Kelch_1, Kelch motif | Back alignment and domain information |
|---|
Score = 38.4 bits (90), Expect = 3e-04
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 345 VPHEILFAIGGWSGGSPTDFVETYDTRADRWVKI 378
V ++ IGG+ GG VE YD + W K+
Sbjct: 9 VLGGKIYVIGGYDGGQSLSSVEVYDPETNTWSKL 42
|
The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that the Drosophila ring canal kelch protein is related to Galactose Oxidase, for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415. Length = 46 |
| >gnl|CDD|237617 PRK14131, PRK14131, N-acetylneuraminic acid mutarotase; Provisional | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 3e-04
Identities = 36/127 (28%), Positives = 52/127 (40%), Gaps = 22/127 (17%)
Query: 391 GT-AVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNF---KRCYVSTAVHHDVI 446
GT A+ +YV G G +Y NA +K W +IA F R A +
Sbjct: 32 GTGAIDNNTVYVGLGSAGTSWYK--LDLNAPSKGWTKIA--AFPGGPREQAVAAFIDGKL 87
Query: 447 YAMGGYNGQ-------RRQNSVEKYNYTENQWS---LIAPMNVERSDASATTLQG-KIYI 495
Y GG G+ + + V KY+ N W +P+ + + A +L K YI
Sbjct: 88 YVFGG-IGKTNSEGSPQVFDDVYKYDPKTNSWQKLDTRSPVGL--AGHVAVSLHNGKAYI 144
Query: 496 TGGFNGH 502
TGG N +
Sbjct: 145 TGGVNKN 151
|
Length = 376 |
| >gnl|CDD|237617 PRK14131, PRK14131, N-acetylneuraminic acid mutarotase; Provisional | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 3e-04
Identities = 25/93 (26%), Positives = 35/93 (37%), Gaps = 11/93 (11%)
Query: 465 NYTENQWSLIAPM-NVERSDASATTLQGKIYITGGFNGHN------CLNSCEVYDPECNQ 517
N W+ IA R A A + GK+Y+ GG N + YDP+ N
Sbjct: 58 NAPSKGWTKIAAFPGGPREQAVAAFIDGKLYVFGGIGKTNSEGSPQVFDDVYKYDPKTNS 117
Query: 518 WTLIEPMRHRRS--GVSCIAYHEC-IYVIGGFN 547
W + R G ++ H Y+ GG N
Sbjct: 118 WQKL-DTRSPVGLAGHVAVSLHNGKAYITGGVN 149
|
Length = 376 |
| >gnl|CDD|234253 TIGR03547, muta_rot_YjhT, mutatrotase, YjhT family | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 3e-04
Identities = 36/126 (28%), Positives = 54/126 (42%), Gaps = 18/126 (14%)
Query: 390 HGT-AVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNF---KRCYVSTAVHHDV 445
+GT A+IG +YV G G +Y +K W++IA +F R A
Sbjct: 10 NGTGAIIGDKVYVGLGSAGTSWYK--LDLKKPSKGWQKIA--DFPGGPRNQAVAAAIDGK 65
Query: 446 IYAMGGYNGQ-------RRQNSVEKYNYTENQWS-LIAPMNVERSDASATTLQ-GKIYIT 496
+Y GG G+ + + V +Y+ +N W L V AS +L G+ Y T
Sbjct: 66 LYVFGG-IGKANSEGSPQVFDDVYRYDPKKNSWQKLDTRSPVGLLGASGFSLHNGQAYFT 124
Query: 497 GGFNGH 502
GG N +
Sbjct: 125 GGVNKN 130
|
Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein. Length = 346 |
| >gnl|CDD|234253 TIGR03547, muta_rot_YjhT, mutatrotase, YjhT family | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 5e-04
Identities = 26/97 (26%), Positives = 35/97 (36%), Gaps = 19/97 (19%)
Query: 465 NYTENQWSLIAPM-NVERSDASATTLQGKIYITGGFNGHN-------CLNSCEVYDPECN 516
W IA R+ A A + GK+Y+ GG G + YDP+ N
Sbjct: 37 KKPSKGWQKIADFPGGPRNQAVAAAIDGKLYVFGG-IGKANSEGSPQVFDDVYRYDPKKN 95
Query: 517 QWTLIEPMRHRRS-----GVSCIAYHEC-IYVIGGFN 547
W ++ RS G S + H Y GG N
Sbjct: 96 SWQKLD----TRSPVGLLGASGFSLHNGQAYFTGGVN 128
|
Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein. Length = 346 |
| >gnl|CDD|206134 pfam13964, Kelch_6, Kelch motif | Back alignment and domain information |
|---|
Score = 37.8 bits (88), Expect = 6e-04
Identities = 11/50 (22%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 574 PRSNFAIEVIDDMIFAIGGFNGVTTIYH-VECYDEKTDEWYEATDMNIYR 622
PR+ + + I+ GG++ + + V YD +T W + + R
Sbjct: 1 PRTGHSAVSVGGKIYVFGGYSNGSKASNKVLVYDPETGSWEKLPPLPTPR 50
|
Length = 50 |
| >gnl|CDD|222113 pfam13415, Kelch_3, Galactose oxidase, central domain | Back alignment and domain information |
|---|
Score = 37.7 bits (88), Expect = 6e-04
Identities = 10/46 (21%), Positives = 17/46 (36%), Gaps = 1/46 (2%)
Query: 398 NIYVIGGFDG-NEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH 442
IYV GG N ++ T W+++ + R + V
Sbjct: 3 KIYVFGGLGDGGTRLNDLWVYDLDTNTWEKLGDLPGPRAGHAATVI 48
|
Length = 48 |
| >gnl|CDD|225597 COG3055, COG3055, Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 0.003
Identities = 23/79 (29%), Positives = 30/79 (37%), Gaps = 15/79 (18%)
Query: 480 ERSDASATTLQGKIYITGGFNGHN-----CLNSCEVYDPECNQWTLIEPMRHRRS----- 529
R+ A A + GK+Y+ GG+ N YDP N W RS
Sbjct: 82 ARNQAVAAVIGGKLYVFGGYGKSVSSSPQVFNDAYRYDPSTNSWH----KLDTRSPTGLV 137
Query: 530 GVSCIAYHEC-IYVIGGFN 547
G S + + IY GG N
Sbjct: 138 GASTFSLNGTKIYFFGGVN 156
|
Length = 381 |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 712 | ||||
| 2vpj_A | 301 | Crystal Structure Of The Kelch Domain Of Human Klhl | 4e-51 | ||
| 2vpj_A | 301 | Crystal Structure Of The Kelch Domain Of Human Klhl | 1e-13 | ||
| 3vng_A | 309 | Crystal Structure Of Keap1 In Complex With Syntheti | 3e-45 | ||
| 1u6d_X | 308 | Crystal Structure Of The Kelch Domain Of Human Keap | 1e-44 | ||
| 2dyh_A | 318 | Crystal Structure Of The Keap1 Protein In Complexed | 1e-44 | ||
| 1x2j_A | 316 | Structural Basis For The Defects Of Human Lung Canc | 1e-44 | ||
| 1zgk_A | 308 | 1.35 Angstrom Structure Of The Kelch Domain Of Keap | 3e-40 | ||
| 2xn4_A | 302 | Crystal Structure Of The Kelch Domain Of Human Klhl | 7e-37 | ||
| 2xn4_A | 302 | Crystal Structure Of The Kelch Domain Of Human Klhl | 3e-36 | ||
| 3hve_A | 256 | Structures Of Spop-Substrate Complexes: Insights In | 2e-21 | ||
| 3ii7_A | 306 | Crystal Structure Of The Kelch Domain Of Human Klhl | 5e-19 | ||
| 3ii7_A | 306 | Crystal Structure Of The Kelch Domain Of Human Klhl | 3e-18 | ||
| 4ap2_A | 297 | Crystal Structure Of The Human Klhl11-cul3 Complex | 2e-16 | ||
| 4asc_A | 315 | Crystal Structure Of The Kelch Domain Of Human Kbtb | 3e-16 | ||
| 4asc_A | 315 | Crystal Structure Of The Kelch Domain Of Human Kbtb | 2e-11 | ||
| 3i3n_A | 279 | Crystal Structure Of The Btb-Back Domains Of Human | 8e-16 | ||
| 2woz_A | 318 | The Novel Beta-Propeller Of The Btb-Kelch Protein K | 1e-15 | ||
| 2woz_A | 318 | The Novel Beta-Propeller Of The Btb-Kelch Protein K | 6e-12 | ||
| 2nn2_A | 133 | Crystal Structure Of The Btb Domain From The LrfZBT | 8e-15 | ||
| 2if5_A | 120 | Structure Of The Poz Domain Of Human Lrf, A Master | 3e-14 | ||
| 3hve_B | 256 | Structures Of Spop-Substrate Complexes: Insights In | 5e-12 | ||
| 3m52_A | 117 | Crystal Structure Of The Btb Domain From The Miz-1Z | 3e-10 | ||
| 2q81_A | 119 | Crystal Structure Of The Miz-1 BtbPOZ DOMAIN Length | 3e-10 | ||
| 2z8h_A | 138 | Structure Of Mouse Bach1 Btb Domain Length = 138 | 5e-10 | ||
| 2ihc_A | 124 | Crystal Structure Of The Bric-A-Brac (Btb) Domain O | 3e-09 | ||
| 2ppi_A | 144 | Structure Of The Btb (Tramtrack And Bric A Brac) Do | 4e-09 | ||
| 3ohu_A | 125 | Crystal Structure Of The Human Bach2 Poz Domain, Fo | 1e-08 | ||
| 1r28_A | 127 | Crystal Structure Of The B-Cell Lymphoma 6 (Bcl6) B | 2e-07 | ||
| 3m8v_A | 124 | Crystal Structure Of The Btb Domain From KaisoZBTB3 | 2e-07 | ||
| 3fkc_A | 116 | Crystal Structure Of Human Zinc Finger And Btb Doma | 4e-07 | ||
| 3e4u_A | 130 | Crystal Structure Of The Wild-Type Human Bcl6 BtbPO | 1e-06 | ||
| 2vpk_A | 116 | Crystal Structure Of The Btb Domain Of Human Myoneu | 2e-06 | ||
| 3b84_A | 119 | Crystal Structure Of The Human Btb Domain Of The Kr | 2e-06 | ||
| 3ga1_A | 129 | Crystal Structure Of The Human Nac1 Poz Domain Leng | 2e-05 | ||
| 2yy9_A | 135 | Crystal Structure Of Btb Domain From Mouse Hkr3 Len | 3e-05 |
| >pdb|2VPJ|A Chain A, Crystal Structure Of The Kelch Domain Of Human Klhl12 Length = 301 | Back alignment and structure |
|
| >pdb|2VPJ|A Chain A, Crystal Structure Of The Kelch Domain Of Human Klhl12 Length = 301 | Back alignment and structure |
|
| >pdb|3VNG|A Chain A, Crystal Structure Of Keap1 In Complex With Synthetic Small Molecular Based On A Co-crystallization Length = 309 | Back alignment and structure |
|
| >pdb|1U6D|X Chain X, Crystal Structure Of The Kelch Domain Of Human Keap1 Length = 308 | Back alignment and structure |
|
| >pdb|2DYH|A Chain A, Crystal Structure Of The Keap1 Protein In Complexed With The N-Terminal Region Of The Nrf2 Transcription Factor Length = 318 | Back alignment and structure |
|
| >pdb|1X2J|A Chain A, Structural Basis For The Defects Of Human Lung Cancer Somatic Mutations In The Repression Activity Of Keap1 On Nrf2 Length = 316 | Back alignment and structure |
|
| >pdb|1ZGK|A Chain A, 1.35 Angstrom Structure Of The Kelch Domain Of Keap1 Length = 308 | Back alignment and structure |
|
| >pdb|2XN4|A Chain A, Crystal Structure Of The Kelch Domain Of Human Klhl2 (mayven) Length = 302 | Back alignment and structure |
|
| >pdb|2XN4|A Chain A, Crystal Structure Of The Kelch Domain Of Human Klhl2 (mayven) Length = 302 | Back alignment and structure |
|
| >pdb|3HVE|A Chain A, Structures Of Spop-Substrate Complexes: Insights Into Molecular Architectures Of Btb-Cul3 Ubiquitin Ligases: Gigaxoninbtb3-Box Length = 256 | Back alignment and structure |
|
| >pdb|3II7|A Chain A, Crystal Structure Of The Kelch Domain Of Human Klhl7 Length = 306 | Back alignment and structure |
|
| >pdb|3II7|A Chain A, Crystal Structure Of The Kelch Domain Of Human Klhl7 Length = 306 | Back alignment and structure |
|
| >pdb|4AP2|A Chain A, Crystal Structure Of The Human Klhl11-cul3 Complex At 2.8a Resolution Length = 297 | Back alignment and structure |
|
| >pdb|4ASC|A Chain A, Crystal Structure Of The Kelch Domain Of Human Kbtbd5 Length = 315 | Back alignment and structure |
|
| >pdb|4ASC|A Chain A, Crystal Structure Of The Kelch Domain Of Human Kbtbd5 Length = 315 | Back alignment and structure |
|
| >pdb|3I3N|A Chain A, Crystal Structure Of The Btb-Back Domains Of Human Klhl11 Length = 279 | Back alignment and structure |
|
| >pdb|2WOZ|A Chain A, The Novel Beta-Propeller Of The Btb-Kelch Protein Krp1 Provides The Binding Site For Lasp-1 That Is Necessary For Pseudopodia Extension Length = 318 | Back alignment and structure |
|
| >pdb|2WOZ|A Chain A, The Novel Beta-Propeller Of The Btb-Kelch Protein Krp1 Provides The Binding Site For Lasp-1 That Is Necessary For Pseudopodia Extension Length = 318 | Back alignment and structure |
|
| >pdb|2NN2|A Chain A, Crystal Structure Of The Btb Domain From The LrfZBTB7 Transcriptional Regulator Length = 133 | Back alignment and structure |
|
| >pdb|2IF5|A Chain A, Structure Of The Poz Domain Of Human Lrf, A Master Regulator Of Oncogenesis Length = 120 | Back alignment and structure |
|
| >pdb|3HVE|B Chain B, Structures Of Spop-Substrate Complexes: Insights Into Molecular Architectures Of Btb-Cul3 Ubiquitin Ligases: Gigaxoninbtb3-Box Length = 256 | Back alignment and structure |
|
| >pdb|3M52|A Chain A, Crystal Structure Of The Btb Domain From The Miz-1ZBTB17 Transcription Regulator Length = 117 | Back alignment and structure |
|
| >pdb|2Q81|A Chain A, Crystal Structure Of The Miz-1 BtbPOZ DOMAIN Length = 119 | Back alignment and structure |
|
| >pdb|2Z8H|A Chain A, Structure Of Mouse Bach1 Btb Domain Length = 138 | Back alignment and structure |
|
| >pdb|2IHC|A Chain A, Crystal Structure Of The Bric-A-Brac (Btb) Domain Of Human Bach1 Length = 124 | Back alignment and structure |
|
| >pdb|2PPI|A Chain A, Structure Of The Btb (Tramtrack And Bric A Brac) Domain Of Human Gigaxonin Length = 144 | Back alignment and structure |
|
| >pdb|3OHU|A Chain A, Crystal Structure Of The Human Bach2 Poz Domain, Form I Length = 125 | Back alignment and structure |
|
| >pdb|1R28|A Chain A, Crystal Structure Of The B-Cell Lymphoma 6 (Bcl6) Btb Domain To 2.2 Angstrom Length = 127 | Back alignment and structure |
|
| >pdb|3M8V|A Chain A, Crystal Structure Of The Btb Domain From KaisoZBTB33, FORM II Length = 124 | Back alignment and structure |
|
| >pdb|3FKC|A Chain A, Crystal Structure Of Human Zinc Finger And Btb Domain Containing 33 Length = 116 | Back alignment and structure |
|
| >pdb|3E4U|A Chain A, Crystal Structure Of The Wild-Type Human Bcl6 BtbPOZ DOMAIN Length = 130 | Back alignment and structure |
|
| >pdb|2VPK|A Chain A, Crystal Structure Of The Btb Domain Of Human Myoneurin Length = 116 | Back alignment and structure |
|
| >pdb|3B84|A Chain A, Crystal Structure Of The Human Btb Domain Of The Krueppel Related Zinc Finger Protein 3 (Hkr3) Length = 119 | Back alignment and structure |
|
| >pdb|3GA1|A Chain A, Crystal Structure Of The Human Nac1 Poz Domain Length = 129 | Back alignment and structure |
|
| >pdb|2YY9|A Chain A, Crystal Structure Of Btb Domain From Mouse Hkr3 Length = 135 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Length = 301 | Back alignment and structure |
|---|
Score = 377 bits (969), Expect = e-126
Identities = 104/297 (35%), Positives = 150/297 (50%), Gaps = 9/297 (3%)
Query: 341 ARPRV-PHEILFAIGGW-SGGSPTDFVETYDTRADRWVKIEQVDPM-GPRAYHGTAVIGY 397
R R+ +E+L +GG+ S SP D VE YD + W + + R Y + +
Sbjct: 7 TRARLGANEVLLVVGGFGSQQSPIDVVEKYDPKTQEW---SFLPSITRKRRYVASVSLHD 63
Query: 398 NIYVIGGFDGNEYYNSCRCFNAVTK---VWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNG 454
IYVIGG+DG +S C + VW +APMN +R D+IY GG++G
Sbjct: 64 RIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDG 123
Query: 455 QRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPE 514
RR S+E+Y+ +QWS++ M R A G IY GG++G N LNS E YDP
Sbjct: 124 SRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPH 183
Query: 515 CNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNP 574
WT + PM +RSG ++ IYV+GGF+G + + + E YN T +W+ V M P
Sbjct: 184 TGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTP 243
Query: 575 RSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACVIM 631
R V+ ++AI G++G + + +ECYD D W T M R CV+
Sbjct: 244 RCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVTSMGTQRCDAGVCVLR 300
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Length = 301 | Back alignment and structure |
|---|
Score = 291 bits (746), Expect = 3e-93
Identities = 87/252 (34%), Positives = 136/252 (53%), Gaps = 5/252 (1%)
Query: 386 PRAYHGTAVIGYNIYVIGGFDGNE-YYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHD 444
PR + V+GGF + + ++ T+ W + + KR YV++ HD
Sbjct: 5 PRTRARLGANEV-LLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHD 63
Query: 445 VIYAMGGYNGQRRQNSVEKYNYTENQ---WSLIAPMNVERSDASATTLQGKIYITGGFNG 501
IY +GGY+G+ R +SVE +YT ++ W +APMNV R A ATTL IY++GGF+G
Sbjct: 64 RIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDG 123
Query: 502 HNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPV 561
S E YDP +QW+++ M+ R G + IY +GG++G++ + + EKY+P
Sbjct: 124 SRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPH 183
Query: 562 TKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIY 621
T W+ V M RS + +++D I+ +GGF+G + VE Y+ +TD W T M
Sbjct: 184 TGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTP 243
Query: 622 RSALSACVIMGL 633
R + A V+ G
Sbjct: 244 RCYVGATVLRGR 255
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Length = 301 | Back alignment and structure |
|---|
Score = 283 bits (727), Expect = 2e-90
Identities = 77/237 (32%), Positives = 110/237 (46%), Gaps = 1/237 (0%)
Query: 350 LFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMG-PRAYHGTAVIGYNIYVIGGFDGN 408
++ IGG+ G S VE D AD V PM R G +G IYV GGFDG+
Sbjct: 65 IYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGS 124
Query: 409 EYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTE 468
+ S ++ W + M R V VIY +GGY+G NSVEKY+
Sbjct: 125 RRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHT 184
Query: 469 NQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRR 528
W+ + PM +RS A L IY+ GGF+G L+S E Y+ + WT + M R
Sbjct: 185 GHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPR 244
Query: 529 SGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDD 585
V +Y I G++G S + + E Y+P+ +W V M R + + V+ +
Sbjct: 245 CYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVTSMGTQRCDAGVCVLRE 301
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Length = 301 | Back alignment and structure |
|---|
Score = 221 bits (566), Expect = 7e-67
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 5/207 (2%)
Query: 430 MNFKRCYVSTAVHHDVIYAMGGYNGQRR-QNSVEKYNYTENQWSLIAPMNVERSDASATT 488
M R + +V+ +GG+ Q+ + VEKY+ +WS + + +R ++ +
Sbjct: 2 MQGPRTRARLGAN-EVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVS 60
Query: 489 LQGKIYITGGFNGHNCLNSCEVYDPECNQ---WTLIEPMRHRRSGVSCIAYHECIYVIGG 545
L +IY+ GG++G + L+S E D ++ W + PM RR + IYV GG
Sbjct: 61 LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGG 120
Query: 546 FNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECY 605
F+G R + E+Y+P WS + DM R + V +I+ +GG++G+ + VE Y
Sbjct: 121 FDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKY 180
Query: 606 DEKTDEWYEATDMNIYRSALSACVIMG 632
D T W T M RS ++
Sbjct: 181 DPHTGHWTNVTPMATKRSGAGVALLND 207
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Length = 302 | Back alignment and structure |
|---|
Score = 370 bits (953), Expect = e-124
Identities = 90/299 (30%), Positives = 146/299 (48%), Gaps = 11/299 (3%)
Query: 342 RPRVP---HEILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPM-GPRAYHGTAVIGY 397
R R P +++ +GG VE YD + +RW QV + R G +
Sbjct: 7 RLRTPMNLPKLMVVVGGQ-APKAIRSVECYDFKEERW---HQVAELPSRRCRAGMVYMAG 62
Query: 398 NIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRR 457
++ +GGF+G+ + ++ V W +A M +R + AV + ++YA+GG++G
Sbjct: 63 LVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTG 122
Query: 458 QNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNG--HNCLNSCEVYDPEC 515
+SVE YN N+W +APMN RS + G +Y GG++ CL++ E Y+
Sbjct: 123 LSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATT 182
Query: 516 NQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPR 575
N+WT I M RRSG + +Y +GG +G + E Y+P T W QV DM R
Sbjct: 183 NEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCR 242
Query: 576 SNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEW-YEATDMNIYRSALSACVIMGL 633
N + ++ +++ +GG +G + VE Y+ TD+W ++ M+ RS VI
Sbjct: 243 RNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVSSCMSTGRSYAGVTVIDKR 301
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Length = 302 | Back alignment and structure |
|---|
Score = 294 bits (756), Expect = 9e-95
Identities = 77/252 (30%), Positives = 127/252 (50%), Gaps = 2/252 (0%)
Query: 384 MGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHH 443
M R T + + V+ G + S C++ + W ++A + +RC
Sbjct: 2 MSVRTRLRTPMNLPKLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYMA 61
Query: 444 DVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHN 503
+++A+GG+NG R +V+ Y+ ++QW+ +A M RS A L G +Y GGF+G
Sbjct: 62 GLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGST 121
Query: 504 CLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMC--NGEKYNPV 561
L+S E Y+ + N+W + PM RRS V +Y +GG++ SR C E YN
Sbjct: 122 GLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNAT 181
Query: 562 TKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIY 621
T W+ + +M RS + V++++++A+GG +G VE YD T+ W + DMN+
Sbjct: 182 TNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMC 241
Query: 622 RSALSACVIMGL 633
R C + GL
Sbjct: 242 RRNAGVCAVNGL 253
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Length = 302 | Back alignment and structure |
|---|
Score = 278 bits (714), Expect = 2e-88
Identities = 85/242 (35%), Positives = 124/242 (51%), Gaps = 7/242 (2%)
Query: 350 LFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMG-PRAYHGTAVIGYNIYVIGGFDGN 408
+FA+GG++G V++YD D+W + M R+ G AV+ +Y +GGFDG+
Sbjct: 64 VFAVGGFNGSLRVRTVDSYDPVKDQWTSVA---NMRDRRSTLGAAVLNGLLYAVGGFDGS 120
Query: 409 EYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQ--NSVEKYNY 466
+S +N + W +APMN +R V V ++YA+GGY+ RQ ++VE YN
Sbjct: 121 TGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNA 180
Query: 467 TENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRH 526
T N+W+ IA M+ RS A L +Y GG +G S EVYDP N W + M
Sbjct: 181 TTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNM 240
Query: 527 RRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQV-PDMYNPRSNFAIEVIDD 585
R A + +YV+GG +G + + E YNP T W+ V M RS + VID
Sbjct: 241 CRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVSSCMSTGRSYAGVTVIDK 300
Query: 586 MI 587
+
Sbjct: 301 RL 302
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Length = 308 | Back alignment and structure |
|---|
Score = 367 bits (943), Expect = e-122
Identities = 103/298 (34%), Positives = 150/298 (50%), Gaps = 14/298 (4%)
Query: 342 RPRVPH-----EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPM-GPRAYHGTAVI 395
PR H +++ GG+ S ++E Y+ W+++ + PR+ V+
Sbjct: 14 VPRGSHAPKVGRLIYTAGGYFRQS-LSYLEAYNPSNGTWLRLA---DLQVPRSGLAGCVV 69
Query: 396 GYNIYVIGGF----DGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGG 451
G +Y +GG DGN ++ C+N +T W APM+ R + V IYA+GG
Sbjct: 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGG 129
Query: 452 YNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVY 511
+G NSVE+Y ++W L+APM R L +Y GGF+G N LNS E Y
Sbjct: 130 SHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECY 189
Query: 512 DPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDM 571
PE N+W +I M RSG H CIY GG++G ++ + E+Y+ T+TW+ V M
Sbjct: 190 YPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPM 249
Query: 572 YNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACV 629
+ RS I V I+ +GG++G T + VECYD TD W E T M RS + V
Sbjct: 250 KHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTRMTSGRSGVGVAV 307
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Length = 308 | Back alignment and structure |
|---|
Score = 283 bits (726), Expect = 3e-90
Identities = 82/252 (32%), Positives = 122/252 (48%), Gaps = 6/252 (2%)
Query: 386 PRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDV 445
PR H V IY GG+ + + +N W +A + R ++ V +
Sbjct: 15 PRGSHAPKVGRL-IYTAGGYFR-QSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGL 72
Query: 446 IYAMGGYN----GQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNG 501
+YA+GG N G ++++ YN NQWS APM+V R+ + G IY GG +G
Sbjct: 73 LYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHG 132
Query: 502 HNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPV 561
NS E Y+PE ++W L+ PM RR GV + +Y +GGF+G +R+ + E Y P
Sbjct: 133 CIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPE 192
Query: 562 TKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIY 621
W + M RS + V+ + I+A GG++G + VE YD +T+ W M
Sbjct: 193 RNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHR 252
Query: 622 RSALSACVIMGL 633
RSAL V G
Sbjct: 253 RSALGITVHQGR 264
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Length = 306 | Back alignment and structure |
|---|
Score = 344 bits (885), Expect = e-114
Identities = 72/313 (23%), Positives = 112/313 (35%), Gaps = 20/313 (6%)
Query: 342 RPRVP-HEILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPM-GPRAYHGTAVIGYNI 399
RPR H+ A+ G GS ++ + W + R +
Sbjct: 5 RPRRKKHDYRIALFG---GSQPQSCRYFNPKDYSW---TDIRCPFEKRRDAACVFWDNVV 58
Query: 400 YVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYN-GQRRQ 458
Y++GG C+N V W R ++ IY GG G
Sbjct: 59 YILGGSQLF-PIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSAL 117
Query: 459 NSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHN----CLNSCEVYDPE 514
E Y+ W M +R G IY+ GG G+N LNSCEVYDP
Sbjct: 118 YLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPA 177
Query: 515 CNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNP 574
WT + PM R + + I+ +GG NG+ + N E Y+ W V M
Sbjct: 178 TETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWK 237
Query: 575 RSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACVIMGLP 634
+ +++ + GF GV + H+ Y+ +TD+W + + +
Sbjct: 238 GVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETDKWVANSKVRAFPVTSCLIC----- 292
Query: 635 NVYDYIHQHRDSL 647
V D + ++L
Sbjct: 293 -VVDTCGANEETL 304
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Length = 318 | Back alignment and structure |
|---|
Score = 327 bits (840), Expect = e-107
Identities = 60/317 (18%), Positives = 114/317 (35%), Gaps = 31/317 (9%)
Query: 342 RPRVP---HEILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYN 398
PR +++ + + YD + PR +
Sbjct: 7 IPRHGMFVKDLILLVNDTA-------AVAYDPMENECYLTAL-AEQIPRNHSSIVTQQNQ 58
Query: 399 IYVIGGFDGNEY------YNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGY 452
+YV+GG +E + + V+ W + P+ RC D IY + G
Sbjct: 59 VYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEVDDKIYVVAGK 118
Query: 453 N--GQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGG-FNGHNCLNSCE 509
+ + +SV Y+ +WS + + ++ + + G IY GG + C N
Sbjct: 119 DLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVF 178
Query: 510 VYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVP 569
+Y+P+ W + PM+ RS + I + GG + E ++ T W +
Sbjct: 179 IYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMT 238
Query: 570 DMYNPRSNFAIEVIDDMIFAIGGFNGV---------TTIYHVECYDEKTDEWYEATDMNI 620
+ RS+ ++ + ++AIGGF + T + + Y++ EW
Sbjct: 239 EFPQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGMLKEI- 297
Query: 621 YRSALSACVIMGLPNVY 637
R A A + N++
Sbjct: 298 -RYASGASCLATRLNLF 313
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Length = 318 | Back alignment and structure |
|---|
Score = 262 bits (672), Expect = 3e-82
Identities = 59/264 (22%), Positives = 98/264 (37%), Gaps = 26/264 (9%)
Query: 350 LFAIGGWSGG------SPTDFVETYDTRADRWVKIEQVDPMG-PRAYHGTAVIGYNIYVI 402
++ +GG + D + WV + P+ R G + IYV+
Sbjct: 59 VYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLP---PLPSARCLFGLGEVDDKIYVV 115
Query: 403 GGFD--GNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGY-NGQRRQN 459
G D +S C++ V W E+ + K + H+ +IY +GG + ++ N
Sbjct: 116 AGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTN 175
Query: 460 SVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWT 519
V YN + W +APM RS +GKI I GG S E +D + N+W
Sbjct: 176 RVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWE 235
Query: 520 LIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNG---------EKYNPVTKTWSQVPD 570
++ RS +S ++ +Y IGGF + KY K W+ +
Sbjct: 236 VMTEFPQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGMLK 295
Query: 571 MYNPRSNFAIEVIDDMI--FAIGG 592
R + + F +
Sbjct: 296 E--IRYASGASCLATRLNLFKLSK 317
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Length = 315 | Back alignment and structure |
|---|
Score = 319 bits (819), Expect = e-104
Identities = 63/309 (20%), Positives = 109/309 (35%), Gaps = 29/309 (9%)
Query: 347 HEILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFD 406
+++F I YD A+ + P+ + ++V GG
Sbjct: 4 QDLIFMISEEG-------AVAYDPAANEC-YCASLSSQVPKNHVSLVTKENQVFVAGGLF 55
Query: 407 GNEY------YNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGY---NGQRR 457
NE F+ + W + P+ RC + IY +GG +G+R
Sbjct: 56 YNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERC 115
Query: 458 QNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFN-GHNCLNSCEVYDPECN 516
+SV Y+ +W P+ + + +Y+ GG CLN VYDP+
Sbjct: 116 LDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKF 175
Query: 517 QWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRS 576
+W + PM+ RS + I V G + E Y+ W+ RS
Sbjct: 176 EWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERS 235
Query: 577 NFAIEVIDDMIFAIGGFNGV---------TTIYHVECYDEKTDEWYEATDMNIYRSALSA 627
+ ++ + ++AIGGF + T + + Y+E+ +W A A
Sbjct: 236 SLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVLREI--AYAAGA 293
Query: 628 CVIMGLPNV 636
+ NV
Sbjct: 294 TFLPVRLNV 302
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Length = 315 | Back alignment and structure |
|---|
Score = 271 bits (694), Expect = 2e-85
Identities = 60/271 (22%), Positives = 101/271 (37%), Gaps = 25/271 (9%)
Query: 350 LFAIGGW------SGGSPTDFVETYDTRADRWVKIEQVDPMG-PRAYHGTAVIGYNIYVI 402
+F GG + + +D W+ + P+ PR G +IYV+
Sbjct: 48 VFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMP---PLPSPRCLFGLGEALNSIYVV 104
Query: 403 GGF---DGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYN-GQRRQ 458
GG DG +S C++ ++ W E P+ + + H D++Y +GG ++
Sbjct: 105 GGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCL 164
Query: 459 NSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQW 518
N + Y+ + +W +APM RS AT G+I + G +S EVY N+W
Sbjct: 165 NKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKW 224
Query: 519 TLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNG---------EKYNPVTKTWSQVP 569
E RS +S ++ +Y IGGF + +YN K W V
Sbjct: 225 APFEAFPQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVL 284
Query: 570 DMYNPRSNFAIEVIDDMIFAIGGFNGVTTIY 600
+ + + +Y
Sbjct: 285 RE--IAYAAGATFLPVRLNVLRLTKMAENLY 313
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Length = 315 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 2e-05
Identities = 11/56 (19%), Positives = 19/56 (33%), Gaps = 10/56 (17%)
Query: 583 IDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA-TDMNIYRSALSACVIMGLPNVY 637
+ D+IF I YD +E Y A + ++ +S V+
Sbjct: 3 LQDLIFMISEEG-------AVAYDPAANECYCASLSSQVPKNHVSLVTKEN--QVF 49
|
| >3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B Length = 256 | Back alignment and structure |
|---|
Score = 290 bits (744), Expect = 1e-93
Identities = 72/243 (29%), Positives = 134/243 (55%), Gaps = 4/243 (1%)
Query: 76 SVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKF-S 134
+ + ++AL+ FRE++ CDA +V D P+ +NIL A S Y R + +
Sbjct: 15 AARLLRALSSFREESRFCDAHLV-LDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTY 73
Query: 135 LVEIPGVDASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLTTP 194
+E+ G+ VM +++Y + ++ + ED + ++ A D ++ + LCC+F++
Sbjct: 74 KIELEGISVMVMREILDYIFSGQIRLNEDTIQDVVQAADLLLLTDLKTLCCEFLEGCIAA 133
Query: 195 RNCFGILLFSRDHFCKKLEEWTRKYILRNFVDVARESEEIVFISEQELEEIISSDELNVK 254
NC GI F+ + + +Y+ +F DV+ +EE + +S Q+L+E+IS ++LNV
Sbjct: 134 ENCIGIRDFALHYCLHHVHYLATEYLETHFRDVSS-TEEFLELSPQKLKEVISLEKLNVG 192
Query: 255 SEETVWELIIRWIDYDPENRKKHIVSLMKNIRLGLLETEFFREKVKHHPYVQ-STPECRP 313
+E V+E +IRWI +D E RK H+ +M + + L++ + RE++ + P V+ EC
Sbjct: 193 NERYVFEAVIRWIAHDTEIRKVHMKDVMSALWVSGLDSSYLREQMLNEPLVREIVKECSN 252
Query: 314 III 316
I +
Sbjct: 253 IPL 255
|
| >3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} Length = 279 | Back alignment and structure |
|---|
Score = 290 bits (744), Expect = 2e-93
Identities = 60/254 (23%), Positives = 115/254 (45%), Gaps = 10/254 (3%)
Query: 76 SVQAMQALNEFREKNLLCDATIVL--ADNSHFPIHRNILCACSDYFRALFTTSLHDQEKF 133
+ NE R + L CD T+ A F HR++L A ++YF L + +
Sbjct: 16 CSELSWRQNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESRS- 74
Query: 134 SLVEI------PGVDASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDF 187
VE+ PG + + ++IEY Y ++ ++ +V +L D F + + ++ C +F
Sbjct: 75 GRVEMRKWSSEPGPEPDTVEAVIEYMYTGRIRVSTGSVHEVLELADRFLLIRLKEFCGEF 134
Query: 188 IKRLTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDVARESEEIVFISEQELEEIIS 247
+K+ NC I + + +L I RNF V + EE + + + +S
Sbjct: 135 LKKKLHLSNCVAIHSLAHMYTLSQLALKAADMIRRNFHKVIQ-DEEFYTLPFHLIRDWLS 193
Query: 248 SDELNVKSEETVWELIIRWIDYDPENRKKHIVSLMKNIRLGLLETEFFREKVKHHPYVQS 307
E+ V SEE ++E +++W+ + E R+++ L K +RL ++ + VK V +
Sbjct: 194 DLEITVDSEEVLFETVLKWVQRNAEERERYFEELFKLLRLSQMKPTYLTRHVKPERLVAN 253
Query: 308 TPECRPIIIETFKF 321
C ++ + +
Sbjct: 254 NEVCVKLVADAVER 267
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Length = 357 | Back alignment and structure |
|---|
Score = 196 bits (500), Expect = 7e-57
Identities = 47/312 (15%), Positives = 96/312 (30%), Gaps = 45/312 (14%)
Query: 350 LFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGN- 408
++ G +G + + + +W + P GPR +A I N+YV GG N
Sbjct: 22 VYIGLGSAGTA--WYKLDTQAKDKKWTALAAF-PGGPRDQATSAFIDGNLYVFGGIGKNS 78
Query: 409 ----EYYNSCRCFNAVTKVWKEIAPMN-FKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEK 463
+ +N +N T W ++ T VH+ Y GG N E
Sbjct: 79 EGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFED 138
Query: 464 YNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEP 523
N + I +N Y + +DP QW+
Sbjct: 139 LNEAGKDSTAIDKINAH-------------YFDKKAEDYFFNKFLLSFDPSTQQWSYAGE 185
Query: 524 M-RHRRSGVSCIAYHECIYVIGGFNGMSRMCN---GEKYNPVTKTWSQVPDMYNPRS--N 577
+ +G + + + ++I G + + W+++ + +P
Sbjct: 186 SPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAG 245
Query: 578 FAIEVIDDMIFAIGGFN-----------------GVTTIYHVECYDEKTDEWYEATDMNI 620
+ +D + GG G+ Y + + +W ++ +++
Sbjct: 246 GFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQ 305
Query: 621 YRSALSACVIMG 632
R+ +
Sbjct: 306 GRAYGVSLPWNN 317
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Length = 357 | Back alignment and structure |
|---|
Score = 171 bits (435), Expect = 9e-48
Identities = 47/260 (18%), Positives = 79/260 (30%), Gaps = 28/260 (10%)
Query: 386 PRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPM-NFKRCYVSTAVHHD 444
P A+ +Y+ G G +Y A K W +A R ++A
Sbjct: 9 PFKSGTGAIDNDTVYIGLGSAGTAWY--KLDTQAKDKKWTALAAFPGGPRDQATSAFIDG 66
Query: 445 VIYAMGGYNGQRRQ-----NSVEKYNYTENQWSLIAPMN-VERSDASATTLQGKIYITGG 498
+Y GG N V KYN N W + + + GK Y+TGG
Sbjct: 67 NLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGG 126
Query: 499 FNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKY 558
N + E + T I+ + Y FN +
Sbjct: 127 VNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDY--------FFNK-----FLLSF 173
Query: 559 NPVTKTWSQVPDM-YNPRSNFAIEVIDDMIFAIGGF--NGVTTIY-HVECYDEKTDEWYE 614
+P T+ WS + + + A+ D + I G G+ T + +W +
Sbjct: 174 DPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNK 233
Query: 615 ATDMNI--YRSALSACVIMG 632
++ + A +
Sbjct: 234 LAPVSSPDGVAGGFAGISND 253
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Length = 357 | Back alignment and structure |
|---|
Score = 162 bits (410), Expect = 3e-44
Identities = 41/276 (14%), Positives = 80/276 (28%), Gaps = 46/276 (16%)
Query: 350 LFAIGGWSGGS-----PTDFVETYDTRADRWVKIEQVDPMG-PRAYHGTAVIGYNIYVIG 403
L+ GG S + V Y+ + + WVK+ + A H T V YV G
Sbjct: 68 LYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKL--MSHAPMGMAGHVTFVHNGKAYVTG 125
Query: 404 GFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEK 463
G + N + N K I +N +N +
Sbjct: 126 GVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAED--------YFFN-----KFLLS 172
Query: 464 YNYTENQWSLIAPMNVE-RSDASATTLQGKIYITGGFNGHNCLNSCEVY----DPECNQW 518
++ + QWS + A+ K ++ G L + V+ +W
Sbjct: 173 FDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPG-LRTDAVFELDFTGNNLKW 231
Query: 519 TLI--EPMRHRRSGVSCIAYHECIYVIGGFN-----------------GMSRMCNGEKYN 559
+ +G ++ + GG G+ + + + +
Sbjct: 232 NKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHL 291
Query: 560 PVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNG 595
W + ++ R+ ++ + IGG
Sbjct: 292 WHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGGETA 327
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Length = 357 | Back alignment and structure |
|---|
Score = 154 bits (390), Expect = 1e-41
Identities = 41/215 (19%), Positives = 75/215 (34%), Gaps = 26/215 (12%)
Query: 427 IAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNY--TENQWSLIAPM-NVERSD 483
+ + A+ +D +Y G G + K + + +W+ +A R
Sbjct: 3 LPETPVPFKSGTGAIDNDTVYIGLGSAG----TAWYKLDTQAKDKKWTALAAFPGGPRDQ 58
Query: 484 ASATTLQGKIYITGGFNGHNC-----LNSCEVYDPECNQWT-LIEPMRHRRSGVSCIAYH 537
A++ + G +Y+ GG ++ N Y+P+ N W L+ +G ++
Sbjct: 59 ATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHN 118
Query: 538 ECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVT 597
YV GG N E N K + + + + E FN
Sbjct: 119 GKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAED--------YFFNK-- 168
Query: 598 TIYHVECYDEKTDEWYEATDMNIYRSALSACVIMG 632
+ +D T +W A + Y +A +A V G
Sbjct: 169 ---FLLSFDPSTQQWSYAGESPWYGTAGAAVVNKG 200
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Length = 357 | Back alignment and structure |
|---|
Score = 130 bits (328), Expect = 3e-33
Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 9/175 (5%)
Query: 472 SLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPM-RHRRSG 530
S++ V + +YI G G + +WT + R
Sbjct: 1 SVLPETPVPFKSGTGAIDNDTVYIGLGSAGTAWY--KLDTQAKDKKWTALAAFPGGPRDQ 58
Query: 531 VSCIAYHECIYVIGGFNGMSRMCN-----GEKYNPVTKTWSQVPD-MYNPRSNFAIEVID 584
+ +YV GG S KYNP T +W ++ + V +
Sbjct: 59 ATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHN 118
Query: 585 DMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACVIMGLPNVYDY 639
+ GG N + E +E + +N + A + +
Sbjct: 119 GKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSF 173
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Length = 357 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 4e-28
Identities = 26/206 (12%), Positives = 59/206 (28%), Gaps = 25/206 (12%)
Query: 346 PHEILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGF 405
+ F+ ++D +W + P A G ++I G
Sbjct: 151 KINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGES-PWYGTAGAAVVNKGDKTWLINGE 209
Query: 406 DGNEYYNS---CRCFNAVTKVWKEIAPMNFKRCYV--STAVHHDVIYAMGGYN------- 453
F W ++AP++ + +D + GG
Sbjct: 210 AKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSREN 269
Query: 454 ----------GQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFN-GH 502
G ++ S + + + +W ++ R+ + + I GG G
Sbjct: 270 YQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGGETAGG 329
Query: 503 NCLNSCEVYDPECNQWTLIEPMRHRR 528
+ + + N+ T ++ + H
Sbjct: 330 KAVTDSVLITVKDNKVT-VQNLEHHH 354
|
| >2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus} Length = 135 | Back alignment and structure |
|---|
Score = 147 bits (373), Expect = 8e-42
Identities = 34/132 (25%), Positives = 58/132 (43%), Gaps = 6/132 (4%)
Query: 76 SVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSL 135
SV+ +Q LN+ REK CDAT+ F H ++L CS +F+ ++
Sbjct: 9 SVRVLQELNKQREKGQYCDATLD-VGGLVFKAHWSVLACCSHFFQRIYGDGTGGS----- 62
Query: 136 VEIPGVDASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLTTPR 195
V +P A + L+++ Y L +T N +LLA + +A +LC F + + +
Sbjct: 63 VVLPAGFAEIFGLLLDFFYTGHLALTSGNRDQVLLAAKELRVPEAVELCQSFQPQTSVGQ 122
Query: 196 NCFGILLFSRDH 207
G+
Sbjct: 123 AQSGLGQSGPSS 134
|
| >2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} Length = 144 | Back alignment and structure |
|---|
Score = 136 bits (344), Expect = 1e-37
Identities = 31/115 (26%), Positives = 62/115 (53%), Gaps = 2/115 (1%)
Query: 76 SVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKF-S 134
+ + ++AL+ FRE++ CDA +V D P+ +NIL A S Y R + +
Sbjct: 31 AARLLRALSSFREESRFCDAHLV-LDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTY 89
Query: 135 LVEIPGVDASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIK 189
+E+ G+ VM +++Y + ++ + ED + ++ A D ++ + LCC+F++
Sbjct: 90 KIELEGISVMVMREILDYIFSGQIRLNEDTIQDVVQAADLLLLTDLKTLCCEFLE 144
|
| >3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens} Length = 119 | Back alignment and structure |
|---|
Score = 134 bits (339), Expect = 2e-37
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 6/115 (5%)
Query: 76 SVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSL 135
SV+ +Q LN+ REK CDAT+ F H ++L CS +F++L+
Sbjct: 8 SVRVLQELNKQREKGQYCDATLD-VGGLVFKAHWSVLACCSHFFQSLYGDGSGGS----- 61
Query: 136 VEIPGVDASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKR 190
V +P A + L+++ Y L +T N +LLA + +A +LC F +
Sbjct: 62 VVLPAGFAEIFGLLLDFFYTGHLALTSGNRDQVLLAARELRVPEAVELCQSFKPK 116
|
| >3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens} Length = 172 | Back alignment and structure |
|---|
Score = 135 bits (343), Expect = 4e-37
Identities = 35/150 (23%), Positives = 62/150 (41%), Gaps = 2/150 (1%)
Query: 80 MQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIP 139
L E + D + +A F H+ IL A S F A+F + + +K + VEI
Sbjct: 22 ADELGGLWENSRFTDCCLCVAGQE-FQAHKAILAARSPVFSAMFEHEMEESKK-NRVEIN 79
Query: 140 GVDASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLTTPRNCFG 199
V+ V ++ + Y K + LL A D + + + + +C D + + N
Sbjct: 80 DVEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAE 139
Query: 200 ILLFSRDHFCKKLEEWTRKYILRNFVDVAR 229
IL+ + H +L+ +I + DV
Sbjct: 140 ILILADLHSADQLKTQAVDFINYHATDVLE 169
|
| >2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens} Length = 116 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 4e-37
Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 4/114 (3%)
Query: 76 SVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSL 135
++ LN+ RE LCD TIV F HRN+L + S+YF A++ ++ +
Sbjct: 6 CEHLLERLNKQREAGFLCDCTIV-IGEFQFKAHRNVLASFSEYFGAIYRSTSENNVF--- 61
Query: 136 VEIPGVDASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIK 189
++ V A L+E+ Y L++ NV + A D+ + + C ++
Sbjct: 62 LDQSQVKADGFQKLLEFIYTGTLNLDSWNVKEIHQAADYLKVEEVVTKCKIKME 115
|
| >2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A Length = 119 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 6e-37
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 7/114 (6%)
Query: 76 SVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSL 135
S ++ LN+ R+ LLCD T V D HF H+ +L ACS+YF+ LF +
Sbjct: 11 SQHVLEQLNQQRQLGLLCDCTFV-VDGVHFKAHKAVLAACSEYFKMLFVDQK------DV 63
Query: 136 VEIPGVDASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIK 189
V + +A+ + ++E+ Y KL ++ +NV +L F M C
Sbjct: 64 VHLDISNAAGLGQVLEFMYTAKLSLSPENVDDVLAVATFLQMQDIITACHALKS 117
|
| >2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A Length = 120 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 7e-37
Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Query: 76 SVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSL 135
S + LNE R + LLCD I+ + FP HR++L ACS YF+ LFT+ ++ ++
Sbjct: 9 SSDILSGLNEQRTQGLLCDVVIL-VEGREFPTHRSVLAACSQYFKKLFTSGAVVDQQ-NV 66
Query: 136 VEIPGVDASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFI 188
EI V A +T+L+++AY L ++ NV +L A + +C D +
Sbjct: 67 YEIDFVSAEALTALMDFAYTATLTVSTANVGDILSAARLLEIPAVSHVCADLL 119
|
| >1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A Length = 127 | Back alignment and structure |
|---|
Score = 132 bits (334), Expect = 1e-36
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 2/114 (1%)
Query: 76 SVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSL 135
+ + LN R +++L D IV F H+ +L ACS F ++FT L +
Sbjct: 13 ASDVLLNLNRLRSRDILTDVVIV-VSREQFRAHKTVLMACSGLFYSIFTDQLKRNLS-VI 70
Query: 136 VEIPGVDASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIK 189
P ++ L+++ Y +L++ E N+ +++ + M D C FIK
Sbjct: 71 NLDPEINPEGFNILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIK 124
|
| >3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} PDB: 3ohv_A Length = 125 | Back alignment and structure |
|---|
Score = 132 bits (334), Expect = 1e-36
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 3/113 (2%)
Query: 76 SVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSL 135
+ LN+ R+K++LCD T++ + F HR +L ACS+YF + +
Sbjct: 16 CTNILLGLNDQRKKDILCDVTLI-VERKEFRAHRAVLAACSEYFWQALVGQT--KNDLVV 72
Query: 136 VEIPGVDASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFI 188
V A L+++AY KL ++ +N+ ++ +F M +D C F+
Sbjct: 73 SLPEEVTARGFGPLLQFAYTAKLLLSRENIREVIRCAEFLRMHNLEDSCFSFL 125
|
| >2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens} Length = 124 | Back alignment and structure |
|---|
Score = 131 bits (331), Expect = 4e-36
Identities = 32/114 (28%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Query: 76 SVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSL 135
S + +LN+ R+K++LCD TI + F HR++L ACS YF + + ++
Sbjct: 13 STNVLLSLNDQRKKDVLCDVTIF-VEGQRFRAHRSVLAACSSYFHSRIVG--QADGELNI 69
Query: 136 VEIPGVDASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIK 189
V LI++AY KL ++++NV + +F + ++ C F+K
Sbjct: 70 TLPEEVTVKGFEPLIQFAYTAKLILSKENVDEVCKCVEFLSVHNIEESCFQFLK 123
|
| >2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus} Length = 138 | Back alignment and structure |
|---|
Score = 130 bits (330), Expect = 7e-36
Identities = 32/122 (26%), Positives = 60/122 (49%), Gaps = 4/122 (3%)
Query: 76 SVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSL 135
S + +LN+ R+K++LCD T++ + F HR++L ACS YF + + ++
Sbjct: 20 STNVLLSLNDQRKKDVLCDVTVL-VEGQRFRAHRSVLAACSSYFHSRIVG--QTDAELTV 76
Query: 136 VEIPGVDASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIK-RLTTP 194
V LI++AY KL +++DNV + +F + ++ C F+K +
Sbjct: 77 TLPEEVTVKGFEPLIQFAYTAKLILSKDNVDEVCRCVEFLSVHNIEESCFQFLKFKFLDS 136
Query: 195 RN 196
+
Sbjct: 137 TS 138
|
| >3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens} Length = 129 | Back alignment and structure |
|---|
Score = 130 bits (329), Expect = 7e-36
Identities = 26/118 (22%), Positives = 48/118 (40%), Gaps = 5/118 (4%)
Query: 76 SVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSL 135
++ LNE R + L CD ++V F HR +L A S YFR LF S +
Sbjct: 17 GNSILECLNEQRLQGLYCDVSVV-VKGHAFKAHRAVLAASSSYFRDLFNNSRSA----VV 71
Query: 136 VEIPGVDASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLTT 193
V ++ + Y +L + + L+ F + + + +F ++++
Sbjct: 72 ELPAAVQPQSFQQILSFCYTGRLSMNVGDQDLLMYTAGFLQIQEIMEKGTEFFLKVSS 129
|
| >1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A Length = 121 | Back alignment and structure |
|---|
Score = 128 bits (325), Expect = 2e-35
Identities = 24/116 (20%), Positives = 45/116 (38%), Gaps = 7/116 (6%)
Query: 76 SVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSL 135
+ N+ R LCD I+ D+ F HR +L S F LF + +
Sbjct: 12 PTGLLCKANQMRLAGTLCDVVIM-VDSQEFHAHRTVLACTSKMFEILFHR---NSQH--- 64
Query: 136 VEIPGVDASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRL 191
+ + ++EYAY L +++ LL A + + ++ C ++ +
Sbjct: 65 YTLDFLSPKTFQQILEYAYTATLQAKAEDLDDLLYAAEILEIEYLEEQCLKMLETI 120
|
| >3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A Length = 312 | Back alignment and structure |
|---|
Score = 128 bits (323), Expect = 6e-33
Identities = 42/225 (18%), Positives = 80/225 (35%), Gaps = 16/225 (7%)
Query: 14 ESYAHRTTTDTDFSLKIRASTIGYLPI---SEDMASRLDLTEDDMTHIENAIKNKKNFSS 70
E+ A + F + G+ + L DD + + ++ +
Sbjct: 88 ETKAMESQRAYRFV---QGKDWGFKKFIRRGFLLDEANGLLPDDKLTLFCEVSVVQDSVN 144
Query: 71 IDRAMSVQA--------MQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRAL 122
I ++ L E + D + F H+ IL A S F A+
Sbjct: 145 ISGQNTMNMVKVPECRLADELGGLWENSRFTDCCLC-VAGQEFQAHKAILAARSPVFSAM 203
Query: 123 FTTSLHDQEKFSLVEIPGVDASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQD 182
F + + +K + VEI V+ V ++ + Y K + LL A D + + + +
Sbjct: 204 FEHEMEESKK-NRVEINDVEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKV 262
Query: 183 LCCDFIKRLTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDV 227
+C D + + N IL+ + H +L+ +I + DV
Sbjct: 263 MCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYHATDV 307
|
| >4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens} Length = 145 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 4e-32
Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 2/133 (1%)
Query: 80 MQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIP 139
L E + D + F H+ IL A S F A+F + + +K + VEI
Sbjct: 13 ADELGGLWENSRFTDCCLC-VAGQEFQAHKAILAARSPVFSAMFEHEMEESKK-NRVEIN 70
Query: 140 GVDASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLTTPRNCFG 199
V+ V ++ + Y K + LL A D + + + + +C D + + N
Sbjct: 71 DVEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAE 130
Query: 200 ILLFSRDHFCKKL 212
IL+ + H +L
Sbjct: 131 ILILADLHSADQL 143
|
| >3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} Length = 119 | Back alignment and structure |
|---|
Score = 112 bits (283), Expect = 1e-29
Identities = 17/106 (16%), Positives = 29/106 (27%), Gaps = 11/106 (10%)
Query: 84 NEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIPGVDA 143
R + LCD I + FP H +L S G+
Sbjct: 22 LAARLRPALCDTLIT-VGSQEFPAHSLVLAGVSQQLGRRGQW----------ALGEGISP 70
Query: 144 SVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIK 189
S L+ + Y + + + L A + ++ C
Sbjct: 71 STFAQLLNFVYGESVELQPGELRPLQEAARALGVQSLEEACWRARG 116
|
| >3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A Length = 116 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 3e-28
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 8/121 (6%)
Query: 64 NKKNFSSIDRAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALF 123
++K S+ D S + +LNE R L CD T++ ++ F H+NIL A S YF LF
Sbjct: 3 SRKLISATDIQYSGSLLNSLNEQRGHGLFCDVTVI-VEDRKFRAHKNILSASSTYFHQLF 61
Query: 124 TTSLHDQEKFSLVEIPGVDASVMTSLIEYAYLRKL-HITEDNVASLLLATDFFCMSKAQD 182
+ + +VE+ + A + ++ Y Y K+ + D + L+ + +
Sbjct: 62 SVAG------QVVELSFIRAEIFAEILNYIYSSKIVRVRSDLLDELIKSGQLLGVKFIAA 115
Query: 183 L 183
L
Sbjct: 116 L 116
|
| >2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens} Length = 109 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 7e-28
Identities = 25/107 (23%), Positives = 43/107 (40%), Gaps = 5/107 (4%)
Query: 87 REKNLLCDATIV---LADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIPGVDA 143
L+ D V P H+ +L S F A+F L E S + IP V+
Sbjct: 3 FNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDL--AEVKSEIHIPDVEP 60
Query: 144 SVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKR 190
+ L++Y Y ++ + D V + L A + + C +F++
Sbjct: 61 AAFLILLKYMYSDEIDLEADTVLATLYAAKKYIVPALAKACVNFLET 107
|
| >2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 105 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 1e-27
Identities = 19/95 (20%), Positives = 39/95 (41%), Gaps = 4/95 (4%)
Query: 193 TPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDVARESEEIVFISEQELEEIISSDELN 252
NC ++ + H +L + + + +EE + + + L +IIS
Sbjct: 9 QVGNCLQVMWLADRHSDPELYTAAKHCAKTHLAQLQ-NTEEFLHLPHRLLTDIISDG--- 64
Query: 253 VKSEETVWELIIRWIDYDPENRKKHIVSLMKNIRL 287
V + E I WI+++ E R+ SL +++
Sbjct: 65 VPCSQNPTEAIEAWINFNKEEREAFAESLRTSLKE 99
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Length = 695 | Back alignment and structure |
|---|
Score = 114 bits (285), Expect = 2e-26
Identities = 48/371 (12%), Positives = 105/371 (28%), Gaps = 41/371 (11%)
Query: 258 TVWELIIRWIDYDPENRKKHIVSLMKNIRLGLLETEFFREKVKHHPYVQSTPECRPIIIE 317
+++ + D + + + L + ++ T
Sbjct: 308 DMFQ-LWESADEATKKELLKVEPFDELEEFHLFCHHYVLCHATNYKEFAFTQGFLFDRSI 366
Query: 318 TFKFLYDLELIAQIDGEVPTPEI-ARPRVPHEILFAIGGWSGGSPTDFVETYDTRADRWV 376
+ L E ++ E P V +F +GG + + ++ D+
Sbjct: 367 SEINLTVDEDYQLLECECPINRKFGDVDVAGNDVFYMGGSNPYRVNEILQ-LSIHYDKID 425
Query: 377 KIEQVDPMG----PRAYHGTAVIGYN--IYVIGGFDGNE-YYNSCRCFNAVTKVWKEIAP 429
R H I N + +IGG + F+ T+ W I
Sbjct: 426 MKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKS 485
Query: 430 MNFKRCY-VSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVE-------R 481
++ R + ++ + +GG ++ YN TE + + P +
Sbjct: 486 LSHTRFRHSACSLPDGNVLILGGVTEG---PAMLLYNVTEEIFKDVTPKDEFFQNSLVSA 542
Query: 482 SDASATTLQGKIYITGGFNGHNCLN-SCEVYDPECNQWT--------LIEPMRHRRSGVS 532
+ I + GGF ++ ++ + T L P+ R
Sbjct: 543 GLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQI 602
Query: 533 CIAYHECIYVIGGFNGMSRMCNG---EKYNPVTKTWSQVPDMYNPRSNF--------AIE 581
+ ++GG + +P+++T + +P + +
Sbjct: 603 KYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLTSIPISRRIWEDHSLMLAGFSLVS 662
Query: 582 VIDDMIFAIGG 592
I IGG
Sbjct: 663 TSMGTIHIIGG 673
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Length = 695 | Back alignment and structure |
|---|
Score = 101 bits (252), Expect = 2e-22
Identities = 42/287 (14%), Positives = 93/287 (32%), Gaps = 31/287 (10%)
Query: 355 GWSGGSPTDFVETYD-------TRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDG 407
G++ + D + ++ + ++++ +H N G
Sbjct: 300 GFAYVNVGDMFQLWESADEATKKELLKVEPFDELEEFHLFCHHYVLCHATNYKEFAFTQG 359
Query: 408 NEYYNSCRCFNAVTKVWKEIAPMNF--KRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYN 465
+ S N ++ R + V + ++ MGG N R N + + +
Sbjct: 360 FLFDRSISEINLTVDEDYQLLECECPINRKFGDVDVAGNDVFYMGGSNPYRV-NEILQLS 418
Query: 466 YTENQWSLI------APMNVERSDASATTL--QGKIYITGGFNGH-NCLNSCEVYDPECN 516
++ + + + V R + TT+ ++ + GG L+ ++D +
Sbjct: 419 IHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTR 478
Query: 517 QWTLIEPMRHRRSGVSCIAYHE-CIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDM---- 571
+W++I+ + H R S + + + ++GG M YN + + V
Sbjct: 479 EWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAM---LLYNVTEEIFKDVTPKDEFF 535
Query: 572 ---YNPRSNFAIEVIDDMIFAIGGFNGVTTIY-HVECYDEKTDEWYE 614
V I GGF TT+ + + E
Sbjct: 536 QNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATE 582
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Length = 695 | Back alignment and structure |
|---|
Score = 49.7 bits (118), Expect = 3e-06
Identities = 21/138 (15%), Positives = 39/138 (28%), Gaps = 10/138 (7%)
Query: 502 HNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPV 561
+ S + + L R ++ +GG N R+ + +
Sbjct: 362 FDRSISEINLTVDEDYQLLECECPINRKFGDVDVAGNDVFYMGGSNP-YRVNEILQLSIH 420
Query: 562 TKTWSQV------PDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYH-VECYDEKTDEW 612
++ R I ++ + IGG +D KT EW
Sbjct: 421 YDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREW 480
Query: 613 YEATDMNIYRSALSACVI 630
++ R SAC +
Sbjct: 481 SMIKSLSHTRFRHSACSL 498
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A Length = 656 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 4e-24
Identities = 43/311 (13%), Positives = 83/311 (26%), Gaps = 38/311 (12%)
Query: 356 WSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCR 415
++D G ++ G V+ G +
Sbjct: 212 GGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDA---KKTS 268
Query: 416 CFNAVTKVWKEIAPMNFKRCYVSTAVHHD--VIYAMGGYNGQRRQNSVEKYNYTENQWSL 473
+++ + W M R Y S+A D V G ++G + + E Y+ + W+
Sbjct: 269 LYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTS 328
Query: 474 IAPMNVERSDASATTLQ----GKIYITGGFNGH-----NCLNSCEVYDPECNQWTLIEPM 524
+ V + ++ G G Y
Sbjct: 329 LPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKR 388
Query: 525 RHRRSGVSCI---------AYHECIYVIGGFNGM-----SRMCN---GEKYNPVTKTWSQ 567
+ R A I GG + + + T
Sbjct: 389 QSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFA 448
Query: 568 VPDMYNPRSNF-AIEVIDDMIFAIGG------FNGVTTIYHVECYDEKTDEWYEATDMNI 620
+Y R+ ++ + D F GG F T ++ E Y + D +Y+ +I
Sbjct: 449 SNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSI 508
Query: 621 YRSALSACVIM 631
R S +++
Sbjct: 509 VRVYHSISLLL 519
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A Length = 656 | Back alignment and structure |
|---|
Score = 78.5 bits (192), Expect = 3e-15
Identities = 57/376 (15%), Positives = 104/376 (27%), Gaps = 43/376 (11%)
Query: 347 HEILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYN--IYVIGG 404
HE+ + G + GSP V + AD K + R A+ N +
Sbjct: 102 HEVYLSSDGTNWGSP---VASGSWFADSTTKYSNFETRPARYVRLVAITEANGQPWTSIA 158
Query: 405 FDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNS---- 460
+S W + + + Y S
Sbjct: 159 EINVFQASSYTAPQPGLGRWGPTIDLPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGI 218
Query: 461 --VEKYNYTENQWSLIAPMNVERSDASATTLQ---GKIYITGGFNGHNCLNSCEVYDPEC 515
++ + S + G+I +TGG + +YD
Sbjct: 219 TLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAK----KTSLYDSSS 274
Query: 516 NQWTLIEPMRHRRSGVSCIAYHE-CIYVIGG-FNGMSRMCNGEKYNPVTKTWSQVPDMYN 573
+ W M+ R S + ++ IGG ++G NGE Y+P +KTW+ +P+
Sbjct: 275 DSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKV 334
Query: 574 PRSNFAIE----VIDDMIFAIGGFNGVTTIY-----HVECYDEKTDEWYEATDMNIYRSA 624
A + D+ + G G Y + + A R
Sbjct: 335 NPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGV 394
Query: 625 LSACVIMGLPNVYDYIHQHRDSLMEEKRQKLLAIEGRQRQNQSEEGNSSQQSVL--PSSN 682
+ + K+L G S+ ++ L P ++
Sbjct: 395 APDAMCGNAVMYDAV------------KGKILTFGGSPDYQDSDATTNAHIITLGEPGTS 442
Query: 683 SNVSSSDGVMNNASSM 698
N + + A +
Sbjct: 443 PNTVFASNGLYFARTF 458
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A Length = 656 | Back alignment and structure |
|---|
Score = 41.9 bits (97), Expect = 8e-04
Identities = 17/76 (22%), Positives = 25/76 (32%), Gaps = 13/76 (17%)
Query: 350 LFAIGGWSGG------SPTDFVETYDTRADRWVKIEQVDPMG-PRAYHGTAVI---GYNI 399
F GG G +P E Y D + + +P R YH +++ G
Sbjct: 469 TFITGGQRRGIPFEDSTPVFTPEIYVPEQDTF---YKQNPNSIVRVYHSISLLLPDGRVF 525
Query: 400 YVIGGFDGNEYYNSCR 415
GG G+ N
Sbjct: 526 NGGGGLCGDCTTNHFD 541
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 52.9 bits (126), Expect = 3e-07
Identities = 55/363 (15%), Positives = 105/363 (28%), Gaps = 112/363 (30%)
Query: 6 WVPIVFAPESYAHRTTTDTDFSLKIRASTIGYLPISEDMASRLDLTEDDMTHIENAIKNK 65
W+ + + + +T L++ I + SR D + + I +
Sbjct: 186 WL-------NLKNCNSPETV--LEMLQKL--LYQIDPNWTSRSDHSSNIKLRIHSIQAEL 234
Query: 66 KNFSSIDRAMSVQAMQALNEFREKNLLCDATIVLAD--NS----HFPIHRNILCACSDYF 119
+ + K + +VL + N+ F N+ C
Sbjct: 235 RRL-----------------LKSKP-YENCLLVLLNVQNAKAWNAF----NLSC------ 266
Query: 120 RALFTTSLHDQEKFSLVEIPGVDASVMTSLIEYAYLR------KLHITEDNVASLLLATD 173
+ L TT V L + +T D V SLLL
Sbjct: 267 KILLTTR---------------FKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLK-- 309
Query: 174 FFCMSKAQDL---CCDFIKRLTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDVARE 230
+ + QDL T PR I RD + W K++ + + E
Sbjct: 310 -YLDCRPQDLPREVLT-----TNPRRLSIIAESIRDGLA-TWDNW--KHVNCDKLTTIIE 360
Query: 231 SEEIVFISEQELEEIISS-DEL-----NVKSEETVWELIIRWID---YDPENRKKHIVSL 281
S ++ E E D L + + L + W D D +V+
Sbjct: 361 S----SLNVLEPAEYRKMFDRLSVFPPSAHIPTIL--LSLIWFDVIKSDVMV----VVNK 410
Query: 282 MKNIRLGLLETEFFREKVK-HHPYVQSTPECRP------IIIETFKFL--YDLE--LIAQ 330
+ + L+E + + Y++ + I++ + +D + +
Sbjct: 411 L--HKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPY 468
Query: 331 IDG 333
+D
Sbjct: 469 LDQ 471
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 712 | |||
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 100.0 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 100.0 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 100.0 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 100.0 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 100.0 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 100.0 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 100.0 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 100.0 | |
| 3i3n_A | 279 | Kelch-like protein 11; structural genomics, BTB, K | 100.0 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 100.0 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 100.0 | |
| 3hve_A | 256 | Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, dis | 100.0 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 100.0 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 100.0 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 100.0 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 100.0 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 100.0 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 100.0 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 100.0 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 100.0 | |
| 3htm_A | 172 | Speckle-type POZ protein; BTB, SPOP, ubiquitin, li | 99.96 | |
| 3hqi_A | 312 | Speckle-type POZ protein; SPOP, ubiquitin, puckere | 99.93 | |
| 4eoz_A | 145 | Speckle-type POZ protein; E3 ubiquitin ligase, nuc | 99.93 | |
| 2if5_A | 120 | Zinc finger and BTB domain-containing protein 7A; | 99.91 | |
| 2z8h_A | 138 | Transcription regulator protein BACH1; BTB, POZ, d | 99.91 | |
| 1r29_A | 127 | B-cell lymphoma 6 protein; BTB domain, transcripti | 99.91 | |
| 2yy9_A | 135 | Zinc finger and BTB domain-containing protein 48; | 99.91 | |
| 3b84_A | 119 | Zinc finger and BTB domain-containing protein 48; | 99.91 | |
| 2ppi_A | 144 | Gigaxonin; BTB domain, protein degradation, struct | 99.91 | |
| 1buo_A | 121 | POZ domain, protein (promyelocytic leukemia zinc f | 99.9 | |
| 2vpk_A | 116 | Myoneurin; transcription regulation, transcription | 99.9 | |
| 3ohu_A | 125 | Transcription regulator protein BACH2; BTB/POZ dom | 99.89 | |
| 3ga1_A | 129 | Nucleus accumbens-associated protein 1; BTB/POZ do | 99.89 | |
| 2q81_A | 119 | MIZ-1 protein; BTB/POZ domain, transcription; HET: | 99.89 | |
| 2ihc_A | 124 | Transcription regulator protein BACH1; BRIC-A-BRAC | 99.89 | |
| 2vkp_A | 109 | BTB/POZ domain-containing protein 6; protein-bindi | 99.88 | |
| 3fkc_A | 116 | Transcriptional regulator kaiso; zinc finger and B | 99.87 | |
| 3m5b_A | 119 | Zinc finger and BTB domain-containing protein 32; | 99.85 | |
| 2eqx_A | 105 | Kelch repeat and BTB domain-containing protein 4; | 99.7 | |
| 2ast_A | 159 | S-phase kinase-associated protein 1A; SCF-substrat | 99.55 | |
| 4ajy_C | 97 | Transcription elongation factor B polypeptide 1; E | 99.35 | |
| 1fs1_B | 141 | SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, le | 99.27 | |
| 2p1m_A | 160 | SKP1-like protein 1A; F-BOX, leucine rich repeat, | 99.16 | |
| 1hv2_A | 99 | Elongin C, ELC1; protein-peptide complex, signalin | 98.69 | |
| 3v7d_A | 169 | Suppressor of kinetochore protein 1; WD 40 domain, | 98.68 | |
| 2fnj_C | 96 | Transcription elongation factor B polypeptide 1; b | 98.63 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 98.58 | |
| 1vcb_B | 112 | Protein (elongin C); tumor suppressor, cancer, ubi | 98.29 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 98.23 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 98.22 | |
| 3drz_A | 107 | BTB/POZ domain-containing protein KCTD5; potassium | 98.19 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 98.18 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 98.05 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 98.04 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 97.87 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 97.77 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 97.72 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 97.62 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 97.61 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 97.61 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 97.52 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 97.47 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 97.41 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 97.4 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 97.37 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 97.35 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 97.35 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 97.33 | |
| 3drx_A | 202 | BTB/POZ domain-containing protein KCTD5; golgi, gr | 97.32 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 97.32 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 97.31 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 97.24 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 97.21 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 97.17 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 97.15 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 97.14 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 97.12 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 97.12 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 97.1 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 97.07 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 97.05 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 97.05 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 97.05 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 97.02 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 97.02 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 96.96 | |
| 3v9f_A | 781 | Two-component system sensor histidine kinase/RESP | 96.96 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 96.96 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 96.95 | |
| 3v9f_A | 781 | Two-component system sensor histidine kinase/RESP | 96.92 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 96.92 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 96.9 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 96.89 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 96.89 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 96.88 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 96.88 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 96.87 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 96.85 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 96.83 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 96.83 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 96.83 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 96.83 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 96.82 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 96.81 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 96.8 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 96.77 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 96.75 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 96.72 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 96.69 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 96.67 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 96.67 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 96.66 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 96.65 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 96.64 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 96.64 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 96.64 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 96.63 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 96.62 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 96.58 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 96.56 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 96.55 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 96.55 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 96.48 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 96.48 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 96.47 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 96.47 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 96.47 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 96.45 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 96.43 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 96.41 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 96.39 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 96.38 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 96.36 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 96.31 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 96.3 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 96.3 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 96.3 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 96.28 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 96.26 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 96.26 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 96.25 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 96.25 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 96.25 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 96.24 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 96.22 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 96.21 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 96.21 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 96.19 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 96.19 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 96.16 | |
| 3ott_A | 758 | Two-component system sensor histidine kinase; beta | 96.14 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 96.02 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 96.01 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 95.98 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 95.95 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 95.93 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 95.91 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 95.89 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 95.89 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 95.87 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 95.86 | |
| 2xbg_A | 327 | YCF48-like protein; photosynthesis, photosystem II | 95.76 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 95.76 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 95.75 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 95.74 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 95.72 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 95.69 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 95.68 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 95.68 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 95.67 | |
| 2xbg_A | 327 | YCF48-like protein; photosynthesis, photosystem II | 95.66 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 95.65 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 95.65 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 95.64 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 95.63 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 95.54 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 95.53 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 95.51 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 95.49 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 95.48 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 95.46 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 95.46 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 95.44 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 95.42 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 95.42 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 95.39 | |
| 1s1g_A | 124 | Potassium voltage-gated channel subfamily D membe; | 95.36 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 95.36 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 95.34 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 95.34 | |
| 3kvt_A | 115 | Potassium channel protein SHAW; tetramerization do | 95.32 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 95.28 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 95.27 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 95.27 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 95.26 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 95.24 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 95.22 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 95.19 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 95.17 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 95.16 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 95.16 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 95.16 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 95.13 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 95.09 | |
| 3b7f_A | 394 | Glycosyl hydrolase, BNR repeat; 7-bladed beta-prop | 95.07 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 95.0 | |
| 1pex_A | 207 | Collagenase-3, MMP-13; C-terminal hemopexin-like d | 94.99 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 94.98 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 94.96 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 94.92 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 94.81 | |
| 1nn7_A | 105 | Potassium channel KV4.2; teteramerization domain, | 94.8 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 94.73 | |
| 3b7f_A | 394 | Glycosyl hydrolase, BNR repeat; 7-bladed beta-prop | 94.72 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 94.7 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 94.68 | |
| 1qhu_A | 460 | Protein (hemopexin); beta propeller, HAEM binding | 94.65 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 94.63 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 94.6 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 94.59 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 94.57 | |
| 1pex_A | 207 | Collagenase-3, MMP-13; C-terminal hemopexin-like d | 94.55 | |
| 1t1d_A | 100 | Protein (potassium channel KV1.1); potassium chann | 94.53 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 94.45 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 94.39 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 94.37 | |
| 1qhu_A | 460 | Protein (hemopexin); beta propeller, HAEM binding | 94.22 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 94.21 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 94.16 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 94.15 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 94.11 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 94.1 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 94.08 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 94.06 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 94.06 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 94.05 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 94.04 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 94.01 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 94.0 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 93.96 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 93.94 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 93.9 | |
| 1itv_A | 195 | MMP9; adaptive molecular recognition, beta propell | 93.84 | |
| 2nz0_B | 140 | Potassium voltage-gated channel subfamily D membe; | 93.77 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 93.63 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 93.6 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 93.56 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 93.49 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 93.46 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 93.45 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 93.41 | |
| 3ott_A | 758 | Two-component system sensor histidine kinase; beta | 93.4 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 93.39 | |
| 1itv_A | 195 | MMP9; adaptive molecular recognition, beta propell | 93.38 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 93.06 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 93.01 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 92.97 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 92.71 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 92.69 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 92.51 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 92.51 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 92.48 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 92.44 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 91.94 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 91.78 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 91.76 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 91.75 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 91.6 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 91.59 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 91.56 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 91.56 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 91.56 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 91.54 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 91.45 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 91.41 | |
| 3oyo_A | 225 | Hemopexin fold protein CP4; seeds, plant protein; | 91.33 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 91.13 | |
| 3c7x_A | 196 | Matrix metalloproteinase-14; membrane protein inte | 90.95 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 90.94 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 90.86 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 90.73 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 89.94 | |
| 1su3_A | 450 | Interstitial collagenase; prodomain, hemopexin dom | 89.83 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 89.73 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 89.55 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 89.55 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 89.54 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 89.49 | |
| 1su3_A | 450 | Interstitial collagenase; prodomain, hemopexin dom | 89.47 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 89.46 | |
| 1gen_A | 218 | Gelatinase A; hydrolase, hemopexin domain, metallo | 89.23 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 89.18 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 88.97 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 88.6 | |
| 3ba0_A | 365 | Macrophage metalloelastase; FULL-length MMP-12, he | 88.31 | |
| 2eqx_A | 105 | Kelch repeat and BTB domain-containing protein 4; | 88.26 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 88.24 | |
| 1gen_A | 218 | Gelatinase A; hydrolase, hemopexin domain, metallo | 87.99 | |
| 3c7x_A | 196 | Matrix metalloproteinase-14; membrane protein inte | 87.98 | |
| 3oyo_A | 225 | Hemopexin fold protein CP4; seeds, plant protein; | 87.77 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 87.66 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 87.43 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 87.23 | |
| 3ba0_A | 365 | Macrophage metalloelastase; FULL-length MMP-12, he | 86.91 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 86.9 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 86.58 | |
| 3i3n_A | 279 | Kelch-like protein 11; structural genomics, BTB, K | 86.57 | |
| 2vkp_A | 109 | BTB/POZ domain-containing protein 6; protein-bindi | 86.41 | |
| 2p9w_A | 334 | MAL S 1 allergenic protein; beta propeller; 1.35A | 86.36 | |
| 3hve_A | 256 | Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, dis | 85.62 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 85.44 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 85.06 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 84.99 | |
| 3lp9_A | 227 | LS-24; SEED albumin, plant protein; HET: SPM; 2.20 | 84.89 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 84.5 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 84.22 | |
| 1hxn_A | 219 | Hemopexin, HPX; heme, binding protein; 1.80A {Oryc | 84.03 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 83.98 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 83.61 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 83.1 | |
| 1hxn_A | 219 | Hemopexin, HPX; heme, binding protein; 1.80A {Oryc | 80.96 | |
| 2yy9_A | 135 | Zinc finger and BTB domain-containing protein 48; | 80.68 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 80.31 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 80.29 |
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-49 Score=409.28 Aligned_cols=292 Identities=30% Similarity=0.588 Sum_probs=264.5
Q ss_pred cccCcCC---CceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEECCEEEEEeecCCCCccceEEE
Q psy14726 340 IARPRVP---HEILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRC 416 (712)
Q Consensus 340 ~~~pr~~---~~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~ 416 (712)
+++||.. .+.||++||... ...+++++||+.+++|..+ .++|.+|..|++++++++||++||..+....+++++
T Consensus 5 ~~~~r~~~~~~~~i~v~GG~~~-~~~~~~~~~d~~~~~W~~~--~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~ 81 (302)
T 2xn4_A 5 RTRLRTPMNLPKLMVVVGGQAP-KAIRSVECYDFKEERWHQV--AELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDS 81 (302)
T ss_dssp ----------CEEEEEECCBSS-SBCCCEEEEETTTTEEEEE--CCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEE
T ss_pred cccCCcccCCCCEEEEECCCCC-CCCCcEEEEcCcCCcEeEc--ccCCcccccceEEEECCEEEEEeCcCCCccccceEE
Confidence 4456654 568999999764 4567899999999999995 578889999999999999999999987777899999
Q ss_pred EECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEECCEEEEE
Q psy14726 417 FNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYIT 496 (712)
Q Consensus 417 yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~ 496 (712)
||+.+++|..++++|.+|..|++++++++||++||.++...++++++||+.+++|+.++++|.+|..|++++++++||++
T Consensus 82 ~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~ 161 (302)
T 2xn4_A 82 YDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAV 161 (302)
T ss_dssp EETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEE
T ss_pred ECCCCCceeeCCCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEE
Confidence 99999999999999999999999999999999999987777899999999999999999999999999999999999999
Q ss_pred cccCCC--CccCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCC
Q psy14726 497 GGFNGH--NCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNP 574 (712)
Q Consensus 497 GG~~~~--~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~ 574 (712)
||.++. ..++++++||+.+++|+.++++|.+|..|++++++++||++||.++....+++++||+.+++|+.++++|.+
T Consensus 162 GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~ 241 (302)
T 2xn4_A 162 GGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMC 241 (302)
T ss_dssp CCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSC
T ss_pred eCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCc
Confidence 998754 358899999999999999999999999999999999999999988777788999999999999999999999
Q ss_pred ccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeEEEcc-CCCCcccceEEEEEcCcc
Q psy14726 575 RSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEAT-DMNIYRSALSACVIMGLP 634 (712)
Q Consensus 575 r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~-~~p~~r~~~~~~~~~~~~ 634 (712)
|..|+++.++++||++||.++....+++++||+++++|+.++ .||.+|..|+++++++++
T Consensus 242 r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~i 302 (302)
T 2xn4_A 242 RRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVSSCMSTGRSYAGVTVIDKRL 302 (302)
T ss_dssp CBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECSSCCSSCCBSCEEEEEEC--
T ss_pred cccCeEEEECCEEEEECCcCCCcccccEEEEcCCCCeEEECCcccCcccccceEEEecccC
Confidence 999999999999999999988777889999999999999997 899999999999998754
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-48 Score=406.20 Aligned_cols=283 Identities=35% Similarity=0.683 Sum_probs=264.8
Q ss_pred CCCceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEECCEEEEEeec----CCCCccceEEEEECC
Q psy14726 345 VPHEILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGF----DGNEYYNSCRCFNAV 420 (712)
Q Consensus 345 ~~~~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~----~~~~~~~~v~~yd~~ 420 (712)
...+.||++||. .....+++++||+.+++|..+ .++|.+|.+|++++++++||++||. .+....+++++||+.
T Consensus 22 ~~~~~i~v~GG~-~~~~~~~~~~~d~~~~~W~~~--~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~ 98 (308)
T 1zgk_A 22 KVGRLIYTAGGY-FRQSLSYLEAYNPSNGTWLRL--ADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPM 98 (308)
T ss_dssp CCCCCEEEECCB-SSSBCCCEEEEETTTTEEEEC--CCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETT
T ss_pred CCCCEEEEEeCc-CCCCcceEEEEcCCCCeEeEC--CCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCC
Confidence 345789999998 556778899999999999995 5788899999999999999999998 555667899999999
Q ss_pred CCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEECCEEEEEcccC
Q psy14726 421 TKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFN 500 (712)
Q Consensus 421 ~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 500 (712)
+++|+.++++|.+|..|++++++++||++||..+...++++++||+.+++|+.++++|.+|.+|++++++++||++||.+
T Consensus 99 ~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 178 (308)
T 1zgk_A 99 TNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFD 178 (308)
T ss_dssp TTEEEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBC
T ss_pred CCeEeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeCCC
Confidence 99999999999999999999999999999999877778999999999999999999999999999999999999999998
Q ss_pred CCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEE
Q psy14726 501 GHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAI 580 (712)
Q Consensus 501 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~ 580 (712)
+...++++++||+.+++|+.++++|.+|..|++++++++||++||.++....+++++||+.+++|+.++++|.+|..|++
T Consensus 179 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~ 258 (308)
T 1zgk_A 179 GTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGI 258 (308)
T ss_dssp SSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEE
T ss_pred CCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEE
Confidence 77778999999999999999999999999999999999999999988777789999999999999999999999999999
Q ss_pred EEECCEEEEEcccCCCceeeeEEEEECCCCeEEEccCCCCcccceEEEEE
Q psy14726 581 EVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACVI 630 (712)
Q Consensus 581 ~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 630 (712)
++++++||++||.++....+++++||+++++|+.+++||.+|..|+++++
T Consensus 259 ~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~l 308 (308)
T 1zgk_A 259 TVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTRMTSGRSGVGVAVT 308 (308)
T ss_dssp EEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEC
T ss_pred EEECCEEEEEcCcCCCcccceEEEEcCCCCEEeecCCCCCCcccceeEeC
Confidence 99999999999998877788999999999999999999999999998864
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-48 Score=407.00 Aligned_cols=287 Identities=24% Similarity=0.451 Sum_probs=262.5
Q ss_pred ccCcCC-CceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEECCEEEEEeecCCCCccceEEEEEC
Q psy14726 341 ARPRVP-HEILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNA 419 (712)
Q Consensus 341 ~~pr~~-~~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~ 419 (712)
++||.+ .+.||++||... .+++++||+.+++|..+ .++|.+|.+|++++++++||++||.. ....+++++||+
T Consensus 4 ~~pr~~~~~~l~~~GG~~~---~~~~~~~d~~~~~W~~~--~~~p~~r~~~~~~~~~~~lyv~GG~~-~~~~~~~~~~d~ 77 (306)
T 3ii7_A 4 TRPRRKKHDYRIALFGGSQ---PQSCRYFNPKDYSWTDI--RCPFEKRRDAACVFWDNVVYILGGSQ-LFPIKRMDCYNV 77 (306)
T ss_dssp ------CCCEEEEEECCSS---TTSEEEEETTTTEEEEC--CCCSCCCBSCEEEEETTEEEEECCBS-SSBCCEEEEEET
T ss_pred ccCCccccceEEEEeCCCC---CceEEEecCCCCCEecC--CCCCcccceeEEEEECCEEEEEeCCC-CCCcceEEEEeC
Confidence 456654 478999999755 67899999999999994 57788999999999999999999987 667899999999
Q ss_pred CCCcEEEeCCCCCCcceeEEEEECCeEEEEcccC-CCCCCceeEEeecCCCceEEcccCCccccceeEEEECCEEEEEcc
Q psy14726 420 VTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYN-GQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGG 498 (712)
Q Consensus 420 ~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~-~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG 498 (712)
.+++|..++++|.+|..|++++++++||++||.+ +...++++++||+.+++|+.++++|.+|..|++++++++||++||
T Consensus 78 ~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG 157 (306)
T 3ii7_A 78 VKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGG 157 (306)
T ss_dssp TTTEEEEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECC
T ss_pred CCCeEEECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECC
Confidence 9999999999999999999999999999999987 556789999999999999999999999999999999999999999
Q ss_pred cCCCCc----cCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCC
Q psy14726 499 FNGHNC----LNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNP 574 (712)
Q Consensus 499 ~~~~~~----~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~ 574 (712)
.++... ++++++||+.+++|+.++++|.+|..|++++++++||++||.++....+++++||+.+++|+.++++|.+
T Consensus 158 ~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~ 237 (306)
T 3ii7_A 158 SLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWK 237 (306)
T ss_dssp EESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCC
T ss_pred CCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCC
Confidence 876544 8999999999999999999999999999999999999999987777788999999999999999999999
Q ss_pred ccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeEEEccCCCCcccceEEEEEcCc
Q psy14726 575 RSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACVIMGL 633 (712)
Q Consensus 575 r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~ 633 (712)
|..|++++++++||++||.++....+++++||+++++|+.++++|.+|.+|+++++.+.
T Consensus 238 r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~ 296 (306)
T 3ii7_A 238 GVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETDKWVANSKVRAFPVTSCLICVVDT 296 (306)
T ss_dssp BSCCEEEEETTEEEEEECBCSSSBCCEEEEEETTTTEEEEEEEEECCSCTTCEEEEEEC
T ss_pred ccceeEEEECCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCCcccccceeEEEEECCc
Confidence 99999999999999999998877888999999999999999999999999999888653
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-48 Score=404.83 Aligned_cols=290 Identities=36% Similarity=0.714 Sum_probs=265.9
Q ss_pred cccCcCC-CceEEEEee-cCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEECCEEEEEeecCCCCccceEEEE
Q psy14726 340 IARPRVP-HEILFAIGG-WSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCF 417 (712)
Q Consensus 340 ~~~pr~~-~~~i~~~GG-~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~y 417 (712)
+++||.. .+.|+++|| .......+++++||+.+++|..+ .++|.+|.+|++++++++||++||..+....+++++|
T Consensus 6 ~~~pr~~~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~--~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~ 83 (301)
T 2vpj_A 6 RTRARLGANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFL--PSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECL 83 (301)
T ss_dssp -------CCEEEEEECCEETTTEECCCEEEEETTTTEEEEC--CCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEE
T ss_pred cccccccCCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeC--CCCChhhccccEEEECCEEEEEcCCCCCccCceEEEE
Confidence 4567754 468999999 55566778899999999999995 4678899999999999999999999877778999999
Q ss_pred ECCCCc---EEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEECCEEE
Q psy14726 418 NAVTKV---WKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIY 494 (712)
Q Consensus 418 d~~~~~---W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iy 494 (712)
|+.+++ |+.++++|.+|..|++++++++||++||..+...++++++||+.+++|+.++++|.+|..|++++++++||
T Consensus 84 d~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iy 163 (301)
T 2vpj_A 84 DYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIY 163 (301)
T ss_dssp ETTCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEE
T ss_pred ECCCCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEE
Confidence 999999 99999999999999999999999999999877778999999999999999999999999999999999999
Q ss_pred EEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCC
Q psy14726 495 ITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNP 574 (712)
Q Consensus 495 v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~ 574 (712)
++||.++...++++++||+.+++|+.++++|.+|..|++++++++||++||.++....+++++||+.+++|+.++++|.+
T Consensus 164 v~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~ 243 (301)
T 2vpj_A 164 CLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTP 243 (301)
T ss_dssp EECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSC
T ss_pred EECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCc
Confidence 99999887788999999999999999999999999999999999999999988777789999999999999999999999
Q ss_pred ccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeEEEccCCCCcccceEEEEEc
Q psy14726 575 RSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACVIM 631 (712)
Q Consensus 575 r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~ 631 (712)
|..|+++.++++||++||.++....+++++||+++++|+.+++||.+|+.|+++++.
T Consensus 244 r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~ 300 (301)
T 2vpj_A 244 RCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVTSMGTQRCDAGVCVLR 300 (301)
T ss_dssp CBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTTEEEEEEEEEEEEESCEEEEEE
T ss_pred ccceeEEEECCEEEEEcCcCCCcccccEEEEcCCCCeEEEcCCCCcccccceEEEeC
Confidence 999999999999999999988777889999999999999999999999999999874
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-47 Score=396.43 Aligned_cols=280 Identities=22% Similarity=0.392 Sum_probs=254.1
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEECCEEEEEeecC----C--CCccceEEEEECCC
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFD----G--NEYYNSCRCFNAVT 421 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~----~--~~~~~~v~~yd~~~ 421 (712)
+.|+++|| +++++||+.+++|.. +..+.|.+|.+|++++++++||++||.. + ....+++++||+.+
T Consensus 5 ~~l~~~GG-------~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~ 76 (315)
T 4asc_A 5 DLIFMISE-------EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLD 76 (315)
T ss_dssp EEEEEEET-------TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTT
T ss_pred eEEEEEcC-------CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCC
Confidence 57889999 579999999999987 3444567899999999999999999962 1 22346699999999
Q ss_pred CcEEEeCCCCCCcceeEEEEECCeEEEEcccC---CCCCCceeEEeecCCCceEEcccCCccccceeEEEECCEEEEEcc
Q psy14726 422 KVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYN---GQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGG 498 (712)
Q Consensus 422 ~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~---~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG 498 (712)
++|+.++++|.+|..|++++++++||++||.+ +....+++++||+.+++|+.++++|.+|.+|++++++++|||+||
T Consensus 77 ~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG 156 (315)
T 4asc_A 77 SEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGG 156 (315)
T ss_dssp TEEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECC
T ss_pred CeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeC
Confidence 99999999999999999999999999999975 356789999999999999999999999999999999999999999
Q ss_pred c-CCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccc
Q psy14726 499 F-NGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSN 577 (712)
Q Consensus 499 ~-~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~ 577 (712)
. .+...++++++||+.+++|+.++++|.+|..|++++++++||++||.++....+++++||+.+++|+.++++|.+|..
T Consensus 157 ~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~ 236 (315)
T 4asc_A 157 KGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSS 236 (315)
T ss_dssp BCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBS
T ss_pred CCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccc
Confidence 8 556778999999999999999999999999999999999999999988777788999999999999999999999999
Q ss_pred eEEEEECCEEEEEcccCCC---------ceeeeEEEEECCCCeEEEccCCCCcccceEEEEEcCcceeE
Q psy14726 578 FAIEVIDDMIFAIGGFNGV---------TTIYHVECYDEKTDEWYEATDMNIYRSALSACVIMGLPNVY 637 (712)
Q Consensus 578 ~~~~~~~~~i~v~GG~~~~---------~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~~~v~ 637 (712)
|+++.++++||++||.++. ...+++++||+++++|+.+ +|.+|..++++++++++|++
T Consensus 237 ~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~--~~~~r~~~~~~~~~~~l~v~ 303 (315)
T 4asc_A 237 LSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV--LREIAYAAGATFLPVRLNVL 303 (315)
T ss_dssp CEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE--ESCSSCCSSCEEEEEEECGG
T ss_pred eeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhh--ccCCcCccceEEeCCEEEEE
Confidence 9999999999999998532 3567899999999999999 67789999999999999987
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-46 Score=391.55 Aligned_cols=286 Identities=21% Similarity=0.390 Sum_probs=255.9
Q ss_pred cCcCC---CceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEECCEEEEEeecCC------CCccc
Q psy14726 342 RPRVP---HEILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDG------NEYYN 412 (712)
Q Consensus 342 ~pr~~---~~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~------~~~~~ 412 (712)
+||.+ .+.|+++||. .+++||+.+++|... ..+.+.+|.+|++++.+++||++||... ....+
T Consensus 7 ~~r~~~~~~~~i~~~GG~-------~~~~yd~~~~~W~~~-~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~ 78 (318)
T 2woz_A 7 IPRHGMFVKDLILLVNDT-------AAVAYDPMENECYLT-ALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQS 78 (318)
T ss_dssp SCCCCCSEEEEEEEECSS-------EEEEEETTTTEEEEE-EECTTSCSSEEEEECSSSCEEEEESSCC-------CCCB
T ss_pred cccccceecchhhhcccc-------ceEEECCCCCceecc-cCCccCCccceEEEEECCEEEEECCcccCccccCCCccc
Confidence 46665 4689999993 489999999999983 3345578999999999999999999531 12345
Q ss_pred eEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccC--CCCCCceeEEeecCCCceEEcccCCccccceeEEEEC
Q psy14726 413 SCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYN--GQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQ 490 (712)
Q Consensus 413 ~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~--~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~ 490 (712)
++++||+.+++|..++++|.+|..|++++++++||++||.. +...++++++||+.+++|+.++++|.+|.+|++++++
T Consensus 79 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~ 158 (318)
T 2woz_A 79 YFFQLDNVSSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHN 158 (318)
T ss_dssp EEEEEETTTTEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEET
T ss_pred cEEEEeCCCCcEEECCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEEC
Confidence 69999999999999999999999999999999999999986 4456789999999999999999999999999999999
Q ss_pred CEEEEEcccC-CCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcC
Q psy14726 491 GKIYITGGFN-GHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVP 569 (712)
Q Consensus 491 ~~iyv~GG~~-~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 569 (712)
++|||+||.+ +...++++++||+.+++|+.++++|.+|..|++++++++||++||.++....+++++||+.+++|+.++
T Consensus 159 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 238 (318)
T 2woz_A 159 GMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMT 238 (318)
T ss_dssp TEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECC
T ss_pred CEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECC
Confidence 9999999984 345689999999999999999999999999999999999999999877666789999999999999999
Q ss_pred CCCCCccceEEEEECCEEEEEcccCCC---------ceeeeEEEEECCCCeEEEccCCCCcccceEEEEEcCcceeE
Q psy14726 570 DMYNPRSNFAIEVIDDMIFAIGGFNGV---------TTIYHVECYDEKTDEWYEATDMNIYRSALSACVIMGLPNVY 637 (712)
Q Consensus 570 ~~p~~r~~~~~~~~~~~i~v~GG~~~~---------~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~~~v~ 637 (712)
++|.+|..|+++.++++||++||.+.. ...+++++||+++++|+.+ +|.+|+.|+++++++++|++
T Consensus 239 ~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~--~~~~r~~~~~~~~~~~iyi~ 313 (318)
T 2woz_A 239 EFPQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM--LKEIRYASGASCLATRLNLF 313 (318)
T ss_dssp CCSSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE--ESCCGGGTTCEEEEEEEEGG
T ss_pred CCCCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh--cccccccccceeeCCEEEEE
Confidence 999999999999999999999998752 3467899999999999999 88999999999999999986
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-45 Score=384.46 Aligned_cols=293 Identities=29% Similarity=0.496 Sum_probs=255.5
Q ss_pred CCCCCCcceEEEEECCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEccc----CCCCC
Q psy14726 382 DPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGY----NGQRR 457 (712)
Q Consensus 382 ~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~----~~~~~ 457 (712)
+.+.+|..|+++.+++.||++||. .....+++++||+.+++|..++++|.+|..|++++++++||++||. .+...
T Consensus 10 ~~~~~~~~~~~~~~~~~i~v~GG~-~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~ 88 (308)
T 1zgk_A 10 SSGLVPRGSHAPKVGRLIYTAGGY-FRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTD 88 (308)
T ss_dssp -----------CCCCCCEEEECCB-SSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEE
T ss_pred cCCeeeCCccccCCCCEEEEEeCc-CCCCcceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCee
Confidence 456689999999999999999998 4567889999999999999999999999999999999999999998 44556
Q ss_pred CceeEEeecCCCceEEcccCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEEC
Q psy14726 458 QNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYH 537 (712)
Q Consensus 458 ~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~ 537 (712)
.+++++||+.+++|+.++++|.+|..|++++++++|||+||.++...++++++||+.+++|+.++++|.+|..|++++++
T Consensus 89 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~ 168 (308)
T 1zgk_A 89 SSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLN 168 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEET
T ss_pred cceEEEECCCCCeEeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEEC
Confidence 78999999999999999999999999999999999999999987777899999999999999999999999999999999
Q ss_pred CEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeEEEccC
Q psy14726 538 ECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATD 617 (712)
Q Consensus 538 ~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 617 (712)
++||++||.++....+++++||+.+++|+.++++|.+|..|+++.++++||++||.++....+++++||+.+++|+.+++
T Consensus 169 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 248 (308)
T 1zgk_A 169 RLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAP 248 (308)
T ss_dssp TEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCC
T ss_pred CEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCC
Confidence 99999999887777899999999999999999999999999999999999999999887778899999999999999999
Q ss_pred CCCcccceEEEEEcCcceeEeccccccchhhHHhhhhhhcccccccccccccCCcccccccCccCCCCccccccc
Q psy14726 618 MNIYRSALSACVIMGLPNVYDYIHQHRDSLMEEKRQKLLAIEGRQRQNQSEEGNSSQQSVLPSSNSNVSSSDGVM 692 (712)
Q Consensus 618 ~p~~r~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~w~~~p~~~~~~~~~~~~~ 692 (712)
+|.+|..++++++++++|++++..... ....++ .|++..++|+.++ .|+..|...+.+
T Consensus 249 ~p~~r~~~~~~~~~~~i~v~GG~~~~~---------~~~~v~-------~yd~~~~~W~~~~-~~p~~r~~~~~~ 306 (308)
T 1zgk_A 249 MKHRRSALGITVHQGRIYVLGGYDGHT---------FLDSVE-------CYDPDTDTWSEVT-RMTSGRSGVGVA 306 (308)
T ss_dssp CSSCCBSCEEEEETTEEEEECCBCSSC---------BCCEEE-------EEETTTTEEEEEE-ECSSCCBSCEEE
T ss_pred CCCCccceEEEEECCEEEEEcCcCCCc---------ccceEE-------EEcCCCCEEeecC-CCCCCcccceeE
Confidence 999999999999999999996643211 111222 4999999999985 577777776654
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-45 Score=377.61 Aligned_cols=283 Identities=29% Similarity=0.548 Sum_probs=255.0
Q ss_pred EEECCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceE
Q psy14726 393 AVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWS 472 (712)
Q Consensus 393 ~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 472 (712)
+.+++.||++||.+. ...+++++||+.+++|..++++|.+|..|++++++++||++||.++....+++++||+.+++|+
T Consensus 12 ~~~~~~i~v~GG~~~-~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~ 90 (302)
T 2xn4_A 12 MNLPKLMVVVGGQAP-KAIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWT 90 (302)
T ss_dssp ---CEEEEEECCBSS-SBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEE
T ss_pred cCCCCEEEEECCCCC-CCCCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCcee
Confidence 345789999999864 4578899999999999999999999999999999999999999987777899999999999999
Q ss_pred EcccCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCC--
Q psy14726 473 LIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMS-- 550 (712)
Q Consensus 473 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-- 550 (712)
.++++|.+|..|++++++++|||+||.++...++++++||+.+++|+.++++|.+|..|++++++++||++||.++..
T Consensus 91 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~ 170 (302)
T 2xn4_A 91 SVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQ 170 (302)
T ss_dssp EECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTE
T ss_pred eCCCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCc
Confidence 999999999999999999999999999887788999999999999999999999999999999999999999976543
Q ss_pred ccceEEEEeCCCCcEEEcCCCCCCccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeEEEccCCCCcccceEEEEE
Q psy14726 551 RMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACVI 630 (712)
Q Consensus 551 ~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 630 (712)
..+++++||+.+++|+.++++|.+|..|++++++++||++||.++....+++++||+++++|+.++++|.+|..++++++
T Consensus 171 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~ 250 (302)
T 2xn4_A 171 CLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAV 250 (302)
T ss_dssp ECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE
T ss_pred cccEEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEE
Confidence 47899999999999999999999999999999999999999998877778999999999999999999999999999999
Q ss_pred cCcceeEeccccccchhhHHhhhhhhcccccccccccccCCcccccccCccCCCCccccccc
Q psy14726 631 MGLPNVYDYIHQHRDSLMEEKRQKLLAIEGRQRQNQSEEGNSSQQSVLPSSNSNVSSSDGVM 692 (712)
Q Consensus 631 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~w~~~p~~~~~~~~~~~~~ 692 (712)
++.+|++++..... ....++ .||+..++|+.+|..|+..|.+++++
T Consensus 251 ~~~i~v~GG~~~~~---------~~~~v~-------~yd~~~~~W~~~~~~~~~~r~~~~~~ 296 (302)
T 2xn4_A 251 NGLLYVVGGDDGSC---------NLASVE-------YYNPTTDKWTVVSSCMSTGRSYAGVT 296 (302)
T ss_dssp TTEEEEECCBCSSS---------BCCCEE-------EEETTTTEEEECSSCCSSCCBSCEEE
T ss_pred CCEEEEECCcCCCc---------ccccEE-------EEcCCCCeEEECCcccCcccccceEE
Confidence 99999996653221 112223 49999999999998899999887765
|
| >3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-45 Score=374.81 Aligned_cols=250 Identities=23% Similarity=0.447 Sum_probs=233.4
Q ss_pred CchhHHHHHHHHHHHHhcCCCccEEEEec--CCcEEeceeeeecccCHHHHHhhcCCCCcCCccceEEcC------CCCH
Q psy14726 72 DRAMSVQAMQALNEFREKNLLCDATIVLA--DNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIP------GVDA 143 (712)
Q Consensus 72 ~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~--~~~~~~~Hk~vL~~~S~yF~~mf~~~~~e~~~~~~i~l~------~~~~ 143 (712)
...|+..+++.|+++++++.+|||+|+|+ +|++|+|||.||+++|+||++||++++.|+.+ .+|.|+ ++++
T Consensus 12 ~~~h~~~ll~~l~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~-~~i~l~~~~~~~~v~~ 90 (279)
T 3i3n_A 12 CSSHCSELSWRQNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESRS-GRVEMRKWSSEPGPEP 90 (279)
T ss_dssp CTTHHHHHHHHHHHHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC---------EEECCCCSSTTCSCH
T ss_pred CHhHHHHHHHHHHHHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccccC-CeEEeccccccCCCCH
Confidence 34688999999999999999999999993 29999999999999999999999999999998 999998 8999
Q ss_pred HHHHHHhhhhccCceecChhhHHHHHHHhhhcChHHHHHHHHHhhcccCChhhHHHHHHHHHHcccHHHHHHHHHHHHHH
Q psy14726 144 SVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLTTPRNCFGILLFSRDHFCKKLEEWTRKYILRN 223 (712)
Q Consensus 144 ~~f~~~l~~~Yt~~~~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~ 223 (712)
++|+.+|+|||||++.++.+++.+++.+|++|+++.|++.|+++|.+.++.+||+.++.+|+.+++.+|.+.|.+||.+|
T Consensus 91 ~~f~~ll~~~Ytg~~~i~~~~v~~ll~~A~~l~i~~L~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~ 170 (279)
T 3i3n_A 91 DTVEAVIEYMYTGRIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAHMYTLSQLALKAADMIRRN 170 (279)
T ss_dssp HHHHHHHHHHHHSEEEEETTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhhCcCCcccCHHHHHHHHHHHHHHCcHHHHHHHHHHHHHcCCcchHHHHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCccccccCCHHHHHhhccCCCCCCCChhHHHHHHHHHHhcChhhHHHHHHHhhhcccCCCCCHHHHHHhhccCC
Q psy14726 224 FVDVARESEEIVFISEQELEEIISSDELNVKSEETVWELIIRWIDYDPENRKKHIVSLMKNIRLGLLETEFFREKVKHHP 303 (712)
Q Consensus 224 f~~l~~~~~~f~~l~~~~l~~ll~~d~L~v~~E~~v~~~v~~W~~~~~~~r~~~~~~ll~~vr~~~l~~~~l~~~v~~~~ 303 (712)
|.++. .+++|.+|+.+.+..||++|.|++.+|.+||+++++|++++++.|.+++.+||++|||++|++++|.+.+.+.+
T Consensus 171 f~~v~-~~~~f~~L~~~~l~~lL~~d~L~v~sE~~vf~av~~W~~~~~~~r~~~~~~ll~~VRf~l~~~~~L~~~v~~~~ 249 (279)
T 3i3n_A 171 FHKVI-QDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRNAEERERYFEELFKLLRLSQMKPTYLTRHVKPER 249 (279)
T ss_dssp HHHHT-TSSGGGGSCHHHHHHHHTCSSCCCSCHHHHHHHHHHHHHTTHHHHTTTHHHHHTTSCGGGSCHHHHHHTTTTSH
T ss_pred HHHHh-cCcChhcCCHHHHHHHhcCcCCCCCCHHHHHHHHHHHHHcCHHHHHHHHHHHHHhcCCCCCCHHHHHHHhhccc
Confidence 99999 78899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCchhhHHHHhhhhcc
Q psy14726 304 YVQSTPECRPIIIETFKFLY 323 (712)
Q Consensus 304 ~~~~~~~~~~~~~ea~~~~~ 323 (712)
++..++.|++++.+|++||.
T Consensus 250 l~~~~~~c~~~l~ea~~~~~ 269 (279)
T 3i3n_A 250 LVANNEVCVKLVADAVERHA 269 (279)
T ss_dssp HHHTCHHHHHHHHHHHHHHH
T ss_pred hhcCCHHHHHHHHHHHHhcc
Confidence 99999999999999999984
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-43 Score=368.41 Aligned_cols=276 Identities=24% Similarity=0.369 Sum_probs=248.0
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA 475 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 475 (712)
.+.||++||... .+++++||+.+++|..++++|.+|.+|++++++++||++||.+ ....+++++||+.+++|+.++
T Consensus 11 ~~~l~~~GG~~~---~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~-~~~~~~~~~~d~~~~~W~~~~ 86 (306)
T 3ii7_A 11 HDYRIALFGGSQ---PQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQ-LFPIKRMDCYNVVKDSWYSKL 86 (306)
T ss_dssp CCEEEEEECCSS---TTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBS-SSBCCEEEEEETTTTEEEEEE
T ss_pred cceEEEEeCCCC---CceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCC-CCCcceEEEEeCCCCeEEECC
Confidence 478999999755 6889999999999999999999999999999999999999988 667899999999999999999
Q ss_pred cCCccccceeEEEECCEEEEEcccC-CCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCc---
Q psy14726 476 PMNVERSDASATTLQGKIYITGGFN-GHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSR--- 551 (712)
Q Consensus 476 ~~p~~r~~~~~~~~~~~iyv~GG~~-~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~--- 551 (712)
++|.+|.+|++++++++|||+||.+ +...++++++||+.+++|+.++++|.+|..|++++++++||++||.++...
T Consensus 87 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~ 166 (306)
T 3ii7_A 87 GPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGR 166 (306)
T ss_dssp CCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCE
T ss_pred CCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCccc
Confidence 9999999999999999999999987 567789999999999999999999999999999999999999999766554
Q ss_pred -cceEEEEeCCCCcEEEcCCCCCCccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeEEEccCCCCcccceEEEEE
Q psy14726 552 -MCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACVI 630 (712)
Q Consensus 552 -~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 630 (712)
.+++++||+.+++|+.++++|.+|..|+++.++++||++||.++....+++++||+.+++|+.++++|.+|..++++++
T Consensus 167 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 246 (306)
T 3ii7_A 167 VLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV 246 (306)
T ss_dssp ECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE
T ss_pred ccceEEEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE
Confidence 7899999999999999999999999999999999999999998877788999999999999999999999999999999
Q ss_pred cCcceeEeccccccchhhHHhhhhhhcccccccccccccCCcccccccCccCCCCccccccc
Q psy14726 631 MGLPNVYDYIHQHRDSLMEEKRQKLLAIEGRQRQNQSEEGNSSQQSVLPSSNSNVSSSDGVM 692 (712)
Q Consensus 631 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~w~~~p~~~~~~~~~~~~~ 692 (712)
++.+|++++...... ...+ ..|++..++|+.++ .++..|..++++
T Consensus 247 ~~~i~v~GG~~~~~~---------~~~~-------~~yd~~~~~W~~~~-~~~~~r~~~~~~ 291 (306)
T 3ii7_A 247 GSIVYVLAGFQGVGR---------LGHI-------LEYNTETDKWVANS-KVRAFPVTSCLI 291 (306)
T ss_dssp TTEEEEEECBCSSSB---------CCEE-------EEEETTTTEEEEEE-EEECCSCTTCEE
T ss_pred CCEEEEEeCcCCCee---------eeeE-------EEEcCCCCeEEeCC-CcccccceeEEE
Confidence 999999977542211 1112 24999999999986 455666665443
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-43 Score=366.76 Aligned_cols=280 Identities=33% Similarity=0.585 Sum_probs=252.7
Q ss_pred ECCEEEEEee-cCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCc---
Q psy14726 395 IGYNIYVIGG-FDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQ--- 470 (712)
Q Consensus 395 ~~~~lyv~GG-~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--- 470 (712)
+++.||++|| .......+++++||+.+++|..++++|.+|..|+++..+++||++||..+....+++++||+.+++
T Consensus 13 ~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~ 92 (301)
T 2vpj_A 13 ANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGV 92 (301)
T ss_dssp CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCC
T ss_pred CCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCe
Confidence 5789999999 555667889999999999999999999999999999999999999999877778999999999999
Q ss_pred eEEcccCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCC
Q psy14726 471 WSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMS 550 (712)
Q Consensus 471 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~ 550 (712)
|+.++++|.+|..|++++++++|||+||.++...++++++||+.+++|+.++++|.+|..|++++++++||++||.++..
T Consensus 93 W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~ 172 (301)
T 2vpj_A 93 WYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLN 172 (301)
T ss_dssp CEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBCSSC
T ss_pred eEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCCCCc
Confidence 99999999999999999999999999999887778999999999999999999999999999999999999999988777
Q ss_pred ccceEEEEeCCCCcEEEcCCCCCCccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeEEEccCCCCcccceEEEEE
Q psy14726 551 RMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACVI 630 (712)
Q Consensus 551 ~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 630 (712)
..+++++||+.+++|+.++++|.+|..|+++.++++||++||.++....+++++||+++++|+.++++|.+|..|+++++
T Consensus 173 ~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 252 (301)
T 2vpj_A 173 ILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL 252 (301)
T ss_dssp BCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE
T ss_pred ccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE
Confidence 78999999999999999999999999999999999999999998877788999999999999999999999999999999
Q ss_pred cCcceeEeccccccchhhHHhhhhhhcccccccccccccCCcccccccCccCCCCcccccc
Q psy14726 631 MGLPNVYDYIHQHRDSLMEEKRQKLLAIEGRQRQNQSEEGNSSQQSVLPSSNSNVSSSDGV 691 (712)
Q Consensus 631 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~w~~~p~~~~~~~~~~~~ 691 (712)
++++|++++..... ....++ .|++..++|+.++ .|+..|...+.
T Consensus 253 ~~~i~v~GG~~~~~---------~~~~v~-------~yd~~~~~W~~~~-~~~~~r~~~~~ 296 (301)
T 2vpj_A 253 RGRLYAIAGYDGNS---------LLSSIE-------CYDPIIDSWEVVT-SMGTQRCDAGV 296 (301)
T ss_dssp TTEEEEECCBCSSS---------BEEEEE-------EEETTTTEEEEEE-EEEEEEESCEE
T ss_pred CCEEEEEcCcCCCc---------ccccEE-------EEcCCCCeEEEcC-CCCcccccceE
Confidence 99999996643221 111223 3899999999986 45666655543
|
| >3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-45 Score=366.91 Aligned_cols=243 Identities=31% Similarity=0.605 Sum_probs=209.1
Q ss_pred CCchhHHHHHHHHHHHHhcCCCccEEEEecCCcEEeceeeeecccCHHHHHhhcCCCC--cCCccceEEcCCCCHHHHHH
Q psy14726 71 IDRAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLH--DQEKFSLVEIPGVDASVMTS 148 (712)
Q Consensus 71 ~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~--e~~~~~~i~l~~~~~~~f~~ 148 (712)
.+..|+..+++.|+++++++.+|||+|.| +|++|+|||.||+++|+||++||++++. |+.. ..|.++++++++|+.
T Consensus 10 ~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~-~~i~l~~v~~~~f~~ 87 (256)
T 3hve_A 10 SDPQHAARLLRALSSFREESRFCDAHLVL-DGEEIPVQKNILAAASPYIRTKLNYNPPKDDGST-YKIELEGISVMVMRE 87 (256)
T ss_dssp CCTTTHHHHHHHHHTCCC--CCCCEEEEE-TTEEEEECHHHHHTTCHHHHHTC------------CEEECSSCCHHHHHH
T ss_pred CChHHHHHHHHHHHHHHhcCCCcceEEEE-CCEEEechHHHHHHcCHHHHHHhCCCCCcccCCC-CeEEeCCCCHHHHHH
Confidence 34478899999999999999999999999 9999999999999999999999999887 5666 899999999999999
Q ss_pred HhhhhccCceecChhhHHHHHHHhhhcChHHHHHHHHHhhcccCChhhHHHHHHHHHHcccHHHHHHHHHHHHHHHHHhh
Q psy14726 149 LIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDVA 228 (712)
Q Consensus 149 ~l~~~Yt~~~~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~l~ 228 (712)
+|+|||||++.++.+++.+++.+|++|+++.|++.|++||.+.++++||+.++.+|+.|++.+|.+.|.+||.+||.++.
T Consensus 88 ll~~~Yt~~~~i~~~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~v~ 167 (256)
T 3hve_A 88 ILDYIFSGQIRLNEDTIQDVVQAADLLLLTDLKTLCCEFLEGCIAAENCIGIRDFALHYCLHHVHYLATEYLETHFRDVS 167 (256)
T ss_dssp HHHHHHHSCCCCC-CCHHHHHHHHHHHTCHHHHHHHHHHHHHTCCSSTTHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT
T ss_pred HHhhccCCCCcccHhHHHHHHHHHHHHChHHHHHHHHHHHHhhCCHhhHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCccccccCCHHHHHhhccCCCCCCCChhHHHHHHHHHHhcChhhHHHHHHHhhhcccCCCCCHHHHHHhhccCCCccCC
Q psy14726 229 RESEEIVFISEQELEEIISSDELNVKSEETVWELIIRWIDYDPENRKKHIVSLMKNIRLGLLETEFFREKVKHHPYVQST 308 (712)
Q Consensus 229 ~~~~~f~~l~~~~l~~ll~~d~L~v~~E~~v~~~v~~W~~~~~~~r~~~~~~ll~~vr~~~l~~~~l~~~v~~~~~~~~~ 308 (712)
.+++|.+|+.+.+..||++|.|+|.+|.+||+++++|+++++++|.+++.+||++|||++|++++|.+.+++.+++..+
T Consensus 168 -~~~~f~~L~~~~l~~lL~~d~L~v~~E~~v~~av~~W~~~~~~~R~~~~~~ll~~VRf~~l~~~~l~~~v~~~~l~~~~ 246 (256)
T 3hve_A 168 -STEEFLELSPQKLKEVISLEKLNVGNERYVFEAVIRWIAHDTEIRKVHMKDVMSALWVSGLDSSYLREQMLNEPLVREI 246 (256)
T ss_dssp -TCHHHHSSCHHHHHHHHHCC-------CTTHHHHTTTCCC--CCSTTTHHHHHHHHHHHTTCC-CHHHHHHTSTTHHHH
T ss_pred -CCcchhcCCHHHHHHHHccCCCCCCCHHHHHHHHHHHHHcCHHHHHHHHHHHHHhCCCCCCCHHHHHHHHhcChHHHhh
Confidence 7889999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred -CchhhHHH
Q psy14726 309 -PECRPIII 316 (712)
Q Consensus 309 -~~~~~~~~ 316 (712)
++|++++.
T Consensus 247 ~~~c~~ll~ 255 (256)
T 3hve_A 247 VKECSNIPL 255 (256)
T ss_dssp HCC------
T ss_pred HHHHHHHhh
Confidence 78988764
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-41 Score=353.26 Aligned_cols=277 Identities=18% Similarity=0.284 Sum_probs=234.7
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCC--CCCcceeEEEEECCeEEEEcccC----C--CCCCceeEEeecC
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPM--NFKRCYVSTAVHHDVIYAMGGYN----G--QRRQNSVEKYNYT 467 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~--~~~r~~~~~~~~~~~iyv~GG~~----~--~~~~~~v~~yd~~ 467 (712)
.+.||++|| +++++|||.+++|.. +++ |.+|.+|++++++++||++||.. . ....+++++||+.
T Consensus 4 ~~~l~~~GG-------~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~ 75 (315)
T 4asc_A 4 QDLIFMISE-------EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHL 75 (315)
T ss_dssp EEEEEEEET-------TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETT
T ss_pred ceEEEEEcC-------CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCC
Confidence 467999999 579999999999987 655 45899999999999999999962 1 1234569999999
Q ss_pred CCceEEcccCCccccceeEEEECCEEEEEcccC---CCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEc
Q psy14726 468 ENQWSLIAPMNVERSDASATTLQGKIYITGGFN---GHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIG 544 (712)
Q Consensus 468 ~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~---~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~G 544 (712)
+++|+.++++|.+|.+|++++++++|||+||.+ +...++++++||+.+++|+.++++|.+|.+|++++++++||++|
T Consensus 76 ~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~G 155 (315)
T 4asc_A 76 DSEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIG 155 (315)
T ss_dssp TTEEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEC
T ss_pred CCeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEe
Confidence 999999999999999999999999999999974 35678999999999999999999999999999999999999999
Q ss_pred CC-CCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeEEEccCCCCccc
Q psy14726 545 GF-NGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRS 623 (712)
Q Consensus 545 G~-~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~ 623 (712)
|. ++....+++++||+.+++|+.++++|.+|..|++++++++||++||.++....+++++||+++++|+.++++|.+|.
T Consensus 156 G~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~ 235 (315)
T 4asc_A 156 GKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERS 235 (315)
T ss_dssp CBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCB
T ss_pred CCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCccc
Confidence 98 55566899999999999999999999999999999999999999999888788899999999999999999999999
Q ss_pred ceEEEEEcCcceeEeccccccchhhHHhhhhhhcccccccccccccCCcccccccCccCCCCccccc
Q psy14726 624 ALSACVIMGLPNVYDYIHQHRDSLMEEKRQKLLAIEGRQRQNQSEEGNSSQQSVLPSSNSNVSSSDG 690 (712)
Q Consensus 624 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~w~~~p~~~~~~~~~~~ 690 (712)
.|+++++++++|++++.......-........-.++ .|++..++|+.+ ++..|...+
T Consensus 236 ~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~-------~yd~~~~~W~~~---~~~~r~~~~ 292 (315)
T 4asc_A 236 SLSLVSLVGTLYAIGGFATLETESGELVPTELNDIW-------RYNEEEKKWEGV---LREIAYAAG 292 (315)
T ss_dssp SCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEE-------EEETTTTEEEEE---ESCSSCCSS
T ss_pred ceeEEEECCEEEEECCccccCcCCccccccccCcEE-------EecCCCChhhhh---ccCCcCccc
Confidence 999999999999997664321000000000111222 499999999998 334444433
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-40 Score=352.85 Aligned_cols=259 Identities=16% Similarity=0.196 Sum_probs=222.5
Q ss_pred cCCCCCCCcceEEEEECCEEEEEeecCCCCccceEEEEECC--CCcEEEeCCCC-CCcceeEEEEECCeEEEEccc-C--
Q psy14726 380 QVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAV--TKVWKEIAPMN-FKRCYVSTAVHHDVIYAMGGY-N-- 453 (712)
Q Consensus 380 ~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~--~~~W~~~~~~~-~~r~~~~~~~~~~~iyv~GG~-~-- 453 (712)
.+++|.+|.+|++++++++|||+||..+ +++++||+. +++|..++++| .+|..|++++++++|||+||. .
T Consensus 3 l~~lP~~r~~~~~~~~~~~iyv~GG~~~----~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~ 78 (357)
T 2uvk_A 3 LPETPVPFKSGTGAIDNDTVYIGLGSAG----TAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNS 78 (357)
T ss_dssp SCCCSSCCCSCEEEEETTEEEEECGGGT----TCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECT
T ss_pred CCCCCccccceEEEEECCEEEEEeCcCC----CeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCC
Confidence 4678889999999999999999999764 479999998 59999999999 899999999999999999998 3
Q ss_pred --CCCCCceeEEeecCCCceEEcccCC-ccccceeEEEECCEEEEEcccCCC----------------------------
Q psy14726 454 --GQRRQNSVEKYNYTENQWSLIAPMN-VERSDASATTLQGKIYITGGFNGH---------------------------- 502 (712)
Q Consensus 454 --~~~~~~~v~~yd~~~~~W~~~~~~p-~~r~~~~~~~~~~~iyv~GG~~~~---------------------------- 502 (712)
....++++++||+.+++|+.+++++ .+|.+|++++++++|||+||.++.
T Consensus 79 ~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (357)
T 2uvk_A 79 EGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFD 158 (357)
T ss_dssp TSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHS
T ss_pred CccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhcc
Confidence 2245789999999999999999998 999999999999999999998643
Q ss_pred ------CccCceEEeeCCCCeeEEeCCCCCCCcc-eEEEEECCEEEEEcCCCCC-CccceEEEEeC--CCCcEEEcCCCC
Q psy14726 503 ------NCLNSCEVYDPECNQWTLIEPMRHRRSG-VSCIAYHECIYVIGGFNGM-SRMCNGEKYNP--VTKTWSQVPDMY 572 (712)
Q Consensus 503 ------~~~~~v~~yd~~~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~-~~~~~v~~yd~--~~~~W~~~~~~p 572 (712)
..++++++||+.+++|+.++++|.+|.. +++++++++||++||.++. ....++++||+ .+++|+.++++|
T Consensus 159 ~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~ 238 (357)
T 2uvk_A 159 KKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVS 238 (357)
T ss_dssp SCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSS
T ss_pred ccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCC
Confidence 2468999999999999999999977554 9999999999999996543 34678999986 999999999887
Q ss_pred CC--ccceEEEEECCEEEEEcccCC-----------------CceeeeEEEEECCCCeEEEccCCCCcccceEEEEEcCc
Q psy14726 573 NP--RSNFAIEVIDDMIFAIGGFNG-----------------VTTIYHVECYDEKTDEWYEATDMNIYRSALSACVIMGL 633 (712)
Q Consensus 573 ~~--r~~~~~~~~~~~i~v~GG~~~-----------------~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~ 633 (712)
.+ |.+|++++++++|||+||.+. ...++++++||+.+++|+.++++|.+|..|++++++++
T Consensus 239 ~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~ 318 (357)
T 2uvk_A 239 SPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPWNNS 318 (357)
T ss_dssp TTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEEETTE
T ss_pred CCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeEEeCCE
Confidence 66 557889999999999999643 22346899999999999999999999999999999999
Q ss_pred ceeEecccc
Q psy14726 634 PNVYDYIHQ 642 (712)
Q Consensus 634 ~~v~~~~~~ 642 (712)
+|++++...
T Consensus 319 i~v~GG~~~ 327 (357)
T 2uvk_A 319 LLIIGGETA 327 (357)
T ss_dssp EEEEEEECG
T ss_pred EEEEeeeCC
Confidence 999977654
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-40 Score=347.40 Aligned_cols=295 Identities=19% Similarity=0.266 Sum_probs=241.5
Q ss_pred CCCcceEEEEECCEEEEEeecCCCCccceEEEEECCCCcEEEeC-CCCCCcceeEEEEECCeEEEEcccCC--C----CC
Q psy14726 385 GPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIA-PMNFKRCYVSTAVHHDVIYAMGGYNG--Q----RR 457 (712)
Q Consensus 385 ~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~-~~~~~r~~~~~~~~~~~iyv~GG~~~--~----~~ 457 (712)
.+|.++.. .+.||++||. ++++|||.+++|...+ +.+.+|..|++++.+++||++||... . ..
T Consensus 7 ~~r~~~~~---~~~i~~~GG~-------~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~ 76 (318)
T 2woz_A 7 IPRHGMFV---KDLILLVNDT-------AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPL 76 (318)
T ss_dssp SCCCCCSE---EEEEEEECSS-------EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CC
T ss_pred ccccccee---cchhhhcccc-------ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCc
Confidence 35554433 4689999993 4899999999998843 23478999999999999999999531 1 12
Q ss_pred CceeEEeecCCCceEEcccCCccccceeEEEECCEEEEEcccC--CCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEE
Q psy14726 458 QNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFN--GHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIA 535 (712)
Q Consensus 458 ~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~--~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~ 535 (712)
.+++++||+.+++|+.++++|.+|..|++++++++|||+||.+ +...++++++||+.+++|+.++++|.+|.+|++++
T Consensus 77 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~ 156 (318)
T 2woz_A 77 QSYFFQLDNVSSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS 156 (318)
T ss_dssp CBEEEEEETTTTEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE
T ss_pred cccEEEEeCCCCcEEECCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE
Confidence 3459999999999999999999999999999999999999986 45678999999999999999999999999999999
Q ss_pred ECCEEEEEcCCC-CCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeEEE
Q psy14726 536 YHECIYVIGGFN-GMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYE 614 (712)
Q Consensus 536 ~~~~iyv~GG~~-~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 614 (712)
++++||++||.+ +....+++++||+.+++|+.++++|.+|..|++++++++||++||.++....+++++||+++++|+.
T Consensus 157 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 236 (318)
T 2woz_A 157 HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEV 236 (318)
T ss_dssp ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEE
T ss_pred ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEE
Confidence 999999999974 3445789999999999999999999999999999999999999999887778899999999999999
Q ss_pred ccCCCCcccceEEEEEcCcceeEeccccccchhhHHhhhhhhcccccccccccccCCcccccccCccCCCCccccccccC
Q psy14726 615 ATDMNIYRSALSACVIMGLPNVYDYIHQHRDSLMEEKRQKLLAIEGRQRQNQSEEGNSSQQSVLPSSNSNVSSSDGVMNN 694 (712)
Q Consensus 615 ~~~~p~~r~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~w~~~p~~~~~~~~~~~~~~~ 694 (712)
++++|.+|..|+++++++++|++++........ .++. .........||+..++|+.+ ++..|...+.+.-
T Consensus 237 ~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~-----~~~~--~~~~~~v~~yd~~~~~W~~~---~~~~r~~~~~~~~ 306 (318)
T 2woz_A 237 MTEFPQERSSISLVSLAGSLYAIGGFAMIQLES-----KEFA--PTEVNDIWKYEDDKKEWAGM---LKEIRYASGASCL 306 (318)
T ss_dssp CCCCSSCCBSCEEEEETTEEEEECCBCCBC---------CCB--CCBCCCEEEEETTTTEEEEE---ESCCGGGTTCEEE
T ss_pred CCCCCCcccceEEEEECCEEEEECCeeccCCCC-----ceec--cceeeeEEEEeCCCCEehhh---cccccccccceee
Confidence 999999999999999999999996654322100 0000 00011223489999999998 5666766655543
Q ss_pred cccee
Q psy14726 695 ASSMM 699 (712)
Q Consensus 695 ~~~~~ 699 (712)
...++
T Consensus 307 ~~~iy 311 (318)
T 2woz_A 307 ATRLN 311 (318)
T ss_dssp EEEEE
T ss_pred CCEEE
Confidence 33343
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-40 Score=349.06 Aligned_cols=268 Identities=16% Similarity=0.215 Sum_probs=223.3
Q ss_pred CceEEEEeecCCCCCCceEEEEECC--CCcEEEcccCCCC-CCCcceEEEEECCEEEEEeec-C----CCCccceEEEEE
Q psy14726 347 HEILFAIGGWSGGSPTDFVETYDTR--ADRWVKIEQVDPM-GPRAYHGTAVIGYNIYVIGGF-D----GNEYYNSCRCFN 418 (712)
Q Consensus 347 ~~~i~~~GG~~~~~~~~~v~~~d~~--~~~W~~~~~~~~~-~~r~~~~~~~~~~~lyv~GG~-~----~~~~~~~v~~yd 418 (712)
.+.||++||... +++++||+. +++|..+ .++| .+|.+|++++++++|||+||. . .....+++++||
T Consensus 19 ~~~iyv~GG~~~----~~~~~~d~~~~~~~W~~~--~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd 92 (357)
T 2uvk_A 19 NDTVYIGLGSAG----TAWYKLDTQAKDKKWTAL--AAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYN 92 (357)
T ss_dssp TTEEEEECGGGT----TCEEEEETTSSSCCEEEC--CCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEE
T ss_pred CCEEEEEeCcCC----CeEEEEccccCCCCeeEC--CCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEe
Confidence 467999999753 479999998 4999994 5677 799999999999999999998 3 234578999999
Q ss_pred CCCCcEEEeCCCC-CCcceeEEEEECCeEEEEcccCCC----------------------------------CCCceeEE
Q psy14726 419 AVTKVWKEIAPMN-FKRCYVSTAVHHDVIYAMGGYNGQ----------------------------------RRQNSVEK 463 (712)
Q Consensus 419 ~~~~~W~~~~~~~-~~r~~~~~~~~~~~iyv~GG~~~~----------------------------------~~~~~v~~ 463 (712)
+.+++|+.+++++ .+|..|++++.+++|||+||.+.. ..++++++
T Consensus 93 ~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 172 (357)
T 2uvk_A 93 PKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLS 172 (357)
T ss_dssp TTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEE
T ss_pred CCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEE
Confidence 9999999999998 999999999999999999997633 24689999
Q ss_pred eecCCCceEEcccCCccccc-eeEEEECCEEEEEcccCCC-CccCceEEeeC--CCCeeEEeCCCCCC--CcceEEEEEC
Q psy14726 464 YNYTENQWSLIAPMNVERSD-ASATTLQGKIYITGGFNGH-NCLNSCEVYDP--ECNQWTLIEPMRHR--RSGVSCIAYH 537 (712)
Q Consensus 464 yd~~~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~-~~~~~v~~yd~--~~~~W~~~~~~p~~--r~~~~~~~~~ 537 (712)
||+.+++|+.++++|.+|.. |++++++++|||+||.++. ...+++++||+ .+++|+.++++|.+ |.+|++++++
T Consensus 173 yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~ 252 (357)
T 2uvk_A 173 FDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISN 252 (357)
T ss_dssp EETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEET
T ss_pred EeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEEEC
Confidence 99999999999999977555 9999999999999998643 45788999976 99999999988766 5578899999
Q ss_pred CEEEEEcCCCC-----------------CCccceEEEEeCCCCcEEEcCCCCCCccceEEEEECCEEEEEcccCCCc-ee
Q psy14726 538 ECIYVIGGFNG-----------------MSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVT-TI 599 (712)
Q Consensus 538 ~~iyv~GG~~~-----------------~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~-~~ 599 (712)
++|||+||.+. .....++++||+.+++|+.++++|.+|..|+++.++++|||+||.+... .+
T Consensus 253 ~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~ 332 (357)
T 2uvk_A 253 DSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGGETAGGKAV 332 (357)
T ss_dssp TEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEEETTEEEEEEEECGGGCEE
T ss_pred CEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeEEeCCEEEEEeeeCCCCCEe
Confidence 99999999532 2234689999999999999999999999999999999999999998655 46
Q ss_pred eeEEEEECCCCeEEEccCCCC
Q psy14726 600 YHVECYDEKTDEWYEATDMNI 620 (712)
Q Consensus 600 ~~v~~yd~~~~~W~~~~~~p~ 620 (712)
+++++|+.++++|....+.|.
T Consensus 333 ~~v~~l~~~~~~~~~~~~~~~ 353 (357)
T 2uvk_A 333 TDSVLITVKDNKVTVQNLEHH 353 (357)
T ss_dssp EEEEEEEC-CCSCEEEC----
T ss_pred eeEEEEEEcCcEeEeeecccc
Confidence 899999999999999877664
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-39 Score=366.88 Aligned_cols=327 Identities=14% Similarity=0.112 Sum_probs=262.2
Q ss_pred HHhcChhhHHHHHHHhhhcccCCCCCHHHHHHhhccCCCccCCC---chhhHHH------HhhhhcchhhhhhhcCCCCC
Q psy14726 266 WIDYDPENRKKHIVSLMKNIRLGLLETEFFREKVKHHPYVQSTP---ECRPIII------ETFKFLYDLELIAQIDGEVP 336 (712)
Q Consensus 266 W~~~~~~~r~~~~~~ll~~vr~~~l~~~~l~~~v~~~~~~~~~~---~~~~~~~------ea~~~~~~~~~~~~~~~~~~ 336 (712)
|+.++...|.+.++.++++++|++|.+.+++..+...+.+..++ .|.++.. +..++..
T Consensus 315 ~~~~~e~~R~~~lE~ldE~e~~~l~~~hY~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 381 (695)
T 2zwa_A 315 SADEATKKELLKVEPFDELEEFHLFCHHYVLCHATNYKEFAFTQGFLFDRSISEINLTVDEDYQLLE------------- 381 (695)
T ss_dssp HSCHHHHHHHHHHSCCCCHHHHHHHHHTEEEEEEESCTTCCCCTTTCCCC----CCCEECSSEEEEE-------------
T ss_pred hCCHHHHHHHHhccccchHHHHHHhhccEEEEEEecCCccccCcccCCCCccccccCCCCCceeEec-------------
Confidence 89888888899999999999999888887777677766666655 4444331 1111110
Q ss_pred CCCcccCcCC-----CceEEEEeecCCCCCCceEEEEECCCCcEEEcc-c---CCCCCCCcceEEEEE--CCEEEEEeec
Q psy14726 337 TPEIARPRVP-----HEILFAIGGWSGGSPTDFVETYDTRADRWVKIE-Q---VDPMGPRAYHGTAVI--GYNIYVIGGF 405 (712)
Q Consensus 337 ~~~~~~pr~~-----~~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~-~---~~~~~~r~~~~~~~~--~~~lyv~GG~ 405 (712)
.|..+.+|.+ .+.||++||... ...+++++||+.+++|..++ . ..+|.+|.+|+++++ +++|||+||.
T Consensus 382 ~~~~p~rr~g~~~~~~~~iyv~GG~~~-~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~ 460 (695)
T 2zwa_A 382 CECPINRKFGDVDVAGNDVFYMGGSNP-YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGR 460 (695)
T ss_dssp CCCTTCCBSCEEEECSSCEEEECCBSS-SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCB
T ss_pred cCCCCCCceeEEEEECCEEEEECCCCC-CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCC
Confidence 1112223433 467999999877 77788999999999999976 3 248899999999999 9999999998
Q ss_pred CCCC-ccceEEEEECCCCcEEEeCCCCCCcceeEEEEE-CCeEEEEcccCCCCCCceeEEeecCCCceEEccc---CCcc
Q psy14726 406 DGNE-YYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH-HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAP---MNVE 480 (712)
Q Consensus 406 ~~~~-~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~---~p~~ 480 (712)
++.. ..+++++||+.+++|+.++++|.+|..|+++++ +++|||+||.+... ++++||+.+++|+.+++ +|.+
T Consensus 461 ~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~---~v~~yd~~t~~W~~~~~~g~~p~~ 537 (695)
T 2zwa_A 461 KAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP---AMLLYNVTEEIFKDVTPKDEFFQN 537 (695)
T ss_dssp SSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC---SEEEEETTTTEEEECCCSSGGGGS
T ss_pred CCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC---CEEEEECCCCceEEccCCCCCCCc
Confidence 7644 688999999999999999999999999999997 99999999987654 89999999999999986 8999
Q ss_pred ccceeEEEEC---CEEEEEcccCC--CCccCceEEeeCCCCe------eEEeCCC-CCCCcceEEEEEC-CEEEEEcCCC
Q psy14726 481 RSDASATTLQ---GKIYITGGFNG--HNCLNSCEVYDPECNQ------WTLIEPM-RHRRSGVSCIAYH-ECIYVIGGFN 547 (712)
Q Consensus 481 r~~~~~~~~~---~~iyv~GG~~~--~~~~~~v~~yd~~~~~------W~~~~~~-p~~r~~~~~~~~~-~~iyv~GG~~ 547 (712)
|.+|++++++ ++|||+||.+. ...++++++||+.+++ |+.+.++ +.+|.+|++++++ ++|||+||.+
T Consensus 538 r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~ 617 (695)
T 2zwa_A 538 SLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTS 617 (695)
T ss_dssp CCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBC
T ss_pred ccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCcc
Confidence 9999988887 89999999854 3678999999999999 9999876 5899999999999 9999999976
Q ss_pred CCC---ccceEEEEeCCCCcEEEcCCC-------CCCccceEEEEECC-EEEEEcccC----CCceeeeEEEEECCC
Q psy14726 548 GMS---RMCNGEKYNPVTKTWSQVPDM-------YNPRSNFAIEVIDD-MIFAIGGFN----GVTTIYHVECYDEKT 609 (712)
Q Consensus 548 ~~~---~~~~v~~yd~~~~~W~~~~~~-------p~~r~~~~~~~~~~-~i~v~GG~~----~~~~~~~v~~yd~~~ 609 (712)
... ..+++++||+.+++|+.++-. +..+.+|+++.+++ +|||+||.. -+...+++|.+|..+
T Consensus 618 ~~~~~~~~~~v~~yd~~t~~W~~~~~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg~~cfsfGt~~n~i~~ldl~~ 694 (695)
T 2zwa_A 618 PSGLFDRTNSIISLDPLSETLTSIPISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGGATCYGFGSVTNVGLKLIAIA 694 (695)
T ss_dssp SSCCCCTTTSEEEEETTTTEEEECCCCHHHHHHSCCCCSSCEEECC---CEEEECCEEECTTSCEEECCCEEEEECC
T ss_pred CCCCCCCCCeEEEEECCCCeEEEeeccccccCCCCccceeeeEEEeCCCEEEEEeCCccCcCccccccceEEEEEEc
Confidence 543 478999999999999976321 12466788888866 999999953 234456788887654
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-36 Score=343.29 Aligned_cols=253 Identities=12% Similarity=0.133 Sum_probs=217.5
Q ss_pred CCCCCCCcceEEEEECCEEEEEeecCCCCccceEEEEECCCCcEEEeC-C-----CCCCcceeEEEEE--CCeEEEEccc
Q psy14726 381 VDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIA-P-----MNFKRCYVSTAVH--HDVIYAMGGY 452 (712)
Q Consensus 381 ~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~-~-----~~~~r~~~~~~~~--~~~iyv~GG~ 452 (712)
+..|.+|.+++ +++++.||++||..+ ...+++++||+.+++|..++ + +|.+|.+|+++++ +|+|||+||.
T Consensus 383 ~~~p~rr~g~~-~~~~~~iyv~GG~~~-~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~ 460 (695)
T 2zwa_A 383 ECPINRKFGDV-DVAGNDVFYMGGSNP-YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGR 460 (695)
T ss_dssp CCTTCCBSCEE-EECSSCEEEECCBSS-SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCB
T ss_pred CCCCCCceeEE-EEECCEEEEECCCCC-CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCC
Confidence 44555565544 448999999999877 77899999999999999998 5 7899999999999 9999999998
Q ss_pred CCCC-CCceeEEeecCCCceEEcccCCccccceeEEEE-CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCC---CCCC
Q psy14726 453 NGQR-RQNSVEKYNYTENQWSLIAPMNVERSDASATTL-QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEP---MRHR 527 (712)
Q Consensus 453 ~~~~-~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~---~p~~ 527 (712)
+... .++++|+||+.+++|+.++++|.+|.+|+++++ +++|||+||.++.. ++++||+.+++|+.+++ +|.+
T Consensus 461 ~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~---~v~~yd~~t~~W~~~~~~g~~p~~ 537 (695)
T 2zwa_A 461 KAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP---AMLLYNVTEEIFKDVTPKDEFFQN 537 (695)
T ss_dssp SSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC---SEEEEETTTTEEEECCCSSGGGGS
T ss_pred CCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC---CEEEEECCCCceEEccCCCCCCCc
Confidence 8654 689999999999999999999999999999997 99999999987654 89999999999999986 8999
Q ss_pred CcceEEEEEC---CEEEEEcCCCCC--CccceEEEEeCCCCc------EEEcCCC-CCCccceEEEEEC-CEEEEEcccC
Q psy14726 528 RSGVSCIAYH---ECIYVIGGFNGM--SRMCNGEKYNPVTKT------WSQVPDM-YNPRSNFAIEVID-DMIFAIGGFN 594 (712)
Q Consensus 528 r~~~~~~~~~---~~iyv~GG~~~~--~~~~~v~~yd~~~~~------W~~~~~~-p~~r~~~~~~~~~-~~i~v~GG~~ 594 (712)
|.+|++++++ ++||++||.+.. ...+++++||+.+++ |+.+.++ +.+|.+|++++++ ++|||+||.+
T Consensus 538 r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~ 617 (695)
T 2zwa_A 538 SLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTS 617 (695)
T ss_dssp CCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBC
T ss_pred ccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCcc
Confidence 9999988877 899999997433 567899999999999 9999875 5889999999999 9999999987
Q ss_pred CCc---eeeeEEEEECCCCeEEEccCCCC--------cccceEEEEEcC-cceeEec
Q psy14726 595 GVT---TIYHVECYDEKTDEWYEATDMNI--------YRSALSACVIMG-LPNVYDY 639 (712)
Q Consensus 595 ~~~---~~~~v~~yd~~~~~W~~~~~~p~--------~r~~~~~~~~~~-~~~v~~~ 639 (712)
+.. ..+++++||+.+++|+.+ ++|. .+.+|+++++++ ++|++++
T Consensus 618 ~~~~~~~~~~v~~yd~~t~~W~~~-~~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GG 673 (695)
T 2zwa_A 618 PSGLFDRTNSIISLDPLSETLTSI-PISRRIWEDHSLMLAGFSLVSTSMGTIHIIGG 673 (695)
T ss_dssp SSCCCCTTTSEEEEETTTTEEEEC-CCCHHHHHHSCCCCSSCEEECC---CEEEECC
T ss_pred CCCCCCCCCeEEEEECCCCeEEEe-eccccccCCCCccceeeeEEEeCCCEEEEEeC
Confidence 653 467899999999999965 3332 456788888877 8998854
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-35 Score=335.92 Aligned_cols=287 Identities=16% Similarity=0.189 Sum_probs=232.4
Q ss_pred CceEEEEeecCCCC------CCceEEEEECCCCcEEEcccCCCCCCCcce--EEEEE-CCEEEEEeecCCCCccceEEEE
Q psy14726 347 HEILFAIGGWSGGS------PTDFVETYDTRADRWVKIEQVDPMGPRAYH--GTAVI-GYNIYVIGGFDGNEYYNSCRCF 417 (712)
Q Consensus 347 ~~~i~~~GG~~~~~------~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~--~~~~~-~~~lyv~GG~~~~~~~~~v~~y 417 (712)
.+.||++||..... ..+.+++||+.+++|..++ .++.+|..+ +++++ +++||++||.... ++++|
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~--~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~----~v~~y 270 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRT--VTVTKHDMFCPGISMDGNGQIVVTGGNDAK----KTSLY 270 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCE--EEECSCCCSSCEEEECTTSCEEEECSSSTT----CEEEE
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCc--ccCCCCCCccccccCCCCCCEEEeCCCCCC----ceEEe
Confidence 57899999975422 2346899999999999854 344455444 44544 8999999997543 79999
Q ss_pred ECCCCcEEEeCCCCCCcceeEEEEE-CCeEEEEccc-CCCCCCceeEEeecCCCceEEc-----ccCCccccceeEEEEC
Q psy14726 418 NAVTKVWKEIAPMNFKRCYVSTAVH-HDVIYAMGGY-NGQRRQNSVEKYNYTENQWSLI-----APMNVERSDASATTLQ 490 (712)
Q Consensus 418 d~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~-~~~~~~~~v~~yd~~~~~W~~~-----~~~p~~r~~~~~~~~~ 490 (712)
|+.+++|..+++|+.+|..|+++++ +|+|||+||. ++....+++++||+.+++|+.+ .+|+..|.. +++..+
T Consensus 271 d~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~-~~~~~~ 349 (656)
T 1k3i_A 271 DSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQ-GLYRSD 349 (656)
T ss_dssp EGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTT-GGGTTT
T ss_pred cCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccccc-ceeecC
Confidence 9999999999999999999999999 9999999994 5555788999999999999997 567777654 666679
Q ss_pred CEEEEEcccCCC----CccCceEEeeCCCCeeEEeCC-CCC------CCcceEEEE---ECCEEEEEcCCCC---CCccc
Q psy14726 491 GKIYITGGFNGH----NCLNSCEVYDPECNQWTLIEP-MRH------RRSGVSCIA---YHECIYVIGGFNG---MSRMC 553 (712)
Q Consensus 491 ~~iyv~GG~~~~----~~~~~v~~yd~~~~~W~~~~~-~p~------~r~~~~~~~---~~~~iyv~GG~~~---~~~~~ 553 (712)
+++|++||.++. ...++++.||+.++.|..... .+. ++..++++. .+++||++||.+. ....+
T Consensus 350 ~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~ 429 (656)
T 1k3i_A 350 NHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATT 429 (656)
T ss_dssp CSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCC
T ss_pred CceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCC
Confidence 999999998764 357899999999999875432 221 233444443 5899999999642 22344
Q ss_pred ---eEEEEeCCCCcEEEcC--CCCCCccceEEEEE-CCEEEEEcccCC------CceeeeEEEEECCCCeEEEccCCCCc
Q psy14726 554 ---NGEKYNPVTKTWSQVP--DMYNPRSNFAIEVI-DDMIFAIGGFNG------VTTIYHVECYDEKTDEWYEATDMNIY 621 (712)
Q Consensus 554 ---~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~-~~~i~v~GG~~~------~~~~~~v~~yd~~~~~W~~~~~~p~~ 621 (712)
.+++||+.+++|..+. +||.+|..|+++++ +++|||+||.+. .....++++|||.+++|+.++++|.+
T Consensus 430 ~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~ 509 (656)
T 1k3i_A 430 NAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIV 509 (656)
T ss_dssp CEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSC
T ss_pred cceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCc
Confidence 7899999999999986 89999999999988 999999999763 24467899999999999999999999
Q ss_pred ccceEEEEE--cCcceeEecc
Q psy14726 622 RSALSACVI--MGLPNVYDYI 640 (712)
Q Consensus 622 r~~~~~~~~--~~~~~v~~~~ 640 (712)
|.+|+++++ +++++++++.
T Consensus 510 R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 510 RVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CCTTEEEEECTTSCEEEEECC
T ss_pred cccccHhhcCCCcEEEecCCC
Confidence 999999998 9999998764
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-34 Score=326.02 Aligned_cols=308 Identities=14% Similarity=0.157 Sum_probs=237.6
Q ss_pred EEEEECCCCcEEEcccCCCCCCCcceEEEEE--CCEEEEEeecCCCC------ccceEEEEECCCCcEEEeCCCCCCcce
Q psy14726 365 VETYDTRADRWVKIEQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNE------YYNSCRCFNAVTKVWKEIAPMNFKRCY 436 (712)
Q Consensus 365 v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~------~~~~v~~yd~~~~~W~~~~~~~~~r~~ 436 (712)
+++||+.+++|..+. ++ ||..++++++ +++||++||..... ....+++||+.+++|..++++|.+|..
T Consensus 168 ~~~~dp~~~~W~~~~--~~--P~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~ 243 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTI--DL--PIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDM 243 (656)
T ss_dssp CCCCCTTSCEEEEEE--EC--SSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCC
T ss_pred cccCCCCCCeeeeec--cC--CCCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCC
Confidence 567899999999853 33 4566777777 99999999975422 245799999999999999999888766
Q ss_pred eE--EE-EECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE-CCEEEEEcc-cCCCCccCceEEe
Q psy14726 437 VS--TA-VHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL-QGKIYITGG-FNGHNCLNSCEVY 511 (712)
Q Consensus 437 ~~--~~-~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG-~~~~~~~~~v~~y 511 (712)
++ ++ ..+|+||++||.... ++++||+.+++|+.+++||.+|.+|+++++ +++|||+|| .++...++++++|
T Consensus 244 ~~~~~~~~~~g~lyv~GG~~~~----~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~y 319 (656)
T 1k3i_A 244 FCPGISMDGNGQIVVTGGNDAK----KTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVY 319 (656)
T ss_dssp SSCEEEECTTSCEEEECSSSTT----CEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEE
T ss_pred ccccccCCCCCCEEEeCCCCCC----ceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEe
Confidence 53 34 468999999997643 799999999999999999999999999999 999999999 4556678999999
Q ss_pred eCCCCeeEEe-----CCCCCCCcceEEEEECCEEEEEcCCCCCC----ccceEEEEeCCCCcEEEcCC-CCC------Cc
Q psy14726 512 DPECNQWTLI-----EPMRHRRSGVSCIAYHECIYVIGGFNGMS----RMCNGEKYNPVTKTWSQVPD-MYN------PR 575 (712)
Q Consensus 512 d~~~~~W~~~-----~~~p~~r~~~~~~~~~~~iyv~GG~~~~~----~~~~v~~yd~~~~~W~~~~~-~p~------~r 575 (712)
|+.+++|+.+ .+++.+|.. +++..++++|++||.++.. ...+++.||+.+++|..... .+. ++
T Consensus 320 d~~t~~W~~~~~~~~~p~~~~~~~-~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~ 398 (656)
T 1k3i_A 320 SPSSKTWTSLPNAKVNPMLTADKQ-GLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDA 398 (656)
T ss_dssp ETTTTEEEEETTSCSGGGCCCCTT-GGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCC
T ss_pred CCCCCcceeCCCcccccccccccc-ceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCC
Confidence 9999999998 456666554 5556799999999976542 36789999999999876422 221 23
Q ss_pred cceEEEE---ECCEEEEEcccCC---Cceee---eEEEEECCCCeEEEcc--CCCCcccceEEEEE-cCcceeEeccccc
Q psy14726 576 SNFAIEV---IDDMIFAIGGFNG---VTTIY---HVECYDEKTDEWYEAT--DMNIYRSALSACVI-MGLPNVYDYIHQH 643 (712)
Q Consensus 576 ~~~~~~~---~~~~i~v~GG~~~---~~~~~---~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~-~~~~~v~~~~~~~ 643 (712)
..++++. .+++||++||.+. ...++ .+++||+.+++|..+. .||.+|..|+++++ ++++|++++...+
T Consensus 399 ~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~ 478 (656)
T 1k3i_A 399 MCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRG 478 (656)
T ss_dssp BTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBC
T ss_pred CCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccC
Confidence 4455553 4899999999643 22333 7999999999999986 99999999999988 9999999765433
Q ss_pred cchhhHHhhhhhhcccccccccccccCCcccccccCccCCCCccccccc
Q psy14726 644 RDSLMEEKRQKLLAIEGRQRQNQSEEGNSSQQSVLPSSNSNVSSSDGVM 692 (712)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~w~~~p~~~~~~~~~~~~~ 692 (712)
.. .. ....+..++ .||+..++|+.++ .++..|.+.+.+
T Consensus 479 ~~--~~-~~~~~~~v~-------~ydp~t~~W~~~~-~~~~~R~~hs~a 516 (656)
T 1k3i_A 479 IP--FE-DSTPVFTPE-------IYVPEQDTFYKQN-PNSIVRVYHSIS 516 (656)
T ss_dssp CT--TC-CCSBCCCCE-------EEEGGGTEEEECC-CCSSCCCTTEEE
T ss_pred cC--cC-CCCcccceE-------EEcCCCCceeecC-CCCCccccccHh
Confidence 21 00 011122333 4999999999886 467788776533
|
| >3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=9.6e-29 Score=232.77 Aligned_cols=150 Identities=23% Similarity=0.357 Sum_probs=142.5
Q ss_pred HHHHHHHHHHHhcCCCccEEEEecCCcEEeceeeeecccCHHHHHhhcCCCCcCCccceEEcCCCCHHHHHHHhhhhccC
Q psy14726 77 VQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIPGVDASVMTSLIEYAYLR 156 (712)
Q Consensus 77 ~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~e~~~~~~i~l~~~~~~~f~~~l~~~Yt~ 156 (712)
+.+.+.|.++++++.+|||+|.+ +|++|+|||.||+++|+||++||.+++.|+.. ..|.|+++++++|+.+|+|||+|
T Consensus 19 ~~l~~~l~~l~~~~~~~Dv~l~v-~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~-~~i~l~~~~~~~f~~~l~~~Yt~ 96 (172)
T 3htm_A 19 CRLADELGGLWENSRFTDCCLCV-AGQEFQAHKAILAARSPVFSAMFEHEMEESKK-NRVEINDVEPEVFKEMMCFIYTG 96 (172)
T ss_dssp CCHHHHHHHHHHHTCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHSCCCGGGT-TEEEECSSCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhCCCCcceEEEE-CCEEEEeeHHHHHHcCHHHHHHHccCccccCC-CeEEecCCCHHHHHHHHHHHhCC
Confidence 46788999999999999999999 99999999999999999999999999999988 99999999999999999999999
Q ss_pred ceecChhhHHHHHHHhhhcChHHHHHHHHHhhcccCChhhHHHHHHHHHHcccHHHHHHHHHHHHHHHHHhh
Q psy14726 157 KLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDVA 228 (712)
Q Consensus 157 ~~~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~l~ 228 (712)
++.++.+++.+|+.+|++|+++.|++.|+++|.+.++.+||+.++.+|..|++.+|.+.|.+||.+||.++.
T Consensus 97 ~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~~~~A~~~~~~~L~~~~~~~i~~~~~~v~ 168 (172)
T 3htm_A 97 KAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYHATDVL 168 (172)
T ss_dssp CCTTGGGTHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC----
T ss_pred CCCCcHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999987
|
| >3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A | Back alignment and structure |
|---|
Probab=99.93 E-value=3.3e-26 Score=236.99 Aligned_cols=150 Identities=23% Similarity=0.357 Sum_probs=137.6
Q ss_pred HHHHHHHHHHHhcCCCccEEEEecCCcEEeceeeeecccCHHHHHhhcCCCCcCCccceEEcCCCCHHHHHHHhhhhccC
Q psy14726 77 VQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIPGVDASVMTSLIEYAYLR 156 (712)
Q Consensus 77 ~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~e~~~~~~i~l~~~~~~~f~~~l~~~Yt~ 156 (712)
+.|.+.|.+|+.++.+|||+|.| +|++|+|||.|||++|+||++||.+++.|+.. .+|.|+++++++|+.+|+||||+
T Consensus 159 ~~l~~~l~~l~~~~~~~Dv~l~v-~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~~~-~~i~l~~~~~~~f~~~L~~iYt~ 236 (312)
T 3hqi_A 159 CRLADELGGLWENSRFTDCCLCV-AGQEFQAHKAILAARSPVFSAMFEHEMEESKK-NRVEINDVEPEVFKEMMCFIYTG 236 (312)
T ss_dssp CCHHHHHHHHHHTTCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHTTC-----CC-SEEEECSSCHHHHHHHHHHHHHS
T ss_pred chHHHHHHHHHhCCCCCceEEEE-CCEEEeHHHHHHHHcCHHHHHHhccCccccCC-ceEEecCCCHHHHHHHHHhhcCC
Confidence 35789999999999999999999 99999999999999999999999999999998 99999999999999999999999
Q ss_pred ceecChhhHHHHHHHhhhcChHHHHHHHHHhhcccCChhhHHHHHHHHHHcccHHHHHHHHHHHHHHHHHhh
Q psy14726 157 KLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDVA 228 (712)
Q Consensus 157 ~~~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~l~ 228 (712)
++.++.+++.+||.+|++|+++.|++.|+++|.+.++.+||..++.+|+.|++.+|.+.|.+||..||.++.
T Consensus 237 ~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~~v~ 308 (312)
T 3hqi_A 237 KAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYHATDVL 308 (312)
T ss_dssp CCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC----
T ss_pred CCCChHHHHHHHHHHHHHhCHHHHHHHHHHHHHccCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999999999999887
|
| >4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-26 Score=212.07 Aligned_cols=136 Identities=23% Similarity=0.378 Sum_probs=105.3
Q ss_pred HHHHHHHHHHHhcCCCccEEEEecCCcEEeceeeeecccCHHHHHhhcCCCCcCCccceEEcCCCCHHHHHHHhhhhccC
Q psy14726 77 VQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIPGVDASVMTSLIEYAYLR 156 (712)
Q Consensus 77 ~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~e~~~~~~i~l~~~~~~~f~~~l~~~Yt~ 156 (712)
+.+.+.|+++++++.+|||+|.+ +|++|+|||.||+++|+||++||.+++.|+.. ..|.++++++++|+.+|+|||+|
T Consensus 10 ~~l~~~l~~l~~~~~~~Dv~l~v-~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~-~~i~l~~~~~~~~~~~l~~~Y~~ 87 (145)
T 4eoz_A 10 CRLADELGGLWENSRFTDCCLCV-AGQEFQAHKAILAARSPVFSAMFEHEMEESKK-NRVEINDVEPEVFKEMMCFIYTG 87 (145)
T ss_dssp CCHHHHHHHHHHHTCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHSSSHHHHH-TEEEECSSCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhCCCCcceEEEE-CCEEEEeehHHHHHcCHHHHHHHcCCCcCCCC-ceEEecCCCHHHHHHHHHhhccC
Confidence 45788999999999999999999 99999999999999999999999999999888 89999999999999999999999
Q ss_pred ceecChhhHHHHHHHhhhcChHHHHHHHHHhhcccCChhhHHHHHHHHHHcccHHHHH
Q psy14726 157 KLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLTTPRNCFGILLFSRDHFCKKLEE 214 (712)
Q Consensus 157 ~~~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~l~~~n~~~i~~~A~~~~~~~L~~ 214 (712)
++.++.+++.+++.+|++|+++.|++.|+++|.+.++.+||+.++.+|+.|++.+|.+
T Consensus 88 ~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~l~~A~~~~~~~Lk~ 145 (145)
T 4eoz_A 88 KAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKT 145 (145)
T ss_dssp CCTTGGGTHHHHHHHHHHTTCHHHHHHHHCC---------------------------
T ss_pred ccCCcHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999988763
|
| >2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A | Back alignment and structure |
|---|
Probab=99.91 E-value=8.4e-25 Score=192.05 Aligned_cols=115 Identities=33% Similarity=0.650 Sum_probs=106.2
Q ss_pred chhHHHHHHHHHHHHhcCCCccEEEEecCCcEEeceeeeecccCHHHHHhhcCCCCcCCccceEEcCCCCHHHHHHHhhh
Q psy14726 73 RAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIPGVDASVMTSLIEY 152 (712)
Q Consensus 73 ~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~e~~~~~~i~l~~~~~~~f~~~l~~ 152 (712)
..|.+.+++.|+++++++.+|||+|.+ +|++|+|||.||+++|+||++||.+++.|+.. ..|.++++++++|+.+|+|
T Consensus 6 ~~h~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~~~aHk~vLaa~S~~F~~~f~~~~~e~~~-~~i~l~~~~~~~f~~ll~~ 83 (120)
T 2if5_A 6 PDHSSDILSGLNEQRTQGLLCDVVILV-EGREFPTHRSVLAACSQYFKKLFTSGAVVDQQ-NVYEIDFVSAEALTALMDF 83 (120)
T ss_dssp TTHHHHHHHHHHHHHHTTCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHC-----CC-SEEECCSSCHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHhcCCCCCeEEEE-CCEEEeHHHHHHHHhCHHHHHHhcCCccccCC-ceEEeCCCCHHHHHHHHHH
Confidence 467899999999999999999999999 99999999999999999999999999999988 8999999999999999999
Q ss_pred hccCceecChhhHHHHHHHhhhcChHHHHHHHHHhhc
Q psy14726 153 AYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIK 189 (712)
Q Consensus 153 ~Yt~~~~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~ 189 (712)
||||++.++.+++.+++.+|++|+++.|++.|++||.
T Consensus 84 ~Yt~~~~~~~~~~~~ll~~A~~~~i~~L~~~C~~~L~ 120 (120)
T 2if5_A 84 AYTATLTVSTANVGDILSAARLLEIPAVSHVCADLLD 120 (120)
T ss_dssp HHHSCCCCCGGGHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred HcCCCCccCHHHHHHHHHHHHHhCCHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999873
|
| >2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.91 E-value=7.3e-25 Score=197.20 Aligned_cols=125 Identities=28% Similarity=0.547 Sum_probs=116.3
Q ss_pred cccCCchhHHHHHHHHHHHHhcCCCccEEEEecCCcEEeceeeeecccCHHHHHhhcCCCCcCCccceEEcC-CCCHHHH
Q psy14726 68 FSSIDRAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIP-GVDASVM 146 (712)
Q Consensus 68 ~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~e~~~~~~i~l~-~~~~~~f 146 (712)
+......|...+++.|++|++++.+|||+|.+ +|++|+|||.||+++|+||++||.+++.|+ ..|.++ ++++++|
T Consensus 12 ~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~~~e~---~~i~l~~~v~~~~~ 87 (138)
T 2z8h_A 12 FAYESSVHSTNVLLSLNDQRKKDVLCDVTVLV-EGQRFRAHRSVLAACSSYFHSRIVGQTDAE---LTVTLPEEVTVKGF 87 (138)
T ss_dssp CCCCCSSHHHHHHHHHHHHHHHTCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTCCCTT---EEEECCTTSCHHHH
T ss_pred eEecCCchHHHHHHHHHHHHhhCCCcCeEEEE-CCEEEechHHHHHHcCHHHHHHHhcCCCCC---ceEEeCCCCCHHHH
Confidence 44445578899999999999999999999999 899999999999999999999999988763 578995 8999999
Q ss_pred HHHhhhhccCceecChhhHHHHHHHhhhcChHHHHHHHHHhhcccCChhh
Q psy14726 147 TSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLTTPRN 196 (712)
Q Consensus 147 ~~~l~~~Yt~~~~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~l~~~n 196 (712)
+.+|+|||||++.++.+++.+|+.+|++|+++.|++.|++||.+.++.+|
T Consensus 88 ~~lL~~~Ytg~~~i~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~l~~sn 137 (138)
T 2z8h_A 88 EPLIQFAYTAKLILSKDNVDEVCRCVEFLSVHNIEESCFQFLKFKFLDST 137 (138)
T ss_dssp HHHHHHHHHSCCCCCTTTHHHHHHHHHHHTCGGGHHHHHHHTTCCCSCCC
T ss_pred HHHHHHhcCCCcccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccccc
Confidence 99999999999999999999999999999999999999999999998877
|
| >1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-24 Score=192.49 Aligned_cols=118 Identities=25% Similarity=0.542 Sum_probs=111.4
Q ss_pred CCchhHHHHHHHHHHHHhcCCCccEEEEecCCcEEeceeeeecccCHHHHHhhcCCCCcCCccceEEc-CCCCHHHHHHH
Q psy14726 71 IDRAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEI-PGVDASVMTSL 149 (712)
Q Consensus 71 ~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~e~~~~~~i~l-~~~~~~~f~~~ 149 (712)
....|...+++.|+++++++.+|||+|.+ +|++|+|||.||+++|+||++||.+++.| .. ..|.| +++++++|+.+
T Consensus 8 ~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~~~aHk~iLaa~S~~F~~~f~~~~~e-~~-~~i~l~~~~~~~~f~~l 84 (127)
T 1r29_A 8 QFTRHASDVLLNLNRLRSRDILTDVVIVV-SREQFRAHKTVLMACSGLFYSIFTDQLKR-NL-SVINLDPEINPEGFNIL 84 (127)
T ss_dssp CCTTHHHHHHHHHHHHHHTTCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTSTTTT-TC-SEEECCTTSCHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHhcCCCCCEEEEE-CCEEEehHHHHHHHhCHHHHHHhcCCccC-CC-CEEEeCCCCCHHHHHHH
Confidence 34467899999999999999999999999 89999999999999999999999999998 56 89999 99999999999
Q ss_pred hhhhccCceecChhhHHHHHHHhhhcChHHHHHHHHHhhccc
Q psy14726 150 IEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRL 191 (712)
Q Consensus 150 l~~~Yt~~~~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 191 (712)
|+|||||++.++.+++.+|+.+|++|+++.|++.|+++|.++
T Consensus 85 l~~~Ytg~~~~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 126 (127)
T 1r29_A 85 LDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKAS 126 (127)
T ss_dssp HHHHHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred HHHHcCCCcCcCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999998653
|
| >2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.91 E-value=7.9e-25 Score=195.91 Aligned_cols=118 Identities=28% Similarity=0.481 Sum_probs=103.4
Q ss_pred chhHHHHHHHHHHHHhcCCCccEEEEecCCcEEeceeeeecccCHHHHHhhcCCCCcCCccceEEcCCCCHHHHHHHhhh
Q psy14726 73 RAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIPGVDASVMTSLIEY 152 (712)
Q Consensus 73 ~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~e~~~~~~i~l~~~~~~~f~~~l~~ 152 (712)
..|...+++.|++|++++.+|||+|++ +|++|+|||.||+++|+||++||.+++ . .+|.|+++++++|+.+|+|
T Consensus 6 ~~h~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~mf~~~~----~-~~i~l~~~~~~~f~~lL~f 79 (135)
T 2yy9_A 6 SGHSVRVLQELNKQREKGQYCDATLDV-GGLVFKAHWSVLACCSHFFQRIYGDGT----G-GSVVLPAGFAEIFGLLLDF 79 (135)
T ss_dssp -CHHHHHHHHHHHHHHTTTTCCEEEEE-TTEEEEECHHHHHHHCHHHHHTCC---------CCEEECGGGHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhcCCCcceEEEE-CCEEEehHHHHHHHhCHHHHHHHcCCC----C-CeEEeCCCCHHHHHHHHHH
Confidence 367889999999999999999999999 999999999999999999999999876 4 6799999999999999999
Q ss_pred hccCceecChhhHHHHHHHhhhcChHHHHHHHHHhhcccCChhh
Q psy14726 153 AYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLTTPRN 196 (712)
Q Consensus 153 ~Yt~~~~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~l~~~n 196 (712)
||||++.++.+++.+|+.+|++|+++.|++.|++||.+.+...+
T Consensus 80 iYtg~~~i~~~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l~~~~ 123 (135)
T 2yy9_A 80 FYTGHLALTSGNRDQVLLAAKELRVPEAVELCQSFQPQTSVGQA 123 (135)
T ss_dssp HHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHCCC-------
T ss_pred HhCCCCCCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccCCC
Confidence 99999999999999999999999999999999999988776443
|
| >3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=1e-24 Score=190.74 Aligned_cols=112 Identities=30% Similarity=0.508 Sum_probs=104.9
Q ss_pred hhHHHHHHHHHHHHhcCCCccEEEEecCCcEEeceeeeecccCHHHHHhhcCCCCcCCccceEEcCCCCHHHHHHHhhhh
Q psy14726 74 AMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIPGVDASVMTSLIEYA 153 (712)
Q Consensus 74 ~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~e~~~~~~i~l~~~~~~~f~~~l~~~ 153 (712)
.|...+++.|+++++++.+|||+|.+ +|++|+|||.||+++|+||++||.+++ + ..|.|+++++++|+.+|+||
T Consensus 6 ~h~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~~----~-~~i~l~~~~~~~f~~ll~~i 79 (119)
T 3b84_A 6 QHSVRVLQELNKQREKGQYCDATLDV-GGLVFKAHWSVLACCSHFFQSLYGDGS----G-GSVVLPAGFAEIFGLLLDFF 79 (119)
T ss_dssp HHHHHHHHHHHHHHHHTCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTTT----C-CCEEECGGGHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCCCcceEEEE-CCEEEEeeHHHHhhcCHHHHHHHCCCC----C-CeEEeCCCCHHHHHHHHHHH
Confidence 67889999999999999999999999 999999999999999999999999866 4 68999999999999999999
Q ss_pred ccCceecChhhHHHHHHHhhhcChHHHHHHHHHhhccc
Q psy14726 154 YLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRL 191 (712)
Q Consensus 154 Yt~~~~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 191 (712)
|||++.++.+++.+|+.+|++|++++|++.|++||.+.
T Consensus 80 Ytg~~~~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~ 117 (119)
T 3b84_A 80 YTGHLALTSGNRDQVLLAARELRVPEAVELCQSFKPKT 117 (119)
T ss_dssp HHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHCC---
T ss_pred cCCCCccCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999998653
|
| >2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-24 Score=196.47 Aligned_cols=120 Identities=28% Similarity=0.629 Sum_probs=107.4
Q ss_pred cccCCchhHHHHHHHHHHHHhcCCCccEEEEecCCcEEeceeeeecccCHHHHHhhcCCCCc--CCccceEEcCCCCHHH
Q psy14726 68 FSSIDRAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHD--QEKFSLVEIPGVDASV 145 (712)
Q Consensus 68 ~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~e--~~~~~~i~l~~~~~~~ 145 (712)
....+..+...+++.|++|++++.+|||+|.+ +|++|+|||.||+++|+||++||.+++.+ +.. ..|.|+++++++
T Consensus 23 ~~~~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~-~~I~l~~v~~~~ 100 (144)
T 2ppi_A 23 MAVSDPQHAARLLRALSSFREESRFCDAHLVL-DGEEIPVQKNILAAASPYIRTKLNYNPPKDDGST-YKIELEGISVMV 100 (144)
T ss_dssp CCCCCTTHHHHHHHHHHHTTC--CCCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHHCC-----CC-CEEECCSSCHHH
T ss_pred eeecCcchHHHHHHHHHHHHhcCCCcceEEEE-CCEEEehHHHHHHHcCHHHHHHHcCCCccccCCC-cEEEeCCCCHHH
Confidence 44455578899999999999999999999999 99999999999999999999999998876 556 789999999999
Q ss_pred HHHHhhhhccCceecChhhHHHHHHHhhhcChHHHHHHHHHhhc
Q psy14726 146 MTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIK 189 (712)
Q Consensus 146 f~~~l~~~Yt~~~~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~ 189 (712)
|+.+|+|||||++.++.+++.+|+.+|++|+++.|++.|++||+
T Consensus 101 f~~lL~fiYtg~~~i~~~~v~~ll~~A~~l~i~~L~~~C~~~L~ 144 (144)
T 2ppi_A 101 MREILDYIFSGQIRLNEDTIQDVVQAADLLLLTDLKTLCCEFLE 144 (144)
T ss_dssp HHHHHHHHTTSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHTTC-
T ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCcHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999874
|
| >1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A | Back alignment and structure |
|---|
Probab=99.90 E-value=5.6e-24 Score=186.78 Aligned_cols=114 Identities=21% Similarity=0.446 Sum_probs=106.7
Q ss_pred CCchhHHHHHHHHHHHHhcCCCccEEEEecCCcEEeceeeeecccCHHHHHhhcCCCCcCCccceEEcCCCCHHHHHHHh
Q psy14726 71 IDRAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIPGVDASVMTSLI 150 (712)
Q Consensus 71 ~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~e~~~~~~i~l~~~~~~~f~~~l 150 (712)
....|+..+++.|+++++++.+|||+|.+ +|++|+|||.||+++|+||++||.++ . .+|.++++++++|+.+|
T Consensus 7 ~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~-----~-~~i~l~~~~~~~f~~ll 79 (121)
T 1buo_A 7 QNPSHPTGLLCKANQMRLAGTLCDVVIMV-DSQEFHAHRTVLACTSKMFEILFHRN-----S-QHYTLDFLSPKTFQQIL 79 (121)
T ss_dssp CCTTHHHHHHHHHHHHHHHTTTCCEEEEE-SSCEEEECHHHHHHHCHHHHHHTTSC-----C-SEEEECSSCHHHHHHHH
T ss_pred cCcchHHHHHHHHHHHHhcCCCCCEEEEE-CCEEEehhHHHHhhcCHHHHHHHcCC-----C-cEEEeCCCCHHHHHHHH
Confidence 34468899999999999999999999999 89999999999999999999999863 4 68999999999999999
Q ss_pred hhhccCceecChhhHHHHHHHhhhcChHHHHHHHHHhhccc
Q psy14726 151 EYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRL 191 (712)
Q Consensus 151 ~~~Yt~~~~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 191 (712)
+|||||++.++.+++.+++.+|++|+++.|++.|+++|.+.
T Consensus 80 ~~~Ytg~~~~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 120 (121)
T 1buo_A 80 EYAYTATLQAKAEDLDDLLYAAEILEIEYLEEQCLKMLETI 120 (121)
T ss_dssp HHHHHSCCCCCGGGHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HhhcCCCcCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999998653
|
| >2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=4.8e-24 Score=185.90 Aligned_cols=111 Identities=28% Similarity=0.483 Sum_probs=104.2
Q ss_pred hhHHHHHHHHHHHHhcCCCccEEEEecCCcEEeceeeeecccCHHHHHhhcCCCCcCCccceEEcC--CCCHHHHHHHhh
Q psy14726 74 AMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIP--GVDASVMTSLIE 151 (712)
Q Consensus 74 ~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~e~~~~~~i~l~--~~~~~~f~~~l~ 151 (712)
.|...+++.|+++++++.+|||+|.+ +|++|+|||.||+++|+||++||.++ .+ ..|.|+ ++++++|+.+|+
T Consensus 4 ~h~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~~~aHk~vLaa~S~yF~~~f~~~----~~-~~i~l~~~~~~~~~f~~ll~ 77 (116)
T 2vpk_A 4 HHCEHLLERLNKQREAGFLCDCTIVI-GEFQFKAHRNVLASFSEYFGAIYRST----SE-NNVFLDQSQVKADGFQKLLE 77 (116)
T ss_dssp HHHHHHHHHHHHHHHHTCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTC----CC-SCEECCTTTCCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCCCCcEEEEE-CCEEEeccHHHHhhcCHHHHHHHcCC----CC-CeEEeecCCCCHHHHHHHHH
Confidence 57889999999999999999999999 99999999999999999999999986 24 678887 999999999999
Q ss_pred hhccCceecChhhHHHHHHHhhhcChHHHHHHHHHhhcc
Q psy14726 152 YAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKR 190 (712)
Q Consensus 152 ~~Yt~~~~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~ 190 (712)
|||||++.++.+++.+++.+|++|+++.|++.|++||.+
T Consensus 78 ~~Yt~~~~~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~ 116 (116)
T 2vpk_A 78 FIYTGTLNLDSWNVKEIHQAADYLKVEEVVTKCKIKMED 116 (116)
T ss_dssp HHHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred HHcCCCcccCHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999863
|
| >3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.8e-24 Score=191.36 Aligned_cols=113 Identities=28% Similarity=0.629 Sum_probs=107.0
Q ss_pred CchhHHHHHHHHHHHHhcCCCccEEEEecCCcEEeceeeeecccCHHHHHhhcCCCCcCCccceEEcCC-CCHHHHHHHh
Q psy14726 72 DRAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIPG-VDASVMTSLI 150 (712)
Q Consensus 72 ~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~e~~~~~~i~l~~-~~~~~f~~~l 150 (712)
+..|...+++.|+++++++.+|||+|.+ +|++|+|||.||+++|+||++||.+++.| . ..|.+++ +++++|+.+|
T Consensus 12 ~~~~~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~~~e--~-~~i~l~~~~~~~~f~~~l 87 (125)
T 3ohu_A 12 STVHCTNILLGLNDQRKKDILCDVTLIV-ERKEFRAHRAVLAACSEYFWQALVGQTKN--D-LVVSLPEEVTARGFGPLL 87 (125)
T ss_dssp CSSHHHHHHHHHHHHHHHTCSCCEEEEE-TTEEEEECHHHHHHHBHHHHHHHTTCCCS--S-CEEECCTTCCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHhcCCccceEEEE-CCEEEechHHHHHHcCHHHHHHhcCCCCC--C-cEEEeCCCCCHHHHHHHH
Confidence 3468899999999999999999999999 99999999999999999999999998877 4 6899998 9999999999
Q ss_pred hhhccCceecChhhHHHHHHHhhhcChHHHHHHHHHhh
Q psy14726 151 EYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFI 188 (712)
Q Consensus 151 ~~~Yt~~~~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l 188 (712)
+|||||++.++.+++.+|+.+|++|+++.|++.|++||
T Consensus 88 ~~iYtg~~~~~~~~v~~ll~~A~~l~i~~L~~~C~~~L 125 (125)
T 3ohu_A 88 QFAYTAKLLLSRENIREVIRCAEFLRMHNLEDSCFSFL 125 (125)
T ss_dssp HHHTTSEEEECTTTHHHHHHHHHHHTBSSCTTSSCCCC
T ss_pred HhHcCCceEECHHHHHHHHHHHHHhCCHHHHHHHHHhC
Confidence 99999999999999999999999999999999998875
|
| >3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=4.3e-24 Score=189.85 Aligned_cols=119 Identities=24% Similarity=0.509 Sum_probs=102.4
Q ss_pred cccCCchhHHHHHHHHHHHHhcCCCccEEEEecCCcEEeceeeeecccCHHHHHhhcCCCCcCCccceEEcC-CCCHHHH
Q psy14726 68 FSSIDRAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIP-GVDASVM 146 (712)
Q Consensus 68 ~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~e~~~~~~i~l~-~~~~~~f 146 (712)
.......+...+++.|+++++++.+|||+|.+ +|++|+|||.||+++|+||++||.++ .. .+|.|+ ++++++|
T Consensus 9 ~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~~~~Hk~vLaa~S~~F~~~f~~~----~~-~~i~l~~~~~~~~f 82 (129)
T 3ga1_A 9 LQMEIPNFGNSILECLNEQRLQGLYCDVSVVV-KGHAFKAHRAVLAASSSYFRDLFNNS----RS-AVVELPAAVQPQSF 82 (129)
T ss_dssp EEEECTTHHHHHHHHHHHHHHTTCSCCEEEEE-TTEEEEECHHHHHHHBHHHHHHHHHC----CC-SEEECCTTCCHHHH
T ss_pred EEeecCcHHHHHHHHHHHHHhcCCCcceEEEE-CCEEEEehHHHHHHcCHHHHHHHcCC----CC-CEEEECCCCCHHHH
Confidence 33344568889999999999999999999999 99999999999999999999999876 44 789997 8999999
Q ss_pred HHHhhhhccCceecChhhHHHHHHHhhhcChHHHHHHHHHhhcccC
Q psy14726 147 TSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLT 192 (712)
Q Consensus 147 ~~~l~~~Yt~~~~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~l 192 (712)
+.+|+|||||++.++.+++.+|+.+|++|+++.|++.|++||.+..
T Consensus 83 ~~ll~~iYtg~~~i~~~~~~~ll~~A~~~~i~~l~~~C~~~L~~~~ 128 (129)
T 3ga1_A 83 QQILSFCYTGRLSMNVGDQDLLMYTAGFLQIQEIMEKGTEFFLKVS 128 (129)
T ss_dssp HHHHHHHHHSEEECCTTTHHHHHHHHHHTTBTTSSCC---------
T ss_pred HHHHHHHhCCccccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999997643
|
| >2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A | Back alignment and structure |
|---|
Probab=99.89 E-value=9.7e-24 Score=184.55 Aligned_cols=110 Identities=32% Similarity=0.611 Sum_probs=103.4
Q ss_pred chhHHHHHHHHHHHHhcCCCccEEEEecCCcEEeceeeeecccCHHHHHhhcCCCCcCCccceEEcCCCCHHHHHHHhhh
Q psy14726 73 RAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIPGVDASVMTSLIEY 152 (712)
Q Consensus 73 ~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~e~~~~~~i~l~~~~~~~f~~~l~~ 152 (712)
..|...+++.|+++++++.+|||+|.+ +|++|+|||.||+++|+||++||.+ .. ..|.++++++++|+.+|+|
T Consensus 8 ~~h~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~~~aHk~vLaa~S~yF~~~f~~-----~~-~~i~l~~~~~~~f~~ll~~ 80 (119)
T 2q81_A 8 PQHSQHVLEQLNQQRQLGLLCDCTFVV-DGVHFKAHKAVLAACSEYFKMLFVD-----QK-DVVHLDISNAAGLGQVLEF 80 (119)
T ss_dssp HHHHHHHHHHHHHHHHHTCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHH-----CC-SGGGGGGCCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCCCcceEEEE-CCEEEehhHHHHHHcCHHHHHHHcC-----CC-CEEEeCCCCHHHHHHHHHH
Confidence 367889999999999999999999999 9999999999999999999999986 23 5678889999999999999
Q ss_pred hccCceecChhhHHHHHHHhhhcChHHHHHHHHHhhc
Q psy14726 153 AYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIK 189 (712)
Q Consensus 153 ~Yt~~~~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~ 189 (712)
||||++.++.+++.+++.+|++|++++|++.|++||.
T Consensus 81 ~Ytg~~~i~~~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 81 MYTAKLSLSPENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp HHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HcCCCCccCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999985
|
| >2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=4.7e-24 Score=188.02 Aligned_cols=114 Identities=29% Similarity=0.604 Sum_probs=104.1
Q ss_pred CchhHHHHHHHHHHHHhcCCCccEEEEecCCcEEeceeeeecccCHHHHHhhcCCCCcCCccceEEcC-CCCHHHHHHHh
Q psy14726 72 DRAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIP-GVDASVMTSLI 150 (712)
Q Consensus 72 ~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~e~~~~~~i~l~-~~~~~~f~~~l 150 (712)
...|...+++.|+++++++.+|||+|.+ +|++|+|||.|||++|+||++||.+++.|+ ..|.++ ++++++|+.+|
T Consensus 9 ~~~~~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~~~aHk~vLaa~S~yF~~mf~~~~~e~---~~i~l~~~v~~~~f~~lL 84 (124)
T 2ihc_A 9 SSVHSTNVLLSLNDQRKKDVLCDVTIFV-EGQRFRAHRSVLAACSSYFHSRIVGQADGE---LNITLPEEVTVKGFEPLI 84 (124)
T ss_dssp CSSHHHHHHHHHHHHHHHTCSCCEEEEE-TTEEEEECHHHHHHHBHHHHHHHTTC---C---EEEECCTTSCHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHhcCCCcCEEEEE-CCEEEecHHHHHHHcCHHHHHHHcCCCCCC---ceEeecCCcCHHHHHHHH
Confidence 3467889999999999999999999999 899999999999999999999999988763 578894 89999999999
Q ss_pred hhhccCceecChhhHHHHHHHhhhcChHHHHHHHHHhhc
Q psy14726 151 EYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIK 189 (712)
Q Consensus 151 ~~~Yt~~~~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~ 189 (712)
+|||||++.++.+++.+|+.+|++|+++.|++.|++||.
T Consensus 85 ~~iYtg~~~i~~~~v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 85 QFAYTAKLILSKENVDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp HHHHHSEEEEETTTHHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred HHhcCCCcccCHHHHHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999875
|
| >2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.2e-23 Score=179.69 Aligned_cols=105 Identities=23% Similarity=0.457 Sum_probs=92.5
Q ss_pred HHhcCCCccEEEEecCC---cEEeceeeeecccCHHHHHhhcCCCCcCCccceEEcCCCCHHHHHHHhhhhccCceecCh
Q psy14726 86 FREKNLLCDATIVLADN---SHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIPGVDASVMTSLIEYAYLRKLHITE 162 (712)
Q Consensus 86 l~~~~~~~Dv~l~v~~~---~~~~~Hk~vL~~~S~yF~~mf~~~~~e~~~~~~i~l~~~~~~~f~~~l~~~Yt~~~~i~~ 162 (712)
|++++.+|||+|.++++ ++|+|||.||+++|+||++||.+++.|+. ..|.|+++++++|+.+|+|||||++.++.
T Consensus 2 l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~--~~i~l~~~~~~~f~~~l~~iYt~~~~~~~ 79 (109)
T 2vkp_A 2 MFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVK--SEIHIPDVEPAAFLILLKYMYSDEIDLEA 79 (109)
T ss_dssp CTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------C--CEEEETTSCHHHHHHHHHHHHHCCCCCCT
T ss_pred cccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCC--CeEEeCCCCHHHHHHHHHHHcCCCccCCH
Confidence 57889999999999443 89999999999999999999999998876 68999999999999999999999999999
Q ss_pred hhHHHHHHHhhhcChHHHHHHHHHhhcccC
Q psy14726 163 DNVASLLLATDFFCMSKAQDLCCDFIKRLT 192 (712)
Q Consensus 163 ~~~~~ll~~A~~~~i~~L~~~c~~~l~~~l 192 (712)
+++.+++.+|++|+++.|++.|+++|.+++
T Consensus 80 ~~~~~ll~~A~~~~~~~L~~~c~~~l~~~l 109 (109)
T 2vkp_A 80 DTVLATLYAAKKYIVPALAKACVNFLETSL 109 (109)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHhhC
Confidence 999999999999999999999999987653
|
| >3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A | Back alignment and structure |
|---|
Probab=99.87 E-value=2.8e-22 Score=174.04 Aligned_cols=109 Identities=28% Similarity=0.520 Sum_probs=100.8
Q ss_pred CcccCCchhHHHHHHHHHHHHhcCCCccEEEEecCCcEEeceeeeecccCHHHHHhhcCCCCcCCccceEEcCCCCHHHH
Q psy14726 67 NFSSIDRAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIPGVDASVM 146 (712)
Q Consensus 67 ~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~e~~~~~~i~l~~~~~~~f 146 (712)
.....+..+...+++.|+++++++.+|||+|.+ +|++|+|||.||+++|+||++||.++ . ..|.++++++++|
T Consensus 6 ~~~~~~~~~~~~l~~~l~~~~~~~~~~Dv~l~v-~~~~f~aHk~vLaa~S~~F~~~f~~~-----~-~~i~l~~~~~~~f 78 (116)
T 3fkc_A 6 LISATDIQYSGSLLNSLNEQRGHGLFCDVTVIV-EDRKFRAHKNILSASSTYFHQLFSVA-----G-QVVELSFIRAEIF 78 (116)
T ss_dssp CCCCCCTTHHHHHHHHHHHHHHHTTTCCEEEEE-TTEEEEECHHHHHHHCHHHHHHTTSC-----C-SEEEECSSCHHHH
T ss_pred eeeecCccHHHHHHHHHHHHHhcCCceeEEEEE-CCEEEehhHHHHHHcCHHHHHHHcCC-----C-CEEEeCCCCHHHH
Confidence 344455678899999999999999999999999 99999999999999999999999874 4 6899999999999
Q ss_pred HHHhhhhccCce-ecChhhHHHHHHHhhhcChHHHHH
Q psy14726 147 TSLIEYAYLRKL-HITEDNVASLLLATDFFCMSKAQD 182 (712)
Q Consensus 147 ~~~l~~~Yt~~~-~i~~~~~~~ll~~A~~~~i~~L~~ 182 (712)
+.+|+|||||++ .++.+++.+++.+|++|+++.|++
T Consensus 79 ~~~l~~~Ytg~~~~~~~~~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 79 AEILNYIYSSKIVRVRSDLLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp HHHHHHHTTSCCCSCCHHHHHHHHHHHHHHTCHHHHT
T ss_pred HHHHHhhcCCCcCCCCHHHHHHHHHHHHHhCccccCc
Confidence 999999999999 799999999999999999999875
|
| >3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0 | Back alignment and structure |
|---|
Probab=99.85 E-value=4.8e-22 Score=172.85 Aligned_cols=103 Identities=18% Similarity=0.298 Sum_probs=92.8
Q ss_pred hHHHHHHHHHHHHhcCCCccEEEEecCCcEEeceeeeecccCHHHHHhhcCCCCcCCccceEEcCCCCHHHHHHHhhhhc
Q psy14726 75 MSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIPGVDASVMTSLIEYAY 154 (712)
Q Consensus 75 ~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~e~~~~~~i~l~~~~~~~f~~~l~~~Y 154 (712)
++..+++.|+ +.++.+|||+|.| +|++|+|||.|||++|+||++ .+ ..|.|+++++++|+.+|+|||
T Consensus 15 ~~~~~l~~l~--r~~~~~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~---------~~-~~i~l~~v~~~~f~~ll~fiY 81 (119)
T 3m5b_A 15 GSDRLVQLAA--RLRPALCDTLITV-GSQEFPAHSLVLAGVSQQLGR---------RG-QWALGEGISPSTFAQLLNFVY 81 (119)
T ss_dssp TTCHHHHHHH--HHTTTTCCEEEEE-TTEEEEECHHHHHTTCGGGCC---------CE-EEECCSSCCHHHHHHHHHHHT
T ss_pred chHHHHHHHH--HhcCCCcceEEEE-CCEEEeeEHHHHHHcCHHHhc---------CC-CEEEeCCCCHHHHHHHHHHHc
Confidence 3456677775 6789999999999 999999999999999999985 34 689999999999999999999
Q ss_pred cCceecChhhHHHHHHHhhhcChHHHHHHHHHhhcc
Q psy14726 155 LRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKR 190 (712)
Q Consensus 155 t~~~~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~ 190 (712)
||++.++.+++.+++.+|++|+++.|++.|++++..
T Consensus 82 tg~~~i~~~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 82 GESVELQPGELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp TCCEEECGGGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred CCCcCcCHHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 999999999999999999999999999999998765
|
| >2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.5e-17 Score=140.61 Aligned_cols=96 Identities=20% Similarity=0.328 Sum_probs=91.9
Q ss_pred hcccCChhhHHHHHHHHHHcccHHHHHHHHHHHHHHHHHhhcCccccccCCHHHHHhhccCCCCCCCChhHHHHHHHHHH
Q psy14726 188 IKRLTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDVARESEEIVFISEQELEEIISSDELNVKSEETVWELIIRWI 267 (712)
Q Consensus 188 l~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~l~~~~~~f~~l~~~~l~~ll~~d~L~v~~E~~v~~~v~~W~ 267 (712)
+.++++++||+.++.+|+.|++.+|.+.|.+||.+||.++. .+++|++|+.+.|..||++| +.+|.+||+++++|+
T Consensus 4 ~~~~L~~~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF~~v~-~~~eFl~L~~~~L~~lL~sd---v~~E~~vf~av~~Wv 79 (105)
T 2eqx_A 4 GSSGVQVGNCLQVMWLADRHSDPELYTAAKHCAKTHLAQLQ-NTEEFLHLPHRLLTDIISDG---VPCSQNPTEAIEAWI 79 (105)
T ss_dssp CCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTCHHHH-TSHHHHHSCHHHHHHHHHTC---EETTSCHHHHHHHHH
T ss_pred hhccCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHH-hcccHhhCCHHHHHHHHcCC---CCCHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999 78899999999999999997 788999999999999
Q ss_pred hcChhhHHHHHHHhhhcccC
Q psy14726 268 DYDPENRKKHIVSLMKNIRL 287 (712)
Q Consensus 268 ~~~~~~r~~~~~~ll~~vr~ 287 (712)
++++++|.+++++||++||+
T Consensus 80 ~~d~~~R~~~~~~Ll~~VR~ 99 (105)
T 2eqx_A 80 NFNKEEREAFAESLRTSLKE 99 (105)
T ss_dssp HTTHHHHHHHHHHHHHHCCE
T ss_pred HcCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999996
|
| >4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E* | Back alignment and structure |
|---|
Probab=99.35 E-value=1.2e-12 Score=108.50 Aligned_cols=81 Identities=17% Similarity=0.336 Sum_probs=68.4
Q ss_pred EEEEecCCcEEeceeeeecccCHHHHHhhcC--CCCcCCccceEEcCCCCHHHHHHHhhhhc-----c---Ccee---cC
Q psy14726 95 ATIVLADNSHFPIHRNILCACSDYFRALFTT--SLHDQEKFSLVEIPGVDASVMTSLIEYAY-----L---RKLH---IT 161 (712)
Q Consensus 95 v~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~--~~~e~~~~~~i~l~~~~~~~f~~~l~~~Y-----t---~~~~---i~ 161 (712)
|+|+..||++|.|||.+ |+.|+||++||.+ ++.|+.. ..|.|+++++.+++.+++|+| + +++. ++
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~~~-~~I~l~~V~~~iL~kViey~~~h~~~~~~~~~i~~~~i~ 81 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENET-NEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIA 81 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC---------CEEECTTSCHHHHHHHHHHHHHHHHHTTCCSCCCCCCCC
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCccccCC-CceECCCCCHHHHHHHHHHHHHhcccCCCcCCCCcCcCC
Confidence 77888899999999999 9999999999987 6777777 899999999999999999999 4 6776 89
Q ss_pred hhhHHHHHHHhhhcCh
Q psy14726 162 EDNVASLLLATDFFCM 177 (712)
Q Consensus 162 ~~~~~~ll~~A~~~~i 177 (712)
.+++.+|+.||++|++
T Consensus 82 ~~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 82 PEIALELLMAANFLDC 97 (97)
T ss_dssp GGGHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhhhCC
Confidence 9999999999999873
|
| >1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D | Back alignment and structure |
|---|
Probab=99.27 E-value=6.1e-12 Score=111.94 Aligned_cols=102 Identities=17% Similarity=0.308 Sum_probs=85.0
Q ss_pred EEEEecCCcEEeceeeeecccCHHHHHhhcCCCCcCCccceEEcCCCCHHHHHHHhhhhccCc-----------------
Q psy14726 95 ATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIPGVDASVMTSLIEYAYLRK----------------- 157 (712)
Q Consensus 95 v~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~e~~~~~~i~l~~~~~~~f~~~l~~~Yt~~----------------- 157 (712)
|+|+..||++|.+||.+ |..|.+|++||...- . ..|.|++++..+++.+++|+|+..
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~----~-~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~ 77 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG----M-DPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTD 77 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC----C-SSEECTTCCHHHHHHHHHHHHHHTTCC--------------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC----C-CceecCCcCHHHHHHHHHHHHHhccCCCccccccccccchh
Confidence 78888899999999998 889999999998631 4 679999999999999999998755
Q ss_pred ---------eecChhhHHHHHHHhhhcChHHHHHHHHHhhcccCChhhHHHHHH
Q psy14726 158 ---------LHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLTTPRNCFGILL 202 (712)
Q Consensus 158 ---------~~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~l~~~n~~~i~~ 202 (712)
+.++.+++.+|+.||++|+|..|.++|++++...+...++-+|..
T Consensus 78 ~i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeiR~ 131 (141)
T 1fs1_B 78 DIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRK 131 (141)
T ss_dssp ---HHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred hhhHHHHHHHhCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 567778888888888888888888888888877766666555443
|
| >2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=4.7e-12 Score=115.35 Aligned_cols=108 Identities=18% Similarity=0.350 Sum_probs=59.8
Q ss_pred EEEEecCCcEEeceeeeecccCHHHHHhhcCCCCcCCccceEEcCCCCHHHHHHHhhhhccCc-----------------
Q psy14726 95 ATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIPGVDASVMTSLIEYAYLRK----------------- 157 (712)
Q Consensus 95 v~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~e~~~~~~i~l~~~~~~~f~~~l~~~Yt~~----------------- 157 (712)
|+|+..||++|.+|+.+ |..|++|++||.... .. ..|.|++++..+++.+++|+|+..
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~---~~-~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~ 80 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDDC---VD-NGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATSD 80 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC----------------CCTTSCHHHHHHHHHC----------------------
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHccC---CC-CceeCCcCcHHHHHHHHHHHHHcccCCCccccccccccccc
Confidence 77777799999999998 889999999998742 33 579999999999999999999865
Q ss_pred ----------eecChhhHHHHHHHhhhcChHHHHHHHHHhhcccC---ChhhHHHHHHHHHHc
Q psy14726 158 ----------LHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLT---TPRNCFGILLFSRDH 207 (712)
Q Consensus 158 ----------~~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~l---~~~n~~~i~~~A~~~ 207 (712)
+.++.+++.+|+.||++|+|..|.++|++++...+ +++.+..++.++..+
T Consensus 81 ~~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeir~~f~I~nd~ 143 (160)
T 2p1m_A 81 DDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDF 143 (160)
T ss_dssp --------------------CHHHHHHTTCHHHHHHHHHHHHHTTTTCCHHHHHHHTTCCCCC
T ss_pred chhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCC
Confidence 35778899999999999999999999999998888 555555554444433
|
| >1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1 | Back alignment and structure |
|---|
Probab=98.69 E-value=2.5e-08 Score=82.27 Aligned_cols=81 Identities=22% Similarity=0.406 Sum_probs=68.5
Q ss_pred cEEEEecCCcEEeceeeeecccCHHHHHhhcCCCCcCCccceEEcCCCCHHHHHHHhhhhccCc--------------ee
Q psy14726 94 DATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIPGVDASVMTSLIEYAYLRK--------------LH 159 (712)
Q Consensus 94 Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~e~~~~~~i~l~~~~~~~f~~~l~~~Yt~~--------------~~ 159 (712)
-|+|+..||++|.+++.+ |..|.+++.||..++ |... ..|.|++++..+++.+++|+|... -.
T Consensus 5 ~v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~-e~~~-~~Iplp~V~~~iL~kVieyc~~h~~~~~~~~~~~~i~~w~ 81 (99)
T 1hv2_A 5 FVTLVSKDDKEYEISRSA-AMISPTLKAMIEGPF-RESK-GRIELKQFDSHILEKAVEYLNYNLKYSGVSEDDDEIPEFE 81 (99)
T ss_dssp EEEEEETTTEEEEEEHHH-HTTCHHHHHHHHSST-TTCT-TEEEETTSCHHHHHHHHHHHHHHHHHHHHCSSCSSCCCCC
T ss_pred EEEEEecCCCEEEECHHH-HHHhHHHHHHHhccc-ccCC-CceecCCcCHHHHHHHHHHHHHhcccCCCccccccCCCcc
Confidence 378888899999999997 889999999998866 5555 689999999999999999997633 24
Q ss_pred cChhhHHHHHHHhhhcCh
Q psy14726 160 ITEDNVASLLLATDFFCM 177 (712)
Q Consensus 160 i~~~~~~~ll~~A~~~~i 177 (712)
++.+.+.+|+.||++|+|
T Consensus 82 vd~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 82 IPTEMSLELLLAADYLSI 99 (99)
T ss_dssp CCHHHHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHHhCc
Confidence 667788888888888865
|
| >3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A* | Back alignment and structure |
|---|
Probab=98.68 E-value=3.7e-08 Score=90.09 Aligned_cols=98 Identities=17% Similarity=0.423 Sum_probs=72.9
Q ss_pred ccEEEEecCCcEEeceeeeecccCHHHHHhhcCCCC----cCCccceEEcCCCCHHHHHHHhhhhccCc-----------
Q psy14726 93 CDATIVLADNSHFPIHRNILCACSDYFRALFTTSLH----DQEKFSLVEIPGVDASVMTSLIEYAYLRK----------- 157 (712)
Q Consensus 93 ~Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~----e~~~~~~i~l~~~~~~~f~~~l~~~Yt~~----------- 157 (712)
.-|+|+..||++|.+++.+ |..|..++.|+...-. +... ..|.|++++..+|+.|++|++...
T Consensus 7 ~~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~-~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~~~~ 84 (169)
T 3v7d_A 7 SNVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDE-IVMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDD 84 (169)
T ss_dssp CEEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC------------CEEECTTCCHHHHHHHHHHHHHTTTCCCCC-----
T ss_pred CeEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccccccCC-CceeeCCCCHHHHHHHHHHHHHcccCCCccccccc
Confidence 3588988899999999998 7789999999975322 2233 679999999999999999996532
Q ss_pred --------------eecChhhHHHHHHHhhhcChHHHHHHHHHhhcccC
Q psy14726 158 --------------LHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLT 192 (712)
Q Consensus 158 --------------~~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~l 192 (712)
+.++.+.+.+|+.||++|+|..|.++|++.+...+
T Consensus 85 ~~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~~vA~~i 133 (169)
T 3v7d_A 85 SRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMI 133 (169)
T ss_dssp ---CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred ccccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 23455667777777777777777777777764433
|
| >2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B | Back alignment and structure |
|---|
Probab=98.63 E-value=2.9e-08 Score=81.46 Aligned_cols=81 Identities=17% Similarity=0.338 Sum_probs=64.3
Q ss_pred EEEEecCCcEEeceeeeecccCHHHHHhhcC--CCCcCCccceEEcCCCCHHHHHHHhhhhccCc-----------eecC
Q psy14726 95 ATIVLADNSHFPIHRNILCACSDYFRALFTT--SLHDQEKFSLVEIPGVDASVMTSLIEYAYLRK-----------LHIT 161 (712)
Q Consensus 95 v~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~--~~~e~~~~~~i~l~~~~~~~f~~~l~~~Yt~~-----------~~i~ 161 (712)
|+|+..||++|.+++.+ |..|.+++.||.. .+.|+.. ..|.|++++..+++.+++|+|... -.++
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~~~-~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~i~~w~vd 80 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENET-NEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIA 80 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC---------CEEECSSCCHHHHHHHHHHHHHHHHHHSCCSCCCCCCCC
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCcccccC-CceeCCCCCHHHHHHHHHHHHHccccCCCcccCCCcccC
Confidence 67887899999999997 8899999999985 2356666 789999999999999999997633 2467
Q ss_pred hhhHHHHHHHhhhcCh
Q psy14726 162 EDNVASLLLATDFFCM 177 (712)
Q Consensus 162 ~~~~~~ll~~A~~~~i 177 (712)
.+.+.+|+.||++|+|
T Consensus 81 ~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 81 PEIALELLMAANFLDC 96 (96)
T ss_dssp TTTHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhCc
Confidence 7788999999988875
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=98.58 E-value=6.8e-05 Score=77.31 Aligned_cols=250 Identities=9% Similarity=-0.093 Sum_probs=149.3
Q ss_pred CceEEEEECCCCcEEEcc---cCCCCCCCcceEEEEECCEEEEEeecCCCCccceEEEEECCCCcE-EEeCCCCCCccee
Q psy14726 362 TDFVETYDTRADRWVKIE---QVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVW-KEIAPMNFKRCYV 437 (712)
Q Consensus 362 ~~~v~~~d~~~~~W~~~~---~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W-~~~~~~~~~r~~~ 437 (712)
.+.+-.+|+.++++...- ....+.....+.+++.++++|+.... .+.+..+|+.+.+- ..++... ..+
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~-----~~~v~viD~~t~~~~~~i~~~~---~p~ 87 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNN-----SHVIFAIDINTFKEVGRITGFT---SPR 87 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGG-----GTEEEEEETTTCCEEEEEECCS---SEE
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcC-----CCEEEEEECcccEEEEEcCCCC---CCc
Confidence 567899999999886511 01112234446677789999999752 35799999999886 4454332 233
Q ss_pred EEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCcc----ccceeEEEECCEEEEEcccCCCCccCceEEee
Q psy14726 438 STAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVE----RSDASATTLQGKIYITGGFNGHNCLNSCEVYD 512 (712)
Q Consensus 438 ~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~----r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd 512 (712)
.++. .++++|+.... .+.+.++|+.+.+-...-+.+.. ..-..++.-++++||..-. ..+.+.++|
T Consensus 88 ~i~~~~~g~lyv~~~~-----~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~----~~~~v~viD 158 (328)
T 3dsm_A 88 YIHFLSDEKAYVTQIW-----DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWS----YQNRILKID 158 (328)
T ss_dssp EEEEEETTEEEEEEBS-----CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECT----TCCEEEEEE
T ss_pred EEEEeCCCeEEEEECC-----CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCC----CCCEEEEEE
Confidence 4454 78899998642 36799999998875422121110 0223445578999998521 135799999
Q ss_pred CCCCeeEEeCCCCCCCcceEEE-EECCEEEEEcCCCCCCc-----cceEEEEeCCCCcEEEcCCCCCCccceEEEEE--C
Q psy14726 513 PECNQWTLIEPMRHRRSGVSCI-AYHECIYVIGGFNGMSR-----MCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--D 584 (712)
Q Consensus 513 ~~~~~W~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~-----~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~ 584 (712)
+.+++....-+... .-+.++ .-++++|+....+.... ...+.++|+.+.+....-..+....-.+++.. +
T Consensus 159 ~~t~~~~~~i~~g~--~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~ 236 (328)
T 3dsm_A 159 TETDKVVDELTIGI--QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTR 236 (328)
T ss_dssp TTTTEEEEEEECSS--CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTS
T ss_pred CCCCeEEEEEEcCC--CccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCC
Confidence 99988654322211 111222 23688888864221111 36899999999876643333333333445555 5
Q ss_pred CEEEEEcccCCCceeeeEEEEECCCCeEEEccCCCC-cccceEEEEE--cCcceeEe
Q psy14726 585 DMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNI-YRSALSACVI--MGLPNVYD 638 (712)
Q Consensus 585 ~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~-~r~~~~~~~~--~~~~~v~~ 638 (712)
+.+|+..+ .+++||+++++.....-.+. .....+.++- ++.+|+..
T Consensus 237 ~~lyv~~~--------~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 237 DTLYWINN--------DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp CEEEEESS--------SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEE
T ss_pred CEEEEEcc--------EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEc
Confidence 67888754 68999999887632222222 2223333342 56777763
|
| >1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1 | Back alignment and structure |
|---|
Probab=98.29 E-value=8.6e-07 Score=74.63 Aligned_cols=82 Identities=17% Similarity=0.323 Sum_probs=64.7
Q ss_pred cEEEEecCCcEEeceeeeecccCHHHHHhhcC--CCCcCCccceEEcCCCCHHHHHHHhhhhccCc-----------eec
Q psy14726 94 DATIVLADNSHFPIHRNILCACSDYFRALFTT--SLHDQEKFSLVEIPGVDASVMTSLIEYAYLRK-----------LHI 160 (712)
Q Consensus 94 Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~--~~~e~~~~~~i~l~~~~~~~f~~~l~~~Yt~~-----------~~i 160 (712)
-|+|+..||++|.+++.+ |..|..++.|+.. .+.|... ..|.|++|+..+++.+++|++... ..+
T Consensus 18 ~v~L~SsDG~~F~V~~~~-A~~S~tIk~ml~~~~~~~e~~~-~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~i~~w~v 95 (112)
T 1vcb_B 18 YVKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENET-NEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPI 95 (112)
T ss_dssp EEEEECTTSCEEEEEHHH-HHTSHHHHHHSSCC---------CEEECSSCCHHHHHHHHHHHHHHHHHSSCSSCCCCCCC
T ss_pred EEEEEcCCCCEEEECHHH-HHHhHHHHHHHHhcCCcccccC-CceeCCCCCHHHHHHHHHHHHHhhhccCCcCCCCCccc
Confidence 488887899999999994 6789999999985 2345555 689999999999999999996532 257
Q ss_pred ChhhHHHHHHHhhhcCh
Q psy14726 161 TEDNVASLLLATDFFCM 177 (712)
Q Consensus 161 ~~~~~~~ll~~A~~~~i 177 (712)
+.+.+.+|+.||++|+|
T Consensus 96 d~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 96 APEIALELLMAANFLDC 112 (112)
T ss_dssp CHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHhCc
Confidence 77889999999998875
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=98.23 E-value=0.00031 Score=72.26 Aligned_cols=232 Identities=10% Similarity=-0.054 Sum_probs=136.1
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEE-cccCCCCCCCcceEEEE-ECCEEEEEeecCCCCccceEEEEECCCCcEE
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVK-IEQVDPMGPRAYHGTAV-IGYNIYVIGGFDGNEYYNSCRCFNAVTKVWK 425 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~-~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~ 425 (712)
+.+|+... ..+.+..+|+.+.+-.. ++. ....+.+++ -++++|+.... ...+.++|+.+++-.
T Consensus 54 ~~lyv~~~-----~~~~v~viD~~t~~~~~~i~~-----~~~p~~i~~~~~g~lyv~~~~-----~~~v~~iD~~t~~~~ 118 (328)
T 3dsm_A 54 GIGWIVVN-----NSHVIFAIDINTFKEVGRITG-----FTSPRYIHFLSDEKAYVTQIW-----DYRIFIINPKTYEIT 118 (328)
T ss_dssp TEEEEEEG-----GGTEEEEEETTTCCEEEEEEC-----CSSEEEEEEEETTEEEEEEBS-----CSEEEEEETTTTEEE
T ss_pred CEEEEEEc-----CCCEEEEEECcccEEEEEcCC-----CCCCcEEEEeCCCeEEEEECC-----CCeEEEEECCCCeEE
Confidence 45565543 13568899999887643 321 223345555 58899998743 357999999998864
Q ss_pred EeCCCCCC----cceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEE-ECCEEEEEcccC
Q psy14726 426 EIAPMNFK----RCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATT-LQGKIYITGGFN 500 (712)
Q Consensus 426 ~~~~~~~~----r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~ 500 (712)
..-+.... .....++..++++||..- ...+.+.++|+.+.+....-+. +..-+.++. -+|++|+....+
T Consensus 119 ~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~----~~~~~v~viD~~t~~~~~~i~~--g~~p~~i~~~~dG~l~v~~~~~ 192 (328)
T 3dsm_A 119 GYIECPDMDMESGSTEQMVQYGKYVYVNCW----SYQNRILKIDTETDKVVDELTI--GIQPTSLVMDKYNKMWTITDGG 192 (328)
T ss_dssp EEEECTTCCTTTCBCCCEEEETTEEEEEEC----TTCCEEEEEETTTTEEEEEEEC--SSCBCCCEECTTSEEEEEBCCB
T ss_pred EEEEcCCccccCCCcceEEEECCEEEEEcC----CCCCEEEEEECCCCeEEEEEEc--CCCccceEEcCCCCEEEEECCC
Confidence 32122210 022344557899999842 1136799999999876433222 111122222 268988876422
Q ss_pred CCCc-----cCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCC
Q psy14726 501 GHNC-----LNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYN 573 (712)
Q Consensus 501 ~~~~-----~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~ 573 (712)
.... .+.+.++|+.+++....-.++....-..++.. ++.+|+..+ .++++|+.+.+.....-.+.
T Consensus 193 ~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--------~v~~~d~~t~~~~~~~~~~~ 264 (328)
T 3dsm_A 193 YEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--------DIWRMPVEADRVPVRPFLEF 264 (328)
T ss_dssp CTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--------SEEEEETTCSSCCSSCSBCC
T ss_pred ccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--------EEEEEECCCCceeeeeeecC
Confidence 1111 36899999999986644334433333344444 567888753 78999998877532222222
Q ss_pred -CccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCC
Q psy14726 574 -PRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKT 609 (712)
Q Consensus 574 -~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~ 609 (712)
...-.++++- ++.||+....+- .....|.+||++.
T Consensus 265 ~~~~p~gi~vdp~~g~lyva~~~~y-~~~~~V~v~d~~g 302 (328)
T 3dsm_A 265 RDTKYYGLTVNPNNGEVYVADAIDY-QQQGIVYRYSPQG 302 (328)
T ss_dssp CSSCEEEEEECTTTCCEEEEECTTS-SSEEEEEEECTTC
T ss_pred CCCceEEEEEcCCCCeEEEEccccc-ccCCEEEEECCCC
Confidence 2333445553 688999862211 1135799999983
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=98.22 E-value=0.00046 Score=66.68 Aligned_cols=185 Identities=13% Similarity=0.057 Sum_probs=125.1
Q ss_pred CcceEEEEECCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeec
Q psy14726 387 RAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNY 466 (712)
Q Consensus 387 r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~ 466 (712)
-.-+++.+.++.+|+..|..+ .+.+..+|+.+++-..--+++..-.+.+++..+++||+.... .+.+++||+
T Consensus 21 ~ftqGL~~~~~~LyestG~~g---~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~-----~~~v~v~D~ 92 (243)
T 3mbr_X 21 AFTEGLFYLRGHLYESTGETG---RSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWR-----NHEGFVYDL 92 (243)
T ss_dssp CCEEEEEEETTEEEEEECCTT---SCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS-----SSEEEEEET
T ss_pred cccccEEEECCEEEEECCCCC---CceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEee-----CCEEEEEEC
Confidence 344578888999999999654 357899999999987766777777888899999999998543 368999999
Q ss_pred CCCceEEcccCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCeeEE-eC--CCCCCCc-ceEEEEECCEEEE
Q psy14726 467 TENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTL-IE--PMRHRRS-GVSCIAYHECIYV 542 (712)
Q Consensus 467 ~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-~~--~~p~~r~-~~~~~~~~~~iyv 542 (712)
.+.+ .+...+.+..+.+++.-++++|+.-| .+.+..+||++.+-.. +. .-+.+.. -..+...+++||+
T Consensus 93 ~tl~--~~~ti~~~~~Gwglt~dg~~L~vSdg------s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lya 164 (243)
T 3mbr_X 93 ATLT--PRARFRYPGEGWALTSDDSHLYMSDG------TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLA 164 (243)
T ss_dssp TTTE--EEEEEECSSCCCEEEECSSCEEEECS------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEE
T ss_pred CcCc--EEEEEeCCCCceEEeeCCCEEEEECC------CCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEE
Confidence 8765 33344444566777766778998765 2579999999976432 21 1222211 1234556899996
Q ss_pred EcCCCCCCccceEEEEeCCCCc---EEEcCCCC---------CCccceEEEEE--CCEEEEEcc
Q psy14726 543 IGGFNGMSRMCNGEKYNPVTKT---WSQVPDMY---------NPRSNFAIEVI--DDMIFAIGG 592 (712)
Q Consensus 543 ~GG~~~~~~~~~v~~yd~~~~~---W~~~~~~p---------~~r~~~~~~~~--~~~i~v~GG 592 (712)
---. .+.|.+.||++++ |-.++.+. ..-.--++|.. ++++||.|-
T Consensus 165 nvw~-----s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 165 NVWL-----TSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EETT-----TTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EECC-----CCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 5422 4789999999976 44443321 11122344444 578888864
|
| >3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.19 E-value=2.2e-06 Score=71.85 Aligned_cols=93 Identities=19% Similarity=0.298 Sum_probs=75.8
Q ss_pred cEEEEecCCcEEeceeeeecccC-HHHHHhhcCCCC----cCCccceEEcCCCCHHHHHHHhhhhccCceecChh-hHHH
Q psy14726 94 DATIVLADNSHFPIHRNILCACS-DYFRALFTTSLH----DQEKFSLVEIPGVDASVMTSLIEYAYLRKLHITED-NVAS 167 (712)
Q Consensus 94 Dv~l~v~~~~~~~~Hk~vL~~~S-~yF~~mf~~~~~----e~~~~~~i~l~~~~~~~f~~~l~~~Yt~~~~i~~~-~~~~ 167 (712)
=|+|.| +|+.|...+..|+... .+|.+||.+... .... .++.| |-+|..|+.||+|+.+|++.++.+ ....
T Consensus 7 ~v~LNV-GG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~-~~~fi-DRdp~~F~~IL~~lr~g~l~~p~~~~~~~ 83 (107)
T 3drz_A 7 WVRLNV-GGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDET-GAYLI-DRDPTYFGPVLNYLRHGKLVINKDLAEEG 83 (107)
T ss_dssp EEEEEE-TTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTT-SCEEE-CSCHHHHHHHHHHHHHSCCCCCTTSCHHH
T ss_pred EEEEEE-CCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCC-ceEEe-cCChHHHHHHHHHhCCCeeCCCCCCCHHH
Confidence 377888 9999999999998875 578999986421 1123 45666 689999999999999999987654 3578
Q ss_pred HHHHhhhcChHHHHHHHHHhhc
Q psy14726 168 LLLATDFFCMSKAQDLCCDFIK 189 (712)
Q Consensus 168 ll~~A~~~~i~~L~~~c~~~l~ 189 (712)
+++-|.+|+|++|++.|.+-|.
T Consensus 84 l~~Ea~fy~l~~L~~~l~~~i~ 105 (107)
T 3drz_A 84 VLEEAEFYNITSLIKLVKDKIR 105 (107)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHh
Confidence 9999999999999999998664
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=98.18 E-value=0.003 Score=66.00 Aligned_cols=250 Identities=14% Similarity=0.186 Sum_probs=142.9
Q ss_pred cCcCCCceEEEEeecCCCCCCceEEEEECCCC--cEEEcccCCCC-----CCCcceEEEEECCEEEEEeecCCCCccceE
Q psy14726 342 RPRVPHEILFAIGGWSGGSPTDFVETYDTRAD--RWVKIEQVDPM-----GPRAYHGTAVIGYNIYVIGGFDGNEYYNSC 414 (712)
Q Consensus 342 ~pr~~~~~i~~~GG~~~~~~~~~v~~~d~~~~--~W~~~~~~~~~-----~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v 414 (712)
.|-...+.||+... ...+.+||..++ .|..-...... ......+.++.++.||+... ...+
T Consensus 48 ~p~v~~~~v~~~~~------~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------~g~l 115 (376)
T 3q7m_A 48 HPALADNVVYAADR------AGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE------KAQV 115 (376)
T ss_dssp CCEEETTEEEEECT------TSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET------TSEE
T ss_pred ccEEECCEEEEEcC------CCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC------CCEE
Confidence 34444566665432 237899998765 47652111110 12233444556888887543 2469
Q ss_pred EEEECCCCc--EEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCc--eEEcccCCc--cccceeEEE
Q psy14726 415 RCFNAVTKV--WKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQ--WSLIAPMNV--ERSDASATT 488 (712)
Q Consensus 415 ~~yd~~~~~--W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~--~r~~~~~~~ 488 (712)
+++|+.+++ |+.-..-. ...+.++.++.||+..+ ...++.||+.+.+ |+.-...+. .+.....+.
T Consensus 116 ~a~d~~tG~~~W~~~~~~~---~~~~p~~~~~~v~v~~~------~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~ 186 (376)
T 3q7m_A 116 YALNTSDGTVAWQTKVAGE---ALSRPVVSDGLVLIHTS------NGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT 186 (376)
T ss_dssp EEEETTTCCEEEEEECSSC---CCSCCEEETTEEEEECT------TSEEEEEETTTCCEEEEEECCC-----CCCCCCEE
T ss_pred EEEECCCCCEEEEEeCCCc---eEcCCEEECCEEEEEcC------CCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEE
Confidence 999998876 76432211 12223456888888543 2479999998775 876543221 222334455
Q ss_pred ECCEEEEEcccCCCCccCceEEeeCCCCe--eEEeCCCCCCC--------cceEEEEECCEEEEEcCCCCCCccceEEEE
Q psy14726 489 LQGKIYITGGFNGHNCLNSCEVYDPECNQ--WTLIEPMRHRR--------SGVSCIAYHECIYVIGGFNGMSRMCNGEKY 558 (712)
Q Consensus 489 ~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~r--------~~~~~~~~~~~iyv~GG~~~~~~~~~v~~y 558 (712)
.++.+|+ |..+ ..+..||+.+++ |+.-...|... .....+..++.+|+.+. ...+.++
T Consensus 187 ~~~~v~~-g~~~-----g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~------~g~l~~~ 254 (376)
T 3q7m_A 187 AFGAAVV-GGDN-----GRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAY------NGNLTAL 254 (376)
T ss_dssp ETTEEEE-CCTT-----TEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECT------TSCEEEE
T ss_pred ECCEEEE-EcCC-----CEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEec------CcEEEEE
Confidence 5888777 3222 368999988765 87654332211 12233456888888753 2478999
Q ss_pred eCCCC--cEEEcCCCCCCccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCe--EEEccCCCCcccceEEEEEcCcc
Q psy14726 559 NPVTK--TWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDE--WYEATDMNIYRSALSACVIMGLP 634 (712)
Q Consensus 559 d~~~~--~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~~ 634 (712)
|+.+. .|+.-.. ...+.+..++.||+.... ..+..||+.+++ |+.-. ++ .+...+.++.++.+
T Consensus 255 d~~tG~~~w~~~~~-----~~~~~~~~~~~l~~~~~~------g~l~~~d~~tG~~~w~~~~-~~-~~~~~~~~~~~~~l 321 (376)
T 3q7m_A 255 DLRSGQIMWKRELG-----SVNDFIVDGNRIYLVDQN------DRVMALTIDGGVTLWTQSD-LL-HRLLTSPVLYNGNL 321 (376)
T ss_dssp ETTTCCEEEEECCC-----CEEEEEEETTEEEEEETT------CCEEEEETTTCCEEEEECT-TT-TSCCCCCEEETTEE
T ss_pred ECCCCcEEeeccCC-----CCCCceEECCEEEEEcCC------CeEEEEECCCCcEEEeecc-cC-CCcccCCEEECCEE
Confidence 99876 4775421 123455668888887532 258999998875 76531 11 22223345566777
Q ss_pred eeE
Q psy14726 635 NVY 637 (712)
Q Consensus 635 ~v~ 637 (712)
|+.
T Consensus 322 ~v~ 324 (376)
T 3q7m_A 322 VVG 324 (376)
T ss_dssp EEE
T ss_pred EEE
Confidence 765
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=98.05 E-value=0.0025 Score=66.59 Aligned_cols=231 Identities=12% Similarity=0.091 Sum_probs=135.1
Q ss_pred ceEEEEECCCCc--EEEcccCCCCCCCcceEEEEECCEEEEEeecCCCCccceEEEEECCCCc--EEEeCCCCC--Ccce
Q psy14726 363 DFVETYDTRADR--WVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKV--WKEIAPMNF--KRCY 436 (712)
Q Consensus 363 ~~v~~~d~~~~~--W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~~~--~r~~ 436 (712)
..+.++|..+++ |..- ... ......++.++.+|+..+ ...++.||+.+++ |+.-...+. .+..
T Consensus 113 g~l~a~d~~tG~~~W~~~--~~~---~~~~~p~~~~~~v~v~~~------~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~ 181 (376)
T 3q7m_A 113 AQVYALNTSDGTVAWQTK--VAG---EALSRPVVSDGLVLIHTS------NGQLQALNEADGAVKWTVNLDMPSLSLRGE 181 (376)
T ss_dssp SEEEEEETTTCCEEEEEE--CSS---CCCSCCEEETTEEEEECT------TSEEEEEETTTCCEEEEEECCC-----CCC
T ss_pred CEEEEEECCCCCEEEEEe--CCC---ceEcCCEEECCEEEEEcC------CCeEEEEECCCCcEEEEEeCCCCceeecCC
Confidence 468999988664 7652 111 112223445888877543 2469999998886 875433221 1222
Q ss_pred eEEEEECCeEEEEcccCCCCCCceeEEeecCCCc--eEEcccCCccc--------cceeEEEECCEEEEEcccCCCCccC
Q psy14726 437 VSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQ--WSLIAPMNVER--------SDASATTLQGKIYITGGFNGHNCLN 506 (712)
Q Consensus 437 ~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~r--------~~~~~~~~~~~iyv~GG~~~~~~~~ 506 (712)
.+.+..++.||+... ...+..+|+.+.+ |+.-...|... .....+..++.+|+.+. + .
T Consensus 182 ~~~~~~~~~v~~g~~------~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~-~-----g 249 (376)
T 3q7m_A 182 SAPTTAFGAAVVGGD------NGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAY-N-----G 249 (376)
T ss_dssp CCCEEETTEEEECCT------TTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECT-T-----S
T ss_pred CCcEEECCEEEEEcC------CCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEec-C-----c
Confidence 334555788777321 1468999988764 76543333221 22344556888988652 2 3
Q ss_pred ceEEeeCCCCe--eEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCc--EEEcCCCCCCccceEEEE
Q psy14726 507 SCEVYDPECNQ--WTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKT--WSQVPDMYNPRSNFAIEV 582 (712)
Q Consensus 507 ~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~ 582 (712)
.+.++|+.+++ |+.-.. ...+.+..++.||+... ...+.+||+.+.+ |+.-. ++ .+...+.+.
T Consensus 250 ~l~~~d~~tG~~~w~~~~~-----~~~~~~~~~~~l~~~~~------~g~l~~~d~~tG~~~w~~~~-~~-~~~~~~~~~ 316 (376)
T 3q7m_A 250 NLTALDLRSGQIMWKRELG-----SVNDFIVDGNRIYLVDQ------NDRVMALTIDGGVTLWTQSD-LL-HRLLTSPVL 316 (376)
T ss_dssp CEEEEETTTCCEEEEECCC-----CEEEEEEETTEEEEEET------TCCEEEEETTTCCEEEEECT-TT-TSCCCCCEE
T ss_pred EEEEEECCCCcEEeeccCC-----CCCCceEECCEEEEEcC------CCeEEEEECCCCcEEEeecc-cC-CCcccCCEE
Confidence 68999998774 765421 12345666899999764 2468999998765 77642 11 122333455
Q ss_pred ECCEEEEEcccCCCceeeeEEEEECCCCe--EEEccCCCCcccceEEEEEcCcceeE
Q psy14726 583 IDDMIFAIGGFNGVTTIYHVECYDEKTDE--WYEATDMNIYRSALSACVIMGLPNVY 637 (712)
Q Consensus 583 ~~~~i~v~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~~~v~ 637 (712)
.++.||+... + ..+++||+.+++ |.. .++........++.++.+|+.
T Consensus 317 ~~~~l~v~~~-~-----g~l~~~d~~tG~~~~~~--~~~~~~~~~~~~~~~~~l~v~ 365 (376)
T 3q7m_A 317 YNGNLVVGDS-E-----GYLHWINVEDGRFVAQQ--KVDSSGFQTEPVAADGKLLIQ 365 (376)
T ss_dssp ETTEEEEECT-T-----SEEEEEETTTCCEEEEE--ECCTTCBCSCCEEETTEEEEE
T ss_pred ECCEEEEEeC-C-----CeEEEEECCCCcEEEEE--ecCCCcceeCCEEECCEEEEE
Confidence 6888887642 2 258999998876 543 222222333445567777775
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=98.04 E-value=0.00087 Score=65.29 Aligned_cols=183 Identities=12% Similarity=0.003 Sum_probs=119.6
Q ss_pred ceEEEEECCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCC
Q psy14726 389 YHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTE 468 (712)
Q Consensus 389 ~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~ 468 (712)
-.++.+.++.+|+..|..+ .+.+..+|+.+++-..--+++..-.+.+++..+++||+.... .+.+++||+.+
T Consensus 45 tqGL~~~~~~LyestG~~g---~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~-----~~~v~v~D~~t 116 (262)
T 3nol_A 45 TEGFFYRNGYFYESTGLNG---RSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWK-----NGLGFVWNIRN 116 (262)
T ss_dssp EEEEEEETTEEEEEEEETT---EEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS-----SSEEEEEETTT
T ss_pred cceEEEECCEEEEECCCCC---CceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEee-----CCEEEEEECcc
Confidence 3566767999999999654 257899999999976655666666677889999999998543 36899999988
Q ss_pred CceEEcccCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCeeEE-eCC--CCCCCcc-eEEEEECCEEEEEc
Q psy14726 469 NQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTL-IEP--MRHRRSG-VSCIAYHECIYVIG 544 (712)
Q Consensus 469 ~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-~~~--~p~~r~~-~~~~~~~~~iyv~G 544 (712)
.+- +...+.+-.+.+++.-++++|+.-| .+.++.+||++.+-.. +.. -+.+... ..+...+++||+--
T Consensus 117 ~~~--~~ti~~~~eG~glt~dg~~L~~SdG------s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~ 188 (262)
T 3nol_A 117 LRQ--VRSFNYDGEGWGLTHNDQYLIMSDG------TPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANV 188 (262)
T ss_dssp CCE--EEEEECSSCCCCEEECSSCEEECCS------SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEE
T ss_pred CcE--EEEEECCCCceEEecCCCEEEEECC------CCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEE
Confidence 764 3333334466666665777888654 2579999999876432 221 1112111 12444589999643
Q ss_pred CCCCCCccceEEEEeCCCCcE---EEcCCCCC--------CccceEEEEE--CCEEEEEcc
Q psy14726 545 GFNGMSRMCNGEKYNPVTKTW---SQVPDMYN--------PRSNFAIEVI--DDMIFAIGG 592 (712)
Q Consensus 545 G~~~~~~~~~v~~yd~~~~~W---~~~~~~p~--------~r~~~~~~~~--~~~i~v~GG 592 (712)
- ..+.|.+.||++.+= -.++.+.. .-.-.++|.. ++++||.|-
T Consensus 189 w-----~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 189 W-----QTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp T-----TSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred c-----cCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 2 247899999999863 33432211 1122445554 577888764
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=97.87 E-value=0.0011 Score=63.87 Aligned_cols=158 Identities=15% Similarity=0.073 Sum_probs=111.5
Q ss_pred cceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEECCEEEEEcccCCCCccCceEEeeC
Q psy14726 434 RCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDP 513 (712)
Q Consensus 434 r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~ 513 (712)
-+-.++...++.+|+..|..+. +.+.++|+.+.+=..--+++..-.+.+++..+++||+....+ +.+++||+
T Consensus 21 ~ftqGL~~~~~~LyestG~~g~---S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~-----~~v~v~D~ 92 (243)
T 3mbr_X 21 AFTEGLFYLRGHLYESTGETGR---SSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRN-----HEGFVYDL 92 (243)
T ss_dssp CCEEEEEEETTEEEEEECCTTS---CEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS-----SEEEEEET
T ss_pred cccccEEEECCEEEEECCCCCC---ceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeC-----CEEEEEEC
Confidence 4456788889999999886543 679999999998766667777667788888899999986543 67999999
Q ss_pred CCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEE-c--CCCCCCccc-eEEEEECCEEEE
Q psy14726 514 ECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQ-V--PDMYNPRSN-FAIEVIDDMIFA 589 (712)
Q Consensus 514 ~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-~--~~~p~~r~~-~~~~~~~~~i~v 589 (712)
++.+- +...+.+..+.+++.-+++||+.-| .+.++.+||++.+-.. + ...+.+... -.+...+++||+
T Consensus 93 ~tl~~--~~ti~~~~~Gwglt~dg~~L~vSdg------s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lya 164 (243)
T 3mbr_X 93 ATLTP--RARFRYPGEGWALTSDDSHLYMSDG------TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLA 164 (243)
T ss_dssp TTTEE--EEEEECSSCCCEEEECSSCEEEECS------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEE
T ss_pred CcCcE--EEEEeCCCCceEEeeCCCEEEEECC------CCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEE
Confidence 88764 3333334466777777788999876 3689999999865432 2 122222111 234556899886
Q ss_pred EcccCCCceeeeEEEEECCCCeE
Q psy14726 590 IGGFNGVTTIYHVECYDEKTDEW 612 (712)
Q Consensus 590 ~GG~~~~~~~~~v~~yd~~~~~W 612 (712)
--- ..+++.+.||++++=
T Consensus 165 nvw-----~s~~I~vIDp~tG~V 182 (243)
T 3mbr_X 165 NVW-----LTSRIARIDPASGKV 182 (243)
T ss_dssp EET-----TTTEEEEECTTTCBE
T ss_pred EEC-----CCCeEEEEECCCCCE
Confidence 532 235899999999753
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=97.77 E-value=0.0033 Score=61.90 Aligned_cols=186 Identities=14% Similarity=0.040 Sum_probs=116.9
Q ss_pred ceEEEEEC-CEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecC
Q psy14726 389 YHGTAVIG-YNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYT 467 (712)
Q Consensus 389 ~~~~~~~~-~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~ 467 (712)
-+++++.+ +.+|+..|..+ .+.+..+|+.+++-..--+++......+++..+++||+..- ..+.+.+||+.
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~---~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~-----~~~~v~viD~~ 94 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYG---RSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVW-----LKNIGFIYDRR 94 (266)
T ss_dssp EEEEEECSTTEEEEEECSTT---TCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEET-----TCSEEEEEETT
T ss_pred cccEEEeCCCeEEEECCCCC---CCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEe-----cCCEEEEEECC
Confidence 36777765 89999877422 36799999999997655455555566778888999999854 23679999998
Q ss_pred CCceEEcccCCcc-ccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCeeE-EeC--CCCCCC-cceEEEEECCEEEE
Q psy14726 468 ENQWSLIAPMNVE-RSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWT-LIE--PMRHRR-SGVSCIAYHECIYV 542 (712)
Q Consensus 468 ~~~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~-~~~--~~p~~r-~~~~~~~~~~~iyv 542 (712)
+.+ .+..++.+ ..+.+.+.-++++|+.-| .+.+..+|+++.+-. .+. ..+.+. .-..+...++++|+
T Consensus 95 t~~--v~~~i~~g~~~g~glt~Dg~~l~vs~g------s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyv 166 (266)
T 2iwa_A 95 TLS--NIKNFTHQMKDGWGLATDGKILYGSDG------TSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWA 166 (266)
T ss_dssp TTE--EEEEEECCSSSCCEEEECSSSEEEECS------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEE
T ss_pred CCc--EEEEEECCCCCeEEEEECCCEEEEECC------CCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEE
Confidence 764 33333333 333444444667998754 367999999987632 222 111111 11233444889997
Q ss_pred EcCCCCCCccceEEEEeCCCCc---EEEcCCC---------CCCccceEEEEE--CCEEEEEcccCC
Q psy14726 543 IGGFNGMSRMCNGEKYNPVTKT---WSQVPDM---------YNPRSNFAIEVI--DDMIFAIGGFNG 595 (712)
Q Consensus 543 ~GG~~~~~~~~~v~~yd~~~~~---W~~~~~~---------p~~r~~~~~~~~--~~~i~v~GG~~~ 595 (712)
--.. .+.|.+.|+.+++ |-.++.+ +..-.-.+++.. ++++||.|+..+
T Consensus 167 n~~~-----~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~ 228 (266)
T 2iwa_A 167 NIWQ-----TDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWP 228 (266)
T ss_dssp EETT-----SSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCS
T ss_pred ecCC-----CCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCC
Confidence 6532 4789999999875 3333211 111122455555 568999987653
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=97.72 E-value=0.0025 Score=62.03 Aligned_cols=153 Identities=10% Similarity=-0.006 Sum_probs=104.9
Q ss_pred ceEEEEECCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCC
Q psy14726 389 YHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTE 468 (712)
Q Consensus 389 ~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~ 468 (712)
-.++...++.||+..|..+ .+..+|+.+++-..-- ++..-.+.+++..+++||+.... .+.+++||+.+
T Consensus 57 tqGL~~~~~~Ly~stG~~g-----~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~-----~~~v~V~D~~T 125 (268)
T 3nok_A 57 TQGLVFHQGHFFESTGHQG-----TLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWT-----EGLLFTWSGMP 125 (268)
T ss_dssp EEEEEEETTEEEEEETTTT-----EEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESS-----SCEEEEEETTT
T ss_pred cceEEEECCEEEEEcCCCC-----EEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEcc-----CCEEEEEECCc
Confidence 3677777999999999643 3899999999864333 55555667788899999998543 36899999987
Q ss_pred CceEEcccCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCeeEE-eC--CCCCCCc-ceEEEEECCEEEEEc
Q psy14726 469 NQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTL-IE--PMRHRRS-GVSCIAYHECIYVIG 544 (712)
Q Consensus 469 ~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-~~--~~p~~r~-~~~~~~~~~~iyv~G 544 (712)
.+- +...+.+..+.+++.-++++|+.-| .+.+..+|+++.+-.. +. .-+.+.. -..+...+|+||+--
T Consensus 126 l~~--~~ti~~~~eGwGLt~Dg~~L~vSdG------s~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanv 197 (268)
T 3nok_A 126 PQR--ERTTRYSGEGWGLCYWNGKLVRSDG------GTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANI 197 (268)
T ss_dssp TEE--EEEEECSSCCCCEEEETTEEEEECS------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEE
T ss_pred CcE--EEEEeCCCceeEEecCCCEEEEECC------CCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEE
Confidence 654 3333334456777777889999865 2579999999976432 22 1111111 123445589999643
Q ss_pred CCCCCCccceEEEEeCCCCcE
Q psy14726 545 GFNGMSRMCNGEKYNPVTKTW 565 (712)
Q Consensus 545 G~~~~~~~~~v~~yd~~~~~W 565 (712)
+ ..+.|.+.||++.+=
T Consensus 198 -w----~s~~I~vIDp~TG~V 213 (268)
T 3nok_A 198 -W----HSSDVLEIDPATGTV 213 (268)
T ss_dssp -T----TCSEEEEECTTTCBE
T ss_pred -C----CCCeEEEEeCCCCcE
Confidence 1 147899999999853
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=97.62 E-value=0.0031 Score=65.98 Aligned_cols=226 Identities=14% Similarity=0.107 Sum_probs=122.0
Q ss_pred eEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE--CCEEEEEeecCCCCccceEEEEECCCCcEEE
Q psy14726 349 ILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 426 (712)
Q Consensus 349 ~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 426 (712)
.+++.|+. ...+..+|..+++-...-.. ...-.++++. +..+|+.|+.+ ..+..+|..+++...
T Consensus 3 ~l~vs~~~-----d~~v~v~d~~~~~~~~~~~~----~~~~~~~~~s~dg~~l~~~~~~d-----~~i~v~d~~~~~~~~ 68 (391)
T 1l0q_A 3 FAYIANSE-----SDNISVIDVTSNKVTATIPV----GSNPMGAVISPDGTKVYVANAHS-----NDVSIIDTATNNVIA 68 (391)
T ss_dssp EEEEEETT-----TTEEEEEETTTTEEEEEEEC----SSSEEEEEECTTSSEEEEEEGGG-----TEEEEEETTTTEEEE
T ss_pred EEEEEcCC-----CCEEEEEECCCCeEEEEeec----CCCcceEEECCCCCEEEEECCCC-----CeEEEEECCCCeEEE
Confidence 45666653 24688999888765542111 1122344443 44677776543 468999999887654
Q ss_pred eCCCCCCcceeEEEEE-CC-eEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE-C-CEEEEEcccCCC
Q psy14726 427 IAPMNFKRCYVSTAVH-HD-VIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL-Q-GKIYITGGFNGH 502 (712)
Q Consensus 427 ~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~-~~iyv~GG~~~~ 502 (712)
.-..+. .-.+++.. ++ .||+.|..+ ..+.+||+.+++....-.. ...-.+++.. + ..+|+.++.+
T Consensus 69 ~~~~~~--~v~~~~~spdg~~l~~~~~~~-----~~v~v~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~-- 137 (391)
T 1l0q_A 69 TVPAGS--SPQGVAVSPDGKQVYVTNMAS-----STLSVIDTTSNTVAGTVKT--GKSPLGLALSPDGKKLYVTNNGD-- 137 (391)
T ss_dssp EEECSS--SEEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEEC--SSSEEEEEECTTSSEEEEEETTT--
T ss_pred EEECCC--CccceEECCCCCEEEEEECCC-----CEEEEEECCCCeEEEEEeC--CCCcceEEECCCCCEEEEEeCCC--
Confidence 433322 22333333 34 566665422 5699999998875433222 1111222222 3 3577777544
Q ss_pred CccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEE
Q psy14726 503 NCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAI 580 (712)
Q Consensus 503 ~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~ 580 (712)
..+..||..+++....-... ..-..++.. ++.||+.++.+ ..+..||+.+.+....... .....++
T Consensus 138 ---~~v~~~d~~~~~~~~~~~~~--~~~~~~~~~~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~~~~~--~~~~~~~ 205 (391)
T 1l0q_A 138 ---KTVSVINTVTKAVINTVSVG--RSPKGIAVTPDGTKVYVANFDS-----MSISVIDTVTNSVIDTVKV--EAAPSGI 205 (391)
T ss_dssp ---TEEEEEETTTTEEEEEEECC--SSEEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEEC--SSEEEEE
T ss_pred ---CEEEEEECCCCcEEEEEecC--CCcceEEECCCCCEEEEEeCCC-----CEEEEEECCCCeEEEEEec--CCCccce
Confidence 47999999888765443222 112233332 34677776643 5689999988765443222 1112222
Q ss_pred EEE-CCEEEEEcccCCCceeeeEEEEECCCCeEE
Q psy14726 581 EVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEWY 613 (712)
Q Consensus 581 ~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 613 (712)
+.. +++.+++++.+. ....+.+||+.+.+-.
T Consensus 206 ~~~~~g~~l~~~~~~~--~~~~v~~~d~~~~~~~ 237 (391)
T 1l0q_A 206 AVNPEGTKAYVTNVDK--YFNTVSMIDTGTNKIT 237 (391)
T ss_dssp EECTTSSEEEEEEECS--SCCEEEEEETTTTEEE
T ss_pred EECCCCCEEEEEecCc--CCCcEEEEECCCCeEE
Confidence 222 444444443211 1236899999887543
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.61 E-value=0.0064 Score=62.88 Aligned_cols=242 Identities=10% Similarity=0.163 Sum_probs=126.5
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-C--CEEEEEeecCCCCccceEEEEECCCCcE
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-G--YNIYVIGGFDGNEYYNSCRCFNAVTKVW 424 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~--~~lyv~GG~~~~~~~~~v~~yd~~~~~W 424 (712)
+..++.|+.+ ..+..||.....+..+...... ...-.+++.. + +.+++.|+.+ ..+..||..+++|
T Consensus 23 ~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~ 91 (379)
T 3jrp_A 23 GKRLATCSSD-----KTIKIFEVEGETHKLIDTLTGH-EGPVWRVDWAHPKFGTILASCSYD-----GKVLIWKEENGRW 91 (379)
T ss_dssp SSEEEEEETT-----SCEEEEEEETTEEEEEEEECCC-SSCEEEEEECCGGGCSEEEEEETT-----SCEEEEEEETTEE
T ss_pred CCEEEEEECC-----CcEEEEecCCCcceeeeEecCC-CCcEEEEEeCCCCCCCEEEEeccC-----CEEEEEEcCCCce
Confidence 3455666542 3477777765555543211111 1112233332 2 6777777754 3588999999988
Q ss_pred EEeCCCCCCcceeEEEEE--C--CeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE-----------
Q psy14726 425 KEIAPMNFKRCYVSTAVH--H--DVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL----------- 489 (712)
Q Consensus 425 ~~~~~~~~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~----------- 489 (712)
..+..+.........+.+ + +.+++.|+.+ ..+..||..+........+........+..+
T Consensus 92 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 166 (379)
T 3jrp_A 92 SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD-----GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEH 166 (379)
T ss_dssp EEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC-------
T ss_pred eEeeeecCCCcceEEEEeCCCCCCCEEEEecCC-----CcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccc
Confidence 766554433233333332 3 5677777654 4688888877632111111111111112222
Q ss_pred ----CCEEEEEcccCCCCccCceEEeeCCCC--eeEEeCCCCCCCcceEEEEE--C---CEEEEEcCCCCCCccceEEEE
Q psy14726 490 ----QGKIYITGGFNGHNCLNSCEVYDPECN--QWTLIEPMRHRRSGVSCIAY--H---ECIYVIGGFNGMSRMCNGEKY 558 (712)
Q Consensus 490 ----~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~---~~iyv~GG~~~~~~~~~v~~y 558 (712)
++.+++.|+.++ .+..||..+. .|..+..+.........+.+ + +.+++.|+.+ ..+..|
T Consensus 167 ~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d-----g~i~iw 236 (379)
T 3jrp_A 167 NGTKESRKFVTGGADN-----LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQD-----RTCIIW 236 (379)
T ss_dssp ---CTTCEEEEEETTS-----CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETT-----SCEEEE
T ss_pred cCCCCCCEEEEEeCCC-----eEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCC-----CEEEEE
Confidence 367788887664 4777776543 46555444332222233333 3 6788888765 357788
Q ss_pred eCCCCc----EEEcCCCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECC-CCeEEEccCCCC
Q psy14726 559 NPVTKT----WSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEK-TDEWYEATDMNI 620 (712)
Q Consensus 559 d~~~~~----W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~-~~~W~~~~~~p~ 620 (712)
|..+.. ............-.+++.. ++..+++|+.++ .+.+||.. .+.|..+..+..
T Consensus 237 d~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg-----~i~iw~~~~~~~~~~~~~~~~ 299 (379)
T 3jrp_A 237 TQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDN-----KVTLWKENLEGKWEPAGEVHQ 299 (379)
T ss_dssp EESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSS-----SEEEEEEEETTEEEEEEEEC-
T ss_pred eCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCC-----cEEEEeCCCCCccccccceec
Confidence 877652 2222221122222222222 677777877655 46667665 578887755444
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=97.61 E-value=0.0017 Score=63.18 Aligned_cols=158 Identities=13% Similarity=0.060 Sum_probs=106.1
Q ss_pred ceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCC
Q psy14726 435 CYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPE 514 (712)
Q Consensus 435 ~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~ 514 (712)
+..++...++.+|+..|..+. +.+.++|+.+.+=..--+++..-.+.+++..+++||+....+ +.+++||++
T Consensus 44 ftqGL~~~~~~LyestG~~g~---S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~-----~~v~v~D~~ 115 (262)
T 3nol_A 44 FTEGFFYRNGYFYESTGLNGR---SSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKN-----GLGFVWNIR 115 (262)
T ss_dssp EEEEEEEETTEEEEEEEETTE---EEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS-----SEEEEEETT
T ss_pred ccceEEEECCEEEEECCCCCC---ceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeC-----CEEEEEECc
Confidence 335666779999999986543 579999999998655556665555667788899999996543 679999998
Q ss_pred CCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEE-cCC--CCCCccce-EEEEECCEEEEE
Q psy14726 515 CNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQ-VPD--MYNPRSNF-AIEVIDDMIFAI 590 (712)
Q Consensus 515 ~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-~~~--~p~~r~~~-~~~~~~~~i~v~ 590 (712)
+.+-. ..++.+-.+.+++.-++++|+.-| .+.++.+||.+.+-.. +.- ...+.... .+...+++||+-
T Consensus 116 t~~~~--~ti~~~~eG~glt~dg~~L~~SdG------s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan 187 (262)
T 3nol_A 116 NLRQV--RSFNYDGEGWGLTHNDQYLIMSDG------TPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFAN 187 (262)
T ss_dssp TCCEE--EEEECSSCCCCEEECSSCEEECCS------SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEE
T ss_pred cCcEE--EEEECCCCceEEecCCCEEEEECC------CCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEE
Confidence 87643 223333356667766778888765 3679999999865332 211 11111111 244558998864
Q ss_pred cccCCCceeeeEEEEECCCCeEE
Q psy14726 591 GGFNGVTTIYHVECYDEKTDEWY 613 (712)
Q Consensus 591 GG~~~~~~~~~v~~yd~~~~~W~ 613 (712)
- + ..+.|.+.||++++=.
T Consensus 188 ~-w----~~~~I~vIDp~tG~V~ 205 (262)
T 3nol_A 188 V-W----QTNKIVRIDPETGKVT 205 (262)
T ss_dssp E-T----TSSEEEEECTTTCBEE
T ss_pred E-c----cCCeEEEEECCCCcEE
Confidence 2 1 2358999999998643
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=97.52 E-value=0.077 Score=52.55 Aligned_cols=217 Identities=9% Similarity=-0.003 Sum_probs=118.6
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV 441 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~ 441 (712)
..+..||+. +.+....... ....-+++++. ++.+|+.... ...+++||+. +++..+........-++++.
T Consensus 36 ~~v~~~d~~-~~~~~~~~~~--~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~ 106 (299)
T 2z2n_A 36 NMISCINLD-GKITEYPLPT--PDAKVMCLTISSDGEVWFTENA-----ANKIGRITKK-GIIKEYTLPNPDSAPYGITE 106 (299)
T ss_dssp TEEEEECTT-CCEEEEECSS--TTCCEEEEEECTTSCEEEEETT-----TTEEEEECTT-SCEEEEECSSTTCCEEEEEE
T ss_pred CcEEEEcCC-CCeEEecCCc--ccCceeeEEECCCCCEEEeCCC-----CCeEEEECCC-CcEEEEeCCCcCCCceeeEE
Confidence 468889988 7776543211 11223344443 6778877532 2358999986 55554432112223344444
Q ss_pred E-CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCee
Q psy14726 442 H-HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQW 518 (712)
Q Consensus 442 ~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 518 (712)
. +|++|+.+.. ...+.++|+ +.+...... +..........+ ++++|+.... ...+.+||+ +++.
T Consensus 107 ~~~g~l~v~~~~-----~~~i~~~d~-~g~~~~~~~-~~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~-~g~~ 173 (299)
T 2z2n_A 107 GPNGDIWFTEMN-----GNRIGRITD-DGKIREYEL-PNKGSYPSFITLGSDNALWFTENQ-----NNAIGRITE-SGDI 173 (299)
T ss_dssp CTTSCEEEEETT-----TTEEEEECT-TCCEEEEEC-SSTTCCEEEEEECTTSCEEEEETT-----TTEEEEECT-TCCE
T ss_pred CCCCCEEEEecC-----CceEEEECC-CCCEEEecC-CCCCCCCceEEEcCCCCEEEEeCC-----CCEEEEEcC-CCcE
Confidence 3 5789886532 246899998 666554422 211112222333 5789886532 246899999 7777
Q ss_pred EEeCCCCCCCcc-eEEEEE-CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccc-eEEEEE-CCEEEEEcccC
Q psy14726 519 TLIEPMRHRRSG-VSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSN-FAIEVI-DDMIFAIGGFN 594 (712)
Q Consensus 519 ~~~~~~p~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~-~~~~~~-~~~i~v~GG~~ 594 (712)
.... .+..... .+++.. ++.||+.... ...+.+||+ ++++..... +..... .+++.- ++.+|+....+
T Consensus 174 ~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~~~-~~~~~~~~~i~~~~~g~l~v~~~~~ 245 (299)
T 2z2n_A 174 TEFK-IPTPASGPVGITKGNDDALWFVEII-----GNKIGRITT-SGEITEFKI-PTPNARPHAITAGAGIDLWFTEWGA 245 (299)
T ss_dssp EEEE-CSSTTCCEEEEEECTTSSEEEEETT-----TTEEEEECT-TCCEEEEEC-SSTTCCEEEEEECSTTCEEEEETTT
T ss_pred EEee-CCCCCCcceeEEECCCCCEEEEccC-----CceEEEECC-CCcEEEEEC-CCCCCCceeEEECCCCCEEEeccCC
Confidence 6542 1211122 233332 4778887642 357899999 777766422 211222 233332 57788774221
Q ss_pred CCceeeeEEEEECCCCeEEEc
Q psy14726 595 GVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 595 ~~~~~~~v~~yd~~~~~W~~~ 615 (712)
+.+.+||+ +++....
T Consensus 246 -----~~i~~~d~-~g~~~~~ 260 (299)
T 2z2n_A 246 -----NKIGRLTS-NNIIEEY 260 (299)
T ss_dssp -----TEEEEEET-TTEEEEE
T ss_pred -----ceEEEECC-CCceEEE
Confidence 36889998 4555444
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=97.47 E-value=0.0077 Score=62.93 Aligned_cols=224 Identities=14% Similarity=0.105 Sum_probs=120.8
Q ss_pred eEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE--CCEEEEEeecCCCCccceEEEEECCCCcEEE
Q psy14726 349 ILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 426 (712)
Q Consensus 349 ~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 426 (712)
.+++.|+.+ ..+..+|..+++....- .. +..-.+++.. +..||+.|.. ...++.||+.+++...
T Consensus 45 ~l~~~~~~d-----~~i~v~d~~~~~~~~~~--~~--~~~v~~~~~spdg~~l~~~~~~-----~~~v~v~d~~~~~~~~ 110 (391)
T 1l0q_A 45 KVYVANAHS-----NDVSIIDTATNNVIATV--PA--GSSPQGVAVSPDGKQVYVTNMA-----SSTLSVIDTTSNTVAG 110 (391)
T ss_dssp EEEEEEGGG-----TEEEEEETTTTEEEEEE--EC--SSSEEEEEECTTSSEEEEEETT-----TTEEEEEETTTTEEEE
T ss_pred EEEEECCCC-----CeEEEEECCCCeEEEEE--EC--CCCccceEECCCCCEEEEEECC-----CCEEEEEECCCCeEEE
Confidence 455555432 46888999888765421 11 1122344444 4456665542 2469999999887654
Q ss_pred eCCCCCCcceeEEEEE-CC-eEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE---CCEEEEEcccCC
Q psy14726 427 IAPMNFKRCYVSTAVH-HD-VIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL---QGKIYITGGFNG 501 (712)
Q Consensus 427 ~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~ 501 (712)
..... ..-.+++.. ++ .+|+.++.+ ..+.+||+.+.+....-... .. ...+.+ +..+|+.++.+
T Consensus 111 ~~~~~--~~~~~~~~s~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~~~~~~--~~-~~~~~~~~dg~~l~~~~~~~- 179 (391)
T 1l0q_A 111 TVKTG--KSPLGLALSPDGKKLYVTNNGD-----KTVSVINTVTKAVINTVSVG--RS-PKGIAVTPDGTKVYVANFDS- 179 (391)
T ss_dssp EEECS--SSEEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEECC--SS-EEEEEECTTSSEEEEEETTT-
T ss_pred EEeCC--CCcceEEECCCCCEEEEEeCCC-----CEEEEEECCCCcEEEEEecC--CC-cceEEECCCCCEEEEEeCCC-
Confidence 33222 222344443 34 576776532 57999999888765432221 11 122233 34677776544
Q ss_pred CCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CC-EEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceE
Q psy14726 502 HNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HE-CIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFA 579 (712)
Q Consensus 502 ~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~ 579 (712)
..+..||..+++....-... ..-.+++.. ++ .||+.+. +. ....+..||+.+.+-...- +......+
T Consensus 180 ----~~v~~~d~~~~~~~~~~~~~--~~~~~~~~~~~g~~l~~~~~-~~--~~~~v~~~d~~~~~~~~~~--~~~~~~~~ 248 (391)
T 1l0q_A 180 ----MSISVIDTVTNSVIDTVKVE--AAPSGIAVNPEGTKAYVTNV-DK--YFNTVSMIDTGTNKITARI--PVGPDPAG 248 (391)
T ss_dssp ----TEEEEEETTTTEEEEEEECS--SEEEEEEECTTSSEEEEEEE-CS--SCCEEEEEETTTTEEEEEE--ECCSSEEE
T ss_pred ----CEEEEEECCCCeEEEEEecC--CCccceEECCCCCEEEEEec-Cc--CCCcEEEEECCCCeEEEEE--ecCCCccE
Confidence 46899999888654433221 122222222 34 5655542 10 1367899999876533221 11222223
Q ss_pred EEEE--CCEEEEEcccCCCceeeeEEEEECCCCeEE
Q psy14726 580 IEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEWY 613 (712)
Q Consensus 580 ~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 613 (712)
++.. +..+|+.++.++ .+.+||+.+++-.
T Consensus 249 ~~~s~dg~~l~~s~~~d~-----~v~v~d~~~~~~~ 279 (391)
T 1l0q_A 249 IAVTPDGKKVYVALSFXN-----TVSVIDTATNTIT 279 (391)
T ss_dssp EEECTTSSEEEEEETTTT-----EEEEEETTTTEEE
T ss_pred EEEccCCCEEEEEcCCCC-----EEEEEECCCCcEE
Confidence 3333 346777766543 6889999887654
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=97.41 E-value=0.013 Score=57.48 Aligned_cols=155 Identities=16% Similarity=0.102 Sum_probs=100.1
Q ss_pred eeEEEEEC-CeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCC
Q psy14726 436 YVSTAVHH-DVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPE 514 (712)
Q Consensus 436 ~~~~~~~~-~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~ 514 (712)
-++++..+ +.+|+..|..+ .+.+.++|+.+++=...-+++....+.+.+..++++|+..-.+ +.+.+||+.
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~---~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~-----~~v~viD~~ 94 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYG---RSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLK-----NIGFIYDRR 94 (266)
T ss_dssp EEEEEECSTTEEEEEECSTT---TCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTC-----SEEEEEETT
T ss_pred cccEEEeCCCeEEEECCCCC---CCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecC-----CEEEEEECC
Confidence 46777666 89999877432 3689999999988554444544445566777789999986433 679999998
Q ss_pred CCeeEEeCCCCCC-CcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEE-EcC--CCCCCc-cceEEEEECCEEEE
Q psy14726 515 CNQWTLIEPMRHR-RSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWS-QVP--DMYNPR-SNFAIEVIDDMIFA 589 (712)
Q Consensus 515 ~~~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~-~~~--~~p~~r-~~~~~~~~~~~i~v 589 (712)
+.+= +..++.+ ..+.+.+.-++++|+.-| .+.+..+|+.+.+=. .++ ..+.+. .-..+...++++|+
T Consensus 95 t~~v--~~~i~~g~~~g~glt~Dg~~l~vs~g------s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyv 166 (266)
T 2iwa_A 95 TLSN--IKNFTHQMKDGWGLATDGKILYGSDG------TSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWA 166 (266)
T ss_dssp TTEE--EEEEECCSSSCCEEEECSSSEEEECS------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEE
T ss_pred CCcE--EEEEECCCCCeEEEEECCCEEEEECC------CCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEE
Confidence 7753 2222222 344555555678998765 468999999886533 221 111111 11234445889887
Q ss_pred EcccCCCceeeeEEEEECCCCe
Q psy14726 590 IGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 590 ~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
--.. .++|.+.|+++++
T Consensus 167 n~~~-----~~~V~vID~~tg~ 183 (266)
T 2iwa_A 167 NIWQ-----TDCIARISAKDGT 183 (266)
T ss_dssp EETT-----SSEEEEEETTTCC
T ss_pred ecCC-----CCeEEEEECCCCc
Confidence 6322 3489999999875
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=97.40 E-value=0.025 Score=58.19 Aligned_cols=240 Identities=11% Similarity=0.134 Sum_probs=123.5
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEE
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 426 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 426 (712)
+.++++|+. ...+..||..+++|..+..... ....-.+++.. ++..++.|+.+ ..+..||..++++..
T Consensus 20 ~~~l~~~~~-----d~~v~i~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~ 88 (372)
T 1k8k_C 20 RTQIAICPN-----NHEVHIYEKSGNKWVQVHELKE-HNGQVTGVDWAPDSNRIVTCGTD-----RNAYVWTLKGRTWKP 88 (372)
T ss_dssp SSEEEEECS-----SSEEEEEEEETTEEEEEEEEEC-CSSCEEEEEEETTTTEEEEEETT-----SCEEEEEEETTEEEE
T ss_pred CCEEEEEeC-----CCEEEEEeCCCCcEEeeeeecC-CCCcccEEEEeCCCCEEEEEcCC-----CeEEEEECCCCeeee
Confidence 445666653 2468889988887544322111 11222334444 56677777754 358889998888765
Q ss_pred eCCCCCCcce-eEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCc-eEEcccCCcc-ccceeEEEE--CCEEEEEcccC
Q psy14726 427 IAPMNFKRCY-VSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQ-WSLIAPMNVE-RSDASATTL--QGKIYITGGFN 500 (712)
Q Consensus 427 ~~~~~~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~~~p~~-r~~~~~~~~--~~~iyv~GG~~ 500 (712)
...+...... .+++. .+++.++.|+.+ ..+..||..+.. |........+ ........+ ++..++.|+.+
T Consensus 89 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 163 (372)
T 1k8k_C 89 TLVILRINRAARCVRWAPNEKKFAVGSGS-----RVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD 163 (372)
T ss_dssp EEECCCCSSCEEEEEECTTSSEEEEEETT-----SSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred eEEeecCCCceeEEEECCCCCEEEEEeCC-----CEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCC
Confidence 5433222222 22333 256777777643 346777766654 4333222222 112222333 66777777765
Q ss_pred CCCccCceEEeeCCCC----------------eeEEeCCCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCC
Q psy14726 501 GHNCLNSCEVYDPECN----------------QWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVT 562 (712)
Q Consensus 501 ~~~~~~~v~~yd~~~~----------------~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~ 562 (712)
+ .+..||.... .-..+..+.........+.+ ++..++.|+.+ ..+..||..+
T Consensus 164 g-----~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~ 233 (372)
T 1k8k_C 164 F-----KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHD-----STVCLADADK 233 (372)
T ss_dssp S-----CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETT-----TEEEEEEGGG
T ss_pred C-----CEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCC-----CEEEEEECCC
Confidence 3 5777875311 11122222211122222333 55566666643 4688899876
Q ss_pred CcEEEcCCCCCCccceEEEE-ECCEEEEEcccCCCceeeeEEEEECCC--CeEEEccCCCC
Q psy14726 563 KTWSQVPDMYNPRSNFAIEV-IDDMIFAIGGFNGVTTIYHVECYDEKT--DEWYEATDMNI 620 (712)
Q Consensus 563 ~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~--~~W~~~~~~p~ 620 (712)
.+-...-..... .-.+++. -++.+++.| .++ .+.+||..+ +.|..+..+..
T Consensus 234 ~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~-~d~-----~i~i~~~~~~~~~~~~~~~~~~ 287 (372)
T 1k8k_C 234 KMAVATLASETL-PLLAVTFITESSLVAAG-HDC-----FPVLFTYDSAAGKLSFGGRLDV 287 (372)
T ss_dssp TTEEEEEECSSC-CEEEEEEEETTEEEEEE-TTS-----SCEEEEEETTTTEEEECCCCCC
T ss_pred CceeEEEccCCC-CeEEEEEecCCCEEEEE-eCC-----eEEEEEccCcCceEEEeeccCc
Confidence 653322111111 1122232 267766665 433 356777777 99988866654
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=97.37 E-value=0.041 Score=58.62 Aligned_cols=213 Identities=14% Similarity=0.183 Sum_probs=117.8
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEECCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEE
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH 442 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~ 442 (712)
..+..+|..+++-... .... ...-.+++. .+.+++.|+.+ ..+..||..+++-... +............
T Consensus 139 g~i~vwd~~~~~~~~~--~~~h-~~~v~~~~~-~~~~l~s~~~d-----g~i~vwd~~~~~~~~~--~~~h~~~v~~~~~ 207 (445)
T 2ovr_B 139 NTLKVWSAVTGKCLRT--LVGH-TGGVWSSQM-RDNIIISGSTD-----RTLKVWNAETGECIHT--LYGHTSTVRCMHL 207 (445)
T ss_dssp SCEEEEETTTCCEEEE--CCCC-SSCEEEEEE-ETTEEEEEETT-----SCEEEEETTTTEEEEE--ECCCSSCEEEEEE
T ss_pred CcEEEEECCCCcEEEE--EcCC-CCCEEEEEe-cCCEEEEEeCC-----CeEEEEECCcCcEEEE--ECCCCCcEEEEEe
Confidence 3578889887765431 1111 111223333 35566777754 3588999988764322 1112222233334
Q ss_pred CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCeeEEeC
Q psy14726 443 HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIE 522 (712)
Q Consensus 443 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 522 (712)
++..++.|+.+ ..+..||..+.+-... +........++..++..++.|+.++ .+..||..+.+-..
T Consensus 208 ~~~~l~s~s~d-----g~i~~wd~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~-- 273 (445)
T 2ovr_B 208 HEKRVVSGSRD-----ATLRVWDIETGQCLHV--LMGHVAAVRCVQYDGRRVVSGAYDF-----MVKVWDPETETCLH-- 273 (445)
T ss_dssp ETTEEEEEETT-----SEEEEEESSSCCEEEE--EECCSSCEEEEEECSSCEEEEETTS-----CEEEEEGGGTEEEE--
T ss_pred cCCEEEEEeCC-----CEEEEEECCCCcEEEE--EcCCcccEEEEEECCCEEEEEcCCC-----EEEEEECCCCcEeE--
Confidence 55666777644 4688999887653322 1111222334445788888887664 57888887765322
Q ss_pred CCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEECCEEEEEcccCCCceeeeE
Q psy14726 523 PMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHV 602 (712)
Q Consensus 523 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v 602 (712)
.+........++..++..++.|+.+ ..+..||..+.+-...- ............++..++.|+.++ .+
T Consensus 274 ~~~~~~~~v~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~--~~~~~~v~~~~~~~~~l~~~~~dg-----~i 341 (445)
T 2ovr_B 274 TLQGHTNRVYSLQFDGIHVVSGSLD-----TSIRVWDVETGNCIHTL--TGHQSLTSGMELKDNILVSGNADS-----TV 341 (445)
T ss_dssp EECCCSSCEEEEEECSSEEEEEETT-----SCEEEEETTTCCEEEEE--CCCCSCEEEEEEETTEEEEEETTS-----CE
T ss_pred EecCCCCceEEEEECCCEEEEEeCC-----CeEEEEECCCCCEEEEE--cCCcccEEEEEEeCCEEEEEeCCC-----eE
Confidence 2222222333444577777777754 56889998876533221 111222233444566777777665 57
Q ss_pred EEEECCCCeE
Q psy14726 603 ECYDEKTDEW 612 (712)
Q Consensus 603 ~~yd~~~~~W 612 (712)
.+||..+++-
T Consensus 342 ~vwd~~~~~~ 351 (445)
T 2ovr_B 342 KIWDIKTGQC 351 (445)
T ss_dssp EEEETTTCCE
T ss_pred EEEECCCCcE
Confidence 8899877654
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.0072 Score=58.87 Aligned_cols=154 Identities=12% Similarity=-0.013 Sum_probs=102.8
Q ss_pred ceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCC
Q psy14726 435 CYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPE 514 (712)
Q Consensus 435 ~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~ 514 (712)
+..++...++.+|+..|..+ .+.++|+.+.+=..-- ++..-.+.+++..+++||+....+ +.+++||++
T Consensus 56 ftqGL~~~~~~Ly~stG~~g-----~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~-----~~v~V~D~~ 124 (268)
T 3nok_A 56 FTQGLVFHQGHFFESTGHQG-----TLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTE-----GLLFTWSGM 124 (268)
T ss_dssp CEEEEEEETTEEEEEETTTT-----EEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSS-----CEEEEEETT
T ss_pred ccceEEEECCEEEEEcCCCC-----EEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccC-----CEEEEEECC
Confidence 34567777999999988643 3899999998743333 554445566777899999986543 679999998
Q ss_pred CCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEE-c--CCCCCCccc-eEEEEECCEEEEE
Q psy14726 515 CNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQ-V--PDMYNPRSN-FAIEVIDDMIFAI 590 (712)
Q Consensus 515 ~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-~--~~~p~~r~~-~~~~~~~~~i~v~ 590 (712)
+.+-.. ..+.+..+.+++.-+++||+.-| .+.++.+||++.+-.. + ..-+.+... -.+...+++||+-
T Consensus 125 Tl~~~~--ti~~~~eGwGLt~Dg~~L~vSdG------s~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyan 196 (268)
T 3nok_A 125 PPQRER--TTRYSGEGWGLCYWNGKLVRSDG------GTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYAN 196 (268)
T ss_dssp TTEEEE--EEECSSCCCCEEEETTEEEEECS------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEE
T ss_pred cCcEEE--EEeCCCceeEEecCCCEEEEECC------CCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEE
Confidence 876432 22333456677777889999876 3689999999865332 2 111111111 1244558998854
Q ss_pred cccCCCceeeeEEEEECCCCeE
Q psy14726 591 GGFNGVTTIYHVECYDEKTDEW 612 (712)
Q Consensus 591 GG~~~~~~~~~v~~yd~~~~~W 612 (712)
- + ..+.|.+.||++++=
T Consensus 197 v-w----~s~~I~vIDp~TG~V 213 (268)
T 3nok_A 197 I-W----HSSDVLEIDPATGTV 213 (268)
T ss_dssp E-T----TCSEEEEECTTTCBE
T ss_pred E-C----CCCeEEEEeCCCCcE
Confidence 2 2 235899999999853
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.11 Score=51.32 Aligned_cols=217 Identities=10% Similarity=-0.025 Sum_probs=118.5
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV 441 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~ 441 (712)
..+..||+. +++..+.... ....-+++++. ++.+|+.... ...+++||+. +++...........-++++.
T Consensus 41 ~~v~~~~~~-~~~~~~~~~~--~~~~~~~i~~~~~g~l~v~~~~-----~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~ 111 (300)
T 2qc5_A 41 NKISSLDQS-GRIKEFEVPT--PDAKVMCLIVSSLGDIWFTENG-----ANKIGKLSKK-GGFTEYPLPQPDSGPYGITE 111 (300)
T ss_dssp TEEEEECTT-SCEEEEECSS--TTCCEEEEEECTTSCEEEEETT-----TTEEEEECTT-SCEEEEECSSTTCCEEEEEE
T ss_pred CeEEEECCC-CceEEEECCC--CCCcceeEEECCCCCEEEEecC-----CCeEEEECCC-CCeEEecCCCCCCCCccceE
Confidence 468889988 6666532211 11223344443 5778876532 2468999998 77765432212233344444
Q ss_pred E-CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCee
Q psy14726 442 H-HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQW 518 (712)
Q Consensus 442 ~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 518 (712)
- +|++|+.+.. ...+.+||+. .+..... ++..-.......+ ++++|+.... ...+.+||+ ++++
T Consensus 112 ~~~g~l~v~~~~-----~~~i~~~~~~-g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~-----~~~i~~~~~-~g~~ 178 (300)
T 2qc5_A 112 GLNGDIWFTQLN-----GDRIGKLTAD-GTIYEYD-LPNKGSYPAFITLGSDNALWFTENQ-----NNSIGRITN-TGKL 178 (300)
T ss_dssp CSTTCEEEEETT-----TTEEEEECTT-SCEEEEE-CSSTTCCEEEEEECTTSSEEEEETT-----TTEEEEECT-TCCE
T ss_pred CCCCCEEEEccC-----CCeEEEECCC-CCEEEcc-CCCCCCCceeEEECCCCCEEEEecC-----CCeEEEECC-CCcE
Confidence 3 6789886432 2468899987 6555432 2222222233333 5778886532 246899998 6666
Q ss_pred EEeCCCCCCCcce-EEEEE-CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccc-eEEEEE-CCEEEEEcccC
Q psy14726 519 TLIEPMRHRRSGV-SCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSN-FAIEVI-DDMIFAIGGFN 594 (712)
Q Consensus 519 ~~~~~~p~~r~~~-~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~-~~~~~~-~~~i~v~GG~~ 594 (712)
.... ++...... +++.. ++.||+.... ...+.+||+ +.++..... +..... .+++.- ++.||+....+
T Consensus 179 ~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~~~-~~~~~~~~~i~~d~~g~l~v~~~~~ 250 (300)
T 2qc5_A 179 EEYP-LPTNAAAPVGITSGNDGALWFVEIM-----GNKIGRITT-TGEISEYDI-PTPNARPHAITAGKNSEIWFTEWGA 250 (300)
T ss_dssp EEEE-CSSTTCCEEEEEECTTSSEEEEETT-----TTEEEEECT-TCCEEEEEC-SSTTCCEEEEEECSTTCEEEEETTT
T ss_pred EEee-CCCCCCCcceEEECCCCCEEEEccC-----CCEEEEEcC-CCcEEEEEC-CCCCCCceEEEECCCCCEEEeccCC
Confidence 6543 22222222 33332 5788887532 246899998 566665422 211222 233332 56788875321
Q ss_pred CCceeeeEEEEECCCCeEEEc
Q psy14726 595 GVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 595 ~~~~~~~v~~yd~~~~~W~~~ 615 (712)
+.+.+||+ +++....
T Consensus 251 -----~~i~~~~~-~g~~~~~ 265 (300)
T 2qc5_A 251 -----NQIGRITN-DNTIQEY 265 (300)
T ss_dssp -----TEEEEECT-TSCEEEE
T ss_pred -----CeEEEECC-CCcEEEE
Confidence 36888998 4555543
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=97.33 E-value=0.037 Score=56.53 Aligned_cols=221 Identities=7% Similarity=-0.023 Sum_probs=119.7
Q ss_pred CceEEEEECCCCcEEEcccCCCCCCCcceEEEEE--CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCC------
Q psy14726 362 TDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFK------ 433 (712)
Q Consensus 362 ~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~------ 433 (712)
...+..+|+.+++....-.. ....+++++. ++.+|+.++.+ ..++.+|+.+++-...-+.+..
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~----~~~~~~~~~s~dg~~l~v~~~~~-----~~v~~~d~~~~~~~~~~~~~~~~~~~~~ 138 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHN----DLKPFGATINNTTQTLWFGNTVN-----SAVTAIDAKTGEVKGRLVLDDRKRTEEV 138 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEE----SSCCCSEEEETTTTEEEEEETTT-----TEEEEEETTTCCEEEEEESCCCCCCSSC
T ss_pred CccEEEEcCCCCeEEEEEec----CCCcceEEECCCCCEEEEEecCC-----CEEEEEeCCCCeeEEEEecCCCcccccc
Confidence 35689999988765432111 1112344444 35577776532 4789999998875332222211
Q ss_pred --cceeEEEEE-C-CeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCc
Q psy14726 434 --RCYVSTAVH-H-DVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNS 507 (712)
Q Consensus 434 --r~~~~~~~~-~-~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~ 507 (712)
..-+.++.. + +.+|+.+... ...+++||+.+.+-...-+. ....-++++.. ++.+|+... + ..
T Consensus 139 ~~~~~~~~~~s~dg~~l~~~~~~~----~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~-~-----~~ 207 (353)
T 3vgz_A 139 RPLQPRELVADDATNTVYISGIGK----ESVIWVVDGGNIKLKTAIQN-TGKMSTGLALDSEGKRLYTTNA-D-----GE 207 (353)
T ss_dssp CCCEEEEEEEETTTTEEEEEEESS----SCEEEEEETTTTEEEEEECC-CCTTCCCCEEETTTTEEEEECT-T-----SE
T ss_pred CCCCCceEEECCCCCEEEEEecCC----CceEEEEcCCCCceEEEecC-CCCccceEEECCCCCEEEEEcC-C-----Ce
Confidence 112334443 3 4677765221 25699999987764332221 12212233333 345777643 2 46
Q ss_pred eEEeeCCCCeeEEeCCCCC--CCcc-eEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEE
Q psy14726 508 CEVYDPECNQWTLIEPMRH--RRSG-VSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEV 582 (712)
Q Consensus 508 v~~yd~~~~~W~~~~~~p~--~r~~-~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~ 582 (712)
+..||+.+.+-...-..+. +... .+++.. ++.+|+.+.. ...+..||+.+.+....-..+.+ .+++.
T Consensus 208 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-----~~~v~~~d~~~~~~~~~~~~~~~---~~~~~ 279 (353)
T 3vgz_A 208 LITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSK-----AAEVLVVDTRNGNILAKVAAPES---LAVLF 279 (353)
T ss_dssp EEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS-----SSEEEEEETTTCCEEEEEECSSC---CCEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC-----CCEEEEEECCCCcEEEEEEcCCC---ceEEE
Confidence 8899998886433322211 1222 223333 4568777642 36899999988775544333333 22333
Q ss_pred E--CCEEEEEcccCCCceeeeEEEEECCCCeEEEc
Q psy14726 583 I--DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 583 ~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
. ++.+|+.++.+ ..+.+||+.+.+....
T Consensus 280 s~dg~~l~v~~~~~-----~~v~~~d~~~~~~~~~ 309 (353)
T 3vgz_A 280 NPARNEAYVTHRQA-----GKVSVIDAKSYKVVKT 309 (353)
T ss_dssp ETTTTEEEEEETTT-----TEEEEEETTTTEEEEE
T ss_pred CCCCCEEEEEECCC-----CeEEEEECCCCeEEEE
Confidence 3 44577776443 3689999998876543
|
| >3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00024 Score=65.46 Aligned_cols=91 Identities=20% Similarity=0.313 Sum_probs=71.5
Q ss_pred EEEEecCCcEEeceeeeecccC-HHHHHhhcCCCC----cCCccceEEcCCCCHHHHHHHhhhhccCceecChh-hHHHH
Q psy14726 95 ATIVLADNSHFPIHRNILCACS-DYFRALFTTSLH----DQEKFSLVEIPGVDASVMTSLIEYAYLRKLHITED-NVASL 168 (712)
Q Consensus 95 v~l~v~~~~~~~~Hk~vL~~~S-~yF~~mf~~~~~----e~~~~~~i~l~~~~~~~f~~~l~~~Yt~~~~i~~~-~~~~l 168 (712)
|+|.| +|+.|...+..|.... .+|.+||.+... .... .++.| |=+|..|+.||+|+-+|++.++.+ ....+
T Consensus 14 V~LNV-GG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~-geyFI-DRDP~~F~~ILnyLRtG~L~lP~~~~~~~l 90 (202)
T 3drx_A 14 VRLNV-GGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDET-GAYLI-DRDPTYFGPVLNYLRHGKLVINKDLAEEGV 90 (202)
T ss_dssp EEEEE-TTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTT-CCEEE-CSCSTTHHHHHHHHHHSCCCCCTTSCHHHH
T ss_pred EEEEE-CCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCC-ccEEe-cCChHHHHHHHHHhcCCccCCCCCCCHHHH
Confidence 67788 9999999999998764 488999976421 1123 45666 578999999999999999987654 34678
Q ss_pred HHHhhhcChHHHHHHHHHhh
Q psy14726 169 LLATDFFCMSKAQDLCCDFI 188 (712)
Q Consensus 169 l~~A~~~~i~~L~~~c~~~l 188 (712)
++-|.+|+|++|++.|.+.|
T Consensus 91 ~eEA~FygL~~Lv~~l~~~i 110 (202)
T 3drx_A 91 LEEAEFYNITSLIKLVKDKI 110 (202)
T ss_dssp HHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHCCcHHHHHHHHHHH
Confidence 88999999999988887754
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=97.32 E-value=0.054 Score=57.68 Aligned_cols=217 Identities=13% Similarity=0.129 Sum_probs=120.8
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEECCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEE
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH 442 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~ 442 (712)
..+..+|..+++-... .... ...-.++.. ++..++.|+.+ ..+..||..+++-...-. ........+..
T Consensus 179 g~i~vwd~~~~~~~~~--~~~h-~~~v~~~~~-~~~~l~s~s~d-----g~i~~wd~~~~~~~~~~~--~~~~~v~~~~~ 247 (445)
T 2ovr_B 179 RTLKVWNAETGECIHT--LYGH-TSTVRCMHL-HEKRVVSGSRD-----ATLRVWDIETGQCLHVLM--GHVAAVRCVQY 247 (445)
T ss_dssp SCEEEEETTTTEEEEE--ECCC-SSCEEEEEE-ETTEEEEEETT-----SEEEEEESSSCCEEEEEE--CCSSCEEEEEE
T ss_pred CeEEEEECCcCcEEEE--ECCC-CCcEEEEEe-cCCEEEEEeCC-----CEEEEEECCCCcEEEEEc--CCcccEEEEEE
Confidence 3577888887765431 1111 111122333 44556677643 468899988776432211 11222233444
Q ss_pred CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCeeEEeC
Q psy14726 443 HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIE 522 (712)
Q Consensus 443 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 522 (712)
++..++.|+.+ ..+..||+.+.+-. ..+........+...++..++.|+.++ .+..||..+.+-...
T Consensus 248 ~~~~l~~~~~d-----g~i~iwd~~~~~~~--~~~~~~~~~v~~~~~~~~~l~~~~~d~-----~i~i~d~~~~~~~~~- 314 (445)
T 2ovr_B 248 DGRRVVSGAYD-----FMVKVWDPETETCL--HTLQGHTNRVYSLQFDGIHVVSGSLDT-----SIRVWDVETGNCIHT- 314 (445)
T ss_dssp CSSCEEEEETT-----SCEEEEEGGGTEEE--EEECCCSSCEEEEEECSSEEEEEETTS-----CEEEEETTTCCEEEE-
T ss_pred CCCEEEEEcCC-----CEEEEEECCCCcEe--EEecCCCCceEEEEECCCEEEEEeCCC-----eEEEEECCCCCEEEE-
Confidence 77777877754 45888998776532 222222222334445777778887664 588899887653222
Q ss_pred CCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEc-CCCCCCccceEEEEECCEEEEEcccCCCceeee
Q psy14726 523 PMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQV-PDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYH 601 (712)
Q Consensus 523 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~ 601 (712)
+............++..++.|+.+ ..+..||..+.+-... ............+..++..++.||.++ .
T Consensus 315 -~~~~~~~v~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg-----~ 383 (445)
T 2ovr_B 315 -LTGHQSLTSGMELKDNILVSGNAD-----STVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDG-----T 383 (445)
T ss_dssp -ECCCCSCEEEEEEETTEEEEEETT-----SCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTS-----E
T ss_pred -EcCCcccEEEEEEeCCEEEEEeCC-----CeEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEEeCCC-----e
Confidence 111122233344455566667654 5688999877653322 211112233344555788888888765 6
Q ss_pred EEEEECCCCeEEE
Q psy14726 602 VECYDEKTDEWYE 614 (712)
Q Consensus 602 v~~yd~~~~~W~~ 614 (712)
+.+||..+++...
T Consensus 384 v~iwd~~~~~~~~ 396 (445)
T 2ovr_B 384 VKLWDLKTGEFIR 396 (445)
T ss_dssp EEEEETTTCCEEE
T ss_pred EEEEECCCCceee
Confidence 8899998876543
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.019 Score=59.16 Aligned_cols=190 Identities=14% Similarity=0.075 Sum_probs=107.1
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEE--C--CeEEEEcccCCCCCCceeEEeecCCCce
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH--H--DVIYAMGGYNGQRRQNSVEKYNYTENQW 471 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~v~~yd~~~~~W 471 (712)
++..++.|+.+ ..+..||....++..+..+...........+ + +.+++.|+.+ ..+..||..+.+|
T Consensus 22 ~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~ 91 (379)
T 3jrp_A 22 YGKRLATCSSD-----KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-----GKVLIWKEENGRW 91 (379)
T ss_dssp SSSEEEEEETT-----SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SCEEEEEEETTEE
T ss_pred CCCEEEEEECC-----CcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccC-----CEEEEEEcCCCce
Confidence 45566677654 3478888877777665544433333333333 2 6777777754 4689999999988
Q ss_pred EEcccCCccccceeEEEE--C--CEEEEEcccCCCCccCceEEeeCCCCeeEEeCCC-CCCCcceEEEEE----------
Q psy14726 472 SLIAPMNVERSDASATTL--Q--GKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPM-RHRRSGVSCIAY---------- 536 (712)
Q Consensus 472 ~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-p~~r~~~~~~~~---------- 536 (712)
..+..+........++.+ + +.+++.|+.++ .+..||..+..-...-.+ .....-.++...
T Consensus 92 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~-----~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 166 (379)
T 3jrp_A 92 SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDG-----KVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEH 166 (379)
T ss_dssp EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS-----EEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC-------
T ss_pred eEeeeecCCCcceEEEEeCCCCCCCEEEEecCCC-----cEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccc
Confidence 777555433333344444 3 66777777653 577888776632111001 111111122222
Q ss_pred ----CCEEEEEcCCCCCCccceEEEEeCCCC--cEEEcCCCCCCccceEEEEE--C---CEEEEEcccCCCceeeeEEEE
Q psy14726 537 ----HECIYVIGGFNGMSRMCNGEKYNPVTK--TWSQVPDMYNPRSNFAIEVI--D---DMIFAIGGFNGVTTIYHVECY 605 (712)
Q Consensus 537 ----~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~---~~i~v~GG~~~~~~~~~v~~y 605 (712)
++.+++.|+.+ ..+..||..+. .|..+..+.........+.+ + +.+++.|+.++ .+.+|
T Consensus 167 ~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg-----~i~iw 236 (379)
T 3jrp_A 167 NGTKESRKFVTGGAD-----NLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDR-----TCIIW 236 (379)
T ss_dssp ---CTTCEEEEEETT-----SCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTS-----CEEEE
T ss_pred cCCCCCCEEEEEeCC-----CeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCC-----EEEEE
Confidence 36777777764 35777877543 35554433322222233333 4 78888888776 46777
Q ss_pred ECCCC
Q psy14726 606 DEKTD 610 (712)
Q Consensus 606 d~~~~ 610 (712)
|..+.
T Consensus 237 d~~~~ 241 (379)
T 3jrp_A 237 TQDNE 241 (379)
T ss_dssp EESST
T ss_pred eCCCC
Confidence 77665
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=97.24 E-value=0.062 Score=53.97 Aligned_cols=228 Identities=11% Similarity=0.113 Sum_probs=119.0
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEE
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 426 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 426 (712)
+..++.|+.+ ..+..+|..+++....-.. ....-.+++.. ++.+++.|+.+ ..+..||..+++-..
T Consensus 35 ~~~l~s~~~d-----g~i~iw~~~~~~~~~~~~~---h~~~v~~~~~~~~~~~l~s~~~d-----~~i~vwd~~~~~~~~ 101 (312)
T 4ery_A 35 GEWLASSSAD-----KLIKIWGAYDGKFEKTISG---HKLGISDVAWSSDSNLLVSASDD-----KTLKIWDVSSGKCLK 101 (312)
T ss_dssp SSEEEEEETT-----SCEEEEETTTCCEEEEECC---CSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCEEE
T ss_pred CCEEEEeeCC-----CeEEEEeCCCcccchhhcc---CCCceEEEEEcCCCCEEEEECCC-----CEEEEEECCCCcEEE
Confidence 3455566532 3477788877776542111 11112233333 56777777754 468889988776432
Q ss_pred eCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCC
Q psy14726 427 IAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHN 503 (712)
Q Consensus 427 ~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~ 503 (712)
.-.-..... .+++. .++..++.|+.+ ..+..||+.+.+-... ++........+.+ ++++++.|+.++
T Consensus 102 ~~~~~~~~v-~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~-- 171 (312)
T 4ery_A 102 TLKGHSNYV-FCCNFNPQSNLIVSGSFD-----ESVRIWDVKTGKCLKT--LPAHSDPVSAVHFNRDGSLIVSSSYDG-- 171 (312)
T ss_dssp EEECCSSCE-EEEEECSSSSEEEEEETT-----SCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS--
T ss_pred EEcCCCCCE-EEEEEcCCCCEEEEEeCC-----CcEEEEECCCCEEEEE--ecCCCCcEEEEEEcCCCCEEEEEeCCC--
Confidence 211111111 12222 356677777754 3588999887653221 2211122223333 567778887664
Q ss_pred ccCceEEeeCCCCeeEEeC-CCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEc-CCCCCCcc-ceEE
Q psy14726 504 CLNSCEVYDPECNQWTLIE-PMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQV-PDMYNPRS-NFAI 580 (712)
Q Consensus 504 ~~~~v~~yd~~~~~W~~~~-~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~p~~r~-~~~~ 580 (712)
.+..||..+.+....- ....+........-++..++.|+.+ ..+..||..+.+-... ........ ....
T Consensus 172 ---~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 243 (312)
T 4ery_A 172 ---LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD-----NTLKLWDYSKGKCLKTYTGHKNEKYCIFAN 243 (312)
T ss_dssp ---CEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETT-----TEEEEEETTTTEEEEEECSSCCSSSCCCEE
T ss_pred ---cEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCC-----CeEEEEECCCCcEEEEEEecCCceEEEEEE
Confidence 5888998877643221 1111111111222256666666654 5788999887653322 11111111 1122
Q ss_pred E-EECCEEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 581 E-VIDDMIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 581 ~-~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
. .-++.+++.||.++ .+.+||..+++
T Consensus 244 ~~~~~~~~l~sg~~dg-----~i~vwd~~~~~ 270 (312)
T 4ery_A 244 FSVTGGKWIVSGSEDN-----LVYIWNLQTKE 270 (312)
T ss_dssp EECSSSCEEEECCTTS-----CEEEEETTTCC
T ss_pred EEeCCCcEEEEECCCC-----EEEEEECCCch
Confidence 2 23677888888765 57888988765
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.21 E-value=0.045 Score=55.55 Aligned_cols=187 Identities=11% Similarity=0.066 Sum_probs=100.5
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA 475 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 475 (712)
++.+++.|+.+ ..+..+|..+++-...-.............-+++.++.|+.+ ..+..||..+.+-...
T Consensus 91 ~~~~l~s~s~D-----~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~d-----g~v~i~~~~~~~~~~~- 159 (321)
T 3ow8_A 91 TLPIAASSSLD-----AHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHV-----GKVNIFGVESGKKEYS- 159 (321)
T ss_dssp SSSEEEEEETT-----SEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTT-----SEEEEEETTTCSEEEE-
T ss_pred CCCEEEEEeCC-----CcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCC-----CcEEEEEcCCCceeEE-
Confidence 45566777654 468889988876432211111111112223456777777643 4678888877653221
Q ss_pred cCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEe-CCCCCCCcceEEEEECCEEEEEcCCCCCCcc
Q psy14726 476 PMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLI-EPMRHRRSGVSCIAYHECIYVIGGFNGMSRM 552 (712)
Q Consensus 476 ~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~ 552 (712)
+........++.+ +++.++.|+.++ .+..||..+++-... .....+ ....+..-++.+++.|+.+
T Consensus 160 -~~~~~~~v~~~~~spdg~~lasg~~dg-----~i~iwd~~~~~~~~~~~~h~~~-v~~l~~spd~~~l~s~s~d----- 227 (321)
T 3ow8_A 160 -LDTRGKFILSIAYSPDGKYLASGAIDG-----IINIFDIATGKLLHTLEGHAMP-IRSLTFSPDSQLLVTASDD----- 227 (321)
T ss_dssp -EECSSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEEEEECCCSSC-CCEEEECTTSCEEEEECTT-----
T ss_pred -ecCCCceEEEEEECCCCCEEEEEcCCC-----eEEEEECCCCcEEEEEcccCCc-eeEEEEcCCCCEEEEEcCC-----
Confidence 1111111222233 677788887664 588899888764322 111111 1111222267777888764
Q ss_pred ceEEEEeCCCCcEEEcCCCCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCeE
Q psy14726 553 CNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEW 612 (712)
Q Consensus 553 ~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 612 (712)
..+..||..+...... +.........+.+ ++..++.||.++ .+.+||..+.+-
T Consensus 228 g~i~iwd~~~~~~~~~--~~~h~~~v~~~~~sp~~~~l~s~s~D~-----~v~iwd~~~~~~ 282 (321)
T 3ow8_A 228 GYIKIYDVQHANLAGT--LSGHASWVLNVAFCPDDTHFVSSSSDK-----SVKVWDVGTRTC 282 (321)
T ss_dssp SCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEE
T ss_pred CeEEEEECCCcceeEE--EcCCCCceEEEEECCCCCEEEEEeCCC-----cEEEEeCCCCEE
Confidence 4688899887654332 1111111222333 677788888765 578888877653
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=97.17 E-value=0.019 Score=61.14 Aligned_cols=221 Identities=10% Similarity=0.160 Sum_probs=122.1
Q ss_pred eEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEECCEEEEEeecCCCCccceEEEEECCCCcEEEeC
Q psy14726 349 ILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIA 428 (712)
Q Consensus 349 ~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 428 (712)
..++.|+.+ ..+..||..+.+-...-. .......+...++.+++.|+.++ .+..||..+++-...
T Consensus 144 ~~l~~g~~d-----g~i~iwd~~~~~~~~~~~----~h~~~v~~l~~~~~~l~sg~~dg-----~i~vwd~~~~~~~~~- 208 (435)
T 1p22_A 144 QKIVSGLRD-----NTIKIWDKNTLECKRILT----GHTGSVLCLQYDERVIITGSSDS-----TVRVWDVNTGEMLNT- 208 (435)
T ss_dssp SEEEEEESS-----SCEEEEESSSCCEEEEEC----CCSSCEEEEECCSSEEEEEETTS-----CEEEEESSSCCEEEE-
T ss_pred CEEEEEeCC-----CeEEEEeCCCCeEEEEEc----CCCCcEEEEEECCCEEEEEcCCC-----eEEEEECCCCcEEEE-
Confidence 345566532 357888987776543211 11112222333777888888643 588999988765332
Q ss_pred CCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEc-ccCCccccceeEEEECCEEEEEcccCCCCccCc
Q psy14726 429 PMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI-APMNVERSDASATTLQGKIYITGGFNGHNCLNS 507 (712)
Q Consensus 429 ~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~ 507 (712)
+............++..++.||.+ ..+..||..+..-... ..+........++..++..++.|+.+ ..
T Consensus 209 -~~~h~~~v~~l~~~~~~l~s~s~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~d-----g~ 277 (435)
T 1p22_A 209 -LIHHCEAVLHLRFNNGMMVTCSKD-----RSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGD-----RT 277 (435)
T ss_dssp -ECCCCSCEEEEECCTTEEEEEETT-----SCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETT-----SE
T ss_pred -EcCCCCcEEEEEEcCCEEEEeeCC-----CcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCC-----Ce
Confidence 112222233444456677777754 4688888877542211 11111122223344466677777655 35
Q ss_pred eEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEECCEE
Q psy14726 508 CEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMI 587 (712)
Q Consensus 508 v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i 587 (712)
+..||..+.+-... +........++..++..++.|+.+ ..+..||..+.+-... +........++.+++..
T Consensus 278 i~vwd~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~g~~d-----g~i~iwd~~~~~~~~~--~~~h~~~v~~~~~~~~~ 348 (435)
T 1p22_A 278 IKVWNTSTCEFVRT--LNGHKRGIACLQYRDRLVVSGSSD-----NTIRLWDIECGACLRV--LEGHEELVRCIRFDNKR 348 (435)
T ss_dssp EEEEETTTCCEEEE--EECCSSCEEEEEEETTEEEEEETT-----SCEEEEETTTCCEEEE--ECCCSSCEEEEECCSSE
T ss_pred EEEEECCcCcEEEE--EcCCCCcEEEEEeCCCEEEEEeCC-----CeEEEEECCCCCEEEE--EeCCcCcEEEEEecCCE
Confidence 88899887653222 221222334444566677777754 5688999887643222 11112223344458888
Q ss_pred EEEcccCCCceeeeEEEEECCC
Q psy14726 588 FAIGGFNGVTTIYHVECYDEKT 609 (712)
Q Consensus 588 ~v~GG~~~~~~~~~v~~yd~~~ 609 (712)
++.|+.++ .+.+||..+
T Consensus 349 l~sg~~dg-----~i~vwd~~~ 365 (435)
T 1p22_A 349 IVSGAYDG-----KIKVWDLVA 365 (435)
T ss_dssp EEEEETTS-----CEEEEEHHH
T ss_pred EEEEeCCC-----cEEEEECCC
Confidence 88888765 567777654
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=97.15 E-value=0.11 Score=52.47 Aligned_cols=235 Identities=8% Similarity=-0.018 Sum_probs=114.8
Q ss_pred ceEEEEECC--CCcEEEcccCCCCCCCcceEEEEE-CC-EEEEEeecCCCCccceEEEEECCCCc-EEEeCCCCCCccee
Q psy14726 363 DFVETYDTR--ADRWVKIEQVDPMGPRAYHGTAVI-GY-NIYVIGGFDGNEYYNSCRCFNAVTKV-WKEIAPMNFKRCYV 437 (712)
Q Consensus 363 ~~v~~~d~~--~~~W~~~~~~~~~~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~~~~~~r~~~ 437 (712)
..+..|+.. ++++..+.....+. ....+++. ++ .+|+.+. . ...+..||...+. ...+...+....-+
T Consensus 60 ~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~-~----~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 132 (343)
T 1ri6_A 60 FRVLAYRIAPDDGALTFAAESALPG--SLTHISTDHQGQFVFVGSY-N----AGNVSVTRLEDGLPVGVVDVVEGLDGCH 132 (343)
T ss_dssp TEEEEEEECTTTCCEEEEEEEECSS--CCSEEEECTTSSEEEEEET-T----TTEEEEEEEETTEEEEEEEEECCCTTBC
T ss_pred CeEEEEEecCCCCceeeccccccCC--CCcEEEEcCCCCEEEEEec-C----CCeEEEEECCCCccccccccccCCCCce
Confidence 466677665 66766532222111 22334443 34 4555543 2 2357888874322 22222222222223
Q ss_pred EEEEE-CC-eEEEEcccCCCCCCceeEEeecCC-CceEEcc--c--CCccccceeEEEE--CC-EEEEEcccCCCCccCc
Q psy14726 438 STAVH-HD-VIYAMGGYNGQRRQNSVEKYNYTE-NQWSLIA--P--MNVERSDASATTL--QG-KIYITGGFNGHNCLNS 507 (712)
Q Consensus 438 ~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~-~~W~~~~--~--~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~ 507 (712)
.++.. ++ .+|+.+..+ ..+.+||..+ .+...+. . .+.. .....+.+ ++ .+|+.+..+ +.
T Consensus 133 ~~~~s~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~pdg~~l~~~~~~~-----~~ 201 (343)
T 1ri6_A 133 SANISPDNRTLWVPALKQ-----DRICLFTVSDDGHLVAQDPAEVTTVEG-AGPRHMVFHPNEQYAYCVNELN-----SS 201 (343)
T ss_dssp CCEECTTSSEEEEEEGGG-----TEEEEEEECTTSCEEEEEEEEEECSTT-CCEEEEEECTTSSEEEEEETTT-----TE
T ss_pred EEEECCCCCEEEEecCCC-----CEEEEEEecCCCceeeecccccccCCC-CCcceEEECCCCCEEEEEeCCC-----CE
Confidence 33333 34 577765222 4689999887 6665432 1 1211 12222333 44 577776433 45
Q ss_pred eEEeeCC--CCeeEEe---CCCCCC---CcceEEEEE--C-CEEEEEcCCCCCCccceEEEEeCC--CCcEEEcCCCCCC
Q psy14726 508 CEVYDPE--CNQWTLI---EPMRHR---RSGVSCIAY--H-ECIYVIGGFNGMSRMCNGEKYNPV--TKTWSQVPDMYNP 574 (712)
Q Consensus 508 v~~yd~~--~~~W~~~---~~~p~~---r~~~~~~~~--~-~~iyv~GG~~~~~~~~~v~~yd~~--~~~W~~~~~~p~~ 574 (712)
+..||.. +.+++.. ..++.. ......+.+ + ..||+.++. ...+.+||.. +.+++.+...+..
T Consensus 202 i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~-----~~~i~v~d~~~~~~~~~~~~~~~~~ 276 (343)
T 1ri6_A 202 VDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRT-----ASLITVFSVSEDGSVLSKEGFQPTE 276 (343)
T ss_dssp EEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETT-----TTEEEEEEECTTSCCEEEEEEEECS
T ss_pred EEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecC-----CCEEEEEEEcCCCCceEEeeeecCC
Confidence 7778774 4554332 233322 112222233 3 467776643 2567888876 5567666443332
Q ss_pred ccceEEEEE-CC-EEEEEcccCCCceeeeEEEEECCCCeEEEccCCCCccc
Q psy14726 575 RSNFAIEVI-DD-MIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRS 623 (712)
Q Consensus 575 r~~~~~~~~-~~-~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~ 623 (712)
..-.+++.. ++ .+|+.++.++ .-.+|.+|+++++++.+..++.+..
T Consensus 277 ~~~~~~~~s~dg~~l~~~~~~~~---~v~v~~~d~~~g~~~~~~~~~~g~~ 324 (343)
T 1ri6_A 277 TQPRGFNVDHSGKYLIAAGQKSH---HISVYEIVGEQGLLHEKGRYAVGQG 324 (343)
T ss_dssp SSCCCEEECTTSSEEEEECTTTC---EEEEEEEETTTTEEEEEEEEECSSS
T ss_pred CccceEEECCCCCEEEEecCCCC---eEEEEEEcCCCceeeEccccccCCC
Confidence 222223333 44 4665554332 1235666898999988876665433
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=97.14 E-value=0.18 Score=49.86 Aligned_cols=194 Identities=10% Similarity=-0.000 Sum_probs=107.0
Q ss_pred EEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCC
Q psy14726 391 GTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTE 468 (712)
Q Consensus 391 ~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~ 468 (712)
++++. ++.+|+.... ...+.+||+. +++...........-++++. -+|.+|+.... ...+.+||+.
T Consensus 19 ~i~~d~~g~l~v~~~~-----~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~~- 86 (299)
T 2z2n_A 19 GITVSDKGKVWITQHK-----ANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENA-----ANKIGRITKK- 86 (299)
T ss_dssp EEEECTTSCEEEEETT-----TTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETT-----TTEEEEECTT-
T ss_pred ceEECCCCCEEEEecC-----CCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCC-----CCeEEEECCC-
Confidence 34433 6678876431 2468999998 77766542212223344444 36788887432 2468899986
Q ss_pred CceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CCEEEEEcC
Q psy14726 469 NQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HECIYVIGG 545 (712)
Q Consensus 469 ~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG 545 (712)
.++.... +|..........+ ++++|+....+ ..+.+||+ +++............-.+++.. ++.+|+...
T Consensus 87 g~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~~-----~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~ 159 (299)
T 2z2n_A 87 GIIKEYT-LPNPDSAPYGITEGPNGDIWFTEMNG-----NRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTEN 159 (299)
T ss_dssp SCEEEEE-CSSTTCCEEEEEECTTSCEEEEETTT-----TEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEET
T ss_pred CcEEEEe-CCCcCCCceeeEECCCCCEEEEecCC-----ceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeC
Confidence 4554443 2211222223333 57899875432 46889998 6665544321111222333333 578888653
Q ss_pred CCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCeEEEc
Q psy14726 546 FNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 546 ~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
. ...+.+||+ +.+............-.+++.- ++.+|+..... ..+.+||+ ++++...
T Consensus 160 ~-----~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~-----~~i~~~~~-~g~~~~~ 218 (299)
T 2z2n_A 160 Q-----NNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIG-----NKIGRITT-SGEITEF 218 (299)
T ss_dssp T-----TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTT-----TEEEEECT-TCCEEEE
T ss_pred C-----CCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCC-----ceEEEECC-CCcEEEE
Confidence 2 257899999 7777664211111122233333 57788764322 36889999 7777654
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=97.12 E-value=0.028 Score=55.02 Aligned_cols=193 Identities=14% Similarity=0.059 Sum_probs=101.6
Q ss_pred eEEEEE-CCEEEE-EeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEE-CCeEEEEcccCCCCCCceeEEeec
Q psy14726 390 HGTAVI-GYNIYV-IGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH-HDVIYAMGGYNGQRRQNSVEKYNY 466 (712)
Q Consensus 390 ~~~~~~-~~~lyv-~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~ 466 (712)
+++++. ++.+|+ ..+. ...+.+||+.+........... ..-++++.. +|++|+... ...+.+||+
T Consensus 27 ~~i~~~~~g~l~v~~~~~-----~~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~~~~g~l~v~~~------~~~i~~~d~ 94 (270)
T 1rwi_B 27 SGVAVDSAGNVYVTSEGM-----YGRVVKLATGSTGTTVLPFNGL-YQPQGLAVDGAGTVYVTDF------NNRVVTLAA 94 (270)
T ss_dssp EEEEECTTCCEEEEECSS-----SCEEEEECC-----EECCCCSC-CSCCCEEECTTCCEEEEET------TTEEEEECT
T ss_pred cceEECCCCCEEEEccCC-----CCcEEEecCCCcccceEeeCCc-CCcceeEECCCCCEEEEcC------CCEEEEEeC
Confidence 344443 567888 4331 2468889987766554432211 122334443 578888754 147899999
Q ss_pred CCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CCEEEEE
Q psy14726 467 TENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HECIYVI 543 (712)
Q Consensus 467 ~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~ 543 (712)
.+.......... ........+ +|++|+....+ ..+.+||..+........... ..-.+++.. +++||+.
T Consensus 95 ~~~~~~~~~~~~--~~~p~~i~~~~~g~l~v~~~~~-----~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~~~~g~l~v~ 166 (270)
T 1rwi_B 95 GSNNQTVLPFDG--LNYPEGLAVDTQGAVYVADRGN-----NRVVKLAAGSKTQTVLPFTGL-NDPDGVAVDNSGNVYVT 166 (270)
T ss_dssp TCSCCEECCCCS--CSSEEEEEECTTCCEEEEEGGG-----TEEEEECTTCCSCEECCCCSC-CSCCCEEECTTCCEEEE
T ss_pred CCceEeeeecCC--cCCCcceEECCCCCEEEEECCC-----CEEEEEECCCceeEeeccccC-CCceeEEEeCCCCEEEE
Confidence 887654442211 112223333 67899875432 468888877766544321111 111223333 5789987
Q ss_pred cCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCeEE
Q psy14726 544 GGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEWY 613 (712)
Q Consensus 544 GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 613 (712)
... ...+.+||+....-........ ..-.+++.- ++.+|+....+ ..+.+||+.+..-.
T Consensus 167 ~~~-----~~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~d~~g~l~v~~~~~-----~~v~~~~~~~~~~~ 226 (270)
T 1rwi_B 167 DTD-----NNRVVKLEAESNNQVVLPFTDI-TAPWGIAVDEAGTVYVTEHNT-----NQVVKLLAGSTTST 226 (270)
T ss_dssp EGG-----GTEEEEECTTTCCEEECCCSSC-CSEEEEEECTTCCEEEEETTT-----SCEEEECTTCSCCE
T ss_pred ECC-----CCEEEEEecCCCceEeecccCC-CCceEEEECCCCCEEEEECCC-----CcEEEEcCCCCcce
Confidence 642 2578999998776544322111 122233333 56788875432 25889998776433
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=97.12 E-value=0.015 Score=61.67 Aligned_cols=223 Identities=10% Similarity=0.013 Sum_probs=117.6
Q ss_pred eEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCC---CCccee-E
Q psy14726 364 FVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMN---FKRCYV-S 438 (712)
Q Consensus 364 ~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~---~~r~~~-~ 438 (712)
.++.+|+.++.+..+...+.+ ....+++.. ++.+++.|+.+ ..+..+|+.+++.....+.. ...... +
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~--~~~~~~~~s~~~~~~~~~~~~-----~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~ 174 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTG--FQPKSVRFIDNTRLAIPLLED-----EGMDVLDINSGQTVRLSPPEKYKKKLGFVET 174 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECS--SCBCCCEESSSSEEEEEBTTS-----SSEEEEETTTCCEEEECCCHHHHTTCCEEEE
T ss_pred EEEEECCCCCcceEEEEEcCC--CCceEEEEeCCCeEEEEeCCC-----CeEEEEECCCCeEeeecCcccccccCCceeE
Confidence 577778876655443222111 111223333 67888777643 35899999998876543332 111122 2
Q ss_pred EEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCC
Q psy14726 439 TAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPEC 515 (712)
Q Consensus 439 ~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~ 515 (712)
++. -++++++.|+.+ ..+.+||+.+.+....-.. ....-.+++.. +..+|+.|+.+ ..+.+||+.+
T Consensus 175 ~~~~~~~~~~~s~~~d-----~~v~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~-----~~i~~~d~~~ 243 (433)
T 3bws_A 175 ISIPEHNELWVSQMQA-----NAVHVFDLKTLAYKATVDL-TGKWSKILLYDPIRDLVYCSNWIS-----EDISVIDRKT 243 (433)
T ss_dssp EEEGGGTEEEEEEGGG-----TEEEEEETTTCCEEEEEEC-SSSSEEEEEEETTTTEEEEEETTT-----TEEEEEETTT
T ss_pred EEEcCCCEEEEEECCC-----CEEEEEECCCceEEEEEcC-CCCCeeEEEEcCCCCEEEEEecCC-----CcEEEEECCC
Confidence 222 367888887743 4689999887654322111 11111222222 44677776544 3689999988
Q ss_pred CeeEEeCCCCCCCcceEEEEE-CCEEEEEcCCCCCC---ccceEEEEeCCCCcEEEcCCCCCCccceEEEEE--CCEEEE
Q psy14726 516 NQWTLIEPMRHRRSGVSCIAY-HECIYVIGGFNGMS---RMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFA 589 (712)
Q Consensus 516 ~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~---~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v 589 (712)
++....-+. ...-.+++.. ++..+++++..... .-..+..||+.+.+-......+. ...+++.. ++.+|+
T Consensus 244 ~~~~~~~~~--~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~g~~l~~ 319 (433)
T 3bws_A 244 KLEIRKTDK--IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPG--NKRHIVSGNTENKIYV 319 (433)
T ss_dssp TEEEEECCC--CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEE--CEEEEEECSSTTEEEE
T ss_pred CcEEEEecC--CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCC--CcceEEECCCCCEEEE
Confidence 876444322 2222233332 44344444322111 13578999998775443321111 11122222 346888
Q ss_pred EcccCCCceeeeEEEEECCCCeEE
Q psy14726 590 IGGFNGVTTIYHVECYDEKTDEWY 613 (712)
Q Consensus 590 ~GG~~~~~~~~~v~~yd~~~~~W~ 613 (712)
.++.++ .+.+||+.+++-.
T Consensus 320 ~~~~~~-----~v~v~d~~~~~~~ 338 (433)
T 3bws_A 320 SDMCCS-----KIEVYDLKEKKVQ 338 (433)
T ss_dssp EETTTT-----EEEEEETTTTEEE
T ss_pred EecCCC-----EEEEEECCCCcEE
Confidence 876544 6889999876543
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=97.10 E-value=0.22 Score=53.13 Aligned_cols=226 Identities=12% Similarity=0.151 Sum_probs=120.4
Q ss_pred EEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE---CCEEEEEeecCCCCccceEEEEECCCCcEEE
Q psy14726 350 LFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI---GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 426 (712)
Q Consensus 350 i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 426 (712)
.++.|+.+ ..+..+|..+++-... .... ...-.++... ++..++.|+.++ .+..||..+..-..
T Consensus 175 ~l~s~s~d-----g~i~vwd~~~~~~~~~--~~~h-~~~v~~l~~~~~~~~~~l~s~s~d~-----~i~vwd~~~~~~~~ 241 (464)
T 3v7d_B 175 ILVSGSTD-----RTVRVWDIKKGCCTHV--FEGH-NSTVRCLDIVEYKNIKYIVTGSRDN-----TLHVWKLPKESSVP 241 (464)
T ss_dssp EEEEEETT-----SCEEEEETTTTEEEEE--ECCC-SSCEEEEEEEESSSCEEEEEEETTS-----CEEEEECCCCCCC-
T ss_pred EEEEEeCC-----CCEEEEECCCCcEEEE--ECCC-CCccEEEEEecCCCCCEEEEEcCCC-----cEEEeeCCCCcccc
Confidence 45555532 3577889887765432 1111 1112233333 457777777543 47778877654211
Q ss_pred eC---------------------CCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCcccccee
Q psy14726 427 IA---------------------PMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDAS 485 (712)
Q Consensus 427 ~~---------------------~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~ 485 (712)
.. .+............++..++.|+.+ ..+..||..+.+-... +........
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d-----~~i~vwd~~~~~~~~~--~~~~~~~v~ 314 (464)
T 3v7d_B 242 DHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYD-----NTLIVWDVAQMKCLYI--LSGHTDRIY 314 (464)
T ss_dssp -----CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETT-----SCEEEEETTTTEEEEE--ECCCSSCEE
T ss_pred cccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCC-----CeEEEEECCCCcEEEE--ecCCCCCEE
Confidence 00 0001111122234456666777654 4588999877654322 111111122
Q ss_pred EEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCC
Q psy14726 486 ATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTK 563 (712)
Q Consensus 486 ~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~ 563 (712)
.+.+ ++..++.|+.++ .+..||..+++-.. .+.........+..++..++.|+.+ ..+..||..+.
T Consensus 315 ~~~~~~~~~~l~sg~~dg-----~i~vwd~~~~~~~~--~~~~h~~~v~~~~~~~~~l~s~s~d-----g~v~vwd~~~~ 382 (464)
T 3v7d_B 315 STIYDHERKRCISASMDT-----TIRIWDLENGELMY--TLQGHTALVGLLRLSDKFLVSAAAD-----GSIRGWDANDY 382 (464)
T ss_dssp EEEEETTTTEEEEEETTS-----CEEEEETTTTEEEE--EECCCSSCEEEEEECSSEEEEEETT-----SEEEEEETTTC
T ss_pred EEEEcCCCCEEEEEeCCC-----cEEEEECCCCcEEE--EEeCCCCcEEEEEEcCCEEEEEeCC-----CcEEEEECCCC
Confidence 2222 566777777653 58899988775322 2222233344555667777777754 46889998875
Q ss_pred cEEEcCCCCCCccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeEEE
Q psy14726 564 TWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYE 614 (712)
Q Consensus 564 ~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 614 (712)
.-...... .......+...++.+++.|+ ++ .+.+||..+++-..
T Consensus 383 ~~~~~~~~-~~~~~~~~~~~~~~~l~~~~-dg-----~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 383 SRKFSYHH-TNLSAITTFYVSDNILVSGS-EN-----QFNIYNLRSGKLVH 426 (464)
T ss_dssp CEEEEEEC-TTCCCEEEEEECSSEEEEEE-TT-----EEEEEETTTCCEEE
T ss_pred ceeeeecC-CCCccEEEEEeCCCEEEEec-CC-----eEEEEECCCCcEEe
Confidence 43222111 11222334445777777777 33 68999999887654
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=97.07 E-value=0.048 Score=53.34 Aligned_cols=214 Identities=15% Similarity=0.054 Sum_probs=111.6
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV 441 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~ 441 (712)
..+..+|+.+........... ..-+++++. ++.+|+... ...+++||+.+.....+.... ...-.+++.
T Consensus 46 ~~i~~~~~~~~~~~~~~~~~~---~~p~~i~~~~~g~l~v~~~------~~~i~~~d~~~~~~~~~~~~~-~~~p~~i~~ 115 (270)
T 1rwi_B 46 GRVVKLATGSTGTTVLPFNGL---YQPQGLAVDGAGTVYVTDF------NNRVVTLAAGSNNQTVLPFDG-LNYPEGLAV 115 (270)
T ss_dssp CEEEEECC-----EECCCCSC---CSCCCEEECTTCCEEEEET------TTEEEEECTTCSCCEECCCCS-CSSEEEEEE
T ss_pred CcEEEecCCCcccceEeeCCc---CCcceeEECCCCCEEEEcC------CCEEEEEeCCCceEeeeecCC-cCCCcceEE
Confidence 467788887766554322211 122345554 567887754 246899999887655443211 122334444
Q ss_pred E-CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE-CCEEEEEcccCCCCccCceEEeeCCCCeeE
Q psy14726 442 H-HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL-QGKIYITGGFNGHNCLNSCEVYDPECNQWT 519 (712)
Q Consensus 442 ~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 519 (712)
- +|++|+.... ...+.+||..+........... ..-.+++.- ++++|+....+ ..+.+||+.+..-.
T Consensus 116 ~~~g~l~v~~~~-----~~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~~~~g~l~v~~~~~-----~~i~~~~~~~~~~~ 184 (270)
T 1rwi_B 116 DTQGAVYVADRG-----NNRVVKLAAGSKTQTVLPFTGL-NDPDGVAVDNSGNVYVTDTDN-----NRVVKLEAESNNQV 184 (270)
T ss_dssp CTTCCEEEEEGG-----GTEEEEECTTCCSCEECCCCSC-CSCCCEEECTTCCEEEEEGGG-----TEEEEECTTTCCEE
T ss_pred CCCCCEEEEECC-----CCEEEEEECCCceeEeeccccC-CCceeEEEeCCCCEEEEECCC-----CEEEEEecCCCceE
Confidence 3 6789987532 2468888877665543321111 111223332 57899876432 46899998877644
Q ss_pred EeCCCCCCCcceEEEEE-CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE-CCEEEEEcccCCCc
Q psy14726 520 LIEPMRHRRSGVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNGVT 597 (712)
Q Consensus 520 ~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~ 597 (712)
....... ..-.+++.. ++.||+.... ...+.+||+....-...... ....-.+++.- ++.||+....+
T Consensus 185 ~~~~~~~-~~p~~i~~d~~g~l~v~~~~-----~~~v~~~~~~~~~~~~~~~~-~~~~p~~i~~~~~g~l~v~~~~~--- 254 (270)
T 1rwi_B 185 VLPFTDI-TAPWGIAVDEAGTVYVTEHN-----TNQVVKLLAGSTTSTVLPFT-GLNTPLAVAVDSDRTVYVADRGN--- 254 (270)
T ss_dssp ECCCSSC-CSEEEEEECTTCCEEEEETT-----TSCEEEECTTCSCCEECCCC-SCSCEEEEEECTTCCEEEEEGGG---
T ss_pred eecccCC-CCceEEEECCCCCEEEEECC-----CCcEEEEcCCCCcceeeccC-CCCCceeEEECCCCCEEEEECCC---
Confidence 3321111 112233333 4689887643 25689999876543332211 11122333332 57788876543
Q ss_pred eeeeEEEEECCC
Q psy14726 598 TIYHVECYDEKT 609 (712)
Q Consensus 598 ~~~~v~~yd~~~ 609 (712)
+.|.+|++..
T Consensus 255 --~~v~~~~~~~ 264 (270)
T 1rwi_B 255 --DRVVKLTSLE 264 (270)
T ss_dssp --TEEEEECCCG
T ss_pred --CEEEEEcCCC
Confidence 2677777654
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=97.05 E-value=0.22 Score=49.04 Aligned_cols=195 Identities=10% Similarity=0.047 Sum_probs=104.9
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCC----CCcceeEEEE--ECCeEEEEcccCCCCCCceeEEeecCCC
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMN----FKRCYVSTAV--HHDVIYAMGGYNGQRRQNSVEKYNYTEN 469 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~----~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~ 469 (712)
++.+|+.+.. ...+.+||+.......++... ....-.++++ -++++|+.+.. ....+.+||+...
T Consensus 40 ~g~l~v~~~~-----~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~----~~~~i~~~d~~g~ 110 (286)
T 1q7f_A 40 QNDIIVADTN-----NHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS----PTHQIQIYNQYGQ 110 (286)
T ss_dssp TCCEEEEEGG-----GTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG----GGCEEEEECTTSC
T ss_pred CCCEEEEECC-----CCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCC----CCCEEEEECCCCc
Confidence 5678877542 246889998855444443211 1122345555 36799998632 1256899996554
Q ss_pred ceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CCEEEEEcCC
Q psy14726 470 QWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HECIYVIGGF 546 (712)
Q Consensus 470 ~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~ 546 (712)
.-..+.... . .......+ ++++|+....+ ..+.+||+.......+........-.+++.. ++.||+.+..
T Consensus 111 ~~~~~~~~~-~-~~~~~i~~~~~g~l~v~~~~~-----~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~ 183 (286)
T 1q7f_A 111 FVRKFGATI-L-QHPRGVTVDNKGRIIVVECKV-----MRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNR 183 (286)
T ss_dssp EEEEECTTT-C-SCEEEEEECTTSCEEEEETTT-----TEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGG
T ss_pred EEEEecCcc-C-CCceEEEEeCCCCEEEEECCC-----CEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEEEEECC
Confidence 433332211 1 11222333 67899876432 4689999876655444321111111223322 5789988643
Q ss_pred CCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCeEEEc
Q psy14726 547 NGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 547 ~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
...+.+||+.......+........-.+++.- ++.+|+.+..++ ..+.+||+....-..+
T Consensus 184 -----~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~----~~i~~~~~~g~~~~~~ 244 (286)
T 1q7f_A 184 -----AHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNN----FNLTIFTQDGQLISAL 244 (286)
T ss_dssp -----GTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSS----CEEEEECTTSCEEEEE
T ss_pred -----CCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCC----EEEEEECCCCCEEEEE
Confidence 36799999876654544321111112233332 678888764321 1688999876543333
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=97.05 E-value=0.092 Score=55.52 Aligned_cols=230 Identities=7% Similarity=-0.068 Sum_probs=126.1
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV 441 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~ 441 (712)
..+..+|.....-..+... ...-.+.+.. +++.+++++.+++ ...++.+|..+++...+...+. ...+.+.
T Consensus 159 ~~i~i~d~~g~~~~~l~~~----~~~v~~~~~Spdg~~la~~s~~~~--~~~i~~~d~~tg~~~~l~~~~~--~~~~~~~ 230 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRS----PQPLMSPAWSPDGSKLAYVTFESG--RSALVIQTLANGAVRQVASFPR--HNGAPAF 230 (415)
T ss_dssp EEEEEEETTSCSCEEEEEE----SSCEEEEEECTTSSEEEEEECTTS--SCEEEEEETTTCCEEEEECCSS--CEEEEEE
T ss_pred ceEEEEcCCCCCCEEEeCC----CCcceeeEEcCCCCEEEEEEecCC--CcEEEEEECCCCcEEEeecCCC--cccCEEE
Confidence 5788888876544433211 1112223333 5666666665432 2579999999998876654432 2223333
Q ss_pred -ECCe-EEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCe
Q psy14726 442 -HHDV-IYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQ 517 (712)
Q Consensus 442 -~~~~-iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 517 (712)
-+|+ |++.+..++ ...++.+|+.+.+...+...+ .......+ +|+.+++++..+ ....++.+|..+++
T Consensus 231 spdg~~la~~~~~~g---~~~i~~~d~~~~~~~~l~~~~---~~~~~~~~spdg~~l~~~s~~~--g~~~i~~~d~~~~~ 302 (415)
T 2hqs_A 231 SPDGSKLAFALSKTG---SLNLYVMDLASGQIRQVTDGR---SNNTEPTWFPDSQNLAFTSDQA--GRPQVYKVNINGGA 302 (415)
T ss_dssp CTTSSEEEEEECTTS---SCEEEEEETTTCCEEECCCCS---SCEEEEEECTTSSEEEEEECTT--SSCEEEEEETTSSC
T ss_pred cCCCCEEEEEEecCC---CceEEEEECCCCCEEeCcCCC---CcccceEECCCCCEEEEEECCC--CCcEEEEEECCCCC
Confidence 3555 444443322 357999999998876654322 11222333 565444444321 13478899998877
Q ss_pred eEEeCCCCCCCcceEEEE-ECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE-CCEEEEEcccCC
Q psy14726 518 WTLIEPMRHRRSGVSCIA-YHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNG 595 (712)
Q Consensus 518 W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~ 595 (712)
-..+... .......+. -+++.+++++.++. ...++.+|+.+.+...+.... ...+.+.. +++.+++++.++
T Consensus 303 ~~~l~~~--~~~~~~~~~spdG~~l~~~~~~~g--~~~i~~~d~~~~~~~~l~~~~---~~~~~~~spdg~~l~~~s~~~ 375 (415)
T 2hqs_A 303 PQRITWE--GSQNQDADVSSDGKFMVMVSSNGG--QQHIAKQDLATGGVQVLSSTF---LDETPSLAPNGTMVIYSSSQG 375 (415)
T ss_dssp CEECCCS--SSEEEEEEECTTSSEEEEEEECSS--CEEEEEEETTTCCEEECCCSS---SCEEEEECTTSSEEEEEEEET
T ss_pred EEEEecC--CCcccCeEECCCCCEEEEEECcCC--ceEEEEEECCCCCEEEecCCC---CcCCeEEcCCCCEEEEEEcCC
Confidence 5554321 112222222 25554444443211 357999999999887765432 22223322 667666666544
Q ss_pred CceeeeEEEEECCCCeEEEccC
Q psy14726 596 VTTIYHVECYDEKTDEWYEATD 617 (712)
Q Consensus 596 ~~~~~~v~~yd~~~~~W~~~~~ 617 (712)
. ...++++|+.++....++.
T Consensus 376 ~--~~~l~~~d~~g~~~~~l~~ 395 (415)
T 2hqs_A 376 M--GSVLNLVSTDGRFKARLPA 395 (415)
T ss_dssp T--EEEEEEEETTSCCEEECCC
T ss_pred C--ccEEEEEECCCCcEEEeeC
Confidence 3 2378999998887766643
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.05 E-value=0.014 Score=67.16 Aligned_cols=241 Identities=11% Similarity=0.199 Sum_probs=126.4
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-C--CEEEEEeecCCCCccceEEEEECCCCcE
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-G--YNIYVIGGFDGNEYYNSCRCFNAVTKVW 424 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~--~~lyv~GG~~~~~~~~~v~~yd~~~~~W 424 (712)
+..++.||.+ ..|..||...+.+..+...... ...-.+++.. + +..++.||.++ .+..||..+++|
T Consensus 21 g~~latg~~d-----g~I~vwd~~~~~~~~~~~l~~h-~~~V~~l~~s~~~~~~~l~s~s~Dg-----~I~vwd~~~~~~ 89 (753)
T 3jro_A 21 GKRLATCSSD-----KTIKIFEVEGETHKLIDTLTGH-EGPVWRVDWAHPKFGTILASCSYDG-----KVLIWKEENGRW 89 (753)
T ss_dssp SCCEEEEETT-----TEEEEEEEETTEEEEEEEECCC-SSCEEEEEECCTTSCSEEEEEETTS-----CEEEEEEETTEE
T ss_pred CCeEEEEECC-----CcEEEEecCCCCCccceeccCC-cCceEEEEecCCCCCCEEEEEeCCC-----eEEEEECCCCcc
Confidence 3355666642 3677888776666553221111 1122233332 3 67778887643 588999999988
Q ss_pred EEeCCCCCCcceeEEEEE--C--CeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE-----------
Q psy14726 425 KEIAPMNFKRCYVSTAVH--H--DVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL----------- 489 (712)
Q Consensus 425 ~~~~~~~~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~----------- 489 (712)
..+..+.........+.+ + +.+++.||.+ ..+..||..+..-.....+........++.+
T Consensus 90 ~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~d-----g~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~ 164 (753)
T 3jro_A 90 SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD-----GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEH 164 (753)
T ss_dssp EEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC-------
T ss_pred cccccccCCCCCeEEEEECCCCCCCEEEEEeCC-----CcEEEEEeecCCCcceeEeecCCCceEEEEecCccccccccc
Confidence 766554433333333333 3 6777888754 4688888776632111111111111112222
Q ss_pred ----CCEEEEEcccCCCCccCceEEeeCCCC--eeEEeCCCCCCCcceEEEEE--C---CEEEEEcCCCCCCccceEEEE
Q psy14726 490 ----QGKIYITGGFNGHNCLNSCEVYDPECN--QWTLIEPMRHRRSGVSCIAY--H---ECIYVIGGFNGMSRMCNGEKY 558 (712)
Q Consensus 490 ----~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~---~~iyv~GG~~~~~~~~~v~~y 558 (712)
++.+++.|+.++ .+..||..++ .+.....+.........+.+ + +.+++.||.+ ..+..|
T Consensus 165 ~~~~d~~~l~sgs~dg-----~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~D-----g~I~iw 234 (753)
T 3jro_A 165 NGTKESRKFVTGGADN-----LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQD-----RTCIIW 234 (753)
T ss_dssp --CGGGCCEEEEETTS-----CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESS-----SCEEEE
T ss_pred ccCCCCCEEEEEECCC-----eEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecC-----CEEEEe
Confidence 356777777664 4667766543 45544433322222233333 3 6888888865 457788
Q ss_pred eCCCCc--EEEc-CCCC-CCccceEEEE-ECCEEEEEcccCCCceeeeEEEEECC-CCeEEEccCCC
Q psy14726 559 NPVTKT--WSQV-PDMY-NPRSNFAIEV-IDDMIFAIGGFNGVTTIYHVECYDEK-TDEWYEATDMN 619 (712)
Q Consensus 559 d~~~~~--W~~~-~~~p-~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~-~~~W~~~~~~p 619 (712)
|..+.+ +... .... ....-.+++. -++..++.||.++ .+.+||.. .+.|.......
T Consensus 235 d~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg-----~I~vwd~~~~~~~~~~~~~~ 296 (753)
T 3jro_A 235 TQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDN-----KVTLWKENLEGKWEPAGEVH 296 (753)
T ss_dssp EESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSS-----CEECCBCCSSSCCBCCCCBC
T ss_pred cCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCC-----EEEEEecCCCCCcccccccc
Confidence 877642 1111 1111 1111112222 2677888888765 57788877 46777665443
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=97.02 E-value=0.18 Score=58.37 Aligned_cols=238 Identities=10% Similarity=0.089 Sum_probs=132.5
Q ss_pred eEEEEECCCCcEEEcccCC-CC----CCCcceEEEEE-CCE-EEEEeecCCCCccceEEEEECCCCcEEEeCCCCC--C-
Q psy14726 364 FVETYDTRADRWVKIEQVD-PM----GPRAYHGTAVI-GYN-IYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNF--K- 433 (712)
Q Consensus 364 ~v~~~d~~~~~W~~~~~~~-~~----~~r~~~~~~~~-~~~-lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~--~- 433 (712)
-+..||+.++.+....... .+ ....-.+++.. ++. |++ |.. ...+++||+.++++........ +
T Consensus 378 Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWi-gt~-----~~Gl~~~d~~~~~~~~~~~~~~~l~~ 451 (795)
T 4a2l_A 378 GLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYI-GTH-----AGGLSILHRNSGQVENFNQRNSQLVN 451 (795)
T ss_dssp CEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEE-EET-----TTEEEEEETTTCCEEEECTTTSCCSC
T ss_pred CeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEE-EeC-----cCceeEEeCCCCcEEEeecCCCCcCC
Confidence 4778888888887653221 00 11222344443 556 665 332 1358999999999887754211 1
Q ss_pred cceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccC--Ccc--ccceeEEEE--CCEEEEEcccCCCCccC
Q psy14726 434 RCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPM--NVE--RSDASATTL--QGKIYITGGFNGHNCLN 506 (712)
Q Consensus 434 r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~--p~~--r~~~~~~~~--~~~iyv~GG~~~~~~~~ 506 (712)
..-.+++. -+|.|++... ..+.+||+.+++|+..... +.. .....+... +|.|++... .
T Consensus 452 ~~v~~i~~d~~g~lwigt~-------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-------~ 517 (795)
T 4a2l_A 452 ENVYAILPDGEGNLWLGTL-------SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-------E 517 (795)
T ss_dssp SCEEEEEECSSSCEEEEES-------SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-------S
T ss_pred CeeEEEEECCCCCEEEEec-------CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-------C
Confidence 11122222 2567777532 3489999999999877533 111 111122222 577887543 2
Q ss_pred ceEEeeCCCCeeEEeCCC---C-CCC-cceEEEE-ECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcC---CCCCCccc
Q psy14726 507 SCEVYDPECNQWTLIEPM---R-HRR-SGVSCIA-YHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVP---DMYNPRSN 577 (712)
Q Consensus 507 ~v~~yd~~~~~W~~~~~~---p-~~r-~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~---~~p~~r~~ 577 (712)
.+.+||+.++++ ..... + .+- .-.+++. .+|.|++... ..+.+||+.++++.... .+|....
T Consensus 518 Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-------~Gl~~~d~~~~~~~~~~~~~gl~~~~i- 588 (795)
T 4a2l_A 518 GLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-------EGFYCFNEKDKQIKRYNTTNGLPNNVV- 588 (795)
T ss_dssp CEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-------SCEEEEETTTTEEEEECGGGTCSCSCE-
T ss_pred ceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-------CCceeECCCCCcEEEeCCCCCCchhhe-
Confidence 488999999888 44311 1 111 1122222 2577887542 25889999999988763 2333222
Q ss_pred eEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCeEEEcc---CCCCcccceEEEEE--cCcceeE
Q psy14726 578 FAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEAT---DMNIYRSALSACVI--MGLPNVY 637 (712)
Q Consensus 578 ~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~---~~p~~r~~~~~~~~--~~~~~v~ 637 (712)
.+++.- +|.|++.+. +.+.+|||+++++.... .++...+...++.. ++.+++.
T Consensus 589 ~~i~~d~~g~lWi~t~-------~Gl~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~g 647 (795)
T 4a2l_A 589 YGILEDSFGRLWLSTN-------RGISCFNPETEKFRNFTESDGLQSNQFNTASYCRTSVGQMYFG 647 (795)
T ss_dssp EEEEECTTSCEEEEET-------TEEEEEETTTTEEEEECGGGTCSCSCEEEEEEEECTTSCEEEE
T ss_pred EEEEECCCCCEEEEcC-------CceEEEcCCCCcEEEcCCcCCCccccCccCceeECCCCeEEEe
Confidence 233322 577877652 25789999999987652 35555443333333 3455554
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=97.02 E-value=0.18 Score=51.45 Aligned_cols=226 Identities=11% Similarity=0.127 Sum_probs=113.6
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCc--E
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKV--W 424 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~--W 424 (712)
+..++.|+.+ ..+..+|..+..-... .+.. ...-.+++.. ++..++.||.+ ..+..||..+.. .
T Consensus 67 ~~~l~s~s~D-----g~v~iWd~~~~~~~~~--~~~~-~~~v~~~~~s~~~~~l~s~~~d-----~~v~iw~~~~~~~~~ 133 (340)
T 1got_B 67 SRLLLSASQD-----GKLIIWDSYTTNKVHA--IPLR-SSWVMTCAYAPSGNYVACGGLD-----NICSIYNLKTREGNV 133 (340)
T ss_dssp SSEEEEEETT-----TEEEEEETTTCCEEEE--EECS-SSCEEEEEECTTSSEEEEEETT-----CEEEEEETTTCSBSC
T ss_pred CCEEEEEeCC-----CcEEEEECCCCCcceE--eecC-CccEEEEEECCCCCEEEEEeCC-----CeEEEEECccCCCcc
Confidence 3455556532 3577888776654331 1111 1111222222 56677778754 457888877643 1
Q ss_pred EEeCCCCCCc-ceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccC
Q psy14726 425 KEIAPMNFKR-CYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFN 500 (712)
Q Consensus 425 ~~~~~~~~~r-~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~ 500 (712)
.....+.... .-.++.. -++. ++.|+.+ ..+..||+.+.+-... +........++.+ ++++++.||.+
T Consensus 134 ~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d-----~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~sg~~d 205 (340)
T 1got_B 134 RVSRELAGHTGYLSCCRFLDDNQ-IVTSSGD-----TTCALWDIETGQQTTT--FTGHTGDVMSLSLAPDTRLFVSGACD 205 (340)
T ss_dssp EEEEEEECCSSCEEEEEEEETTE-EEEEETT-----SCEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred eeEEEecCCCccEEEEEECCCCc-EEEEECC-----CcEEEEECCCCcEEEE--EcCCCCceEEEEECCCCCEEEEEeCC
Confidence 1111111111 1112222 3455 4455433 4688899887764322 1111111122223 67788888866
Q ss_pred CCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccce
Q psy14726 501 GHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNF 578 (712)
Q Consensus 501 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~ 578 (712)
+ .+..||..+..-... +.........+.+ ++..++.|+.+ ..+..||..+.+-...-..+......
T Consensus 206 ~-----~v~~wd~~~~~~~~~--~~~h~~~v~~v~~~p~~~~l~s~s~d-----~~v~iwd~~~~~~~~~~~~~~~~~~v 273 (340)
T 1got_B 206 A-----SAKLWDVREGMCRQT--FTGHESDINAICFFPNGNAFATGSDD-----ATCRLFDLRADQELMTYSHDNIICGI 273 (340)
T ss_dssp S-----CEEEEETTTCSEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEEECCTTCCSCE
T ss_pred C-----cEEEEECCCCeeEEE--EcCCcCCEEEEEEcCCCCEEEEEcCC-----CcEEEEECCCCcEEEEEccCCcccce
Confidence 4 578888877653222 1111111222222 56777778754 46788998876533221111111222
Q ss_pred EEEEE--CCEEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 579 AIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 579 ~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
..+.+ ++.+++.|+.++ .+.+||..+..
T Consensus 274 ~~~~~s~~g~~l~~g~~d~-----~i~vwd~~~~~ 303 (340)
T 1got_B 274 TSVSFSKSGRLLLAGYDDF-----NCNVWDALKAD 303 (340)
T ss_dssp EEEEECTTSSEEEEEETTS-----EEEEEETTTCC
T ss_pred EEEEECCCCCEEEEECCCC-----eEEEEEcccCc
Confidence 23333 677888888765 67888876643
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.96 E-value=0.1 Score=52.89 Aligned_cols=210 Identities=11% Similarity=0.118 Sum_probs=109.1
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV 441 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~ 441 (712)
..+..+|..+++-...-... +....+++.. ++..++.|+.+ ..+..||..+++-...-.... ..-.+++.
T Consensus 102 ~~i~lWd~~~~~~~~~~~~~---~~~~~~~~~spdg~~l~~g~~d-----g~v~i~~~~~~~~~~~~~~~~-~~v~~~~~ 172 (321)
T 3ow8_A 102 AHIRLWDLENGKQIKSIDAG---PVDAWTLAFSPDSQYLATGTHV-----GKVNIFGVESGKKEYSLDTRG-KFILSIAY 172 (321)
T ss_dssp SEEEEEETTTTEEEEEEECC---TTCCCCEEECTTSSEEEEECTT-----SEEEEEETTTCSEEEEEECSS-SCEEEEEE
T ss_pred CcEEEEECCCCCEEEEEeCC---CccEEEEEECCCCCEEEEEcCC-----CcEEEEEcCCCceeEEecCCC-ceEEEEEE
Confidence 36778888877644311111 1111223333 56667777643 457888887765432211111 11122222
Q ss_pred -ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCee
Q psy14726 442 -HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQW 518 (712)
Q Consensus 442 -~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 518 (712)
.+++.++.|+.+ ..+..||..+.+-... +........++.+ ++++++.|+.++ .+..||..+...
T Consensus 173 spdg~~lasg~~d-----g~i~iwd~~~~~~~~~--~~~h~~~v~~l~~spd~~~l~s~s~dg-----~i~iwd~~~~~~ 240 (321)
T 3ow8_A 173 SPDGKYLASGAID-----GIINIFDIATGKLLHT--LEGHAMPIRSLTFSPDSQLLVTASDDG-----YIKIYDVQHANL 240 (321)
T ss_dssp CTTSSEEEEEETT-----SCEEEEETTTTEEEEE--ECCCSSCCCEEEECTTSCEEEEECTTS-----CEEEEETTTCCE
T ss_pred CCCCCEEEEEcCC-----CeEEEEECCCCcEEEE--EcccCCceeEEEEcCCCCEEEEEcCCC-----eEEEEECCCcce
Confidence 367777887754 4588999887753221 1111111122333 677888887664 588888877654
Q ss_pred EEeCCCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE--CCEEEEEcccC
Q psy14726 519 TLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFN 594 (712)
Q Consensus 519 ~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~ 594 (712)
... +.........+.+ ++..++.|+.+ ..+..||..+.+-... +.........+.+ ++..++.||.+
T Consensus 241 ~~~--~~~h~~~v~~~~~sp~~~~l~s~s~D-----~~v~iwd~~~~~~~~~--~~~h~~~v~~v~~s~~g~~l~s~~~d 311 (321)
T 3ow8_A 241 AGT--LSGHASWVLNVAFCPDDTHFVSSSSD-----KSVKVWDVGTRTCVHT--FFDHQDQVWGVKYNGNGSKIVSVGDD 311 (321)
T ss_dssp EEE--ECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred eEE--EcCCCCceEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCEEEEE--EcCCCCcEEEEEECCCCCEEEEEeCC
Confidence 322 1111122222223 56677777754 4688899887643322 1111112222233 56677788876
Q ss_pred CCceeeeEEEEEC
Q psy14726 595 GVTTIYHVECYDE 607 (712)
Q Consensus 595 ~~~~~~~v~~yd~ 607 (712)
+ .+.+||.
T Consensus 312 ~-----~i~vwd~ 319 (321)
T 3ow8_A 312 Q-----EIHIYDC 319 (321)
T ss_dssp C-----CEEEEEC
T ss_pred C-----eEEEEeC
Confidence 5 4566663
|
| >3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=96.96 E-value=0.056 Score=62.52 Aligned_cols=211 Identities=9% Similarity=0.041 Sum_probs=120.3
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCC----Cccee
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNF----KRCYV 437 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~----~r~~~ 437 (712)
..+..||+.++++..+.....+ ...-.+++.. ++.|++... ..+++||+.+++|......+. ...-.
T Consensus 427 ~Gl~~~~~~~~~~~~~~~~~~~-~~~v~~i~~d~~g~lwigt~-------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~ 498 (781)
T 3v9f_A 427 GNISYYNTRLKKFQIIELEKNE-LLDVRVFYEDKNKKIWIGTH-------AGVFVIDLASKKVIHHYDTSNSQLLENFVR 498 (781)
T ss_dssp EEEEEECSSSCEEEECCSTTTC-CCCEEEEEECTTSEEEEEET-------TEEEEEESSSSSCCEEECTTTSSCSCSCEE
T ss_pred CCEEEEcCCCCcEEEeccCCCC-CCeEEEEEECCCCCEEEEEC-------CceEEEeCCCCeEEecccCcccccccceeE
Confidence 3578899988888875322111 1222233333 567776432 458999999999876643321 11112
Q ss_pred EEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCC-ccccceeEEEE--CCEEEEEcccCCCCccCce-EEee
Q psy14726 438 STAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMN-VERSDASATTL--QGKIYITGGFNGHNCLNSC-EVYD 512 (712)
Q Consensus 438 ~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p-~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v-~~yd 512 (712)
+++. -+|.|++... . .-+++||+.+++++...... .+.....+... +|.|++... +-+ .+||
T Consensus 499 ~i~~d~~g~lWigt~-~-----~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-------~Glv~~~d 565 (781)
T 3v9f_A 499 SIAQDSEGRFWIGTF-G-----GGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG-------EGLVCFPS 565 (781)
T ss_dssp EEEECTTCCEEEEES-S-----SCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET-------TEEEEESC
T ss_pred EEEEcCCCCEEEEEc-C-----CCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC-------CCceEEEC
Confidence 2222 3567877421 1 24889999999988764311 11111112222 577887532 236 8999
Q ss_pred CCCCeeEEeC---CCCCCCcceEEEEE-CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcC---CCCCCccceEEE-EE-
Q psy14726 513 PECNQWTLIE---PMRHRRSGVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVP---DMYNPRSNFAIE-VI- 583 (712)
Q Consensus 513 ~~~~~W~~~~---~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~---~~p~~r~~~~~~-~~- 583 (712)
+.+++++... .+|.... .+++.. +|.|++.+. ..+.+|||.+.++.... .++.......++ ..
T Consensus 566 ~~~~~~~~~~~~~gl~~~~i-~~i~~d~~g~lW~~t~-------~Gl~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~ 637 (781)
T 3v9f_A 566 ARNFDYQVFQRKEGLPNTHI-RAISEDKNGNIWASTN-------TGISCYITSKKCFYTYDHSNNIPQGSFISGCVTKDH 637 (781)
T ss_dssp TTTCCCEEECGGGTCSCCCC-CEEEECSSSCEEEECS-------SCEEEEETTTTEEEEECGGGTCCSSCEEEEEEEECT
T ss_pred CCCCcEEEccccCCCCCceE-EEEEECCCCCEEEEcC-------CceEEEECCCCceEEecccCCccccccccCceEECC
Confidence 9999888775 3443332 233333 578888763 46889999999888763 244333332333 33
Q ss_pred CCEEEEEcccCCCceeeeEEEEECCC
Q psy14726 584 DDMIFAIGGFNGVTTIYHVECYDEKT 609 (712)
Q Consensus 584 ~~~i~v~GG~~~~~~~~~v~~yd~~~ 609 (712)
+|.|| +||.+| +..|||+.
T Consensus 638 ~G~l~-~g~~~G------l~~f~p~~ 656 (781)
T 3v9f_A 638 NGLIY-FGSING------LCFFNPDI 656 (781)
T ss_dssp TSCEE-EEETTE------EEEECSCC
T ss_pred CCEEE-EECCCc------eEEEChhh
Confidence 45554 466543 66777764
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=96.96 E-value=0.22 Score=51.00 Aligned_cols=250 Identities=8% Similarity=0.043 Sum_probs=115.1
Q ss_pred ceEEEEeecCCCCCC-ceEEEEECCCCcEEEcccCCCCCCCcceEEEEE--CCEEEEEeecCCCCccceEEEEECCCCcE
Q psy14726 348 EILFAIGGWSGGSPT-DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKVW 424 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~-~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W 424 (712)
...+++|.+..+... -.++.+|+.++++..+.......|+ .+++. +..||+.+........-.+|.+|..+++.
T Consensus 13 ~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~---~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~ 89 (361)
T 3scy_A 13 ELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPS---YLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTL 89 (361)
T ss_dssp EEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCC---SEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEE
T ss_pred ceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCc---eEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcE
Confidence 445667876543221 1355667888887765332111122 23333 34566665432111122346667766777
Q ss_pred EEeCCCCC-CcceeEEEEECC-eEEEEcccCCCCCCceeEEeecCCCc-eEEcc-------cCCcc----ccc-eeEEEE
Q psy14726 425 KEIAPMNF-KRCYVSTAVHHD-VIYAMGGYNGQRRQNSVEKYNYTENQ-WSLIA-------PMNVE----RSD-ASATTL 489 (712)
Q Consensus 425 ~~~~~~~~-~r~~~~~~~~~~-~iyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~-------~~p~~----r~~-~~~~~~ 489 (712)
..+...+. ......++. ++ .+|+.+.. ...+.+|+..++. ...+. .-+.+ ... |+++.-
T Consensus 90 ~~~~~~~~~~~~p~~~~~-dg~~l~~~~~~-----~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~s 163 (361)
T 3scy_A 90 HLLNTQKTMGADPCYLTT-NGKNIVTANYS-----GGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRIT 163 (361)
T ss_dssp EEEEEEECSSSCEEEEEE-CSSEEEEEETT-----TTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEEC
T ss_pred EEeeEeccCCCCcEEEEE-CCCEEEEEECC-----CCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEEC
Confidence 76654432 222233344 55 46655421 2467888875432 11110 01110 111 223322
Q ss_pred -CC-EEEEEcccCCCCccCceEEeeCCCCe-------eEEe-----CCCCCCCcceEEEEE-CC-EEEEEcCCCCCCccc
Q psy14726 490 -QG-KIYITGGFNGHNCLNSCEVYDPECNQ-------WTLI-----EPMRHRRSGVSCIAY-HE-CIYVIGGFNGMSRMC 553 (712)
Q Consensus 490 -~~-~iyv~GG~~~~~~~~~v~~yd~~~~~-------W~~~-----~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~ 553 (712)
++ .+|+.+..+ +.+.+|+..... .... ...+....-..++.. ++ .+|+.+.. ..
T Consensus 164 pdg~~l~~~~~~~-----~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~-----~~ 233 (361)
T 3scy_A 164 PDGKYLLADDLGT-----DQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEI-----GG 233 (361)
T ss_dssp TTSSEEEEEETTT-----TEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT-----TC
T ss_pred CCCCEEEEEeCCC-----CEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCC-----CC
Confidence 55 477765322 356677554433 2111 112211111222222 44 57777632 25
Q ss_pred eEEEEeCCCCcEEEcC---CCCCCccceEEEEE--CCE-EEEEcccCCCceeeeEEEEE--CCCCeEEEccCCCC
Q psy14726 554 NGEKYNPVTKTWSQVP---DMYNPRSNFAIEVI--DDM-IFAIGGFNGVTTIYHVECYD--EKTDEWYEATDMNI 620 (712)
Q Consensus 554 ~v~~yd~~~~~W~~~~---~~p~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~v~~yd--~~~~~W~~~~~~p~ 620 (712)
.+.+||..++++..+. ..+........+.+ +++ ||+.+.... +.+.+|+ +.++++..+..++.
T Consensus 234 ~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~----~~i~v~~~~~~~g~~~~~~~~~~ 304 (361)
T 3scy_A 234 TVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKA----DGVAIFKVDETNGTLTKVGYQLT 304 (361)
T ss_dssp EEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSS----CEEEEEEECTTTCCEEEEEEEEC
T ss_pred eEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCC----CEEEEEEEcCCCCcEEEeeEecC
Confidence 6888888877765543 22322222333333 454 555432201 2345554 46778776654443
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=96.95 E-value=0.045 Score=58.21 Aligned_cols=186 Identities=12% Similarity=0.114 Sum_probs=105.6
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA 475 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 475 (712)
++..++.|+.+ ..+..||..+.+-... +........+...++.+++.|+.+ ..+.+||..+.+-...
T Consensus 142 d~~~l~~g~~d-----g~i~iwd~~~~~~~~~--~~~h~~~v~~l~~~~~~l~sg~~d-----g~i~vwd~~~~~~~~~- 208 (435)
T 1p22_A 142 DDQKIVSGLRD-----NTIKIWDKNTLECKRI--LTGHTGSVLCLQYDERVIITGSSD-----STVRVWDVNTGEMLNT- 208 (435)
T ss_dssp CSSEEEEEESS-----SCEEEEESSSCCEEEE--ECCCSSCEEEEECCSSEEEEEETT-----SCEEEEESSSCCEEEE-
T ss_pred CCCEEEEEeCC-----CeEEEEeCCCCeEEEE--EcCCCCcEEEEEECCCEEEEEcCC-----CeEEEEECCCCcEEEE-
Confidence 56677777754 3588899887764332 111222333444588888888854 4588999888764322
Q ss_pred cCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCeeEEe-CCCCCCCcceEEEEECCEEEEEcCCCCCCccce
Q psy14726 476 PMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLI-EPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCN 554 (712)
Q Consensus 476 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~ 554 (712)
+........+...++..++.||.++ .+..||..+..-... ..+........++..++..++.|+.+ ..
T Consensus 209 -~~~h~~~v~~l~~~~~~l~s~s~dg-----~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~d-----g~ 277 (435)
T 1p22_A 209 -LIHHCEAVLHLRFNNGMMVTCSKDR-----SIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGD-----RT 277 (435)
T ss_dssp -ECCCCSCEEEEECCTTEEEEEETTS-----CEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETT-----SE
T ss_pred -EcCCCCcEEEEEEcCCEEEEeeCCC-----cEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCC-----Ce
Confidence 2222222333344566777777654 578888876542211 11111222333344466666666653 56
Q ss_pred EEEEeCCCCcEEEcCCCCCCccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeE
Q psy14726 555 GEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEW 612 (712)
Q Consensus 555 v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 612 (712)
+..||..+.+-... +........+...++..++.|+.++ .+.+||..+++-
T Consensus 278 i~vwd~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~g~~dg-----~i~iwd~~~~~~ 328 (435)
T 1p22_A 278 IKVWNTSTCEFVRT--LNGHKRGIACLQYRDRLVVSGSSDN-----TIRLWDIECGAC 328 (435)
T ss_dssp EEEEETTTCCEEEE--EECCSSCEEEEEEETTEEEEEETTS-----CEEEEETTTCCE
T ss_pred EEEEECCcCcEEEE--EcCCCCcEEEEEeCCCEEEEEeCCC-----eEEEEECCCCCE
Confidence 88999887643322 1111222334445677888888765 578899887643
|
| >3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=96.92 E-value=0.085 Score=60.93 Aligned_cols=238 Identities=9% Similarity=0.037 Sum_probs=134.0
Q ss_pred eEEEEECCCCcEEEcccC-CCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCC-cceeEEE
Q psy14726 364 FVETYDTRADRWVKIEQV-DPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFK-RCYVSTA 440 (712)
Q Consensus 364 ~v~~~d~~~~~W~~~~~~-~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~-r~~~~~~ 440 (712)
.+..||+.++.+...... .++ ...-.+++.. ++.|++ |.. ...+++||+.++++........+ ..-.+++
T Consensus 384 Gl~~~~~~~~~~~~~~~~~~~~-~~~v~~i~~d~~g~lWi-gt~-----~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~ 456 (781)
T 3v9f_A 384 GINVFENGKRVAIYNKENRELL-SNSVLCSLKDSEGNLWF-GTY-----LGNISYYNTRLKKFQIIELEKNELLDVRVFY 456 (781)
T ss_dssp CEEEEETTEEEEECC-----CC-CSBEEEEEECTTSCEEE-EET-----TEEEEEECSSSCEEEECCSTTTCCCCEEEEE
T ss_pred cEEEEECCCCeEEEccCCCCCC-CcceEEEEECCCCCEEE-Eec-----cCCEEEEcCCCCcEEEeccCCCCCCeEEEEE
Confidence 377888887776653211 111 1122233333 567776 332 14589999999999887542111 1222333
Q ss_pred EE-CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCc---cccceeEEEE--CCEEEEEcccCCCCccCceEEeeCC
Q psy14726 441 VH-HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNV---ERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPE 514 (712)
Q Consensus 441 ~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~---~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~ 514 (712)
.- +|.|++... .-+++||+.+++|......+. ......+... +|.|++... . ..+.+||+.
T Consensus 457 ~d~~g~lwigt~-------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~-----~Gl~~~~~~ 523 (781)
T 3v9f_A 457 EDKNKKIWIGTH-------AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTF-G-----GGVGIYTPD 523 (781)
T ss_dssp ECTTSEEEEEET-------TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEES-S-----SCEEEECTT
T ss_pred ECCCCCEEEEEC-------CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEc-C-----CCEEEEeCC
Confidence 32 567777422 458999999999876643321 1111112222 577887431 1 238899999
Q ss_pred CCeeEEeCC---CCCCCcceEEEE-ECCEEEEEcCCCCCCccceE-EEEeCCCCcEEEcC---CCCCCccceEEEEE-CC
Q psy14726 515 CNQWTLIEP---MRHRRSGVSCIA-YHECIYVIGGFNGMSRMCNG-EKYNPVTKTWSQVP---DMYNPRSNFAIEVI-DD 585 (712)
Q Consensus 515 ~~~W~~~~~---~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v-~~yd~~~~~W~~~~---~~p~~r~~~~~~~~-~~ 585 (712)
+++++.... ++.... .+++. -++.|++... ..+ .+||+.++++.... .+|.... .+++.- +|
T Consensus 524 ~~~~~~~~~~~~l~~~~i-~~i~~d~~g~lWi~T~-------~Glv~~~d~~~~~~~~~~~~~gl~~~~i-~~i~~d~~g 594 (781)
T 3v9f_A 524 MQLVRKFNQYEGFCSNTI-NQIYRSSKGQMWLATG-------EGLVCFPSARNFDYQVFQRKEGLPNTHI-RAISEDKNG 594 (781)
T ss_dssp CCEEEEECTTTTCSCSCE-EEEEECTTSCEEEEET-------TEEEEESCTTTCCCEEECGGGTCSCCCC-CEEEECSSS
T ss_pred CCeEEEccCCCCCCCCee-EEEEECCCCCEEEEEC-------CCceEEECCCCCcEEEccccCCCCCceE-EEEEECCCC
Confidence 999988753 222111 12222 2577887643 346 89999998887763 2343332 333333 67
Q ss_pred EEEEEcccCCCceeeeEEEEECCCCeEEEc---cCCCCcccceEEEEE--cCcceeE
Q psy14726 586 MIFAIGGFNGVTTIYHVECYDEKTDEWYEA---TDMNIYRSALSACVI--MGLPNVY 637 (712)
Q Consensus 586 ~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~---~~~p~~r~~~~~~~~--~~~~~v~ 637 (712)
.|++.+. + .+.+|||+++++... ..++...+...++.. ++.+++.
T Consensus 595 ~lW~~t~-~------Gl~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~g 644 (781)
T 3v9f_A 595 NIWASTN-T------GISCYITSKKCFYTYDHSNNIPQGSFISGCVTKDHNGLIYFG 644 (781)
T ss_dssp CEEEECS-S------CEEEEETTTTEEEEECGGGTCCSSCEEEEEEEECTTSCEEEE
T ss_pred CEEEEcC-C------ceEEEECCCCceEEecccCCccccccccCceEECCCCEEEEE
Confidence 7877642 2 478899999998776 335555544444444 3555554
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=96.92 E-value=0.23 Score=56.09 Aligned_cols=203 Identities=14% Similarity=0.153 Sum_probs=115.4
Q ss_pred EEEECCEEEEEeecCCCCccceEEEEECCCCc--EEEeCCCCCC--------cceeEEEEECCeEEEEcccCCCCCCcee
Q psy14726 392 TAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKV--WKEIAPMNFK--------RCYVSTAVHHDVIYAMGGYNGQRRQNSV 461 (712)
Q Consensus 392 ~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~~~~--------r~~~~~~~~~~~iyv~GG~~~~~~~~~v 461 (712)
-++.++.||+... ...++.+|..+++ |+.-...+.. ....+.++.+++||+... ...+
T Consensus 73 P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~------dg~l 140 (677)
T 1kb0_A 73 PVVVDGIMYVSAS------WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW------DGRL 140 (677)
T ss_dssp CEEETTEEEEECG------GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT------TSEE
T ss_pred CEEECCEEEEECC------CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC------CCEE
Confidence 3556999998865 2569999998876 8765433211 112345668899998643 2569
Q ss_pred EEeecCCCc--eEEccc-C-Cc-cccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCe--eEEeCCCCCC---C---
Q psy14726 462 EKYNYTENQ--WSLIAP-M-NV-ERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQ--WTLIEPMRHR---R--- 528 (712)
Q Consensus 462 ~~yd~~~~~--W~~~~~-~-p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~---r--- 528 (712)
+.+|..|.+ |+.-.. - +. .....+.++.++.+|+..+.........+..||..|++ |+.-...+.. .
T Consensus 141 ~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~ 220 (677)
T 1kb0_A 141 IALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDE 220 (677)
T ss_dssp EEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSH
T ss_pred EEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCcccccccc
Confidence 999998765 875432 1 11 11222345568888875543222234679999998876 8765422210 0
Q ss_pred -------------------cc----eEEEE--ECCEEEEEcCCC-------------CCCccceEEEEeCCCC--cEEEc
Q psy14726 529 -------------------SG----VSCIA--YHECIYVIGGFN-------------GMSRMCNGEKYNPVTK--TWSQV 568 (712)
Q Consensus 529 -------------------~~----~~~~~--~~~~iyv~GG~~-------------~~~~~~~v~~yd~~~~--~W~~~ 568 (712)
.+ ...+. -++.||+-.|.. +......+..+|+.+. .|..-
T Consensus 221 ~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~ 300 (677)
T 1kb0_A 221 SMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQ 300 (677)
T ss_dssp HHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEE
T ss_pred ccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEe
Confidence 00 11222 257788766531 1122457999999886 48753
Q ss_pred CCCCC---C--ccceEEE--EECC---EEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 569 PDMYN---P--RSNFAIE--VIDD---MIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 569 ~~~p~---~--r~~~~~~--~~~~---~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
..... - -....++ ..++ .++++|..++ .++++|..+++
T Consensus 301 ~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G-----~l~~lD~~tG~ 348 (677)
T 1kb0_A 301 ETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNG-----FFFVLDRTNGK 348 (677)
T ss_dssp SSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTS-----EEEEEETTTCC
T ss_pred cCCCcccccccCCCcEEEecccCCcEeeEEEEECCCC-----EEEEEECCCCC
Confidence 21100 0 0111222 1255 5677776554 57778877764
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.084 Score=55.34 Aligned_cols=227 Identities=13% Similarity=0.118 Sum_probs=114.3
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEECCEEEEEeecCCCCccceEEEEECCCCcE--E
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVW--K 425 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W--~ 425 (712)
+..++.|+.+ ..+..||..+++.... .. ...........++.+++.|+.+ ..+..||..+..- .
T Consensus 146 ~~~l~~~~~d-----g~i~iwd~~~~~~~~~--~~--~~~~~v~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~ 211 (401)
T 4aez_A 146 GSFLSVGLGN-----GLVDIYDVESQTKLRT--MA--GHQARVGCLSWNRHVLSSGSRS-----GAIHHHDVRIANHQIG 211 (401)
T ss_dssp SSEEEEEETT-----SCEEEEETTTCCEEEE--EC--CCSSCEEEEEEETTEEEEEETT-----SEEEEEETTSSSCEEE
T ss_pred CCEEEEECCC-----CeEEEEECcCCeEEEE--ec--CCCCceEEEEECCCEEEEEcCC-----CCEEEEecccCcceee
Confidence 3455555532 3578889887765442 11 1111222223356677777754 4688899874331 1
Q ss_pred EeCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE---CCEEEEEcccCC
Q psy14726 426 EIAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL---QGKIYITGGFNG 501 (712)
Q Consensus 426 ~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~ 501 (712)
.+..- ...-.+++. -++..++.|+.+ ..+.+||..+.+-... +........+..+ +..+++.||...
T Consensus 212 ~~~~~--~~~v~~~~~~~~~~~l~s~~~d-----~~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~p~~~~ll~~~~gs~ 282 (401)
T 4aez_A 212 TLQGH--SSEVCGLAWRSDGLQLASGGND-----NVVQIWDARSSIPKFT--KTNHNAAVKAVAWCPWQSNLLATGGGTM 282 (401)
T ss_dssp EEECC--SSCEEEEEECTTSSEEEEEETT-----SCEEEEETTCSSEEEE--ECCCSSCCCEEEECTTSTTEEEEECCTT
T ss_pred EEcCC--CCCeeEEEEcCCCCEEEEEeCC-----CeEEEccCCCCCccEE--ecCCcceEEEEEECCCCCCEEEEecCCC
Confidence 22111 111122222 266778888754 4688999887543221 1111111222333 446777765211
Q ss_pred CCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CC-EEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccce-
Q psy14726 502 HNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HE-CIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNF- 578 (712)
Q Consensus 502 ~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~- 578 (712)
-..+..||..+.+-...-.... .-.+++.. ++ .+++.+|.. -..+..||..+........++......
T Consensus 283 ---d~~i~i~d~~~~~~~~~~~~~~--~v~~~~~s~~~~~l~~~~g~~----dg~i~v~~~~~~~~~~~~~~~~h~~~v~ 353 (401)
T 4aez_A 283 ---DKQIHFWNAATGARVNTVDAGS--QVTSLIWSPHSKEIMSTHGFP----DNNLSIWSYSSSGLTKQVDIPAHDTRVL 353 (401)
T ss_dssp ---TCEEEEEETTTCCEEEEEECSS--CEEEEEECSSSSEEEEEECTT----TCEEEEEEEETTEEEEEEEEECCSSCCC
T ss_pred ---CCEEEEEECCCCCEEEEEeCCC--cEEEEEECCCCCeEEEEeecC----CCcEEEEecCCccceeEEEecCCCCCEE
Confidence 2468899988776433222111 11222222 33 455554432 256888888877666653332221111
Q ss_pred EEEEE-CCEEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 579 AIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 579 ~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
+++.. ++..++.||.++ .+.+||..+++
T Consensus 354 ~~~~s~dg~~l~s~~~dg-----~i~iw~~~~~~ 382 (401)
T 4aez_A 354 YSALSPDGRILSTAASDE-----NLKFWRVYDGD 382 (401)
T ss_dssp EEEECTTSSEEEEECTTS-----EEEEEECCC--
T ss_pred EEEECCCCCEEEEEeCCC-----cEEEEECCCCc
Confidence 22222 677788888765 67888887765
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=96.89 E-value=0.39 Score=47.25 Aligned_cols=230 Identities=10% Similarity=0.055 Sum_probs=119.3
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCC-C-CCCcceEEEEE--CCEEEEEeecCCCCccceEEEEECCCCc
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDP-M-GPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKV 423 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~-~-~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~ 423 (712)
+.+++.+.. ...|..||+.......+..... + ....-.++++. ++.+|+.+.. ....+.+||+....
T Consensus 41 g~l~v~~~~-----~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~----~~~~i~~~d~~g~~ 111 (286)
T 1q7f_A 41 NDIIVADTN-----NHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS----PTHQIQIYNQYGQF 111 (286)
T ss_dssp CCEEEEEGG-----GTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG----GGCEEEEECTTSCE
T ss_pred CCEEEEECC-----CCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCC----CCCEEEEECCCCcE
Confidence 456655432 2358888887544333321111 1 11223455553 6789988642 12468999965544
Q ss_pred EEEeCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccC
Q psy14726 424 WKEIAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFN 500 (712)
Q Consensus 424 W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~ 500 (712)
...+.... ...-.++++ -+|++|+.... ...+.+||+.......+.... .........+ ++++|+.+..
T Consensus 112 ~~~~~~~~-~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~~g~~~~~~~~~~-~~~~p~~i~~~~~g~l~v~~~~- 183 (286)
T 1q7f_A 112 VRKFGATI-LQHPRGVTVDNKGRIIVVECK-----VMRVIIFDQNGNVLHKFGCSK-HLEFPNGVVVNDKQEIFISDNR- 183 (286)
T ss_dssp EEEECTTT-CSCEEEEEECTTSCEEEEETT-----TTEEEEECTTSCEEEEEECTT-TCSSEEEEEECSSSEEEEEEGG-
T ss_pred EEEecCcc-CCCceEEEEeCCCCEEEEECC-----CCEEEEEcCCCCEEEEeCCCC-ccCCcEEEEECCCCCEEEEECC-
Confidence 44443221 112234444 36789987542 257899998766544442211 1112233333 5889997643
Q ss_pred CCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceE
Q psy14726 501 GHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFA 579 (712)
Q Consensus 501 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~ 579 (712)
.+.+.+||+.......+..-.....-.+++.. ++.||+....++ ..+.+||+....-..+..........+
T Consensus 184 ----~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~----~~i~~~~~~g~~~~~~~~~~~~~~~~~ 255 (286)
T 1q7f_A 184 ----AHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNN----FNLTIFTQDGQLISALESKVKHAQCFD 255 (286)
T ss_dssp ----GTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSS----CEEEEECTTSCEEEEEEESSCCSCEEE
T ss_pred ----CCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCC----EEEEEECCCCCEEEEEcccCCCCccee
Confidence 25699999876655555321111111233332 578998875321 278999986554333322111111223
Q ss_pred EEEE-CCEEEEEcccCCCceeeeEEEEECC
Q psy14726 580 IEVI-DDMIFAIGGFNGVTTIYHVECYDEK 608 (712)
Q Consensus 580 ~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~ 608 (712)
++.- ++++|+.. .+ +.+.+|+..
T Consensus 256 i~~~~~g~l~vs~-~~-----~~v~v~~~~ 279 (286)
T 1q7f_A 256 VALMDDGSVVLAS-KD-----YRLYIYRYV 279 (286)
T ss_dssp EEEETTTEEEEEE-TT-----TEEEEEECS
T ss_pred EEECCCCcEEEEC-CC-----CeEEEEEcc
Confidence 4333 78888884 22 256666653
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=96.89 E-value=0.083 Score=55.74 Aligned_cols=241 Identities=13% Similarity=0.016 Sum_probs=121.9
Q ss_pred CceEEEEeecCCCCCCceEEEEECCCCcEEEcccC-CCCCCCcceEEEEE--CCEEEEEeecCCCCccceEEEEECCCCc
Q psy14726 347 HEILFAIGGWSGGSPTDFVETYDTRADRWVKIEQV-DPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKV 423 (712)
Q Consensus 347 ~~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~-~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~ 423 (712)
.+.+++.++.+ ..+..+|..+++....... ....+......... ++.+|+.|+.+ ..+..||+.+.+
T Consensus 133 ~~~~~~~~~~~-----~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d-----~~v~~~d~~~~~ 202 (433)
T 3bws_A 133 NTRLAIPLLED-----EGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQA-----NAVHVFDLKTLA 202 (433)
T ss_dssp SSEEEEEBTTS-----SSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGG-----TEEEEEETTTCC
T ss_pred CCeEEEEeCCC-----CeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCC-----CEEEEEECCCce
Confidence 34555555422 3588899988876652111 11111112222233 77888887743 468999998876
Q ss_pred EEEeCCCCCCcceeEEEEE-C-CeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEccc
Q psy14726 424 WKEIAPMNFKRCYVSTAVH-H-DVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGF 499 (712)
Q Consensus 424 W~~~~~~~~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~ 499 (712)
....-.... ..-.+++.. + +.+|+.|+.+ ..+.+||+.+.+....-+. ... ...+.+ +++.+++++.
T Consensus 203 ~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~--~~~-~~~~~~~~~g~~l~~~~~ 273 (433)
T 3bws_A 203 YKATVDLTG-KWSKILLYDPIRDLVYCSNWIS-----EDISVIDRKTKLEIRKTDK--IGL-PRGLLLSKDGKELYIAQF 273 (433)
T ss_dssp EEEEEECSS-SSEEEEEEETTTTEEEEEETTT-----TEEEEEETTTTEEEEECCC--CSE-EEEEEECTTSSEEEEEEE
T ss_pred EEEEEcCCC-CCeeEEEEcCCCCEEEEEecCC-----CcEEEEECCCCcEEEEecC--CCC-ceEEEEcCCCCEEEEEEC
Confidence 433221111 122233333 3 3576766432 4799999988765433222 111 223333 4544444443
Q ss_pred CCCC---ccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-C-CEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCC
Q psy14726 500 NGHN---CLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-H-ECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNP 574 (712)
Q Consensus 500 ~~~~---~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~ 574 (712)
.... .-..+..||+.+++-......+. ....++.. + +.+|+.++.+ ..+..||..+.+-...- +..
T Consensus 274 ~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~g~~l~~~~~~~-----~~v~v~d~~~~~~~~~~--~~~ 344 (433)
T 3bws_A 274 SASNQESGGGRLGIYSMDKEKLIDTIGPPG--NKRHIVSGNTENKIYVSDMCC-----SKIEVYDLKEKKVQKSI--PVF 344 (433)
T ss_dssp ESCTTCSCCEEEEEEETTTTEEEEEEEEEE--CEEEEEECSSTTEEEEEETTT-----TEEEEEETTTTEEEEEE--ECS
T ss_pred CCCccccCCCeEEEEECCCCcEEeeccCCC--CcceEEECCCCCEEEEEecCC-----CEEEEEECCCCcEEEEe--cCC
Confidence 2211 13578899998876443321111 11122222 3 3788887643 57899999876543321 112
Q ss_pred ccceEEEEE-CCEEEEEcccCCCc----------eeeeEEEEECCCCeEEEc
Q psy14726 575 RSNFAIEVI-DDMIFAIGGFNGVT----------TIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 575 r~~~~~~~~-~~~i~v~GG~~~~~----------~~~~v~~yd~~~~~W~~~ 615 (712)
....+++.. +++.+++++..... .-..+++||+.+.+....
T Consensus 345 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~ 396 (433)
T 3bws_A 345 DKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEF 396 (433)
T ss_dssp SSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEE
T ss_pred CCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEE
Confidence 222233333 45444444432210 012689999988775543
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=96.88 E-value=0.44 Score=48.25 Aligned_cols=201 Identities=7% Similarity=-0.022 Sum_probs=104.1
Q ss_pred CCEEEEEeecCC-CCccceEEEEECCCCcEEEeCCCCCCcceeEEE-EECC-eEEEEcccCCCCCCceeEEeecCCCceE
Q psy14726 396 GYNIYVIGGFDG-NEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTA-VHHD-VIYAMGGYNGQRRQNSVEKYNYTENQWS 472 (712)
Q Consensus 396 ~~~lyv~GG~~~-~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~-~~~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 472 (712)
++.+|+...... ......++.+|+.+++....-+.... .++++ .-++ .+|+.++.+ +.+.+||+.+.+-.
T Consensus 52 g~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~-----~~v~~~d~~~~~~~ 124 (353)
T 3vgz_A 52 ENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLK--PFGATINNTTQTLWFGNTVN-----SAVTAIDAKTGEVK 124 (353)
T ss_dssp TTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSC--CCSEEEETTTTEEEEEETTT-----TEEEEEETTTCCEE
T ss_pred CCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCC--cceEEECCCCCEEEEEecCC-----CEEEEEeCCCCeeE
Confidence 457776653211 11245799999998875433222211 22233 3344 588776532 47999999887643
Q ss_pred EcccCCccc--------cceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEE-E-CCEE
Q psy14726 473 LIAPMNVER--------SDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIA-Y-HECI 540 (712)
Q Consensus 473 ~~~~~p~~r--------~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~-~~~i 540 (712)
..-+.+... .-++++.- ++.+|+.+... ...++.||+.+.+-...-+... ....+++. - ++.+
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~----~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l 199 (353)
T 3vgz_A 125 GRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK----ESVIWVVDGGNIKLKTAIQNTG-KMSTGLALDSEGKRL 199 (353)
T ss_dssp EEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS----SCEEEEEETTTTEEEEEECCCC-TTCCCCEEETTTTEE
T ss_pred EEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC----CceEEEEcCCCCceEEEecCCC-CccceEEECCCCCEE
Confidence 322222111 01223332 45688776322 2469999998876433322111 11122222 2 3567
Q ss_pred EEEcCCCCCCccceEEEEeCCCCcEEEcCCC--CCCccc-eEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCeEEEc
Q psy14726 541 YVIGGFNGMSRMCNGEKYNPVTKTWSQVPDM--YNPRSN-FAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 541 yv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~--p~~r~~-~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
|+... ...+..||+.+.+-...... ..+... .+++.. ++.+|+.+..+ ..+.+||+.+++....
T Consensus 200 ~~~~~------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~~ 268 (353)
T 3vgz_A 200 YTTNA------DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKA-----AEVLVVDTRNGNILAK 268 (353)
T ss_dssp EEECT------TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSS-----SEEEEEETTTCCEEEE
T ss_pred EEEcC------CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCC-----CEEEEEECCCCcEEEE
Confidence 77654 25788999988754332111 111222 233333 45577665322 3689999988876544
Q ss_pred cCCC
Q psy14726 616 TDMN 619 (712)
Q Consensus 616 ~~~p 619 (712)
-..+
T Consensus 269 ~~~~ 272 (353)
T 3vgz_A 269 VAAP 272 (353)
T ss_dssp EECS
T ss_pred EEcC
Confidence 3333
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.38 Score=47.35 Aligned_cols=192 Identities=10% Similarity=0.029 Sum_probs=105.8
Q ss_pred EEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCC
Q psy14726 391 GTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTE 468 (712)
Q Consensus 391 ~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~ 468 (712)
++++. ++.+|+.... ...+.+||+. ++...+........-++++. -+|.+|+.... ...+.+||+.
T Consensus 24 ~i~~d~~g~l~v~~~~-----~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~-----~~~v~~~d~~- 91 (300)
T 2qc5_A 24 GITSSEDGKVWFTQHK-----ANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENG-----ANKIGKLSKK- 91 (300)
T ss_dssp EEEECTTSCEEEEETT-----TTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETT-----TTEEEEECTT-
T ss_pred eeeECCCCCEEEEcCC-----CCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecC-----CCeEEEECCC-
Confidence 44443 6778886532 2468999988 77765432211122334444 35788886431 2468999988
Q ss_pred CceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCC-CcceEEEEE-CCEEEEEc
Q psy14726 469 NQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHR-RSGVSCIAY-HECIYVIG 544 (712)
Q Consensus 469 ~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~-r~~~~~~~~-~~~iyv~G 544 (712)
.++.... ++..........+ ++++|+....+ ..+.+||+. ++..... ++.. ..-.+++.. +++||+..
T Consensus 92 g~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~~-----~~i~~~~~~-g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~ 163 (300)
T 2qc5_A 92 GGFTEYP-LPQPDSGPYGITEGLNGDIWFTQLNG-----DRIGKLTAD-GTIYEYD-LPNKGSYPAFITLGSDNALWFTE 163 (300)
T ss_dssp SCEEEEE-CSSTTCCEEEEEECSTTCEEEEETTT-----TEEEEECTT-SCEEEEE-CSSTTCCEEEEEECTTSSEEEEE
T ss_pred CCeEEec-CCCCCCCCccceECCCCCEEEEccCC-----CeEEEECCC-CCEEEcc-CCCCCCCceeEEECCCCCEEEEe
Confidence 6665442 2211122233333 67899875322 468899987 6655443 2211 122233332 57788875
Q ss_pred CCCCCCccceEEEEeCCCCcEEEcCCCCCCcc-ceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCeEEEc
Q psy14726 545 GFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRS-NFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 545 G~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~-~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
.. ...+++||+ +.++..+.. +.... ..+++.- ++.+|+..... ..+.+||+ ++++...
T Consensus 164 ~~-----~~~i~~~~~-~g~~~~~~~-~~~~~~~~~i~~d~~g~l~v~~~~~-----~~i~~~~~-~g~~~~~ 223 (300)
T 2qc5_A 164 NQ-----NNSIGRITN-TGKLEEYPL-PTNAAAPVGITSGNDGALWFVEIMG-----NKIGRITT-TGEISEY 223 (300)
T ss_dssp TT-----TTEEEEECT-TCCEEEEEC-SSTTCCEEEEEECTTSSEEEEETTT-----TEEEEECT-TCCEEEE
T ss_pred cC-----CCeEEEECC-CCcEEEeeC-CCCCCCcceEEECCCCCEEEEccCC-----CEEEEEcC-CCcEEEE
Confidence 32 257899998 666665432 22212 2233333 57788764321 25889998 5666554
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=96.87 E-value=0.12 Score=51.73 Aligned_cols=186 Identities=6% Similarity=0.102 Sum_probs=99.8
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 474 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 474 (712)
++..++.|+.++ .+..+|..+++....-.-.... -.+++. .+++.++.||.+ ..+..||..+.+-...
T Consensus 34 ~~~~l~s~~~dg-----~i~iw~~~~~~~~~~~~~h~~~-v~~~~~~~~~~~l~s~~~d-----~~i~vwd~~~~~~~~~ 102 (312)
T 4ery_A 34 NGEWLASSSADK-----LIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSNLLVSASDD-----KTLKIWDVSSGKCLKT 102 (312)
T ss_dssp TSSEEEEEETTS-----CEEEEETTTCCEEEEECCCSSC-EEEEEECTTSSEEEEEETT-----SEEEEEETTTCCEEEE
T ss_pred CCCEEEEeeCCC-----eEEEEeCCCcccchhhccCCCc-eEEEEEcCCCCEEEEECCC-----CEEEEEECCCCcEEEE
Confidence 345566666443 4778888877765432211111 122222 356777777754 4688899887653221
Q ss_pred ccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--CCEEEEEcCCCCCC
Q psy14726 475 APMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMS 550 (712)
Q Consensus 475 ~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~ 550 (712)
+........++.+ ++.+++.|+.++ .+..||..+.+-... ++........+.+ ++.+++.|+.+
T Consensus 103 --~~~~~~~v~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d--- 170 (312)
T 4ery_A 103 --LKGHSNYVFCCNFNPQSNLIVSGSFDE-----SVRIWDVKTGKCLKT--LPAHSDPVSAVHFNRDGSLIVSSSYD--- 170 (312)
T ss_dssp --EECCSSCEEEEEECSSSSEEEEEETTS-----CEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETT---
T ss_pred --EcCCCCCEEEEEEcCCCCEEEEEeCCC-----cEEEEECCCCEEEEE--ecCCCCcEEEEEEcCCCCEEEEEeCC---
Confidence 1111111122223 566777787664 588899887653222 2211122222333 56677777754
Q ss_pred ccceEEEEeCCCCcEEEcCCCCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCeE
Q psy14726 551 RMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEW 612 (712)
Q Consensus 551 ~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 612 (712)
..+..||..+.+....-.... ......+.+ ++..++.|+.++ .+.+||..+.+-
T Consensus 171 --~~i~~wd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~~ 226 (312)
T 4ery_A 171 --GLCRIWDTASGQCLKTLIDDD-NPPVSFVKFSPNGKYILAATLDN-----TLKLWDYSKGKC 226 (312)
T ss_dssp --SCEEEEETTTCCEEEEECCSS-CCCEEEEEECTTSSEEEEEETTT-----EEEEEETTTTEE
T ss_pred --CcEEEEECCCCceeeEEeccC-CCceEEEEECCCCCEEEEEcCCC-----eEEEEECCCCcE
Confidence 468899988765433211111 111122222 667777777665 688899887754
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=96.85 E-value=0.081 Score=53.28 Aligned_cols=187 Identities=10% Similarity=0.034 Sum_probs=103.5
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcce-eEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEE
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCY-VSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSL 473 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 473 (712)
++..++.|+.+ ..+..||..+.+......+...... .+++. .+++.++.|+.+ ..+..||..+.+...
T Consensus 108 ~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~v~~~d~~~~~~~~ 177 (337)
T 1gxr_A 108 DGCTLIVGGEA-----STLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD-----GNIAVWDLHNQTLVR 177 (337)
T ss_dssp TSSEEEEEESS-----SEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEE
T ss_pred CCCEEEEEcCC-----CcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCceee
Confidence 56666777643 4689999998875443333222222 22232 256777777654 458899988776433
Q ss_pred cccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEE-ECCEEEEEcCCCCCC
Q psy14726 474 IAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIA-YHECIYVIGGFNGMS 550 (712)
Q Consensus 474 ~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~ 550 (712)
.- ...........+ ++..++.|+.+ ..+..||..+.+-...-..+.+ -.+++. -++..+++|+.+
T Consensus 178 ~~--~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~~~~~~~--v~~~~~s~~~~~l~~~~~~--- 245 (337)
T 1gxr_A 178 QF--QGHTDGASCIDISNDGTKLWTGGLD-----NTVRSWDLREGRQLQQHDFTSQ--IFSLGYCPTGEWLAVGMES--- 245 (337)
T ss_dssp EE--CCCSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEEEECSSC--EEEEEECTTSSEEEEEETT---
T ss_pred ee--ecccCceEEEEECCCCCEEEEEecC-----CcEEEEECCCCceEeeecCCCc--eEEEEECCCCCEEEEEcCC---
Confidence 21 111122223333 66677777655 3688999887764333222221 222222 256667777643
Q ss_pred ccceEEEEeCCCCcEEEcCCCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCeEE
Q psy14726 551 RMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEWY 613 (712)
Q Consensus 551 ~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 613 (712)
..+..||..+..-..+..... .-.+++.. +++.++.|+.++ .+.+||..+++-.
T Consensus 246 --~~i~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~dg-----~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 246 --SNVEVLHVNKPDKYQLHLHES--CVLSLKFAYCGKWFVSTGKDN-----LLNAWRTPYGASI 300 (337)
T ss_dssp --SCEEEEETTSSCEEEECCCSS--CEEEEEECTTSSEEEEEETTS-----EEEEEETTTCCEE
T ss_pred --CcEEEEECCCCCeEEEcCCcc--ceeEEEECCCCCEEEEecCCC-----cEEEEECCCCeEE
Confidence 468899988765444322211 11222222 577778887654 6888998877654
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=96.83 E-value=0.18 Score=50.49 Aligned_cols=225 Identities=17% Similarity=0.173 Sum_probs=113.7
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEE
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 426 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 426 (712)
+..++.|+.+ ..+..+|..++.-... .... ...-.++... ++..++.|+.+ ..+..||..+++-..
T Consensus 25 ~~~l~s~~~d-----g~v~lWd~~~~~~~~~--~~~~-~~~v~~~~~~~~~~~l~s~s~d-----~~i~vwd~~~~~~~~ 91 (304)
T 2ynn_A 25 EPWVLTTLYS-----GRVELWNYETQVEVRS--IQVT-ETPVRAGKFIARKNWIIVGSDD-----FRIRVFNYNTGEKVV 91 (304)
T ss_dssp SSEEEEEETT-----SEEEEEETTTTEEEEE--EECC-SSCEEEEEEEGGGTEEEEEETT-----SEEEEEETTTCCEEE
T ss_pred CCEEEEEcCC-----CcEEEEECCCCceeEE--eecc-CCcEEEEEEeCCCCEEEEECCC-----CEEEEEECCCCcEEE
Confidence 4456666643 3678888887764331 1111 1111223333 56667777753 468889988776322
Q ss_pred -eCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE---CCEEEEEcccCC
Q psy14726 427 -IAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL---QGKIYITGGFNG 501 (712)
Q Consensus 427 -~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~ 501 (712)
+.. . ...-.+++. .++.+++.|+.+ ..+..||..++. .....+..-...-.++.+ ++.+++.||.++
T Consensus 92 ~~~~-h-~~~v~~~~~~~~~~~l~sgs~D-----~~v~lWd~~~~~-~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~ 163 (304)
T 2ynn_A 92 DFEA-H-PDYIRSIAVHPTKPYVLSGSDD-----LTVKLWNWENNW-ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDR 163 (304)
T ss_dssp EEEC-C-SSCEEEEEECSSSSEEEEEETT-----SCEEEEEGGGTT-EEEEEECCCCSCEEEEEECTTCTTEEEEEETTS
T ss_pred EEeC-C-CCcEEEEEEcCCCCEEEEECCC-----CeEEEEECCCCc-chhhhhcccCCcEEEEEECCCCCCEEEEEeCCC
Confidence 211 1 111122333 356677777754 457888876542 111111111111122333 456778887664
Q ss_pred CCccCceEEeeCCCCe--eEEeCCCCCCCcceEEEEE----CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCc
Q psy14726 502 HNCLNSCEVYDPECNQ--WTLIEPMRHRRSGVSCIAY----HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPR 575 (712)
Q Consensus 502 ~~~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r 575 (712)
.+..||..+.. ..... ...+ ....+.+ ++.+++.|+.+ ..+..||..+.+-... +....
T Consensus 164 -----~v~iwd~~~~~~~~~~~~--~~~~-~v~~~~~~~~~~~~~l~s~s~D-----~~i~iWd~~~~~~~~~--~~~h~ 228 (304)
T 2ynn_A 164 -----TVKVWSLGQSTPNFTLTT--GQER-GVNYVDYYPLPDKPYMITASDD-----LTIKIWDYQTKSCVAT--LEGHM 228 (304)
T ss_dssp -----EEEEEETTCSSCSEEEEC--CCTT-CEEEEEECCSTTCCEEEEEETT-----SEEEEEETTTTEEEEE--EECCS
T ss_pred -----eEEEEECCCCCccceecc--CCcC-cEEEEEEEEcCCCCEEEEEcCC-----CeEEEEeCCCCcccee--eCCCC
Confidence 57778875543 11111 1111 1122222 45566777654 5788899887643221 11111
Q ss_pred cceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCeEE
Q psy14726 576 SNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEWY 613 (712)
Q Consensus 576 ~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 613 (712)
.....+.+ ++.+++.|+.++ .+.+||..+.+-.
T Consensus 229 ~~v~~~~~~p~~~~l~s~s~Dg-----~i~iWd~~~~~~~ 263 (304)
T 2ynn_A 229 SNVSFAVFHPTLPIIISGSEDG-----TLKIWNSSTYKVE 263 (304)
T ss_dssp SCEEEEEECSSSSEEEEEETTS-----CEEEEETTTCCEE
T ss_pred CCEEEEEECCCCCEEEEEcCCC-----eEEEEECCCCcee
Confidence 12222333 566788888765 5788898876543
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=96.83 E-value=0.14 Score=53.58 Aligned_cols=194 Identities=9% Similarity=0.061 Sum_probs=99.2
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEE-----eCCCCC-CcceeEEEEE-CC-eEEEEcccCCCCCCceeEEeecC
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE-----IAPMNF-KRCYVSTAVH-HD-VIYAMGGYNGQRRQNSVEKYNYT 467 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~-----~~~~~~-~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~ 467 (712)
++.+++.|+.+ ..+..||..++.... +..+.. ...-.+++.. ++ .+++.|+.+ ..+.+||..
T Consensus 93 ~~~~l~s~s~d-----g~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d-----g~i~iwd~~ 162 (402)
T 2aq5_A 93 NDNVIASGSED-----CTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCD-----NVILVWDVG 162 (402)
T ss_dssp CTTEEEEEETT-----SEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETT-----SCEEEEETT
T ss_pred CCCEEEEEeCC-----CeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCC-----CEEEEEECC
Confidence 56777888754 358889988764321 111111 1111223332 33 577777754 458899998
Q ss_pred CCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeC--CCCCCCcceEEEEECCEEEEE
Q psy14726 468 ENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIE--PMRHRRSGVSCIAYHECIYVI 543 (712)
Q Consensus 468 ~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~~~~iyv~ 543 (712)
+.+....-..........++.+ ++..++.|+.+ ..+.+||+.+.+-...- .....+....+..-++.+++.
T Consensus 163 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 237 (402)
T 2aq5_A 163 TGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD-----KRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTT 237 (402)
T ss_dssp TTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT-----SEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEE
T ss_pred CCCccEEEecCCCCCceEEEEECCCCCEEEEEecC-----CcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEE
Confidence 8765432210111112222333 67777777755 46889999887643322 111122222333346787777
Q ss_pred cCCCCCCccceEEEEeCCCCcE-EEcCCCCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 544 GGFNGMSRMCNGEKYNPVTKTW-SQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 544 GG~~~~~~~~~v~~yd~~~~~W-~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
|... ..-..+..||..+..- .............+++.. +..+++.|+.++ .+.+||..+++
T Consensus 238 g~~~--~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg-----~i~i~d~~~~~ 301 (402)
T 2aq5_A 238 GFSR--MSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDS-----SIRYFEITSEA 301 (402)
T ss_dssp EECT--TCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCS-----CEEEEEECSST
T ss_pred eccC--CCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCC-----eEEEEEecCCC
Confidence 7211 0135788999876431 001111111122233333 345666665554 57788877765
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=96.83 E-value=0.24 Score=54.78 Aligned_cols=120 Identities=13% Similarity=0.162 Sum_probs=73.2
Q ss_pred EEEECCEEEEEeecCCCCccceEEEEEC-CCCc--EEEeCCCCCC--------cceeEEEEECCeEEEEcccCCCCCCce
Q psy14726 392 TAVIGYNIYVIGGFDGNEYYNSCRCFNA-VTKV--WKEIAPMNFK--------RCYVSTAVHHDVIYAMGGYNGQRRQNS 460 (712)
Q Consensus 392 ~~~~~~~lyv~GG~~~~~~~~~v~~yd~-~~~~--W~~~~~~~~~--------r~~~~~~~~~~~iyv~GG~~~~~~~~~ 460 (712)
-++.++.||+.+.. ...++++|. .+++ |+.-...+.. ....+.++.+++||+..+ ...
T Consensus 58 P~v~~g~vyv~~~~-----~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------dg~ 126 (571)
T 2ad6_A 58 PLVIGDMMYVHSAF-----PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA------NGH 126 (571)
T ss_dssp CEEETTEEEEECST-----TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT------TSE
T ss_pred cEEECCEEEEEeCC-----CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC------CCE
Confidence 35569999998652 246999999 7775 8764333211 112345677999998743 246
Q ss_pred eEEeecCCC--ceEEcccC-Ccc-ccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCe--eEEeC
Q psy14726 461 VEKYNYTEN--QWSLIAPM-NVE-RSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQ--WTLIE 522 (712)
Q Consensus 461 v~~yd~~~~--~W~~~~~~-p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~ 522 (712)
++.+|..+. .|+.-..- +.. ....+.++.++++|+..+.........+..||..+++ |+.-.
T Consensus 127 l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 194 (571)
T 2ad6_A 127 LLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFA 194 (571)
T ss_dssp EEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred EEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEcc
Confidence 999999877 48753221 111 1122334568999876542111123579999998775 87654
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=96.83 E-value=0.16 Score=53.08 Aligned_cols=222 Identities=8% Similarity=0.059 Sum_probs=116.0
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV 441 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~ 441 (712)
..+..+|..+++........ ....-.+++.. ++..+++|+.+ ..+..||..+++....-. ..........
T Consensus 113 ~~v~lw~~~~~~~~~~~~~~--~~~~v~~v~~s~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~--~~~~~v~~~~ 183 (401)
T 4aez_A 113 RNVYVWNADSGSVSALAETD--ESTYVASVKWSHDGSFLSVGLGN-----GLVDIYDVESQTKLRTMA--GHQARVGCLS 183 (401)
T ss_dssp TEEEEEETTTCCEEEEEECC--TTCCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCCEEEEEC--CCSSCEEEEE
T ss_pred CeEEEeeCCCCcEeEeeecC--CCCCEEEEEECCCCCEEEEECCC-----CeEEEEECcCCeEEEEec--CCCCceEEEE
Confidence 36889999888776532221 12222233333 66677777754 358899988876543222 1222233344
Q ss_pred ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeE
Q psy14726 442 HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWT 519 (712)
Q Consensus 442 ~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 519 (712)
.++.+++.|+.+ ..+..||..+..-. +..+...........+ ++..++.||.++ .+..||..+.+-.
T Consensus 184 ~~~~~l~~~~~d-----g~i~i~d~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~-----~v~iwd~~~~~~~ 252 (401)
T 4aez_A 184 WNRHVLSSGSRS-----GAIHHHDVRIANHQ-IGTLQGHSSEVCGLAWRSDGLQLASGGNDN-----VVQIWDARSSIPK 252 (401)
T ss_dssp EETTEEEEEETT-----SEEEEEETTSSSCE-EEEEECCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTCSSEE
T ss_pred ECCCEEEEEcCC-----CCEEEEecccCcce-eeEEcCCCCCeeEEEEcCCCCEEEEEeCCC-----eEEEccCCCCCcc
Confidence 467777777754 46888888743311 1111111112222333 677788887653 5888998875432
Q ss_pred Ee-CCCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE-CCE-EEEEcc-c
Q psy14726 520 LI-EPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DDM-IFAIGG-F 593 (712)
Q Consensus 520 ~~-~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-i~v~GG-~ 593 (712)
.. ..... .-.+++.. ++.+++.||.. .-..+..||..+.+-...-... ..-.+++.. ++. +++.+| .
T Consensus 253 ~~~~~~~~--~v~~~~~~p~~~~ll~~~~gs---~d~~i~i~d~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~~~~g~~ 325 (401)
T 4aez_A 253 FTKTNHNA--AVKAVAWCPWQSNLLATGGGT---MDKQIHFWNAATGARVNTVDAG--SQVTSLIWSPHSKEIMSTHGFP 325 (401)
T ss_dssp EEECCCSS--CCCEEEECTTSTTEEEEECCT---TTCEEEEEETTTCCEEEEEECS--SCEEEEEECSSSSEEEEEECTT
T ss_pred EEecCCcc--eEEEEEECCCCCCEEEEecCC---CCCEEEEEECCCCCEEEEEeCC--CcEEEEEECCCCCeEEEEeecC
Confidence 21 11111 11223333 34677776411 1256889998876543332211 111222222 444 444434 4
Q ss_pred CCCceeeeEEEEECCCCeEEEcc
Q psy14726 594 NGVTTIYHVECYDEKTDEWYEAT 616 (712)
Q Consensus 594 ~~~~~~~~v~~yd~~~~~W~~~~ 616 (712)
++ .+.+||..+.......
T Consensus 326 dg-----~i~v~~~~~~~~~~~~ 343 (401)
T 4aez_A 326 DN-----NLSIWSYSSSGLTKQV 343 (401)
T ss_dssp TC-----EEEEEEEETTEEEEEE
T ss_pred CC-----cEEEEecCCccceeEE
Confidence 33 5788888887766553
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=96.82 E-value=0.35 Score=47.24 Aligned_cols=230 Identities=8% Similarity=-0.061 Sum_probs=123.5
Q ss_pred CceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCC-CcEEEeCCCCC-CcceeE
Q psy14726 362 TDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVT-KVWKEIAPMNF-KRCYVS 438 (712)
Q Consensus 362 ~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~-~~W~~~~~~~~-~r~~~~ 438 (712)
...+..+|..+++...+... ...-.+++.. ++..+++++ ...++.+|..+ ++...+..... ......
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~----~~~v~~~~~spdg~~l~~~~------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 90 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQT----PELFEAPNWSPDGKYLLLNS------EGLLYRLSLAGDPSPEKVDTGFATICNNDH 90 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEE----SSCCEEEEECTTSSEEEEEE------TTEEEEEESSSCCSCEECCCTTCCCBCSCC
T ss_pred ceeEEEEeCCCCceeeeccC----CcceEeeEECCCCCEEEEEc------CCeEEEEeCCCCCCceEeccccccccccce
Confidence 45688899888877654221 1122233333 566666665 24799999999 87776654332 122222
Q ss_pred EEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE-CC-EEEEEcccCCCCccCceEEeeCCCC
Q psy14726 439 TAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL-QG-KIYITGGFNGHNCLNSCEVYDPECN 516 (712)
Q Consensus 439 ~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~~ 516 (712)
...-+++.+++++.... ....++.+|..+.....+..... ....+.. ++ .|++.++.++ ...++.+|..+.
T Consensus 91 ~~spdg~~l~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~spdg~~l~~~~~~~~---~~~l~~~~~~~~ 163 (297)
T 2ojh_A 91 GISPDGALYAISDKVEF-GKSAIYLLPSTGGTPRLMTKNLP---SYWHGWSPDGKSFTYCGIRDQ---VFDIYSMDIDSG 163 (297)
T ss_dssp EECTTSSEEEEEECTTT-SSCEEEEEETTCCCCEECCSSSS---EEEEEECTTSSEEEEEEEETT---EEEEEEEETTTC
T ss_pred EECCCCCEEEEEEeCCC-CcceEEEEECCCCceEEeecCCC---ccceEECCCCCEEEEEECCCC---ceEEEEEECCCC
Confidence 23346666666653221 34678999988877555543321 1122222 44 4554554443 136777778877
Q ss_pred eeEEeCCCCCCCcceEEEEECCE-EEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE--CCEEEEEccc
Q psy14726 517 QWTLIEPMRHRRSGVSCIAYHEC-IYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGF 593 (712)
Q Consensus 517 ~W~~~~~~p~~r~~~~~~~~~~~-iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~ 593 (712)
....+...+... ......-+++ |++.+..++ ...++.++........+.... .......+ +++.+++++.
T Consensus 164 ~~~~~~~~~~~~-~~~~~s~dg~~l~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~s~dg~~l~~~~~ 236 (297)
T 2ojh_A 164 VETRLTHGEGRN-DGPDYSPDGRWIYFNSSRTG---QMQIWRVRVDGSSVERITDSA---YGDWFPHPSPSGDKVVFVSY 236 (297)
T ss_dssp CEEECCCSSSCE-EEEEECTTSSEEEEEECTTS---SCEEEEEETTSSCEEECCCCS---EEEEEEEECTTSSEEEEEEE
T ss_pred cceEcccCCCcc-ccceECCCCCEEEEEecCCC---CccEEEECCCCCCcEEEecCC---cccCCeEECCCCCEEEEEEc
Confidence 776665432211 1111222454 555443332 457888888777777765432 11222222 5555555544
Q ss_pred CCCc------eeeeEEEEECCCCeEEEc
Q psy14726 594 NGVT------TIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 594 ~~~~------~~~~v~~yd~~~~~W~~~ 615 (712)
++.. ....+++||+.+++...+
T Consensus 237 ~~~~~~~~~~~~~~l~~~d~~~~~~~~~ 264 (297)
T 2ojh_A 237 DADVFDHPRDLDVRVQLMDMDGGNVETL 264 (297)
T ss_dssp ETTCCSCCSSEEEEEEEEETTSCSCEEE
T ss_pred CCCCCcccccCceEEEEEecCCCCceee
Confidence 3221 235699999988776554
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.062 Score=55.23 Aligned_cols=182 Identities=10% Similarity=0.082 Sum_probs=93.6
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcce-eEEEE-ECC-eEEEEcccCCCCCCceeEEeecCCCceE
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCY-VSTAV-HHD-VIYAMGGYNGQRRQNSVEKYNYTENQWS 472 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~-~~~~~-~~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 472 (712)
++..++.|+.++ .+..+|..+++-... +...... .+++. .++ .+++.|+.+ ..+..||..+.+-.
T Consensus 138 dg~~l~sgs~d~-----~i~iwd~~~~~~~~~--~~~h~~~V~~~~~~~~~~~~l~s~s~D-----~~v~iwd~~~~~~~ 205 (344)
T 4gqb_B 138 SGTQAVSGSKDI-----CIKVWDLAQQVVLSS--YRAHAAQVTCVAASPHKDSVFLSCSED-----NRILLWDTRCPKPA 205 (344)
T ss_dssp TSSEEEEEETTS-----CEEEEETTTTEEEEE--ECCCSSCEEEEEECSSCTTEEEEEETT-----SCEEEEETTSSSCE
T ss_pred CCCEEEEEeCCC-----eEEEEECCCCcEEEE--EcCcCCceEEEEecCCCCCceeeeccc-----ccccccccccccee
Confidence 677777887543 588999988764322 2111111 12222 233 577777754 45888998876643
Q ss_pred EcccCCccccceeEEEE---CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--CC-EEEEEcCC
Q psy14726 473 LIAPMNVERSDASATTL---QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HE-CIYVIGGF 546 (712)
Q Consensus 473 ~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~ 546 (712)
..-..........++.+ ++++++.|+.++ .+..||..+.+- +..+.........+.+ ++ ++++.|+.
T Consensus 206 ~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg-----~v~~wd~~~~~~--~~~~~~h~~~v~~v~fsp~g~~~lasgs~ 278 (344)
T 4gqb_B 206 SQIGCSAPGYLPTSLAWHPQQSEVFVFGDENG-----TVSLVDTKSTSC--VLSSAVHSQCVTGLVFSPHSVPFLASLSE 278 (344)
T ss_dssp EECC----CCCEEEEEECSSCTTEEEEEETTS-----EEEEEESCC--C--CEEEECCSSCEEEEEECSSSSCCEEEEET
T ss_pred eeeecceeeccceeeeecCCCCcceEEeccCC-----cEEEEECCCCcE--EEEEcCCCCCEEEEEEccCCCeEEEEEeC
Confidence 22111111111222232 567888887653 578888876542 1111111122222333 33 56666765
Q ss_pred CCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE---CCEEEEEcccCCCceeeeEEEEECCC
Q psy14726 547 NGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI---DDMIFAIGGFNGVTTIYHVECYDEKT 609 (712)
Q Consensus 547 ~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~v~~yd~~~ 609 (712)
+ ..|..||..+.+-..+... ...-..+.+ +..+++.||.++ .|.+|+..+
T Consensus 279 D-----~~i~vwd~~~~~~~~~~~H---~~~V~~v~~sp~~~~llas~s~D~-----~v~~w~v~~ 331 (344)
T 4gqb_B 279 D-----CSLAVLDSSLSELFRSQAH---RDFVRDATWSPLNHSLLTTVGWDH-----QVVHHVVPT 331 (344)
T ss_dssp T-----SCEEEECTTCCEEEEECCC---SSCEEEEEECSSSTTEEEEEETTS-----CEEEEECCC
T ss_pred C-----CeEEEEECCCCcEEEEcCC---CCCEEEEEEeCCCCeEEEEEcCCC-----eEEEEECCC
Confidence 4 4678899887754433211 111222333 446788888776 455555544
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.044 Score=56.63 Aligned_cols=184 Identities=11% Similarity=0.056 Sum_probs=96.9
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEE-CC-eEEEEcccCCCCCCceeEEeecCCCceEE
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH-HD-VIYAMGGYNGQRRQNSVEKYNYTENQWSL 473 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 473 (712)
++..++.|+.++ .+..||..+++-...-..... .-.+++.. ++ .+++.||.+ ..+..||..+.+-..
T Consensus 150 dg~~l~sgs~dg-----~v~iwd~~~~~~~~~~~~h~~-~v~~v~~s~~~~~~~~s~~~d-----g~v~~wd~~~~~~~~ 218 (357)
T 4g56_B 150 DGTQAVSGGKDF-----SVKVWDLSQKAVLKSYNAHSS-EVNCVAACPGKDTIFLSCGED-----GRILLWDTRKPKPAT 218 (357)
T ss_dssp SSSEEEEEETTS-----CEEEEETTTTEEEEEECCCSS-CEEEEEECTTCSSCEEEEETT-----SCEEECCTTSSSCBC
T ss_pred CCCEEEEEeCCC-----eEEEEECCCCcEEEEEcCCCC-CEEEEEEccCCCceeeeeccC-----CceEEEECCCCceee
Confidence 667777887543 588899988765432221111 11223332 33 567777754 358888887765332
Q ss_pred cccCCccccceeEEEE---CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--CC-EEEEEcCCC
Q psy14726 474 IAPMNVERSDASATTL---QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HE-CIYVIGGFN 547 (712)
Q Consensus 474 ~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~ 547 (712)
............++.+ ++.+++.|+.++ .+..||..+.+-... +.........+.+ ++ ++++.|+.+
T Consensus 219 ~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~-----~i~~wd~~~~~~~~~--~~~~~~~v~~l~~sp~~~~~lasgs~D 291 (357)
T 4g56_B 219 RIDFCASDTIPTSVTWHPEKDDTFACGDETG-----NVSLVNIKNPDSAQT--SAVHSQNITGLAYSYHSSPFLASISED 291 (357)
T ss_dssp BCCCTTCCSCEEEEEECTTSTTEEEEEESSS-----CEEEEESSCGGGCEE--ECCCSSCEEEEEECSSSSCCEEEEETT
T ss_pred eeeeccccccccchhhhhcccceEEEeeccc-----ceeEEECCCCcEeEE--EeccceeEEEEEEcCCCCCEEEEEeCC
Confidence 2222222222233333 456788887653 578888876542111 1111112222332 33 566667654
Q ss_pred CCCccceEEEEeCCCCcEEEcCCCCCCccceEEEE--ECCEEEEEcccCCCceeeeEEEEECCC
Q psy14726 548 GMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEV--IDDMIFAIGGFNGVTTIYHVECYDEKT 609 (712)
Q Consensus 548 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~ 609 (712)
..|.+||..+.+-...-.. ...-.+++. .++.+++.||.++ .|.+||..+
T Consensus 292 -----~~i~iwd~~~~~~~~~~~H--~~~V~~vafsP~d~~~l~s~s~Dg-----~v~iW~~~~ 343 (357)
T 4g56_B 292 -----CTVAVLDADFSEVFRDLSH--RDFVTGVAWSPLDHSKFTTVGWDH-----KVLHHHLPS 343 (357)
T ss_dssp -----SCEEEECTTSCEEEEECCC--SSCEEEEEECSSSTTEEEEEETTS-----CEEEEECC-
T ss_pred -----CEEEEEECCCCcEeEECCC--CCCEEEEEEeCCCCCEEEEEcCCC-----eEEEEECCC
Confidence 4688899887754433211 111122333 2677888888776 466777543
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=96.77 E-value=0.12 Score=59.87 Aligned_cols=228 Identities=15% Similarity=0.114 Sum_probs=118.1
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEE
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 426 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 426 (712)
+..+++|+. ...+..||..++.....-. .. ...-.+++.. ++..+++||.+ ..+..||..+++...
T Consensus 25 ~~~la~~~~-----~g~v~iwd~~~~~~~~~~~--~~-~~~v~~~~~s~~~~~l~~~~~d-----g~i~vw~~~~~~~~~ 91 (814)
T 3mkq_A 25 EPWVLTTLY-----SGRVEIWNYETQVEVRSIQ--VT-ETPVRAGKFIARKNWIIVGSDD-----FRIRVFNYNTGEKVV 91 (814)
T ss_dssp SSEEEEEET-----TSEEEEEETTTTEEEEEEE--CC-SSCEEEEEEEGGGTEEEEEETT-----SEEEEEETTTCCEEE
T ss_pred CCEEEEEeC-----CCEEEEEECCCCceEEEEe--cC-CCcEEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCcEEE
Confidence 445666653 2468889988876554211 11 1112233333 56677777753 468999998887643
Q ss_pred eCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE---CCEEEEEcccCCC
Q psy14726 427 IAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL---QGKIYITGGFNGH 502 (712)
Q Consensus 427 ~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~ 502 (712)
.-...... -.+++. -++..++.|+.+ ..+.+||..++ |.....+........++.+ ++..++.|+.++
T Consensus 92 ~~~~~~~~-v~~~~~s~~~~~l~~~~~d-----g~i~vw~~~~~-~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg- 163 (814)
T 3mkq_A 92 DFEAHPDY-IRSIAVHPTKPYVLSGSDD-----LTVKLWNWENN-WALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDR- 163 (814)
T ss_dssp EEECCSSC-EEEEEECSSSSEEEEEETT-----SEEEEEEGGGT-SEEEEEEECCSSCEEEEEEETTEEEEEEEEETTS-
T ss_pred EEecCCCC-EEEEEEeCCCCEEEEEcCC-----CEEEEEECCCC-ceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCC-
Confidence 32211111 122222 356666666643 46888888765 2222111111111222222 466777777653
Q ss_pred CccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE---CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceE
Q psy14726 503 NCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY---HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFA 579 (712)
Q Consensus 503 ~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~ 579 (712)
.+..||..+..-...-..........+... ++..++.|+.+ ..+..||..+.+-... +........
T Consensus 164 ----~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~--~~~~~~~v~ 232 (814)
T 3mkq_A 164 ----TVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDD-----LTIKIWDYQTKSCVAT--LEGHMSNVS 232 (814)
T ss_dssp ----EEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTT-----SEEEEEETTTTEEEEE--EECCSSCEE
T ss_pred ----eEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCC-----CEEEEEECCCCcEEEE--EcCCCCCEE
Confidence 588888765542221111111122222222 56677777754 4788999877653222 111111122
Q ss_pred EEEE--CCEEEEEcccCCCceeeeEEEEECCCCeE
Q psy14726 580 IEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEW 612 (712)
Q Consensus 580 ~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 612 (712)
.+.+ ++.+++.||.++ .+.+||+.+.+-
T Consensus 233 ~~~~~~~~~~l~~~~~dg-----~v~vwd~~~~~~ 262 (814)
T 3mkq_A 233 FAVFHPTLPIIISGSEDG-----TLKIWNSSTYKV 262 (814)
T ss_dssp EEEECSSSSEEEEEETTS-----CEEEEETTTCSE
T ss_pred EEEEcCCCCEEEEEeCCC-----eEEEEECCCCcE
Confidence 2222 566788888665 578888877543
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=96.75 E-value=0.072 Score=54.68 Aligned_cols=192 Identities=9% Similarity=0.065 Sum_probs=101.7
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcce-eEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEE
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCY-VSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSL 473 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 473 (712)
++.++++|+.+ ..+..||..+++|..+..+...... .+++. -+++.++.|+.+ ..+..||..+.++..
T Consensus 19 ~~~~l~~~~~d-----~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~ 88 (372)
T 1k8k_C 19 DRTQIAICPNN-----HEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTD-----RNAYVWTLKGRTWKP 88 (372)
T ss_dssp TSSEEEEECSS-----SEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETT-----SCEEEEEEETTEEEE
T ss_pred CCCEEEEEeCC-----CEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCC-----CeEEEEECCCCeeee
Confidence 55666677643 4689999999887665544322222 23333 356777777743 468899998888765
Q ss_pred cccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCe-eEEeCCC--CCCCcceEEEEE-CCEEEEEcCCC
Q psy14726 474 IAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQ-WTLIEPM--RHRRSGVSCIAY-HECIYVIGGFN 547 (712)
Q Consensus 474 ~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~~~--p~~r~~~~~~~~-~~~iyv~GG~~ 547 (712)
...+.........+.+ +++.++.|+.++ .+..||..+.. |...... +....-.++... ++..++.|+.+
T Consensus 89 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 163 (372)
T 1k8k_C 89 TLVILRINRAARCVRWAPNEKKFAVGSGSR-----VISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD 163 (372)
T ss_dssp EEECCCCSSCEEEEEECTTSSEEEEEETTS-----SEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred eEEeecCCCceeEEEECCCCCEEEEEeCCC-----EEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCC
Confidence 5433222222333333 567777777553 45666655543 3333222 111122222222 56677777654
Q ss_pred CCCccceEEEEeCCCCc---------E-------EEcCCCCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCC
Q psy14726 548 GMSRMCNGEKYNPVTKT---------W-------SQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKT 609 (712)
Q Consensus 548 ~~~~~~~v~~yd~~~~~---------W-------~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~ 609 (712)
..+..||..... | ..+..+.........+.+ ++..++.|+.++ .+.+||..+
T Consensus 164 -----g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~ 233 (372)
T 1k8k_C 164 -----FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDS-----TVCLADADK 233 (372)
T ss_dssp -----SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTT-----EEEEEEGGG
T ss_pred -----CCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCC-----EEEEEECCC
Confidence 467788854211 1 111111111111222333 666777777654 578888876
Q ss_pred CeE
Q psy14726 610 DEW 612 (712)
Q Consensus 610 ~~W 612 (712)
.+-
T Consensus 234 ~~~ 236 (372)
T 1k8k_C 234 KMA 236 (372)
T ss_dssp TTE
T ss_pred Cce
Confidence 543
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=96.72 E-value=0.49 Score=50.28 Aligned_cols=184 Identities=14% Similarity=0.144 Sum_probs=101.8
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 474 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 474 (712)
++..++.|+.+ ..+..||..+.+-...-...... -.+++. .++..++.|+.+ ..+..||..+.+-.
T Consensus 279 ~~~~l~~~~~d-----~~i~vwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~sg~~d-----g~i~vwd~~~~~~~-- 345 (464)
T 3v7d_B 279 HGNIVVSGSYD-----NTLIVWDVAQMKCLYILSGHTDR-IYSTIYDHERKRCISASMD-----TTIRIWDLENGELM-- 345 (464)
T ss_dssp ETTEEEEEETT-----SCEEEEETTTTEEEEEECCCSSC-EEEEEEETTTTEEEEEETT-----SCEEEEETTTTEEE--
T ss_pred CCCEEEEEeCC-----CeEEEEECCCCcEEEEecCCCCC-EEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCcEE--
Confidence 45566677654 35889999877643322211122 222332 356677777754 45889998876532
Q ss_pred ccCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccce
Q psy14726 475 APMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCN 554 (712)
Q Consensus 475 ~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~ 554 (712)
..+........+..+++..++.|+.++ .+..||..+..-..... ........+...++.+++.|+ + ..
T Consensus 346 ~~~~~h~~~v~~~~~~~~~l~s~s~dg-----~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-d-----g~ 413 (464)
T 3v7d_B 346 YTLQGHTALVGLLRLSDKFLVSAAADG-----SIRGWDANDYSRKFSYH-HTNLSAITTFYVSDNILVSGS-E-----NQ 413 (464)
T ss_dssp EEECCCSSCEEEEEECSSEEEEEETTS-----EEEEEETTTCCEEEEEE-CTTCCCEEEEEECSSEEEEEE-T-----TE
T ss_pred EEEeCCCCcEEEEEEcCCEEEEEeCCC-----cEEEEECCCCceeeeec-CCCCccEEEEEeCCCEEEEec-C-----Ce
Confidence 222222223344555677777777664 58889988765322221 112233344555777777776 2 47
Q ss_pred EEEEeCCCCcEEEcCCCCCCccceEEEEECCEEEEEcccCCCceeeeEEEEEC
Q psy14726 555 GEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDE 607 (712)
Q Consensus 555 v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~ 607 (712)
+..||..+++-......+....-.+++..++.+++.|+.++.. -++++|.
T Consensus 414 i~iwd~~~g~~~~~~~~~~~~~v~~v~~~~~~l~~~~~~~g~~---~i~~ldf 463 (464)
T 3v7d_B 414 FNIYNLRSGKLVHANILKDADQIWSVNFKGKTLVAAVEKDGQS---FLEILDF 463 (464)
T ss_dssp EEEEETTTCCEEESCTTTTCSEEEEEEEETTEEEEEEEETTEE---EEEEEEC
T ss_pred EEEEECCCCcEEehhhccCCCcEEEEEecCCEEEEEEEeCCeE---EEEEeec
Confidence 8999999887654322222222233344466666666655422 3566653
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=96.69 E-value=0.19 Score=50.09 Aligned_cols=196 Identities=13% Similarity=0.246 Sum_probs=96.3
Q ss_pred CEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEE--C--CeEEEEcccCCCCCCceeEEeecCCCc-e
Q psy14726 397 YNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH--H--DVIYAMGGYNGQRRQNSVEKYNYTENQ-W 471 (712)
Q Consensus 397 ~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~v~~yd~~~~~-W 471 (712)
+.+++.|+.+ ..+..+|..+++|..+..+.........+.+ + +.+++.|+.+ ..+..||..+.. +
T Consensus 67 g~~l~s~s~D-----~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d-----~~v~~wd~~~~~~~ 136 (297)
T 2pm7_B 67 GTILASCSYD-----GKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSD-----GKVSVVEFKENGTT 136 (297)
T ss_dssp CSEEEEEETT-----TEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEEBCSSSCB
T ss_pred CCEEEEEcCC-----CEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECC-----CcEEEEEecCCCce
Confidence 5677777754 4688899988877554333221222222222 2 5677777654 457777776542 2
Q ss_pred EEcccCCccccceeEEEE---------------CCEEEEEcccCCCCccCceEEeeCCC--CeeEEeCCCCCCCcceEEE
Q psy14726 472 SLIAPMNVERSDASATTL---------------QGKIYITGGFNGHNCLNSCEVYDPEC--NQWTLIEPMRHRRSGVSCI 534 (712)
Q Consensus 472 ~~~~~~p~~r~~~~~~~~---------------~~~iyv~GG~~~~~~~~~v~~yd~~~--~~W~~~~~~p~~r~~~~~~ 534 (712)
.... +.........+.+ ++++++.||.++ .+..||..+ ..|.....+.........+
T Consensus 137 ~~~~-~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~-----~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v 210 (297)
T 2pm7_B 137 SPII-IDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN-----LVKIWKYNSDAQTYVLESTLEGHSDWVRDV 210 (297)
T ss_dssp CCEE-EECCSSCEEEEEECCCC------------CCEEEEEETTS-----CEEEEEEETTTTEEEEEEEECCCSSCEEEE
T ss_pred eeee-eecccCccceEeecCCcccccccCCCCCCcceEEEEcCCC-----cEEEEEEcCCCceEEEEEEecCCCCceEEE
Confidence 1110 0000000111111 245777887664 456666544 3465554443222222233
Q ss_pred EE--C---CEEEEEcCCCCCCccceEEEEeCCC--CcEEE--cCCCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEE
Q psy14726 535 AY--H---ECIYVIGGFNGMSRMCNGEKYNPVT--KTWSQ--VPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVEC 604 (712)
Q Consensus 535 ~~--~---~~iyv~GG~~~~~~~~~v~~yd~~~--~~W~~--~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~ 604 (712)
.. + +.+++.|+.+ ..+..||..+ ..|.. +........-.+++.. ++.+++.||.++ .+.+
T Consensus 211 ~~sp~~~~~~~las~s~D-----~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~-----~v~l 280 (297)
T 2pm7_B 211 AWSPTVLLRSYMASVSQD-----RTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDN-----KVTL 280 (297)
T ss_dssp EECCCCSSSEEEEEEETT-----SCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTS-----CEEE
T ss_pred EECCCCCCceEEEEEECC-----CcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCC-----cEEE
Confidence 33 2 3677777765 4566777655 34543 2111111111222222 677888888765 3556
Q ss_pred EECC-CCeEEEccCC
Q psy14726 605 YDEK-TDEWYEATDM 618 (712)
Q Consensus 605 yd~~-~~~W~~~~~~ 618 (712)
|+.. .+.|..+..+
T Consensus 281 w~~~~~g~w~~~~~~ 295 (297)
T 2pm7_B 281 WKENLEGKWEPAGEV 295 (297)
T ss_dssp EEECTTSCEEEC---
T ss_pred EEECCCCcEEecccc
Confidence 6654 4689877654
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=96.67 E-value=0.16 Score=50.69 Aligned_cols=211 Identities=10% Similarity=0.054 Sum_probs=112.3
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 474 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 474 (712)
++.+|++.-. ...+++||+.+++...... +. + -.+++. -+|++|+..+ ..+.+||+.+.+++.+
T Consensus 24 ~~~l~~~d~~-----~~~i~~~d~~~~~~~~~~~-~~-~-~~~i~~~~dG~l~v~~~-------~~l~~~d~~~g~~~~~ 88 (297)
T 3g4e_A 24 SNSLLFVDIP-----AKKVCRWDSFTKQVQRVTM-DA-P-VSSVALRQSGGYVATIG-------TKFCALNWKEQSAVVL 88 (297)
T ss_dssp TTEEEEEETT-----TTEEEEEETTTCCEEEEEC-SS-C-EEEEEEBTTSSEEEEET-------TEEEEEETTTTEEEEE
T ss_pred CCEEEEEECC-----CCEEEEEECCCCcEEEEeC-CC-c-eEEEEECCCCCEEEEEC-------CeEEEEECCCCcEEEE
Confidence 4678877642 3568999999887654422 21 1 223333 3667776531 5799999999998877
Q ss_pred ccCCcc--ccceeEEEE--CCEEEEEcccCC------CCccCceEEeeCCCCeeEEeC-CCCCCCcceEEEEE-C-CEEE
Q psy14726 475 APMNVE--RSDASATTL--QGKIYITGGFNG------HNCLNSCEVYDPECNQWTLIE-PMRHRRSGVSCIAY-H-ECIY 541 (712)
Q Consensus 475 ~~~p~~--r~~~~~~~~--~~~iyv~GG~~~------~~~~~~v~~yd~~~~~W~~~~-~~p~~r~~~~~~~~-~-~~iy 541 (712)
...+.. ........+ +|++|+..-... ......++++|+.. +...+. .+.. ..+.+.. + ..+|
T Consensus 89 ~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~~~~~---pngi~~spdg~~ly 164 (297)
T 3g4e_A 89 ATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFDQVDI---SNGLDWSLDHKIFY 164 (297)
T ss_dssp EECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEEEESB---EEEEEECTTSCEEE
T ss_pred EecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEeecccc---ccceEEcCCCCEEE
Confidence 544321 111222333 678887431111 01235789998863 333322 1111 1233333 3 4688
Q ss_pred EEcCCCCCCccceEEEEeC--CCCcEEE---cCCCCCC-ccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCeEEE
Q psy14726 542 VIGGFNGMSRMCNGEKYNP--VTKTWSQ---VPDMYNP-RSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEWYE 614 (712)
Q Consensus 542 v~GG~~~~~~~~~v~~yd~--~~~~W~~---~~~~p~~-r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 614 (712)
+.... ...+++||. .+..... +..++.. ..-.+++.- ++.||+..... ..|.+||+++++...
T Consensus 165 v~~~~-----~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~-----~~v~~~d~~tG~~~~ 234 (297)
T 3g4e_A 165 YIDSL-----SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNG-----GRVIRLDPVTGKRLQ 234 (297)
T ss_dssp EEEGG-----GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETT-----TEEEEECTTTCCEEE
T ss_pred EecCC-----CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCC-----CEEEEEcCCCceEEE
Confidence 87642 357888875 4554421 1112211 111233332 67888764322 258999999877654
Q ss_pred ccCCCCcccceEEEEEcC----cceeE
Q psy14726 615 ATDMNIYRSALSACVIMG----LPNVY 637 (712)
Q Consensus 615 ~~~~p~~r~~~~~~~~~~----~~~v~ 637 (712)
.-.+|.. ...++.+.+ .+||.
T Consensus 235 ~i~~p~~--~~t~~~f~g~d~~~L~vt 259 (297)
T 3g4e_A 235 TVKLPVD--KTTSCCFGGKNYSEMYVT 259 (297)
T ss_dssp EEECSSS--BEEEEEEESGGGCEEEEE
T ss_pred EEECCCC--CceEEEEeCCCCCEEEEE
Confidence 4344432 344555543 56765
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=96.67 E-value=0.036 Score=57.32 Aligned_cols=239 Identities=11% Similarity=0.104 Sum_probs=112.4
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcc-eEEEEE-CCEEEEEeecCCCCccceEEEEECCCCc-E
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAY-HGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKV-W 424 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~-~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~-W 424 (712)
+.+++.|+.+ ..+..||..++.|..+. .+...... .+++.. ++..++.|+.+ ..+..||..++. |
T Consensus 23 g~~l~~~~~d-----~~i~iw~~~~~~~~~~~--~~~~h~~~v~~~~~s~~~~~l~s~s~d-----~~v~vwd~~~~~~~ 90 (377)
T 3dwl_C 23 RTEFVTTTAT-----NQVELYEQDGNGWKHAR--TFSDHDKIVTCVDWAPKSNRIVTCSQD-----RNAYVYEKRPDGTW 90 (377)
T ss_dssp SSEEECCCSS-----SCBCEEEEETTEEEECC--CBCCCSSCEEEEEECTTTCCEEEEETT-----SSEEEC------CC
T ss_pred CCEEEEecCC-----CEEEEEEccCCceEEEE--EEecCCceEEEEEEeCCCCEEEEEeCC-----CeEEEEEcCCCCce
Confidence 4456666532 34667888888776632 22222222 233333 56777777754 358888888876 5
Q ss_pred EEeCCCCCCcceeEEEEE--CCeEEEEcccCCCCCCceeEEeecCCCc-eEEcccCCc-cccceeEEEE--CCEEEEEcc
Q psy14726 425 KEIAPMNFKRCYVSTAVH--HDVIYAMGGYNGQRRQNSVEKYNYTENQ-WSLIAPMNV-ERSDASATTL--QGKIYITGG 498 (712)
Q Consensus 425 ~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~~~p~-~r~~~~~~~~--~~~iyv~GG 498 (712)
.....+.........+.+ +++.++.|+.+ ..+..||..+.+ |.....+.. .......+.+ ++++++.|+
T Consensus 91 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 165 (377)
T 3dwl_C 91 KQTLVLLRLNRAATFVRWSPNEDKFAVGSGA-----RVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGC 165 (377)
T ss_dssp CCEEECCCCSSCEEEEECCTTSSCCEEEESS-----SCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEE
T ss_pred eeeeEecccCCceEEEEECCCCCEEEEEecC-----CeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEe
Confidence 443333222222222222 56777777654 357888887764 443333332 1122222333 667778887
Q ss_pred cCCCCccCceEEeeCCCCe----------------eEEeCCCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeC
Q psy14726 499 FNGHNCLNSCEVYDPECNQ----------------WTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNP 560 (712)
Q Consensus 499 ~~~~~~~~~v~~yd~~~~~----------------W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~ 560 (712)
.++ .+..||..+.. -+.+..+. .......+.+ ++++++.|+.+ ..+..||.
T Consensus 166 ~d~-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~d-----~~i~iwd~ 234 (377)
T 3dwl_C 166 ADR-----KAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYP-SGGWVHAVGFSPSGNALAYAGHD-----SSVTIAYP 234 (377)
T ss_dssp SSS-----CEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCC-CSSSEEEEEECTTSSCEEEEETT-----TEEC-CEE
T ss_pred CCC-----EEEEEEEEecccCCCccccccccccchhhhhhccc-CCceEEEEEECCCCCEEEEEeCC-----CcEEEEEC
Confidence 653 47777765332 22222221 1111222233 56667777654 45677777
Q ss_pred CCCcE--EEcCCCCCCccc-eEEE-EECCEEEEEcccCCCceeeeEEEEECCCCeEEEccCCCC
Q psy14726 561 VTKTW--SQVPDMYNPRSN-FAIE-VIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNI 620 (712)
Q Consensus 561 ~~~~W--~~~~~~p~~r~~-~~~~-~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~ 620 (712)
.+.+- ..+..+...... .+++ .-++++++.|+.+ .+.+|+.....|.....+..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~------~~~~~~~~~~~~~~~~~~~~ 292 (377)
T 3dwl_C 235 SAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNY------SPILLQGNESGWAHTRDLDA 292 (377)
T ss_dssp CSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSS------SEEEECCCC---CCSBCCCS
T ss_pred CCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCC------cEEEEEeCCCceEEEeeecc
Confidence 66532 223222222211 2222 2378877776532 34577777777877655543
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=96.66 E-value=0.45 Score=49.63 Aligned_cols=188 Identities=10% Similarity=0.094 Sum_probs=99.1
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 474 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 474 (712)
++..++.|+.+ ..+..||..+++-...-.... ..-.+++. -++++++.|+.+ ..+.+||..+.+-.
T Consensus 108 ~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s~s~d-----~~i~iwd~~~~~~~-- 174 (420)
T 3vl1_A 108 QMRRFILGTTE-----GDIKVLDSNFNLQREIDQAHV-SEITKLKFFPSGEALISSSQD-----MQLKIWSVKDGSNP-- 174 (420)
T ss_dssp SSCEEEEEETT-----SCEEEECTTSCEEEEETTSSS-SCEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCCC--
T ss_pred CCCEEEEEECC-----CCEEEEeCCCcceeeeccccc-CccEEEEECCCCCEEEEEeCC-----CeEEEEeCCCCcCc--
Confidence 67778888754 358899988776544322111 11223333 256777777754 46889998765421
Q ss_pred ccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCC-CCCCcce-EEEE---------------
Q psy14726 475 APMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPM-RHRRSGV-SCIA--------------- 535 (712)
Q Consensus 475 ~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-p~~r~~~-~~~~--------------- 535 (712)
..+........++.+ ++..++.|+.++ .+..||..+.+-...-.. ....... +++.
T Consensus 175 ~~~~~h~~~v~~~~~~~~~~~l~s~~~d~-----~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 249 (420)
T 3vl1_A 175 RTLIGHRATVTDIAIIDRGRNVLSASLDG-----TIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSK 249 (420)
T ss_dssp EEEECCSSCEEEEEEETTTTEEEEEETTS-----CEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCC
T ss_pred eEEcCCCCcEEEEEEcCCCCEEEEEcCCC-----cEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCc
Confidence 111111111122222 566777777654 588888887753322111 1111111 1111
Q ss_pred -------ECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE-CCE-EEEEcccCCCceeeeEEEEE
Q psy14726 536 -------YHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DDM-IFAIGGFNGVTTIYHVECYD 606 (712)
Q Consensus 536 -------~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-i~v~GG~~~~~~~~~v~~yd 606 (712)
-++..++.|+.+ ..+..||..+.+-...-.......-.+++.. ++. +++.|+.++ .+.+||
T Consensus 250 v~~~~~s~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg-----~i~vwd 319 (420)
T 3vl1_A 250 KNNLEFGTYGKYVIAGHVS-----GVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENG-----MLAQWD 319 (420)
T ss_dssp CCTTCSSCTTEEEEEEETT-----SCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTS-----EEEEEE
T ss_pred ccceEEcCCCCEEEEEcCC-----CeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCC-----eEEEEE
Confidence 256777777654 4588999887653222111111112222222 444 778888665 688999
Q ss_pred CCCCe
Q psy14726 607 EKTDE 611 (712)
Q Consensus 607 ~~~~~ 611 (712)
..+..
T Consensus 320 ~~~~~ 324 (420)
T 3vl1_A 320 LRSPE 324 (420)
T ss_dssp TTCTT
T ss_pred cCCCc
Confidence 88753
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=96.65 E-value=0.1 Score=54.96 Aligned_cols=222 Identities=8% Similarity=0.048 Sum_probs=111.1
Q ss_pred eEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEe
Q psy14726 349 ILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEI 427 (712)
Q Consensus 349 ~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 427 (712)
.+++.|+.+ ..|..+|..+++.... .... ...-.++++. ++.+++.||.++ .+..||..+.+-..
T Consensus 121 ~~l~s~s~D-----g~i~vwd~~~~~~~~~--l~~h-~~~V~~v~~~~~~~~l~sgs~D~-----~i~iwd~~~~~~~~- 186 (410)
T 1vyh_C 121 SVMVSASED-----ATIKVWDYETGDFERT--LKGH-TDSVQDISFDHSGKLLASCSADM-----TIKLWDFQGFECIR- 186 (410)
T ss_dssp SEEEEEESS-----SCEEEEETTTCCCCEE--ECCC-SSCEEEEEECTTSSEEEEEETTS-----CCCEEETTSSCEEE-
T ss_pred CEEEEEeCC-----CeEEEEECCCCcEEEE--Eecc-CCcEEEEEEcCCCCEEEEEeCCC-----eEEEEeCCCCceeE-
Confidence 455666532 3577888777654321 1111 1111223333 567778888643 46778877654322
Q ss_pred CCCCCCcceeE-EEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCC
Q psy14726 428 APMNFKRCYVS-TAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHN 503 (712)
Q Consensus 428 ~~~~~~r~~~~-~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~ 503 (712)
.+........ ++. .++..++.||.+ ..+..||..+...... +........++.. ++.+++.||.++
T Consensus 187 -~~~~h~~~V~~v~~~p~~~~l~s~s~D-----~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~g~~l~s~s~D~-- 256 (410)
T 1vyh_C 187 -TMHGHDHNVSSVSIMPNGDHIVSASRD-----KTIKMWEVQTGYCVKT--FTGHREWVRMVRPNQDGTLIASCSNDQ-- 256 (410)
T ss_dssp -CCCCCSSCEEEEEECSSSSEEEEEETT-----SEEEEEETTTCCEEEE--EECCSSCEEEEEECTTSSEEEEEETTS--
T ss_pred -EEcCCCCCEEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCcEEEE--EeCCCccEEEEEECCCCCEEEEEcCCC--
Confidence 2222112222 222 256677777754 4688999887754221 1111111222222 567788887664
Q ss_pred ccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE----------------------CCEEEEEcCCCCCCccceEEEEeCC
Q psy14726 504 CLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY----------------------HECIYVIGGFNGMSRMCNGEKYNPV 561 (712)
Q Consensus 504 ~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~----------------------~~~iyv~GG~~~~~~~~~v~~yd~~ 561 (712)
.+..||..+......- ........++.+ .+.+++.|+.+ ..+..||..
T Consensus 257 ---~v~vwd~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D-----~~i~iwd~~ 326 (410)
T 1vyh_C 257 ---TVRVWVVATKECKAEL--REHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD-----KTIKMWDVS 326 (410)
T ss_dssp ---CEEEEETTTCCEEEEE--CCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETT-----SEEEEEETT
T ss_pred ---eEEEEECCCCceeeEe--cCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCC-----CeEEEEECC
Confidence 5777887766543221 101111111111 24566677654 468899987
Q ss_pred CCcEEEcCCCCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 562 TKTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 562 ~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
+.+-... +.........+.+ +++.++.||.++ .+.+||..+.+
T Consensus 327 ~~~~~~~--~~~h~~~v~~v~~~~~g~~l~s~s~D~-----~i~vwd~~~~~ 371 (410)
T 1vyh_C 327 TGMCLMT--LVGHDNWVRGVLFHSGGKFILSCADDK-----TLRVWDYKNKR 371 (410)
T ss_dssp TTEEEEE--EECCSSCEEEEEECSSSSCEEEEETTT-----EEEEECCTTSC
T ss_pred CCceEEE--EECCCCcEEEEEEcCCCCEEEEEeCCC-----eEEEEECCCCc
Confidence 7642211 1111111122222 567777887665 67888876643
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=96.64 E-value=0.055 Score=54.74 Aligned_cols=242 Identities=17% Similarity=0.212 Sum_probs=118.7
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE---CCEEEEEeecCCCCccceEEEEECCCCcE
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI---GYNIYVIGGFDGNEYYNSCRCFNAVTKVW 424 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~v~~yd~~~~~W 424 (712)
+..++.|+.+ ..+..+|..++....+..... ....-.+++.. ++.+++.|+.+ ..+..+|..+++|
T Consensus 25 g~~lasgs~D-----~~v~lwd~~~~~~~~~~~l~g-H~~~V~~v~~~~~~~~~~l~s~s~D-----~~v~iWd~~~~~~ 93 (316)
T 3bg1_A 25 GTRLATCSSD-----RSVKIFDVRNGGQILIADLRG-HEGPVWQVAWAHPMYGNILASCSYD-----RKVIIWREENGTW 93 (316)
T ss_dssp GCEEEEEETT-----TEEEEEEEETTEEEEEEEEEC-CSSCEEEEEECCGGGSSCEEEEETT-----SCEEEECCSSSCC
T ss_pred CCEEEEEeCC-----CeEEEEEecCCCcEEEEEEcC-CCccEEEEEeCCCCCCCEEEEEECC-----CEEEEEECCCCcc
Confidence 3456666642 357778877664322111000 01111223332 25677777754 3588899988877
Q ss_pred EEeCCCCCCcce-eEEEEE-C--CeEEEEcccCCCCCCceeEEeecCCC-ceEEcccCCccccceeEEEE----------
Q psy14726 425 KEIAPMNFKRCY-VSTAVH-H--DVIYAMGGYNGQRRQNSVEKYNYTEN-QWSLIAPMNVERSDASATTL---------- 489 (712)
Q Consensus 425 ~~~~~~~~~r~~-~~~~~~-~--~~iyv~GG~~~~~~~~~v~~yd~~~~-~W~~~~~~p~~r~~~~~~~~---------- 489 (712)
..+..+...... .+++.. + +.+++.|+.+ ..+..||..+. .|.....+........++..
T Consensus 94 ~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D-----~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 168 (316)
T 3bg1_A 94 EKSHEHAGHDSSVNSVCWAPHDYGLILACGSSD-----GAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLI 168 (316)
T ss_dssp CEEEEECCCSSCCCEEEECCTTTCSCEEEECSS-----SCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC----
T ss_pred eEEEEccCCCCceEEEEECCCCCCcEEEEEcCC-----CCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcccc
Confidence 544332211111 223332 2 5677777754 35777777665 56543222111111111111
Q ss_pred ---------CCEEEEEcccCCCCccCceEEeeCC-CCeeEEeCCCCCCCcceEEEEE--C----CEEEEEcCCCCCCccc
Q psy14726 490 ---------QGKIYITGGFNGHNCLNSCEVYDPE-CNQWTLIEPMRHRRSGVSCIAY--H----ECIYVIGGFNGMSRMC 553 (712)
Q Consensus 490 ---------~~~iyv~GG~~~~~~~~~v~~yd~~-~~~W~~~~~~p~~r~~~~~~~~--~----~~iyv~GG~~~~~~~~ 553 (712)
.++.++.||.++ .+..+|.. ...|..+..+.........+.+ + +.+++.|+.+ .
T Consensus 169 ~~~~~~~~~~~~~l~sgs~D~-----~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D-----~ 238 (316)
T 3bg1_A 169 DHPSGQKPNYIKRFASGGCDN-----LIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQD-----G 238 (316)
T ss_dssp --CCSCCCCCCCBEECCBTTS-----BCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETT-----C
T ss_pred ccccccCccccceEEEecCCC-----eEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCC-----C
Confidence 135667776653 45566665 3457666554322222223333 2 2567777754 4
Q ss_pred eEEEEeCCC---CcEEE--cCCCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECC-CCeEEEccCCCCcc
Q psy14726 554 NGEKYNPVT---KTWSQ--VPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEK-TDEWYEATDMNIYR 622 (712)
Q Consensus 554 ~v~~yd~~~---~~W~~--~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~-~~~W~~~~~~p~~r 622 (712)
.+..||..+ ..|.. +... ...-.+++.. ++.+++.||.++ .+.+|+.. .+.|..+..+..+-
T Consensus 239 ~v~iw~~~~~~~~~~~~~~~~~~--~~~v~~v~~sp~g~~las~~~D~-----~v~lw~~~~~g~~~~~~~~~~~~ 307 (316)
T 3bg1_A 239 RVFIWTCDDASSNTWSPKLLHKF--NDVVWHVSWSITANILAVSGGDN-----KVTLWKESVDGQWVCISDVNKGQ 307 (316)
T ss_dssp EEEEEECSSTTCCCCBCCEEEEC--SSCEEEEEECTTTCCEEEEESSS-----CEEEEEECTTSCEEEEEECC---
T ss_pred eEEEEEccCccccchhhhhhhcC--CCcEEEEEEcCCCCEEEEEcCCC-----eEEEEEECCCCcEEEeeeccCCC
Confidence 677787765 23321 1111 1111122222 677888888765 46667654 56898887766544
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.64 E-value=0.2 Score=50.87 Aligned_cols=237 Identities=13% Similarity=0.198 Sum_probs=117.0
Q ss_pred EEEEeecCCCCCCceEEEEECCCCcEEEcccCCCC-CCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCC-----
Q psy14726 350 LFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPM-GPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTK----- 422 (712)
Q Consensus 350 i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~-~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~----- 422 (712)
+++.|+.+ ..+..+|...+.+..+...... ....-.+++.. ++.+++.|+.++ .+..+|....
T Consensus 26 ~las~~~D-----~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~-----~v~iw~~~~~~~~~~ 95 (330)
T 2hes_X 26 ILATGSTD-----RKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDS-----TVSIWAKEESADRTF 95 (330)
T ss_dssp EEEEEESS-----SCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTS-----CEEEEEC-------C
T ss_pred EEEEEcCC-----CEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCC-----cEEEEEcccCcCccc
Confidence 55566532 3577788776544322111111 11122233333 667777887543 4677776432
Q ss_pred cEEEeCCCCCCccee-EEEE-ECCeEEEEcccCCCCCCceeEEeecCC--CceEEcccCCccccceeEEEE--CCEEEEE
Q psy14726 423 VWKEIAPMNFKRCYV-STAV-HHDVIYAMGGYNGQRRQNSVEKYNYTE--NQWSLIAPMNVERSDASATTL--QGKIYIT 496 (712)
Q Consensus 423 ~W~~~~~~~~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~--~~W~~~~~~p~~r~~~~~~~~--~~~iyv~ 496 (712)
.+..+..+....... +++. .+++.++.|+.+ ..+.+||... ..+..+..+..-......+.+ ++.+++.
T Consensus 96 ~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D-----~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s 170 (330)
T 2hes_X 96 EMDLLAIIEGHENEVKGVAWSNDGYYLATCSRD-----KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLAS 170 (330)
T ss_dssp CCEEEEEEC----CEEEEEECTTSCEEEEEETT-----SCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEE
T ss_pred cceeEEEEcCCCCcEEEEEECCCCCEEEEEeCC-----CEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEE
Confidence 222222221111111 2222 256777777754 4578888743 345444333222222223333 5677888
Q ss_pred cccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--C--CEEEEEcCCCCCCccceEEEEeCCC------CcEE
Q psy14726 497 GGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--H--ECIYVIGGFNGMSRMCNGEKYNPVT------KTWS 566 (712)
Q Consensus 497 GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~v~~yd~~~------~~W~ 566 (712)
||.++ .+..+|..+..|+.+..+.........+.+ + +..++.|+.+ ..+..||..+ ..|.
T Consensus 171 ~s~D~-----~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D-----~~v~iw~~~~~~~~~~~~~~ 240 (330)
T 2hes_X 171 SSYDD-----TVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDD-----STVRVWKYMGDDEDDQQEWV 240 (330)
T ss_dssp EETTS-----CEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETT-----SCEEEEEEEEECTTSCEEEE
T ss_pred EcCCC-----eEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCC-----CeEEEEEecCCCccccceeE
Confidence 87664 577788777777766544322222222222 2 3456666654 3455555432 2455
Q ss_pred EcCCCCC--CccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeEEEcc
Q psy14726 567 QVPDMYN--PRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEAT 616 (712)
Q Consensus 567 ~~~~~p~--~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 616 (712)
....++. ...-.+++...+.+++.||.++ .+.+||..++.|..+.
T Consensus 241 ~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg-----~v~iw~~~~~~~~~~~ 287 (330)
T 2hes_X 241 CEAILPDVHKRQVYNVAWGFNGLIASVGADG-----VLAVYEEVDGEWKVFA 287 (330)
T ss_dssp EEEECCSCCSSCEEEEEECTTSCEEEEETTS-----CEEEEEEETTEEEEEE
T ss_pred EeeecccccccceEEEEEcCCCEEEEEeCCC-----EEEEEEcCCCceEEEe
Confidence 5443332 1222233333455677777665 5778888888886553
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=96.64 E-value=0.51 Score=53.22 Aligned_cols=118 Identities=14% Similarity=0.193 Sum_probs=73.7
Q ss_pred EEEECCEEEEEeecCCCCccceEEEEECCCCc--EEEeCCCCCC--------cceeEEEEECCeEEEEcccCCCCCCcee
Q psy14726 392 TAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKV--WKEIAPMNFK--------RCYVSTAVHHDVIYAMGGYNGQRRQNSV 461 (712)
Q Consensus 392 ~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~~~~--------r~~~~~~~~~~~iyv~GG~~~~~~~~~v 461 (712)
-++.++.||+... ...++.+|..+++ |+.-...+.. ....+.++.+++||+... ...+
T Consensus 62 P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------dg~l 129 (668)
T 1kv9_A 62 PLFHDGVIYTSMS------WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL------DGRL 129 (668)
T ss_dssp CEEETTEEEEEEG------GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT------TSEE
T ss_pred CEEECCEEEEECC------CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC------CCEE
Confidence 3456999998865 2469999998876 8764433211 012335667889988642 2469
Q ss_pred EEeecCCCc--eEEcccCCc--cccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCe--eEEe
Q psy14726 462 EKYNYTENQ--WSLIAPMNV--ERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQ--WTLI 521 (712)
Q Consensus 462 ~~yd~~~~~--W~~~~~~p~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~ 521 (712)
+.+|..|.+ |+.-..-+. .....+.++.++.+|+..+.........+..||..+++ |+.-
T Consensus 130 ~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 130 IALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp EEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 999988765 876432211 12223445678998875432211234579999998876 8764
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=96.63 E-value=0.18 Score=58.29 Aligned_cols=209 Identities=9% Similarity=0.085 Sum_probs=117.1
Q ss_pred eEEEEECCCCcEEEcccCCCCCC-CcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCC--C--CC-cce
Q psy14726 364 FVETYDTRADRWVKIEQVDPMGP-RAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPM--N--FK-RCY 436 (712)
Q Consensus 364 ~v~~~d~~~~~W~~~~~~~~~~~-r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~--~--~~-r~~ 436 (712)
.+..||+.++++..+.......+ ..-.++... ++.|++... ..+++||+.+++|...... + .+ ..-
T Consensus 428 Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i 500 (795)
T 4a2l_A 428 GLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-------SALVRFNPEQRSFTTIEKEKDGTPVVSKQI 500 (795)
T ss_dssp EEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-------SCEEEEETTTTEEEECCBCTTCCBCCCCCE
T ss_pred ceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-------CceeEEeCCCCeEEEccccccccccCCceE
Confidence 57788888888776532111111 111222222 566766432 3489999999999887543 1 11 111
Q ss_pred eEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccC---Ccccccee-EEEE--CCEEEEEcccCCCCccCceE
Q psy14726 437 VSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPM---NVERSDAS-ATTL--QGKIYITGGFNGHNCLNSCE 509 (712)
Q Consensus 437 ~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~---p~~r~~~~-~~~~--~~~iyv~GG~~~~~~~~~v~ 509 (712)
.++.. -+|.|++... .-+++||+.++++ ..... +....... +... +|.|++... ..+.
T Consensus 501 ~~i~~d~~g~lWigt~-------~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-------~Gl~ 565 (795)
T 4a2l_A 501 TTLFRDSHKRLWIGGE-------EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-------EGFY 565 (795)
T ss_dssp EEEEECTTCCEEEEES-------SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-------SCEE
T ss_pred EEEEECCCCCEEEEeC-------CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-------CCce
Confidence 22222 3567887532 3489999999888 43311 10111111 2222 577887432 2489
Q ss_pred EeeCCCCeeEEeC---CCCCCCcceEEEEE-CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcC---CCCCCccce-EEE
Q psy14726 510 VYDPECNQWTLIE---PMRHRRSGVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVP---DMYNPRSNF-AIE 581 (712)
Q Consensus 510 ~yd~~~~~W~~~~---~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~---~~p~~r~~~-~~~ 581 (712)
+||+.+++++... .+|.... .+++.- +|.|++.+. ..+.+|||++.++.... .++...... +++
T Consensus 566 ~~d~~~~~~~~~~~~~gl~~~~i-~~i~~d~~g~lWi~t~-------~Gl~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~ 637 (795)
T 4a2l_A 566 CFNEKDKQIKRYNTTNGLPNNVV-YGILEDSFGRLWLSTN-------RGISCFNPETEKFRNFTESDGLQSNQFNTASYC 637 (795)
T ss_dssp EEETTTTEEEEECGGGTCSCSCE-EEEEECTTSCEEEEET-------TEEEEEETTTTEEEEECGGGTCSCSCEEEEEEE
T ss_pred eECCCCCcEEEeCCCCCCchhhe-EEEEECCCCCEEEEcC-------CceEEEcCCCCcEEEcCCcCCCccccCccCcee
Confidence 9999999998775 2443322 233332 578888763 56889999999988763 244333322 333
Q ss_pred EE-CCEEEEEcccCCCceeeeEEEEECCC
Q psy14726 582 VI-DDMIFAIGGFNGVTTIYHVECYDEKT 609 (712)
Q Consensus 582 ~~-~~~i~v~GG~~~~~~~~~v~~yd~~~ 609 (712)
.. +|.|| +||.+| +..|||+.
T Consensus 638 ~~~~G~l~-~g~~~G------l~~~~p~~ 659 (795)
T 4a2l_A 638 RTSVGQMY-FGGING------ITTFRPEL 659 (795)
T ss_dssp ECTTSCEE-EEETTE------EEEECGGG
T ss_pred ECCCCeEE-EecCCc------eEEEcHHH
Confidence 33 45555 466543 56677654
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=96.62 E-value=0.71 Score=46.66 Aligned_cols=225 Identities=10% Similarity=0.051 Sum_probs=123.1
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCC--cEEEeCCCC-------C
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTK--VWKEIAPMN-------F 432 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~~-------~ 432 (712)
..+..+|+.+++...... ...-..-+++++. ++.+|+.... ...+.+||+... .-..+.... .
T Consensus 69 ~~i~~~d~~~g~~~~~~~--~~~~~~p~gia~d~~g~l~v~d~~-----~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~ 141 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSG--KNLFYLPHGLSIDTDGNYWVTDVA-----LHQVFKLDPHSKEGPLLILGRSMQPGSDQNH 141 (329)
T ss_dssp CCEEEECTTTCCEEEEEC--TTTCSSEEEEEECTTSCEEEEETT-----TTEEEEECTTCSSCCSEEESBTTBCCCSTTC
T ss_pred CcEEEEECCCCeEEeccC--CCccCCceEEEECCCCCEEEEECC-----CCEEEEEeCCCCeEEEEEecccCCCCCCccc
Confidence 358899998777654211 1111233455555 6778887653 256899998765 223332211 1
Q ss_pred CcceeEEEEE--CCeEEEEcccCCCCCCceeEEeecCCCceEEcccC-------CccccceeEEEE--C-CEEEEEcccC
Q psy14726 433 KRCYVSTAVH--HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPM-------NVERSDASATTL--Q-GKIYITGGFN 500 (712)
Q Consensus 433 ~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-------p~~r~~~~~~~~--~-~~iyv~GG~~ 500 (712)
...-..+++. ++.|||..+.. .+.+.+||+....-..+... +........+.+ + +.|||....+
T Consensus 142 ~~~P~~ia~~~~~g~lyv~d~~~----~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~ 217 (329)
T 3fvz_A 142 FCQPTDVAVEPSTGAVFVSDGYC----NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADREN 217 (329)
T ss_dssp CSSEEEEEECTTTCCEEEEECSS----CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTT
T ss_pred cCCCcEEEEeCCCCeEEEEeCCC----CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCC
Confidence 1123345554 68999987521 25789999665543333211 111122333333 4 8999987543
Q ss_pred CCCccCceEEeeCCCCeeEEeCCCC-CCCcceEEEEECCEEEEEcCCC--CCCccceEEEEeCCCCcEEEc-CCCCCCcc
Q psy14726 501 GHNCLNSCEVYDPECNQWTLIEPMR-HRRSGVSCIAYHECIYVIGGFN--GMSRMCNGEKYNPVTKTWSQV-PDMYNPRS 576 (712)
Q Consensus 501 ~~~~~~~v~~yd~~~~~W~~~~~~p-~~r~~~~~~~~~~~iyv~GG~~--~~~~~~~v~~yd~~~~~W~~~-~~~p~~r~ 576 (712)
+.+.+||+.+++....-..+ ....-.+++...+.+|...|.. .......+..+|+.+.+.... +..+....
T Consensus 218 -----~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~ 292 (329)
T 3fvz_A 218 -----GRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFD 292 (329)
T ss_dssp -----TEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCS
T ss_pred -----CEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccC
Confidence 57999999877654432222 2222233444457788877732 122245789999888766554 22122222
Q ss_pred -ceEEEEE-CCEEEEEcccCCCceeeeEEEEECC
Q psy14726 577 -NFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEK 608 (712)
Q Consensus 577 -~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~ 608 (712)
-.++++- ++.|||....++ .|.+|++.
T Consensus 293 ~p~~ia~~~dG~lyvad~~~~-----~I~~~~~~ 321 (329)
T 3fvz_A 293 MPHDIVASEDGTVYIGDAHTN-----TVWKFTLT 321 (329)
T ss_dssp SEEEEEECTTSEEEEEESSSC-----CEEEEEEE
T ss_pred CeeEEEECCCCCEEEEECCCC-----EEEEEeCC
Confidence 2333333 678998865433 57777764
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=96.58 E-value=0.55 Score=53.12 Aligned_cols=118 Identities=18% Similarity=0.264 Sum_probs=73.6
Q ss_pred EEEECCEEEEEeecCCCCccceEEEEECCCCc--EEEeCCCCCC--------cceeEEEEECCeEEEEcccCCCCCCcee
Q psy14726 392 TAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKV--WKEIAPMNFK--------RCYVSTAVHHDVIYAMGGYNGQRRQNSV 461 (712)
Q Consensus 392 ~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~~~~--------r~~~~~~~~~~~iyv~GG~~~~~~~~~v 461 (712)
-++.++.||+.+. ...++.+|..+++ |+.-...+.. ....+.++.+++||+.+. ...+
T Consensus 66 P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~------dg~l 133 (689)
T 1yiq_A 66 PIVVDGVMYTTGP------FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL------DGRL 133 (689)
T ss_dssp CEEETTEEEEECG------GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT------TSEE
T ss_pred CEEECCEEEEEcC------CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc------CCEE
Confidence 3456999998765 2469999998876 8764333211 012234667899988643 2468
Q ss_pred EEeecCCCc--eEEccc-CCc--cccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCe--eEEe
Q psy14726 462 EKYNYTENQ--WSLIAP-MNV--ERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQ--WTLI 521 (712)
Q Consensus 462 ~~yd~~~~~--W~~~~~-~p~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~ 521 (712)
+.+|..|.+ |+.-.. -+. .....+.++.++.+|+-.+.........+..||..|++ |+.-
T Consensus 134 ~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 134 EAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp EEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 999998764 876542 111 12223345679998884332211234579999999877 8765
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=96.56 E-value=0.38 Score=48.87 Aligned_cols=243 Identities=10% Similarity=0.085 Sum_probs=117.3
Q ss_pred EEEeecCCCC-CCceEEEEECCCCcEEEcccC-CCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEe
Q psy14726 351 FAIGGWSGGS-PTDFVETYDTRADRWVKIEQV-DPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEI 427 (712)
Q Consensus 351 ~~~GG~~~~~-~~~~v~~~d~~~~~W~~~~~~-~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 427 (712)
+.+|.+.... ..-.++.+|..++++..+... ....| ..+++. ++++|+.+... ....++.||..+++++.+
T Consensus 5 ~~vg~y~~~~~~~i~v~~~d~~tg~~~~~~~~~~~~~p---~~~a~spdg~l~~~~~~~---~~~~v~~~~~~~g~~~~~ 78 (347)
T 3hfq_A 5 ILFGTYTKKTSQGIYQGTLDTTAKTLTNDGLLAATQNP---TYLALSAKDCLYSVDKED---DEGGIAAWQIDGQTAHKL 78 (347)
T ss_dssp EEEEECCSSSCCEEEEEEEETTTTEEEEEEEEEECSCC---CCEEECTTCEEEEEEEET---TEEEEEEEEEETTEEEEE
T ss_pred EEEEeccCCCCCCEEEEEEcCCCCeEEEeeeeeccCCc---ceEEEccCCeEEEEEecC---CCceEEEEEecCCcEEEe
Confidence 4556554322 122367778888887653211 11112 223333 67777776421 125689999988887766
Q ss_pred CCCCC-CcceeEEE-EECCe-EEEEcccCCCCCCceeEEeecC-CCceEEcccCCc------ccc---ceeEEEE--CCE
Q psy14726 428 APMNF-KRCYVSTA-VHHDV-IYAMGGYNGQRRQNSVEKYNYT-ENQWSLIAPMNV------ERS---DASATTL--QGK 492 (712)
Q Consensus 428 ~~~~~-~r~~~~~~-~~~~~-iyv~GG~~~~~~~~~v~~yd~~-~~~W~~~~~~p~------~r~---~~~~~~~--~~~ 492 (712)
..... ...-..++ .-+++ ||+.+.. ...+.+||.. +.+...+...+. .|. ....+.+ +++
T Consensus 79 ~~~~~~~~~p~~~a~spdg~~l~~~~~~-----~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~ 153 (347)
T 3hfq_A 79 NTVVAPGTPPAYVAVDEARQLVYSANYH-----KGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR 153 (347)
T ss_dssp EEEEEESCCCSEEEEETTTTEEEEEETT-----TTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC
T ss_pred eeeecCCCCCEEEEECCCCCEEEEEeCC-----CCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc
Confidence 54221 11112233 34554 6665421 2467778774 334443322211 111 1122333 667
Q ss_pred EEEEcccCCCCccCceEEeeCC-CCeeEEeCC--CCCC-CcceEEEEECC-EEEEEcCCCCCCccceEEEE--eCCCCcE
Q psy14726 493 IYITGGFNGHNCLNSCEVYDPE-CNQWTLIEP--MRHR-RSGVSCIAYHE-CIYVIGGFNGMSRMCNGEKY--NPVTKTW 565 (712)
Q Consensus 493 iyv~GG~~~~~~~~~v~~yd~~-~~~W~~~~~--~p~~-r~~~~~~~~~~-~iyv~GG~~~~~~~~~v~~y--d~~~~~W 565 (712)
+|+.+..+ +.+.+||.. +++...+.. .+.. ...+.+..-++ .+|+.+..+ ..+..| +..+.++
T Consensus 154 l~v~~~~~-----~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~-----~~v~v~~~~~~~g~~ 223 (347)
T 3hfq_A 154 LAVIDLGS-----DKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELS-----SQIASLKYDTQTGAF 223 (347)
T ss_dssp EEEEETTT-----TEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTT-----TEEEEEEEETTTTEE
T ss_pred EEEEeCCC-----CEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCC-----CEEEEEEecCCCCce
Confidence 77765432 468888887 565554432 2211 11122222245 488875432 344444 5445666
Q ss_pred EEcC---CCCCC---ccceEEEEE--CC-EEEEEcccCCCceeeeEEEEECCC-CeEEEccCCC
Q psy14726 566 SQVP---DMYNP---RSNFAIEVI--DD-MIFAIGGFNGVTTIYHVECYDEKT-DEWYEATDMN 619 (712)
Q Consensus 566 ~~~~---~~p~~---r~~~~~~~~--~~-~i~v~GG~~~~~~~~~v~~yd~~~-~~W~~~~~~p 619 (712)
..+. ..+.. ......+.+ ++ .||+.+..+ +.+.+||... +++..+..++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~-----~~v~v~~~~~~g~~~~~~~~~ 282 (347)
T 3hfq_A 224 TQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGY-----NTLAVFAVTADGHLTLIQQIS 282 (347)
T ss_dssp EEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETT-----TEEEEEEECGGGCEEEEEEEE
T ss_pred EEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCC-----CEEEEEEECCCCcEEEeEEEe
Confidence 5442 22221 122233333 45 477765432 3577888753 3555554433
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.19 Score=51.34 Aligned_cols=180 Identities=14% Similarity=0.198 Sum_probs=95.6
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEE
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 426 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 426 (712)
+.+++.||.+ ..|..+|...+.|.............-.+++.. ++..++.|+.++ .+..+|..++.+..
T Consensus 28 g~~las~~~D-----~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~-----~v~iw~~~~~~~~~ 97 (345)
T 3fm0_A 28 GTLLASCGGD-----RRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA-----TTCIWKKNQDDFEC 97 (345)
T ss_dssp SSCEEEEETT-----SCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS-----CEEEEEECCC-EEE
T ss_pred CCEEEEEcCC-----CeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC-----cEEEEEccCCCeEE
Confidence 3456666643 357788888877753211111111222233333 667777887543 46778877776655
Q ss_pred eCCCCCCccee-EEEE-ECCeEEEEcccCCCCCCceeEEeecCCC-ceEEcccCCccccceeEEEE--CCEEEEEcccCC
Q psy14726 427 IAPMNFKRCYV-STAV-HHDVIYAMGGYNGQRRQNSVEKYNYTEN-QWSLIAPMNVERSDASATTL--QGKIYITGGFNG 501 (712)
Q Consensus 427 ~~~~~~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~-~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~ 501 (712)
+..+....... +++. .+++.++.|+.+ ..+..||..+. .+..+..+.........+.+ ++.+++.|+.++
T Consensus 98 ~~~~~~h~~~v~~v~~sp~~~~l~s~s~D-----~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~ 172 (345)
T 3fm0_A 98 VTTLEGHENEVKSVAWAPSGNLLATCSRD-----KSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDD 172 (345)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTS
T ss_pred EEEccCCCCCceEEEEeCCCCEEEEEECC-----CeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCC
Confidence 44333222222 2222 256777888754 45788887664 33333222211122222333 567777787664
Q ss_pred CCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--CCEEEEEcCCC
Q psy14726 502 HNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFN 547 (712)
Q Consensus 502 ~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~ 547 (712)
.+..||..++.|.....+.........+.+ ++..++.|+.+
T Consensus 173 -----~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D 215 (345)
T 3fm0_A 173 -----TVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDD 215 (345)
T ss_dssp -----CEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred -----cEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCC
Confidence 578888888888765444322222223333 56677777754
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=96.55 E-value=0.33 Score=48.65 Aligned_cols=214 Identities=11% Similarity=0.031 Sum_probs=110.4
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEE
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 426 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 426 (712)
+..++.|+. ...+..||..+++.......... ...-.+++.. ++..++.|+.+ ..+..||..+++...
T Consensus 109 ~~~l~~~~~-----d~~i~~~d~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~d-----g~v~~~d~~~~~~~~ 177 (337)
T 1gxr_A 109 GCTLIVGGE-----ASTLSIWDLAAPTPRIKAELTSS-APACYALAISPDSKVCFSCCSD-----GNIAVWDLHNQTLVR 177 (337)
T ss_dssp SSEEEEEES-----SSEEEEEECCCC--EEEEEEECS-SSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEE
T ss_pred CCEEEEEcC-----CCcEEEEECCCCCcceeeecccC-CCceEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCceee
Confidence 334555553 24688899888764332111111 1112233333 56677777754 358899998876543
Q ss_pred eCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCC
Q psy14726 427 IAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHN 503 (712)
Q Consensus 427 ~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~ 503 (712)
.-...... -.+++. .++..++.|+.+ ..+..||..+.+-...-..+. . ...+.+ +++.+++|+.++
T Consensus 178 ~~~~~~~~-i~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~~~~~~--~-v~~~~~s~~~~~l~~~~~~~-- 246 (337)
T 1gxr_A 178 QFQGHTDG-ASCIDISNDGTKLWTGGLD-----NTVRSWDLREGRQLQQHDFTS--Q-IFSLGYCPTGEWLAVGMESS-- 246 (337)
T ss_dssp EECCCSSC-EEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEEEECSS--C-EEEEEECTTSSEEEEEETTS--
T ss_pred eeecccCc-eEEEEECCCCCEEEEEecC-----CcEEEEECCCCceEeeecCCC--c-eEEEEECCCCCEEEEEcCCC--
Confidence 32222221 122232 256677777643 468999988775433222111 1 122222 567777776553
Q ss_pred ccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEE
Q psy14726 504 CLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEV 582 (712)
Q Consensus 504 ~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~ 582 (712)
.+..||..+..-........ .-.++... ++.+++.|+.+ ..+..||..+.+-...... ...-.+++.
T Consensus 247 ---~i~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d-----g~i~~~~~~~~~~~~~~~~--~~~v~~~~~ 314 (337)
T 1gxr_A 247 ---NVEVLHVNKPDKYQLHLHES--CVLSLKFAYCGKWFVSTGKD-----NLLNAWRTPYGASIFQSKE--SSSVLSCDI 314 (337)
T ss_dssp ---CEEEEETTSSCEEEECCCSS--CEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCEEEEEEC--SSCEEEEEE
T ss_pred ---cEEEEECCCCCeEEEcCCcc--ceeEEEECCCCCEEEEecCC-----CcEEEEECCCCeEEEEecC--CCcEEEEEE
Confidence 58889988776433322211 11222222 46666777653 5788999887764432211 111122222
Q ss_pred E-CCEEEEEcccCC
Q psy14726 583 I-DDMIFAIGGFNG 595 (712)
Q Consensus 583 ~-~~~i~v~GG~~~ 595 (712)
. ++..++.|+.++
T Consensus 315 s~~~~~l~~~~~dg 328 (337)
T 1gxr_A 315 SVDDKYIVTGSGDK 328 (337)
T ss_dssp CTTSCEEEEEETTS
T ss_pred CCCCCEEEEecCCC
Confidence 2 667777777665
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=96.48 E-value=0.49 Score=49.35 Aligned_cols=226 Identities=9% Similarity=0.015 Sum_probs=114.8
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEE-
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWK- 425 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~- 425 (712)
+..++.|+.+ ..+..||..++.-... .. .....-.+++.. ++.+++.|+.+ ..+..||..+.+-.
T Consensus 109 ~~~l~~~~~d-----g~i~iwd~~~~~~~~~--~~-~h~~~v~~~~~~~~~~~l~s~s~d-----~~i~iwd~~~~~~~~ 175 (420)
T 3vl1_A 109 MRRFILGTTE-----GDIKVLDSNFNLQREI--DQ-AHVSEITKLKFFPSGEALISSSQD-----MQLKIWSVKDGSNPR 175 (420)
T ss_dssp SCEEEEEETT-----SCEEEECTTSCEEEEE--TT-SSSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCCCE
T ss_pred CCEEEEEECC-----CCEEEEeCCCcceeee--cc-cccCccEEEEECCCCCEEEEEeCC-----CeEEEEeCCCCcCce
Confidence 3455666532 3578888887765442 11 111222333333 56677777753 36889998876421
Q ss_pred EeCCCCCCcceeEEEEE-CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCC-ccccceeEE----------------
Q psy14726 426 EIAPMNFKRCYVSTAVH-HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMN-VERSDASAT---------------- 487 (712)
Q Consensus 426 ~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p-~~r~~~~~~---------------- 487 (712)
.+.. ....-.+++.. ++..++.|+.+ ..+..||..+.+-...-..+ .........
T Consensus 176 ~~~~--h~~~v~~~~~~~~~~~l~s~~~d-----~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 248 (420)
T 3vl1_A 176 TLIG--HRATVTDIAIIDRGRNVLSASLD-----GTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTS 248 (420)
T ss_dssp EEEC--CSSCEEEEEEETTTTEEEEEETT-----SCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCC
T ss_pred EEcC--CCCcEEEEEEcCCCCEEEEEcCC-----CcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccC
Confidence 1111 11111223332 56677777754 35888888776532221111 011111111
Q ss_pred -------EECCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CCE-EEEEcCCCCCCccceEEEE
Q psy14726 488 -------TLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HEC-IYVIGGFNGMSRMCNGEKY 558 (712)
Q Consensus 488 -------~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~v~~y 558 (712)
.-+++.++.|+.++ .+..||..+.+-...-.......-.+++.. ++. +++.|+.+ ..+..|
T Consensus 249 ~v~~~~~s~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~d-----g~i~vw 318 (420)
T 3vl1_A 249 KKNNLEFGTYGKYVIAGHVSG-----VITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYEN-----GMLAQW 318 (420)
T ss_dssp CCCTTCSSCTTEEEEEEETTS-----CEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETT-----SEEEEE
T ss_pred cccceEEcCCCCEEEEEcCCC-----eEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCC-----CeEEEE
Confidence 12567777777654 588899887653222211111112222222 344 67777654 578899
Q ss_pred eCCCCcE--EEcCCCCCCccceEEEEECCEEEEEcccCCCceeeeEEEEECCC
Q psy14726 559 NPVTKTW--SQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKT 609 (712)
Q Consensus 559 d~~~~~W--~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~ 609 (712)
|..+.+- ..+... ....-.++...++.+++.||.++ .+.+||+..
T Consensus 319 d~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~l~s~~~d~-----~v~iw~~~~ 365 (420)
T 3vl1_A 319 DLRSPECPVGEFLIN-EGTPINNVYFAAGALFVSSGFDT-----SIKLDIISD 365 (420)
T ss_dssp ETTCTTSCSEEEEES-TTSCEEEEEEETTEEEEEETTTE-----EEEEEEECC
T ss_pred EcCCCcCchhhhhcc-CCCCceEEEeCCCCEEEEecCCc-----cEEEEeccC
Confidence 9877531 222110 11122233444888888888764 567777654
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=96.48 E-value=0.76 Score=45.26 Aligned_cols=231 Identities=9% Similarity=0.001 Sum_probs=119.6
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCc--EEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCc-
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADR--WVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKV- 423 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~--W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~- 423 (712)
+.+++.|.. ...+.++|+.+++ |.. ... .....+.+.+. ++.+++.+ .+.++.||+ +++
T Consensus 5 ~~~lv~~~~-----~~~v~~~d~~tG~~~w~~--~~~--~~~~~~~~~~~pdG~ilvs~-------~~~V~~~d~-~G~~ 67 (276)
T 3no2_A 5 QHLLVGGSG-----WNKIAIINKDTKEIVWEY--PLE--KGWECNSVAATKAGEILFSY-------SKGAKMITR-DGRE 67 (276)
T ss_dssp CEEEEECTT-----CSEEEEEETTTTEEEEEE--ECC--TTCCCCEEEECTTSCEEEEC-------BSEEEEECT-TSCE
T ss_pred CcEEEeeCC-----CCEEEEEECCCCeEEEEe--CCC--ccCCCcCeEECCCCCEEEeC-------CCCEEEECC-CCCE
Confidence 345555542 3568889987775 654 211 11123444444 77788733 246999999 554
Q ss_pred -EEEeCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCc-eEEcc--cC--CccccceeEEEECCEEEEE
Q psy14726 424 -WKEIAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQ-WSLIA--PM--NVERSDASATTLQGKIYIT 496 (712)
Q Consensus 424 -W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~--~~--p~~r~~~~~~~~~~~iyv~ 496 (712)
|+.-.+ .....+++.. .+|++++..+.. ...++.+|+..+. |+.-. .. +...........+|.+++.
T Consensus 68 ~W~~~~~--~~~~~~~~~~~~dG~~lv~~~~~----~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~ 141 (276)
T 3no2_A 68 LWNIAAP--AGCEMQTARILPDGNALVAWCGH----PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVP 141 (276)
T ss_dssp EEEEECC--TTCEEEEEEECTTSCEEEEEEST----TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEE
T ss_pred EEEEcCC--CCccccccEECCCCCEEEEecCC----CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEE
Confidence 664332 1122233333 467777764321 2468888885542 44321 11 1111222233336676665
Q ss_pred cccCCCCccCceEEeeCCCCe--eEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCC--cEEEcC-CC
Q psy14726 497 GGFNGHNCLNSCEVYDPECNQ--WTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTK--TWSQVP-DM 571 (712)
Q Consensus 497 GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~-~~ 571 (712)
...+ ..|.+||++ ++ |+.-.+. .+ ..+....++.+++.+..+ ..+..+|+++. .|+.-. ..
T Consensus 142 ~~~~-----~~v~~~d~~-G~~~w~~~~~~-~~--~~~~~~~~g~~~v~~~~~-----~~v~~~d~~tG~~~w~~~~~~~ 207 (276)
T 3no2_A 142 LFAT-----SEVREIAPN-GQLLNSVKLSG-TP--FSSAFLDNGDCLVACGDA-----HCFVQLNLESNRIVRRVNANDI 207 (276)
T ss_dssp ETTT-----TEEEEECTT-SCEEEEEECSS-CC--CEEEECTTSCEEEECBTT-----SEEEEECTTTCCEEEEEEGGGS
T ss_pred ecCC-----CEEEEECCC-CCEEEEEECCC-Cc--cceeEcCCCCEEEEeCCC-----CeEEEEeCcCCcEEEEecCCCC
Confidence 5422 468999987 44 7665431 11 122333367888877642 46999999965 477642 22
Q ss_pred CCCcc--ceEEEEE-CCEEEEEc--ccCCCc---eeeeEEEEECCCC-eEEEc
Q psy14726 572 YNPRS--NFAIEVI-DDMIFAIG--GFNGVT---TIYHVECYDEKTD-EWYEA 615 (712)
Q Consensus 572 p~~r~--~~~~~~~-~~~i~v~G--G~~~~~---~~~~v~~yd~~~~-~W~~~ 615 (712)
+..+. -.+++.. ++.+|+.. |..... ....+..+|++.+ .|+.-
T Consensus 208 ~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~~~ 260 (276)
T 3no2_A 208 EGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQLN 260 (276)
T ss_dssp BSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEEEEEC
T ss_pred CCccccccccceEcCCCCEEEEeccCccccccccCCceEEEECCCCCEEEEec
Confidence 22222 1233333 88888876 543200 1123555665443 46544
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=96.47 E-value=0.45 Score=48.32 Aligned_cols=186 Identities=15% Similarity=0.185 Sum_probs=96.1
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEE-EECCeEEEEcccCCCCCCceeEEeecCCCc--eE
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTA-VHHDVIYAMGGYNGQRRQNSVEKYNYTENQ--WS 472 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~ 472 (712)
++.+++.||.+ ..+..+|..+.+-...-+..... -.+++ ..++..++.||.+ ..+..||..+.. ..
T Consensus 66 d~~~l~s~s~D-----g~v~iWd~~~~~~~~~~~~~~~~-v~~~~~s~~~~~l~s~~~d-----~~v~iw~~~~~~~~~~ 134 (340)
T 1got_B 66 DSRLLLSASQD-----GKLIIWDSYTTNKVHAIPLRSSW-VMTCAYAPSGNYVACGGLD-----NICSIYNLKTREGNVR 134 (340)
T ss_dssp TSSEEEEEETT-----TEEEEEETTTCCEEEEEECSSSC-EEEEEECTTSSEEEEEETT-----CEEEEEETTTCSBSCE
T ss_pred CCCEEEEEeCC-----CcEEEEECCCCCcceEeecCCcc-EEEEEECCCCCEEEEEeCC-----CeEEEEECccCCCcce
Confidence 45566667654 35788888776543222222111 12222 2356777778754 467888876643 12
Q ss_pred EcccCCccccceeEE--EECCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--CCEEEEEcCCCC
Q psy14726 473 LIAPMNVERSDASAT--TLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNG 548 (712)
Q Consensus 473 ~~~~~p~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~ 548 (712)
....+........++ .-++. ++.|+.+ ..+..||..+++-... +.........+.+ ++.+++.|+.+
T Consensus 135 ~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d-----~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~sg~~d- 205 (340)
T 1got_B 135 VSRELAGHTGYLSCCRFLDDNQ-IVTSSGD-----TTCALWDIETGQQTTT--FTGHTGDVMSLSLAPDTRLFVSGACD- 205 (340)
T ss_dssp EEEEEECCSSCEEEEEEEETTE-EEEEETT-----SCEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-
T ss_pred eEEEecCCCccEEEEEECCCCc-EEEEECC-----CcEEEEECCCCcEEEE--EcCCCCceEEEEECCCCCEEEEEeCC-
Confidence 111111111111112 22556 4555544 3588899888764332 1111111222222 56778888764
Q ss_pred CCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCeE
Q psy14726 549 MSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEW 612 (712)
Q Consensus 549 ~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 612 (712)
..+..||..+..-...- .........+.+ ++..++.|+.++ .+.+||..+++-
T Consensus 206 ----~~v~~wd~~~~~~~~~~--~~h~~~v~~v~~~p~~~~l~s~s~d~-----~v~iwd~~~~~~ 260 (340)
T 1got_B 206 ----ASAKLWDVREGMCRQTF--TGHESDINAICFFPNGNAFATGSDDA-----TCRLFDLRADQE 260 (340)
T ss_dssp ----SCEEEEETTTCSEEEEE--CCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEE
T ss_pred ----CcEEEEECCCCeeEEEE--cCCcCCEEEEEEcCCCCEEEEEcCCC-----cEEEEECCCCcE
Confidence 46788998776433221 111111222222 677888888765 578889887654
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=96.47 E-value=0.62 Score=52.77 Aligned_cols=248 Identities=7% Similarity=0.002 Sum_probs=131.4
Q ss_pred CCCceEEEEECCCCcEEEcccCC-CCC-CCcceEEEEE--CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcc
Q psy14726 360 SPTDFVETYDTRADRWVKIEQVD-PMG-PRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRC 435 (712)
Q Consensus 360 ~~~~~v~~~d~~~~~W~~~~~~~-~~~-~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~ 435 (712)
.....++..+...+.|..+.... +.. .........+ +++.++++...++.....++.+|..+++......++....
T Consensus 91 ~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~ 170 (695)
T 2bkl_A 91 KEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKY 170 (695)
T ss_dssp CSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTT
T ss_pred CeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccc
Confidence 34556778887777777653211 110 1111222222 6666666554333344689999999988641112222221
Q ss_pred eeEEEEECCeEEEEcccCCC--------CCCceeEEeecCCCce--EEcccCCccccceeEEEE--CCEEEEEcccCCCC
Q psy14726 436 YVSTAVHHDVIYAMGGYNGQ--------RRQNSVEKYNYTENQW--SLIAPMNVERSDASATTL--QGKIYITGGFNGHN 503 (712)
Q Consensus 436 ~~~~~~~~~~iyv~GG~~~~--------~~~~~v~~yd~~~~~W--~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~ 503 (712)
......-+|+.++++..... .....+++++..+..- ..+...+..........+ +|+..+++...+.
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~- 249 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGW- 249 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETT-
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCC-
Confidence 22223346676666654322 2345699999887763 233222222112222233 5654444443321
Q ss_pred ccCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCc---EEEcCCCCCCccceEE
Q psy14726 504 CLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKT---WSQVPDMYNPRSNFAI 580 (712)
Q Consensus 504 ~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~---W~~~~~~p~~r~~~~~ 580 (712)
..+.++.+|..+..|..+..-.... ...+..++.+|+....+ .....++.+|..+.. |+.+-.......-.++
T Consensus 250 ~~~~l~~~~~~~~~~~~l~~~~~~~--~~~~~~~g~l~~~s~~~--~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~ 325 (695)
T 2bkl_A 250 SENDVYWKRPGEKDFRLLVKGVGAK--YEVHAWKDRFYVLTDEG--APRQRVFEVDPAKPARASWKEIVPEDSSASLLSV 325 (695)
T ss_dssp TEEEEEEECTTCSSCEEEEECSSCC--EEEEEETTEEEEEECTT--CTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEE
T ss_pred CceEEEEEcCCCCceEEeecCCCce--EEEEecCCcEEEEECCC--CCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEE
Confidence 2457888888777888876432222 22233566666664432 224689999987654 8877432212222334
Q ss_pred EEECCEEEEEcccCCCceeeeEEEEECCCCeEEEc
Q psy14726 581 EVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 581 ~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
+..++.+++.+..++ ...++++|+..+.-..+
T Consensus 326 ~~~~~~lv~~~~~dg---~~~l~~~~~~g~~~~~l 357 (695)
T 2bkl_A 326 SIVGGHLSLEYLKDA---TSEVRVATLKGKPVRTV 357 (695)
T ss_dssp EEETTEEEEEEEETT---EEEEEEEETTCCEEEEC
T ss_pred EEECCEEEEEEEECC---EEEEEEEeCCCCeeEEe
Confidence 445889888876654 34688888765544443
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=96.47 E-value=0.34 Score=49.68 Aligned_cols=226 Identities=12% Similarity=0.119 Sum_probs=112.1
Q ss_pred eEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEe
Q psy14726 349 ILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEI 427 (712)
Q Consensus 349 ~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 427 (712)
..++.||.+ ..+..+|..+...... ...+.. .-.+++.. ++..++.||.+ ..+..|+.....-...
T Consensus 77 ~~l~s~s~D-----g~v~vWd~~~~~~~~~--~~~~~~-~v~~~~~sp~g~~lasg~~d-----~~i~v~~~~~~~~~~~ 143 (354)
T 2pbi_B 77 RRIVSSSQD-----GKVIVWDSFTTNKEHA--VTMPCT-WVMACAYAPSGCAIACGGLD-----NKCSVYPLTFDKNENM 143 (354)
T ss_dssp SEEEEEETT-----SEEEEEETTTCCEEEE--EECSSS-CCCEEEECTTSSEEEEESTT-----SEEEEEECCCCTTCCS
T ss_pred CEEEEEeCC-----CeEEEEECCCCCcceE--EecCCC-CEEEEEECCCCCEEEEeeCC-----CCEEEEEEeccccccc
Confidence 455566532 3577788766654431 111111 11223333 66777788754 3466676543320000
Q ss_pred CC----CCCCcce-eEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE----CCEEEEEc
Q psy14726 428 AP----MNFKRCY-VSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL----QGKIYITG 497 (712)
Q Consensus 428 ~~----~~~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~----~~~iyv~G 497 (712)
.. +...... .+++. .++..++.|+.+ ..+..||+.+.+.... +........+..+ ++..++.|
T Consensus 144 ~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D-----~~v~lwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~g~~l~sg 216 (354)
T 2pbi_B 144 AAKKKSVAMHTNYLSACSFTNSDMQILTASGD-----GTCALWDVESGQLLQS--FHGHGADVLCLDLAPSETGNTFVSG 216 (354)
T ss_dssp GGGCEEEEECSSCEEEEEECSSSSEEEEEETT-----SEEEEEETTTCCEEEE--EECCSSCEEEEEECCCSSCCEEEEE
T ss_pred cccceeeeccCCcEEEEEEeCCCCEEEEEeCC-----CcEEEEeCCCCeEEEE--EcCCCCCeEEEEEEeCCCCCEEEEE
Confidence 00 0000011 12222 234455555533 4688899888764322 1100111112222 35778888
Q ss_pred ccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCc
Q psy14726 498 GFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPR 575 (712)
Q Consensus 498 G~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r 575 (712)
|.++ .+..||..+.+....- ........++.+ ++..++.|+.+ ..+..||..+..-...-......
T Consensus 217 s~Dg-----~v~~wd~~~~~~~~~~--~~h~~~v~~v~~~p~~~~l~s~s~D-----~~v~lwd~~~~~~~~~~~~~~~~ 284 (354)
T 2pbi_B 217 GCDK-----KAMVWDMRSGQCVQAF--ETHESDVNSVRYYPSGDAFASGSDD-----ATCRLYDLRADREVAIYSKESII 284 (354)
T ss_dssp ETTS-----CEEEEETTTCCEEEEE--CCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEEECCTTCC
T ss_pred eCCC-----eEEEEECCCCcEEEEe--cCCCCCeEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCcEEEEEcCCCcc
Confidence 7764 5888998887653321 111112222333 56677777764 46788998876433221111112
Q ss_pred cceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 576 SNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 576 ~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
.....+.+ ++.+++.|+.++ .+.+||..+++
T Consensus 285 ~~~~~~~~s~~g~~l~~g~~d~-----~i~vwd~~~~~ 317 (354)
T 2pbi_B 285 FGASSVDFSLSGRLLFAGYNDY-----TINVWDVLKGS 317 (354)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCS
T ss_pred cceeEEEEeCCCCEEEEEECCC-----cEEEEECCCCc
Confidence 22333333 677888887654 57888986654
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.45 E-value=0.3 Score=49.70 Aligned_cols=235 Identities=10% Similarity=0.045 Sum_probs=114.7
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEE
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 426 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 426 (712)
+..++.|+.+ ..+..||..+++-... .... ...-.+++.. ++..++.|+.+ ..+..||..+++...
T Consensus 44 ~~~l~~~~~d-----g~i~vwd~~~~~~~~~--~~~h-~~~v~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~ 110 (369)
T 3zwl_B 44 GDLLFSCSKD-----SSASVWYSLNGERLGT--LDGH-TGTIWSIDVDCFTKYCVTGSAD-----YSIKLWDVSNGQCVA 110 (369)
T ss_dssp SCEEEEEESS-----SCEEEEETTTCCEEEE--ECCC-SSCEEEEEECTTSSEEEEEETT-----TEEEEEETTTCCEEE
T ss_pred CCEEEEEeCC-----CEEEEEeCCCchhhhh--hhhc-CCcEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCcEEE
Confidence 3455555532 3577888877665432 1111 1112233333 56677777753 468999998877544
Q ss_pred eCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCc----eEEcccCC-----ccc--cceeEEEE--CCE
Q psy14726 427 IAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQ----WSLIAPMN-----VER--SDASATTL--QGK 492 (712)
Q Consensus 427 ~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~----W~~~~~~p-----~~r--~~~~~~~~--~~~ 492 (712)
.-..+. .-.+++. .++..++.|+.+.......+..||..+.. +......+ ... ....++.+ +++
T Consensus 111 ~~~~~~--~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (369)
T 3zwl_B 111 TWKSPV--PVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGK 188 (369)
T ss_dssp EEECSS--CEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGC
T ss_pred EeecCC--CeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCC
Confidence 333221 1222222 35566666654422233567778766543 22111111 000 12222333 566
Q ss_pred EEEEcccCCCCccCceEEeeCCC-CeeEEeCCCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcC
Q psy14726 493 IYITGGFNGHNCLNSCEVYDPEC-NQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVP 569 (712)
Q Consensus 493 iyv~GG~~~~~~~~~v~~yd~~~-~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 569 (712)
.++.|+.+ ..+..||..+ ..-... +.........+.+ ++..++.|+.+ ..+..||..+.+....-
T Consensus 189 ~l~~~~~d-----g~i~i~d~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~~~~ 256 (369)
T 3zwl_B 189 YIIAGHKD-----GKISKYDVSNNYEYVDS--IDLHEKSISDMQFSPDLTYFITSSRD-----TNSFLVDVSTLQVLKKY 256 (369)
T ss_dssp EEEEEETT-----SEEEEEETTTTTEEEEE--EECCSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCEEEEE
T ss_pred EEEEEcCC-----CEEEEEECCCCcEeEEE--EecCCCceeEEEECCCCCEEEEecCC-----ceEEEEECCCCceeeee
Confidence 77777655 3688999887 332211 1111122222222 56666666643 47889998876544332
Q ss_pred CCCCCccceEEEEE-CCEEEEEcccCCCc---------eeeeEEEEECCCCe
Q psy14726 570 DMYNPRSNFAIEVI-DDMIFAIGGFNGVT---------TIYHVECYDEKTDE 611 (712)
Q Consensus 570 ~~p~~r~~~~~~~~-~~~i~v~GG~~~~~---------~~~~v~~yd~~~~~ 611 (712)
... .....++.. ++..+++|+.++.. ....+.+||..+.+
T Consensus 257 ~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 306 (369)
T 3zwl_B 257 ETD--CPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEE 306 (369)
T ss_dssp ECS--SCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCC
T ss_pred cCC--CCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCc
Confidence 211 111222222 55666666654421 11257888877654
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.43 E-value=0.069 Score=54.74 Aligned_cols=180 Identities=9% Similarity=0.144 Sum_probs=99.4
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCC--CcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceE
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNF--KRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWS 472 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~--~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 472 (712)
++.+++.||.+ ..+..+|..+++|.....+.. ...-.+++. .+++.++.|+.+ ..+..||..+..+.
T Consensus 27 ~g~~las~~~D-----~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D-----~~v~iw~~~~~~~~ 96 (345)
T 3fm0_A 27 AGTLLASCGGD-----RRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFD-----ATTCIWKKNQDDFE 96 (345)
T ss_dssp TSSCEEEEETT-----SCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETT-----SCEEEEEECCC-EE
T ss_pred CCCEEEEEcCC-----CeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECC-----CcEEEEEccCCCeE
Confidence 56677777754 357888888888754322211 111122332 357777888754 35778888777766
Q ss_pred EcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCe-eEEeCCCCCCCcceEEEEE--CCEEEEEcCCC
Q psy14726 473 LIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQ-WTLIEPMRHRRSGVSCIAY--HECIYVIGGFN 547 (712)
Q Consensus 473 ~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~ 547 (712)
.+..+..-.....++.+ ++++++.|+.++ .+..||..+.. +..+..+.........+.. ++.+++.|+.+
T Consensus 97 ~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~-----~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d 171 (345)
T 3fm0_A 97 CVTTLEGHENEVKSVAWAPSGNLLATCSRDK-----SVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYD 171 (345)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETT
T ss_pred EEEEccCCCCCceEEEEeCCCCEEEEEECCC-----eEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCC
Confidence 55443322222233333 677888887664 57777776542 3333322211122222222 56677777764
Q ss_pred CCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE--CCEEEEEcccCC
Q psy14726 548 GMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNG 595 (712)
Q Consensus 548 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~ 595 (712)
..+..||..+..|..+..+.........+.+ ++..++.|+.++
T Consensus 172 -----~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~ 216 (345)
T 3fm0_A 172 -----DTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDR 216 (345)
T ss_dssp -----SCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred -----CcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCC
Confidence 4677888888888755433322222222333 677788888765
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=96.41 E-value=0.25 Score=49.94 Aligned_cols=152 Identities=13% Similarity=0.118 Sum_probs=76.6
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-C-CEEEEEeecCCCCccceEEEEECCCCcEE
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-G-YNIYVIGGFDGNEYYNSCRCFNAVTKVWK 425 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~-~~lyv~GG~~~~~~~~~v~~yd~~~~~W~ 425 (712)
+.+++.++. ...+..+|+.+++.... ...+.....+.+++. + +.+|+.++. ...++.||+.+++..
T Consensus 11 ~~~~v~~~~-----~~~v~~~d~~~~~~~~~--~~~~~~~~~~~~~~s~dg~~~~v~~~~-----~~~i~~~d~~t~~~~ 78 (349)
T 1jmx_B 11 HEYMIVTNY-----PNNLHVVDVASDTVYKS--CVMPDKFGPGTAMMAPDNRTAYVLNNH-----YGDIYGIDLDTCKNT 78 (349)
T ss_dssp CEEEEEEET-----TTEEEEEETTTTEEEEE--EECSSCCSSCEEEECTTSSEEEEEETT-----TTEEEEEETTTTEEE
T ss_pred CEEEEEeCC-----CCeEEEEECCCCcEEEE--EecCCCCCCceeEECCCCCEEEEEeCC-----CCcEEEEeCCCCcEE
Confidence 456666653 35788999988876542 111110012344444 3 457777642 246999999988765
Q ss_pred EeCCCCC-----CcceeEEEE-ECC-eEEEEcccC---CC---CCCceeEEeecCCCceEE-cccCCccccceeEEE-EC
Q psy14726 426 EIAPMNF-----KRCYVSTAV-HHD-VIYAMGGYN---GQ---RRQNSVEKYNYTENQWSL-IAPMNVERSDASATT-LQ 490 (712)
Q Consensus 426 ~~~~~~~-----~r~~~~~~~-~~~-~iyv~GG~~---~~---~~~~~v~~yd~~~~~W~~-~~~~p~~r~~~~~~~-~~ 490 (712)
..-..+. ...-..++. -+| .+|+.+... .. .....+.+||+.+++-.. +...+.++.-.+++. -+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~d 158 (349)
T 1jmx_B 79 FHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADD 158 (349)
T ss_dssp EEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTT
T ss_pred EEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCC
Confidence 3322221 111123333 245 455543210 00 012579999988743211 111122222222222 26
Q ss_pred CEEEEEcccCCCCccCceEEeeCCCCeeE
Q psy14726 491 GKIYITGGFNGHNCLNSCEVYDPECNQWT 519 (712)
Q Consensus 491 ~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 519 (712)
+++|+.++ ++.++|+.+.+-.
T Consensus 159 g~l~~~~~--------~i~~~d~~~~~~~ 179 (349)
T 1jmx_B 159 GSLYVAGP--------DIYKMDVKTGKYT 179 (349)
T ss_dssp SCEEEESS--------SEEEECTTTCCEE
T ss_pred CcEEEccC--------cEEEEeCCCCcee
Confidence 67887542 3888888776643
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=96.39 E-value=1.6 Score=48.02 Aligned_cols=121 Identities=12% Similarity=0.122 Sum_probs=67.3
Q ss_pred CcCCCceEEEEeecCCCCCCceEEEEEC-CCC--cEEEcccCCCC-C--C---CcceEEEEECCEEEEEeecCCCCccce
Q psy14726 343 PRVPHEILFAIGGWSGGSPTDFVETYDT-RAD--RWVKIEQVDPM-G--P---RAYHGTAVIGYNIYVIGGFDGNEYYNS 413 (712)
Q Consensus 343 pr~~~~~i~~~GG~~~~~~~~~v~~~d~-~~~--~W~~~~~~~~~-~--~---r~~~~~~~~~~~lyv~GG~~~~~~~~~ 413 (712)
|-...+.||+.... ...++++|. .++ .|..-...... . . ....+.++.++.||+... ...
T Consensus 58 P~v~~g~vyv~~~~-----~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------dg~ 126 (571)
T 2ad6_A 58 PLVIGDMMYVHSAF-----PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA------NGH 126 (571)
T ss_dssp CEEETTEEEEECST-----TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT------TSE
T ss_pred cEEECCEEEEEeCC-----CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC------CCE
Confidence 43445666665431 246899998 665 48762111100 0 0 112345566889988743 246
Q ss_pred EEEEECCCCc--EEEeCCCC-CC-cceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCc--eEEc
Q psy14726 414 CRCFNAVTKV--WKEIAPMN-FK-RCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQ--WSLI 474 (712)
Q Consensus 414 v~~yd~~~~~--W~~~~~~~-~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~ 474 (712)
++.+|..+++ |+.-..-+ .. ....+-++.+++||+..+..+......++.||+.+.+ |+.-
T Consensus 127 l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 127 LLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp EEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred EEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEc
Confidence 9999999885 86432211 10 1122334568899886542211223579999998764 8643
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=96.38 E-value=0.076 Score=53.68 Aligned_cols=232 Identities=7% Similarity=0.013 Sum_probs=116.9
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CC-EEEEEeecCCCCccceEEEEECCCCcE-
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GY-NIYVIGGFDGNEYYNSCRCFNAVTKVW- 424 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~v~~yd~~~~~W- 424 (712)
+.+++.++. ...+..+|+.+++....... + ....++++. ++ .+|+.+..+ ..++.+|+.+++.
T Consensus 10 ~~~~v~~~~-----~~~v~~~d~~~~~~~~~~~~--~--~~~~~~~~s~dg~~l~~~~~~~-----~~i~~~d~~~~~~~ 75 (331)
T 3u4y_A 10 NFGIVVEQH-----LRRISFFSTDTLEILNQITL--G--YDFVDTAITSDCSNVVVTSDFC-----QTLVQIETQLEPPK 75 (331)
T ss_dssp CEEEEEEGG-----GTEEEEEETTTCCEEEEEEC--C--CCEEEEEECSSSCEEEEEESTT-----CEEEEEECSSSSCE
T ss_pred CEEEEEecC-----CCeEEEEeCcccceeeeEEc--c--CCcceEEEcCCCCEEEEEeCCC-----CeEEEEECCCCcee
Confidence 456665542 24788999998887653221 1 112234433 44 577766522 3799999998874
Q ss_pred -EEeCCCCCCcceeEEEE-ECC-eEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE-CC-EEEEEccc
Q psy14726 425 -KEIAPMNFKRCYVSTAV-HHD-VIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL-QG-KIYITGGF 499 (712)
Q Consensus 425 -~~~~~~~~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~ 499 (712)
..+..-..++ ++++. -++ .+| .+... .....+.+||+.+.+....- +.....+.++.- +| .+|+.+..
T Consensus 76 ~~~~~~~~~~~--~~~~~s~dg~~l~-~~~~~--~~~~~i~v~d~~~~~~~~~~--~~~~~~~~~~~spdg~~l~~~~~~ 148 (331)
T 3u4y_A 76 VVAIQEGQSSM--ADVDITPDDQFAV-TVTGL--NHPFNMQSYSFLKNKFISTI--PIPYDAVGIAISPNGNGLILIDRS 148 (331)
T ss_dssp EEEEEECSSCC--CCEEECTTSSEEE-ECCCS--SSSCEEEEEETTTTEEEEEE--ECCTTEEEEEECTTSSCEEEEEET
T ss_pred EEecccCCCCc--cceEECCCCCEEE-EecCC--CCcccEEEEECCCCCeEEEE--ECCCCccceEECCCCCEEEEEecC
Confidence 2222222222 21233 334 566 33221 11237999999888754432 222222333333 44 48877653
Q ss_pred CCCCccCc-eEEeeCCCCe--eEE-eCCCCCCCcceEEEEE-CC-EEEEEcCCCCCCccceEEEEeCCCCcE-EEcCCCC
Q psy14726 500 NGHNCLNS-CEVYDPECNQ--WTL-IEPMRHRRSGVSCIAY-HE-CIYVIGGFNGMSRMCNGEKYNPVTKTW-SQVPDMY 572 (712)
Q Consensus 500 ~~~~~~~~-v~~yd~~~~~--W~~-~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W-~~~~~~p 572 (712)
+ .. +..|+...+. ... ...++....-..++.. ++ .+|+.+.. ...+.+||+.+.+. ..+..++
T Consensus 149 ~-----~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~-----~~~v~v~d~~~~~~~~~~~~~~ 218 (331)
T 3u4y_A 149 S-----ANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLI-----GNSIGILETQNPENITLLNAVG 218 (331)
T ss_dssp T-----TTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETT-----TTEEEEEECSSTTSCEEEEEEE
T ss_pred C-----CceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCC-----CCeEEEEECCCCcccceeeecc
Confidence 3 24 6666654322 111 0111211122223322 44 58887643 25789999987764 1111112
Q ss_pred CCccceEEEEE-CCE-EEEEcccCCCceeeeEEEEECCCCeEEEc
Q psy14726 573 NPRSNFAIEVI-DDM-IFAIGGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 573 ~~r~~~~~~~~-~~~-i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
......+++.. +++ +|+..+. .+.+.+||+++++...+
T Consensus 219 ~~~~~~~~~~spdg~~l~v~~~~-----~~~i~~~d~~~~~~~~~ 258 (331)
T 3u4y_A 219 TNNLPGTIVVSRDGSTVYVLTES-----TVDVFNFNQLSGTLSFV 258 (331)
T ss_dssp CSSCCCCEEECTTSSEEEEECSS-----EEEEEEEETTTTEEEEE
T ss_pred CCCCCceEEECCCCCEEEEEEcC-----CCEEEEEECCCCceeee
Confidence 22222233333 444 6666442 23589999999887554
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=96.36 E-value=0.46 Score=53.34 Aligned_cols=241 Identities=9% Similarity=-0.001 Sum_probs=127.8
Q ss_pred ceEEEEECC--C-CcEEEcccCCCC-CCCcceEEEEE-CCEEEEEeecCC-----CCccceEEEEECCC------CcEEE
Q psy14726 363 DFVETYDTR--A-DRWVKIEQVDPM-GPRAYHGTAVI-GYNIYVIGGFDG-----NEYYNSCRCFNAVT------KVWKE 426 (712)
Q Consensus 363 ~~v~~~d~~--~-~~W~~~~~~~~~-~~r~~~~~~~~-~~~lyv~GG~~~-----~~~~~~v~~yd~~~------~~W~~ 426 (712)
..++.++.. . +....+...+.. ........+.. +++.++++..+. .....+++.+|..+ ++...
T Consensus 102 ~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 181 (662)
T 3azo_A 102 QRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRE 181 (662)
T ss_dssp CCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEE
T ss_pred CeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeE
Confidence 457778776 3 554543221100 11112233333 554444444321 12336799999988 67666
Q ss_pred eC-CCCCCcceeEEEEECCeEEEEcccCCCC---CCceeEEeecC-CCceEEcccCCcc-ccceeEEEE--CCEEEEEcc
Q psy14726 427 IA-PMNFKRCYVSTAVHHDVIYAMGGYNGQR---RQNSVEKYNYT-ENQWSLIAPMNVE-RSDASATTL--QGKIYITGG 498 (712)
Q Consensus 427 ~~-~~~~~r~~~~~~~~~~~iyv~GG~~~~~---~~~~v~~yd~~-~~~W~~~~~~p~~-r~~~~~~~~--~~~iyv~GG 498 (712)
+. .-+ .........-+|+..++....... ...+++++|.. +.++.....+... ......... +|++|+.+.
T Consensus 182 l~~~~~-~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~ 260 (662)
T 3azo_A 182 LSDDAH-RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATD 260 (662)
T ss_dssp SSCSCS-SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEEC
T ss_pred EEecCC-CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEEC
Confidence 55 322 111112233466655554433211 23579999998 5633322222211 112222222 677887776
Q ss_pred cCCCCccCceEEeeCCCCeeEEeCCCCCCC----c---ceEEEEE-CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCC
Q psy14726 499 FNGHNCLNSCEVYDPECNQWTLIEPMRHRR----S---GVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPD 570 (712)
Q Consensus 499 ~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r----~---~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 570 (712)
.++ ...++.+|+.+++|+.+.+..... . ....+.. ++++++.+.. ....++.+|..+.+...+..
T Consensus 261 ~~~---~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~d~~~~~~~~l~~ 333 (662)
T 3azo_A 261 RTG---WWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK----GAAVLGILDPESGELVDAAG 333 (662)
T ss_dssp TTS---SCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS----SSCEEEEEETTTTEEEECCS
T ss_pred CCC---CeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc----CccEEEEEECCCCcEEEecC
Confidence 543 247999999899998875432111 0 1122333 6777777653 24678888998888877743
Q ss_pred CCCCccceEE-EEECCEEEEEcccCCCceeeeEEEEECCCCeEEEc
Q psy14726 571 MYNPRSNFAI-EVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 571 ~p~~r~~~~~-~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
.. .....+ ..-++.+++..+... ....++.+|+.+++...+
T Consensus 334 ~~--~~~~~~~s~~~~~~~~~~~~~~--~~~~i~~~d~~~g~~~~l 375 (662)
T 3azo_A 334 PW--TEWAATLTVSGTRAVGVAASPR--TAYEVVELDTVTGRARTI 375 (662)
T ss_dssp SC--CEEEEEEEEETTEEEEEEEETT--EEEEEEEEETTTCCEEEE
T ss_pred CC--CeEEEEEecCCCEEEEEEcCCC--CCCEEEEEECCCCceEEe
Confidence 21 111223 334667776654332 234789999998888766
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=96.31 E-value=0.43 Score=52.85 Aligned_cols=121 Identities=14% Similarity=0.185 Sum_probs=72.3
Q ss_pred EEEEECCEEEEEeecCCCCccceEEEEEC-CCCc--EEEeCCCCC-----Ccc---eeEEEE--ECCe----EEEEcccC
Q psy14726 391 GTAVIGYNIYVIGGFDGNEYYNSCRCFNA-VTKV--WKEIAPMNF-----KRC---YVSTAV--HHDV----IYAMGGYN 453 (712)
Q Consensus 391 ~~~~~~~~lyv~GG~~~~~~~~~v~~yd~-~~~~--W~~~~~~~~-----~r~---~~~~~~--~~~~----iyv~GG~~ 453 (712)
+-++.++.||+.+.. ...++++|. .+++ |+.-...+. .++ ..+.++ .+++ ||+...
T Consensus 57 tP~v~~g~vyv~~~~-----~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~-- 129 (599)
T 1w6s_A 57 APLVVDGKMYIHTSF-----PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL-- 129 (599)
T ss_dssp CCEEETTEEEEECST-----TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT--
T ss_pred ccEEECCEEEEEeCC-----CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC--
Confidence 345569999998652 246899999 7775 876543321 111 223455 6777 888643
Q ss_pred CCCCCceeEEeecCCCc--eEEcccCCcc--ccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCe--eEEeC
Q psy14726 454 GQRRQNSVEKYNYTENQ--WSLIAPMNVE--RSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQ--WTLIE 522 (712)
Q Consensus 454 ~~~~~~~v~~yd~~~~~--W~~~~~~p~~--r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~ 522 (712)
...++.+|..|.+ |+.-..-+.. ....+-++.+++||+-++.........+..||.+|++ |+.-.
T Consensus 130 ----dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 130 ----DGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp ----TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred ----CCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcC
Confidence 2468999988765 8753221111 1122335568988874432111123579999998876 87664
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.30 E-value=0.32 Score=50.59 Aligned_cols=224 Identities=11% Similarity=0.016 Sum_probs=110.8
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEE
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 426 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 426 (712)
+..++.|+.+ ..+..||........+.. ....-.+++.. ++..++.|+.+ ..+..||..+++...
T Consensus 120 ~~~l~~~~~d-----g~i~i~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~ 185 (425)
T 1r5m_A 120 GNSIVTGVEN-----GELRLWNKTGALLNVLNF----HRAPIVSVKWNKDGTHIISMDVE-----NVTILWNVISGTVMQ 185 (425)
T ss_dssp SSEEEEEETT-----SCEEEEETTSCEEEEECC----CCSCEEEEEECTTSSEEEEEETT-----CCEEEEETTTTEEEE
T ss_pred CCEEEEEeCC-----CeEEEEeCCCCeeeeccC----CCccEEEEEECCCCCEEEEEecC-----CeEEEEECCCCcEEE
Confidence 3455566532 357778854444333211 11222233333 55666677643 358889988877544
Q ss_pred eCCCCCCc--------------ceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccce-eEEEE-C
Q psy14726 427 IAPMNFKR--------------CYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDA-SATTL-Q 490 (712)
Q Consensus 427 ~~~~~~~r--------------~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~-~~~~~-~ 490 (712)
.-..+... .-.+++...+..+++|+.+ ..+..||..+.+-... +....... +++.. +
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----g~i~~~d~~~~~~~~~--~~~~~~~i~~~~~~~~ 258 (425)
T 1r5m_A 186 HFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPK-----GAIFVYQITEKTPTGK--LIGHHGPISVLEFNDT 258 (425)
T ss_dssp EECCC---------------CCCBSCCEEEETTEEEEECGG-----GCEEEEETTCSSCSEE--ECCCSSCEEEEEEETT
T ss_pred EeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCC-----CeEEEEEcCCCceeee--eccCCCceEEEEECCC
Confidence 32222111 0222333334445666643 4688999887643211 11111111 22222 5
Q ss_pred CEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcC
Q psy14726 491 GKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVP 569 (712)
Q Consensus 491 ~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 569 (712)
++.++.|+.++ .+..||..+.+....-.. ....-.+++.. ++ +++.|+.+ ..+..||..+.+-...-
T Consensus 259 ~~~l~~~~~d~-----~i~i~d~~~~~~~~~~~~-~~~~i~~~~~~~~~-~l~~~~~d-----~~i~i~d~~~~~~~~~~ 326 (425)
T 1r5m_A 259 NKLLLSASDDG-----TLRIWHGGNGNSQNCFYG-HSQSIVSASWVGDD-KVISCSMD-----GSVRLWSLKQNTLLALS 326 (425)
T ss_dssp TTEEEEEETTS-----CEEEECSSSBSCSEEECC-CSSCEEEEEEETTT-EEEEEETT-----SEEEEEETTTTEEEEEE
T ss_pred CCEEEEEcCCC-----EEEEEECCCCccceEecC-CCccEEEEEECCCC-EEEEEeCC-----CcEEEEECCCCcEeEec
Confidence 66777777553 578888776542221111 11122233333 45 66666643 57889998876533321
Q ss_pred CCCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 570 DMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 570 ~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
.. .......+.+ ++.++++|+.++ .+.+||..+..
T Consensus 327 ~~--~~~~i~~~~~s~~~~~l~~~~~dg-----~i~i~~~~~~~ 363 (425)
T 1r5m_A 327 IV--DGVPIFAGRISQDGQKYAVAFMDG-----QVNVYDLKKLN 363 (425)
T ss_dssp EC--TTCCEEEEEECTTSSEEEEEETTS-----CEEEEECHHHH
T ss_pred cc--CCccEEEEEEcCCCCEEEEEECCC-----eEEEEECCCCc
Confidence 11 1112222223 577788887654 57788876544
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=96.30 E-value=0.017 Score=59.98 Aligned_cols=190 Identities=10% Similarity=0.091 Sum_probs=95.6
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeE-EEEE-CCeEEEEcccCCCCCCceeEEeecCCCc-eE
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVS-TAVH-HDVIYAMGGYNGQRRQNSVEKYNYTENQ-WS 472 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~-~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~ 472 (712)
++.+++.|+.+ ..+..||..++.|..+..+........ ++.. +++.++.|+.+ ..+.+||..+.. |.
T Consensus 22 ~g~~l~~~~~d-----~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d-----~~v~vwd~~~~~~~~ 91 (377)
T 3dwl_C 22 QRTEFVTTTAT-----NQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD-----RNAYVYEKRPDGTWK 91 (377)
T ss_dssp SSSEEECCCSS-----SCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETT-----SSEEEC------CCC
T ss_pred CCCEEEEecCC-----CEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCC-----CeEEEEEcCCCCcee
Confidence 45566666643 357788888888887766654333333 3332 46777777754 458889988876 55
Q ss_pred EcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCe-eEEeCCCCC-CCcceEEEEE--CCEEEEEcCC
Q psy14726 473 LIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQ-WTLIEPMRH-RRSGVSCIAY--HECIYVIGGF 546 (712)
Q Consensus 473 ~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~~~p~-~r~~~~~~~~--~~~iyv~GG~ 546 (712)
....+.........+.+ +++.++.|+.++ .+..||..+.+ |.....+.. .......+.+ ++.+++.|+.
T Consensus 92 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 166 (377)
T 3dwl_C 92 QTLVLLRLNRAATFVRWSPNEDKFAVGSGAR-----VISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCA 166 (377)
T ss_dssp CEEECCCCSSCEEEEECCTTSSCCEEEESSS-----CEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEES
T ss_pred eeeEecccCCceEEEEECCCCCEEEEEecCC-----eEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeC
Confidence 44333222222223333 567777777653 57788887765 333322222 1122222222 5667777775
Q ss_pred CCCCccceEEEEeCCCCc----------------EEEcCCCCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECC
Q psy14726 547 NGMSRMCNGEKYNPVTKT----------------WSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEK 608 (712)
Q Consensus 547 ~~~~~~~~v~~yd~~~~~----------------W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~ 608 (712)
+ ..+..||..+.. -..+..+ ........+.+ ++++++.|+.++ .+.+||..
T Consensus 167 d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~-----~i~iwd~~ 235 (377)
T 3dwl_C 167 D-----RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDS-----SVTIAYPS 235 (377)
T ss_dssp S-----SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTT-----EEC-CEEC
T ss_pred C-----CEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCC-----cEEEEECC
Confidence 4 457778875432 1122222 11111222333 677778887665 56777776
Q ss_pred CCe
Q psy14726 609 TDE 611 (712)
Q Consensus 609 ~~~ 611 (712)
+++
T Consensus 236 ~~~ 238 (377)
T 3dwl_C 236 APE 238 (377)
T ss_dssp STT
T ss_pred CCC
Confidence 654
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=96.30 E-value=0.99 Score=51.21 Aligned_cols=252 Identities=9% Similarity=-0.093 Sum_probs=131.0
Q ss_pred eEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCC-----------CccceEEE
Q psy14726 349 ILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGN-----------EYYNSCRC 416 (712)
Q Consensus 349 ~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~-----------~~~~~v~~ 416 (712)
..++++....+.....++.+|..+++........ .. ..+.+.. +++-++++..... .....++.
T Consensus 137 ~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~---~~-~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~ 212 (710)
T 2xdw_A 137 EYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER---VK-FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYY 212 (710)
T ss_dssp SEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE---EC-SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEE
T ss_pred CEEEEEEcCCCCceEEEEEEECCCCCCCcccccC---cc-cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEE
Confidence 3444443333333447889999998876532111 11 1223333 5554445444322 22456999
Q ss_pred EECCCCcEE--EeCCCC-CCcceeEEE-EECCeEEEEcccCCCCCCceeEEeecCC------C--ceEEcccCCccccce
Q psy14726 417 FNAVTKVWK--EIAPMN-FKRCYVSTA-VHHDVIYAMGGYNGQRRQNSVEKYNYTE------N--QWSLIAPMNVERSDA 484 (712)
Q Consensus 417 yd~~~~~W~--~~~~~~-~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~v~~yd~~~------~--~W~~~~~~p~~r~~~ 484 (712)
++..+++.. .+...+ .+....+.. .-+|+..+++...+....+.++.+|..+ . .+..+..-..... .
T Consensus 213 ~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~-~ 291 (710)
T 2xdw_A 213 HVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEY-D 291 (710)
T ss_dssp EETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCE-E
T ss_pred EECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEE-E
Confidence 999887632 221221 223233333 3455544444332222257899999876 4 5777754322221 1
Q ss_pred eEEEECCEEEEEcccCCCCccCceEEeeCCCC---eeEEeCCCCCCCcceEEEEE-CCEEEEEcCCCCCCccceEEEEeC
Q psy14726 485 SATTLQGKIYITGGFNGHNCLNSCEVYDPECN---QWTLIEPMRHRRSGVSCIAY-HECIYVIGGFNGMSRMCNGEKYNP 560 (712)
Q Consensus 485 ~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~---~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~ 560 (712)
....-++.||+.+..+. ....++.+|..+. .|+.+.+-.....-..+... ++.+++....++ ...++.+|+
T Consensus 292 ~~s~dg~~l~~~s~~~~--~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g---~~~l~~~~~ 366 (710)
T 2xdw_A 292 YVTNEGTVFTFKTNRHS--PNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDV---KNTLQLHDL 366 (710)
T ss_dssp EEEEETTEEEEEECTTC--TTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETT---EEEEEEEET
T ss_pred EEeccCCEEEEEECCCC--CCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECC---EEEEEEEEC
Confidence 22233678888875432 2457899998876 48877543221222334445 778887765432 356899998
Q ss_pred CCCc-EEEcCCCCCCccceEEEEE--CC-EEEEEcccCCCceeeeEEEEECCCCe--EEEc
Q psy14726 561 VTKT-WSQVPDMYNPRSNFAIEVI--DD-MIFAIGGFNGVTTIYHVECYDEKTDE--WYEA 615 (712)
Q Consensus 561 ~~~~-W~~~~~~p~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~v~~yd~~~~~--W~~~ 615 (712)
.+++ ...+.. + ......+.. ++ .+++... +. ..-..++.||+.+++ ++.+
T Consensus 367 ~~g~~~~~l~~-~--~~~v~~~~~s~d~~~l~~~~s-s~-~~P~~i~~~d~~tg~~~~~~l 422 (710)
T 2xdw_A 367 ATGALLKIFPL-E--VGSVVGYSGQKKDTEIFYQFT-SF-LSPGIIYHCDLTKEELEPRVF 422 (710)
T ss_dssp TTCCEEEEECC-C--SSEEEEEECCTTCSEEEEEEE-CS-SCCCEEEEEETTSSSCCCEEE
T ss_pred CCCCEEEecCC-C--CceEEEEecCCCCCEEEEEEe-CC-CCCCEEEEEECCCCccceEEe
Confidence 6554 445432 2 111122222 33 4444322 21 112468999998877 6554
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.28 E-value=0.062 Score=61.84 Aligned_cols=188 Identities=14% Similarity=0.095 Sum_probs=107.0
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEE--C--CeEEEEcccCCCCCCceeEEeecCCCce
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH--H--DVIYAMGGYNGQRRQNSVEKYNYTENQW 471 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~v~~yd~~~~~W 471 (712)
++..++.||.+ ..+..||..++++..+..+.........+.+ + +..++.||.+ ..+.+||..+++|
T Consensus 20 dg~~latg~~d-----g~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~D-----g~I~vwd~~~~~~ 89 (753)
T 3jro_A 20 YGKRLATCSSD-----KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-----GKVLIWKEENGRW 89 (753)
T ss_dssp SSCCEEEEETT-----TEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETT-----SCEEEEEEETTEE
T ss_pred CCCeEEEEECC-----CcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCC-----CeEEEEECCCCcc
Confidence 45566677654 3588888887777766555433333333333 3 6777778754 4589999999988
Q ss_pred EEcccCCccccceeEEEE--C--CEEEEEcccCCCCccCceEEeeCCCCeeE---EeCCCCCCCcceEEEEE--------
Q psy14726 472 SLIAPMNVERSDASATTL--Q--GKIYITGGFNGHNCLNSCEVYDPECNQWT---LIEPMRHRRSGVSCIAY-------- 536 (712)
Q Consensus 472 ~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~v~~yd~~~~~W~---~~~~~p~~r~~~~~~~~-------- 536 (712)
..+..+........++.+ + +.+++.||.++ .+..||..+..-. .....+. .-.++...
T Consensus 90 ~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg-----~I~vwdl~~~~~~~~~~~~~~~~--~v~~l~~~p~~~~~~~ 162 (753)
T 3jro_A 90 SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDG-----KVSVVEFKENGTTSPIIIDAHAI--GVNSASWAPATIEEDG 162 (753)
T ss_dssp EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS-----EEEEEECCSSSCCCCEEEECCSS--CEEEEEECCCC-----
T ss_pred cccccccCCCCCeEEEEECCCCCCCEEEEEeCCC-----cEEEEEeecCCCcceeEeecCCC--ceEEEEecCccccccc
Confidence 777555433333344444 3 67888887664 5778887765211 1111111 11112211
Q ss_pred ------CCEEEEEcCCCCCCccceEEEEeCCCC--cEEEcCCCCCCccceEEEEE--C---CEEEEEcccCCCceeeeEE
Q psy14726 537 ------HECIYVIGGFNGMSRMCNGEKYNPVTK--TWSQVPDMYNPRSNFAIEVI--D---DMIFAIGGFNGVTTIYHVE 603 (712)
Q Consensus 537 ------~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~---~~i~v~GG~~~~~~~~~v~ 603 (712)
++.+++.|+.+ ..+..||..+. .+..+..+.........+.+ + +.+++.||.++ .+.
T Consensus 163 ~~~~~~d~~~l~sgs~d-----g~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg-----~I~ 232 (753)
T 3jro_A 163 EHNGTKESRKFVTGGAD-----NLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDR-----TCI 232 (753)
T ss_dssp ----CGGGCCEEEEETT-----SCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSS-----CEE
T ss_pred ccccCCCCCEEEEEECC-----CeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCC-----EEE
Confidence 35667777654 35677776543 44444333222222233333 4 78899998765 467
Q ss_pred EEECCCC
Q psy14726 604 CYDEKTD 610 (712)
Q Consensus 604 ~yd~~~~ 610 (712)
+||+.++
T Consensus 233 iwd~~~~ 239 (753)
T 3jro_A 233 IWTQDNE 239 (753)
T ss_dssp EEEESSS
T ss_pred EecCCCC
Confidence 7887764
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=96.26 E-value=0.73 Score=46.07 Aligned_cols=219 Identities=8% Similarity=-0.075 Sum_probs=116.4
Q ss_pred ceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEE-CCeEEEEcccCCCCCCceeEEeec
Q psy14726 389 YHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH-HDVIYAMGGYNGQRRQNSVEKYNY 466 (712)
Q Consensus 389 ~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~ 466 (712)
..+.++. ++.||+.--. ...++++|+.... ......+ ..-++++.. +|++|+...... ...++++|+
T Consensus 34 pegia~~~~g~lyv~d~~-----~~~I~~~d~~g~~-~~~~~~~--~~p~gia~~~dG~l~vad~~~~---~~~v~~~d~ 102 (306)
T 2p4o_A 34 LENLASAPDGTIFVTNHE-----VGEIVSITPDGNQ-QIHATVE--GKVSGLAFTSNGDLVATGWNAD---SIPVVSLVK 102 (306)
T ss_dssp EEEEEECTTSCEEEEETT-----TTEEEEECTTCCE-EEEEECS--SEEEEEEECTTSCEEEEEECTT---SCEEEEEEC
T ss_pred cceEEECCCCCEEEEeCC-----CCeEEEECCCCce-EEEEeCC--CCceeEEEcCCCcEEEEeccCC---cceEEEEcC
Confidence 3445543 5678877531 2468999987643 2222222 233444443 678988753211 135888999
Q ss_pred CCCceEEcccCCccccceeEEEE-CCEEEEEcccCCCCccCceEEeeCCCCe---eEEeCC----CCC-C-CcceEEEEE
Q psy14726 467 TENQWSLIAPMNVERSDASATTL-QGKIYITGGFNGHNCLNSCEVYDPECNQ---WTLIEP----MRH-R-RSGVSCIAY 536 (712)
Q Consensus 467 ~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~---W~~~~~----~p~-~-r~~~~~~~~ 536 (712)
.+.+.+.+...+..+...+.+.. ++.+|+.-.. ...++++|+.+.+ |..-+. .+. . ....++..-
T Consensus 103 ~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~-----~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~d 177 (306)
T 2p4o_A 103 SDGTVETLLTLPDAIFLNGITPLSDTQYLTADSY-----RGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRF 177 (306)
T ss_dssp TTSCEEEEEECTTCSCEEEEEESSSSEEEEEETT-----TTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEE
T ss_pred CCCeEEEEEeCCCccccCcccccCCCcEEEEECC-----CCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcC
Confidence 88888877666655554444433 5667876421 2479999988653 211111 111 1 122233333
Q ss_pred CCEEEEEcCCCCCCccceEEEEeCCC-CcE---EEcCCCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 537 HECIYVIGGFNGMSRMCNGEKYNPVT-KTW---SQVPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 537 ~~~iyv~GG~~~~~~~~~v~~yd~~~-~~W---~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
++.||+.--. ...+++||+.. .+. ..+.....| .++++- +|.+|+.-..+ +.|.+||+. ++
T Consensus 178 g~~lyv~d~~-----~~~I~~~~~~~~g~~~~~~~~~~~~~P---~gi~vd~dG~l~va~~~~-----~~V~~~~~~-G~ 243 (306)
T 2p4o_A 178 GNFLYVSNTE-----KMLLLRIPVDSTDKPGEPEIFVEQTNI---DDFAFDVEGNLYGATHIY-----NSVVRIAPD-RS 243 (306)
T ss_dssp TTEEEEEETT-----TTEEEEEEBCTTSCBCCCEEEEESCCC---SSEEEBTTCCEEEECBTT-----CCEEEECTT-CC
T ss_pred CCEEEEEeCC-----CCEEEEEEeCCCCCCCccEEEeccCCC---CCeEECCCCCEEEEeCCC-----CeEEEECCC-CC
Confidence 5689987532 36899999864 221 111111111 223333 67888874322 368999987 55
Q ss_pred EEEccCCCCcccceEEEEEc------CcceeE
Q psy14726 612 WYEATDMNIYRSALSACVIM------GLPNVY 637 (712)
Q Consensus 612 W~~~~~~p~~r~~~~~~~~~------~~~~v~ 637 (712)
...+...+.+-....++.+. +.+|+.
T Consensus 244 ~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt 275 (306)
T 2p4o_A 244 TTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVV 275 (306)
T ss_dssp EEEEECGGGTCTTEEEEEECCSTTTTTEEEEE
T ss_pred EEEEeecccccCCceEEEEecccCCCCEEEEE
Confidence 44433333332334555553 456665
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=96.26 E-value=0.19 Score=49.62 Aligned_cols=209 Identities=11% Similarity=-0.007 Sum_probs=111.1
Q ss_pred CEEEEEeecCCCCccceEEEEECCCCc--EEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCC-ceEE
Q psy14726 397 YNIYVIGGFDGNEYYNSCRCFNAVTKV--WKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTEN-QWSL 473 (712)
Q Consensus 397 ~~lyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~-~W~~ 473 (712)
+++++.|.. ...+..+|+.+++ |+.-..-. .......+..+|++++.+. +.+..||+..+ .|+.
T Consensus 5 ~~~lv~~~~-----~~~v~~~d~~tG~~~w~~~~~~~-~~~~~~~~~pdG~ilvs~~-------~~V~~~d~~G~~~W~~ 71 (276)
T 3no2_A 5 QHLLVGGSG-----WNKIAIINKDTKEIVWEYPLEKG-WECNSVAATKAGEILFSYS-------KGAKMITRDGRELWNI 71 (276)
T ss_dssp CEEEEECTT-----CSEEEEEETTTTEEEEEEECCTT-CCCCEEEECTTSCEEEECB-------SEEEEECTTSCEEEEE
T ss_pred CcEEEeeCC-----CCEEEEEECCCCeEEEEeCCCcc-CCCcCeEECCCCCEEEeCC-------CCEEEECCCCCEEEEE
Confidence 567777653 2568899998876 65432211 1233334445788888432 46999999322 3765
Q ss_pred cccCCccccceeEEEE-CCEEEEEcccCCCCccCceEEeeCCCCe-eEEeC--CCCC--CCcceEEEEECCEEEEEcCCC
Q psy14726 474 IAPMNVERSDASATTL-QGKIYITGGFNGHNCLNSCEVYDPECNQ-WTLIE--PMRH--RRSGVSCIAYHECIYVIGGFN 547 (712)
Q Consensus 474 ~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~--~~p~--~r~~~~~~~~~~~iyv~GG~~ 547 (712)
-.+ .....+++... +|++++..+.. ...+..+|++... |+... ..+. ..........++.+++....
T Consensus 72 ~~~--~~~~~~~~~~~~dG~~lv~~~~~----~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~- 144 (276)
T 3no2_A 72 AAP--AGCEMQTARILPDGNALVAWCGH----PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFA- 144 (276)
T ss_dssp ECC--TTCEEEEEEECTTSCEEEEEEST----TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETT-
T ss_pred cCC--CCccccccEECCCCCEEEEecCC----CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecC-
Confidence 432 11122333333 67777765431 2467888885442 54331 1111 11112233346666665532
Q ss_pred CCCccceEEEEeCCCC-cEEEcCCCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCC--eEEEcc-CCCCcc
Q psy14726 548 GMSRMCNGEKYNPVTK-TWSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTD--EWYEAT-DMNIYR 622 (712)
Q Consensus 548 ~~~~~~~v~~yd~~~~-~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~--~W~~~~-~~p~~r 622 (712)
...+.+||++-+ .|+.-... ..+++... ++.+++.+..+ ..+..+|++++ .|+.-. .++..+
T Consensus 145 ----~~~v~~~d~~G~~~w~~~~~~----~~~~~~~~~~g~~~v~~~~~-----~~v~~~d~~tG~~~w~~~~~~~~~~~ 211 (276)
T 3no2_A 145 ----TSEVREIAPNGQLLNSVKLSG----TPFSSAFLDNGDCLVACGDA-----HCFVQLNLESNRIVRRVNANDIEGVQ 211 (276)
T ss_dssp ----TTEEEEECTTSCEEEEEECSS----CCCEEEECTTSCEEEECBTT-----SEEEEECTTTCCEEEEEEGGGSBSCC
T ss_pred ----CCEEEEECCCCCEEEEEECCC----CccceeEcCCCCEEEEeCCC-----CeEEEEeCcCCcEEEEecCCCCCCcc
Confidence 357899998732 46654321 12334444 77888877653 25899999965 466542 233222
Q ss_pred c--ceEEEE-EcCcceeEe
Q psy14726 623 S--ALSACV-IMGLPNVYD 638 (712)
Q Consensus 623 ~--~~~~~~-~~~~~~v~~ 638 (712)
. -.++++ -++.+|+..
T Consensus 212 l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 212 LFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp CSEEEEEEECTTSCEEEEE
T ss_pred ccccccceEcCCCCEEEEe
Confidence 2 122333 356677764
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=96.25 E-value=0.46 Score=53.78 Aligned_cols=191 Identities=7% Similarity=-0.054 Sum_probs=104.5
Q ss_pred cceEEEEECCCCcEEEeCCCCCCcce-eEEE-EECCeEEEEcccCCCCCCceeEEeecCCC-ceEEcccCCcccc----c
Q psy14726 411 YNSCRCFNAVTKVWKEIAPMNFKRCY-VSTA-VHHDVIYAMGGYNGQRRQNSVEKYNYTEN-QWSLIAPMNVERS----D 483 (712)
Q Consensus 411 ~~~v~~yd~~~~~W~~~~~~~~~r~~-~~~~-~~~~~iyv~GG~~~~~~~~~v~~yd~~~~-~W~~~~~~p~~r~----~ 483 (712)
...++.+|..+++-..+......... ..++ .-+|+..++++.+.......++.+|+.+. .+..+........ .
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~ 313 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLH 313 (706)
T ss_dssp EEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCS
T ss_pred eeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccC
Confidence 35789999999886665432211122 2222 23666555555443334568999999988 6665532111110 1
Q ss_pred eeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--C-CEEEEEcCCCCCCccceEEEE
Q psy14726 484 ASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--H-ECIYVIGGFNGMSRMCNGEKY 558 (712)
Q Consensus 484 ~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~-~~iyv~GG~~~~~~~~~v~~y 558 (712)
..+..- +|++++.+..++ ...++.+|........+..-.... ...... + +.||+.+..++ .....++.+
T Consensus 314 ~~~~sp~~dg~~l~~~~~~g---~~~l~~~~~~~~~~~~l~~~~~~v--~~~~~~spdg~~l~~~~~~~~-~~~~~l~~~ 387 (706)
T 2z3z_A 314 PLTFLPGSNNQFIWQSRRDG---WNHLYLYDTTGRLIRQVTKGEWEV--TNFAGFDPKGTRLYFESTEAS-PLERHFYCI 387 (706)
T ss_dssp CCEECTTCSSEEEEEECTTS---SCEEEEEETTSCEEEECCCSSSCE--EEEEEECTTSSEEEEEESSSC-TTCBEEEEE
T ss_pred CceeecCCCCEEEEEEccCC---ccEEEEEECCCCEEEecCCCCeEE--EeeeEEcCCCCEEEEEecCCC-CceEEEEEE
Confidence 122223 778666665443 356888887777777664322111 121222 3 45766665422 123578999
Q ss_pred eCCCCcEEEcCCCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 559 NPVTKTWSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 559 d~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
|..+.+...+.. ....++++.. +++.+++...+.. ....++++|..+++
T Consensus 388 d~~~~~~~~l~~---~~~~~~~~~spdg~~l~~~~~~~~-~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 388 DIKGGKTKDLTP---ESGMHRTQLSPDGSAIIDIFQSPT-VPRKVTVTNIGKGS 437 (706)
T ss_dssp ETTCCCCEESCC---SSSEEEEEECTTSSEEEEEEECSS-CSCEEEEEESSSCE
T ss_pred EcCCCCceeccC---CCceEEEEECCCCCEEEEEecCCC-CCcEEEEEECCCCe
Confidence 998887776652 1122333332 5665555543321 22468899988876
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=96.25 E-value=0.32 Score=50.30 Aligned_cols=231 Identities=9% Similarity=0.085 Sum_probs=117.3
Q ss_pred EEEEeecCCCCCCceEEEEECCCCc-------EEEcccCCCCCCCcceEEEEE-C----C---EEEEEeecCCCCccceE
Q psy14726 350 LFAIGGWSGGSPTDFVETYDTRADR-------WVKIEQVDPMGPRAYHGTAVI-G----Y---NIYVIGGFDGNEYYNSC 414 (712)
Q Consensus 350 i~~~GG~~~~~~~~~v~~~d~~~~~-------W~~~~~~~~~~~r~~~~~~~~-~----~---~lyv~GG~~~~~~~~~v 414 (712)
.++.|+.+ ..+..||..+.+ ...+.. ....-.+++.. + + .+++.|+.+ ..+
T Consensus 28 ~l~s~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~----h~~~v~~~~~~~~~~~~g~~~~~l~s~~~d-----g~i 93 (397)
T 1sq9_A 28 FTVSCSGD-----GYLKVWDNKLLDNENPKDKSYSHFV----HKSGLHHVDVLQAIERDAFELCLVATTSFS-----GDL 93 (397)
T ss_dssp EEEEEETT-----SEEEEEESBCCTTCCGGGGEEEEEC----CTTCEEEEEEEEEEETTTEEEEEEEEEETT-----SCE
T ss_pred eEEEEcCC-----CEEEEEECCCcccccCCCcceEEec----CCCcEEEEEEecccccCCccccEEEEEcCC-----CCE
Confidence 45556532 367888887765 333211 11122333333 4 6 788888754 358
Q ss_pred EEEECCCCc------EEEeCCCCCC---cceeEEEEE-----CCeE-EEEcccCCCCCCceeEEeecCC------Cc---
Q psy14726 415 RCFNAVTKV------WKEIAPMNFK---RCYVSTAVH-----HDVI-YAMGGYNGQRRQNSVEKYNYTE------NQ--- 470 (712)
Q Consensus 415 ~~yd~~~~~------W~~~~~~~~~---r~~~~~~~~-----~~~i-yv~GG~~~~~~~~~v~~yd~~~------~~--- 470 (712)
..||..+++ +..+...+.. ..-.+++.. ++.. ++.|+.+ ..+..||..+ .+
T Consensus 94 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~ 168 (397)
T 1sq9_A 94 LFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK-----GTTYIWKFHPFADESNSLTLN 168 (397)
T ss_dssp EEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT-----SCEEEEEEESSSSHHHHTTTC
T ss_pred EEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC-----CcEEEEeCCccccccccceee
Confidence 888888777 7666544311 222233333 4666 7777754 4577787766 22
Q ss_pred eEEcccC-------CccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCC--C--CCcceEEEEE-
Q psy14726 471 WSLIAPM-------NVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMR--H--RRSGVSCIAY- 536 (712)
Q Consensus 471 W~~~~~~-------p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p--~--~r~~~~~~~~- 536 (712)
|.....+ ........++.+ ++ +++.|+.+ ..+..||..+.+....-... . .......+.+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~ 242 (397)
T 1sq9_A 169 WSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNN-----GTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFS 242 (397)
T ss_dssp CCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTT-----SEEEEEETTTTEEEEEEECCC---CCCCCEEEEEEC
T ss_pred ccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCC-----CcEEEEECCCCceeEEEeccccccccCCccceEEEC
Confidence 2111111 001111222233 56 77777655 36889998877643322210 1 0122222233
Q ss_pred -CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCC-----------CccceEEEEE--CCEEEEEcccCCCceeeeE
Q psy14726 537 -HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYN-----------PRSNFAIEVI--DDMIFAIGGFNGVTTIYHV 602 (712)
Q Consensus 537 -~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~-----------~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v 602 (712)
++.+++.|+.++ ....+..||..+.+-...-..+. .......+.+ ++..++.|+.++ .+
T Consensus 243 ~~~~~l~~~~~d~--~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i 315 (397)
T 1sq9_A 243 PQGSLLAIAHDSN--SFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDG-----KL 315 (397)
T ss_dssp SSTTEEEEEEEET--TEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTS-----EE
T ss_pred CCCCEEEEEecCC--CCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCC-----eE
Confidence 566667776421 11478899987764322211100 1122222333 577778887654 68
Q ss_pred EEEECCCCeE
Q psy14726 603 ECYDEKTDEW 612 (712)
Q Consensus 603 ~~yd~~~~~W 612 (712)
.+||..+.+-
T Consensus 316 ~iwd~~~~~~ 325 (397)
T 1sq9_A 316 RFWDVKTKER 325 (397)
T ss_dssp EEEETTTTEE
T ss_pred EEEEcCCCce
Confidence 8999887654
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.25 E-value=1.3 Score=45.69 Aligned_cols=188 Identities=10% Similarity=-0.040 Sum_probs=94.1
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 474 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 474 (712)
++.+++.|+.+ ..+..||........+..-. ..-.+++. .++..++.|+.+ ..+..||..+.+....
T Consensus 119 ~~~~l~~~~~d-----g~i~i~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~ 186 (425)
T 1r5m_A 119 DGNSIVTGVEN-----GELRLWNKTGALLNVLNFHR--APIVSVKWNKDGTHIISMDVE-----NVTILWNVISGTVMQH 186 (425)
T ss_dssp TSSEEEEEETT-----SCEEEEETTSCEEEEECCCC--SCEEEEEECTTSSEEEEEETT-----CCEEEEETTTTEEEEE
T ss_pred CCCEEEEEeCC-----CeEEEEeCCCCeeeeccCCC--ccEEEEEECCCCCEEEEEecC-----CeEEEEECCCCcEEEE
Confidence 66777777754 35788885444444443211 11222333 256666666643 4588888877765433
Q ss_pred ccCCccc--------------cceeEEEECCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CCE
Q psy14726 475 APMNVER--------------SDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HEC 539 (712)
Q Consensus 475 ~~~p~~r--------------~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~ 539 (712)
-..+... .-.+++...+..+++|+.+ ..+..||..+.+-...-... ...-.+++.. ++.
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----g~i~~~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~ 260 (425)
T 1r5m_A 187 FELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPK-----GAIFVYQITEKTPTGKLIGH-HGPISVLEFNDTNK 260 (425)
T ss_dssp ECCC---------------CCCBSCCEEEETTEEEEECGG-----GCEEEEETTCSSCSEEECCC-SSCEEEEEEETTTT
T ss_pred eeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCC-----CeEEEEEcCCCceeeeeccC-CCceEEEEECCCCC
Confidence 2222111 0222333333345666654 45888998876422111111 1111222222 566
Q ss_pred EEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCeEE
Q psy14726 540 IYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEWY 613 (712)
Q Consensus 540 iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 613 (712)
.++.|+.+ ..+..||..+.+....-.. ....-.+++.. ++ .++.|+.++ .+.+||+.+.+-.
T Consensus 261 ~l~~~~~d-----~~i~i~d~~~~~~~~~~~~-~~~~i~~~~~~~~~-~l~~~~~d~-----~i~i~d~~~~~~~ 323 (425)
T 1r5m_A 261 LLLSASDD-----GTLRIWHGGNGNSQNCFYG-HSQSIVSASWVGDD-KVISCSMDG-----SVRLWSLKQNTLL 323 (425)
T ss_dssp EEEEEETT-----SCEEEECSSSBSCSEEECC-CSSCEEEEEEETTT-EEEEEETTS-----EEEEEETTTTEEE
T ss_pred EEEEEcCC-----CEEEEEECCCCccceEecC-CCccEEEEEECCCC-EEEEEeCCC-----cEEEEECCCCcEe
Confidence 66677643 4678888776432211110 11122333333 55 777777654 6788998876543
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=96.24 E-value=0.13 Score=53.19 Aligned_cols=183 Identities=4% Similarity=-0.020 Sum_probs=100.7
Q ss_pred EEEEEeecCCCCccceEEEEECCCCcEEEeCCCC-CCcceeEEEEE--CCeEEEEcccCCCCCCceeEEeecCCCceEEc
Q psy14726 398 NIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMN-FKRCYVSTAVH--HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 474 (712)
Q Consensus 398 ~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~-~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 474 (712)
.+++.|+.+ ..+..||..+.+........ ....-.+++.. ++.+++.|+.+ ..+..||..+.....+
T Consensus 87 ~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~ 156 (383)
T 3ei3_B 87 TTVAVGSKG-----GDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR-----GATTLRDFSGSVIQVF 156 (383)
T ss_dssp TEEEEEEBT-----SCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT-----TEEEEEETTSCEEEEE
T ss_pred CEEEEEcCC-----CeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC-----CEEEEEECCCCceEEE
Confidence 566777754 35889999988876554432 22222334443 34677777643 4688899887766555
Q ss_pred ccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--CCE-EEEEcCCCCC
Q psy14726 475 APMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HEC-IYVIGGFNGM 549 (712)
Q Consensus 475 ~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~ 549 (712)
...........++.+ +++.++.|+.+ ..+..||.....-..+... ......+.+ ++. +++.|+.+
T Consensus 157 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~h---~~~v~~~~~~~~~~~~l~s~~~d-- 226 (383)
T 3ei3_B 157 AKTDSWDYWYCCVDVSVSRQMLATGDST-----GRLLLLGLDGHEIFKEKLH---KAKVTHAEFNPRCDWLMATSSVD-- 226 (383)
T ss_dssp ECCCCSSCCEEEEEEETTTTEEEEEETT-----SEEEEEETTSCEEEEEECS---SSCEEEEEECSSCTTEEEEEETT--
T ss_pred eccCCCCCCeEEEEECCCCCEEEEECCC-----CCEEEEECCCCEEEEeccC---CCcEEEEEECCCCCCEEEEEeCC--
Confidence 433221122222222 56777777765 4688888855443333221 122222222 344 77777754
Q ss_pred CccceEEEEeCCC----CcEEEcCCCCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCC
Q psy14726 550 SRMCNGEKYNPVT----KTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTD 610 (712)
Q Consensus 550 ~~~~~v~~yd~~~----~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~ 610 (712)
..+..||..+ ........ ....-.+++.. ++..++.|+.++ .+.+||..+.
T Consensus 227 ---~~i~iwd~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~~l~~~~~d~-----~i~iwd~~~~ 283 (383)
T 3ei3_B 227 ---ATVKLWDLRNIKDKNSYIAEMP--HEKPVNAAYFNPTDSTKLLTTDQRN-----EIRVYSSYDW 283 (383)
T ss_dssp ---SEEEEEEGGGCCSTTCEEEEEE--CSSCEEEEEECTTTSCEEEEEESSS-----EEEEEETTBT
T ss_pred ---CEEEEEeCCCCCcccceEEEec--CCCceEEEEEcCCCCCEEEEEcCCC-----cEEEEECCCC
Confidence 4688888876 33322211 11111222222 567778887654 6788887764
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=96.22 E-value=0.37 Score=54.65 Aligned_cols=238 Identities=8% Similarity=-0.066 Sum_probs=125.5
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCC-----CcEEEeCCCCCCc--
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVT-----KVWKEIAPMNFKR-- 434 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~-----~~W~~~~~~~~~r-- 434 (712)
..++.+|..+++-..+..... .. ..++.. +++.+++.. ...++.+|..+ ++...+.......
T Consensus 101 ~~i~~~d~~~~~~~~l~~~~~---~~-~~~~~SpdG~~la~~~------~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~ 170 (706)
T 2z3z_A 101 GGLVGFDMLARKVTYLFDTNE---ET-ASLDFSPVGDRVAYVR------NHNLYIARGGKLGEGMSRAIAVTIDGTETLV 170 (706)
T ss_dssp TEEEEEETTTTEEEEEECCTT---CC-TTCEECTTSSEEEEEE------TTEEEEEECBCTTSCCCCCEESCSCCBTTEE
T ss_pred CEEEEEECCCCceEEccCCcc---cc-cCCcCCCCCCEEEEEE------CCeEEEEecCcccccCCCcEEeccCCCCCeE
Confidence 578899998887665432211 11 112222 443333432 14688999888 7766654433221
Q ss_pred ------------ceeEEEEECCeEEEEcccCC----------------------------CCCCceeEEeecCCCceEEc
Q psy14726 435 ------------CYVSTAVHHDVIYAMGGYNG----------------------------QRRQNSVEKYNYTENQWSLI 474 (712)
Q Consensus 435 ------------~~~~~~~~~~~iyv~GG~~~----------------------------~~~~~~v~~yd~~~~~W~~~ 474 (712)
.......-+|+.++++..+. ......++++|..+.+-..+
T Consensus 171 ~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~ 250 (706)
T 2z3z_A 171 YGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYL 250 (706)
T ss_dssp ESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEEC
T ss_pred cccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEee
Confidence 12222334666656554321 11235799999988876555
Q ss_pred ccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCC-eeEEeCCCCCCC----cceEEEEE--CCEEEEEcC
Q psy14726 475 APMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECN-QWTLIEPMRHRR----SGVSCIAY--HECIYVIGG 545 (712)
Q Consensus 475 ~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~-~W~~~~~~p~~r----~~~~~~~~--~~~iyv~GG 545 (712)
............+.+ +|+..++++.+.......+..+|..++ .+..+....... .......- ++++++.+.
T Consensus 251 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~ 330 (706)
T 2z3z_A 251 QTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSR 330 (706)
T ss_dssp CCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEEC
T ss_pred ccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEc
Confidence 332111122223333 666444544443334568999999998 776553211111 11122333 677666664
Q ss_pred CCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE--C-CEEEEEcccCCCceeeeEEEEECCCCeEEEcc
Q psy14726 546 FNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--D-DMIFAIGGFNGVTTIYHVECYDEKTDEWYEAT 616 (712)
Q Consensus 546 ~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~-~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 616 (712)
.++ ...++.+|........+..-.... .....+ + +.|++.+..++ .....++.+|..++....+.
T Consensus 331 ~~g---~~~l~~~~~~~~~~~~l~~~~~~v--~~~~~~spdg~~l~~~~~~~~-~~~~~l~~~d~~~~~~~~l~ 398 (706)
T 2z3z_A 331 RDG---WNHLYLYDTTGRLIRQVTKGEWEV--TNFAGFDPKGTRLYFESTEAS-PLERHFYCIDIKGGKTKDLT 398 (706)
T ss_dssp TTS---SCEEEEEETTSCEEEECCCSSSCE--EEEEEECTTSSEEEEEESSSC-TTCBEEEEEETTCCCCEESC
T ss_pred cCC---ccEEEEEECCCCEEEecCCCCeEE--EeeeEEcCCCCEEEEEecCCC-CceEEEEEEEcCCCCceecc
Confidence 432 467888997777777774322211 121233 3 45666554432 22247899999888766654
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.21 E-value=0.62 Score=49.43 Aligned_cols=238 Identities=5% Similarity=-0.068 Sum_probs=117.7
Q ss_pred eEEEEeecCCCCCCceEEEEECC--CCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEE
Q psy14726 349 ILFAIGGWSGGSPTDFVETYDTR--ADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWK 425 (712)
Q Consensus 349 ~i~~~GG~~~~~~~~~v~~~d~~--~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~ 425 (712)
.+++.|+.+ ..+..||.. ++.....-.. ...+..-.+++.. ++..+++|+.+ ..++.+|..+....
T Consensus 116 ~l~~~~~~d-----g~v~iwd~~~~~~~~~~~~~~-~~~~~~v~~~~~sp~~~~l~~~~~~-----g~v~~~~~~~~~~~ 184 (450)
T 2vdu_B 116 RLIACADSD-----KSLLVFDVDKTSKNVLKLRKR-FCFSKRPNAISIAEDDTTVIIADKF-----GDVYSIDINSIPEE 184 (450)
T ss_dssp EEEEEEGGG-----TEEEEEEECSSSSSCEEEEEE-EECSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTSCCCS
T ss_pred EEEEEECCC-----CeEEEEECcCCCCceeeeeec-ccCCCCceEEEEcCCCCEEEEEeCC-----CcEEEEecCCcccc
Confidence 445666642 357778876 4443321000 0011111233333 56666777642 45788887765532
Q ss_pred E--eCCCCCCc-ceeEE-EEEC---CeEEEEcccCCCCCCceeEEeecCCCceEEc-ccCCccccceeEEEECCEEEEEc
Q psy14726 426 E--IAPMNFKR-CYVST-AVHH---DVIYAMGGYNGQRRQNSVEKYNYTENQWSLI-APMNVERSDASATTLQGKIYITG 497 (712)
Q Consensus 426 ~--~~~~~~~r-~~~~~-~~~~---~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~~~iyv~G 497 (712)
. ...+.... .-.++ ..-+ +++++.|+.+ ..+.+||..+.+.... ..-........+.. ++++++.|
T Consensus 185 ~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d-----~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~ 258 (450)
T 2vdu_B 185 KFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRD-----EHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSA 258 (450)
T ss_dssp SCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETT-----SCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEE
T ss_pred cccceeeecccCceEEEEEcCCCCCCcEEEEEcCC-----CcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEE
Confidence 1 11111111 11222 2345 7788888754 4688899877654322 11111111122222 77778888
Q ss_pred ccCCCCccCceEEeeCCCCeeEEeCCC------------------------CCCCcceEEEEE--CCEEEEEcCCCCCCc
Q psy14726 498 GFNGHNCLNSCEVYDPECNQWTLIEPM------------------------RHRRSGVSCIAY--HECIYVIGGFNGMSR 551 (712)
Q Consensus 498 G~~~~~~~~~v~~yd~~~~~W~~~~~~------------------------p~~r~~~~~~~~--~~~iyv~GG~~~~~~ 551 (712)
|.+ ..+..||..+++....-.. +....-..++.. +..|++.++.
T Consensus 259 ~~d-----~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~----- 328 (450)
T 2vdu_B 259 GGD-----DKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEA----- 328 (450)
T ss_dssp ESS-----SEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETT-----
T ss_pred eCC-----CeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECC-----
Confidence 755 4688899888764322111 001111122222 3345554423
Q ss_pred cceEEEEeC--C-CCcEEEcCCCCCCccceEEEEECCEEEEEcccCCC----ceeeeEEEEECCCCeEE
Q psy14726 552 MCNGEKYNP--V-TKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGV----TTIYHVECYDEKTDEWY 613 (712)
Q Consensus 552 ~~~v~~yd~--~-~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~----~~~~~v~~yd~~~~~W~ 613 (712)
...+..||. . ..++..+..++....-.+++...+.+++..+.... ...-.++.++.+++.|.
T Consensus 329 d~~i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~~~~~~ 397 (450)
T 2vdu_B 329 TKCIIILEMSEKQKGDLALKQIITFPYNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLNENSFV 397 (450)
T ss_dssp CSEEEEEEECSSSTTCEEEEEEEECSSCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETTTTEEE
T ss_pred CCeEEEEEeccCCCCceeeccEeccCCceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcCCCeEE
Confidence 256778887 3 34566554443333334455556777776554321 12236777888888885
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=96.21 E-value=0.27 Score=48.99 Aligned_cols=221 Identities=9% Similarity=-0.049 Sum_probs=113.5
Q ss_pred ceEEEEECCCCcEEEcccCCCC-CCCcceEEEEE-C-CEEEEEeecCCCCccceEEEEECCCCcEEEe-CCCCCC---cc
Q psy14726 363 DFVETYDTRADRWVKIEQVDPM-GPRAYHGTAVI-G-YNIYVIGGFDGNEYYNSCRCFNAVTKVWKEI-APMNFK---RC 435 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~-~~r~~~~~~~~-~-~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~~~~---r~ 435 (712)
..+..||+.++++..+...... ....-+++++. + +.+|+.+.. +.+++||+. ++...+ ...... ..
T Consensus 46 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~------~~l~~~d~~-g~~~~~~~~~~~~~~~~~ 118 (314)
T 1pjx_A 46 GEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR------LGLLVVQTD-GTFEEIAKKDSEGRRMQG 118 (314)
T ss_dssp CEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT------TEEEEEETT-SCEEECCSBCTTSCBCBC
T ss_pred CEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC------CCEEEEeCC-CCEEEEEeccCCCccccC
Confidence 4688999888888764321000 01122344443 5 788887641 368999998 777665 332211 11
Q ss_pred eeEEEE-ECCeEEEEcccC----------CCCCCceeEEeecCCCceEEccc-CCccccceeEEEE-----CC-EEEEEc
Q psy14726 436 YVSTAV-HHDVIYAMGGYN----------GQRRQNSVEKYNYTENQWSLIAP-MNVERSDASATTL-----QG-KIYITG 497 (712)
Q Consensus 436 ~~~~~~-~~~~iyv~GG~~----------~~~~~~~v~~yd~~~~~W~~~~~-~p~~r~~~~~~~~-----~~-~iyv~G 497 (712)
-..++. -+|++|+..... .......+++||+. .+...+.. ...+ .+.+.. ++ .+|+..
T Consensus 119 ~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~---~~i~~~~~~d~dg~~l~v~~ 194 (314)
T 1pjx_A 119 CNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFP---NGIAVRHMNDGRPYQLIVAE 194 (314)
T ss_dssp CCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSE---EEEEEEECTTSCEEEEEEEE
T ss_pred CcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCCc---ceEEEecccCCCCCEEEEEE
Confidence 223333 367888865322 11123579999987 55544321 1111 233333 34 577765
Q ss_pred ccCCCCccCceEEeeCC-CCeeEE---eCCCCCC--CcceEEEEE-CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCC
Q psy14726 498 GFNGHNCLNSCEVYDPE-CNQWTL---IEPMRHR--RSGVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPD 570 (712)
Q Consensus 498 G~~~~~~~~~v~~yd~~-~~~W~~---~~~~p~~--r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 570 (712)
..+ ..+.+||+. ++++.. ...++.. ..-.+++.. ++.||+.... ...+.+||+.+.+....-.
T Consensus 195 ~~~-----~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~-----~~~i~~~d~~~g~~~~~~~ 264 (314)
T 1pjx_A 195 TPT-----KKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWG-----SSHIEVFGPDGGQPKMRIR 264 (314)
T ss_dssp TTT-----TEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEET-----TTEEEEECTTCBSCSEEEE
T ss_pred CCC-----CeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcC-----CCEEEEEcCCCCcEeEEEe
Confidence 322 468888875 444322 1222222 111223322 5788887532 2578999998543211111
Q ss_pred CCCCccceEEEEE-CCE-EEEEcccCCCceeeeEEEEECCCC
Q psy14726 571 MYNPRSNFAIEVI-DDM-IFAIGGFNGVTTIYHVECYDEKTD 610 (712)
Q Consensus 571 ~p~~r~~~~~~~~-~~~-i~v~GG~~~~~~~~~v~~yd~~~~ 610 (712)
.+. ..-.+++.- ++. ||+.+..+ ..+++|++...
T Consensus 265 ~~~-~~~~~i~~~~dg~~l~v~~~~~-----~~l~~~~~~~~ 300 (314)
T 1pjx_A 265 CPF-EKPSNLHFKPQTKTIFVTEHEN-----NAVWKFEWQRN 300 (314)
T ss_dssp CSS-SCEEEEEECTTSSEEEEEETTT-----TEEEEEECSSC
T ss_pred CCC-CCceeEEECCCCCEEEEEeCCC-----CeEEEEeCCCC
Confidence 221 122233322 444 77765432 36888998754
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=96.19 E-value=0.99 Score=51.21 Aligned_cols=248 Identities=8% Similarity=-0.080 Sum_probs=129.3
Q ss_pred CCCceEEEEECCCCcEEEcccC-CCCCC-Ccce-EEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcc
Q psy14726 360 SPTDFVETYDTRADRWVKIEQV-DPMGP-RAYH-GTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRC 435 (712)
Q Consensus 360 ~~~~~v~~~d~~~~~W~~~~~~-~~~~~-r~~~-~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~ 435 (712)
.....++..+...+.|..+... .+... .... +.+.. +++.++++...++.....++.+|..+++........ ...
T Consensus 95 ~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~ 173 (710)
T 2xdw_A 95 QNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKF 173 (710)
T ss_dssp CSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECS
T ss_pred ceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-ccc
Confidence 3445677777666666643111 11111 1112 22222 666666655433333457999999999886542111 111
Q ss_pred eeEEEE-ECCeEEEEcccCCC-----------CCCceeEEeecCCCceE--EcccCC-ccccceeEEE-ECCEEEEEccc
Q psy14726 436 YVSTAV-HHDVIYAMGGYNGQ-----------RRQNSVEKYNYTENQWS--LIAPMN-VERSDASATT-LQGKIYITGGF 499 (712)
Q Consensus 436 ~~~~~~-~~~~iyv~GG~~~~-----------~~~~~v~~yd~~~~~W~--~~~~~p-~~r~~~~~~~-~~~~iyv~GG~ 499 (712)
.+.+. -+|+-++++..... .....+++++..+.+.. .+...+ .+........ -+|+..+++..
T Consensus 174 -~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~ 252 (710)
T 2xdw_A 174 -SCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIR 252 (710)
T ss_dssp -CCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred -ceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEE
Confidence 12233 35654454443322 22456899998887642 221222 1221122222 25554444433
Q ss_pred CCCCccCceEEeeCCC------C--eeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCC---cEEEc
Q psy14726 500 NGHNCLNSCEVYDPEC------N--QWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTK---TWSQV 568 (712)
Q Consensus 500 ~~~~~~~~v~~yd~~~------~--~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~---~W~~~ 568 (712)
.+....+.++.+|..+ . .+..+..-.... .......++.||+.+..+. ....++.+|..+. .|+.+
T Consensus 253 ~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~--~~~~l~~~d~~~~~~~~~~~l 329 (710)
T 2xdw_A 253 EGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGE-YDYVTNEGTVFTFKTNRHS--PNYRLINIDFTDPEESKWKVL 329 (710)
T ss_dssp CSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSC-EEEEEEETTEEEEEECTTC--TTCEEEEEETTSCCGGGCEEE
T ss_pred ccCCCccEEEEEECcccccccCCccceEEeeCCCCcE-EEEEeccCCEEEEEECCCC--CCCEEEEEeCCCCCcccceec
Confidence 2222246899999876 4 577775432222 1223334678888875432 2467999998875 58887
Q ss_pred CCCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCe-EEEc
Q psy14726 569 PDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDE-WYEA 615 (712)
Q Consensus 569 ~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~-W~~~ 615 (712)
........-.+++.. ++.+++.+..++ ...++++|+.+++ ...+
T Consensus 330 ~~~~~~~~~~~~~~~~~~~lv~~~~~~g---~~~l~~~~~~~g~~~~~l 375 (710)
T 2xdw_A 330 VPEHEKDVLEWVACVRSNFLVLCYLHDV---KNTLQLHDLATGALLKIF 375 (710)
T ss_dssp ECCCSSCEEEEEEEETTTEEEEEEEETT---EEEEEEEETTTCCEEEEE
T ss_pred cCCCCCCeEEEEEEEcCCEEEEEEEECC---EEEEEEEECCCCCEEEec
Confidence 443221223344555 778888766554 3468999986554 4444
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.19 E-value=0.42 Score=47.32 Aligned_cols=188 Identities=8% Similarity=0.108 Sum_probs=91.0
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA 475 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 475 (712)
++..++.|+.+ ..+..||....... +.....+-........++..++.|+.+ ..+..||.....- .+.
T Consensus 113 ~~~~l~~~~~d-----~~i~~~d~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~-~~~ 180 (313)
T 3odt_A 113 QDGVVISGSWD-----KTAKVWKEGSLVYN-LQAHNASVWDAKVVSFSENKFLTASAD-----KTIKLWQNDKVIK-TFS 180 (313)
T ss_dssp ETTEEEEEETT-----SEEEEEETTEEEEE-EECCSSCEEEEEEEETTTTEEEEEETT-----SCEEEEETTEEEE-EEC
T ss_pred cCCEEEEEeCC-----CCEEEEcCCcEEEe-cccCCCceeEEEEccCCCCEEEEEECC-----CCEEEEecCceEE-EEe
Confidence 55566677653 35778882222221 111111111111122256777777654 3577888322211 111
Q ss_pred cCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CCEEEEEcCCCCCCccce
Q psy14726 476 PMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HECIYVIGGFNGMSRMCN 554 (712)
Q Consensus 476 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~ 554 (712)
..........+..-++. ++.|+.+ ..+..||..+.+-...-.... ..-.+++.. +++ ++.||.+ ..
T Consensus 181 ~~~~~~i~~~~~~~~~~-~~~~~~d-----g~i~i~d~~~~~~~~~~~~~~-~~i~~~~~~~~~~-l~~~~~d-----g~ 247 (313)
T 3odt_A 181 GIHNDVVRHLAVVDDGH-FISCSND-----GLIKLVDMHTGDVLRTYEGHE-SFVYCIKLLPNGD-IVSCGED-----RT 247 (313)
T ss_dssp SSCSSCEEEEEEEETTE-EEEEETT-----SEEEEEETTTCCEEEEEECCS-SCEEEEEECTTSC-EEEEETT-----SE
T ss_pred ccCcccEEEEEEcCCCe-EEEccCC-----CeEEEEECCchhhhhhhhcCC-ceEEEEEEecCCC-EEEEecC-----CE
Confidence 11111122222233677 6667655 358889987665322211111 111222222 444 5556543 57
Q ss_pred EEEEeCCCCcEEEcCCCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCeEEEc
Q psy14726 555 GEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 555 v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
+..||..+.+....-..+... -.+++.. +++ ++.||.++ .+.+||..++++...
T Consensus 248 v~iwd~~~~~~~~~~~~~~~~-i~~~~~~~~~~-~~~~~~dg-----~i~iw~~~~~~~~~~ 302 (313)
T 3odt_A 248 VRIWSKENGSLKQVITLPAIS-IWSVDCMSNGD-IIVGSSDN-----LVRIFSQEKSRWASE 302 (313)
T ss_dssp EEEECTTTCCEEEEEECSSSC-EEEEEECTTSC-EEEEETTS-----CEEEEESCGGGCCC-
T ss_pred EEEEECCCCceeEEEeccCce-EEEEEEccCCC-EEEEeCCC-----cEEEEeCCCCceeeh
Confidence 889999887654432222211 1223322 556 55677655 688999998887554
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=96.16 E-value=1.2 Score=44.46 Aligned_cols=189 Identities=9% Similarity=0.094 Sum_probs=89.4
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCC--cEEEcccCCCCCCCcceEEEEE---CCEEEEEeecCCCCccceEEEEECCCC
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRAD--RWVKIEQVDPMGPRAYHGTAVI---GYNIYVIGGFDGNEYYNSCRCFNAVTK 422 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~--~W~~~~~~~~~~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~v~~yd~~~~ 422 (712)
+..++.|+.+ ..+..||..++ .+..+.... .....-.+++.. ++.+++.|+.++ .+..||..+.
T Consensus 23 ~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~d~~~l~s~~~dg-----~v~vwd~~~~ 91 (351)
T 3f3f_A 23 GRHVATCSSD-----QHIKVFKLDKDTSNWELSDSWR-AHDSSIVAIDWASPEYGRIIASASYDK-----TVKLWEEDPD 91 (351)
T ss_dssp SSEEEEEETT-----SEEEEEEECSSSCCEEEEEEEE-CCSSCEEEEEECCGGGCSEEEEEETTS-----CEEEEEECTT
T ss_pred CCEEEEeeCC-----CeEEEEECCCCCCcceecceec-cCCCcEEEEEEcCCCCCCEEEEEcCCC-----eEEEEecCCC
Confidence 3455666632 35777776643 333311111 011112233333 267778887543 4778887664
Q ss_pred -------cEEEeCCCCCCccee-EEEEE-C--CeEEEEcccCCCCCCceeEEeecCCCc----eEEc---ccCC---ccc
Q psy14726 423 -------VWKEIAPMNFKRCYV-STAVH-H--DVIYAMGGYNGQRRQNSVEKYNYTENQ----WSLI---APMN---VER 481 (712)
Q Consensus 423 -------~W~~~~~~~~~r~~~-~~~~~-~--~~iyv~GG~~~~~~~~~v~~yd~~~~~----W~~~---~~~p---~~r 481 (712)
.|..+..+....... +++.. + +..++.|+.+ ..+..||..+.+ |..- ..+. ...
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (351)
T 3f3f_A 92 QEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGND-----GILRLYDALEPSDLRSWTLTSEMKVLSIPPANH 166 (351)
T ss_dssp SCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-----CEEEEEECSSTTCTTCCEEEEEEESCSCCCSSC
T ss_pred cccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCC-----CcEEEecCCChHHhccccccccccccccccCCc
Confidence 344333332222222 23332 3 6677777643 468888877654 3211 1111 111
Q ss_pred -cceeEEEE-----CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcce-EEEEE-CC----EEEEEcCCCCC
Q psy14726 482 -SDASATTL-----QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGV-SCIAY-HE----CIYVIGGFNGM 549 (712)
Q Consensus 482 -~~~~~~~~-----~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~-~~~~~-~~----~iyv~GG~~~~ 549 (712)
....+..+ ++..++.|+.++ .+..++........+..++...... +++.. ++ .+++.|+.+
T Consensus 167 ~~~~~~~~~~p~~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~d-- 239 (351)
T 3f3f_A 167 LQSDFCLSWCPSRFSPEKLAVSALEQ-----AIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKD-- 239 (351)
T ss_dssp SCCCEEEEECCCSSSCCEEEEEETTE-----EEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETT--
T ss_pred ccceeEEEeccCCCCCcEEEEecCCC-----cEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCC--
Confidence 11112222 266777777553 3445555666665554443322222 22323 33 678888765
Q ss_pred CccceEEEEeCCC
Q psy14726 550 SRMCNGEKYNPVT 562 (712)
Q Consensus 550 ~~~~~v~~yd~~~ 562 (712)
..+..||..+
T Consensus 240 ---g~i~iwd~~~ 249 (351)
T 3f3f_A 240 ---GRIRIFKITE 249 (351)
T ss_dssp ---SCEEEEEEEE
T ss_pred ---CeEEEEeCCC
Confidence 3455666543
|
| >3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A | Back alignment and structure |
|---|
Probab=96.14 E-value=0.27 Score=56.49 Aligned_cols=211 Identities=10% Similarity=0.057 Sum_probs=110.3
Q ss_pred eEEEEECCCCcEEEcccCCCC---CCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCC------CcEE---Ee---
Q psy14726 364 FVETYDTRADRWVKIEQVDPM---GPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVT------KVWK---EI--- 427 (712)
Q Consensus 364 ~v~~~d~~~~~W~~~~~~~~~---~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~------~~W~---~~--- 427 (712)
-+..||+.++++......... ....-+++... ++.|++. ... ..+++||+.+ ..+. ..
T Consensus 393 GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWig-T~~-----~Gl~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (758)
T 3ott_A 393 SINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWIS-TCL-----GGIFVVDKHKLMQSTSGQYIAEQNYSVH 466 (758)
T ss_dssp EEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEEE-ESS-----SCEEEEEHHHHHHCCSSEEECSEEECGG
T ss_pred cHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEEE-ECC-----CceEEEccccccccCCcceecccccccc
Confidence 578899999988765321111 11112233322 5678773 321 2378888764 2221 11
Q ss_pred CCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCcc-ccceeEEEE--CCEEEEEcccCCCC
Q psy14726 428 APMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVE-RSDASATTL--QGKIYITGGFNGHN 503 (712)
Q Consensus 428 ~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~-r~~~~~~~~--~~~iyv~GG~~~~~ 503 (712)
..++... -.++.. -+|.|++.||.. .-+.+||+.+++++....-... .....+... +|.|++.. .
T Consensus 467 ~~l~~~~-i~~i~~d~~g~lWi~~~t~-----~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt-~---- 535 (758)
T 3ott_A 467 NGLSGMF-INQIIPDNEGNVWVLLYNN-----KGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVGF-H---- 535 (758)
T ss_dssp GTCSCSC-EEEEEECTTSCEEEEETTC-----SSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEEE-T----
T ss_pred cccccce-eeeEEEcCCCCEEEEccCC-----CCcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEEe-c----
Confidence 1122211 122222 357899866542 3489999999998876321111 111222223 57888643 2
Q ss_pred ccCceEEeeCCCCeeEEeC--CCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEE
Q psy14726 504 CLNSCEVYDPECNQWTLIE--PMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIE 581 (712)
Q Consensus 504 ~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~ 581 (712)
.-+.+||+.+++++... .+|.. .-.+++.-+|.|++.+. ..+.+|||.+.+..... ++......++.
T Consensus 536 --~Gl~~~~~~~~~~~~~~~~gl~~~-~i~~i~~~~g~lWi~t~-------~Gl~~~~~~~~~~~~~~-~~~~~~~~~~~ 604 (758)
T 3ott_A 536 --GGVMRINPKDESQQSISFGSFSNN-EILSMTCVKNSIWVSTT-------NGLWIIDRKTMDARQQN-MTNKRFTSLLF 604 (758)
T ss_dssp --TEEEEECC--CCCCBCCCCC---C-CEEEEEEETTEEEEEES-------SCEEEEETTTCCEEEC---CCCCCSEEEE
T ss_pred --CceEEEecCCCceEEecccCCCcc-ceEEEEECCCCEEEECC-------CCeEEEcCCCceeEEec-CCCCceeeeEE
Confidence 24889999988876553 33322 23344445788988763 56899999998877653 23222222222
Q ss_pred EE-CCEEEEEcccCCCceeeeEEEEECCC
Q psy14726 582 VI-DDMIFAIGGFNGVTTIYHVECYDEKT 609 (712)
Q Consensus 582 ~~-~~~i~v~GG~~~~~~~~~v~~yd~~~ 609 (712)
.. +|.|| +||.+| +-.|||+.
T Consensus 605 ~~~~G~l~-fG~~~G------l~~f~p~~ 626 (758)
T 3ott_A 605 DPKEDCVY-LGGADG------FGISHSNL 626 (758)
T ss_dssp ETTTTEEE-EECBSE------EEEEEC--
T ss_pred ECCCCcEE-EecCCc------eEEEChhh
Confidence 22 45554 566543 56777764
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.02 E-value=0.53 Score=47.74 Aligned_cols=234 Identities=10% Similarity=0.058 Sum_probs=111.3
Q ss_pred eEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCc----
Q psy14726 349 ILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKV---- 423 (712)
Q Consensus 349 ~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~---- 423 (712)
..++.|+. ...+..||..+++....-. ....-.+++.. ++..++.|+.+.......+..||..+..
T Consensus 87 ~~l~s~~~-----dg~i~iwd~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~ 157 (369)
T 3zwl_B 87 KYCVTGSA-----DYSIKLWDVSNGQCVATWK----SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHE 157 (369)
T ss_dssp SEEEEEET-----TTEEEEEETTTCCEEEEEE----CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCC
T ss_pred CEEEEEeC-----CCeEEEEECCCCcEEEEee----cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCcccee
Confidence 34555553 2368888988776554211 11222233333 5566666654322223567777766543
Q ss_pred EEEeCCCCC-------C-cceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCC-CceEEcccCCccccceeEEEE--CC
Q psy14726 424 WKEIAPMNF-------K-RCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTE-NQWSLIAPMNVERSDASATTL--QG 491 (712)
Q Consensus 424 W~~~~~~~~-------~-r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~-~~W~~~~~~p~~r~~~~~~~~--~~ 491 (712)
+......+. . ..-.+++. .+++.+++|+.+ ..+..||..+ .+-.. .+.........+.+ ++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~--~~~~~~~~v~~~~~~~~~ 230 (369)
T 3zwl_B 158 LTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKD-----GKISKYDVSNNYEYVD--SIDLHEKSISDMQFSPDL 230 (369)
T ss_dssp EEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETT-----SEEEEEETTTTTEEEE--EEECCSSCEEEEEECTTS
T ss_pred ecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCC-----CEEEEEECCCCcEeEE--EEecCCCceeEEEECCCC
Confidence 222111110 0 01122222 355666777643 4689999887 33221 11111122222333 66
Q ss_pred EEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCC---------ccceEEEEeCCC
Q psy14726 492 KIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMS---------RMCNGEKYNPVT 562 (712)
Q Consensus 492 ~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~---------~~~~v~~yd~~~ 562 (712)
..++.|+.+ ..+..||..+.+....-..+.+ ....+..-++..+++|+.++.. ....+..||..+
T Consensus 231 ~~l~~~~~d-----~~i~v~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 304 (369)
T 3zwl_B 231 TYFITSSRD-----TNSFLVDVSTLQVLKKYETDCP-LNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIF 304 (369)
T ss_dssp SEEEEEETT-----SEEEEEETTTCCEEEEEECSSC-EEEEEECSSSSEEEEEECCC-------------CEEEEEETTT
T ss_pred CEEEEecCC-----ceEEEEECCCCceeeeecCCCC-ceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCC
Confidence 677777655 3688899887664333221111 1111222245555555533211 112678888776
Q ss_pred CcEEEcCCCCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 563 KTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 563 ~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
.+-... +.........+.+ ++++++.||.++ .+.+||..++.
T Consensus 305 ~~~~~~--~~~~~~~v~~~~~s~~~~~l~s~~~dg-----~v~iw~~~~~~ 348 (369)
T 3zwl_B 305 EEEIGR--VQGHFGPLNTVAISPQGTSYASGGEDG-----FIRLHHFEKSY 348 (369)
T ss_dssp CCEEEE--EECCSSCEEEEEECTTSSEEEEEETTS-----EEEEEEECHHH
T ss_pred Ccchhh--eecccCcEEEEEECCCCCEEEEEcCCC-----eEEEEECcccc
Confidence 543222 1111112222333 677888888765 56777766543
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=96.01 E-value=0.22 Score=52.35 Aligned_cols=146 Identities=9% Similarity=0.126 Sum_probs=77.8
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 474 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 474 (712)
++.+++.||.+ ..+..||..+++....-..... .-.+++. .++++++.||.+ ..+..||..+.+- +
T Consensus 119 ~~~~l~s~s~D-----g~i~vwd~~~~~~~~~l~~h~~-~V~~v~~~~~~~~l~sgs~D-----~~i~iwd~~~~~~--~ 185 (410)
T 1vyh_C 119 VFSVMVSASED-----ATIKVWDYETGDFERTLKGHTD-SVQDISFDHSGKLLASCSAD-----MTIKLWDFQGFEC--I 185 (410)
T ss_dssp SSSEEEEEESS-----SCEEEEETTTCCCCEEECCCSS-CEEEEEECTTSSEEEEEETT-----SCCCEEETTSSCE--E
T ss_pred CCCEEEEEeCC-----CeEEEEECCCCcEEEEEeccCC-cEEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCCce--e
Confidence 34567777754 3588899887764322111111 1122222 356788888755 3577788766543 2
Q ss_pred ccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--CCEEEEEcCCCCCC
Q psy14726 475 APMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMS 550 (712)
Q Consensus 475 ~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~ 550 (712)
..+..-.....++.+ ++..++.||.+ ..+..||..++.-... +.........+.. ++.+++.|+.+
T Consensus 186 ~~~~~h~~~V~~v~~~p~~~~l~s~s~D-----~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~g~~l~s~s~D--- 255 (410)
T 1vyh_C 186 RTMHGHDHNVSSVSIMPNGDHIVSASRD-----KTIKMWEVQTGYCVKT--FTGHREWVRMVRPNQDGTLIASCSND--- 255 (410)
T ss_dssp ECCCCCSSCEEEEEECSSSSEEEEEETT-----SEEEEEETTTCCEEEE--EECCSSCEEEEEECTTSSEEEEEETT---
T ss_pred EEEcCCCCCEEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCcEEEE--EeCCCccEEEEEECCCCCEEEEEcCC---
Confidence 222211112223333 56677777765 3688889887753221 1111112222222 56777777754
Q ss_pred ccceEEEEeCCCCcEE
Q psy14726 551 RMCNGEKYNPVTKTWS 566 (712)
Q Consensus 551 ~~~~v~~yd~~~~~W~ 566 (712)
..+..||..+....
T Consensus 256 --~~v~vwd~~~~~~~ 269 (410)
T 1vyh_C 256 --QTVRVWVVATKECK 269 (410)
T ss_dssp --SCEEEEETTTCCEE
T ss_pred --CeEEEEECCCCcee
Confidence 46778888776543
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=95.98 E-value=0.19 Score=50.11 Aligned_cols=195 Identities=7% Similarity=0.036 Sum_probs=101.1
Q ss_pred CCEEEEEeecC--CCCccceEEEEECCCCcEEEeCCC---CCCcceeEEEE-EC-CeEEEEcccCCCCCCceeEEeecCC
Q psy14726 396 GYNIYVIGGFD--GNEYYNSCRCFNAVTKVWKEIAPM---NFKRCYVSTAV-HH-DVIYAMGGYNGQRRQNSVEKYNYTE 468 (712)
Q Consensus 396 ~~~lyv~GG~~--~~~~~~~v~~yd~~~~~W~~~~~~---~~~r~~~~~~~-~~-~~iyv~GG~~~~~~~~~v~~yd~~~ 468 (712)
++.+|+.++.. .......+++||+.++++..+... .....-++++. -+ |++|+.+.. +.+.+||+.
T Consensus 28 ~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~------~~l~~~d~~- 100 (314)
T 1pjx_A 28 NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR------LGLLVVQTD- 100 (314)
T ss_dssp TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT------TEEEEEETT-
T ss_pred CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC------CCEEEEeCC-
Confidence 56777771000 001124689999999988765431 01112234444 34 788887541 368999998
Q ss_pred CceEEc-ccCCcc--ccceeEEEE--CCEEEEEcccCC----------CCccCceEEeeCCCCeeEEeC-CCCCCCcceE
Q psy14726 469 NQWSLI-APMNVE--RSDASATTL--QGKIYITGGFNG----------HNCLNSCEVYDPECNQWTLIE-PMRHRRSGVS 532 (712)
Q Consensus 469 ~~W~~~-~~~p~~--r~~~~~~~~--~~~iyv~GG~~~----------~~~~~~v~~yd~~~~~W~~~~-~~p~~r~~~~ 532 (712)
++...+ ...... ........+ +|++|+.....+ ......+++||+. .+...+. .... ..+
T Consensus 101 g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~---~~~ 176 (314)
T 1pjx_A 101 GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQF---PNG 176 (314)
T ss_dssp SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESS---EEE
T ss_pred CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCC---cce
Confidence 776655 332211 111222333 678998764321 1123578999987 5555442 1111 123
Q ss_pred EEEE-----CC-EEEEEcCCCCCCccceEEEEeCC-CCcEEE---cCCCCCC--ccceEEEEE-CCEEEEEcccCCCcee
Q psy14726 533 CIAY-----HE-CIYVIGGFNGMSRMCNGEKYNPV-TKTWSQ---VPDMYNP--RSNFAIEVI-DDMIFAIGGFNGVTTI 599 (712)
Q Consensus 533 ~~~~-----~~-~iyv~GG~~~~~~~~~v~~yd~~-~~~W~~---~~~~p~~--r~~~~~~~~-~~~i~v~GG~~~~~~~ 599 (712)
.+.. ++ .||+.... ...+++||+. +.++.. ...++.. ..-.+++.- ++.+|+....+
T Consensus 177 i~~~~~~d~dg~~l~v~~~~-----~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~----- 246 (314)
T 1pjx_A 177 IAVRHMNDGRPYQLIVAETP-----TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGS----- 246 (314)
T ss_dssp EEEEECTTSCEEEEEEEETT-----TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETT-----
T ss_pred EEEecccCCCCCEEEEEECC-----CCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCC-----
Confidence 3333 34 57777532 2578889875 443321 1112211 111223332 67888874322
Q ss_pred eeEEEEECCCCe
Q psy14726 600 YHVECYDEKTDE 611 (712)
Q Consensus 600 ~~v~~yd~~~~~ 611 (712)
..+.+||+++++
T Consensus 247 ~~i~~~d~~~g~ 258 (314)
T 1pjx_A 247 SHIEVFGPDGGQ 258 (314)
T ss_dssp TEEEEECTTCBS
T ss_pred CEEEEEcCCCCc
Confidence 268899998554
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=95.95 E-value=1.4 Score=48.67 Aligned_cols=117 Identities=16% Similarity=0.200 Sum_probs=69.6
Q ss_pred EEEECCEEEEEeecCCCCccceEEEEECCCCc--EEEeCCCCCC---cc---eeEEEEECCeEEEEcccCCCCCCceeEE
Q psy14726 392 TAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKV--WKEIAPMNFK---RC---YVSTAVHHDVIYAMGGYNGQRRQNSVEK 463 (712)
Q Consensus 392 ~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~~~~---r~---~~~~~~~~~~iyv~GG~~~~~~~~~v~~ 463 (712)
-++.++.||+.++. ..++.+|..+++ |+.-...+.. .+ ..+.++.+++||+... ...++.
T Consensus 64 P~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~------dg~l~A 131 (582)
T 1flg_A 64 AIVSDGVIYVTASY------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL------DASVVA 131 (582)
T ss_dssp CEEETTEEEEEETT------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET------TTEEEE
T ss_pred cEEECCEEEEEcCC------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC------CCEEEE
Confidence 35569999988653 249999998876 8765433321 11 1344568899988532 246999
Q ss_pred eecCCCc--eEEcccCCccc--cceeEEEECC------EEEEEcccCC-CCccCceEEeeCCCCe--eEEe
Q psy14726 464 YNYTENQ--WSLIAPMNVER--SDASATTLQG------KIYITGGFNG-HNCLNSCEVYDPECNQ--WTLI 521 (712)
Q Consensus 464 yd~~~~~--W~~~~~~p~~r--~~~~~~~~~~------~iyv~GG~~~-~~~~~~v~~yd~~~~~--W~~~ 521 (712)
+|..|.+ |+.-..-+... ...+-++.++ .||+ |...+ ......+..||.++++ |+.-
T Consensus 132 lD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~v-g~~~~e~~~~g~v~alD~~tG~~~W~~~ 201 (582)
T 1flg_A 132 LNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIH-GSSGDEFGVVGRLFARDPDTGEEIWMRP 201 (582)
T ss_dssp EESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEE-CCBCGGGCCBCEEEEECTTTCCEEEEEE
T ss_pred EECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEE-eccccccCCCCEEEEEECCCCCEEeecC
Confidence 9998875 87543221111 1122344566 6665 33211 1224579999998876 8653
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=95.93 E-value=0.55 Score=47.11 Aligned_cols=227 Identities=10% Similarity=0.077 Sum_probs=107.2
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEE
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 426 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 426 (712)
+..++.|+.+ ..+..++............. .......... ++..++.|+.++ .+..+|.....-..
T Consensus 98 g~~l~s~~~d-----~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~s~s~d~-----~~~~~d~~~~~~~~ 164 (340)
T 4aow_A 98 GQFALSGSWD-----GTLRLWDLTTGTTTRRFVGH---TKDVLSVAFSSDNRQIVSGSRDK-----TIKLWNTLGVCKYT 164 (340)
T ss_dssp SSEEEEEETT-----SEEEEEETTTTEEEEEEECC---SSCEEEEEECTTSSCEEEEETTS-----CEEEECTTSCEEEE
T ss_pred CCEEEEEccc-----ccceEEeecccceeeeecCC---CCceeEEEEeecCccceeecCCC-----eEEEEEeCCCceEE
Confidence 3345555532 34666776666554421111 1111122222 455666666543 46677776554333
Q ss_pred eCCCCCCcceeEEEEE---CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCC
Q psy14726 427 IAPMNFKRCYVSTAVH---HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNG 501 (712)
Q Consensus 427 ~~~~~~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~ 501 (712)
.........-..++.. .+.+++.||.+ ..+..||..+.+....-.... ....++.+ ++++++.||.++
T Consensus 165 ~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d-----~~i~i~d~~~~~~~~~~~~h~--~~v~~~~~s~~~~~l~s~s~Dg 237 (340)
T 4aow_A 165 VQDESHSEWVSCVRFSPNSSNPIIVSCGWD-----KLVKVWNLANCKLKTNHIGHT--GYLNTVTVSPDGSLCASGGKDG 237 (340)
T ss_dssp ECSSSCSSCEEEEEECSCSSSCEEEEEETT-----SCEEEEETTTTEEEEEECCCS--SCEEEEEECTTSSEEEEEETTC
T ss_pred EEeccccCcccceEEccCCCCcEEEEEcCC-----CEEEEEECCCCceeeEecCCC--CcEEEEEECCCCCEEEEEeCCC
Confidence 2222111111122221 23566666643 357888888766433211111 11122233 677888887664
Q ss_pred CCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEc-C-CCC-----CC
Q psy14726 502 HNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQV-P-DMY-----NP 574 (712)
Q Consensus 502 ~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~-~~p-----~~ 574 (712)
.+..||..+.+-... +.....-.+++...+..++.|+.+ ..+..||..+..-... . ... ..
T Consensus 238 -----~i~iwd~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~h 305 (340)
T 4aow_A 238 -----QAMLWDLNEGKHLYT--LDGGDIINALCFSPNRYWLCAATG-----PSIKIWDLEGKIIVDELKQEVISTSSKAE 305 (340)
T ss_dssp -----EEEEEETTTTEEEEE--EECSSCEEEEEECSSSSEEEEEET-----TEEEEEETTTTEEEEEECCC-------CC
T ss_pred -----eEEEEEeccCceeee--ecCCceEEeeecCCCCceeeccCC-----CEEEEEECCCCeEEEeccccceeeeccCC
Confidence 577888876653222 221122223333344445555543 4678888876643221 1 110 00
Q ss_pred ccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 575 RSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 575 r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
......+.+ +++.++.||.++ .|.+||.++++
T Consensus 306 ~~~v~~l~~s~dg~~l~sgs~Dg-----~v~iW~~~tGt 339 (340)
T 4aow_A 306 PPQCTSLAWSADGQTLFAGYTDN-----LVRVWQVTIGT 339 (340)
T ss_dssp CCCEEEEEECTTSSEEEEEETTS-----CEEEEEEEC--
T ss_pred CCCEEEEEECCCCCEEEEEeCCC-----EEEEEeCCCcC
Confidence 111122223 677888888776 57788877653
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=95.91 E-value=0.4 Score=48.37 Aligned_cols=200 Identities=11% Similarity=0.003 Sum_probs=105.8
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 474 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 474 (712)
++.+|+.+..+ ..+++||+.++++..+...+ ...-.+++. -+|++|+.+... ......+++||+.+.....+
T Consensus 55 ~g~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~~-~~~~~~i~~~~dg~l~v~~~~~-~~~~~~i~~~d~~~~~~~~~ 127 (333)
T 2dg1_A 55 QGQLFLLDVFE-----GNIFKINPETKEIKRPFVSH-KANPAAIKIHKDGRLFVCYLGD-FKSTGGIFAATENGDNLQDI 127 (333)
T ss_dssp TSCEEEEETTT-----CEEEEECTTTCCEEEEEECS-SSSEEEEEECTTSCEEEEECTT-SSSCCEEEEECTTSCSCEEE
T ss_pred CCCEEEEECCC-----CEEEEEeCCCCcEEEEeeCC-CCCcceEEECCCCcEEEEeCCC-CCCCceEEEEeCCCCEEEEE
Confidence 56788776532 46899999999887654221 122334444 367888875322 11225799999998876533
Q ss_pred -ccCCccccceeEEEE--CCEEEEEcccC-CCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CC-EEEEEcCCCC
Q psy14726 475 -APMNVERSDASATTL--QGKIYITGGFN-GHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HE-CIYVIGGFNG 548 (712)
Q Consensus 475 -~~~p~~r~~~~~~~~--~~~iyv~GG~~-~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~ 548 (712)
...... .......+ ++++|+..... .......++++|+.+.+...+..-. ....+.+.. ++ .||+....
T Consensus 128 ~~~~~~~-~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~i~~~~dg~~l~v~~~~-- 202 (333)
T 2dg1_A 128 IEDLSTA-YCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNI--SVANGIALSTDEKVLWVTETT-- 202 (333)
T ss_dssp ECSSSSC-CCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEE--SSEEEEEECTTSSEEEEEEGG--
T ss_pred EccCccC-CcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCC--CcccceEECCCCCEEEEEeCC--
Confidence 222211 12222333 67888865321 1122357999999887766543110 111223222 34 58887532
Q ss_pred CCccceEEEEeCCC--CcEEEcC-----CCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCeEEEc
Q psy14726 549 MSRMCNGEKYNPVT--KTWSQVP-----DMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 549 ~~~~~~v~~yd~~~--~~W~~~~-----~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
...+++||+.+ .....+. ..+......+++.- ++.+|+....+ ..+.+||++...-..+
T Consensus 203 ---~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~-----~~v~~~d~~g~~~~~~ 269 (333)
T 2dg1_A 203 ---ANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQ-----GRVLVFNKRGYPIGQI 269 (333)
T ss_dssp ---GTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETT-----TEEEEECTTSCEEEEE
T ss_pred ---CCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCC-----CEEEEECCCCCEEEEE
Confidence 35789999854 2333211 11111111223332 57787764322 2688999965544333
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=95.89 E-value=0.54 Score=49.46 Aligned_cols=202 Identities=12% Similarity=-0.011 Sum_probs=108.8
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEE-EECCeEEEEcccCCCCCCceeEEeecCCCceEEc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTA-VHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 474 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 474 (712)
++++...+...+......++.+|.....-..+..-.. . -.+.+ .-+|+.+++++..+ ....++.+|+.+.+...+
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~-~-v~~~~~Spdg~~la~~s~~~--~~~~i~~~d~~tg~~~~l 218 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQ-P-LMSPAWSPDGSKLAYVTFES--GRSALVIQTLANGAVRQV 218 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESS-C-EEEEEECTTSSEEEEEECTT--SSCEEEEEETTTCCEEEE
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCC-c-ceeeEEcCCCCEEEEEEecC--CCcEEEEEECCCCcEEEe
Confidence 3455444443222223678999987665444432111 1 12222 23666666665432 236899999999887766
Q ss_pred ccCCccccceeEEEE--CCE-EEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--CCEEEEEcCCCCC
Q psy14726 475 APMNVERSDASATTL--QGK-IYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGM 549 (712)
Q Consensus 475 ~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~ 549 (712)
...+. ...+..+ +|+ |++.+..++ ...++.+|..+++...+...+. ....... +++.+++++..+
T Consensus 219 ~~~~~---~~~~~~~spdg~~la~~~~~~g---~~~i~~~d~~~~~~~~l~~~~~---~~~~~~~spdg~~l~~~s~~~- 288 (415)
T 2hqs_A 219 ASFPR---HNGAPAFSPDGSKLAFALSKTG---SLNLYVMDLASGQIRQVTDGRS---NNTEPTWFPDSQNLAFTSDQA- 288 (415)
T ss_dssp ECCSS---CEEEEEECTTSSEEEEEECTTS---SCEEEEEETTTCCEEECCCCSS---CEEEEEECTTSSEEEEEECTT-
T ss_pred ecCCC---cccCEEEcCCCCEEEEEEecCC---CceEEEEECCCCCEEeCcCCCC---cccceEECCCCCEEEEEECCC-
Confidence 54332 2223333 554 554554332 2569999999988766654321 1222222 555444443211
Q ss_pred CccceEEEEeCCCCcEEEcCCCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCeEEEcc
Q psy14726 550 SRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEAT 616 (712)
Q Consensus 550 ~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 616 (712)
....++.+|..+.+-..+... .....+.+.. +++.+++++.++. ...++++|+.+++...+.
T Consensus 289 -g~~~i~~~d~~~~~~~~l~~~--~~~~~~~~~spdG~~l~~~~~~~g--~~~i~~~d~~~~~~~~l~ 351 (415)
T 2hqs_A 289 -GRPQVYKVNINGGAPQRITWE--GSQNQDADVSSDGKFMVMVSSNGG--QQHIAKQDLATGGVQVLS 351 (415)
T ss_dssp -SSCEEEEEETTSSCCEECCCS--SSEEEEEEECTTSSEEEEEEECSS--CEEEEEEETTTCCEEECC
T ss_pred -CCcEEEEEECCCCCEEEEecC--CCcccCeEECCCCCEEEEEECcCC--ceEEEEEECCCCCEEEec
Confidence 135789999988765554321 1111222222 5655555554322 247899999999887664
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=95.89 E-value=0.46 Score=48.25 Aligned_cols=105 Identities=14% Similarity=0.091 Sum_probs=56.7
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE--CCEEEEEeecCCCCccceEEEEECCCCcEE
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKVWK 425 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~ 425 (712)
+.+++.|+.+ ..+..||..+++-...-.. ....-.+++.. ++.+++.|+.+ ..+..||..+++-.
T Consensus 85 ~~~l~~~~~d-----g~i~v~d~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~ 151 (366)
T 3k26_A 85 HPLLAVAGSR-----GIIRIINPITMQCIKHYVG---HGNAINELKFHPRDPNLLLSVSKD-----HALRLWNIQTDTLV 151 (366)
T ss_dssp CEEEEEEETT-----CEEEEECTTTCCEEEEEES---CCSCEEEEEECSSCTTEEEEEETT-----SCEEEEETTTTEEE
T ss_pred CCEEEEecCC-----CEEEEEEchhceEeeeecC---CCCcEEEEEECCCCCCEEEEEeCC-----CeEEEEEeecCeEE
Confidence 3456666642 3688888877654431111 11122233333 56777787754 35899999887654
Q ss_pred Ee-CCCCCCcce-eEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCc
Q psy14726 426 EI-APMNFKRCY-VSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQ 470 (712)
Q Consensus 426 ~~-~~~~~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 470 (712)
.. ..+...... .+++. -++..++.||.+ ..+..||..+.+
T Consensus 152 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~ 194 (366)
T 3k26_A 152 AIFGGVEGHRDEVLSADYDLLGEKIMSCGMD-----HSLKLWRINSKR 194 (366)
T ss_dssp EEECSTTSCSSCEEEEEECTTSSEEEEEETT-----SCEEEEESCSHH
T ss_pred EEecccccccCceeEEEECCCCCEEEEecCC-----CCEEEEECCCCc
Confidence 33 222222222 22332 246677777754 458888877653
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=95.87 E-value=0.95 Score=45.34 Aligned_cols=230 Identities=8% Similarity=0.018 Sum_probs=107.4
Q ss_pred ceEEEEECC-CCcEEEcccCCCCCCCcceEEEEE-CC-EEEEEeecCCCCccceEEEEECC--CCcEEEeCCCCCCccee
Q psy14726 363 DFVETYDTR-ADRWVKIEQVDPMGPRAYHGTAVI-GY-NIYVIGGFDGNEYYNSCRCFNAV--TKVWKEIAPMNFKRCYV 437 (712)
Q Consensus 363 ~~v~~~d~~-~~~W~~~~~~~~~~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~v~~yd~~--~~~W~~~~~~~~~r~~~ 437 (712)
..+..||.. ++.+..+.... ....-.++++. ++ .+|+.+. .. ..+..|+.. ++++..+..++....-.
T Consensus 15 ~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~spdg~~l~~~~~-~~----~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (343)
T 1ri6_A 15 QQIHVWNLNHEGALTLTQVVD--VPGQVQPMVVSPDKRYLYVGVR-PE----FRVLAYRIAPDDGALTFAAESALPGSLT 87 (343)
T ss_dssp TEEEEEEECTTSCEEEEEEEE--CSSCCCCEEECTTSSEEEEEET-TT----TEEEEEEECTTTCCEEEEEEEECSSCCS
T ss_pred CeEEEEEECCCCcEEEeeeEe--cCCCCceEEECCCCCEEEEeec-CC----CeEEEEEecCCCCceeeccccccCCCCc
Confidence 357777764 34443321111 11112233333 44 4555443 21 456776665 77877654443222223
Q ss_pred EEEE-ECCe-EEEEcccCCCCCCceeEEeecCCC-ceEEcccCCccccceeEEEE-CC-EEEEEcccCCCCccCceEEee
Q psy14726 438 STAV-HHDV-IYAMGGYNGQRRQNSVEKYNYTEN-QWSLIAPMNVERSDASATTL-QG-KIYITGGFNGHNCLNSCEVYD 512 (712)
Q Consensus 438 ~~~~-~~~~-iyv~GG~~~~~~~~~v~~yd~~~~-~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd 512 (712)
.++. -+++ +|+.+.. ...+.+||.... ....+...+....-++++.- ++ .+|+.+..+ ..+.+||
T Consensus 88 ~~~~s~dg~~l~~~~~~-----~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-----~~v~~~d 157 (343)
T 1ri6_A 88 HISTDHQGQFVFVGSYN-----AGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQ-----DRICLFT 157 (343)
T ss_dssp EEEECTTSSEEEEEETT-----TTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGG-----TEEEEEE
T ss_pred EEEEcCCCCEEEEEecC-----CCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCC-----CEEEEEE
Confidence 3333 3444 6655432 245888887422 22222222222222223332 33 677765332 4688999
Q ss_pred CCC-CeeEEeC----CCCCCCcceEEEEE-CC-EEEEEcCCCCCCccceEEEEeCC--CCcEEE---cCCCCCC---ccc
Q psy14726 513 PEC-NQWTLIE----PMRHRRSGVSCIAY-HE-CIYVIGGFNGMSRMCNGEKYNPV--TKTWSQ---VPDMYNP---RSN 577 (712)
Q Consensus 513 ~~~-~~W~~~~----~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~--~~~W~~---~~~~p~~---r~~ 577 (712)
..+ ++...+. ..+....-..++.. ++ .+|+.+.. ...+..||.. +.++.. +...+.. ...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~-----~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 232 (343)
T 1ri6_A 158 VSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNEL-----NSSVDVWELKDPHGNIECVQTLDMMPENFSDTRW 232 (343)
T ss_dssp ECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETT-----TTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCC
T ss_pred ecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCC-----CCEEEEEEecCCCCcEEEEeeccccCccccccCC
Confidence 887 6665332 11211111122222 34 57777643 2568888874 344432 2323322 112
Q ss_pred eEEEEE--CC-EEEEEcccCCCceeeeEEEEECC--CCeEEEccCCC
Q psy14726 578 FAIEVI--DD-MIFAIGGFNGVTTIYHVECYDEK--TDEWYEATDMN 619 (712)
Q Consensus 578 ~~~~~~--~~-~i~v~GG~~~~~~~~~v~~yd~~--~~~W~~~~~~p 619 (712)
...+.+ ++ .+|+.++.+ ..+.+||+. ++++..+..++
T Consensus 233 ~~~i~~s~dg~~l~v~~~~~-----~~i~v~d~~~~~~~~~~~~~~~ 274 (343)
T 1ri6_A 233 AADIHITPDGRHLYACDRTA-----SLITVFSVSEDGSVLSKEGFQP 274 (343)
T ss_dssp EEEEEECTTSSEEEEEETTT-----TEEEEEEECTTSCCEEEEEEEE
T ss_pred ccceEECCCCCEEEEEecCC-----CEEEEEEEcCCCCceEEeeeec
Confidence 222333 34 566665433 257777776 56676664443
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=95.86 E-value=0.39 Score=49.61 Aligned_cols=109 Identities=12% Similarity=0.088 Sum_probs=56.3
Q ss_pred CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCC-cc---ccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCC
Q psy14726 443 HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMN-VE---RSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECN 516 (712)
Q Consensus 443 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p-~~---r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~ 516 (712)
++ +++.|+.+ ..+..||..+.+....-... .. ......+.+ ++++++.|+.++ ....+..||..+.
T Consensus 197 ~~-~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~--~~g~i~i~d~~~~ 268 (397)
T 1sq9_A 197 RG-LIATGFNN-----GTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSN--SFGCITLYETEFG 268 (397)
T ss_dssp TS-EEEEECTT-----SEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEET--TEEEEEEEETTTC
T ss_pred Cc-eEEEEeCC-----CcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCC--CCceEEEEECCCC
Confidence 45 66666643 46889998876543221110 01 122223333 567777776541 1146888998776
Q ss_pred eeEEe-CCCC--C--------CCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCc
Q psy14726 517 QWTLI-EPMR--H--------RRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKT 564 (712)
Q Consensus 517 ~W~~~-~~~p--~--------~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 564 (712)
+-... ...+ . .......+.+ ++.+++.|+.+ ..+..||..+.+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~ 324 (397)
T 1sq9_A 269 ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWD-----GKLRFWDVKTKE 324 (397)
T ss_dssp CEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETT-----SEEEEEETTTTE
T ss_pred cccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCC-----CeEEEEEcCCCc
Confidence 53221 1100 0 1122222233 46667777653 478899987764
|
| >2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} | Back alignment and structure |
|---|
Probab=95.76 E-value=1.9 Score=43.44 Aligned_cols=220 Identities=10% Similarity=0.118 Sum_probs=115.8
Q ss_pred EEEEECCCCcEEEcccCCCCCCCcceEEEEECCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCC-CCcceeEEE-EE
Q psy14726 365 VETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMN-FKRCYVSTA-VH 442 (712)
Q Consensus 365 v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~-~~r~~~~~~-~~ 442 (712)
++.-.-....|..+............++.+.++.+|++|.. ..+++-+-.-.+|+.+.... .+-....++ .-
T Consensus 58 i~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~------g~i~~S~DgG~tW~~~~~~~~~~~~~~~i~~~~ 131 (327)
T 2xbg_A 58 LMETRDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGEP------PIMLHTTDGGQSWSQIPLDPKLPGSPRLIKALG 131 (327)
T ss_dssp EEEESSTTSSCEECCCCCSCCCCEEEEEEEETTEEEEEEET------TEEEEESSTTSSCEECCCCTTCSSCEEEEEEEE
T ss_pred EEEeCCCCCCCeECCCCCCCCCccEEEEEecCCeEEEEECC------CeEEEECCCCCCceECccccCCCCCeEEEEEEC
Confidence 44333344689985322111122334555557888887532 23555433457899876432 222223343 34
Q ss_pred CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE-CCEEEEEcccCCCCccCceEEee-CCCCeeEE
Q psy14726 443 HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL-QGKIYITGGFNGHNCLNSCEVYD-PECNQWTL 520 (712)
Q Consensus 443 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd-~~~~~W~~ 520 (712)
++.+|+.|.. ..+++-+-...+|+.+.... ...-++++.. ++.+|++|. .+ .+++-+ ..-.+|+.
T Consensus 132 ~~~~~~~~~~------g~v~~S~DgG~tW~~~~~~~-~~~~~~~~~~~~~~~~~~g~-~G-----~~~~S~d~gG~tW~~ 198 (327)
T 2xbg_A 132 NGSAEMITNV------GAIYRTKDSGKNWQALVQEA-IGVMRNLNRSPSGEYVAVSS-RG-----SFYSTWEPGQTAWEP 198 (327)
T ss_dssp TTEEEEEETT------CCEEEESSTTSSEEEEECSC-CCCEEEEEECTTSCEEEEET-TS-----SEEEEECTTCSSCEE
T ss_pred CCCEEEEeCC------ccEEEEcCCCCCCEEeecCC-CcceEEEEEcCCCcEEEEEC-CC-----cEEEEeCCCCCceeE
Confidence 6788887742 23555444567899885432 2222333333 566776653 21 244443 33578998
Q ss_pred eCCCCCCCcceEEEEE-CCEEEEEcCCCCCCccceEEEEeCC-CCcEEEcCCC--CCCccceEEEEE-CCEEEEEcccCC
Q psy14726 521 IEPMRHRRSGVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPV-TKTWSQVPDM--YNPRSNFAIEVI-DDMIFAIGGFNG 595 (712)
Q Consensus 521 ~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~-~~~W~~~~~~--p~~r~~~~~~~~-~~~i~v~GG~~~ 595 (712)
+.. +.+...+.++.. ++.+|+++.. ..++..+.. -.+|+.+... +.....++++.. ++.+|++|+..
T Consensus 199 ~~~-~~~~~~~~~~~~~~g~~~~~~~~------G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g- 270 (327)
T 2xbg_A 199 HNR-TTSRRLHNMGFTPDGRLWMIVNG------GKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAG- 270 (327)
T ss_dssp EEC-CSSSCEEEEEECTTSCEEEEETT------TEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTT-
T ss_pred CCC-CCCCccceeEECCCCCEEEEeCC------ceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCC-
Confidence 853 333344444432 5788887642 234554333 5689987532 332223344433 67888887632
Q ss_pred CceeeeEEEEECCCCeEEEcc
Q psy14726 596 VTTIYHVECYDEKTDEWYEAT 616 (712)
Q Consensus 596 ~~~~~~v~~yd~~~~~W~~~~ 616 (712)
.+++-.-...+|+.+.
T Consensus 271 -----~i~~S~DgG~tW~~~~ 286 (327)
T 2xbg_A 271 -----ALLCSQDGGQTWQQDV 286 (327)
T ss_dssp -----CEEEESSTTSSCEECG
T ss_pred -----eEEEeCCCCcccEEcC
Confidence 2333333457999885
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=95.76 E-value=0.63 Score=47.65 Aligned_cols=188 Identities=16% Similarity=0.183 Sum_probs=95.9
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA 475 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 475 (712)
++..++.||.+ ..+..+|..+.+....-..+...........++..++.||.+ ..+..|+.....-....
T Consensus 75 d~~~l~s~s~D-----g~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d-----~~i~v~~~~~~~~~~~~ 144 (354)
T 2pbi_B 75 DKRRIVSSSQD-----GKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLD-----NKCSVYPLTFDKNENMA 144 (354)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTT-----SEEEEEECCCCTTCCSG
T ss_pred CCCEEEEEeCC-----CeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCC-----CCEEEEEEecccccccc
Confidence 44556667654 357788877766543333332222222233467788888864 34666665433111000
Q ss_pred ----cCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE----CCEEEEEcC
Q psy14726 476 ----PMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY----HECIYVIGG 545 (712)
Q Consensus 476 ----~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~----~~~iyv~GG 545 (712)
.+..-.....++.+ ++..++.|+.+ .++..||.++++-...- ........++.+ ++..++.|+
T Consensus 145 ~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D-----~~v~lwd~~~~~~~~~~--~~h~~~v~~~~~~~~~~g~~l~sgs 217 (354)
T 2pbi_B 145 AKKKSVAMHTNYLSACSFTNSDMQILTASGD-----GTCALWDVESGQLLQSF--HGHGADVLCLDLAPSETGNTFVSGG 217 (354)
T ss_dssp GGCEEEEECSSCEEEEEECSSSSEEEEEETT-----SEEEEEETTTCCEEEEE--ECCSSCEEEEEECCCSSCCEEEEEE
T ss_pred ccceeeeccCCcEEEEEEeCCCCEEEEEeCC-----CcEEEEeCCCCeEEEEE--cCCCCCeEEEEEEeCCCCCEEEEEe
Confidence 00000011122222 44455566554 46888898877643221 111111122222 356777777
Q ss_pred CCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCeE
Q psy14726 546 FNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEW 612 (712)
Q Consensus 546 ~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 612 (712)
.+ ..+..||..+.+....-.. .......+.+ ++..++.||.++ .+.+||..++.-
T Consensus 218 ~D-----g~v~~wd~~~~~~~~~~~~--h~~~v~~v~~~p~~~~l~s~s~D~-----~v~lwd~~~~~~ 274 (354)
T 2pbi_B 218 CD-----KKAMVWDMRSGQCVQAFET--HESDVNSVRYYPSGDAFASGSDDA-----TCRLYDLRADRE 274 (354)
T ss_dssp TT-----SCEEEEETTTCCEEEEECC--CSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEE
T ss_pred CC-----CeEEEEECCCCcEEEEecC--CCCCeEEEEEeCCCCEEEEEeCCC-----eEEEEECCCCcE
Confidence 64 4688999988765433211 1111222333 677888888765 578889887653
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=95.75 E-value=0.38 Score=48.39 Aligned_cols=188 Identities=10% Similarity=0.013 Sum_probs=98.0
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE-ECC-eEEEEcccCCCCCCceeEEeecCCCce-E
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-HHD-VIYAMGGYNGQRRQNSVEKYNYTENQW-S 472 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W-~ 472 (712)
++.+|+.++. ...+..||+.+++.......+.... .++. -++ .+|+.+... ..+++||+.+.+. .
T Consensus 9 ~~~~~v~~~~-----~~~v~~~d~~~~~~~~~~~~~~~~~--~~~~s~dg~~l~~~~~~~-----~~i~~~d~~~~~~~~ 76 (331)
T 3u4y_A 9 SNFGIVVEQH-----LRRISFFSTDTLEILNQITLGYDFV--DTAITSDCSNVVVTSDFC-----QTLVQIETQLEPPKV 76 (331)
T ss_dssp CCEEEEEEGG-----GTEEEEEETTTCCEEEEEECCCCEE--EEEECSSSCEEEEEESTT-----CEEEEEECSSSSCEE
T ss_pred CCEEEEEecC-----CCeEEEEeCcccceeeeEEccCCcc--eEEEcCCCCEEEEEeCCC-----CeEEEEECCCCceeE
Confidence 4677887763 3579999999998865544432222 3333 345 477765422 4799999988874 2
Q ss_pred -EcccCCccccceeEEEE-C-CEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CC-EEEEEcCCC
Q psy14726 473 -LIAPMNVERSDASATTL-Q-GKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HE-CIYVIGGFN 547 (712)
Q Consensus 473 -~~~~~p~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~ 547 (712)
.+.....+ .++++.- + ..+| .+...+ ....+.+||..+++....-+. ....+.++.. ++ .+|+.+..+
T Consensus 77 ~~~~~~~~~--~~~~~~s~dg~~l~-~~~~~~--~~~~i~v~d~~~~~~~~~~~~--~~~~~~~~~spdg~~l~~~~~~~ 149 (331)
T 3u4y_A 77 VAIQEGQSS--MADVDITPDDQFAV-TVTGLN--HPFNMQSYSFLKNKFISTIPI--PYDAVGIAISPNGNGLILIDRSS 149 (331)
T ss_dssp EEEEECSSC--CCCEEECTTSSEEE-ECCCSS--SSCEEEEEETTTTEEEEEEEC--CTTEEEEEECTTSSCEEEEEETT
T ss_pred EecccCCCC--ccceEECCCCCEEE-EecCCC--CcccEEEEECCCCCeEEEEEC--CCCccceEECCCCCEEEEEecCC
Confidence 22221111 1212222 3 4566 433221 123799999998876443222 2222334433 44 588776532
Q ss_pred CCCccce-EEEEeCCCCc-EEEc--CCCCCCccceEEEEE-CC-EEEEEcccCCCceeeeEEEEECCCCeE
Q psy14726 548 GMSRMCN-GEKYNPVTKT-WSQV--PDMYNPRSNFAIEVI-DD-MIFAIGGFNGVTTIYHVECYDEKTDEW 612 (712)
Q Consensus 548 ~~~~~~~-v~~yd~~~~~-W~~~--~~~p~~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~v~~yd~~~~~W 612 (712)
.. +..|+...+. .... ...+......+++.. ++ .+|+.+..+ ..+.+||+.+++.
T Consensus 150 -----~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~-----~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 150 -----ANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIG-----NSIGILETQNPEN 210 (331)
T ss_dssp -----TTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTT-----TEEEEEECSSTTS
T ss_pred -----CceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCC-----CeEEEEECCCCcc
Confidence 34 6666654321 1111 001111222233333 44 477765433 3689999987765
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=95.74 E-value=0.34 Score=49.20 Aligned_cols=187 Identities=11% Similarity=0.046 Sum_probs=93.9
Q ss_pred eEEEEECCCCcEEEeCCCCCCcceeEEE-EECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--
Q psy14726 413 SCRCFNAVTKVWKEIAPMNFKRCYVSTA-VHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL-- 489 (712)
Q Consensus 413 ~v~~yd~~~~~W~~~~~~~~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-- 489 (712)
.+|.+|..++++..+........-..++ .-+|++|+.+... ....++.||+.+.+++.+............+.+
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~---~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~sp 95 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKED---DEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDE 95 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEET---TEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEET
T ss_pred EEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecC---CCceEEEEEecCCcEEEeeeeecCCCCCEEEEECC
Confidence 4778888888887653222111112233 3467888775421 125799999988888776553322222222222
Q ss_pred CC-EEEEEcccCCCCccCceEEeeCC-CCeeEEeCCC------CCCC----cceEEEE-ECCEEEEEcCCCCCCccceEE
Q psy14726 490 QG-KIYITGGFNGHNCLNSCEVYDPE-CNQWTLIEPM------RHRR----SGVSCIA-YHECIYVIGGFNGMSRMCNGE 556 (712)
Q Consensus 490 ~~-~iyv~GG~~~~~~~~~v~~yd~~-~~~W~~~~~~------p~~r----~~~~~~~-~~~~iyv~GG~~~~~~~~~v~ 556 (712)
++ .+|+.+..+ ..+..||.. ++..+.+... |.+| .-+.++. -++++|+.+.. ...+.
T Consensus 96 dg~~l~~~~~~~-----~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~-----~~~v~ 165 (347)
T 3hfq_A 96 ARQLVYSANYHK-----GTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLG-----SDKVY 165 (347)
T ss_dssp TTTEEEEEETTT-----TEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETT-----TTEEE
T ss_pred CCCEEEEEeCCC-----CEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCC-----CCEEE
Confidence 44 477665322 357777764 3344333211 1111 1122222 25677776543 24788
Q ss_pred EEeCC-CCcEEEcCC--CCCCccceEEEEE-CCE-EEEEcccCCCceeeeEEEEECCCCeEEEc
Q psy14726 557 KYNPV-TKTWSQVPD--MYNPRSNFAIEVI-DDM-IFAIGGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 557 ~yd~~-~~~W~~~~~--~p~~r~~~~~~~~-~~~-i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
.||.. +.+...+.. .+....-..++.. +++ +|+.+..++ .-.++.++..++++..+
T Consensus 166 ~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~---~v~v~~~~~~~g~~~~~ 226 (347)
T 3hfq_A 166 VYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSS---QIASLKYDTQTGAFTQL 226 (347)
T ss_dssp EEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTT---EEEEEEEETTTTEEEEE
T ss_pred EEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCC---EEEEEEecCCCCceEEe
Confidence 88887 565554422 1111111122322 454 777654332 11344555556776544
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=95.72 E-value=1 Score=51.06 Aligned_cols=244 Identities=11% Similarity=-0.049 Sum_probs=125.4
Q ss_pred CCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCC--------CccceEEEEECCCCcE--EEeC
Q psy14726 360 SPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGN--------EYYNSCRCFNAVTKVW--KEIA 428 (712)
Q Consensus 360 ~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~--------~~~~~v~~yd~~~~~W--~~~~ 428 (712)
.....+..+|..+++... ....+.... .+.+.. +++.++++..+.. .....+++++..+..- ..+.
T Consensus 144 ~~~~~i~v~dl~tg~~~~--~~~~~~~~~-~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~ 220 (695)
T 2bkl_A 144 ADEAVLHVIDVDSGEWSK--VDVIEGGKY-ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVH 220 (695)
T ss_dssp CSCCEEEEEETTTCCBCS--SCCBSCCTT-CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEE
T ss_pred CceEEEEEEECCCCCCcC--CcccCcccc-cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEE
Confidence 334578889988887541 111111111 233333 6666666655432 2345699999987763 2222
Q ss_pred CCCC-CcceeEEE-EECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEECCEEEEEcccCCCCccC
Q psy14726 429 PMNF-KRCYVSTA-VHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLN 506 (712)
Q Consensus 429 ~~~~-~r~~~~~~-~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~ 506 (712)
..+. +....+.. .-+|+..+++..... ..+.++.+|..+..|..+..-.... ...+.-+|.+|+....+ ....
T Consensus 221 ~~~~~~~~~~~~~~SpDG~~l~~~~~~~~-~~~~l~~~~~~~~~~~~l~~~~~~~--~~~~~~~g~l~~~s~~~--~~~~ 295 (695)
T 2bkl_A 221 ERTGDPTTFLQSDLSRDGKYLFVYILRGW-SENDVYWKRPGEKDFRLLVKGVGAK--YEVHAWKDRFYVLTDEG--APRQ 295 (695)
T ss_dssp CCCCCTTCEEEEEECTTSCCEEEEEEETT-TEEEEEEECTTCSSCEEEEECSSCC--EEEEEETTEEEEEECTT--CTTC
T ss_pred ecCCCCEEEEEEEECCCCCEEEEEEeCCC-CceEEEEEcCCCCceEEeecCCCce--EEEEecCCcEEEEECCC--CCCC
Confidence 2222 22223333 335554444433221 3467888888777888775432221 22223466666654432 2246
Q ss_pred ceEEeeCCCCe---eEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEE-
Q psy14726 507 SCEVYDPECNQ---WTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEV- 582 (712)
Q Consensus 507 ~v~~yd~~~~~---W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~- 582 (712)
.++.+|..+.. |+.+-+-.....-..+...++++++.+..++ ...++.+|+....-..+. .+......+...
T Consensus 296 ~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg---~~~l~~~~~~g~~~~~l~-~~~~~~v~~~~~s 371 (695)
T 2bkl_A 296 RVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDA---TSEVRVATLKGKPVRTVQ-LPGVGAASNLMGL 371 (695)
T ss_dssp EEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETT---EEEEEEEETTCCEEEECC-CSSSSEECCCBSC
T ss_pred EEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECC---EEEEEEEeCCCCeeEEec-CCCCeEEEEeecC
Confidence 78999987765 8877542212222333445888888775433 356888887655444442 221111011111
Q ss_pred ECCEEEEEcccCCCceeeeEEEEECCCCeEEEcc
Q psy14726 583 IDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEAT 616 (712)
Q Consensus 583 ~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 616 (712)
-++..+++...+. ..-..++.||..+++.+.+.
T Consensus 372 ~d~~~l~~~~ss~-~~P~~v~~~d~~~g~~~~l~ 404 (695)
T 2bkl_A 372 EDLDDAYYVFTSF-TTPRQIYKTSVSTGKSELWA 404 (695)
T ss_dssp TTCSEEEEEEEET-TEEEEEEEEETTTCCEEEEE
T ss_pred CCCCEEEEEEcCC-CCCCEEEEEECCCCcEEEEe
Confidence 1333333322222 12347899999988876663
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=95.69 E-value=1.2 Score=46.27 Aligned_cols=187 Identities=14% Similarity=0.162 Sum_probs=94.8
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 474 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 474 (712)
++..++.|+.+ ..+..||..+.+-...-.-.. ..-.+++. -++..++.|+.+ ..+..||..+.+....
T Consensus 134 dg~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~h~-~~v~~~~~~p~~~~l~s~s~d-----~~v~iwd~~~~~~~~~ 202 (393)
T 1erj_A 134 DGKFLATGAED-----RLIRIWDIENRKIVMILQGHE-QDIYSLDYFPSGDKLVSGSGD-----RTVRIWDLRTGQCSLT 202 (393)
T ss_dssp TSSEEEEEETT-----SCEEEEETTTTEEEEEECCCS-SCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEE
T ss_pred CCCEEEEEcCC-----CeEEEEECCCCcEEEEEccCC-CCEEEEEEcCCCCEEEEecCC-----CcEEEEECCCCeeEEE
Confidence 66777788754 358899998876543211111 11123333 255666666643 4688899888765433
Q ss_pred ccCCccccceeEEEE---CCEEEEEcccCCCCccCceEEeeCCCCeeEEe-CCC----CCCCcceEEEEE--CCEEEEEc
Q psy14726 475 APMNVERSDASATTL---QGKIYITGGFNGHNCLNSCEVYDPECNQWTLI-EPM----RHRRSGVSCIAY--HECIYVIG 544 (712)
Q Consensus 475 ~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~----p~~r~~~~~~~~--~~~iyv~G 544 (712)
-... .....+.+ ++++++.|+.++ .+..||..+..-... ... .........+.+ ++..++.|
T Consensus 203 ~~~~---~~v~~~~~~~~~~~~l~~~s~d~-----~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~ 274 (393)
T 1erj_A 203 LSIE---DGVTTVAVSPGDGKYIAAGSLDR-----AVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSG 274 (393)
T ss_dssp EECS---SCEEEEEECSTTCCEEEEEETTS-----CEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEE
T ss_pred EEcC---CCcEEEEEECCCCCEEEEEcCCC-----cEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEE
Confidence 2211 11222222 677888887664 588889887653322 110 001111222222 56677777
Q ss_pred CCCCCCccceEEEEeCCCCcEEEcCCCCC-C---------cc-ceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 545 GFNGMSRMCNGEKYNPVTKTWSQVPDMYN-P---------RS-NFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 545 G~~~~~~~~~v~~yd~~~~~W~~~~~~p~-~---------r~-~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
+.+ ..+..||..+..-......+. . .. -.+++.. ++..++.||.++ .+.+||..+++
T Consensus 275 s~d-----~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~-----~v~iwd~~~~~ 343 (393)
T 1erj_A 275 SLD-----RSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDR-----GVLFWDKKSGN 343 (393)
T ss_dssp ETT-----SEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTS-----EEEEEETTTCC
T ss_pred eCC-----CEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCC-----eEEEEECCCCe
Confidence 754 467788876532111100000 0 00 1112222 566777777665 57889988765
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=95.68 E-value=0.46 Score=47.40 Aligned_cols=185 Identities=11% Similarity=0.151 Sum_probs=94.8
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA 475 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 475 (712)
++..++.|+.+ ..+..+|..++.-...-..............+++.++.|+.+ ..+..||..+.+-..
T Consensus 24 ~~~~l~s~~~d-----g~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d-----~~i~vwd~~~~~~~~-- 91 (304)
T 2ynn_A 24 TEPWVLTTLYS-----GRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD-----FRIRVFNYNTGEKVV-- 91 (304)
T ss_dssp SSSEEEEEETT-----SEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT-----SEEEEEETTTCCEEE--
T ss_pred CCCEEEEEcCC-----CcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCC-----CEEEEEECCCCcEEE--
Confidence 45666677754 358888988876432211111112222233456777777753 468889988765321
Q ss_pred cCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE---CCEEEEEcCCCCCC
Q psy14726 476 PMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY---HECIYVIGGFNGMS 550 (712)
Q Consensus 476 ~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~ 550 (712)
.+..-.....++.+ ++.+++.|+.++ .+..||..++ |.....+........++.+ ++.+++.|+.+
T Consensus 92 ~~~~h~~~v~~~~~~~~~~~l~sgs~D~-----~v~lWd~~~~-~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D--- 162 (304)
T 2ynn_A 92 DFEAHPDYIRSIAVHPTKPYVLSGSDDL-----TVKLWNWENN-WALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD--- 162 (304)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEEETTS-----CEEEEEGGGT-TEEEEEECCCCSCEEEEEECTTCTTEEEEEETT---
T ss_pred EEeCCCCcEEEEEEcCCCCEEEEECCCC-----eEEEEECCCC-cchhhhhcccCCcEEEEEECCCCCCEEEEEeCC---
Confidence 11111111122223 566777777664 5777887654 2221111111112222333 35677778765
Q ss_pred ccceEEEEeCCCCc--EEEcCCCCCCccceEEEEE----CCEEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 551 RMCNGEKYNPVTKT--WSQVPDMYNPRSNFAIEVI----DDMIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 551 ~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~----~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
..+..||..+.. ...... ..+ ....+.+ ++.+++.|+.++ .+.+||..+.+
T Consensus 163 --~~v~iwd~~~~~~~~~~~~~--~~~-~v~~~~~~~~~~~~~l~s~s~D~-----~i~iWd~~~~~ 219 (304)
T 2ynn_A 163 --RTVKVWSLGQSTPNFTLTTG--QER-GVNYVDYYPLPDKPYMITASDDL-----TIKIWDYQTKS 219 (304)
T ss_dssp --SEEEEEETTCSSCSEEEECC--CTT-CEEEEEECCSTTCCEEEEEETTS-----EEEEEETTTTE
T ss_pred --CeEEEEECCCCCccceeccC--CcC-cEEEEEEEEcCCCCEEEEEcCCC-----eEEEEeCCCCc
Confidence 467888876432 111111 111 1122222 456777787665 67888988765
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=95.68 E-value=0.52 Score=46.90 Aligned_cols=215 Identities=10% Similarity=0.009 Sum_probs=112.2
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEE
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 426 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 426 (712)
+.++++.. ....+..||+.++........ ..-.+++.. ++.+|+.. ...+++||+.++++..
T Consensus 25 ~~l~~~d~-----~~~~i~~~d~~~~~~~~~~~~-----~~~~~i~~~~dG~l~v~~-------~~~l~~~d~~~g~~~~ 87 (297)
T 3g4e_A 25 NSLLFVDI-----PAKKVCRWDSFTKQVQRVTMD-----APVSSVALRQSGGYVATI-------GTKFCALNWKEQSAVV 87 (297)
T ss_dssp TEEEEEET-----TTTEEEEEETTTCCEEEEECS-----SCEEEEEEBTTSSEEEEE-------TTEEEEEETTTTEEEE
T ss_pred CEEEEEEC-----CCCEEEEEECCCCcEEEEeCC-----CceEEEEECCCCCEEEEE-------CCeEEEEECCCCcEEE
Confidence 45555543 234688999988766543211 112233333 56666543 2469999999999887
Q ss_pred eCCCCC----CcceeEEEEECCeEEEEcccCC------CCCCceeEEeecCCCceEEc-ccCCccccceeEEEE-CC-EE
Q psy14726 427 IAPMNF----KRCYVSTAVHHDVIYAMGGYNG------QRRQNSVEKYNYTENQWSLI-APMNVERSDASATTL-QG-KI 493 (712)
Q Consensus 427 ~~~~~~----~r~~~~~~~~~~~iyv~GG~~~------~~~~~~v~~yd~~~~~W~~~-~~~p~~r~~~~~~~~-~~-~i 493 (712)
+...+. .+.....+.-+|++|+..-... ......++++|+.. +...+ ..+..+ .+.+.. ++ .+
T Consensus 88 ~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~~~~~p---ngi~~spdg~~l 163 (297)
T 3g4e_A 88 LATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFDQVDIS---NGLDWSLDHKIF 163 (297)
T ss_dssp EEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEEEESBE---EEEEECTTSCEE
T ss_pred EEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEeeccccc---cceEEcCCCCEE
Confidence 654322 2222233334678887431111 12345789998863 33332 111111 122222 34 68
Q ss_pred EEEcccCCCCccCceEEeeC--CCCeeEE---eCCCCCC-CcceEEEEE-CCEEEEEcCCCCCCccceEEEEeCCCCcEE
Q psy14726 494 YITGGFNGHNCLNSCEVYDP--ECNQWTL---IEPMRHR-RSGVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKTWS 566 (712)
Q Consensus 494 yv~GG~~~~~~~~~v~~yd~--~~~~W~~---~~~~p~~-r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 566 (712)
|+.... .+.+++||. .++.... +..++.. ..-.+++.- +|.||+.... ...|.+||+++.+..
T Consensus 164 yv~~~~-----~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~-----~~~v~~~d~~tG~~~ 233 (297)
T 3g4e_A 164 YYIDSL-----SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYN-----GGRVIRLDPVTGKRL 233 (297)
T ss_dssp EEEEGG-----GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEET-----TTEEEEECTTTCCEE
T ss_pred EEecCC-----CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcC-----CCEEEEEcCCCceEE
Confidence 887643 246788865 5555432 1122211 111233332 5789987532 146999999977655
Q ss_pred EcCCCCCCccceEEEEEC----CEEEEEcccCC
Q psy14726 567 QVPDMYNPRSNFAIEVID----DMIFAIGGFNG 595 (712)
Q Consensus 567 ~~~~~p~~r~~~~~~~~~----~~i~v~GG~~~ 595 (712)
..-.+|.. ....+.++ +.|||.....+
T Consensus 234 ~~i~~p~~--~~t~~~f~g~d~~~L~vt~~~~~ 264 (297)
T 3g4e_A 234 QTVKLPVD--KTTSCCFGGKNYSEMYVTCARDG 264 (297)
T ss_dssp EEEECSSS--BEEEEEEESGGGCEEEEEEBCTT
T ss_pred EEEECCCC--CceEEEEeCCCCCEEEEEcCCcC
Confidence 44344432 23344443 47888765543
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=95.67 E-value=0.19 Score=51.06 Aligned_cols=189 Identities=13% Similarity=0.165 Sum_probs=97.2
Q ss_pred CCEEEEEeecCCCCccceEEEEECCC--CcEEEeCCCCCCcceeEEEE--ECCeEEEEcccCCCCCCceeEEeecCCCce
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVT--KVWKEIAPMNFKRCYVSTAV--HHDVIYAMGGYNGQRRQNSVEKYNYTENQW 471 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~--~~W~~~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 471 (712)
++..++.|+.+ ..+..+|... ..+..+..+.........+. .++.+++.||.+ ..+..||..+..|
T Consensus 118 ~g~~las~s~D-----~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D-----~~i~iW~~~~~~~ 187 (330)
T 2hes_X 118 DGYYLATCSRD-----KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYD-----DTVRIWKDYDDDW 187 (330)
T ss_dssp TSCEEEEEETT-----SCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETT-----SCEEEEEEETTEE
T ss_pred CCCEEEEEeCC-----CEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCC-----CeEEEEECCCCCe
Confidence 56777777754 3578888743 23443333322222222222 256777877754 4578888887777
Q ss_pred EEcccCCccccceeEEEE--C--CEEEEEcccCCCCccCceEEeeCCC------CeeEEeCCCCC--CCcceEEEEECCE
Q psy14726 472 SLIAPMNVERSDASATTL--Q--GKIYITGGFNGHNCLNSCEVYDPEC------NQWTLIEPMRH--RRSGVSCIAYHEC 539 (712)
Q Consensus 472 ~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~v~~yd~~~------~~W~~~~~~p~--~r~~~~~~~~~~~ 539 (712)
..+..+..-...-..+.+ + +..++.||.++ .+..||..+ ..|.....++. ...-.+++...+.
T Consensus 188 ~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~-----~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~ 262 (330)
T 2hes_X 188 ECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDS-----TVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG 262 (330)
T ss_dssp EEEEEECCCSSCEEEEEECCSSSSCEEEEEETTS-----CEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS
T ss_pred eEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCC-----eEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC
Confidence 665544322111222223 2 45666776654 355555432 34665554432 2222233333445
Q ss_pred EEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCC-cc-ceEEEEE----CCEEEEEcccCCCceeeeEEEEECCC
Q psy14726 540 IYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNP-RS-NFAIEVI----DDMIFAIGGFNGVTTIYHVECYDEKT 609 (712)
Q Consensus 540 iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~-r~-~~~~~~~----~~~i~v~GG~~~~~~~~~v~~yd~~~ 609 (712)
+++.||.+ ..+..||..+..|..+...... .. ....+.+ ++.+++.||.++ .+.+||.++
T Consensus 263 ~l~s~~~d-----g~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg-----~v~~W~~~~ 328 (330)
T 2hes_X 263 LIASVGAD-----GVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDG-----IVNFWSLEK 328 (330)
T ss_dssp CEEEEETT-----SCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTS-----EEEEEEC--
T ss_pred EEEEEeCC-----CEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCC-----cEEEEEecc
Confidence 66667654 4677888888888655322111 11 1222222 467888888776 567777653
|
| >2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} | Back alignment and structure |
|---|
Probab=95.66 E-value=1.1 Score=45.26 Aligned_cols=210 Identities=14% Similarity=0.142 Sum_probs=108.3
Q ss_pred EEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEE-
Q psy14726 365 VETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH- 442 (712)
Q Consensus 365 v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~- 442 (712)
++.-.-.-..|..+.... +.+-....++.. ++.+|+.|.. ..+++-+-.-.+|+.+..... ..-++++..
T Consensus 101 i~~S~DgG~tW~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~------g~v~~S~DgG~tW~~~~~~~~-~~~~~~~~~~ 172 (327)
T 2xbg_A 101 MLHTTDGGQSWSQIPLDP-KLPGSPRLIKALGNGSAEMITNV------GAIYRTKDSGKNWQALVQEAI-GVMRNLNRSP 172 (327)
T ss_dssp EEEESSTTSSCEECCCCT-TCSSCEEEEEEEETTEEEEEETT------CCEEEESSTTSSEEEEECSCC-CCEEEEEECT
T ss_pred EEEECCCCCCceECcccc-CCCCCeEEEEEECCCCEEEEeCC------ccEEEEcCCCCCCEEeecCCC-cceEEEEEcC
Confidence 433333456899864321 112223344443 6788887642 135554444668998764322 233444443
Q ss_pred CCeEEEEcccCCCCCCceeEEee-cCCCceEEcccCCccccceeEEEE-CCEEEEEcccCCCCccCceEEeeCC-CCeeE
Q psy14726 443 HDVIYAMGGYNGQRRQNSVEKYN-YTENQWSLIAPMNVERSDASATTL-QGKIYITGGFNGHNCLNSCEVYDPE-CNQWT 519 (712)
Q Consensus 443 ~~~iyv~GG~~~~~~~~~v~~yd-~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~-~~~W~ 519 (712)
++.+|++|.. ..+++-+ ....+|+.+.. +.....+.++.. ++.+|+.+.. + .+...+.. -.+|+
T Consensus 173 ~~~~~~~g~~------G~~~~S~d~gG~tW~~~~~-~~~~~~~~~~~~~~g~~~~~~~~-G-----~~~~s~~D~G~tW~ 239 (327)
T 2xbg_A 173 SGEYVAVSSR------GSFYSTWEPGQTAWEPHNR-TTSRRLHNMGFTPDGRLWMIVNG-G-----KIAFSDPDNSENWG 239 (327)
T ss_dssp TSCEEEEETT------SSEEEEECTTCSSCEEEEC-CSSSCEEEEEECTTSCEEEEETT-T-----EEEEEETTEEEEEC
T ss_pred CCcEEEEECC------CcEEEEeCCCCCceeECCC-CCCCccceeEECCCCCEEEEeCC-c-----eEEEecCCCCCeeE
Confidence 5677766531 2344443 33678998843 333333444332 6788877642 1 24444322 45798
Q ss_pred EeCC--CCCCCcceEEEEE-CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCC-CCCccceEEEEE-CCEEEEEcccC
Q psy14726 520 LIEP--MRHRRSGVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDM-YNPRSNFAIEVI-DDMIFAIGGFN 594 (712)
Q Consensus 520 ~~~~--~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-p~~r~~~~~~~~-~~~i~v~GG~~ 594 (712)
.+.. ++.....++++.. ++.+|++|+. ..+++-.-.-.+|+.+... +.+...+.++.. ++.++++| .+
T Consensus 240 ~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~------g~i~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G-~~ 312 (327)
T 2xbg_A 240 ELLSPLRRNSVGFLDLAYRTPNEVWLAGGA------GALLCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILG-QK 312 (327)
T ss_dssp CCBCTTSSCCSCEEEEEESSSSCEEEEEST------TCEEEESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEEC-ST
T ss_pred eccCCcccCCcceEEEEecCCCEEEEEeCC------CeEEEeCCCCcccEEcCccCCCCCCeEEEEEECCCceEEEc-CC
Confidence 7753 2332223333333 5789998862 2344433345789988632 223333445444 56666655 34
Q ss_pred CCceeeeEEEEEC
Q psy14726 595 GVTTIYHVECYDE 607 (712)
Q Consensus 595 ~~~~~~~v~~yd~ 607 (712)
+ .++.++.
T Consensus 313 G-----~i~~~~~ 320 (327)
T 2xbg_A 313 G-----ILLRYVT 320 (327)
T ss_dssp T-----EEEEECC
T ss_pred c-----eEEEEcC
Confidence 3 4666664
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=95.65 E-value=0.4 Score=55.24 Aligned_cols=187 Identities=10% Similarity=0.100 Sum_probs=98.6
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA 475 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 475 (712)
++..+++|+.+ ..+..||..+++....-.............-++..+++||.+ ..+.+||..+.+....-
T Consensus 24 ~~~~la~~~~~-----g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~vw~~~~~~~~~~~ 93 (814)
T 3mkq_A 24 TEPWVLTTLYS-----GRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD-----FRIRVFNYNTGEKVVDF 93 (814)
T ss_dssp SSSEEEEEETT-----SEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT-----SEEEEEETTTCCEEEEE
T ss_pred CCCEEEEEeCC-----CEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCcEEEEE
Confidence 45556666643 468899988876543222222222222233466777777753 46899998887754321
Q ss_pred cCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCC-CCCcceEEEEE--CCEEEEEcCCCCCC
Q psy14726 476 PMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMR-HRRSGVSCIAY--HECIYVIGGFNGMS 550 (712)
Q Consensus 476 ~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p-~~r~~~~~~~~--~~~iyv~GG~~~~~ 550 (712)
.. .........+ ++..++.|+.+ ..+..||..++ |.....+. ....-.+++.. ++..++.|+.+
T Consensus 94 ~~--~~~~v~~~~~s~~~~~l~~~~~d-----g~i~vw~~~~~-~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d--- 162 (814)
T 3mkq_A 94 EA--HPDYIRSIAVHPTKPYVLSGSDD-----LTVKLWNWENN-WALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD--- 162 (814)
T ss_dssp EC--CSSCEEEEEECSSSSEEEEEETT-----SEEEEEEGGGT-SEEEEEEECCSSCEEEEEEETTEEEEEEEEETT---
T ss_pred ec--CCCCEEEEEEeCCCCEEEEEcCC-----CEEEEEECCCC-ceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCC---
Confidence 11 1111222222 56666677654 35788888765 22222111 11112223333 45677777754
Q ss_pred ccceEEEEeCCCCc--EEEcCCCCCCccceEEEEE---CCEEEEEcccCCCceeeeEEEEECCCCeE
Q psy14726 551 RMCNGEKYNPVTKT--WSQVPDMYNPRSNFAIEVI---DDMIFAIGGFNGVTTIYHVECYDEKTDEW 612 (712)
Q Consensus 551 ~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 612 (712)
..+..||..+.. +...... ......++.. ++..+++|+.++ .+.+||..+++-
T Consensus 163 --g~v~vwd~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~l~~~~~dg-----~i~~~d~~~~~~ 220 (814)
T 3mkq_A 163 --RTVKVWSLGQSTPNFTLTTGQ--ERGVNYVDYYPLPDKPYMITASDDL-----TIKIWDYQTKSC 220 (814)
T ss_dssp --SEEEEEETTCSSCSEEEECCC--TTCCCEEEECCSTTCCEEEEECTTS-----EEEEEETTTTEE
T ss_pred --CeEEEEECCCCcceeEEecCC--CCCEEEEEEEECCCCCEEEEEeCCC-----EEEEEECCCCcE
Confidence 468889886543 2222211 1111222222 677888887665 578888877653
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=95.65 E-value=0.071 Score=56.68 Aligned_cols=187 Identities=8% Similarity=0.038 Sum_probs=97.3
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCC-CcceeEEEEE--CCeEEEEcccCCCCCCceeEEeecCCCceE
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNF-KRCYVSTAVH--HDVIYAMGGYNGQRRQNSVEKYNYTENQWS 472 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~-~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 472 (712)
++.+++.|+.++ .|..||..++.-..+..+.. ...-.+++.. ++.+++.||.+ ..+.+||..++...
T Consensus 131 ~~~~lasGs~dg-----~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D-----~~v~iwd~~~~~~~ 200 (435)
T 4e54_B 131 HPSTVAVGSKGG-----DIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSME-----GTTRLQDFKGNILR 200 (435)
T ss_dssp CTTCEEEEETTS-----CEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSS-----SCEEEEETTSCEEE
T ss_pred CCCEEEEEeCCC-----EEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCC-----CEEEEeeccCCcee
Confidence 345777887654 48888887765433322221 1122233432 56677777754 35888998887765
Q ss_pred EcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE---CCEEEEEcCCC
Q psy14726 473 LIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY---HECIYVIGGFN 547 (712)
Q Consensus 473 ~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~ 547 (712)
.+...........+..+ ++++++.|+.++ .+..||..... +..+.........+.+ ++.+++.|+.+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg-----~i~~wd~~~~~---~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d 272 (435)
T 4e54_B 201 VFASSDTINIWFCSLDVSASSRMVVTGDNVG-----NVILLNMDGKE---LWNLRMHKKKVTHVALNPCCDWFLATASVD 272 (435)
T ss_dssp EEECCSSCSCCCCCEEEETTTTEEEEECSSS-----BEEEEESSSCB---CCCSBCCSSCEEEEEECTTCSSEEEEEETT
T ss_pred EEeccCCCCccEEEEEECCCCCEEEEEeCCC-----cEeeeccCcce---eEEEecccceEEeeeecCCCceEEEEecCc
Confidence 55333222222222222 677888887664 57788876543 2222211222233333 23467777654
Q ss_pred CCCccceEEEEeCCCCcEEEcC-CCCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCC
Q psy14726 548 GMSRMCNGEKYNPVTKTWSQVP-DMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTD 610 (712)
Q Consensus 548 ~~~~~~~v~~yd~~~~~W~~~~-~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~ 610 (712)
..+..||..+.+-.... ...........+.+ ++..++.||.++ .+.+||..+.
T Consensus 273 -----~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~-----~i~iwd~~~~ 328 (435)
T 4e54_B 273 -----QTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKS-----EIRVYSASQW 328 (435)
T ss_dssp -----SBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSS-----CEEEEESSSS
T ss_pred -----ceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCC-----EEEEEECCCC
Confidence 34667887654321110 00000111112222 677778888765 5778887654
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=95.64 E-value=2.1 Score=43.02 Aligned_cols=190 Identities=12% Similarity=0.069 Sum_probs=105.5
Q ss_pred ceEEEEECCCCcEEEeCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCC--ceEEccc-C-----Ccccc
Q psy14726 412 NSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTEN--QWSLIAP-M-----NVERS 482 (712)
Q Consensus 412 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~-~-----p~~r~ 482 (712)
..++.+|+.+++.........-..-+++++ -+|++|+.... ...+.+||+... .-..+.. . .....
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~-----~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~ 143 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVA-----LHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFC 143 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETT-----TTEEEEECTTCSSCCSEEESBTTBCCCSTTCCS
T ss_pred CcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECC-----CCEEEEEeCCCCeEEEEEecccCCCCCCccccC
Confidence 468999998887654322111122334444 36789987642 257999998765 2222221 1 11111
Q ss_pred ceeEEEE---CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCC-------CCCCc-ceEEEEE-C-CEEEEEcCCCCC
Q psy14726 483 DASATTL---QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPM-------RHRRS-GVSCIAY-H-ECIYVIGGFNGM 549 (712)
Q Consensus 483 ~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-------p~~r~-~~~~~~~-~-~~iyv~GG~~~~ 549 (712)
....+.+ ++.|||..++. ...+.+||+....-..+... +.... -.+++.. + +.||+....
T Consensus 144 ~P~~ia~~~~~g~lyv~d~~~----~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~--- 216 (329)
T 3fvz_A 144 QPTDVAVEPSTGAVFVSDGYC----NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE--- 216 (329)
T ss_dssp SEEEEEECTTTCCEEEEECSS----CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT---
T ss_pred CCcEEEEeCCCCeEEEEeCCC----CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC---
Confidence 2333333 58899998632 25689999765544444311 11111 2333433 4 899998754
Q ss_pred CccceEEEEeCCCCcEEEcC-CCCCCccceEEEEECCEEEEEcccCC--CceeeeEEEEECCCCeEEEc
Q psy14726 550 SRMCNGEKYNPVTKTWSQVP-DMYNPRSNFAIEVIDDMIFAIGGFNG--VTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 550 ~~~~~v~~yd~~~~~W~~~~-~~p~~r~~~~~~~~~~~i~v~GG~~~--~~~~~~v~~yd~~~~~W~~~ 615 (712)
...|.+||+.+.+....- .........+++...+.+|...|... ......+.+||+.+++....
T Consensus 217 --~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~ 283 (329)
T 3fvz_A 217 --NGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDV 283 (329)
T ss_dssp --TTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEE
T ss_pred --CCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEE
Confidence 367999999876655432 21222223344445677777776432 11234689999888876544
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=95.63 E-value=0.33 Score=48.23 Aligned_cols=191 Identities=13% Similarity=0.104 Sum_probs=94.6
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcce-eEEEEE---CCeEEEEcccCCCCCCceeEEeecCCCce
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCY-VSTAVH---HDVIYAMGGYNGQRRQNSVEKYNYTENQW 471 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~-~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 471 (712)
+++.++.||.+ ..+..||..+.+...+..+...... .+++.. ++.+++.|+.+ .++.+||..+.+|
T Consensus 20 ~g~~las~s~D-----~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D-----~~v~iWd~~~~~~ 89 (297)
T 2pm7_B 20 YGKRMATCSSD-----KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-----GKVMIWKEENGRW 89 (297)
T ss_dssp TSSEEEEEETT-----SCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT-----TEEEEEEBSSSCB
T ss_pred CCCEEEEEeCC-----CEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCC-----CEEEEEEcCCCce
Confidence 56677777754 3477888765433222222211111 223322 26777777754 4688999988877
Q ss_pred EEcccCCccccceeEEEE--C--CEEEEEcccCCCCccCceEEeeCCCCe-eE--EeCCCCCCCcceEEEEE--------
Q psy14726 472 SLIAPMNVERSDASATTL--Q--GKIYITGGFNGHNCLNSCEVYDPECNQ-WT--LIEPMRHRRSGVSCIAY-------- 536 (712)
Q Consensus 472 ~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~--~~~~~p~~r~~~~~~~~-------- 536 (712)
..+..+........++.+ + +.+++.|+.++ .+..||..+.. +. .+.... ..-.++...
T Consensus 90 ~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~-----~v~~wd~~~~~~~~~~~~~~h~--~~v~~~~~~p~~~~~~~ 162 (297)
T 2pm7_B 90 SQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDG-----KVSVVEFKENGTTSPIIIDAHA--IGVNSASWAPATIEEDG 162 (297)
T ss_dssp CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTS-----EEEEEEBCSSSCBCCEEEECCS--SCEEEEEECCCC-----
T ss_pred EEEEEeecCCCceeEEEeCcCCCCcEEEEEECCC-----cEEEEEecCCCceeeeeeeccc--CccceEeecCCcccccc
Confidence 655433221222223333 2 56777777653 46677765542 21 110000 000111111
Q ss_pred ------CCEEEEEcCCCCCCccceEEEEeCCCC--cEEEcCCCCCCccceEEEEE--C---CEEEEEcccCCCceeeeEE
Q psy14726 537 ------HECIYVIGGFNGMSRMCNGEKYNPVTK--TWSQVPDMYNPRSNFAIEVI--D---DMIFAIGGFNGVTTIYHVE 603 (712)
Q Consensus 537 ------~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~---~~i~v~GG~~~~~~~~~v~ 603 (712)
++++++.||.+ ..+..||..+. .|.....+.........+.+ + +.+++.|+.++ .+.
T Consensus 163 ~~~~~~~~~~l~sgs~D-----~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~-----~v~ 232 (297)
T 2pm7_B 163 EHNGTKESRKFVTGGAD-----NLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDR-----TCI 232 (297)
T ss_dssp -------CCEEEEEETT-----SCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTS-----CEE
T ss_pred cCCCCCCcceEEEEcCC-----CcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCC-----cEE
Confidence 23567777764 34666666543 35544333322222233333 2 47888888765 456
Q ss_pred EEECCC--CeEE
Q psy14726 604 CYDEKT--DEWY 613 (712)
Q Consensus 604 ~yd~~~--~~W~ 613 (712)
+||+.+ ..|.
T Consensus 233 iWd~~~~~~~~~ 244 (297)
T 2pm7_B 233 IWTQDNEQGPWK 244 (297)
T ss_dssp EEEESSTTSCCE
T ss_pred EEEeCCCCCccc
Confidence 666654 3454
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=95.54 E-value=0.73 Score=50.45 Aligned_cols=238 Identities=9% Similarity=-0.005 Sum_probs=118.5
Q ss_pred CceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-C-CEEEEEeecCCCCccceEEEEEC--CCC
Q psy14726 347 HEILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-G-YNIYVIGGFDGNEYYNSCRCFNA--VTK 422 (712)
Q Consensus 347 ~~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~-~~lyv~GG~~~~~~~~~v~~yd~--~~~ 422 (712)
.+.+++.+.. ...+..+|..+++-... .+. ...-|++++. + ..+|+.+. + +.+..||+ .+.
T Consensus 148 ~~~~~vs~~~-----d~~V~v~D~~t~~~~~~--i~~--g~~~~~v~~spdg~~l~v~~~-d-----~~V~v~D~~~~t~ 212 (543)
T 1nir_A 148 PNLFSVTLRD-----AGQIALVDGDSKKIVKV--IDT--GYAVHISRMSASGRYLLVIGR-D-----ARIDMIDLWAKEP 212 (543)
T ss_dssp GGEEEEEEGG-----GTEEEEEETTTCCEEEE--EEC--STTEEEEEECTTSCEEEEEET-T-----SEEEEEETTSSSC
T ss_pred CCEEEEEEcC-----CCeEEEEECCCceEEEE--Eec--CcccceEEECCCCCEEEEECC-C-----CeEEEEECcCCCC
Confidence 4566666543 24678889888775431 111 1114555554 4 45665543 2 67999999 666
Q ss_pred cEEEeCCCCCCcceeEEEEE-----CCeEEEEcccCCCCCCceeEEeecCCCceEEcccC-----------CccccceeE
Q psy14726 423 VWKEIAPMNFKRCYVSTAVH-----HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPM-----------NVERSDASA 486 (712)
Q Consensus 423 ~W~~~~~~~~~r~~~~~~~~-----~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-----------p~~r~~~~~ 486 (712)
+-. ..++....-..++.. +|+..++++.. .+++.++|..+.+-...-+. |.+|....+
T Consensus 213 ~~~--~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~----~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~ 286 (543)
T 1nir_A 213 TKV--AEIKIGIEARSVESSKFKGYEDRYTIAGAYW----PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAII 286 (543)
T ss_dssp EEE--EEEECCSEEEEEEECCSTTCTTTEEEEEEEE----SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEE
T ss_pred cEE--EEEecCCCcceEEeCCCcCCCCCEEEEEEcc----CCeEEEEeccccccceeecccCcccCccccccCCceEEEE
Confidence 532 222233333444443 55444444321 25688889877654322111 111221111
Q ss_pred EEE-CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CCE-EEEEcCCCCCCccceEEEEeCCCC
Q psy14726 487 TTL-QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HEC-IYVIGGFNGMSRMCNGEKYNPVTK 563 (712)
Q Consensus 487 ~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~v~~yd~~~~ 563 (712)
..- ++.+|+.+.. ...+..+|..+.+-..+..++..+.-+..+.. +++ +|+.+.. .+.|.++|..++
T Consensus 287 ~s~~~~~~~vs~~~-----~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~-----~~~v~v~D~~tg 356 (543)
T 1nir_A 287 ASHEHPEFIVNVKE-----TGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANN-----SNKVAVIDSKDR 356 (543)
T ss_dssp ECSSSSEEEEEETT-----TTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGG-----GTEEEEEETTTT
T ss_pred ECCCCCEEEEEECC-----CCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecC-----CCeEEEEECCCC
Confidence 122 4456655432 25688888876432111111222222223322 444 6665432 367888999988
Q ss_pred cEEEc---CCCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCC-----eEEEccCCC
Q psy14726 564 TWSQV---PDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTD-----EWYEATDMN 619 (712)
Q Consensus 564 ~W~~~---~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~-----~W~~~~~~p 619 (712)
+-... +..|.+..+.....- ++.+|+.+.... +.|-+||..+. .|+.+..++
T Consensus 357 ~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d----~~V~v~d~~~~~~~~~~~~~v~~l~ 417 (543)
T 1nir_A 357 RLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGD----GSISLIGTDPKNHPQYAWKKVAELQ 417 (543)
T ss_dssp EEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSS----SEEEEEECCTTTCTTTBTSEEEEEE
T ss_pred eEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCC----ceEEEEEeCCCCCchhcCeEEEEEE
Confidence 65443 233333223322211 377888764322 25778887762 377664443
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=95.53 E-value=0.87 Score=44.92 Aligned_cols=188 Identities=9% Similarity=0.077 Sum_probs=90.7
Q ss_pred ECCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCc-eEE
Q psy14726 395 IGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQ-WSL 473 (712)
Q Consensus 395 ~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~~ 473 (712)
.++..++.|+.+ ..+..||..++.-...-..............++..++.|+.+ ..+..||..... ...
T Consensus 27 ~~~~~l~s~~~d-----g~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~~~~~~~~~~~~~ 96 (313)
T 3odt_A 27 VDDSKVASVSRD-----GTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKD-----TMINGVPLFATSGEDP 96 (313)
T ss_dssp EETTEEEEEETT-----SEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETT-----SCEEEEETTCCTTSCC
T ss_pred cCCCEEEEEEcC-----CcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCC-----CeEEEEEeeecCCCCc
Confidence 345556677643 358888887766443322222222222223466777777754 346666654431 122
Q ss_pred cccCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccc
Q psy14726 474 IAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMC 553 (712)
Q Consensus 474 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~ 553 (712)
+..+............++..++.|+.++ .+..||.......... ...+.........++..++.|+.+ .
T Consensus 97 ~~~~~~~~~~i~~~~~~~~~l~~~~~d~-----~i~~~d~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~d-----~ 165 (313)
T 3odt_A 97 LYTLIGHQGNVCSLSFQDGVVISGSWDK-----TAKVWKEGSLVYNLQA-HNASVWDAKVVSFSENKFLTASAD-----K 165 (313)
T ss_dssp -CEECCCSSCEEEEEEETTEEEEEETTS-----EEEEEETTEEEEEEEC-CSSCEEEEEEEETTTTEEEEEETT-----S
T ss_pred ccchhhcccCEEEEEecCCEEEEEeCCC-----CEEEEcCCcEEEeccc-CCCceeEEEEccCCCCEEEEEECC-----C
Confidence 2222222222333444666777777653 5777883332222221 111111111222256666677654 4
Q ss_pred eEEEEeCCCCcEEEcCCCCCCccceEEEE-ECCEEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 554 NGEKYNPVTKTWSQVPDMYNPRSNFAIEV-IDDMIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 554 ~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
.+..||.....- .+... ....-.+++. -++. ++.|+.++ .+.+||..+.+
T Consensus 166 ~i~i~d~~~~~~-~~~~~-~~~~i~~~~~~~~~~-~~~~~~dg-----~i~i~d~~~~~ 216 (313)
T 3odt_A 166 TIKLWQNDKVIK-TFSGI-HNDVVRHLAVVDDGH-FISCSNDG-----LIKLVDMHTGD 216 (313)
T ss_dssp CEEEEETTEEEE-EECSS-CSSCEEEEEEEETTE-EEEEETTS-----EEEEEETTTCC
T ss_pred CEEEEecCceEE-EEecc-CcccEEEEEEcCCCe-EEEccCCC-----eEEEEECCchh
Confidence 677888432222 22111 1112222333 3667 77777655 57888887654
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=95.51 E-value=0.96 Score=44.64 Aligned_cols=222 Identities=7% Similarity=-0.044 Sum_probs=116.4
Q ss_pred EEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeC
Q psy14726 350 LFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIA 428 (712)
Q Consensus 350 i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 428 (712)
+++++.. ...+..||+.++ ...+.. + ...-.++++. ++.+|+.... ...+++||+.+++...+.
T Consensus 42 l~~~~~~-----~~~i~~~~~~~~-~~~~~~---~-~~~~~~l~~~~dg~l~v~~~~-----~~~i~~~d~~~g~~~~~~ 106 (296)
T 3e5z_A 42 VIFSDVR-----QNRTWAWSDDGQ-LSPEMH---P-SHHQNGHCLNKQGHLIACSHG-----LRRLERQREPGGEWESIA 106 (296)
T ss_dssp EEEEEGG-----GTEEEEEETTSC-EEEEES---S-CSSEEEEEECTTCCEEEEETT-----TTEEEEECSTTCCEEEEE
T ss_pred EEEEeCC-----CCEEEEEECCCC-eEEEEC---C-CCCcceeeECCCCcEEEEecC-----CCeEEEEcCCCCcEEEEe
Confidence 5665542 236889999887 554322 1 1222344443 6777766431 246899999888887653
Q ss_pred CCCC----CcceeEEEEECCeEEEE----cccC--------CCCCCceeEEeecCCCceEEcccCCccccceeEEEE--C
Q psy14726 429 PMNF----KRCYVSTAVHHDVIYAM----GGYN--------GQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--Q 490 (712)
Q Consensus 429 ~~~~----~r~~~~~~~~~~~iyv~----GG~~--------~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~ 490 (712)
.... .+....+..-+|++|+. |... .......++++|+. .+...+... ........+ +
T Consensus 107 ~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~---~~~~~gi~~s~d 182 (296)
T 3e5z_A 107 DSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRD---RVKPNGLAFLPS 182 (296)
T ss_dssp CEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECC---CSSEEEEEECTT
T ss_pred eccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecC---CCCCccEEECCC
Confidence 3211 11222333347889986 4321 01123579999987 555444221 111122333 5
Q ss_pred CEEEEEcccCCCCccCceEEeeCC-CCee-EE--eCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEE
Q psy14726 491 GKIYITGGFNGHNCLNSCEVYDPE-CNQW-TL--IEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWS 566 (712)
Q Consensus 491 ~~iyv~GG~~~~~~~~~v~~yd~~-~~~W-~~--~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 566 (712)
+++++.+..+ ..+++||.. +++. .. +-.........-+.--+|.||+..+ ..|.+||+......
T Consensus 183 g~~lv~~~~~-----~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~-------~~v~~~~~~g~~~~ 250 (296)
T 3e5z_A 183 GNLLVSDTGD-----NATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASAG-------DGVHVLTPDGDELG 250 (296)
T ss_dssp SCEEEEETTT-----TEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEET-------TEEEEECTTSCEEE
T ss_pred CCEEEEeCCC-----CeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEcC-------CeEEEECCCCCEEE
Confidence 6666544322 468888876 4544 11 1111111111112223678998872 57899999865554
Q ss_pred EcCCCCCCccceEEEEE--C-CEEEEEcccCCCceeeeEEEEECCCCeE
Q psy14726 567 QVPDMYNPRSNFAIEVI--D-DMIFAIGGFNGVTTIYHVECYDEKTDEW 612 (712)
Q Consensus 567 ~~~~~p~~r~~~~~~~~--~-~~i~v~GG~~~~~~~~~v~~yd~~~~~W 612 (712)
.+.. +.. -.+++.- + +.||+... ..++.|++++++-
T Consensus 251 ~~~~-~~~--~~~~~f~~~d~~~L~v~t~-------~~l~~~~~~~~~~ 289 (296)
T 3e5z_A 251 RVLT-PQT--TSNLCFGGPEGRTLYMTVS-------TEFWSIETNVRGL 289 (296)
T ss_dssp EEEC-SSC--CCEEEEESTTSCEEEEEET-------TEEEEEECSCCBC
T ss_pred EEEC-CCC--ceeEEEECCCCCEEEEEcC-------CeEEEEEcccccc
Confidence 4432 222 1222221 2 35666532 2589999887653
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=95.49 E-value=0.3 Score=50.91 Aligned_cols=147 Identities=9% Similarity=0.068 Sum_probs=76.0
Q ss_pred CEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCC-----CcceeEEEEE-CC-eEEEEcccCCCCCCceeEEeecCCC
Q psy14726 397 YNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNF-----KRCYVSTAVH-HD-VIYAMGGYNGQRRQNSVEKYNYTEN 469 (712)
Q Consensus 397 ~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~-----~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~~ 469 (712)
+.+++.|+.+ ..+..||..+.+....-..+. ...-.+++.. ++ .+++.|+.++. ...+..||..+.
T Consensus 178 ~~~l~~~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~--~~~i~~~d~~~~ 250 (416)
T 2pm9_A 178 AHVFASAGSS-----NFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN--DPSILIWDLRNA 250 (416)
T ss_dssp TTEEEEESSS-----SCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS--SCCCCEEETTST
T ss_pred CcEEEEEcCC-----CCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC--CceEEEEeCCCC
Confidence 5677777754 358999998877644333321 1222233333 23 57777765421 136888888775
Q ss_pred ceEEcccCC-ccccceeEEEE---CCEEEEEcccCCCCccCceEEeeCCCCeeEEe-CCCCCCCcceEEEEE-CC-EEEE
Q psy14726 470 QWSLIAPMN-VERSDASATTL---QGKIYITGGFNGHNCLNSCEVYDPECNQWTLI-EPMRHRRSGVSCIAY-HE-CIYV 542 (712)
Q Consensus 470 ~W~~~~~~p-~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~p~~r~~~~~~~~-~~-~iyv 542 (712)
.- .+..+. ........+.+ ++.+++.|+.++ .+..||..+.+-... .....+ . .+++.. ++ .+++
T Consensus 251 ~~-~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg-----~v~~wd~~~~~~~~~~~~~~~~-v-~~~~~s~~~~~~l~ 322 (416)
T 2pm9_A 251 NT-PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDN-----TVLLWNPESAEQLSQFPARGNW-C-FKTKFAPEAPDLFA 322 (416)
T ss_dssp TS-CSBCCCSCCSSCEEEEEECSSCSSCEEEEESSS-----EEEEECSSSCCEEEEEECSSSC-C-CCEEECTTCTTEEE
T ss_pred CC-CcEEeecCccCceeEEEeCCCCCCeEEEEeCCC-----CEEEeeCCCCccceeecCCCCc-e-EEEEECCCCCCEEE
Confidence 31 111121 11112223333 577888887653 588888877653222 111111 1 122222 34 6777
Q ss_pred EcCCCCCCccceEEEEeCCCC
Q psy14726 543 IGGFNGMSRMCNGEKYNPVTK 563 (712)
Q Consensus 543 ~GG~~~~~~~~~v~~yd~~~~ 563 (712)
.|+.+ ..+..||..+.
T Consensus 323 s~~~d-----~~i~iw~~~~~ 338 (416)
T 2pm9_A 323 CASFD-----NKIEVQTLQNL 338 (416)
T ss_dssp ECCSS-----SEEEEEESCCC
T ss_pred EEecC-----CcEEEEEccCC
Confidence 77754 45667776543
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=95.48 E-value=0.35 Score=50.38 Aligned_cols=195 Identities=9% Similarity=0.004 Sum_probs=96.2
Q ss_pred EEEEEeecCCCCccceEEEEECCCCcEEEeCC-CCCCcceeEEEEE-CCeEEEEcccCCCCCCceeEEeecCCCceEEcc
Q psy14726 398 NIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAP-MNFKRCYVSTAVH-HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA 475 (712)
Q Consensus 398 ~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~-~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 475 (712)
.+++.|+.+ ..+..||..+++....-. ......-.+++.. ++..++.|+.+ ..+.+||+.+.+-...-
T Consensus 145 ~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~ 214 (402)
T 2aq5_A 145 NVLLSAGCD-----NVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD-----KRVRVIEPRKGTVVAEK 214 (402)
T ss_dssp TEEEEEETT-----SCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT-----SEEEEEETTTTEEEEEE
T ss_pred CEEEEEcCC-----CEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecC-----CcEEEEeCCCCceeeee
Confidence 577777754 358999999887643321 1111222233332 56777777743 46999999887643221
Q ss_pred -cCCccc-cceeEEEECCEEEEEcccCCCCccCceEEeeCCCCee-EEeCCCCCCCcceEEEEE--CCEEEEEcCCCCCC
Q psy14726 476 -PMNVER-SDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQW-TLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMS 550 (712)
Q Consensus 476 -~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W-~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~ 550 (712)
...... ....+..-++++++.|.... .-..+..||..+..- .....+.....-..++.. +..+++.|+.+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~l~~g~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~d--- 289 (402)
T 2aq5_A 215 DRPHEGTRPVHAVFVSEGKILTTGFSRM--SERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGD--- 289 (402)
T ss_dssp ECSSCSSSCCEEEECSTTEEEEEEECTT--CCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTC---
T ss_pred ccCCCCCcceEEEEcCCCcEEEEeccCC--CCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCC---
Confidence 111111 12222222778777773111 124688888876442 111111222222223322 34566777543
Q ss_pred ccceEEEEeCCCCc--EEEcCCCCCCccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeEEEc
Q psy14726 551 RMCNGEKYNPVTKT--WSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 551 ~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
..+..||..+.+ ...+........-.+++...+..+++++. ..+.+|+..++....+
T Consensus 290 --g~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s~~------~~~~~~~l~~~~~~~i 348 (402)
T 2aq5_A 290 --SSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVNKC------EIARFYKLHERKCEPI 348 (402)
T ss_dssp --SCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGGGT------EEEEEEEEETTEEEEE
T ss_pred --CeEEEEEecCCCcceEeecccccCCcccceEEecccccceecc------eeEEEEEcCCCcEEEE
Confidence 467888887765 44443322111222333333322233221 2566777666665443
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=95.46 E-value=0.22 Score=50.15 Aligned_cols=189 Identities=13% Similarity=0.104 Sum_probs=97.9
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcce-eEEEEE---CCeEEEEcccCCCCCCceeEEeecCCCce
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCY-VSTAVH---HDVIYAMGGYNGQRRQNSVEKYNYTENQW 471 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~-~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 471 (712)
++..++.|+.+ ..+..||..+++...+..+...... .+++.. ++.+++.|+.+ ..+..||+.+.+|
T Consensus 24 ~g~~lasgs~D-----~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D-----~~v~iWd~~~~~~ 93 (316)
T 3bg1_A 24 YGTRLATCSSD-----RSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYD-----RKVIIWREENGTW 93 (316)
T ss_dssp GGCEEEEEETT-----TEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETT-----SCEEEECCSSSCC
T ss_pred CCCEEEEEeCC-----CeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECC-----CEEEEEECCCCcc
Confidence 45666777753 3578888877654333222211112 223332 26677777754 4588899988877
Q ss_pred EEcccCCccccceeEEEE--C--CEEEEEcccCCCCccCceEEeeCCCC-eeEEeCCCCCCCcceEEEEE----------
Q psy14726 472 SLIAPMNVERSDASATTL--Q--GKIYITGGFNGHNCLNSCEVYDPECN-QWTLIEPMRHRRSGVSCIAY---------- 536 (712)
Q Consensus 472 ~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~v~~yd~~~~-~W~~~~~~p~~r~~~~~~~~---------- 536 (712)
..+..+........++.+ + +.+++.|+.++ .+..||..+. .|.....+.........+..
T Consensus 94 ~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~-----~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 168 (316)
T 3bg1_A 94 EKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDG-----AISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLI 168 (316)
T ss_dssp CEEEEECCCSSCCCEEEECCTTTCSCEEEECSSS-----CEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC----
T ss_pred eEEEEccCCCCceEEEEECCCCCCcEEEEEcCCC-----CEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcccc
Confidence 655433221222223333 3 56777787664 4667776654 46543322111111001111
Q ss_pred ---------CCEEEEEcCCCCCCccceEEEEeCC-CCcEEEcCCCCCCccceEEEEE--C----CEEEEEcccCCCceee
Q psy14726 537 ---------HECIYVIGGFNGMSRMCNGEKYNPV-TKTWSQVPDMYNPRSNFAIEVI--D----DMIFAIGGFNGVTTIY 600 (712)
Q Consensus 537 ---------~~~iyv~GG~~~~~~~~~v~~yd~~-~~~W~~~~~~p~~r~~~~~~~~--~----~~i~v~GG~~~~~~~~ 600 (712)
.++.++.||.+ ..+..||.. ...|..+..+.........+.+ + +.+++.|+.++
T Consensus 169 ~~~~~~~~~~~~~l~sgs~D-----~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~----- 238 (316)
T 3bg1_A 169 DHPSGQKPNYIKRFASGGCD-----NLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDG----- 238 (316)
T ss_dssp --CCSCCCCCCCBEECCBTT-----SBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTC-----
T ss_pred ccccccCccccceEEEecCC-----CeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCC-----
Confidence 12466666654 345566665 3457666544332222223333 2 26778888765
Q ss_pred eEEEEECCC
Q psy14726 601 HVECYDEKT 609 (712)
Q Consensus 601 ~v~~yd~~~ 609 (712)
.+.+||..+
T Consensus 239 ~v~iw~~~~ 247 (316)
T 3bg1_A 239 RVFIWTCDD 247 (316)
T ss_dssp EEEEEECSS
T ss_pred eEEEEEccC
Confidence 577787765
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=95.46 E-value=0.6 Score=48.52 Aligned_cols=237 Identities=9% Similarity=0.035 Sum_probs=116.2
Q ss_pred EEEEeecCCC-----CCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCC--
Q psy14726 350 LFAIGGWSGG-----SPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVT-- 421 (712)
Q Consensus 350 i~~~GG~~~~-----~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~-- 421 (712)
+++.|...+. .....+..||..++.-... .........-.+++.. ++.+++.|+.+ ..+..||..+
T Consensus 27 ~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~v~vw~~~~~~ 100 (416)
T 2pm9_A 27 LLVSGTVSGTVDANFSTDSSLELWSLLAADSEKP-IASLQVDSKFNDLDWSHNNKIIAGALDN-----GSLELYSTNEAN 100 (416)
T ss_dssp EEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSC-SCCCCCSSCEEEEEECSSSSCEEEEESS-----SCEEEECCSSTT
T ss_pred EEEEEecCcccccccCCCCeEEEEEccCCCCCcE-EEEEecCCceEEEEECCCCCeEEEEccC-----CeEEEeeccccc
Confidence 6666643321 1233577888776542110 1111111222233333 56667777653 3578888876
Q ss_pred --C-cEEEeCCCCCCcceeEEEEE--CCeEEEEcccCCCCCCceeEEeecCCCc------eE-EcccCCccccceeEEEE
Q psy14726 422 --K-VWKEIAPMNFKRCYVSTAVH--HDVIYAMGGYNGQRRQNSVEKYNYTENQ------WS-LIAPMNVERSDASATTL 489 (712)
Q Consensus 422 --~-~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~------W~-~~~~~p~~r~~~~~~~~ 489 (712)
. .-..+..-. ..-.+++.. ++.+++.|+.+ ..+..||..+.+ -. .+............+.+
T Consensus 101 ~~~~~~~~~~~h~--~~v~~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 173 (416)
T 2pm9_A 101 NAINSMARFSNHS--SSVKTVKFNAKQDNVLASGGNN-----GEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAW 173 (416)
T ss_dssp SCCCEEEECCCSS--SCCCEEEECSSSTTBEEEECSS-----SCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEE
T ss_pred ccccchhhccCCc--cceEEEEEcCCCCCEEEEEcCC-----CeEEEEECCCCccccccccccccccccCCCCCeeEEEe
Confidence 1 222222111 111223332 26777777754 458888887765 11 11111111111222333
Q ss_pred --C-CEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCC-----CCcceEEEEE-CC-EEEEEcCCCCCCccceEEEEe
Q psy14726 490 --Q-GKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRH-----RRSGVSCIAY-HE-CIYVIGGFNGMSRMCNGEKYN 559 (712)
Q Consensus 490 --~-~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~-----~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd 559 (712)
+ +.+++.|+.++ .+..||..+.+....-..+. ...-.+++.. ++ .+++.|+.++. ...+..||
T Consensus 174 ~~~~~~~l~~~~~dg-----~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~--~~~i~~~d 246 (416)
T 2pm9_A 174 NQSLAHVFASAGSSN-----FASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN--DPSILIWD 246 (416)
T ss_dssp CSSCTTEEEEESSSS-----CEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS--SCCCCEEE
T ss_pred CCCCCcEEEEEcCCC-----CEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC--CceEEEEe
Confidence 3 57888887653 58899998876544333221 1122222323 23 57777765421 12677888
Q ss_pred CCCCcEEEcCCCC-CCccceEEEEE---CCEEEEEcccCCCceeeeEEEEECCCCeE
Q psy14726 560 PVTKTWSQVPDMY-NPRSNFAIEVI---DDMIFAIGGFNGVTTIYHVECYDEKTDEW 612 (712)
Q Consensus 560 ~~~~~W~~~~~~p-~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 612 (712)
..+.. ..+..+. ........+.+ ++.+++.|+.++ .+.+||+.+.+-
T Consensus 247 ~~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg-----~v~~wd~~~~~~ 297 (416)
T 2pm9_A 247 LRNAN-TPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDN-----TVLLWNPESAEQ 297 (416)
T ss_dssp TTSTT-SCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSS-----EEEEECSSSCCE
T ss_pred CCCCC-CCcEEeecCccCceeEEEeCCCCCCeEEEEeCCC-----CEEEeeCCCCcc
Confidence 87643 1111222 11122222333 677888888765 578888877643
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=95.44 E-value=0.22 Score=51.23 Aligned_cols=193 Identities=16% Similarity=0.122 Sum_probs=90.3
Q ss_pred CCEEEEEeecCCCCc-cceEEEEECCCCcEEEeCCC--CCCcc-eeEEEEE-CCeEEEEcccCCCCCCceeEEeecCCCc
Q psy14726 396 GYNIYVIGGFDGNEY-YNSCRCFNAVTKVWKEIAPM--NFKRC-YVSTAVH-HDVIYAMGGYNGQRRQNSVEKYNYTENQ 470 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~-~~~v~~yd~~~~~W~~~~~~--~~~r~-~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 470 (712)
++.+++.|+.+.... -..++.|+..+..-...... ..... -.+++.. +++++ .|+.+ ..+.+||..+++
T Consensus 53 DG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l-~~s~d-----g~v~lWd~~~~~ 126 (357)
T 4g56_B 53 DGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGIL-VASDS-----GAVELWEILEKE 126 (357)
T ss_dssp SSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEE-EEETT-----SCEEEC------
T ss_pred CCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEE-EEECC-----CEEEEeeccccc
Confidence 788888887543222 24577777655431110000 00111 1223333 45554 45433 358888887765
Q ss_pred eEEcccCCc-cccc-eeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--C-CEEEEE
Q psy14726 471 WSLIAPMNV-ERSD-ASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--H-ECIYVI 543 (712)
Q Consensus 471 W~~~~~~p~-~r~~-~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~-~~iyv~ 543 (712)
-........ +... -.++.+ +++.++.|+.++ .+..||..+++-... +........++.+ + +.+++.
T Consensus 127 ~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg-----~v~iwd~~~~~~~~~--~~~h~~~v~~v~~s~~~~~~~~s 199 (357)
T 4g56_B 127 SLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDF-----SVKVWDLSQKAVLKS--YNAHSSEVNCVAACPGKDTIFLS 199 (357)
T ss_dssp --CCCCEEECCCSSCEEEEEECSSSSEEEEEETTS-----CEEEEETTTTEEEEE--ECCCSSCEEEEEECTTCSSCEEE
T ss_pred eeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCC-----eEEEEECCCCcEEEE--EcCCCCCEEEEEEccCCCceeee
Confidence 332211111 1111 122222 677788887664 588899888764332 2211122222222 2 347777
Q ss_pred cCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE---CCEEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 544 GGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI---DDMIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 544 GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
||.+ ..+..||..+.+-...............+.+ ++.+++.|+.++ .+.+||+.+.+
T Consensus 200 ~~~d-----g~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~-----~i~~wd~~~~~ 260 (357)
T 4g56_B 200 CGED-----GRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETG-----NVSLVNIKNPD 260 (357)
T ss_dssp EETT-----SCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSS-----CEEEEESSCGG
T ss_pred eccC-----CceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeeccc-----ceeEEECCCCc
Confidence 7754 4577888877653332222222222233333 466888887655 57788877643
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=95.42 E-value=0.37 Score=54.97 Aligned_cols=250 Identities=6% Similarity=-0.089 Sum_probs=125.5
Q ss_pred CceEEEEeec-CCCCCCceEEEEECCCCcEEEcccCCCCCC--------------Cc-------ceEEEEE-CCEEEEEe
Q psy14726 347 HEILFAIGGW-SGGSPTDFVETYDTRADRWVKIEQVDPMGP--------------RA-------YHGTAVI-GYNIYVIG 403 (712)
Q Consensus 347 ~~~i~~~GG~-~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~--------------r~-------~~~~~~~-~~~lyv~G 403 (712)
.+..+++++. ..+.....++.+|..+++...+.......+ |. -.+.+.. +++.++++
T Consensus 47 dG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~ 126 (741)
T 2ecf_A 47 DGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFP 126 (741)
T ss_dssp TSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEE
T ss_pred CCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEE
Confidence 3444555554 332333478999999888765432111000 00 1222222 55555555
Q ss_pred ecCCCCccceEEEEECCCC---cEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCcc
Q psy14726 404 GFDGNEYYNSCRCFNAVTK---VWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVE 480 (712)
Q Consensus 404 G~~~~~~~~~v~~yd~~~~---~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~ 480 (712)
+. ..++.+|..++ .-..+.... .........-+|+..+++.. ..++++|..+.+...+......
T Consensus 127 ~~------~~i~~~d~~~~~~~~~~~l~~~~-~~~~~~~~SPDG~~la~~~~------~~i~~~d~~~g~~~~~~~~~~~ 193 (741)
T 2ecf_A 127 LG------GELYLYDLKQEGKAAVRQLTHGE-GFATDAKLSPKGGFVSFIRG------RNLWVIDLASGRQMQLTADGST 193 (741)
T ss_dssp ET------TEEEEEESSSCSTTSCCBCCCSS-SCEEEEEECTTSSEEEEEET------TEEEEEETTTTEEEECCCCCCS
T ss_pred eC------CcEEEEECCCCCcceEEEcccCC-cccccccCCCCCCEEEEEeC------CcEEEEecCCCCEEEeccCCcc
Confidence 53 67999999887 544443321 11222223346665555532 3799999998877666432211
Q ss_pred cc--------------ceeEEEE--CCEEEEEcccCCC----------------------------CccCceEEeeCCC-
Q psy14726 481 RS--------------DASATTL--QGKIYITGGFNGH----------------------------NCLNSCEVYDPEC- 515 (712)
Q Consensus 481 r~--------------~~~~~~~--~~~iyv~GG~~~~----------------------------~~~~~v~~yd~~~- 515 (712)
.. ......+ +|+.++++..++. .....++.+|..+
T Consensus 194 ~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~ 273 (741)
T 2ecf_A 194 TIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQ 273 (741)
T ss_dssp SEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTT
T ss_pred ceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCC
Confidence 00 0112222 5554444433221 1123788889888
Q ss_pred CeeEEeCCC-CCCCc-ceEEEEECCE-EEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCc---cceEEEE-ECCEEE
Q psy14726 516 NQWTLIEPM-RHRRS-GVSCIAYHEC-IYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPR---SNFAIEV-IDDMIF 588 (712)
Q Consensus 516 ~~W~~~~~~-p~~r~-~~~~~~~~~~-iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r---~~~~~~~-~~~~i~ 588 (712)
.+-..+... ..... ..... -+++ |++... +.......++.+|+.+.+...+....... .....+. -+++++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~-~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~ 351 (741)
T 2ecf_A 274 AQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQ-SRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSIL 351 (741)
T ss_dssp CCCEEECCCSCSSEEEEEEEE-EETTEEEEEEE-ETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEE
T ss_pred CceEEecCCCCcceEEEEEEe-CCCCEEEEEEe-cccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEE
Confidence 765555422 11111 11222 4444 544432 22233468999999998876653211110 0011222 267777
Q ss_pred EEcccCCCceeeeEEEEECCCCeEEEc
Q psy14726 589 AIGGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 589 v~GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
+.++.++. ..+|.+|.... +..+
T Consensus 352 ~~~~~~g~---~~l~~~~~~~~-~~~l 374 (741)
T 2ecf_A 352 WSSERTGF---QHLYRIDSKGK-AAAL 374 (741)
T ss_dssp EEECTTSS---CEEEEECSSSC-EEES
T ss_pred EEecCCCc---cEEEEEcCCCC-eeee
Confidence 76665442 46888887666 5555
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=95.42 E-value=1.1 Score=49.43 Aligned_cols=230 Identities=10% Similarity=0.010 Sum_probs=114.3
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCC----cE-EEcccCCCCCCCc-ceEEEEE---CCEEEEEeecCCCCccceEEEEE
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRAD----RW-VKIEQVDPMGPRA-YHGTAVI---GYNIYVIGGFDGNEYYNSCRCFN 418 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~----~W-~~~~~~~~~~~r~-~~~~~~~---~~~lyv~GG~~~~~~~~~v~~yd 418 (712)
+..+++|+ ...+..||..+. +- ..+. .. ... -.+++.. ++.+++.|+.+ ..+..||
T Consensus 30 g~~l~~~~------~~~v~v~~~~~~~~~~~~~~~~~---~h-~~~~v~~~~~sp~~~~~~l~s~~~d-----g~v~vw~ 94 (615)
T 1pgu_A 30 TNAIAYPC------GKSAFVRCLDDGDSKVPPVVQFT---GH-GSSVVTTVKFSPIKGSQYLCSGDES-----GKVIVWG 94 (615)
T ss_dssp TTEEEEEE------TTEEEEEECCSSCCSSCSEEEEC---TT-TTSCEEEEEECSSTTCCEEEEEETT-----SEEEEEE
T ss_pred CCEEEEec------CCeEEEEECCCCCCccccceEEe---cC-CCceEEEEEECcCCCCCEEEEecCC-----CEEEEEe
Confidence 44555555 136888888765 32 2211 11 111 2233333 45677777753 3577888
Q ss_pred CCCC------cEEEeCCCCCC-cceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE-
Q psy14726 419 AVTK------VWKEIAPMNFK-RCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL- 489 (712)
Q Consensus 419 ~~~~------~W~~~~~~~~~-r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~- 489 (712)
..++ ....+..+... ..-.+++. -+++.++.||.+. .....++.||.. + .+..+........++.+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~-~~~~~v~~~d~~--~--~~~~~~~~~~~v~~~~~~ 169 (615)
T 1pgu_A 95 WTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGR-DNFGVFISWDSG--N--SLGEVSGHSQRINACHLK 169 (615)
T ss_dssp EEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCS-SCSEEEEETTTC--C--EEEECCSCSSCEEEEEEC
T ss_pred CCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCC-CCccEEEEEECC--C--cceeeecCCccEEEEEEC
Confidence 7654 33332222211 11222222 3566666666432 224567888732 2 12222211122222333
Q ss_pred -CCE-EEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCc---ceEEEEE--C-CEEEEEcCCCCCCccceEEEEeCC
Q psy14726 490 -QGK-IYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRS---GVSCIAY--H-ECIYVIGGFNGMSRMCNGEKYNPV 561 (712)
Q Consensus 490 -~~~-iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~---~~~~~~~--~-~~iyv~GG~~~~~~~~~v~~yd~~ 561 (712)
++. +++.|+.+ ..+..||..+.+-... +..... ....+.+ + +..++.|+.+ ..+..||..
T Consensus 170 ~~~~~~l~~~~~d-----~~v~vwd~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~vwd~~ 237 (615)
T 1pgu_A 170 QSRPMRSMTVGDD-----GSVVFYQGPPFKFSAS--DRTHHKQGSFVRDVEFSPDSGEFVITVGSD-----RKISCFDGK 237 (615)
T ss_dssp SSSSCEEEEEETT-----TEEEEEETTTBEEEEE--ECSSSCTTCCEEEEEECSTTCCEEEEEETT-----CCEEEEETT
T ss_pred CCCCcEEEEEeCC-----CcEEEEeCCCcceeee--ecccCCCCceEEEEEECCCCCCEEEEEeCC-----CeEEEEECC
Confidence 343 67777655 4688888776653322 221111 2222222 4 6677777654 468899988
Q ss_pred CCcEEEcC-CC--CCCccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeEEE
Q psy14726 562 TKTWSQVP-DM--YNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYE 614 (712)
Q Consensus 562 ~~~W~~~~-~~--p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 614 (712)
+.+....- .. .....-.+++..++..++.|+.++ .+.+||..+.+...
T Consensus 238 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~-----~i~~wd~~~~~~~~ 288 (615)
T 1pgu_A 238 SGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADA-----TIRVWDVTTSKCVQ 288 (615)
T ss_dssp TCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTS-----EEEEEETTTTEEEE
T ss_pred CCCEeEEecccccccCCceEEEEEcCCCEEEEEcCCC-----cEEEEECCCCcEEE
Confidence 77654432 10 111111222222777888888664 57889988776543
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.39 E-value=0.25 Score=50.64 Aligned_cols=151 Identities=15% Similarity=0.153 Sum_probs=78.2
Q ss_pred EEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCC-cccc-ceeEEEE--CCEEEEEcccCCCCccCceEEeeCC
Q psy14726 439 TAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMN-VERS-DASATTL--QGKIYITGGFNGHNCLNSCEVYDPE 514 (712)
Q Consensus 439 ~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p-~~r~-~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~ 514 (712)
++...+.-++.|+.+ ..|..||..+++-....... .+.. .-.++.+ +++.++.|+.++ .+.++|..
T Consensus 88 ~~~s~d~~l~~~s~d-----g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~-----~i~iwd~~ 157 (344)
T 4gqb_B 88 LTWVGERGILVASDS-----GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDI-----CIKVWDLA 157 (344)
T ss_dssp EEEETTTEEEEEETT-----SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETT
T ss_pred EEEeCCCeEEEEECC-----CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCC-----eEEEEECC
Confidence 344454445566543 46888998876532221111 1111 1122223 677888887664 58889988
Q ss_pred CCeeEEeCCCCCCCcceEEEEE--C-CEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE---CCEEE
Q psy14726 515 CNQWTLIEPMRHRRSGVSCIAY--H-ECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI---DDMIF 588 (712)
Q Consensus 515 ~~~W~~~~~~p~~r~~~~~~~~--~-~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~i~ 588 (712)
+++-... +.........+.+ + ..+++.|+.+ ..+..||..+.+-...-...........+.+ ++.++
T Consensus 158 ~~~~~~~--~~~h~~~V~~~~~~~~~~~~l~s~s~D-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l 230 (344)
T 4gqb_B 158 QQVVLSS--YRAHAAQVTCVAASPHKDSVFLSCSED-----NRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVF 230 (344)
T ss_dssp TTEEEEE--ECCCSSCEEEEEECSSCTTEEEEEETT-----SCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEE
T ss_pred CCcEEEE--EcCcCCceEEEEecCCCCCceeeeccc-----cccccccccccceeeeeecceeeccceeeeecCCCCcce
Confidence 8753222 2211122222222 3 3577777765 4678899887654332211111111222222 56788
Q ss_pred EEcccCCCceeeeEEEEECCCCe
Q psy14726 589 AIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 589 v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
+.|+.++ .+.+||..+++
T Consensus 231 ~sg~~dg-----~v~~wd~~~~~ 248 (344)
T 4gqb_B 231 VFGDENG-----TVSLVDTKSTS 248 (344)
T ss_dssp EEEETTS-----EEEEEESCC--
T ss_pred EEeccCC-----cEEEEECCCCc
Confidence 8888765 57888887653
|
| >1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2 | Back alignment and structure |
|---|
Probab=95.36 E-value=0.0068 Score=51.67 Aligned_cols=86 Identities=15% Similarity=0.265 Sum_probs=63.0
Q ss_pred cEEEEecCCcEEeceeeeecccCHHHHHhhcCC----CCcCCccceEEcCCCCHHHHHHHhhhhccCceecChh-hHHHH
Q psy14726 94 DATIVLADNSHFPIHRNILCACSDYFRALFTTS----LHDQEKFSLVEIPGVDASVMTSLIEYAYLRKLHITED-NVASL 168 (712)
Q Consensus 94 Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~----~~e~~~~~~i~l~~~~~~~f~~~l~~~Yt~~~~i~~~-~~~~l 168 (712)
=|+|.| +|+.|..-+..|..... .||... ...... .++.| |=++..|+.||+|+-+|++.+..+ .+..+
T Consensus 14 ~V~LNV-GG~~F~t~~~TL~~~p~---S~L~~~~~~~~~~~~~-g~~Fi-DRdp~~F~~ILnflR~G~l~~p~~~~~~~l 87 (124)
T 1s1g_A 14 LIVLNV-SGRRFQTWRTTLERYPD---TLLGSTEKEFFFNEDT-KEYFF-DRDPEVFRCVLNFYRTGKLHYPRYECISAY 87 (124)
T ss_dssp EEEEEE-TTEEEEEEHHHHTTSTT---SSTTSSGGGGTBCSSS-CSEEE-CSCHHHHHHHHHHHHHSCBCCCTTSCHHHH
T ss_pred EEEEEe-CCEEEEEeHHHHhcCCC---ceecccCCcccccCCC-CcEEE-cCChHHHHHHHHHHhcCCCCCCCCcCHHHH
Confidence 378888 99999999999976532 233321 111223 55666 469999999999999999987654 47889
Q ss_pred HHHhhhcChHHHH-HHHH
Q psy14726 169 LLATDFFCMSKAQ-DLCC 185 (712)
Q Consensus 169 l~~A~~~~i~~L~-~~c~ 185 (712)
++-|++|+|+.+. +.|+
T Consensus 88 ~~Ea~fy~i~~l~l~~cC 105 (124)
T 1s1g_A 88 DDELAFYGILPEIIGDCC 105 (124)
T ss_dssp HHHHHHTTCCGGGBCHHH
T ss_pred HHHHHHcCCChHHHHHHH
Confidence 9999999998873 4443
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=95.36 E-value=0.75 Score=46.95 Aligned_cols=113 Identities=12% Similarity=0.097 Sum_probs=56.2
Q ss_pred EEEEEeecCCCC-ccceEEEEECCCCcEEEeCCCCCCcceeEEEEECC-eEEEEcccCCCCCCceeEEeecCCCceEEcc
Q psy14726 398 NIYVIGGFDGNE-YYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHD-VIYAMGGYNGQRRQNSVEKYNYTENQWSLIA 475 (712)
Q Consensus 398 ~lyv~GG~~~~~-~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 475 (712)
..+++|.+.... ..-.+|.+|+.++++..+.........+.+..-++ .||+.+........-.+|.+|..+.+.+.+.
T Consensus 14 ~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~ 93 (361)
T 3scy_A 14 LTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLN 93 (361)
T ss_dssp EEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEE
T ss_pred eEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEee
Confidence 344567664322 12235667888888876654422222222233345 4666654321111223455566667777776
Q ss_pred cCCccccceeEEEECCE-EEEEcccCCCCccCceEEeeCCC
Q psy14726 476 PMNVERSDASATTLQGK-IYITGGFNGHNCLNSCEVYDPEC 515 (712)
Q Consensus 476 ~~p~~r~~~~~~~~~~~-iyv~GG~~~~~~~~~v~~yd~~~ 515 (712)
..+...........+++ +|+.+..+ ..+..|+..+
T Consensus 94 ~~~~~~~~p~~~~~dg~~l~~~~~~~-----~~v~~~~~~~ 129 (361)
T 3scy_A 94 TQKTMGADPCYLTTNGKNIVTANYSG-----GSITVFPIGQ 129 (361)
T ss_dssp EEECSSSCEEEEEECSSEEEEEETTT-----TEEEEEEBCT
T ss_pred EeccCCCCcEEEEECCCEEEEEECCC-----CEEEEEEeCC
Confidence 55433333333333554 66654322 4577777654
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=95.34 E-value=1.7 Score=43.52 Aligned_cols=226 Identities=10% Similarity=0.051 Sum_probs=118.4
Q ss_pred ceEEEEECCCCcEEEcccCCCC----------------CCCcceEEEEE--CCEEEEEeecCCCCccceEEEEECCCCcE
Q psy14726 363 DFVETYDTRADRWVKIEQVDPM----------------GPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKVW 424 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~----------------~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W 424 (712)
..+..||+..+.+..+...... ....-+++++. ++.|||.... ..+.++|+.++..
T Consensus 40 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~------~~i~~~d~~~g~~ 113 (322)
T 2fp8_A 40 GRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY------YHLSVVGSEGGHA 113 (322)
T ss_dssp SEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT------TEEEEECTTCEEC
T ss_pred CeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC------CCEEEEeCCCCEE
Confidence 4688899888776653211100 00123566666 5789887431 2488999887766
Q ss_pred EEeCCCCCC---cceeEEEE-E-CCeEEEEcccCC------------CCCCceeEEeecCCCceEEccc-CCccccceeE
Q psy14726 425 KEIAPMNFK---RCYVSTAV-H-HDVIYAMGGYNG------------QRRQNSVEKYNYTENQWSLIAP-MNVERSDASA 486 (712)
Q Consensus 425 ~~~~~~~~~---r~~~~~~~-~-~~~iyv~GG~~~------------~~~~~~v~~yd~~~~~W~~~~~-~p~~r~~~~~ 486 (712)
+.+...... ..-..+++ - +|.||+.-.... ......+++||+.+.+...+.. +.. ..+.
T Consensus 114 ~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~---p~gi 190 (322)
T 2fp8_A 114 TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHV---PGGA 190 (322)
T ss_dssp EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEESC---CCEE
T ss_pred EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCcc---Ccce
Confidence 554322111 12233444 3 578998632110 0123579999998887654422 111 1222
Q ss_pred EEE-CC-EEEEEcccCCCCccCceEEeeCCC---CeeEEeCCCCCCCcceEEEEE-CCEEEEEcCCCCC-----CccceE
Q psy14726 487 TTL-QG-KIYITGGFNGHNCLNSCEVYDPEC---NQWTLIEPMRHRRSGVSCIAY-HECIYVIGGFNGM-----SRMCNG 555 (712)
Q Consensus 487 ~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~---~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~-----~~~~~v 555 (712)
+.- ++ .|||.-.. .+.+.+||... ..++.+..++. -.+++.- +|.|||....... .....+
T Consensus 191 a~~~dg~~lyv~d~~-----~~~I~~~~~~~~~~~~~~~~~~~~g---P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v 262 (322)
T 2fp8_A 191 EVSADSSFVLVAEFL-----SHQIVKYWLEGPKKGTAEVLVKIPN---PGNIKRNADGHFWVSSSEELDGNMHGRVDPKG 262 (322)
T ss_dssp EECTTSSEEEEEEGG-----GTEEEEEESSSTTTTCEEEEEECSS---EEEEEECTTSCEEEEEEEETTSSTTSCEEEEE
T ss_pred EECCCCCEEEEEeCC-----CCeEEEEECCCCcCCccceEEeCCC---CCCeEECCCCCEEEEecCcccccccCCCccEE
Confidence 322 33 58887432 25789998875 34444433332 1223222 4679987532100 113568
Q ss_pred EEEeCCCCcEEEcCCCCC--CccceEEEEECCEEEEEcccCCCceeeeEEEEECCCC
Q psy14726 556 EKYNPVTKTWSQVPDMYN--PRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTD 610 (712)
Q Consensus 556 ~~yd~~~~~W~~~~~~p~--~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 610 (712)
.+||+....-..+..... .....+++.-++.|||.+..+ +.+.+|++..+
T Consensus 263 ~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~-----~~i~~~~~~~~ 314 (322)
T 2fp8_A 263 IKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFH-----GSVGILVYDKK 314 (322)
T ss_dssp EEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEECSSC-----SEEEEEEC---
T ss_pred EEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEeecCC-----CceEEEecccc
Confidence 999997554444432110 122334455688999875432 36788887643
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=95.34 E-value=1.8 Score=49.15 Aligned_cols=235 Identities=6% Similarity=-0.126 Sum_probs=115.5
Q ss_pred ceEEEEECCCC---cEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCc----
Q psy14726 363 DFVETYDTRAD---RWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKR---- 434 (712)
Q Consensus 363 ~~v~~~d~~~~---~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r---- 434 (712)
..++.+|..++ ....+... .......+.. +++.++++.. +.++.+|..+++...+.......
T Consensus 129 ~~i~~~d~~~~~~~~~~~l~~~----~~~~~~~~~SPDG~~la~~~~------~~i~~~d~~~g~~~~~~~~~~~~~~~g 198 (741)
T 2ecf_A 129 GELYLYDLKQEGKAAVRQLTHG----EGFATDAKLSPKGGFVSFIRG------RNLWVIDLASGRQMQLTADGSTTIGNG 198 (741)
T ss_dssp TEEEEEESSSCSTTSCCBCCCS----SSCEEEEEECTTSSEEEEEET------TEEEEEETTTTEEEECCCCCCSSEEES
T ss_pred CcEEEEECCCCCcceEEEcccC----CcccccccCCCCCCEEEEEeC------CcEEEEecCCCCEEEeccCCccceecc
Confidence 57888998876 43332111 1112223333 5655555542 37999999998877765433210
Q ss_pred ------------ceeEEEEECCeEEEEcccCCC----------------------------CCCceeEEeecCC-CceEE
Q psy14726 435 ------------CYVSTAVHHDVIYAMGGYNGQ----------------------------RRQNSVEKYNYTE-NQWSL 473 (712)
Q Consensus 435 ------------~~~~~~~~~~~iyv~GG~~~~----------------------------~~~~~v~~yd~~~-~~W~~ 473 (712)
.......-+|+.++++..++. .....++.+|..+ .+-..
T Consensus 199 ~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~ 278 (741)
T 2ecf_A 199 IAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQW 278 (741)
T ss_dssp CCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEE
T ss_pred ccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEE
Confidence 111222335554444433221 1123788899888 76554
Q ss_pred cccC-Cc-cccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCC----CcceEEEEECCEEEEEcCCC
Q psy14726 474 IAPM-NV-ERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHR----RSGVSCIAYHECIYVIGGFN 547 (712)
Q Consensus 474 ~~~~-p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~----r~~~~~~~~~~~iyv~GG~~ 547 (712)
+... .. ......+. -+|+..+++..+......+++.+|+.+++...+...... .....+..-++++++.++.+
T Consensus 279 ~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~ 357 (741)
T 2ecf_A 279 IDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERT 357 (741)
T ss_dssp ECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTT
T ss_pred ecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCC
Confidence 4321 11 11111222 444444444332223346799999999887665321111 11122233367776666543
Q ss_pred CCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE--CC-EEEEEcccCCCceeeeEEEEECCCCeEEEc
Q psy14726 548 GMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DD-MIFAIGGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 548 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
+ ...++.+|.... +..+..... .-...+.+ ++ .|++.+..++ .....+|..+.....-..+
T Consensus 358 g---~~~l~~~~~~~~-~~~l~~~~~--~v~~~~~~s~dg~~l~~~~~~~~-~~~~~l~~~~~~g~~~~~l 421 (741)
T 2ecf_A 358 G---FQHLYRIDSKGK-AAALTHGNW--SVDELLAVDEKAGLAYFRAGIES-ARESQIYAVPLQGGQPQRL 421 (741)
T ss_dssp S---SCEEEEECSSSC-EEESCCSSS--CEEEEEEEETTTTEEEEEECSSC-TTCBEEEEEETTCCCCEEC
T ss_pred C---ccEEEEEcCCCC-eeeeeecce--EEEeEeEEeCCCCEEEEEEeCCC-CceEEEEEEEcCCCCeeec
Confidence 3 357888887666 666643221 11122222 44 5666655332 1123466666544433333
|
| >3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2 | Back alignment and structure |
|---|
Probab=95.32 E-value=0.0027 Score=53.43 Aligned_cols=84 Identities=17% Similarity=0.128 Sum_probs=64.7
Q ss_pred EEEEecCCcEEeceeeeecccC-HHHHHhhcCCC-CcCCccceEEcCCCCHHHHHHHhhhhccCceecChh-hHHHHHHH
Q psy14726 95 ATIVLADNSHFPIHRNILCACS-DYFRALFTTSL-HDQEKFSLVEIPGVDASVMTSLIEYAYLRKLHITED-NVASLLLA 171 (712)
Q Consensus 95 v~l~v~~~~~~~~Hk~vL~~~S-~yF~~mf~~~~-~e~~~~~~i~l~~~~~~~f~~~l~~~Yt~~~~i~~~-~~~~ll~~ 171 (712)
|+|.| +|+.|...+..|.... ..+.+||.+.. ..... .++.| |=++..|+.||+|+-+|++.++.+ .+..+++-
T Consensus 7 V~LNV-GG~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~-g~~Fi-DRdp~~F~~ILnylR~G~l~~p~~~~~~~~~~E 83 (115)
T 3kvt_A 7 VIINV-GGIRHETYKATLKKIPATRLSRLTEGMLNYDPVL-NEYFF-DRHPGVFAQIINYYRSGKLHYPTDVCGPLFEEE 83 (115)
T ss_dssp EEEEE-TTEEEEEEHHHHTTSCSSTTTTCCTTSTTEETTT-TEEEE-CSCTTTHHHHHHHHHHSCBCCCSSSCHHHHHHH
T ss_pred EEEEE-CCEEEEecHHHHhcCCCccHHHHhcCCCCCCCCC-CcEEE-ecChHHHHHHHHHhcCCCCCCCCcccHHHHHHH
Confidence 78889 9999999999998763 34666776432 11233 56766 578999999999999999977654 46789999
Q ss_pred hhhcChHHHH
Q psy14726 172 TDFFCMSKAQ 181 (712)
Q Consensus 172 A~~~~i~~L~ 181 (712)
|.+|+|++..
T Consensus 84 a~fy~i~~~~ 93 (115)
T 3kvt_A 84 LEFWGLDSNQ 93 (115)
T ss_dssp HHHHTCCGGG
T ss_pred HHHhCCChHH
Confidence 9999997653
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=95.28 E-value=2.7 Score=41.96 Aligned_cols=229 Identities=9% Similarity=0.019 Sum_probs=112.6
Q ss_pred eEEEEeecCCCCCCceEEEEECCCCc----EEEcccCCCCCCCcceEEEEE-CCE-EEEEeecCCCCccceEEEEEC-CC
Q psy14726 349 ILFAIGGWSGGSPTDFVETYDTRADR----WVKIEQVDPMGPRAYHGTAVI-GYN-IYVIGGFDGNEYYNSCRCFNA-VT 421 (712)
Q Consensus 349 ~i~~~GG~~~~~~~~~v~~~d~~~~~----W~~~~~~~~~~~r~~~~~~~~-~~~-lyv~GG~~~~~~~~~v~~yd~-~~ 421 (712)
..++.|+.+ ..+..||..++. ...+. .....-.+++.. ++. .++.|+.+ ..+..||. .+
T Consensus 24 ~~l~~~~~d-----~~v~iw~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~~wd~~~~ 89 (342)
T 1yfq_A 24 SLLLITSWD-----GSLTVYKFDIQAKNVDLLQSL----RYKHPLLCCNFIDNTDLQIYVGTVQ-----GEILKVDLIGS 89 (342)
T ss_dssp TEEEEEETT-----SEEEEEEEETTTTEEEEEEEE----ECSSCEEEEEEEESSSEEEEEEETT-----SCEEEECSSSS
T ss_pred CEEEEEcCC-----CeEEEEEeCCCCccccceeee----ecCCceEEEEECCCCCcEEEEEcCC-----CeEEEEEeccC
Confidence 345556532 357777766555 32221 111222334443 666 77777754 35899999 88
Q ss_pred CcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCc-------eEEcccCCccccceeEEEECCEEE
Q psy14726 422 KVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQ-------WSLIAPMNVERSDASATTLQGKIY 494 (712)
Q Consensus 422 ~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~-------W~~~~~~p~~r~~~~~~~~~~~iy 494 (712)
++...+...+....-.+++...+..++.|+.+ ..+..||+.+.. ...+..+.....-.+++...+. +
T Consensus 90 ~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-l 163 (342)
T 1yfq_A 90 PSFQALTNNEANLGICRICKYGDDKLIAASWD-----GLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR-L 163 (342)
T ss_dssp SSEEECBSCCCCSCEEEEEEETTTEEEEEETT-----SEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE-E
T ss_pred CceEeccccCCCCceEEEEeCCCCEEEEEcCC-----CeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc-E
Confidence 87766654212222223333336666666643 467888876400 2222223322222233333445 5
Q ss_pred EEcccCCCCccCceEEeeCCC-Ce--eEEeCCCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCC------
Q psy14726 495 ITGGFNGHNCLNSCEVYDPEC-NQ--WTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTK------ 563 (712)
Q Consensus 495 v~GG~~~~~~~~~v~~yd~~~-~~--W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~------ 563 (712)
+.|+.+ ..+..||..+ .. ...... +....-.++... ++..++.|+.+ ..+..||....
T Consensus 164 ~~~~~d-----~~i~i~d~~~~~~~~~~~~~~-~~~~~i~~i~~~~~~~~~l~~~~~d-----g~i~i~~~~~~~~~~~~ 232 (342)
T 1yfq_A 164 IVGMNN-----SQVQWFRLPLCEDDNGTIEES-GLKYQIRDVALLPKEQEGYACSSID-----GRVAVEFFDDQGDDYNS 232 (342)
T ss_dssp EEEEST-----TEEEEEESSCCTTCCCEEEEC-SCSSCEEEEEECSGGGCEEEEEETT-----SEEEEEECCTTCCSTTC
T ss_pred EEEeCC-----CeEEEEECCccccccceeeec-CCCCceeEEEECCCCCCEEEEEecC-----CcEEEEEEcCCCccccc
Confidence 556544 3688898877 33 222211 111122233333 46677777753 34555554332
Q ss_pred --cEEEcCCCC--C---CccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCeEE
Q psy14726 564 --TWSQVPDMY--N---PRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEWY 613 (712)
Q Consensus 564 --~W~~~~~~p--~---~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 613 (712)
......... . .......+.+ ++++++.|+.++ .+.+||..+++-.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg-----~i~vwd~~~~~~~ 286 (342)
T 1yfq_A 233 SKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDG-----IISCWNLQTRKKI 286 (342)
T ss_dssp TTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTS-----CEEEEETTTTEEE
T ss_pred ccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCc-----eEEEEcCccHhHh
Confidence 222111110 0 0112222333 677778887665 5889999887653
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=95.27 E-value=0.22 Score=51.60 Aligned_cols=197 Identities=9% Similarity=-0.080 Sum_probs=100.3
Q ss_pred cceEEEEECCCCcEEEeCCCCCCcceeEEEEE-CCe-EEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEE
Q psy14726 411 YNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH-HDV-IYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATT 488 (712)
Q Consensus 411 ~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~ 488 (712)
...++.+|+.+++...+...+ ....+....- ++. |+.............++.+|..+..+..+.. ..+........
T Consensus 167 ~~~l~~~d~~~g~~~~~~~~~-~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~-~~~~~~~~~~~ 244 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIHQDT-AWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE-HAEGESCTHEF 244 (396)
T ss_dssp CEEEEEEETTTCCEEEEEEES-SCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC-CCTTEEEEEEE
T ss_pred cceEEEEECCCCcEEeeccCC-cccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec-cCCCccccceE
Confidence 357899999998877665321 1122222223 344 4443321111122579999998888777654 21111122223
Q ss_pred E--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CCEEEEEcCCCC-----------CCccce
Q psy14726 489 L--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HECIYVIGGFNG-----------MSRMCN 554 (712)
Q Consensus 489 ~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~-----------~~~~~~ 554 (712)
+ +|+.+++.+.........++.+|..+++...+...+. .. ....- +++++++++.+. ......
T Consensus 245 ~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~--~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~ 321 (396)
T 3c5m_A 245 WIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP--CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPF 321 (396)
T ss_dssp ECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS--EE-EEEECSSSSEEEEEECCC----------CCCCCCE
T ss_pred ECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC--CC-CCccCCCCceEEEecCCcceeeccccccccCCCCc
Confidence 3 5553333332221222449999999988777765442 22 23333 677666644221 112367
Q ss_pred EEEEeCCCCcEEEcCCCCCCc---------cceEEE-EECC-EEEEEcccCCCceeeeEEEEECCCCeEEEc
Q psy14726 555 GEKYNPVTKTWSQVPDMYNPR---------SNFAIE-VIDD-MIFAIGGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 555 v~~yd~~~~~W~~~~~~p~~r---------~~~~~~-~~~~-~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
++.+|+.+.+...+...+..- .....+ .-++ .|++.+...+ ...++.+|..++.++.+
T Consensus 322 i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~---~~~l~~~~~~~~~~~~~ 390 (396)
T 3c5m_A 322 LYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEG---VPAIYIADVPESYKHLE 390 (396)
T ss_dssp EEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTS---SCEEEEEECCTTCC---
T ss_pred EEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCC---CceEEEEEEcccccccc
Confidence 999999887765553322100 011111 2244 4555443332 23689999888887664
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=95.27 E-value=2.1 Score=43.14 Aligned_cols=138 Identities=10% Similarity=0.123 Sum_probs=71.7
Q ss_pred eEEEEECCCCcEE-EcccCCCC-CCCcceEEEEE-C----CEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcce
Q psy14726 364 FVETYDTRADRWV-KIEQVDPM-GPRAYHGTAVI-G----YNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCY 436 (712)
Q Consensus 364 ~v~~~d~~~~~W~-~~~~~~~~-~~r~~~~~~~~-~----~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~ 436 (712)
.+..||..+++.. .+.....+ ....-.+++.. + +.+++.|+.+ ..+..||..+++-...-.-. ...-
T Consensus 45 ~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d-----g~i~v~d~~~~~~~~~~~~~-~~~i 118 (366)
T 3k26_A 45 RVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSR-----GIIRIINPITMQCIKHYVGH-GNAI 118 (366)
T ss_dssp EEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETT-----CEEEEECTTTCCEEEEEESC-CSCE
T ss_pred EEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCC-----CEEEEEEchhceEeeeecCC-CCcE
Confidence 5778887755432 22111111 11222333333 3 5788888754 36889998876643221111 1112
Q ss_pred eEEEEE--CCeEEEEcccCCCCCCceeEEeecCCCceEEc-ccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEe
Q psy14726 437 VSTAVH--HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI-APMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVY 511 (712)
Q Consensus 437 ~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~y 511 (712)
.+++.. ++.+++.|+.+ ..+..||..+.+-... ..+.........+.+ ++..++.||.++ .+..|
T Consensus 119 ~~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~i~ 188 (366)
T 3k26_A 119 NELKFHPRDPNLLLSVSKD-----HALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDH-----SLKLW 188 (366)
T ss_dssp EEEEECSSCTTEEEEEETT-----SCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTS-----CEEEE
T ss_pred EEEEECCCCCCEEEEEeCC-----CeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCC-----CEEEE
Confidence 223332 56788888754 4688999887764332 111222222233333 566777777653 57788
Q ss_pred eCCCCe
Q psy14726 512 DPECNQ 517 (712)
Q Consensus 512 d~~~~~ 517 (712)
|..+.+
T Consensus 189 d~~~~~ 194 (366)
T 3k26_A 189 RINSKR 194 (366)
T ss_dssp ESCSHH
T ss_pred ECCCCc
Confidence 877653
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=95.26 E-value=5 Score=44.99 Aligned_cols=118 Identities=14% Similarity=0.157 Sum_probs=67.9
Q ss_pred CcCCCceEEEEeecCCCCCCceEEEEECCCCc--EEEcccCCCCC--------CCcceEEEEECCEEEEEeecCCCCccc
Q psy14726 343 PRVPHEILFAIGGWSGGSPTDFVETYDTRADR--WVKIEQVDPMG--------PRAYHGTAVIGYNIYVIGGFDGNEYYN 412 (712)
Q Consensus 343 pr~~~~~i~~~GG~~~~~~~~~v~~~d~~~~~--W~~~~~~~~~~--------~r~~~~~~~~~~~lyv~GG~~~~~~~~ 412 (712)
|-...+.||+... ...+.++|..+++ |..- ...+. .....+.++.+++||+... ..
T Consensus 62 P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------dg 127 (668)
T 1kv9_A 62 PLFHDGVIYTSMS------WSRVIAVDAASGKELWRYD--PEVAKVKARTSCCDAVNRGVALWGDKVYVGTL------DG 127 (668)
T ss_dssp CEEETTEEEEEEG------GGEEEEEETTTCCEEEEEC--CCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT------TS
T ss_pred CEEECCEEEEECC------CCeEEEEECCCChhceEEC--CCCCccccccccccCCccceEEECCEEEEEcC------CC
Confidence 3334556666543 2468899987664 8762 22110 0112334566888887642 24
Q ss_pred eEEEEECCCCc--EEEeCCCCC--CcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCc--eEEc
Q psy14726 413 SCRCFNAVTKV--WKEIAPMNF--KRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQ--WSLI 474 (712)
Q Consensus 413 ~v~~yd~~~~~--W~~~~~~~~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~ 474 (712)
.++.+|..|++ |+.-..-+. .....+-++.++.||+..+.........++.||+.+.+ |+.-
T Consensus 128 ~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 128 RLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp EEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 69999999886 875432211 11222345678888885432222234679999998865 8753
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=95.24 E-value=5 Score=45.59 Aligned_cols=247 Identities=7% Similarity=-0.027 Sum_probs=126.3
Q ss_pred CCCceEEEEECC---CCcEEEcccCC-CCCCC-cceEEEEE--CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCC
Q psy14726 360 SPTDFVETYDTR---ADRWVKIEQVD-PMGPR-AYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNF 432 (712)
Q Consensus 360 ~~~~~v~~~d~~---~~~W~~~~~~~-~~~~r-~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~ 432 (712)
.....++..+.. ...|..+-... +.... ........ +++.++++...++.....++.+|..+++...... +.
T Consensus 130 ~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~-~~ 208 (741)
T 1yr2_A 130 MNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL-KW 208 (741)
T ss_dssp CSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE-EE
T ss_pred CeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC-CC
Confidence 334567777766 56666542111 11111 11122222 6666666654433334579999999998765311 11
Q ss_pred CcceeEEEEECCeEEEEcccCCC---------CCCceeEEeecCCCce--EEcccCCccccceeEEEE--CCEEEEEccc
Q psy14726 433 KRCYVSTAVHHDVIYAMGGYNGQ---------RRQNSVEKYNYTENQW--SLIAPMNVERSDASATTL--QGKIYITGGF 499 (712)
Q Consensus 433 ~r~~~~~~~~~~~iyv~GG~~~~---------~~~~~v~~yd~~~~~W--~~~~~~p~~r~~~~~~~~--~~~iyv~GG~ 499 (712)
... .+.+...++-++++..... .....+++++..+..- ..+-..+........+.+ +|+..++...
T Consensus 209 ~~~-~~~~wspD~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~ 287 (741)
T 1yr2_A 209 VKF-SGLAWLGNDALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSS 287 (741)
T ss_dssp EES-CCCEESTTSEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred cee-ccEEEECCCEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEE
Confidence 110 1122222243333332221 1245688888876652 122222211111222223 5654444443
Q ss_pred CCCCccCceEEeeCCCC--e-eEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCC--CcEEEcCCCCCC
Q psy14726 500 NGHNCLNSCEVYDPECN--Q-WTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVT--KTWSQVPDMYNP 574 (712)
Q Consensus 500 ~~~~~~~~v~~yd~~~~--~-W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~--~~W~~~~~~p~~ 574 (712)
.+....+.++.+|..+. . |..+..-....... +...++.||+....+ .....++.+|..+ ..|..+-+-...
T Consensus 288 ~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~--~~~~~l~~~d~~~~~~~~~~l~~~~~~ 364 (741)
T 1yr2_A 288 EGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDG--APLKKIVRVDLSGSTPRFDTVVPESKD 364 (741)
T ss_dssp CTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTT--CTTCEEEEEECSSSSCEEEEEECCCSS
T ss_pred ccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCC--CCCCEEEEEeCCCCccccEEEecCCCC
Confidence 33223568999998877 6 88876433222222 234567788776432 2246799999987 579887432211
Q ss_pred ccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeEEEc
Q psy14726 575 RSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 575 r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
...++...++.+++....++ ...++++|+..+.-..+
T Consensus 365 -~l~~~~~~~~~lv~~~~~dg---~~~l~~~~~~g~~~~~l 401 (741)
T 1yr2_A 365 -NLESVGIAGNRLFASYIHDA---KSQVLAFDLDGKPAGAV 401 (741)
T ss_dssp -EEEEEEEEBTEEEEEEEETT---EEEEEEEETTSCEEEEC
T ss_pred -eEEEEEEECCEEEEEEEECC---EEEEEEEeCCCCceeec
Confidence 12233445888888876554 34688888765544444
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=95.22 E-value=0.57 Score=46.90 Aligned_cols=225 Identities=13% Similarity=0.024 Sum_probs=107.8
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCC-cceEEEEE-CC-EEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCC----cc
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPR-AYHGTAVI-GY-NIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFK----RC 435 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r-~~~~~~~~-~~-~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~----r~ 435 (712)
..+..+|..+++.... ...+... ..+.+++. ++ .+|+.++. ...++.+|+.+++-...-+.+.+ ..
T Consensus 11 ~~v~~~d~~~~~~~~~--~~~~~~~~~~~~~~~s~dg~~l~v~~~~-----~~~v~~~d~~~~~~~~~~~~~~~~~~~~~ 83 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKV--ITIADAGPTPMVPMVAPGGRIAYATVNK-----SESLVKIDLVTGETLGRIDLSTPEERVKS 83 (337)
T ss_dssp TEEEEEETTTTEEEEE--EECTTCTTCCCCEEECTTSSEEEEEETT-----TTEEEEEETTTCCEEEEEECCBTTEEEEC
T ss_pred CeEEEEECCCCcEEEE--EEcCCCCCCccceEEcCCCCEEEEEeCC-----CCeEEEEECCCCCeEeeEEcCCccccccc
Confidence 4688899988765432 1111110 12234443 44 67776642 24699999988875432222110 01
Q ss_pred eeEEEE-ECC-eEEEEcccC---CCC---CCceeEEeecCCCceEEcccCCccccceeEEEE-CCE-EEEEcccCCCCcc
Q psy14726 436 YVSTAV-HHD-VIYAMGGYN---GQR---RQNSVEKYNYTENQWSLIAPMNVERSDASATTL-QGK-IYITGGFNGHNCL 505 (712)
Q Consensus 436 ~~~~~~-~~~-~iyv~GG~~---~~~---~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-iyv~GG~~~~~~~ 505 (712)
-+.++. -++ .+|+..+.. ... ....+.+||+.+.+....-+. +..-..++.- +++ +|+.+
T Consensus 84 ~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~-------- 153 (337)
T 1pby_B 84 LFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA--PRQITMLAWARDGSKLYGLG-------- 153 (337)
T ss_dssp TTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC--CSSCCCEEECTTSSCEEEES--------
T ss_pred ccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC--CCCcceeEECCCCCEEEEeC--------
Confidence 122333 244 677664210 011 236799999988765433222 2222233322 444 77662
Q ss_pred CceEEeeCCCCeeEEeCCCCC-CCcceEEEEECCEEEEEcCCCCC------------------CccceEEEEeCCCCcEE
Q psy14726 506 NSCEVYDPECNQWTLIEPMRH-RRSGVSCIAYHECIYVIGGFNGM------------------SRMCNGEKYNPVTKTWS 566 (712)
Q Consensus 506 ~~v~~yd~~~~~W~~~~~~p~-~r~~~~~~~~~~~iyv~GG~~~~------------------~~~~~v~~yd~~~~~W~ 566 (712)
..+..||..+++-...-+... .+. .....-+..+|+.+...+. .....+..||+.+.+-.
T Consensus 154 ~~i~~~d~~~~~~~~~~~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 232 (337)
T 1pby_B 154 RDLHVMDPEAGTLVEDKPIQSWEAE-TYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA 232 (337)
T ss_dssp SSEEEEETTTTEEEEEECSTTTTTT-TBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE
T ss_pred CeEEEEECCCCcEeeeeeccccCCC-ceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce
Confidence 468999998887543322111 111 0111112223333221100 00126889999887654
Q ss_pred EcCCCCCCccceEEEEE-CC-EEEEEcccCCCceeeeEEEEECCCCeEE
Q psy14726 567 QVPDMYNPRSNFAIEVI-DD-MIFAIGGFNGVTTIYHVECYDEKTDEWY 613 (712)
Q Consensus 567 ~~~~~p~~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 613 (712)
.+...+......+++.. ++ .+|+. ...+.+||+.+.+-.
T Consensus 233 ~~~~~~~~~~~~~~~~s~dg~~l~~~--------~~~v~~~d~~~~~~~ 273 (337)
T 1pby_B 233 MREVRIMDVFYFSTAVNPAKTRAFGA--------YNVLESFDLEKNASI 273 (337)
T ss_dssp EEEEEECSSCEEEEEECTTSSEEEEE--------ESEEEEEETTTTEEE
T ss_pred EeecCCCCCceeeEEECCCCCEEEEe--------CCeEEEEECCCCcCc
Confidence 33211122222233333 34 45544 147899999887654
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=95.19 E-value=1.5 Score=44.25 Aligned_cols=222 Identities=8% Similarity=-0.080 Sum_probs=114.1
Q ss_pred CceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEE
Q psy14726 362 TDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTA 440 (712)
Q Consensus 362 ~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~ 440 (712)
...++.+|..+++-..+ ......+.. +++.+++....++.....++.+|..+++...+...+. ....+
T Consensus 42 ~~~l~~~d~~~~~~~~l--------~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~---~~~~~ 110 (347)
T 2gop_A 42 ENTIVIENLKNNARRFI--------ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN---IRSLE 110 (347)
T ss_dssp EEEEEEEETTTCCEEEE--------ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE---EEEEE
T ss_pred cceEEEEeCCCCceEEc--------ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC---cccee
Confidence 34688888887765553 111222232 4444444433222224569999999988777655432 22222
Q ss_pred E-ECCeEEEEcccC------------------CC----CCCceeEEeecCCCce-EEcccCCccccceeEEEE-CCEEEE
Q psy14726 441 V-HHDVIYAMGGYN------------------GQ----RRQNSVEKYNYTENQW-SLIAPMNVERSDASATTL-QGKIYI 495 (712)
Q Consensus 441 ~-~~~~iyv~GG~~------------------~~----~~~~~v~~yd~~~~~W-~~~~~~p~~r~~~~~~~~-~~~iyv 495 (712)
. -+|+.++++... +. .....++++|+.+++. ..+.. + .....+.. ++ +++
T Consensus 111 wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~---~~~~~~~spdg-~~~ 185 (347)
T 2gop_A 111 WNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P---RFSSGIWHRDK-IVV 185 (347)
T ss_dssp ECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E---TTCEEEEETTE-EEE
T ss_pred ECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C---CcccccCCCCe-EEE
Confidence 2 256544444321 00 1135799999998887 66654 3 22223333 55 555
Q ss_pred EcccCCCC---c-cCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCE-EEEEcCCC--CCCccceEEEEeCCCCcEEEc
Q psy14726 496 TGGFNGHN---C-LNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHEC-IYVIGGFN--GMSRMCNGEKYNPVTKTWSQV 568 (712)
Q Consensus 496 ~GG~~~~~---~-~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~-iyv~GG~~--~~~~~~~v~~yd~~~~~W~~~ 568 (712)
.+..+... . ...++.+| +++++.+..- .......-+|+ |++.+... +......++.+| +.++..+
T Consensus 186 ~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~----~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l 257 (347)
T 2gop_A 186 NVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK----VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGI 257 (347)
T ss_dssp EEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE----ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEES
T ss_pred EEecccccccccccccEEEeC--CCceEEeccC----cceeeECCCCCEEEEEEccccCCccccceEEEEC--CCceEec
Confidence 55443221 2 45788888 7777766532 22222244655 44444221 112346799999 6777776
Q ss_pred CCCCCCccceE-EEEECCEEEEEcccCCCceeeeEEEEECCCCeEEEc
Q psy14726 569 PDMYNPRSNFA-IEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 569 ~~~p~~r~~~~-~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
..-.. ..... .+..++ +|+.+..++ ...+| ++ +++...+
T Consensus 258 ~~~~~-~~~~~~~~~sdg-~~~~~~~~~---~~~l~-~~--~g~~~~~ 297 (347)
T 2gop_A 258 LDEVD-RGVGQAKIKDGK-VYFTLFEEG---SVNLY-IW--DGEIKPI 297 (347)
T ss_dssp STTCC-SEEEEEEEETTE-EEEEEEETT---EEEEE-EE--SSSEEEE
T ss_pred cccCC-cccCCccEEcCc-EEEEEecCC---cEEEE-Ec--CCceEEE
Confidence 43221 11121 222244 777766554 23567 77 3444433
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=95.17 E-value=1.1 Score=46.08 Aligned_cols=195 Identities=10% Similarity=-0.085 Sum_probs=99.4
Q ss_pred ceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEECC
Q psy14726 412 NSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQG 491 (712)
Q Consensus 412 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~ 491 (712)
..++.+|..+++...+..-...........-+|+.+++.+.. ..++++|+.+.+-..+...+.. ..-++
T Consensus 60 ~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~-----~~l~~~d~~~~~~~~~~~~~~~------~~~~g 128 (396)
T 3c5m_A 60 RNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNE-----LNLMKVDLETLEEQVIYTVDEE------WKGYG 128 (396)
T ss_dssp CEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETT-----TEEEEEETTTCCEEEEEECCTT------EEEEE
T ss_pred ceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcC-----CcEEEEECCCCCcEEEEecccc------cCCCC
Confidence 468999999988777654332111112223455544444322 2689999888776555443322 11122
Q ss_pred EEEEEccc-------------C--CC----------CccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CCE-EEEEc
Q psy14726 492 KIYITGGF-------------N--GH----------NCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HEC-IYVIG 544 (712)
Q Consensus 492 ~iyv~GG~-------------~--~~----------~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-iyv~G 544 (712)
+.+++... . +. .....++.+|..+++...+...+. ...+....- ++. |++..
T Consensus 129 ~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~-~~~~~~~sp~dg~~l~~~~ 207 (396)
T 3c5m_A 129 TWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTA-WLGHPIYRPFDDSTVGFCH 207 (396)
T ss_dssp EEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESS-CEEEEEEETTEEEEEEEEE
T ss_pred CEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCc-ccccceECCCCCCEEEEEe
Confidence 22222110 0 00 123578899999888776653211 122222222 344 54443
Q ss_pred CCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCeEEEccCCC
Q psy14726 545 GFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMN 619 (712)
Q Consensus 545 G~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p 619 (712)
..........++.+|..+..+..+.. ..+........+ +++.+++++.........++++|+.+++...+...+
T Consensus 208 ~~~~~~~~~~l~~~d~~~~~~~~l~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~ 283 (396)
T 3c5m_A 208 EGPHDLVDARMWLVNEDGSNVRKIKE-HAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP 283 (396)
T ss_dssp CSCSSSCSCCCEEEETTSCCCEESSC-CCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC
T ss_pred cCCCCCCCceEEEEECCCCceeEeec-cCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC
Confidence 21111112579999998888777754 221212222233 555333333222222235999999998877765544
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=95.16 E-value=2.5 Score=40.92 Aligned_cols=195 Identities=12% Similarity=0.003 Sum_probs=109.9
Q ss_pred eEEEEE--CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEE--CCeEEEEcccCCCCCCceeEEee
Q psy14726 390 HGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH--HDVIYAMGGYNGQRRQNSVEKYN 465 (712)
Q Consensus 390 ~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd 465 (712)
+++++. ++.||+.-.. ...++++|+....-..+..... ..-+++++- ++.||+.-.. .+.+.++|
T Consensus 39 ~gi~~d~~~~~ly~~d~~-----~~~I~~~~~~g~~~~~~~~~~~-~~p~~ia~d~~~~~lyv~d~~-----~~~I~~~~ 107 (267)
T 1npe_A 39 IGLAFDCVDKVVYWTDIS-----EPSIGRASLHGGEPTTIIRQDL-GSPEGIALDHLGRTIFWTDSQ-----LDRIEVAK 107 (267)
T ss_dssp EEEEEETTTTEEEEEETT-----TTEEEEEESSSCCCEEEECTTC-CCEEEEEEETTTTEEEEEETT-----TTEEEEEE
T ss_pred EEEEEecCCCEEEEEECC-----CCEEEEEecCCCCcEEEEECCC-CCccEEEEEecCCeEEEEECC-----CCEEEEEE
Confidence 455655 5789987542 3579999998765433322111 123445553 5799997532 35789999
Q ss_pred cCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--CCEEE
Q psy14726 466 YTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIY 541 (712)
Q Consensus 466 ~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iy 541 (712)
+....-..+.+....+ -..+++- +++||+..... ....++++++....-+.+..... ..-.+++.- ++.||
T Consensus 108 ~~g~~~~~~~~~~~~~-P~~i~vd~~~g~lyv~~~~~---~~~~I~~~~~dg~~~~~~~~~~~-~~P~gia~d~~~~~ly 182 (267)
T 1npe_A 108 MDGTQRRVLFDTGLVN-PRGIVTDPVRGNLYWTDWNR---DNPKIETSHMDGTNRRILAQDNL-GLPNGLTFDAFSSQLC 182 (267)
T ss_dssp TTSCSCEEEECSSCSS-EEEEEEETTTTEEEEEECCS---SSCEEEEEETTSCCCEEEECTTC-SCEEEEEEETTTTEEE
T ss_pred cCCCCEEEEEECCCCC-ccEEEEeeCCCEEEEEECCC---CCcEEEEEecCCCCcEEEEECCC-CCCcEEEEcCCCCEEE
Confidence 8765433332211111 1233333 68999986321 12568888876544333322111 122233333 57899
Q ss_pred EEcCCCCCCccceEEEEeCCCCcEEEc-CCCCCCccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeEE
Q psy14726 542 VIGGFNGMSRMCNGEKYNPVTKTWSQV-PDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWY 613 (712)
Q Consensus 542 v~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 613 (712)
+.-.. .+.+.++|+....-..+ .....| .+++.-++.+|+....+ +.+.++|+.+++-.
T Consensus 183 v~d~~-----~~~I~~~~~~g~~~~~~~~~~~~P---~gi~~d~~~lyva~~~~-----~~v~~~d~~~g~~~ 242 (267)
T 1npe_A 183 WVDAG-----THRAECLNPAQPGRRKVLEGLQYP---FAVTSYGKNLYYTDWKT-----NSVIAMDLAISKEM 242 (267)
T ss_dssp EEETT-----TTEEEEEETTEEEEEEEEECCCSE---EEEEEETTEEEEEETTT-----TEEEEEETTTTEEE
T ss_pred EEECC-----CCEEEEEecCCCceEEEecCCCCc---eEEEEeCCEEEEEECCC-----CeEEEEeCCCCCce
Confidence 98643 36899999875432222 222222 45566689999974332 36899999987654
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.16 E-value=0.45 Score=49.20 Aligned_cols=216 Identities=7% Similarity=0.013 Sum_probs=102.6
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEE----CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcce-e
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI----GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCY-V 437 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~----~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~-~ 437 (712)
..+..+|..+.+-..... .+ ....++... ++.+++.|+.+ ..+..||..+.+-... +...... .
T Consensus 122 ~~i~iwd~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~~d~~~~~~~~~--~~~~~~~v~ 190 (408)
T 4a11_B 122 KTLKVWDTNTLQTADVFN--FE--ETVYSHHMSPVSTKHCLVAVGTRG-----PKVQLCDLKSGSCSHI--LQGHRQEIL 190 (408)
T ss_dssp SEEEEEETTTTEEEEEEE--CS--SCEEEEEECSSCSSCCEEEEEESS-----SSEEEEESSSSCCCEE--ECCCCSCEE
T ss_pred CeEEEeeCCCCccceecc--CC--CceeeeEeecCCCCCcEEEEEcCC-----CeEEEEeCCCcceeee--ecCCCCcEE
Confidence 468888988876554211 11 111222222 33467777643 3588999887653221 1111111 2
Q ss_pred EEEEE-CCe-EEEEcccCCCCCCceeEEeecCCCc--eEEccc------------CCccccceeEEEE--CCEEEEEccc
Q psy14726 438 STAVH-HDV-IYAMGGYNGQRRQNSVEKYNYTENQ--WSLIAP------------MNVERSDASATTL--QGKIYITGGF 499 (712)
Q Consensus 438 ~~~~~-~~~-iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~------------~p~~r~~~~~~~~--~~~iyv~GG~ 499 (712)
+++.. ++. +++.|+.+ ..+..||..+.. ...+.. ..........+.+ +++.++.|+.
T Consensus 191 ~~~~~~~~~~ll~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 265 (408)
T 4a11_B 191 AVSWSPRYDYILATASAD-----SRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGT 265 (408)
T ss_dssp EEEECSSCTTEEEEEETT-----SCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEECCCCCcEEEEEcCC-----CcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecC
Confidence 23332 333 77777754 357788876543 111100 0111111222233 6667777776
Q ss_pred CCCCccCceEEeeCCCCeeEEeCC-----CCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCC
Q psy14726 500 NGHNCLNSCEVYDPECNQWTLIEP-----MRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNP 574 (712)
Q Consensus 500 ~~~~~~~~v~~yd~~~~~W~~~~~-----~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~ 574 (712)
++ .+..||..+.+-..... ..............+..+++++.+ ..+..||..+.+-...-.....
T Consensus 266 dg-----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~i~v~d~~~~~~~~~~~~~~~ 335 (408)
T 4a11_B 266 DN-----RMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYG-----STIAVYTVYSGEQITMLKGHYK 335 (408)
T ss_dssp TS-----CEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEET-----TEEEEEETTTCCEEEEECCCSS
T ss_pred CC-----eEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecC-----CEEEEEECcCCcceeeeccCCC
Confidence 53 58888887765322110 001111111111122333333322 4788899877653332111111
Q ss_pred ccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCC
Q psy14726 575 RSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTD 610 (712)
Q Consensus 575 r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~ 610 (712)
. -.+++.. ++.+++.||.++ .+.+||+.+.
T Consensus 336 ~-v~~~~~s~~~~~l~s~~~dg-----~i~iw~~~~~ 366 (408)
T 4a11_B 336 T-VDCCVFQSNFQELYSGSRDC-----NILAWVPSLY 366 (408)
T ss_dssp C-EEEEEEETTTTEEEEEETTS-----CEEEEEECC-
T ss_pred e-EEEEEEcCCCCEEEEECCCC-----eEEEEeCCCC
Confidence 1 1223333 677888888766 5677777664
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=95.16 E-value=0.81 Score=44.47 Aligned_cols=189 Identities=7% Similarity=-0.092 Sum_probs=103.2
Q ss_pred ccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCC-CceEEcccCCc-cccceeEE
Q psy14726 410 YYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTE-NQWSLIAPMNV-ERSDASAT 487 (712)
Q Consensus 410 ~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~-~~W~~~~~~p~-~r~~~~~~ 487 (712)
....++.+|+.+++...+...+. ........-+++.+++++. ..+++||+.+ .+...+...+. ......+.
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 92 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTPE-LFEAPNWSPDGKYLLLNSE------GLLYRLSLAGDPSPEKVDTGFATICNNDHGI 92 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEESS-CCEEEEECTTSSEEEEEET------TEEEEEESSSCCSCEECCCTTCCCBCSCCEE
T ss_pred cceeEEEEeCCCCceeeeccCCc-ceEeeEECCCCCEEEEEcC------CeEEEEeCCCCCCceEeccccccccccceEE
Confidence 34679999999988775543221 1112222336676666542 4799999998 77766644332 12222222
Q ss_pred EECCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CC-EEEEEcCCCCCCccceEEEEeCCCCcE
Q psy14726 488 TLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HE-CIYVIGGFNGMSRMCNGEKYNPVTKTW 565 (712)
Q Consensus 488 ~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W 565 (712)
.-+++.+++++... .....++.+|..+.....+..... ...+... ++ .|++.++.++ ...++.+|..+...
T Consensus 93 spdg~~l~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~spdg~~l~~~~~~~~---~~~l~~~~~~~~~~ 165 (297)
T 2ojh_A 93 SPDGALYAISDKVE-FGKSAIYLLPSTGGTPRLMTKNLP---SYWHGWSPDGKSFTYCGIRDQ---VFDIYSMDIDSGVE 165 (297)
T ss_dssp CTTSSEEEEEECTT-TSSCEEEEEETTCCCCEECCSSSS---EEEEEECTTSSEEEEEEEETT---EEEEEEEETTTCCE
T ss_pred CCCCCEEEEEEeCC-CCcceEEEEECCCCceEEeecCCC---ccceEECCCCCEEEEEECCCC---ceEEEEEECCCCcc
Confidence 22666666655332 134678899988877665543221 2222222 44 4554554332 24678888888777
Q ss_pred EEcCCCCCCccceEEEEE-CCE-EEEEcccCCCceeeeEEEEECCCCeEEEccC
Q psy14726 566 SQVPDMYNPRSNFAIEVI-DDM-IFAIGGFNGVTTIYHVECYDEKTDEWYEATD 617 (712)
Q Consensus 566 ~~~~~~p~~r~~~~~~~~-~~~-i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 617 (712)
..+...+.. ...++.. +++ |++.++.++ ...+|.+++.+.....+..
T Consensus 166 ~~~~~~~~~--~~~~~~s~dg~~l~~~~~~~~---~~~i~~~~~~~~~~~~~~~ 214 (297)
T 2ojh_A 166 TRLTHGEGR--NDGPDYSPDGRWIYFNSSRTG---QMQIWRVRVDGSSVERITD 214 (297)
T ss_dssp EECCCSSSC--EEEEEECTTSSEEEEEECTTS---SCEEEEEETTSSCEEECCC
T ss_pred eEcccCCCc--cccceECCCCCEEEEEecCCC---CccEEEECCCCCCcEEEec
Confidence 766543321 1222222 555 444443333 2368888888777766643
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=95.13 E-value=0.67 Score=47.73 Aligned_cols=215 Identities=9% Similarity=-0.083 Sum_probs=111.8
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA 475 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 475 (712)
+++.++++...++ ...++.+|+.+++...+...+..........-+|+..+++..+ ..++.+|+.+.+-..+.
T Consensus 46 Dg~~l~~~~~~~g--~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~-----~~l~~~d~~~g~~~~~~ 118 (388)
T 3pe7_A 46 DGSKLLFGGAFDG--PWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG-----RNLMRVDLATLEENVVY 118 (388)
T ss_dssp TSCEEEEEECTTS--SCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT-----TEEEEEETTTCCEEEEE
T ss_pred CCCEEEEEEcCCC--CceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC-----CeEEEEECCCCcceeee
Confidence 4554445443221 2468999999998887765443322122334456544444321 47999999998876665
Q ss_pred cCCccccceeEEEE--CCEEEEEcccC-----------------CCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE
Q psy14726 476 PMNVERSDASATTL--QGKIYITGGFN-----------------GHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY 536 (712)
Q Consensus 476 ~~p~~r~~~~~~~~--~~~iyv~GG~~-----------------~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 536 (712)
..+........... +++.++.--.. .......++.+|..+++-+.+..-+. ...+....-
T Consensus 119 ~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~-~~~~~~~sp 197 (388)
T 3pe7_A 119 QVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQ-WLGHPIYRP 197 (388)
T ss_dssp ECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESS-CEEEEEEET
T ss_pred echhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCc-cccccEECC
Confidence 55543322222222 44433311000 01123678999999887666643221 223333333
Q ss_pred -CCEEEEEcCCCC-CCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE-CCE-EEEEcccCCCceeeeEEEEECCCCeE
Q psy14726 537 -HECIYVIGGFNG-MSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DDM-IFAIGGFNGVTTIYHVECYDEKTDEW 612 (712)
Q Consensus 537 -~~~iyv~GG~~~-~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-i~v~GG~~~~~~~~~v~~yd~~~~~W 612 (712)
+++.+++..... ......++.+|........+............+.. +++ |+.++...+ .....++++|+.+++-
T Consensus 198 ~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~-~~~~~l~~~d~~~g~~ 276 (388)
T 3pe7_A 198 YDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKG-SPDRFIYSADPETLEN 276 (388)
T ss_dssp TEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETT-CCCEEEEEECTTTCCE
T ss_pred CCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCC-CCcceEEEEecCCCce
Confidence 455333332211 12246899999988777766543221111122222 555 544433222 1112599999999887
Q ss_pred EEccCCC
Q psy14726 613 YEATDMN 619 (712)
Q Consensus 613 ~~~~~~p 619 (712)
..+...+
T Consensus 277 ~~l~~~~ 283 (388)
T 3pe7_A 277 RQLTSMP 283 (388)
T ss_dssp EEEEEEC
T ss_pred EEEEcCC
Confidence 6664443
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=95.09 E-value=1.9 Score=45.09 Aligned_cols=219 Identities=11% Similarity=0.153 Sum_probs=107.9
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCc-ceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEE
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRA-YHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTA 440 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~-~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~ 440 (712)
+.|..+|..+++...+-. ...... -.+++.. ++..++.|+.++ .+..||..+++-.....- ......+.
T Consensus 125 ~tV~lWd~~tg~~~~~~~--~~~~~~~V~sv~fspdg~~lasgs~Dg-----~v~iWd~~~~~~~~~~~~--h~~~v~~~ 195 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQ--MEQPGEYISSVAWIKEGNYLAVGTSSA-----EVQLWDVQQQKRLRNMTS--HSARVGSL 195 (420)
T ss_dssp TEEEEEETTTCCEEEEEE--CCSTTCCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEEEEECC--CSSCEEEE
T ss_pred CEEEEEECCCCCEEEEEE--ecCCCCcEEEEEECCCCCEEEEEECCC-----eEEEEEcCCCcEEEEEeC--CCCceEEE
Confidence 478999999987665321 111111 1233333 677778888543 588999988764332222 22223445
Q ss_pred EECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCe-
Q psy14726 441 VHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQ- 517 (712)
Q Consensus 441 ~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~- 517 (712)
..++.+.+.|+.+ ..+..+|..+...... .+............ ++..++.||.++ .+.++|..+++
T Consensus 196 s~~~~~l~sgs~d-----~~i~~~d~~~~~~~~~-~~~~h~~~~~~~~~~~~g~~l~s~~~D~-----~v~i~~~~~~~~ 264 (420)
T 4gga_A 196 SWNSYILSSGSRS-----GHIHHHDVRVAEHHVA-TLSGHSQEVCGLRWAPDGRHLASGGNDN-----LVNVWPSAPGEG 264 (420)
T ss_dssp EEETTEEEEEETT-----SEEEEEETTSSSCEEE-EEECCSSCEEEEEECTTSSEEEEEETTS-----CEEEEESSCCSS
T ss_pred eeCCCEEEEEeCC-----CceeEeeecccceeeE-EecccccceeeeeecCCCCeeeeeeccc-----cceEEeeccccc
Confidence 5677888887754 4567777665443211 11111111112222 566666776553 45666665443
Q ss_pred -eEEeCCCCCCCcceEEEEE---CCEEEE-EcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE--CCEEEEE
Q psy14726 518 -WTLIEPMRHRRSGVSCIAY---HECIYV-IGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAI 590 (712)
Q Consensus 518 -W~~~~~~p~~r~~~~~~~~---~~~iyv-~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~ 590 (712)
+..+...........+... +..+++ .||.. -..|..||..+.+-...-... ....+++.. ++.+++.
T Consensus 265 ~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~----D~~I~iwd~~t~~~~~~~~~~--~~v~~~~~~~~~~~lv~~ 338 (420)
T 4gga_A 265 GWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTS----DRHIRIWNVCSGACLSAVDAH--SQVCSILWSPHYKELISG 338 (420)
T ss_dssp CSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTT----TCEEEEEETTTTEEEEEEECS--SCEEEEEEETTTTEEEEE
T ss_pred cceeeeeecccCCceeeeeeCCCcccEEEEEeecC----CCEEEEEeCCccccceeeccc--cceeeeeecCCCCeEEEE
Confidence 1111111111111112222 334444 44532 146888998877544332211 111222222 4556655
Q ss_pred cccCCCceeeeEEEEECCCCe
Q psy14726 591 GGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 591 GG~~~~~~~~~v~~yd~~~~~ 611 (712)
+|... ..+.+||..+.+
T Consensus 339 sg~~d----~~I~iwd~~~~~ 355 (420)
T 4gga_A 339 HGFAQ----NQLVIWKYPTMA 355 (420)
T ss_dssp ECTTT----CCEEEEETTTCC
T ss_pred EecCC----CEEEEEECCCCc
Confidence 55433 257888877653
|
| >3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=95.07 E-value=1.7 Score=45.18 Aligned_cols=187 Identities=10% Similarity=0.104 Sum_probs=105.8
Q ss_pred eEEEEECCC--CcEEEeCCCCCCcceeEEEEE---CCeEEEEcccCCCCCCceeEEeecCCCceEEcccC---Ccc--c-
Q psy14726 413 SCRCFNAVT--KVWKEIAPMNFKRCYVSTAVH---HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPM---NVE--R- 481 (712)
Q Consensus 413 ~v~~yd~~~--~~W~~~~~~~~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~---p~~--r- 481 (712)
.+++++... .+|....+......-++++.- ++.||+.+.... .-..+++.+-...+|+.+... +.. +
T Consensus 32 Gl~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~--~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~ 109 (394)
T 3b7f_A 32 GAWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGH--LGPTVFRSDDGGGNWTEATRPPAFNKAPEGE 109 (394)
T ss_dssp EEEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC----CCEEEEEESSTTSCCEECSBCCCCCCCC---
T ss_pred ceEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCC--CCccEEEeCCCCCCceECCccccCCCccccc
Confidence 377777655 789876432222333445443 468888654211 112578887788899988532 211 1
Q ss_pred ----cce--eEEEE----CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCC---CC--------------CCcceEEE
Q psy14726 482 ----SDA--SATTL----QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPM---RH--------------RRSGVSCI 534 (712)
Q Consensus 482 ----~~~--~~~~~----~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~---p~--------------~r~~~~~~ 534 (712)
... +++.- .+.||+.+. ...+++.+-...+|+.+... |. ....++++
T Consensus 110 ~~~~~~~i~~l~~~~~~~~~~l~~g~~------~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~ 183 (394)
T 3b7f_A 110 TGRVVDHVFWLTPGHASEPGTWYAGTS------PQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSIL 183 (394)
T ss_dssp -CCCCCEEEEEEECCTTSTTCEEEEEE------TTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEE
T ss_pred ccccccceeEEEeCCCCCCCEEEEEec------CCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEE
Confidence 011 12222 467887542 13488888788899988532 21 11223343
Q ss_pred EE---CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCC------CCC-----ccceEEEEEC---CEEEEEcccCCCc
Q psy14726 535 AY---HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDM------YNP-----RSNFAIEVID---DMIFAIGGFNGVT 597 (712)
Q Consensus 535 ~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~------p~~-----r~~~~~~~~~---~~i~v~GG~~~~~ 597 (712)
.. .+.||+.++. ..+++.+-...+|+.+... |.+ ...+.++... +.||+.. .
T Consensus 184 ~d~~~~~~l~vg~~~------ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~-~---- 252 (394)
T 3b7f_A 184 VDPRDPKHLYIGMSS------GGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQN-H---- 252 (394)
T ss_dssp ECTTCTTCEEEEEET------BEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEE-T----
T ss_pred ECCCCCCEEEEEECC------CCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEc-C----
Confidence 33 2568876432 3578888778899988531 211 2234444432 5676642 1
Q ss_pred eeeeEEEEECCCCeEEEccC-CCC
Q psy14726 598 TIYHVECYDEKTDEWYEATD-MNI 620 (712)
Q Consensus 598 ~~~~v~~yd~~~~~W~~~~~-~p~ 620 (712)
..+++.+-...+|+.+.. +|.
T Consensus 253 --~gl~~s~D~G~tW~~~~~~l~~ 274 (394)
T 3b7f_A 253 --CGIYRMDRREGVWKRIGDAMPR 274 (394)
T ss_dssp --TEEEEEETTTTEEECGGGGSCT
T ss_pred --CeEEEeCCCCCcceECCCCCCC
Confidence 247888888999999854 554
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.00 E-value=1.7 Score=43.70 Aligned_cols=226 Identities=8% Similarity=0.098 Sum_probs=111.2
Q ss_pred eEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-C---CEEEEEeecCCCCccceEEEEECCCCc-
Q psy14726 349 ILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-G---YNIYVIGGFDGNEYYNSCRCFNAVTKV- 423 (712)
Q Consensus 349 ~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~---~~lyv~GG~~~~~~~~~v~~yd~~~~~- 423 (712)
.+++.|+... ....+..||..+++....... .....-.+++.. + +.+++.|+.+ ..+..||..+.+
T Consensus 32 ~l~~~~s~~~--~d~~v~iw~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~ 102 (357)
T 3i2n_A 32 KFVTMGNFAR--GTGVIQLYEIQHGDLKLLREI--EKAKPIKCGTFGATSLQQRYLATGDFG-----GNLHIWNLEAPEM 102 (357)
T ss_dssp EEEEEEC--C--CCEEEEEEEECSSSEEEEEEE--EESSCEEEEECTTCCTTTCCEEEEETT-----SCEEEECTTSCSS
T ss_pred eEEEecCccC--CCcEEEEEeCCCCcccceeee--cccCcEEEEEEcCCCCCCceEEEecCC-----CeEEEEeCCCCCc
Confidence 4566665311 124678888888776542111 111111222222 2 4777777754 358888888765
Q ss_pred -EEEeCCCCCCcceeEEE-------EECCeEEEEcccCCCCCCceeEEeecCCCc--eEEcccCCc--cccceeEE----
Q psy14726 424 -WKEIAPMNFKRCYVSTA-------VHHDVIYAMGGYNGQRRQNSVEKYNYTENQ--WSLIAPMNV--ERSDASAT---- 487 (712)
Q Consensus 424 -W~~~~~~~~~r~~~~~~-------~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~--~r~~~~~~---- 487 (712)
...+..-..+ -.++. ..++..++.|+.+ ..+..||+.+.. ...+..... .+.-.+++
T Consensus 103 ~~~~~~~~~~~--v~~~~~~~~~~~s~~~~~l~~~~~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 175 (357)
T 3i2n_A 103 PVYSVKGHKEI--INAIDGIGGLGIGEGAPEIVTGSRD-----GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNA 175 (357)
T ss_dssp CSEEECCCSSC--EEEEEEESGGGCC-CCCEEEEEETT-----SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECC
T ss_pred cEEEEEecccc--eEEEeeccccccCCCccEEEEEeCC-----CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEec
Confidence 2222211111 11121 1356677777754 458888888764 333322111 11112222
Q ss_pred -EECCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE----CCEEEEEcCCCCCCccceEEEEeCCC
Q psy14726 488 -TLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY----HECIYVIGGFNGMSRMCNGEKYNPVT 562 (712)
Q Consensus 488 -~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~v~~yd~~~ 562 (712)
.-++.+++.|+.+ ..+..||..+.+-........ .-.++... ++..++.|+.+ ..+..||..+
T Consensus 176 ~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~ 243 (357)
T 3i2n_A 176 YNQEERVVCAGYDN-----GDIKLFDLRNMALRWETNIKN--GVCSLEFDRKDISMNKLVATSLE-----GKFHVFDMRT 243 (357)
T ss_dssp CC-CCCEEEEEETT-----SEEEEEETTTTEEEEEEECSS--CEEEEEESCSSSSCCEEEEEEST-----TEEEEEEEEE
T ss_pred cCCCCCEEEEEccC-----CeEEEEECccCceeeecCCCC--ceEEEEcCCCCCCCCEEEEECCC-----CeEEEEeCcC
Confidence 1367777777755 368899998877433322221 22233333 45666777654 4577777654
Q ss_pred CcEEEcCCC------CCCccceEEEEE-CCE-EEEEcccCCCceeeeEEEEECCC
Q psy14726 563 KTWSQVPDM------YNPRSNFAIEVI-DDM-IFAIGGFNGVTTIYHVECYDEKT 609 (712)
Q Consensus 563 ~~W~~~~~~------p~~r~~~~~~~~-~~~-i~v~GG~~~~~~~~~v~~yd~~~ 609 (712)
.+ .+..+ .....-.+++.. ++. +++.||.++ .+.+||..+
T Consensus 244 ~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~ 291 (357)
T 3i2n_A 244 QH--PTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAG-----GLHLWKYEY 291 (357)
T ss_dssp EE--TTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTS-----EEEEEEEEC
T ss_pred CC--cccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCC-----cEEEeecCC
Confidence 21 11111 111122233333 455 778888765 466666554
|
| >1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1 | Back alignment and structure |
|---|
Probab=94.99 E-value=1.7 Score=40.65 Aligned_cols=143 Identities=15% Similarity=0.098 Sum_probs=82.1
Q ss_pred EEEEECCEEEEEeecCCCCccceEEEEECCCCcEEE--e----CCCCCCcceeEEEEE--CCeEEEEcccCCCCCCceeE
Q psy14726 391 GTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE--I----APMNFKRCYVSTAVH--HDVIYAMGGYNGQRRQNSVE 462 (712)
Q Consensus 391 ~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~--~----~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~ 462 (712)
+++..++.+|+|=| +.+|+++.....+.. + +.+|. ... ++... ++++|+|-| +.+|
T Consensus 28 Ai~~~~g~~y~Fkg-------~~~wr~~~~~~~~~p~~I~~~wp~Lp~-~iD-Aa~~~~~~~~iyfFkG-------~~~w 91 (207)
T 1pex_A 28 AITSLRGETMIFKD-------RFFWRLHPQQVDAELFLTKSFWPELPN-RID-AAYEHPSHDLIFIFRG-------RKFW 91 (207)
T ss_dssp EEEEETTEEEEEET-------TEEEEECSSSSCCEEEEHHHHCTTSCS-SCC-EEEEETTTTEEEEEET-------TEEE
T ss_pred EEEeCCCcEEEEEC-------CEEEEEeCCCcCCCceehhHhccCCCC-Ccc-EEEEeccCCcEEEEcc-------CEEE
Confidence 44556899999977 457888765544321 1 23442 122 22222 689999977 5678
Q ss_pred EeecCCCce---EEccc--CCccccceeEEEE---CCEEEEEcccCCCCccCceEEeeCCCCeeEE-----e----CCCC
Q psy14726 463 KYNYTENQW---SLIAP--MNVERSDASATTL---QGKIYITGGFNGHNCLNSCEVYDPECNQWTL-----I----EPMR 525 (712)
Q Consensus 463 ~yd~~~~~W---~~~~~--~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-----~----~~~p 525 (712)
+|+..+-.- ..+.. +|..-..--||.. ++++|+|-| +..++||..+++=.. + +.+|
T Consensus 92 ~~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG-------~~ywr~d~~~~~~d~gyPr~i~~~~~Gip 164 (207)
T 1pex_A 92 ALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSG-------NQVWRYDDTNHIMDKDYPRLIEEDFPGIG 164 (207)
T ss_dssp EESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEET-------TEEEEEETTTTEECSSCCCBHHHHSTTSC
T ss_pred EEeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeC-------CEEEEEeCcCccccCCCCccHHHcCCCCC
Confidence 886432211 12222 2221112233333 489999987 568999987654210 0 1222
Q ss_pred CCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcE
Q psy14726 526 HRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTW 565 (712)
Q Consensus 526 ~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 565 (712)
..--++...++.+|++-| +..++||..+.+=
T Consensus 165 --~~iDaAf~~~g~~YfFkg-------~~y~rf~~~~~~v 195 (207)
T 1pex_A 165 --DKVDAVYEKNGYIYFFNG-------PIQFEYSIWSNRI 195 (207)
T ss_dssp --SCCSEEEEETTEEEEEET-------TEEEEEETTTTEE
T ss_pred --CCccEEEEcCCcEEEEEC-------CEEEEEeCCccEE
Confidence 223344456999999987 5788999877643
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=94.98 E-value=2.1 Score=45.27 Aligned_cols=149 Identities=9% Similarity=-0.024 Sum_probs=75.7
Q ss_pred CCEEEEEeecCCCCccceEEEEECC--CCcEEE-eCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCce
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAV--TKVWKE-IAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQW 471 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~--~~~W~~-~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 471 (712)
+..|++.|+.+ ..+..||.. +++... +.....+..-.+++. -+++.+++|+.+ ..++.+|..+...
T Consensus 114 ~~~l~~~~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~-----g~v~~~~~~~~~~ 183 (450)
T 2vdu_B 114 ESRLIACADSD-----KSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKF-----GDVYSIDINSIPE 183 (450)
T ss_dssp SSEEEEEEGGG-----TEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTSCCC
T ss_pred CCEEEEEECCC-----CeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCC-----CcEEEEecCCccc
Confidence 33456777753 357888877 544322 211011111122332 256666777642 4578888766543
Q ss_pred EE--cccCCccccceeEE--EEC---CEEEEEcccCCCCccCceEEeeCCCCeeEEe-C-CCCCCCcceEEEEECCEEEE
Q psy14726 472 SL--IAPMNVERSDASAT--TLQ---GKIYITGGFNGHNCLNSCEVYDPECNQWTLI-E-PMRHRRSGVSCIAYHECIYV 542 (712)
Q Consensus 472 ~~--~~~~p~~r~~~~~~--~~~---~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~-~~p~~r~~~~~~~~~~~iyv 542 (712)
.. ...+........++ .-+ +++++.|+.+ ..+.+||..+.+.... . ... ......+.. ++.+++
T Consensus 184 ~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d-----~~i~vwd~~~~~~~~~~~~~h~-~~v~~~~~s-d~~~l~ 256 (450)
T 2vdu_B 184 EKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRD-----EHIKISHYPQCFIVDKWLFGHK-HFVSSICCG-KDYLLL 256 (450)
T ss_dssp SSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETT-----SCEEEEEESCTTCEEEECCCCS-SCEEEEEEC-STTEEE
T ss_pred ccccceeeecccCceEEEEEcCCCCCCcEEEEEcCC-----CcEEEEECCCCceeeeeecCCC-CceEEEEEC-CCCEEE
Confidence 21 11111111111222 226 7788888765 3578888776653322 1 111 111122222 677777
Q ss_pred EcCCCCCCccceEEEEeCCCCcEE
Q psy14726 543 IGGFNGMSRMCNGEKYNPVTKTWS 566 (712)
Q Consensus 543 ~GG~~~~~~~~~v~~yd~~~~~W~ 566 (712)
.|+.+ ..+..||..+.+..
T Consensus 257 s~~~d-----~~v~vwd~~~~~~~ 275 (450)
T 2vdu_B 257 SAGGD-----DKIFAWDWKTGKNL 275 (450)
T ss_dssp EEESS-----SEEEEEETTTCCEE
T ss_pred EEeCC-----CeEEEEECCCCcEe
Confidence 77754 57889998887643
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.96 E-value=1.7 Score=43.81 Aligned_cols=229 Identities=8% Similarity=0.054 Sum_probs=111.3
Q ss_pred eEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEe
Q psy14726 349 ILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEI 427 (712)
Q Consensus 349 ~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 427 (712)
..++.|+.+ ..+..||..+........... ....-.+++.. ++..++.|+.+ ..+..||..+++....
T Consensus 55 ~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~~~~ 123 (368)
T 3mmy_A 55 NFLIAGSWA-----NDVRCWEVQDSGQTIPKAQQM-HTGPVLDVCWSDDGSKVFTASCD-----KTAKMWDLSSNQAIQI 123 (368)
T ss_dssp EEEEEEETT-----SEEEEEEECTTSCEEEEEEEE-CSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEE
T ss_pred eEEEEECCC-----CcEEEEEcCCCCceeEEEecc-ccCCEEEEEECcCCCEEEEEcCC-----CcEEEEEcCCCCceee
Confidence 566666643 357788877522221000000 01112233333 56666777753 3688999998886654
Q ss_pred CCCCCCcceeEEEE---ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEECCEEEEEcccCCCCc
Q psy14726 428 APMNFKRCYVSTAV---HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNC 504 (712)
Q Consensus 428 ~~~~~~r~~~~~~~---~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~ 504 (712)
.....+ -.+++. .++.+++.|+.+ ..+..||..+.+-... +.......+.......+++.++ +
T Consensus 124 ~~~~~~--v~~~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~---- 189 (368)
T 3mmy_A 124 AQHDAP--VKTIHWIKAPNYSCVMTGSWD-----KTLKFWDTRSSNPMMV--LQLPERCYCADVIYPMAVVATA-E---- 189 (368)
T ss_dssp EECSSC--EEEEEEEECSSCEEEEEEETT-----SEEEEECSSCSSCSEE--EECSSCEEEEEEETTEEEEEEG-G----
T ss_pred ccccCc--eEEEEEEeCCCCCEEEEccCC-----CcEEEEECCCCcEEEE--EecCCCceEEEecCCeeEEEeC-C----
Confidence 332211 122332 356777777754 4688899877653221 1122222333344555554433 2
Q ss_pred cCceEEeeCCCCe--eEEeCCCCCCCcceEEEEECC----EEEEEcCCCCCCccceEEEEeCCCCcE-----EEcC--CC
Q psy14726 505 LNSCEVYDPECNQ--WTLIEPMRHRRSGVSCIAYHE----CIYVIGGFNGMSRMCNGEKYNPVTKTW-----SQVP--DM 571 (712)
Q Consensus 505 ~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~----~iyv~GG~~~~~~~~~v~~yd~~~~~W-----~~~~--~~ 571 (712)
..+..||..... +..+...............+. ..++.|+.+ ..+..||.....- .... ..
T Consensus 190 -~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-----g~i~i~~~~~~~~~~~~~~~~~~~~~ 263 (368)
T 3mmy_A 190 -RGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIE-----GRVAIHYINPPNPAKDNFTFKCHRSN 263 (368)
T ss_dssp -GCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETT-----SEEEEEESSCSCHHHHSEEEECSEEC
T ss_pred -CcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCC-----CcEEEEecCCCCccccceeeeeeecc
Confidence 356777776543 433332211111122222221 235666543 5677788765421 1110 00
Q ss_pred --CCCcc----ceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCeEE
Q psy14726 572 --YNPRS----NFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEWY 613 (712)
Q Consensus 572 --p~~r~----~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 613 (712)
..... ....+.+ ++.+++.||.++ .+.+||..+.+-.
T Consensus 264 ~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg-----~i~iwd~~~~~~~ 308 (368)
T 3mmy_A 264 GTNTSAPQDIYAVNGIAFHPVHGTLATVGSDG-----RFSFWDKDARTKL 308 (368)
T ss_dssp ----CCCEEECCEEEEEECTTTCCEEEEETTS-----CEEEEETTTTEEE
T ss_pred cccccccccccceEEEEEecCCCEEEEEccCC-----eEEEEECCCCcEE
Confidence 00000 1222233 677888888765 5889998876543
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=94.92 E-value=3.9 Score=42.62 Aligned_cols=225 Identities=12% Similarity=0.098 Sum_probs=106.8
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEECCEEEEEeecCCCCccceEEEEECCCCcEEEe
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEI 427 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 427 (712)
+..++.|+.+ ..|..+|..+++-... ... ......+...++.+++.|+.+ ..+..+|.........
T Consensus 159 g~~lasgs~D-----g~v~iWd~~~~~~~~~--~~~--h~~~v~~~s~~~~~l~sgs~d-----~~i~~~d~~~~~~~~~ 224 (420)
T 4gga_A 159 GNYLAVGTSS-----AEVQLWDVQQQKRLRN--MTS--HSARVGSLSWNSYILSSGSRS-----GHIHHHDVRVAEHHVA 224 (420)
T ss_dssp SSEEEEEETT-----SCEEEEETTTTEEEEE--ECC--CSSCEEEEEEETTEEEEEETT-----SEEEEEETTSSSCEEE
T ss_pred CCEEEEEECC-----CeEEEEEcCCCcEEEE--EeC--CCCceEEEeeCCCEEEEEeCC-----CceeEeeecccceeeE
Confidence 4455666642 3578889888765442 111 112223333466777777753 3567777665443211
Q ss_pred C-CCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCc--eEEcccCCccccceeEEEE---CCEEEEE-cccC
Q psy14726 428 A-PMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQ--WSLIAPMNVERSDASATTL---QGKIYIT-GGFN 500 (712)
Q Consensus 428 ~-~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~---~~~iyv~-GG~~ 500 (712)
. ..............++..++.||.+ +.+.++|..+.+ +..+...........+... +..+++. ||..
T Consensus 225 ~~~~h~~~~~~~~~~~~g~~l~s~~~D-----~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~ 299 (420)
T 4gga_A 225 TLSGHSQEVCGLRWAPDGRHLASGGND-----NLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTS 299 (420)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETT-----SCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTT
T ss_pred EecccccceeeeeecCCCCeeeeeecc-----ccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecC
Confidence 1 1111111112222355666666643 346667665543 1111111111111122222 3444444 4433
Q ss_pred CCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccce
Q psy14726 501 GHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNF 578 (712)
Q Consensus 501 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~ 578 (712)
+ ..+..||..+++-...-..... ..+++.. ++.+++.+|.. -..+.+||..+.+ .+..+......-
T Consensus 300 D----~~I~iwd~~t~~~~~~~~~~~~--v~~~~~~~~~~~lv~~sg~~----d~~I~iwd~~~~~--~v~~l~gH~~~V 367 (420)
T 4gga_A 300 D----RHIRIWNVCSGACLSAVDAHSQ--VCSILWSPHYKELISGHGFA----QNQLVIWKYPTMA--KVAELKGHTSRV 367 (420)
T ss_dssp T----CEEEEEETTTTEEEEEEECSSC--EEEEEEETTTTEEEEEECTT----TCCEEEEETTTCC--EEEEECCCSSCE
T ss_pred C----CEEEEEeCCccccceeeccccc--eeeeeecCCCCeEEEEEecC----CCEEEEEECCCCc--EEEEEcCCCCCE
Confidence 2 4688899888764433222221 1222222 45666665643 2468889987653 222222111111
Q ss_pred EEEEE--CCEEEEEcccCCCceeeeEEEEECC
Q psy14726 579 AIEVI--DDMIFAIGGFNGVTTIYHVECYDEK 608 (712)
Q Consensus 579 ~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~ 608 (712)
..+.+ ++..++.||.++ .|.+||..
T Consensus 368 ~~l~~spdg~~l~S~s~D~-----tvriWdv~ 394 (420)
T 4gga_A 368 LSLTMSPDGATVASAAADE-----TLRLWRCF 394 (420)
T ss_dssp EEEEECTTSSCEEEEETTT-----EEEEECCS
T ss_pred EEEEEcCCCCEEEEEecCC-----eEEEEECC
Confidence 22223 678888888776 46666654
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=94.81 E-value=3.8 Score=41.15 Aligned_cols=188 Identities=8% Similarity=-0.066 Sum_probs=99.3
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEE-EEECCeEEEEcccCCCCCCceeEEeecCCCceEEc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVST-AVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 474 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~-~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 474 (712)
++.+|+++.. ...+++||+.+++...+.. +. .-.++ ..-+|++++... ..+++||+.+.+.+.+
T Consensus 60 ~~~l~~~d~~-----~~~i~~~d~~~~~~~~~~~-~~--~v~~i~~~~dg~l~v~~~-------~gl~~~d~~~g~~~~~ 124 (326)
T 2ghs_A 60 SGTAWWFNIL-----ERELHELHLASGRKTVHAL-PF--MGSALAKISDSKQLIASD-------DGLFLRDTATGVLTLH 124 (326)
T ss_dssp TTEEEEEEGG-----GTEEEEEETTTTEEEEEEC-SS--CEEEEEEEETTEEEEEET-------TEEEEEETTTCCEEEE
T ss_pred CCEEEEEECC-----CCEEEEEECCCCcEEEEEC-CC--cceEEEEeCCCeEEEEEC-------CCEEEEECCCCcEEEE
Confidence 3678877643 2468999999887655432 21 22233 335788887542 3599999999988776
Q ss_pred ccCCccc--cceeEEEE--CCEEEEEcccC-CCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CC-EEEEEcCCC
Q psy14726 475 APMNVER--SDASATTL--QGKIYITGGFN-GHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HE-CIYVIGGFN 547 (712)
Q Consensus 475 ~~~p~~r--~~~~~~~~--~~~iyv~GG~~-~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~ 547 (712)
...+... .......+ +|++|+..... .......+++|| +++.+.+..- .. ...+.+.. ++ .+|+....
T Consensus 125 ~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~-~~-~~~~i~~s~dg~~lyv~~~~- 199 (326)
T 2ghs_A 125 AELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFAD-IS-IPNSICFSPDGTTGYFVDTK- 199 (326)
T ss_dssp ECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEE-ES-SEEEEEECTTSCEEEEEETT-
T ss_pred eeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCC-Cc-ccCCeEEcCCCCEEEEEECC-
Confidence 5443211 11222233 67888743211 112345789998 4666554210 01 11223332 34 58887532
Q ss_pred CCCccceEEEEeCC--CC-c------EEEcCCCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCeEEE
Q psy14726 548 GMSRMCNGEKYNPV--TK-T------WSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEWYE 614 (712)
Q Consensus 548 ~~~~~~~v~~yd~~--~~-~------W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 614 (712)
...+++||.. +. . +..+... ...-.+++.- ++.+|+....+ ..+.+||+....-..
T Consensus 200 ----~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~--~~~p~gi~~d~~G~lwva~~~~-----~~v~~~d~~g~~~~~ 265 (326)
T 2ghs_A 200 ----VNRLMRVPLDARTGLPTGKAEVFIDSTGI--KGGMDGSVCDAEGHIWNARWGE-----GAVDRYDTDGNHIAR 265 (326)
T ss_dssp ----TCEEEEEEBCTTTCCBSSCCEEEEECTTS--SSEEEEEEECTTSCEEEEEETT-----TEEEEECTTCCEEEE
T ss_pred ----CCEEEEEEcccccCCcccCceEEEECCCC--CCCCCeeEECCCCCEEEEEeCC-----CEEEEECCCCCEEEE
Confidence 3578999875 43 2 3222211 1111223322 56777763211 268999996544333
|
| >1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2 | Back alignment and structure |
|---|
Probab=94.80 E-value=0.0049 Score=50.96 Aligned_cols=85 Identities=16% Similarity=0.284 Sum_probs=61.4
Q ss_pred EEEEecCCcEEeceeeeecccCHHHHHhhcCCC----CcCCccceEEcCCCCHHHHHHHhhhhccCceecChh-hHHHHH
Q psy14726 95 ATIVLADNSHFPIHRNILCACSDYFRALFTTSL----HDQEKFSLVEIPGVDASVMTSLIEYAYLRKLHITED-NVASLL 169 (712)
Q Consensus 95 v~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~----~e~~~~~~i~l~~~~~~~f~~~l~~~Yt~~~~i~~~-~~~~ll 169 (712)
|+|.| +|+.|...+..|..... .||.... ..... .++.| |=++..|+.||+|+-+|++.++.+ .+..++
T Consensus 2 V~LNV-GG~~f~t~~~TL~~~p~---s~L~~~~~~~~~~~~~-~~~Fi-DRdp~~F~~ILnflR~g~l~~p~~~~~~~l~ 75 (105)
T 1nn7_A 2 IVLNV-SGTRFQTWQDTLERYPD---TLLGSSERDFFYHPET-QQYFF-DRDPDIFRHILNFYRTGKLHYPRHECISAYD 75 (105)
T ss_dssp EEEEE-TTEEEEECHHHHHTSCS---SSTTSGGGGGGEEGGG-TEEEE-CSCTTTHHHHHHHHHHSCBCCCTTSCHHHHH
T ss_pred EEEEE-CCEEEEEeHHHHhcCCC---ccccccCCcccccCCC-CcEEE-eCCcHHHHHHHHHHhcCCCCCCCCcCHHHHH
Confidence 78899 99999999998876532 2333310 11123 56666 469999999999999999887654 478899
Q ss_pred HHhhhcChHHHH-HHHH
Q psy14726 170 LATDFFCMSKAQ-DLCC 185 (712)
Q Consensus 170 ~~A~~~~i~~L~-~~c~ 185 (712)
+-|++|+|+.+. +.|+
T Consensus 76 ~Ea~fy~i~~l~~~~cc 92 (105)
T 1nn7_A 76 EELAFFGLIPEIIGDCC 92 (105)
T ss_dssp HHHHHHTCCSCCBCHHH
T ss_pred HHHHHcCCCHHHHHHHH
Confidence 999999998763 4443
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=94.73 E-value=4 Score=41.08 Aligned_cols=150 Identities=9% Similarity=0.135 Sum_probs=78.5
Q ss_pred CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeE-
Q psy14726 443 HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWT- 519 (712)
Q Consensus 443 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~- 519 (712)
++..++.|+.+ ..+..||..+.+-........... ..++.+ ++.+++.|+.++ .+..||..+.+-.
T Consensus 138 ~~~~l~s~s~d-----g~i~~wd~~~~~~~~~~~~~~~~~-i~~~~~~pdg~~lasg~~dg-----~i~iwd~~~~~~~~ 206 (343)
T 3lrv_A 138 NTEYFIWADNR-----GTIGFQSYEDDSQYIVHSAKSDVE-YSSGVLHKDSLLLALYSPDG-----ILDVYNLSSPDQAS 206 (343)
T ss_dssp -CCEEEEEETT-----CCEEEEESSSSCEEEEECCCSSCC-CCEEEECTTSCEEEEECTTS-----CEEEEESSCTTSCC
T ss_pred CCCEEEEEeCC-----CcEEEEECCCCcEEEEEecCCCCc-eEEEEECCCCCEEEEEcCCC-----EEEEEECCCCCCCc
Confidence 56777777754 458899988877644332222211 222333 678888888664 5888998877532
Q ss_pred -EeCCCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCcEE-EcCCCCCC--ccceEEEEE--CCEEEEEc
Q psy14726 520 -LIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWS-QVPDMYNP--RSNFAIEVI--DDMIFAIG 591 (712)
Q Consensus 520 -~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~-~~~~~p~~--r~~~~~~~~--~~~i~v~G 591 (712)
.+.. ... .....+.+ ++..++.|+ + +.+..||..+.+-. .+...... .....++.+ +++.++.|
T Consensus 207 ~~~~~-~h~-~~v~~l~fs~~g~~l~s~~-~-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~ 278 (343)
T 3lrv_A 207 SRFPV-DEE-AKIKEVKFADNGYWMVVEC-D-----QTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAY 278 (343)
T ss_dssp EECCC-CTT-SCEEEEEECTTSSEEEEEE-S-----SBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEE
T ss_pred cEEec-cCC-CCEEEEEEeCCCCEEEEEe-C-----CeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEe
Confidence 2211 111 22222333 566666666 2 27889998765311 11111000 011012333 56666665
Q ss_pred cc-CCCceeeeEEEEECCCCeEEE
Q psy14726 592 GF-NGVTTIYHVECYDEKTDEWYE 614 (712)
Q Consensus 592 G~-~~~~~~~~v~~yd~~~~~W~~ 614 (712)
+. ++ . -.+|-|+.....|..
T Consensus 279 s~~d~-~--i~v~~~~~~~~~~~~ 299 (343)
T 3lrv_A 279 SNESN-S--LTIYKFDKKTKNWTK 299 (343)
T ss_dssp ETTTT-E--EEEEEECTTTCSEEE
T ss_pred cCCCC-c--EEEEEEcccccceEe
Confidence 54 33 1 245555567788987
|
| >3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=94.72 E-value=3.6 Score=42.61 Aligned_cols=233 Identities=10% Similarity=0.057 Sum_probs=123.9
Q ss_pred EEEEECCC--CcEEEcccCCCCCCCcceEEEEE---CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCC---CCC--c
Q psy14726 365 VETYDTRA--DRWVKIEQVDPMGPRAYHGTAVI---GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPM---NFK--R 434 (712)
Q Consensus 365 v~~~d~~~--~~W~~~~~~~~~~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~---~~~--r 434 (712)
+..++... ..|..+.. . .....-+++++. ++.||+.+.... .-..+++.+....+|+.+... +.. +
T Consensus 33 l~~~~~~~~g~~W~~~~~-~-~~~~~v~~i~~dp~~~~~l~~g~~~g~--~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~ 108 (394)
T 3b7f_A 33 AWFLASDPARRTWELRGP-V-FLGHTIHHIVQDPREPERMLMAARTGH--LGPTVFRSDDGGGNWTEATRPPAFNKAPEG 108 (394)
T ss_dssp EEEEEECTTSCSEEEEEE-E-STTSEEEEEEECSSSTTCEEEEEEC----CCEEEEEESSTTSCCEECSBCCCCCCCC--
T ss_pred eEEEECCCCCCCceECCc-c-CCCCceEEEEECCCCCCeEEEEecCCC--CCccEEEeCCCCCCceECCccccCCCcccc
Confidence 66676554 68987421 1 112223444443 467887654211 112578888888899988642 211 1
Q ss_pred -------ceeEEEEE----CCeEEEEcccCCCCCCceeEEeecCCCceEEcccC---Ccc--------------ccceeE
Q psy14726 435 -------CYVSTAVH----HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPM---NVE--------------RSDASA 486 (712)
Q Consensus 435 -------~~~~~~~~----~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~---p~~--------------r~~~~~ 486 (712)
.-.+++.- .+.||+.+. ...+++.+-...+|+.+... |.. ..-+++
T Consensus 109 ~~~~~~~~i~~l~~~~~~~~~~l~~g~~------~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i 182 (394)
T 3b7f_A 109 ETGRVVDHVFWLTPGHASEPGTWYAGTS------PQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSI 182 (394)
T ss_dssp --CCCCCEEEEEEECCTTSTTCEEEEEE------TTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEE
T ss_pred cccccccceeEEEeCCCCCCCEEEEEec------CCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEE
Confidence 11233333 567887542 13588888888999988542 211 111222
Q ss_pred EEE---CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCC------CCC-----CcceEEEEEC---CEEEEEcCCCCC
Q psy14726 487 TTL---QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPM------RHR-----RSGVSCIAYH---ECIYVIGGFNGM 549 (712)
Q Consensus 487 ~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~------p~~-----r~~~~~~~~~---~~iyv~GG~~~~ 549 (712)
+.- .+.||+..+. ..+++.+-...+|+.+..- |.+ ...+.++... +.||+..+
T Consensus 183 ~~d~~~~~~l~vg~~~------ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~---- 252 (394)
T 3b7f_A 183 LVDPRDPKHLYIGMSS------GGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNH---- 252 (394)
T ss_dssp EECTTCTTCEEEEEET------BEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEET----
T ss_pred EECCCCCCEEEEEECC------CCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcC----
Confidence 222 2568876432 2377887778899988531 211 1233444332 67777532
Q ss_pred CccceEEEEeCCCCcEEEcCC-CCCC--ccceEEEEE---CCEEEEEcccCCC-------ceeeeEEEEECCCCeEEEcc
Q psy14726 550 SRMCNGEKYNPVTKTWSQVPD-MYNP--RSNFAIEVI---DDMIFAIGGFNGV-------TTIYHVECYDEKTDEWYEAT 616 (712)
Q Consensus 550 ~~~~~v~~yd~~~~~W~~~~~-~p~~--r~~~~~~~~---~~~i~v~GG~~~~-------~~~~~v~~yd~~~~~W~~~~ 616 (712)
..+++.+-...+|+.+.. +|.. .....++.. .+.||+.....+. .....+++-.-...+|+.+.
T Consensus 253 ---~gl~~s~D~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~ 329 (394)
T 3b7f_A 253 ---CGIYRMDRREGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQD 329 (394)
T ss_dssp ---TEEEEEETTTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEEC
T ss_pred ---CeEEEeCCCCCcceECCCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECC
Confidence 458888888899999854 4432 223334332 4667776311110 00112333333346899874
Q ss_pred -CCCC
Q psy14726 617 -DMNI 620 (712)
Q Consensus 617 -~~p~ 620 (712)
.+|.
T Consensus 330 ~glp~ 334 (394)
T 3b7f_A 330 RGLPT 334 (394)
T ss_dssp BTSCC
T ss_pred CCCCC
Confidence 3554
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=94.70 E-value=3.9 Score=40.81 Aligned_cols=238 Identities=9% Similarity=-0.052 Sum_probs=118.6
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEE
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 426 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 426 (712)
+.+++.+.. ...+..||+.++++..+... ....-.+++.. ++.+|+.+.... .....+++||+.++....
T Consensus 56 g~l~~~~~~-----~~~i~~~d~~~~~~~~~~~~---~~~~~~~i~~~~dg~l~v~~~~~~-~~~~~i~~~d~~~~~~~~ 126 (333)
T 2dg1_A 56 GQLFLLDVF-----EGNIFKINPETKEIKRPFVS---HKANPAAIKIHKDGRLFVCYLGDF-KSTGGIFAATENGDNLQD 126 (333)
T ss_dssp SCEEEEETT-----TCEEEEECTTTCCEEEEEEC---SSSSEEEEEECTTSCEEEEECTTS-SSCCEEEEECTTSCSCEE
T ss_pred CCEEEEECC-----CCEEEEEeCCCCcEEEEeeC---CCCCcceEEECCCCcEEEEeCCCC-CCCceEEEEeCCCCEEEE
Confidence 456665532 24688999988887664211 12223444444 677887654221 122479999999887653
Q ss_pred e-CCCCCCcceeEEEE-ECCeEEEEcccC-CCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CC-EEEEEcccC
Q psy14726 427 I-APMNFKRCYVSTAV-HHDVIYAMGGYN-GQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QG-KIYITGGFN 500 (712)
Q Consensus 427 ~-~~~~~~r~~~~~~~-~~~~iyv~GG~~-~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~ 500 (712)
+ ........-..++. -+|++|+..... .......++++|+.+.+...+..- ........+ ++ .+|+....
T Consensus 127 ~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~i~~~~dg~~l~v~~~~- 202 (333)
T 2dg1_A 127 IIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN---ISVANGIALSTDEKVLWVTETT- 202 (333)
T ss_dssp EECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE---ESSEEEEEECTTSSEEEEEEGG-
T ss_pred EEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC---CCcccceEECCCCCEEEEEeCC-
Confidence 3 32222222223333 367888864321 112245799999988776654321 011122233 44 58886532
Q ss_pred CCCccCceEEeeCCCC--eeEEeC-----CCCCCCcceEEEEE-CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCC
Q psy14726 501 GHNCLNSCEVYDPECN--QWTLIE-----PMRHRRSGVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMY 572 (712)
Q Consensus 501 ~~~~~~~v~~yd~~~~--~W~~~~-----~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p 572 (712)
.+.+++||+.++ ....+. ..+....-.+++.. ++.||+.... ...+.+||++...-..+. .+
T Consensus 203 ----~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~-----~~~v~~~d~~g~~~~~~~-~~ 272 (333)
T 2dg1_A 203 ----ANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYG-----QGRVLVFNKRGYPIGQIL-IP 272 (333)
T ss_dssp ----GTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEET-----TTEEEEECTTSCEEEEEE-CT
T ss_pred ----CCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcC-----CCEEEEECCCCCEEEEEE-cC
Confidence 246888988542 232211 11111111222222 5778887532 247889999655444442 22
Q ss_pred CCc-----cceEEEEE-C-CEEEEEcccCCCceeeeEEEEECC
Q psy14726 573 NPR-----SNFAIEVI-D-DMIFAIGGFNGVTTIYHVECYDEK 608 (712)
Q Consensus 573 ~~r-----~~~~~~~~-~-~~i~v~GG~~~~~~~~~v~~yd~~ 608 (712)
... ...+++.- + +.||+.+..........++.+++.
T Consensus 273 ~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~~ 315 (333)
T 2dg1_A 273 GRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGF 315 (333)
T ss_dssp TGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEECS
T ss_pred CCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEecc
Confidence 110 11223332 3 467765433221122356777654
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=94.68 E-value=0.87 Score=46.82 Aligned_cols=213 Identities=9% Similarity=-0.010 Sum_probs=103.1
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV 441 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~ 441 (712)
..+..+|........+..... ....-.+++.. ++..++.|+.+ ..+..||........+..-. ..-.+++.
T Consensus 141 ~~i~iwd~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~h~--~~v~~~~~ 212 (383)
T 3ei3_B 141 GATTLRDFSGSVIQVFAKTDS-WDYWYCCVDVSVSRQMLATGDST-----GRLLLLGLDGHEIFKEKLHK--AKVTHAEF 212 (383)
T ss_dssp TEEEEEETTSCEEEEEECCCC-SSCCEEEEEEETTTTEEEEEETT-----SEEEEEETTSCEEEEEECSS--SCEEEEEE
T ss_pred CEEEEEECCCCceEEEeccCC-CCCCeEEEEECCCCCEEEEECCC-----CCEEEEECCCCEEEEeccCC--CcEEEEEE
Confidence 467888988776665432211 11122333333 56677777754 46889998554444332211 11122333
Q ss_pred E-CCe-EEEEcccCCCCCCceeEEeecCC----CceEEcccCCccccceeEEEE---CCEEEEEcccCCCCccCceEEee
Q psy14726 442 H-HDV-IYAMGGYNGQRRQNSVEKYNYTE----NQWSLIAPMNVERSDASATTL---QGKIYITGGFNGHNCLNSCEVYD 512 (712)
Q Consensus 442 ~-~~~-iyv~GG~~~~~~~~~v~~yd~~~----~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd 512 (712)
. ++. +++.|+.+ ..+..||..+ ......- ... .....+.+ ++..++.|+.+ ..+..||
T Consensus 213 ~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~--~~~-~~v~~~~~s~~~~~~l~~~~~d-----~~i~iwd 279 (383)
T 3ei3_B 213 NPRCDWLMATSSVD-----ATVKLWDLRNIKDKNSYIAEM--PHE-KPVNAAYFNPTDSTKLLTTDQR-----NEIRVYS 279 (383)
T ss_dssp CSSCTTEEEEEETT-----SEEEEEEGGGCCSTTCEEEEE--ECS-SCEEEEEECTTTSCEEEEEESS-----SEEEEEE
T ss_pred CCCCCCEEEEEeCC-----CEEEEEeCCCCCcccceEEEe--cCC-CceEEEEEcCCCCCEEEEEcCC-----CcEEEEE
Confidence 2 344 77777753 4688899877 3332211 111 11222232 56777777755 3577888
Q ss_pred CCCCee--EEe--CCC------CC-----CCcceEEE--EECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCc
Q psy14726 513 PECNQW--TLI--EPM------RH-----RRSGVSCI--AYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPR 575 (712)
Q Consensus 513 ~~~~~W--~~~--~~~------p~-----~r~~~~~~--~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r 575 (712)
..+.+- +.. ... +. +.....++ .-++++ .|+. -..+..||..+.+....-..+...
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~-----d~~i~iwd~~~~~~~~~l~~~~~~ 352 (383)
T 3ei3_B 280 SYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLND-----KRTIDIYDANSGGLVHQLRDPNAA 352 (383)
T ss_dssp TTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTC-----CCCEEEEETTTCCEEEEECBTTBC
T ss_pred CCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCC-----CCeEEEEecCCCceeeeecCCCCC
Confidence 765431 111 000 00 00111111 113333 3332 357889999877653332211111
Q ss_pred cceEEEEE--CCEEEEEcccCCCceeeeEEEEECCC
Q psy14726 576 SNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKT 609 (712)
Q Consensus 576 ~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~ 609 (712)
....++.+ ++++++.|+ ++ .+.+||+++
T Consensus 353 ~~~~~~~~s~~g~~l~s~s-d~-----~i~iw~~~~ 382 (383)
T 3ei3_B 353 GIISLNKFSPTGDVLASGM-GF-----NILIWNRED 382 (383)
T ss_dssp SCCCEEEECTTSSEEEEEE-TT-----EEEEEECC-
T ss_pred ceEEEEEEecCccEEEEec-CC-----cEEEEecCC
Confidence 11222222 677777775 33 578888764
|
| >1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A* | Back alignment and structure |
|---|
Probab=94.65 E-value=3.3 Score=43.78 Aligned_cols=212 Identities=14% Similarity=0.143 Sum_probs=114.4
Q ss_pred CceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEECCEEEEEeecCCCCccceEEEEECCCCc---
Q psy14726 347 HEILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKV--- 423 (712)
Q Consensus 347 ~~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~--- 423 (712)
.+.++++.| +..+.||..++......-+.+| .. -++....+++|+|-| +..|+||+.+.+
T Consensus 158 ~~~~yfFkG-------~~yw~yd~~~~~~~~~~w~gi~--~i-DAA~~~~g~~YfFkG-------~~y~rfd~~~~~v~~ 220 (460)
T 1qhu_A 158 DEGILFFQG-------NRKWFWDLTTGTKKERSWPAVG--NC-TSALRWLGRYYCFQG-------NQFLRFNPVSGEVPP 220 (460)
T ss_dssp SSEEEEEET-------TEEEEEETTTTEEEEECCTTSC--CC-SEEEEETTEEEEEET-------TEEEEECTTTCCCCT
T ss_pred CCeEEEEec-------ccEEEEecccceeecccCCCCC--cc-chheeeCCceEEEEC-------CEEEEEcCccCcccC
Confidence 345566665 3578899887765432112222 22 233334789999988 467888876654
Q ss_pred ---------EEEeCCCC------------------CCc-ceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceE--
Q psy14726 424 ---------WKEIAPMN------------------FKR-CYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWS-- 472 (712)
Q Consensus 424 ---------W~~~~~~~------------------~~r-~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~-- 472 (712)
|..++... .+. .--+++. .+|++|+|-| +..|++|.....+.
T Consensus 221 gyPk~is~~w~~c~~~g~~~~~~~st~~~~~p~~C~p~~~~DAi~~~~~G~tYFFKg-------~~yWR~~~~~~~~~p~ 293 (460)
T 1qhu_A 221 GYPLDVRDYFLSCPGRGHRSSHRNSTQHGHESTRCDPDLVLSAMVSDNHGATYVFSG-------SHYWRLDTNRDGWHSW 293 (460)
T ss_dssp TCCEEHHHHTSCCTTCCSCC-------CCCTTTTTCTTCCCCEEEECTTCCEEEEET-------TEEEECTTGGGCCCCE
T ss_pred CCCcchhhcccCCCCCCCccccccCCccccccccccCCCCcCEEEecCCCeEEEEeC-------CEEEEEecCCCCcCcc
Confidence 22222110 011 1223333 4689999977 45777776543321
Q ss_pred Ec----ccCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCeeEEeC----------CCCCC--CcceEEEEE
Q psy14726 473 LI----APMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIE----------PMRHR--RSGVSCIAY 536 (712)
Q Consensus 473 ~~----~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~----------~~p~~--r~~~~~~~~ 536 (712)
.+ +.+|.. --++...++++|+|=| +.+++|+..++ .+..+ .+|.. ....-++..
T Consensus 294 ~Is~~WpglP~~--IDAAf~~~~~~yfFkG-------~~yw~f~~~~g-~~~~~GyPK~I~~~lGlp~~~~~~~IDAA~~ 363 (460)
T 1qhu_A 294 PIAHQWPQGPST--VDAAFSWEDKLYLIQD-------TKVYVFLTKGG-YTLVNGYPKRLEKELGSPPVISLEAVDAAFV 363 (460)
T ss_dssp EGGGTCTTSCSS--CSEEEEETTEEEEEET-------TEEEEEECSBS-CEECTTCCEEHHHHHCCCSSCCCSCCCEEEC
T ss_pred chhhhccCCCCC--CcEEEEECCeEEEEeC-------CEEEEEeCCCC-ceecCCCCeEHHHhccCCCccccCcccEEEE
Confidence 11 223322 2344455889999976 45888876431 22222 12222 122223332
Q ss_pred ---CCEEEEEcCCCCCCccceEEEEeCCCC---cEEEcCCCCCCccceEEEE------------ECCEEEEEcccCCCce
Q psy14726 537 ---HECIYVIGGFNGMSRMCNGEKYNPVTK---TWSQVPDMYNPRSNFAIEV------------IDDMIFAIGGFNGVTT 598 (712)
Q Consensus 537 ---~~~iyv~GG~~~~~~~~~v~~yd~~~~---~W~~~~~~p~~r~~~~~~~------------~~~~i~v~GG~~~~~~ 598 (712)
++++|++-| +..|+||.... .|...+..|. .. .++.. .++.+|++-|.
T Consensus 364 ~~~~~ktyfFkG-------~~ywryd~~~~Pr~i~~~~~gi~~-~v-dAaf~~~~~~~~~~~~~~~~~~yfF~g~----- 429 (460)
T 1qhu_A 364 CPGSSRLHIMAG-------RRLWWLDLKSGAQATWTELPWPHE-KV-DGALCMEKPLGPNSCSTSGPNLYLIHGP----- 429 (460)
T ss_dssp CTTCCEEEEEET-------TEEEEEEGGGGGGCCCEEECCSCS-CC-SEEEEESSCSSSCCSCSSSCEEEEEETT-----
T ss_pred eCCCCEEEEEEC-------CEEEEEECCCCccchhhhCCCCCC-Cc-CEEEecccccCcccccccCCeEEEEECC-----
Confidence 589999988 57889987632 2222222221 22 23333 45778888663
Q ss_pred eeeEEEEECC
Q psy14726 599 IYHVECYDEK 608 (712)
Q Consensus 599 ~~~v~~yd~~ 608 (712)
..+.||..
T Consensus 430 --~y~~~~~~ 437 (460)
T 1qhu_A 430 --NLYCYRHV 437 (460)
T ss_dssp --EEEEESSH
T ss_pred --EEEEEcCh
Confidence 56777754
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=94.63 E-value=0.58 Score=47.16 Aligned_cols=153 Identities=14% Similarity=0.095 Sum_probs=78.7
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE-ECC-eEEEEcccCCCCCCceeEEeecCCCceEE
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-HHD-VIYAMGGYNGQRRQNSVEKYNYTENQWSL 473 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 473 (712)
++.+|+.++. ...++.+|+.+++....-+.+.....+.++. -++ .+|+.++. ...+++||+.+.+-..
T Consensus 10 ~~~~~v~~~~-----~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~-----~~~i~~~d~~t~~~~~ 79 (349)
T 1jmx_B 10 GHEYMIVTNY-----PNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH-----YGDIYGIDLDTCKNTF 79 (349)
T ss_dssp TCEEEEEEET-----TTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETT-----TTEEEEEETTTTEEEE
T ss_pred CCEEEEEeCC-----CCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCC-----CCcEEEEeCCCCcEEE
Confidence 5678888774 3579999999987654333332111233333 344 57776532 2579999998877543
Q ss_pred cccCCc-----cccceeEEEE-CC-EEEEEccc---CCC---CccCceEEeeCCCCeeEE-eCCCCCCCcceEE-EEECC
Q psy14726 474 IAPMNV-----ERSDASATTL-QG-KIYITGGF---NGH---NCLNSCEVYDPECNQWTL-IEPMRHRRSGVSC-IAYHE 538 (712)
Q Consensus 474 ~~~~p~-----~r~~~~~~~~-~~-~iyv~GG~---~~~---~~~~~v~~yd~~~~~W~~-~~~~p~~r~~~~~-~~~~~ 538 (712)
.-..+. ...-..++.- ++ .+|+.+.. ... .....+.+||+.+++-.. +...+.++.-.++ ..-++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg 159 (349)
T 1jmx_B 80 HANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDG 159 (349)
T ss_dssp EEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTS
T ss_pred EEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCC
Confidence 322221 1111222222 44 55555421 000 012578999987743211 1111112222222 22356
Q ss_pred EEEEEcCCCCCCccceEEEEeCCCCcEE
Q psy14726 539 CIYVIGGFNGMSRMCNGEKYNPVTKTWS 566 (712)
Q Consensus 539 ~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 566 (712)
++|+.++ ++.++|+.+.+-.
T Consensus 160 ~l~~~~~--------~i~~~d~~~~~~~ 179 (349)
T 1jmx_B 160 SLYVAGP--------DIYKMDVKTGKYT 179 (349)
T ss_dssp CEEEESS--------SEEEECTTTCCEE
T ss_pred cEEEccC--------cEEEEeCCCCcee
Confidence 6777543 3888888776544
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=94.60 E-value=1.4 Score=48.33 Aligned_cols=190 Identities=10% Similarity=0.033 Sum_probs=96.4
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCC----c-EEEeCCCCCCcceeEEEE-E--CCeEEEEcccCCCCCCceeEEeecC
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTK----V-WKEIAPMNFKRCYVSTAV-H--HDVIYAMGGYNGQRRQNSVEKYNYT 467 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~----~-W~~~~~~~~~r~~~~~~~-~--~~~iyv~GG~~~~~~~~~v~~yd~~ 467 (712)
++..+++|+ + ..+..||..+. + -..+..-. ...-.+++. - +++.++.|+.+ ..+.+||..
T Consensus 29 dg~~l~~~~-~-----~~v~v~~~~~~~~~~~~~~~~~~h~-~~~v~~~~~sp~~~~~~l~s~~~d-----g~v~vw~~~ 96 (615)
T 1pgu_A 29 TTNAIAYPC-G-----KSAFVRCLDDGDSKVPPVVQFTGHG-SSVVTTVKFSPIKGSQYLCSGDES-----GKVIVWGWT 96 (615)
T ss_dssp TTTEEEEEE-T-----TEEEEEECCSSCCSSCSEEEECTTT-TSCEEEEEECSSTTCCEEEEEETT-----SEEEEEEEE
T ss_pred CCCEEEEec-C-----CeEEEEECCCCCCccccceEEecCC-CceEEEEEECcCCCCCEEEEecCC-----CEEEEEeCC
Confidence 566666666 1 36889998876 3 22222211 110223333 3 66788887753 468888876
Q ss_pred CC------ceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--C
Q psy14726 468 EN------QWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--H 537 (712)
Q Consensus 468 ~~------~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~ 537 (712)
+. ....+..+...........+ +++.++.+|.+.. ....++.+|... .-.. +.........+.+ +
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~-~~~~v~~~d~~~-~~~~---~~~~~~~v~~~~~~~~ 171 (615)
T 1pgu_A 97 FDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRD-NFGVFISWDSGN-SLGE---VSGHSQRINACHLKQS 171 (615)
T ss_dssp EEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSS-CSEEEEETTTCC-EEEE---CCSCSSCEEEEEECSS
T ss_pred CCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCC-CccEEEEEECCC-ccee---eecCCccEEEEEECCC
Confidence 54 33333333222222223333 5666666664431 234677777332 1111 2211122222222 3
Q ss_pred CE-EEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCcc---ceEEEEE--C-CEEEEEcccCCCceeeeEEEEECCCC
Q psy14726 538 EC-IYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRS---NFAIEVI--D-DMIFAIGGFNGVTTIYHVECYDEKTD 610 (712)
Q Consensus 538 ~~-iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~---~~~~~~~--~-~~i~v~GG~~~~~~~~~v~~yd~~~~ 610 (712)
+. +++.|+.+ ..+..||..+.+-... +..... ....+.+ + +..++.|+.++ .+.+||..++
T Consensus 172 ~~~~l~~~~~d-----~~v~vwd~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-----~i~vwd~~~~ 239 (615)
T 1pgu_A 172 RPMRSMTVGDD-----GSVVFYQGPPFKFSAS--DRTHHKQGSFVRDVEFSPDSGEFVITVGSDR-----KISCFDGKSG 239 (615)
T ss_dssp SSCEEEEEETT-----TEEEEEETTTBEEEEE--ECSSSCTTCCEEEEEECSTTCCEEEEEETTC-----CEEEEETTTC
T ss_pred CCcEEEEEeCC-----CcEEEEeCCCcceeee--ecccCCCCceEEEEEECCCCCCEEEEEeCCC-----eEEEEECCCC
Confidence 33 66667653 5788899776543322 111111 2223333 5 77888888765 5788898876
Q ss_pred eEEE
Q psy14726 611 EWYE 614 (712)
Q Consensus 611 ~W~~ 614 (712)
+...
T Consensus 240 ~~~~ 243 (615)
T 1pgu_A 240 EFLK 243 (615)
T ss_dssp CEEE
T ss_pred CEeE
Confidence 6543
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=94.59 E-value=2.8 Score=41.15 Aligned_cols=190 Identities=9% Similarity=-0.044 Sum_probs=101.7
Q ss_pred CEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcc
Q psy14726 397 YNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA 475 (712)
Q Consensus 397 ~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 475 (712)
+.+|+++.. ...+++||+.++ ...+... . ..-.+++. -+|++|+.... ...+.+||+.+.+...+.
T Consensus 40 ~~l~~~~~~-----~~~i~~~~~~~~-~~~~~~~-~-~~~~~l~~~~dg~l~v~~~~-----~~~i~~~d~~~g~~~~~~ 106 (296)
T 3e5z_A 40 SAVIFSDVR-----QNRTWAWSDDGQ-LSPEMHP-S-HHQNGHCLNKQGHLIACSHG-----LRRLERQREPGGEWESIA 106 (296)
T ss_dssp TEEEEEEGG-----GTEEEEEETTSC-EEEEESS-C-SSEEEEEECTTCCEEEEETT-----TTEEEEECSTTCCEEEEE
T ss_pred CEEEEEeCC-----CCEEEEEECCCC-eEEEECC-C-CCcceeeECCCCcEEEEecC-----CCeEEEEcCCCCcEEEEe
Confidence 457877753 246899999988 6555332 1 12234443 36788876431 256999999888877663
Q ss_pred cCCcc----ccceeEEEECCEEEEE----cccCC--------CCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CC
Q psy14726 476 PMNVE----RSDASATTLQGKIYIT----GGFNG--------HNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HE 538 (712)
Q Consensus 476 ~~p~~----r~~~~~~~~~~~iyv~----GG~~~--------~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~ 538 (712)
..... +....+..-+|++|+. |.... ......+++||+. ++...+..-. ..-.+++.. ++
T Consensus 107 ~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~--~~~~gi~~s~dg 183 (296)
T 3e5z_A 107 DSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDR--VKPNGLAFLPSG 183 (296)
T ss_dssp CEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCC--SSEEEEEECTTS
T ss_pred eccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCC--CCCccEEECCCC
Confidence 32111 1111222227889987 43210 1113479999987 5555443211 111223322 56
Q ss_pred EEEEEcCCCCCCccceEEEEeCC-CCcE-E--EcCCCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCeEE
Q psy14726 539 CIYVIGGFNGMSRMCNGEKYNPV-TKTW-S--QVPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEWY 613 (712)
Q Consensus 539 ~iyv~GG~~~~~~~~~v~~yd~~-~~~W-~--~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 613 (712)
++++.+.. ...+++||+. +.+. . .+-..... .-.+++.- +|.||+.. + ..+.+||++.....
T Consensus 184 ~~lv~~~~-----~~~i~~~~~~~~g~~~~~~~~~~~~~~-~p~~i~~d~~G~l~v~~--~-----~~v~~~~~~g~~~~ 250 (296)
T 3e5z_A 184 NLLVSDTG-----DNATHRYCLNARGETEYQGVHFTVEPG-KTDGLRVDAGGLIWASA--G-----DGVHVLTPDGDELG 250 (296)
T ss_dssp CEEEEETT-----TTEEEEEEECSSSCEEEEEEEECCSSS-CCCSEEEBTTSCEEEEE--T-----TEEEEECTTSCEEE
T ss_pred CEEEEeCC-----CCeEEEEEECCCCcCcCCCeEeeCCCC-CCCeEEECCCCCEEEEc--C-----CeEEEECCCCCEEE
Confidence 65555432 3578899886 4555 1 11111111 11123332 77888876 1 36899999865544
Q ss_pred Ec
Q psy14726 614 EA 615 (712)
Q Consensus 614 ~~ 615 (712)
.+
T Consensus 251 ~~ 252 (296)
T 3e5z_A 251 RV 252 (296)
T ss_dssp EE
T ss_pred EE
Confidence 44
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=94.57 E-value=6 Score=44.96 Aligned_cols=240 Identities=11% Similarity=-0.001 Sum_probs=123.2
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCC---------CccceEEEEECCCCcE--EEeCCC
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGN---------EYYNSCRCFNAVTKVW--KEIAPM 430 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~---------~~~~~v~~yd~~~~~W--~~~~~~ 430 (712)
..++.+|..+++........ .. ..+.+.. + +-++++..+.. .....++.++..++.- ..+...
T Consensus 189 ~~i~v~dl~tg~~~~~~~~~---~~-~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~ 263 (741)
T 1yr2_A 189 RTVKFVGVADGKPLADELKW---VK-FSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFAT 263 (741)
T ss_dssp EEEEEEETTTCCEEEEEEEE---EE-SCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECC
T ss_pred EEEEEEECCCCCCCCccCCC---ce-eccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEecc
Confidence 46888999888876531100 00 0112222 4 33334433222 1245688888876652 122111
Q ss_pred C-CCcceeEEE-EECCeEEEEcccCCCCCCceeEEeecCCC--c-eEEcccCCccccceeEEEECCEEEEEcccCCCCcc
Q psy14726 431 N-FKRCYVSTA-VHHDVIYAMGGYNGQRRQNSVEKYNYTEN--Q-WSLIAPMNVERSDASATTLQGKIYITGGFNGHNCL 505 (712)
Q Consensus 431 ~-~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~v~~yd~~~~--~-W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~ 505 (712)
+ .+....+.. .-+|+..++.........+.++.+|..+. . |..+.+-....... ...-++.||+....+ ...
T Consensus 264 ~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~--~~~ 340 (741)
T 1yr2_A 264 PELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDG--APL 340 (741)
T ss_dssp TTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTT--CTT
T ss_pred CCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCC--CCC
Confidence 1 222223333 34565444443332223578999999887 6 88775433222222 223467788775432 224
Q ss_pred CceEEeeCCC--CeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEE-
Q psy14726 506 NSCEVYDPEC--NQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEV- 582 (712)
Q Consensus 506 ~~v~~yd~~~--~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~- 582 (712)
..++.+|..+ ..|+.+-+-... .-..+...++.+++....++ ...++.+|+....-..+. .|......+...
T Consensus 341 ~~l~~~d~~~~~~~~~~l~~~~~~-~l~~~~~~~~~lv~~~~~dg---~~~l~~~~~~g~~~~~l~-~~~~~~v~~~~~s 415 (741)
T 1yr2_A 341 KKIVRVDLSGSTPRFDTVVPESKD-NLESVGIAGNRLFASYIHDA---KSQVLAFDLDGKPAGAVS-LPGIGSASGLSGR 415 (741)
T ss_dssp CEEEEEECSSSSCEEEEEECCCSS-EEEEEEEEBTEEEEEEEETT---EEEEEEEETTSCEEEECB-CSSSCEEEEEECC
T ss_pred CEEEEEeCCCCccccEEEecCCCC-eEEEEEEECCEEEEEEEECC---EEEEEEEeCCCCceeecc-CCCCeEEEEeecC
Confidence 5789999887 579887532221 11233444788888765432 356888887655444443 221111111111
Q ss_pred ECC-EEEEEcccCCCceeeeEEEEECCCCeEEEccC
Q psy14726 583 IDD-MIFAIGGFNGVTTIYHVECYDEKTDEWYEATD 617 (712)
Q Consensus 583 ~~~-~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 617 (712)
-++ .|++.. .+. ..-..++.||..+++.+.+..
T Consensus 416 ~d~~~l~~~~-ss~-~~P~~i~~~d~~tg~~~~l~~ 449 (741)
T 1yr2_A 416 PGDRHAYLSF-SSF-TQPATVLALDPATAKTTPWEP 449 (741)
T ss_dssp BTCSCEEEEE-EET-TEEEEEEEEETTTTEEEECSC
T ss_pred CCCCEEEEEE-cCC-CCCCEEEEEECCCCcEEEEec
Confidence 133 344332 111 123478999999988777643
|
| >1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1 | Back alignment and structure |
|---|
Probab=94.55 E-value=2.1 Score=39.95 Aligned_cols=144 Identities=10% Similarity=0.015 Sum_probs=82.3
Q ss_pred EEEEECCeEEEEcccCCCCCCceeEEeecCCCceEE--c----ccCCccccceeEEEE--CCEEEEEcccCCCCccCceE
Q psy14726 438 STAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSL--I----APMNVERSDASATTL--QGKIYITGGFNGHNCLNSCE 509 (712)
Q Consensus 438 ~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~--~----~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~ 509 (712)
+++..+|.+|+|=| ..+|+++.....+.. + +.+|. ... ++... ++++|+|-| +.+|
T Consensus 28 Ai~~~~g~~y~Fkg-------~~~wr~~~~~~~~~p~~I~~~wp~Lp~-~iD-Aa~~~~~~~~iyfFkG-------~~~w 91 (207)
T 1pex_A 28 AITSLRGETMIFKD-------RFFWRLHPQQVDAELFLTKSFWPELPN-RID-AAYEHPSHDLIFIFRG-------RKFW 91 (207)
T ss_dssp EEEEETTEEEEEET-------TEEEEECSSSSCCEEEEHHHHCTTSCS-SCC-EEEEETTTTEEEEEET-------TEEE
T ss_pred EEEeCCCcEEEEEC-------CEEEEEeCCCcCCCceehhHhccCCCC-Ccc-EEEEeccCCcEEEEcc-------CEEE
Confidence 45567999999966 467888765544321 1 23442 222 22333 589999987 4577
Q ss_pred EeeCCCCee---EEeCC--CCCC--CcceEEEEE-CCEEEEEcCCCCCCccceEEEEeCCCCcEEEc---------CCCC
Q psy14726 510 VYDPECNQW---TLIEP--MRHR--RSGVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQV---------PDMY 572 (712)
Q Consensus 510 ~yd~~~~~W---~~~~~--~p~~--r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~---------~~~p 572 (712)
+|+..+-.- ..+.. +|.. .-.++.... ++++|++-| +..|+||..+++=..- +.+|
T Consensus 92 ~~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG-------~~ywr~d~~~~~~d~gyPr~i~~~~~Gip 164 (207)
T 1pex_A 92 ALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSG-------NQVWRYDDTNHIMDKDYPRLIEEDFPGIG 164 (207)
T ss_dssp EESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEET-------TEEEEEETTTTEECSSCCCBHHHHSTTSC
T ss_pred EEeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeC-------CEEEEEeCcCccccCCCCccHHHcCCCCC
Confidence 776432211 22332 3321 122222222 489999987 5789999876532110 1122
Q ss_pred CCccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeEE
Q psy14726 573 NPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWY 613 (712)
Q Consensus 573 ~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 613 (712)
..-.++...++++|+|-|. ..|.||..+.+=.
T Consensus 165 --~~iDaAf~~~g~~YfFkg~-------~y~rf~~~~~~v~ 196 (207)
T 1pex_A 165 --DKVDAVYEKNGYIYFFNGP-------IQFEYSIWSNRIV 196 (207)
T ss_dssp --SCCSEEEEETTEEEEEETT-------EEEEEETTTTEEE
T ss_pred --CCccEEEEcCCcEEEEECC-------EEEEEeCCccEEe
Confidence 2223444569999999663 6799998876543
|
| >1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A | Back alignment and structure |
|---|
Probab=94.53 E-value=0.013 Score=47.72 Aligned_cols=88 Identities=7% Similarity=0.071 Sum_probs=62.2
Q ss_pred EEEEecCCcEEeceeeeecccC-HHHHHhhcCC-CCcCCccceEEcCCCCHHHHHHHhhhhcc-CceecChh-hHHHHHH
Q psy14726 95 ATIVLADNSHFPIHRNILCACS-DYFRALFTTS-LHDQEKFSLVEIPGVDASVMTSLIEYAYL-RKLHITED-NVASLLL 170 (712)
Q Consensus 95 v~l~v~~~~~~~~Hk~vL~~~S-~yF~~mf~~~-~~e~~~~~~i~l~~~~~~~f~~~l~~~Yt-~~~~i~~~-~~~~ll~ 170 (712)
|+|.| +|+.|...+..|+..- ..+.+|+... ...... .++.| |=++..|+.||+|+-+ |++.++.+ .+..+++
T Consensus 3 v~LNV-GG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~-~eyFi-DRdp~~F~~ILnflR~~G~l~~p~~~~~~~~~~ 79 (100)
T 1t1d_A 3 VVINV-SGLRFETQLKTLNQFPDTLLGNPQKRNRYYDPLR-NEYFF-DRNRPSFDAILYFYQSGGRLRRPVNVPLDVFSE 79 (100)
T ss_dssp EEEEE-TTEEEEEEHHHHHTSTTSTTTCHHHHGGGEETTT-TEEEE-CSCSTTHHHHHHHHHTTSCCCCCTTSCHHHHHH
T ss_pred EEEEE-CCEEEEeeHHHHhcCCCccccchhccccccCCCc-eeEEE-cCChHHHHHHHHHHhcCCcccCCCCCCHHHHHH
Confidence 68889 9999999999996542 1333444321 111233 56776 5689999999999998 89877654 4688999
Q ss_pred HhhhcChHHHH-HHHH
Q psy14726 171 ATDFFCMSKAQ-DLCC 185 (712)
Q Consensus 171 ~A~~~~i~~L~-~~c~ 185 (712)
-|.+|+|+++. +.|.
T Consensus 80 Ea~fy~i~~~~~~~~~ 95 (100)
T 1t1d_A 80 EIKFYELGENAFERYR 95 (100)
T ss_dssp HHHHTTCCHHHHHHHH
T ss_pred HHHHcCCCHHHHHHHH
Confidence 99999997644 4443
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=94.45 E-value=5.5 Score=41.52 Aligned_cols=198 Identities=13% Similarity=0.068 Sum_probs=109.0
Q ss_pred eEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE--ECCeEEEEcccCCCCCCceeEEeec
Q psy14726 390 HGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV--HHDVIYAMGGYNGQRRQNSVEKYNY 466 (712)
Q Consensus 390 ~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~ 466 (712)
+++++. ++.||+.... ...+.++|+.+++-..+..... ..+ ++. -++.+|+...... ..++++|+
T Consensus 134 ~~la~d~~g~lyv~d~~-----~~~I~~id~~~g~~~~~~~~~~--~~~-ia~~~~g~~l~~~d~~~~----~~I~~~d~ 201 (409)
T 3hrp_A 134 WGIAAVGNNTVLAYQRD-----DPRVRLISVDDNKVTTVHPGFK--GGK-PAVTKDKQRVYSIGWEGT----HTVYVYMK 201 (409)
T ss_dssp EEEEECSTTEEEEEETT-----TTEEEEEETTTTEEEEEEETCC--BCB-CEECTTSSEEEEEBSSTT----CEEEEEEG
T ss_pred eEEEEeCCCCEEEEecC-----CCcEEEEECCCCEEEEeeccCC--CCc-eeEecCCCcEEEEecCCC----ceEEEEEc
Confidence 344443 6789988652 2579999999887665543321 122 222 2346777643211 27999998
Q ss_pred CCCc-eEEcccCC--ccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCC---CCCCCcc-e-EEEEE
Q psy14726 467 TENQ-WSLIAPMN--VERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEP---MRHRRSG-V-SCIAY 536 (712)
Q Consensus 467 ~~~~-W~~~~~~p--~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~---~p~~r~~-~-~~~~~ 536 (712)
.+.. ...+...+ ....-+++++- ++.||+..+ ...+++||+.+.....+.. ....... . .++..
T Consensus 202 ~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~ 275 (409)
T 3hrp_A 202 ASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDS------NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYY 275 (409)
T ss_dssp GGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECT------TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEE
T ss_pred CCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEEC------CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEe
Confidence 7653 23332211 11222333333 689999432 2479999999887665521 1111122 1 44444
Q ss_pred --CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCC--CC--------C--ccceEEEEE-CCEEEEEcc-cCCCceee
Q psy14726 537 --HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDM--YN--------P--RSNFAIEVI-DDMIFAIGG-FNGVTTIY 600 (712)
Q Consensus 537 --~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~--p~--------~--r~~~~~~~~-~~~i~v~GG-~~~~~~~~ 600 (712)
++.||+.... ...|++||+....-...+.. +. . ..-.+++.- ++.||+.-. .+ .
T Consensus 276 p~~g~lyv~d~~-----~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~-----~ 345 (409)
T 3hrp_A 276 FVDSNFYMSDQN-----LSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKG-----Y 345 (409)
T ss_dssp TTTTEEEEEETT-----TTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTT-----C
T ss_pred CCCCEEEEEeCC-----CCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCC-----C
Confidence 5899998643 36799999876522222221 00 0 111233333 577998853 22 3
Q ss_pred eEEEEECCCCeEEEc
Q psy14726 601 HVECYDEKTDEWYEA 615 (712)
Q Consensus 601 ~v~~yd~~~~~W~~~ 615 (712)
.|.++|+.++....+
T Consensus 346 ~I~~~~~~~G~v~~~ 360 (409)
T 3hrp_A 346 CLRKLDILDGYVSTV 360 (409)
T ss_dssp EEEEEETTTTEEEEE
T ss_pred EEEEEECCCCEEEEE
Confidence 689999777776655
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=94.39 E-value=0.91 Score=49.71 Aligned_cols=189 Identities=9% Similarity=-0.051 Sum_probs=95.8
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEE-CC-eEEEEcccCCCCCCceeEEeec--CCCce
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH-HD-VIYAMGGYNGQRRQNSVEKYNY--TENQW 471 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~--~~~~W 471 (712)
++.+|+.+.. ...+..+|..+++-...-+. ...-|+++.. +| .+|+.+. + +.+..||+ .+.+
T Consensus 148 ~~~~~vs~~~-----d~~V~v~D~~t~~~~~~i~~--g~~~~~v~~spdg~~l~v~~~-d-----~~V~v~D~~~~t~~- 213 (543)
T 1nir_A 148 PNLFSVTLRD-----AGQIALVDGDSKKIVKVIDT--GYAVHISRMSASGRYLLVIGR-D-----ARIDMIDLWAKEPT- 213 (543)
T ss_dssp GGEEEEEEGG-----GTEEEEEETTTCCEEEEEEC--STTEEEEEECTTSCEEEEEET-T-----SEEEEEETTSSSCE-
T ss_pred CCEEEEEEcC-----CCeEEEEECCCceEEEEEec--CcccceEEECCCCCEEEEECC-C-----CeEEEEECcCCCCc-
Confidence 5677877653 24688899988875432221 1124555443 44 5666542 2 67999999 5544
Q ss_pred EEcccCCccccceeEEEE-----CCE-EEEEcccCCCCccCceEEeeCCCCeeEEeCCC-----------CCCCcceEEE
Q psy14726 472 SLIAPMNVERSDASATTL-----QGK-IYITGGFNGHNCLNSCEVYDPECNQWTLIEPM-----------RHRRSGVSCI 534 (712)
Q Consensus 472 ~~~~~~p~~r~~~~~~~~-----~~~-iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-----------p~~r~~~~~~ 534 (712)
.+..++....-..++.- +|+ +|+.+ .. -+++.++|..+.+-...-+. |.+|....+.
T Consensus 214 -~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~-~~----~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~ 287 (543)
T 1nir_A 214 -KVAEIKIGIEARSVESSKFKGYEDRYTIAGA-YW----PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIA 287 (543)
T ss_dssp -EEEEEECCSEEEEEEECCSTTCTTTEEEEEE-EE----SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEE
T ss_pred -EEEEEecCCCcceEEeCCCcCCCCCEEEEEE-cc----CCeEEEEeccccccceeecccCcccCccccccCCceEEEEE
Confidence 33333333222233322 454 55543 22 25678889887653322111 1223222222
Q ss_pred EE-CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE-CCE-EEEEcccCCCceeeeEEEEECCCCe
Q psy14726 535 AY-HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DDM-IFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 535 ~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
.. ++.+|+.+.. ...++.+|..+.+-..+...+..+.-+.++.- +++ +|+.+.. .+.+.++|+++++
T Consensus 288 s~~~~~~~vs~~~-----~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~-----~~~v~v~D~~tg~ 357 (543)
T 1nir_A 288 SHEHPEFIVNVKE-----TGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANN-----SNKVAVIDSKDRR 357 (543)
T ss_dssp CSSSSEEEEEETT-----TTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGG-----GTEEEEEETTTTE
T ss_pred CCCCCEEEEEECC-----CCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecC-----CCeEEEEECCCCe
Confidence 23 3456655432 36788999876431111111222333333333 455 5544322 2368889999987
Q ss_pred EEE
Q psy14726 612 WYE 614 (712)
Q Consensus 612 W~~ 614 (712)
-..
T Consensus 358 l~~ 360 (543)
T 1nir_A 358 LSA 360 (543)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=94.37 E-value=1.4 Score=44.09 Aligned_cols=187 Identities=9% Similarity=0.048 Sum_probs=95.5
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA 475 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 475 (712)
++..++.|+.++ .+..++........................++..++.|+.+ ..+..||.....-....
T Consensus 97 dg~~l~s~~~d~-----~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d-----~~~~~~d~~~~~~~~~~ 166 (340)
T 4aow_A 97 DGQFALSGSWDG-----TLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD-----KTIKLWNTLGVCKYTVQ 166 (340)
T ss_dssp TSSEEEEEETTS-----EEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT-----SCEEEECTTSCEEEEEC
T ss_pred CCCEEEEEcccc-----cceEEeecccceeeeecCCCCceeEEEEeecCccceeecCC-----CeEEEEEeCCCceEEEE
Confidence 566777777543 57778887776654433333333333333455666666644 34666776554322221
Q ss_pred cCCccccceeEEEE----CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--CCEEEEEcCCCCC
Q psy14726 476 PMNVERSDASATTL----QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGM 549 (712)
Q Consensus 476 ~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~ 549 (712)
... .......+.+ .+.+++.||.+ ..+..||..+.+....-.-. .....++.+ ++.+++.|+.+
T Consensus 167 ~~~-~~~~v~~~~~~~~~~~~~~~s~~~d-----~~i~i~d~~~~~~~~~~~~h--~~~v~~~~~s~~~~~l~s~s~D-- 236 (340)
T 4aow_A 167 DES-HSEWVSCVRFSPNSSNPIIVSCGWD-----KLVKVWNLANCKLKTNHIGH--TGYLNTVTVSPDGSLCASGGKD-- 236 (340)
T ss_dssp SSS-CSSCEEEEEECSCSSSCEEEEEETT-----SCEEEEETTTTEEEEEECCC--SSCEEEEEECTTSSEEEEEETT--
T ss_pred ecc-ccCcccceEEccCCCCcEEEEEcCC-----CEEEEEECCCCceeeEecCC--CCcEEEEEECCCCCEEEEEeCC--
Confidence 111 1111122222 23466666655 35788898877643332111 112222222 56777788764
Q ss_pred CccceEEEEeCCCCcEEEcCCCCCCccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeE
Q psy14726 550 SRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEW 612 (712)
Q Consensus 550 ~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 612 (712)
..+..||..+.+-... +.....-.+++...+..++.||.++ .+.+||..+..-
T Consensus 237 ---g~i~iwd~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~d~-----~i~iwd~~~~~~ 289 (340)
T 4aow_A 237 ---GQAMLWDLNEGKHLYT--LDGGDIINALCFSPNRYWLCAATGP-----SIKIWDLEGKII 289 (340)
T ss_dssp ---CEEEEEETTTTEEEEE--EECSSCEEEEEECSSSSEEEEEETT-----EEEEEETTTTEE
T ss_pred ---CeEEEEEeccCceeee--ecCCceEEeeecCCCCceeeccCCC-----EEEEEECCCCeE
Confidence 4678888876543222 1111222233333444556666543 578888877653
|
| >1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A* | Back alignment and structure |
|---|
Probab=94.22 E-value=1 Score=47.58 Aligned_cols=173 Identities=14% Similarity=0.135 Sum_probs=98.8
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEe--CCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCc---
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEI--APMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQ--- 470 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~--~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--- 470 (712)
++.+|+|-| +..|+||..+++...- +.+| . --++...+|++|+|-| +..++||+.+++
T Consensus 158 ~~~~yfFkG-------~~yw~yd~~~~~~~~~~w~gi~--~-iDAA~~~~g~~YfFkG-------~~y~rfd~~~~~v~~ 220 (460)
T 1qhu_A 158 DEGILFFQG-------NRKWFWDLTTGTKKERSWPAVG--N-CTSALRWLGRYYCFQG-------NQFLRFNPVSGEVPP 220 (460)
T ss_dssp SSEEEEEET-------TEEEEEETTTTEEEEECCTTSC--C-CSEEEEETTEEEEEET-------TEEEEECTTTCCCCT
T ss_pred CCeEEEEec-------ccEEEEecccceeecccCCCCC--c-cchheeeCCceEEEEC-------CEEEEEcCccCcccC
Confidence 678899987 4689999988876532 2233 2 2345556799999988 567888876543
Q ss_pred ---------eEEcccCC------------------ccccceeEEE--ECCEEEEEcccCCCCccCceEEeeCCCCeeE--
Q psy14726 471 ---------WSLIAPMN------------------VERSDASATT--LQGKIYITGGFNGHNCLNSCEVYDPECNQWT-- 519 (712)
Q Consensus 471 ---------W~~~~~~p------------------~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~-- 519 (712)
|..++... .+....-++. .+|++|++-| +..|++|...+.+.
T Consensus 221 gyPk~is~~w~~c~~~g~~~~~~~st~~~~~p~~C~p~~~~DAi~~~~~G~tYFFKg-------~~yWR~~~~~~~~~p~ 293 (460)
T 1qhu_A 221 GYPLDVRDYFLSCPGRGHRSSHRNSTQHGHESTRCDPDLVLSAMVSDNHGATYVFSG-------SHYWRLDTNRDGWHSW 293 (460)
T ss_dssp TCCEEHHHHTSCCTTCCSCC-------CCCTTTTTCTTCCCCEEEECTTCCEEEEET-------TEEEECTTGGGCCCCE
T ss_pred CCCcchhhcccCCCCCCCccccccCCccccccccccCCCCcCEEEecCCCeEEEEeC-------CEEEEEecCCCCcCcc
Confidence 21111100 0111223333 3689999887 34666665543321
Q ss_pred Ee----CCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCC----------CCCC--ccceEEEE-
Q psy14726 520 LI----EPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPD----------MYNP--RSNFAIEV- 582 (712)
Q Consensus 520 ~~----~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~----------~p~~--r~~~~~~~- 582 (712)
.+ +.+|.. --++...++++|++=| +.+|+|+..+. .+.++. +|.. ...--+|.
T Consensus 294 ~Is~~WpglP~~--IDAAf~~~~~~yfFkG-------~~yw~f~~~~g-~~~~~GyPK~I~~~lGlp~~~~~~~IDAA~~ 363 (460)
T 1qhu_A 294 PIAHQWPQGPST--VDAAFSWEDKLYLIQD-------TKVYVFLTKGG-YTLVNGYPKRLEKELGSPPVISLEAVDAAFV 363 (460)
T ss_dssp EGGGTCTTSCSS--CSEEEEETTEEEEEET-------TEEEEEECSBS-CEECTTCCEEHHHHHCCCSSCCCSCCCEEEC
T ss_pred chhhhccCCCCC--CcEEEEECCeEEEEeC-------CEEEEEeCCCC-ceecCCCCeEHHHhccCCCccccCcccEEEE
Confidence 11 133332 3344456899999977 56888886531 222221 2221 11122333
Q ss_pred --ECCEEEEEcccCCCceeeeEEEEECCC
Q psy14726 583 --IDDMIFAIGGFNGVTTIYHVECYDEKT 609 (712)
Q Consensus 583 --~~~~i~v~GG~~~~~~~~~v~~yd~~~ 609 (712)
-++++|+|-| +..|.||...
T Consensus 364 ~~~~~ktyfFkG-------~~ywryd~~~ 385 (460)
T 1qhu_A 364 CPGSSRLHIMAG-------RRLWWLDLKS 385 (460)
T ss_dssp CTTCCEEEEEET-------TEEEEEEGGG
T ss_pred eCCCCEEEEEEC-------CEEEEEECCC
Confidence 2689999977 3678998764
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=94.21 E-value=0.94 Score=47.05 Aligned_cols=144 Identities=10% Similarity=0.153 Sum_probs=77.2
Q ss_pred CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEE
Q psy14726 443 HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTL 520 (712)
Q Consensus 443 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 520 (712)
+++.++.|+.+ ..+.+||..+.+-...-. .......++.+ ++..++.|+.+ ..+..||..+++...
T Consensus 134 dg~~l~s~~~d-----~~i~iwd~~~~~~~~~~~--~h~~~v~~~~~~p~~~~l~s~s~d-----~~v~iwd~~~~~~~~ 201 (393)
T 1erj_A 134 DGKFLATGAED-----RLIRIWDIENRKIVMILQ--GHEQDIYSLDYFPSGDKLVSGSGD-----RTVRIWDLRTGQCSL 201 (393)
T ss_dssp TSSEEEEEETT-----SCEEEEETTTTEEEEEEC--CCSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEE
T ss_pred CCCEEEEEcCC-----CeEEEEECCCCcEEEEEc--cCCCCEEEEEEcCCCCEEEEecCC-----CcEEEEECCCCeeEE
Confidence 57777887754 468899988775432211 11111122222 56666677655 468889998877543
Q ss_pred eCCCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCcEEEc-CCCC----CCccceEEEEE--CCEEEEEc
Q psy14726 521 IEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQV-PDMY----NPRSNFAIEVI--DDMIFAIG 591 (712)
Q Consensus 521 ~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~p----~~r~~~~~~~~--~~~i~v~G 591 (712)
.-.... ...+++.. ++.+++.|+.+ ..+..||..+..-... .... ........+.+ ++..++.|
T Consensus 202 ~~~~~~--~v~~~~~~~~~~~~l~~~s~d-----~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~ 274 (393)
T 1erj_A 202 TLSIED--GVTTVAVSPGDGKYIAAGSLD-----RAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSG 274 (393)
T ss_dssp EEECSS--CEEEEEECSTTCCEEEEEETT-----SCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEE
T ss_pred EEEcCC--CcEEEEEECCCCCEEEEEcCC-----CcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEE
Confidence 322211 11222222 56778888764 4678899887654322 1110 11111222233 67777888
Q ss_pred ccCCCceeeeEEEEECCCC
Q psy14726 592 GFNGVTTIYHVECYDEKTD 610 (712)
Q Consensus 592 G~~~~~~~~~v~~yd~~~~ 610 (712)
+.++ .+.+||..+.
T Consensus 275 s~d~-----~v~~wd~~~~ 288 (393)
T 1erj_A 275 SLDR-----SVKLWNLQNA 288 (393)
T ss_dssp ETTS-----EEEEEEC---
T ss_pred eCCC-----EEEEEECCCC
Confidence 8765 5777777653
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=94.16 E-value=1.9 Score=48.53 Aligned_cols=118 Identities=11% Similarity=0.169 Sum_probs=74.1
Q ss_pred EEEECCeEEEEcccCCCCCCceeEEeecCCCc--eEEcccCCcc--------ccceeEEEECCEEEEEcccCCCCccCce
Q psy14726 439 TAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQ--WSLIAPMNVE--------RSDASATTLQGKIYITGGFNGHNCLNSC 508 (712)
Q Consensus 439 ~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~--------r~~~~~~~~~~~iyv~GG~~~~~~~~~v 508 (712)
-++.++.||+.... ..++.+|..+.+ |+.-...+.. ....+.++.+++||+... -..+
T Consensus 73 P~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~------dg~l 140 (677)
T 1kb0_A 73 PVVVDGIMYVSASW------SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW------DGRL 140 (677)
T ss_dssp CEEETTEEEEECGG------GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT------TSEE
T ss_pred CEEECCEEEEECCC------CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC------CCEE
Confidence 35679999998652 568999988764 8765443211 122345567899998643 2469
Q ss_pred EEeeCCCCe--eEEeCC-CCC--CCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCc--EEEc
Q psy14726 509 EVYDPECNQ--WTLIEP-MRH--RRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKT--WSQV 568 (712)
Q Consensus 509 ~~yd~~~~~--W~~~~~-~p~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~ 568 (712)
.++|..|++ |+.-.. -+. .....+.++.++.+|+..+.........+..||..+.+ |+.-
T Consensus 141 ~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 141 IALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp EEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEec
Confidence 999998776 877543 111 11222334568888876543222234679999998764 8764
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=94.15 E-value=1.9 Score=44.19 Aligned_cols=243 Identities=6% Similarity=-0.147 Sum_probs=119.5
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEE-
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTA- 440 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~- 440 (712)
..++.+|..+++...+.... .... .+.+.. +++.++++..+ ..++.+|+.+++-..+...+.........
T Consensus 60 ~~l~~~d~~~g~~~~lt~~~--~~~~-~~~~~spdg~~l~~~~~~-----~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~ 131 (388)
T 3pe7_A 60 WNYYLLDLNTQVATQLTEGR--GDNT-FGGFLSPDDDALFYVKDG-----RNLMRVDLATLEENVVYQVPAEWVGYGTWV 131 (388)
T ss_dssp CEEEEEETTTCEEEECCCSS--CBCS-SSCEECTTSSEEEEEETT-----TEEEEEETTTCCEEEEEECCTTEEEEEEEE
T ss_pred ceEEEEeCCCCceEEeeeCC--CCCc-cceEEcCCCCEEEEEeCC-----CeEEEEECCCCcceeeeechhhccccccee
Confidence 46889999998887753221 1111 111222 45444444421 47899999998877665555443322222
Q ss_pred -EECCeEEEEcccC-----------------CCCCCceeEEeecCCCceEEcccCCccccceeEEEE-CCEEEEEcccCC
Q psy14726 441 -VHHDVIYAMGGYN-----------------GQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL-QGKIYITGGFNG 501 (712)
Q Consensus 441 -~~~~~iyv~GG~~-----------------~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~ 501 (712)
..+++.++.--.. .......++.+|+.+.+-..+..-+ ....+....- +++.+++.....
T Consensus 132 ~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~-~~~~~~~~sp~dg~~l~~~~~~~ 210 (388)
T 3pe7_A 132 ANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQEN-QWLGHPIYRPYDDSTVAFCHEGP 210 (388)
T ss_dssp ECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEES-SCEEEEEEETTEEEEEEEEECSC
T ss_pred ECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCC-ccccccEECCCCCCEEEEEEecC
Confidence 2344444321000 0112367999999988766554322 1222223333 455444333221
Q ss_pred -CCccCceEEeeCCCCeeEEeCCCCCCC-cceEEEEECCE-EEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCC----
Q psy14726 502 -HNCLNSCEVYDPECNQWTLIEPMRHRR-SGVSCIAYHEC-IYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNP---- 574 (712)
Q Consensus 502 -~~~~~~v~~yd~~~~~W~~~~~~p~~r-~~~~~~~~~~~-iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~---- 574 (712)
......++.+|..+.....+....... ..+....-+++ |+...... ......++.+|+.+.+-+.+...+..
T Consensus 211 ~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~-~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~ 289 (388)
T 3pe7_A 211 HDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLK-GSPDRFIYSADPETLENRQLTSMPACSHLM 289 (388)
T ss_dssp TTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEET-TCCCEEEEEECTTTCCEEEEEEECCEEEEE
T ss_pred CCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCC-CCCcceEEEEecCCCceEEEEcCCCceeee
Confidence 123468999999887776665432211 11112222554 54433221 11123599999999887666443320
Q ss_pred --ccceEEEEECCEEEEEc----ccCCCceeeeEEEEECCCCeEEEcc
Q psy14726 575 --RSNFAIEVIDDMIFAIG----GFNGVTTIYHVECYDEKTDEWYEAT 616 (712)
Q Consensus 575 --r~~~~~~~~~~~i~v~G----G~~~~~~~~~v~~yd~~~~~W~~~~ 616 (712)
..+.....-+..|++.. |+.. .....++++|+.+++-..+.
T Consensus 290 ~~~~~~~~spdg~~l~~~~~~~~~~~~-~~~~~i~~~d~~~~~~~~l~ 336 (388)
T 3pe7_A 290 SNYDGSLMVGDGSDAPVDVQDDSGYKI-ENDPFLYVFNMKNGTQHRVA 336 (388)
T ss_dssp ECTTSSEEEEEECCC-------------CCCCEEEEEETTTTEEEEEE
T ss_pred ecCCCCeEccCCCcceeEeeecccccc-CCCCEEEEEeccCCceEEec
Confidence 00011111123333321 1111 11247999999998876664
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=94.11 E-value=6.4 Score=44.34 Aligned_cols=240 Identities=9% Similarity=0.015 Sum_probs=122.6
Q ss_pred CceEEEEECCCCcEEEcccCCCCCCCcceEEEEECCEEEEEeecCCC--------CccceEEEEECCCCcE--EEeCCCC
Q psy14726 362 TDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGN--------EYYNSCRCFNAVTKVW--KEIAPMN 431 (712)
Q Consensus 362 ~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~--------~~~~~v~~yd~~~~~W--~~~~~~~ 431 (712)
...++.+|..+++..... .+..+. .+.+..|++-++++..... .....+++++..+..= ..+...+
T Consensus 154 ~~~i~v~dl~tg~~~~~~---~~~~k~-~~~~WsDg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~ 229 (693)
T 3iuj_A 154 WREIHLMDVESKQPLETP---LKDVKF-SGISWLGNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAI 229 (693)
T ss_dssp EEEEEEEETTTCSEEEEE---EEEEES-CCCEEETTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCS
T ss_pred eEEEEEEECCCCCCCccc---cCCcee-ccEEEeCCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecC
Confidence 356888999888876531 111111 1112225443334433321 2345688888876542 1222222
Q ss_pred C--CcceeEE-EEECCeEEEEcccCCCCCCceeEEeecCCC--ceEEcccCCccccceeEEEECCEEEEEcccCCCCccC
Q psy14726 432 F--KRCYVST-AVHHDVIYAMGGYNGQRRQNSVEKYNYTEN--QWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLN 506 (712)
Q Consensus 432 ~--~r~~~~~-~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~ 506 (712)
. +....+. ..-+|+..++....+ ...+.++.+|..+. .|..+.+-...... ....-++++|+....++ ...
T Consensus 230 ~~~~~~~~~~~~SpDg~~l~~~~~~~-~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~-~~~~~g~~l~~~t~~~~--~~~ 305 (693)
T 3iuj_A 230 PAQHHRYVGATVTEDDRFLLISAANS-TSGNRLYVKDLSQENAPLLTVQGDLDADVS-LVDNKGSTLYLLTNRDA--PNR 305 (693)
T ss_dssp GGGCCSEEEEEECTTSCEEEEEEESS-SSCCEEEEEETTSTTCCCEEEECSSSSCEE-EEEEETTEEEEEECTTC--TTC
T ss_pred CCCCeEEEEEEEcCCCCEEEEEEccC-CCCcEEEEEECCCCCCceEEEeCCCCceEE-EEeccCCEEEEEECCCC--CCC
Confidence 1 2222233 234555443332211 12368999998766 68777543222221 23345789999876543 245
Q ss_pred ceEEeeCCCC---eeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEE-
Q psy14726 507 SCEVYDPECN---QWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEV- 582 (712)
Q Consensus 507 ~v~~yd~~~~---~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~- 582 (712)
.+..+|..+. .|+.+.+-..... +....++.|++..-.++ ...++.+|........+. +|......+...
T Consensus 306 ~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g---~~~l~~~d~~g~~~~~l~-~p~~~~~~~~~~~ 379 (693)
T 3iuj_A 306 RLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDA---TARVEQFDYEGKRVREVA-LPGLGSVSGFNGK 379 (693)
T ss_dssp EEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETT---EEEEEEECTTSCEEEEEC-CSSSSEEEECCCC
T ss_pred EEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECC---eeEEEEEECCCCeeEEee-cCCCceEEeeecC
Confidence 7888888764 4887654332222 44555677766543221 357889998866555553 222211111111
Q ss_pred EC-CEEEEEcccCCCceeeeEEEEECCCCeEEEccC
Q psy14726 583 ID-DMIFAIGGFNGVTTIYHVECYDEKTDEWYEATD 617 (712)
Q Consensus 583 ~~-~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 617 (712)
-+ +.+++.. .+. ..-..++.||+.+++++.+..
T Consensus 380 ~d~~~l~~~~-ss~-~tP~~l~~~d~~~g~~~~l~~ 413 (693)
T 3iuj_A 380 HDDPALYFGF-ENY-AQPPTLYRFEPKSGAISLYRA 413 (693)
T ss_dssp TTCSCEEEEE-ECS-SSCCEEEEECTTTCCEEEEEC
T ss_pred CCCCEEEEEe-cCC-CCCCEEEEEECCCCeEEEEEe
Confidence 12 3344332 111 122468999999888877643
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=94.10 E-value=5.1 Score=39.71 Aligned_cols=203 Identities=4% Similarity=-0.033 Sum_probs=107.5
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV 441 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~ 441 (712)
..|..+|+....-.... . +..-+++++. ++.+|+...... ...++.+|+.+++...+...+..+.....+.
T Consensus 53 ~~I~~~d~~g~~~~~~~---~--~~~p~gia~~~dG~l~vad~~~~---~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~ 124 (306)
T 2p4o_A 53 GEIVSITPDGNQQIHAT---V--EGKVSGLAFTSNGDLVATGWNAD---SIPVVSLVKSDGTVETLLTLPDAIFLNGITP 124 (306)
T ss_dssp TEEEEECTTCCEEEEEE---C--SSEEEEEEECTTSCEEEEEECTT---SCEEEEEECTTSCEEEEEECTTCSCEEEEEE
T ss_pred CeEEEECCCCceEEEEe---C--CCCceeEEEcCCCcEEEEeccCC---cceEEEEcCCCCeEEEEEeCCCccccCcccc
Confidence 45788888764322211 1 1233455554 677888764211 1258899999998877766655555555554
Q ss_pred E-CCeEEEEcccCCCCCCceeEEeecCCCc---eEEccc----CCcc--ccceeEEEECCEEEEEcccCCCCccCceEEe
Q psy14726 442 H-HDVIYAMGGYNGQRRQNSVEKYNYTENQ---WSLIAP----MNVE--RSDASATTLQGKIYITGGFNGHNCLNSCEVY 511 (712)
Q Consensus 442 ~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~---W~~~~~----~p~~--r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~y 511 (712)
. ++.+|+.-. ....++++|+.+.+ |..-+. .+.. ....+...-++.+|+.-- ..+.+++|
T Consensus 125 ~~~~~~~v~d~-----~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~-----~~~~I~~~ 194 (306)
T 2p4o_A 125 LSDTQYLTADS-----YRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNT-----EKMLLLRI 194 (306)
T ss_dssp SSSSEEEEEET-----TTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEET-----TTTEEEEE
T ss_pred cCCCcEEEEEC-----CCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEEEEeC-----CCCEEEEE
Confidence 3 456777532 12579999987642 311111 1111 111223223567998753 23578999
Q ss_pred eCCC-Ce---eEEeCCCCCCCcceEEEE-ECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEEC--
Q psy14726 512 DPEC-NQ---WTLIEPMRHRRSGVSCIA-YHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVID-- 584 (712)
Q Consensus 512 d~~~-~~---W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~-- 584 (712)
|... .+ .+.......|+ ++++ -+|.||+.-.. .+.|.+||+. .+...+...+.+-.....+.++
T Consensus 195 ~~~~~g~~~~~~~~~~~~~P~---gi~vd~dG~l~va~~~-----~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~ 265 (306)
T 2p4o_A 195 PVDSTDKPGEPEIFVEQTNID---DFAFDVEGNLYGATHI-----YNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQT 265 (306)
T ss_dssp EBCTTSCBCCCEEEEESCCCS---SEEEBTTCCEEEECBT-----TCCEEEECTT-CCEEEEECGGGTCTTEEEEEECCS
T ss_pred EeCCCCCCCccEEEeccCCCC---CeEECCCCCEEEEeCC-----CCeEEEECCC-CCEEEEeecccccCCceEEEEecc
Confidence 8764 22 12222222221 2222 26789888542 3578999986 5544432222232233444443
Q ss_pred ----CEEEEEcc
Q psy14726 585 ----DMIFAIGG 592 (712)
Q Consensus 585 ----~~i~v~GG 592 (712)
+.|||...
T Consensus 266 ~~d~~~LyVt~~ 277 (306)
T 2p4o_A 266 EGDCTAIYVVTN 277 (306)
T ss_dssp TTTTTEEEEEEC
T ss_pred cCCCCEEEEECC
Confidence 57888744
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.08 E-value=0.57 Score=48.34 Aligned_cols=148 Identities=6% Similarity=0.102 Sum_probs=75.9
Q ss_pred CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEE
Q psy14726 443 HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTL 520 (712)
Q Consensus 443 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 520 (712)
++.+++.|+.+ ..+..||..+.+-...-..+........... ++.+++.|+.++ .+..||..+.+-..
T Consensus 111 ~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~v~~~d~~~~~~~~ 180 (408)
T 4a11_B 111 DTGMFTSSSFD-----KTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGP-----KVQLCDLKSGSCSH 180 (408)
T ss_dssp CTTCEEEEETT-----SEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSS-----SEEEEESSSSCCCE
T ss_pred CCcEEEEEeCC-----CeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCC-----eEEEEeCCCcceee
Confidence 45577777643 4688999888765444332222111111111 344777776553 58888887664321
Q ss_pred eCCCCCCCcceEEEEE--CCE-EEEEcCCCCCCccceEEEEeCCCCc--EEEcCC------------CCCCccceEEEEE
Q psy14726 521 IEPMRHRRSGVSCIAY--HEC-IYVIGGFNGMSRMCNGEKYNPVTKT--WSQVPD------------MYNPRSNFAIEVI 583 (712)
Q Consensus 521 ~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~------------~p~~r~~~~~~~~ 583 (712)
. +........++.+ ++. +++.|+.+ ..+..||..+.. ...+.. ..........+.+
T Consensus 181 ~--~~~~~~~v~~~~~~~~~~~ll~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 253 (408)
T 4a11_B 181 I--LQGHRQEILAVSWSPRYDYILATASAD-----SRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCF 253 (408)
T ss_dssp E--ECCCCSCEEEEEECSSCTTEEEEEETT-----SCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEE
T ss_pred e--ecCCCCcEEEEEECCCCCcEEEEEcCC-----CcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEE
Confidence 1 1111122222222 333 77777754 457888886542 222110 0111112222233
Q ss_pred --CCEEEEEcccCCCceeeeEEEEECCCCeE
Q psy14726 584 --DDMIFAIGGFNGVTTIYHVECYDEKTDEW 612 (712)
Q Consensus 584 --~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 612 (712)
++..++.|+.++ .+.+||..+++-
T Consensus 254 ~~~~~~l~~~~~dg-----~i~vwd~~~~~~ 279 (408)
T 4a11_B 254 TSDGLHLLTVGTDN-----RMRLWNSSNGEN 279 (408)
T ss_dssp CTTSSEEEEEETTS-----CEEEEETTTCCB
T ss_pred cCCCCEEEEecCCC-----eEEEEECCCCcc
Confidence 667777887665 578899887653
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=94.06 E-value=2.8 Score=50.87 Aligned_cols=216 Identities=6% Similarity=-0.018 Sum_probs=108.5
Q ss_pred eEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEE
Q psy14726 364 FVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH 442 (712)
Q Consensus 364 ~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~ 442 (712)
.+..||..+++-... .... ...-.++++. ++..++.||.+ ..+..+|..+++....-..... .-.+++..
T Consensus 638 ~i~vw~~~~~~~~~~--~~~h-~~~v~~~~~s~~~~~l~s~~~d-----~~v~vwd~~~~~~~~~~~~~~~-~v~~~~~~ 708 (1249)
T 3sfz_A 638 TLQVFKAETGEKLLD--IKAH-EDEVLCCAFSSDDSYIATCSAD-----KKVKIWDSATGKLVHTYDEHSE-QVNCCHFT 708 (1249)
T ss_dssp CEEEEETTTCCEEEE--ECCC-SSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCEEEEEECCSS-CEEEEEEC
T ss_pred eEEEEECCCCCEEEE--eccC-CCCEEEEEEecCCCEEEEEeCC-----CeEEEEECCCCceEEEEcCCCC-cEEEEEEe
Confidence 578889887765431 1111 1111223333 66677777743 3589999988775432111111 11222222
Q ss_pred ---CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCe
Q psy14726 443 ---HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQ 517 (712)
Q Consensus 443 ---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 517 (712)
++.+++.|+.+ ..+..||..+.+....-. .......++.+ ++..++.|+.++ .+..||..+..
T Consensus 709 ~~~~~~~l~sg~~d-----~~v~vwd~~~~~~~~~~~--~h~~~v~~~~~sp~~~~l~s~s~dg-----~v~vwd~~~~~ 776 (1249)
T 3sfz_A 709 NKSNHLLLATGSND-----FFLKLWDLNQKECRNTMF--GHTNSVNHCRFSPDDELLASCSADG-----TLRLWDVRSAN 776 (1249)
T ss_dssp SSSSCCEEEEEETT-----SCEEEEETTSSSEEEEEC--CCSSCEEEEEECSSTTEEEEEESSS-----EEEEEEGGGTE
T ss_pred cCCCceEEEEEeCC-----CeEEEEECCCcchhheec--CCCCCEEEEEEecCCCEEEEEECCC-----eEEEEeCCCCc
Confidence 33466666643 458889988776432211 11111222222 666777777653 57778877665
Q ss_pred eEEeCCCCC------------C-CcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEE-E
Q psy14726 518 WTLIEPMRH------------R-RSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEV-I 583 (712)
Q Consensus 518 W~~~~~~p~------------~-r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~ 583 (712)
-...-..+. . .....+..-++..+++++ ...+..||..+..............-.+++. -
T Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~------~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp 850 (1249)
T 3sfz_A 777 ERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA------KNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSP 850 (1249)
T ss_dssp EEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE------TTEEEEEETTTCCEEEEEECSSSSCCCEEEECS
T ss_pred ccceecccccccccCCccccccceEEEEEECCCCCEEEEEc------CCcEEEEEecCCCceeEEcCCCCCceEEEEEcC
Confidence 322211100 0 001111112455555554 2578899988776544321111111122222 2
Q ss_pred CCEEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 584 DDMIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 584 ~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
++.++++|+.++ .+.+||..+..
T Consensus 851 ~~~~l~~~~~dg-----~v~vwd~~~~~ 873 (1249)
T 3sfz_A 851 YDHLAVIALSQY-----CVELWNIDSRL 873 (1249)
T ss_dssp STTEEEEECSSS-----CEEEEETTTTE
T ss_pred CCCEEEEEeCCC-----eEEEEEcCCCc
Confidence 677777777655 57788887754
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=94.06 E-value=1.9 Score=47.43 Aligned_cols=191 Identities=9% Similarity=-0.037 Sum_probs=103.4
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA 475 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 475 (712)
++.++++.+..+ .+..||..+++...+...+. ......-+|+..++++.... ....++++|+.+.++..+.
T Consensus 121 g~~~~~~s~~~~-----~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~-~~~~i~~~d~~~g~~~~l~ 191 (582)
T 3o4h_A 121 GEAVVFTGATED-----RVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGG-GRVSLFTSNLSSGGLRVFD 191 (582)
T ss_dssp SSCEEEEEECSS-----CEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEET-TEEEEEEEETTTCCCEEEC
T ss_pred CCeEEEEecCCC-----CceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCC-CCeEEEEEcCCCCCceEee
Confidence 445555555322 23477988888777654333 22334457776666554322 1245999999999988774
Q ss_pred cCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceE-------EEEECCEEEEEcCC
Q psy14726 476 PMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVS-------CIAYHECIYVIGGF 546 (712)
Q Consensus 476 ~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~-------~~~~~~~iyv~GG~ 546 (712)
.-+.. ...... +|+.++.+..++ ...++.+|.++++...+........... ...-++++|+.+..
T Consensus 192 ~~~~~---~~~~~~SpDG~~l~~~~~~~---~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~ 265 (582)
T 3o4h_A 192 SGEGS---FSSASISPGMKVTAGLETAR---EARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARR 265 (582)
T ss_dssp CSSCE---EEEEEECTTSCEEEEEECSS---CEEEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEE
T ss_pred cCCCc---cccceECCCCCEEEEccCCC---eeEEEEEcCCCCcEEEccCCCcChhhhhhccccceeEcCCCcEEEEEEc
Confidence 33211 122222 666554443332 2579999999988873322111111111 02336677777654
Q ss_pred CCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeEEEc
Q psy14726 547 NGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 547 ~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
+ ..+..|+. ++... .+... ..+++..++++++.++.... ...++.+|..+ +...+
T Consensus 266 ~-----g~~~l~~~--g~~~~---~~~~~-v~~~~~sdg~~l~~~s~~~~--p~~l~~~d~~~-~~~~l 320 (582)
T 3o4h_A 266 E-----GRSAVFID--GERVE---APQGN-HGRVVLWRGKLVTSHTSLST--PPRIVSLPSGE-PLLEG 320 (582)
T ss_dssp T-----TEEEEEET--TEEEC---CCSSE-EEEEEEETTEEEEEEEETTE--EEEEEEETTCC-EEECC
T ss_pred C-----CcEEEEEE--CCeec---cCCCc-eEEEEecCCEEEEEEcCCCC--CCeEEEEcCCC-ceEEE
Confidence 3 35667776 44433 22221 12233238888877665432 34688888775 55444
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.05 E-value=3.9 Score=40.15 Aligned_cols=222 Identities=9% Similarity=0.081 Sum_probs=104.3
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV 441 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~ 441 (712)
+.|..+|..+++....-..... ...-.+++.. ++..++.|+.+ ..+..+|..+++-........ .......
T Consensus 45 ~tV~iWd~~tg~~~~~~~~~~~-~~~V~~v~~~~~~~~l~sgs~D-----g~v~iw~~~~~~~~~~~~~h~--~~~~~~~ 116 (318)
T 4ggc_A 45 NSVYLWSASSGDILQLLQMEQP-GEYISSVAWIKEGNYLAVGTSS-----AEVQLWDVQQQKRLRNMTSHS--ARVGSLS 116 (318)
T ss_dssp TEEEEEETTTCCEEEEEECCST-TCCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEEEECCS--SCEEEEE
T ss_pred CEEEEEECCCCCEEEEEEecCC-CCeEEEEEECCCCCEEEEEECC-----CcEEEeecCCceeEEEecCcc--ceEEEee
Confidence 4688999998876653111111 1112233333 66777888854 368889998887543322222 2223344
Q ss_pred ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEE--ECCEEEEEcccCCCCccCceEEeeCCCCeeE
Q psy14726 442 HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATT--LQGKIYITGGFNGHNCLNSCEVYDPECNQWT 519 (712)
Q Consensus 442 ~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 519 (712)
.++.+.+.|+.. ..+..++..+....... +........... .+++.++.|+.++ .+..||..+.+-.
T Consensus 117 ~~~~~l~s~~~~-----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~~~~~ 185 (318)
T 4ggc_A 117 WNSYILSSGSRS-----GHIHHHDVRVAEHHVAT-LSGHSQEVCGLRWAPDGRHLASGGNDN-----LVNVWPSAPGEGG 185 (318)
T ss_dssp EETTEEEEEETT-----SEEEEEETTSSSCEEEE-EECCSSCEEEEEECTTSSEEEEEETTS-----CEEEEESSCBTTB
T ss_pred cCCCEEEEEecC-----CceEeeecCCCceeEEE-EcCccCceEEEEEcCCCCEEEEEecCc-----ceeEEECCCCccc
Confidence 556666666643 23444554443322111 111111111112 2566667776653 4777887664311
Q ss_pred --EeCCCCCCCcc-eEEEEE--C-CEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEECCEEEEEccc
Q psy14726 520 --LIEPMRHRRSG-VSCIAY--H-ECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGF 593 (712)
Q Consensus 520 --~~~~~p~~r~~-~~~~~~--~-~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~ 593 (712)
........... .+.+.. + ..+++.+|.. ...+..+|..+..-.........-........++.+++.+|.
T Consensus 186 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~----~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~ 261 (318)
T 4ggc_A 186 WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTS----DRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGF 261 (318)
T ss_dssp SCCSEEECCCCSCEEEEEECTTSTTEEEEEECTT----TCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECT
T ss_pred ccceeeecccCCceEEEEecCCCCcEEEEEecCC----CCEEEEEecccccccccccceeeeeeeeecccccceEEEEEc
Confidence 11111111111 112222 2 2344444432 346778888776554443222221111111225566666554
Q ss_pred CCCceeeeEEEEECCCCe
Q psy14726 594 NGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 594 ~~~~~~~~v~~yd~~~~~ 611 (712)
.. ..+.+||..+.+
T Consensus 262 ~d----~~i~iwd~~~~~ 275 (318)
T 4ggc_A 262 AQ----NQLVIWKYPTMA 275 (318)
T ss_dssp TT----CCEEEEETTTCC
T ss_pred CC----CEEEEEECCCCc
Confidence 32 257888987654
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=94.04 E-value=1.8 Score=44.54 Aligned_cols=184 Identities=11% Similarity=0.165 Sum_probs=95.6
Q ss_pred EEEEEeecCCCCccceEEEEECCCCcEEEeC--CCCCCcc--eeEEEE--ECCeEEEEcccCCCCCCceeEEeecCCCc-
Q psy14726 398 NIYVIGGFDGNEYYNSCRCFNAVTKVWKEIA--PMNFKRC--YVSTAV--HHDVIYAMGGYNGQRRQNSVEKYNYTENQ- 470 (712)
Q Consensus 398 ~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~~~~r~--~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~- 470 (712)
..++.|+.+ ..+..||..+++-...- ..+.... -.+++. .++.+++.||.+ ..+..||+....
T Consensus 171 ~~l~s~s~D-----~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D-----~~v~~wd~~~~~~ 240 (380)
T 3iz6_a 171 TRLITGSGD-----QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCD-----TTVRLWDLRITSR 240 (380)
T ss_dssp SCEEEECTT-----SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETT-----SCEEEEETTTTCC
T ss_pred CEEEEECCC-----CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECC-----CeEEEEECCCCCc
Confidence 345555533 35888999887754332 1111111 122222 266888888865 458888876321
Q ss_pred -eEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCC-------CCcceEEEEECCEE
Q psy14726 471 -WSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRH-------RRSGVSCIAYHECI 540 (712)
Q Consensus 471 -W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~-------~r~~~~~~~~~~~i 540 (712)
-..+.. -...-.++.+ ++..++.|+.++ .+..||..++.-...-.... +.....+...++.+
T Consensus 241 ~~~~~~~---h~~~v~~v~~~p~~~~l~s~s~D~-----~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~ 312 (380)
T 3iz6_a 241 AVRTYHG---HEGDINSVKFFPDGQRFGTGSDDG-----TCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRL 312 (380)
T ss_dssp CCEEECC---CSSCCCEEEECTTSSEEEEECSSS-----CEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSE
T ss_pred ceEEECC---cCCCeEEEEEecCCCeEEEEcCCC-----eEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCE
Confidence 111111 0111122233 677888888664 58888988876433211111 11112222336777
Q ss_pred EEEcCCCCCCccceEEEEeCCCCcEEE-cCCCCCC---ccceEEEEECCEEEEEcccCCCceeeeEEEEECCC
Q psy14726 541 YVIGGFNGMSRMCNGEKYNPVTKTWSQ-VPDMYNP---RSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKT 609 (712)
Q Consensus 541 yv~GG~~~~~~~~~v~~yd~~~~~W~~-~~~~p~~---r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~ 609 (712)
++.|+.+ ..+..||..+.+-.. +..+... +...-+..-++..++.||.++ .+.+||...
T Consensus 313 l~~g~~d-----g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~-----~i~iW~~~~ 375 (380)
T 3iz6_a 313 LFAGYSN-----GDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDK-----NLKIWAFSG 375 (380)
T ss_dssp EEEECTT-----SCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTS-----CEEEEECCS
T ss_pred EEEEECC-----CCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCC-----CEEEEecCC
Confidence 7777654 468899987765432 2222111 111112222778888898876 456666654
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.01 E-value=0.68 Score=46.74 Aligned_cols=186 Identities=12% Similarity=0.135 Sum_probs=94.5
Q ss_pred EEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEEC----CeEEEEcccCCCCCCceeEEeecCCCc--e
Q psy14726 398 NIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHH----DVIYAMGGYNGQRRQNSVEKYNYTENQ--W 471 (712)
Q Consensus 398 ~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~----~~iyv~GG~~~~~~~~~v~~yd~~~~~--W 471 (712)
.+++.|+... ....+..||..+++............-.+++... +.+++.|+.+ ..+..||..+.+ -
T Consensus 32 ~l~~~~s~~~--~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~ 104 (357)
T 3i2n_A 32 KFVTMGNFAR--GTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFG-----GNLHIWNLEAPEMPV 104 (357)
T ss_dssp EEEEEEC--C--CCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETT-----SCEEEECTTSCSSCS
T ss_pred eEEEecCccC--CCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCC-----CeEEEEeCCCCCccE
Confidence 5666665311 1246888898888765443222222222333322 4777777654 458888887664 1
Q ss_pred EEcccCCccccceeEE-------EECCEEEEEcccCCCCccCceEEeeCCCCe--eEEeCCCCC--CCcceEEE-----E
Q psy14726 472 SLIAPMNVERSDASAT-------TLQGKIYITGGFNGHNCLNSCEVYDPECNQ--WTLIEPMRH--RRSGVSCI-----A 535 (712)
Q Consensus 472 ~~~~~~p~~r~~~~~~-------~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~--~r~~~~~~-----~ 535 (712)
..+...... -.++. .-++..++.|+.++ .+..||..+.. ...+..... .+.-.+++ .
T Consensus 105 ~~~~~~~~~--v~~~~~~~~~~~s~~~~~l~~~~~d~-----~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 177 (357)
T 3i2n_A 105 YSVKGHKEI--INAIDGIGGLGIGEGAPEIVTGSRDG-----TVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYN 177 (357)
T ss_dssp EEECCCSSC--EEEEEEESGGGCC-CCCEEEEEETTS-----CEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC
T ss_pred EEEEecccc--eEEEeeccccccCCCccEEEEEeCCC-----eEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccC
Confidence 122111110 01111 12566777777653 57888887764 344432221 11222222 1
Q ss_pred ECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE----CCEEEEEcccCCCceeeeEEEEECCC
Q psy14726 536 YHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI----DDMIFAIGGFNGVTTIYHVECYDEKT 609 (712)
Q Consensus 536 ~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~----~~~i~v~GG~~~~~~~~~v~~yd~~~ 609 (712)
-++.+++.|+.+ ..+..||..+.+-....... ..-.+++.. ++..+++|+.++ .+.+||..+
T Consensus 178 ~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~ 243 (357)
T 3i2n_A 178 QEERVVCAGYDN-----GDIKLFDLRNMALRWETNIK--NGVCSLEFDRKDISMNKLVATSLEG-----KFHVFDMRT 243 (357)
T ss_dssp -CCCEEEEEETT-----SEEEEEETTTTEEEEEEECS--SCEEEEEESCSSSSCCEEEEEESTT-----EEEEEEEEE
T ss_pred CCCCEEEEEccC-----CeEEEEECccCceeeecCCC--CceEEEEcCCCCCCCCEEEEECCCC-----eEEEEeCcC
Confidence 366777777653 57889999887643332221 122233333 567777777665 456666544
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=94.00 E-value=6 Score=44.57 Aligned_cols=209 Identities=11% Similarity=0.003 Sum_probs=112.2
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCC--------CCCceeEEeecC
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQ--------RRQNSVEKYNYT 467 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~--------~~~~~v~~yd~~ 467 (712)
+++.++++-..++.....++.+|..+++..... .+..+....... +|+-++++..... .....+++++..
T Consensus 139 Dg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lg 216 (693)
T 3iuj_A 139 DGRILAYSLSLAGSDWREIHLMDVESKQPLETP-LKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLG 216 (693)
T ss_dssp TSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE-EEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETT
T ss_pred CCCEEEEEEecCCCceEEEEEEECCCCCCCccc-cCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECC
Confidence 666666654433334467999999999876541 111111222334 6654444332221 345678888877
Q ss_pred CCce--EEcccCCc--cccceeEE-EECCEEEEEcccCCCCccCceEEeeCCCC--eeEEeCCCCCCCcceEEEEECCEE
Q psy14726 468 ENQW--SLIAPMNV--ERSDASAT-TLQGKIYITGGFNGHNCLNSCEVYDPECN--QWTLIEPMRHRRSGVSCIAYHECI 540 (712)
Q Consensus 468 ~~~W--~~~~~~p~--~r~~~~~~-~~~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~r~~~~~~~~~~~i 540 (712)
+..= ..+-..+. +....++. .-+++..++....+ ...+.++.+|..+. .|..+..-...... .....+++|
T Consensus 217 t~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~-~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~-~~~~~g~~l 294 (693)
T 3iuj_A 217 TAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANS-TSGNRLYVKDLSQENAPLLTVQGDLDADVS-LVDNKGSTL 294 (693)
T ss_dssp SCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESS-SSCCEEEEEETTSTTCCCEEEECSSSSCEE-EEEEETTEE
T ss_pred CCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccC-CCCcEEEEEECCCCCCceEEEeCCCCceEE-EEeccCCEE
Confidence 7642 12222221 11112222 22555333332221 12368999998765 68777542222222 234457899
Q ss_pred EEEcCCCCCCccceEEEEeCCCC---cEEEcCCCCCCccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeEEEc
Q psy14726 541 YVIGGFNGMSRMCNGEKYNPVTK---TWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 541 yv~GG~~~~~~~~~v~~yd~~~~---~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
|+....+. ....++.+|+.+. .|+.+.+-.... . +....++.|++..-.++ ...++++|+.++....+
T Consensus 295 ~~~t~~~~--~~~~l~~~d~~~~~~~~~~~l~~~~~~~-~-~~s~~g~~lv~~~~~~g---~~~l~~~d~~g~~~~~l 365 (693)
T 3iuj_A 295 YLLTNRDA--PNRRLVTVDAANPGPAHWRDLIPERQQV-L-TVHSGSGYLFAEYMVDA---TARVEQFDYEGKRVREV 365 (693)
T ss_dssp EEEECTTC--TTCEEEEEETTSCCGGGCEEEECCCSSC-E-EEEEETTEEEEEEEETT---EEEEEEECTTSCEEEEE
T ss_pred EEEECCCC--CCCEEEEEeCCCCCccccEEEecCCCCE-E-EEEEECCEEEEEEEECC---eeEEEEEECCCCeeEEe
Confidence 99876432 2467899998763 488764322222 2 55555777776644433 34689999887665554
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=93.96 E-value=0.45 Score=57.96 Aligned_cols=186 Identities=9% Similarity=0.059 Sum_probs=95.7
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA 475 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 475 (712)
++..++.||.+ ..+..||..+++........ ..-.+++...+..++.|+.+ ..+..||..+.+-...-
T Consensus 1014 dg~~l~s~~~d-----g~i~vwd~~~~~~~~~~~~~--~~v~~~~~~~~~~l~~~~~d-----g~v~vwd~~~~~~~~~~ 1081 (1249)
T 3sfz_A 1014 DGKTLISSSED-----SVIQVWNWQTGDYVFLQAHQ--ETVKDFRLLQDSRLLSWSFD-----GTVKVWNVITGRIERDF 1081 (1249)
T ss_dssp SSSCEEEECSS-----SBEEEEETTTTEEECCBCCS--SCEEEEEECSSSEEEEEESS-----SEEEEEETTTTCCCEEE
T ss_pred CCCEEEEEcCC-----CEEEEEECCCCceEEEecCC--CcEEEEEEcCCCcEEEEECC-----CcEEEEECCCCceeEEE
Confidence 56666777643 35889999998876543222 22233344444445555543 46888998876532221
Q ss_pred cCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--CCEEEEEcCCCCCCccc
Q psy14726 476 PMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMC 553 (712)
Q Consensus 476 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~ 553 (712)
..........+..-+++.++.|+.++ .+..||..+.+ .+..+........++.+ ++++++.|+.+ .
T Consensus 1082 ~~~~~~v~~~~~s~d~~~l~s~s~d~-----~v~iwd~~~~~--~~~~l~~h~~~v~~~~~s~dg~~lat~~~d-----g 1149 (1249)
T 3sfz_A 1082 TCHQGTVLSCAISSDATKFSSTSADK-----TAKIWSFDLLS--PLHELKGHNGCVRCSAFSLDGILLATGDDN-----G 1149 (1249)
T ss_dssp ECCSSCCCCEEECSSSSSCEEECCSS-----CCCEECSSSSS--CSBCCCCCSSCEEEEEECSSSSEEEEEETT-----S
T ss_pred cccCCcEEEEEECCCCCEEEEEcCCC-----cEEEEECCCcc--eeeeeccCCCcEEEEEECCCCCEEEEEeCC-----C
Confidence 11111122222223677777777654 46677766553 22222222222223333 67777888754 3
Q ss_pred eEEEEeCCCCcEEEcC-CC------CCCcc-ceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCeE
Q psy14726 554 NGEKYNPVTKTWSQVP-DM------YNPRS-NFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEW 612 (712)
Q Consensus 554 ~v~~yd~~~~~W~~~~-~~------p~~r~-~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 612 (712)
.+..||..+.+..... +. ..... -.+++.. +++.++.|| ..+.+||..+++.
T Consensus 1150 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~-------g~v~vwd~~~g~~ 1210 (1249)
T 3sfz_A 1150 EIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAG-------GYLKWWNVATGDS 1210 (1249)
T ss_dssp CCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEES-------SSEEEBCSSSCBC
T ss_pred EEEEEECCCCceEEEeccccccccccccCceEEEEEECCCCCEEEECC-------CeEEEEECCCCce
Confidence 4678888765432211 10 00111 1122222 566666655 2578899887654
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=93.94 E-value=3.2 Score=41.08 Aligned_cols=189 Identities=13% Similarity=0.169 Sum_probs=94.3
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCC--cEEEeCCCCCCcce-eEEEEE---CCeEEEEcccCCCCCCceeEEeecCCC
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTK--VWKEIAPMNFKRCY-VSTAVH---HDVIYAMGGYNGQRRQNSVEKYNYTEN 469 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~~~~r~~-~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~ 469 (712)
++.+++.|+.+ ..+..||..++ .+.....+...... .+++.. ++.+++.|+.+ ..+.+||..+.
T Consensus 22 ~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~d-----g~v~vwd~~~~ 91 (351)
T 3f3f_A 22 YGRHVATCSSD-----QHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYD-----KTVKLWEEDPD 91 (351)
T ss_dssp SSSEEEEEETT-----SEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETT-----SCEEEEEECTT
T ss_pred CCCEEEEeeCC-----CeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCC-----CeEEEEecCCC
Confidence 45566666643 35677776643 44443333222222 233333 37778888754 35778887654
Q ss_pred -------ceEEcccCCccccceeEEEE--C--CEEEEEcccCCCCccCceEEeeCCCCe----eEEeC---CC--C--CC
Q psy14726 470 -------QWSLIAPMNVERSDASATTL--Q--GKIYITGGFNGHNCLNSCEVYDPECNQ----WTLIE---PM--R--HR 527 (712)
Q Consensus 470 -------~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~v~~yd~~~~~----W~~~~---~~--p--~~ 527 (712)
.|..+..+.........+.+ + +.+++.|+.++ .+..||..+.+ |.... .+ . ..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg-----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (351)
T 3f3f_A 92 QEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDG-----ILRLYDALEPSDLRSWTLTSEMKVLSIPPANH 166 (351)
T ss_dssp SCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTC-----EEEEEECSSTTCTTCCEEEEEEESCSCCCSSC
T ss_pred cccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCC-----cEEEecCCChHHhccccccccccccccccCCc
Confidence 34444433322222333333 3 66777777653 57888876553 32211 11 1 11
Q ss_pred CcceEEEEE-----CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceE-EEEE-CC----EEEEEcccCCC
Q psy14726 528 RSGVSCIAY-----HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFA-IEVI-DD----MIFAIGGFNGV 596 (712)
Q Consensus 528 r~~~~~~~~-----~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~-~~~~-~~----~i~v~GG~~~~ 596 (712)
.....++.. ++..++.|+.+ ..+..++........+..+........ ++.. ++ .+++.|+.++
T Consensus 167 ~~~~~~~~~~p~~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg- 240 (351)
T 3f3f_A 167 LQSDFCLSWCPSRFSPEKLAVSALE-----QAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDG- 240 (351)
T ss_dssp SCCCEEEEECCCSSSCCEEEEEETT-----EEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTS-
T ss_pred ccceeEEEeccCCCCCcEEEEecCC-----CcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCC-
Confidence 111122222 25667777653 344555666666655444333222222 3333 33 7888888766
Q ss_pred ceeeeEEEEECCC
Q psy14726 597 TTIYHVECYDEKT 609 (712)
Q Consensus 597 ~~~~~v~~yd~~~ 609 (712)
.+.+||..+
T Consensus 241 ----~i~iwd~~~ 249 (351)
T 3f3f_A 241 ----RIRIFKITE 249 (351)
T ss_dssp ----CEEEEEEEE
T ss_pred ----eEEEEeCCC
Confidence 355565544
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=93.90 E-value=2.7 Score=47.46 Aligned_cols=118 Identities=14% Similarity=0.218 Sum_probs=73.3
Q ss_pred EEEECCeEEEEcccCCCCCCceeEEeecCCCc--eEEcccCCcc--------ccceeEEEECCEEEEEcccCCCCccCce
Q psy14726 439 TAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQ--WSLIAPMNVE--------RSDASATTLQGKIYITGGFNGHNCLNSC 508 (712)
Q Consensus 439 ~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~--------r~~~~~~~~~~~iyv~GG~~~~~~~~~v 508 (712)
-++.++.||+.+.. ..++.+|..|.+ |+.-...+.. ....+.++.+++||+... + ..+
T Consensus 66 P~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~-d-----g~l 133 (689)
T 1yiq_A 66 PIVVDGVMYTTGPF------SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL-D-----GRL 133 (689)
T ss_dssp CEEETTEEEEECGG------GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-T-----SEE
T ss_pred CEEECCEEEEEcCC------CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc-C-----CEE
Confidence 35679999997652 468999988764 8765433211 112234567899988642 2 468
Q ss_pred EEeeCCCCe--eEEeCC-CCC--CCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCc--EEEc
Q psy14726 509 EVYDPECNQ--WTLIEP-MRH--RRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKT--WSQV 568 (712)
Q Consensus 509 ~~yd~~~~~--W~~~~~-~p~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~ 568 (712)
..+|.+|++ |+.-.. -+. .....+.++.++.+|+..+.........+..||..+.+ |+.-
T Consensus 134 ~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 134 EAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp EEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 999998876 887643 111 11122335578988875432222234689999998875 8764
|
| >1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1 | Back alignment and structure |
|---|
Probab=93.84 E-value=3.3 Score=38.18 Aligned_cols=142 Identities=12% Similarity=0.104 Sum_probs=81.7
Q ss_pred EEEEECCEEEEEeecCCCCccceEEEEECCCC--cEE--Ee----CCCCCCcceeEEEEE--CCeEEEEcccCCCCCCce
Q psy14726 391 GTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTK--VWK--EI----APMNFKRCYVSTAVH--HDVIYAMGGYNGQRRQNS 460 (712)
Q Consensus 391 ~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~--~W~--~~----~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~ 460 (712)
+++.+++.+|+|=| +.+|+++.... ... .+ +.+|.. -. ++... ++++|+|-| +.
T Consensus 11 Ai~~~~g~~yfFkg-------~~~Wr~~~~~~~~~~~p~~Is~~w~glP~~-ID-Aa~~~~~~~~~yfFkG-------~~ 74 (195)
T 1itv_A 11 AIAEIGNQLYLFKD-------GKYWRFSEGRGSRPQGPFLIADKWPALPRK-LD-SVFEEPLSKKLFFFSG-------RQ 74 (195)
T ss_dssp EEEEETTEEEEEET-------TEEEEECCSSSCCCEEEEEHHHHCTTSCSS-CS-EEEECTTTCCEEEEET-------TE
T ss_pred EEEEeCCEEEEEEC-------CEEEEEECCccccCCCcEEhhhccCCCCCC-cc-EEEEECCCCeEEEEeC-------CE
Confidence 44556899999977 46788877552 222 11 234432 11 22222 689999987 56
Q ss_pred eEEeecCCCce-EEccc--CCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeE-----Ee----CCCCC
Q psy14726 461 VEKYNYTENQW-SLIAP--MNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWT-----LI----EPMRH 526 (712)
Q Consensus 461 v~~yd~~~~~W-~~~~~--~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~-----~~----~~~p~ 526 (712)
+|+|+..+..- ..+.. +|......-||.. ++++|++-| +..++||..+++=. .+ +.+|
T Consensus 75 yw~~~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg-------~~ywr~d~~~~~~~~gyPr~i~~~w~Gvp- 146 (195)
T 1itv_A 75 VWVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSG-------RRLWRFDVKAQMVDPRSASEVDRMFPGVP- 146 (195)
T ss_dssp EEEEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEET-------TEEEEEETTTTEECGGGCEEHHHHSTTSC-
T ss_pred EEEEcCCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeC-------CEEEEEeCCcccccCCCccChhhcCCCCC-
Confidence 88887542111 01111 2221112233333 689999977 46899998776421 11 1222
Q ss_pred CCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCc
Q psy14726 527 RRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKT 564 (712)
Q Consensus 527 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 564 (712)
..-.++...++.+|.+-| +..++||..+.+
T Consensus 147 -~~idaa~~~~g~~Yffkg-------~~y~~~~~~~~~ 176 (195)
T 1itv_A 147 -LDTHDVFQFREKAYFCQD-------RFYWRVSSRSEL 176 (195)
T ss_dssp -SSCSEEEEETTEEEEEET-------TEEEEEECCTTC
T ss_pred -CCCCEEEEeCCeEEEEeC-------CEEEEEECCccE
Confidence 223455566899999987 568888887654
|
| >2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A | Back alignment and structure |
|---|
Probab=93.77 E-value=0.01 Score=51.68 Aligned_cols=81 Identities=14% Similarity=0.191 Sum_probs=60.9
Q ss_pred cEEEEecCCcEEeceeeeecccCHHHHHhhcCCC----CcCCccceEEcCCCCHHHHHHHhhhhccCceecChh-hHHHH
Q psy14726 94 DATIVLADNSHFPIHRNILCACSDYFRALFTTSL----HDQEKFSLVEIPGVDASVMTSLIEYAYLRKLHITED-NVASL 168 (712)
Q Consensus 94 Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~----~e~~~~~~i~l~~~~~~~f~~~l~~~Yt~~~~i~~~-~~~~l 168 (712)
=|+|.| +|+.|...+..|..... .||...- ..... .++.| |=++..|+.||+|+-+|++.+..+ .+..+
T Consensus 36 ~V~LNV-GG~~F~T~~~TL~~~P~---S~L~~~~~~~~~~~~~-g~yFi-DRdp~~F~~ILnflR~G~l~~p~~~~~~~l 109 (140)
T 2nz0_B 36 LIVLNV-SGRRFQTWRTTLERYPD---TLLGSTEKEFFFNEDT-KEYFF-DRDPEVFRCVLNFYRTGKLHYPRYECISAY 109 (140)
T ss_dssp EEEEEE-TTEEEEEEHHHHHTCTT---STTTSGGGGGSEETTT-TEEEE-CSCHHHHHHHHHHHHHSSBCCCTTSCHHHH
T ss_pred EEEEEE-CCEEEEeeHHHHhcCCC---eeecccCCcccccCCC-CeEEE-eCCcHHHHHHHHHHhcCCcCCCCCcCHHHH
Confidence 488889 99999999999976432 2343311 11223 56666 469999999999999999987654 47889
Q ss_pred HHHhhhcChHHH
Q psy14726 169 LLATDFFCMSKA 180 (712)
Q Consensus 169 l~~A~~~~i~~L 180 (712)
++-|++|+|+.+
T Consensus 110 ~eEa~fy~i~~l 121 (140)
T 2nz0_B 110 DDELAFYGILPE 121 (140)
T ss_dssp HHHHHHHTCCGG
T ss_pred HHHHHHcCCChH
Confidence 999999999886
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=93.63 E-value=6.3 Score=43.13 Aligned_cols=237 Identities=10% Similarity=-0.046 Sum_probs=121.8
Q ss_pred CceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE--CCEEEEEeecCCCCccceEEEEECC--CC
Q psy14726 347 HEILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAV--TK 422 (712)
Q Consensus 347 ~~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~--~~ 422 (712)
.+.+++... ..+.+..+|..+++-... ++....-|++++. +..+|+.+ . ...+..||+. +.
T Consensus 166 ~~~~~V~~~-----~~~~V~viD~~t~~v~~~----i~~g~~p~~v~~SpDGr~lyv~~-~-----dg~V~viD~~~~t~ 230 (567)
T 1qks_A 166 ENLFSVTLR-----DAGQIALIDGSTYEIKTV----LDTGYAVHISRLSASGRYLFVIG-R-----DGKVNMIDLWMKEP 230 (567)
T ss_dssp GGEEEEEET-----TTTEEEEEETTTCCEEEE----EECSSCEEEEEECTTSCEEEEEE-T-----TSEEEEEETTSSSC
T ss_pred CceEEEEeC-----CCCeEEEEECCCCeEEEE----EeCCCCccceEECCCCCEEEEEc-C-----CCeEEEEECCCCCC
Confidence 345665543 235788999988865531 1122233555554 45677654 2 2469999995 44
Q ss_pred cEEEeCCCCCCcceeEEEEE-----CC-eEEEEcccCCCCCCceeEEeecCCCceEEc-c--cC--------Ccccccee
Q psy14726 423 VWKEIAPMNFKRCYVSTAVH-----HD-VIYAMGGYNGQRRQNSVEKYNYTENQWSLI-A--PM--------NVERSDAS 485 (712)
Q Consensus 423 ~W~~~~~~~~~r~~~~~~~~-----~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~--~~--------p~~r~~~~ 485 (712)
+- +..++....-..+++. +| .+|+..- ..+++.++|..+.+=... + .+ |.+|....
T Consensus 231 ~~--v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~-----~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i 303 (567)
T 1qks_A 231 TT--VAEIKIGSEARSIETSKMEGWEDKYAIAGAY-----WPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAI 303 (567)
T ss_dssp CE--EEEEECCSEEEEEEECCSTTCTTTEEEEEEE-----ETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEE
T ss_pred cE--eEEEecCCCCceeEEccccCCCCCEEEEEEc-----cCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEE
Confidence 32 2233322223344444 55 5666532 235688889766543221 1 11 11222221
Q ss_pred EEEECCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CC-EEEEEcCCCCCCccceEEEEeCCCC
Q psy14726 486 ATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HE-CIYVIGGFNGMSRMCNGEKYNPVTK 563 (712)
Q Consensus 486 ~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~~ 563 (712)
.+..++..+++-- .....++..|..+.....+..++..+.-|..... ++ .+|+.... .+.|.++|..++
T Consensus 304 ~~s~~~~~~vv~~----~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~-----sn~V~ViD~~t~ 374 (567)
T 1qks_A 304 LASHYRPEFIVNV----KETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANA-----RNKLVVIDTKEG 374 (567)
T ss_dssp EECSSSSEEEEEE----TTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGG-----GTEEEEEETTTT
T ss_pred EEcCCCCEEEEEe----cCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCC-----CCeEEEEECCCC
Confidence 1112222232221 1135678888877665555545555665555433 33 45554432 478999999987
Q ss_pred cEEE---c-CCCCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCC-----eEEEccCCC
Q psy14726 564 TWSQ---V-PDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTD-----EWYEATDMN 619 (712)
Q Consensus 564 ~W~~---~-~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~-----~W~~~~~~p 619 (712)
+-.. + +..|.+..+... .. ++.+|+.+-... ..|-++|..+. .|+.+..++
T Consensus 375 kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~----~~Vsvid~~~~~~~~~~~kvv~~i~ 436 (567)
T 1qks_A 375 KLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGD----DSVALIGTDPEGHPDNAWKILDSFP 436 (567)
T ss_dssp EEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSS----SEEEEEECCTTTCTTTBTSEEEEEE
T ss_pred cEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCC----CeEEEecCCCCCCccccCEEEEEEe
Confidence 6332 2 334444333332 23 366777652211 25778887763 387765544
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=93.60 E-value=3 Score=41.64 Aligned_cols=176 Identities=9% Similarity=0.064 Sum_probs=88.5
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCc----EEEeCCCCCCcceeEEEE-ECCe-EEEEcccCCCCCCceeEEeec-CC
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKV----WKEIAPMNFKRCYVSTAV-HHDV-IYAMGGYNGQRRQNSVEKYNY-TE 468 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~----W~~~~~~~~~r~~~~~~~-~~~~-iyv~GG~~~~~~~~~v~~yd~-~~ 468 (712)
++.+++.|+.+ ..+..||..++. ...... ....-.+++. -++. .++.|+.+ ..+..||. .+
T Consensus 22 ~~~~l~~~~~d-----~~v~iw~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~~wd~~~~ 89 (342)
T 1yfq_A 22 SKSLLLITSWD-----GSLTVYKFDIQAKNVDLLQSLR--YKHPLLCCNFIDNTDLQIYVGTVQ-----GEILKVDLIGS 89 (342)
T ss_dssp GGTEEEEEETT-----SEEEEEEEETTTTEEEEEEEEE--CSSCEEEEEEEESSSEEEEEEETT-----SCEEEECSSSS
T ss_pred CCCEEEEEcCC-----CeEEEEEeCCCCccccceeeee--cCCceEEEEECCCCCcEEEEEcCC-----CeEEEEEeccC
Confidence 44556666643 357788877665 333221 1112223333 3677 77777754 46899999 88
Q ss_pred CceEEcccCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCCC---e----eEEeCCCCCCCcceEEEEECCEEE
Q psy14726 469 NQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECN---Q----WTLIEPMRHRRSGVSCIAYHECIY 541 (712)
Q Consensus 469 ~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~---~----W~~~~~~p~~r~~~~~~~~~~~iy 541 (712)
.+...+...+....-.+++...+..++.|+.+ ..+..||..+. . .+.+..+.....-.++....+. +
T Consensus 90 ~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-l 163 (342)
T 1yfq_A 90 PSFQALTNNEANLGICRICKYGDDKLIAASWD-----GLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR-L 163 (342)
T ss_dssp SSEEECBSCCCCSCEEEEEEETTTEEEEEETT-----SEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE-E
T ss_pred CceEeccccCCCCceEEEEeCCCCEEEEEcCC-----CeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc-E
Confidence 87655543111111122222335566666655 35777776530 0 2222233323233344444555 5
Q ss_pred EEcCCCCCCccceEEEEeCCC-Cc--EEEcCCCCCCccceEEEEE--CCEEEEEcccCC
Q psy14726 542 VIGGFNGMSRMCNGEKYNPVT-KT--WSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNG 595 (712)
Q Consensus 542 v~GG~~~~~~~~~v~~yd~~~-~~--W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~ 595 (712)
+.|+.+ ..+..||..+ .. ...... +....-.+++.. ++..+++|+.++
T Consensus 164 ~~~~~d-----~~i~i~d~~~~~~~~~~~~~~-~~~~~i~~i~~~~~~~~~l~~~~~dg 216 (342)
T 1yfq_A 164 IVGMNN-----SQVQWFRLPLCEDDNGTIEES-GLKYQIRDVALLPKEQEGYACSSIDG 216 (342)
T ss_dssp EEEEST-----TEEEEEESSCCTTCCCEEEEC-SCSSCEEEEEECSGGGCEEEEEETTS
T ss_pred EEEeCC-----CeEEEEECCccccccceeeec-CCCCceeEEEECCCCCCEEEEEecCC
Confidence 555432 5788999887 32 222211 111112233333 467888888655
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=93.56 E-value=7.3 Score=39.71 Aligned_cols=71 Identities=15% Similarity=0.157 Sum_probs=42.4
Q ss_pred CCEEEEEcCCCC-----CCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCC
Q psy14726 537 HECIYVIGGFNG-----MSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKT 609 (712)
Q Consensus 537 ~~~iyv~GG~~~-----~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~ 609 (712)
++++|+....++ ......++.+|..+.+ .+..++.+. ..+++.. +..+|+.++ +.+.+||+++
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~--~v~~i~~~~-p~~ia~spdg~~l~v~n~-------~~v~v~D~~t 334 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ--RVARIPGRD-ALSMTIDQQRNLMLTLDG-------GNVNVYDISQ 334 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE--EEEEEECTT-CCEEEEETTTTEEEEECS-------SCEEEEECSS
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEECCCCc--EEEEEecCC-eeEEEECCCCCEEEEeCC-------CeEEEEECCC
Confidence 478999754111 1124689999998874 443344444 4555554 456666542 4789999988
Q ss_pred CeEEEccC
Q psy14726 610 DEWYEATD 617 (712)
Q Consensus 610 ~~W~~~~~ 617 (712)
+.=+.+..
T Consensus 335 ~~l~~~~~ 342 (361)
T 2oiz_A 335 PEPKLLRT 342 (361)
T ss_dssp SSCEEEEE
T ss_pred CcceeeEE
Confidence 62244444
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=93.49 E-value=1.7 Score=43.28 Aligned_cols=149 Identities=11% Similarity=-0.004 Sum_probs=77.5
Q ss_pred EEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCc-ceeEEEE-ECC-eEEEEcccCCCCCCceeEEeecCCCceEEc
Q psy14726 398 NIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKR-CYVSTAV-HHD-VIYAMGGYNGQRRQNSVEKYNYTENQWSLI 474 (712)
Q Consensus 398 ~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r-~~~~~~~-~~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 474 (712)
.+++.++. ...+..+|+.+++....-..+... ..+.++. -++ .+|+.++. ...+++||+.+.+-...
T Consensus 2 ~~~v~~~~-----~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~-----~~~v~~~d~~~~~~~~~ 71 (337)
T 1pby_B 2 DYILAPAR-----PDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNK-----SESLVKIDLVTGETLGR 71 (337)
T ss_dssp EEEEEEET-----TTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETT-----TTEEEEEETTTCCEEEE
T ss_pred cEEEEcCC-----CCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCC-----CCeEEEEECCCCCeEee
Confidence 34555553 256899999988764433333211 1122333 345 67776542 25799999988765432
Q ss_pred ccCCc----cccceeEEEE-CC-EEEEEcccC---CCC---ccCceEEeeCCCCeeEEeCCCCCCCcceEEEE-ECC-EE
Q psy14726 475 APMNV----ERSDASATTL-QG-KIYITGGFN---GHN---CLNSCEVYDPECNQWTLIEPMRHRRSGVSCIA-YHE-CI 540 (712)
Q Consensus 475 ~~~p~----~r~~~~~~~~-~~-~iyv~GG~~---~~~---~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~-~i 540 (712)
-+.+. ...-+.++.- ++ .+|+..+.. ... ....+.+||..+.+....-+.+.. -..++. -++ .|
T Consensus 72 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~--~~~~~~s~dg~~l 149 (337)
T 1pby_B 72 IDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQ--ITMLAWARDGSKL 149 (337)
T ss_dssp EECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSS--CCCEEECTTSSCE
T ss_pred EEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCC--cceeEECCCCCEE
Confidence 22211 0011222222 44 677764210 001 136799999988775433222211 122222 244 47
Q ss_pred EEEcCCCCCCccceEEEEeCCCCcEE
Q psy14726 541 YVIGGFNGMSRMCNGEKYNPVTKTWS 566 (712)
Q Consensus 541 yv~GG~~~~~~~~~v~~yd~~~~~W~ 566 (712)
|+.+ ..+..||+.+.+-.
T Consensus 150 ~~~~--------~~i~~~d~~~~~~~ 167 (337)
T 1pby_B 150 YGLG--------RDLHVMDPEAGTLV 167 (337)
T ss_dssp EEES--------SSEEEEETTTTEEE
T ss_pred EEeC--------CeEEEEECCCCcEe
Confidence 7662 46899999887654
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=93.46 E-value=6.6 Score=44.08 Aligned_cols=176 Identities=11% Similarity=0.084 Sum_probs=86.6
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCC-CCCcceeEEE
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPM-NFKRCYVSTA 440 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-~~~r~~~~~~ 440 (712)
..|..+|..++.-...-.. ....-.+++.. ++..++.|+.+ ..+..+|.....-..+... ...+....++
T Consensus 452 g~v~vwd~~~~~~~~~~~~---h~~~v~~~~~s~~~~~l~s~s~D-----~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~ 523 (694)
T 3dm0_A 452 GELRLWDLAAGVSTRRFVG---HTKDVLSVAFSLDNRQIVSASRD-----RTIKLWNTLGECKYTISEGGEGHRDWVSCV 523 (694)
T ss_dssp SEEEEEETTTTEEEEEEEC---CSSCEEEEEECTTSSCEEEEETT-----SCEEEECTTSCEEEEECSSTTSCSSCEEEE
T ss_pred CcEEEEECCCCcceeEEeC---CCCCEEEEEEeCCCCEEEEEeCC-----CEEEEEECCCCcceeeccCCCCCCCcEEEE
Confidence 3577888777654321011 01111223332 56666777754 3577788765443333221 1122222222
Q ss_pred EE--CC--eEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCC
Q psy14726 441 VH--HD--VIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPE 514 (712)
Q Consensus 441 ~~--~~--~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~ 514 (712)
.+ ++ ..++.|+.+ ..+.+||..+.+-... +........++.+ ++++++.||.++ .+..||..
T Consensus 524 ~~~~~~~~~~l~s~s~d-----~~v~vwd~~~~~~~~~--~~~h~~~v~~v~~spdg~~l~sg~~Dg-----~i~iwd~~ 591 (694)
T 3dm0_A 524 RFSPNTLQPTIVSASWD-----KTVKVWNLSNCKLRST--LAGHTGYVSTVAVSPDGSLCASGGKDG-----VVLLWDLA 591 (694)
T ss_dssp EECSCSSSCEEEEEETT-----SCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS-----BCEEEETT
T ss_pred EEeCCCCcceEEEEeCC-----CeEEEEECCCCcEEEE--EcCCCCCEEEEEEeCCCCEEEEEeCCC-----eEEEEECC
Confidence 22 22 456666644 4588899877654322 1111111222233 677888888664 57888888
Q ss_pred CCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcE
Q psy14726 515 CNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTW 565 (712)
Q Consensus 515 ~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 565 (712)
+.+- +..+.....-.+++...+..++++|.+ ..+..||..+.+-
T Consensus 592 ~~~~--~~~~~~~~~v~~~~~sp~~~~l~~~~~-----~~i~iwd~~~~~~ 635 (694)
T 3dm0_A 592 EGKK--LYSLEANSVIHALCFSPNRYWLCAATE-----HGIKIWDLESKSI 635 (694)
T ss_dssp TTEE--EECCBCSSCEEEEEECSSSSEEEEEET-----TEEEEEETTTTEE
T ss_pred CCce--EEEecCCCcEEEEEEcCCCcEEEEEcC-----CCEEEEECCCCCC
Confidence 7753 222222222333333333333444322 4588889887653
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=93.45 E-value=1.2 Score=50.01 Aligned_cols=196 Identities=9% Similarity=-0.030 Sum_probs=107.4
Q ss_pred ceEEEEECC--C-CcEEEeCCCCC----CcceeEEEEECCeEEEEcccCC-----CCCCceeEEeecCC------CceEE
Q psy14726 412 NSCRCFNAV--T-KVWKEIAPMNF----KRCYVSTAVHHDVIYAMGGYNG-----QRRQNSVEKYNYTE------NQWSL 473 (712)
Q Consensus 412 ~~v~~yd~~--~-~~W~~~~~~~~----~r~~~~~~~~~~~iyv~GG~~~-----~~~~~~v~~yd~~~------~~W~~ 473 (712)
..+|.+|.. + +....+...+. .+.......-+|+.++++.... .....+++.+|..+ .+...
T Consensus 102 ~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 181 (662)
T 3azo_A 102 QRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRE 181 (662)
T ss_dssp CCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEE
T ss_pred CeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeE
Confidence 568999987 4 66666665431 2222223334665555544321 12336799999988 66665
Q ss_pred cc-cCCccccceeEEEECCEEEEEcccCCCC---ccCceEEeeCC-CC---eeEEeCCCCCCCcceEEE-EECCEEEEEc
Q psy14726 474 IA-PMNVERSDASATTLQGKIYITGGFNGHN---CLNSCEVYDPE-CN---QWTLIEPMRHRRSGVSCI-AYHECIYVIG 544 (712)
Q Consensus 474 ~~-~~p~~r~~~~~~~~~~~iyv~GG~~~~~---~~~~v~~yd~~-~~---~W~~~~~~p~~r~~~~~~-~~~~~iyv~G 544 (712)
+. .-+ ......+..-+|+..++...+... ...+++.+|.. ++ ....+..-.. ....... .-+|++|+.+
T Consensus 182 l~~~~~-~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~-~~~~~~~~spdg~l~~~~ 259 (662)
T 3azo_A 182 LSDDAH-RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPE-EAIAQAEWAPDGSLIVAT 259 (662)
T ss_dssp SSCSCS-SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETT-BCEEEEEECTTSCEEEEE
T ss_pred EEecCC-CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCC-ceEcceEECCCCeEEEEE
Confidence 54 221 111111222266544444433211 13579999998 56 4444432111 1112222 2367788777
Q ss_pred CCCCCCccceEEEEeCCCCcEEEcCCCCCCc----c---ceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCeEEEcc
Q psy14726 545 GFNGMSRMCNGEKYNPVTKTWSQVPDMYNPR----S---NFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEAT 616 (712)
Q Consensus 545 G~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r----~---~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 616 (712)
..++ ...++.+|+.+.+|..+....... . ....+.. ++++++.+.. + ...+|.+|+.++....+.
T Consensus 260 ~~~~---~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~---~~~l~~~d~~~~~~~~l~ 332 (662)
T 3azo_A 260 DRTG---WWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-G---AAVLGILDPESGELVDAA 332 (662)
T ss_dssp CTTS---SCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-S---SCEEEEEETTTTEEEECC
T ss_pred CCCC---CeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-C---ccEEEEEECCCCcEEEec
Confidence 6442 347999999899998885432111 0 1123333 6777777665 3 246888899888877663
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=93.41 E-value=7 Score=39.08 Aligned_cols=213 Identities=8% Similarity=-0.052 Sum_probs=106.5
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEE
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 426 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 426 (712)
+.+++++.. ...+..||+.++....+.. + ..-.+++.. ++.+++... ..+++||+.+++...
T Consensus 61 ~~l~~~d~~-----~~~i~~~d~~~~~~~~~~~---~--~~v~~i~~~~dg~l~v~~~-------~gl~~~d~~~g~~~~ 123 (326)
T 2ghs_A 61 GTAWWFNIL-----ERELHELHLASGRKTVHAL---P--FMGSALAKISDSKQLIASD-------DGLFLRDTATGVLTL 123 (326)
T ss_dssp TEEEEEEGG-----GTEEEEEETTTTEEEEEEC---S--SCEEEEEEEETTEEEEEET-------TEEEEEETTTCCEEE
T ss_pred CEEEEEECC-----CCEEEEEECCCCcEEEEEC---C--CcceEEEEeCCCeEEEEEC-------CCEEEEECCCCcEEE
Confidence 456665532 2468899998877654322 1 122333333 778877542 359999999999877
Q ss_pred eCCCCC----CcceeEEEEECCeEEEEcccC-CCCCCceeEEeecCCCceEEcccCCccccceeEEEE-CC-EEEEEccc
Q psy14726 427 IAPMNF----KRCYVSTAVHHDVIYAMGGYN-GQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL-QG-KIYITGGF 499 (712)
Q Consensus 427 ~~~~~~----~r~~~~~~~~~~~iyv~GG~~-~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~ 499 (712)
+...+. .+.....+.-+|++|+..... .......++++| +.+...+..- .....+.+.- ++ .+|+....
T Consensus 124 ~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~--~~~~~~i~~s~dg~~lyv~~~~ 199 (326)
T 2ghs_A 124 HAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFAD--ISIPNSICFSPDGTTGYFVDTK 199 (326)
T ss_dssp EECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEE--ESSEEEEEECTTSCEEEEEETT
T ss_pred EeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCC--CcccCCeEEcCCCCEEEEEECC
Confidence 654322 122222233467887743211 112346789998 5665544210 0111122222 44 58886532
Q ss_pred CCCCccCceEEeeCC--CC-eeE---EeCCCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCC
Q psy14726 500 NGHNCLNSCEVYDPE--CN-QWT---LIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDM 571 (712)
Q Consensus 500 ~~~~~~~~v~~yd~~--~~-~W~---~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~ 571 (712)
.+.+++||.. ++ ... .+..++..........+ ++.||+.... ...+.+||+....-..+. .
T Consensus 200 -----~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~-----~~~v~~~d~~g~~~~~i~-~ 268 (326)
T 2ghs_A 200 -----VNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWG-----EGAVDRYDTDGNHIARYE-V 268 (326)
T ss_dssp -----TCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEET-----TTEEEEECTTCCEEEEEE-C
T ss_pred -----CCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeC-----CCEEEEECCCCCEEEEEE-C
Confidence 2568888865 44 211 11111111111122233 5678886521 247899999544333332 2
Q ss_pred CCCccceEEEEE---C-CEEEEEcccC
Q psy14726 572 YNPRSNFAIEVI---D-DMIFAIGGFN 594 (712)
Q Consensus 572 p~~r~~~~~~~~---~-~~i~v~GG~~ 594 (712)
|.. ....+.+ + +.||+.....
T Consensus 269 ~~~--~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 269 PGK--QTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp SCS--BEEEEEEESTTSCEEEEEEBCT
T ss_pred CCC--CcEEEEEecCCCCEEEEEecCC
Confidence 321 2233333 2 4677765443
|
| >3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A | Back alignment and structure |
|---|
Probab=93.40 E-value=9.1 Score=43.55 Aligned_cols=183 Identities=14% Similarity=0.119 Sum_probs=100.3
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA 475 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 475 (712)
++.|+|... +.+++||+.++++...... ....-.+++..+|.|++... +.+++||+.++++....
T Consensus 73 ~g~lWigT~-------~Gl~~yd~~~~~f~~~~~~-~~~~i~~i~~~~g~lWigt~-------~Gl~~~~~~~~~~~~~~ 137 (758)
T 3ott_A 73 NTYLYMGTD-------NGILVYNYRADRYEQPETD-FPTDVRTMALQGDTLWLGAL-------NGLYTYQLQSRKLTSFD 137 (758)
T ss_dssp TTEEEEEET-------TEEEEEETTTTEECCCSCC-CCSCEEEEEEETTEEEEEET-------TEEEEEETTTCCEEEEC
T ss_pred CCcEEEEeC-------CCeEEEeCCCCEEECcccC-CCceEEEEEecCCcEEEEcC-------CcceeEeCCCCeEEEec
Confidence 677876532 4589999999887652111 11112233445788887421 35899999999887662
Q ss_pred cCC--ccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCC-C---CcceEEEEE--CCEEEEEcC
Q psy14726 476 PMN--VERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRH-R---RSGVSCIAY--HECIYVIGG 545 (712)
Q Consensus 476 ~~p--~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~-~---r~~~~~~~~--~~~iyv~GG 545 (712)
..+ .+......... ++.|+|.. . +.+.+||+.+++++....... . ..-.+++.. ++.|+|..
T Consensus 138 ~~~~~l~~~~i~~i~~d~~g~lWigt--~-----~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt- 209 (758)
T 3ott_A 138 TRRNGLPNNTIYSIIRTKDNQIYVGT--Y-----NGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGT- 209 (758)
T ss_dssp HHHHCCSCSCEEEEEECTTCCEEEEE--T-----TEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEE-
T ss_pred cCCCCcCCCeEEEEEEcCCCCEEEEe--C-----CCHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEE-
Confidence 211 11111112222 67888732 1 348899999998876642111 0 111223333 24577732
Q ss_pred CCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCeEEEc
Q psy14726 546 FNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 546 ~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
...+.+||+.++++.....++.. .-.+++.- ++.|+|-- . ..+.+||+.++.+...
T Consensus 210 ------~~Gl~~~~~~~~~~~~~~~l~~~-~i~~i~~d~~g~lWigT-~------~Gl~~~~~~~~~~~~~ 266 (758)
T 3ott_A 210 ------EGYLFQYFPSTGQIKQTEAFHNN-SIKSLALDGNGDLLAGT-D------NGLYVYHNDTTPLQHI 266 (758)
T ss_dssp ------EEEEEEEETTTTEEEEEEEEEEE-EEEEEEECTTCCEEEEE-T------TEEEEECCTTSCCEEE
T ss_pred ------CCCCeEEcCCCCeEEeccCCCCC-eEEEEEEcCCCCEEEEe-C------CceeEEecCCCcEEEE
Confidence 13588999999988765433211 11122222 55666542 1 1367788877776554
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.39 E-value=3.4 Score=41.48 Aligned_cols=184 Identities=11% Similarity=0.098 Sum_probs=94.0
Q ss_pred CEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcce-eEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEc
Q psy14726 397 YNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCY-VSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 474 (712)
Q Consensus 397 ~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 474 (712)
+.+++.|+.+ ..+..||..+........+...... .+++. -++..++.|+.+ ..+..||..+.+....
T Consensus 54 g~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~~~~ 123 (368)
T 3mmy_A 54 GNFLIAGSWA-----NDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCD-----KTAKMWDLSSNQAIQI 123 (368)
T ss_dssp SEEEEEEETT-----SEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEE
T ss_pred ceEEEEECCC-----CcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCC-----CcEEEEEcCCCCceee
Confidence 4788888754 3578888876332221111111111 22222 256677777643 4688999988876544
Q ss_pred ccCCccccceeEEE---ECCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCc
Q psy14726 475 APMNVERSDASATT---LQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSR 551 (712)
Q Consensus 475 ~~~p~~r~~~~~~~---~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~ 551 (712)
.... ..-.+++. -++.+++.|+.++ .+..||..+.+-...- .......+.....+.+++.++
T Consensus 124 ~~~~--~~v~~~~~~~~~~~~~l~~~~~dg-----~i~vwd~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~------ 188 (368)
T 3mmy_A 124 AQHD--APVKTIHWIKAPNYSCVMTGSWDK-----TLKFWDTRSSNPMMVL--QLPERCYCADVIYPMAVVATA------ 188 (368)
T ss_dssp EECS--SCEEEEEEEECSSCEEEEEEETTS-----EEEEECSSCSSCSEEE--ECSSCEEEEEEETTEEEEEEG------
T ss_pred cccc--CceEEEEEEeCCCCCEEEEccCCC-----cEEEEECCCCcEEEEE--ecCCCceEEEecCCeeEEEeC------
Confidence 2211 11122222 2677788887663 5888888766422111 112223334444565555544
Q ss_pred cceEEEEeCCCC--cEEEcCCCCCCccceEEEEEC----CEEEEEcccCCCceeeeEEEEECCCC
Q psy14726 552 MCNGEKYNPVTK--TWSQVPDMYNPRSNFAIEVID----DMIFAIGGFNGVTTIYHVECYDEKTD 610 (712)
Q Consensus 552 ~~~v~~yd~~~~--~W~~~~~~p~~r~~~~~~~~~----~~i~v~GG~~~~~~~~~v~~yd~~~~ 610 (712)
...+..||.... .+..+...............+ ...++.|+.++ .+.+||....
T Consensus 189 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg-----~i~i~~~~~~ 248 (368)
T 3mmy_A 189 ERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEG-----RVAIHYINPP 248 (368)
T ss_dssp GGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTS-----EEEEEESSCS
T ss_pred CCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCC-----cEEEEecCCC
Confidence 256778887654 344443322111111122222 23367777655 5677777654
|
| >1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1 | Back alignment and structure |
|---|
Probab=93.38 E-value=2.8 Score=38.73 Aligned_cols=142 Identities=9% Similarity=0.067 Sum_probs=82.4
Q ss_pred EEEEECCeEEEEcccCCCCCCceeEEeecCCC--ceE--Ec----ccCCccccceeEEEE--CCEEEEEcccCCCCccCc
Q psy14726 438 STAVHHDVIYAMGGYNGQRRQNSVEKYNYTEN--QWS--LI----APMNVERSDASATTL--QGKIYITGGFNGHNCLNS 507 (712)
Q Consensus 438 ~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W~--~~----~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~ 507 (712)
+++..+|++|+|=| +.+|+++.... ... .+ +.+|.. .. ++... ++++|++-| +.
T Consensus 11 Ai~~~~g~~yfFkg-------~~~Wr~~~~~~~~~~~p~~Is~~w~glP~~-ID-Aa~~~~~~~~~yfFkG-------~~ 74 (195)
T 1itv_A 11 AIAEIGNQLYLFKD-------GKYWRFSEGRGSRPQGPFLIADKWPALPRK-LD-SVFEEPLSKKLFFFSG-------RQ 74 (195)
T ss_dssp EEEEETTEEEEEET-------TEEEEECCSSSCCCEEEEEHHHHCTTSCSS-CS-EEEECTTTCCEEEEET-------TE
T ss_pred EEEEeCCEEEEEEC-------CEEEEEECCccccCCCcEEhhhccCCCCCC-cc-EEEEECCCCeEEEEeC-------CE
Confidence 35567999999977 56888876552 221 11 234431 11 22222 688999987 45
Q ss_pred eEEeeCCCCee-EEeC--CCCCC--CcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEE-----c----CCCCC
Q psy14726 508 CEVYDPECNQW-TLIE--PMRHR--RSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQ-----V----PDMYN 573 (712)
Q Consensus 508 v~~yd~~~~~W-~~~~--~~p~~--r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-----~----~~~p~ 573 (712)
.|+|+..+..- ..+. .+|.. ...++....++++|++-| +..|+||..+++=.. + +.+|
T Consensus 75 yw~~~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg-------~~ywr~d~~~~~~~~gyPr~i~~~w~Gvp- 146 (195)
T 1itv_A 75 VWVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSG-------RRLWRFDVKAQMVDPRSASEVDRMFPGVP- 146 (195)
T ss_dssp EEEEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEET-------TEEEEEETTTTEECGGGCEEHHHHSTTSC-
T ss_pred EEEEcCCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeC-------CEEEEEeCCcccccCCCccChhhcCCCCC-
Confidence 77887542111 1111 12321 233333333689999987 578999987653211 1 1222
Q ss_pred CccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 574 PRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 574 ~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
..-.++...++.+|++-|. ..|.||..+.+
T Consensus 147 -~~idaa~~~~g~~Yffkg~-------~y~~~~~~~~~ 176 (195)
T 1itv_A 147 -LDTHDVFQFREKAYFCQDR-------FYWRVSSRSEL 176 (195)
T ss_dssp -SSCSEEEEETTEEEEEETT-------EEEEEECCTTC
T ss_pred -CCCCEEEEeCCeEEEEeCC-------EEEEEECCccE
Confidence 2234555668999999773 57899987765
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=93.06 E-value=3.7 Score=41.34 Aligned_cols=186 Identities=9% Similarity=0.008 Sum_probs=92.9
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEE-e--CCCCCCcce--eEEEEECCeEEEEcccCCCCCCceeEEeecCCCc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE-I--APMNFKRCY--VSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQ 470 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~-~--~~~~~~r~~--~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 470 (712)
++.+++.||.++ .+..||..+++-.. + .....-... ...+..++.|.+... ...+..||..+.+
T Consensus 47 d~~~l~sg~~Dg-----~v~iwd~~~~~~~~~~~~~~v~~~~~~~~~~s~s~D~~i~~w~~------~~~~~~~~~~~~~ 115 (343)
T 3lrv_A 47 DKWVCMCRCEDG-----ALHFTQLKDSKTITTITTPNPRTGGEHPAIISRGPCNRLLLLYP------GNQITILDSKTNK 115 (343)
T ss_dssp EEEEEEEEEETT-----EEEEEEESSSSCEEEEEEECCCTTCCCCSEEEECSTTEEEEEET------TTEEEEEETTTCC
T ss_pred CCCEEEEECCCC-----cEEEEECCCCcEEEEEecCCceeeeeCCceEEecCCCeEEEEEc------cCceEEeecCCcc
Confidence 466777888643 57888877665321 1 111100000 222233444544422 1345667766665
Q ss_pred eEEcccCCccccceeEEEE----CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEE-ECCEEEEEcC
Q psy14726 471 WSLIAPMNVERSDASATTL----QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIA-YHECIYVIGG 545 (712)
Q Consensus 471 W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG 545 (712)
-...-..+... ....+.+ ++.+++.|+.++ .+..||..+++-...........-.+++. -++.+++.|+
T Consensus 116 ~~~~~~~~~~~-~v~~~~~~~~~~~~~l~s~s~dg-----~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~ 189 (343)
T 3lrv_A 116 VLREIEVDSAN-EIIYMYGHNEVNTEYFIWADNRG-----TIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYS 189 (343)
T ss_dssp EEEEEECCCSS-CEEEEECCC---CCEEEEEETTC-----CEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEEC
T ss_pred eeEEeecCCCC-CEEEEEcCCCCCCCEEEEEeCCC-----cEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEc
Confidence 22111111111 1111111 566777787664 58889988877644332222212222332 2677888887
Q ss_pred CCCCCccceEEEEeCCCCcEE--EcCCCCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 546 FNGMSRMCNGEKYNPVTKTWS--QVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 546 ~~~~~~~~~v~~yd~~~~~W~--~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
.+ ..+..||..+.+-. .+.. . .......+.+ ++..++.|+ ++ .+.+||+.+..
T Consensus 190 ~d-----g~i~iwd~~~~~~~~~~~~~-~-h~~~v~~l~fs~~g~~l~s~~-~~-----~v~iwd~~~~~ 246 (343)
T 3lrv_A 190 PD-----GILDVYNLSSPDQASSRFPV-D-EEAKIKEVKFADNGYWMVVEC-DQ-----TVVCFDLRKDV 246 (343)
T ss_dssp TT-----SCEEEEESSCTTSCCEECCC-C-TTSCEEEEEECTTSSEEEEEE-SS-----BEEEEETTSST
T ss_pred CC-----CEEEEEECCCCCCCccEEec-c-CCCCEEEEEEeCCCCEEEEEe-CC-----eEEEEEcCCCC
Confidence 64 57889999876532 2211 0 1112222333 666777777 32 58889987753
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=93.01 E-value=4.4 Score=40.77 Aligned_cols=140 Identities=14% Similarity=0.141 Sum_probs=65.8
Q ss_pred eEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEe
Q psy14726 349 ILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEI 427 (712)
Q Consensus 349 ~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 427 (712)
.+++.|+.+ ..+..+|..+++....-.. ....-.+++.. ++..++.||.+ ..+..||.....-...
T Consensus 89 ~~l~s~s~D-----~~v~lwd~~~~~~~~~~~~---h~~~v~~v~~sp~~~~l~s~~~d-----~~i~~wd~~~~~~~~~ 155 (343)
T 2xzm_R 89 CFAISSSWD-----KTLRLWDLRTGTTYKRFVG---HQSEVYSVAFSPDNRQILSAGAE-----REIKLWNILGECKFSS 155 (343)
T ss_dssp TEEEEEETT-----SEEEEEETTSSCEEEEEEC---CCSCEEEEEECSSTTEEEEEETT-----SCEEEEESSSCEEEEC
T ss_pred CEEEEEcCC-----CcEEEEECCCCcEEEEEcC---CCCcEEEEEECCCCCEEEEEcCC-----CEEEEEeccCCceeee
Confidence 345555532 3678889887765431011 11112233333 56666777754 3578888765433332
Q ss_pred CCCCCCcceeEEEEEC------------CeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEE
Q psy14726 428 APMNFKRCYVSTAVHH------------DVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKI 493 (712)
Q Consensus 428 ~~~~~~r~~~~~~~~~------------~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i 493 (712)
............+.+. +..++.||.+ ..+..||..... ...+.........+.+ +++.
T Consensus 156 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~---~~~~~~h~~~v~~~~~s~~g~~ 227 (343)
T 2xzm_R 156 AEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWD-----GRLKVWNTNFQI---RYTFKAHESNVNHLSISPNGKY 227 (343)
T ss_dssp CTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETT-----SEEEEEETTTEE---EEEEECCSSCEEEEEECTTSSE
T ss_pred ecccCCCceeeeeeeccccccccccCCCCCEEEEEcCC-----CEEEEEcCCCce---eEEEcCccccceEEEECCCCCE
Confidence 2221111111222221 1456666643 457777733221 1111111111222233 6777
Q ss_pred EEEcccCCCCccCceEEeeCC
Q psy14726 494 YITGGFNGHNCLNSCEVYDPE 514 (712)
Q Consensus 494 yv~GG~~~~~~~~~v~~yd~~ 514 (712)
++.||.++ .+..||..
T Consensus 228 l~sgs~dg-----~v~iwd~~ 243 (343)
T 2xzm_R 228 IATGGKDK-----KLLIWDIL 243 (343)
T ss_dssp EEEEETTC-----EEEEEESS
T ss_pred EEEEcCCC-----eEEEEECC
Confidence 78887664 57778763
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=92.97 E-value=3.9 Score=46.05 Aligned_cols=188 Identities=10% Similarity=0.055 Sum_probs=95.6
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 474 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 474 (712)
++.+++.|+.+ ..+..+|..+++-...-.-... .-.+++. .++..++.|+.+ ..+.+||.....-..+
T Consensus 441 ~g~~l~sgs~D-----g~v~vwd~~~~~~~~~~~~h~~-~v~~~~~s~~~~~l~s~s~D-----~~i~iwd~~~~~~~~~ 509 (694)
T 3dm0_A 441 DGQFALSGSWD-----GELRLWDLAAGVSTRRFVGHTK-DVLSVAFSLDNRQIVSASRD-----RTIKLWNTLGECKYTI 509 (694)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTTEEEEEEECCSS-CEEEEEECTTSSCEEEEETT-----SCEEEECTTSCEEEEE
T ss_pred CCCEEEEEeCC-----CcEEEEECCCCcceeEEeCCCC-CEEEEEEeCCCCEEEEEeCC-----CEEEEEECCCCcceee
Confidence 66777788754 4688999887754321111111 1122222 356666777654 4577788655432222
Q ss_pred ccCCcc-ccceeEEEE--CC--EEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--CCEEEEEcCCC
Q psy14726 475 APMNVE-RSDASATTL--QG--KIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFN 547 (712)
Q Consensus 475 ~~~p~~-r~~~~~~~~--~~--~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~ 547 (712)
.....+ +....++.+ ++ ..++.|+.++ .+.+||..+.+-... +.........+.+ ++.+++.||.+
T Consensus 510 ~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~-----~v~vwd~~~~~~~~~--~~~h~~~v~~v~~spdg~~l~sg~~D 582 (694)
T 3dm0_A 510 SEGGEGHRDWVSCVRFSPNTLQPTIVSASWDK-----TVKVWNLSNCKLRST--LAGHTGYVSTVAVSPDGSLCASGGKD 582 (694)
T ss_dssp CSSTTSCSSCEEEEEECSCSSSCEEEEEETTS-----CEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred ccCCCCCCCcEEEEEEeCCCCcceEEEEeCCC-----eEEEEECCCCcEEEE--EcCCCCCEEEEEEeCCCCEEEEEeCC
Confidence 111111 112223333 22 4666676553 588888877654322 1111112222223 57778888764
Q ss_pred CCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeEE
Q psy14726 548 GMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWY 613 (712)
Q Consensus 548 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 613 (712)
..+..||..+.+-.. .+.....-.+++...+..++.+|.++ .+.+||..+++-.
T Consensus 583 -----g~i~iwd~~~~~~~~--~~~~~~~v~~~~~sp~~~~l~~~~~~-----~i~iwd~~~~~~~ 636 (694)
T 3dm0_A 583 -----GVVLLWDLAEGKKLY--SLEANSVIHALCFSPNRYWLCAATEH-----GIKIWDLESKSIV 636 (694)
T ss_dssp -----SBCEEEETTTTEEEE--CCBCSSCEEEEEECSSSSEEEEEETT-----EEEEEETTTTEEE
T ss_pred -----CeEEEEECCCCceEE--EecCCCcEEEEEEcCCCcEEEEEcCC-----CEEEEECCCCCCh
Confidence 467788988765322 22222223344444333344444332 4888998887543
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=92.71 E-value=4.2 Score=40.73 Aligned_cols=186 Identities=12% Similarity=0.006 Sum_probs=98.5
Q ss_pred ccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE
Q psy14726 410 YYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL 489 (712)
Q Consensus 410 ~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 489 (712)
....++.+|..+++-..+ .........-+|+.+++...........++.+|..+.+...+...+. ......
T Consensus 41 ~~~~l~~~d~~~~~~~~l-----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~----~~~~~w 111 (347)
T 2gop_A 41 YENTIVIENLKNNARRFI-----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN----IRSLEW 111 (347)
T ss_dssp EEEEEEEEETTTCCEEEE-----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE----EEEEEE
T ss_pred ccceEEEEeCCCCceEEc-----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC----ccceeE
Confidence 356789999998876665 11112222335654444433221223569999998888776654432 222233
Q ss_pred --CCEEEEEcccC------------------CC----CccCceEEeeCCCCee-EEeCCCCCCCcceEEEEECCEEEEEc
Q psy14726 490 --QGKIYITGGFN------------------GH----NCLNSCEVYDPECNQW-TLIEPMRHRRSGVSCIAYHECIYVIG 544 (712)
Q Consensus 490 --~~~iyv~GG~~------------------~~----~~~~~v~~yd~~~~~W-~~~~~~p~~r~~~~~~~~~~~iyv~G 544 (712)
+++.++++... +. .....++.+|..+++. ..+.. + .........+.+++.+
T Consensus 112 spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~---~~~~~~~spdg~~~~~ 187 (347)
T 2gop_A 112 NEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P---RFSSGIWHRDKIVVNV 187 (347)
T ss_dssp CTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E---TTCEEEEETTEEEEEE
T ss_pred CCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C---CcccccCCCCeEEEEE
Confidence 55433333321 00 1135689999999887 66654 3 2223333333355555
Q ss_pred CCCCCC---c-cceEEEEeCCCCcEEEcCCCCCCccceEEEEECCEEEEEcccCCC---ceeeeEEEEECCCCeEEEcc
Q psy14726 545 GFNGMS---R-MCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGV---TTIYHVECYDEKTDEWYEAT 616 (712)
Q Consensus 545 G~~~~~---~-~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~---~~~~~v~~yd~~~~~W~~~~ 616 (712)
..+... . ...++.+| +.++..+..- .......-+++.+++++.... .....++++| ++++..+.
T Consensus 188 ~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~----~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~ 258 (347)
T 2gop_A 188 PHREIIPQYFKFWDIYIWE--DGKEEKMFEK----VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGIL 258 (347)
T ss_dssp ECCCSSCCSSCCEEEEEEE--TTEEEEEEEE----ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESS
T ss_pred ecccccccccccccEEEeC--CCceEEeccC----cceeeECCCCCEEEEEEccccCCccccceEEEEC--CCceEecc
Confidence 433221 1 45788888 6777766432 112222446654444443221 1234789999 66776663
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.69 E-value=0.077 Score=55.12 Aligned_cols=140 Identities=14% Similarity=0.113 Sum_probs=57.4
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCc--EEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCC--ce
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKV--WKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTEN--QW 471 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W 471 (712)
++.||+.+. + ..++.+|..+++ |+.-. .. ...+.++.++++|+.|+.+ ..++.+|..+. .|
T Consensus 9 ~~~v~~gs~-d-----g~v~a~d~~tG~~~W~~~~--~~--~~s~p~~~~g~~~v~~s~d-----g~l~a~d~~tG~~~w 73 (369)
T 2hz6_A 9 ETLLFVSTL-D-----GSLHAVSKRTGSIKWTLKE--DP--VLQVPTHVEEPAFLPDPND-----GSLYTLGSKNNEGLT 73 (369)
T ss_dssp TTEEEEEET-T-----SEEEEEETTTCCEEEEEEC--CC--SCCCC-----CCEEECTTT-----CCEEEC-----CCSE
T ss_pred CCEEEEEcC-C-----CEEEEEECCCCCEEEEecC--CC--ceecceEcCCCEEEEeCCC-----CEEEEEECCCCceee
Confidence 566665432 2 368999998876 76533 11 1122344567788876533 45899998654 46
Q ss_pred EEcccCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCe--eEEeCCCCCCCcceEEEEECCEEEEEcCCCCC
Q psy14726 472 SLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQ--WTLIEPMRHRRSGVSCIAYHECIYVIGGFNGM 549 (712)
Q Consensus 472 ~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~ 549 (712)
..-...+.......+...++.+|+ |+.+ ..+..+|+.+++ |+.-..-. .+ .+..++.+|+.+ .
T Consensus 74 ~~~~~~~~~~~~sp~~~~~~~v~~-g~~d-----g~v~a~D~~tG~~~w~~~~~~~-~~----~~p~~~~v~~~~-~--- 138 (369)
T 2hz6_A 74 KLPFTIPELVQASPCRSSDGILYM-GKKQ-----DIWYVIDLLTGEKQQTLSSAFA-DS----LSPSTSLLYLGR-T--- 138 (369)
T ss_dssp ECSCCHHHHHTTCSCC-----CCC-CEEE-----EEEEEECCC---------------------------EEEEE-E---
T ss_pred eeeccCccccccCceEecCCEEEE-EeCC-----CEEEEEECCCCcEEEEecCCCc-cc----ccccCCEEEEEe-c---
Confidence 532221111111111113555554 3322 458899988765 65433211 01 111345565543 2
Q ss_pred CccceEEEEeCCCCc--EEE
Q psy14726 550 SRMCNGEKYNPVTKT--WSQ 567 (712)
Q Consensus 550 ~~~~~v~~yd~~~~~--W~~ 567 (712)
-..+.++|+.+.+ |+.
T Consensus 139 --dg~v~a~d~~tG~~~W~~ 156 (369)
T 2hz6_A 139 --EYTITMYDTKTRELRWNA 156 (369)
T ss_dssp --EEEEECCCSSSSSCCCEE
T ss_pred --CCEEEEEECCCCCEEEeE
Confidence 2467888887654 764
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=92.51 E-value=7.9 Score=38.40 Aligned_cols=222 Identities=9% Similarity=0.055 Sum_probs=104.1
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEE
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 426 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 426 (712)
+..++.|+.+ ..+..+|..+++-...-.. . ...-.++++. ++.+++.|+.++ .+..||.....-..
T Consensus 77 g~~l~s~s~D-----~~v~~wd~~~~~~~~~~~~--h-~~~v~~~~~~~~~~~l~s~s~D~-----~i~vwd~~~~~~~~ 143 (319)
T 3frx_A 77 GAYALSASWD-----KTLRLWDVATGETYQRFVG--H-KSDVMSVDIDKKASMIISGSRDK-----TIKVWTIKGQCLAT 143 (319)
T ss_dssp SSEEEEEETT-----SEEEEEETTTTEEEEEEEC--C-SSCEEEEEECTTSCEEEEEETTS-----CEEEEETTSCEEEE
T ss_pred CCEEEEEeCC-----CEEEEEECCCCCeeEEEcc--C-CCcEEEEEEcCCCCEEEEEeCCC-----eEEEEECCCCeEEE
Confidence 3345555532 4688899887764331111 0 1111222222 566777777543 47788876554433
Q ss_pred eCCCCCCcceeEEEEE-------CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEc
Q psy14726 427 IAPMNFKRCYVSTAVH-------HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITG 497 (712)
Q Consensus 427 ~~~~~~~r~~~~~~~~-------~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~G 497 (712)
+..-.. .-..+... ++..++.||.+ ..+..||..+.+-.. .+..-.....++.+ ++++++.|
T Consensus 144 ~~~h~~--~v~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~~wd~~~~~~~~--~~~~h~~~v~~~~~sp~g~~l~s~ 214 (319)
T 3frx_A 144 LLGHND--WVSQVRVVPNEKADDDSVTIISAGND-----KMVKAWNLNQFQIEA--DFIGHNSNINTLTASPDGTLIASA 214 (319)
T ss_dssp ECCCSS--CEEEEEECCC------CCEEEEEETT-----SCEEEEETTTTEEEE--EECCCCSCEEEEEECTTSSEEEEE
T ss_pred EeccCC--cEEEEEEccCCCCCCCccEEEEEeCC-----CEEEEEECCcchhhe--eecCCCCcEEEEEEcCCCCEEEEE
Confidence 321111 11122221 23456666643 457888887654321 11111111122223 67788888
Q ss_pred ccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CCEEEEEcCCCCCCccceEEEEeCCCCc-EEEcC-CCCCC
Q psy14726 498 GFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKT-WSQVP-DMYNP 574 (712)
Q Consensus 498 G~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~-~~p~~ 574 (712)
|.++ .+..||..+.+-...-.... .-.+++.. ++.+++.+.. ..+..|+..... +..+. .....
T Consensus 215 ~~dg-----~i~iwd~~~~~~~~~~~~~~--~v~~~~~sp~~~~la~~~~------~~i~v~~~~~~~~~~~~~~~~~~~ 281 (319)
T 3frx_A 215 GKDG-----EIMLWNLAAKKAMYTLSAQD--EVFSLAFSPNRYWLAAATA------TGIKVFSLDPQYLVDDLRPEFAGY 281 (319)
T ss_dssp ETTC-----EEEEEETTTTEEEEEEECCS--CEEEEEECSSSSEEEEEET------TEEEEEEETTEEEEEEECCCCTTC
T ss_pred eCCC-----eEEEEECCCCcEEEEecCCC--cEEEEEEcCCCCEEEEEcC------CCcEEEEeCcCeeeeccCcccccc
Confidence 7664 58888887765322111111 11222222 4444444432 345566655432 22222 11110
Q ss_pred ----ccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCC
Q psy14726 575 ----RSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKT 609 (712)
Q Consensus 575 ----r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~ 609 (712)
......+.+ +++.++.|+.++ .+.+||..+
T Consensus 282 ~~~~~~~v~~~~~spdg~~l~sg~~Dg-----~i~vWd~~t 317 (319)
T 3frx_A 282 SKAAEPHAVSLAWSADGQTLFAGYTDN-----VIRVWQVMT 317 (319)
T ss_dssp CGGGCCCEEEEEECTTSSEEEEEETTS-----CEEEEEEEE
T ss_pred ccCcCcceeEEEECCCCCEEEEeecCc-----eEEEEEEee
Confidence 011112222 778888888766 456666543
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.51 E-value=8.5 Score=37.61 Aligned_cols=227 Identities=11% Similarity=0.031 Sum_probs=104.7
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEECCEEEEEeecCCCCccceEEEEECCCCcEEEe
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEI 427 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 427 (712)
+..++.|+.+ ..+..+|..+++-...... . .........++.+++.|+.+ ..+..++..+......
T Consensus 79 ~~~l~sgs~D-----g~v~iw~~~~~~~~~~~~~--h--~~~~~~~~~~~~~l~s~~~~-----~~~~~~~~~~~~~~~~ 144 (318)
T 4ggc_A 79 GNYLAVGTSS-----AEVQLWDVQQQKRLRNMTS--H--SARVGSLSWNSYILSSGSRS-----GHIHHHDVRVAEHHVA 144 (318)
T ss_dssp SSEEEEEETT-----SEEEEEETTTTEEEEEEEC--C--SSCEEEEEEETTEEEEEETT-----SEEEEEETTSSSCEEE
T ss_pred CCEEEEEECC-----CcEEEeecCCceeEEEecC--c--cceEEEeecCCCEEEEEecC-----CceEeeecCCCceeEE
Confidence 3455666643 3678889888765442111 1 11122233345566666643 2345555554433221
Q ss_pred CCC-CCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceE--EcccCCccccceeEEEE---CC-EEEEEcccC
Q psy14726 428 APM-NFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWS--LIAPMNVERSDASATTL---QG-KIYITGGFN 500 (712)
Q Consensus 428 ~~~-~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~--~~~~~p~~r~~~~~~~~---~~-~iyv~GG~~ 500 (712)
... ............+++.++.|+.+ ..+.+||..+.+-. ................. ++ .+++.+|..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 219 (318)
T 4ggc_A 145 TLSGHSQEVCGLRWAPDGRHLASGGND-----NLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTS 219 (318)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETT-----SCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTT
T ss_pred EEcCccCceEEEEEcCCCCEEEEEecC-----cceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCC
Confidence 111 11111222223355666666644 35778887765321 11111111111111111 22 344444432
Q ss_pred CCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEE
Q psy14726 501 GHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAI 580 (712)
Q Consensus 501 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~ 580 (712)
...+..+|..+..-..................++.+++.+|.. -..+..||..+.+-. ..+......-..
T Consensus 220 ----~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~----d~~i~iwd~~~~~~~--~~l~gH~~~V~~ 289 (318)
T 4ggc_A 220 ----DRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFA----QNQLVIWKYPTMAKV--AELKGHTSRVLS 289 (318)
T ss_dssp ----TCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTT----TCCEEEEETTTCCEE--EEECCCSSCEEE
T ss_pred ----CCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcC----CCEEEEEECCCCcEE--EEEcCCCCCEEE
Confidence 2457778877766544433222222222222245666665532 246888998765432 222211122222
Q ss_pred EEE--CCEEEEEcccCCCceeeeEEEEECC
Q psy14726 581 EVI--DDMIFAIGGFNGVTTIYHVECYDEK 608 (712)
Q Consensus 581 ~~~--~~~i~v~GG~~~~~~~~~v~~yd~~ 608 (712)
+.+ ++.+++.||.++ .+.+||..
T Consensus 290 l~~spdg~~l~S~s~D~-----~v~iWd~~ 314 (318)
T 4ggc_A 290 LTMSPDGATVASAAADE-----TLRLWRCF 314 (318)
T ss_dssp EEECTTSSCEEEEETTT-----EEEEECCS
T ss_pred EEEcCCCCEEEEEecCC-----eEEEEECC
Confidence 233 677888888776 45666653
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=92.48 E-value=6.9 Score=38.94 Aligned_cols=208 Identities=12% Similarity=-0.035 Sum_probs=108.7
Q ss_pred ceEEEEECCCCcEEEeCCCCC------------------CcceeEEEEE--CCeEEEEcccCCCCCCceeEEeecCCCce
Q psy14726 412 NSCRCFNAVTKVWKEIAPMNF------------------KRCYVSTAVH--HDVIYAMGGYNGQRRQNSVEKYNYTENQW 471 (712)
Q Consensus 412 ~~v~~yd~~~~~W~~~~~~~~------------------~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 471 (712)
..+++||+.++++........ ...-++++.- ++.|||.... ..+.++|+.+...
T Consensus 40 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~------~~i~~~d~~~g~~ 113 (322)
T 2fp8_A 40 GRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY------YHLSVVGSEGGHA 113 (322)
T ss_dssp SEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT------TEEEEECTTCEEC
T ss_pred CeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC------CCEEEEeCCCCEE
Confidence 468888888877665431110 0123456655 5799997321 3488899887766
Q ss_pred EEcccCCcc--ccceeEEEE---CCEEEEEcccCC------------CCccCceEEeeCCCCeeEEeC-CCCCCCcceEE
Q psy14726 472 SLIAPMNVE--RSDASATTL---QGKIYITGGFNG------------HNCLNSCEVYDPECNQWTLIE-PMRHRRSGVSC 533 (712)
Q Consensus 472 ~~~~~~p~~--r~~~~~~~~---~~~iyv~GG~~~------------~~~~~~v~~yd~~~~~W~~~~-~~p~~r~~~~~ 533 (712)
+.+...... -.....+.+ +|.||+.-.... ......+++||+.+.+.+.+. .+..+ .++
T Consensus 114 ~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p---~gi 190 (322)
T 2fp8_A 114 TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVP---GGA 190 (322)
T ss_dssp EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEESCC---CEE
T ss_pred EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCccC---cce
Confidence 555332111 111122223 578998643210 012356999999888766543 22221 233
Q ss_pred EEE-C-CEEEEEcCCCCCCccceEEEEeCCC---CcEEEcCCCCCCccceEEEEE-CCEEEEEcccCCC-----ceeeeE
Q psy14726 534 IAY-H-ECIYVIGGFNGMSRMCNGEKYNPVT---KTWSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNGV-----TTIYHV 602 (712)
Q Consensus 534 ~~~-~-~~iyv~GG~~~~~~~~~v~~yd~~~---~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~-----~~~~~v 602 (712)
+.. + +.||+.-.. ...|++||+.. ..++.+..++. -.+++.- +|.|||....... .....+
T Consensus 191 a~~~dg~~lyv~d~~-----~~~I~~~~~~~~~~~~~~~~~~~~g---P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v 262 (322)
T 2fp8_A 191 EVSADSSFVLVAEFL-----SHQIVKYWLEGPKKGTAEVLVKIPN---PGNIKRNADGHFWVSSSEELDGNMHGRVDPKG 262 (322)
T ss_dssp EECTTSSEEEEEEGG-----GTEEEEEESSSTTTTCEEEEEECSS---EEEEEECTTSCEEEEEEEETTSSTTSCEEEEE
T ss_pred EECCCCCEEEEEeCC-----CCeEEEEECCCCcCCccceEEeCCC---CCCeEECCCCCEEEEecCcccccccCCCccEE
Confidence 333 3 358887421 36789999875 34444333322 2233332 5678887432100 112468
Q ss_pred EEEECCCCeEEEccCCCCc---ccceEEEEEcCcceeE
Q psy14726 603 ECYDEKTDEWYEATDMNIY---RSALSACVIMGLPNVY 637 (712)
Q Consensus 603 ~~yd~~~~~W~~~~~~p~~---r~~~~~~~~~~~~~v~ 637 (712)
.+||++...-..+. .|.. ....+++.-++.+|+.
T Consensus 263 ~~~d~~G~~~~~~~-~~~g~~~~~~~~~~~~~g~L~v~ 299 (322)
T 2fp8_A 263 IKFDEFGNILEVIP-LPPPFAGEHFEQIQEHDGLLYIG 299 (322)
T ss_dssp EEECTTSCEEEEEE-CCTTTTTSCCCEEEEETTEEEEE
T ss_pred EEECCCCCEEEEEE-CCCCCccccceEEEEeCCEEEEe
Confidence 99999755444442 2221 1222344456777775
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=92.44 E-value=15 Score=40.29 Aligned_cols=119 Identities=12% Similarity=0.165 Sum_probs=63.8
Q ss_pred CcCCCceEEEEeecCCCCCCceEEEEECCCCc--EEEcccCCCC-CCC---cceEEEEECCEEEEEeecCCCCccceEEE
Q psy14726 343 PRVPHEILFAIGGWSGGSPTDFVETYDTRADR--WVKIEQVDPM-GPR---AYHGTAVIGYNIYVIGGFDGNEYYNSCRC 416 (712)
Q Consensus 343 pr~~~~~i~~~GG~~~~~~~~~v~~~d~~~~~--W~~~~~~~~~-~~r---~~~~~~~~~~~lyv~GG~~~~~~~~~v~~ 416 (712)
|-...+.||+.... +.+.++|..+++ |..-...+.. .+. ...+.++.++.||+... ...++.
T Consensus 64 P~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~------dg~l~A 131 (582)
T 1flg_A 64 AIVSDGVIYVTASY------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL------DASVVA 131 (582)
T ss_dssp CEEETTEEEEEETT------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET------TTEEEE
T ss_pred cEEECCEEEEEcCC------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC------CCEEEE
Confidence 44445666665432 248999987664 8763221110 011 12344567888887532 246999
Q ss_pred EECCCCc--EEEeCCCCCCc--ceeEEEEECC------eEEEEcccCCCCCCceeEEeecCCCc--eEE
Q psy14726 417 FNAVTKV--WKEIAPMNFKR--CYVSTAVHHD------VIYAMGGYNGQRRQNSVEKYNYTENQ--WSL 473 (712)
Q Consensus 417 yd~~~~~--W~~~~~~~~~r--~~~~~~~~~~------~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~ 473 (712)
+|..|++ |+.-...+... ...+-++.++ .||+-.+..+......++.||+.+.+ |+.
T Consensus 132 lD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 132 LNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMR 200 (582)
T ss_dssp EESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEE
T ss_pred EECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeec
Confidence 9999886 87532221111 1112234555 66653221111224579999998765 864
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=91.94 E-value=4.2 Score=40.40 Aligned_cols=177 Identities=16% Similarity=0.205 Sum_probs=90.7
Q ss_pred EECCEEEEEeecCCCCccceEEEEECC-CCcEEEeCCCCCCcceeEEEEE-CCeEEEEcccCCCCCCceeEEeecCCC-c
Q psy14726 394 VIGYNIYVIGGFDGNEYYNSCRCFNAV-TKVWKEIAPMNFKRCYVSTAVH-HDVIYAMGGYNGQRRQNSVEKYNYTEN-Q 470 (712)
Q Consensus 394 ~~~~~lyv~GG~~~~~~~~~v~~yd~~-~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~-~ 470 (712)
+.++.||+... ...+++||+. ...|....+.+. ..+.+.. ++.||+... ...++.||+... .
T Consensus 105 ~~~~~l~v~t~------~~~l~~~d~~g~~~~~~~~~~~~---~~~~~~~~~g~l~vgt~------~~~l~~~d~~g~~~ 169 (330)
T 3hxj_A 105 IFEDILYVTSM------DGHLYAINTDGTEKWRFKTKKAI---YATPIVSEDGTIYVGSN------DNYLYAINPDGTEK 169 (330)
T ss_dssp EETTEEEEECT------TSEEEEECTTSCEEEEEECSSCC---CSCCEECTTSCEEEECT------TSEEEEECTTSCEE
T ss_pred EECCEEEEEec------CCEEEEEcCCCCEEEEEcCCCce---eeeeEEcCCCEEEEEcC------CCEEEEECCCCCEe
Confidence 34888887532 2468999988 334665432221 1222333 678877432 146899998832 3
Q ss_pred eEEcccCCccccceeEEE-ECCEEEEEcccCCCCccCceEEeeCCC-CeeEEeCCCCCCCcceEEEEE-CCEEEEEcCCC
Q psy14726 471 WSLIAPMNVERSDASATT-LQGKIYITGGFNGHNCLNSCEVYDPEC-NQWTLIEPMRHRRSGVSCIAY-HECIYVIGGFN 547 (712)
Q Consensus 471 W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~-~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~ 547 (712)
|..-.+ .... .+.+. -++.||+.. ..+.+||... ..|+...... . ..+.+.. ++.||+...
T Consensus 170 ~~~~~~--~~~~-~~~~~d~~g~l~v~t--------~~l~~~d~~g~~~~~~~~~~~--~-~~~~~~~~~g~l~v~t~-- 233 (330)
T 3hxj_A 170 WRFKTN--DAIT-SAASIGKDGTIYFGS--------DKVYAINPDGTEKWNFYAGYW--T-VTRPAISEDGTIYVTSL-- 233 (330)
T ss_dssp EEEECS--SCCC-SCCEECTTCCEEEES--------SSEEEECTTSCEEEEECCSSC--C-CSCCEECTTSCEEEEET--
T ss_pred EEEecC--CCce-eeeEEcCCCEEEEEe--------CEEEEECCCCcEEEEEccCCc--c-eeceEECCCCeEEEEcC--
Confidence 654322 2211 22223 367788754 3588898442 3476553221 1 1222333 457888642
Q ss_pred CCCccceEEEEeCCCCc-EEEcCCCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCC-eEEE
Q psy14726 548 GMSRMCNGEKYNPVTKT-WSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTD-EWYE 614 (712)
Q Consensus 548 ~~~~~~~v~~yd~~~~~-W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~-~W~~ 614 (712)
...+.+||+.... |..-...+ .. .+.+.. ++.||+... + ..+.+||+... .|..
T Consensus 234 ----~~gl~~~~~~g~~~~~~~~~~~--~~-~~~~~~~~g~l~v~t~-~-----ggl~~~d~~g~~~~~~ 290 (330)
T 3hxj_A 234 ----DGHLYAINPDGTEKWRFKTGKR--IE-SSPVIGNTDTIYFGSY-D-----GHLYAINPDGTEKWNF 290 (330)
T ss_dssp ----TTEEEEECTTSCEEEEEECSSC--CC-SCCEECTTSCEEEECT-T-----CEEEEECTTSCEEEEE
T ss_pred ----CCeEEEECCCCCEeEEeeCCCC--cc-ccceEcCCCeEEEecC-C-----CCEEEECCCCcEEEEE
Confidence 2467888875443 54432211 11 122333 677776532 2 14788887533 4554
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=91.78 E-value=1.7 Score=45.76 Aligned_cols=187 Identities=6% Similarity=0.056 Sum_probs=86.6
Q ss_pred CEEEEEeecCCCCccceEEEEECCCC--------cEEEeCCCCC-CcceeEEEEE-CCe-EEEEcccCCCCCCceeEEee
Q psy14726 397 YNIYVIGGFDGNEYYNSCRCFNAVTK--------VWKEIAPMNF-KRCYVSTAVH-HDV-IYAMGGYNGQRRQNSVEKYN 465 (712)
Q Consensus 397 ~~lyv~GG~~~~~~~~~v~~yd~~~~--------~W~~~~~~~~-~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~v~~yd 465 (712)
+.+++.|+.+ ..+..||..+. ....+..+.. .....+++.. ++. +++.|+.+ ..+..||
T Consensus 141 ~~~lat~~~d-----g~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d-----g~i~vwd 210 (430)
T 2xyi_A 141 ACVIATKTPS-----SDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDD-----HTICLWD 210 (430)
T ss_dssp EEEEEEECSS-----SCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTT-----SCEEEEE
T ss_pred CcEEEEECCC-----CcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCC-----CeEEEEe
Confidence 4566776643 35888887652 1111111111 1111223332 334 67777654 4588888
Q ss_pred cCCC---ceEE--cccCCccccceeEEEE---CCEEEEEcccCCCCccCceEEeeCCCCe-eEEeCCCCCCCcceEEEEE
Q psy14726 466 YTEN---QWSL--IAPMNVERSDASATTL---QGKIYITGGFNGHNCLNSCEVYDPECNQ-WTLIEPMRHRRSGVSCIAY 536 (712)
Q Consensus 466 ~~~~---~W~~--~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~~~p~~r~~~~~~~~ 536 (712)
+.+. .+.. ...+.........+.+ ++.+++.|+.+ ..+.+||..+.. ...+..+........++.+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~ 285 (430)
T 2xyi_A 211 INATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADD-----QKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSF 285 (430)
T ss_dssp TTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETT-----SEEEEEETTCSCSSSCSEEEECCSSCEEEEEE
T ss_pred CCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCC-----CeEEEEECCCCCCCcceeEeecCCCCeEEEEe
Confidence 8762 2221 1111111111222223 46677777655 468889887652 1111111111122223333
Q ss_pred --CC-EEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE---CCEEEEEcccCCCceeeeEEEEECCC
Q psy14726 537 --HE-CIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI---DDMIFAIGGFNGVTTIYHVECYDEKT 609 (712)
Q Consensus 537 --~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~v~~yd~~~ 609 (712)
++ .+++.|+.+ ..+..||..+.. ..+..+.........+.+ +..+++.||.++ .+.+||...
T Consensus 286 ~p~~~~~l~tg~~d-----g~v~vwd~~~~~-~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~-----~i~iwd~~~ 353 (430)
T 2xyi_A 286 NPYSEFILATGSAD-----KTVALWDLRNLK-LKLHSFESHKDEIFQVQWSPHNETILASSGTDR-----RLHVWDLSK 353 (430)
T ss_dssp CSSCTTEEEEEETT-----SEEEEEETTCTT-SCSEEEECCSSCEEEEEECSSCTTEEEEEETTS-----CCEEEEGGG
T ss_pred CCCCCCEEEEEeCC-----CeEEEEeCCCCC-CCeEEeecCCCCEEEEEECCCCCCEEEEEeCCC-----cEEEEeCCC
Confidence 23 478888764 468899987531 001111111111222233 335788888665 466777654
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=91.76 E-value=11 Score=37.43 Aligned_cols=213 Identities=9% Similarity=-0.038 Sum_probs=118.2
Q ss_pred eEEEEECCCCcEEEcccCCCCCCCcceEEEEE--CCEEEEEeecCCCCccceEEEEECCC----CcEEEe-C-CCCCCcc
Q psy14726 364 FVETYDTRADRWVKIEQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVT----KVWKEI-A-PMNFKRC 435 (712)
Q Consensus 364 ~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~----~~W~~~-~-~~~~~r~ 435 (712)
.|..+|........+. +....-+++++. ++.||+.... ...++++|+.. .....+ + .+..|
T Consensus 11 ~I~~i~~~~~~~~~~~----~~~~~p~g~~~d~~~~~ly~~D~~-----~~~I~~~~~~g~~~~~~~~~~~~~~~~~p-- 79 (316)
T 1ijq_A 11 EVRKMTLDRSEYTSLI----PNLRNVVALDTEVASNRIYWSDLS-----QRMICSTQLDRAHGVSSYDTVISRDIQAP-- 79 (316)
T ss_dssp SEEEEETTSCCCEEEE----CSCSSEEEEEEETTTTEEEEEETT-----TTEEEEEEC--------CEEEECSSCSCC--
T ss_pred eEEEEECCCcceEehh----cCCCceEEEEEEeCCCEEEEEECC-----CCcEEEEECCCCCCCcccEEEEeCCCCCc--
Confidence 4667787776655431 122334566665 5789988642 35789999876 222222 1 22222
Q ss_pred eeEEEE--ECCeEEEEcccCCCCCCceeEEeecCCCceEEcc--cCCccccceeEEEE--CCEEEEEcccCCCCccCceE
Q psy14726 436 YVSTAV--HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA--PMNVERSDASATTL--QGKIYITGGFNGHNCLNSCE 509 (712)
Q Consensus 436 ~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~ 509 (712)
.++++ .+++||+.-.. .+.++++|+....-..+. .+..+ .+.++- ++.||+..... ...++
T Consensus 80 -~glavd~~~~~ly~~d~~-----~~~I~~~~~~g~~~~~~~~~~~~~P---~~iavdp~~g~ly~~d~~~----~~~I~ 146 (316)
T 1ijq_A 80 -DGLAVDWIHSNIYWTDSV-----LGTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWGT----PAKIK 146 (316)
T ss_dssp -CEEEEETTTTEEEEEETT-----TTEEEEEETTSSSEEEEEECTTCCE---EEEEEETTTTEEEEEECSS----SCEEE
T ss_pred -CEEEEeecCCeEEEEECC-----CCEEEEEeCCCCceEEEEECCCCCc---ceEEeCCCCCEEEEEccCC----CCeEE
Confidence 34444 47899997331 357899998765443332 22222 233332 68999875311 25789
Q ss_pred EeeCCCCeeEEeCCCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCC-CCCccceEEEEECCE
Q psy14726 510 VYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDM-YNPRSNFAIEVIDDM 586 (712)
Q Consensus 510 ~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-p~~r~~~~~~~~~~~ 586 (712)
++++....-+.+..-.. ..-.+++.- +++||+.-.. ...|+++|+....-..+... .....-.++++.++.
T Consensus 147 ~~~~dG~~~~~~~~~~~-~~P~gla~d~~~~~lY~~D~~-----~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~ 220 (316)
T 1ijq_A 147 KGGLNGVDIYSLVTENI-QWPNGITLDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDK 220 (316)
T ss_dssp EEETTSCCEEEEECSSC-SCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTE
T ss_pred EEcCCCCCeEEEEECCC-CCceEEEEeccCCEEEEEECC-----CCeEEEEecCCCceEEEeecCCccCCcEEEEEECCE
Confidence 99886544333322111 122234443 6899998543 36899999875433333211 112233567777899
Q ss_pred EEEEcccCCCceeeeEEEEECCCCe
Q psy14726 587 IFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 587 i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
+|+.-.. ...|.++|+.+++
T Consensus 221 ly~~d~~-----~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 221 VFWTDII-----NEAIFSANRLTGS 240 (316)
T ss_dssp EEEEETT-----TTEEEEEETTTCC
T ss_pred EEEEECC-----CCeEEEEeCCCCc
Confidence 9998532 2368999987654
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=91.75 E-value=0.77 Score=48.45 Aligned_cols=146 Identities=12% Similarity=0.083 Sum_probs=77.8
Q ss_pred CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE---CCEEEEEcccCCCCccCceEEeeCCCCeeE
Q psy14726 443 HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL---QGKIYITGGFNGHNCLNSCEVYDPECNQWT 519 (712)
Q Consensus 443 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 519 (712)
++.+++.|+.+ ..|.+||..+..-..+-....-...-.++.+ ++.+++.||.++ +|-++|.+++...
T Consensus 131 ~~~~lasGs~d-----g~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~-----~v~iwd~~~~~~~ 200 (435)
T 4e54_B 131 HPSTVAVGSKG-----GDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEG-----TTRLQDFKGNILR 200 (435)
T ss_dssp CTTCEEEEETT-----SCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSS-----CEEEEETTSCEEE
T ss_pred CCCEEEEEeCC-----CEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCC-----EEEEeeccCCcee
Confidence 45677777754 3578888877654333222111111122232 566777777664 5788898887766
Q ss_pred EeCCCCCCCc-ceEE-EEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE---CCEEEEEcccC
Q psy14726 520 LIEPMRHRRS-GVSC-IAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI---DDMIFAIGGFN 594 (712)
Q Consensus 520 ~~~~~p~~r~-~~~~-~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~i~v~GG~~ 594 (712)
.+........ ..++ ..-++.+++.|+.+ ..+..||..... +..+.........+.+ ++.+++.||.+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d-----g~i~~wd~~~~~---~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d 272 (435)
T 4e54_B 201 VFASSDTINIWFCSLDVSASSRMVVTGDNV-----GNVILLNMDGKE---LWNLRMHKKKVTHVALNPCCDWFLATASVD 272 (435)
T ss_dssp EEECCSSCSCCCCCEEEETTTTEEEEECSS-----SBEEEEESSSCB---CCCSBCCSSCEEEEEECTTCSSEEEEEETT
T ss_pred EEeccCCCCccEEEEEECCCCCEEEEEeCC-----CcEeeeccCcce---eEEEecccceEEeeeecCCCceEEEEecCc
Confidence 5543221111 1222 22367778888754 467888876543 2222211222223333 34577778766
Q ss_pred CCceeeeEEEEECCCCe
Q psy14726 595 GVTTIYHVECYDEKTDE 611 (712)
Q Consensus 595 ~~~~~~~v~~yd~~~~~ 611 (712)
+ .+.+||..+..
T Consensus 273 ~-----~v~iwd~~~~~ 284 (435)
T 4e54_B 273 Q-----TVKIWDLRQVR 284 (435)
T ss_dssp S-----BCCEEETTTCC
T ss_pred c-----eeeEEeccccc
Confidence 5 45677776543
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=91.60 E-value=11 Score=37.74 Aligned_cols=141 Identities=11% Similarity=0.134 Sum_probs=69.3
Q ss_pred CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEE
Q psy14726 443 HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTL 520 (712)
Q Consensus 443 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 520 (712)
++.+.+.|+.+ ..+..||..+.+.... +..-.....++.+ +++.++.||.++ .+..||.....-..
T Consensus 87 ~~~~l~s~s~D-----~~v~lwd~~~~~~~~~--~~~h~~~v~~v~~sp~~~~l~s~~~d~-----~i~~wd~~~~~~~~ 154 (343)
T 2xzm_R 87 ENCFAISSSWD-----KTLRLWDLRTGTTYKR--FVGHQSEVYSVAFSPDNRQILSAGAER-----EIKLWNILGECKFS 154 (343)
T ss_dssp STTEEEEEETT-----SEEEEEETTSSCEEEE--EECCCSCEEEEEECSSTTEEEEEETTS-----CEEEEESSSCEEEE
T ss_pred CCCEEEEEcCC-----CcEEEEECCCCcEEEE--EcCCCCcEEEEEECCCCCEEEEEcCCC-----EEEEEeccCCceee
Confidence 45666777654 4688899887754321 1111111122233 566677777653 57777776443222
Q ss_pred eCCCCCCCcceEEEEEC------------CEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE--CCE
Q psy14726 521 IEPMRHRRSGVSCIAYH------------ECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDM 586 (712)
Q Consensus 521 ~~~~p~~r~~~~~~~~~------------~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~ 586 (712)
............++.+. +.+++.|+.+ ..+..||.....-..+... ......+.+ +++
T Consensus 155 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~h---~~~v~~~~~s~~g~ 226 (343)
T 2xzm_R 155 SAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWD-----GRLKVWNTNFQIRYTFKAH---ESNVNHLSISPNGK 226 (343)
T ss_dssp CCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETT-----SEEEEEETTTEEEEEEECC---SSCEEEEEECTTSS
T ss_pred eecccCCCceeeeeeeccccccccccCCCCCEEEEEcCC-----CEEEEEcCCCceeEEEcCc---cccceEEEECCCCC
Confidence 22111111122222221 1456666654 4677788432211111111 111222223 677
Q ss_pred EEEEcccCCCceeeeEEEEECC
Q psy14726 587 IFAIGGFNGVTTIYHVECYDEK 608 (712)
Q Consensus 587 i~v~GG~~~~~~~~~v~~yd~~ 608 (712)
.++.||.++ .+.+||+.
T Consensus 227 ~l~sgs~dg-----~v~iwd~~ 243 (343)
T 2xzm_R 227 YIATGGKDK-----KLLIWDIL 243 (343)
T ss_dssp EEEEEETTC-----EEEEEESS
T ss_pred EEEEEcCCC-----eEEEEECC
Confidence 888888765 57788873
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=91.59 E-value=3.1 Score=45.89 Aligned_cols=119 Identities=12% Similarity=0.108 Sum_probs=70.3
Q ss_pred EEEECCeEEEEcccCCCCCCceeEEeec-CCC--ceEEcccCCc-----cc---cceeEEE--ECCE----EEEEcccCC
Q psy14726 439 TAVHHDVIYAMGGYNGQRRQNSVEKYNY-TEN--QWSLIAPMNV-----ER---SDASATT--LQGK----IYITGGFNG 501 (712)
Q Consensus 439 ~~~~~~~iyv~GG~~~~~~~~~v~~yd~-~~~--~W~~~~~~p~-----~r---~~~~~~~--~~~~----iyv~GG~~~ 501 (712)
-++.++.||+.+.. ...++.+|. .+. .|+.-...+. .+ ...+.++ .+++ ||+...
T Consensus 58 P~v~~g~vyv~~~~-----~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~--- 129 (599)
T 1w6s_A 58 PLVVDGKMYIHTSF-----PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL--- 129 (599)
T ss_dssp CEEETTEEEEECST-----TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT---
T ss_pred cEEECCEEEEEeCC-----CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC---
Confidence 45679999998652 246899998 665 4886543321 11 1123444 5677 887542
Q ss_pred CCccCceEEeeCCCCe--eEEeCCCCCC--CcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCc--EEEc
Q psy14726 502 HNCLNSCEVYDPECNQ--WTLIEPMRHR--RSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKT--WSQV 568 (712)
Q Consensus 502 ~~~~~~v~~yd~~~~~--W~~~~~~p~~--r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~ 568 (712)
-..+..+|..|++ |+.-..-+.. ....+-++.++.+|+.++.........+..||.++.+ |+.-
T Consensus 130 ---dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~ 199 (599)
T 1w6s_A 130 ---DGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAY 199 (599)
T ss_dssp ---TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred ---CCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEc
Confidence 2468999988876 8764321100 1122234568888775432111124679999998764 8765
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=91.56 E-value=19 Score=39.59 Aligned_cols=189 Identities=8% Similarity=0.070 Sum_probs=99.8
Q ss_pred EEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeC
Q psy14726 350 LFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIA 428 (712)
Q Consensus 350 i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 428 (712)
.++.|+.+ ..+..+|....+.... ... ....-.++++. ++.+++.||.+ ..+..+|..+++....-
T Consensus 162 ~l~s~s~D-----~~v~lwd~~~~~~~~~--l~~-H~~~V~~v~fspdg~~las~s~D-----~~i~lwd~~~g~~~~~~ 228 (611)
T 1nr0_A 162 RIISGSDD-----NTVAIFEGPPFKFKST--FGE-HTKFVHSVRYNPDGSLFASTGGD-----GTIVLYNGVDGTKTGVF 228 (611)
T ss_dssp EEEEEETT-----SCEEEEETTTBEEEEE--ECC-CSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCCEEEEC
T ss_pred EEEEEeCC-----CeEEEEECCCCeEeee--ecc-ccCceEEEEECCCCCEEEEEECC-----CcEEEEECCCCcEeeee
Confidence 45666643 3467778666554331 110 11122233333 67788888854 35888998877654321
Q ss_pred -CC-----CCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCcc-ccceeEEEECCEEEEEcccC
Q psy14726 429 -PM-----NFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVE-RSDASATTLQGKIYITGGFN 500 (712)
Q Consensus 429 -~~-----~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~ 500 (712)
.. .....-.+++. -+++.++.||.+ ..+..||..+.+....-..... ......+..++..++.++.+
T Consensus 229 ~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D-----~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d 303 (611)
T 1nr0_A 229 EDDSLKNVAHSGSVFGLTWSPDGTKIASASAD-----KTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISAN 303 (611)
T ss_dssp BCTTSSSCSSSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETT
T ss_pred ccccccccccCCCEEEEEECCCCCEEEEEeCC-----CeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCC
Confidence 11 11111122333 267777877754 5688999988776433222211 11222334466666666655
Q ss_pred CCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCcEEEc
Q psy14726 501 GHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQV 568 (712)
Q Consensus 501 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 568 (712)
+ .+..+|+.+.+-... +.........+.+ +++.++.|+.+ ..+..||..+......
T Consensus 304 ~-----~i~~~~~~~~~~~~~--~~gh~~~v~~l~~spdg~~l~s~s~D-----~~v~~Wd~~~~~~~~~ 361 (611)
T 1nr0_A 304 G-----FINFVNPELGSIDQV--RYGHNKAITALSSSADGKTLFSADAE-----GHINSWDISTGISNRV 361 (611)
T ss_dssp C-----CEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCCEEEC
T ss_pred C-----cEEEEeCCCCCcceE--EcCCCCCEEEEEEeCCCCEEEEEeCC-----CcEEEEECCCCceeee
Confidence 3 477788877653222 1111111222222 56667777754 4678899988766554
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=91.56 E-value=3.8 Score=40.53 Aligned_cols=195 Identities=9% Similarity=-0.007 Sum_probs=98.9
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 474 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 474 (712)
++.||+.+.. ...+++||+ +++...+.... . ...+++. -+|++|+.... ...+.+||+. .+.+.+
T Consensus 56 g~~l~~~d~~-----~~~i~~~~~-~g~~~~~~~~~-~-~~~gl~~d~dG~l~v~~~~-----~~~v~~~~~~-g~~~~~ 121 (305)
T 3dr2_A 56 QRTLVWSDLV-----GRRVLGWRE-DGTVDVLLDAT-A-FTNGNAVDAQQRLVHCEHG-----RRAITRSDAD-GQAHLL 121 (305)
T ss_dssp GTEEEEEETT-----TTEEEEEET-TSCEEEEEESC-S-CEEEEEECTTSCEEEEETT-----TTEEEEECTT-SCEEEE
T ss_pred CCEEEEEECC-----CCEEEEEeC-CCCEEEEeCCC-C-ccceeeECCCCCEEEEECC-----CCEEEEECCC-CCEEEE
Confidence 3457776542 246888988 45544432211 1 1223333 36788886321 1468899986 666655
Q ss_pred ccCCcc-c---cceeEEEECCEEEEE----cccCC--------CCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-C
Q psy14726 475 APMNVE-R---SDASATTLQGKIYIT----GGFNG--------HNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-H 537 (712)
Q Consensus 475 ~~~p~~-r---~~~~~~~~~~~iyv~----GG~~~--------~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~ 537 (712)
...... + ....++.-+|++|+. |-... ......+++||+.+++++.+. .... -.+.+.. +
T Consensus 122 ~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~-p~gl~~spd 198 (305)
T 3dr2_A 122 VGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDH-PNGLAFSPD 198 (305)
T ss_dssp ECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESS-EEEEEECTT
T ss_pred EeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCC-CcceEEcCC
Confidence 332111 1 111122227889986 43211 112357999999888887764 1111 1223333 3
Q ss_pred C-EEEEEcCCCCCCccceEEEEeCCCCcEEE---cCCCCCCccceEEEE-ECCEEEEEcccCCCceeeeEEEEECCCCeE
Q psy14726 538 E-CIYVIGGFNGMSRMCNGEKYNPVTKTWSQ---VPDMYNPRSNFAIEV-IDDMIFAIGGFNGVTTIYHVECYDEKTDEW 612 (712)
Q Consensus 538 ~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~---~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 612 (712)
+ .||+............+++||...+.... ....+.. .-.+++. -++.||+..+ +.|.+||++...-
T Consensus 199 g~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~-~pdgi~~d~~G~lwv~~~-------~gv~~~~~~g~~~ 270 (305)
T 3dr2_A 199 EQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDG-LPDGFCVDRGGWLWSSSG-------TGVCVFDSDGQLL 270 (305)
T ss_dssp SSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSS-CCCSEEECTTSCEEECCS-------SEEEEECTTSCEE
T ss_pred CCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCC-CCCeEEECCCCCEEEecC-------CcEEEECCCCCEE
Confidence 4 58887542111112578999887654221 1111111 1112222 2667777642 2489999976655
Q ss_pred EEc
Q psy14726 613 YEA 615 (712)
Q Consensus 613 ~~~ 615 (712)
..+
T Consensus 271 ~~~ 273 (305)
T 3dr2_A 271 GHI 273 (305)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=91.56 E-value=8.2 Score=38.05 Aligned_cols=185 Identities=7% Similarity=-0.037 Sum_probs=94.0
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCC----Cccee
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNF----KRCYV 437 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~----~r~~~ 437 (712)
..+..|++. +....+... .....+++.. ++++|+.... ...+.+||+. ++...+..... .+...
T Consensus 67 ~~i~~~~~~-g~~~~~~~~----~~~~~gl~~d~dG~l~v~~~~-----~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~ 135 (305)
T 3dr2_A 67 RRVLGWRED-GTVDVLLDA----TAFTNGNAVDAQQRLVHCEHG-----RRAITRSDAD-GQAHLLVGRYAGKRLNSPND 135 (305)
T ss_dssp TEEEEEETT-SCEEEEEES----CSCEEEEEECTTSCEEEEETT-----TTEEEEECTT-SCEEEEECEETTEECSCCCC
T ss_pred CEEEEEeCC-CCEEEEeCC----CCccceeeECCCCCEEEEECC-----CCEEEEECCC-CCEEEEEeccCCCccCCCCC
Confidence 457788874 444432211 1122334433 6777766321 2468899986 66665532211 11122
Q ss_pred EEEEECCeEEEE----cccCC--------CCCCceeEEeecCCCceEEcccCCccccceeEEEE-CC-EEEEEcccCCCC
Q psy14726 438 STAVHHDVIYAM----GGYNG--------QRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL-QG-KIYITGGFNGHN 503 (712)
Q Consensus 438 ~~~~~~~~iyv~----GG~~~--------~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~ 503 (712)
.++.-+|.||+. |-... ......+++||+.+.+++.+. .... ..+.+.- ++ .||+........
T Consensus 136 i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~-p~gl~~spdg~~lyv~~~~~~~~ 212 (305)
T 3dr2_A 136 LIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDH-PNGLAFSPDEQTLYVSQTPEQGH 212 (305)
T ss_dssp EEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESS-EEEEEECTTSSEEEEEECCC---
T ss_pred EEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCC-CcceEEcCCCCEEEEEecCCcCC
Confidence 333347889985 32110 112367999999988887664 1111 1122222 44 588875432111
Q ss_pred ccCceEEeeCCCCeeEEe---CCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEc
Q psy14726 504 CLNSCEVYDPECNQWTLI---EPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQV 568 (712)
Q Consensus 504 ~~~~v~~yd~~~~~W~~~---~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 568 (712)
..+.+++||...+..... ...+......-++--++.||+..+ ..|.+||++......+
T Consensus 213 ~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~-------~gv~~~~~~g~~~~~~ 273 (305)
T 3dr2_A 213 GSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSG-------TGVCVFDSDGQLLGHI 273 (305)
T ss_dssp CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCS-------SEEEEECTTSCEEEEE
T ss_pred CCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecC-------CcEEEECCCCCEEEEE
Confidence 135789998876543211 111111111112223577887653 3599999976655555
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=91.54 E-value=6.9 Score=41.02 Aligned_cols=114 Identities=9% Similarity=-0.067 Sum_probs=61.3
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE--CCEEEEEeecC----CCCccceEEEEECCC
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI--GYNIYVIGGFD----GNEYYNSCRCFNAVT 421 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~----~~~~~~~v~~yd~~~ 421 (712)
..+|+.-....... +.+..+|+.+++-... . +..... ++++. +..+|+.--.. .+...+.+..+|+.+
T Consensus 85 ~~vyV~n~~~~~~~-~~VsVID~~t~~vv~~--I--~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t 158 (426)
T 3c75_H 85 RRVYIQDPAHFAAI-TQQFVIDGSTGRILGM--T--DGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVT 158 (426)
T ss_dssp TEEEEEECTTTCSS-EEEEEEETTTTEEEEE--E--EECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred CEEEEECCCcCCCC-CeEEEEECCCCEEEEE--E--ECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCC
Confidence 56777654221111 6899999998875531 1 112222 44444 56788774210 011235799999999
Q ss_pred CcEEEeCCCC-CCc-----ceeEEEE-E-CCeEEEEcccCCCCCCceeEEeecCCCce
Q psy14726 422 KVWKEIAPMN-FKR-----CYVSTAV-H-HDVIYAMGGYNGQRRQNSVEKYNYTENQW 471 (712)
Q Consensus 422 ~~W~~~~~~~-~~r-----~~~~~~~-~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 471 (712)
++-..--+++ .+| .-+.+++ - +.++||..- ...+.+.++|+.+++=
T Consensus 159 ~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~----~~~~~VsVID~~t~kv 212 (426)
T 3c75_H 159 FLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQF----SPAPAVGVVDLEGKTF 212 (426)
T ss_dssp CCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEEC----SSSCEEEEEETTTTEE
T ss_pred CcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEec----CCCCeEEEEECCCCeE
Confidence 8754321122 111 1223333 2 347888631 1236799999888763
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=91.45 E-value=3.8 Score=44.96 Aligned_cols=198 Identities=8% Similarity=-0.022 Sum_probs=103.5
Q ss_pred CEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEE-CC-eEEEEcccCCCCCCceeEEeecCCCceEEc
Q psy14726 397 YNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH-HD-VIYAMGGYNGQRRQNSVEKYNYTENQWSLI 474 (712)
Q Consensus 397 ~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 474 (712)
+.+||.... .+.+..+|+.+++-... ++....-|.++.. +| .+|+.+. ...+..||+.+.+-+.+
T Consensus 167 ~~~~V~~~~-----~~~V~viD~~t~~v~~~--i~~g~~p~~v~~SpDGr~lyv~~~------dg~V~viD~~~~t~~~v 233 (567)
T 1qks_A 167 NLFSVTLRD-----AGQIALIDGSTYEIKTV--LDTGYAVHISRLSASGRYLFVIGR------DGKVNMIDLWMKEPTTV 233 (567)
T ss_dssp GEEEEEETT-----TTEEEEEETTTCCEEEE--EECSSCEEEEEECTTSCEEEEEET------TSEEEEEETTSSSCCEE
T ss_pred ceEEEEeCC-----CCeEEEEECCCCeEEEE--EeCCCCccceEECCCCCEEEEEcC------CCeEEEEECCCCCCcEe
Confidence 456666542 35799999998865422 2223333444443 34 6777542 24799999862232334
Q ss_pred ccCCccccceeEEEE-----CC-EEEEEcccCCCCccCceEEeeCCCCeeEEe-C--CC--------CCCCcceEEEEEC
Q psy14726 475 APMNVERSDASATTL-----QG-KIYITGGFNGHNCLNSCEVYDPECNQWTLI-E--PM--------RHRRSGVSCIAYH 537 (712)
Q Consensus 475 ~~~p~~r~~~~~~~~-----~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~--~~--------p~~r~~~~~~~~~ 537 (712)
..++.+..-..++.- +| .+|+..-. .+++.++|..+.+=... + .+ |.+|.....+..+
T Consensus 234 ~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~-----~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~ 308 (567)
T 1qks_A 234 AEIKIGSEARSIETSKMEGWEDKYAIAGAYW-----PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHY 308 (567)
T ss_dssp EEEECCSEEEEEEECCSTTCTTTEEEEEEEE-----TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSS
T ss_pred EEEecCCCCceeEEccccCCCCCEEEEEEcc-----CCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCC
Confidence 444433322333333 45 56665432 25678889777653222 1 11 1233333222333
Q ss_pred CEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE-CCE-EEEEcccCCCceeeeEEEEECCCCeEE--
Q psy14726 538 ECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DDM-IFAIGGFNGVTTIYHVECYDEKTDEWY-- 613 (712)
Q Consensus 538 ~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-i~v~GG~~~~~~~~~v~~yd~~~~~W~-- 613 (712)
+..+++-- .....++..|........+...+..+..|....- +++ +|+... ..+.+.++|.++++=.
T Consensus 309 ~~~~vv~~----~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~-----~sn~V~ViD~~t~kl~~~ 379 (567)
T 1qks_A 309 RPEFIVNV----KETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAAN-----ARNKLVVIDTKEGKLVAI 379 (567)
T ss_dssp SSEEEEEE----TTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEG-----GGTEEEEEETTTTEEEEE
T ss_pred CCEEEEEe----cCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeC-----CCCeEEEEECCCCcEEEE
Confidence 33333321 1136788888877665555555556666655443 444 444432 1347899999988643
Q ss_pred -Ec-cCCCCc
Q psy14726 614 -EA-TDMNIY 621 (712)
Q Consensus 614 -~~-~~~p~~ 621 (712)
.+ +.+|++
T Consensus 380 i~vgg~~Php 389 (567)
T 1qks_A 380 EDTGGQTPHP 389 (567)
T ss_dssp EECSSSSBCC
T ss_pred EeccCcCCCC
Confidence 23 445554
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=91.41 E-value=12 Score=38.21 Aligned_cols=178 Identities=11% Similarity=0.170 Sum_probs=90.0
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCC--cceEEEEE--CCEEEEEeecCCCCccceEEEEECCCCc--EEEeCCCCCCcce
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPR--AYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKV--WKEIAPMNFKRCY 436 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r--~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~~~~r~~ 436 (712)
..+..+|..+++-...-....+... .-.+++.. ++.+++.|+.++ .+..||..... ...+..- ... -
T Consensus 180 ~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~-----~v~~wd~~~~~~~~~~~~~h-~~~-v 252 (380)
T 3iz6_a 180 QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDT-----TVRLWDLRITSRAVRTYHGH-EGD-I 252 (380)
T ss_dssp SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTS-----CEEEEETTTTCCCCEEECCC-SSC-C
T ss_pred CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCC-----eEEEEECCCCCcceEEECCc-CCC-e
Confidence 3577888887765542222222111 11122221 567888888653 57888876321 1222111 111 1
Q ss_pred eEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccc-----cceeEEEE--CCEEEEEcccCCCCccCce
Q psy14726 437 VSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVER-----SDASATTL--QGKIYITGGFNGHNCLNSC 508 (712)
Q Consensus 437 ~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r-----~~~~~~~~--~~~iyv~GG~~~~~~~~~v 508 (712)
.+++. .++..++.|+.+ ..+..||..+..-...-.....+ ....++.+ ++++++.|+.++ .+
T Consensus 253 ~~v~~~p~~~~l~s~s~D-----~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg-----~i 322 (380)
T 3iz6_a 253 NSVKFFPDGQRFGTGSDD-----GTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNG-----DC 322 (380)
T ss_dssp CEEEECTTSSEEEEECSS-----SCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTS-----CE
T ss_pred EEEEEecCCCeEEEEcCC-----CeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCC-----CE
Confidence 12332 356777877754 45888998876543221111111 11122333 677777777653 58
Q ss_pred EEeeCCCCeeEE-eCCCCCC---CcceEEEEECCEEEEEcCCCCCCccceEEEEeCCC
Q psy14726 509 EVYDPECNQWTL-IEPMRHR---RSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVT 562 (712)
Q Consensus 509 ~~yd~~~~~W~~-~~~~p~~---r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~ 562 (712)
.+||..+.+-.. +..+... +....+..-++..++.||.+ ..+..||...
T Consensus 323 ~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D-----~~i~iW~~~~ 375 (380)
T 3iz6_a 323 YVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWD-----KNLKIWAFSG 375 (380)
T ss_dssp EEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTT-----SCEEEEECCS
T ss_pred EEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCC-----CCEEEEecCC
Confidence 889987765432 2222211 11222223367788888865 3556666553
|
| >3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata} | Back alignment and structure |
|---|
Probab=91.33 E-value=1.5 Score=41.54 Aligned_cols=99 Identities=14% Similarity=0.148 Sum_probs=59.5
Q ss_pred ECCeEEEEcccCCCCCCceeEEeecCC----CceEEc--------ccCCcc--ccceeEEEE---CCEEEEEcccCCCCc
Q psy14726 442 HHDVIYAMGGYNGQRRQNSVEKYNYTE----NQWSLI--------APMNVE--RSDASATTL---QGKIYITGGFNGHNC 504 (712)
Q Consensus 442 ~~~~iyv~GG~~~~~~~~~v~~yd~~~----~~W~~~--------~~~p~~--r~~~~~~~~---~~~iyv~GG~~~~~~ 504 (712)
.+|++|+|=| +.+|+||..+ +....- +.+|.. ...--|+.. ++++|.+-|
T Consensus 69 ~~g~~~fFkg-------~~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~IDAA~~~~~~gk~yfFkG------ 135 (225)
T 3oyo_A 69 EASEAYVFSG-------NHSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSIDSAFRSTKGKEVYLFKG------ 135 (225)
T ss_dssp STTEEEEEET-------TEEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCCEEEECSSTTEEEEEET------
T ss_pred CCCeEEEEcC-------CEEEEEecccccCCCceecCchhhhhcCCCCCCcccccccceEEEECCCCcEEEEeC------
Confidence 5899999977 5788887532 222111 123321 012223332 689999987
Q ss_pred cCceEEeeCCCCeeEEe----C-CCCC------CCcceEEEE--ECCEEEEEcCCCCCCccceEEEEeCC
Q psy14726 505 LNSCEVYDPECNQWTLI----E-PMRH------RRSGVSCIA--YHECIYVIGGFNGMSRMCNGEKYNPV 561 (712)
Q Consensus 505 ~~~v~~yd~~~~~W~~~----~-~~p~------~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~ 561 (712)
+..|+||..+++...- . ..|. +..--++.. .++++|++-| +..|+||..
T Consensus 136 -~~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG-------~~ywr~d~~ 197 (225)
T 3oyo_A 136 -NKYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKG-------QNYVRIDFT 197 (225)
T ss_dssp -TEEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEET-------TEEEEEECC
T ss_pred -CeEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEEC-------CEEEEEeCC
Confidence 5689999777665431 1 1221 222334444 3789999987 578999987
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=91.13 E-value=11 Score=36.14 Aligned_cols=178 Identities=9% Similarity=0.017 Sum_probs=99.4
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEE--CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEE
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTA 440 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~ 440 (712)
..|..+++....-..+..... ..-+++++. ++.||+.-.. ...+.++|+....-..+......+ -..++
T Consensus 58 ~~I~~~~~~g~~~~~~~~~~~---~~p~~ia~d~~~~~lyv~d~~-----~~~I~~~~~~g~~~~~~~~~~~~~-P~~i~ 128 (267)
T 1npe_A 58 PSIGRASLHGGEPTTIIRQDL---GSPEGIALDHLGRTIFWTDSQ-----LDRIEVAKMDGTQRRVLFDTGLVN-PRGIV 128 (267)
T ss_dssp TEEEEEESSSCCCEEEECTTC---CCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECSSCSS-EEEEE
T ss_pred CEEEEEecCCCCcEEEEECCC---CCccEEEEEecCCeEEEEECC-----CCEEEEEEcCCCCEEEEEECCCCC-ccEEE
Confidence 468888887654332211111 233556665 5789988542 357889998765433332211112 23444
Q ss_pred EE--CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCC
Q psy14726 441 VH--HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECN 516 (712)
Q Consensus 441 ~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~ 516 (712)
+- +++||+..... ....++++++....-..+..... ..-.+++.- +++||+.-.. .+.+.+||+...
T Consensus 129 vd~~~g~lyv~~~~~---~~~~I~~~~~dg~~~~~~~~~~~-~~P~gia~d~~~~~lyv~d~~-----~~~I~~~~~~g~ 199 (267)
T 1npe_A 129 TDPVRGNLYWTDWNR---DNPKIETSHMDGTNRRILAQDNL-GLPNGLTFDAFSSQLCWVDAG-----THRAECLNPAQP 199 (267)
T ss_dssp EETTTTEEEEEECCS---SSCEEEEEETTSCCCEEEECTTC-SCEEEEEEETTTTEEEEEETT-----TTEEEEEETTEE
T ss_pred EeeCCCEEEEEECCC---CCcEEEEEecCCCCcEEEEECCC-CCCcEEEEcCCCCEEEEEECC-----CCEEEEEecCCC
Confidence 43 68999975321 13578888876554333322111 111233332 5789997642 357999998764
Q ss_pred eeEEe-CCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEE
Q psy14726 517 QWTLI-EPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWS 566 (712)
Q Consensus 517 ~W~~~-~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 566 (712)
.-..+ ..+..| .+++..++.||+.... ...|.++|+.+.+-.
T Consensus 200 ~~~~~~~~~~~P---~gi~~d~~~lyva~~~-----~~~v~~~d~~~g~~~ 242 (267)
T 1npe_A 200 GRRKVLEGLQYP---FAVTSYGKNLYYTDWK-----TNSVIAMDLAISKEM 242 (267)
T ss_dssp EEEEEEECCCSE---EEEEEETTEEEEEETT-----TTEEEEEETTTTEEE
T ss_pred ceEEEecCCCCc---eEEEEeCCEEEEEECC-----CCeEEEEeCCCCCce
Confidence 43222 222222 3555668999997543 367999999877544
|
| >3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.95 E-value=2.4 Score=39.16 Aligned_cols=144 Identities=14% Similarity=0.070 Sum_probs=78.8
Q ss_pred EEEEECCEEEEEeecCCCCccceEEEEECCC---CcEEEe----CCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEE
Q psy14726 391 GTAVIGYNIYVIGGFDGNEYYNSCRCFNAVT---KVWKEI----APMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEK 463 (712)
Q Consensus 391 ~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~---~~W~~~----~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~ 463 (712)
+++.+++.+|+|-| +.+|+++... +-=..+ +.+|. .-..+....++++|+|-| +.+|+
T Consensus 10 A~~~~~g~~~fFkg-------~~~w~~~~~~~~~gyP~~I~~~w~glP~-~iDAa~~~~~g~~yfFkg-------~~yw~ 74 (196)
T 3c7x_A 10 TVAMLRGEMFVFKE-------RWFWRVRNNQVMDGYPMPIGQFWRGLPA-SINTAYERKDGKFVFFKG-------DKHWV 74 (196)
T ss_dssp EEEEETTEEEEEET-------TEEEEEETTEECTTCSEEHHHHSTTCCS-SCCEEEECTTSCEEEEET-------TEEEE
T ss_pred EEEEcCCEEEEEEC-------CEEEEEECCccCCCCceEhhHhccCCCC-CccEEEEeCCCcEEEecC-------CEEEE
Confidence 34456899999987 4577775431 100111 23343 222222224789999977 57888
Q ss_pred eecCCCce---EEccc----CCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeE-----EeCCC-CCCC
Q psy14726 464 YNYTENQW---SLIAP----MNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWT-----LIEPM-RHRR 528 (712)
Q Consensus 464 yd~~~~~W---~~~~~----~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~-----~~~~~-p~~r 528 (712)
|+..+... ..+.. +|..+.. +|... ++++|.+-| +..++||..+++-. .+... ..+.
T Consensus 75 ~~~~~~~~gyPk~I~~~~~glP~~~ID-AA~~~~~~g~~yfFkG-------~~yw~yd~~~~~v~~gyPk~i~~~~gip~ 146 (196)
T 3c7x_A 75 FDEASLEPGYPKHIKELGRGLPTDKID-AALFWMPNGKTYFFRG-------NKYYRFNEELRAVDSEYPKNIKVWEGIPE 146 (196)
T ss_dssp EETTEECTTCSEEGGGTCBSCCSSCCS-EEEEETTTTEEEEEET-------TEEEEEETTTTEECTTCSEEGGGSBTCCS
T ss_pred EeCCcccCCCCeEhhhcCCCCCCCccc-EEEEEccCCEEEEEEC-------CEEEEEeCCcccccCCCCccHHHCCCcCC
Confidence 87543211 12222 3322222 22222 689999977 46889998775421 11111 1122
Q ss_pred cceEEEEE-CC-EEEEEcCCCCCCccceEEEEeCCCCc
Q psy14726 529 SGVSCIAY-HE-CIYVIGGFNGMSRMCNGEKYNPVTKT 564 (712)
Q Consensus 529 ~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~~~ 564 (712)
.--++... ++ ++|++-| +..++||..+.+
T Consensus 147 ~idaAf~~~~~~~~YfFkg-------~~y~r~d~~~~~ 177 (196)
T 3c7x_A 147 SPRGSFMGSDEVFTYFYKG-------NKYWKFNNQKLK 177 (196)
T ss_dssp SCSEEEECTTSSEEEEEET-------TEEEEEETTTTE
T ss_pred CcceeEEecCCCEEEEEEC-------CEEEEEECCcce
Confidence 22334434 44 8999977 578999987764
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=90.94 E-value=15 Score=37.29 Aligned_cols=153 Identities=7% Similarity=-0.034 Sum_probs=80.6
Q ss_pred ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeE
Q psy14726 442 HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWT 519 (712)
Q Consensus 442 ~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 519 (712)
.+|++.++++.. ....+.+||+.+.+....... ... -..+.+ ++++++.|+. +.+.+++..++...
T Consensus 143 pDg~~la~as~~---~d~~i~iwd~~~~~~~~~~~~--~~~-V~~v~fspdg~~l~s~s~------~~~~~~~~~~~~~~ 210 (365)
T 4h5i_A 143 REGTVAAIASSK---VPAIMRIIDPSDLTEKFEIET--RGE-VKDLHFSTDGKVVAYITG------SSLEVISTVTGSCI 210 (365)
T ss_dssp TTSSCEEEEESC---SSCEEEEEETTTTEEEEEEEC--SSC-CCEEEECTTSSEEEEECS------SCEEEEETTTCCEE
T ss_pred CCCCEEEEEECC---CCCEEEEeECCCCcEEEEeCC--CCc-eEEEEEccCCceEEeccc------eeEEEEEeccCcce
Confidence 356655443211 125688999988765433221 111 122233 6777776652 34667777776654
Q ss_pred EeCCCCCCCcceE--EEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcC--CCCCCccceEEEEE--CCEEEEEccc
Q psy14726 520 LIEPMRHRRSGVS--CIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVP--DMYNPRSNFAIEVI--DDMIFAIGGF 593 (712)
Q Consensus 520 ~~~~~p~~r~~~~--~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~i~v~GG~ 593 (712)
............. +..-++..++.++.++.. ...++.+|.....+.... .+........++.+ ++++++.|+.
T Consensus 211 ~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~ 289 (365)
T 4h5i_A 211 ARKTDFDKNWSLSKINFIADDTVLIAASLKKGK-GIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASN 289 (365)
T ss_dssp EEECCCCTTEEEEEEEEEETTEEEEEEEESSSC-CEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEET
T ss_pred eeeecCCCCCCEEEEEEcCCCCEEEEEecCCcc-eeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcC
Confidence 3332222222222 233478888877654322 235667776666554331 11111112223333 7888899987
Q ss_pred CCCceeeeEEEEECCCCeE
Q psy14726 594 NGVTTIYHVECYDEKTDEW 612 (712)
Q Consensus 594 ~~~~~~~~v~~yd~~~~~W 612 (712)
++ .|.+||..+.+-
T Consensus 290 D~-----~V~iwd~~~~~~ 303 (365)
T 4h5i_A 290 DN-----SIALVKLKDLSM 303 (365)
T ss_dssp TS-----CEEEEETTTTEE
T ss_pred CC-----EEEEEECCCCcE
Confidence 65 578899887653
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=90.86 E-value=4.9 Score=40.01 Aligned_cols=143 Identities=9% Similarity=0.099 Sum_probs=75.1
Q ss_pred CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEE
Q psy14726 443 HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTL 520 (712)
Q Consensus 443 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 520 (712)
++..++.|+.+ ..+.+||..+++-.. .+........++.+ ++.+++.|+.++ .+..||.....-..
T Consensus 76 dg~~l~s~s~D-----~~v~~wd~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~s~D~-----~i~vwd~~~~~~~~ 143 (319)
T 3frx_A 76 DGAYALSASWD-----KTLRLWDVATGETYQ--RFVGHKSDVMSVDIDKKASMIISGSRDK-----TIKVWTIKGQCLAT 143 (319)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTTEEEE--EEECCSSCEEEEEECTTSCEEEEEETTS-----CEEEEETTSCEEEE
T ss_pred CCCEEEEEeCC-----CEEEEEECCCCCeeE--EEccCCCcEEEEEEcCCCCEEEEEeCCC-----eEEEEECCCCeEEE
Confidence 56777777754 568899988875321 11111111122223 567778887664 47777876554333
Q ss_pred eCCCCCCCcceEEEEE-------CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE--CCEEEEEc
Q psy14726 521 IEPMRHRRSGVSCIAY-------HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAIG 591 (712)
Q Consensus 521 ~~~~p~~r~~~~~~~~-------~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~G 591 (712)
+..... .-..+... ++..++.||.+ ..+..||..+.+-... +.........+.+ ++++++.|
T Consensus 144 ~~~h~~--~v~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~sp~g~~l~s~ 214 (319)
T 3frx_A 144 LLGHND--WVSQVRVVPNEKADDDSVTIISAGND-----KMVKAWNLNQFQIEAD--FIGHNSNINTLTASPDGTLIASA 214 (319)
T ss_dssp ECCCSS--CEEEEEECCC------CCEEEEEETT-----SCEEEEETTTTEEEEE--ECCCCSCEEEEEECTTSSEEEEE
T ss_pred EeccCC--cEEEEEEccCCCCCCCccEEEEEeCC-----CEEEEEECCcchhhee--ecCCCCcEEEEEEcCCCCEEEEE
Confidence 321111 11111111 23356666654 4678888876543321 1111111222223 67788888
Q ss_pred ccCCCceeeeEEEEECCCCe
Q psy14726 592 GFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 592 G~~~~~~~~~v~~yd~~~~~ 611 (712)
|.++ .+.+||..+.+
T Consensus 215 ~~dg-----~i~iwd~~~~~ 229 (319)
T 3frx_A 215 GKDG-----EIMLWNLAAKK 229 (319)
T ss_dssp ETTC-----EEEEEETTTTE
T ss_pred eCCC-----eEEEEECCCCc
Confidence 8765 67888887764
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=90.73 E-value=16 Score=37.15 Aligned_cols=189 Identities=8% Similarity=-0.065 Sum_probs=98.2
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 474 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 474 (712)
++++.++++.. ....+..+|+.+.+......-. ..-.+++. -+|++++.|+. +.+.+++..+......
T Consensus 144 Dg~~la~as~~---~d~~i~iwd~~~~~~~~~~~~~--~~V~~v~fspdg~~l~s~s~------~~~~~~~~~~~~~~~~ 212 (365)
T 4h5i_A 144 EGTVAAIASSK---VPAIMRIIDPSDLTEKFEIETR--GEVKDLHFSTDGKVVAYITG------SSLEVISTVTGSCIAR 212 (365)
T ss_dssp TSSCEEEEESC---SSCEEEEEETTTTEEEEEEECS--SCCCEEEECTTSSEEEEECS------SCEEEEETTTCCEEEE
T ss_pred CCCEEEEEECC---CCCEEEEeECCCCcEEEEeCCC--CceEEEEEccCCceEEeccc------eeEEEEEeccCcceee
Confidence 55555443311 1246888999988764432211 11123333 35677666652 3467777777665433
Q ss_pred ccCCccccceeE--EEECCEEEEEcccCCCCccCceEEeeCCCCeeEEeC--CCCCCCcceEEEEE--CCEEEEEcCCCC
Q psy14726 475 APMNVERSDASA--TTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIE--PMRHRRSGVSCIAY--HECIYVIGGFNG 548 (712)
Q Consensus 475 ~~~p~~r~~~~~--~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~ 548 (712)
............ ..-+++.++.++.++.. ...+..+|.....+.... .+........++.+ ++++++.|+.+
T Consensus 213 ~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D- 290 (365)
T 4h5i_A 213 KTDFDKNWSLSKINFIADDTVLIAASLKKGK-GIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASND- 290 (365)
T ss_dssp ECCCCTTEEEEEEEEEETTEEEEEEEESSSC-CEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETT-
T ss_pred eecCCCCCCEEEEEEcCCCCEEEEEecCCcc-eeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCC-
Confidence 222111111222 23378888888765421 234666676666554332 11111112222223 67888888865
Q ss_pred CCccceEEEEeCCCCcEEEcCCCCCC-ccceEEEEE--CCEEEEEcccCCCceeeeEEEEECC
Q psy14726 549 MSRMCNGEKYNPVTKTWSQVPDMYNP-RSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEK 608 (712)
Q Consensus 549 ~~~~~~v~~yd~~~~~W~~~~~~p~~-r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~ 608 (712)
..|..||..+.+-.. ..... ...-..+.+ ++++++.|+.++ .|-+||+.
T Consensus 291 ----~~V~iwd~~~~~~~~--~~~~gH~~~V~~v~fSpdg~~laS~S~D~-----tvrvw~ip 342 (365)
T 4h5i_A 291 ----NSIALVKLKDLSMSK--IFKQAHSFAITEVTISPDSTYVASVSAAN-----TIHIIKLP 342 (365)
T ss_dssp ----SCEEEEETTTTEEEE--EETTSSSSCEEEEEECTTSCEEEEEETTS-----EEEEEECC
T ss_pred ----CEEEEEECCCCcEEE--EecCcccCCEEEEEECCCCCEEEEEeCCC-----eEEEEEcC
Confidence 468899988765322 11111 111223333 788888888765 57777764
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=89.94 E-value=20 Score=37.16 Aligned_cols=192 Identities=12% Similarity=0.114 Sum_probs=102.7
Q ss_pred CceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE--CCEEEEEeecCCCCccceEEEEECCCCc-
Q psy14726 347 HEILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKV- 423 (712)
Q Consensus 347 ~~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~- 423 (712)
.+.||+... ....|..+|+.++.-..+... . ...+ +++. ++.+|+...... ..++.+|+.++.
T Consensus 141 ~g~lyv~d~-----~~~~I~~id~~~g~~~~~~~~-~---~~~~-ia~~~~g~~l~~~d~~~~----~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 141 NNTVLAYQR-----DDPRVRLISVDDNKVTTVHPG-F---KGGK-PAVTKDKQRVYSIGWEGT----HTVYVYMKASGWA 206 (409)
T ss_dssp TTEEEEEET-----TTTEEEEEETTTTEEEEEEET-C---CBCB-CEECTTSSEEEEEBSSTT----CEEEEEEGGGTTC
T ss_pred CCCEEEEec-----CCCcEEEEECCCCEEEEeecc-C---CCCc-eeEecCCCcEEEEecCCC----ceEEEEEcCCCce
Confidence 345666543 224688899887766554222 1 1122 3333 456666643211 278999987654
Q ss_pred EEEeCCCC--CCcceeEEEEE--CCeEEEEcccCCCCCCceeEEeecCCCceEEccc---CCccccc-e-eEEEE--CCE
Q psy14726 424 WKEIAPMN--FKRCYVSTAVH--HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAP---MNVERSD-A-SATTL--QGK 492 (712)
Q Consensus 424 W~~~~~~~--~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~---~p~~r~~-~-~~~~~--~~~ 492 (712)
...+.... ....-+++++. ++.||+..+ ...+++||+.+.....+.. ....... . .++.- ++.
T Consensus 207 ~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~ 280 (409)
T 3hrp_A 207 PTRIGQLGSTFSGKIGAVALDETEEWLYFVDS------NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSN 280 (409)
T ss_dssp EEEEEECCTTSCSCCCBCEECTTSSEEEEECT------TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTE
T ss_pred eEEeeeccchhcCCcEEEEEeCCCCeEEEEEC------CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCE
Confidence 23331111 11222334443 689999432 2479999999887655521 1112222 1 44444 589
Q ss_pred EEEEcccCCCCccCceEEeeCCCCeeEEeCCC-CC---------C-Ccce-EEEEE-CCEEEEEcC-CCCCCccceEEEE
Q psy14726 493 IYITGGFNGHNCLNSCEVYDPECNQWTLIEPM-RH---------R-RSGV-SCIAY-HECIYVIGG-FNGMSRMCNGEKY 558 (712)
Q Consensus 493 iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-p~---------~-r~~~-~~~~~-~~~iyv~GG-~~~~~~~~~v~~y 558 (712)
||+.... .+.+.+||+....-...... .. . .... +++.. ++.||+.-. . ...|.++
T Consensus 281 lyv~d~~-----~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~-----~~~I~~~ 350 (409)
T 3hrp_A 281 FYMSDQN-----LSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFK-----GYCLRKL 350 (409)
T ss_dssp EEEEETT-----TTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTT-----TCEEEEE
T ss_pred EEEEeCC-----CCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCC-----CCEEEEE
Confidence 9998542 35799998876533322221 00 0 1112 23332 567999854 3 3678999
Q ss_pred eCCCCcEEEc
Q psy14726 559 NPVTKTWSQV 568 (712)
Q Consensus 559 d~~~~~W~~~ 568 (712)
|+.+.....+
T Consensus 351 ~~~~G~v~~~ 360 (409)
T 3hrp_A 351 DILDGYVSTV 360 (409)
T ss_dssp ETTTTEEEEE
T ss_pred ECCCCEEEEE
Confidence 9766766555
|
| >1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A* | Back alignment and structure |
|---|
Probab=89.83 E-value=3.8 Score=43.30 Aligned_cols=146 Identities=14% Similarity=0.059 Sum_probs=80.7
Q ss_pred EEEEECCEEEEEeecCCCCccceEEEEECCCCcEEE--e----CCCCCCcceeEEEE--ECCeEEEEcccCCCCCCceeE
Q psy14726 391 GTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE--I----APMNFKRCYVSTAV--HHDVIYAMGGYNGQRRQNSVE 462 (712)
Q Consensus 391 ~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~--~----~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~ 462 (712)
+++.+++.+|+|-| +.+|+++.....+.. + +.+|.. .. ++.. .++++|+|=| +.+|
T Consensus 267 Ai~~~~ge~y~Fkg-------~~~wr~~~~~~~~~p~~I~~~Wp~LP~~-iD-Aa~~~~~~g~~~fFKg-------~~~W 330 (450)
T 1su3_A 267 AITTIRGEVMFFKD-------RFYMRTNPFYPEVELNFISVFWPQLPNG-LE-AAYEFADRDEVRFFKG-------NKYW 330 (450)
T ss_dssp EEEEETTEEEEEET-------TEEEECCTTSSSCEEEEGGGTCTTSCSS-CC-EEEEEGGGTEEEEEET-------TEEE
T ss_pred eEEecCCeEEEEeC-------CEEEEEcCCCCcccceehhHhccCCCCC-ee-EEEEEcCCCeEEEEeC-------CEEE
Confidence 45567999999987 346666654433321 1 123321 11 2222 3689999977 5678
Q ss_pred EeecCCCc--e-EEcc---cCCccccce-eEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeE-----EeC-CCC-C
Q psy14726 463 KYNYTENQ--W-SLIA---PMNVERSDA-SATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWT-----LIE-PMR-H 526 (712)
Q Consensus 463 ~yd~~~~~--W-~~~~---~~p~~r~~~-~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~-----~~~-~~p-~ 526 (712)
+|+..+-. + ..+. .+|..-..- +|... ++++|+|-| +..|+||..+++-. .+. ..| .
T Consensus 331 ~~~~~~~~~gyP~~i~~~~g~P~~~~~IDAA~~~~~~~k~yfFkG-------~~yw~yd~~~~~~~~gYPk~I~~~fpgi 403 (450)
T 1su3_A 331 AVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVA-------NKYWRYDEYKRSMDPGYPKMIAHDFPGI 403 (450)
T ss_dssp EEETTEECTTCSEEHHHHHCCCTTCCCCCEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCSEEHHHHSTTS
T ss_pred EecCCcccCCCceeeehhhcCCCCCCccceEEEEcCCCeEEEEeC-------CEEEEEeCCCccccCCCCcchhhcCCCC
Confidence 88743210 1 1111 122211122 22233 689999987 56899987654321 111 011 1
Q ss_pred CCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEE
Q psy14726 527 RRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWS 566 (712)
Q Consensus 527 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 566 (712)
+..--+++..++++|+|-| +..|+||..+.+=.
T Consensus 404 p~~iDAA~~~~g~~YFFkg-------~~ywr~d~~~~~v~ 436 (450)
T 1su3_A 404 GHKVDAVFMKDGFFYFFHG-------TRQYKFDPKTKRIL 436 (450)
T ss_dssp CSCCSEEEEETTEEEEEET-------TEEEEEETTTTEEE
T ss_pred CCCccEEEEcCCeEEEEeC-------CEEEEEECCcceEe
Confidence 2223345557899999987 57899998776544
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=89.73 E-value=6.8 Score=42.85 Aligned_cols=190 Identities=9% Similarity=0.031 Sum_probs=98.4
Q ss_pred CEEEEEeecCCCCccceEEEEEC--CCCcEEEeCCCCCCcceeEEEEECC-eEEEEcccCCCCCCceeEEeecCCCceEE
Q psy14726 397 YNIYVIGGFDGNEYYNSCRCFNA--VTKVWKEIAPMNFKRCYVSTAVHHD-VIYAMGGYNGQRRQNSVEKYNYTENQWSL 473 (712)
Q Consensus 397 ~~lyv~GG~~~~~~~~~v~~yd~--~~~~W~~~~~~~~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 473 (712)
+++.+.+...++.....+|..+. .... ..+...+..+ ......++ .++++.+.. ..+..||..+.+...
T Consensus 75 d~~l~~~~~~~g~~~~~l~~~~~~~~g~~-~~l~~~~~~~--~~~~s~dg~~~~~~s~~~-----~~~~l~d~~~g~~~~ 146 (582)
T 3o4h_A 75 GRVILVRDVSKGAEQHALFKVNTSRPGEE-QRLEAVKPMR--ILSGVDTGEAVVFTGATE-----DRVALYALDGGGLRE 146 (582)
T ss_dssp SEEEEEEECSTTSCCEEEEEEETTSTTCC-EECTTSCSBE--EEEEEECSSCEEEEEECS-----SCEEEEEEETTEEEE
T ss_pred CeEEEEeccCCCCcceEEEEEeccCCCcc-ccccCCCCce--eeeeCCCCCeEEEEecCC-----CCceEEEccCCcEEE
Confidence 35555544322233446788887 4333 2444333322 33344444 455554432 234478988887776
Q ss_pred cccCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccc
Q psy14726 474 IAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMC 553 (712)
Q Consensus 474 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~ 553 (712)
+...+. ...+..-+|+..++++.+... ..+++.+|..+++++.+..-+.. ....+..-+|+.++.+..++ ..
T Consensus 147 l~~~~~---~~~~~spDG~~la~~~~~~~~-~~~i~~~d~~~g~~~~l~~~~~~-~~~~~~SpDG~~l~~~~~~~---~~ 218 (582)
T 3o4h_A 147 LARLPG---FGFVSDIRGDLIAGLGFFGGG-RVSLFTSNLSSGGLRVFDSGEGS-FSSASISPGMKVTAGLETAR---EA 218 (582)
T ss_dssp EEEESS---CEEEEEEETTEEEEEEEEETT-EEEEEEEETTTCCCEEECCSSCE-EEEEEECTTSCEEEEEECSS---CE
T ss_pred eecCCC---ceEEECCCCCEEEEEEEcCCC-CeEEEEEcCCCCCceEeecCCCc-cccceECCCCCEEEEccCCC---ee
Confidence 654333 223333467666655543221 24599999999998877533221 11122222555444433221 35
Q ss_pred eEEEEeCCCCcEEEcCCCCCCccceE-----E--EEECCEEEEEcccCCCceeeeEEEEEC
Q psy14726 554 NGEKYNPVTKTWSQVPDMYNPRSNFA-----I--EVIDDMIFAIGGFNGVTTIYHVECYDE 607 (712)
Q Consensus 554 ~v~~yd~~~~~W~~~~~~p~~r~~~~-----~--~~~~~~i~v~GG~~~~~~~~~v~~yd~ 607 (712)
.++.+|..+++...+......-.... . ..-++++++.+..++ .+.+|+.
T Consensus 219 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g-----~~~l~~~ 274 (582)
T 3o4h_A 219 RLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREG-----RSAVFID 274 (582)
T ss_dssp EEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETT-----EEEEEET
T ss_pred EEEEEcCCCCcEEEccCCCcChhhhhhccccceeEcCCCcEEEEEEcCC-----cEEEEEE
Confidence 79999999988874332211111110 0 122667777776554 4566776
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=89.55 E-value=20 Score=37.00 Aligned_cols=148 Identities=7% Similarity=-0.030 Sum_probs=78.9
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCC-CCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEE
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMN-FKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSL 473 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~-~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 473 (712)
++.+++.|+.+ ..+..||..+.+-...-..+ ....-.+++. -++..++.|+.+ ..+..||..+.+...
T Consensus 181 ~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~~~~~~ 250 (437)
T 3gre_A 181 EKSLLVALTNL-----SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR-----GIIDIWDIRFNVLIR 250 (437)
T ss_dssp SCEEEEEEETT-----SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT-----SCEEEEETTTTEEEE
T ss_pred CCCEEEEEeCC-----CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC-----CeEEEEEcCCccEEE
Confidence 46777787754 46899999887643221111 1112222222 256777877754 458899988765432
Q ss_pred cccCCccccceeEEEE------CCEEEEEcccCCCCccCceEEeeCCCCeeEEe-C-C---C------C-----------
Q psy14726 474 IAPMNVERSDASATTL------QGKIYITGGFNGHNCLNSCEVYDPECNQWTLI-E-P---M------R----------- 525 (712)
Q Consensus 474 ~~~~p~~r~~~~~~~~------~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~-~---~------p----------- 525 (712)
.-..+.. .....+.+ ++.+++.|+.+ ..+..||..+.+-... . . . |
T Consensus 251 ~~~~~~~-~~v~~~~~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 324 (437)
T 3gre_A 251 SWSFGDH-APITHVEVCQFYGKNSVIVVGGSSK-----TFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFC 324 (437)
T ss_dssp EEBCTTC-EEEEEEEECTTTCTTEEEEEEESTT-----EEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCC
T ss_pred EEecCCC-CceEEEEeccccCCCccEEEEEcCC-----CcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceec
Confidence 2111111 11111111 35566666655 3588888877653221 1 0 0 0
Q ss_pred ---CCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCc
Q psy14726 526 ---HRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKT 564 (712)
Q Consensus 526 ---~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 564 (712)
....-.+++..++.+++.||.+ ..+..||..+.+
T Consensus 325 ~~~~~~~v~~l~~~~~~~l~s~~~d-----~~i~~wd~~~~~ 361 (437)
T 3gre_A 325 GIRSLNALSTISVSNDKILLTDEAT-----SSIVMFSLNELS 361 (437)
T ss_dssp CCCSGGGGCCEEEETTEEEEEEGGG-----TEEEEEETTCGG
T ss_pred ccccCCceEEEEECCceEEEecCCC-----CeEEEEECCCcc
Confidence 0011223344478888888864 467888887654
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=89.55 E-value=21 Score=36.73 Aligned_cols=214 Identities=13% Similarity=0.008 Sum_probs=118.9
Q ss_pred eEEEEECCCCcEEEcccCCCCCCCcceEEEEE--CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE
Q psy14726 364 FVETYDTRADRWVKIEQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV 441 (712)
Q Consensus 364 ~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~ 441 (712)
.|..+++.......+.. ......++++. ++.||+.--. ...++++++.......+....... -.++++
T Consensus 97 ~I~~i~~~~~~~~~~~~----~~~~~~gl~~d~~~~~ly~~D~~-----~~~I~r~~~~g~~~~~~~~~~~~~-p~glav 166 (386)
T 3v65_B 97 DIRQVLPHRSEYTLLLN----NLENAIALDFHHRRELVFWSDVT-----LDRILRANLNGSNVEEVVSTGLES-PGGLAV 166 (386)
T ss_dssp CEEEECTTSCCCEEEEC----SCSCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCCEEEEECSSCSC-CCCEEE
T ss_pred cceeeccCCCcEEEEec----CCCccEEEEEecCCCeEEEEeCC-----CCcEEEEecCCCCcEEEEeCCCCC-ccEEEE
Confidence 56777777666554321 12234555555 6789987432 357999999887766553222111 123333
Q ss_pred --ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeE-EEE--CCEEEEEcccCCCCccCceEEeeCCCC
Q psy14726 442 --HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASA-TTL--QGKIYITGGFNGHNCLNSCEVYDPECN 516 (712)
Q Consensus 442 --~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~-~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~ 516 (712)
.++.||+.-.. .+.++++++....-..+..- ....... ++- ++.||+.--.. ...++++++...
T Consensus 167 d~~~g~lY~~d~~-----~~~I~~~~~dg~~~~~l~~~--~l~~P~giavdp~~g~ly~td~~~----~~~I~r~~~dG~ 235 (386)
T 3v65_B 167 DWVHDKLYWTDSG-----TSRIEVANLDGAHRKVLLWQ--SLEKPRAIALHPMEGTIYWTDWGN----TPRIEASSMDGS 235 (386)
T ss_dssp ETTTTEEEEEETT-----TTEEEECBTTSCSCEEEECS--SCSCEEEEEEETTTTEEEEEECSS----SCEEEEEETTSC
T ss_pred EeCCCeEEEEcCC-----CCeEEEEeCCCCceEEeecC--CCCCCcEEEEEcCCCeEEEeccCC----CCEEEEEeCCCC
Confidence 47899997432 25788888876543333221 1112223 332 68899874211 357999998765
Q ss_pred eeEEeCCCCCCCcceEEEE--ECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEECCEEEEEcccC
Q psy14726 517 QWTLIEPMRHRRSGVSCIA--YHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFN 594 (712)
Q Consensus 517 ~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~ 594 (712)
.-+.+..-.. ..-.++++ .+++||+.-.. ...|+++|+....-..+.... ...-.++++.++.||+.--.+
T Consensus 236 ~~~~~~~~~~-~~PnGlavd~~~~~lY~aD~~-----~~~I~~~d~dG~~~~~~~~~~-~~~P~giav~~~~ly~td~~~ 308 (386)
T 3v65_B 236 GRRIIADTHL-FWPNGLTIDYAGRRMYWVDAK-----HHVIERANLDGSHRKAVISQG-LPHPFAITVFEDSLYWTDWHT 308 (386)
T ss_dssp SCEEEECSSC-SCEEEEEEEGGGTEEEEEETT-----TTEEEEECTTSCSCEEEECSS-CSSEEEEEEETTEEEEEETTT
T ss_pred CcEEEEECCC-CCeeeEEEeCCCCEEEEEECC-----CCEEEEEeCCCCeeEEEEECC-CCCceEEEEECCEEEEeeCCC
Confidence 4333321111 11123333 36899998532 368999998643322221111 122356677899999985322
Q ss_pred CCceeeeEEEEECCCC
Q psy14726 595 GVTTIYHVECYDEKTD 610 (712)
Q Consensus 595 ~~~~~~~v~~yd~~~~ 610 (712)
..|..+|..++
T Consensus 309 -----~~V~~~~~~~G 319 (386)
T 3v65_B 309 -----KSINSANKFTG 319 (386)
T ss_dssp -----TEEEEEETTTC
T ss_pred -----CeEEEEECCCC
Confidence 36888885554
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=89.54 E-value=27 Score=38.30 Aligned_cols=188 Identities=14% Similarity=0.118 Sum_probs=99.9
Q ss_pred EEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcce-eEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcc-
Q psy14726 399 IYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCY-VSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA- 475 (712)
Q Consensus 399 lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~- 475 (712)
.++.||.+ ..+..||..+.+... .+...... .+++. -++++++.||.+ ..+..||..+.+....-
T Consensus 162 ~l~s~s~D-----~~v~lwd~~~~~~~~--~l~~H~~~V~~v~fspdg~~las~s~D-----~~i~lwd~~~g~~~~~~~ 229 (611)
T 1nr0_A 162 RIISGSDD-----NTVAIFEGPPFKFKS--TFGEHTKFVHSVRYNPDGSLFASTGGD-----GTIVLYNGVDGTKTGVFE 229 (611)
T ss_dssp EEEEEETT-----SCEEEEETTTBEEEE--EECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCCEEEECB
T ss_pred EEEEEeCC-----CeEEEEECCCCeEee--eeccccCceEEEEECCCCCEEEEEECC-----CcEEEEECCCCcEeeeec
Confidence 56666654 347788876654432 12211111 22322 367888888754 45888888776643221
Q ss_pred cCCccccce----eEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCC-cceEEEEECCEEEEEcCCCC
Q psy14726 476 PMNVERSDA----SATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRR-SGVSCIAYHECIYVIGGFNG 548 (712)
Q Consensus 476 ~~p~~r~~~----~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r-~~~~~~~~~~~iyv~GG~~~ 548 (712)
.......+| ..+.+ +++.++.||.+ .++..+|..+.+....-...... .....+..++..++.++.+
T Consensus 230 ~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D-----~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d- 303 (611)
T 1nr0_A 230 DDSLKNVAHSGSVFGLTWSPDGTKIASASAD-----KTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISAN- 303 (611)
T ss_dssp CTTSSSCSSSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETT-
T ss_pred cccccccccCCCEEEEEECCCCCEEEEEeCC-----CeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCC-
Confidence 100000112 12223 67777888766 46888999888765432222111 1122333466666666654
Q ss_pred CCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCeEEEc
Q psy14726 549 MSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 549 ~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
..+..||+.+.+-.... .........+.+ +++.++.|+.++ .+.+||..++.....
T Consensus 304 ----~~i~~~~~~~~~~~~~~--~gh~~~v~~l~~spdg~~l~s~s~D~-----~v~~Wd~~~~~~~~~ 361 (611)
T 1nr0_A 304 ----GFINFVNPELGSIDQVR--YGHNKAITALSSSADGKTLFSADAEG-----HINSWDISTGISNRV 361 (611)
T ss_dssp ----CCEEEEETTTTEEEEEE--CCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCCEEEC
T ss_pred ----CcEEEEeCCCCCcceEE--cCCCCCEEEEEEeCCCCEEEEEeCCC-----cEEEEECCCCceeee
Confidence 45678888766532221 111111222223 677788888765 578889888765443
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=89.49 E-value=11 Score=39.21 Aligned_cols=149 Identities=11% Similarity=0.019 Sum_probs=82.1
Q ss_pred CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEE
Q psy14726 443 HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTL 520 (712)
Q Consensus 443 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 520 (712)
++.+++.|+.+ ..+..||..+.+-...-..+.......++.+ +++.++.|+.++ .+..||..+.+...
T Consensus 181 ~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg-----~i~iwd~~~~~~~~ 250 (437)
T 3gre_A 181 EKSLLVALTNL-----SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRG-----IIDIWDIRFNVLIR 250 (437)
T ss_dssp SCEEEEEEETT-----SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTS-----CEEEEETTTTEEEE
T ss_pred CCCEEEEEeCC-----CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCC-----eEEEEEcCCccEEE
Confidence 46777777754 4689999988664322111111122233333 677888887664 58899988866533
Q ss_pred eCCCCCCCcceEEEEE-----CCEEEEEcCCCCCCccceEEEEeCCCCcEEEc-C-C---C------C------------
Q psy14726 521 IEPMRHRRSGVSCIAY-----HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQV-P-D---M------Y------------ 572 (712)
Q Consensus 521 ~~~~p~~r~~~~~~~~-----~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~-~---~------p------------ 572 (712)
.-..+....-.+++.. ++.+++.|+.+ ..+..||..+.+-... . . . |
T Consensus 251 ~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 325 (437)
T 3gre_A 251 SWSFGDHAPITHVEVCQFYGKNSVIVVGGSSK-----TFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCG 325 (437)
T ss_dssp EEBCTTCEEEEEEEECTTTCTTEEEEEEESTT-----EEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCC
T ss_pred EEecCCCCceEEEEeccccCCCccEEEEEcCC-----CcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecc
Confidence 2222221111112111 34566666643 4688888876652221 0 0 0 0
Q ss_pred --CCccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 573 --NPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 573 --~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
....-.+++..++.+++.||.++ .+.+||..+.+
T Consensus 326 ~~~~~~v~~l~~~~~~~l~s~~~d~-----~i~~wd~~~~~ 361 (437)
T 3gre_A 326 IRSLNALSTISVSNDKILLTDEATS-----SIVMFSLNELS 361 (437)
T ss_dssp CCSGGGGCCEEEETTEEEEEEGGGT-----EEEEEETTCGG
T ss_pred cccCCceEEEEECCceEEEecCCCC-----eEEEEECCCcc
Confidence 00112234444888899998766 68889988765
|
| >1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A* | Back alignment and structure |
|---|
Probab=89.47 E-value=4.5 Score=42.74 Aligned_cols=144 Identities=11% Similarity=0.078 Sum_probs=80.5
Q ss_pred EEEEECCeEEEEcccCCCCCCceeEEeecCCCceEE--c----ccCCccccceeEEEE--CCEEEEEcccCCCCccCceE
Q psy14726 438 STAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSL--I----APMNVERSDASATTL--QGKIYITGGFNGHNCLNSCE 509 (712)
Q Consensus 438 ~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~--~----~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~ 509 (712)
+++..+|.+|+|-| ..+|+++.....+.. + +.+|.. .. ++... ++++|+|=| +.+|
T Consensus 267 Ai~~~~ge~y~Fkg-------~~~wr~~~~~~~~~p~~I~~~Wp~LP~~-iD-Aa~~~~~~g~~~fFKg-------~~~W 330 (450)
T 1su3_A 267 AITTIRGEVMFFKD-------RFYMRTNPFYPEVELNFISVFWPQLPNG-LE-AAYEFADRDEVRFFKG-------NKYW 330 (450)
T ss_dssp EEEEETTEEEEEET-------TEEEECCTTSSSCEEEEGGGTCTTSCSS-CC-EEEEEGGGTEEEEEET-------TEEE
T ss_pred eEEecCCeEEEEeC-------CEEEEEcCCCCcccceehhHhccCCCCC-ee-EEEEEcCCCeEEEEeC-------CEEE
Confidence 55678999999977 456777655443321 1 123321 11 22222 689999977 4577
Q ss_pred EeeCCCCe--e-EEeC---CCCC--CCcceEEEEE-CCEEEEEcCCCCCCccceEEEEeCCCCcEEE-----c----CCC
Q psy14726 510 VYDPECNQ--W-TLIE---PMRH--RRSGVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQ-----V----PDM 571 (712)
Q Consensus 510 ~yd~~~~~--W-~~~~---~~p~--~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-----~----~~~ 571 (712)
+|+..+-. + ..+. .+|. ..-.++.... ++++|+|-| +..|+||..+.+-.. + +.+
T Consensus 331 ~~~~~~~~~gyP~~i~~~~g~P~~~~~IDAA~~~~~~~k~yfFkG-------~~yw~yd~~~~~~~~gYPk~I~~~fpgi 403 (450)
T 1su3_A 331 AVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVA-------NKYWRYDEYKRSMDPGYPKMIAHDFPGI 403 (450)
T ss_dssp EEETTEECTTCSEEHHHHHCCCTTCCCCCEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCSEEHHHHSTTS
T ss_pred EecCCcccCCCceeeehhhcCCCCCCccceEEEEcCCCeEEEEeC-------CEEEEEeCCCccccCCCCcchhhcCCCC
Confidence 77643210 0 1111 1232 1222222222 589999987 678999987543221 1 122
Q ss_pred CCCccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeEE
Q psy14726 572 YNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWY 613 (712)
Q Consensus 572 p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 613 (712)
| ..--++...++++|+|-|. ..|.||..+.+=.
T Consensus 404 p--~~iDAA~~~~g~~YFFkg~-------~ywr~d~~~~~v~ 436 (450)
T 1su3_A 404 G--HKVDAVFMKDGFFYFFHGT-------RQYKFDPKTKRIL 436 (450)
T ss_dssp C--SCCSEEEEETTEEEEEETT-------EEEEEETTTTEEE
T ss_pred C--CCccEEEEcCCeEEEEeCC-------EEEEEECCcceEe
Confidence 2 2223445579999999663 6799998876644
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=89.46 E-value=18 Score=35.92 Aligned_cols=201 Identities=10% Similarity=0.042 Sum_probs=109.2
Q ss_pred ceEEEEECCCCcEEEeCCCCCCcceeEEEEE--CCeEEEEcccCCCCCCceeEEeecCC----CceEEcccCCcccccee
Q psy14726 412 NSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH--HDVIYAMGGYNGQRRQNSVEKYNYTE----NQWSLIAPMNVERSDAS 485 (712)
Q Consensus 412 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~----~~W~~~~~~p~~r~~~~ 485 (712)
+.+.++|+.+.....+.+ ....-++++.- +++||+.... ...++++|+.+ .....+-+.... .-.+
T Consensus 10 ~~I~~i~~~~~~~~~~~~--~~~~p~g~~~d~~~~~ly~~D~~-----~~~I~~~~~~g~~~~~~~~~~~~~~~~-~p~g 81 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLS-----QRMICSTQLDRAHGVSSYDTVISRDIQ-APDG 81 (316)
T ss_dssp SSEEEEETTSCCCEEEEC--SCSSEEEEEEETTTTEEEEEETT-----TTEEEEEEC--------CEEEECSSCS-CCCE
T ss_pred CeEEEEECCCcceEehhc--CCCceEEEEEEeCCCEEEEEECC-----CCcEEEEECCCCCCCcccEEEEeCCCC-CcCE
Confidence 458889998887665422 22334555554 5799997542 35799999876 222222111111 1133
Q ss_pred EEE--ECCEEEEEcccCCCCccCceEEeeCCCCeeEEeC--CCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEe
Q psy14726 486 ATT--LQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIE--PMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYN 559 (712)
Q Consensus 486 ~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd 559 (712)
+++ .++.||+.-.. .+.++++|+....-+.+. .+..| .++++. ++.||+.... ....|++++
T Consensus 82 lavd~~~~~ly~~d~~-----~~~I~~~~~~g~~~~~~~~~~~~~P---~~iavdp~~g~ly~~d~~----~~~~I~~~~ 149 (316)
T 1ijq_A 82 LAVDWIHSNIYWTDSV-----LGTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWG----TPAKIKKGG 149 (316)
T ss_dssp EEEETTTTEEEEEETT-----TTEEEEEETTSSSEEEEEECTTCCE---EEEEEETTTTEEEEEECS----SSCEEEEEE
T ss_pred EEEeecCCeEEEEECC-----CCEEEEEeCCCCceEEEEECCCCCc---ceEEeCCCCCEEEEEccC----CCCeEEEEc
Confidence 443 37899997532 356888998765433332 22222 233333 6889988531 135799999
Q ss_pred CCCCcEEEcCCCCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCeEEEccCC-CCcccceEEEEEcCccee
Q psy14726 560 PVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDM-NIYRSALSACVIMGLPNV 636 (712)
Q Consensus 560 ~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-p~~r~~~~~~~~~~~~~v 636 (712)
+....-+.+.... -..-.+++.- +++||+.-.. ...|+++|+....-..+... .......+.++.++.+|+
T Consensus 150 ~dG~~~~~~~~~~-~~~P~gla~d~~~~~lY~~D~~-----~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~ly~ 223 (316)
T 1ijq_A 150 LNGVDIYSLVTEN-IQWPNGITLDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFW 223 (316)
T ss_dssp TTSCCEEEEECSS-CSCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEE
T ss_pred CCCCCeEEEEECC-CCCceEEEEeccCCEEEEEECC-----CCeEEEEecCCCceEEEeecCCccCCcEEEEEECCEEEE
Confidence 8755444332211 1122344443 6899998432 24789999875433333221 112233456667788888
Q ss_pred Ee
Q psy14726 637 YD 638 (712)
Q Consensus 637 ~~ 638 (712)
..
T Consensus 224 ~d 225 (316)
T 1ijq_A 224 TD 225 (316)
T ss_dssp EE
T ss_pred EE
Confidence 74
|
| >1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A | Back alignment and structure |
|---|
Probab=89.23 E-value=14 Score=34.50 Aligned_cols=145 Identities=12% Similarity=0.085 Sum_probs=78.0
Q ss_pred EEEEECCEEEEEeecCCCCccceEEEEECCCCc-EE--Ee----CCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeE
Q psy14726 391 GTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKV-WK--EI----APMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVE 462 (712)
Q Consensus 391 ~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~-W~--~~----~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~ 462 (712)
+++.+++.+|+|=| +.+|+++..... .. .+ +.+|. .-..+... .++++|+|-| +.+|
T Consensus 35 Ai~~~~g~~~fFkg-------~~~Wr~~~~~~~~~~P~~I~~~wp~lp~-~IDAA~~~~~~~k~yfFkG-------~~yW 99 (218)
T 1gen_A 35 GIAQIRGEIFFFKD-------RFIWRTVTPRDKPMGPLLVATFWPELPE-KIDAVYEAPQEEKAVFFAG-------NEYW 99 (218)
T ss_dssp EEEEETTEEEEEET-------TEEEEESSTTSCCEEEEEGGGTCTTSCS-CCSEEEEETTTTEEEEEET-------TEEE
T ss_pred EEEeCCCcEEEEEC-------CEEEEEeCCCCccCCCEEHHHhcCCCCC-CccEEEEECCCCEEEEEeC-------CEEE
Confidence 44556899999977 346666654321 11 11 22332 22222222 2689999977 6789
Q ss_pred EeecCCCc--e-EEccc--CCccccc-eeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeE-----EeC-C-CCCC
Q psy14726 463 KYNYTENQ--W-SLIAP--MNVERSD-ASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWT-----LIE-P-MRHR 527 (712)
Q Consensus 463 ~yd~~~~~--W-~~~~~--~p~~r~~-~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~-----~~~-~-~p~~ 527 (712)
+||..+.. + ..+.. +|..... .+|... ++++|++-| +..++||..+++-. .+. . +..+
T Consensus 100 ~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG-------~~ywr~d~~~~~v~~gyPr~i~~~w~g~p 172 (218)
T 1gen_A 100 IYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG-------DKFWRYNEVKKKMDPGFPKLIADAWNAIP 172 (218)
T ss_dssp EEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCCEEHHHHSSSCC
T ss_pred EEcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEEC-------CEEEEEECccccccCCCCcchhhccCCCC
Confidence 99842110 0 11111 2211111 233332 689999987 56889998776422 111 0 1122
Q ss_pred CcceEEEEEC--CEEEEEcCCCCCCccceEEEEeCCCCc
Q psy14726 528 RSGVSCIAYH--ECIYVIGGFNGMSRMCNGEKYNPVTKT 564 (712)
Q Consensus 528 r~~~~~~~~~--~~iyv~GG~~~~~~~~~v~~yd~~~~~ 564 (712)
..-.++...+ +.+|++-| +..++||..+..
T Consensus 173 ~~idaAf~~~~~g~~YfFkg-------~~y~~~~~~~~~ 204 (218)
T 1gen_A 173 DNLDAVVDLQGGGHSYFFKG-------AYYLKLENQSLK 204 (218)
T ss_dssp SSCSEEEECTTTCEEEEEET-------TEEEEEETTEEE
T ss_pred CCCCEEEEEcCCCcEEEEEC-------CEEEEEECCcee
Confidence 2233455554 89999977 567888876543
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=89.18 E-value=22 Score=36.53 Aligned_cols=199 Identities=9% Similarity=0.012 Sum_probs=111.5
Q ss_pred ceEEEEECCCCcEEEeCCCCCCcceeEEEEE--CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEE-
Q psy14726 412 NSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH--HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATT- 488 (712)
Q Consensus 412 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~- 488 (712)
..+.++|+.......+... .....+++.- ++.||+.-- ....++++++.....+.+........ .+.++
T Consensus 96 ~~I~~i~~~~~~~~~~~~~--~~~~~gl~~d~~~~~ly~~D~-----~~~~I~r~~~~g~~~~~~~~~~~~~p-~glavd 167 (386)
T 3v65_B 96 IDIRQVLPHRSEYTLLLNN--LENAIALDFHHRRELVFWSDV-----TLDRILRANLNGSNVEEVVSTGLESP-GGLAVD 167 (386)
T ss_dssp SCEEEECTTSCCCEEEECS--CSCEEEEEEETTTTEEEEEET-----TTTEEEEEETTSCCEEEEECSSCSCC-CCEEEE
T ss_pred ccceeeccCCCcEEEEecC--CCccEEEEEecCCCeEEEEeC-----CCCcEEEEecCCCCcEEEEeCCCCCc-cEEEEE
Confidence 4688888888776655332 2223445543 579998732 23579999998877665532211111 22333
Q ss_pred -ECCEEEEEcccCCCCccCceEEeeCCCCeeEEeC--CCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCC
Q psy14726 489 -LQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIE--PMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTK 563 (712)
Q Consensus 489 -~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~ 563 (712)
.++.||+.-.. .+.++++++....-+.+. .+..| .++++. ++.||+.--.. ...|+++++...
T Consensus 168 ~~~g~lY~~d~~-----~~~I~~~~~dg~~~~~l~~~~l~~P---~giavdp~~g~ly~td~~~----~~~I~r~~~dG~ 235 (386)
T 3v65_B 168 WVHDKLYWTDSG-----TSRIEVANLDGAHRKVLLWQSLEKP---RAIALHPMEGTIYWTDWGN----TPRIEASSMDGS 235 (386)
T ss_dssp TTTTEEEEEETT-----TTEEEECBTTSCSCEEEECSSCSCE---EEEEEETTTTEEEEEECSS----SCEEEEEETTSC
T ss_pred eCCCeEEEEcCC-----CCeEEEEeCCCCceEEeecCCCCCC---cEEEEEcCCCeEEEeccCC----CCEEEEEeCCCC
Confidence 37899997543 246888888755433332 22222 233333 68899874321 367999998754
Q ss_pred cEEEcCCCCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCeEEEc--cCCCCcccceEEEEEcCcceeEec
Q psy14726 564 TWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA--TDMNIYRSALSACVIMGLPNVYDY 639 (712)
Q Consensus 564 ~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~--~~~p~~r~~~~~~~~~~~~~v~~~ 639 (712)
.-..+..-. -..-.++++- +++||+.-.. ...|+++|+....-..+ ..++ ...+.++.++.+|+...
T Consensus 236 ~~~~~~~~~-~~~PnGlavd~~~~~lY~aD~~-----~~~I~~~d~dG~~~~~~~~~~~~---~P~giav~~~~ly~td~ 306 (386)
T 3v65_B 236 GRRIIADTH-LFWPNGLTIDYAGRRMYWVDAK-----HHVIERANLDGSHRKAVISQGLP---HPFAITVFEDSLYWTDW 306 (386)
T ss_dssp SCEEEECSS-CSCEEEEEEEGGGTEEEEEETT-----TTEEEEECTTSCSCEEEECSSCS---SEEEEEEETTEEEEEET
T ss_pred CcEEEEECC-CCCeeeEEEeCCCCEEEEEECC-----CCEEEEEeCCCCeeEEEEECCCC---CceEEEEECCEEEEeeC
Confidence 433332111 1112244443 7899998432 24789999875432222 2232 22455667788888743
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=88.97 E-value=13 Score=43.95 Aligned_cols=146 Identities=9% Similarity=0.011 Sum_probs=78.4
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEECCEEEEEeecCCCCccceEE-EEECCCCcEEEeCCCCCCcceeEEEE
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCR-CFNAVTKVWKEIAPMNFKRCYVSTAV 441 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~-~yd~~~~~W~~~~~~~~~r~~~~~~~ 441 (712)
..++.++...+....+.. .+..+....... ++..+++++. ...++ .+|..+++...+. -...........
T Consensus 317 ~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~s-dg~~l~~~s~-----~~~l~~~~d~~~~~~~~l~-~~~~~~~~~~~S 387 (1045)
T 1k32_A 317 GQAFIQDVSGTYVLKVPE--PLRIRYVRRGGD-TKVAFIHGTR-----EGDFLGIYDYRTGKAEKFE-ENLGNVFAMGVD 387 (1045)
T ss_dssp TEEEEECTTSSBEEECSC--CSCEEEEEECSS-SEEEEEEEET-----TEEEEEEEETTTCCEEECC-CCCCSEEEEEEC
T ss_pred CEEEEEcCCCCceEEccC--CCcceEEeeeEc-CCCeEEEEEC-----CCceEEEEECCCCCceEec-CCccceeeeEEC
Confidence 356777777666554321 111011111111 4555555442 35788 9999988877665 211222222233
Q ss_pred ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEECCEEEEEcccCC-----CCccCceEEeeCCCC
Q psy14726 442 HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNG-----HNCLNSCEVYDPECN 516 (712)
Q Consensus 442 ~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~-----~~~~~~v~~yd~~~~ 516 (712)
-+|+.+++++.. .+++.+|+.+.+-..+..-........+..-+|+.+++++.++ ......++.+|..+.
T Consensus 388 pDG~~la~~~~~-----~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g 462 (1045)
T 1k32_A 388 RNGKFAVVANDR-----FEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGR 462 (1045)
T ss_dssp TTSSEEEEEETT-----SEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTT
T ss_pred CCCCEEEEECCC-----CeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCC
Confidence 466766666532 4799999999887665432222222222223676666655432 122467999999988
Q ss_pred eeEEeC
Q psy14726 517 QWTLIE 522 (712)
Q Consensus 517 ~W~~~~ 522 (712)
+...+.
T Consensus 463 ~~~~l~ 468 (1045)
T 1k32_A 463 KIFAAT 468 (1045)
T ss_dssp EEEECS
T ss_pred cEEEee
Confidence 765554
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=88.60 E-value=6.1 Score=41.29 Aligned_cols=146 Identities=9% Similarity=0.077 Sum_probs=70.7
Q ss_pred CeEEEEcccCCCCCCceeEEeecCCC--------ceEEcccCCccccceeEEEE--CCE-EEEEcccCCCCccCceEEee
Q psy14726 444 DVIYAMGGYNGQRRQNSVEKYNYTEN--------QWSLIAPMNVERSDASATTL--QGK-IYITGGFNGHNCLNSCEVYD 512 (712)
Q Consensus 444 ~~iyv~GG~~~~~~~~~v~~yd~~~~--------~W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~v~~yd 512 (712)
+.+++.|+.+ ..+.+||..+. ....+..+........+..+ ++. +++.|+.++ .+..||
T Consensus 141 ~~~lat~~~d-----g~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg-----~i~vwd 210 (430)
T 2xyi_A 141 ACVIATKTPS-----SDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDH-----TICLWD 210 (430)
T ss_dssp EEEEEEECSS-----SCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTS-----CEEEEE
T ss_pred CcEEEEECCC-----CcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCC-----eEEEEe
Confidence 4677777644 35888887652 12222221111111122223 344 777777654 577888
Q ss_pred CCCC---eeEEeC--CC-CCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCc-EEEcCCCCCCccceEEEEE
Q psy14726 513 PECN---QWTLIE--PM-RHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKT-WSQVPDMYNPRSNFAIEVI 583 (712)
Q Consensus 513 ~~~~---~W~~~~--~~-p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~~~p~~r~~~~~~~~ 583 (712)
..+. .+.... .+ .....-.+++.. ++.+++.|+.+ ..+..||..+.. ...+..+.........+.+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~ 285 (430)
T 2xyi_A 211 INATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADD-----QKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSF 285 (430)
T ss_dssp TTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETT-----SEEEEEETTCSCSSSCSEEEECCSSCEEEEEE
T ss_pred CCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCC-----CeEEEEECCCCCCCcceeEeecCCCCeEEEEe
Confidence 8762 222111 11 111112223332 45677777643 578899988652 1111111111112223333
Q ss_pred ---CCEEEEEcccCCCceeeeEEEEECCC
Q psy14726 584 ---DDMIFAIGGFNGVTTIYHVECYDEKT 609 (712)
Q Consensus 584 ---~~~i~v~GG~~~~~~~~~v~~yd~~~ 609 (712)
+..+++.|+.++ .+.+||..+
T Consensus 286 ~p~~~~~l~tg~~dg-----~v~vwd~~~ 309 (430)
T 2xyi_A 286 NPYSEFILATGSADK-----TVALWDLRN 309 (430)
T ss_dssp CSSCTTEEEEEETTS-----EEEEEETTC
T ss_pred CCCCCCEEEEEeCCC-----eEEEEeCCC
Confidence 334888888765 578888765
|
| >3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A | Back alignment and structure |
|---|
Probab=88.31 E-value=16 Score=37.36 Aligned_cols=148 Identities=9% Similarity=0.038 Sum_probs=81.3
Q ss_pred EEEEECCEEEEEeecCCCCccceEEEEECCCCcE--EEe----CCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEE
Q psy14726 391 GTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVW--KEI----APMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEK 463 (712)
Q Consensus 391 ~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W--~~~----~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~ 463 (712)
+++.+++.+|+|=| +.+|+++.....- ..+ +.+|. ....+... .++++|+|-| +.+|+
T Consensus 185 Av~~~~g~~~fFkg-------~~~Wr~~~~~~~~~p~~I~~~wpgLP~-~iDAa~~~~~~g~~~fFkg-------~~yWr 249 (365)
T 3ba0_A 185 AVTTVGNKIFFFKD-------RFFWLKVSERPKTSVNLISSLWPTLPS-GIEAAYEIEARNQVFLFKD-------DKYWL 249 (365)
T ss_dssp CEEEETTEEEEEET-------TEEEECCSSCCCCCEEEHHHHCSSCCS-SCCEEEEEGGGTEEEEEET-------TEEEE
T ss_pred eEEEcCCeEEEEeC-------CEEEEEcCCCccCCccchhhhccCCCC-CccEEEEecCCCEEEEEeC-------CEEEE
Confidence 34456899999976 3567766543221 111 23332 22222222 3789999977 56788
Q ss_pred eecCCCc--e-EEccc--CCccccce-eEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEE-----eC-CC-CCCC
Q psy14726 464 YNYTENQ--W-SLIAP--MNVERSDA-SATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTL-----IE-PM-RHRR 528 (712)
Q Consensus 464 yd~~~~~--W-~~~~~--~p~~r~~~-~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-----~~-~~-p~~r 528 (712)
|+..... + ..+.. +|..-..- +|... ++++|+|-| +..|+||..+++-.. +. .. ..+.
T Consensus 250 ~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG-------~~yw~yd~~~~~v~~gyPk~I~~~f~g~p~ 322 (365)
T 3ba0_A 250 ISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVD-------NQYWRYDERRQMMDPGYPKLITKNFQGIGP 322 (365)
T ss_dssp CSTTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCCCCHHHHSTTCCS
T ss_pred EcCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEEC-------CEEEEEeCCcceecCCCCcchhhcCCCCCC
Confidence 8754321 1 12222 23211122 33333 589999977 568999987664221 00 01 1122
Q ss_pred cceEEEEE-CCEEEEEcCCCCCCccceEEEEeCCCCcEEE
Q psy14726 529 SGVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQ 567 (712)
Q Consensus 529 ~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 567 (712)
.--++... ++++|.+-| +..|+||..+.+-..
T Consensus 323 ~iDaA~~~~~g~~YfFkg-------~~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 323 KIDAVFYSKNKYYYFFQG-------SNQFEYDFLLQRITK 355 (365)
T ss_dssp SCSEEEEETTTEEEEEET-------TEEEEEETTTTEEEE
T ss_pred ccceeeEecCCcEEEEeC-------CEEEEEECCccEEec
Confidence 23344444 889999977 578999998776544
|
| >2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=88.26 E-value=0.55 Score=38.57 Aligned_cols=67 Identities=12% Similarity=-0.047 Sum_probs=46.1
Q ss_pred ceecChhhHHHHHHHhhhcChHHHHHHHHHhhcccCC------------hhhHHHHHHHHHHcccHHHHHHHHHHHHHHH
Q psy14726 157 KLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLTT------------PRNCFGILLFSRDHFCKKLEEWTRKYILRNF 224 (712)
Q Consensus 157 ~~~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~l~------------~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f 224 (712)
.-.++.+|+..++.+|+.|++++|.+.|.+|+.+++. .+....++.- +.-.-.++.+++.+|+..+.
T Consensus 5 ~~~L~~~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF~~v~~~~eFl~L~~~~L~~lL~s-dv~~E~~vf~av~~Wv~~d~ 83 (105)
T 2eqx_A 5 SSGVQVGNCLQVMWLADRHSDPELYTAAKHCAKTHLAQLQNTEEFLHLPHRLLTDIISD-GVPCSQNPTEAIEAWINFNK 83 (105)
T ss_dssp CCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTCHHHHTSHHHHHSCHHHHHHHHHT-CEETTSCHHHHHHHHHHTTH
T ss_pred hccCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcccHhhCCHHHHHHHHcC-CCCCHHHHHHHHHHHHHcCH
Confidence 3468899999999999999999999999999977643 2222233322 21122447777777775543
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=88.24 E-value=19 Score=42.69 Aligned_cols=224 Identities=10% Similarity=-0.025 Sum_probs=115.0
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEE-ECCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCC---------
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAV-IGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNF--------- 432 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~--------- 432 (712)
..++.++...+....+.... . ....+. -+++.++++. ...++.+|........+..-..
T Consensus 226 ~~l~~~~~~g~~~~~l~~~~----~-~~~~~~SpDG~~la~~~------~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~ 294 (1045)
T 1k32_A 226 GQIYSTDLDGKDLRKHTSFT----D-YYPRHLNTDGRRILFSK------GGSIYIFNPDTEKIEKIEIGDLESPEDRIIS 294 (1045)
T ss_dssp CEEEEEETTSCSCEECCCCC----S-SCEEEEEESSSCEEEEE------TTEEEEECTTTCCEEECCCCCCCBCCSEEEE
T ss_pred eEEEEEeCCCCcceEecCCC----C-cceeeEcCCCCEEEEEe------CCEEEEecCCceEeeeeccCccccccccccc
Confidence 45777777665544432111 1 112222 2555455542 2468888886555544332110
Q ss_pred CcceeEEE-E-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEECCEEEEEcccCCCCccCceE-
Q psy14726 433 KRCYVSTA-V-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCE- 509 (712)
Q Consensus 433 ~r~~~~~~-~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~- 509 (712)
...-.+++ . -+|+..+++. ...++.++..+.....+...+..+....+.. +|+.+++++. ...++
T Consensus 295 ~~~v~~~~~S~pdG~~la~~~------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~-----~~~l~~ 362 (1045)
T 1k32_A 295 IPSKFAEDFSPLDGDLIAFVS------RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTR-----EGDFLG 362 (1045)
T ss_dssp CGGGGEEEEEECGGGCEEEEE------TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEET-----TEEEEE
T ss_pred ccccceeeecCCCCCEEEEEE------cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEEC-----CCceEE
Confidence 00122333 3 4565555544 2468888887776555433222122222233 6665555443 24688
Q ss_pred EeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEE-ECCEEE
Q psy14726 510 VYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEV-IDDMIF 588 (712)
Q Consensus 510 ~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~ 588 (712)
.||..+.+...+.. ........+..-+++.+++++.+ ..++.+|+.+++-..+........ .+++. -+++.+
T Consensus 363 ~~d~~~~~~~~l~~-~~~~~~~~~~SpDG~~la~~~~~-----~~v~~~d~~tg~~~~~~~~~~~~v-~~~~~SpDG~~l 435 (1045)
T 1k32_A 363 IYDYRTGKAEKFEE-NLGNVFAMGVDRNGKFAVVANDR-----FEIMTVDLETGKPTVIERSREAMI-TDFTISDNSRFI 435 (1045)
T ss_dssp EEETTTCCEEECCC-CCCSEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCEEEEEECSSSCC-CCEEECTTSCEE
T ss_pred EEECCCCCceEecC-CccceeeeEECCCCCEEEEECCC-----CeEEEEECCCCceEEeccCCCCCc-cceEECCCCCeE
Confidence 89998887666651 11122222222256655565532 489999999887766642111111 12222 266655
Q ss_pred EEcccCC-----CceeeeEEEEECCCCeEEEcc
Q psy14726 589 AIGGFNG-----VTTIYHVECYDEKTDEWYEAT 616 (712)
Q Consensus 589 v~GG~~~-----~~~~~~v~~yd~~~~~W~~~~ 616 (712)
++++.++ ......+++||..+++...+.
T Consensus 436 a~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~ 468 (1045)
T 1k32_A 436 AYGFPLKHGETDGYVMQAIHVYDMEGRKIFAAT 468 (1045)
T ss_dssp EEEEEECSSTTCSCCEEEEEEEETTTTEEEECS
T ss_pred EEEecCccccccCCCCCeEEEEECCCCcEEEee
Confidence 6655432 122357999999988865553
|
| >1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A | Back alignment and structure |
|---|
Probab=87.99 E-value=15 Score=34.45 Aligned_cols=144 Identities=12% Similarity=0.096 Sum_probs=77.5
Q ss_pred EEEEECCeEEEEcccCCCCCCceeEEeecCCCc-eE--Ec----ccCCccccceeEEEE--CCEEEEEcccCCCCccCce
Q psy14726 438 STAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQ-WS--LI----APMNVERSDASATTL--QGKIYITGGFNGHNCLNSC 508 (712)
Q Consensus 438 ~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~--~~----~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v 508 (712)
+++..+|++|+|=| +.+|+++..... .. .+ +.+|. ... +|... ++++|+|-| +..
T Consensus 35 Ai~~~~g~~~fFkg-------~~~Wr~~~~~~~~~~P~~I~~~wp~lp~-~ID-AA~~~~~~~k~yfFkG-------~~y 98 (218)
T 1gen_A 35 GIAQIRGEIFFFKD-------RFIWRTVTPRDKPMGPLLVATFWPELPE-KID-AVYEAPQEEKAVFFAG-------NEY 98 (218)
T ss_dssp EEEEETTEEEEEET-------TEEEEESSTTSCCEEEEEGGGTCTTSCS-CCS-EEEEETTTTEEEEEET-------TEE
T ss_pred EEEeCCCcEEEEEC-------CEEEEEeCCCCccCCCEEHHHhcCCCCC-Ccc-EEEEECCCCEEEEEeC-------CEE
Confidence 45567999999977 456666544321 11 11 22332 222 22222 689999987 568
Q ss_pred EEeeCCCCe---eEEeCC--CCCC-CcceEEEE--ECCEEEEEcCCCCCCccceEEEEeCCCCcEEEc-----C-C-CCC
Q psy14726 509 EVYDPECNQ---WTLIEP--MRHR-RSGVSCIA--YHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQV-----P-D-MYN 573 (712)
Q Consensus 509 ~~yd~~~~~---W~~~~~--~p~~-r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-----~-~-~p~ 573 (712)
|+||..+.. =..+.. +|.. ..--++.. .++++|++-| +..|+||..+++-..- . . +..
T Consensus 99 W~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG-------~~ywr~d~~~~~v~~gyPr~i~~~w~g~ 171 (218)
T 1gen_A 99 WIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG-------DKFWRYNEVKKKMDPGFPKLIADAWNAI 171 (218)
T ss_dssp EEEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCCEEHHHHSSSC
T ss_pred EEEcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEEC-------CEEEEEECccccccCCCCcchhhccCCC
Confidence 888842110 011111 2221 11223333 3689999987 5789999876632211 0 0 111
Q ss_pred CccceEEEEEC--CEEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 574 PRSNFAIEVID--DMIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 574 ~r~~~~~~~~~--~~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
+..-.++...+ +.+|++=|. ..|.||..+..
T Consensus 172 p~~idaAf~~~~~g~~YfFkg~-------~y~~~~~~~~~ 204 (218)
T 1gen_A 172 PDNLDAVVDLQGGGHSYFFKGA-------YYLKLENQSLK 204 (218)
T ss_dssp CSSCSEEEECTTTCEEEEEETT-------EEEEEETTEEE
T ss_pred CCCCCEEEEEcCCCcEEEEECC-------EEEEEECCcee
Confidence 22233444544 899999663 57888876554
|
| >3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=87.98 E-value=6.4 Score=36.24 Aligned_cols=143 Identities=10% Similarity=0.093 Sum_probs=78.4
Q ss_pred EEEEECCeEEEEcccCCCCCCceeEEeecCCCc--e-EEc----ccCCccccceeEEEECCEEEEEcccCCCCccCceEE
Q psy14726 438 STAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQ--W-SLI----APMNVERSDASATTLQGKIYITGGFNGHNCLNSCEV 510 (712)
Q Consensus 438 ~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W-~~~----~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~ 510 (712)
+++..+|++|+|-| +.+|+++...-. . ..+ +.+|. ....+....++++|++-| +..|+
T Consensus 10 A~~~~~g~~~fFkg-------~~~w~~~~~~~~~gyP~~I~~~w~glP~-~iDAa~~~~~g~~yfFkg-------~~yw~ 74 (196)
T 3c7x_A 10 TVAMLRGEMFVFKE-------RWFWRVRNNQVMDGYPMPIGQFWRGLPA-SINTAYERKDGKFVFFKG-------DKHWV 74 (196)
T ss_dssp EEEEETTEEEEEET-------TEEEEEETTEECTTCSEEHHHHSTTCCS-SCCEEEECTTSCEEEEET-------TEEEE
T ss_pred EEEEcCCEEEEEEC-------CEEEEEECCccCCCCceEhhHhccCCCC-CccEEEEeCCCcEEEecC-------CEEEE
Confidence 34467899999977 467777543110 0 111 13443 222221123788999977 45788
Q ss_pred eeCCCCee---EEeCC----CCCCCcceEEEE-ECCEEEEEcCCCCCCccceEEEEeCCCCcEEE-----c---CCCCCC
Q psy14726 511 YDPECNQW---TLIEP----MRHRRSGVSCIA-YHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQ-----V---PDMYNP 574 (712)
Q Consensus 511 yd~~~~~W---~~~~~----~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-----~---~~~p~~ 574 (712)
|+..+... ..+.. +|.....++... .++++|++-| +..++||..+++-.. + +.+|
T Consensus 75 ~~~~~~~~gyPk~I~~~~~glP~~~IDAA~~~~~~g~~yfFkG-------~~yw~yd~~~~~v~~gyPk~i~~~~gip-- 145 (196)
T 3c7x_A 75 FDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRG-------NKYYRFNEELRAVDSEYPKNIKVWEGIP-- 145 (196)
T ss_dssp EETTEECTTCSEEGGGTCBSCCSSCCSEEEEETTTTEEEEEET-------TEEEEEETTTTEECTTCSEEGGGSBTCC--
T ss_pred EeCCcccCCCCeEhhhcCCCCCCCcccEEEEEccCCEEEEEEC-------CEEEEEeCCcccccCCCCccHHHCCCcC--
Confidence 87542111 12222 342223333322 2689999987 578999987653211 1 1222
Q ss_pred ccceEEEEE-CC-EEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 575 RSNFAIEVI-DD-MIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 575 r~~~~~~~~-~~-~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
..-.++... ++ ++|++-|. ..|.||..+.+
T Consensus 146 ~~idaAf~~~~~~~~YfFkg~-------~y~r~d~~~~~ 177 (196)
T 3c7x_A 146 ESPRGSFMGSDEVFTYFYKGN-------KYWKFNNQKLK 177 (196)
T ss_dssp SSCSEEEECTTSSEEEEEETT-------EEEEEETTTTE
T ss_pred CCcceeEEecCCCEEEEEECC-------EEEEEECCcce
Confidence 222334444 44 89999663 67999988765
|
| >3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata} | Back alignment and structure |
|---|
Probab=87.77 E-value=7.1 Score=36.85 Aligned_cols=139 Identities=10% Similarity=0.040 Sum_probs=77.2
Q ss_pred ECCeEEEEcccCCCCCCceeEEee------cC---------CCceEEcccCCccccceeEEE--ECCEEEEEcccCCCCc
Q psy14726 442 HHDVIYAMGGYNGQRRQNSVEKYN------YT---------ENQWSLIAPMNVERSDASATT--LQGKIYITGGFNGHNC 504 (712)
Q Consensus 442 ~~~~iyv~GG~~~~~~~~~v~~yd------~~---------~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~ 504 (712)
.+|.+|+|-| ..+|+++ .. +..|..+++.+......-|+. .++++|+|-|
T Consensus 12 ~~ge~~fFk~-------~~~wr~~~~~~~~~~~~~~~p~~I~~~Wp~LP~~~f~~~~iDAa~~~~~g~~~fFkg------ 78 (225)
T 3oyo_A 12 SEYEVYFFAK-------NKYVRLHYTPGASSDTILTNLRLISSGFPSLAGTPFAEPGIDCSFHTEASEAYVFSG------ 78 (225)
T ss_dssp STTEEEEEET-------TEEEEEECCTTCSCCEEEEEEEEHHHHCGGGTTSTTTTTCCSEEEECSTTEEEEEET------
T ss_pred CCCEEEEEEC-------CEEEEEecccccccCcccCCceehhhhcccCCCccCCCCCEeEEEEcCCCeEEEEcC------
Confidence 4789999966 4577776 11 122332222112112333333 4899999987
Q ss_pred cCceEEeeCCC----CeeEEe--------CCCCCC----CcceEEEE--ECCEEEEEcCCCCCCccceEEEEeCCCCcEE
Q psy14726 505 LNSCEVYDPEC----NQWTLI--------EPMRHR----RSGVSCIA--YHECIYVIGGFNGMSRMCNGEKYNPVTKTWS 566 (712)
Q Consensus 505 ~~~v~~yd~~~----~~W~~~--------~~~p~~----r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 566 (712)
+.+|+||..+ +....- +.+|.. .-. ++.. .++++|++-| +..|+||..+++..
T Consensus 79 -~~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~ID-AA~~~~~~gk~yfFkG-------~~yw~~d~~~~~~~ 149 (225)
T 3oyo_A 79 -NHSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSID-SAFRSTKGKEVYLFKG-------NKYVRIAYDSKQLV 149 (225)
T ss_dssp -TEEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCC-EEEECSSTTEEEEEET-------TEEEEEETTTTEEE
T ss_pred -CEEEEEecccccCCCceecCchhhhhcCCCCCCcccccccc-eEEEECCCCcEEEEeC-------CeEEEEECCCCeec
Confidence 5688887532 222111 123321 122 2222 2689999988 57899997766554
Q ss_pred Ec----C-CCCC------CccceEEEE--ECCEEEEEcccCCCceeeeEEEEECCC
Q psy14726 567 QV----P-DMYN------PRSNFAIEV--IDDMIFAIGGFNGVTTIYHVECYDEKT 609 (712)
Q Consensus 567 ~~----~-~~p~------~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~ 609 (712)
.- . ..|. +..--++.. .++++|++-|. ..|+||..+
T Consensus 150 ~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG~-------~ywr~d~~~ 198 (225)
T 3oyo_A 150 GNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKGQ-------NYVRIDFTP 198 (225)
T ss_dssp EEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEETT-------EEEEEECCT
T ss_pred CCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEECC-------EEEEEeCCc
Confidence 31 1 1121 222334444 37999999763 679999883
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=87.66 E-value=0.16 Score=52.59 Aligned_cols=143 Identities=13% Similarity=0.208 Sum_probs=57.1
Q ss_pred EEECCeEEEEcccCCCCCCceeEEeecCCCc--eEEcccCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCCC-
Q psy14726 440 AVHHDVIYAMGGYNGQRRQNSVEKYNYTENQ--WSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECN- 516 (712)
Q Consensus 440 ~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~- 516 (712)
++.++.||+.+. + ..++.+|..+.+ |+.-. . ....+.++.++++|+.|+.+ ..+.++|.+++
T Consensus 6 ~v~~~~v~~gs~-d-----g~v~a~d~~tG~~~W~~~~--~--~~~s~p~~~~g~~~v~~s~d-----g~l~a~d~~tG~ 70 (369)
T 2hz6_A 6 TLPETLLFVSTL-D-----GSLHAVSKRTGSIKWTLKE--D--PVLQVPTHVEEPAFLPDPND-----GSLYTLGSKNNE 70 (369)
T ss_dssp --CTTEEEEEET-T-----SEEEEEETTTCCEEEEEEC--C--CSCCCC-----CCEEECTTT-----CCEEEC-----C
T ss_pred eeeCCEEEEEcC-C-----CEEEEEECCCCCEEEEecC--C--CceecceEcCCCEEEEeCCC-----CEEEEEECCCCc
Confidence 445667776533 2 468999988764 76543 1 11123344577788887544 35889998665
Q ss_pred -eeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCC--cEEEcCCCCCCccceEEEEECCEEEEEccc
Q psy14726 517 -QWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTK--TWSQVPDMYNPRSNFAIEVIDDMIFAIGGF 593 (712)
Q Consensus 517 -~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~ 593 (712)
.|+.-...+.......++..++.+|+ |+. -..+.++|+.++ .|+.-.... .+ .+..++.+| +|+.
T Consensus 71 ~~w~~~~~~~~~~~~sp~~~~~~~v~~-g~~-----dg~v~a~D~~tG~~~w~~~~~~~-~~----~~p~~~~v~-~~~~ 138 (369)
T 2hz6_A 71 GLTKLPFTIPELVQASPCRSSDGILYM-GKK-----QDIWYVIDLLTGEKQQTLSSAFA-DS----LSPSTSLLY-LGRT 138 (369)
T ss_dssp CSEECSCCHHHHHTTCSCC-----CCC-CEE-----EEEEEEECCC---------------------------EE-EEEE
T ss_pred eeeeeeccCccccccCceEecCCEEEE-EeC-----CCEEEEEECCCCcEEEEecCCCc-cc----ccccCCEEE-EEec
Confidence 46532211100000001113555554 332 246889998865 465432211 01 111344444 4433
Q ss_pred CCCceeeeEEEEECCCCe--EEE
Q psy14726 594 NGVTTIYHVECYDEKTDE--WYE 614 (712)
Q Consensus 594 ~~~~~~~~v~~yd~~~~~--W~~ 614 (712)
+ ..+..||+.+++ |+.
T Consensus 139 d-----g~v~a~d~~tG~~~W~~ 156 (369)
T 2hz6_A 139 E-----YTITMYDTKTRELRWNA 156 (369)
T ss_dssp E-----EEEECCCSSSSSCCCEE
T ss_pred C-----CEEEEEECCCCCEEEeE
Confidence 2 257788877654 764
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=87.43 E-value=27 Score=35.59 Aligned_cols=114 Identities=8% Similarity=-0.128 Sum_probs=57.7
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE--CCEEEEEeecC----CCCccceEEEEECCC
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI--GYNIYVIGGFD----GNEYYNSCRCFNAVT 421 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~----~~~~~~~v~~yd~~~ 421 (712)
..+|+.-+....... .+..||+.+++-.. . ++..... .+++. +..+|+..-.. .+...+.+..||+.+
T Consensus 33 ~~~yv~~~~~~~~~~-~v~v~D~~t~~~~~--~--i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t 106 (373)
T 2mad_H 33 RRSYINLPAHHSAII-QQWVLDAGSGSILG--H--VNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT 106 (373)
T ss_pred CEEEEeCCcccCCcc-EEEEEECCCCeEEE--E--ecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC
Confidence 557776531111111 78899998877442 1 2222222 34443 56788875321 112246788999987
Q ss_pred CcEEEeCCCC-CCc-----ceeEEEE--ECCeEEEEcccCCCCCCceeEEeecCCCceE
Q psy14726 422 KVWKEIAPMN-FKR-----CYVSTAV--HHDVIYAMGGYNGQRRQNSVEKYNYTENQWS 472 (712)
Q Consensus 422 ~~W~~~~~~~-~~r-----~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 472 (712)
.+-..--+++ .+| .-..++. -+..+|+..-. ..+.+.++| .+++-.
T Consensus 107 ~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~----~~~~v~viD-~t~~~~ 160 (373)
T 2mad_H 107 FLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFA----AGPAVGLVV-QGGSSD 160 (373)
T ss_pred CcEEEEEECCCccccccCCCccceEECCCCCEEEEEecC----CCCeEEEEE-CCCCEE
Confidence 6543211222 111 1122333 24467775311 136789999 877643
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=87.23 E-value=29 Score=35.71 Aligned_cols=151 Identities=11% Similarity=0.137 Sum_probs=75.2
Q ss_pred CCeEEEEcccCCCCCCceeEEeecCCC--ceEEcccCC----ccccceeEEEE--CC-EEEEEcccCCCCccCceEEeeC
Q psy14726 443 HDVIYAMGGYNGQRRQNSVEKYNYTEN--QWSLIAPMN----VERSDASATTL--QG-KIYITGGFNGHNCLNSCEVYDP 513 (712)
Q Consensus 443 ~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~p----~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~v~~yd~ 513 (712)
++++++.| .+ ..+..||..+. .+..+...| .......++.+ ++ .+++.|+.++ .+..||.
T Consensus 188 ~~~~l~s~-~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg-----~i~iwd~ 256 (447)
T 3dw8_B 188 DYETYLSA-DD-----LRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKG-----TIRLCDM 256 (447)
T ss_dssp TSSEEEEE-CS-----SEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTS-----CEEEEET
T ss_pred CCCEEEEe-CC-----CeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCC-----eEEEEEC
Confidence 55666665 22 56888888732 233221111 11112223333 44 7888887664 5888888
Q ss_pred CCCee-----EEeCCCCCC--C-------cceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCC-CcEE-EcCCCCCCc
Q psy14726 514 ECNQW-----TLIEPMRHR--R-------SGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVT-KTWS-QVPDMYNPR 575 (712)
Q Consensus 514 ~~~~W-----~~~~~~p~~--r-------~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~-~~W~-~~~~~p~~r 575 (712)
.+.+. ..+.....+ + .....+.+ ++++++.|+. ..+..||..+ .+-. .+......+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~------~~v~iwd~~~~~~~~~~~~~~~~~~ 330 (447)
T 3dw8_B 257 RASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY------LSVKVWDLNMENRPVETYQVHEYLR 330 (447)
T ss_dssp TTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES------SEEEEEETTCCSSCSCCEESCGGGT
T ss_pred cCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC------CeEEEEeCCCCccccceeecccccc
Confidence 87663 223211110 0 02222222 4666666652 5788999875 3210 000000000
Q ss_pred c-------------ceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCeEEEc
Q psy14726 576 S-------------NFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 576 ~-------------~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
. ...++.. ++..++.|+.++ .+.+||..+++-..+
T Consensus 331 ~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg-----~v~iwd~~~~~~~~~ 379 (447)
T 3dw8_B 331 SKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNN-----FFRMFDRNTKRDITL 379 (447)
T ss_dssp TTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTT-----EEEEEETTTCCEEEE
T ss_pred ccccccccccccccceEEEECCCCCEEEEeccCC-----EEEEEEcCCCcceee
Confidence 0 0113332 566678888765 688999988876543
|
| >3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A | Back alignment and structure |
|---|
Probab=86.91 E-value=19 Score=36.75 Aligned_cols=145 Identities=8% Similarity=0.004 Sum_probs=81.2
Q ss_pred EEEEECCeEEEEcccCCCCCCceeEEeecCCCce--EEc----ccCCccccceeEEEE--CCEEEEEcccCCCCccCceE
Q psy14726 438 STAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQW--SLI----APMNVERSDASATTL--QGKIYITGGFNGHNCLNSCE 509 (712)
Q Consensus 438 ~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W--~~~----~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~ 509 (712)
+++..+|++|+|=| ..+|+++.....- ..+ +.+|. ... ++... ++++|+|-| +..|
T Consensus 185 Av~~~~g~~~fFkg-------~~~Wr~~~~~~~~~p~~I~~~wpgLP~-~iD-Aa~~~~~~g~~~fFkg-------~~yW 248 (365)
T 3ba0_A 185 AVTTVGNKIFFFKD-------RFFWLKVSERPKTSVNLISSLWPTLPS-GIE-AAYEIEARNQVFLFKD-------DKYW 248 (365)
T ss_dssp CEEEETTEEEEEET-------TEEEECCSSCCCCCEEEHHHHCSSCCS-SCC-EEEEEGGGTEEEEEET-------TEEE
T ss_pred eEEEcCCeEEEEeC-------CEEEEEcCCCccCCccchhhhccCCCC-Ccc-EEEEecCCCEEEEEeC-------CEEE
Confidence 34557999999966 4567776544221 111 23342 222 23333 789999977 4567
Q ss_pred EeeCCCCe--e-EEeCC--CCCCC-cceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCcEEEc---------CCCC
Q psy14726 510 VYDPECNQ--W-TLIEP--MRHRR-SGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQV---------PDMY 572 (712)
Q Consensus 510 ~yd~~~~~--W-~~~~~--~p~~r-~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~---------~~~p 572 (712)
+|+..+.. + ..+.. +|... .--++... ++++|+|-| +..|+||..+.+-..- +.+
T Consensus 249 r~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG-------~~yw~yd~~~~~v~~gyPk~I~~~f~g~- 320 (365)
T 3ba0_A 249 LISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVD-------NQYWRYDERRQMMDPGYPKLITKNFQGI- 320 (365)
T ss_dssp ECSTTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCCCCHHHHSTTC-
T ss_pred EEcCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEEC-------CEEEEEeCCcceecCCCCcchhhcCCCC-
Confidence 77654221 1 12322 23211 11233333 589999987 5789999876542211 112
Q ss_pred CCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCeEEE
Q psy14726 573 NPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEWYE 614 (712)
Q Consensus 573 ~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 614 (712)
+..--++... ++++|+|=| +..|.||..+.+-..
T Consensus 321 -p~~iDaA~~~~~g~~YfFkg-------~~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 321 -GPKIDAVFYSKNKYYYFFQG-------SNQFEYDFLLQRITK 355 (365)
T ss_dssp -CSSCSEEEEETTTEEEEEET-------TEEEEEETTTTEEEE
T ss_pred -CCccceeeEecCCcEEEEeC-------CEEEEEECCccEEec
Confidence 2223344555 899999966 368999998876544
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=86.90 E-value=8.4 Score=38.06 Aligned_cols=188 Identities=18% Similarity=0.192 Sum_probs=94.0
Q ss_pred ceEEEEECC-CCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCc--EEEeCCCCCCcceeE
Q psy14726 363 DFVETYDTR-ADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKV--WKEIAPMNFKRCYVS 438 (712)
Q Consensus 363 ~~v~~~d~~-~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~~~~r~~~~ 438 (712)
..+.+||+. ...|... ...+ ...+.+.. ++.||+. .. ...+++||+. ++ |..-.+ .... .+
T Consensus 117 ~~l~~~d~~g~~~~~~~--~~~~---~~~~~~~~~~g~l~vg-t~-----~~~l~~~d~~-g~~~~~~~~~--~~~~-~~ 181 (330)
T 3hxj_A 117 GHLYAINTDGTEKWRFK--TKKA---IYATPIVSEDGTIYVG-SN-----DNYLYAINPD-GTEKWRFKTN--DAIT-SA 181 (330)
T ss_dssp SEEEEECTTSCEEEEEE--CSSC---CCSCCEECTTSCEEEE-CT-----TSEEEEECTT-SCEEEEEECS--SCCC-SC
T ss_pred CEEEEEcCCCCEEEEEc--CCCc---eeeeeEEcCCCEEEEE-cC-----CCEEEEECCC-CCEeEEEecC--CCce-ee
Confidence 468889987 3356552 1111 11222333 5677763 22 2468999998 43 654322 2211 22
Q ss_pred EEE-ECCeEEEEcccCCCCCCceeEEeecCC-CceEEcccCCccccceeEEEE-CCEEEEEcccCCCCccCceEEeeCCC
Q psy14726 439 TAV-HHDVIYAMGGYNGQRRQNSVEKYNYTE-NQWSLIAPMNVERSDASATTL-QGKIYITGGFNGHNCLNSCEVYDPEC 515 (712)
Q Consensus 439 ~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~-~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~ 515 (712)
.+. .++.||+.. ..+++||... ..|+..... .. -.+.+.- ++.||+... + ..+.+||+..
T Consensus 182 ~~~d~~g~l~v~t--------~~l~~~d~~g~~~~~~~~~~--~~-~~~~~~~~~g~l~v~t~-~-----~gl~~~~~~g 244 (330)
T 3hxj_A 182 ASIGKDGTIYFGS--------DKVYAINPDGTEKWNFYAGY--WT-VTRPAISEDGTIYVTSL-D-----GHLYAINPDG 244 (330)
T ss_dssp CEECTTCCEEEES--------SSEEEECTTSCEEEEECCSS--CC-CSCCEECTTSCEEEEET-T-----TEEEEECTTS
T ss_pred eEEcCCCEEEEEe--------CEEEEECCCCcEEEEEccCC--cc-eeceEECCCCeEEEEcC-C-----CeEEEECCCC
Confidence 333 467888754 4588888432 246644221 11 1222223 457887532 1 3588888755
Q ss_pred Ce-eEEeCCCCCCCcceEEEEE-CCEEEEEcCCCCCCccceEEEEeCCCC-cEEEcCCCCCCccceEEEE-ECCEEEEEc
Q psy14726 516 NQ-WTLIEPMRHRRSGVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTK-TWSQVPDMYNPRSNFAIEV-IDDMIFAIG 591 (712)
Q Consensus 516 ~~-W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~-~W~~~~~~p~~r~~~~~~~-~~~~i~v~G 591 (712)
.. |+....-+ ... +.+.. ++.||+... ...+.+||+... .|..-. +... ..+.+. -++.||+ |
T Consensus 245 ~~~~~~~~~~~--~~~-~~~~~~~g~l~v~t~------~ggl~~~d~~g~~~~~~~~--~~~~-~~~~~~d~~g~l~~-g 311 (330)
T 3hxj_A 245 TEKWRFKTGKR--IES-SPVIGNTDTIYFGSY------DGHLYAINPDGTEKWNFET--GSWI-IATPVIDENGTIYF-G 311 (330)
T ss_dssp CEEEEEECSSC--CCS-CCEECTTSCEEEECT------TCEEEEECTTSCEEEEEEC--SSCC-CSCCEECTTCCEEE-E
T ss_pred CEeEEeeCCCC--ccc-cceEcCCCeEEEecC------CCCEEEECCCCcEEEEEEc--CCcc-ccceEEcCCCEEEE-E
Confidence 44 55443211 111 12333 678887543 136889997433 465432 2211 223333 4677776 5
Q ss_pred ccCC
Q psy14726 592 GFNG 595 (712)
Q Consensus 592 G~~~ 595 (712)
+.++
T Consensus 312 t~~G 315 (330)
T 3hxj_A 312 TRNG 315 (330)
T ss_dssp CTTS
T ss_pred cCCC
Confidence 5444
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=86.58 E-value=29 Score=34.99 Aligned_cols=214 Identities=12% Similarity=0.015 Sum_probs=120.3
Q ss_pred eEEEEECCCCcEEEcccCCCCCCCcceEEEEE--CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE
Q psy14726 364 FVETYDTRADRWVKIEQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV 441 (712)
Q Consensus 364 ~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~ 441 (712)
.|..+++.......+. . ......++++. ++.||+.--. ...++++++.......+...... .-.++++
T Consensus 54 ~I~~i~~~g~~~~~~~-~---~~~~~~~l~~d~~~~~ly~~D~~-----~~~I~r~~~~g~~~~~~~~~~~~-~p~glav 123 (349)
T 3v64_C 54 DIRQVLPHRSEYTLLL-N---NLENAIALDFHHRRELVFWSDVT-----LDRILRANLNGSNVEEVVSTGLE-SPGGLAV 123 (349)
T ss_dssp CEEEECTTSCCEEEEE-C---SCSCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECSSCS-CCCEEEE
T ss_pred ceEEEeCCCCeeEEee-c---CCCceEEEEEeccccEEEEEecc-----CCceEEEecCCCCceEEEeCCCC-CccEEEE
Confidence 4677777777665532 1 12223455554 6789987432 35789999988765554222111 1123444
Q ss_pred --ECCeEEEEcccCCCCCCceeEEeecCCCceEEcc--cCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCC
Q psy14726 442 --HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA--PMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPEC 515 (712)
Q Consensus 442 --~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~ 515 (712)
.++.||+.-.. .+.++++++....-..+. .+..| .++++- ++.||+.--.. ...++++++..
T Consensus 124 d~~~g~ly~~d~~-----~~~I~~~~~dG~~~~~l~~~~l~~P---~~iavdp~~g~ly~td~~~----~~~I~r~~~dG 191 (349)
T 3v64_C 124 DWVHDKLYWTDSG-----TSRIEVANLDGAHRKVLLWQSLEKP---RAIALHPMEGTIYWTDWGN----TPRIEASSMDG 191 (349)
T ss_dssp ETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECTTCSCE---EEEEEETTTTEEEEEECSS----SCEEEEEETTS
T ss_pred ecCCCeEEEEcCC-----CCeEEEEcCCCCceEEEEeCCCCCc---ceEEEecCcCeEEEeccCC----CCEEEEEeCCC
Confidence 47899997432 357899998766543332 22222 123333 68899875322 35799999876
Q ss_pred CeeEEeCCCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEECCEEEEEccc
Q psy14726 516 NQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGF 593 (712)
Q Consensus 516 ~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~ 593 (712)
..-+.+..-.. ..-.+.+.- +++||+.-.. ...|+++|+....-..+.... ...-.++++.++.||+.-..
T Consensus 192 ~~~~~~~~~~~-~~PnGla~d~~~~~lY~aD~~-----~~~I~~~~~dG~~~~~~~~~~-~~~P~giav~~~~ly~td~~ 264 (349)
T 3v64_C 192 SGRRIIADTHL-FWPNGLTIDYAGRRMYWVDAK-----HHVIERANLDGSHRKAVISQG-LPHPFAITVFEDSLYWTDWH 264 (349)
T ss_dssp CSCEESCCSSC-SCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECSS-CSSEEEEEEETTEEEEEETT
T ss_pred CCcEEEEECCC-CCcceEEEeCCCCEEEEEECC-----CCEEEEEeCCCCceEEEEeCC-CCCceEEEEECCEEEEecCC
Confidence 54444422111 112233432 6899998532 368999998754322221111 12235666789999998433
Q ss_pred CCCceeeeEEEEECCCCe
Q psy14726 594 NGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 594 ~~~~~~~~v~~yd~~~~~ 611 (712)
+ ..|..+|..+++
T Consensus 265 ~-----~~V~~~~~~~G~ 277 (349)
T 3v64_C 265 T-----KSINSANKFTGK 277 (349)
T ss_dssp T-----TEEEEEETTTCC
T ss_pred C-----CeEEEEEccCCC
Confidence 2 368888865543
|
| >3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A | Back alignment and structure |
|---|
Probab=86.57 E-value=0.32 Score=48.16 Aligned_cols=34 Identities=9% Similarity=0.292 Sum_probs=31.2
Q ss_pred cCChhhHHHHHHHHHHcccHHHHHHHHHHHHHHH
Q psy14726 191 LTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNF 224 (712)
Q Consensus 191 ~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f 224 (712)
.++.+|+..++.+|+.++++.|.+.|.+|+.+++
T Consensus 106 ~i~~~~v~~ll~~A~~l~i~~L~~~c~~~L~~~l 139 (279)
T 3i3n_A 106 RVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKL 139 (279)
T ss_dssp EEETTTHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred ccCHHHHHHHHHHHHHHCcHHHHHHHHHHHHHcC
Confidence 5678999999999999999999999999998864
|
| >2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens} | Back alignment and structure |
|---|
Probab=86.41 E-value=1.2 Score=36.58 Aligned_cols=33 Identities=6% Similarity=0.068 Sum_probs=30.9
Q ss_pred cCChhhHHHHHHHHHHcccHHHHHHHHHHHHHH
Q psy14726 191 LTTPRNCFGILLFSRDHFCKKLEEWTRKYILRN 223 (712)
Q Consensus 191 ~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~ 223 (712)
.++.+|+..++.+|+.++++.|.+.|.+|+.++
T Consensus 76 ~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~ 108 (109)
T 2vkp_A 76 DLEADTVLATLYAAKKYIVPALAKACVNFLETS 108 (109)
T ss_dssp CCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh
Confidence 577899999999999999999999999999876
|
| >2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} | Back alignment and structure |
|---|
Probab=86.36 E-value=29 Score=34.73 Aligned_cols=215 Identities=11% Similarity=0.134 Sum_probs=108.2
Q ss_pred ceEEEEECCCCcEEEcccCC----CCCCCcceEEEEE----CCEEEEEeec------CCC--CccceEEEEECC---CCc
Q psy14726 363 DFVETYDTRADRWVKIEQVD----PMGPRAYHGTAVI----GYNIYVIGGF------DGN--EYYNSCRCFNAV---TKV 423 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~----~~~~r~~~~~~~~----~~~lyv~GG~------~~~--~~~~~v~~yd~~---~~~ 423 (712)
..|..+|+..+.-..+.... ........++.+. ++.|+++.-. .+. ...+.+.+||+. +++
T Consensus 35 g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~ 114 (334)
T 2p9w_A 35 GRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSK 114 (334)
T ss_dssp TEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCC
T ss_pred CEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCC
Confidence 46888999866544432211 1112223556662 5788886321 011 124669999988 543
Q ss_pred --EEE-eCCCCCC-------cce-e-EEE-EECCeEEEEcccCCCCCCceeEEeecCCCc---eEEcccCCccccceeEE
Q psy14726 424 --WKE-IAPMNFK-------RCY-V-STA-VHHDVIYAMGGYNGQRRQNSVEKYNYTENQ---WSLIAPMNVERSDASAT 487 (712)
Q Consensus 424 --W~~-~~~~~~~-------r~~-~-~~~-~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~---W~~~~~~p~~r~~~~~~ 487 (712)
|.. ++..... +.. . -++ --+|.+||.|.... ..++++||.... |-.-.+....+.+....
T Consensus 115 ~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~----~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGI 190 (334)
T 2p9w_A 115 PVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGM----PAIARVSADGKTVSTFAWESGNGGQRPGYSGI 190 (334)
T ss_dssp CSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESS----CEEEEECTTSCCEEEEEECCCCSSSCCSCSEE
T ss_pred EEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCC----CeEEEEeCCCCEEeeeeecCCCcccccCcceE
Confidence 542 2111111 221 1 122 23689999765421 469999998653 54333334456566555
Q ss_pred EE---CCEEEEEcccCCCCccCceEEeeCCCCeeEEeC----CCC-CCCcceE--EEEECCEEEEEcCCCCCCccceEEE
Q psy14726 488 TL---QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIE----PMR-HRRSGVS--CIAYHECIYVIGGFNGMSRMCNGEK 557 (712)
Q Consensus 488 ~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~----~~p-~~r~~~~--~~~~~~~iyv~GG~~~~~~~~~v~~ 557 (712)
++ +..|++..+ . ..+.+||..+-....++ ... .....-+ ....+|++.+++-. .+.++.
T Consensus 191 v~~pdg~~Liv~~~-~-----g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~-----~~~~~~ 259 (334)
T 2p9w_A 191 TFDPHSNKLIAFGG-P-----RALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGAR-----APYAIS 259 (334)
T ss_dssp EEETTTTEEEEESS-S-----SSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEE-----TTEEEE
T ss_pred EEeCCCCEEEEEcC-C-----CeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEEcC-----CCCEEE
Confidence 54 346676665 3 45889998743320111 000 0011112 23368888555431 133444
Q ss_pred EeCCCCcEEEcC---CCCC---CccceEEEE----ECCEEEEEccc
Q psy14726 558 YNPVTKTWSQVP---DMYN---PRSNFAIEV----IDDMIFAIGGF 593 (712)
Q Consensus 558 yd~~~~~W~~~~---~~p~---~r~~~~~~~----~~~~i~v~GG~ 593 (712)
+-...+ |.... ..|. ++....+++ .+++||++.++
T Consensus 260 l~S~Dg-W~sa~~~g~~~~~~~~~g~tt~t~~~~~~~~~iYvv~~~ 304 (334)
T 2p9w_A 260 FRSWDN-WKSANIKKTKRSELQNSGFTAVADYYQGSEQGLYAVSAF 304 (334)
T ss_dssp EECSST-TSEEEEEEEECGGGGSSCEEEEEEEEETTEEEEEEEECC
T ss_pred EECCCC-cceeEEeeeecCccccCceeEEEEeccccCCeEEEEeee
Confidence 444444 87652 2222 343334444 58899998754
|
| >3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B | Back alignment and structure |
|---|
Probab=85.62 E-value=0.3 Score=47.63 Aligned_cols=34 Identities=3% Similarity=-0.034 Sum_probs=30.5
Q ss_pred cCChhhHHHHHHHHHHcccHHHHHHHHHHHHHHH
Q psy14726 191 LTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNF 224 (712)
Q Consensus 191 ~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f 224 (712)
.++.+|+..++.+|+.++++.|.+.|.+|+.+++
T Consensus 98 ~i~~~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l 131 (256)
T 3hve_A 98 RLNEDTIQDVVQAADLLLLTDLKTLCCEFLEGCI 131 (256)
T ss_dssp CCC-CCHHHHHHHHHHHTCHHHHHHHHHHHHHTC
T ss_pred cccHhHHHHHHHHHHHHChHHHHHHHHHHHHhhC
Confidence 5788999999999999999999999999998764
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=85.44 E-value=29 Score=35.12 Aligned_cols=115 Identities=13% Similarity=0.110 Sum_probs=58.5
Q ss_pred CEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEE-C-CeEEEEcccCCC----CCCceeEEeecCCCc
Q psy14726 397 YNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH-H-DVIYAMGGYNGQ----RRQNSVEKYNYTENQ 470 (712)
Q Consensus 397 ~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~-~~iyv~GG~~~~----~~~~~v~~yd~~~~~ 470 (712)
..+|+.-........+.++.||+.+++-.. .++..... .++.. + ..+|+..-..+. ...+.+..||+.+.+
T Consensus 16 ~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~--~i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~ 92 (361)
T 2oiz_A 16 NRIYVMDSVFMHLTESRVHVYDYTNGKFLG--MVPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLT 92 (361)
T ss_dssp GEEEEEECCGGGGGGCEEEEEETTTCCEEE--EEECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCC
T ss_pred CEEEEECCCCCccccCeEEEEECCCCeEEE--EecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCc
Confidence 356766432111123578999998887542 23333333 33333 3 478887522110 123569999988755
Q ss_pred eEEcccCCccc----cceeEEEE---CCEEEEEcccCCCCccCceEEeeCCCCee
Q psy14726 471 WSLIAPMNVER----SDASATTL---QGKIYITGGFNGHNCLNSCEVYDPECNQW 518 (712)
Q Consensus 471 W~~~~~~p~~r----~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 518 (712)
-...-+++..+ .......+ +..+|+.... ..+++.+||..+++-
T Consensus 93 ~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~----~~~~v~v~d~~~~~~ 143 (361)
T 2oiz_A 93 FEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNAS----PATSIGIVDVAKGDY 143 (361)
T ss_dssp EEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEES----SSEEEEEEETTTTEE
T ss_pred EEEEEEcCccccccCCCcceEEECCCCCEEEEECCC----CCCeEEEEECCCCcE
Confidence 32211112111 11222333 4467776421 125788899888754
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=85.06 E-value=16 Score=41.10 Aligned_cols=214 Identities=9% Similarity=-0.023 Sum_probs=114.2
Q ss_pred eEEEEECCCCcEEEcccCCCCCCCcceEEEEE--CCEEEEEeecCCCCccceEEEEECCC----CcEEEeC--CCCCCcc
Q psy14726 364 FVETYDTRADRWVKIEQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVT----KVWKEIA--PMNFKRC 435 (712)
Q Consensus 364 ~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~----~~W~~~~--~~~~~r~ 435 (712)
.|..++........+. +.....+++++. ++.||+.-.. ...|+++++.. ..-..+. .+..|
T Consensus 387 ~I~~id~~~~~~~~~~----~~~~~p~gla~d~~~~~Ly~sD~~-----~~~I~~~~~~g~~~~~~~~~~i~~~~~~P-- 455 (699)
T 1n7d_A 387 EVRKMTLDRSEYTSLI----PNLRNVVALDTEVASNRIYWSDLS-----QRMICSTQLDRAHGVSSYDTVISRDIQAP-- 455 (699)
T ss_dssp C-CEECTTSCCEECCS----CCCTTCCCCEEETTTTEEEECCTT-----TTSBEEEESCCCCC-CCCCCBCCSCC--C--
T ss_pred ceEEEeCCCCcceeee----ccCcceEEEccccccCeEEEEecC-----CCeEEEEecCCCCCCcceEEEEeCCCCCc--
Confidence 4566677766665431 112233455554 6788877432 24688888875 1111111 11111
Q ss_pred eeEEEE--ECCeEEEEcccCCCCCCceeEEeecCCCceEEccc--CCccccceeEEE--ECCEEEEEcccCCCCccCceE
Q psy14726 436 YVSTAV--HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAP--MNVERSDASATT--LQGKIYITGGFNGHNCLNSCE 509 (712)
Q Consensus 436 ~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~--~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~ 509 (712)
.++++ .+++||+.-. ..+.|+++|+....-..+.. +..++ ++++ .++.||+..-. ....++
T Consensus 456 -~glavD~~~g~LY~tD~-----~~~~I~v~d~dg~~~~~l~~~~~~~P~---giavDp~~g~ly~td~~----~~~~I~ 522 (699)
T 1n7d_A 456 -DGLAVDWIHSNIYWTDS-----VLGTVSVADTKGVKRKTLFREQGSKPR---AIVVDPVHGFMYWTDWG----TPAKIK 522 (699)
T ss_dssp -CCEECCCSSSBCEECCT-----TTSCEEEEBSSSCCEEEECCCSSCCCC---CEECCSSSSCCEECCCS----SSCCEE
T ss_pred -ceEEEEeeCCcEEEEec-----cCCeEEEEecCCCceEEEEeCCCCCcc---eEEEccCCCcEEEcccC----CCCeEE
Confidence 23443 4688998632 23568999988765444422 22221 2222 26788876421 125688
Q ss_pred EeeCCCCeeEEeC--CCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCC-CCccceEEEEEC
Q psy14726 510 VYDPECNQWTLIE--PMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMY-NPRSNFAIEVID 584 (712)
Q Consensus 510 ~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p-~~r~~~~~~~~~ 584 (712)
++++....-+.+. .+..| .++++- +++||+.-.. ...|+++|+....-..+...+ ......++++.+
T Consensus 523 ~~~~dG~~~~~l~~~~l~~P---nGlavd~~~~~LY~aD~~-----~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~ 594 (699)
T 1n7d_A 523 KGGLNGVDIYSLVTENIQWP---NGITLDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE 594 (699)
T ss_dssp BCCSSSCCCCEESCSSCSSC---CCEEECTTTCCEEEEETT-----TTEEEEECSSSSCCEEECCCSSSCSSCCCCEEET
T ss_pred EEeCCCCCeeEEEeCCCCCc---cEEEEeccCCEEEEEecC-----CCeEEEEccCCCceEEEEecCCcCCCceEeEEEC
Confidence 8887654433332 22222 123332 5789998642 467999998754333333221 112334667778
Q ss_pred CEEEEEcccCCCceeeeEEEEECCCCeEEE
Q psy14726 585 DMIFAIGGFNGVTTIYHVECYDEKTDEWYE 614 (712)
Q Consensus 585 ~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 614 (712)
+.||+.-.. ...|.++|+.+++-..
T Consensus 595 ~~lywtd~~-----~~~V~~~d~~~G~~~~ 619 (699)
T 1n7d_A 595 DKVFWTDII-----NEAIFSANRLTGSDVN 619 (699)
T ss_dssp TEEEEECST-----TTCEEEEETTTEEEEE
T ss_pred CEEEEEeCC-----CCeEEEEEccCCCceE
Confidence 899998532 2368999987765443
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=84.99 E-value=34 Score=34.41 Aligned_cols=201 Identities=8% Similarity=-0.005 Sum_probs=112.2
Q ss_pred ceEEEEECCCCcEEEeCCCCCCcceeEEEE--ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEE-
Q psy14726 412 NSCRCFNAVTKVWKEIAPMNFKRCYVSTAV--HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATT- 488 (712)
Q Consensus 412 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~- 488 (712)
..+.++++.......+.+- .....+++. .++.||+.-- ....++++++.....+.+........ .+.++
T Consensus 53 ~~I~~i~~~g~~~~~~~~~--~~~~~~l~~d~~~~~ly~~D~-----~~~~I~r~~~~g~~~~~~~~~~~~~p-~glavd 124 (349)
T 3v64_C 53 IDIRQVLPHRSEYTLLLNN--LENAIALDFHHRRELVFWSDV-----TLDRILRANLNGSNVEEVVSTGLESP-GGLAVD 124 (349)
T ss_dssp SCEEEECTTSCCEEEEECS--CSCEEEEEEETTTTEEEEEET-----TTTEEEEEETTSCSCEEEECSSCSCC-CEEEEE
T ss_pred cceEEEeCCCCeeEEeecC--CCceEEEEEeccccEEEEEec-----cCCceEEEecCCCCceEEEeCCCCCc-cEEEEe
Confidence 4578888888777655332 122344444 3679998742 23579999998876555422111111 23333
Q ss_pred -ECCEEEEEcccCCCCccCceEEeeCCCCeeEEeC--CCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCC
Q psy14726 489 -LQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIE--PMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTK 563 (712)
Q Consensus 489 -~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~ 563 (712)
.++.||+.-.. .+.++++++....-+.+. .+..| .++++. ++.||+.--.. ...|+++++...
T Consensus 125 ~~~g~ly~~d~~-----~~~I~~~~~dG~~~~~l~~~~l~~P---~~iavdp~~g~ly~td~~~----~~~I~r~~~dG~ 192 (349)
T 3v64_C 125 WVHDKLYWTDSG-----TSRIEVANLDGAHRKVLLWQSLEKP---RAIALHPMEGTIYWTDWGN----TPRIEASSMDGS 192 (349)
T ss_dssp TTTTEEEEEETT-----TTEEEEEETTSCSCEEEECTTCSCE---EEEEEETTTTEEEEEECSS----SCEEEEEETTSC
T ss_pred cCCCeEEEEcCC-----CCeEEEEcCCCCceEEEEeCCCCCc---ceEEEecCcCeEEEeccCC----CCEEEEEeCCCC
Confidence 37899997543 257888888765433332 22222 233443 68899885321 367999998765
Q ss_pred cEEEcCCCCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCeEEEccCCCCcccceEEEEEcCcceeEec
Q psy14726 564 TWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACVIMGLPNVYDY 639 (712)
Q Consensus 564 ~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~~~v~~~ 639 (712)
.-+.+..-.. ..-.++++- +++||+.-.. ...|+.+|+....-..+.... .....+.++.++.+|+...
T Consensus 193 ~~~~~~~~~~-~~PnGla~d~~~~~lY~aD~~-----~~~I~~~~~dG~~~~~~~~~~-~~~P~giav~~~~ly~td~ 263 (349)
T 3v64_C 193 GRRIIADTHL-FWPNGLTIDYAGRRMYWVDAK-----HHVIERANLDGSHRKAVISQG-LPHPFAITVFEDSLYWTDW 263 (349)
T ss_dssp SCEESCCSSC-SCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECSS-CSSEEEEEEETTEEEEEET
T ss_pred CcEEEEECCC-CCcceEEEeCCCCEEEEEECC-----CCEEEEEeCCCCceEEEEeCC-CCCceEEEEECCEEEEecC
Confidence 4444422111 112344443 7899998432 247899998754333321111 1123455667888888743
|
| >3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A | Back alignment and structure |
|---|
Probab=84.89 E-value=4.8 Score=38.11 Aligned_cols=101 Identities=11% Similarity=0.062 Sum_probs=57.7
Q ss_pred EECCeEEEEcccCCCCCCceeEEee--cCCCceE------Ec----ccCC----ccccceeEEEE--CCEEEEEcccCCC
Q psy14726 441 VHHDVIYAMGGYNGQRRQNSVEKYN--YTENQWS------LI----APMN----VERSDASATTL--QGKIYITGGFNGH 502 (712)
Q Consensus 441 ~~~~~iyv~GG~~~~~~~~~v~~yd--~~~~~W~------~~----~~~p----~~r~~~~~~~~--~~~iyv~GG~~~~ 502 (712)
..+|++|+|-| +.+|+|+ +.+.... .+ +.+| ..... +|... ++++|+|-|
T Consensus 70 ~~~g~~~fFKg-------~~~Wr~~~~~~~~~~~~~~gP~~I~~~w~gLp~~~~p~~ID-AA~~~~~~~k~yfFkG---- 137 (227)
T 3lp9_A 70 TENNEAFIFYE-------NFCALIDYAPHSKKDKIILGPKKIADVFPFFEGTVFESGID-AAYRSTRGKEVYLFKG---- 137 (227)
T ss_dssp CSTTEEEEEET-------TEEEEEECCTTTCCCEEEEEEEEHHHHSGGGTTSTTTTCCS-EEEECSSTTEEEEEET----
T ss_pred CCCCEEEEEeC-------CEEEEEeCCCCccccccccCceEHhhhcCCCCCccCCCccc-EEEEECCCCEEEEEEC----
Confidence 36899999977 5788888 3221111 11 1232 11222 22222 689999987
Q ss_pred CccCceEEeeCCCCeeE-----EeC-CCCC------CCcceEEEE--ECCEEEEEcCCCCCCccceEEEEeCCCC
Q psy14726 503 NCLNSCEVYDPECNQWT-----LIE-PMRH------RRSGVSCIA--YHECIYVIGGFNGMSRMCNGEKYNPVTK 563 (712)
Q Consensus 503 ~~~~~v~~yd~~~~~W~-----~~~-~~p~------~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~ 563 (712)
+..|+||..+++-. .+. .+|. +..--++.. .++++|++-| +.-|+||..+.
T Consensus 138 ---~~yw~~d~~~~~~~~gyPk~i~~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg-------~~Ywr~d~~~~ 202 (227)
T 3lp9_A 138 ---DQYARIDYGSNSMVNKEIKSISSGYPCFRNTIFESGADAAFASHKTNEVYFFKD-------DHYARVKVTPX 202 (227)
T ss_dssp ---TEEEEEETTTTEESSSSCEEHHHHCGGGTTSGGGGCCSEEEECSSTTEEEEEET-------TEEEEEECCSS
T ss_pred ---CEEEEEeCCCccccCCCCeEHHHCCCCccccccCCCccEEEEcCCCceEEEEEC-------CEEEEEECCcc
Confidence 56899998765421 111 1221 112223333 3589999987 57889998765
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=84.50 E-value=19 Score=39.14 Aligned_cols=258 Identities=12% Similarity=0.069 Sum_probs=140.5
Q ss_pred CceEEEEECCCCcEEEcccCCCCCCCcceEEEEE----CCEEEEEeecCC------------CCccceEEEEECCCCc--
Q psy14726 362 TDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI----GYNIYVIGGFDG------------NEYYNSCRCFNAVTKV-- 423 (712)
Q Consensus 362 ~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~----~~~lyv~GG~~~------------~~~~~~v~~yd~~~~~-- 423 (712)
.+.|.+.|..+.+-..+- .+|.....|++++. ++++|+.+.+.. +...+.+-..|..+.+
T Consensus 111 ~~rVavIdl~t~~~~~ii--~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~ 188 (595)
T 1fwx_A 111 NTRVARVRCDVMKCDAIL--EIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVA 188 (595)
T ss_dssp TTEEEEEETTTTEEEEEE--ECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEE
T ss_pred CCEEEEEECCCceEeeEE--eCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEE
Confidence 456888999988765532 34544556777763 577877764311 2334578889999876
Q ss_pred EEEe-CCCC-------CCcceeEEEEEC--------------CeEEEEccc-------CC-CCCCceeEEeecCCCceEE
Q psy14726 424 WKEI-APMN-------FKRCYVSTAVHH--------------DVIYAMGGY-------NG-QRRQNSVEKYNYTENQWSL 473 (712)
Q Consensus 424 W~~~-~~~~-------~~r~~~~~~~~~--------------~~iyv~GG~-------~~-~~~~~~v~~yd~~~~~W~~ 473 (712)
|+-. +.-| ..++.+.++.-. +.+.|+--. .+ ....+.|-+.|+.+.+...
T Consensus 189 ~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~ 268 (595)
T 1fwx_A 189 WQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSL 268 (595)
T ss_dssp EEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCS
T ss_pred EEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCce
Confidence 4422 1211 112222221111 112222100 01 1123568889988854444
Q ss_pred -cccCCccccceeEEEE-CC-EEEEEcccCCCCccCceEEeeCCCCe-e---------EEeCCCCC-CCcceEEEEECCE
Q psy14726 474 -IAPMNVERSDASATTL-QG-KIYITGGFNGHNCLNSCEVYDPECNQ-W---------TLIEPMRH-RRSGVSCIAYHEC 539 (712)
Q Consensus 474 -~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~~~-W---------~~~~~~p~-~r~~~~~~~~~~~ 539 (712)
+...|.+..-|++..- +| .+||.++.+ +.|.+||..+.+ + ..+...+. .+-.|.+..-+|.
T Consensus 269 ~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s-----~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~ 343 (595)
T 1fwx_A 269 FTRYIPIANNPHGCNMAPDKKHLCVAGKLS-----PTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGN 343 (595)
T ss_dssp SEEEEEEESSCCCEEECTTSSEEEEECTTS-----SBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSE
T ss_pred eEEEEecCCCceEEEEcCCCCEEEEeCCCC-----CeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCCe
Confidence 4456666677777666 44 577776543 678999988652 1 11222222 2334555545678
Q ss_pred EEEEcCCCCCCccceEEEEeCCC--------CcEEEcCCCCCCcc-ceEEEEE-------CCEEEEEcccCCCce-----
Q psy14726 540 IYVIGGFNGMSRMCNGEKYNPVT--------KTWSQVPDMYNPRS-NFAIEVI-------DDMIFAIGGFNGVTT----- 598 (712)
Q Consensus 540 iyv~GG~~~~~~~~~v~~yd~~~--------~~W~~~~~~p~~r~-~~~~~~~-------~~~i~v~GG~~~~~~----- 598 (712)
+|+.-..+ +.|..||.++ +.+..+..++..-. +|..+.. +..+|+.-+.+...+
T Consensus 344 aY~t~~ld-----sqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp 418 (595)
T 1fwx_A 344 AYTSLFLD-----SQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNVGP 418 (595)
T ss_dssp EEEEETTT-----TEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCCCS
T ss_pred EEEEEecC-----CcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccccccCCC
Confidence 88886543 5677787765 23555544443322 3333322 556777766553322
Q ss_pred --eeeEEEEECCCCeEEEccCCCCcccceEEEEEc
Q psy14726 599 --IYHVECYDEKTDEWYEATDMNIYRSALSACVIM 631 (712)
Q Consensus 599 --~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~ 631 (712)
-..-.+||+..++=..+...|..-..|-++++.
T Consensus 419 ~~~~~~ql~dis~~~m~lv~d~p~~~ePh~~~i~~ 453 (595)
T 1fwx_A 419 LKPENDQLIDISGDKMVLVHDGPTFAEPHDAIAVH 453 (595)
T ss_dssp SCCEEEEEEECSSSSCEEEEEEEESSCCCCEEEEC
T ss_pred CCCCcceEEEcCCCcEEEEEEEcCCCCCCceEEcc
Confidence 123478999888887776666544445555554
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=84.22 E-value=36 Score=34.08 Aligned_cols=182 Identities=6% Similarity=-0.007 Sum_probs=88.7
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA 475 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 475 (712)
++.+.+.||.+ ..+..+|..+++-...-..+. .-.++....+.+++... +.+..||..+.. ..+.
T Consensus 70 ~~~~~~~~~~d-----~~v~iWd~~~~~~~~~~~~~~--~v~~v~~~~~~~~~~~~-------~~i~i~d~~~~~-~~~~ 134 (355)
T 3vu4_A 70 TNYVAFVTGVK-----EVVHIWDDVKKQDVSRIKVDA--PVKDLFLSREFIVVSYG-------DVISVFKFGNPW-KRIT 134 (355)
T ss_dssp SSEEEEECSST-----TEEEEEETTTTEEEEEEECSS--CEEEEEECSSEEEEEET-------TEEEEEESSTTC-CBSS
T ss_pred CCEEEEEECCc-----cEEEEEECCCCcEEEEEECCC--ceEEEEEcCCEEEEEEc-------CEEEEEECCCCc-eeeE
Confidence 45666777643 378999998887543222222 12233333444444321 468888887651 1121
Q ss_pred cCCccccceeEEEE-CCEEEEE-cccCCCCccCceEEeeCCCCe-eEE-------------eCCCCCCCcceEEEEE--C
Q psy14726 476 PMNVERSDASATTL-QGKIYIT-GGFNGHNCLNSCEVYDPECNQ-WTL-------------IEPMRHRRSGVSCIAY--H 537 (712)
Q Consensus 476 ~~p~~r~~~~~~~~-~~~iyv~-GG~~~~~~~~~v~~yd~~~~~-W~~-------------~~~~p~~r~~~~~~~~--~ 537 (712)
.+.. ....+.+ .+.+.+. |+.+ ..+..||..+.. +.. +..+........++.+ +
T Consensus 135 ~~~~---~~~~~~~s~~~la~~sg~~~-----g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~ 206 (355)
T 3vu4_A 135 DDIR---FGGVCEFSNGLLVYSNEFNL-----GQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRK 206 (355)
T ss_dssp CCEE---EEEEEEEETTEEEEEESSCT-----TCEEEEECCC------------------CCEEECCCSSCEEEEEECTT
T ss_pred Eecc---CCceEEEEccEEEEeCCCcC-----cEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCC
Confidence 1111 1112222 3444444 4433 358888887653 110 1111111122223333 6
Q ss_pred CEEEEEcCCCCCCccce-EEEEeCCCCcEEEc-CCCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCC
Q psy14726 538 ECIYVIGGFNGMSRMCN-GEKYNPVTKTWSQV-PDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTD 610 (712)
Q Consensus 538 ~~iyv~GG~~~~~~~~~-v~~yd~~~~~W~~~-~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~ 610 (712)
+.+++.|+.+ .. +..||..+.+-... ..-.....-.+++.. +++.++.|+.++ .+.+||..+.
T Consensus 207 g~~l~s~s~d-----~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~-----~v~iw~~~~~ 272 (355)
T 3vu4_A 207 SDMVATCSQD-----GTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKW-----TLHVFEIFND 272 (355)
T ss_dssp SSEEEEEETT-----CSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTC-----EEEEEESSCC
T ss_pred CCEEEEEeCC-----CCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCC-----EEEEEEccCC
Confidence 7777888764 44 78899887643322 100011111222222 678888888764 6788887654
|
| >1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1 | Back alignment and structure |
|---|
Probab=84.03 E-value=23 Score=33.07 Aligned_cols=135 Identities=15% Similarity=0.247 Sum_probs=73.7
Q ss_pred ECCeEEEEcccCCCCCCceeEEeecCCCce--EEc----ccCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCC
Q psy14726 442 HHDVIYAMGGYNGQRRQNSVEKYNYTENQW--SLI----APMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPEC 515 (712)
Q Consensus 442 ~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W--~~~----~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~ 515 (712)
.+|++|+|=| +.+|+++.....+ ..+ +.+|. ... +|...++++|+|-| +.+|+|+..+
T Consensus 27 ~~g~~yfFkg-------~~~Wr~~~~~~~~~p~~Is~~wpgLP~-~ID-AA~~~~~~~yfFkG-------~~yw~~~~~~ 90 (219)
T 1hxn_A 27 NHGATYVFSG-------SHYWRLDTNRDGWHSWPIAHQWPQGPS-TVD-AAFSWEDKLYLIQD-------TKVYVFLTKG 90 (219)
T ss_dssp TTSCEEEEET-------TEEEESSSSSCTTCCEEGGGTCTTSCS-SCS-EEEEETTEEEEEET-------TEEEEEECSS
T ss_pred CCCcEEEEeC-------CEEEEEcCCCCCCCceEhhhhccCCCC-Ccc-EEEEECCcEEEecC-------CEEEEEeCCC
Confidence 5789999977 4567776543322 112 12332 222 34445899999977 5688888653
Q ss_pred C-ee-----EEeC---CCCCC--Ccce-EEEEE--CCEEEEEcCCCCCCccceEEEEeCCC---CcEEEcCCCCCCccce
Q psy14726 516 N-QW-----TLIE---PMRHR--RSGV-SCIAY--HECIYVIGGFNGMSRMCNGEKYNPVT---KTWSQVPDMYNPRSNF 578 (712)
Q Consensus 516 ~-~W-----~~~~---~~p~~--r~~~-~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~---~~W~~~~~~p~~r~~~ 578 (712)
+ +- +.+. .+|.. .... ++... ++++|++-| +..|+||..+ ..|...+.+|. ...
T Consensus 91 ~~~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG-------~~ywr~d~~~~P~~i~~~~~g~p~-~vd- 161 (219)
T 1hxn_A 91 GYTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAG-------RRLWWLDLKSGAQATWTELPWPHE-KVD- 161 (219)
T ss_dssp SCEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEET-------TEEEEEEGGGGGGCCCEEECCSCS-CCS-
T ss_pred CceecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeC-------CEEEEEeCCCCceEhhhcCCCCCC-CcC-
Confidence 2 10 1111 23322 1112 22222 589999988 5679999654 24444333322 222
Q ss_pred EEEE------------ECCEEEEEcccCCCceeeeEEEEECC
Q psy14726 579 AIEV------------IDDMIFAIGGFNGVTTIYHVECYDEK 608 (712)
Q Consensus 579 ~~~~------------~~~~i~v~GG~~~~~~~~~v~~yd~~ 608 (712)
++.. .++.+|++-|. ..|.||..
T Consensus 162 Aa~~~~~~~~~~~~~~~~~~~YFFkg~-------~y~r~~~~ 196 (219)
T 1hxn_A 162 GALCMEKPLGPNSCSTSGPNLYLIHGP-------NLYCYRHV 196 (219)
T ss_dssp EEEEESSCSSSCCSCSSSCEEEEEETT-------EEEEESSH
T ss_pred EEEEccccccccceeccCCeEEEEECC-------EEEEEeCC
Confidence 3333 35678888663 46777754
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=83.98 E-value=69 Score=37.09 Aligned_cols=188 Identities=10% Similarity=-0.006 Sum_probs=96.7
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA 475 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 475 (712)
++.+++.|+.+ ..+..||..+..-... .+....-.+++...|+..+.|+.+ ..+.+||..+.+-...
T Consensus 28 dg~~lAsgs~D-----g~I~lw~~~~~~~~~~--~~~~~~V~~l~fspg~~L~S~s~D-----~~v~lWd~~~~~~~~~- 94 (902)
T 2oaj_A 28 TQNLLAIATVT-----GEVHIYGQQQVEVVIK--LEDRSAIKEMRFVKGIYLVVINAK-----DTVYVLSLYSQKVLTT- 94 (902)
T ss_dssp TTTEEEEEETT-----SEEEEECSTTCEEEEE--CSSCCCEEEEEEETTTEEEEEETT-----CEEEEEETTTCSEEEE-
T ss_pred CCCEEEEEeCC-----CEEEEEeCCCcEEEEE--cCCCCCEEEEEEcCCCEEEEEECc-----CeEEEEECCCCcEEEE-
Confidence 45566677654 3577777665543222 111122233444446655555533 5788999887654221
Q ss_pred cCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeC--------CCCCC--CcceEEEEEC--CEEE
Q psy14726 476 PMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIE--------PMRHR--RSGVSCIAYH--ECIY 541 (712)
Q Consensus 476 ~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~--------~~p~~--r~~~~~~~~~--~~iy 541 (712)
+... ....++.+ ++..++.|+.++ .+..||..+..-.... ..+.. -.-.+++... +.++
T Consensus 95 -~~~~-~~V~~v~~sp~g~~l~sgs~dg-----~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l 167 (902)
T 2oaj_A 95 -VFVP-GKITSIDTDASLDWMLIGLQNG-----SMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTV 167 (902)
T ss_dssp -EECS-SCEEEEECCTTCSEEEEEETTS-----CEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEE
T ss_pred -EcCC-CCEEEEEECCCCCEEEEEcCCC-----cEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEE
Confidence 1111 11222222 566667776553 5888998887643110 00111 1112333332 3566
Q ss_pred EEcCCCCCCccceEEEEeCCCCcEEEcCCC------CC---------C-ccceEEEEE--CCEEEEEcccCCCceeeeEE
Q psy14726 542 VIGGFNGMSRMCNGEKYNPVTKTWSQVPDM------YN---------P-RSNFAIEVI--DDMIFAIGGFNGVTTIYHVE 603 (712)
Q Consensus 542 v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~------p~---------~-r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~ 603 (712)
++|+.+ ..+ .||..+.+-...-.. +. . ......+.+ ++..++.|+.++ .+.
T Consensus 168 ~~g~~d-----g~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg-----~i~ 236 (902)
T 2oaj_A 168 LISYEY-----VTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDN-----SLV 236 (902)
T ss_dssp EEECSS-----CEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTC-----CEE
T ss_pred EEEeCC-----CcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCC-----eEE
Confidence 677643 457 899887754322110 00 0 011222333 678888888765 678
Q ss_pred EEECCCCeEEE
Q psy14726 604 CYDEKTDEWYE 614 (712)
Q Consensus 604 ~yd~~~~~W~~ 614 (712)
+||..+++-..
T Consensus 237 lWd~~~g~~~~ 247 (902)
T 2oaj_A 237 FWDANSGHMIM 247 (902)
T ss_dssp EEETTTCCEEE
T ss_pred EEECCCCcEEE
Confidence 89998876543
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=83.61 E-value=46 Score=35.71 Aligned_cols=172 Identities=8% Similarity=0.047 Sum_probs=83.6
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 474 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 474 (712)
++..++.|+.+ ..+..||.....-..+..... . -.+++. .+++.++.|+.+ ..+..||.....-..+
T Consensus 396 dg~~l~~~~~d-----~~v~~~~~~~~~~~~~~~~~~-~-v~~~~~s~d~~~l~~~~~d-----~~v~~w~~~~~~~~~~ 463 (577)
T 2ymu_A 396 DGQTIASASDD-----KTVKLWNRNGQLLQTLTGHSS-S-VWGVAFSPDDQTIASASDD-----KTVKLWNRNGQLLQTL 463 (577)
T ss_dssp TSSCEEEEETT-----SEEEEECTTCCEEEEEECCSS-C-EEEEEECTTSSEEEEEETT-----SEEEEEETTSCEEEEE
T ss_pred CCCEEEEEeCC-----CEEEEEeCCCCEEEEecCCCC-C-eEEEEECCCCCEEEEEcCC-----CEEEEEECCCCEEEEE
Confidence 56666777643 357778854433333322111 1 112222 356777777643 4578888655443333
Q ss_pred ccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCcc
Q psy14726 475 APMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRM 552 (712)
Q Consensus 475 ~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~ 552 (712)
..- .....++.+ ++++++.|+.++ .+..||.....-..+..... .....+..-++++++.||.+
T Consensus 464 ~~~---~~~v~~~~~spd~~~las~~~d~-----~i~iw~~~~~~~~~~~~h~~-~v~~l~~s~dg~~l~s~~~d----- 529 (577)
T 2ymu_A 464 TGH---SSSVRGVAFSPDGQTIASASDDK-----TVKLWNRNGQLLQTLTGHSS-SVRGVAFSPDGQTIASASDD----- 529 (577)
T ss_dssp ECC---SSCEEEEEECTTSCEEEEEETTS-----EEEEEETTSCEEEEEECCSS-CEEEEEECTTSSCEEEEETT-----
T ss_pred cCC---CCCEEEEEEcCCCCEEEEEeCCC-----EEEEEcCCCCEEEEEeCCCC-CEEEEEEcCCCCEEEEEECc-----
Confidence 221 111222223 678888877653 57778864433222221111 11111122256777777754
Q ss_pred ceEEEEeCCCCcEEEcCCCCCCccceEEEEE-CCEEEEEcccCC
Q psy14726 553 CNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNG 595 (712)
Q Consensus 553 ~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~ 595 (712)
..+..||.....-..+..... .-.+++.. +++.++.||.++
T Consensus 530 g~v~lwd~~~~~~~~~~~h~~--~v~~~~fs~dg~~l~s~~~D~ 571 (577)
T 2ymu_A 530 KTVKLWNRNGQLLQTLTGHSS--SVWGVAFSPDGQTIASASSDK 571 (577)
T ss_dssp SEEEEECTTSCEEEEEECCSS--CEEEEEECTTSSCEEEEETTS
T ss_pred CEEEEEeCCCCEEEEEcCCCC--CEEEEEEcCCCCEEEEEeCCC
Confidence 467788865443333322111 11122222 677777788765
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=83.10 E-value=18 Score=40.44 Aligned_cols=151 Identities=7% Similarity=-0.088 Sum_probs=75.6
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcc------
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRC------ 435 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~------ 435 (712)
..++.+|..+++...+........+.. ..+.. +++.++++.. ..++.+|..+++...+........
T Consensus 91 ~~i~~~d~~~~~~~~l~~~~~~~~~~~-~~~~SPdG~~la~~~~------~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~ 163 (723)
T 1xfd_A 91 GYYVLSKIPHGDPQSLDPPEVSNAKLQ-YAGWGPKGQQLIFIFE------NNIYYCAHVGKQAIRVVSTGKEGVIYNGLS 163 (723)
T ss_dssp SEEEEEESSSCCCEECCCTTCCSCCCS-BCCBCSSTTCEEEEET------TEEEEESSSSSCCEEEECCCBTTTEEEEEC
T ss_pred eeEEEEECCCCceEeccCCcccccccc-ccEECCCCCEEEEEEC------CeEEEEECCCCceEEEecCCCCCceECccc
Confidence 678899988877655432211111111 11111 4544455442 368888888877665543321110
Q ss_pred -----------eeEEE-EECCeEEEEcccCCC-----------------------------CCCceeEEeecCCCce-EE
Q psy14726 436 -----------YVSTA-VHHDVIYAMGGYNGQ-----------------------------RRQNSVEKYNYTENQW-SL 473 (712)
Q Consensus 436 -----------~~~~~-~~~~~iyv~GG~~~~-----------------------------~~~~~v~~yd~~~~~W-~~ 473 (712)
..+.+ .-+|+.++++..++. ....+++++|..+.+- ..
T Consensus 164 ~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~ 243 (723)
T 1xfd_A 164 DWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLE 243 (723)
T ss_dssp CHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEE
T ss_pred ceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEE
Confidence 01222 235665555443211 1123788899888763 44
Q ss_pred cccCCcc---ccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEe
Q psy14726 474 IAPMNVE---RSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLI 521 (712)
Q Consensus 474 ~~~~p~~---r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 521 (712)
+...... ......+.+ +|++++.....+ .....++.+|..+++...+
T Consensus 244 l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~-~~~~~i~~~d~~~g~~~~~ 295 (723)
T 1xfd_A 244 MMPPDDPRMREYYITMVKWATSTKVAVTWLNRA-QNVSILTLCDATTGVCTKK 295 (723)
T ss_dssp CCCCCCGGGSSEEEEEEEESSSSEEEEEEEETT-SCEEEEEEEETTTCCEEEE
T ss_pred eeCCccCCCccceeEEEEEeCCCeEEEEEEcCC-CCeEEEEEEeCCCCcceEE
Confidence 4321111 111122223 777665553322 2235788999988876554
|
| >1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1 | Back alignment and structure |
|---|
Probab=80.96 E-value=23 Score=33.15 Aligned_cols=134 Identities=15% Similarity=0.144 Sum_probs=72.7
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcE--EEe----CCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCC
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVW--KEI----APMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTEN 469 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W--~~~----~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~ 469 (712)
++.+|+|=| +.+|+++.....+ ..+ +.+|. .-. ++...++++|+|-| +.+|+|+..++
T Consensus 28 ~g~~yfFkg-------~~~Wr~~~~~~~~~p~~Is~~wpgLP~-~ID-AA~~~~~~~yfFkG-------~~yw~~~~~~~ 91 (219)
T 1hxn_A 28 HGATYVFSG-------SHYWRLDTNRDGWHSWPIAHQWPQGPS-TVD-AAFSWEDKLYLIQD-------TKVYVFLTKGG 91 (219)
T ss_dssp TSCEEEEET-------TEEEESSSSSCTTCCEEGGGTCTTSCS-SCS-EEEEETTEEEEEET-------TEEEEEECSSS
T ss_pred CCcEEEEeC-------CEEEEEcCCCCCCCceEhhhhccCCCC-Ccc-EEEEECCcEEEecC-------CEEEEEeCCCC
Confidence 788999977 3466766543221 111 12332 122 33345899999977 57899986532
Q ss_pred -ce-----EEcc---cCCcc--ccceeEEE-E--CCEEEEEcccCCCCccCceEEeeCCC---CeeEEeCCCCCCCcceE
Q psy14726 470 -QW-----SLIA---PMNVE--RSDASATT-L--QGKIYITGGFNGHNCLNSCEVYDPEC---NQWTLIEPMRHRRSGVS 532 (712)
Q Consensus 470 -~W-----~~~~---~~p~~--r~~~~~~~-~--~~~iyv~GG~~~~~~~~~v~~yd~~~---~~W~~~~~~p~~r~~~~ 532 (712)
+= ..+. .+|.. ...--+|. . ++++|++-| +..++||..+ ..|...+.+|. ... +
T Consensus 92 ~~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG-------~~ywr~d~~~~P~~i~~~~~g~p~-~vd-A 162 (219)
T 1hxn_A 92 YTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAG-------RRLWWLDLKSGAQATWTELPWPHE-KVD-G 162 (219)
T ss_dssp CEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEET-------TEEEEEEGGGGGGCCCEEECCSCS-CCS-E
T ss_pred ceecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeC-------CEEEEEeCCCCceEhhhcCCCCCC-CcC-E
Confidence 11 1111 13322 11223333 2 589999988 4578888653 23544333222 222 3
Q ss_pred EEE------------ECCEEEEEcCCCCCCccceEEEEeCC
Q psy14726 533 CIA------------YHECIYVIGGFNGMSRMCNGEKYNPV 561 (712)
Q Consensus 533 ~~~------------~~~~iyv~GG~~~~~~~~~v~~yd~~ 561 (712)
+.. .++.+|.+-| +.-++||..
T Consensus 163 a~~~~~~~~~~~~~~~~~~~YFFkg-------~~y~r~~~~ 196 (219)
T 1hxn_A 163 ALCMEKPLGPNSCSTSGPNLYLIHG-------PNLYCYRHV 196 (219)
T ss_dssp EEEESSCSSSCCSCSSSCEEEEEET-------TEEEEESSH
T ss_pred EEEccccccccceeccCCeEEEEEC-------CEEEEEeCC
Confidence 333 3467999987 466777764
|
| >2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus} | Back alignment and structure |
|---|
Probab=80.68 E-value=1.3 Score=38.18 Aligned_cols=37 Identities=16% Similarity=0.086 Sum_probs=29.6
Q ss_pred cCChhhHHHHHHHHHHcccHHHHHHHHHHHHHHHHHh
Q psy14726 191 LTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDV 227 (712)
Q Consensus 191 ~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~l 227 (712)
.++.+|+..++.+|+.++++.|.+.|.+|+.+++...
T Consensus 86 ~i~~~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l~~~ 122 (135)
T 2yy9_A 86 ALTSGNRDQVLLAAKELRVPEAVELCQSFQPQTSVGQ 122 (135)
T ss_dssp CCCTTTHHHHHHHHHHTTCHHHHHHHHHCCC------
T ss_pred CCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccCC
Confidence 5788999999999999999999999999999887653
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=80.31 E-value=16 Score=40.90 Aligned_cols=196 Identities=8% Similarity=-0.124 Sum_probs=96.8
Q ss_pred eEEEEECCCCcEEEeCCCCCC---cceeEEEEECCeEEEEcccCCC----CCCceeEEeecCCCceEEcccCCccc--cc
Q psy14726 413 SCRCFNAVTKVWKEIAPMNFK---RCYVSTAVHHDVIYAMGGYNGQ----RRQNSVEKYNYTENQWSLIAPMNVER--SD 483 (712)
Q Consensus 413 ~v~~yd~~~~~W~~~~~~~~~---r~~~~~~~~~~~iyv~GG~~~~----~~~~~v~~yd~~~~~W~~~~~~p~~r--~~ 483 (712)
.++.+|..+++-..+...... ........-+|+.++++..... .....++.+|..+.+-..+....... ..
T Consensus 38 ~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~ 117 (723)
T 1xfd_A 38 TVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQ 117 (723)
T ss_dssp CEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCS
T ss_pred CEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCcccccccc
Confidence 578888887765444322211 1122223346776666543322 12478999999988765554432111 11
Q ss_pred eeEEEECCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCC-C-----------------cceEEEEECCEEEEEcC
Q psy14726 484 ASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHR-R-----------------SGVSCIAYHECIYVIGG 545 (712)
Q Consensus 484 ~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~-r-----------------~~~~~~~~~~~iyv~GG 545 (712)
..+..-+|+..+++.. .+++.+|..+++...+...... . .......-+++.++++.
T Consensus 118 ~~~~SPdG~~la~~~~------~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~ 191 (723)
T 1xfd_A 118 YAGWGPKGQQLIFIFE------NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAA 191 (723)
T ss_dssp BCCBCSSTTCEEEEET------TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEE
T ss_pred ccEECCCCCEEEEEEC------CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEE
Confidence 1222225554444432 3688888877766555432111 1 01111222454444433
Q ss_pred CCCC-----------------------------CccceEEEEeCCCCc-EEEcCCCCCC---ccceEEEEE--CCEEEEE
Q psy14726 546 FNGM-----------------------------SRMCNGEKYNPVTKT-WSQVPDMYNP---RSNFAIEVI--DDMIFAI 590 (712)
Q Consensus 546 ~~~~-----------------------------~~~~~v~~yd~~~~~-W~~~~~~p~~---r~~~~~~~~--~~~i~v~ 590 (712)
.++. .....++.+|..+.+ ...+...... ......+.+ +++++++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~ 271 (723)
T 1xfd_A 192 INDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVT 271 (723)
T ss_dssp EECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEE
T ss_pred ECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEE
Confidence 2110 112378899988776 3444322111 111222223 7776655
Q ss_pred cccCCCceeeeEEEEECCCCeEEEc
Q psy14726 591 GGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 591 GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
....+ .....++++|+.+++...+
T Consensus 272 ~~~~~-~~~~~i~~~d~~~g~~~~~ 295 (723)
T 1xfd_A 272 WLNRA-QNVSILTLCDATTGVCTKK 295 (723)
T ss_dssp EEETT-SCEEEEEEEETTTCCEEEE
T ss_pred EEcCC-CCeEEEEEEeCCCCcceEE
Confidence 54332 2235789999988776543
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=80.29 E-value=66 Score=36.33 Aligned_cols=199 Identities=8% Similarity=-0.052 Sum_probs=97.9
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCC-cEEEeCCCCCCcceeEEE-EECC-eEEEEcccCCCCCCceeEEeecCCCce-
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTK-VWKEIAPMNFKRCYVSTA-VHHD-VIYAMGGYNGQRRQNSVEKYNYTENQW- 471 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~-~W~~~~~~~~~r~~~~~~-~~~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W- 471 (712)
+++.++++-..++.....++.+|..++ +. ++. .......+.+ .-+| .|+.. -.........+++.+..+..-
T Consensus 185 DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~--l~~-~~~~~~~~~~WspDg~~l~y~-~~d~~~~~~~v~~~~lgt~~~~ 260 (751)
T 2xe4_A 185 EHDLVAFSVDMSGNEVYTIEFKRISDPSQT--IAD-KVSGTNGEIVWGPDHTSLFYV-TKDETLRENKVWRHVMGKLQSE 260 (751)
T ss_dssp TTCEEEEEEESSSSSCEEEEEEETTCTTCC--CCC-CEEEECSCCEECSSTTEEEEE-EECTTCCEEEEEEEETTSCGGG
T ss_pred CCCEEEEEEeCCCCceEEEEEEECCCCCEe--CCc-cccCceeeEEEecCCCEEEEE-EECCCCCCCEEEEEECCCCchh
Confidence 455555544333333456999999987 62 111 0011111122 2244 34333 222222234788888776531
Q ss_pred -EEcccCCccccceeEEEE--CCE-EEEEcccCCCCccCceEEeeCCCC--ee--EEeCCCCCCCcceEEE-EECCEEEE
Q psy14726 472 -SLIAPMNVERSDASATTL--QGK-IYITGGFNGHNCLNSCEVYDPECN--QW--TLIEPMRHRRSGVSCI-AYHECIYV 542 (712)
Q Consensus 472 -~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~v~~yd~~~~--~W--~~~~~~p~~r~~~~~~-~~~~~iyv 542 (712)
..+-.-+..... ....+ +|+ |++..... ..+.++.+|..+. .+ +.+.+-... ..+... ..++.||+
T Consensus 261 ~~lv~~~~~~~~~-~~~~~SpDg~~l~~~~~~~---~~~~l~~~d~~~~~~~~~~~~l~~~~~~-~~~s~~~~~g~~l~~ 335 (751)
T 2xe4_A 261 DVCLYEEHNPLFS-AFMYKAADTNTLCIGSQSP---ETAEVHLLDLRKGNAHNTLEIVRPREKG-VRYDVQMHGTSHLVI 335 (751)
T ss_dssp CEEEEECCCTTCE-EEEEECTTSSEEEEEEECS---SCEEEEEEESSSCTTCCCEEESSCCCTT-CCEEEEEETTTEEEE
T ss_pred cEEEEecCCCceE-EEEEECCCCCEEEEEecCC---CCceEEEEECCCCCCCceeEEeecCCCC-ceEEEeeeeCCEEEE
Confidence 112111212222 22222 454 44443322 2467899998875 56 655432211 112222 23788888
Q ss_pred EcCCCCCCccceEEEEeCCC-CcEEE-cCCCCCCccceEEEEECCEEEEEcccCCCceeeeEEEEEC
Q psy14726 543 IGGFNGMSRMCNGEKYNPVT-KTWSQ-VPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDE 607 (712)
Q Consensus 543 ~GG~~~~~~~~~v~~yd~~~-~~W~~-~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~ 607 (712)
..-.+ ......++.+|..+ ..|+. +-.........+....++.|++..-.++ ...++++|+
T Consensus 336 ~t~~~-~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g---~~~l~~~dl 398 (751)
T 2xe4_A 336 LTNEG-GAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAG---LTRIWTMMA 398 (751)
T ss_dssp EECTT-TCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETT---EEEEEEEEC
T ss_pred EeCCC-CCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCC---EEEEEEEec
Confidence 86543 12245889999876 67876 4222112222334445788887765544 346888886
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 712 | ||||
| d1zgka1 | 288 | b.68.11.1 (A:322-609) Kelch-like ECH-associated pr | 9e-42 | |
| d1zgka1 | 288 | b.68.11.1 (A:322-609) Kelch-like ECH-associated pr | 9e-20 | |
| d1k3ia3 | 387 | b.69.1.1 (A:151-537) Galactose oxidase, central do | 7e-24 | |
| d1k3ia3 | 387 | b.69.1.1 (A:151-537) Galactose oxidase, central do | 4e-17 | |
| d1k3ia3 | 387 | b.69.1.1 (A:151-537) Galactose oxidase, central do | 6e-16 | |
| d1k3ia3 | 387 | b.69.1.1 (A:151-537) Galactose oxidase, central do | 9e-16 | |
| d1r29a_ | 122 | d.42.1.1 (A:) B-cell lymphoma 6 (Bcl6) protein BTB | 1e-21 | |
| d1buoa_ | 121 | d.42.1.1 (A:) Promyelocytic leukaemia zinc finger | 2e-20 |
| >d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Kelch motif family: Kelch motif domain: Kelch-like ECH-associated protein 1, KEAP1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 151 bits (381), Expect = 9e-42
Identities = 101/292 (34%), Positives = 149/292 (51%), Gaps = 10/292 (3%)
Query: 343 PRVPHEILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPM-GPRAYHGTAVIGYNIYV 401
P+V +++ GG+ S ++E Y+ W ++ + PR+ V+G +Y
Sbjct: 1 PKVG-RLIYTAGGYFRQS-LSYLEAYNPSNGTW---LRLADLQVPRSGLAGCVVGGLLYA 55
Query: 402 IGGFD----GNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRR 457
+GG + GN ++ C+N +T W APM+ R + V IYA+GG +G
Sbjct: 56 VGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIH 115
Query: 458 QNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQ 517
NSVE+Y ++W L+APM R L +Y GGF+G N LNS E Y PE N+
Sbjct: 116 HNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNE 175
Query: 518 WTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSN 577
W +I M RSG H CIY GG++G ++ + E+Y+ T+TW+ V M + RS
Sbjct: 176 WRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSA 235
Query: 578 FAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACV 629
I V I+ +GG++G T + VECYD TD W E T M RS + V
Sbjct: 236 LGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTRMTSGRSGVGVAV 287
|
| >d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Kelch motif family: Kelch motif domain: Kelch-like ECH-associated protein 1, KEAP1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 88.0 bits (216), Expect = 9e-20
Identities = 58/204 (28%), Positives = 91/204 (44%), Gaps = 5/204 (2%)
Query: 444 DVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFN--- 500
+IY GGY Q + +E YN + W +A + V RS + + G +Y GG N
Sbjct: 5 RLIYTAGGYFRQS-LSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSP 63
Query: 501 -GHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYN 559
G+ ++ + Y+P NQW+ PM R+ + IY +GG +G + E+Y
Sbjct: 64 DGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYE 123
Query: 560 PVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMN 619
P W V M R + V++ +++A+GGF+G + ECY + +EW T MN
Sbjct: 124 PERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMN 183
Query: 620 IYRSALSACVIMGLPNVYDYIHQH 643
RS CV+
Sbjct: 184 TIRSGAGVCVLHNCIYAAGGYDGQ 207
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} Length = 387 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Score = 102 bits (253), Expect = 7e-24
Identities = 49/351 (13%), Positives = 91/351 (25%), Gaps = 54/351 (15%)
Query: 337 TPEIARPRVPHEI--------LFAIGGWS------GGSPTDFVETYDTRADRWVKIEQVD 382
P I P VP + + ++D
Sbjct: 12 GPTIDLPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTV 71
Query: 383 PMGPRAYHGTAVIGY-NIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV 441
G ++ G I V GG D + +++ + W M R Y S+A
Sbjct: 72 TKHDMFCPGISMDGNGQIVVTGGNDAKK----TSLYDSSSDSWIPGPDMQVARGYQSSAT 127
Query: 442 HH--DVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQG----KIYI 495
V G ++G + + E Y+ + W+ + V + ++
Sbjct: 128 MSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWL 187
Query: 496 TGGFNGH-----NCLNSCEVYDPECNQWTLIEPMRHRRS-----------------GVSC 533
G G Y + R G
Sbjct: 188 FGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKIL 247
Query: 534 IAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSN-FAIEVIDDMIFAIGG 592
Y + + + T +Y R+ ++ + D F GG
Sbjct: 248 TFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGG 307
Query: 593 ------FNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACVIMGLPNVY 637
F T ++ E Y + D +Y+ +I R S +++ V+
Sbjct: 308 QRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVF 358
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} Length = 387 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Score = 81.8 bits (200), Expect = 4e-17
Identities = 27/236 (11%), Positives = 57/236 (24%), Gaps = 34/236 (14%)
Query: 419 AVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQN------SVEKYNYTENQWS 472
W + + + Y ++ + S
Sbjct: 6 PGLGRWGPTIDLPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVS 65
Query: 473 LIAPMNVERSD---ASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLI--EPMRHR 527
+ + G+I +TGG + +YD + W +
Sbjct: 66 DRTVTVTKHDMFCPGISMDGNGQIVVTGGNDA----KKTSLYDSSSDSWIPGPDMQVARG 121
Query: 528 RSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSN---------- 577
+ ++ + G ++G NGE Y+P +KTW+ +P+
Sbjct: 122 YQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRS 181
Query: 578 ----FAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACV 629
+ +F G Y + + A R +
Sbjct: 182 DNHAWLFGWKKGSVFQAGPSTA-----MNWYYTSGSGDVKSAGKRQSNRGVAPDAM 232
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} Length = 387 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Score = 78.3 bits (191), Expect = 6e-16
Identities = 28/242 (11%), Positives = 59/242 (24%), Gaps = 36/242 (14%)
Query: 355 GWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYY--- 411
WSGG E Y + W + + + +
Sbjct: 139 SWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQA 198
Query: 412 ----NSCRCFNAVTKVWKEIAPMNFKRCYVS-----------------TAVHHDVIYAMG 450
+ + + K R Y
Sbjct: 199 GPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDS 258
Query: 451 GYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATT-LQGKIYITGG------FNGHN 503
++ + + N + R+ ++ G +ITGG F
Sbjct: 259 DATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDST 318
Query: 504 CLNSCEVYDPECNQWTLIEPMRHRRSG--VSCIAYHECIYVIGGF---NGMSRMCNGEKY 558
+ + E+Y PE + + P R +S + ++ GG + + + + +
Sbjct: 319 PVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGGLCGDCTTNHFDAQIF 378
Query: 559 NP 560
P
Sbjct: 379 TP 380
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} Length = 387 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Score = 77.5 bits (189), Expect = 9e-16
Identities = 19/188 (10%), Positives = 51/188 (27%), Gaps = 9/188 (4%)
Query: 469 NQWSLIAPMNVERSDASATTLQGKIYITGGF------NGHNCLNSCEVYDPECNQWTLIE 522
+W + + + A+ G++ + + + +DP +
Sbjct: 9 GRWGPTIDLPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRT 68
Query: 523 PMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNF--AI 580
+ + I G Y+ + +W PDM R A
Sbjct: 69 VTVTKHDMFCPGISMDGNGQIVVTGGNDAKKT-SLYDSSSDSWIPGPDMQVARGYQSSAT 127
Query: 581 EVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACVIMGLPNVYDYI 640
+ G ++G + E Y + W + + + + + + ++
Sbjct: 128 MSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWL 187
Query: 641 HQHRDSLM 648
+ +
Sbjct: 188 FGWKKGSV 195
|
| >d1r29a_ d.42.1.1 (A:) B-cell lymphoma 6 (Bcl6) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]} Length = 122 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: POZ domain superfamily: POZ domain family: BTB/POZ domain domain: B-cell lymphoma 6 (Bcl6) protein BTB domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 88.6 bits (219), Expect = 1e-21
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 2/114 (1%)
Query: 76 SVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSL 135
+ + LN R +++L D IV F H+ +L ACS F ++FT L
Sbjct: 9 ASDVLLNLNRLRSRDILTDVVIV-VSREQFRAHKTVLMACSGLFYSIFTDQLKRNLSVI- 66
Query: 136 VEIPGVDASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIK 189
P ++ L+++ Y +L++ E N+ +++ + M D C FIK
Sbjct: 67 NLDPEINPEGFNILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIK 120
|
| >d1buoa_ d.42.1.1 (A:) Promyelocytic leukaemia zinc finger (PLZF) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]} Length = 121 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: POZ domain superfamily: POZ domain family: BTB/POZ domain domain: Promyelocytic leukaemia zinc finger (PLZF) protein BTB domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 85.5 bits (211), Expect = 2e-20
Identities = 22/116 (18%), Positives = 41/116 (35%), Gaps = 7/116 (6%)
Query: 76 SVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSL 135
+ N+ R LCD I+ D+ F HR +L S F
Sbjct: 12 PTGLLCKANQMRLAGTLCDVVIM-VDSQEFHAHRTVLACTSKMFEI------LFHRNSQH 64
Query: 136 VEIPGVDASVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRL 191
+ + ++EYAY L +++ LL A + + ++ C ++ +
Sbjct: 65 YTLDFLSPKTFQQILEYAYTATLQAKAEDLDDLLYAAEILEIEYLEEQCLKMLETI 120
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 712 | |||
| d1zgka1 | 288 | Kelch-like ECH-associated protein 1, KEAP1 {Human | 100.0 | |
| d1zgka1 | 288 | Kelch-like ECH-associated protein 1, KEAP1 {Human | 100.0 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 99.97 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 99.96 | |
| d1r29a_ | 122 | B-cell lymphoma 6 (Bcl6) protein BTB domain {Human | 99.92 | |
| d1buoa_ | 121 | Promyelocytic leukaemia zinc finger (PLZF) protein | 99.91 | |
| d1hv2a_ | 99 | Elongin C {Baker's yeast (Saccharomyces cerevisiae | 98.13 | |
| d2c9wc1 | 96 | Elongin C {Human (Homo sapiens) [TaxId: 9606]} | 98.1 | |
| d3kvta_ | 103 | akv3.1 voltage-gated potassium channel {California | 97.03 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 96.95 | |
| d1nn7a_ | 105 | Potassium channel kv4.2 {Rat (Rattus norvegicus) [ | 96.67 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 96.67 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 96.62 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 96.62 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 96.57 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 96.44 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 96.29 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 96.16 | |
| d1t1da_ | 100 | Shaker potassium channel {California sea hare (Apl | 96.12 | |
| d1pexa_ | 192 | Collagenase-3 (MMP-13), C-terminal domain {Human ( | 96.08 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 96.08 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 96.04 | |
| d1fs1b2 | 61 | Cyclin A/CDK2-associated p45, Skp1 {Human (Homo sa | 96.03 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 95.82 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 95.78 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 95.76 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 95.7 | |
| d1su3a2 | 195 | Collagenase (MMP1), C-terminal domain {Human (Homo | 95.69 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 95.68 | |
| d1nexa2 | 72 | Centromere DNA-binding protein complex Cbf3 subuni | 95.68 | |
| d1pexa_ | 192 | Collagenase-3 (MMP-13), C-terminal domain {Human ( | 95.64 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 95.61 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 95.53 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 95.45 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 95.38 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 95.35 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 95.16 | |
| d1itva_ | 195 | Gelatinase B (MMP-9) {Human (Homo sapiens) [TaxId: | 95.05 | |
| d1su3a2 | 195 | Collagenase (MMP1), C-terminal domain {Human (Homo | 94.96 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 94.94 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 94.9 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 94.89 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 94.59 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 94.59 | |
| d1itva_ | 195 | Gelatinase B (MMP-9) {Human (Homo sapiens) [TaxId: | 94.04 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 94.03 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 94.02 | |
| d1fs1b1 | 55 | Cyclin A/CDK2-associated p45, Skp1 {Human (Homo sa | 93.99 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 93.97 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 93.5 | |
| d1kb0a2 | 573 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 93.07 | |
| d1qhua1 | 192 | Hemopexin {Rabbit (Oryctolagus cuniculus) [TaxId: | 92.98 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 92.64 | |
| d1gena_ | 200 | Gelatinase A (MMP-2), C-terminal domain {Human (Ho | 92.62 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 92.15 | |
| d1nexa1 | 70 | Centromere DNA-binding protein complex Cbf3 subuni | 92.14 | |
| d2ad6a1 | 571 | Methanol dehydrogenase, heavy chain {Methylophilus | 92.06 | |
| d1qhua1 | 192 | Hemopexin {Rabbit (Oryctolagus cuniculus) [TaxId: | 91.89 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 91.45 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 91.21 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 91.18 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 91.14 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 90.87 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 90.58 | |
| d1gena_ | 200 | Gelatinase A (MMP-2), C-terminal domain {Human (Ho | 90.58 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 88.43 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 86.79 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 86.54 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 85.98 | |
| d1kb0a2 | 573 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 85.35 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 84.97 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 84.61 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 84.16 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 81.75 |
| >d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Kelch motif family: Kelch motif domain: Kelch-like ECH-associated protein 1, KEAP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-43 Score=361.44 Aligned_cols=279 Identities=35% Similarity=0.699 Sum_probs=261.7
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEECCEEEEEeecC----CCCccceEEEEECCCCc
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFD----GNEYYNSCRCFNAVTKV 423 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~----~~~~~~~v~~yd~~~~~ 423 (712)
+.||++||... ..++.+++||+.+++|..+ +++|.+|.+|++++++++|||+||.. +....+++++||+.+++
T Consensus 5 ~~iyv~GG~~~-~~~~~~~~yd~~t~~W~~~--~~~p~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~ 81 (288)
T d1zgka1 5 RLIYTAGGYFR-QSLSYLEAYNPSNGTWLRL--ADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ 81 (288)
T ss_dssp CCEEEECCBSS-SBCCCEEEEETTTTEEEEC--CCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred CEEEEECCcCC-CCCceEEEEECCCCeEEEC--CCCCCccceeEEEEECCEEEEEeCcccCCCCccccchhhhccccccc
Confidence 47999999864 5778899999999999994 57888999999999999999999963 23457889999999999
Q ss_pred EEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEECCEEEEEcccCCCC
Q psy14726 424 WKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHN 503 (712)
Q Consensus 424 W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~ 503 (712)
|..++++|.+|..|+++++++++|++||..+....+++++||+.+++|...+.++.+|.+|+++.+++++|++||.+...
T Consensus 82 w~~~~~~p~~r~~~~~~~~~~~i~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~GG~~~~~ 161 (288)
T d1zgka1 82 WSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTN 161 (288)
T ss_dssp EEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSC
T ss_pred ccccccccceecceeccccceeeEEecceecccccceeeeeccccCccccccccccccccceeeeeeecceEecCccccc
Confidence 99999999999999999999999999999888888999999999999999999999999999999999999999998877
Q ss_pred ccCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE
Q psy14726 504 CLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI 583 (712)
Q Consensus 504 ~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 583 (712)
...+++.||+.+++|...+..+.++..++++..+++||++||.+......+.+.||+.+++|+.++++|.+|.+|+++.+
T Consensus 162 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~ 241 (288)
T d1zgka1 162 RLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVH 241 (288)
T ss_dssp BCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE
T ss_pred ccceEEEeeccccccccccccccccccccccceeeeEEEecCccccccccceeeeeecceeeecccCccCcccceEEEEE
Confidence 88999999999999999999999999999999999999999998888889999999999999999999999999999999
Q ss_pred CCEEEEEcccCCCceeeeEEEEECCCCeEEEccCCCCcccceEEEE
Q psy14726 584 DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACV 629 (712)
Q Consensus 584 ~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~ 629 (712)
+++|||+||.++...++++++||+++++|+.+++||.+|++|++++
T Consensus 242 ~~~l~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~R~~~~~~~ 287 (288)
T d1zgka1 242 QGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTRMTSGRSGVGVAV 287 (288)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE
T ss_pred CCEEEEEecCCCCeecceEEEEECCCCEEEECCCCCCCcEeEEEEE
Confidence 9999999999988888999999999999999999999999998876
|
| >d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Kelch motif family: Kelch motif domain: Kelch-like ECH-associated protein 1, KEAP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-39 Score=330.57 Aligned_cols=280 Identities=31% Similarity=0.526 Sum_probs=253.9
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCC----CCCCceeEEeecCCCce
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNG----QRRQNSVEKYNYTENQW 471 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~----~~~~~~v~~yd~~~~~W 471 (712)
++.|||+||... ...+++++||+.+++|+.++++|.+|.+|++++++++|||+||... ...++++++||+.+++|
T Consensus 4 g~~iyv~GG~~~-~~~~~~~~yd~~t~~W~~~~~~p~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~w 82 (288)
T d1zgka1 4 GRLIYTAGGYFR-QSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQW 82 (288)
T ss_dssp CCCEEEECCBSS-SBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEE
T ss_pred CCEEEEECCcCC-CCCceEEEEECCCCeEEECCCCCCccceeEEEEECCEEEEEeCcccCCCCccccchhhhcccccccc
Confidence 678999999864 4678999999999999999999999999999999999999999752 23578999999999999
Q ss_pred EEcccCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCc
Q psy14726 472 SLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSR 551 (712)
Q Consensus 472 ~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~ 551 (712)
+.++++|.+|.+|+++++++++|++||..+...++.++.||+.++.|...+.++.+|.+|+++.+++.+|++||.+....
T Consensus 83 ~~~~~~p~~r~~~~~~~~~~~i~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~GG~~~~~~ 162 (288)
T d1zgka1 83 SPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNR 162 (288)
T ss_dssp EECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCB
T ss_pred cccccccceecceeccccceeeEEecceecccccceeeeeccccCccccccccccccccceeeeeeecceEecCcccccc
Confidence 99999999999999999999999999998888889999999999999999999999999999999999999999887777
Q ss_pred cceEEEEeCCCCcEEEcCCCCCCccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeEEEccCCCCcccceEEEEEc
Q psy14726 552 MCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACVIM 631 (712)
Q Consensus 552 ~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~ 631 (712)
..+++.||+.+++|...+..+.++..++++..+++|+++||.+.....++.+.||+.+++|..++++|.+|..|++++++
T Consensus 163 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~ 242 (288)
T d1zgka1 163 LNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVHQ 242 (288)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEET
T ss_pred cceEEEeeccccccccccccccccccccccceeeeEEEecCccccccccceeeeeecceeeecccCccCcccceEEEEEC
Confidence 88999999999999999999999999999999999999999998888889999999999999999999999999999999
Q ss_pred CcceeEeccccccchhhHHhhhhhhcccccccccccccCCcccccccCccCCCCcccccccc
Q psy14726 632 GLPNVYDYIHQHRDSLMEEKRQKLLAIEGRQRQNQSEEGNSSQQSVLPSSNSNVSSSDGVMN 693 (712)
Q Consensus 632 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~w~~~p~~~~~~~~~~~~~~ 693 (712)
+++|++++..... ..-.++ .||+..++|+.++ .|+.+|+++++|.
T Consensus 243 ~~l~v~GG~~~~~---------~~~~v~-------~yd~~~~~W~~~~-~~p~~R~~~~~~~ 287 (288)
T d1zgka1 243 GRIYVLGGYDGHT---------FLDSVE-------CYDPDTDTWSEVT-RMTSGRSGVGVAV 287 (288)
T ss_dssp TEEEEECCBCSSC---------BCCEEE-------EEETTTTEEEEEE-ECSSCCBSCEEEE
T ss_pred CEEEEEecCCCCe---------ecceEE-------EEECCCCEEEECC-CCCCCcEeEEEEE
Confidence 9999996542211 111233 3999999999996 7899999988764
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=99.97 E-value=8.3e-31 Score=278.60 Aligned_cols=285 Identities=16% Similarity=0.183 Sum_probs=214.2
Q ss_pred CceEEEEeecCCCC------CCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEEC
Q psy14726 347 HEILFAIGGWSGGS------PTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNA 419 (712)
Q Consensus 347 ~~~i~~~GG~~~~~------~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~ 419 (712)
.+.|+++||+.... ....++.||+.+++|..++....+..+..++.++. +++||++||.+. +++++||+
T Consensus 30 ~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~----~~~~~yd~ 105 (387)
T d1k3ia3 30 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDA----KKTSLYDS 105 (387)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSST----TCEEEEEG
T ss_pred CCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeecCCC----cceeEecC
Confidence 46899999975432 23357899999999987544444445555555555 889999998653 56899999
Q ss_pred CCCcEEEeCCCCCCcceeEEEEE-CCeEEEEcccCC-CCCCceeEEeecCCCceEEcccCCccccce-----------eE
Q psy14726 420 VTKVWKEIAPMNFKRCYVSTAVH-HDVIYAMGGYNG-QRRQNSVEKYNYTENQWSLIAPMNVERSDA-----------SA 486 (712)
Q Consensus 420 ~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~-~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~-----------~~ 486 (712)
.+++|..+++|+.+|..|+++++ +|+||++||... ....+++++||+.+++|+.++.++..+... .+
T Consensus 106 ~~~~w~~~~~~~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (387)
T d1k3ia3 106 SSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHA 185 (387)
T ss_dssp GGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSC
T ss_pred ccCcccccccccccccccceeeecCCceeeeccccccccccceeeeecCCCCceeecCCCcccccccccccceeecccee
Confidence 99999999999999999998887 679999999754 445789999999999999997665332211 11
Q ss_pred ---EEECCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCC-------CCCcceEEEE--ECCEEEEEcCCCCCCc---
Q psy14726 487 ---TTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMR-------HRRSGVSCIA--YHECIYVIGGFNGMSR--- 551 (712)
Q Consensus 487 ---~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p-------~~r~~~~~~~--~~~~iyv~GG~~~~~~--- 551 (712)
...++++|++||. ...++.||+.+..|.....++ .++.++++.. .++++|++||......
T Consensus 186 ~~~~~~~G~~~~~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~GG~~~~~~~~~ 260 (387)
T d1k3ia3 186 WLFGWKKGSVFQAGPS-----TAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDA 260 (387)
T ss_dssp CEEECGGGCEEECCSS-----SEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBC
T ss_pred EEEEeCCCCEEEecCc-----CCcEEecCcccCcEeeccccccCcccCcccccccEEEeeccCCceEEEEeccCCCCCcc
Confidence 1115666666664 357899999999999886443 2333444433 3799999999643221
Q ss_pred cceEE-----EEeCCCCcEEEcCCCCCCccceEEEEE-CCEEEEEcccCC------CceeeeEEEEECCCCeEEEccCCC
Q psy14726 552 MCNGE-----KYNPVTKTWSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNG------VTTIYHVECYDEKTDEWYEATDMN 619 (712)
Q Consensus 552 ~~~v~-----~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~------~~~~~~v~~yd~~~~~W~~~~~~p 619 (712)
..... .++...+.|+.++.||.+|..|+++++ +++||++||... ....+.+++|||++++|+.+++||
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~dg~i~v~GG~~~~~~~~~~~~~~~ve~Ydp~~~~W~~~~~~~ 340 (387)
T d1k3ia3 261 TTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNS 340 (387)
T ss_dssp CCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCS
T ss_pred cceeecccccccccCCCceeeccccccccccceeeeccCCeEEEECCcccCccCCCCcEeceEEEEECCCCeEEECCCCC
Confidence 12222 234456689999999999999999888 789999999753 234557999999999999999999
Q ss_pred CcccceEEEEE--cCcceeEecc
Q psy14726 620 IYRSALSACVI--MGLPNVYDYI 640 (712)
Q Consensus 620 ~~r~~~~~~~~--~~~~~v~~~~ 640 (712)
.+|.+|+++++ +++++++++.
T Consensus 341 ~~R~~Hs~a~l~~dG~v~v~GG~ 363 (387)
T d1k3ia3 341 IVRVYHSISLLLPDGRVFNGGGG 363 (387)
T ss_dssp SCCCTTEEEEECTTSCEEEEECC
T ss_pred CcccceEEEEECCCCEEEEEeCC
Confidence 99999998888 7899998664
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=99.96 E-value=8.6e-29 Score=262.89 Aligned_cols=299 Identities=13% Similarity=0.115 Sum_probs=216.7
Q ss_pred CCCCcEEEcccCCCCCCCcceEEEEECCEEEEEeecCCC------CccceEEEEECCCCcEEEeCCCCCCccee--EEE-
Q psy14726 370 TRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGN------EYYNSCRCFNAVTKVWKEIAPMNFKRCYV--STA- 440 (712)
Q Consensus 370 ~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~------~~~~~v~~yd~~~~~W~~~~~~~~~r~~~--~~~- 440 (712)
|..++|.. ..++|..|..++++..+++||+|||.... .....++.||+.+++|..+++++.+|..+ +.+
T Consensus 6 p~~g~W~~--~~~~p~~~~~~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~ 83 (387)
T d1k3ia3 6 PGLGRWGP--TIDLPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISM 83 (387)
T ss_dssp TTSCEEEE--EEECSSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEE
T ss_pred CCCCccCC--cCCCCccccEEEEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcccceeEEEE
Confidence 56788987 45566666655444459999999997532 23446889999999999888777766543 333
Q ss_pred EECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE-CCEEEEEcccCC-CCccCceEEeeCCCCee
Q psy14726 441 VHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL-QGKIYITGGFNG-HNCLNSCEVYDPECNQW 518 (712)
Q Consensus 441 ~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~-~~~~~~v~~yd~~~~~W 518 (712)
..+++||++||.+. +++++||+.+++|+.+++||.+|..|+++++ ++++|++||... ...++++++||+.+++|
T Consensus 84 ~~~g~i~v~Gg~~~----~~~~~yd~~~~~w~~~~~~~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~W 159 (387)
T d1k3ia3 84 DGNGQIVVTGGNDA----KKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTW 159 (387)
T ss_dssp CTTSCEEEECSSST----TCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEE
T ss_pred ecCCcEEEeecCCC----cceeEecCccCcccccccccccccccceeeecCCceeeeccccccccccceeeeecCCCCce
Confidence 35789999998653 5789999999999999999999999999988 789999999754 46789999999999999
Q ss_pred EEeCCCCCCCcc--------------eEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCC-------Cccc
Q psy14726 519 TLIEPMRHRRSG--------------VSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYN-------PRSN 577 (712)
Q Consensus 519 ~~~~~~p~~r~~--------------~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~-------~r~~ 577 (712)
+.++.++.+... ......++++|++||. ...++.||+.+..|...+.++. ++.+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (387)
T d1k3ia3 160 TSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPS-----TAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCG 234 (387)
T ss_dssp EEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSS-----SEEEEEECSTTCEEEEEEECEETTEECCCCBTC
T ss_pred eecCCCcccccccccccceeeccceeEEEEeCCCCEEEecCc-----CCcEEecCcccCcEeeccccccCcccCcccccc
Confidence 999865433211 1122235677777764 4678999999999998855433 3334
Q ss_pred eEEEE--ECCEEEEEcccCCCce--------eeeEEEEECCCCeEEEccCCCCcccceEEEEE-cCcceeEeccccccch
Q psy14726 578 FAIEV--IDDMIFAIGGFNGVTT--------IYHVECYDEKTDEWYEATDMNIYRSALSACVI-MGLPNVYDYIHQHRDS 646 (712)
Q Consensus 578 ~~~~~--~~~~i~v~GG~~~~~~--------~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~~~v~~~~~~~~~~ 646 (712)
+++.. .++++|++||...... ..+++.+++..+.|..++.||.+|..++++++ ++++|++++...+...
T Consensus 235 ~~~~~~~~~g~v~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~dg~i~v~GG~~~~~~~ 314 (387)
T d1k3ia3 235 NAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPF 314 (387)
T ss_dssp EEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTT
T ss_pred cEEEeeccCCceEEEEeccCCCCCcccceeecccccccccCCCceeeccccccccccceeeeccCCeEEEECCcccCccC
Confidence 44333 3899999999764321 12233345566789999999999999998888 5689998765543320
Q ss_pred hhHHhhhhhhcccccccccccccCCcccccccCccCCCCccccc
Q psy14726 647 LMEEKRQKLLAIEGRQRQNQSEEGNSSQQSVLPSSNSNVSSSDG 690 (712)
Q Consensus 647 ~~~~~~~~~~~~~~~~~q~~~~~~~~~~w~~~p~~~~~~~~~~~ 690 (712)
. ....+..+|. ||+..++|+.++ .|+..|.++.
T Consensus 315 ~---~~~~~~~ve~-------Ydp~~~~W~~~~-~~~~~R~~Hs 347 (387)
T d1k3ia3 315 E---DSTPVFTPEI-------YVPEQDTFYKQN-PNSIVRVYHS 347 (387)
T ss_dssp C---CCSBCCCCEE-------EEGGGTEEEECC-CCSSCCCTTE
T ss_pred C---CCcEeceEEE-------EECCCCeEEECC-CCCCcccceE
Confidence 0 1112223443 999999999997 5778887644
|
| >d1r29a_ d.42.1.1 (A:) B-cell lymphoma 6 (Bcl6) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: POZ domain superfamily: POZ domain family: BTB/POZ domain domain: B-cell lymphoma 6 (Bcl6) protein BTB domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=1.5e-25 Score=194.32 Aligned_cols=116 Identities=25% Similarity=0.522 Sum_probs=110.5
Q ss_pred chhHHHHHHHHHHHHhcCCCccEEEEecCCcEEeceeeeecccCHHHHHhhcCCCCcCCccceEEcCCCCHHHHHHHhhh
Q psy14726 73 RAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIPGVDASVMTSLIEY 152 (712)
Q Consensus 73 ~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~e~~~~~~i~l~~~~~~~f~~~l~~ 152 (712)
..|+..+++.|++|++++.+|||+|.+ +|++|+|||+||+++|+||++||.+++.|+.. ..+.++++++++|+.+|+|
T Consensus 6 ~~h~~~ll~~l~~l~~~~~~~Dv~l~v-~~~~~~~Hk~vLa~~S~~F~~~f~~~~~e~~~-~~~~~~~v~~~~f~~ll~~ 83 (122)
T d1r29a_ 6 TRHASDVLLNLNRLRSRDILTDVVIVV-SREQFRAHKTVLMACSGLFYSIFTDQLKRNLS-VINLDPEINPEGFNILLDF 83 (122)
T ss_dssp TTHHHHHHHHHHHHHHTTCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTSTTTTTCS-EEECCTTSCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCCCeEEEEEE-CCEEEEEehHHhhhCCHHHHHHhccchhhhcc-eeeeecccCHHHHHHHHhh
Confidence 368899999999999999999999999 99999999999999999999999999998887 7777789999999999999
Q ss_pred hccCceecChhhHHHHHHHhhhcChHHHHHHHHHhhcc
Q psy14726 153 AYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKR 190 (712)
Q Consensus 153 ~Yt~~~~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~ 190 (712)
||||++.++.+++.+++.+|++|+++.|++.|.+||+.
T Consensus 84 ~Ytg~~~i~~~~v~~ll~~A~~l~i~~L~~~C~~~L~~ 121 (122)
T d1r29a_ 84 MYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKA 121 (122)
T ss_dssp HHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred hcCCeecCchhhHHHHHHHHHHHCcHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999875
|
| >d1buoa_ d.42.1.1 (A:) Promyelocytic leukaemia zinc finger (PLZF) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: POZ domain superfamily: POZ domain family: BTB/POZ domain domain: Promyelocytic leukaemia zinc finger (PLZF) protein BTB domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=4.3e-25 Score=190.15 Aligned_cols=112 Identities=21% Similarity=0.451 Sum_probs=105.4
Q ss_pred CchhHHHHHHHHHHHHhcCCCccEEEEecCCcEEeceeeeecccCHHHHHhhcCCCCcCCccceEEcCCCCHHHHHHHhh
Q psy14726 72 DRAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIPGVDASVMTSLIE 151 (712)
Q Consensus 72 ~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~e~~~~~~i~l~~~~~~~f~~~l~ 151 (712)
+..|++.+++.|+++|+++.+|||+|.| +|++|+|||+|||++|+||++||.++ . .+|.++++++++|+.+|+
T Consensus 8 ~~~h~~~ll~~l~~l~~~~~~~Dv~l~v-~~~~~~aHk~vLaa~S~~F~~lf~~~-----~-~~i~~~~v~~~~f~~ll~ 80 (121)
T d1buoa_ 8 NPSHPTGLLCKANQMRLAGTLCDVVIMV-DSQEFHAHRTVLACTSKMFEILFHRN-----S-QHYTLDFLSPKTFQQILE 80 (121)
T ss_dssp CTTHHHHHHHHHHHHHHHTTTCCEEEEE-SSCEEEECHHHHHHHCHHHHHHTTSC-----C-SEEEECSSCHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHhcCCcEeEEEEE-CCEEEEEEHHHhcccChhhhhhccCc-----c-ceeecCCCCHHHHHHHHH
Confidence 4478999999999999999999999999 99999999999999999999999753 3 579999999999999999
Q ss_pred hhccCceecChhhHHHHHHHhhhcChHHHHHHHHHhhcc
Q psy14726 152 YAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKR 190 (712)
Q Consensus 152 ~~Yt~~~~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~ 190 (712)
|||||++.++.+++.+++.+|++|++++|++.|++||+.
T Consensus 81 ~~Ytg~i~l~~~~v~~ll~~A~~l~~~~L~~~C~~~L~~ 119 (121)
T d1buoa_ 81 YAYTATLQAKAEDLDDLLYAAEILEIEYLEEQCLKMLET 119 (121)
T ss_dssp HHHHSCCCCCGGGHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred heEccccCCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999853
|
| >d1hv2a_ d.42.1.1 (A:) Elongin C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: POZ domain superfamily: POZ domain family: BTB/POZ domain domain: Elongin C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.13 E-value=2.5e-06 Score=68.32 Aligned_cols=80 Identities=21% Similarity=0.439 Sum_probs=66.9
Q ss_pred EEEEecCCcEEeceeeeecccCHHHHHhhcCCCCcCCccceEEcCCCCHHHHHHHhhhhcc--------------Cceec
Q psy14726 95 ATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIPGVDASVMTSLIEYAYL--------------RKLHI 160 (712)
Q Consensus 95 v~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~e~~~~~~i~l~~~~~~~f~~~l~~~Yt--------------~~~~i 160 (712)
|+|+..||.+|.+.+.+ |..|..++.|+.+...++. ..|.+++++..+++.+++|++. .+.++
T Consensus 6 v~L~SsDg~~f~V~~~~-A~~S~tI~~ml~~~~~e~~--~~Ipl~~V~s~iL~kViey~~~h~~~~~~~~~~~~~~efdv 82 (99)
T d1hv2a_ 6 VTLVSKDDKEYEISRSA-AMISPTLKAMIEGPFRESK--GRIELKQFDSHILEKAVEYLNYNLKYSGVSEDDDEIPEFEI 82 (99)
T ss_dssp EEEEETTTEEEEEEHHH-HTTCHHHHHHHHSSTTTCT--TEEEETTSCHHHHHHHHHHHHHHHHHHHHCSSCSSCCCCCC
T ss_pred EEEEcCCCCEEEeeHHH-HHHhHHHHHHHHccCCCCc--CccccCCCChHHHHHHHHHHHHhhhCcCcccccccCCCCCC
Confidence 78888899999999998 6689999999987666654 4799999999999999999953 12356
Q ss_pred ChhhHHHHHHHhhhcCh
Q psy14726 161 TEDNVASLLLATDFFCM 177 (712)
Q Consensus 161 ~~~~~~~ll~~A~~~~i 177 (712)
+.+.+.+|+.||++|+|
T Consensus 83 d~~~l~eLi~AAnyLdI 99 (99)
T d1hv2a_ 83 PTEMSLELLLAADYLSI 99 (99)
T ss_dssp CHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHhhhCC
Confidence 67789999999999875
|
| >d2c9wc1 d.42.1.1 (C:17-112) Elongin C {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: POZ domain superfamily: POZ domain family: BTB/POZ domain domain: Elongin C species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.10 E-value=2.2e-06 Score=68.07 Aligned_cols=81 Identities=17% Similarity=0.340 Sum_probs=60.3
Q ss_pred EEEEecCCcEEeceeeeecccCHHHHHhhcC--CCCcCCccceEEcCCCCHHHHHHHhhhhcc-----C------ceecC
Q psy14726 95 ATIVLADNSHFPIHRNILCACSDYFRALFTT--SLHDQEKFSLVEIPGVDASVMTSLIEYAYL-----R------KLHIT 161 (712)
Q Consensus 95 v~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~--~~~e~~~~~~i~l~~~~~~~f~~~l~~~Yt-----~------~~~i~ 161 (712)
|+|+..||.+|.+.+.+ |..|..++.||.. ...++.. ..|.|++++..+|+.+++|++. . +.+++
T Consensus 3 i~L~SsDg~~f~V~~~~-A~~S~tI~~ml~~~~~~~e~~~-~~IpL~nV~s~iL~kViey~~~h~~~~~~~~~~~~fdi~ 80 (96)
T d2c9wc1 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENET-NEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIA 80 (96)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHC-------------CEEECTTCCHHHHHHHHHHHHHHHHTC----CCCCCCCC
T ss_pred EEEEcCCCCEEEeeHHH-HHHhHHHHHHHhccCccccCCC-CeeECCCCCHHHHHHHHHHHHhhccCcCCcCCCCCCcCC
Confidence 67888899999999999 7789999999965 3355555 7899999999999999999942 1 23477
Q ss_pred hhhHHHHHHHhhhcCh
Q psy14726 162 EDNVASLLLATDFFCM 177 (712)
Q Consensus 162 ~~~~~~ll~~A~~~~i 177 (712)
.+.+.+|+.||++|++
T Consensus 81 ~~~l~eLi~AAnyLd~ 96 (96)
T d2c9wc1 81 PEIALELLMAANFLDC 96 (96)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhhhcC
Confidence 7888999999998863
|
| >d3kvta_ d.42.1.2 (A:) akv3.1 voltage-gated potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: POZ domain superfamily: POZ domain family: Tetramerization domain of potassium channels domain: akv3.1 voltage-gated potassium channel species: California sea hare (Aplysia californica) [TaxId: 6500]
Probab=97.03 E-value=6.3e-05 Score=60.25 Aligned_cols=89 Identities=16% Similarity=0.199 Sum_probs=67.3
Q ss_pred EEEEecCCcEEeceeeeecccC-HHHHHhhcCCCCcCCccceEEcCCCCHHHHHHHhhhhccCceecChh-hHHHHHHHh
Q psy14726 95 ATIVLADNSHFPIHRNILCACS-DYFRALFTTSLHDQEKFSLVEIPGVDASVMTSLIEYAYLRKLHITED-NVASLLLAT 172 (712)
Q Consensus 95 v~l~v~~~~~~~~Hk~vL~~~S-~yF~~mf~~~~~e~~~~~~i~l~~~~~~~f~~~l~~~Yt~~~~i~~~-~~~~ll~~A 172 (712)
|+|.| +|+.|...+..|.... .+|..++............+.| |=+|..|+.||+|+-+|.+.++.+ .+..+++-|
T Consensus 4 I~LNV-GG~~F~t~~~tL~~~~~s~l~~~~~~~~~~~~~~~~~fi-DRdp~~F~~IL~ylR~g~l~~p~~~~~~~l~~Ea 81 (103)
T d3kvta_ 4 VIINV-GGIRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFF-DRHPGVFAQIINYYRSGKLHYPTDVCGPLFEEEL 81 (103)
T ss_dssp EEEEE-TTEEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEE-CSCTTTHHHHHHHHHHSCBCCCSSSCHHHHHHHH
T ss_pred EEEEE-CCEEEEEeHHHHhhCccchhHHHHcCCCccCCCCCcEEe-cCCHHHHHHHHHHHccCCcccccccCHHHHHHHH
Confidence 78899 9999999999998654 3666666554322222256777 689999999999999999987755 467788999
Q ss_pred hhcChH-HHHHHHH
Q psy14726 173 DFFCMS-KAQDLCC 185 (712)
Q Consensus 173 ~~~~i~-~L~~~c~ 185 (712)
.+|+|+ .+++.|+
T Consensus 82 ~yygi~~~~l~~Cc 95 (103)
T d3kvta_ 82 EFWGLDSNQVEPCC 95 (103)
T ss_dssp HHHTCCGGGBCGGG
T ss_pred HHcCCCHHHHHHHh
Confidence 999996 4566663
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=96.95 E-value=0.14 Score=50.23 Aligned_cols=242 Identities=12% Similarity=0.114 Sum_probs=123.3
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEE
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 426 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 426 (712)
+..+++|+. ...|..||...+++..+..... ....-.++++. ++..++.||.+ ..+..+|+.+++|..
T Consensus 19 g~~la~~~~-----~~~i~iw~~~~~~~~~~~~l~g-H~~~V~~l~fsp~~~~l~s~s~D-----~~i~vWd~~~~~~~~ 87 (371)
T d1k8kc_ 19 RTQIAICPN-----NHEVHIYEKSGNKWVQVHELKE-HNGQVTGVDWAPDSNRIVTCGTD-----RNAYVWTLKGRTWKP 87 (371)
T ss_dssp SSEEEEECS-----SSEEEEEEEETTEEEEEEEEEC-CSSCEEEEEEETTTTEEEEEETT-----SCEEEEEEETTEEEE
T ss_pred CCEEEEEeC-----CCEEEEEECCCCCEEEEEEecC-CCCCEEEEEECCCCCEEEEEECC-----CeEEEEeeccccccc
Confidence 445566653 2368889988888765422110 01122334444 55666677754 358889999999987
Q ss_pred eCCCCCCccee-EEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCC
Q psy14726 427 IAPMNFKRCYV-STAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGH 502 (712)
Q Consensus 427 ~~~~~~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~ 502 (712)
........... ++.. -+++.++.|+.++. -.++.++.....|........-+..-.++.+ ++++++.|+.++
T Consensus 88 ~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~---i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~- 163 (371)
T d1k8kc_ 88 TLVILRINRAARCVRWAPNEKKFAVGSGSRV---ISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDF- 163 (371)
T ss_dssp EEECCCCSSCEEEEEECTTSSEEEEEETTSS---EEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTS-
T ss_pred ccccccccccccccccccccccceeecccCc---ceeeeeecccccccccccccccccccccccccccccceeccccCc-
Confidence 65544333322 3332 25666666664321 3455555555555544333222232233333 567778887664
Q ss_pred CccCceEEeeCCCCeeEEeC----------------CCCCCCcc-eEEEE-ECCEEEEEcCCCCCCccceEEEEeCCCCc
Q psy14726 503 NCLNSCEVYDPECNQWTLIE----------------PMRHRRSG-VSCIA-YHECIYVIGGFNGMSRMCNGEKYNPVTKT 564 (712)
Q Consensus 503 ~~~~~v~~yd~~~~~W~~~~----------------~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 564 (712)
.+..||.......... ........ ++++. -++..++.|+.+ ..+..||..+..
T Consensus 164 ----~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d-----~~i~iwd~~~~~ 234 (371)
T d1k8kc_ 164 ----KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHD-----STVCLADADKKM 234 (371)
T ss_dssp ----CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETT-----TEEEEEEGGGTT
T ss_pred ----EEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeecccccccccccC-----CcceEEeeeccc
Confidence 3556665543321110 00011111 22222 245566666654 467788876543
Q ss_pred E-EEcCCCCCCccceEEEE-ECCEEEEEcccCCCceeeeEEEEECCCCeEEEccCCC
Q psy14726 565 W-SQVPDMYNPRSNFAIEV-IDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMN 619 (712)
Q Consensus 565 W-~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p 619 (712)
= ..+..-..+ -.+++. -++.+++ +|.++.. .++.++.....|.....+.
T Consensus 235 ~~~~~~~~~~~--v~s~~fs~d~~~la-~g~d~~~---~~~~~~~~~~~~~~~~~~~ 285 (371)
T d1k8kc_ 235 AVATLASETLP--LLAVTFITESSLVA-AGHDCFP---VLFTYDSAAGKLSFGGRLD 285 (371)
T ss_dssp EEEEEECSSCC--EEEEEEEETTEEEE-EETTSSC---EEEEEETTTTEEEECCCCC
T ss_pred ceeeeeccccc--ceeeeecCCCCEEE-EEcCCce---EEEEeeCCCceEEEeeeec
Confidence 1 111111111 122332 3677665 4555432 5788999999998765443
|
| >d1nn7a_ d.42.1.2 (A:) Potassium channel kv4.2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: POZ domain superfamily: POZ domain family: Tetramerization domain of potassium channels domain: Potassium channel kv4.2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.67 E-value=0.00017 Score=57.88 Aligned_cols=83 Identities=12% Similarity=0.174 Sum_probs=63.6
Q ss_pred EEEEecCCcEEeceeeeecccCH-HHHHhhcCCCCcCCccceEEcCCCCHHHHHHHhhhhccCceecChh-hHHHHHHHh
Q psy14726 95 ATIVLADNSHFPIHRNILCACSD-YFRALFTTSLHDQEKFSLVEIPGVDASVMTSLIEYAYLRKLHITED-NVASLLLAT 172 (712)
Q Consensus 95 v~l~v~~~~~~~~Hk~vL~~~S~-yF~~mf~~~~~e~~~~~~i~l~~~~~~~f~~~l~~~Yt~~~~i~~~-~~~~ll~~A 172 (712)
|+|.| +|+.|...+..|..... +|..++...+..... .++.|+ =+|..|+.||+|+.+|++.+..+ ....+++-|
T Consensus 2 I~LNV-GG~~f~t~~~TL~~~p~s~l~~~~~~~~~~~~~-~~~FiD-Rdp~~F~~IL~ylR~G~l~~p~~~~~~~l~~Ea 78 (105)
T d1nn7a_ 2 IVLNV-SGTRFQTWQDTLERYPDTLLGSSERDFFYHPET-QQYFFD-RDPDIFRHILNFYRTGKLHYPRHECISAYDEEL 78 (105)
T ss_dssp EEEEE-TTEEEEECHHHHHTSCSSSTTSGGGGGGEEGGG-TEEEEC-SCTTTHHHHHHHHHHSCBCCCTTSCHHHHHHHH
T ss_pred EEEEE-CCEEEEEeHHHHhcCCCCCccccccccCcCCCC-CcEEEe-CCHHHHHHHHHHHhcCccccCCCccHHHHHHHH
Confidence 68899 99999999999976543 455555444444444 677774 68999999999999999877654 467788889
Q ss_pred hhcChHHH
Q psy14726 173 DFFCMSKA 180 (712)
Q Consensus 173 ~~~~i~~L 180 (712)
++|+|+++
T Consensus 79 ~fygi~~~ 86 (105)
T d1nn7a_ 79 AFFGLIPE 86 (105)
T ss_dssp HHHTCCSC
T ss_pred HHcCCCHH
Confidence 99999753
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=96.67 E-value=0.08 Score=50.88 Aligned_cols=229 Identities=10% Similarity=0.002 Sum_probs=109.3
Q ss_pred CceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEE
Q psy14726 347 HEILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWK 425 (712)
Q Consensus 347 ~~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~ 425 (712)
.+..++.|+.+ ..+..||................ ..-.+++.. ++..++.+|.+.. ..+..+|..+.+-.
T Consensus 69 ~g~~latg~~d-----g~i~iwd~~~~~~~~~~~~~~~~-~~v~~v~~s~d~~~l~~~~~~~~---~~~~v~~~~~~~~~ 139 (311)
T d1nr0a1 69 SGYYCASGDVH-----GNVRIWDTTQTTHILKTTIPVFS-GPVKDISWDSESKRIAAVGEGRE---RFGHVFLFDTGTSN 139 (311)
T ss_dssp TSSEEEEEETT-----SEEEEEESSSTTCCEEEEEECSS-SCEEEEEECTTSCEEEEEECCSS---CSEEEEETTTCCBC
T ss_pred CCCeEeccccC-----ceEeeeeeecccccccccccccc-Ccccccccccccccccccccccc---cccccccccccccc
Confidence 34556667643 36788887776542210111111 111223333 5666666664221 23556676655422
Q ss_pred EeCCCCCCcce-eEEEEE-CC-eEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccC
Q psy14726 426 EIAPMNFKRCY-VSTAVH-HD-VIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFN 500 (712)
Q Consensus 426 ~~~~~~~~r~~-~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~ 500 (712)
..+...... .+++.. ++ .+++.|+.+ ..+..||..+.+-...-. .....-.++.. ++++++.||.+
T Consensus 140 --~~l~~h~~~v~~v~~~~~~~~~l~sgs~d-----~~i~i~d~~~~~~~~~~~--~~~~~i~~v~~~p~~~~l~~~~~d 210 (311)
T d1nr0a1 140 --GNLTGQARAMNSVDFKPSRPFRIISGSDD-----NTVAIFEGPPFKFKSTFG--EHTKFVHSVRYNPDGSLFASTGGD 210 (311)
T ss_dssp --BCCCCCSSCEEEEEECSSSSCEEEEEETT-----SCEEEEETTTBEEEEEEC--CCSSCEEEEEECTTSSEEEEEETT
T ss_pred --ccccccccccccccccccceeeecccccc-----cccccccccccccccccc--cccccccccccCcccccccccccc
Confidence 222211111 222222 33 456667643 357888887655332211 11112223333 66777777765
Q ss_pred CCCccCceEEeeCCCCeeEEeCCCC-CCC----cceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCC
Q psy14726 501 GHNCLNSCEVYDPECNQWTLIEPMR-HRR----SGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYN 573 (712)
Q Consensus 501 ~~~~~~~v~~yd~~~~~W~~~~~~p-~~r----~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~ 573 (712)
+ .+..||..+++-...-... ... .....+.+ +++.++.||.+ ..+..||..+.+-...-+...
T Consensus 211 ~-----~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~D-----g~v~iwd~~t~~~~~~l~~~~ 280 (311)
T d1nr0a1 211 G-----TIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD-----KTIKIWNVATLKVEKTIPVGT 280 (311)
T ss_dssp S-----CEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEEEECCS
T ss_pred c-----cccccccccccccccccccccccccccccccccccCCCCCEEEEEeCC-----CeEEEEECCCCcEEEEEECCC
Confidence 3 5778888776533321111 111 11222333 56677777754 468899998876432211111
Q ss_pred Cc-cceEEEEECCEEEEEcccCCCceeeeEEEEECC
Q psy14726 574 PR-SNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEK 608 (712)
Q Consensus 574 ~r-~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~ 608 (712)
.. .....+...+..++.||.++ .+.+|||+
T Consensus 281 ~~~~~~~~~~~~~~~l~s~s~dG-----~i~~wd~d 311 (311)
T d1nr0a1 281 RIEDQQLGIIWTKQALVSISANG-----FINFVNPE 311 (311)
T ss_dssp SGGGCEEEEEECSSCEEEEETTC-----CEEEEETT
T ss_pred CccceEEEEEecCCEEEEEECCC-----EEEEEeCC
Confidence 21 12222333444455666655 56777764
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=96.62 E-value=0.32 Score=46.37 Aligned_cols=190 Identities=9% Similarity=0.018 Sum_probs=97.3
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcce-eEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEE
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCY-VSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSL 473 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 473 (712)
++.+++.|+.+ ..+..||..+........++..... .+++. .+++.++.+|.+.. ..+.++|..+.+-
T Consensus 69 ~g~~latg~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~---~~~~v~~~~~~~~-- 138 (311)
T d1nr0a1 69 SGYYCASGDVH-----GNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRE---RFGHVFLFDTGTS-- 138 (311)
T ss_dssp TSSEEEEEETT-----SEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSS---CSEEEEETTTCCB--
T ss_pred CCCeEeccccC-----ceEeeeeeeccccccccccccccCcccccccccccccccccccccc---ccccccccccccc--
Confidence 67777888864 3588899888764322222111111 12222 35666666663221 2355566555432
Q ss_pred cccCCccccceeEEEE--CC-EEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--CCEEEEEcCCCC
Q psy14726 474 IAPMNVERSDASATTL--QG-KIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNG 548 (712)
Q Consensus 474 ~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~ 548 (712)
...+.........+.+ ++ .+++.|+.++ .+..||..+.+-...-. .......++.. ++.+++.|+.+
T Consensus 139 ~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~-----~i~i~d~~~~~~~~~~~--~~~~~i~~v~~~p~~~~l~~~~~d- 210 (311)
T d1nr0a1 139 NGNLTGQARAMNSVDFKPSRPFRIISGSDDN-----TVAIFEGPPFKFKSTFG--EHTKFVHSVRYNPDGSLFASTGGD- 210 (311)
T ss_dssp CBCCCCCSSCEEEEEECSSSSCEEEEEETTS-----CEEEEETTTBEEEEEEC--CCSSCEEEEEECTTSSEEEEEETT-
T ss_pred cccccccccccccccccccceeeeccccccc-----ccccccccccccccccc--cccccccccccCcccccccccccc-
Confidence 1222111111222333 33 3567777553 57889988765433321 11122222333 56666777654
Q ss_pred CCccceEEEEeCCCCcEEEc-CCCCCCccc----eEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCeE
Q psy14726 549 MSRMCNGEKYNPVTKTWSQV-PDMYNPRSN----FAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEW 612 (712)
Q Consensus 549 ~~~~~~v~~yd~~~~~W~~~-~~~p~~r~~----~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 612 (712)
..+..||..+.+-... ........+ ...+.+ ++..++.||.++ .+.+||..+++-
T Consensus 211 ----~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg-----~v~iwd~~t~~~ 272 (311)
T d1nr0a1 211 ----GTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADK-----TIKIWNVATLKV 272 (311)
T ss_dssp ----SCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTS-----EEEEEETTTTEE
T ss_pred ----ccccccccccccccccccccccccccccccccccccCCCCCEEEEEeCCC-----eEEEEECCCCcE
Confidence 4678899877654332 111111111 122333 577788888765 588999988764
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=96.62 E-value=0.084 Score=52.07 Aligned_cols=150 Identities=10% Similarity=0.132 Sum_probs=88.0
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcce-eEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEE
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCY-VSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSL 473 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 473 (712)
++.++++|+.+ ..+..||..++++..+..+...... .+++. .+++.++.||.+ ..+.+||+.+++|..
T Consensus 18 dg~~la~~~~~-----~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D-----~~i~vWd~~~~~~~~ 87 (371)
T d1k8kc_ 18 DRTQIAICPNN-----HEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTD-----RNAYVWTLKGRTWKP 87 (371)
T ss_dssp TSSEEEEECSS-----SEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETT-----SCEEEEEEETTEEEE
T ss_pred CCCEEEEEeCC-----CEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEECC-----CeEEEEeeccccccc
Confidence 55666777643 3688999999988776655322222 23333 356767777753 468899999999987
Q ss_pred cccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--CCEEEEEcCCCCC
Q psy14726 474 IAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGM 549 (712)
Q Consensus 474 ~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~ 549 (712)
.............+.+ +++.+++|+.++. -.++.++.....|.........+....++.. ++++++.|+.+
T Consensus 88 ~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~---i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D-- 162 (371)
T d1k8kc_ 88 TLVILRINRAARCVRWAPNEKKFAVGSGSRV---ISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD-- 162 (371)
T ss_dssp EEECCCCSSCEEEEEECTTSSEEEEEETTSS---EEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT--
T ss_pred ccccccccccccccccccccccceeecccCc---ceeeeeecccccccccccccccccccccccccccccceeccccC--
Confidence 6554433333334444 5666677765432 3456666666666555433322333333333 56677777765
Q ss_pred CccceEEEEeCCCC
Q psy14726 550 SRMCNGEKYNPVTK 563 (712)
Q Consensus 550 ~~~~~v~~yd~~~~ 563 (712)
..+..||....
T Consensus 163 ---~~v~v~~~~~~ 173 (371)
T d1k8kc_ 163 ---FKCRIFSAYIK 173 (371)
T ss_dssp ---SCEEEEECCCT
T ss_pred ---cEEEEEeeccC
Confidence 35567776544
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=96.57 E-value=0.1 Score=48.93 Aligned_cols=225 Identities=13% Similarity=0.088 Sum_probs=113.7
Q ss_pred eEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE--CCEEEEEeecCCCCccceEEEEECCCCcEEE
Q psy14726 349 ILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 426 (712)
Q Consensus 349 ~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 426 (712)
++|+.++. .+.|..+|+.+++.... .+. ....+++++. +.+||+.++. .+.+..||..+++-..
T Consensus 3 ~~yV~~~~-----~~~v~v~D~~t~~~~~~--i~~--g~~p~~va~spdG~~l~v~~~~-----~~~i~v~d~~t~~~~~ 68 (301)
T d1l0qa2 3 FAYIANSE-----SDNISVIDVTSNKVTAT--IPV--GSNPMGAVISPDGTKVYVANAH-----SNDVSIIDTATNNVIA 68 (301)
T ss_dssp EEEEEETT-----TTEEEEEETTTTEEEEE--EEC--SSSEEEEEECTTSSEEEEEEGG-----GTEEEEEETTTTEEEE
T ss_pred EEEEEECC-----CCEEEEEECCCCeEEEE--EEC--CCCceEEEEeCCCCEEEEEECC-----CCEEEEEECCCCceee
Confidence 56666542 24688899999987652 111 1223455555 4567777653 2468999999887433
Q ss_pred eCCCCCCcceeEEEEE-CC-eEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE-CC-EEEEEcccCCC
Q psy14726 427 IAPMNFKRCYVSTAVH-HD-VIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL-QG-KIYITGGFNGH 502 (712)
Q Consensus 427 ~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~ 502 (712)
. ++.....+.++.. ++ .+++.+. . ...+..+|..+.+....-.. ......++.. ++ .+++.+..+
T Consensus 69 ~--~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~dg~~~~~~~~~~-- 137 (301)
T d1l0qa2 69 T--VPAGSSPQGVAVSPDGKQVYVTNM-A----SSTLSVIDTTSNTVAGTVKT--GKSPLGLALSPDGKKLYVTNNGD-- 137 (301)
T ss_dssp E--EECSSSEEEEEECTTSSEEEEEET-T----TTEEEEEETTTTEEEEEEEC--SSSEEEEEECTTSSEEEEEETTT--
T ss_pred e--eecccccccccccccccccccccc-c----cceeeecccccceeeeeccc--cccceEEEeecCCCeeeeeeccc--
Confidence 2 2222223444443 33 4554433 2 24577788877765433221 1111222222 44 455544332
Q ss_pred CccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEE
Q psy14726 503 NCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAI 580 (712)
Q Consensus 503 ~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~ 580 (712)
..+..++..+........... .-...+.. ++.+|+.+.. ...+..++............... ..+.
T Consensus 138 ---~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 205 (301)
T d1l0qa2 138 ---KTVSVINTVTKAVINTVSVGR--SPKGIAVTPDGTKVYVANFD-----SMSISVIDTVTNSVIDTVKVEAA--PSGI 205 (301)
T ss_dssp ---TEEEEEETTTTEEEEEEECCS--SEEEEEECTTSSEEEEEETT-----TTEEEEEETTTTEEEEEEECSSE--EEEE
T ss_pred ---cceeeeeccccceeeecccCC--CceEEEeeccccceeeeccc-----ccccccccccceeeeecccccCC--ccee
Confidence 356778887776544322221 11222222 3456666542 24556666666655544322211 1222
Q ss_pred EEE--CCEEEEEcccCCCceeeeEEEEECCCCeEE
Q psy14726 581 EVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEWY 613 (712)
Q Consensus 581 ~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 613 (712)
+.. +..+|+.+... ..+.+.+||+.+.+-.
T Consensus 206 ~~~~~g~~~~v~~~~~---~~~~v~v~D~~t~~~~ 237 (301)
T d1l0qa2 206 AVNPEGTKAYVTNVDK---YFNTVSMIDTGTNKIT 237 (301)
T ss_dssp EECTTSSEEEEEEECS---SCCEEEEEETTTTEEE
T ss_pred eccccccccccccccc---eeeeeeeeecCCCeEE
Confidence 222 45565553321 1236899999887643
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.44 E-value=0.2 Score=47.62 Aligned_cols=211 Identities=9% Similarity=-0.029 Sum_probs=110.2
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA 475 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 475 (712)
++.||.+-- ....++++|+.+++-... .+|.. ....+..-+|.+++... +.+.+||+.+++++.+.
T Consensus 29 ~~~l~wvDi-----~~~~I~r~d~~~g~~~~~-~~~~~-~~~i~~~~dg~l~va~~-------~gl~~~d~~tg~~~~l~ 94 (295)
T d2ghsa1 29 SGTAWWFNI-----LERELHELHLASGRKTVH-ALPFM-GSALAKISDSKQLIASD-------DGLFLRDTATGVLTLHA 94 (295)
T ss_dssp TTEEEEEEG-----GGTEEEEEETTTTEEEEE-ECSSC-EEEEEEEETTEEEEEET-------TEEEEEETTTCCEEEEE
T ss_pred CCEEEEEEC-----CCCEEEEEECCCCeEEEE-ECCCC-cEEEEEecCCCEEEEEe-------CccEEeecccceeeEEe
Confidence 456665532 135689999999875543 22322 12222335677777532 45999999999998886
Q ss_pred cCCcc----ccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCeeEEeC-CCCCCCcceEEEEE--CCEEEEEcCCCC
Q psy14726 476 PMNVE----RSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIE-PMRHRRSGVSCIAY--HECIYVIGGFNG 548 (712)
Q Consensus 476 ~~p~~----r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~-~~p~~r~~~~~~~~--~~~iyv~GG~~~ 548 (712)
..+.. |.+...+--+|++|+...... .....-..|....++.+.+. .+.. ..+.+.. ++.+|+..-.
T Consensus 95 ~~~~~~~~~~~nd~~vd~~G~iw~~~~~~~-~~~~~g~l~~~~~g~~~~~~~~~~~---~Ng~~~s~d~~~l~~~dt~-- 168 (295)
T d2ghsa1 95 ELESDLPGNRSNDGRMHPSGALWIGTMGRK-AETGAGSIYHVAKGKVTKLFADISI---PNSICFSPDGTTGYFVDTK-- 168 (295)
T ss_dssp CSSTTCTTEEEEEEEECTTSCEEEEEEETT-CCTTCEEEEEEETTEEEEEEEEESS---EEEEEECTTSCEEEEEETT--
T ss_pred eeecCCCcccceeeEECCCCCEEEEecccc-ccccceeEeeecCCcEEEEeeccCC---cceeeecCCCceEEEeecc--
Confidence 55432 222222223788887543221 11223334444456655543 1111 1222222 3457776532
Q ss_pred CCccceEEEEeCCCCc------EEEcCCCCCCccc-eEEEE-ECCEEEEEcccCCCceeeeEEEEECCCCeEEEccCCCC
Q psy14726 549 MSRMCNGEKYNPVTKT------WSQVPDMYNPRSN-FAIEV-IDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNI 620 (712)
Q Consensus 549 ~~~~~~v~~yd~~~~~------W~~~~~~p~~r~~-~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~ 620 (712)
...+++|+...+. .......+..... .++++ -+|.||+..-.. ..|.+|||+......+ .+|.
T Consensus 169 ---~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~-----g~V~~~dp~G~~~~~i-~lP~ 239 (295)
T d2ghsa1 169 ---VNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGE-----GAVDRYDTDGNHIARY-EVPG 239 (295)
T ss_dssp ---TCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETT-----TEEEEECTTCCEEEEE-ECSC
T ss_pred ---cceeeEeeecccccccccceEEEeccCcccccccceEEcCCCCEEeeeeCC-----CceEEecCCCcEeeEe-cCCC
Confidence 4678888764321 1111112222222 23333 267888762111 2689999988777666 4565
Q ss_pred cccceEEEEEcC----cceeE
Q psy14726 621 YRSALSACVIMG----LPNVY 637 (712)
Q Consensus 621 ~r~~~~~~~~~~----~~~v~ 637 (712)
++ .++|..++ .+||-
T Consensus 240 ~~--~T~~~FGG~d~~~LyvT 258 (295)
T d2ghsa1 240 KQ--TTCPAFIGPDASRLLVT 258 (295)
T ss_dssp SB--EEEEEEESTTSCEEEEE
T ss_pred Cc--eEEEEEeCCCCCEEEEE
Confidence 43 45666653 36665
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.29 E-value=0.47 Score=44.63 Aligned_cols=217 Identities=12% Similarity=0.175 Sum_probs=112.8
Q ss_pred eEEEEECCCCcEEEcccCCCCCCCcceEEEEECCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEEC
Q psy14726 364 FVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHH 443 (712)
Q Consensus 364 ~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~ 443 (712)
.+..++..+......... ..............++.|+.+ ..+..+|+...+-... +............+
T Consensus 118 ~i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~d-----~~i~~~d~~~~~~~~~--~~~~~~~~~~~~~~ 186 (342)
T d2ovrb2 118 TLRVWDIETGQCLHVLMG----HVAAVRCVQYDGRRVVSGAYD-----FMVKVWDPETETCLHT--LQGHTNRVYSLQFD 186 (342)
T ss_dssp EEEEEESSSCCEEEEEEC----CSSCEEEEEECSSCEEEEETT-----SCEEEEEGGGTEEEEE--ECCCSSCEEEEEEC
T ss_pred eEEEeecccccceeeeec----ccccceeeccccceeeeecCC-----CeEEEeecccceeeEE--EcCcccccccccCC
Confidence 355566665554432111 111222333344555566543 3467778776553322 11112223344567
Q ss_pred CeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCeeEE-eC
Q psy14726 444 DVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTL-IE 522 (712)
Q Consensus 444 ~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-~~ 522 (712)
+..++.|+.+ ..+..||..+.+-..... .......+...++.+++.|+.++ .+..||..+.+-.. +.
T Consensus 187 ~~~l~s~~~d-----g~i~~~d~~~~~~~~~~~--~~~~~v~~~~~~~~~l~s~s~d~-----~i~iwd~~~~~~~~~~~ 254 (342)
T d2ovrb2 187 GIHVVSGSLD-----TSIRVWDVETGNCIHTLT--GHQSLTSGMELKDNILVSGNADS-----TVKIWDIKTGQCLQTLQ 254 (342)
T ss_dssp SSEEEEEETT-----SCEEEEETTTCCEEEEEC--CCCSCEEEEEEETTEEEEEETTS-----CEEEEETTTCCEEEEEC
T ss_pred CCEEEEEeCC-----CeEEEeecccceeeeEec--ccccceeEEecCCCEEEEEcCCC-----EEEEEeccccccccccc
Confidence 7777777754 358888887765432211 11122233444556667777653 58888887765433 33
Q ss_pred CCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEE-cCCCCCCcc--ce-EEEEE-CCEEEEEcccCCCc
Q psy14726 523 PMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQ-VPDMYNPRS--NF-AIEVI-DDMIFAIGGFNGVT 597 (712)
Q Consensus 523 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-~~~~p~~r~--~~-~~~~~-~~~i~v~GG~~~~~ 597 (712)
..........+...++.+++.||.+ ..+..||..+++... +.....+.. .. +++.. ++.+++.|+.+|..
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~s~s~D-----g~i~iwd~~tg~~i~~~~~~~~~~~~~~v~~v~~s~~~~~la~g~~dGt~ 329 (342)
T d2ovrb2 255 GPNKHQSAVTCLQFNKNFVITSSDD-----GTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTE 329 (342)
T ss_dssp STTSCSSCEEEEEECSSEEEEEETT-----SEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSS
T ss_pred ccceeeeceeecccCCCeeEEEcCC-----CEEEEEECCCCCEEEEEecccCCCCCCCEEEEEECCCCCEEEEEeCCCCC
Confidence 3233333444555677777788754 468899998876532 222222111 11 22222 55666777776643
Q ss_pred eeeeEEEEECCC
Q psy14726 598 TIYHVECYDEKT 609 (712)
Q Consensus 598 ~~~~v~~yd~~~ 609 (712)
. ..++++|.+.
T Consensus 330 ~-~~l~~~Df~~ 340 (342)
T d2ovrb2 330 E-TKLLVLDFDV 340 (342)
T ss_dssp C-CEEEEEECCC
T ss_pred e-eEEEEEeCCC
Confidence 2 3577777654
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=96.16 E-value=0.15 Score=47.75 Aligned_cols=228 Identities=14% Similarity=0.108 Sum_probs=112.7
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-C-CEEEEEeecCCCCccceEEEEECCCCcEE
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-G-YNIYVIGGFDGNEYYNSCRCFNAVTKVWK 425 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~-~~lyv~GG~~~~~~~~~v~~yd~~~~~W~ 425 (712)
+.+++.++. .+.|..||..+++-... . +.....++++.. + ..+++.+. . ...+..+|..+++..
T Consensus 44 ~~l~v~~~~-----~~~i~v~d~~t~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~ 109 (301)
T d1l0qa2 44 TKVYVANAH-----SNDVSIIDTATNNVIAT--V--PAGSSPQGVAVSPDGKQVYVTNM-A----SSTLSVIDTTSNTVA 109 (301)
T ss_dssp SEEEEEEGG-----GTEEEEEETTTTEEEEE--E--ECSSSEEEEEECTTSSEEEEEET-T----TTEEEEEETTTTEEE
T ss_pred CEEEEEECC-----CCEEEEEECCCCceeee--e--ecccccccccccccccccccccc-c----cceeeecccccceee
Confidence 345555442 24688999988775431 1 112223444444 3 34554433 2 245778888887754
Q ss_pred EeCCCCCCcceeEEEE-ECC-eEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCC
Q psy14726 426 EIAPMNFKRCYVSTAV-HHD-VIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNG 501 (712)
Q Consensus 426 ~~~~~~~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~ 501 (712)
..-... .....++. .++ .+++.+.. ...+..++..+.......+.. ..-...+.. ++.+|+.+...
T Consensus 110 ~~~~~~--~~~~~~~~~~dg~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~- 179 (301)
T d1l0qa2 110 GTVKTG--KSPLGLALSPDGKKLYVTNNG-----DKTVSVINTVTKAVINTVSVG--RSPKGIAVTPDGTKVYVANFDS- 179 (301)
T ss_dssp EEEECS--SSEEEEEECTTSSEEEEEETT-----TTEEEEEETTTTEEEEEEECC--SSEEEEEECTTSSEEEEEETTT-
T ss_pred eecccc--ccceEEEeecCCCeeeeeecc-----ccceeeeeccccceeeecccC--CCceEEEeeccccceeeecccc-
Confidence 432222 22233333 244 44444332 145677787777654332221 111122222 34566654322
Q ss_pred CCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEE
Q psy14726 502 HNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIE 581 (712)
Q Consensus 502 ~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~ 581 (712)
..+..++.................+......++.+|+.+.. .....+..+|+.+.+-... .+....-.+++
T Consensus 180 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~~~~---~~~~~v~v~D~~t~~~~~~--~~~~~~~~~va 250 (301)
T d1l0qa2 180 ----MSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVD---KYFNTVSMIDTGTNKITAR--IPVGPDPAGIA 250 (301)
T ss_dssp ----TEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEEC---SSCCEEEEEETTTTEEEEE--EECCSSEEEEE
T ss_pred ----cccccccccceeeeecccccCCcceeecccccccccccccc---ceeeeeeeeecCCCeEEEE--EcCCCCEEEEE
Confidence 34556666666655443322211111111124566665432 1235789999988754322 12122223344
Q ss_pred EE-C-CEEEEEcccCCCceeeeEEEEECCCCeEE
Q psy14726 582 VI-D-DMIFAIGGFNGVTTIYHVECYDEKTDEWY 613 (712)
Q Consensus 582 ~~-~-~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 613 (712)
.. + .+||+.++.++ .+.+||+++++-.
T Consensus 251 ~spdg~~l~va~~~~~-----~i~v~D~~t~~~~ 279 (301)
T d1l0qa2 251 VTPDGKKVYVALSFCN-----TVSVIDTATNTIT 279 (301)
T ss_dssp ECTTSSEEEEEETTTT-----EEEEEETTTTEEE
T ss_pred EeCCCCEEEEEECCCC-----eEEEEECCCCeEE
Confidence 43 4 46888876544 6889999998654
|
| >d1t1da_ d.42.1.2 (A:) Shaker potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: POZ domain superfamily: POZ domain family: Tetramerization domain of potassium channels domain: Shaker potassium channel species: California sea hare (Aplysia californica) [TaxId: 6500]
Probab=96.12 E-value=0.00091 Score=52.78 Aligned_cols=82 Identities=7% Similarity=0.079 Sum_probs=62.7
Q ss_pred EEEEecCCcEEeceeeeeccc-CHHHHHhhcCCCC-cCCccceEEcCCCCHHHHHHHhhhhcc-CceecChh-hHHHHHH
Q psy14726 95 ATIVLADNSHFPIHRNILCAC-SDYFRALFTTSLH-DQEKFSLVEIPGVDASVMTSLIEYAYL-RKLHITED-NVASLLL 170 (712)
Q Consensus 95 v~l~v~~~~~~~~Hk~vL~~~-S~yF~~mf~~~~~-e~~~~~~i~l~~~~~~~f~~~l~~~Yt-~~~~i~~~-~~~~ll~ 170 (712)
|+|.| +|+.|.+-+..|... +.+|.+|+..... ...+ .++.| |=+|..|+.||+|+-+ +.+..+.+ .+..+++
T Consensus 3 I~LNV-GG~~f~t~~~tL~~~p~s~l~~l~~~~~~~~~~~-g~~Fi-DRdp~~F~~IL~flR~~~~l~~~~~~~~~~l~~ 79 (100)
T d1t1da_ 3 VVINV-SGLRFETQLKTLNQFPDTLLGNPQKRNRYYDPLR-NEYFF-DRNRPSFDAILYFYQSGGRLRRPVNVPLDVFSE 79 (100)
T ss_dssp EEEEE-TTEEEEEEHHHHHTSTTSTTTCHHHHGGGEETTT-TEEEE-CSCSTTHHHHHHHHHTTSCCCCCTTSCHHHHHH
T ss_pred EEEEE-CCEEEEEeHHHHhhCCCchhHHHHhCCCcCCCCC-CeEEE-ecCHHHHHHHHHHHhcCCCcCCCCcccHHHHHH
Confidence 78899 999999999999875 5577777764332 2333 57777 4699999999999987 45555443 4677889
Q ss_pred HhhhcChHH
Q psy14726 171 ATDFFCMSK 179 (712)
Q Consensus 171 ~A~~~~i~~ 179 (712)
-|++|+|++
T Consensus 80 Ea~y~gi~~ 88 (100)
T d1t1da_ 80 EIKFYELGE 88 (100)
T ss_dssp HHHHTTCCH
T ss_pred HHHHcCCCH
Confidence 999999976
|
| >d1pexa_ b.66.1.1 (A:) Collagenase-3 (MMP-13), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 4-bladed beta-propeller superfamily: Hemopexin-like domain family: Hemopexin-like domain domain: Collagenase-3 (MMP-13), C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.08 E-value=0.19 Score=44.37 Aligned_cols=144 Identities=14% Similarity=0.083 Sum_probs=82.4
Q ss_pred EEEEECCEEEEEeecCCCCccceEEEEECCCCcEEEe------CCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEE
Q psy14726 391 GTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEI------APMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEK 463 (712)
Q Consensus 391 ~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~------~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~ 463 (712)
+++.+++.+|+|=| ..+|+++.....+... +.+|.. -..+... .++++|++-| +.+|+
T Consensus 13 Av~~~~g~~y~Fkg-------~~~wr~~~~~~~~~p~~i~~~w~~lp~~-IDAAf~~~~~~~~yffkg-------~~~w~ 77 (192)
T d1pexa_ 13 AITSLRGETMIFKD-------RFFWRLHPQQVDAELFLTKSFWPELPNR-IDAAYEHPSHDLIFIFRG-------RKFWA 77 (192)
T ss_dssp EEEEETTEEEEEET-------TEEEEECSSSSCCEEEEHHHHCTTSCSS-CCEEEEETTTTEEEEEET-------TEEEE
T ss_pred EEEEcCCeEEEEEC-------CEEEEEcCCCCCCcccchhhhCcCCCCc-ccceEEEcCCCEEEEEcC-------CEEEE
Confidence 56677999999977 3466666544433321 234432 1222222 2678998877 46888
Q ss_pred eecCCCce---EEccc--CCccccceeEEEE---CCEEEEEcccCCCCccCceEEeeCCCCeeEE-----e----CCCCC
Q psy14726 464 YNYTENQW---SLIAP--MNVERSDASATTL---QGKIYITGGFNGHNCLNSCEVYDPECNQWTL-----I----EPMRH 526 (712)
Q Consensus 464 yd~~~~~W---~~~~~--~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-----~----~~~p~ 526 (712)
|+..+..+ ..+.. +|..-...-++.. ++++|++-| +..++||..++.=.. + +.+|.
T Consensus 78 y~~~~~~~gyPk~i~~~~~~~~~~~idaA~~~~~~~~~y~Fkg-------~~y~~y~~~~~~~~~~~pk~I~~~w~gvp~ 150 (192)
T d1pexa_ 78 LNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSG-------NQVWRYDDTNHIMDKDYPRLIEEDFPGIGD 150 (192)
T ss_dssp ESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEET-------TEEEEEETTTTEECSSCCCBHHHHSTTSCS
T ss_pred EcCCcccCCCCeEeeeeecCCCCCCccEEEEECCCCEEEEEeC-------CEEEEEcCccccccCCCcEEHhhcCCCCCC
Confidence 87554333 12222 1222122233333 589999977 457888877664211 1 12232
Q ss_pred CCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcE
Q psy14726 527 RRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTW 565 (712)
Q Consensus 527 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 565 (712)
.-.++...++.+|++-| +..++||..+++=
T Consensus 151 --~vdAa~~~~g~~YfF~g-------~~y~r~~~~~~~v 180 (192)
T d1pexa_ 151 --KVDAVYEKNGYIYFFNG-------PIQFEYSIWSNRI 180 (192)
T ss_dssp --CCSEEEEETTEEEEEET-------TEEEEEETTTTEE
T ss_pred --CceEEEEeCCEEEEEEC-------CEEEEEeCCcCeE
Confidence 22345567999999987 5788898877643
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.08 E-value=0.35 Score=45.84 Aligned_cols=203 Identities=7% Similarity=-0.029 Sum_probs=106.9
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCC----Cccee
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNF----KRCYV 437 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~----~r~~~ 437 (712)
..|+.+|+.+++-.....+. ...+++.. ++.+++... +.+..||+.+++++.+..... .|.+.
T Consensus 40 ~~I~r~d~~~g~~~~~~~~~-----~~~~i~~~~dg~l~va~~-------~gl~~~d~~tg~~~~l~~~~~~~~~~~~nd 107 (295)
T d2ghsa1 40 RELHELHLASGRKTVHALPF-----MGSALAKISDSKQLIASD-------DGLFLRDTATGVLTLHAELESDLPGNRSND 107 (295)
T ss_dssp TEEEEEETTTTEEEEEECSS-----CEEEEEEEETTEEEEEET-------TEEEEEETTTCCEEEEECSSTTCTTEEEEE
T ss_pred CEEEEEECCCCeEEEEECCC-----CcEEEEEecCCCEEEEEe-------CccEEeecccceeeEEeeeecCCCccccee
Confidence 46888999988765432211 12233333 777776532 458999999999988755432 24444
Q ss_pred EEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEccc-CCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCC
Q psy14726 438 STAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAP-MNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPE 514 (712)
Q Consensus 438 ~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~-~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~ 514 (712)
..+--+|.+|+..... ......-..|....++.+.+.. +.. . -+.+.. ++.+|+.... .+.+++|+..
T Consensus 108 ~~vd~~G~iw~~~~~~-~~~~~~g~l~~~~~g~~~~~~~~~~~--~-Ng~~~s~d~~~l~~~dt~-----~~~I~~~~~d 178 (295)
T d2ghsa1 108 GRMHPSGALWIGTMGR-KAETGAGSIYHVAKGKVTKLFADISI--P-NSICFSPDGTTGYFVDTK-----VNRLMRVPLD 178 (295)
T ss_dssp EEECTTSCEEEEEEET-TCCTTCEEEEEEETTEEEEEEEEESS--E-EEEEECTTSCEEEEEETT-----TCEEEEEEBC
T ss_pred eEECCCCCEEEEeccc-cccccceeEeeecCCcEEEEeeccCC--c-ceeeecCCCceEEEeecc-----cceeeEeeec
Confidence 4555578888753322 1122233444444555554432 111 1 122222 4457776532 3567777653
Q ss_pred C--Ce----eEEeCCCCCCCcce-EEEE-ECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEEC--
Q psy14726 515 C--NQ----WTLIEPMRHRRSGV-SCIA-YHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVID-- 584 (712)
Q Consensus 515 ~--~~----W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~-- 584 (712)
. +. .......+...... ++++ -+|.||+..-. ...|.+|||+......+ .+|.++ .+.+.++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~-----~g~V~~~dp~G~~~~~i-~lP~~~--~T~~~FGG~ 250 (295)
T d2ghsa1 179 ARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWG-----EGAVDRYDTDGNHIARY-EVPGKQ--TTCPAFIGP 250 (295)
T ss_dssp TTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEET-----TTEEEEECTTCCEEEEE-ECSCSB--EEEEEEEST
T ss_pred ccccccccceEEEeccCcccccccceEEcCCCCEEeeeeC-----CCceEEecCCCcEeeEe-cCCCCc--eEEEEEeCC
Confidence 2 21 12222222222222 3333 25789987310 14799999987777666 344433 4445452
Q ss_pred --CEEEEEcccC
Q psy14726 585 --DMIFAIGGFN 594 (712)
Q Consensus 585 --~~i~v~GG~~ 594 (712)
+.|||.-...
T Consensus 251 d~~~LyvTta~~ 262 (295)
T d2ghsa1 251 DASRLLVTSARE 262 (295)
T ss_dssp TSCEEEEEEBCT
T ss_pred CCCEEEEEECCc
Confidence 4688875543
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=96.04 E-value=0.42 Score=45.13 Aligned_cols=123 Identities=15% Similarity=0.271 Sum_probs=63.8
Q ss_pred ceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE
Q psy14726 459 NSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY 536 (712)
Q Consensus 459 ~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 536 (712)
..+..||..+.+-... +......-.++.+ ++.+++.|+.++ .+..||.........-...........+.+
T Consensus 206 ~~v~i~d~~~~~~~~~--~~~h~~~i~~v~~~p~~~~l~s~s~d~-----~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 278 (340)
T d1tbga_ 206 ASAKLWDVREGMCRQT--FTGHESDINAICFFPNGNAFATGSDDA-----TCRLFDLRADQELMTYSHDNIICGITSVSF 278 (340)
T ss_dssp TEEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEEEEECCTTCCSCEEEEEE
T ss_pred ceEEEEECCCCcEEEE--EeCCCCCeEEEEECCCCCEEEEEeCCC-----eEEEEeecccccccccccccccCceEEEEE
Confidence 4577888776643221 1111111222233 567777777654 477888877765444333322222333333
Q ss_pred --CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE--CCEEEEEcccCC
Q psy14726 537 --HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNG 595 (712)
Q Consensus 537 --~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~ 595 (712)
++.+++.|+.+ ..+..||..+.+-.. .+......-..+.+ ++..++.||.++
T Consensus 279 s~~~~~l~~g~~d-----g~i~iwd~~~~~~~~--~~~~H~~~V~~l~~s~d~~~l~s~s~Dg 334 (340)
T d1tbga_ 279 SKSGRLLLAGYDD-----FNCNVWDALKADRAG--VLAGHDNRVSCLGVTDDGMAVATGSWDS 334 (340)
T ss_dssp CSSSCEEEEEETT-----SCEEEEETTTCCEEE--EECCCSSCEEEEEECTTSSCEEEEETTS
T ss_pred CCCCCEEEEEECC-----CEEEEEECCCCcEEE--EEcCCCCCEEEEEEeCCCCEEEEEccCC
Confidence 56677777654 468889987654322 22211111122223 567777888765
|
| >d1fs1b2 d.42.1.1 (B:2-68) Cyclin A/CDK2-associated p45, Skp1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: POZ domain superfamily: POZ domain family: BTB/POZ domain domain: Cyclin A/CDK2-associated p45, Skp1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.03 E-value=0.0044 Score=43.58 Aligned_cols=55 Identities=16% Similarity=0.309 Sum_probs=46.3
Q ss_pred EEEEecCCcEEeceeeeecccCHHHHHhhcCCCCcCCccceEEcCCCCHHHHHHHhhhhcc
Q psy14726 95 ATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIPGVDASVMTSLIEYAYL 155 (712)
Q Consensus 95 v~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~e~~~~~~i~l~~~~~~~f~~~l~~~Yt 155 (712)
|+|+..||.+|.+.+.+ |..|...+.|+... .. ..|.|++++..+|+.+++|++.
T Consensus 3 I~L~SsDg~~f~v~~~~-a~~S~tI~~ml~~~----~~-~~Ipl~~V~s~iL~kVieyc~~ 57 (61)
T d1fs1b2 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDL----GM-DPVPLPNVNAAILKKVIQWCTH 57 (61)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHT----CC-SSEECTTCCHHHHHHHHHHHHH
T ss_pred EEEEecCCCEEEecHHH-HHHhHHHHHHHhcC----CC-CCcccCCcCHHHHHHHHHHHHH
Confidence 67888899999999884 56799999999652 23 5699999999999999999964
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.82 E-value=0.5 Score=44.74 Aligned_cols=184 Identities=14% Similarity=0.159 Sum_probs=98.8
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA 475 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 475 (712)
++.+.+.|+.+ ..+..+|..+.+...................++..++.|+.+ ..+..||..+......
T Consensus 170 ~~~~~~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-----~~i~i~d~~~~~~~~~- 238 (355)
T d1nexb2 170 HGNIVVSGSYD-----NTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMD-----TTIRIWDLENGELMYT- 238 (355)
T ss_dssp ETTEEEEEETT-----SCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETT-----SCEEEEETTTCCEEEE-
T ss_pred ccceeeeeccc-----ceeeeeecccccceeeeeccccccccccccccceeeeccccc-----ceEEeeeccccccccc-
Confidence 34455555532 357888988877654433333333333333456666666643 4578888877654322
Q ss_pred cCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceE
Q psy14726 476 PMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNG 555 (712)
Q Consensus 476 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v 555 (712)
+........++..+++.++.|+.++ .+..||..+..-..... ........+...++.+++.|+ + ..+
T Consensus 239 -~~~h~~~v~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~g~-d-----~~i 305 (355)
T d1nexb2 239 -LQGHTALVGLLRLSDKFLVSAAADG-----SIRGWDANDYSRKFSYH-HTNLSAITTFYVSDNILVSGS-E-----NQF 305 (355)
T ss_dssp -ECCCSSCCCEEEECSSEEEEECTTS-----EEEEEETTTCCEEEEEE-CTTCCCCCEEEECSSEEEEEE-T-----TEE
T ss_pred -cccccccccccccccceeeeeeccc-----ccccccccccceecccc-cCCceEEEEEcCCCCEEEEEe-C-----CEE
Confidence 1111122344556777778887664 57788887665322211 112222334455777766554 2 468
Q ss_pred EEEeCCCCcEEEcCCCCCCcc-ceEEEEECCEEEEEcccCCCceeeeEEEEEC
Q psy14726 556 EKYNPVTKTWSQVPDMYNPRS-NFAIEVIDDMIFAIGGFNGVTTIYHVECYDE 607 (712)
Q Consensus 556 ~~yd~~~~~W~~~~~~p~~r~-~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~ 607 (712)
..||.++++.-.. .+..... -.+++..++.+++.|+.++.. .+|++|.
T Consensus 306 ~vwd~~tg~~~~~-~~~~~~~~V~~v~~~~~~~~~~~s~dg~~---~l~~~df 354 (355)
T d1nexb2 306 NIYNLRSGKLVHA-NILKDADQIWSVNFKGKTLVAAVEKDGQS---FLEILDF 354 (355)
T ss_dssp EEEETTTCCBCCS-CTTTTCSEEEEEEEETTEEEEEEESSSCE---EEEEEEC
T ss_pred EEEECCCCCEEEE-EecCCCCCEEEEEEcCCeEEEEEECCCcE---EEEEEeC
Confidence 8999988754211 1111111 223444577776677766643 3677774
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.78 E-value=0.57 Score=44.82 Aligned_cols=185 Identities=10% Similarity=0.047 Sum_probs=96.3
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcce-eEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEE
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCY-VSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSL 473 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 473 (712)
++..++.|+.+ ..+..||....+......+...... ...+. .++.+++.|+.+ ..+..+|..+++-..
T Consensus 108 dg~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-----~~i~~~~~~~~~~~~ 177 (337)
T d1gxra_ 108 DGCTLIVGGEA-----STLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD-----GNIAVWDLHNQTLVR 177 (337)
T ss_dssp TSSEEEEEESS-----SEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEE
T ss_pred CCCEEEEeecc-----cccccccccccccccccccccccccccccccccccccccccccc-----ccccccccccccccc
Confidence 66677777754 3588899887765544333222222 22222 255666666543 357888887765433
Q ss_pred cccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CCEEEEEcCCCCCC
Q psy14726 474 IAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HECIYVIGGFNGMS 550 (712)
Q Consensus 474 ~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~ 550 (712)
....... ...+..+ ++..++.|+.+ ..+..||..+.+-...-..+. .-.+++.. ++..++.|+.+
T Consensus 178 ~~~~~~~--~v~~l~~s~~~~~~~~~~~d-----~~v~i~d~~~~~~~~~~~~~~--~i~~l~~~~~~~~l~~~~~d--- 245 (337)
T d1gxra_ 178 QFQGHTD--GASCIDISNDGTKLWTGGLD-----NTVRSWDLREGRQLQQHDFTS--QIFSLGYCPTGEWLAVGMES--- 245 (337)
T ss_dssp EECCCSS--CEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEEEECSS--CEEEEEECTTSSEEEEEETT---
T ss_pred ccccccc--cccccccccccccccccccc-----ccccccccccceeeccccccc--ceEEEEEcccccccceeccc---
Confidence 2221111 1122222 56666777655 457888887765322212221 11222222 45566666643
Q ss_pred ccceEEEEeCCCCcEEEcCCCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 551 RMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 551 ~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
..+..||..+..-........ .-.+++.. +++.++.||.++ .+.+||..+++
T Consensus 246 --~~i~i~d~~~~~~~~~~~~~~--~i~~v~~s~~g~~l~s~s~Dg-----~i~iwd~~~~~ 298 (337)
T d1gxra_ 246 --SNVEVLHVNKPDKYQLHLHES--CVLSLKFAYCGKWFVSTGKDN-----LLNAWRTPYGA 298 (337)
T ss_dssp --SCEEEEETTSSCEEEECCCSS--CEEEEEECTTSSEEEEEETTS-----EEEEEETTTCC
T ss_pred --ccccccccccccccccccccc--ccceEEECCCCCEEEEEeCCC-----eEEEEECCCCC
Confidence 467888987765443322111 11122222 667777887664 57788877654
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=95.76 E-value=0.45 Score=44.38 Aligned_cols=109 Identities=12% Similarity=0.070 Sum_probs=63.5
Q ss_pred CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CCEEEEEcCCCCCCccceEEEEeCCCCcEEEc
Q psy14726 490 QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQV 568 (712)
Q Consensus 490 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 568 (712)
++++++.|+.+ ..+..||..+.+...+........-.+++.. ++..++.|+.+ ..+..||..++.....
T Consensus 147 ~~~~l~~g~~d-----g~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----~~i~~~~~~~~~~~~~ 216 (299)
T d1nr0a2 147 DKQFVAVGGQD-----SKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQS-----RKVIPYSVANNFELAH 216 (299)
T ss_dssp TSCEEEEEETT-----SEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETT-----SCEEEEEGGGTTEESC
T ss_pred ccccccccccc-----ccccccccccccccccccccccccccccccccccccccccccc-----cccccccccccccccc
Confidence 66777888765 3588888888776554332222222222222 45566666643 4688999887665433
Q ss_pred -CCCCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCeEE
Q psy14726 569 -PDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEWY 613 (712)
Q Consensus 569 -~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 613 (712)
..+.........+.+ ++..++.||.++ .+.+||..+....
T Consensus 217 ~~~~~~h~~~v~~l~~s~~~~~l~sgs~dg-----~i~iwd~~~~~~~ 259 (299)
T d1nr0a2 217 TNSWTFHTAKVACVSWSPDNVRLATGSLDN-----SVIVWNMNKPSDH 259 (299)
T ss_dssp CCCCCCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTCTTSC
T ss_pred cccccccccccccccccccccceEEEcCCC-----EEEEEECCCCCcc
Confidence 222222222222233 777888888765 5788998876543
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.70 E-value=0.74 Score=44.56 Aligned_cols=190 Identities=14% Similarity=0.111 Sum_probs=93.6
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA 475 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 475 (712)
++.+++.|+.++ .+..+|..+.+......-............++...+.|+.. ..+..+|..+..-....
T Consensus 132 ~~~~l~s~~~dg-----~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~-----~~i~~~d~~~~~~~~~~ 201 (388)
T d1erja_ 132 DGKFLATGAEDR-----LIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGD-----RTVRIWDLRTGQCSLTL 201 (388)
T ss_dssp TSSEEEEEETTS-----CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEEE
T ss_pred CCCcceeccccc-----ccccccccccccccccccccccccccccccccccccccccc-----eeeeeeecccccccccc
Confidence 566777787543 47888988887654432222211111122344555555532 45788887776544332
Q ss_pred cCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCC-----CCCcceEEEEE--CCEEEEEcCC
Q psy14726 476 PMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMR-----HRRSGVSCIAY--HECIYVIGGF 546 (712)
Q Consensus 476 ~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p-----~~r~~~~~~~~--~~~iyv~GG~ 546 (712)
..... ...++.. ++.+++.|+.++ .+..||..+......-..+ ........+.+ ++..++.|+.
T Consensus 202 ~~~~~--~~~~~~~~~~~~~l~~~~~d~-----~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~ 274 (388)
T d1erja_ 202 SIEDG--VTTVAVSPGDGKYIAAGSLDR-----AVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSL 274 (388)
T ss_dssp ECSSC--EEEEEECSTTCCEEEEEETTS-----CEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEET
T ss_pred ccccc--cccccccCCCCCeEEEEcCCC-----eEEEeecccCccceeeccccccccCCCCCEEEEEECCCCCEEEEEEC
Confidence 22211 1122222 567777777653 5788888877653332111 11111222222 4566666765
Q ss_pred CCCCccceEEEEeCCCCcEEEcCCCCC----------CccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCeE
Q psy14726 547 NGMSRMCNGEKYNPVTKTWSQVPDMYN----------PRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEW 612 (712)
Q Consensus 547 ~~~~~~~~v~~yd~~~~~W~~~~~~p~----------~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 612 (712)
+ ..+..||..+.........+. .......+.+ ++..++.|+.++ .+.+||..+++-
T Consensus 275 d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg-----~i~vwd~~~~~~ 342 (388)
T d1erja_ 275 D-----RSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDR-----GVLFWDKKSGNP 342 (388)
T ss_dssp T-----SEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTS-----EEEEEETTTCCE
T ss_pred C-----CcEEEEeccCCccccccccccccceeeecccccceEEEEEECCCCCEEEEEeCCC-----EEEEEECCCCcE
Confidence 4 467788876543322211110 0111122222 667778887665 688899887654
|
| >d1su3a2 b.66.1.1 (A:271-465) Collagenase (MMP1), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 4-bladed beta-propeller superfamily: Hemopexin-like domain family: Hemopexin-like domain domain: Collagenase (MMP1), C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.69 E-value=0.092 Score=46.58 Aligned_cols=143 Identities=15% Similarity=0.068 Sum_probs=82.4
Q ss_pred EEEEECCEEEEEeecCCCCccceEEEEECCCCcEEE--e----CCCCCCcceeEEEEE--CCeEEEEcccCCCCCCceeE
Q psy14726 391 GTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE--I----APMNFKRCYVSTAVH--HDVIYAMGGYNGQRRQNSVE 462 (712)
Q Consensus 391 ~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~--~----~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~ 462 (712)
+++.+++.+|+|-|. .+|+++........ + +.+|..- -++... ++++|++-| +.++
T Consensus 16 Av~~~~G~~y~Fkg~-------~~wr~~~~~~~~~p~~i~~~w~glp~~I--DAAf~~~~~~~~yfFkG-------~~y~ 79 (195)
T d1su3a2 16 AITTIRGEVMFFKDR-------FYMRTNPFYPEVELNFISVFWPQLPNGL--EAAYEFADRDEVRFFKG-------NKYW 79 (195)
T ss_dssp EEEEETTEEEEEETT-------EEEECCTTSSSCEEEEGGGTCTTSCSSC--CEEEEEGGGTEEEEEET-------TEEE
T ss_pred EEEEcCCeEEEEeCC-------EEEEeeCCCCccCccchHhhCcCCCCcc--cceEEecCCcEEEEECC-------cEEE
Confidence 566679999999772 35555544433321 1 2333322 123323 579999987 5788
Q ss_pred EeecCCCce---EEcc---cCCccccceeEE-EE--CCEEEEEcccCCCCccCceEEeeCCCCeeE-----EeC----CC
Q psy14726 463 KYNYTENQW---SLIA---PMNVERSDASAT-TL--QGKIYITGGFNGHNCLNSCEVYDPECNQWT-----LIE----PM 524 (712)
Q Consensus 463 ~yd~~~~~W---~~~~---~~p~~r~~~~~~-~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~-----~~~----~~ 524 (712)
+|+-.+..+ ..+. .+|......-++ .. ++++|++-| +..++||..+++-. .+. .+
T Consensus 80 ~y~~~~~~~g~p~~i~~~~G~p~~~~~idaa~~~~~~~~~Y~FkG-------~~y~ry~~~~~~vd~gyPk~I~~~w~Gv 152 (195)
T d1su3a2 80 AVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVA-------NKYWRYDEYKRSMDPGYPKMIAHDFPGI 152 (195)
T ss_dssp EEETTEECTTCSEEHHHHHCCCTTCCCCCEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCSEEHHHHSTTS
T ss_pred EEcCCccccCCCccchhhcCCCCCccccccccccCCCCeEEEEeC-------CEEEEEeccCccccCCcccccccccCCC
Confidence 887433221 1121 123222222233 33 579999988 46889998876421 111 23
Q ss_pred CCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcE
Q psy14726 525 RHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTW 565 (712)
Q Consensus 525 p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 565 (712)
|. .--++...++++|++-| +..++||+.+.+=
T Consensus 153 p~--~iDAAf~~~g~~YfFkg-------~~y~r~~~~~~~v 184 (195)
T d1su3a2 153 GH--KVDAVFMKDGFFYFFHG-------TRQYKFDPKTKRI 184 (195)
T ss_dssp CS--CCSEEEEETTEEEEEET-------TEEEEEETTTTEE
T ss_pred CC--CccEEEEECCeEEEEEC-------CEEEEEeCCcCEE
Confidence 32 22345567999999987 5788999877653
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.68 E-value=0.43 Score=45.73 Aligned_cols=215 Identities=13% Similarity=0.066 Sum_probs=102.9
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEE
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 426 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 426 (712)
+..++.|+.+ ..+..||................+ .-...+.. ++.+++.|+.+ ..+..+|..+++-..
T Consensus 109 g~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~s~~~d-----~~i~~~~~~~~~~~~ 177 (337)
T d1gxra_ 109 GCTLIVGGEA-----STLSIWDLAAPTPRIKAELTSSAP-ACYALAISPDSKVCFSCCSD-----GNIAVWDLHNQTLVR 177 (337)
T ss_dssp SSEEEEEESS-----SEEEEEECCCC--EEEEEEECSSS-CEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEE
T ss_pred CCEEEEeecc-----cccccccccccccccccccccccc-cccccccccccccccccccc-----ccccccccccccccc
Confidence 3445566542 357788877655433211111111 11222222 55566666643 357888888776433
Q ss_pred eCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE-CCEEEEEcccCCCCc
Q psy14726 427 IAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL-QGKIYITGGFNGHNC 504 (712)
Q Consensus 427 ~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~ 504 (712)
........ -.+++. .++..++.|+.+ ..+..||..+.+-...-..+ ..-.+++.. ++..++.|+.++
T Consensus 178 ~~~~~~~~-v~~l~~s~~~~~~~~~~~d-----~~v~i~d~~~~~~~~~~~~~--~~i~~l~~~~~~~~l~~~~~d~--- 246 (337)
T d1gxra_ 178 QFQGHTDG-ASCIDISNDGTKLWTGGLD-----NTVRSWDLREGRQLQQHDFT--SQIFSLGYCPTGEWLAVGMESS--- 246 (337)
T ss_dssp EECCCSSC-EEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEEEECS--SCEEEEEECTTSSEEEEEETTS---
T ss_pred cccccccc-ccccccccccccccccccc-----ccccccccccceeecccccc--cceEEEEEcccccccceecccc---
Confidence 32222111 122222 355666777643 46788888776522211111 111122222 566667776553
Q ss_pred cCceEEeeCCCCeeEEeCCCCCCCcceEEE-EECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE
Q psy14726 505 LNSCEVYDPECNQWTLIEPMRHRRSGVSCI-AYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI 583 (712)
Q Consensus 505 ~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 583 (712)
.+..||..+..-.....-.. .-.++. ..+++.++.||.+ ..+..||..+.+=..... ....-.+++..
T Consensus 247 --~i~i~d~~~~~~~~~~~~~~--~i~~v~~s~~g~~l~s~s~D-----g~i~iwd~~~~~~~~~~~--~~~~v~~~~~s 315 (337)
T d1gxra_ 247 --NVEVLHVNKPDKYQLHLHES--CVLSLKFAYCGKWFVSTGKD-----NLLNAWRTPYGASIFQSK--ESSSVLSCDIS 315 (337)
T ss_dssp --CEEEEETTSSCEEEECCCSS--CEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCEEEEEE--CSSCEEEEEEC
T ss_pred --cccccccccccccccccccc--ccceEEECCCCCEEEEEeCC-----CeEEEEECCCCCEEEEcc--CCCCEEEEEEe
Confidence 57888887766433321111 111222 2256667777654 467888877654222111 11111122222
Q ss_pred -CCEEEEEcccCC
Q psy14726 584 -DDMIFAIGGFNG 595 (712)
Q Consensus 584 -~~~i~v~GG~~~ 595 (712)
+++.++.||.++
T Consensus 316 ~d~~~l~t~s~D~ 328 (337)
T d1gxra_ 316 VDDKYIVTGSGDK 328 (337)
T ss_dssp TTSCEEEEEETTS
T ss_pred CCCCEEEEEeCCC
Confidence 677778888765
|
| >d1nexa2 d.42.1.1 (A:4-103) Centromere DNA-binding protein complex Cbf3 subunit D, CBF3D {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: POZ domain superfamily: POZ domain family: BTB/POZ domain domain: Centromere DNA-binding protein complex Cbf3 subunit D, CBF3D species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.68 E-value=0.0068 Score=44.30 Aligned_cols=60 Identities=20% Similarity=0.405 Sum_probs=45.1
Q ss_pred cEEEEecCCcEEeceeeeecccCHHHHHhhcCCCC----cCCccceEEcCCCCHHHHHHHhhhhcc
Q psy14726 94 DATIVLADNSHFPIHRNILCACSDYFRALFTTSLH----DQEKFSLVEIPGVDASVMTSLIEYAYL 155 (712)
Q Consensus 94 Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~----e~~~~~~i~l~~~~~~~f~~~l~~~Yt 155 (712)
-|+|+..||.+|.+-+.+ |..|...+.|+..... +... ..|.|++|+..+|+.+++|++.
T Consensus 2 ~I~L~SsDg~~F~v~~~~-a~~S~tIk~ml~~~~~~~~~~~~~-~~Ipl~~V~s~iL~kVieyc~~ 65 (72)
T d1nexa2 2 NVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDE-IVMPVPNVRSSVLQKVIEWAEH 65 (72)
T ss_dssp EEEEECTTSCEEEEEHHH-HTTSHHHHHTC--------------CEEECTTCCHHHHHHHHHHHHH
T ss_pred eeEEEeCCCCEEEecHHH-HHHHHHHHHHHHhcCccccccCCC-CcccCCCcCHHHHHHHHHHHHH
Confidence 478888899999999885 4569999999974322 2233 5799999999999999999954
|
| >d1pexa_ b.66.1.1 (A:) Collagenase-3 (MMP-13), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 4-bladed beta-propeller superfamily: Hemopexin-like domain family: Hemopexin-like domain domain: Collagenase-3 (MMP-13), C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.64 E-value=0.37 Score=42.34 Aligned_cols=145 Identities=10% Similarity=0.051 Sum_probs=83.5
Q ss_pred EEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEc------ccCCccccceeEEEE--CCEEEEEcccCCCCccCceE
Q psy14726 438 STAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI------APMNVERSDASATTL--QGKIYITGGFNGHNCLNSCE 509 (712)
Q Consensus 438 ~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~------~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~ 509 (712)
+++.++|.+|+|=| ..+|+++.....+... +.+|.. .. +|... ++++|++-| +.++
T Consensus 13 Av~~~~g~~y~Fkg-------~~~wr~~~~~~~~~p~~i~~~w~~lp~~-ID-AAf~~~~~~~~yffkg-------~~~w 76 (192)
T d1pexa_ 13 AITSLRGETMIFKD-------RFFWRLHPQQVDAELFLTKSFWPELPNR-ID-AAYEHPSHDLIFIFRG-------RKFW 76 (192)
T ss_dssp EEEEETTEEEEEET-------TEEEEECSSSSCCEEEEHHHHCTTSCSS-CC-EEEEETTTTEEEEEET-------TEEE
T ss_pred EEEEcCCeEEEEEC-------CEEEEEcCCCCCCcccchhhhCcCCCCc-cc-ceEEEcCCCEEEEEcC-------CEEE
Confidence 56778999999976 4567766554444321 234422 11 22233 688998877 4578
Q ss_pred EeeCCCCee---EEeCC--CCCCCcce-EEEE--ECCEEEEEcCCCCCCccceEEEEeCCCCcEEE-----c----CCCC
Q psy14726 510 VYDPECNQW---TLIEP--MRHRRSGV-SCIA--YHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQ-----V----PDMY 572 (712)
Q Consensus 510 ~yd~~~~~W---~~~~~--~p~~r~~~-~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-----~----~~~p 572 (712)
+|+..+..+ ..+.. +|.+.... +++. .++++|++-| +..++||..++.=.. + +.+|
T Consensus 77 ~y~~~~~~~gyPk~i~~~~~~~~~~~idaA~~~~~~~~~y~Fkg-------~~y~~y~~~~~~~~~~~pk~I~~~w~gvp 149 (192)
T d1pexa_ 77 ALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSG-------NQVWRYDDTNHIMDKDYPRLIEEDFPGIG 149 (192)
T ss_dssp EESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEET-------TEEEEEETTTTEECSSCCCBHHHHSTTSC
T ss_pred EEcCCcccCCCCeEeeeeecCCCCCCccEEEEECCCCEEEEEeC-------CEEEEEcCccccccCCCcEEHhhcCCCCC
Confidence 887654433 23332 22222222 2333 2589999987 567899887653211 1 1222
Q ss_pred CCccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeEEE
Q psy14726 573 NPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYE 614 (712)
Q Consensus 573 ~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 614 (712)
. +. .++...++++|+|-|. ..+.||..+.+=..
T Consensus 150 ~-~v-dAa~~~~g~~YfF~g~-------~y~r~~~~~~~v~~ 182 (192)
T d1pexa_ 150 D-KV-DAVYEKNGYIYFFNGP-------IQFEYSIWSNRIVR 182 (192)
T ss_dssp S-CC-SEEEEETTEEEEEETT-------EEEEEETTTTEEEE
T ss_pred C-Cc-eEEEEeCCEEEEEECC-------EEEEEeCCcCeEcc
Confidence 2 22 2444669999999663 67899988766443
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=95.61 E-value=0.67 Score=44.22 Aligned_cols=234 Identities=9% Similarity=-0.039 Sum_probs=117.6
Q ss_pred CceEEEEeecC--CCCCCceEEEEECCCCcEEEcccCCCCC-CCcceEEEEE--CCEEEEEeecCCCCccceEEEEECCC
Q psy14726 347 HEILFAIGGWS--GGSPTDFVETYDTRADRWVKIEQVDPMG-PRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVT 421 (712)
Q Consensus 347 ~~~i~~~GG~~--~~~~~~~v~~~d~~~~~W~~~~~~~~~~-~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~ 421 (712)
.+.+|+..... ...+...|..+|+.++.+.......... .-..+++++. ++.+|+..+. +.+.++|+..
T Consensus 28 dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~l~vad~~------~~i~~~~~~g 101 (314)
T d1pjxa_ 28 NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR------LGLLVVQTDG 101 (314)
T ss_dssp TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT------TEEEEEETTS
T ss_pred CCCEEEEECccccccccCCEEEEEECCCCcEEEEECCccccCCCcceeEEEeCCCCEEEEEECC------CeEEEEeCCC
Confidence 34566643221 1123456899999999877643221111 1123455554 4567776542 4588999987
Q ss_pred CcEEEeCCCCCCc---c-eeEEEEECCeEEEEc--ccC--------CCCCCceeEEeecCCCceEEc-ccCCccccceeE
Q psy14726 422 KVWKEIAPMNFKR---C-YVSTAVHHDVIYAMG--GYN--------GQRRQNSVEKYNYTENQWSLI-APMNVERSDASA 486 (712)
Q Consensus 422 ~~W~~~~~~~~~r---~-~~~~~~~~~~iyv~G--G~~--------~~~~~~~v~~yd~~~~~W~~~-~~~p~~r~~~~~ 486 (712)
.....+......+ . +-..+--+|.||+.. |.. .......++++++.. ++..+ ..+..+ -+.
T Consensus 102 ~~~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~dg-~~~~~~~~~~~p---NGi 177 (314)
T d1pjxa_ 102 TFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDG-QMIQVDTAFQFP---NGI 177 (314)
T ss_dssp CEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTS-CEEEEEEEESSE---EEE
T ss_pred cEEEEEeccccccccCCCcEEEECCCCCEEEecCccCcccccccceeccCCceEEEEeecC-ceeEeeCCccee---eee
Confidence 7665543332222 1 223333468999862 211 112245788998764 34443 222222 122
Q ss_pred EE-ECC-----EEEEEcccCCCCccCceEEeeCCCCe---eEE-eCCCCCCCc-ce-EEEE-ECCEEEEEcCCCCCCccc
Q psy14726 487 TT-LQG-----KIYITGGFNGHNCLNSCEVYDPECNQ---WTL-IEPMRHRRS-GV-SCIA-YHECIYVIGGFNGMSRMC 553 (712)
Q Consensus 487 ~~-~~~-----~iyv~GG~~~~~~~~~v~~yd~~~~~---W~~-~~~~p~~r~-~~-~~~~-~~~~iyv~GG~~~~~~~~ 553 (712)
+. -++ .+|+... ....+++||...+. +.. ...++.... .. ++++ -+|.|||..-. ..
T Consensus 178 ~~~~d~d~~~~~lyv~d~-----~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~-----~g 247 (314)
T d1pjxa_ 178 AVRHMNDGRPYQLIVAET-----PTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWG-----SS 247 (314)
T ss_dssp EEEECTTSCEEEEEEEET-----TTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEET-----TT
T ss_pred EECCCCCcceeEEEEEee-----cccceEEeeccCccccceeeEEEEccccccccceeeEEecCCcEEEEEcC-----CC
Confidence 22 222 5887643 23578888754331 221 222332211 22 3333 26889987421 36
Q ss_pred eEEEEeCCCCcEEEcCCCCCCccceEEEEEC---CEEEEEcccCCCceeeeEEEEEC
Q psy14726 554 NGEKYNPVTKTWSQVPDMYNPRSNFAIEVID---DMIFAIGGFNGVTTIYHVECYDE 607 (712)
Q Consensus 554 ~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~---~~i~v~GG~~~~~~~~~v~~yd~ 607 (712)
.|.+|||+..+....-..|.+ ..+.+.++ +.|||....+ ..++.++.
T Consensus 248 ~I~~~dp~~g~~~~~i~~p~~--~~t~~afg~d~~~lyVt~~~~-----g~i~~~~~ 297 (314)
T d1pjxa_ 248 HIEVFGPDGGQPKMRIRCPFE--KPSNLHFKPQTKTIFVTEHEN-----NAVWKFEW 297 (314)
T ss_dssp EEEEECTTCBSCSEEEECSSS--CEEEEEECTTSSEEEEEETTT-----TEEEEEEC
T ss_pred EEEEEeCCCCEEEEEEECCCC--CEEEEEEeCCCCEEEEEECCC-----CcEEEEEC
Confidence 899999987653322122322 22333442 3588864432 25677664
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=95.53 E-value=0.96 Score=42.06 Aligned_cols=196 Identities=11% Similarity=0.063 Sum_probs=105.9
Q ss_pred eEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCC----CCcceeEEEEEC--CeEEE-EcccCCCCCCcee
Q psy14726 390 HGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMN----FKRCYVSTAVHH--DVIYA-MGGYNGQRRQNSV 461 (712)
Q Consensus 390 ~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~----~~r~~~~~~~~~--~~iyv-~GG~~~~~~~~~v 461 (712)
+++++- ++.|||.-.. ...+.+||+..+--...+... ........+..+ +..++ ..+ ....+
T Consensus 26 ~gvavd~dg~i~VaD~~-----n~rI~v~d~~G~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-----~~~~i 95 (279)
T d1q7fa_ 26 SGVAVNAQNDIIVADTN-----NHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS-----PTHQI 95 (279)
T ss_dssp EEEEECTTCCEEEEEGG-----GTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG-----GGCEE
T ss_pred cEEEEcCCCCEEEEECC-----CCEEEEEeCCCCEEEEecccCCCcccccccccccccccccccceeccC-----Ccccc
Confidence 455554 6789988542 356899997643222332211 122233444442 33333 222 12467
Q ss_pred EEeecCCCceEEcccCCccccceeEEEE-CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CCE
Q psy14726 462 EKYNYTENQWSLIAPMNVERSDASATTL-QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HEC 539 (712)
Q Consensus 462 ~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~ 539 (712)
..+++....+....... ....++.++- ++.+|+..... ..+.+||+....-..+...........+++- ++.
T Consensus 96 ~~~~~~g~~~~~~~~~~-~~~p~~~avd~~G~i~v~~~~~-----~~~~~~~~~g~~~~~~g~~~~~~~~~~i~~d~~g~ 169 (279)
T d1q7fa_ 96 QIYNQYGQFVRKFGATI-LQHPRGVTVDNKGRIIVVECKV-----MRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQE 169 (279)
T ss_dssp EEECTTSCEEEEECTTT-CSCEEEEEECTTSCEEEEETTT-----TEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSE
T ss_pred ccccccccceeecCCCc-ccccceeccccCCcEEEEeecc-----ceeeEeccCCceeecccccccccccceeeecccee
Confidence 88888777666553221 1112223322 57888876532 4578899877665555432222223333333 578
Q ss_pred EEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCC
Q psy14726 540 IYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTD 610 (712)
Q Consensus 540 iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~ 610 (712)
||+.... ...+++||+.......++.......-.++++- ++.|||....+. ..+.+|+++..
T Consensus 170 i~v~d~~-----~~~V~~~d~~G~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~----~~v~~f~~~G~ 232 (279)
T d1q7fa_ 170 IFISDNR-----AHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNN----FNLTIFTQDGQ 232 (279)
T ss_dssp EEEEEGG-----GTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSS----CEEEEECTTSC
T ss_pred EEeeecc-----ccceeeeecCCceeeeecccccccCCcccccccCCeEEEEECCCC----cEEEEECCCCC
Confidence 9998764 46799999987766666432222222344432 678998743322 24788987643
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=95.45 E-value=0.48 Score=44.71 Aligned_cols=104 Identities=9% Similarity=0.148 Sum_probs=56.4
Q ss_pred CEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCcEEEc
Q psy14726 491 GKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQV 568 (712)
Q Consensus 491 ~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 568 (712)
+.+++.|+.+ ..+..||..+.+-... +........++.+ ++.+++.|+.+ ..+..||.........
T Consensus 196 ~~~~~~~~~d-----~~v~i~d~~~~~~~~~--~~~h~~~i~~v~~~p~~~~l~s~s~d-----~~i~~~~~~~~~~~~~ 263 (340)
T d1tbga_ 196 TRLFVSGACD-----ASAKLWDVREGMCRQT--FTGHESDINAICFFPNGNAFATGSDD-----ATCRLFDLRADQELMT 263 (340)
T ss_dssp SSEEEEEETT-----TEEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEE
T ss_pred cceeEEeecC-----ceEEEEECCCCcEEEE--EeCCCCCeEEEEECCCCCEEEEEeCC-----CeEEEEeecccccccc
Confidence 3445555433 3577888877653222 1111122222222 56677777654 4577888887665443
Q ss_pred CCCCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 569 PDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 569 ~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
-...........+.+ ++.+++.|+.++ .+.+||..+.+
T Consensus 264 ~~~~~~~~~i~~~~~s~~~~~l~~g~~dg-----~i~iwd~~~~~ 303 (340)
T d1tbga_ 264 YSHDNIICGITSVSFSKSGRLLLAGYDDF-----NCNVWDALKAD 303 (340)
T ss_dssp ECCTTCCSCEEEEEECSSSCEEEEEETTS-----CEEEEETTTCC
T ss_pred cccccccCceEEEEECCCCCEEEEEECCC-----EEEEEECCCCc
Confidence 222222222333333 677888888765 57889987654
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=95.38 E-value=1.9 Score=44.67 Aligned_cols=118 Identities=14% Similarity=0.183 Sum_probs=74.9
Q ss_pred EEEECCEEEEEeecCCCCccceEEEEECCCCc--EEEeCCCCC--------CcceeEEEEECCeEEEEcccCCCCCCcee
Q psy14726 392 TAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKV--WKEIAPMNF--------KRCYVSTAVHHDVIYAMGGYNGQRRQNSV 461 (712)
Q Consensus 392 ~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~~~--------~r~~~~~~~~~~~iyv~GG~~~~~~~~~v 461 (712)
=++.++.||+..+ ...++.+|..|++ |+.-+..+. .......+..+++||+.... ..+
T Consensus 62 Piv~~g~vyv~t~------~~~v~AlDa~tG~~lW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~------g~l 129 (560)
T d1kv9a2 62 PLFHDGVIYTSMS------WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLD------GRL 129 (560)
T ss_dssp CEEETTEEEEEEG------GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTT------SEE
T ss_pred CEEECCEEEEECC------CCeEEEEeCCCCCEEEEECCCCCccccccccccccccCcceeCCeEEEEeCC------CEE
Confidence 3567999998765 3579999999886 875433221 12234566778888886431 468
Q ss_pred EEeecCCCc--eEEcccCC--ccccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCe--eEEe
Q psy14726 462 EKYNYTENQ--WSLIAPMN--VERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQ--WTLI 521 (712)
Q Consensus 462 ~~yd~~~~~--W~~~~~~p--~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~ 521 (712)
+.+|..+.+ |+....-+ ......+-.++++.+++-+..........+..||.+|++ |+.-
T Consensus 130 ~Alda~tG~~~w~~~~~~~~~~~~~~~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~ 195 (560)
T d1kv9a2 130 IALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (560)
T ss_dssp EEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEECCCCcEEeccCccCcccceeeeeeeeeecCcccccccceeccccceEEEEECCCceEEeeee
Confidence 889988864 76543222 222233456678888874433333344579999999987 7654
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.35 E-value=0.55 Score=45.59 Aligned_cols=225 Identities=12% Similarity=0.111 Sum_probs=104.7
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEE
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 426 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 426 (712)
+..++.|+.+ ..+..+|...++....... . ...-.++... ++...+.|+.+ ..+..+|..+..-..
T Consensus 133 ~~~l~s~~~d-----g~v~i~~~~~~~~~~~~~~--h-~~~v~~~~~~~~~~~~~~~~~~-----~~i~~~d~~~~~~~~ 199 (388)
T d1erja_ 133 GKFLATGAED-----RLIRIWDIENRKIVMILQG--H-EQDIYSLDYFPSGDKLVSGSGD-----RTVRIWDLRTGQCSL 199 (388)
T ss_dssp SSEEEEEETT-----SCEEEEETTTTEEEEEECC--C-SSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEE
T ss_pred CCcceecccc-----ccccccccccccccccccc--c-cccccccccccccccccccccc-----eeeeeeecccccccc
Confidence 3455666643 2477888887776653211 1 1111122222 44455555532 457888888776544
Q ss_pred eCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEc-ccCCccc----cceeEEEE--CCEEEEEccc
Q psy14726 427 IAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI-APMNVER----SDASATTL--QGKIYITGGF 499 (712)
Q Consensus 427 ~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~p~~r----~~~~~~~~--~~~iyv~GG~ 499 (712)
................++.+++.|+.+ ..+..||..+...... ....... ..-..+.+ +++.++.|+.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~l~~~~~d-----~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~ 274 (388)
T d1erja_ 200 TLSIEDGVTTVAVSPGDGKYIAAGSLD-----RAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSL 274 (388)
T ss_dssp EEECSSCEEEEEECSTTCCEEEEEETT-----SCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEET
T ss_pred ccccccccccccccCCCCCeEEEEcCC-----CeEEEeecccCccceeeccccccccCCCCCEEEEEECCCCCEEEEEEC
Confidence 333222221111111256777777754 3588888887765432 1111111 11122222 5667777775
Q ss_pred CCCCccCceEEeeCCCCeeEEeCCCCC----------CCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCcEEE
Q psy14726 500 NGHNCLNSCEVYDPECNQWTLIEPMRH----------RRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQ 567 (712)
Q Consensus 500 ~~~~~~~~v~~yd~~~~~W~~~~~~p~----------~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 567 (712)
++ .+..||..+.........+. .......+.. ++.+++.|+.+ ..|..||..+.+-..
T Consensus 275 d~-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~d-----g~i~vwd~~~~~~~~ 344 (388)
T d1erja_ 275 DR-----SVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKD-----RGVLFWDKKSGNPLL 344 (388)
T ss_dssp TS-----EEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETT-----SEEEEEETTTCCEEE
T ss_pred CC-----cEEEEeccCCccccccccccccceeeecccccceEEEEEECCCCCEEEEEeCC-----CEEEEEECCCCcEEE
Confidence 53 56777766544322111110 0111122222 56666777654 468899988765332
Q ss_pred cCCCCCCccc-eEEEEE-------CCEEEEEcccCCCceeeeEEEEEC
Q psy14726 568 VPDMYNPRSN-FAIEVI-------DDMIFAIGGFNGVTTIYHVECYDE 607 (712)
Q Consensus 568 ~~~~p~~r~~-~~~~~~-------~~~i~v~GG~~~~~~~~~v~~yd~ 607 (712)
. +...... .+++.. ++.+++.||.++ .|.+||.
T Consensus 345 ~--l~~H~~~V~~~~~~~~~~~spd~~~l~s~s~Dg-----~I~iW~~ 385 (388)
T d1erja_ 345 M--LQGHRNSVISVAVANGSSLGPEYNVFATGSGDC-----KARIWKY 385 (388)
T ss_dssp E--EECCSSCEEEEEECSSCTTCTTCEEEEEEETTS-----EEEEEEE
T ss_pred E--EeCCCCCEEEEEEecCcccCCCCCEEEEEeCCC-----EEEEEee
Confidence 1 1111111 122221 577888888765 3455553
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=95.16 E-value=0.27 Score=46.57 Aligned_cols=58 Identities=21% Similarity=-0.014 Sum_probs=34.7
Q ss_pred ceEEEEECCCCcEEE-cccCCCCCCCcceEEEEE-C-CEEEEEeecCCCCccceEEEEECCCCcEEEe
Q psy14726 363 DFVETYDTRADRWVK-IEQVDPMGPRAYHGTAVI-G-YNIYVIGGFDGNEYYNSCRCFNAVTKVWKEI 427 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~-~~~~~~~~~r~~~~~~~~-~-~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 427 (712)
+.|.++|..+.+-.. ++.... ...-.++++. + ..+|+.|+.+ ..+..||..+++....
T Consensus 11 ~~v~v~D~~s~~~~~~i~~~~~--~~~~~~i~~spDg~~l~v~~~~~-----~~v~v~D~~t~~~~~~ 71 (337)
T d1pbyb_ 11 DKLVVIDTEKMAVDKVITIADA--GPTPMVPMVAPGGRIAYATVNKS-----ESLVKIDLVTGETLGR 71 (337)
T ss_dssp TEEEEEETTTTEEEEEEECTTC--TTCCCCEEECTTSSEEEEEETTT-----TEEEEEETTTCCEEEE
T ss_pred CEEEEEECCCCeEEEEEECCCC--CCCccEEEECCCCCEEEEEECCC-----CeEEEEECCCCcEEEE
Confidence 578899999877543 221111 1222334444 4 4677876532 4699999999887543
|
| >d1itva_ b.66.1.1 (A:) Gelatinase B (MMP-9) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 4-bladed beta-propeller superfamily: Hemopexin-like domain family: Hemopexin-like domain domain: Gelatinase B (MMP-9) species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.05 E-value=0.35 Score=42.62 Aligned_cols=142 Identities=11% Similarity=0.110 Sum_probs=80.5
Q ss_pred EEEEECCEEEEEeecCCCCccceEEEEECCCCcEEE----e----CCCCCCcceeEEEE-ECCeEEEEcccCCCCCCcee
Q psy14726 391 GTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE----I----APMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSV 461 (712)
Q Consensus 391 ~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~----~----~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v 461 (712)
+++.++|.+|+|-| ..+|+|+........ + +.+|.. -..+... .++++|+|-| +.+
T Consensus 11 Av~~~~G~~y~Fkg-------~~ywr~~~~~~~~~~~P~~I~~~w~glp~~-IDAAf~~~~~~k~yfFkg-------~~~ 75 (195)
T d1itva_ 11 AIAEIGNQLYLFKD-------GKYWRFSEGRGSRPQGPFLIADKWPALPRK-LDSVFEEPLSKKLFFFSG-------RQV 75 (195)
T ss_dssp EEEEETTEEEEEET-------TEEEEECCSSSCCCEEEEEHHHHCTTSCSS-CSEEEECTTTCCEEEEET-------TEE
T ss_pred eEEEeCCEEEEEEC-------CEEEEEeCCCCCcCCCcEEeeeecCCCCCC-ccEEEEECCCCEEEEEec-------CEE
Confidence 45667999999977 456777654333211 1 334432 1112112 3578999866 467
Q ss_pred EEeecCCCce-EEccc--CCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEE-----e----CCCCCC
Q psy14726 462 EKYNYTENQW-SLIAP--MNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTL-----I----EPMRHR 527 (712)
Q Consensus 462 ~~yd~~~~~W-~~~~~--~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-----~----~~~p~~ 527 (712)
|+|+-.+-.. ..+.. +|..-..-.++.. ++++|++=| +..++||..+++-.. + +.+|.
T Consensus 76 ~~y~~~~~~~Pk~i~~~g~p~~~~~idaa~~~~~g~~Y~FkG-------~~y~ryd~~~~~v~~gyPk~i~~~w~gvp~- 147 (195)
T d1itva_ 76 WVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSG-------RRLWRFDVKAQMVDPRSASEVDRMFPGVPL- 147 (195)
T ss_dssp EEEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEET-------TEEEEEETTTTEECGGGCEEHHHHSTTSCS-
T ss_pred EEEcCccccCCEEhhhcCCCCCchheeeEEEcCCCeEEEEec-------cEEEEEeCCcccccCCCccchhhhcCCCCC-
Confidence 8886322111 12222 2322222233333 689999976 468999988775221 1 12332
Q ss_pred CcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCC
Q psy14726 528 RSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTK 563 (712)
Q Consensus 528 r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~ 563 (712)
.-.++...++.+|++-| ...++||..+.
T Consensus 148 -~idaAf~~~~~~Yffkg-------~~y~r~~~~~~ 175 (195)
T d1itva_ 148 -DTHDVFQFREKAYFCQD-------RFYWRVSSRSE 175 (195)
T ss_dssp -SCSEEEEETTEEEEEET-------TEEEEEECCTT
T ss_pred -CCcEEEEeCCcEEEEEC-------CEEEEEcCCce
Confidence 34456667999999987 46788887654
|
| >d1su3a2 b.66.1.1 (A:271-465) Collagenase (MMP1), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 4-bladed beta-propeller superfamily: Hemopexin-like domain family: Hemopexin-like domain domain: Collagenase (MMP1), C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.96 E-value=0.33 Score=42.77 Aligned_cols=145 Identities=11% Similarity=0.064 Sum_probs=82.6
Q ss_pred EEEEECCeEEEEcccCCCCCCceeEEeecCCCceEE--c----ccCCccccceeEEEE--CCEEEEEcccCCCCccCceE
Q psy14726 438 STAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSL--I----APMNVERSDASATTL--QGKIYITGGFNGHNCLNSCE 509 (712)
Q Consensus 438 ~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~--~----~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~ 509 (712)
+++..+|.+|+|-| ..+|+++........ + +.+|..- -+|... ++++|++-| +..+
T Consensus 16 Av~~~~G~~y~Fkg-------~~~wr~~~~~~~~~p~~i~~~w~glp~~I--DAAf~~~~~~~~yfFkG-------~~y~ 79 (195)
T d1su3a2 16 AITTIRGEVMFFKD-------RFYMRTNPFYPEVELNFISVFWPQLPNGL--EAAYEFADRDEVRFFKG-------NKYW 79 (195)
T ss_dssp EEEEETTEEEEEET-------TEEEECCTTSSSCEEEEGGGTCTTSCSSC--CEEEEEGGGTEEEEEET-------TEEE
T ss_pred EEEEcCCeEEEEeC-------CEEEEeeCCCCccCccchHhhCcCCCCcc--cceEEecCCcEEEEECC-------cEEE
Confidence 56778999999977 345555544443321 1 2233322 133333 589999988 5678
Q ss_pred EeeCCCCe---eEEeC---CCCCCCcce-EEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCcEEE-----c----CCC
Q psy14726 510 VYDPECNQ---WTLIE---PMRHRRSGV-SCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQ-----V----PDM 571 (712)
Q Consensus 510 ~yd~~~~~---W~~~~---~~p~~r~~~-~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-----~----~~~ 571 (712)
+|+..+.. -..+. .+|...... ++... ++++|++-| +..++||..+++=.. + +.+
T Consensus 80 ~y~~~~~~~g~p~~i~~~~G~p~~~~~idaa~~~~~~~~~Y~FkG-------~~y~ry~~~~~~vd~gyPk~I~~~w~Gv 152 (195)
T d1su3a2 80 AVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVA-------NKYWRYDEYKRSMDPGYPKMIAHDFPGI 152 (195)
T ss_dssp EEETTEECTTCSEEHHHHHCCCTTCCCCCEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCSEEHHHHSTTS
T ss_pred EEcCCccccCCCccchhhcCCCCCccccccccccCCCCeEEEEeC-------CEEEEEeccCccccCCcccccccccCCC
Confidence 88743221 11221 133222222 22222 579999988 578999988764211 1 122
Q ss_pred CCCccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeEEE
Q psy14726 572 YNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYE 614 (712)
Q Consensus 572 p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 614 (712)
|. .--++...++++|++-|. ..+.||+.+.+-..
T Consensus 153 p~--~iDAAf~~~g~~YfFkg~-------~y~r~~~~~~~v~~ 186 (195)
T d1su3a2 153 GH--KVDAVFMKDGFFYFFHGT-------RQYKFDPKTKRILT 186 (195)
T ss_dssp CS--CCSEEEEETTEEEEEETT-------EEEEEETTTTEEEE
T ss_pred CC--CccEEEEECCeEEEEECC-------EEEEEeCCcCEEEe
Confidence 32 223445669999999763 67999988766433
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=94.94 E-value=0.25 Score=47.14 Aligned_cols=154 Identities=12% Similarity=0.080 Sum_probs=76.9
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-C-CEEEEEeecCCCCccceEEEEECCCCcEE
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-G-YNIYVIGGFDGNEYYNSCRCFNAVTKVWK 425 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~-~~lyv~GG~~~~~~~~~v~~yd~~~~~W~ 425 (712)
+..+++|+. .+.|..+|..+++-.. ....+....-.++++. + ..+|+.+..+ +.+..||..+.+=.
T Consensus 8 ~~~l~~~~~-----~~~v~v~D~~t~~~~~--t~~~~~~~~p~~l~~spDG~~l~v~~~~~-----~~v~~~d~~t~~~~ 75 (346)
T d1jmxb_ 8 HEYMIVTNY-----PNNLHVVDVASDTVYK--SCVMPDKFGPGTAMMAPDNRTAYVLNNHY-----GDIYGIDLDTCKNT 75 (346)
T ss_dssp CEEEEEEET-----TTEEEEEETTTTEEEE--EEECSSCCSSCEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEE
T ss_pred CcEEEEEcC-----CCEEEEEECCCCCEEE--EEEcCCCCCcceEEECCCCCEEEEEECCC-----CcEEEEeCccCeee
Confidence 344555653 3478999999987543 2223323333455554 4 4677776532 56899999988644
Q ss_pred EeCCCCCCc-----ceeEEEE-ECC-eEEEEcccCC------CCCCceeEEeecCCCceEE-cccCCccccceeE-EEEC
Q psy14726 426 EIAPMNFKR-----CYVSTAV-HHD-VIYAMGGYNG------QRRQNSVEKYNYTENQWSL-IAPMNVERSDASA-TTLQ 490 (712)
Q Consensus 426 ~~~~~~~~r-----~~~~~~~-~~~-~iyv~GG~~~------~~~~~~v~~yd~~~~~W~~-~~~~p~~r~~~~~-~~~~ 490 (712)
......... ...+++. -+| .+|+.+.... ......+..+|..+.+-.. +...+.+.....+ ..-+
T Consensus 76 ~~~~~~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (346)
T d1jmxb_ 76 FHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADD 155 (346)
T ss_dssp EEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTT
T ss_pred eeecccccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeeeccCceEEEEecCC
Confidence 322222111 1122333 233 6666653221 0123456677776654221 1111122222222 2236
Q ss_pred CEEEEEcccCCCCccCceEEeeCCCCeeEEe
Q psy14726 491 GKIYITGGFNGHNCLNSCEVYDPECNQWTLI 521 (712)
Q Consensus 491 ~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 521 (712)
+++|+.++ .+..+|..+.++...
T Consensus 156 ~~~~~~~~--------~~~~~~~~~~~~~~~ 178 (346)
T d1jmxb_ 156 GSLYVAGP--------DIYKMDVKTGKYTVA 178 (346)
T ss_dssp SCEEEESS--------SEEEECTTTCCEEEE
T ss_pred CEEEEeCC--------cceEEEccCCCEEEE
Confidence 67887763 356667766665443
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=94.90 E-value=0.69 Score=44.18 Aligned_cols=208 Identities=9% Similarity=-0.021 Sum_probs=111.2
Q ss_pred EEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEe-CCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecC
Q psy14726 391 GTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEI-APMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYT 467 (712)
Q Consensus 391 ~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~ 467 (712)
+.++. ++.||+..- ....++++||.++..... .+.. ..-++++. -+|++||+.-. +......+..+++.
T Consensus 44 G~~~D~~G~Ly~~D~-----~~g~I~ri~p~g~~~~~~~~~~~--~~p~gla~~~dG~l~va~~~-~~~~~~~i~~~~~~ 115 (319)
T d2dg1a1 44 GLNFDRQGQLFLLDV-----FEGNIFKINPETKEIKRPFVSHK--ANPAAIKIHKDGRLFVCYLG-DFKSTGGIFAATEN 115 (319)
T ss_dssp EEEECTTSCEEEEET-----TTCEEEEECTTTCCEEEEEECSS--SSEEEEEECTTSCEEEEECT-TSSSCCEEEEECTT
T ss_pred eCEECCCCCEEEEEC-----CCCEEEEEECCCCeEEEEEeCCC--CCeeEEEECCCCCEEEEecC-CCccceeEEEEcCC
Confidence 33443 566888742 235689999998865443 2222 12345554 36799987321 11234568888888
Q ss_pred CCceEEcccCCccccceeEEEE--CCEEEEEcccCC-CCccCceEEeeCCCCeeEEeC-CCCCCCcceEEEEE--CCEEE
Q psy14726 468 ENQWSLIAPMNVERSDASATTL--QGKIYITGGFNG-HNCLNSCEVYDPECNQWTLIE-PMRHRRSGVSCIAY--HECIY 541 (712)
Q Consensus 468 ~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~-~~~~~~v~~yd~~~~~W~~~~-~~p~~r~~~~~~~~--~~~iy 541 (712)
+........-........-..+ +|.+|+..-... ......++++++....++.+. .+..| .+++.- ++.||
T Consensus 116 ~~~~~~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~~~~~~~~~~~p---nGia~s~dg~~ly 192 (319)
T d2dg1a1 116 GDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVA---NGIALSTDEKVLW 192 (319)
T ss_dssp SCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSE---EEEEECTTSSEEE
T ss_pred CceeeeeccCCCcccCCcceeEEeccceeecccccccccCcceeEEEecccceeEEEeecccee---eeeeeccccceEE
Confidence 8776554332222222222233 788888532211 233567899999887776653 22222 223332 34688
Q ss_pred EEcCCCCCCccceEEEEeCCCCc---E---EEcC-CCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCeEE
Q psy14726 542 VIGGFNGMSRMCNGEKYNPVTKT---W---SQVP-DMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEWY 613 (712)
Q Consensus 542 v~GG~~~~~~~~~v~~yd~~~~~---W---~~~~-~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 613 (712)
+.-- ..+.+++||...+. + .... .......--++++- +|.|||..-.+ ..|.+|||+...-.
T Consensus 193 vad~-----~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~-----g~V~~~~p~G~~l~ 262 (319)
T d2dg1a1 193 VTET-----TANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQ-----GRVLVFNKRGYPIG 262 (319)
T ss_dssp EEEG-----GGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETT-----TEEEEECTTSCEEE
T ss_pred Eecc-----cCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCC-----CEEEEECCCCcEEE
Confidence 8743 24678999865431 1 1111 11111112344443 78899873221 26899999765444
Q ss_pred EccCCCC
Q psy14726 614 EATDMNI 620 (712)
Q Consensus 614 ~~~~~p~ 620 (712)
.+ .+|.
T Consensus 263 ~i-~~P~ 268 (319)
T d2dg1a1 263 QI-LIPG 268 (319)
T ss_dssp EE-ECTT
T ss_pred EE-eCCC
Confidence 44 3443
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=94.89 E-value=0.4 Score=45.88 Aligned_cols=198 Identities=8% Similarity=0.025 Sum_probs=103.5
Q ss_pred CCEEEEEeecC--CCCccceEEEEECCCCcEEEeCCCCCC---cceeEEEEE--CCeEEEEcccCCCCCCceeEEeecCC
Q psy14726 396 GYNIYVIGGFD--GNEYYNSCRCFNAVTKVWKEIAPMNFK---RCYVSTAVH--HDVIYAMGGYNGQRRQNSVEKYNYTE 468 (712)
Q Consensus 396 ~~~lyv~GG~~--~~~~~~~v~~yd~~~~~W~~~~~~~~~---r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~ 468 (712)
++.+|+..... .......++++|+.++.+......... -..+++++- ++.+|+..+. +.+.++|+.+
T Consensus 28 dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~l~vad~~------~~i~~~~~~g 101 (314)
T d1pjxa_ 28 NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR------LGLLVVQTDG 101 (314)
T ss_dssp TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT------TEEEEEETTS
T ss_pred CCCEEEEECccccccccCCEEEEEECCCCcEEEEECCccccCCCcceeEEEeCCCCEEEEEECC------CeEEEEeCCC
Confidence 66788764321 111235699999999988765432211 112344443 3467776542 4588999988
Q ss_pred CceEEcccCCcccc--ceeEEEE--CCEEEEEc--ccCC--------CCccCceEEeeCCCCeeEEeC-CCCCCCcceEE
Q psy14726 469 NQWSLIAPMNVERS--DASATTL--QGKIYITG--GFNG--------HNCLNSCEVYDPECNQWTLIE-PMRHRRSGVSC 533 (712)
Q Consensus 469 ~~W~~~~~~p~~r~--~~~~~~~--~~~iyv~G--G~~~--------~~~~~~v~~yd~~~~~W~~~~-~~p~~r~~~~~ 533 (712)
.....+.....++. ...-..+ +|.||+.. |... ......+++++++. ++..+. .+..| .+.
T Consensus 102 ~~~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~dg-~~~~~~~~~~~p---NGi 177 (314)
T d1pjxa_ 102 TFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDG-QMIQVDTAFQFP---NGI 177 (314)
T ss_dssp CEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTS-CEEEEEEEESSE---EEE
T ss_pred cEEEEEeccccccccCCCcEEEECCCCCEEEecCccCcccccccceeccCCceEEEEeecC-ceeEeeCCccee---eee
Confidence 76655433332221 1111223 68999863 2110 12345688898854 344443 22222 122
Q ss_pred EE-EC-C----EEEEEcCCCCCCccceEEEEeCCCCc---EEEc-CCCCCCc-cc-eEEEE-ECCEEEEEcccCCCceee
Q psy14726 534 IA-YH-E----CIYVIGGFNGMSRMCNGEKYNPVTKT---WSQV-PDMYNPR-SN-FAIEV-IDDMIFAIGGFNGVTTIY 600 (712)
Q Consensus 534 ~~-~~-~----~iyv~GG~~~~~~~~~v~~yd~~~~~---W~~~-~~~p~~r-~~-~~~~~-~~~~i~v~GG~~~~~~~~ 600 (712)
+. -+ + .||+..-. ...+++||...+. +..+ ..++... .. -++++ -+|.||+..-. .+
T Consensus 178 ~~~~d~d~~~~~lyv~d~~-----~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~-----~g 247 (314)
T d1pjxa_ 178 AVRHMNDGRPYQLIVAETP-----TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWG-----SS 247 (314)
T ss_dssp EEEECTTSCEEEEEEEETT-----TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEET-----TT
T ss_pred EECCCCCcceeEEEEEeec-----ccceEEeeccCccccceeeEEEEccccccccceeeEEecCCcEEEEEcC-----CC
Confidence 22 22 2 58876432 4678888864331 2221 2222211 11 23433 27889987321 13
Q ss_pred eEEEEECCCCeEE
Q psy14726 601 HVECYDEKTDEWY 613 (712)
Q Consensus 601 ~v~~yd~~~~~W~ 613 (712)
.|.+|||+++...
T Consensus 248 ~I~~~dp~~g~~~ 260 (314)
T d1pjxa_ 248 HIEVFGPDGGQPK 260 (314)
T ss_dssp EEEEECTTCBSCS
T ss_pred EEEEEeCCCCEEE
Confidence 6999999987643
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=94.59 E-value=0.53 Score=43.87 Aligned_cols=144 Identities=10% Similarity=0.173 Sum_probs=77.6
Q ss_pred CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEE
Q psy14726 443 HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTL 520 (712)
Q Consensus 443 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 520 (712)
++++++.|+.+ ..+..||..+.+...+....... .-.++.+ +++.++.|+.++ .+..||..++....
T Consensus 147 ~~~~l~~g~~d-----g~i~~~d~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~~d~-----~i~~~~~~~~~~~~ 215 (299)
T d1nr0a2 147 DKQFVAVGGQD-----SKVHVYKLSGASVSEVKTIVHPA-EITSVAFSNNGAFLVATDQSR-----KVIPYSVANNFELA 215 (299)
T ss_dssp TSCEEEEEETT-----SEEEEEEEETTEEEEEEEEECSS-CEEEEEECTTSSEEEEEETTS-----CEEEEEGGGTTEES
T ss_pred ccccccccccc-----ccccccccccccccccccccccc-ccccccccccccccccccccc-----cccccccccccccc
Confidence 56777787754 46888998887765543322211 1122233 556666676553 58888887765432
Q ss_pred e-CCCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcC-CCCCCccc-eEEEEECCEEEEEcccCC
Q psy14726 521 I-EPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVP-DMYNPRSN-FAIEVIDDMIFAIGGFNG 595 (712)
Q Consensus 521 ~-~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~-~~p~~r~~-~~~~~~~~~i~v~GG~~~ 595 (712)
. ..+........++.+ ++.+++.||.+ ..+..||..+.....+. ........ ..++..++..++.||.++
T Consensus 216 ~~~~~~~h~~~v~~l~~s~~~~~l~sgs~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~s~D~ 290 (299)
T d1nr0a2 216 HTNSWTFHTAKVACVSWSPDNVRLATGSLD-----NSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDS 290 (299)
T ss_dssp CCCCCCCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEETTEEEEEETTS
T ss_pred ccccccccccccccccccccccceEEEcCC-----CEEEEEECCCCCcceEEEecCCCCCcEEEEEECCCCEEEEEeCCC
Confidence 2 222222222222222 66777778765 46888998765433221 11111111 223334666777788765
Q ss_pred CceeeeEEEEEC
Q psy14726 596 VTTIYHVECYDE 607 (712)
Q Consensus 596 ~~~~~~v~~yd~ 607 (712)
.+.+||.
T Consensus 291 -----~i~iWdl 297 (299)
T d1nr0a2 291 -----NIKFWNV 297 (299)
T ss_dssp -----CEEEEEC
T ss_pred -----EEEEEec
Confidence 4556654
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=94.59 E-value=1.9 Score=40.43 Aligned_cols=209 Identities=9% Similarity=-0.062 Sum_probs=112.0
Q ss_pred EEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEE--eec
Q psy14726 391 GTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEK--YNY 466 (712)
Q Consensus 391 ~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~--yd~ 466 (712)
++++. ++.||+.... ...++++|+... +..+...+. .-.+++. -+|++|+.+-.. +.+.. .+.
T Consensus 32 ~iAv~pdG~l~vt~~~-----~~~I~~i~p~g~-~~~~~~~~~--~~~gla~~~dG~l~v~~~~~-----~~~~~~~~~~ 98 (302)
T d2p4oa1 32 NLASAPDGTIFVTNHE-----VGEIVSITPDGN-QQIHATVEG--KVSGLAFTSNGDLVATGWNA-----DSIPVVSLVK 98 (302)
T ss_dssp EEEECTTSCEEEEETT-----TTEEEEECTTCC-EEEEEECSS--EEEEEEECTTSCEEEEEECT-----TSCEEEEEEC
T ss_pred CEEECCCCCEEEEeCC-----CCEEEEEeCCCC-EEEEEcCCC--CcceEEEcCCCCeEEEecCC-----ceEEEEEecc
Confidence 34444 7788887553 347999998865 444444442 2233333 467899875322 22333 344
Q ss_pred CCCceEEcccCCccccceeEEEE-CCEEEEEcccCCCCccCceEEeeCCCCeeEEe---CCC-----C-CCCcceEEEEE
Q psy14726 467 TENQWSLIAPMNVERSDASATTL-QGKIYITGGFNGHNCLNSCEVYDPECNQWTLI---EPM-----R-HRRSGVSCIAY 536 (712)
Q Consensus 467 ~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~---~~~-----p-~~r~~~~~~~~ 536 (712)
...+-+.+...+........+.- ++++|+.-.. ...++.+|+.+..=... +.+ . ......+....
T Consensus 99 ~~~~~~~~~~~~~~~~~n~i~~~~~g~~~v~~~~-----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~ 173 (302)
T d2p4oa1 99 SDGTVETLLTLPDAIFLNGITPLSDTQYLTADSY-----RGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRF 173 (302)
T ss_dssp TTSCEEEEEECTTCSCEEEEEESSSSEEEEEETT-----TTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEE
T ss_pred cccceeeccccCCccccceeEEccCCCEEeeccc-----cccceeeeccCCcceeEecCCccceeeccCccccccccccc
Confidence 44555556555555444444433 7888876432 25688888887753222 111 1 11122334455
Q ss_pred CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcC----CCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 537 HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVP----DMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 537 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~----~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
++.+|+.... ...+++++.....-.... ....+ .+++.- +|.||+....+ +.|.+|+|....
T Consensus 174 ~~~l~~~~~~-----~~~i~~~~~~~~~~~~~~~~~~~~~~p---dgia~d~dG~l~va~~~~-----~~V~~i~p~G~~ 240 (302)
T d2p4oa1 174 GNFLYVSNTE-----KMLLLRIPVDSTDKPGEPEIFVEQTNI---DDFAFDVEGNLYGATHIY-----NSVVRIAPDRST 240 (302)
T ss_dssp TTEEEEEETT-----TTEEEEEEBCTTSCBCCCEEEEESCCC---SSEEEBTTCCEEEECBTT-----CCEEEECTTCCE
T ss_pred CCceeeecCC-----CCeEEeccccccccccccccccCCCCC---cceEECCCCCEEEEEcCC-----CcEEEECCCCCE
Confidence 7888887653 367888887654211110 01111 123333 67888885433 368999998765
Q ss_pred EEEccCCCCcccceEEEEEc
Q psy14726 612 WYEATDMNIYRSALSACVIM 631 (712)
Q Consensus 612 W~~~~~~p~~r~~~~~~~~~ 631 (712)
-... ..+.+-.+..++.++
T Consensus 241 ~~~~-~~~~~~~~pt~vafg 259 (302)
T d2p4oa1 241 TIIA-QAEQGVIGSTAVAFG 259 (302)
T ss_dssp EEEE-CGGGTCTTEEEEEEC
T ss_pred EEEE-ecCCCCCCceEEEEc
Confidence 4433 223334445666664
|
| >d1itva_ b.66.1.1 (A:) Gelatinase B (MMP-9) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 4-bladed beta-propeller superfamily: Hemopexin-like domain family: Hemopexin-like domain domain: Gelatinase B (MMP-9) species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.04 E-value=0.78 Score=40.22 Aligned_cols=140 Identities=8% Similarity=0.070 Sum_probs=80.1
Q ss_pred EEEEECCeEEEEcccCCCCCCceeEEeecCCCceE----Ec----ccCCccccceeEEE-E--CCEEEEEcccCCCCccC
Q psy14726 438 STAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWS----LI----APMNVERSDASATT-L--QGKIYITGGFNGHNCLN 506 (712)
Q Consensus 438 ~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~----~~----~~~p~~r~~~~~~~-~--~~~iyv~GG~~~~~~~~ 506 (712)
+++..+|.+|+|-| ..+|+++....... .+ +.+|.. --|+. . ++++|.+-| +
T Consensus 11 Av~~~~G~~y~Fkg-------~~ywr~~~~~~~~~~~P~~I~~~w~glp~~---IDAAf~~~~~~k~yfFkg-------~ 73 (195)
T d1itva_ 11 AIAEIGNQLYLFKD-------GKYWRFSEGRGSRPQGPFLIADKWPALPRK---LDSVFEEPLSKKLFFFSG-------R 73 (195)
T ss_dssp EEEEETTEEEEEET-------TEEEEECCSSSCCCEEEEEHHHHCTTSCSS---CSEEEECTTTCCEEEEET-------T
T ss_pred eEEEeCCEEEEEEC-------CEEEEEeCCCCCcCCCcEEeeeecCCCCCC---ccEEEEECCCCEEEEEec-------C
Confidence 46678999999977 45777765433321 11 234422 22332 2 578999876 4
Q ss_pred ceEEeeCCCCee-EEeCC--CCCC--CcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEE-----c----CCCC
Q psy14726 507 SCEVYDPECNQW-TLIEP--MRHR--RSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQ-----V----PDMY 572 (712)
Q Consensus 507 ~v~~yd~~~~~W-~~~~~--~p~~--r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-----~----~~~p 572 (712)
.+++|+-.+-.. ..+.. +|.. ....+...-++++|++=| +..++||..+++=.. + +.+|
T Consensus 74 ~~~~y~~~~~~~Pk~i~~~g~p~~~~~idaa~~~~~g~~Y~FkG-------~~y~ryd~~~~~v~~gyPk~i~~~w~gvp 146 (195)
T d1itva_ 74 QVWVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSG-------RRLWRFDVKAQMVDPRSASEVDRMFPGVP 146 (195)
T ss_dssp EEEEEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEET-------TEEEEEETTTTEECGGGCEEHHHHSTTSC
T ss_pred EEEEEcCccccCCEEhhhcCCCCCchheeeEEEcCCCeEEEEec-------cEEEEEeCCcccccCCCccchhhhcCCCC
Confidence 577886432111 12222 3322 222233333689999977 578999988764221 1 2233
Q ss_pred CCccceEEEEECCEEEEEcccCCCceeeeEEEEECCCC
Q psy14726 573 NPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTD 610 (712)
Q Consensus 573 ~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 610 (712)
..-.++...++.+|++-|. ..|.||..+.
T Consensus 147 --~~idaAf~~~~~~Yffkg~-------~y~r~~~~~~ 175 (195)
T d1itva_ 147 --LDTHDVFQFREKAYFCQDR-------FYWRVSSRSE 175 (195)
T ss_dssp --SSCSEEEEETTEEEEEETT-------EEEEEECCTT
T ss_pred --CCCcEEEEeCCcEEEEECC-------EEEEEcCCce
Confidence 2234566679999999663 5688887654
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.03 E-value=2.2 Score=39.58 Aligned_cols=177 Identities=14% Similarity=0.126 Sum_probs=93.0
Q ss_pred eEEEEECCCCcEEEcccCCCCCCCcceEEEEECCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEEC
Q psy14726 364 FVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHH 443 (712)
Q Consensus 364 ~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~ 443 (712)
.+..+|.....-... ... ..........++..++.|+.++ .+..||..+.+-....... .....+...+
T Consensus 158 ~i~~~d~~~~~~~~~--~~~--~~~~~~~~~~~~~~l~s~~~dg-----~i~~~d~~~~~~~~~~~~~--~~~v~~~~~~ 226 (342)
T d2ovrb2 158 MVKVWDPETETCLHT--LQG--HTNRVYSLQFDGIHVVSGSLDT-----SIRVWDVETGNCIHTLTGH--QSLTSGMELK 226 (342)
T ss_dssp CEEEEEGGGTEEEEE--ECC--CSSCEEEEEECSSEEEEEETTS-----CEEEEETTTCCEEEEECCC--CSCEEEEEEE
T ss_pred eEEEeecccceeeEE--EcC--cccccccccCCCCEEEEEeCCC-----eEEEeecccceeeeEeccc--ccceeEEecC
Confidence 456677665543321 111 1112233334666777777543 5888998877643322211 1122333445
Q ss_pred CeEEEEcccCCCCCCceeEEeecCCCceEEc-ccCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCeeE-Ee
Q psy14726 444 DVIYAMGGYNGQRRQNSVEKYNYTENQWSLI-APMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWT-LI 521 (712)
Q Consensus 444 ~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~-~~ 521 (712)
+.+++.|+.+ ..+..||....+-... ...........+...++.+++.||.++ .+..||..+++.. .+
T Consensus 227 ~~~l~s~s~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s~Dg-----~i~iwd~~tg~~i~~~ 296 (342)
T d2ovrb2 227 DNILVSGNAD-----STVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDG-----TVKLWDLKTGEFIRNL 296 (342)
T ss_dssp TTEEEEEETT-----SCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTS-----EEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCC-----CEEEEEecccccccccccccceeeeceeecccCCCeeEEEcCCC-----EEEEEECCCCCEEEEE
Confidence 5666777644 4588899877654333 222222333344556777888887653 5889999887643 22
Q ss_pred CCCCCCCc---ceEEEEE-CCEEEEEcCCCCCCccceEEEEeCCC
Q psy14726 522 EPMRHRRS---GVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVT 562 (712)
Q Consensus 522 ~~~p~~r~---~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~ 562 (712)
.....+-. -.++... ++.+++.|+.++.. ...++.+|.+.
T Consensus 297 ~~~~~~~~~~~v~~v~~s~~~~~la~g~~dGt~-~~~l~~~Df~~ 340 (342)
T d2ovrb2 297 VTLESGGSGGVVWRIRASNTKLVCAVGSRNGTE-ETKLLVLDFDV 340 (342)
T ss_dssp EECTTGGGTCEEEEEEECSSEEEEEEECSSSSS-CCEEEEEECCC
T ss_pred ecccCCCCCCCEEEEEECCCCCEEEEEeCCCCC-eeEEEEEeCCC
Confidence 22221111 1122223 44566666655433 35577777654
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.02 E-value=1.3 Score=40.65 Aligned_cols=227 Identities=4% Similarity=-0.064 Sum_probs=102.3
Q ss_pred eEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEe
Q psy14726 349 ILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEI 427 (712)
Q Consensus 349 ~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 427 (712)
.+++.|+.+ ..|..+|..+++.... .... ...-.+++.. ++.+++.++.. ..+..++....+....
T Consensus 30 ~~l~s~s~D-----g~i~iWd~~~~~~~~~--~~~h-~~~V~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 96 (317)
T d1vyhc1 30 SVMVSASED-----ATIKVWDYETGDFERT--LKGH-TDSVQDISFDHSGKLLASCSAD-----MTIKLWDFQGFECIRT 96 (317)
T ss_dssp SEEEEEESS-----SCEEEEETTTCCCCEE--ECCC-SSCEEEEEECTTSSEEEEEETT-----SCCCEEETTSSCEEEC
T ss_pred CEEEEEeCC-----CeEEEEECCCCCEEEE--EeCC-CCcEEEEeeecccccccccccc-----cccccccccccccccc
Confidence 455666642 3577888776654331 1111 1111222222 44455555432 2234556555554443
Q ss_pred CCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCcc
Q psy14726 428 APMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCL 505 (712)
Q Consensus 428 ~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~ 505 (712)
...............++..++.++.+ ..+..||..+.+....-. ........+.. ++.+++.|+.++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~d-----~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~d~---- 165 (317)
T d1vyhc1 97 MHGHDHNVSSVSIMPNGDHIVSASRD-----KTIKMWEVQTGYCVKTFT--GHREWVRMVRPNQDGTLIASCSNDQ---- 165 (317)
T ss_dssp CCCCSSCEEEEEECSSSSEEEEEETT-----SEEEEEETTTCCEEEEEE--CCSSCEEEEEECTTSSEEEEEETTS----
T ss_pred cccccccceeeeccCCCceEEeeccC-----cceeEeecccceeeeEEc--cCCCcceeeecccCCCEEEEEeCCC----
Confidence 22222222222223345555555543 457778887776533211 11122222333 566777776554
Q ss_pred CceEEeeCCCCeeEEe-----------CCCCCC---------CcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcE
Q psy14726 506 NSCEVYDPECNQWTLI-----------EPMRHR---------RSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTW 565 (712)
Q Consensus 506 ~~v~~yd~~~~~W~~~-----------~~~p~~---------r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 565 (712)
.+..+|..+.+.... .-.|.. ..........+.+++.|+.+ ..+..||..+.+.
T Consensus 166 -~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-----~~i~~~~~~~~~~ 239 (317)
T d1vyhc1 166 -TVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD-----KTIKMWDVSTGMC 239 (317)
T ss_dssp -CEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETT-----SEEEEEETTTTEE
T ss_pred -eEEEEeeccceeeEEEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCC-----CEEEEEECCCCcE
Confidence 355666555443221 000000 00011112234455555543 4677888887654
Q ss_pred EEcCCCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 566 SQVPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 566 ~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
...-... ...-.+++.. ++.+++.||.++ .+.+||..+++
T Consensus 240 ~~~~~~~-~~~v~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~~ 280 (317)
T d1vyhc1 240 LMTLVGH-DNWVRGVLFHSGGKFILSCADDK-----TLRVWDYKNKR 280 (317)
T ss_dssp EEEEECC-SSCEEEEEECSSSSCEEEEETTT-----EEEEECCTTSC
T ss_pred EEEEeCC-CCCEEEEEECCCCCEEEEEECCC-----eEEEEECCCCc
Confidence 3221100 1111122222 677778888765 57888887653
|
| >d1fs1b1 a.157.1.1 (B:86-140) Cyclin A/CDK2-associated p45, Skp1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Skp1 dimerisation domain-like superfamily: Skp1 dimerisation domain-like family: Skp1 dimerisation domain-like domain: Cyclin A/CDK2-associated p45, Skp1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.99 E-value=0.019 Score=39.03 Aligned_cols=43 Identities=14% Similarity=0.319 Sum_probs=35.1
Q ss_pred ecChhhHHHHHHHhhhcChHHHHHHHHHhhcccCChhhHHHHH
Q psy14726 159 HITEDNVASLLLATDFFCMSKAQDLCCDFIKRLTTPRNCFGIL 201 (712)
Q Consensus 159 ~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~l~~~n~~~i~ 201 (712)
.++.+.+.+|+.||++++|+.|.++|++.+...+...+.-+|.
T Consensus 9 ~~d~~~Lf~Li~AAnyL~I~~Lldl~c~~vA~~ikgKt~eeiR 51 (55)
T d1fs1b1 9 KVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIR 51 (55)
T ss_dssp CSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred HcCHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHcCCCHHHHH
Confidence 4677889999999999999999999999987766555554444
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.97 E-value=2.5 Score=39.43 Aligned_cols=228 Identities=10% Similarity=0.085 Sum_probs=113.9
Q ss_pred EEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEECCEEEEEeecCCCCccceEEEEECCCCcEEEeCC
Q psy14726 350 LFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAP 429 (712)
Q Consensus 350 i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 429 (712)
.++.|+.+ ..|..+|..+++-...-.. . ...-.+++...+..++.||.++ .+..++....+-.....
T Consensus 25 ~l~tgs~D-----g~i~vWd~~~~~~~~~l~~--H-~~~V~~l~~s~~~~l~s~s~D~-----~i~iw~~~~~~~~~~~~ 91 (355)
T d1nexb2 25 YVITGADD-----KMIRVYDSINKKFLLQLSG--H-DGGVWALKYAHGGILVSGSTDR-----TVRVWDIKKGCCTHVFE 91 (355)
T ss_dssp EEEEEETT-----TEEEEEETTTTEEEEEEEC--C-SSCEEEEEEETTTEEEEEETTC-----CEEEEETTTTEEEEEEC
T ss_pred EEEEEeCC-----CeEEEEECCCCcEEEEEEC--C-CCCEEEEEEcCCCEEEEEeccc-----ccccccccccccccccc
Confidence 45566642 3688899888765431111 1 1112334444555677777543 47788887776544333
Q ss_pred CCCCc-ceeEEEEE-CCeEEEEcccCCCCCCceeEEeecCCCceEEcc----------cCCccc-----------cceeE
Q psy14726 430 MNFKR-CYVSTAVH-HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA----------PMNVER-----------SDASA 486 (712)
Q Consensus 430 ~~~~r-~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~----------~~p~~r-----------~~~~~ 486 (712)
..... .....+.. ++..++.|+.+ ..+..||..+..-.... ..+... .....
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~d-----~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 166 (355)
T d1nexb2 92 GHNSTVRCLDIVEYKNIKYIVTGSRD-----NTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRT 166 (355)
T ss_dssp CCSSCEEEEEEEEETTEEEEEEEETT-----SEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECCSSCEEE
T ss_pred cccccccccccccccccceeeeecCC-----CcEEEEEccCCceeccccccceeccceeccccccceeeeeeeccccccc
Confidence 22222 22222223 44555666543 34666666544311100 000000 01111
Q ss_pred EEECCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEE
Q psy14726 487 TTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWS 566 (712)
Q Consensus 487 ~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 566 (712)
...++.+.+.|+.+ ..+..||..+.+...................++..++.|+.+ ..+..||..+....
T Consensus 167 ~~~~~~~~~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-----~~i~i~d~~~~~~~ 236 (355)
T d1nexb2 167 VSGHGNIVVSGSYD-----NTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMD-----TTIRIWDLENGELM 236 (355)
T ss_dssp EEEETTEEEEEETT-----SCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETT-----SCEEEEETTTCCEE
T ss_pred cccccceeeeeccc-----ceeeeeecccccceeeeeccccccccccccccceeeeccccc-----ceEEeeeccccccc
Confidence 22244555566544 357788888776544433222222223333355566666643 45778888876543
Q ss_pred EcCCCCCCccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeE
Q psy14726 567 QVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEW 612 (712)
Q Consensus 567 ~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 612 (712)
..-. .......++..++..++.|+.++ .+.+||..+..-
T Consensus 237 ~~~~--~h~~~v~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~ 275 (355)
T d1nexb2 237 YTLQ--GHTALVGLLRLSDKFLVSAAADG-----SIRGWDANDYSR 275 (355)
T ss_dssp EEEC--CCSSCCCEEEECSSEEEEECTTS-----EEEEEETTTCCE
T ss_pred cccc--cccccccccccccceeeeeeccc-----ccccccccccce
Confidence 3311 11112234556777888888765 578888877653
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=93.50 E-value=2.7 Score=38.27 Aligned_cols=196 Identities=14% Similarity=0.028 Sum_probs=99.1
Q ss_pred eEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecC
Q psy14726 390 HGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYT 467 (712)
Q Consensus 390 ~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~ 467 (712)
+++++- ++.+|+..... ...+..+++....=.... ....-..+++++ -+|+||+....+ ..+.+++..
T Consensus 17 ~~vavd~dG~i~v~~~~~----~~~i~~~~~~~~~~~~~~-~~~~~~p~gvav~~~g~i~v~d~~~-----~~i~~~~~~ 86 (260)
T d1rwia_ 17 SGVAVDSAGNVYVTSEGM----YGRVVKLATGSTGTTVLP-FNGLYQPQGLAVDGAGTVYVTDFNN-----RVVTLAAGS 86 (260)
T ss_dssp EEEEECTTCCEEEEECSS----SCEEEEEC----CEEECC-CCSCCSCCCEEECTTCCEEEEETTT-----EEEEECTTC
T ss_pred CEEEEcCCCCEEEEEcCC----CCEEEEEcCCCceEEEec-cCCccCceEEEEcCCCCEEEeeeee-----ceeeeeeec
Confidence 445554 67888886532 234666666554422221 111111223333 467899875421 334455545
Q ss_pred CCceEEcccCCccccceeEEE-ECCEEEEEcccCCCCccCceEEeeCCCCeeEEeC--CCCCCCcceEEEE-ECCEEEEE
Q psy14726 468 ENQWSLIAPMNVERSDASATT-LQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIE--PMRHRRSGVSCIA-YHECIYVI 543 (712)
Q Consensus 468 ~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~-~~~~iyv~ 543 (712)
+..+... ......-.++++ -+++||+..-. ...+..+++......... .+..|+ +.+. -++.+|+.
T Consensus 87 ~~~~~~~--~~~~~~p~~iavd~~g~i~v~d~~-----~~~~~~~~~~~~~~~~~~~~~~~~p~---~i~~~~~g~~~v~ 156 (260)
T d1rwia_ 87 NNQTVLP--FDGLNYPEGLAVDTQGAVYVADRG-----NNRVVKLAAGSKTQTVLPFTGLNDPD---GVAVDNSGNVYVT 156 (260)
T ss_dssp SCCEECC--CCSCCSEEEEEECTTCCEEEEEGG-----GTEEEEECTTCSSCEECCCCSCCSCC---EEEECTTCCEEEE
T ss_pred cceeeee--eeeeeecccccccccceeEeeccc-----cccccccccccceeeeeeecccCCcc---eeeecCCCCEeee
Confidence 5544321 111111123332 26788886422 245777777665533332 223332 2222 25678887
Q ss_pred cCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCeEEEcc
Q psy14726 544 GGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEAT 616 (712)
Q Consensus 544 GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 616 (712)
... ...+.+||++........... .....++++- +|.||+..-.+ ..+..|++.........
T Consensus 157 ~~~-----~~~i~~~d~~~~~~~~~~~~~-~~~p~gi~~d~~g~l~vsd~~~-----~~i~~~~~~~~~~~~~~ 219 (260)
T d1rwia_ 157 DTD-----NNRVVKLEAESNNQVVLPFTD-ITAPWGIAVDEAGTVYVTEHNT-----NQVVKLLAGSTTSTVLP 219 (260)
T ss_dssp EGG-----GTEEEEECTTTCCEEECCCSS-CCSEEEEEECTTCCEEEEETTT-----TEEEEECTTCSCCEECC
T ss_pred ccc-----cccccccccccceeeeeeccc-cCCCccceeeeeeeeeeeecCC-----CEEEEEeCCCCeEEEEc
Confidence 542 357899999877665554221 1222444443 67888874322 35888999887766653
|
| >d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Comamonas testosteroni [TaxId: 285]
Probab=93.07 E-value=3.9 Score=42.24 Aligned_cols=117 Identities=14% Similarity=0.239 Sum_probs=73.6
Q ss_pred EEECCEEEEEeecCCCCccceEEEEECCCCc--EEEeCCCCC--------CcceeEEEEECCeEEEEcccCCCCCCceeE
Q psy14726 393 AVIGYNIYVIGGFDGNEYYNSCRCFNAVTKV--WKEIAPMNF--------KRCYVSTAVHHDVIYAMGGYNGQRRQNSVE 462 (712)
Q Consensus 393 ~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~~~--------~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~ 462 (712)
++.++.||+... .+.++++|..|++ |+.-+..+. .....+.+..++++|+... ...++
T Consensus 74 iv~~g~vyv~t~------~~~v~AlDa~TG~~~W~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~t~------~g~l~ 141 (573)
T d1kb0a2 74 VVVDGIMYVSAS------WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW------DGRLI 141 (573)
T ss_dssp EEETTEEEEECG------GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT------TSEEE
T ss_pred EEECCEEEEECC------CCeEEEEeCCCCCeEEEeCCCCCcccccccccccccccceEECCcEEEEec------cccee
Confidence 456999998754 3569999999886 875433221 1222356778889888632 24688
Q ss_pred EeecCCCc--eEEcc-cCCcc--ccceeEEEECCEEEEEcccC-CCCccCceEEeeCCCCe--eEEeC
Q psy14726 463 KYNYTENQ--WSLIA-PMNVE--RSDASATTLQGKIYITGGFN-GHNCLNSCEVYDPECNQ--WTLIE 522 (712)
Q Consensus 463 ~yd~~~~~--W~~~~-~~p~~--r~~~~~~~~~~~iyv~GG~~-~~~~~~~v~~yd~~~~~--W~~~~ 522 (712)
.+|..+.+ |+.-. ..+.. ....+.+++++++++ |+.. .......|..||..|++ |+.-.
T Consensus 142 alda~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~viv-g~~~~~~~~~G~v~a~D~~TG~~~W~~~t 208 (573)
T d1kb0a2 142 ALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVII-GNGGAEYGVRGYITAYDAETGERKWRWFS 208 (573)
T ss_dssp EEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEE-CCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred eeccccccceecccCccCCcceEEeecceEEEeccEEE-eeccccccccceEEEEecCCccceeeeee
Confidence 89988875 76532 22222 122344667888876 4332 22334679999999987 87543
|
| >d1qhua1 b.66.1.1 (A:24-215) Hemopexin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 4-bladed beta-propeller superfamily: Hemopexin-like domain family: Hemopexin-like domain domain: Hemopexin species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=92.98 E-value=0.71 Score=40.40 Aligned_cols=132 Identities=14% Similarity=0.149 Sum_probs=73.2
Q ss_pred CCEEEEEeecCCCCccceEEEEEC-----CCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNA-----VTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQ 470 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~-----~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 470 (712)
++.+|+|=|. .+|+.++ .+..|.. +|.. -..+...-++++|+|-| +.+|+|+-.+..
T Consensus 18 ~G~~y~Fkg~-------~~wr~~~~~p~~Is~~Wpg---lp~~-IDAaf~~~~~~~yfFkG-------~~yw~y~~~~~~ 79 (192)
T d1qhua1 18 NGTMLFFKDE-------FVWKSHRGIRELISERWKN---FIGP-VDAAFRHGHTSVYLIKG-------DKVWVYTSEKNE 79 (192)
T ss_dssp TSCEEEEETT-------EEEETTTTEEEEHHHHSTT---CCSC-CSEEEEETTTEEEEEET-------TEEEEECC----
T ss_pred CCcEEEEeCC-------EEEEcCCCCeeEHhhhcCC---CCCC-ccEEEEcCCCcEEEEeC-------CEEEEEeCCccc
Confidence 7789999663 2343322 1233433 3322 22222334679999987 568888754333
Q ss_pred e---EEcc----cCCccccceeEEEE------CCEEEEEcccCCCCccCceEEeeCCCCeeEEe--CCCCCCCcceEEEE
Q psy14726 471 W---SLIA----PMNVERSDASATTL------QGKIYITGGFNGHNCLNSCEVYDPECNQWTLI--EPMRHRRSGVSCIA 535 (712)
Q Consensus 471 W---~~~~----~~p~~r~~~~~~~~------~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~--~~~p~~r~~~~~~~ 535 (712)
. ..+. .+|. .--++... ++++|++-| +..++||..+..=..- +.+| .. .+++.
T Consensus 80 ~gyPk~i~~~~~glp~--~iDAA~~~~~~~~~~~~~yfFkg-------~~yw~yd~~~~~~~~~~w~gip--~~-daA~~ 147 (192)
T d1qhua1 80 KVYPKSLQDEFPGIPF--PLDAAVECHRGECQDEGILFFQG-------NRKWFWDLTTGTKKERSWPAVG--NC-TSALR 147 (192)
T ss_dssp ---CEEHHHHSTTCCS--SCCEEEEECBBTBSSSEEEEEET-------TEEEEEETTTTEEEEECCTTSC--CC-SEEEE
T ss_pred cCCCcChHHhCCCCCC--CceEEEEccccccCCCeEEEEeC-------CeEEEEeCCCCCcccccccCcC--Cc-ceeEE
Confidence 2 1221 2221 11223332 789999987 4578999888741111 1222 22 34556
Q ss_pred ECCEEEEEcCCCCCCccceEEEEeCCCCc
Q psy14726 536 YHECIYVIGGFNGMSRMCNGEKYNPVTKT 564 (712)
Q Consensus 536 ~~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 564 (712)
.++.+|++-| +.-++||..+.+
T Consensus 148 ~~g~~YfFkg-------~~y~r~~~~~~~ 169 (192)
T d1qhua1 148 WLGRYYCFQG-------NQFLRFNPVSGE 169 (192)
T ss_dssp ETTEEEEEET-------TEEEEECTTTCC
T ss_pred eCCcEEEEEC-------CEEEEEcCCcce
Confidence 7999999987 578899887754
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=92.64 E-value=3.8 Score=37.65 Aligned_cols=218 Identities=10% Similarity=0.047 Sum_probs=111.8
Q ss_pred CceEEEEeecCCCCCCceEEEEECCCCcEEE-cccCCCC--CCCcceEEEEE--CCEEEEEeecCCCCccceEEEEECCC
Q psy14726 347 HEILFAIGGWSGGSPTDFVETYDTRADRWVK-IEQVDPM--GPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVT 421 (712)
Q Consensus 347 ~~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~-~~~~~~~--~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~ 421 (712)
.+.||+.-.. ...|..||+.. ++.. +.....+ ........+.. .+..++.... ....+..++...
T Consensus 33 dg~i~VaD~~-----n~rI~v~d~~G-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~g 102 (279)
T d1q7fa_ 33 QNDIIVADTN-----NHRIQIFDKEG-RFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS----PTHQIQIYNQYG 102 (279)
T ss_dssp TCCEEEEEGG-----GTEEEEECTTS-CEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG----GGCEEEEECTTS
T ss_pred CCCEEEEECC-----CCEEEEEeCCC-CEEEEecccCCCcccccccccccccccccccceeccC----Cccccccccccc
Confidence 4557765431 24577888764 3332 2111111 12233444444 2333332211 124678888877
Q ss_pred CcEEEeCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE-CCEEEEEccc
Q psy14726 422 KVWKEIAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL-QGKIYITGGF 499 (712)
Q Consensus 422 ~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~ 499 (712)
..+........ ...+++++ .+|.+|+.... ...+.+||+..+.-..............+++- ++.+|+....
T Consensus 103 ~~~~~~~~~~~-~~p~~~avd~~G~i~v~~~~-----~~~~~~~~~~g~~~~~~g~~~~~~~~~~i~~d~~g~i~v~d~~ 176 (279)
T d1q7fa_ 103 QFVRKFGATIL-QHPRGVTVDNKGRIIVVECK-----VMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNR 176 (279)
T ss_dssp CEEEEECTTTC-SCEEEEEECTTSCEEEEETT-----TTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGG
T ss_pred cceeecCCCcc-cccceeccccCCcEEEEeec-----cceeeEeccCCceeecccccccccccceeeeccceeEEeeecc
Confidence 76666543222 22233443 45788887542 25688898877654444332222222233222 6789998764
Q ss_pred CCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEE-ECCEEEEEcCCCCCCccceEEEEeCCCCcEE--EcCCCCCCcc
Q psy14726 500 NGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIA-YHECIYVIGGFNGMSRMCNGEKYNPVTKTWS--QVPDMYNPRS 576 (712)
Q Consensus 500 ~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~--~~~~~p~~r~ 576 (712)
. ..+++||+.......++.......-.++++ -+|.|||....+ ...+.+|++. .++. ....... ..
T Consensus 177 ~-----~~V~~~d~~G~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~----~~~v~~f~~~-G~~~~~~~~~~~~-~~ 245 (279)
T d1q7fa_ 177 A-----HCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHN----NFNLTIFTQD-GQLISALESKVKH-AQ 245 (279)
T ss_dssp G-----TEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSS----SCEEEEECTT-SCEEEEEEESSCC-SC
T ss_pred c-----cceeeeecCCceeeeecccccccCCcccccccCCeEEEEECCC----CcEEEEECCC-CCEEEEEeCCCCC-CC
Confidence 3 578999998777666653222112233333 257899985432 2358889875 3322 1112111 12
Q ss_pred ceEEEEE-CCEEEEEc
Q psy14726 577 NFAIEVI-DDMIFAIG 591 (712)
Q Consensus 577 ~~~~~~~-~~~i~v~G 591 (712)
.+++++- ++.|||..
T Consensus 246 p~~vav~~dG~l~V~~ 261 (279)
T d1q7fa_ 246 CFDVALMDDGSVVLAS 261 (279)
T ss_dssp EEEEEEETTTEEEEEE
T ss_pred EeEEEEeCCCcEEEEe
Confidence 3444444 77888864
|
| >d1gena_ b.66.1.1 (A:) Gelatinase A (MMP-2), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 4-bladed beta-propeller superfamily: Hemopexin-like domain family: Hemopexin-like domain domain: Gelatinase A (MMP-2), C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.62 E-value=1.1 Score=39.43 Aligned_cols=144 Identities=13% Similarity=0.064 Sum_probs=77.3
Q ss_pred EEEEECCEEEEEeecCCCCccceEEEEECCCCcEE---Ee----CCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeE
Q psy14726 391 GTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWK---EI----APMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVE 462 (712)
Q Consensus 391 ~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~---~~----~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~ 462 (712)
+++.+++.+|+|=| +.+|+++.....+. .+ +.+|.. -..+... .++++|++-| +.+|
T Consensus 17 Av~~~~G~~y~Fkg-------~~~wr~~~~~~~~~~P~~I~~~w~glp~~-IdAA~~~~~~~~~yffkg-------~~~~ 81 (200)
T d1gena_ 17 GIAQIRGEIFFFKD-------RFIWRTVTPRDKPMGPLLVATFWPELPEK-IDAVYEAPQEEKAVFFAG-------NEYW 81 (200)
T ss_dssp EEEEETTEEEEEET-------TEEEEESSTTSCCEEEEEGGGTCTTSCSC-CSEEEEETTTTEEEEEET-------TEEE
T ss_pred EEEecCCeEEEEeC-------CEEEEEcCCCCCCCCcEehhhccCCCCCC-ceEEEEECCCCeEEEecC-------ceEE
Confidence 56667999999977 33455443322221 11 223322 1222222 3678999877 5678
Q ss_pred EeecCCCce---EEccc--CCccccceeEEEE---CCEEEEEcccCCCCccCceEEeeCCCCee-----EEeC----CCC
Q psy14726 463 KYNYTENQW---SLIAP--MNVERSDASATTL---QGKIYITGGFNGHNCLNSCEVYDPECNQW-----TLIE----PMR 525 (712)
Q Consensus 463 ~yd~~~~~W---~~~~~--~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W-----~~~~----~~p 525 (712)
+|+-.+-.. ..+.. +|..-...-+|.. ++++|++-| +..++||..+++= +.+. .+|
T Consensus 82 ~y~~~~~~~gyPk~i~~~g~p~~~~~iDAA~~~~~~g~~YfFkg-------~~y~ryd~~~~~vd~~yPk~I~~~w~gvp 154 (200)
T d1gena_ 82 IYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG-------DKFWRYNEVKKKMDPGFPKLIADAWNAIP 154 (200)
T ss_dssp EEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCCEEHHHHSSSCC
T ss_pred EEcCcccccCCCceehhcCCCCCccceeeEEEECCCCeEEEEeC-------cEEEEeccccceeccCcceehhhccCCCC
Confidence 887432111 11211 2222122223333 689999987 5688999887652 1121 233
Q ss_pred CCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCcE
Q psy14726 526 HRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTW 565 (712)
Q Consensus 526 ~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 565 (712)
. .-.++... ++++|++-| +..++||..+.+.
T Consensus 155 ~--~idAAf~~~~~g~~Yff~g-------~~y~r~d~~~~~~ 187 (200)
T d1gena_ 155 D--NLDAVVDLQGGGHSYFFKG-------AYYLKLENQSLKS 187 (200)
T ss_dssp S--SCSEEEECTTTCEEEEEET-------TEEEEEETTEEEE
T ss_pred C--CccEEEEecCCCEEEEEEC-------CEEEEEECCceEE
Confidence 2 22344443 689999987 5678888765443
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.15 E-value=3.9 Score=36.64 Aligned_cols=219 Identities=11% Similarity=0.161 Sum_probs=106.2
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEECCEEEEEeecCCCCccceEEEEECCCCcEEEe
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEI 427 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 427 (712)
+..++.|+.+ ..|..+|..+.+-... . ......-.+...++.+++.||.++ .+..++..++.....
T Consensus 25 ~~~l~sgs~D-----g~i~vWd~~~~~~~~~--l--~~H~~~V~~v~~~~~~l~s~s~D~-----~i~~~~~~~~~~~~~ 90 (293)
T d1p22a2 25 DQKIVSGLRD-----NTIKIWDKNTLECKRI--L--TGHTGSVLCLQYDERVIITGSSDS-----TVRVWDVNTGEMLNT 90 (293)
T ss_dssp SSEEEEEESS-----SCEEEEESSSCCEEEE--E--CCCSSCEEEEECCSSEEEEEETTS-----CEEEEESSSCCEEEE
T ss_pred CCEEEEEeCC-----CeEEEEECCCCcEEEE--E--ecCCCCEeeeecccceeecccccc-----ccccccccccccccc
Confidence 3456666643 3577889887765542 1 111111222233677777887543 578888888876554
Q ss_pred CCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCce-EEcccCCccccceeEEE-ECCEEEEEcccCCCCcc
Q psy14726 428 APMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQW-SLIAPMNVERSDASATT-LQGKIYITGGFNGHNCL 505 (712)
Q Consensus 428 ~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W-~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~ 505 (712)
....... ........+.+ +.++.. ..+..+|..+..- ................. ....++. ++.+
T Consensus 91 ~~~~~~~-~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~s~d----- 157 (293)
T d1p22a2 91 LIHHCEA-VLHLRFNNGMM-VTCSKD-----RSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVS-ASGD----- 157 (293)
T ss_dssp ECCCCSC-EEEEECCTTEE-EEEETT-----SCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEE-EETT-----
T ss_pred ccccccc-cccccccccce-eecccc-----cceeEeeccccccccccccccccccccccceeccccccc-ccCC-----
Confidence 3332221 11222223333 333322 3355566554431 11111111112222222 2444443 3333
Q ss_pred CceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEECC
Q psy14726 506 NSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDD 585 (712)
Q Consensus 506 ~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~ 585 (712)
..+..+|..+.+-... +.........+..++..++.|+.+ ..+..||+.+.+-....... .........++
T Consensus 158 ~~i~~~d~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~--~~~v~~~~~~~ 228 (293)
T d1p22a2 158 RTIKVWNTSTCEFVRT--LNGHKRGIACLQYRDRLVVSGSSD-----NTIRLWDIECGACLRVLEGH--EELVRCIRFDN 228 (293)
T ss_dssp SEEEEEETTTCCEEEE--EECCSSCEEEEEEETTEEEEEETT-----SCEEEEETTTCCEEEEECCC--SSCEEEEECCS
T ss_pred CceeeecCCCCcEEEE--EcccccccccccCCCCeEEEecCC-----CEEEEEecccceeeeeeccc--ceeeeeccccc
Confidence 4578888877653222 111122223334445556666654 45778998876654442221 12233445577
Q ss_pred EEEEEcccCCCceeeeEEEEEC
Q psy14726 586 MIFAIGGFNGVTTIYHVECYDE 607 (712)
Q Consensus 586 ~i~v~GG~~~~~~~~~v~~yd~ 607 (712)
..++.|+.++ .+.+||.
T Consensus 229 ~~l~sg~~dg-----~i~iwd~ 245 (293)
T d1p22a2 229 KRIVSGAYDG-----KIKVWDL 245 (293)
T ss_dssp SEEEEEETTS-----CEEEEEH
T ss_pred eEEEEEcCCC-----EEEEEEC
Confidence 7778888765 4566664
|
| >d1nexa1 a.157.1.1 (A:116-185) Centromere DNA-binding protein complex Cbf3 subunit D, CBF3D {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Skp1 dimerisation domain-like superfamily: Skp1 dimerisation domain-like family: Skp1 dimerisation domain-like domain: Centromere DNA-binding protein complex Cbf3 subunit D, CBF3D species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=92.14 E-value=0.048 Score=39.09 Aligned_cols=43 Identities=14% Similarity=0.325 Sum_probs=34.2
Q ss_pred ecChhhHHHHHHHhhhcChHHHHHHHHHhhcccCChhhHHHHH
Q psy14726 159 HITEDNVASLLLATDFFCMSKAQDLCCDFIKRLTTPRNCFGIL 201 (712)
Q Consensus 159 ~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~l~~~n~~~i~ 201 (712)
.++.+.+.+|+.||++|+++.|.++|++.+...+...+.-++.
T Consensus 10 ~~d~~~L~~li~AAnyL~I~~Ll~l~c~~vA~~ikgkt~eeiR 52 (70)
T d1nexa1 10 KVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIR 52 (70)
T ss_dssp CSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred hcCHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHccCCHHHHH
Confidence 4678899999999999999999999999886655544444443
|
| >d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=92.06 E-value=7.6 Score=39.88 Aligned_cols=118 Identities=13% Similarity=0.183 Sum_probs=72.7
Q ss_pred EEECCEEEEEeecCCCCccceEEEEECC-CC--cEEEeCCCCCCc--------ceeEEEEECCeEEEEcccCCCCCCcee
Q psy14726 393 AVIGYNIYVIGGFDGNEYYNSCRCFNAV-TK--VWKEIAPMNFKR--------CYVSTAVHHDVIYAMGGYNGQRRQNSV 461 (712)
Q Consensus 393 ~~~~~~lyv~GG~~~~~~~~~v~~yd~~-~~--~W~~~~~~~~~r--------~~~~~~~~~~~iyv~GG~~~~~~~~~v 461 (712)
.++++.||+..+.. +.++.+|.. |+ .|+.-+..+... ..-+++..+++||+... ...+
T Consensus 59 ~v~~g~vyv~t~~~-----~~v~Alda~~tG~~~W~~~~~~~~~~~~~~~~~~~~rg~a~~~~~i~~~~~------~g~l 127 (571)
T d2ad6a1 59 LVIGDMMYVHSAFP-----NNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA------NGHL 127 (571)
T ss_dssp EEETTEEEEECSTT-----TCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT------TSEE
T ss_pred EEECCEEEEecCCC-----CeEEEEeCCCCCceEEEecCCCCcccccccccCcCCCcceeeCCeEEEEeC------CCcE
Confidence 45699999986532 358888864 45 487543333211 11245778899987532 1468
Q ss_pred EEeecCCCc--eEEc-cc-CCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCe--eEEe
Q psy14726 462 EKYNYTENQ--WSLI-AP-MNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQ--WTLI 521 (712)
Q Consensus 462 ~~yd~~~~~--W~~~-~~-~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~ 521 (712)
+.+|.+|.+ |..- .. -+......+-+++++++|+-+..........+..||..|++ |+.-
T Consensus 128 ~alda~tG~~~w~~~~~~~~~~~~~t~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~ 193 (571)
T d2ad6a1 128 LALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp EEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred EeeehhhhhhhccccccccccccceeecCeEeCCeEEEeeccccccccCcEEEEECCCCcEEEEEe
Confidence 899998875 7642 22 12222333446789999875543333345679999999887 8654
|
| >d1qhua1 b.66.1.1 (A:24-215) Hemopexin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 4-bladed beta-propeller superfamily: Hemopexin-like domain family: Hemopexin-like domain domain: Hemopexin species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=91.89 E-value=1.2 Score=38.80 Aligned_cols=132 Identities=14% Similarity=0.134 Sum_probs=72.9
Q ss_pred ECCeEEEEcccCCCCCCceeEEeecC-----CCceEEcccCCccccceeEEEE-CCEEEEEcccCCCCccCceEEeeCCC
Q psy14726 442 HHDVIYAMGGYNGQRRQNSVEKYNYT-----ENQWSLIAPMNVERSDASATTL-QGKIYITGGFNGHNCLNSCEVYDPEC 515 (712)
Q Consensus 442 ~~~~iyv~GG~~~~~~~~~v~~yd~~-----~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~ 515 (712)
.+|.+|+|=|. .+|+.++. ++.|. .+|.. .. ++... ++++|++-| +.+++|+..+
T Consensus 17 ~~G~~y~Fkg~-------~~wr~~~~~p~~Is~~Wp---glp~~-ID-Aaf~~~~~~~yfFkG-------~~yw~y~~~~ 77 (192)
T d1qhua1 17 DNGTMLFFKDE-------FVWKSHRGIRELISERWK---NFIGP-VD-AAFRHGHTSVYLIKG-------DKVWVYTSEK 77 (192)
T ss_dssp TTSCEEEEETT-------EEEETTTTEEEEHHHHST---TCCSC-CS-EEEEETTTEEEEEET-------TEEEEECC--
T ss_pred CCCcEEEEeCC-------EEEEcCCCCeeEHhhhcC---CCCCC-cc-EEEEcCCCcEEEEeC-------CEEEEEeCCc
Confidence 57899998662 34444322 22343 33422 22 22223 679999987 4578887544
Q ss_pred Cee---EEeC----CCCCCCcceEEEE------ECCEEEEEcCCCCCCccceEEEEeCCCCcEEEc--CCCCCCccceEE
Q psy14726 516 NQW---TLIE----PMRHRRSGVSCIA------YHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQV--PDMYNPRSNFAI 580 (712)
Q Consensus 516 ~~W---~~~~----~~p~~r~~~~~~~------~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~--~~~p~~r~~~~~ 580 (712)
... ..+. .+|. .--++.. .++++|++-| +..++||..+..=..- +.+| .. .++
T Consensus 78 ~~~gyPk~i~~~~~glp~--~iDAA~~~~~~~~~~~~~yfFkg-------~~yw~yd~~~~~~~~~~w~gip--~~-daA 145 (192)
T d1qhua1 78 NEKVYPKSLQDEFPGIPF--PLDAAVECHRGECQDEGILFFQG-------NRKWFWDLTTGTKKERSWPAVG--NC-TSA 145 (192)
T ss_dssp -----CEEHHHHSTTCCS--SCCEEEEECBBTBSSSEEEEEET-------TEEEEEETTTTEEEEECCTTSC--CC-SEE
T ss_pred cccCCCcChHHhCCCCCC--CceEEEEccccccCCCeEEEEeC-------CeEEEEeCCCCCcccccccCcC--Cc-cee
Confidence 332 1221 2221 1122332 2789999987 5679999887631111 2222 22 344
Q ss_pred EEECCEEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 581 EVIDDMIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 581 ~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
+..++++|+|-|. ..++||..+.+
T Consensus 146 ~~~~g~~YfFkg~-------~y~r~~~~~~~ 169 (192)
T d1qhua1 146 LRWLGRYYCFQGN-------QFLRFNPVSGE 169 (192)
T ss_dssp EEETTEEEEEETT-------EEEEECTTTCC
T ss_pred EEeCCcEEEEECC-------EEEEEcCCcce
Confidence 5669999999663 67899988764
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.45 E-value=3.2 Score=37.24 Aligned_cols=188 Identities=13% Similarity=0.108 Sum_probs=94.1
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA 475 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 475 (712)
++..++.||.++ .+..+|..+.+-... +........+...++++++.||.+ ..+..++..++......
T Consensus 24 d~~~l~sgs~Dg-----~i~vWd~~~~~~~~~--l~~H~~~V~~v~~~~~~l~s~s~D-----~~i~~~~~~~~~~~~~~ 91 (293)
T d1p22a2 24 DDQKIVSGLRDN-----TIKIWDKNTLECKRI--LTGHTGSVLCLQYDERVIITGSSD-----STVRVWDVNTGEMLNTL 91 (293)
T ss_dssp CSSEEEEEESSS-----CEEEEESSSCCEEEE--ECCCSSCEEEEECCSSEEEEEETT-----SCEEEEESSSCCEEEEE
T ss_pred cCCEEEEEeCCC-----eEEEEECCCCcEEEE--EecCCCCEeeeecccceeeccccc-----ccccccccccccccccc
Confidence 666777887653 478889887764332 222222233445688888888754 35788888877765443
Q ss_pred cCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCe-eEEeCCCCCCCcc-eEEEEECCEEEEEcCCCCCCccc
Q psy14726 476 PMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQ-WTLIEPMRHRRSG-VSCIAYHECIYVIGGFNGMSRMC 553 (712)
Q Consensus 476 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~ 553 (712)
..... ............+.++.. ..+..+|..+.. ............. .........++..++ + .
T Consensus 92 ~~~~~--~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~-d-----~ 158 (293)
T d1p22a2 92 IHHCE--AVLHLRFNNGMMVTCSKD-----RSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASG-D-----R 158 (293)
T ss_dssp CCCCS--CEEEEECCTTEEEEEETT-----SCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEET-T-----S
T ss_pred ccccc--ccccccccccceeecccc-----cceeEeeccccccccccccccccccccccceecccccccccC-C-----C
Confidence 32211 111222222233333322 234555555433 1111111111222 222233445544443 2 4
Q ss_pred eEEEEeCCCCcEEEcCCCCCCccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeEEEc
Q psy14726 554 NGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 554 ~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
.+..||..+.+-... +............++..++.|+.++ .+.+||+.+..-...
T Consensus 159 ~i~~~d~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~ 213 (293)
T d1p22a2 159 TIKVWNTSTCEFVRT--LNGHKRGIACLQYRDRLVVSGSSDN-----TIRLWDIECGACLRV 213 (293)
T ss_dssp EEEEEETTTCCEEEE--EECCSSCEEEEEEETTEEEEEETTS-----CEEEEETTTCCEEEE
T ss_pred ceeeecCCCCcEEEE--EcccccccccccCCCCeEEEecCCC-----EEEEEecccceeeee
Confidence 678888877653322 1111122233344555667777665 467888887665443
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=91.21 E-value=0.86 Score=43.34 Aligned_cols=153 Identities=9% Similarity=-0.071 Sum_probs=84.9
Q ss_pred CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEE
Q psy14726 443 HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTL 520 (712)
Q Consensus 443 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 520 (712)
+|+.+++++. ..+++||..++....++. ..+. ..+.. +|+..+++|..+. ..+.++|.+++.-..
T Consensus 14 dG~~~a~~~~------g~v~v~d~~~~~~~~~~~--~~~v--~~~~~spDg~~l~~~~~~~g---~~v~v~d~~~~~~~~ 80 (360)
T d1k32a3 14 DGDLIAFVSR------GQAFIQDVSGTYVLKVPE--PLRI--RYVRRGGDTKVAFIHGTREG---DFLGIYDYRTGKAEK 80 (360)
T ss_dssp GGGCEEEEET------TEEEEECTTSSBEEECSC--CSCE--EEEEECSSSEEEEEEEETTE---EEEEEEETTTCCEEE
T ss_pred CCCEEEEEEC------CeEEEEECCCCcEEEccC--CCCE--EEEEECCCCCEEEEEEcCCC---CEEEEEECCCCcEEE
Confidence 4555555432 367888888887776632 2222 23333 7776666554321 358899999988777
Q ss_pred eCCCCCCCcceEEE-EECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEECCEEEEEcccCCC---
Q psy14726 521 IEPMRHRRSGVSCI-AYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGV--- 596 (712)
Q Consensus 521 ~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~--- 596 (712)
+...+.. -.+++ .-+++.+++++.+ ..++.++..+.+...+...........+..-+++.+++++....
T Consensus 81 ~~~~~~~--v~~~~~spdg~~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~ 153 (360)
T d1k32a3 81 FEENLGN--VFAMGVDRNGKFAVVANDR-----FEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGET 153 (360)
T ss_dssp CCCCCCS--EEEEEECTTSSEEEEEETT-----SEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTT
T ss_pred eeCCCce--EEeeeecccccccceeccc-----cccccccccccceeeeeecccccccchhhccceeeeeeeccccccce
Confidence 6542222 12222 2256655665542 56888999887765553332222222222235666655443221
Q ss_pred --ceeeeEEEEECCCCeEEEc
Q psy14726 597 --TTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 597 --~~~~~v~~yd~~~~~W~~~ 615 (712)
.....+.+||..+++=..+
T Consensus 154 ~~~~~~~~~v~d~~~~~~~~~ 174 (360)
T d1k32a3 154 DGYVMQAIHVYDMEGRKIFAA 174 (360)
T ss_dssp CSCCEEEEEEEETTTTEEEEC
T ss_pred eeccccceeeeccccCceeee
Confidence 2334688999988764444
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=91.18 E-value=4.1 Score=40.26 Aligned_cols=183 Identities=9% Similarity=-0.050 Sum_probs=98.4
Q ss_pred ceEEEEECCCCcEEEeCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE-
Q psy14726 412 NSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL- 489 (712)
Q Consensus 412 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~- 489 (712)
..+..+|..+++-... ++....-|+++. -+|+..++++.+ ..+..+|..+.+-..+..++........+.-
T Consensus 42 g~v~v~D~~t~~v~~~--~~~g~~~~~v~fSpDG~~l~~~s~d-----g~v~~~d~~t~~~~~~~~i~~~~~~~~~~~s~ 114 (432)
T d1qksa2 42 GQIALIDGSTYEIKTV--LDTGYAVHISRLSASGRYLFVIGRD-----GKVNMIDLWMKEPTTVAEIKIGSEARSIETSK 114 (432)
T ss_dssp TEEEEEETTTCCEEEE--EECSSCEEEEEECTTSCEEEEEETT-----SEEEEEETTSSSCCEEEEEECCSEEEEEEECC
T ss_pred CEEEEEECCCCcEEEE--EeCCCCeeEEEECCCCCEEEEEcCC-----CCEEEEEeeCCCceEEEEEecCCCCCCeEEec
Confidence 4688889888876433 223334455554 355443444432 4688999888776555555544333333221
Q ss_pred ----CC-EEEEEcccCCCCccCceEEeeCCCCeeEEeCCC-----------CCCCcceEEEEECC-EEEEEcCCCCCCcc
Q psy14726 490 ----QG-KIYITGGFNGHNCLNSCEVYDPECNQWTLIEPM-----------RHRRSGVSCIAYHE-CIYVIGGFNGMSRM 552 (712)
Q Consensus 490 ----~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-----------p~~r~~~~~~~~~~-~iyv~GG~~~~~~~ 552 (712)
+| .+|+.+..+ .++..+|.++++-...... +.++....+...++ .+++.... .
T Consensus 115 ~~SpDG~~l~vs~~~~-----~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~-----~ 184 (432)
T d1qksa2 115 MEGWEDKYAIAGAYWP-----PQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKE-----T 184 (432)
T ss_dssp STTCTTTEEEEEEEET-----TEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETT-----T
T ss_pred ccCCCCCEEEEEcCCC-----CeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEcc-----C
Confidence 44 577766543 4688899988876544211 22232222222333 44444432 3
Q ss_pred ceEEEEeCCCCcEEEcCCCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCeEEEc
Q psy14726 553 CNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 553 ~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
..+..+|..+.+-..+..++....-+.++.. +++.++++..+ .+.+.+.|..+.+....
T Consensus 185 ~~i~~~d~~~~~~~~~~~i~~g~~~~~~~~spdg~~~~va~~~----~~~v~v~d~~~~~~~~~ 244 (432)
T d1qksa2 185 GKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANA----RNKLVVIDTKEGKLVAI 244 (432)
T ss_dssp TEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGG----GTEEEEEETTTTEEEEE
T ss_pred CeEEEEEccCCCcceEEEEcccCccccceECCCCCEEEEeccc----cceEEEeecccceEEEE
Confidence 5778888776554444444444444555444 45543333322 23577778777665433
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=91.14 E-value=1.5 Score=41.45 Aligned_cols=170 Identities=11% Similarity=-0.057 Sum_probs=91.9
Q ss_pred ceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--
Q psy14726 412 NSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL-- 489 (712)
Q Consensus 412 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-- 489 (712)
..++.+|..++...+++. ..+.......-+|+..+++|.... ..+++||..+++-..+..-+. ...+..+
T Consensus 24 g~v~v~d~~~~~~~~~~~--~~~v~~~~~spDg~~l~~~~~~~g---~~v~v~d~~~~~~~~~~~~~~---~v~~~~~sp 95 (360)
T d1k32a3 24 GQAFIQDVSGTYVLKVPE--PLRIRYVRRGGDTKVAFIHGTREG---DFLGIYDYRTGKAEKFEENLG---NVFAMGVDR 95 (360)
T ss_dssp TEEEEECTTSSBEEECSC--CSCEEEEEECSSSEEEEEEEETTE---EEEEEEETTTCCEEECCCCCC---SEEEEEECT
T ss_pred CeEEEEECCCCcEEEccC--CCCEEEEEECCCCCEEEEEEcCCC---CEEEEEECCCCcEEEeeCCCc---eEEeeeecc
Confidence 367888888888877643 334333333447776666554322 358999999988776543221 1122223
Q ss_pred CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCC-----CCccceEEEEeCCCCc
Q psy14726 490 QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNG-----MSRMCNGEKYNPVTKT 564 (712)
Q Consensus 490 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~-----~~~~~~v~~yd~~~~~ 564 (712)
+++.++.++.+ ..+..++..+.+...+...........+..-+++.+++++... ......+..+|..+.+
T Consensus 96 dg~~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~ 170 (360)
T d1k32a3 96 NGKFAVVANDR-----FEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK 170 (360)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred cccccceeccc-----cccccccccccceeeeeecccccccchhhccceeeeeeeccccccceeeccccceeeeccccCc
Confidence 66666666654 3578888888776555433333333333334666555544221 1223467889988775
Q ss_pred EEEcCCCCCCccceEEEEECCEEEEEcccCC
Q psy14726 565 WSQVPDMYNPRSNFAIEVIDDMIFAIGGFNG 595 (712)
Q Consensus 565 W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~ 595 (712)
=..+...... ....+..-+++.+++++.++
T Consensus 171 ~~~~~~~~~~-~~~~~~spdg~~l~~~s~~~ 200 (360)
T d1k32a3 171 IFAATTENSH-DYAPAFDADSKNLYYLSYRS 200 (360)
T ss_dssp EEECSCSSSB-EEEEEECTTSCEEEEEESCC
T ss_pred eeeecccccc-cccccccCCCCEEEEEeCCC
Confidence 4444332211 11111222566556665443
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=90.87 E-value=2.1 Score=39.17 Aligned_cols=147 Identities=6% Similarity=0.029 Sum_probs=67.3
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEE-CCeEEEEcccCCCCCCceeEEeecCCCceEEc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH-HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 474 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 474 (712)
++.+++.||.+ ..+..||..+++....-..... .-.+++.. ++.+++.++.. ..+..++.........
T Consensus 28 ~~~~l~s~s~D-----g~i~iWd~~~~~~~~~~~~h~~-~V~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 96 (317)
T d1vyhc1 28 VFSVMVSASED-----ATIKVWDYETGDFERTLKGHTD-SVQDISFDHSGKLLASCSAD-----MTIKLWDFQGFECIRT 96 (317)
T ss_dssp SSSEEEEEESS-----SCEEEEETTTCCCCEEECCCSS-CEEEEEECTTSSEEEEEETT-----SCCCEEETTSSCEEEC
T ss_pred CCCEEEEEeCC-----CeEEEEECCCCCEEEEEeCCCC-cEEEEeeecccccccccccc-----cccccccccccccccc
Confidence 45667777754 3588889887764322111111 11222222 44555555432 2344455554444332
Q ss_pred ccCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--CCEEEEEcCCCCCCcc
Q psy14726 475 APMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRM 552 (712)
Q Consensus 475 ~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~ 552 (712)
-..............++..++.++.+ ..+..+|..+.+....-... ......+.. ++.+++.|+.+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~d-----~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~d----- 164 (317)
T d1vyhc1 97 MHGHDHNVSSVSIMPNGDHIVSASRD-----KTIKMWEVQTGYCVKTFTGH--REWVRMVRPNQDGTLIASCSND----- 164 (317)
T ss_dssp CCCCSSCEEEEEECSSSSEEEEEETT-----SEEEEEETTTCCEEEEEECC--SSCEEEEEECTTSSEEEEEETT-----
T ss_pred cccccccceeeeccCCCceEEeeccC-----cceeEeecccceeeeEEccC--CCcceeeecccCCCEEEEEeCC-----
Confidence 22111111111111245555566544 35677888777654332111 112222222 45666666654
Q ss_pred ceEEEEeCCCCcE
Q psy14726 553 CNGEKYNPVTKTW 565 (712)
Q Consensus 553 ~~v~~yd~~~~~W 565 (712)
..+..+|..+.+.
T Consensus 165 ~~v~~~~~~~~~~ 177 (317)
T d1vyhc1 165 QTVRVWVVATKEC 177 (317)
T ss_dssp SCEEEEETTTCCE
T ss_pred CeEEEEeecccee
Confidence 3456666665543
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=90.58 E-value=0.96 Score=42.62 Aligned_cols=155 Identities=12% Similarity=0.058 Sum_probs=79.6
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEE-CC-eEEEEcccCCCCCCceeEEeecCCCceEE
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH-HD-VIYAMGGYNGQRRQNSVEKYNYTENQWSL 473 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 473 (712)
+++.+++|+.+ +.+..||..+++-...-.++....-.+++.. +| .+|+.|..+ +.+..||..+.+=..
T Consensus 7 ~~~~l~~~~~~-----~~v~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~-----~~v~~~d~~t~~~~~ 76 (346)
T d1jmxb_ 7 GHEYMIVTNYP-----NNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY-----GDIYGIDLDTCKNTF 76 (346)
T ss_dssp TCEEEEEEETT-----TEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEE
T ss_pred CCcEEEEEcCC-----CEEEEEECCCCCEEEEEEcCCCCCcceEEECCCCCEEEEEECCC-----CcEEEEeCccCeeee
Confidence 56777777753 4799999999986544344444444455553 44 577776532 578999988775332
Q ss_pred cccCCccc-----cceeEEEE--CCEEEEEcccCCC------CccCceEEeeCCCCeeEEe-CCCCCCCc-ceEEEEECC
Q psy14726 474 IAPMNVER-----SDASATTL--QGKIYITGGFNGH------NCLNSCEVYDPECNQWTLI-EPMRHRRS-GVSCIAYHE 538 (712)
Q Consensus 474 ~~~~p~~r-----~~~~~~~~--~~~iyv~GG~~~~------~~~~~v~~yd~~~~~W~~~-~~~p~~r~-~~~~~~~~~ 538 (712)
........ .-..++.- +..+|+.+..... .....+..+|..+++-... ...+.+.. ......-++
T Consensus 77 ~~~~~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (346)
T d1jmxb_ 77 HANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDG 156 (346)
T ss_dssp EEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTS
T ss_pred eecccccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeeeccCceEEEEecCCC
Confidence 21211111 11122222 3467776542210 1224456666665442111 11111111 122233356
Q ss_pred EEEEEcCCCCCCccceEEEEeCCCCcEEEc
Q psy14726 539 CIYVIGGFNGMSRMCNGEKYNPVTKTWSQV 568 (712)
Q Consensus 539 ~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 568 (712)
++|+.++ .+..+|..+.+....
T Consensus 157 ~~~~~~~--------~~~~~~~~~~~~~~~ 178 (346)
T d1jmxb_ 157 SLYVAGP--------DIYKMDVKTGKYTVA 178 (346)
T ss_dssp CEEEESS--------SEEEECTTTCCEEEE
T ss_pred EEEEeCC--------cceEEEccCCCEEEE
Confidence 7777764 456677766665543
|
| >d1gena_ b.66.1.1 (A:) Gelatinase A (MMP-2), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 4-bladed beta-propeller superfamily: Hemopexin-like domain family: Hemopexin-like domain domain: Gelatinase A (MMP-2), C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.58 E-value=2.6 Score=36.84 Aligned_cols=143 Identities=12% Similarity=0.103 Sum_probs=76.6
Q ss_pred EEEEECCeEEEEcccCCCCCCceeEEeecCCCceE---Ec----ccCCccccceeEEEE--CCEEEEEcccCCCCccCce
Q psy14726 438 STAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWS---LI----APMNVERSDASATTL--QGKIYITGGFNGHNCLNSC 508 (712)
Q Consensus 438 ~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~---~~----~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v 508 (712)
+++.++|.+|+|=| +.+|+++.....+. .+ +.+|.. .. +|... ++++|.+-| +..
T Consensus 17 Av~~~~G~~y~Fkg-------~~~wr~~~~~~~~~~P~~I~~~w~glp~~-Id-AA~~~~~~~~~yffkg-------~~~ 80 (200)
T d1gena_ 17 GIAQIRGEIFFFKD-------RFIWRTVTPRDKPMGPLLVATFWPELPEK-ID-AVYEAPQEEKAVFFAG-------NEY 80 (200)
T ss_dssp EEEEETTEEEEEET-------TEEEEESSTTSCCEEEEEGGGTCTTSCSC-CS-EEEEETTTTEEEEEET-------TEE
T ss_pred EEEecCCeEEEEeC-------CEEEEEcCCCCCCCCcEehhhccCCCCCC-ce-EEEEECCCCeEEEecC-------ceE
Confidence 66778999999966 34555443322221 11 123322 12 22222 678998877 457
Q ss_pred EEeeCCCCee---EEeCC--CCCCCcce-EEEE--ECCEEEEEcCCCCCCccceEEEEeCCCCcEE-----Ec----CCC
Q psy14726 509 EVYDPECNQW---TLIEP--MRHRRSGV-SCIA--YHECIYVIGGFNGMSRMCNGEKYNPVTKTWS-----QV----PDM 571 (712)
Q Consensus 509 ~~yd~~~~~W---~~~~~--~p~~r~~~-~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~-----~~----~~~ 571 (712)
++|+-.+... ..+.. +|...... ++.. .++++|++-| +..++||..+++=. .+ +.+
T Consensus 81 ~~y~~~~~~~gyPk~i~~~g~p~~~~~iDAA~~~~~~g~~YfFkg-------~~y~ryd~~~~~vd~~yPk~I~~~w~gv 153 (200)
T d1gena_ 81 WIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG-------DKFWRYNEVKKKMDPGFPKLIADAWNAI 153 (200)
T ss_dssp EEEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCCEEHHHHSSSC
T ss_pred EEEcCcccccCCCceehhcCCCCCccceeeEEEECCCCeEEEEeC-------cEEEEeccccceeccCcceehhhccCCC
Confidence 7776432111 11211 22221222 2333 2689999988 57899998776421 11 223
Q ss_pred CCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCeE
Q psy14726 572 YNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEW 612 (712)
Q Consensus 572 p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 612 (712)
|. .-.++... ++++|++-|. ..+.||..+.+.
T Consensus 154 p~--~idAAf~~~~~g~~Yff~g~-------~y~r~d~~~~~~ 187 (200)
T d1gena_ 154 PD--NLDAVVDLQGGGHSYFFKGA-------YYLKLENQSLKS 187 (200)
T ss_dssp CS--SCSEEEECTTTCEEEEEETT-------EEEEEETTEEEE
T ss_pred CC--CccEEEEecCCCEEEEEECC-------EEEEEECCceEE
Confidence 32 22344443 6899999663 568888765443
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=88.43 E-value=9.7 Score=35.31 Aligned_cols=142 Identities=13% Similarity=0.083 Sum_probs=71.6
Q ss_pred eEEEEcccCCCCCCceeEEeecCCCceEE-cccCCccccceeEEEE---CCEEEEEcccCCCCccCceEEeeCCCCeeEE
Q psy14726 445 VIYAMGGYNGQRRQNSVEKYNYTENQWSL-IAPMNVERSDASATTL---QGKIYITGGFNGHNCLNSCEVYDPECNQWTL 520 (712)
Q Consensus 445 ~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 520 (712)
.+++.||.+ ..+..||..+.+-.. ..........-.++.+ .+.+++.||.++ .+..||..+++...
T Consensus 173 ~~~~~~~~d-----~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~-----~i~iwd~~~~~~~~ 242 (325)
T d1pgua1 173 MRSMTVGDD-----GSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDR-----KISCFDGKSGEFLK 242 (325)
T ss_dssp CEEEEEETT-----TEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTC-----CEEEEETTTCCEEE
T ss_pred ceEEEeecc-----cccccccccccccceecccccCCCCccEEeeeccccceecccccccc-----ceeeeeeccccccc
Confidence 455666643 357778765543222 2222111121223333 357788787664 58889988776433
Q ss_pred -eCCCCCCC--cceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEc---CCCCCCccceEEEEECCEEEEEcccC
Q psy14726 521 -IEPMRHRR--SGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQV---PDMYNPRSNFAIEVIDDMIFAIGGFN 594 (712)
Q Consensus 521 -~~~~p~~r--~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~---~~~p~~r~~~~~~~~~~~i~v~GG~~ 594 (712)
+.....+. ..++....+++.++.||.+ ..+..||..+++-... ..........++..-++..++.||.+
T Consensus 243 ~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d 317 (325)
T d1pgua1 243 YIEDDQEPVQGGIFALSWLDSQKFATVGAD-----ATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLD 317 (325)
T ss_dssp ECCBTTBCCCSCEEEEEESSSSEEEEEETT-----SEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETT
T ss_pred cccccccccccceeeeeccCCCEEEEEeCC-----CeEEEEECCCCCEEEEEEecCCcccCeEEEEEECCCCEEEEEECC
Confidence 22111121 2233333567777777765 4688899988764322 11111111122232344455667766
Q ss_pred CCceeeeEEEEE
Q psy14726 595 GVTTIYHVECYD 606 (712)
Q Consensus 595 ~~~~~~~v~~yd 606 (712)
+ .+.+||
T Consensus 318 g-----~i~vwd 324 (325)
T d1pgua1 318 G-----TLNFYE 324 (325)
T ss_dssp S-----CEEEEE
T ss_pred C-----EEEEEE
Confidence 5 456665
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=86.79 E-value=3.3 Score=42.72 Aligned_cols=119 Identities=12% Similarity=0.141 Sum_probs=74.2
Q ss_pred EEEEECCeEEEEcccCCCCCCceeEEeecCCCc--eEEcccCC--------ccccceeEEEECCEEEEEcccCCCCccCc
Q psy14726 438 STAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQ--WSLIAPMN--------VERSDASATTLQGKIYITGGFNGHNCLNS 507 (712)
Q Consensus 438 ~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p--------~~r~~~~~~~~~~~iyv~GG~~~~~~~~~ 507 (712)
+=++.+|+||+..+. ..++.+|..|.+ |+.-+..+ ......+.+..+++||+... -..
T Consensus 61 tPiv~~g~vyv~t~~------~~v~AlDa~tG~~lW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~------~g~ 128 (560)
T d1kv9a2 61 TPLFHDGVIYTSMSW------SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL------DGR 128 (560)
T ss_dssp CCEEETTEEEEEEGG------GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT------TSE
T ss_pred CCEEECCEEEEECCC------CeEEEEeCCCCCEEEEECCCCCccccccccccccccCcceeCCeEEEEeC------CCE
Confidence 346889999997543 578889988864 87533222 11223355667888887643 245
Q ss_pred eEEeeCCCCe--eEEeCCCC-CC-CcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCc--EEEc
Q psy14726 508 CEVYDPECNQ--WTLIEPMR-HR-RSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKT--WSQV 568 (712)
Q Consensus 508 v~~yd~~~~~--W~~~~~~p-~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~ 568 (712)
+..+|..+++ |+....-+ .. ....+-.++++.+++-+..........+..||..|.+ |+.-
T Consensus 129 l~Alda~tG~~~w~~~~~~~~~~~~~~~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~ 195 (560)
T d1kv9a2 129 LIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (560)
T ss_dssp EEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEEECCCCcEEeccCccCcccceeeeeeeeeecCcccccccceeccccceEEEEECCCceEEeeee
Confidence 8899988875 87654222 11 2233446678888765443333344679999999874 6643
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=86.54 E-value=11 Score=33.81 Aligned_cols=223 Identities=14% Similarity=0.044 Sum_probs=110.5
Q ss_pred CceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEE
Q psy14726 347 HEILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWK 425 (712)
Q Consensus 347 ~~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~ 425 (712)
.+.+|+..... ...+..+++....-......... ..+++++. ++.||+.... ...+..++..+..+.
T Consensus 24 dG~i~v~~~~~----~~~i~~~~~~~~~~~~~~~~~~~---~p~gvav~~~g~i~v~d~~-----~~~i~~~~~~~~~~~ 91 (260)
T d1rwia_ 24 AGNVYVTSEGM----YGRVVKLATGSTGTTVLPFNGLY---QPQGLAVDGAGTVYVTDFN-----NRVVTLAAGSNNQTV 91 (260)
T ss_dssp TCCEEEEECSS----SCEEEEEC----CEEECCCCSCC---SCCCEEECTTCCEEEEETT-----TEEEEECTTCSCCEE
T ss_pred CCCEEEEEcCC----CCEEEEEcCCCceEEEeccCCcc---CceEEEEcCCCCEEEeeee-----eceeeeeeeccceee
Confidence 35567664422 23455666555443332122111 12344544 6788877542 123444444444443
Q ss_pred EeCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcc--cCCccccceeEEE-ECCEEEEEcccCC
Q psy14726 426 EIAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA--PMNVERSDASATT-LQGKIYITGGFNG 501 (712)
Q Consensus 426 ~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~-~~~~iyv~GG~~~ 501 (712)
..........++++ .+++||+..- ..+.+..+++......... .+..++ +.+. -++++|+....+
T Consensus 92 --~~~~~~~~p~~iavd~~g~i~v~d~-----~~~~~~~~~~~~~~~~~~~~~~~~~p~---~i~~~~~g~~~v~~~~~- 160 (260)
T d1rwia_ 92 --LPFDGLNYPEGLAVDTQGAVYVADR-----GNNRVVKLAAGSKTQTVLPFTGLNDPD---GVAVDNSGNVYVTDTDN- 160 (260)
T ss_dssp --CCCCSCCSEEEEEECTTCCEEEEEG-----GGTEEEEECTTCSSCEECCCCSCCSCC---EEEECTTCCEEEEEGGG-
T ss_pred --eeeeeeeecccccccccceeEeecc-----ccccccccccccceeeeeeecccCCcc---eeeecCCCCEeeecccc-
Confidence 22222233344554 4678988632 1245777777665433322 222221 2222 266788875422
Q ss_pred CCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEE
Q psy14726 502 HNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAI 580 (712)
Q Consensus 502 ~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~ 580 (712)
..+.+||++.+......... ...-.++++- +|.||+..-. ...+.+|++.....+....-.. ..-+++
T Consensus 161 ----~~i~~~d~~~~~~~~~~~~~-~~~p~gi~~d~~g~l~vsd~~-----~~~i~~~~~~~~~~~~~~~~~~-~~P~~i 229 (260)
T d1rwia_ 161 ----NRVVKLEAESNNQVVLPFTD-ITAPWGIAVDEAGTVYVTEHN-----TNQVVKLLAGSTTSTVLPFTGL-NTPLAV 229 (260)
T ss_dssp ----TEEEEECTTTCCEEECCCSS-CCSEEEEEECTTCCEEEEETT-----TTEEEEECTTCSCCEECCCCSC-CCEEEE
T ss_pred ----ccccccccccceeeeeeccc-cCCCccceeeeeeeeeeeecC-----CCEEEEEeCCCCeEEEEccCCC-CCeEEE
Confidence 46889999877655543211 1222344442 5789987532 3578999998877666643221 112344
Q ss_pred EEE-CCEEEEEcccCCCceeeeEEEEECC
Q psy14726 581 EVI-DDMIFAIGGFNGVTTIYHVECYDEK 608 (712)
Q Consensus 581 ~~~-~~~i~v~GG~~~~~~~~~v~~yd~~ 608 (712)
++- ++.|||.-..+ +.|.++++.
T Consensus 230 ~~d~~g~l~vad~~~-----~rI~~i~~~ 253 (260)
T d1rwia_ 230 AVDSDRTVYVADRGN-----DRVVKLTSL 253 (260)
T ss_dssp EECTTCCEEEEEGGG-----TEEEEECCC
T ss_pred EEeCCCCEEEEECCC-----CEEEEEeCC
Confidence 443 56888873221 256666543
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=85.98 E-value=3.8 Score=38.59 Aligned_cols=152 Identities=7% Similarity=0.021 Sum_probs=84.0
Q ss_pred CCeEEEEcccCCCCCCceeEEeecCCCceEEc-ccCCccccceeEEEE-CCEEEEEcccCCCCccCceEEeeCCCCeeEE
Q psy14726 443 HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI-APMNVERSDASATTL-QGKIYITGGFNGHNCLNSCEVYDPECNQWTL 520 (712)
Q Consensus 443 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 520 (712)
+|.||+..- ....++++||.++..... .+... .-++++.- +|++||..-.+ ......+..++..+.....
T Consensus 50 ~G~Ly~~D~-----~~g~I~ri~p~g~~~~~~~~~~~~--~p~gla~~~dG~l~va~~~~-~~~~~~i~~~~~~~~~~~~ 121 (319)
T d2dg1a1 50 QGQLFLLDV-----FEGNIFKINPETKEIKRPFVSHKA--NPAAIKIHKDGRLFVCYLGD-FKSTGGIFAATENGDNLQD 121 (319)
T ss_dssp TSCEEEEET-----TTCEEEEECTTTCCEEEEEECSSS--SEEEEEECTTSCEEEEECTT-SSSCCEEEEECTTSCSCEE
T ss_pred CCCEEEEEC-----CCCEEEEEECCCCeEEEEEeCCCC--CeeEEEECCCCCEEEEecCC-CccceeEEEEcCCCceeee
Confidence 567888732 235799999998865443 22221 12333333 78999874211 1223568888888877655
Q ss_pred eC-CCCCC-CcceEEEEECCEEEEEcCCC-CCCccceEEEEeCCCCcEEEcC-CCCCCccceEEEEE--CCEEEEEcccC
Q psy14726 521 IE-PMRHR-RSGVSCIAYHECIYVIGGFN-GMSRMCNGEKYNPVTKTWSQVP-DMYNPRSNFAIEVI--DDMIFAIGGFN 594 (712)
Q Consensus 521 ~~-~~p~~-r~~~~~~~~~~~iyv~GG~~-~~~~~~~v~~yd~~~~~W~~~~-~~p~~r~~~~~~~~--~~~i~v~GG~~ 594 (712)
.. ..... +..-.++.-+|.+|+..-.. .......++++++....++.+. .+..+ .+++.- ++.||+.--
T Consensus 122 ~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~~~~~~~~~~~p---nGia~s~dg~~lyvad~-- 196 (319)
T d2dg1a1 122 IIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVA---NGIALSTDEKVLWVTET-- 196 (319)
T ss_dssp EECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSE---EEEEECTTSSEEEEEEG--
T ss_pred eccCCCcccCCcceeEEeccceeecccccccccCcceeEEEecccceeEEEeecccee---eeeeeccccceEEEecc--
Confidence 43 22222 22222333368888864321 1223567899999887777653 22222 233332 446888732
Q ss_pred CCceeeeEEEEECCCC
Q psy14726 595 GVTTIYHVECYDEKTD 610 (712)
Q Consensus 595 ~~~~~~~v~~yd~~~~ 610 (712)
..+.+++||...+
T Consensus 197 ---~~~~I~~~d~~~~ 209 (319)
T d2dg1a1 197 ---TANRLHRIALEDD 209 (319)
T ss_dssp ---GGTEEEEEEECTT
T ss_pred ---cCCceEEEEEcCC
Confidence 2246888886543
|
| >d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Comamonas testosteroni [TaxId: 285]
Probab=85.35 E-value=4.7 Score=41.58 Aligned_cols=116 Identities=11% Similarity=0.197 Sum_probs=71.6
Q ss_pred EEECCeEEEEcccCCCCCCceeEEeecCCCc--eEEcccCC--------ccccceeEEEECCEEEEEcccCCCCccCceE
Q psy14726 440 AVHHDVIYAMGGYNGQRRQNSVEKYNYTENQ--WSLIAPMN--------VERSDASATTLQGKIYITGGFNGHNCLNSCE 509 (712)
Q Consensus 440 ~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p--------~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~ 509 (712)
++.+|+||+.... +.++.+|..|.+ |+.-+..+ ......+.+..++++|+... -..+.
T Consensus 74 iv~~g~vyv~t~~------~~v~AlDa~TG~~~W~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~t~------~g~l~ 141 (573)
T d1kb0a2 74 VVVDGIMYVSASW------SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW------DGRLI 141 (573)
T ss_dssp EEETTEEEEECGG------GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT------TSEEE
T ss_pred EEECCEEEEECCC------CeEEEEeCCCCCeEEEeCCCCCcccccccccccccccceEECCcEEEEec------cccee
Confidence 5679999997643 568889988864 87543222 11222355667889887542 24588
Q ss_pred EeeCCCCe--eEEeC-CCCCC--CcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCc--EEE
Q psy14726 510 VYDPECNQ--WTLIE-PMRHR--RSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKT--WSQ 567 (712)
Q Consensus 510 ~yd~~~~~--W~~~~-~~p~~--r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~ 567 (712)
++|..+++ |+.-. ..+.. ....+.+++++.+|+-+..........|..||..|.+ |+.
T Consensus 142 alda~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~ 206 (573)
T d1kb0a2 142 ALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRW 206 (573)
T ss_dssp EEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred eeccccccceecccCccCCcceEEeecceEEEeccEEEeeccccccccceEEEEecCCccceeee
Confidence 89988876 87643 22221 1223346678888764332222334689999999875 764
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=84.97 E-value=15 Score=33.93 Aligned_cols=107 Identities=17% Similarity=0.197 Sum_probs=59.9
Q ss_pred EEEEEcccCCCCccCceEEeeCCCCeeEE-eCCCCCCCcceEEEEE---CCEEEEEcCCCCCCccceEEEEeCCCCcEEE
Q psy14726 492 KIYITGGFNGHNCLNSCEVYDPECNQWTL-IEPMRHRRSGVSCIAY---HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQ 567 (712)
Q Consensus 492 ~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 567 (712)
.+++.||.++ .+..||..+.+-.. ............++.+ .+.+++.||.+ ..+..||..+++...
T Consensus 173 ~~~~~~~~d~-----~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d-----~~i~iwd~~~~~~~~ 242 (325)
T d1pgua1 173 MRSMTVGDDG-----SVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSD-----RKISCFDGKSGEFLK 242 (325)
T ss_dssp CEEEEEETTT-----EEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETT-----CCEEEEETTTCCEEE
T ss_pred ceEEEeeccc-----ccccccccccccceecccccCCCCccEEeeeccccceeccccccc-----cceeeeeeccccccc
Confidence 4566676553 56778876554322 2222222222233333 35677777754 468899998876533
Q ss_pred -cCCCCCC--ccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeEE
Q psy14726 568 -VPDMYNP--RSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWY 613 (712)
Q Consensus 568 -~~~~p~~--r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 613 (712)
+.....+ ...++....+++.++.||.++ .+.+||+.+++-.
T Consensus 243 ~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~-----~i~iwd~~~~~~~ 286 (325)
T d1pgua1 243 YIEDDQEPVQGGIFALSWLDSQKFATVGADA-----TIRVWDVTTSKCV 286 (325)
T ss_dssp ECCBTTBCCCSCEEEEEESSSSEEEEEETTS-----EEEEEETTTTEEE
T ss_pred cccccccccccceeeeeccCCCEEEEEeCCC-----eEEEEECCCCCEE
Confidence 3221111 122333334777888888765 5788999987643
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=84.61 E-value=19 Score=34.96 Aligned_cols=182 Identities=9% Similarity=-0.084 Sum_probs=96.8
Q ss_pred CceEEEEECCCCcEEEcccCCCCCCCcceEEEEE--CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEE
Q psy14726 362 TDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVST 439 (712)
Q Consensus 362 ~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~ 439 (712)
...+..+|..+++-... . +....-|++++. +.++|+ ++.+ ..+..+|..+.+-.....++........
T Consensus 41 ~g~v~v~D~~t~~v~~~--~--~~g~~~~~v~fSpDG~~l~~-~s~d-----g~v~~~d~~t~~~~~~~~i~~~~~~~~~ 110 (432)
T d1qksa2 41 AGQIALIDGSTYEIKTV--L--DTGYAVHISRLSASGRYLFV-IGRD-----GKVNMIDLWMKEPTTVAEIKIGSEARSI 110 (432)
T ss_dssp TTEEEEEETTTCCEEEE--E--ECSSCEEEEEECTTSCEEEE-EETT-----SEEEEEETTSSSCCEEEEEECCSEEEEE
T ss_pred CCEEEEEECCCCcEEEE--E--eCCCCeeEEEECCCCCEEEE-EcCC-----CCEEEEEeeCCCceEEEEEecCCCCCCe
Confidence 45688999998887652 1 122334566555 445554 4432 4688999888765444444433333333
Q ss_pred EEE-----CC-eEEEEcccCCCCCCceeEEeecCCCceEEcccC-----------CccccceeEEEECC-EEEEEcccCC
Q psy14726 440 AVH-----HD-VIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPM-----------NVERSDASATTLQG-KIYITGGFNG 501 (712)
Q Consensus 440 ~~~-----~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-----------p~~r~~~~~~~~~~-~iyv~GG~~~ 501 (712)
+.. +| .+|+.+... ..+..||..+.+-....+. +.+|....+..-++ .+++....
T Consensus 111 ~~s~~~SpDG~~l~vs~~~~-----~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~-- 183 (432)
T d1qksa2 111 ETSKMEGWEDKYAIAGAYWP-----PQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKE-- 183 (432)
T ss_dssp EECCSTTCTTTEEEEEEEET-----TEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETT--
T ss_pred EEecccCCCCCEEEEEcCCC-----CeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEcc--
Confidence 321 45 567765532 5688899988876544221 12221111112233 44444332
Q ss_pred CCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CCE-EEEEcCCCCCCccceEEEEeCCCCcEEEc
Q psy14726 502 HNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HEC-IYVIGGFNGMSRMCNGEKYNPVTKTWSQV 568 (712)
Q Consensus 502 ~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 568 (712)
...+..+|..+.+-..+..++....-+.++.. +++ +|+.++. .+.+...|..+.+....
T Consensus 184 ---~~~i~~~d~~~~~~~~~~~i~~g~~~~~~~~spdg~~~~va~~~-----~~~v~v~d~~~~~~~~~ 244 (432)
T d1qksa2 184 ---TGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANA-----RNKLVVIDTKEGKLVAI 244 (432)
T ss_dssp ---TTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGG-----GTEEEEEETTTTEEEEE
T ss_pred ---CCeEEEEEccCCCcceEEEEcccCccccceECCCCCEEEEeccc-----cceEEEeecccceEEEE
Confidence 24577777766554444434444444444433 444 5555432 35778888877765443
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=84.16 E-value=4.7 Score=37.20 Aligned_cols=101 Identities=8% Similarity=-0.081 Sum_probs=51.5
Q ss_pred ceeEEeecCCCceEEcccCC-ccccceeEEEE-CC-EEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCC----cce
Q psy14726 459 NSVEKYNYTENQWSLIAPMN-VERSDASATTL-QG-KIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRR----SGV 531 (712)
Q Consensus 459 ~~v~~yd~~~~~W~~~~~~p-~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r----~~~ 531 (712)
+.+.+||..+.+-...-+.+ .+..-.+.+.- +| .+||.|+.+ ..|..||..+++....-..+.+. ..+
T Consensus 11 ~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~-----~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~ 85 (337)
T d1pbyb_ 11 DKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKS-----ESLVKIDLVTGETLGRIDLSTPEERVKSLF 85 (337)
T ss_dssp TEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTT-----TEEEEEETTTCCEEEEEECCBTTEEEECTT
T ss_pred CEEEEEECCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCC-----CeEEEEECCCCcEEEEEecCCCccccccee
Confidence 67888998887533222222 22222222222 44 578877544 46999999998765443222211 111
Q ss_pred EEEEE--CCEEEEEcCCC------CCCccceEEEEeCCCCc
Q psy14726 532 SCIAY--HECIYVIGGFN------GMSRMCNGEKYNPVTKT 564 (712)
Q Consensus 532 ~~~~~--~~~iyv~GG~~------~~~~~~~v~~yd~~~~~ 564 (712)
+++.. ++.+|+.+... .......+..+|..+.+
T Consensus 86 ~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 126 (337)
T d1pbyb_ 86 GAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLS 126 (337)
T ss_dssp CEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTE
T ss_pred eEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCe
Confidence 22222 34555554311 01123567788887764
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=81.75 E-value=21 Score=33.23 Aligned_cols=69 Identities=14% Similarity=0.129 Sum_probs=37.5
Q ss_pred CCEEEEEcCCCCC----CccceEEEEeCCCCcEEEcCCCCCCccceEEEEE-CCE--EEEEcccCCCceeeeEEEEECCC
Q psy14726 537 HECIYVIGGFNGM----SRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DDM--IFAIGGFNGVTTIYHVECYDEKT 609 (712)
Q Consensus 537 ~~~iyv~GG~~~~----~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~--i~v~GG~~~~~~~~~v~~yd~~~ 609 (712)
+..+|+.+..... .....+..+|..+.+=.. .++.+....+++.- +|+ +|+.|+.++ .+.+||..+
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~--~~~~~~~~~~~a~spDG~~~l~vt~~~d~-----~v~v~D~~t 350 (373)
T d2madh_ 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSS--QISLGHDVDAISVAQDGGPDLYALSAGTE-----VLHIYDAGA 350 (373)
T ss_pred CCeEEEecCCCceEEeecCCCeEEEEECCCCcEEE--EecCCCCeeEEEECCCCCEEEEEEeCCCC-----eEEEEECCC
Confidence 3456655542211 124578889988774222 22223333344433 444 566666543 689999998
Q ss_pred CeE
Q psy14726 610 DEW 612 (712)
Q Consensus 610 ~~W 612 (712)
++=
T Consensus 351 g~~ 353 (373)
T d2madh_ 351 GDQ 353 (373)
T ss_pred CCE
Confidence 763
|