Psyllid ID: psy14885

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480---
Protein Sequence
MSLISSCLFIFVSFHSVFSQTIDELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRNSNTGFAFIINNENFQYRLPHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGIDNIQQRNNIIQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAKNSINSKLLDFYIQDDLKNHLRKNIVKLYNDQWTNIQNNKLRTIKDNTTLWKTSLRKIRNEEILLTRLRIGHTRITHSYLFTKTPHPICTCGFPLTVKHIFECNKYKKFREKLSLPSIEIALSDNENMAEKTIKYMKMINLYSKV
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHcccccccccccccccccccccEEEEEccccccHHHHHHHHHHccccEEEEccHHHHHHHHHHHccccccccEEEEEEcccccccEEEccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccccccccccccccccccHHHHHHHHHHHHcccccccccccccccccccccccccccccccEEcccccccccccEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHcccccEEEEEcHHHHHHHHHccccccHHHHHHHHHHHHHHcccccEEEEEEcccccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHcccccHHHHccccHHHHHHHHHHHHHHcccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHcHHHHHHccccccccccccHHHHHHHcEEEEccccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHccccccEEEEEEEEcccccEEcccccHHHHHHccccccccHHHccccccccccccccccccccccccccEEEEEEcccccccccEcccccccEEEEEEccHHHHEEEccccccccccEccccHHHcccccccccccEEEEEccccccccEEEEEEEcccEEEEccccccHHHHHHHHHHHHHHHHHHHcccccEEEEEccHHHHHHHHccccccHHHHHHHHHHHHHHHcccEEEEEEEcccccccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHccccHHHHHHccccccccccccccccEEEEEccHHHHHHHHHHccccHHHHHcccHHHHHHHHHHHHHHccHccc
Coil and Loop (DISEMBL)
mslissclFIFVSFHSVFSQTIDELELRCPQHWVQYRDSCYRFvksplktrndaklncksldsdlanvndadehgFIMYQlfwqdpqrrkwyfggtqqspnlwvneddpqrrkwyfggtqqspnlwvnedgtnlneldaaflpepadnvqrdYLAYSFSQSLKrwgfervtgmeplLFICEASIQKLHYLlnddrtyqygmdienpdkiprgpyfikqptdVVFDLskrnsntgfafiinnenfqyrlpheasiFTAEAIAIFYCIKKISDMKIKKAIIFSdnksvlngidNIQQRNNIIQLIKQEYYFastngsqisfmwipshsnialndKADQLAKNSINSKLLDFYIQDDLKNHLRKNIVKLYNDQwtniqnnklrtikdNTTLWKTSLRKIRNEEILLTRLRIghtrithsylftktphpictcgfpltvkhIFECNKYKKFREKLSLPSIEIALSDNENMAEKTIKYMKMINLYSKV
Flexible Loop (DISEMBL)
MSLISSCLFIFVSFHSVFSQTIDELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRNSNTGFAFIINNENFQYRLPHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGIDNIQQRNNIIQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAKNSINSKLLDFYIQDDLKNHLRKNIVKLyndqwtniqnnklrtikdnttlWKTSLRKIRNEEILLTRLRIGHTRITHSYLFTKTPHPICTCGFPLTVKHIFECNKYKKfreklslpsieialsdnenmAEKTIKYMKMINLYSKV
Low Complexity Region (SEG)
MSLISSCLFIFVSFHSVFSQTIDELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRNSNTGFAFIINNENFQYRLPHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLngidniqqrnniiqlikqEYYFASTNGSQISFMWIPSHSNIALNDKADQLAKNSINSKLLDFYIQDDLKNHLRKNIVKLYNDQWTNIQNNKLRTIKDNTTLWKTSLRKIRNEEILLTRLRIGHTRITHSYLFTKTPHPICTCGFPLTVKHIFECNKYKKFREKLSLPSIEIALSDNENMAEKTIKYMKMINLYSKV
Disordered region (IsUnstruct)
***ISSCLFIFVSFHSVFSQTIDELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRNSNTGFAFIINNENFQYRLPHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGIDNIQQRNNIIQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAKNSINSKLLDFYIQDDLKNHLRKNIVKLYNDQWTNIQNNKLRTIKDNTTLWKTSLRKIRNEEILLTRLRIGHTRITHSYLFTKTPHPICTCGFPLTVKHIFECNKYKKFREKLSLPSIEIALSD***MAEKTIKYMKMINL****
Disordered Region (DISOPRED)
*SLISSCLFIFVSFHSVFSQTIDELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRNSNTGFAFIINNENFQYRLPHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGIDNIQQRNNIIQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQ************FYIQDDLKNHLRKNIVKLYNDQWTNIQNNKLRTIKDNTTLWKTSLRKIRNEEILLTRLRIGHTRITHSYLFTKTPHPICTCGFPLTVKHIFECNKYKKFREKLSLPSIEIALSDNENMAEKTIKYMKMINLYSKV
Disordered Region (DISEMBL)
MSLISSCLFIFVSFHSVFSQTIDELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRNSNTGFAFIINNENFQYRLPHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGIDNIQQRNNIIQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAKNSINSKLLDFYIQDDLKNHLRKNIVKLYNDQWTNIQNNKLRTIKDNTTLWKTSLRKIRNEEILLTRLRIGHTRITHSYLFTKTPHPICTCGFPLTVKHIFECNKYKKFREKLSLPSIEIALSDNENMAEKTIKYMKMINLYSKV
Disordered Region (DISPRO)
*SLISSCLFIFVSFHSVFSQTIDELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRNSNTGFAFIINNENFQYRLPHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGIDNIQQRNNIIQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAKNSINSKLLDFYIQDDLKNHLRKNIVKLYNDQWTNIQNNKLRTIKDNTTLWKTSLRKIRNEEILLTRLRIGHTRITHSYLFTKTPHPICTCGFPLTVKHIFECNKYKKFREKLSLPSIEIALSDNENMAEKTIKYMKMINLYSKV
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSLISSCLFIFVSFHSVFSQTIDELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRNSNTGFAFIINNENFQYRLPHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGIDNIQQRNNIIQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAKNSINSKLLDFYIQDDLKNHLRKNIVKLYNDQWTNIQNNKLRTIKDNTTLWKTSLRKIRNEEILLTRLRIGHTRITHSYLFTKTPHPICTCGFPLTVKHIFECNKYKKFREKLSLPSIEIALSDNENMAEKTIKYMKMINLYSKV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	483	2.2.26 [Sep-21-2011]
Q9VN14	1390	Contactin OS=Drosophila m	yes	N/A	0.409	0.142	0.344	1e-29
Q9UMR7	237	C-type lectin domain fami	yes	N/A	0.267	0.544	0.277	4e-06
Q8HZR8	247	C-type lectin domain fami	yes	N/A	0.178	0.348	0.329	0.0003
Q7Z442	2459	Polycystic kidney disease	no	N/A	0.186	0.036	0.266	0.0003
Q9BXN2	247	C-type lectin domain fami	no	N/A	0.178	0.348	0.329	0.0005

>sp|Q9VN14|CONT_DROME Contactin OS=Drosophila melanogaster GN=Cont PE=1 SV=2

 Score =  131 bits (329), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/241 (34%), Positives = 126/241 (52%), Gaps = 43/241 (17%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
           CP+HWV +R +CYRF++SP +   +AK  CK+ ++DL NV++ ++H FI+  L  Q+ ++
Sbjct: 139 CPEHWVSFRQTCYRFIRSPKRNWAEAKKICKAHNADLINVDNVEKHSFILKNLILQNQRQ 198

Query: 89  RKWYFGGTQQSPNLWVNEDDPQ--RRKWYFGGTQQSPNLWVNED---------------- 130
            +++    Q  P  WVN+D+ Q  + +  F   +Q P    NED                
Sbjct: 199 NRFFISARQTGPLNWVNDDNTQLVQIEDSFSMDEQVP--LENEDLHDNRFLVQNDLNNQN 256

Query: 131 ------------GT----NLNELDAAFLP-EP-ADN-VQRDYLAYSFSQSLKRWGFERVT 171
                       GT    N N L     P +P  DN   RD + Y+FS+   RW F    
Sbjct: 257 INNPNQFYNSLPGTVNQRNQNNLRGFIGPNQPYGDNRYVRDRVVYAFSKKRDRWMFMPAY 316

Query: 172 GMEPLLFICEASI----QKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLS 227
            +E  LFICE+ +      ++  L+D R Y YG+DI + ++IPRGPYF+KQP D  FD++
Sbjct: 317 EIELNLFICESKVLYSSDNVNIKLDDKRPYHYGLDINDMERIPRGPYFVKQPNDTTFDVN 376

Query: 228 K 228
           K
Sbjct: 377 K 377

Required for organization of septate junctions and paracellular barrier functions. Septate junctions, which are the equivalent of vertebrates tight junctions, are characterized by regular arrays of transverse structures that span the intermembrane space and form a physical barrier to diffusion.
Drosophila melanogaster (taxid: 7227)

>sp|Q9UMR7|CLC4A_HUMAN C-type lectin domain family 4 member A OS=Homo sapiens GN=CLEC4A PE=1 SV=1

 Score = 53.5 bits (127), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 33/162 (20%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
           CP++W  +  +CY F+ +   +  D++ +C  +++ L  +N  +E  FI      Q+ Q 
Sbjct: 106 CPKNWKSFSSNCY-FISTESASWQDSEKDCARMEAHLLVINTQEEQDFIF-----QNLQE 159

Query: 89  RKWYFGGTQQSPNLWVNEDDPQ-RRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPA 146
              YF G            DP+ +R W           WV  D T  NE    + P EP+
Sbjct: 160 ESAYFVGL----------SDPEGQRHWQ----------WV--DQTPYNESSTFWHPREPS 197

Query: 147 DNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASIQKLH 188
           D  +R  +  +F +S KRWG+  V  + P   +CE  + K+H
Sbjct: 198 DPNER-CVVLNFRKSPKRWGWNDVNCLGPQRSVCE--MMKIH 236

May be involved in regulating immune reactivity. May play a role in modulating dendritic cells (DC) differentiation and/or maturation. May be involved via its ITIM motif (immunoreceptor tyrosine-based inhibitory motifs) in the inhibition of B-cell-receptor-mediated calcium mobilization and protein tyrosine phosphorylation.

Homo sapiens (taxid: 9606)

>sp|Q8HZR8|CLC7A_MACMU C-type lectin domain family 7 member A OS=Macaca mulatta GN=CLEC7A PE=2 SV=1

 Score = 47.4 bits (111), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 2/88 (2%)

Query: 20  QTIDELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMY 79
           +T   L   CP +W+ Y  SCY F  S L + + +K  C  L S+L  ++ + E GFI+ 
Sbjct: 111 KTTGVLSSPCPPNWIIYEKSCYLFSPS-LNSWDQSKRQCSQLGSNLIKIDSSKELGFIVK 169

Query: 80  QLFWQDPQRRKWYFGGTQQSPNLWVNED 107
           Q+  Q P    W      Q+   W+ ED
Sbjct: 170 QVSSQ-PDNSFWIGLSRPQTEVPWLWED 196

Lectin that functions as pattern receptor specific for beta-1,3-linked and beta-1,6-linked glucans, such as cell wall constituents from pathogenic bacteria and fungi. Necessary for the TLR2-mediated inflammatory response and for TLR2-mediated activation of NF-kappa-B. Enhances cytokine production in macrophages and dendritic cells. Mediates production of reactive oxygen species in the cell. Mediates phagocytosis of C.albicans conidia. Binds T-cells in a way that does not involve their surface glycans and plays a role in T-cell activation. Stimulates T-cell proliferation.

Macaca mulatta (taxid: 9544)

>sp|Q7Z442|PK1L2_HUMAN Polycystic kidney disease protein 1-like 2 OS=Homo sapiens GN=PKD1L2 PE=1 SV=4

 Score = 47.0 bits (110), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 15/105 (14%)

Query: 29  CPQHWVQYRDSCYRFVKSPL-KTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQ 87
           C    V +RD+CY FV  PL +T  DA+  C+     L  + D     F+   +     Q
Sbjct: 28  CSNSQVAFRDACYEFV--PLGRTFRDAQSWCEGQGGHLVFIQDEGTQWFLQKHI----SQ 81

Query: 88  RRKWYFG--------GTQQSPNLWVNEDDPQRRKWYFGGTQQSPN 124
            R+W+ G        GT + P  W++  +     W+ G    +P+
Sbjct: 82  DREWWIGLTWNLARNGTTEGPGTWLDTSNVTYSNWHGGQAAAAPD 126

May function as an ion-channel regulator. May function as a G-protein-coupled receptor.

Homo sapiens (taxid: 9606)

>sp|Q9BXN2|CLC7A_HUMAN C-type lectin domain family 7 member A OS=Homo sapiens GN=CLEC7A PE=1 SV=1

 Score = 46.2 bits (108), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 2/88 (2%)

Query: 20  QTIDELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMY 79
           +T   L   CP +W+ Y  SCY F  S L + + +K  C  L S+L  ++ ++E GFI+ 
Sbjct: 111 KTTGVLSSPCPPNWIIYEKSCYLFSMS-LNSWDGSKRQCWQLGSNLLKIDSSNELGFIVK 169

Query: 80  QLFWQDPQRRKWYFGGTQQSPNLWVNED 107
           Q+  Q P    W      Q+   W+ ED
Sbjct: 170 QVSSQ-PDNSFWIGLSRPQTEVPWLWED 196

Lectin that functions as pattern receptor specific for beta-1,3-linked and beta-1,6-linked glucans, such as cell wall constituents from pathogenic bacteria and fungi. Necessary for the TLR2-mediated inflammatory response and for TLR2-mediated activation of NF-kappa-B. Enhances cytokine production in macrophages and dendritic cells. Mediates production of reactive oxygen species in the cell. Mediates phagocytosis of C.albicans conidia. Binds T-cells in a way that does not involve their surface glycans and plays a role in T-cell activation. Stimulates T-cell proliferation.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	483
328787872	1641	PREDICTED: contactin-like [Apis mellifer	0.409	0.120	0.515	2e-62
380021534	1641	PREDICTED: contactin-like [Apis florea]	0.409	0.120	0.515	3e-62
307183641	1156	Contactin [Camponotus floridanus]	0.426	0.178	0.504	6e-61
322790658	252	hypothetical protein SINV_13283 [Solenop	0.391	0.75	0.529	6e-60
332023779	1220	Contactin [Acromyrmex echinatior]	0.418	0.165	0.508	3e-59
383850888	1650	PREDICTED: contactin-like [Megachile rot	0.416	0.121	0.493	3e-58
340724306	1642	PREDICTED: contactin-like [Bombus terres	0.424	0.124	0.487	3e-57
350420740	1813	PREDICTED: contactin-like [Bombus impati	0.424	0.113	0.482	6e-57
242009529	1266	Contactin precursor, putative [Pediculus	0.376	0.143	0.509	2e-56
307210402	1647	Contactin [Harpegnathos saltator]	0.422	0.123	0.473	2e-54

>gi|328787872|ref|XP_003251020.1| PREDICTED: contactin-like [Apis mellifera]

 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 116/225 (51%), Positives = 156/225 (69%), Gaps = 27/225 (12%)

Query: 8   LFIFVSFHSVFSQTI--DELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDL 65
           ++I++  ++ F+Q I  +EL   CPQHW+++++SCYRF+KSP+K R DAK NC++  SDL
Sbjct: 9   IYIYILSYNTFAQNILYEELYQHCPQHWIKFQESCYRFIKSPIKERQDAKRNCEAYQSDL 68

Query: 66  ANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNL 125
             +N  +EHGFI+YQL WQDPQ RK                       WY G   Q+ N 
Sbjct: 69  ITINSLEEHGFILYQLLWQDPQHRK-----------------------WYTGVKYQNGN- 104

Query: 126 WVNE-DGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASI 184
           W+NE D T L  +D AFLPEP D+  +DYL YS++ +L+RWG E+VTG E LL+ICEA I
Sbjct: 105 WINEGDNTQLINMDNAFLPEPPDSFDKDYLIYSYNNNLQRWGLEKVTGKEKLLYICEAPI 164

Query: 185 QKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKR 229
             L+ L++DDRTYQYG++I+NP++IPRGPYFIKQPTD VFD+S R
Sbjct: 165 SNLYNLIDDDRTYQYGIEIDNPNEIPRGPYFIKQPTDKVFDMSTR 209

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380021534|ref|XP_003694618.1| PREDICTED: contactin-like [Apis florea]

 Score =  245 bits (626), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 116/225 (51%), Positives = 155/225 (68%), Gaps = 27/225 (12%)

Query: 8   LFIFVSFHSVFSQTI--DELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDL 65
           ++I +  ++ F+Q I  +EL   CPQHW+++++SCYRF+KSP+K R DAK NC++  SDL
Sbjct: 9   IYIHILSYNTFAQNILYEELYQHCPQHWIKFQESCYRFIKSPIKERQDAKRNCEAYQSDL 68

Query: 66  ANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNL 125
             +N  +EHGFI+YQL WQDPQ RK                       WY G   Q+ N 
Sbjct: 69  VTINSLEEHGFILYQLLWQDPQHRK-----------------------WYTGVKYQNGN- 104

Query: 126 WVNE-DGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASI 184
           W+NE D T L  +D AFLPEP D   +DYL YS++ +L+RWG E+VTG E LL+ICEA+I
Sbjct: 105 WINEGDNTQLVNMDNAFLPEPLDTFDKDYLIYSYNNNLQRWGLEKVTGKEKLLYICEATI 164

Query: 185 QKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKR 229
             L+ L++DDRTYQYG++I+NP++IPRGPYFIKQPTD VFD+S R
Sbjct: 165 SNLYNLIDDDRTYQYGIEIDNPNEIPRGPYFIKQPTDKVFDMSTR 209

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307183641|gb|EFN70344.1| Contactin [Camponotus floridanus]

 Score =  241 bits (615), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 117/232 (50%), Positives = 158/232 (68%), Gaps = 26/232 (11%)

Query: 3   LISSCLFIFVSFHSVFSQTIDELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLD 62
           L+S+ +F+ +    VF+Q I      CPQHW+++++SCYRF+KSPL++R DA+ NC++  
Sbjct: 4   LLSNVVFLLILLLPVFAQNILHEPYECPQHWIRFQESCYRFIKSPLRSRMDARRNCQAFQ 63

Query: 63  SDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQS 122
           SDL ++N  +EH FI+Y+L WQDPQ R+                       WY G   QS
Sbjct: 64  SDLLSINTLEEHRFILYELLWQDPQHRR-----------------------WYTGIKLQS 100

Query: 123 PNLWVNE-DGTNLNELDAAFLPEPADNV-QRDYLAYSFSQSLKRWGFERVTGMEPLLFIC 180
            + W+NE DGT L  +D AFLPEP DN+  RDYLAYS+S +L+RWG E+VTG E LL+IC
Sbjct: 101 GS-WINEADGTALINMDNAFLPEPNDNIIGRDYLAYSYSNNLQRWGLEKVTGREELLYIC 159

Query: 181 EASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRNSN 232
           +ASI  LH L+ DDRTYQYG++I+NP +IPRGPYFIKQP   VFD++K+  N
Sbjct: 160 KASIVILHNLVEDDRTYQYGIEIDNPLQIPRGPYFIKQPMSKVFDIAKKRVN 211

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322790658|gb|EFZ15442.1| hypothetical protein SINV_13283 [Solenopsis invicta]

 Score =  238 bits (606), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 115/217 (52%), Positives = 144/217 (66%), Gaps = 28/217 (12%)

Query: 17  VFSQTI--DELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEH 74
            F+Q I   E    CPQHW+++++SCYRF+KSPL+ R DA+ NC++  SDL  +N  +EH
Sbjct: 1   AFAQNILYGEQAYECPQHWIRFQESCYRFIKSPLRPREDARRNCQAFQSDLLTINSMEEH 60

Query: 75  GFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNE-DGTN 133
           GF++YQL WQDPQ R W                        + G +    LW+NE D T 
Sbjct: 61  GFVLYQLLWQDPQHRTW------------------------YTGVKLQSGLWINEADSTT 96

Query: 134 LNELDAAFLPEPADNV-QRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASIQKLHYLLN 192
           L  +D AFLPEP DNV  RDYLAYS+S +L+RWG E+VTG E LL+ICEA I  LH L+ 
Sbjct: 97  LINMDNAFLPEPNDNVLGRDYLAYSYSNNLQRWGLEKVTGREELLYICEAPIATLHNLVE 156

Query: 193 DDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKR 229
           DDRTYQYG+DI+NP +IPRGPYFIKQP   VFD+SKR
Sbjct: 157 DDRTYQYGIDIDNPLQIPRGPYFIKQPISKVFDVSKR 193

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332023779|gb|EGI64003.1| Contactin [Acromyrmex echinatior]

 Score =  235 bits (600), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 117/230 (50%), Positives = 152/230 (66%), Gaps = 28/230 (12%)

Query: 3   LISSCLFIFVSFHSVFSQTIDELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLD 62
           LI++   + +S  +     +   E +CPQHW+Q+++SCYRFVKSPL+ R DA+ NC++  
Sbjct: 5   LITAVFSLILSLPAFAQNILYGEEYKCPQHWIQFQESCYRFVKSPLRPREDARRNCQAFQ 64

Query: 63  SDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQS 122
           SDL  +N  +EHGF++YQL WQDPQ R+                       WY G   Q+
Sbjct: 65  SDLLTINTMEEHGFVLYQLLWQDPQHRR-----------------------WYTGIKLQN 101

Query: 123 PNLWVNE-DGTNLNELDAAFLPEPADNV-QRDYLAYSFSQSLKRWGFERVTGMEPLLFIC 180
             LW+NE D T L  +D AFLPE  DN+  RDYLAYS+S SL+RWG E+VTG E LL+IC
Sbjct: 102 -GLWINEADSTTLINMDNAFLPE--DNILGRDYLAYSYSNSLQRWGLEKVTGREELLYIC 158

Query: 181 EASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRN 230
           EA I  LH L+ +DRTYQYG++I+NP +IPRGPYFIKQP + VFD SKRN
Sbjct: 159 EAPIATLHNLVEEDRTYQYGINIDNPLQIPRGPYFIKQPINKVFDQSKRN 208

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383850888|ref|XP_003701006.1| PREDICTED: contactin-like [Megachile rotundata]

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 113/229 (49%), Positives = 148/229 (64%), Gaps = 28/229 (12%)

Query: 8   LFIFVSFHSVFSQTI--DELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDL 65
           ++  V+   V++Q     E   +CP HW+++++SCYRF+KSP++ R DA+ NC++  SDL
Sbjct: 9   IYTLVALTGVYTQNFLYGEEYNQCPLHWIKFQESCYRFIKSPVRERQDARKNCQAYQSDL 68

Query: 66  ANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNL 125
             +N  +EHGFIMYQL WQDPQ  K                       WY G   Q+ N 
Sbjct: 69  LTINSLEEHGFIMYQLLWQDPQHHK-----------------------WYTGIKNQNGN- 104

Query: 126 WVNE-DGTNLNELDAAFLPEPAD-NVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 183
           WVNE D T L  +D AFLPEP D +  RDY+ YS++ +L+RWG E VTG E LL+ICEA 
Sbjct: 105 WVNEADNTQLTNMDNAFLPEPNDRDYNRDYVVYSYNNNLRRWGLETVTGSEKLLYICEAP 164

Query: 184 IQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRNSN 232
           +  LH L+ DDRTY YG++IENP++IPRGPYFIKQP D VFD+SKR  N
Sbjct: 165 MSNLHNLIEDDRTYHYGVEIENPNEIPRGPYFIKQPVDKVFDVSKRKIN 213

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340724306|ref|XP_003400523.1| PREDICTED: contactin-like [Bombus terrestris]

 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 113/232 (48%), Positives = 150/232 (64%), Gaps = 27/232 (11%)

Query: 9   FIFVSFHSVFSQTIDELEL-RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLAN 67
           +I +     F+Q +   E  +CPQHW+++++SCYRF+KSP++ R +AK NC++  SDL  
Sbjct: 10  YILIVTSYTFAQNVLYGEQNQCPQHWIKFQESCYRFIKSPIRDRQEAKKNCEAYRSDLIT 69

Query: 68  VNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWV 127
           +N  +EHGFI+Y L WQDPQ RK                       WY G   Q+ N W+
Sbjct: 70  INSLEEHGFILYHLLWQDPQHRK-----------------------WYTGIKYQNGN-WI 105

Query: 128 NE-DGTNLNELDAAFLPEPADN-VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASIQ 185
           NE D T L  ++ AFLPEP DN +  DYL YS+  +L+RWG E+VTG +  L+ICEA I 
Sbjct: 106 NEADNTQLLNMENAFLPEPVDNTLGEDYLVYSYHNNLQRWGLEKVTGRDRFLYICEAPIS 165

Query: 186 KLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRNSNTGFAF 237
            L+ L++DDRTYQYG++I+NP +IPRGPYFIKQPTD VFDLSKR  N   A 
Sbjct: 166 NLYNLVDDDRTYQYGIEIDNPREIPRGPYFIKQPTDKVFDLSKRKINNDVAL 217

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350420740|ref|XP_003492608.1| PREDICTED: contactin-like [Bombus impatiens]

 Score =  228 bits (580), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 112/232 (48%), Positives = 148/232 (63%), Gaps = 27/232 (11%)

Query: 9   FIFVSFHSVFSQTIDELE-LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLAN 67
           +I +     F+Q +   E  +CPQHW+++++SCYRF+KSP++ R +AK NC++  SDL  
Sbjct: 10  YILIVTSYTFAQNVLYGEQYQCPQHWIKFQESCYRFIKSPIRDRQEAKKNCEAYQSDLTT 69

Query: 68  VNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWV 127
           +N  +EHGFI+Y L WQDPQ  K                       WY G   Q+ N W+
Sbjct: 70  INSLEEHGFILYHLLWQDPQHHK-----------------------WYTGIKYQNGN-WI 105

Query: 128 NE-DGTNLNELDAAFLPEPADN-VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASIQ 185
           NE D T L  ++ AFLPEP DN +  DYL YS+  +L+RWG E+V G +  L+ICEA I 
Sbjct: 106 NEADNTQLLNMENAFLPEPVDNTLGGDYLVYSYHNNLQRWGLEKVNGRDRFLYICEAPIS 165

Query: 186 KLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRNSNTGFAF 237
            LH L++DDRTYQYG++I+NP +IPRGPYFIKQPTD VFDLSKR  N   A 
Sbjct: 166 NLHNLVDDDRTYQYGIEIDNPREIPRGPYFIKQPTDKVFDLSKRKINNDVAL 217

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242009529|ref|XP_002425536.1| Contactin precursor, putative [Pediculus humanus corporis] gi|212509411|gb|EEB12798.1| Contactin precursor, putative [Pediculus humanus corporis]

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 104/204 (50%), Positives = 136/204 (66%), Gaps = 22/204 (10%)

Query: 24  ELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFW 83
           E EL+CPQHW QY+ SCYRF+KSP++ R DAK NC++  SDL +VN  +EHGF++YQL W
Sbjct: 69  EYELKCPQHWEQYQQSCYRFIKSPMRAREDAKKNCEAYHSDLVSVNSLEEHGFLIYQLLW 128

Query: 84  QDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP 143
           +DPQ RKWY    Q +P  WVN+                       DG+ L  ++ AFLP
Sbjct: 129 RDPQHRKWYTSIRQHNPGNWVNDG----------------------DGSPLLNMENAFLP 166

Query: 144 EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASIQKLHYLLNDDRTYQYGMDI 203
              +N   DYL YS+S +LKRWGF+ V G E  L+ICEA I KLHY+  D+RT++YG+++
Sbjct: 167 SQDNNYGSDYLVYSYSHNLKRWGFKAVKGDEQFLYICEAHIGKLHYMSVDERTHEYGINV 226

Query: 204 ENPDKIPRGPYFIKQPTDVVFDLS 227
            +P+KIP GPYFI QP DVVFD+S
Sbjct: 227 NDPNKIPMGPYFIMQPQDVVFDVS 250

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307210402|gb|EFN86967.1| Contactin [Harpegnathos saltator]

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 109/230 (47%), Positives = 147/230 (63%), Gaps = 26/230 (11%)

Query: 3   LISSCLFIFVSFHSVFSQTI--DELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS 60
           L+   +F  V    V++Q+   +E   +CP HW++++ SCYRF+ SPL++R +A+ NC++
Sbjct: 4   LLCVVVFSLVLSLPVYAQSTFYEESTYQCPLHWIKFQQSCYRFINSPLRSRENARKNCQA 63

Query: 61  LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQ 120
             SDL  +N  DEHGF++                        + + D     +WY G  Q
Sbjct: 64  FQSDLLTINSVDEHGFVIQH----------------------FRDNDQYHHHRWYIGVKQ 101

Query: 121 QSPNLWVNE-DGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFI 179
           Q+  +W+NE D TNL  LD+ FLPEP DN+ RDYLAYSFS SL RWG ERVTG++ LL+I
Sbjct: 102 QN-GIWINEADNTNLINLDSIFLPEPNDNIIRDYLAYSFSISLNRWGLERVTGLDELLYI 160

Query: 180 CEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKR 229
           CEASI  L  L+ DDRTYQYG++I NP +IPRGPYFIKQP   VFD+SK+
Sbjct: 161 CEASIAALRNLVEDDRTYQYGIEIYNPLEIPRGPYFIKQPKSKVFDVSKK 210

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	483
FB|FBgn0037240	1390	Cont "Contactin" [Drosophila m	0.169	0.058	0.390	4.9e-28
ZFIN|ZDB-GENE-070912-39	151	si:ch211-125e6.5 "si:ch211-125	0.223	0.715	0.275	4.5e-06
ZFIN|ZDB-GENE-070912-38	149	si:ch211-125e6.14 "si:ch211-12	0.223	0.724	0.285	1.5e-05
UNIPROTKB|D4A3W3	219	Cd302 "CD302 antigen" [Rattus	0.200	0.442	0.275	4.1e-05
RGD|1307606	228	Cd302 "CD302 molecule" [Rattus	0.200	0.425	0.275	4.8e-05
UNIPROTKB|Q5FVR3	228	Cd302 "CD302 antigen" [Rattus	0.200	0.425	0.275	4.8e-05
UNIPROTKB|H0YGB2	138	CLEC4C "C-type lectin domain f	0.192	0.673	0.270	8.8e-05
UNIPROTKB|H0YH49	140	CLEC2D "C-type lectin domain f	0.194	0.671	0.281	8.8e-05
UNIPROTKB|F1PPJ0	226	CLEC4E "Uncharacterized protei	0.246	0.526	0.255	0.00014
ZFIN|ZDB-GENE-080220-41	96	zgc:171818 "zgc:171818" [Danio	0.151	0.760	0.341	0.00014

FB|FBgn0037240 Cont "Contactin" [Drosophila melanogaster (taxid:7227)]

 Score = 203 (76.5 bits), Expect = 4.9e-28, Sum P(2) = 4.9e-28
 Identities = 32/82 (39%), Positives = 55/82 (67%)

Query:    29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
             CP+HWV +R +CYRF++SP +   +AK  CK+ ++DL NV++ ++H FI+  L  Q+ ++
Sbjct:   139 CPEHWVSFRQTCYRFIRSPKRNWAEAKKICKAHNADLINVDNVEKHSFILKNLILQNQRQ 198

Query:    89 RKWYFGGTQQSPNLWVNEDDPQ 110
              +++    Q  P  WVN+D+ Q
Sbjct:   199 NRFFISARQTGPLNWVNDDNTQ 220

GO:0007155 "cell adhesion" evidence=ISS

GO:0005918 "septate junction" evidence=IDA;NAS

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0019991 "septate junction assembly" evidence=IMP

GO:0005919 "pleated septate junction" evidence=IDA

GO:0045197 "establishment or maintenance of epithelial cell apical/basal polarity" evidence=IC

GO:0021682 "nerve maturation" evidence=IMP

GO:0008366 "axon ensheathment" evidence=IMP

GO:0060857 "establishment of glial blood-brain barrier" evidence=IMP

GO:0005886 "plasma membrane" evidence=IDA

ZFIN|ZDB-GENE-070912-39 si:ch211-125e6.5 "si:ch211-125e6.5" [Danio rerio (taxid:7955)]

 Score = 115 (45.5 bits), Expect = 4.5e-06, P = 4.5e-06
 Identities = 32/116 (27%), Positives = 55/116 (47%)

Query:     1 MSLISSCLFIFVSFHSVFSQTIDELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS 60
             M+++ + L + V F S+ +  I   +  CP  W ++   CYRF+   + T   A+ NC+S
Sbjct:     1 MAMLRNLLLLSVMF-SLGNAGIGTCQ--CPYGWSKFGVKCYRFISQSV-TWATAEKNCQS 56

Query:    61 LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFG--GTQQSPNLWVNEDDPQRRKW 114
             L ++LA+V+   EH F++  +       R W  G  G  +   LW +        W
Sbjct:    57 LGANLASVHSKAEHDFLLSLI--PSSSTRCWIGGHDGENEGQWLWTDGSAIDYNNW 110

GO:0030246 "carbohydrate binding" evidence=IEA

ZFIN|ZDB-GENE-070912-38 si:ch211-125e6.14 "si:ch211-125e6.14" [Danio rerio (taxid:7955)]

 Score = 110 (43.8 bits), Expect = 1.5e-05, P = 1.5e-05
 Identities = 34/119 (28%), Positives = 53/119 (44%)

Query:     1 MSLISSCLFIFVSFHSVFSQTIDELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS 60
             M  + S L +F+ F S   Q  DE   +CP  W      C++F    +     A+ NC+ 
Sbjct:     1 MVFLRSLLLLFIIFSSAAGQ--DE---KCPCGWKNSGSRCFKFFSESVDWIT-AERNCQG 54

Query:    61 LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFG--GTQQSPNLWVNEDDPQRRKWYFG 117
             L ++LA++ D  E+ F++  +   D   R W  G  G Q+   LW +        WY G
Sbjct:    55 LGTNLASIQDKVENDFLLSLV--PD-STRCWVGGHDGEQEGQWLWTDGSVYNYTNWYPG 110

GO:0030246 "carbohydrate binding" evidence=IEA

UNIPROTKB|D4A3W3 Cd302 "CD302 antigen" [Rattus norvegicus (taxid:10116)]

 Score = 122 (48.0 bits), Expect = 4.1e-05, P = 4.1e-05
 Identities = 30/109 (27%), Positives = 55/109 (50%)

Query:    29 CPQH-WVQYRDSCYRFVKSPLKTRN--DAKLNCKSLDSDLANVNDADEHGFIMYQLFWQD 85
             CP   WVQ++ SCY F++  +   N  D +  C    +DL ++++ +E+ FI+      D
Sbjct:    22 CPSSIWVQFQGSCYTFLQVTINVENIEDVRKQCTDHGADLVSIHNEEENAFIL------D 75

Query:    86 PQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNL 134
               +++W  G       ++ + DD    KW F  +  + + W +EDG +L
Sbjct:    76 TLQKRWK-GPDDLLLGMFYDTDDASF-KW-FDQSNMTFDKWADEDGEDL 121

GO:0030246 "carbohydrate binding" evidence=IEA

RGD|1307606 Cd302 "CD302 molecule" [Rattus norvegicus (taxid:10116)]

 Score = 122 (48.0 bits), Expect = 4.8e-05, P = 4.8e-05
 Identities = 30/109 (27%), Positives = 55/109 (50%)

Query:    29 CPQH-WVQYRDSCYRFVKSPLKTRN--DAKLNCKSLDSDLANVNDADEHGFIMYQLFWQD 85
             CP   WVQ++ SCY F++  +   N  D +  C    +DL ++++ +E+ FI+      D
Sbjct:    22 CPSSIWVQFQGSCYTFLQVTINVENIEDVRKQCTDHGADLVSIHNEEENAFIL------D 75

Query:    86 PQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNL 134
               +++W  G       ++ + DD    KW F  +  + + W +EDG +L
Sbjct:    76 TLQKRWK-GPDDLLLGMFYDTDDASF-KW-FDQSNMTFDKWADEDGEDL 121

GO:0005902 "microvillus" evidence=IEA

GO:0005938 "cell cortex" evidence=IEA;ISO

GO:0006909 "phagocytosis" evidence=IEA;ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0030175 "filopodium" evidence=IEA;ISO

GO:0030246 "carbohydrate binding" evidence=IEA

UNIPROTKB|Q5FVR3 Cd302 "CD302 antigen" [Rattus norvegicus (taxid:10116)]

 Score = 122 (48.0 bits), Expect = 4.8e-05, P = 4.8e-05
 Identities = 30/109 (27%), Positives = 55/109 (50%)

Query:    29 CPQH-WVQYRDSCYRFVKSPLKTRN--DAKLNCKSLDSDLANVNDADEHGFIMYQLFWQD 85
             CP   WVQ++ SCY F++  +   N  D +  C    +DL ++++ +E+ FI+      D
Sbjct:    22 CPSSIWVQFQGSCYTFLQVTINVENIEDVRKQCTDHGADLVSIHNEEENAFIL------D 75

Query:    86 PQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNL 134
               +++W  G       ++ + DD    KW F  +  + + W +EDG +L
Sbjct:    76 TLQKRWK-GPDDLLLGMFYDTDDASF-KW-FDQSNMTFDKWADEDGEDL 121

GO:0030246 "carbohydrate binding" evidence=IEA

UNIPROTKB|H0YGB2 CLEC4C "C-type lectin domain family 4 member C" [Homo sapiens (taxid:9606)]

 Score = 103 (41.3 bits), Expect = 8.8e-05, P = 8.8e-05
 Identities = 30/111 (27%), Positives = 51/111 (45%)

Query:    29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
             CP  W  ++ SCY F+ + +++   ++ NC  + +DL  +N  +E  FI+  L     +R
Sbjct:    43 CPTPWTSFQSSCY-FISTGMQSWTKSQKNCSVMGADLVVINTREEQDFIIQNL-----KR 96

Query:    89 RKWYFGGTQQSPNLWVNEDDPQRRKW-YFGGTQQSPNL--WVNEDGTNLNE 136
                YF G           D   RR W +   T  + N+  W + +  NL+E
Sbjct:    97 NSSYFLGLS---------DPGGRRHWQWVDQTPYNENVTFWHSGEPNNLDE 138

GO:0030246 "carbohydrate binding" evidence=IEA

UNIPROTKB|H0YH49 CLEC2D "C-type lectin domain family 2 member D" [Homo sapiens (taxid:9606)]

 Score = 103 (41.3 bits), Expect = 8.8e-05, P = 8.8e-05
 Identities = 31/110 (28%), Positives = 49/110 (44%)

Query:    25 LELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQ 84
             L+  CP+ W+ ++  C+ F     K    ++  C S D+DLA V    E  F+   L ++
Sbjct:    28 LQAACPESWIGFQRKCFYF-SDDTKNWTSSQRFCDSQDADLAQVESFQELNFL---LRYK 83

Query:    85 DPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNL 134
              P    W  G +++    W         KW   GT+ +  L + EDG NL
Sbjct:    84 GPSDH-W-IGLSREQGQPW---------KW-INGTEWTRQLVMKEDGANL 121

GO:0030246 "carbohydrate binding" evidence=IEA

UNIPROTKB|F1PPJ0 CLEC4E "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 118 (46.6 bits), Expect = 0.00014, P = 0.00014
 Identities = 33/129 (25%), Positives = 58/129 (44%)

Query:    11 FVSFHSVFSQTIDELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVND 70
             F+ F S  +  +  ++  CP  WV ++ SCY F  + +   +  K NC ++ + L  +N 
Sbjct:    63 FMDF-SCSNDGLGSVKNCCPSDWVHFQSSCYLFSTNTMSWTSSLK-NCSNMGAHLVVINT 120

Query:    71 ADEHGFIMYQLFWQDPQRRKWYFGGTQQSPN---LWVNEDDPQRRKWYFGGTQQSPNLWV 127
              +E  F    LF+  P+R+++Y G T Q       WV +  P      F    +  N+  
Sbjct:   121 QEEQEF----LFFAKPKRKEFYIGLTDQVKEGQWQWV-DGTPFTESLSFWDVGEPNNIVT 175

Query:   128 NEDGTNLNE 136
              ED   + +
Sbjct:   176 VEDCATIRD 184

GO:0050715 "positive regulation of cytokine secretion" evidence=IEA

GO:0006955 "immune response" evidence=IEA

GO:0004872 "receptor activity" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

ZFIN|ZDB-GENE-080220-41 zgc:171818 "zgc:171818" [Danio rerio (taxid:7955)]

 Score = 101 (40.6 bits), Expect = 0.00014, P = 0.00014
 Identities = 27/79 (34%), Positives = 43/79 (54%)

Query:     1 MSLISSCLFIFVSFHSVFS-QTIDELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCK 59
             M L+ S L + +    VFS +  DE  LRC + W +    C+RF    +     A+ NC+
Sbjct:     2 MFLLRSLLLLSI----VFSMEGADEERLRCERGWSRSGSRCFRFFSRSVNWVT-AERNCQ 56

Query:    60 SLDSDLANVNDADEHGFIM 78
             SL  +LA+V+D  E+ F++
Sbjct:    57 SLGGNLASVHDQVENDFLL 75

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.26	LOW CONFIDENCE prediction!
3rd Layer	3.1.26.4	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	483
cd09276	128	cd09276, Rnase_HI_RT_non_LTR, non-LTR RNase HI dom	2e-29
pfam00075	126	pfam00075, RNase_H, RNase H	1e-13
cd06222	123	cd06222, RNase_H, RNase H is an endonuclease that	3e-13
smart00034	124	smart00034, CLECT, C-type lectin (CTL) or carbohyd	3e-10
cd03593	116	cd03593, CLECT_NK_receptors_like, C-type lectin-li	9e-09
cd03590	126	cd03590, CLECT_DC-SIGN_like, C-type lectin-like do	1e-07
cd00037	116	cd00037, CLECT, C-type lectin (CTL)/C-type lectin-	2e-06
cd09277	133	cd09277, RNase_HI_bacteria_HBD, Bacterial RNase HI	2e-06
cd09280	150	cd09280, RNase_HI_eukaryote_like, Eukaryotic RNase	3e-06
pfam05473	191	pfam05473, Herpes_UL45, UL45 protein	7e-05
cd03589	137	cd03589, CLECT_CEL-1_like, C-type lectin-like doma	2e-04
COG0328	154	COG0328, RnhA, Ribonuclease HI [DNA replication, r	3e-04
pfam13456	88	pfam13456, RVT_3, Reverse transcriptase-like	4e-04
cd09279	128	cd09279, RNase_HI_archaeal_like, RNAse HI family t	0.001
cd03594	129	cd03594, CLECT_REG-1_like, C-type lectin-like doma	0.001
PHA03097	157	PHA03097, PHA03097, C-type lectin-like protein; Pr	0.002
cd09278	139	cd09278, RNase_HI_prokaryote_like, RNase HI family	0.004

>gnl|CDD|187700 cd09276, Rnase_HI_RT_non_LTR, non-LTR RNase HI domain of reverse transcriptases

 Score =  111 bits (280), Expect = 2e-29
 Identities = 35/124 (28%), Positives = 63/124 (50%), Gaps = 6/124 (4%)

Query: 222 VVF-DLSKRNSNTGFAFII---NNENFQYRLPHEASIFTAEAIAIFYCIKKISDMK--IK 275
           V++ D SK    TG  F I      +  Y+L    S+F AE +AI   ++         +
Sbjct: 1   VIYTDGSKLEGRTGAGFAIVRKGTISRSYKLGPYCSVFDAELLAILEALQLALREGRRAR 60

Query: 276 KAIIFSDNKSVLNGIDNIQQRNNIIQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKAD 335
           K  IFSD+++ L  + + +  + ++  I++     + +G ++   W+P HS I  N++AD
Sbjct: 61  KITIFSDSQAALKALRSPRSSSPLVLRIRKAIRELANHGVKVRLHWVPGHSGIEGNERAD 120

Query: 336 QLAK 339
           +LAK
Sbjct: 121 RLAK 124

Ribonuclease H (RNase H) is classified into two families, type 1 (prokaryotic RNase HI, eukaryotic RNase H1 and viral RNase H) and type 2 (prokaryotic RNase HII and HIII, and eukaryotic RNase H2). Ribonuclease HI (RNase HI) is an endonuclease that cleaves the RNA strand of an RNA/DNA hybrid in a sequence non-specific manner. RNase H is widely present in various organisms, including bacteria, archaea and eukaryotes. RNase HI has also been observed as an adjunct domain to the reverse transcriptase gene in retroviruses, long-term repeat (LTR)-bearing retrotransposons and non-LTR retrotransposons. RNase HI in LTR retrotransposons perform degradation of the original RNA template, generation of a polypurine tract (the primer for plus-strand DNA synthesis), and final removal of RNA primers from newly synthesized minus and plus strands. The catalytic residues for RNase H enzymatic activity, three aspartatic acids and one glutamatic acid residue (DEDD), are unvaried across all RNase H domains. The position of the RNase domain of non-LTR and LTR transposons is at the carboxyl terminal of the reverse transcriptase (RT) domain and their RNase domains group together, indicating a common evolutionary origin. Many non-LTR transposons have lost the RNase domain because their activity is at the nucleus and cellular RNase may suffice; however LTR retotransposons always encode their own RNase domain because it requires RNase activity in RNA-protein particles in the cytoplasm. RNase H inhibitors have been explored as an anti-HIV drug target because RNase H inactivation inhibits reverse transcription. Length = 128

>gnl|CDD|215695 pfam00075, RNase_H, RNase H

 Score = 67.7 bits (166), Expect = 1e-13
 Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 5/114 (4%)

Query: 227 SKRNSNTGFAFIINNE-NFQYRLPHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKS 285
           +      G  ++ +        LP   +   AE +A+   ++ +S    +K  I++D++ 
Sbjct: 13  NGNPGPGGAGYVTDGGKQRSKPLPG-TTNQRAELLALIEALEALSG---QKVNIYTDSQY 68

Query: 286 VLNGIDNIQQRNNIIQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAK 339
           V+ GI N     +  + IK E +       ++   W+P HS I  N+ AD+LAK
Sbjct: 69  VIGGITNGWPTKSESKPIKNEIWELLQKKHKVYIQWVPGHSGIPGNELADKLAK 122

RNase H digests the RNA strand of an RNA/DNA hybrid. Important enzyme in retroviral replication cycle, and often found as a domain associated with reverse transcriptases. Structure is a mixed alpha+beta fold with three a/b/a layers. Length = 126

>gnl|CDD|187690 cd06222, RNase_H, RNase H is an endonuclease that cleaves the RNA strand of an RNA/DNA hybrid in a sequence non-specific manner

 Score = 65.8 bits (161), Expect = 3e-13
 Identities = 24/118 (20%), Positives = 48/118 (40%), Gaps = 9/118 (7%)

Query: 230 NSNTGFAFIINNENFQYRL-----PHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNK 284
               G   ++ +    +          A+   AE +A+   ++   D+ +KK II +D+K
Sbjct: 10  PGPAGAGGVLRDHEGAWLFAGSLSIPAATNNEAELLALLEALELALDLGLKKLIIETDSK 69

Query: 285 SVLNGIDNIQQRNNIIQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAKNSI 342
            V++ I++  +      L+  +     +    I F  +P   N      AD+LAK + 
Sbjct: 70  YVVDLINSWSKGWKKNNLLLWDILLLLSKFIDIRFEHVPREGNEV----ADRLAKEAA 123

Ribonuclease H (RNase H) enzymes are divided into two major families, Type 1 and Type 2, based on amino acid sequence similarities and biochemical properties. RNase H is an endonuclease that cleaves the RNA strand of an RNA/DNA hybrid in a sequence non-specific manner in the presence of divalent cations. RNase H is widely present in various organisms, including bacteria, archaea and eukaryotes. Most prokaryotic and eukaryotic genomes contain multiple RNase H genes. Despite the lack of amino acid sequence homology, Type 1 and type 2 RNase H share a main-chain fold and steric configurations of the four acidic active-site residues and have the same catalytic mechanism and functions in cells. RNase H is involved in DNA replication, repair and transcription. One of the important functions of RNase H is to remove Okazaki fragments during DNA replication. RNase H inhibitors have been explored as an anti-HIV drug target because RNase H inactivation inhibits reverse transcription. Length = 123

>gnl|CDD|214480 smart00034, CLECT, C-type lectin (CTL) or carbohydrate-recognition domain (CRD)

 Score = 57.2 bits (138), Expect = 3e-10
 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)

Query: 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
          CP  W+ Y   CY+F     KT  DA+  C+SL   LA+++   E+ F+   L       
Sbjct: 1  CPSGWISYGGKCYKFSTEK-KTWEDAQAFCQSLGGHLASIHSEAENDFVASLLKNSGSSD 59

Query: 89 RKW 91
            W
Sbjct: 60 YYW 62

Many of these domains function as calcium-dependent carbohydrate binding modules. Length = 124

>gnl|CDD|153063 cd03593, CLECT_NK_receptors_like, C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

 Score = 53.1 bits (128), Expect = 9e-09
 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 5/59 (8%)

Query: 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQL----FW 83
          CP+ W+ Y + CY F     KT N++K  C S +S L  ++D +E  F+  Q+    +W
Sbjct: 1  CPKDWICYGNKCYYFSMEK-KTWNESKEACSSKNSSLLKIDDEEELEFLQSQIGSSSYW 58

CLECT_NK_receptors_like: C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs), including proteins similar to oxidized low density lipoprotein (OxLDL) receptor (LOX-1), CD94, CD69, NKG2-A and -D, osteoclast inhibitory lectin (OCIL), dendritic cell-associated C-type lectin-1 (dectin-1), human myeloid inhibitory C-type lectin-like receptor (MICL), mast cell-associated functional antigen (MAFA), killer cell lectin-like receptors: subfamily F, member 1 (KLRF1) and subfamily B, member 1 (KLRB1), and lys49 receptors. CTLD refers to a domain homologous to the carbohydrate-recognition domains (CRDs) of the C-type lectins. NKRs are variously associated with activation or inhibition of natural killer (NK) cells. Activating NKRs stimulate cytolysis by NK cells of virally infected or transformed cells; inhibitory NKRs block cytolysis upon recognition of markers of healthy self cells. Most Lys49 receptors are inhibitory; some are stimulatory. OCIL inhibits NK cell function via binding to the receptor NKRP1D. Murine OCIL in addition to inhibiting NK cell function inhibits osteoclast differentiation. MAFA clusters with the type I Fc epsilon receptor (FcepsilonRI) and inhibits the mast cells secretory response to FcepsilonRI stimulus. CD72 is a negative regulator of B cell receptor signaling. NKG2D is an activating receptor for stress-induced antigens; human NKG2D ligands include the stress induced MHC-I homologs, MICA, MICB, and ULBP family of glycoproteins Several NKRs have a carbohydrate-binding capacity which is not mediated through calcium ions (e.g. OCIL binds a range of high molecular weight sulfated glycosaminoglycans including dextran sulfate, fucoidan, and gamma-carrageenan sugars). Dectin-1 binds fungal beta-glucans and in involved in the innate immune responses to fungal pathogens. MAFA binds saccharides having terminal alpha-D mannose residues in a calcium-dependent manner. LOX-1 is the major receptor for OxLDL in endothelial cells and thought to play a role in the pathology of atherosclerosis. Some NKRs exist as homodimers (e.g.Lys49, NKG2D, CD69, LOX-1) and some as heterodimers (e.g. CD94/NKG2A). Dectin-1 can function as a monomer in vitro. Length = 116

>gnl|CDD|153060 cd03590, CLECT_DC-SIGN_like, C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)

 Score = 50.4 bits (121), Expect = 1e-07
 Identities = 26/113 (23%), Positives = 46/113 (40%), Gaps = 24/113 (21%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQL-----FW 83
           CP +W  ++ SCY F  +  K+  +++  C+ + + L  +N  +E  FI   L     +W
Sbjct: 1   CPTNWKSFQSSCY-FFSTEKKSWEESRQFCEDMGAHLVIINSQEEQEFISKILSGNRSYW 59

Query: 84  ---QDPQR-RKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLW--VNED 130
               D +   +W           WV+       K ++   +  PN W    ED
Sbjct: 60  IGLSDEETEGEW----------KWVDGTPLNSSKTFWHPGE--PNNWGGGGED 100

CLECT_DC-SIGN_like: C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR). This group also contains proteins similar to hepatic asialoglycoprotein receptor (ASGP-R) and langerin in human. These proteins are type II membrane proteins with a CTLD ectodomain. CTLD refers to a domain homologous to the carbohydrate-recognition domains (CRDs) of the C-type lectins. DC-SIGN is thought to mediate the initial contact between dendritic cells and resting T cells, and may also mediate the rolling of DCs on epithelium. DC-SIGN and DC-SIGNR bind to oligosaccharides present on human tissues, as well as, on pathogens including parasites, bacteria, and viruses. DC-SIGN and DC-SIGNR bind to HIV enhancing viral infection of T cells. DC-SIGN and DC-SIGNR are homotetrameric, and contain four CTLDs stabilized by a coiled coil of alpha helices. The hepatic ASGP-R is an endocytic recycling receptor which binds and internalizes desialylated glycoproteins having a terminal galactose or N-acetylgalactosamine residues on their N-linked carbohydrate chains, via the clathrin-coated pit mediated endocytic pathway, and delivers them to lysosomes for degradation. It has been proposed that glycoproteins bearing terminal Sia (sialic acid) alpha2, 6GalNAc and Sia alpha2, 6Gal are endogenous ligands for ASGP-R and that ASGP-R participates in regulating the relative concentration of serum glycoproteins bearing alpha 2,6-linked Sia. The human ASGP-R is a hetero-oligomer composed of two subunits, both of which are found within this group. Langerin is expressed in a subset of dendritic leukocytes, the Langerhans cells (LC). Langerin induces the formation of Birbeck Granules (BGs) and associates with these BGs following internalization. Langerin binds, in a calcium-dependent manner, to glyco-conjugates containing mannose and related sugars mediating their uptake and degradation. Langerin molecules oligomerize as trimers with three CTLDs held together by a coiled-coil of alpha helices. Length = 126

>gnl|CDD|153057 cd00037, CLECT, C-type lectin (CTL)/C-type lectin-like (CTLD) domain

 Score = 46.5 bits (110), Expect = 2e-06
 Identities = 31/143 (21%), Positives = 48/143 (33%), Gaps = 28/143 (19%)

Query: 39  SCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQ 98
           SCY+F      T  +A+  C+SL   LA+++  +E+ F+   L  +       + G    
Sbjct: 1   SCYKFSTEK-LTWEEAQEYCRSLGGHLASIHSEEENDFLASLL--KKSSSSDVWIGLNDL 57

Query: 99  SPNLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSF 158
           S                          W   DG+ L +       EP      D +  S 
Sbjct: 58  SSE----------------------GTWKWSDGSPLVDYTNWAPGEPNPGGSEDCVVLSS 95

Query: 159 SQSLKRWGFERVTGMEPLLFICE 181
           S       +  V+    L FICE
Sbjct: 96  SSD---GKWNDVSCSSKLPFICE 115

CLECT: C-type lectin (CTL)/C-type lectin-like (CTLD) domain; protein domains homologous to the carbohydrate-recognition domains (CRDs) of the C-type lectins. This group is chiefly comprised of eukaryotic CTLDs, but contains some, as yet functionally uncharacterized, bacterial CTLDs. Many CTLDs are calcium-dependent carbohydrate binding modules; other CTLDs bind protein ligands, lipids, and inorganic surfaces, including CaCO3 and ice. Animal C-type lectins are involved in such functions as extracellular matrix organization, endocytosis, complement activation, pathogen recognition, and cell-cell interactions. For example: mannose-binding lectin and lung surfactant proteins A and D bind carbohydrates on surfaces (e.g. pathogens, allergens, necrotic, and apoptotic cells) and mediate functions associated with killing and phagocytosis; P (platlet)-, E (endothelial)-, and L (leukocyte)- selectins (sels) mediate the initial attachment, tethering, and rolling of lymphocytes on inflamed vascular walls enabling subsequent lymphocyte adhesion and transmigration. CTLDs may bind a variety of carbohydrate ligands including mannose, N-acetylglucosamine, galactose, N-acetylgalactosamine, and fucose. Several CTLDs bind to protein ligands, and only some of these binding interactions are Ca2+-dependent; including the CTLDs of Coagulation Factors IX/X (IX/X) and Von Willebrand Factor (VWF) binding proteins, and natural killer cell receptors. C-type lectins, such as lithostathine, and some type II antifreeze glycoproteins function in a Ca2+-independent manner to bind inorganic surfaces. Many proteins in this group contain a single CTLD; these CTLDs associate with each other through several different surfaces to form dimers, trimers, or tetramers, from which ligand-binding sites project in different orientations. Various vertebrate type 1 transmembrane proteins including macrophage mannose receptor, endo180, phospholipase A2 receptor, and dendritic and epithelial cell receptor (DEC205) have extracellular domains containing 8 or more CTLDs; these CTLDs remain in the parent model. In some members (IX/X and VWF binding proteins), a loop extends to the adjoining domain to form a loop-swapped dimer. A similar conformation is seen in the macrophage mannose receptor CRD4's putative non-sugar bound form of the domain in the acid environment of the endosome. Lineage specific expansions of CTLDs have occurred in several animal lineages including Drosophila melanogaster and Caenorhabditis elegans; these CTLDs also remain in the parent model. Length = 116

>gnl|CDD|187701 cd09277, RNase_HI_bacteria_HBD, Bacterial RNase HI containing a hybrid binding domain (HBD) at the N-terminus

 Score = 46.3 bits (111), Expect = 2e-06
 Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 12/86 (13%)

Query: 261 AIFYCIKKISDMKIKKAIIFSDNKSVLNGIDN----IQQRNNIIQLIKQEYYFASTNGSQ 316
           A+ Y ++      IKK  I+ D      GI+       + N       +E+        +
Sbjct: 56  AMEYAVEN----GIKKITIYYD----YEGIEKWATGEWKANKEGTKEYKEFMDKIKKKIK 107

Query: 317 ISFMWIPSHSNIALNDKADQLAKNSI 342
           ISF+ + +HS    N+ AD+LAK ++
Sbjct: 108 ISFVKVKAHSGDKYNELADKLAKKAL 133

Ribonuclease H (RNase H) enzymes are divided into two major families, Type 1 and Type 2, based on amino acid sequence similarities and biochemical properties. RNase H is an endonuclease that cleaves the RNA strand of an RNA/DNA hybrid in a sequence non-specific manner in the presence of divalent cations. RNase H is involved in DNA replication, repair and transcription. RNase H is widely present in various organisms, including bacteria, archaea and eukaryotes and most prokaryotic and eukaryotic genomes contain multiple RNase H genes. Despite the lack of amino acid sequence homology, Type 1 and type 2 RNase H share a main-chain fold and steric configurations of the four acidic active-site (DEDD) residues and have the same catalytic mechanism and functions in cells. One of the important functions of RNase H is to remove Okazaki fragments during DNA replication. Prokaryotic RNase H varies greatly in domain structures and substrate specificities. Prokaryotes and some single-cell eukaryotes do not require RNase H for viability. Some bacteria distinguished from other bacterial RNase HI in the presence of a hybrid binding domain (HBD) at the N-terminus which is commonly present at the N-termini of eukaryotic RNase HI. It has been reported that this domain is required for dimerization and processivity of RNase HI upon binding to RNA-DNA hybrids. Length = 133

>gnl|CDD|187704 cd09280, RNase_HI_eukaryote_like, Eukaryotic RNase H is longer and more complex than their prokaryotic counterparts and unlike prokaryote, RNase H are essential in higher eukaryote

 Score = 46.8 bits (112), Expect = 3e-06
 Identities = 25/101 (24%), Positives = 51/101 (50%), Gaps = 18/101 (17%)

Query: 257 AEAIAIFYCIKKISDMK--IKKAIIFSDNKSVLNGI-DNIQQ--RNN------------- 298
           AE  A+ + ++ I ++   + K +I +D++ V+NG+ + I +  +N              
Sbjct: 46  AELRAVIHALRLIKEVGEGLTKLVIATDSEYVVNGVTEWIPKWKKNGWKTSKGKPVANKD 105

Query: 299 IIQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAK 339
           +I+ + +        G ++ F  +P HS I  N++AD+LAK
Sbjct: 106 LIKELDKLLEELEERGIRVKFWHVPGHSGIYGNEEADRLAK 146

Ribonuclease H (RNase H) is classified into two families, type 1 (prokaryotic RNase HI, eukaryotic RNase H1 and viral RNase H) and type 2 (prokaryotic RNase HII and HIII, and eukaryotic RNase H2). RNase H is an endonuclease that cleaves the RNA strand of an RNA/DNA hybrid in a sequence non-specific manner. RNase H is involved in DNA replication, repair and transcription. One of the important functions of RNase H is to remove Okazaki fragments during DNA replication. RNase H is widely present in various organisms, including bacteria, archaea and eukaryote and most prokaryotic and eukaryotic genomes contain multiple RNase H genes. Despite the lack of amino acid sequence homology, Type 1 and type 2 RNase H share a main-chain fold and steric configurations of the four acidic active-site (DEDD) residues and have the same catalytic mechanism and functions in cells. Eukaryotic RNase H is longer and more complex than in prokaryotes. Almost all eukaryotic RNase HI have highly conserved regions at the N-terminal called hybrid binding domain (HBD). It is speculated that the HBD contributes to binding the RNA/DNA hybrid. Prokaryotes and some single-cell eukaryotes do not require RNase H for viability, but RNase H is essential in higher eukaryotes. RNase H knockout mice lack mitochondrial DNA replication and die as embryos. Length = 150

>gnl|CDD|218599 pfam05473, Herpes_UL45, UL45 protein

 Score = 43.3 bits (102), Expect = 7e-05
 Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 2/66 (3%)

Query: 8   LFIFV-SFHSVFSQTIDELEL-RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDL 65
           L +FV     VF+     LE   CP  W+   DSC R   +P  T  +A   C +  S L
Sbjct: 53  LTMFVIVATFVFTVPRMALESGPCPAEWIGLGDSCIRPDGTPADTYEEAVATCAAYPSKL 112

Query: 66  ANVNDA 71
              + A
Sbjct: 113 IPRSTA 118

This family consists several UL45 proteins. The herpes simplex virus UL45 gene encodes an 18 kDa virion envelope protein whose function remains unknown. It has been suggested that the 18 kDa UL45 gene product is required for efficient growth in the central nervous system at low doses and may play an important role under the conditions of a naturally acquired infection. This family also contains several Varicellovirus UL45 or gene 15 proteins. The Equine herpesvirus 1 UL45 protein represents a type II membrane glycoprotein which has found to be non-essential for EHV-1 growth in vitro but deletion reduces the viruses' replication efficiency. Length = 191

>gnl|CDD|153059 cd03589, CLECT_CEL-1_like, C-type lectin-like domain (CTLD) of the type found in CEL-1 from Cucumaria echinata and Echinoidin from Anthocidaris crassispina

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 7/59 (11%)

Query: 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDS-----DLANVNDADEHGFIMYQLF 82
          CP  W  +   CYRF      T  +A+L C+S         L +++  +E+ F+ Y LF
Sbjct: 1  CPTFWTAFGGYCYRFF-GDRLTWEEAELRCRSFSIPGLIAHLVSIHSQEENDFV-YDLF 57

CLECT_CEL-1_like: C-type lectin-like domain (CTLD) of the type found in CEL-1 from Cucumaria echinata and Echinoidin from Anthocidaris crassispina. CTLD refers to a domain homologous to the carbohydrate-recognition domains (CRDs) of the C-type lectins. The CEL-1 CTLD binds three calcium ions and has a high specificity for N-acteylgalactosamine (GalNAc). CEL-1 exhibits strong cytotoxicity which is inhibited by GalNAc. This protein may play a role as a toxin defending against predation. Echinoidin is found in the coelomic fluid of the sea urchin and is specific for GalBeta1-3GalNAc. Echinoidin has a cell adhesive activity towards human cancer cells which is not mediated through the CTLD. Both CEL-1 and Echinoidin are multimeric proteins comprised of multiple dimers linked by disulfide bonds. Length = 137

>gnl|CDD|223405 COG0328, RnhA, Ribonuclease HI [DNA replication, recombination, and repair]

 Score = 40.8 bits (96), Expect = 3e-04
 Identities = 18/95 (18%), Positives = 41/95 (43%), Gaps = 12/95 (12%)

Query: 257 AEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGID-------NIQQRNNIIQLIK----- 304
           AE  A+   ++ + ++   +  +++D+K V+ GI            +    + +K     
Sbjct: 46  AELRALIEALEALKELGACEVTLYTDSKYVVEGITRWIVKWKKNGWKTADKKPVKNKDLW 105

Query: 305 QEYYFASTNGSQISFMWIPSHSNIALNDKADQLAK 339
           +E          + + W+  H+    N++ADQLA+
Sbjct: 106 EELDELLKRHELVFWEWVKGHAGHPENERADQLAR 140

Length = 154

>gnl|CDD|205634 pfam13456, RVT_3, Reverse transcriptase-like

 Score = 39.1 bits (92), Expect = 4e-04
 Identities = 22/99 (22%), Positives = 41/99 (41%), Gaps = 18/99 (18%)

Query: 253 SIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGIDNIQQRN-------NIIQLIKQ 305
           S   AEA A+   ++   ++ I++ I+ SD++ V   +  IQ           +++ I++
Sbjct: 1   SPLEAEAEALLEGLQLALELGIRRLIVESDSQLV---VQQIQGEYEARSRLAALLREIRK 57

Query: 306 EYYFASTNGSQISFMWIPSHSNIALNDKADQLAKNSINS 344
                      +S   +P   N      AD LAK +  S
Sbjct: 58  ---LLKKF-DSVSVSHVPRECNRV----ADALAKLASAS 88

This domain is found in plants and appears to be part of a retrotransposon. Length = 88

>gnl|CDD|187703 cd09279, RNase_HI_archaeal_like, RNAse HI family that includes Archaeal RNase HI

 Score = 39.0 bits (92), Expect = 0.001
 Identities = 25/117 (21%), Positives = 44/117 (37%), Gaps = 25/117 (21%)

Query: 236 AFIINNENFQYR----LPHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGID 291
             I + +         L   A+   AE  A+   ++   ++ IKK  I+ D++ V+N I 
Sbjct: 20  IVIKSPDGEVLEQSIPLGFPATNNEAEYEALIAGLELALELGIKKLEIYGDSQLVVNQIQ 79

Query: 292 NIQQRNN---------IIQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAK 339
              +  N           +L+K+          ++   WIP   N     +AD LA 
Sbjct: 80  GEYEVKNERLAPYLEEARELLKK--------FEEVEIKWIPREENK----EADALAN 124

Ribonuclease H (RNase H) is classified into two evolutionarily unrelated families, type 1 (prokaryotic RNase HI, eukaryotic RNase H1 and viral RNase H) and type 2 (prokaryotic RNase HII and HIII, and eukaryotic RNase H2). RNase H is an endonuclease that cleaves the RNA strand of an RNA/DNA hybrid in a sequence non-specific manner. RNase H is involved in DNA replication, repair and transcription. RNase H is widely present in various organisms, including bacteria, archaea and eukaryotes and most prokaryotic and eukaryotic genomes contain multiple RNase H genes. Despite the lack of amino acid sequence homology, Type 1 and type 2 RNase H share a main-chain fold and steric configurations of the four acidic active-site (DEDD) residues and have the same catalytic mechanism and functions in cells. One of the important functions of RNase H is to remove Okazaki fragments during DNA replication. Most archaeal genomes contain only type 2 RNase H (RNase HII); however, a few contain RNase HI as well. Although archaeal RNase HI sequences conserve the DEDD active-site motif, they lack other common features important for catalytic function, such as the basic protrusion region. Archaeal RNase HI homologs are more closely related to retroviral RNase HI than bacterial and eukaryotic type I RNase H in enzymatic properties. Length = 128

>gnl|CDD|153064 cd03594, CLECT_REG-1_like, C-type lectin-like domain (CTLD) of the type found in Human REG-1 (lithostathine), REG-4, and avian eggshell-specific proteins: ansocalcin, structhiocalcin-1(SCA-1), and -2(SCA-2)

 Score = 38.9 bits (91), Expect = 0.001
 Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 15/89 (16%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSL--DSDLANVNDADEHGFIMYQLFWQDP 86
           CP+ W+ Y+ +CY + + P  + +DA+L C+     + LA+++   E   I   +     
Sbjct: 1   CPKGWLPYKGNCYGYFRQP-LSWSDAELFCQKYGPGAHLASIHSPAEAAAIASLI----- 54

Query: 87  QRRKWYFGGTQQSPNLWVNEDDP-QRRKW 114
                Y    Q    +W+   DP Q R W
Sbjct: 55  ---SSYQKAYQ---PVWIGLHDPQQSRGW 77

CLECT_REG-1_like: C-type lectin-like domain (CTLD) of the type found in Human REG-1 (lithostathine), REG-4, and avian eggshell-specific proteins: ansocalcin, structhiocalcin-1(SCA-1), and -2(SCA-2). CTLD refers to a domain homologous to the carbohydrate-recognition domains (CRDs) of the C-type lectins. REG-1 is a proliferating factor which participates in various kinds of tissue regeneration including pancreatic beta-cell regeneration, regeneration of intestinal mucosa, regeneration of motor neurons, and perhaps in tissue regeneration of damaged heart. REG-1 may play a role on the pathophysiology of Alzheimer's disease and in the development of gastric cancers. Its expression is correlated with reduced survival from early-stage colorectal cancer. REG-1 also binds and aggregates several bacterial strains from the intestinal flora and it has been suggested that it is involved in the control of the intestinal bacterial ecosystem. Rat lithostathine has calcium carbonate crystal inhibitor activity in vitro. REG-IV is unregulated in pancreatic, gastric, hepatocellular, and prostrate adenocarcinomas. REG-IV activates the EGF receptor/Akt/AP-1 signaling pathway in colorectal carcinoma. Ansocalcin, SCA-1 and -2 are found at high concentration in the calcified egg shell layer of goose and ostrich, respectively and tend to form aggregates. Ansocalcin nucleates calcite crystal aggregates in vitro. Length = 129

>gnl|CDD|222982 PHA03097, PHA03097, C-type lectin-like protein; Provisional

 Score = 38.3 bits (89), Expect = 0.002
 Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 1/70 (1%)

Query: 8  LFIFVSFHSVFSQTIDELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLAN 67
          L   V   S      D   L C   WV Y + CY F ++ +  ++ A   C  +D  L  
Sbjct: 25 LIALVIILSCKLSPGDRSGLNCRSGWVGYNNKCYTFSEN-ITNKHLAIERCADMDGILTL 83

Query: 68 VNDADEHGFI 77
          ++D  E  F+
Sbjct: 84 IDDQKEVLFV 93

Length = 157

>gnl|CDD|187702 cd09278, RNase_HI_prokaryote_like, RNase HI family found mainly in prokaryotes

 Score = 37.5 bits (88), Expect = 0.004
 Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 13/59 (22%)

Query: 281 SDNKSVLNGIDNIQQRNNIIQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAK 339
           +D K V N +D  Q+   +  L+ +          Q+++ W+  H+    N++AD+LA 
Sbjct: 90  ADGKPVKN-VDLWQE---LDALLAKH---------QVTWHWVKGHAGHPGNERADELAN 135

Ribonuclease H (RNase H) is classified into two evolutionarily unrelated families, type 1 (prokaryotic RNase HI, eukaryotic RNase H1 and viral RNase H) and type 2 (prokaryotic RNase HII and HIII, and eukaryotic RNase H2). RNase H is an endonuclease that cleaves the RNA strand of an RNA/DNA hybrid in a sequence non-specific manner. RNase H is involved in DNA replication, repair and transcription. RNase H is widely present in various organisms, including bacteria, archaea and eukaryotes and most prokaryotic and eukaryotic genomes contain multiple RNase H genes. Despite the lack of amino acid sequence homology, Type 1 and type 2 RNase H share a main-chain fold and steric configurations of the four acidic active-site (DEDD), residues and have the same catalytic mechanism and functions in cells. One of the important functions of RNase H is to remove Okazaki fragments during DNA replication. Prokaryotic RNase H varies greatly in domain structures and substrate specificities. Prokaryotes and some single-cell eukaryotes do not require RNase H for viability. Length = 139

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	483
cd03588	124	CLECT_CSPGs C-type lectin-like domain (CTLD) of th	99.91
cd03589	137	CLECT_CEL-1_like C-type lectin-like domain (CTLD)	99.91
cd03597	129	CLECT_attractin_like C-type lectin-like domain (CT	99.91
cd03594	129	CLECT_REG-1_like C-type lectin-like domain (CTLD)	99.91
cd03599	153	CLECT_DGCR2_like C-type lectin-like domain (CTLD)	99.91
cd03590	126	CLECT_DC-SIGN_like C-type lectin-like domain (CTLD	99.9
cd03596	129	CLECT_tetranectin_like C-type lectin-like domain (	99.89
COG0328	154	RnhA Ribonuclease HI [DNA replication, recombinati	99.89
cd03593	116	CLECT_NK_receptors_like C-type lectin-like domain	99.88
PRK06548	161	ribonuclease H; Provisional	99.88
PHA02642	216	C-type lectin-like protein; Provisional	99.87
PRK08719	147	ribonuclease H; Reviewed	99.85
cd03598	117	CLECT_EMBP_like C-type lectin-like domain (CTLD) o	99.85
PHA02953	170	IEV and EEV membrane glycoprotein; Provisional	99.85
PHA03097	157	C-type lectin-like protein; Provisional	99.84
PRK00203	150	rnhA ribonuclease H; Reviewed	99.84
cd03591	114	CLECT_collectin_like C-type lectin-like domain (CT	99.84
smart00034	126	CLECT C-type lectin (CTL) or carbohydrate-recognit	99.84
PF00075	132	RNase_H: RNase H; InterPro: IPR002156 The RNase H	99.83
cd03592	115	CLECT_selectins_like C-type lectin-like domain (CT	99.83
cd03601	119	CLECT_TC14_like C-type lectin-like domain (CTLD) o	99.82
TIGR00864	2740	PCC polycystin cation channel protein. Note: this	99.8
cd03603	118	CLECT_VCBS A bacterial subgroup of the C-type lect	99.8
cd03595	149	CLECT_chondrolectin_like C-type lectin-like domain	99.8
cd03600	141	CLECT_thrombomodulin_like C-type lectin-like domai	99.79
cd03602	108	CLECT_1 C-type lectin (CTL)/C-type lectin-like (CT	99.78
PHA02867	167	C-type lectin protein; Provisional	99.75
PRK13907	128	rnhA ribonuclease H; Provisional	99.73
cd06222	130	RnaseH RNase H (RNase HI) is an endonuclease that	99.73
KOG3752|consensus	371		99.68
cd00037	116	CLECT C-type lectin (CTL)/C-type lectin-like (CTLD	99.61
PRK07708	219	hypothetical protein; Validated	99.6
PF00059	105	Lectin_C: Lectin C-type domain; InterPro: IPR00130	99.52
PRK07238	372	bifunctional RNase H/acid phosphatase; Provisional	99.5
PHA02911	213	C-type lectin-like protein; Provisional	99.38
PF13456	87	RVT_3: Reverse transcriptase-like; PDB: 3ALY_A 2EH	99.29
PF05473	200	Herpes_UL45: UL45 protein; InterPro: IPR008646 Thi	98.91
PHA02672	166	ORF110 EEV glycoprotein; Provisional	97.56
PHA03093	185	EEV glycoprotein; Provisional	96.91
PHA02673	161	ORF109 EEV glycoprotein; Provisional	96.86
PF05966	190	Chordopox_A33R: Chordopoxvirus A33R protein; Inter	95.82
PF13966	86	zf-RVT: zinc-binding in reverse transcriptase	94.01
cd03519	91	Link_domain_HAPLN_module_2 Link_domain_HAPLN_modul	86.1

>cd03588 CLECT_CSPGs C-type lectin-like domain (CTLD) of the type found in chondroitin sulfate proteoglycan core proteins

Probab=99.91  E-value=1.5e-24  Score=185.84  Aligned_cols=121  Identities=19%  Similarity=0.422  Sum_probs=101.4

Q ss_pred             CcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccCc
Q psy14885         29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDD  108 (483)
Q Consensus        29 C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~~  108 (483)
                      ||+||+.|++.||+++..+ ++|.+|+..|+.+||+||+|+|++|++||..++.      ..+|||+++.          
T Consensus         1 Cp~gw~~~~~~Cy~~~~~~-~sw~~A~~~C~~~gg~La~i~s~~e~~fl~~~~~------~~~WIGl~~~----------   63 (124)
T cd03588           1 CEEGWDKFQGHCYRHFPDR-ETWEDAERRCREQQGHLSSIVTPEEQEFVNNNAQ------DYQWIGLNDR----------   63 (124)
T ss_pred             CCccceecCCEEEEEECCc-cCHHHHHHHHHhcCCEEeccCCHHHHHHHHHhcc------CcEEecceec----------
Confidence            9999999999999999995 9999999999999999999999999999988642      2345555432          


Q ss_pred             ccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCc--ccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885        109 PQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADN--VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS  183 (483)
Q Consensus       109 ~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~--~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~  183 (483)
                                  ...+.|.|+||+++.+  .+|.+ +|++.  ..++||++..... +.|.+.+|.  ..++|||||.
T Consensus        64 ------------~~~~~~~W~dg~~~~~--~~W~~~~p~~~~~~~~~Cv~~~~~~~-~~W~d~~C~--~~~~fICe~~  124 (124)
T cd03588          64 ------------TIEGDFRWSDGHPLQF--ENWRPNQPDNFFATGEDCVVMIWHEE-GEWNDVPCN--YHLPFTCKKG  124 (124)
T ss_pred             ------------CCCCceEeCCCCcccc--cCcCCCCCCCCCCCCCCeEEEecCCC-CeEcCCCCC--CCCeeeeeCC
Confidence                        2467899999999875  78999 99874  3579999864322 469999999  9999999974

CLECT_CSPGs: C-type lectin-like domain (CTLD) of the type found in chondroitin sulfate proteoglycan core proteins (CSPGs) in human and chicken aggrecan, frog brevican, and zebra fish dermacan. CTLD refers to a domain homologous to the carbohydrate-recognition domains (CRDs) of the C-type lectins. In cartilage, aggrecan forms cartilage link protein stabilized aggregates with hyaluronan (HA). These aggregates contribute to the tissue's load bearing properties. Aggregates having other CSPGs substituting for aggrecan may contribute to the structural integrity of many different tissues. Xenopus brevican is expressed in the notochord and the brain during early embryogenesis. Zebra fish dermacan is expressed in dermal bones and may play a role in dermal bone development. CSPGs do contain LINK domain(s) which bind HA. These LINK domains are considered by one classif

>cd03589 CLECT_CEL-1_like C-type lectin-like domain (CTLD) of the type found in CEL-1 from Cucumaria echinata and Echinoidin from Anthocidaris crassispina

Probab=99.91  E-value=3e-24  Score=187.26  Aligned_cols=127  Identities=19%  Similarity=0.407  Sum_probs=106.0

Q ss_pred             CcccccccCCeEEEEecCCCCCHHHHHHHhhhc-----CCcccccCCHhHHHHHHHHhhhc--CCCCCceeeecccCCCC
Q psy14885         29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSL-----DSDLANVNDADEHGFIMYQLFWQ--DPQRRKWYFGGTQQSPN  101 (483)
Q Consensus        29 C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~-----g~~L~~i~s~~e~~~l~~~~~~~--~~~~~~~wig~~~~~~~  101 (483)
                      ||+||+.|++.||+++... ++|.+|+..|+.+     ||+|++|+|++|++||..++...  ......||||+++..  
T Consensus         1 Cp~gw~~~~~~Cy~~~~~~-~~w~~A~~~C~~~~~~g~~~~La~i~s~~e~~~l~~~~~~~~~~~~~~~~WiGl~~~~--   77 (137)
T cd03589           1 CPTFWTAFGGYCYRFFGDR-LTWEEAELRCRSFSIPGLIAHLVSIHSQEENDFVYDLFESSRGPDTPYGLWIGLHDRT--   77 (137)
T ss_pred             CCcchhhhCCEEEEEeCCC-cCHHHHHHHHHhhcCCCCCceEcccCCHHHHHHHHHHHhhccccCCCCcEEEeeecCC--
Confidence            9999999999999999995 9999999999997     69999999999999999998754  223345555555322  


Q ss_pred             cccccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcc-cCCeEEEeccc-ccccccccccCCCCceee
Q psy14885        102 LWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNV-QRDYLAYSFSQ-SLKRWGFERVTGMEPLLF  178 (483)
Q Consensus       102 ~Wig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~-~~~Cv~~~~~~-~~~~W~~~~C~~~~~~~f  178 (483)
                                          .++.|.|+||+++.+  .+|.+ +|++.. .++|+++.... ....|++.+|+  ..++|
T Consensus        78 --------------------~~~~~~W~dG~~~~~--~~W~~~~P~~~~~~~~C~~~~~~~~~~~~W~d~~C~--~~~~f  133 (137)
T cd03589          78 --------------------SEGPFEWTDGSPVDF--TKWAGGQPDNYGGNEDCVQMWRRGDAGQSWNDMPCD--AVFPY  133 (137)
T ss_pred             --------------------ccCceEeCCcCcCCc--CCcCCCCCCCCCCCCCceeeecCCCCCCeecCCCCC--CCcce
Confidence                                578899999999876  88999 998754 68999997654 23469999999  99999


Q ss_pred             eeec
Q psy14885        179 ICEA  182 (483)
Q Consensus       179 vCe~  182 (483)
                      |||+
T Consensus       134 IC~~  137 (137)
T cd03589         134 ICKM  137 (137)
T ss_pred             eeeC
Confidence            9995

CLECT_CEL-1_like: C-type lectin-like domain (CTLD) of the type found in CEL-1 from Cucumaria echinata and Echinoidin from Anthocidaris crassispina. CTLD refers to a domain homologous to the carbohydrate-recognition domains (CRDs) of the C-type lectins. The CEL-1 CTLD binds three calcium ions and has a high specificity for N-acteylgalactosamine (GalNAc). CEL-1 exhibits strong cytotoxicity which is inhibited by GalNAc. This protein may play a role as a toxin defending against predation. Echinoidin is found in the coelomic fluid of the sea urchin and is specific for GalBeta1-3GalNAc. Echinoidin has a cell adhesive activity towards human cancer cells which is not mediated through the CTLD. Both CEL-1 and Echinoidin are multimeric proteins comprised of multiple dimers linked by disulfide bonds.

>cd03597 CLECT_attractin_like C-type lectin-like domain (CTLD) of the type found in human and mouse attractin (AtrN) and attractin-like protein (ALP)

Probab=99.91  E-value=4.1e-24  Score=184.28  Aligned_cols=125  Identities=22%  Similarity=0.368  Sum_probs=101.6

Q ss_pred             CcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcC--CCCCceeeecccCCCCccccc
Q psy14885         29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQD--PQRRKWYFGGTQQSPNLWVNE  106 (483)
Q Consensus        29 C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~--~~~~~~wig~~~~~~~~Wig~  106 (483)
                      ||+||..|++.||+++.. .++|.+|+.+|+++||+||+|++.+|++||..++....  .....+|||+++..       
T Consensus         1 Cp~gw~~~~~~Cy~~~~~-~~tw~~A~~~C~~~g~~La~i~~~~E~~fi~~~~~~~~~~~~~~~~WIGl~d~~-------   72 (129)
T cd03597           1 CGEGWHLVGNSCLKINTA-RESYDNAKLYCRNLNAVLASLTTQKKVEFVLKELQKHQMTKQKLTPWVGLRKIN-------   72 (129)
T ss_pred             CCCcCEEcCCEEEEEEcC-CCCHHHHHHHHHHcCCEEcCCCCHHHHHHHHHHHHhhcccCCCCceEEeeecCC-------
Confidence            999999999999999999 59999999999999999999999999999999886542  11234455554321       


Q ss_pred             CcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCc-eeeeeec
Q psy14885        107 DDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEP-LLFICEA  182 (483)
Q Consensus       107 ~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~-~~fvCe~  182 (483)
                                      .+.|+|+||+++.+..++|.+ +|++  .++||.+..... ..|+|.+|.  .. .+||||+
T Consensus        73 ----------------~g~w~W~Dgs~~~~~~~~W~~geP~~--~~~C~~~~~~~~-~~w~d~~C~--~~~~~~iCe~  129 (129)
T cd03597          73 ----------------VSYWCWEDMSPFTNTTLQWLPGEPSD--AGFCGYLEEPAV-SGLKANPCT--NPVNGSVCER  129 (129)
T ss_pred             ----------------CCceEECCCCCCCCccccCCCCCCCC--cccEEEEccccc-CccccCCcC--CCCcceeecC
Confidence                            467999999988542378999 9987  379999855433 369999999  88 6999996

CLECT_attractin_like: C-type lectin-like domain (CTLD) of the type found in human and mouse attractin (AtrN) and attractin-like protein (ALP). CTLD refers to a domain homologous to the carbohydrate-recognition domains (CRDs) of the C-type lectins. Mouse AtrN (the product of the mahogany gene) has been shown to bind Agouti protein and to function in agouti-induced pigmentation and obesity. Mutations in AtrN have also been shown to cause spongiform encephalopathy and hypomyelination in rats and hamsters. The cytoplasmic region of mouse ALP has been shown to binds to melanocortin receptor (MCR4). Signaling through MCR4 plays a role in appetite suppression. Attractin may have therapeutic potential in the treatment of obesity. Human attractin (hAtrN) has been shown to be expressed on activated T cells and released extracellularly. The

>cd03594 CLECT_REG-1_like C-type lectin-like domain (CTLD) of the type found in Human REG-1 (lithostathine), REG-4, and avian eggshell-specific proteins: ansocalcin, structhiocalcin-1(SCA-1), and -2(SCA-2)

Probab=99.91  E-value=4e-24  Score=184.49  Aligned_cols=126  Identities=22%  Similarity=0.442  Sum_probs=106.2

Q ss_pred             CcccccccCCeEEEEecCCCCCHHHHHHHhhhc--CCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccccc
Q psy14885         29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSL--DSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNE  106 (483)
Q Consensus        29 C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~--g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~  106 (483)
                      ||+||+.|++.||+++..+ ++|.+|+..|+.+  ||+||+|+|.+|++||..+++........||||+++..       
T Consensus         1 Cp~gw~~~~~~Cy~~~~~~-~tw~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~WiGl~~~~-------   72 (129)
T cd03594           1 CPKGWLPYKGNCYGYFRQP-LSWSDAELFCQKYGPGAHLASIHSPAEAAAIASLISSYQKAYQPVWIGLHDPQ-------   72 (129)
T ss_pred             CCCCCEecCCEeeeEeccC-cCHHHHHHHHHhcCCCceEcccCCHHHHHHHHHHHHhhccCCccEEEeeccCC-------
Confidence            9999999999999999995 9999999999999  59999999999999999998765433455677666433       


Q ss_pred             CcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885        107 DDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA  182 (483)
Q Consensus       107 ~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~  182 (483)
                                     ..+.|.|+||+++.+  .+|.+ +|. ...++||.+....+...|.+.+|+  ..++||||+
T Consensus        73 ---------------~~~~~~W~dg~~~~~--~~W~~~~p~-~~~~~Cv~~~~~~~~~~W~~~~C~--~~~~fICe~  129 (129)
T cd03594          73 ---------------QSRGWEWSDGSKLDY--RSWDRNPPY-ARGGYCAELSRSTGFLKWNDANCE--ERNPFICKY  129 (129)
T ss_pred             ---------------CCCceEeCCCCccee--cccCCCCCC-CCCCCceEEEecCCCCeEECCCCC--CCceeeeeC
Confidence                           457899999999865  78999 994 346899999765544469999999  999999985

CLECT_REG-1_like: C-type lectin-like domain (CTLD) of the type found in Human REG-1 (lithostathine), REG-4, and avian eggshell-specific proteins: ansocalcin, structhiocalcin-1(SCA-1), and -2(SCA-2). CTLD refers to a domain homologous to the carbohydrate-recognition domains (CRDs) of the C-type lectins. REG-1 is a proliferating factor which participates in various kinds of tissue regeneration including pancreatic beta-cell regeneration, regeneration of intestinal mucosa, regeneration of motor neurons, and perhaps in tissue regeneration of damaged heart. REG-1 may play a role on the pathophysiology of Alzheimer's disease and in the development of gastric cancers. Its expression is correlated with reduced survival from early-stage colorectal cancer. REG-1 also binds and aggregates

>cd03599 CLECT_DGCR2_like C-type lectin-like domain (CTLD) of the type found in DGCR2, an integral membrane protein deleted in DiGeorge Syndrome (DGS)

Probab=99.91  E-value=5e-24  Score=187.01  Aligned_cols=134  Identities=22%  Similarity=0.396  Sum_probs=103.5

Q ss_pred             CcccccccCC--eEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCC------CCCceeeecccCCC
Q psy14885         29 CPQHWVQYRD--SCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDP------QRRKWYFGGTQQSP  100 (483)
Q Consensus        29 C~~gw~~~~~--~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~------~~~~~wig~~~~~~  100 (483)
                      ||+||..|++  +||+++... +||.+|+..|+..||+||+|+|.+|++||..++.....      ....|||||++.- 
T Consensus         1 CP~gw~~~~~~~~CYk~~~~~-~tw~dA~~~C~~~Gg~Lasi~s~~e~~fl~~l~~~~~~~~~~~~~~~~~WIGL~~~~-   78 (153)
T cd03599           1 CPSGWHHYEGTASCYKVYLSG-ENYWDAVQTCQKVNGSLATFTTDQELQFILAQEWDFDERVFGRKDQCKFWVGYQYVI-   78 (153)
T ss_pred             CCCchhccCCCCeEEEEeCCc-CCHHHHHHHHHHcCCEEcCCCCHHHHHHHHHHHHhhcccccccccCCCEEEeecccc-
Confidence            9999999998  899999995 99999999999999999999999999999999865421      1134566664220 


Q ss_pred             CcccccCcccccccccCCcCCCCCccccC-CCCccccc--cccCCC-CCCCcccCCeEEEec-------ccccccccccc
Q psy14885        101 NLWVNEDDPQRRKWYFGGTQQSPNLWVNE-DGTNLNEL--DAAFLP-EPADNVQRDYLAYSF-------SQSLKRWGFER  169 (483)
Q Consensus       101 ~~Wig~~~~~~~~w~~~g~~~~~~~~~W~-dg~~~~~~--~~~w~~-~P~~~~~~~Cv~~~~-------~~~~~~W~~~~  169 (483)
                          -.++           ...++.|+|+ ||+++.|.  ..+|.+ +|++ ++++|+.+..       ......|+|.+
T Consensus        79 ----~~~~-----------~~~eg~w~WsddGs~~~y~~w~~~w~~gePn~-~~e~C~~~~~~~~~~~~~~~~~~W~d~~  142 (153)
T cd03599          79 ----TNRN-----------HSLEGRWEVAYKGSMEVFLPPEPIFATGMSTN-DNVFCAQLQCFQIPSLRERGLHSWHAEN  142 (153)
T ss_pred             ----cccC-----------cccCCeEEEecCCccceecCccccCCCCCCCC-CCCCCeEEEeeccccccccccCeeeCcc
Confidence                0011           1257899999 59988742  135688 8987 5689999962       22345799999


Q ss_pred             cCCCCceeeeeec
Q psy14885        170 VTGMEPLLFICEA  182 (483)
Q Consensus       170 C~~~~~~~fvCe~  182 (483)
                      |.  ...+||||+
T Consensus       143 C~--~~~~fiCq~  153 (153)
T cd03599         143 CY--EKSSFLCKR  153 (153)
T ss_pred             CC--CCCcceeCC
Confidence            99  999999996

CLECT_DGCR2_like: C-type lectin-like domain (CTLD) of the type found in DGCR2, an integral membrane protein deleted in DiGeorge Syndrome (DGS). CTLD refers to a domain homologous to the carbohydrate-recognition domains (CRDs) of the C-type lectins. DGS is also known velo-cardio-facial syndrome (VCFS). DGS is a genetic abnormality that results in malformations of the heart, face, and limbs and is associated with schizophrenia and depressive disorders. DGCR2 is a candidate for involvement in the pathogenesis of DGS since the DGCR2 gene lies within the minimal DGS critical region (MDGRC) of 22q11, which when deleted gives rise to DGS, and the DGCR2 gene is in close proximity to the balanced translocation breakpoint in a DGS patient having a balanced translocation.

>cd03590 CLECT_DC-SIGN_like C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)

Probab=99.90  E-value=1e-23  Score=181.10  Aligned_cols=123  Identities=25%  Similarity=0.537  Sum_probs=105.0

Q ss_pred             CcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccCc
Q psy14885         29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDD  108 (483)
Q Consensus        29 C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~~  108 (483)
                      ||.||+.|++.||+++..+ ++|.+|+..|+.+||+||+|+|.+|++||..++.    ....||||+++..         
T Consensus         1 Cp~~w~~~~~~Cy~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~----~~~~~WiGl~~~~---------   66 (126)
T cd03590           1 CPTNWKSFQSSCYFFSTEK-KSWEESRQFCEDMGAHLVIINSQEEQEFISKILS----GNRSYWIGLSDEE---------   66 (126)
T ss_pred             CCCCceEeCCEEEEEeCCC-cCHHHHHHHHHhCCCEEEeeCCHHHHHHHHHHhC----CCCCEEEeeecCC---------
Confidence            9999999999999999995 9999999999999999999999999999999885    3356666666432         


Q ss_pred             ccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcc--cCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885        109 PQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNV--QRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA  182 (483)
Q Consensus       109 ~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~--~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~  182 (483)
                                   .++.|.|.||+++.....+|.+ +|++..  .++|+.+....  +.|.+.+|+  ..++|||||
T Consensus        67 -------------~~~~~~W~dg~~~~~~~~~W~~~~p~~~~~~~~~C~~~~~~~--~~w~~~~C~--~~~~fiCek  126 (126)
T cd03590          67 -------------TEGEWKWVDGTPLNSSKTFWHPGEPNNWGGGGEDCAELVYDS--GGWNDVPCN--LEYRWICEK  126 (126)
T ss_pred             -------------CcCCeEecCCCCCCCccCCcCCCcCCCCCCCCCCCEEEECCC--CcEeCcCCC--CCEeeeeeC
Confidence                         4688999999988312288999 998763  68999997654  469999999  999999996

CLECT_DC-SIGN_like: C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR). This group also contains proteins similar to hepatic asialoglycoprotein receptor (ASGP-R) and langerin in human. These proteins are type II membrane proteins with a CTLD ectodomain. CTLD refers to a domain homologous to the carbohydrate-recognition domains (CRDs) of the C-type lectins. DC-SIGN is thought to mediate the initial contact between dendritic cells and resting T cells, and may also mediate the rolling of DCs on epithelium. DC-SIGN and DC-SIGNR bind to oligosaccharides present on human tissues, as well as, on path

>cd03596 CLECT_tetranectin_like C-type lectin-like domain (CTLD) of the type found in the tetranectin (TN), cartilage derived C-type lectin (CLECSF1), and stem cell growth factor (SCGF)

Probab=99.89  E-value=5.3e-23  Score=177.60  Aligned_cols=125  Identities=19%  Similarity=0.344  Sum_probs=103.2

Q ss_pred             CcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccCc
Q psy14885         29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDD  108 (483)
Q Consensus        29 C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~~  108 (483)
                      ||+|| .++++||+++..+ ++|.+|+..|+++||+||+|+|.+|+++|..+++........||||+++..         
T Consensus         1 c~~g~-~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~WiGl~~~~---------   69 (129)
T cd03596           1 CLKGT-KIHKKCYLVSEET-KHYHEASEDCIARGGTLATPRDSDENDALRDYVKASVPGNWEVWLGINDMV---------   69 (129)
T ss_pred             CCCCc-EECCEEEEEeccc-CCHHHHHHHHHhcCCeEecCCCHHHHHHHHHHHHhccCCCCcEEEeccccC---------
Confidence            89997 4478999999995 999999999999999999999999999999988765434455666665433         


Q ss_pred             ccccccccCCcCCCCCccccCCCCccccccccCC---C-CCCCcccCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885        109 PQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFL---P-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA  182 (483)
Q Consensus       109 ~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~---~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~  182 (483)
                                   .++.|.|+||+++.+  .+|.   + +|++...++|+++..... +.|.+.+|.  ..++||||.
T Consensus        70 -------------~~~~w~w~dG~~~~~--~~W~~~~~~~p~~~~~~~Cv~l~~~~~-~~W~d~~C~--~~~~fICe~  129 (129)
T cd03596          70 -------------AEGKWVDVNGSPISY--FNWEREITAQPDGGKRENCVALSSSAQ-GKWFDEDCR--REKPYVCEF  129 (129)
T ss_pred             -------------ccCeEEeCCCCCccc--cccCCCCCCCCCCCCCCCCEEEccCCC-CcCcCccCC--CCCceeccC
Confidence                         577899999999876  8899   3 787655689999976422 369999999  999999984

CLECT_tetranectin_like: C-type lectin-like domain (CTLD) of the type found in the tetranectin (TN), cartilage derived C-type lectin (CLECSF1), and stem cell growth factor (SCGF). CTLD refers to a domain homologous to the carbohydrate-recognition domains (CRDs) of the C-type lectins. TN binds to plasminogen and stimulates activation of plasminogen, playing a key role in the regulation of proteolytic processes. The TN CTLD binds two calcium ions. Its calcium free form binds to various kringle-like protein ligands. Two residues involved in the coordination of calcium are critical for the binding of TN to the fourth kringle (K4) domain of plasminogen (Plg K4). TN binds the kringle 1-4 form of angiostatin (AST K1-4). AST K1-4 is a fragment of Plg, commonly found in cancer tissues. TN inhibits the bin

>COG0328 RnhA Ribonuclease HI [DNA replication, recombination, and repair]

Probab=99.89  E-value=2e-22  Score=174.13  Aligned_cols=125  Identities=17%  Similarity=0.229  Sum_probs=101.5

Q ss_pred             ceEe-eCCCCC--CCceEEEEEeCCCEEE--eC-CCCCcchHHHHHHHHHHHHHhHhcCCceEEEEeccHHHHHhhccc-
Q psy14885        221 DVVF-DLSKRN--SNTGFAFIINNENFQY--RL-PHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGIDNI-  293 (483)
Q Consensus       221 ~~~~-DgS~~~--~~~G~g~~~~~~~~~~--~l-~~~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs~~~~~~l~~~-  293 (483)
                      ..+| |||+.+  |+.|+|+|+..+...+  .. ...+||++||+.|++.||+.+.+.+...|.|+||||+|+++|..- 
T Consensus         4 v~if~DGa~~gNpG~gG~g~vl~~~~~~~~~s~~~~~tTNNraEl~A~i~AL~~l~~~~~~~v~l~tDS~yv~~~i~~w~   83 (154)
T COG0328           4 VEIFTDGACLGNPGPGGWGAVLRYGDGEKELSGGEGRTTNNRAELRALIEALEALKELGACEVTLYTDSKYVVEGITRWI   83 (154)
T ss_pred             eEEEecCccCCCCCCceEEEEEEcCCceEEEeeeeecccChHHHHHHHHHHHHHHHhcCCceEEEEecHHHHHHHHHHHH
Confidence            4456 999977  9999999998544332  22 248999999999999999999998899999999999999999831 


Q ss_pred             --CCcc---------hHHHHHHHHHHHHhhCCCceEEEEeccCCCCcchHHHhHHHHhhhcCC
Q psy14885        294 --QQRN---------NIIQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAKNSINSK  345 (483)
Q Consensus       294 --~~~~---------~~~~~i~~~~~~~~~~~~~v~~~WvpgH~g~~gNe~AD~lAk~a~~~~  345 (483)
                        ++..         --...+++.+.++..+...|.++|||||+|.++||.||+||+.|+...
T Consensus        84 ~~w~~~~w~~~~~~pvkn~dl~~~~~~~~~~~~~v~~~WVkgH~g~~~NeraD~LA~~~~~~~  146 (154)
T COG0328          84 VKWKKNGWKTADKKPVKNKDLWEELDELLKRHELVFWEWVKGHAGHPENERADQLAREAARAA  146 (154)
T ss_pred             hhccccCccccccCccccHHHHHHHHHHHhhCCeEEEEEeeCCCCChHHHHHHHHHHHHHHhh
Confidence              1111         112456777788888888999999999999999999999999998765

>cd03593 CLECT_NK_receptors_like C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

Probab=99.88  E-value=1.6e-22  Score=171.20  Aligned_cols=115  Identities=27%  Similarity=0.516  Sum_probs=98.2

Q ss_pred             CcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccCc
Q psy14885         29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDD  108 (483)
Q Consensus        29 C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~~  108 (483)
                      ||+||+.|++.||+++... ++|.+|+..|+.+||+|++|+|.+|++||..++     ....+|||+++..         
T Consensus         1 Cp~gw~~~~~~Cy~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~-----~~~~~WiGl~~~~---------   65 (116)
T cd03593           1 CPKDWICYGNKCYYFSMEK-KTWNESKEACSSKNSSLLKIDDEEELEFLQSQI-----GSSSYWIGLSREK---------   65 (116)
T ss_pred             CCCcCEEeCCEEEEEEcCC-CCHHHHHHHHHhCCCcEEEECCHHHHHHHHHhc-----CCCceEEEEeecC---------
Confidence            9999999999999999995 999999999999999999999999999999987     2345666665432         


Q ss_pred             ccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885        109 PQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA  182 (483)
Q Consensus       109 ~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~  182 (483)
                                   .++.|.|+||+++.    +|.. +|++ ..++|+.+...    .|.+.+|.  ..++|||||
T Consensus        66 -------------~~~~~~W~dg~~~~----~~~~~~~~~-~~~~C~~~~~~----~w~~~~C~--~~~~~IC~k  116 (116)
T cd03593          66 -------------SEKPWKWIDGSPLN----NLFNIRGST-KSGNCAYLSST----GIYSEDCS--TKKRWICEK  116 (116)
T ss_pred             -------------CCCCeEccCCCccc----ccccccCCC-CCCCceEEcCC----cEEcccCC--cCceeeeeC
Confidence                         46899999999875    4666 7765 56899998653    49999999  999999997

CLECT_NK_receptors_like: C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs), including proteins similar to oxidized low density lipoprotein (OxLDL) receptor (LOX-1), CD94, CD69, NKG2-A and -D, osteoclast inhibitory lectin (OCIL), dendritic cell-associated C-type lectin-1 (dectin-1), human myeloid inhibitory C-type lectin-like receptor (MICL), mast cell-associated functional antigen (MAFA), killer cell lectin-like receptors: subfamily F, member 1 (KLRF1) and subfamily B, member 1 (KLRB1), and lys49 receptors. CTLD refers to a domain homologous to the carbohydrate-recognition domains (CRDs) of the C-type lectins. NKRs are variously associated with activation or inhibition of natural killer (NK) cells. Activating NKRs stimulate cytolysis by NK cells of virally infected or transformed cells; inhibitory NKRs block cytolysis up

>PRK06548 ribonuclease H; Provisional

Probab=99.88  E-value=4.7e-22  Score=175.28  Aligned_cols=124  Identities=23%  Similarity=0.281  Sum_probs=95.6

Q ss_pred             CcceEe-eCCCCC--CCceEEEEEeCCCEEEeCCCCCcchHHHHHHHHHHHHHhHhcCCceEEEEeccHHHHHhhcc---
Q psy14885        219 PTDVVF-DLSKRN--SNTGFAFIINNENFQYRLPHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGIDN---  292 (483)
Q Consensus       219 p~~~~~-DgS~~~--~~~G~g~~~~~~~~~~~l~~~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs~~~~~~l~~---  292 (483)
                      ...++| ||++.+  |+.|+|+++.+..........+||++|||+||+.||+.+.. ...++.|+|||++|+++|+.   
T Consensus         4 ~~~~IytDGa~~gnpg~~G~g~~~~~~~~~~g~~~~~TNnraEl~Aii~aL~~~~~-~~~~v~I~TDS~yvi~~i~~W~~   82 (161)
T PRK06548          4 NEIIAATDGSSLANPGPSGWAWYVDENTWDSGGWDIATNNIAELTAVRELLIATRH-TDRPILILSDSKYVINSLTKWVY   82 (161)
T ss_pred             CEEEEEEeeccCCCCCceEEEEEEeCCcEEccCCCCCCHHHHHHHHHHHHHHhhhc-CCceEEEEeChHHHHHHHHHHHH
Confidence            345677 999976  89999999876543333345789999999999999986642 44579999999999999984   


Q ss_pred             -----cCC---cchHH-HHHHHHHHHHhhCCCceEEEEeccCCCCcchHHHhHHHHhhhcC
Q psy14885        293 -----IQQ---RNNII-QLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAKNSINS  344 (483)
Q Consensus       293 -----~~~---~~~~~-~~i~~~~~~~~~~~~~v~~~WvpgH~g~~gNe~AD~lAk~a~~~  344 (483)
                           .++   +.++. +++++.+..+... ..|+|.|||||+|++|||.||+||++|+..
T Consensus        83 ~Wk~~gWk~s~G~pV~N~dL~~~l~~l~~~-~~v~~~wVkgHsg~~gNe~aD~LA~~aa~~  142 (161)
T PRK06548         83 SWKMRKWRKADGKPVLNQEIIQEIDSLMEN-RNIRMSWVNAHTGHPLNEAADSLARQAANN  142 (161)
T ss_pred             HHHHCCCcccCCCccccHHHHHHHHHHHhc-CceEEEEEecCCCCHHHHHHHHHHHHHHHH
Confidence                 222   23333 4555566666554 479999999999999999999999998855

>PHA02642 C-type lectin-like protein; Provisional

Probab=99.87  E-value=1.2e-21  Score=178.56  Aligned_cols=133  Identities=20%  Similarity=0.375  Sum_probs=106.0

Q ss_pred             cccCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcc
Q psy14885         24 ELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLW  103 (483)
Q Consensus        24 ~~~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~W  103 (483)
                      ..+..||.||..|+++||+|+.. ..+|.+|+..|+++||+|+.|+|++|++||+.+..     ...||||+++..    
T Consensus        83 ~k~~~CP~gW~~~~~kCYyfs~~-~ksW~eA~~~C~s~ga~La~I~seeE~~FL~~~~~-----~~~yWIGLsd~~----  152 (216)
T PHA02642         83 IKYVTCPKGWIGFGYKCFYFSED-SKNWTFGNTFCTSLGATLVKVETEEELNFLKRYKD-----SSDHWIGLNRES----  152 (216)
T ss_pred             cccCCCCCcCEEECCEEEEEeCc-ccCHHHHHHHHhhCCCeEeeECCHHHHHHHHHhhc-----CCeEEEEeEeCC----
Confidence            34678999999999999999999 49999999999999999999999999999998642     234666666533    


Q ss_pred             cccCcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885        104 VNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS  183 (483)
Q Consensus       104 ig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~  183 (483)
                                        .++.|.|+||+++..  .+|.     .+.++|+.+...    ++.+..|.  ..+.+||+|.
T Consensus       153 ------------------~e~~W~WvDGS~~n~--~~~i-----~G~g~CAyLs~~----~i~s~~C~--~~~~wIC~K~  201 (216)
T PHA02642        153 ------------------SNHPWKWADNSNYNA--SFVI-----TGTGECAYLNDI----RISSSRVY--ANRKWICSKT  201 (216)
T ss_pred             ------------------CCCceEECCCCccCc--ceec-----cCCCceEEEeCC----ceEccCcC--CCceEEeeee
Confidence                              578899999998865  4453     235799998543    58999999  9999999999


Q ss_pred             hhhhhhhccccccccc
Q psy14885        184 IQKLHYLLNDDRTYQY  199 (483)
Q Consensus       184 ~~~~~~~~~~~~~~~y  199 (483)
                      ..+  ..++.+.+|.|
T Consensus       202 l~~--~~~~~~~~~~~  215 (216)
T PHA02642        202 YTN--IYIPSNNSYNY  215 (216)
T ss_pred             ccc--eEccCCCCCCC
Confidence            543  23444555555

>PRK08719 ribonuclease H; Reviewed

Probab=99.85  E-value=7.5e-21  Score=166.43  Aligned_cols=118  Identities=17%  Similarity=0.221  Sum_probs=89.6

Q ss_pred             ceEe-eCCCCC--C---CceEEEEEeCCC------EEEeCCCCCcchHHHHHHHHHHHHHhHhcCCceEEEEeccHHHHH
Q psy14885        221 DVVF-DLSKRN--S---NTGFAFIINNEN------FQYRLPHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLN  288 (483)
Q Consensus       221 ~~~~-DgS~~~--~---~~G~g~~~~~~~------~~~~l~~~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs~~~~~  288 (483)
                      .++| |||+.+  +   ++|+|+++....      ....+...+||++|||.||+.||+.+.+.    ..|+|||++|++
T Consensus         5 ~~iYtDGs~~~n~~~~~~~G~G~vv~~~~~~~~~~~~~~~~~~~Tnn~aEl~A~~~aL~~~~~~----~~i~tDS~yvi~   80 (147)
T PRK08719          5 YSIYIDGAAPNNQHGCVRGGIGLVVYDEAGEIVDEQSITVNRYTDNAELELLALIEALEYARDG----DVIYSDSDYCVR   80 (147)
T ss_pred             EEEEEecccCCCCCCCCCcEEEEEEEeCCCCeeEEEEecCCCCccHHHHHHHHHHHHHHHcCCC----CEEEechHHHHH
Confidence            3455 999965  3   469999876532      22334566899999999999999998643    379999999999


Q ss_pred             hh--------cccCCcc---hH-HHHHHHHHHHHhhCCCceEEEEeccCCCCcchHHHhHHHHhhhc
Q psy14885        289 GI--------DNIQQRN---NI-IQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAKNSIN  343 (483)
Q Consensus       289 ~l--------~~~~~~~---~~-~~~i~~~~~~~~~~~~~v~~~WvpgH~g~~gNe~AD~lAk~a~~  343 (483)
                      +|        ++++..+   ++ ...+++.+..+.+ ...|+|.|||||+|++|||.||+||++|+.
T Consensus        81 ~i~~~~~~W~~~~w~~s~g~~v~n~dl~~~i~~l~~-~~~i~~~~VkgH~g~~~Ne~aD~lA~~a~~  146 (147)
T PRK08719         81 GFNEWLDTWKQKGWRKSDKKPVANRDLWQQVDELRA-RKYVEVEKVTAHSGIEGNEAADMLAQAAAE  146 (147)
T ss_pred             HHHHHHHHHHhCCcccCCCcccccHHHHHHHHHHhC-CCcEEEEEecCCCCChhHHHHHHHHHHHhh
Confidence            99        4455421   11 2455566666655 567999999999999999999999999875

>cd03598 CLECT_EMBP_like C-type lectin-like domain (CTLD) of the type found in the human proteins, eosinophil major basic protein (EMBP) and prepro major basic protein homolog (MBPH)

Probab=99.85  E-value=4.2e-21  Score=162.73  Aligned_cols=115  Identities=23%  Similarity=0.371  Sum_probs=95.3

Q ss_pred             CeEEEEecCCCCCHHHHHHHhhh-cCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccCccccccccc
Q psy14885         38 DSCYRFVKSPLKTRNDAKLNCKS-LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYF  116 (483)
Q Consensus        38 ~~Cy~~~~~~~~tw~~A~~~C~~-~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~~~~~~~w~~  116 (483)
                      ++||+++..+ ++|.+|+..|+. .||+||+|+|++|++||..+++..  ....+|||+....                 
T Consensus         1 ~~Cy~~~~~~-~t~~~A~~~C~~~~g~~La~i~s~~e~~~l~~~~~~~--~~~~~WiGl~~~~-----------------   60 (117)
T cd03598           1 GRCYRFVKSP-RTFRDAQVICRRCYRGNLASIHSFAFNYRVQRLVSTL--NQAQVWIGGIITG-----------------   60 (117)
T ss_pred             CceEEEecCC-CCHHHHHHHhhcCCCceEeeecChhHhHHHHHHHhCC--CCCCEEEeeEcCC-----------------
Confidence            4799999996 999999999999 599999999999999999998543  2345677766431                 


Q ss_pred             CCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885        117 GGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA  182 (483)
Q Consensus       117 ~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~  182 (483)
                         ....+.|.|+||+++.+  .+|.+ +|++ +.++|+.+....  +.|++.+|+  .+++||||.
T Consensus        61 ---~~~~~~~~W~dg~~~~y--~~W~~g~p~~-~~~~Cv~~~~~~--g~W~~~~C~--~~~~fiC~~  117 (117)
T cd03598          61 ---KGRCRRFSWVDGSVWNY--AYWAPGQPGN-RRGHCVELCTRG--GHWRRAHCK--LRRPFICSY  117 (117)
T ss_pred             ---CCcCCeeEeCCCCccCc--CCCCCCCCCC-CCCCcEEEeCCC--CeECCCcCC--CCceeeecC
Confidence               12468899999999876  78999 9987 568999997543  369999999  999999984

CLECT_EMBP_like: C-type lectin-like domain (CTLD) of the type found in the human proteins, eosinophil major basic protein (EMBP) and prepro major basic protein homolog (MBPH). CTLD refers to a domain homologous to the carbohydrate-recognition domains (CRDs) of the C-type lectins. Eosinophils and basophils carry out various functions in allergic, parasitic, and inflammatory diseases. EMBP is stored in eosinophil crystalloid granules and is released upon degranulation. EMBP is also expressed in basophils. The proform of EMBP is expressed in placental X cells and breast tissue and increases significantly during human pregnancy. EMBP has cytotoxic properties and damages bacteria and mammalian cells, in vitro, as well as, helminth parasites. EMBP deposition has been observed in the inflamed tissue of all

>PHA02953 IEV and EEV membrane glycoprotein; Provisional

Probab=99.85  E-value=7.9e-21  Score=169.43  Aligned_cols=119  Identities=13%  Similarity=0.245  Sum_probs=90.2

Q ss_pred             cCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885         26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN  105 (483)
Q Consensus        26 ~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig  105 (483)
                      ...||+||..|+++||+++... ++|.+|+..|+.+||+|+.++  +|+.|+..+..     ...||||+++        
T Consensus        44 ~~~CP~GW~~~~~~CYk~f~~~-~tW~~A~~~C~~~Gg~L~~~~--~e~~fv~~~~~-----~~~~WIGL~d--------  107 (170)
T PHA02953         44 PSACAKGWIPYDNYCYLDTNIQ-LSTYGAVYLCNKYRARLPKPN--FRHLKVLSLTY-----GKDFWVSLKK--------  107 (170)
T ss_pred             cCcCcccChhhCCEEEEEECCc-CCHHHHHHHHHhcCCCCCCCc--HHHHHHHHhcc-----CCCEEEeEEC--------
Confidence            5779999999999999999994 999999999999999997766  66788876542     2235555553        


Q ss_pred             cCcccccccccCCcCCCCCccccCCCC-ccccc----cccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeee
Q psy14885        106 EDDPQRRKWYFGGTQQSPNLWVNEDGT-NLNEL----DAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFIC  180 (483)
Q Consensus       106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~-~~~~~----~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvC  180 (483)
                                      .++.|.|.||. .+.+.    ..+|.++|++ +.++|+.+..    ..|+|.+|.  ...+|||
T Consensus       108 ----------------~eg~W~w~Dggs~~~y~~~~~~~~w~~~~~~-~~e~C~~~~~----~~W~d~~C~--~~~~fIC  164 (170)
T PHA02953        108 ----------------KNNRWLDINTNKTVDMNKNTELKKIKSKTKN-DNEACYIYKS----GELKETVCN--SVNYIIC  164 (170)
T ss_pred             ----------------CCCceEeCCCCeeeccccccccccccCCCCC-CCCCceEEeC----CeEEeccCC--CCcEEEE
Confidence                            25678888864 44321    1336655544 5689998743    259999999  9999999


Q ss_pred             ecc
Q psy14885        181 EAS  183 (483)
Q Consensus       181 e~~  183 (483)
                      ||+
T Consensus       165 qk~  167 (170)
T PHA02953        165 VKR  167 (170)
T ss_pred             EEe
Confidence            986

>PHA03097 C-type lectin-like protein; Provisional

Probab=99.84  E-value=1.6e-20  Score=166.00  Aligned_cols=114  Identities=18%  Similarity=0.334  Sum_probs=91.0

Q ss_pred             cCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885         26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN  105 (483)
Q Consensus        26 ~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig  105 (483)
                      ...||+||+.|+++||+++.. .++|.+|+..|+++||+|+.|++++|++||..++.     ...||||+++..      
T Consensus        43 ~~~CP~gW~~~~~~CY~~s~~-~~sW~~A~~~C~~~g~~La~I~~~~E~~fi~~~~~-----~~~~WIGL~d~~------  110 (157)
T PHA03097         43 GLNCRSGWVGYNNKCYTFSEN-ITNKHLAIERCADMDGILTLIDDQKEVLFVSRYKG-----GQDLWIGIEKKK------  110 (157)
T ss_pred             CCCCCCCceeeCCEEEEEecC-CCcHHHHHHHHHhCCCEEeeeCCHHHHHHHHHhcC-----CCCEEEeeecCC------
Confidence            567999999999999999999 49999999999999999999999999999998762     234666665432      


Q ss_pred             cCcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeecch
Q psy14885        106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASI  184 (483)
Q Consensus       106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~~  184 (483)
                                        .   |+||++..   .+|. +|.  ++++|+.+...    .|+|.+|.  ..++||||+++
T Consensus       111 ------------------~---W~dgs~~~---~~~~-~~~--~~e~Cv~i~~~----~w~d~~C~--~~~~~ICek~~  156 (157)
T PHA03097        111 ------------------G---DDDDREVL---DKVV-KPP--KSGKCAYLKDK----TIISSNCN--ATKGWICFDRL  156 (157)
T ss_pred             ------------------C---ccCCCccc---cccc-CCC--CCCCEEEEECC----cEEeCCCC--CCeeEEEeecC
Confidence                              1   88887653   2332 222  35899988542    49999999  99999999974

>PRK00203 rnhA ribonuclease H; Reviewed

Probab=99.84  E-value=1.3e-20  Score=166.54  Aligned_cols=124  Identities=17%  Similarity=0.244  Sum_probs=92.7

Q ss_pred             ceEe-eCCCCC--CCceEEEEEeCCCEEEeC---CCCCcchHHHHHHHHHHHHHhHhcCCceEEEEeccHHHHHhhcc--
Q psy14885        221 DVVF-DLSKRN--SNTGFAFIINNENFQYRL---PHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGIDN--  292 (483)
Q Consensus       221 ~~~~-DgS~~~--~~~G~g~~~~~~~~~~~l---~~~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs~~~~~~l~~--  292 (483)
                      .++| |||+.+  +..|+|+++...+....+   ....||++|||.||+.||+.+.+  ...+.|+|||+++++.|..  
T Consensus         4 v~iytDGs~~~n~~~~g~g~v~~~~~~~~~~~~~~~~~TN~~aEL~Ai~~AL~~~~~--~~~v~I~tDS~yvi~~i~~w~   81 (150)
T PRK00203          4 VEIYTDGACLGNPGPGGWGAILRYKGHEKELSGGEALTTNNRMELMAAIEALEALKE--PCEVTLYTDSQYVRQGITEWI   81 (150)
T ss_pred             EEEEEEecccCCCCceEEEEEEEECCeeEEEecCCCCCcHHHHHHHHHHHHHHHcCC--CCeEEEEECHHHHHHHHHHHH
Confidence            4566 999975  788999988654432211   35789999999999999998863  4689999999999999985  


Q ss_pred             ------cCCc---chHH-HHHHHHHHHHhhCCCceEEEEeccCCCCcchHHHhHHHHhhhcCCCC
Q psy14885        293 ------IQQR---NNII-QLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAKNSINSKLL  347 (483)
Q Consensus       293 ------~~~~---~~~~-~~i~~~~~~~~~~~~~v~~~WvpgH~g~~gNe~AD~lAk~a~~~~~~  347 (483)
                            .+..   .++. ..+++.+..+.. ...|.|.|||||+|++||+.||+|||+|+....+
T Consensus        82 ~~Wk~~~~~~~~g~~v~n~dl~~~i~~l~~-~~~v~~~wV~~H~~~~~N~~AD~lA~~a~~~~~~  145 (150)
T PRK00203         82 HGWKKNGWKTADKKPVKNVDLWQRLDAALK-RHQIKWHWVKGHAGHPENERCDELARAGAEEATL  145 (150)
T ss_pred             HHHHHcCCcccCCCccccHHHHHHHHHHhc-cCceEEEEecCCCCCHHHHHHHHHHHHHHHHhhh
Confidence                  2221   1221 233444444443 3789999999999999999999999999876544

>cd03591 CLECT_collectin_like C-type lectin-like domain (CTLD) of the type found in human collectins including lung surfactant proteins A and D, mannose- or mannan binding lectin (MBL), and CL-L1 (collectin liver 1)

Probab=99.84  E-value=1.3e-20  Score=158.96  Aligned_cols=111  Identities=22%  Similarity=0.269  Sum_probs=93.3

Q ss_pred             eEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccCcccccccccCC
Q psy14885         39 SCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGG  118 (483)
Q Consensus        39 ~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~~~~~~~w~~~g  118 (483)
                      +||+++..+ ++|.+|+.+|+.+||+||+|+|.+|++||..++..   ....+|||+++.                    
T Consensus         2 k~y~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~---~~~~~WiGl~~~--------------------   57 (114)
T cd03591           2 KIFVTNGEE-KNFDDAQKLCSEAGGTLAMPRNAAENAAIASYVKK---GNTYAFIGITDL--------------------   57 (114)
T ss_pred             cEEEeCCce-eCHHHHHHHHhhcCCEEecCCCHHHHHHHHHHHhc---CCccEEEecccC--------------------
Confidence            699999995 99999999999999999999999999999999864   234455555532                    


Q ss_pred             cCCCCCccccCCCCccccccccCCC-CCCCcc-cCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885        119 TQQSPNLWVNEDGTNLNELDAAFLP-EPADNV-QRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA  182 (483)
Q Consensus       119 ~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~-~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~  182 (483)
                        ..++.|.|+||+++.+  .+|.+ +|++.+ .++|+.+.. .  +.|.+.+|+  ..++||||.
T Consensus        58 --~~~~~~~w~dg~~~~y--~~W~~~ep~~~~~~~~Cv~~~~-~--~~W~~~~C~--~~~~fICe~  114 (114)
T cd03591          58 --ETEGQFVYLDGGPLTY--TNWKPGEPNNAGGGEDCVEMYT-S--GKWNDVACN--LTRLFVCEF  114 (114)
T ss_pred             --CcCCcEEeCCCCCccc--CCcCCCCCCCCCCCCCeEEECC-C--CcCcCccCC--CCeeEEeeC
Confidence              2578899999999965  89999 998765 579999973 2  369999999  999999984

CLECT_collectin_like: C-type lectin-like domain (CTLD) of the type found in human collectins including lung surfactant proteins A and D, mannose- or mannan binding lectin (MBL), and CL-L1 (collectin liver 1). CTLD refers to a domain homologous to the carbohydrate-recognition domains (CRDs) of the C-type lectins. The CTLDs of these collectins bind carbohydrates on surfaces (e.g. pathogens, allergens, necrotic, or apoptotic cells) and mediate functions associated with killing and phagocytosis. MBPs recognize high mannose oligosaccharides in a calcium dependent manner, bind to a broad range of pathogens, and trigger cell killing by activating the complement pathway. MBP also acts directly as an opsonin. SP-A and SP-D in addition to functioning as host defense components, a

>smart00034 CLECT C-type lectin (CTL) or carbohydrate-recognition domain (CRD)

Probab=99.84  E-value=1.7e-20  Score=160.20  Aligned_cols=125  Identities=28%  Similarity=0.565  Sum_probs=102.8

Q ss_pred             CcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccCc
Q psy14885         29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDD  108 (483)
Q Consensus        29 C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~~  108 (483)
                      ||+||+.+++.||+++... ++|.+|+..|+.+||+|++|++.+|++||..++.........||||++..          
T Consensus         1 Cp~~w~~~~~~Cy~~~~~~-~~~~~A~~~C~~~~~~La~i~~~~e~~~i~~~~~~~~~~~~~~WiG~~~~----------   69 (126)
T smart00034        1 CPSGWISYGGKCYKFSTEK-KTWADAQAFCQSLGAHLASIHSEAENDFVASLLKNSGSNSDYYWIGLSDP----------   69 (126)
T ss_pred             CCcchhhhCCEEEEEECCc-cCHHHHHHHHHhcCCEEcccCCHHHHHHHHHHHHhhcCCCCCEEEecCcc----------
Confidence            8999999999999999995 99999999999999999999999999999999876533345566666542          


Q ss_pred             ccccccccCCcCCCCCccccCCCCc-cccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeee
Q psy14885        109 PQRRKWYFGGTQQSPNLWVNEDGTN-LNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICE  181 (483)
Q Consensus       109 ~~~~~w~~~g~~~~~~~~~W~dg~~-~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe  181 (483)
                                  ...+.|.|+||.+ ..+  .+|.+.|+....++|+.+..... ..|.+.+|.  ...+||||
T Consensus        70 ------------~~~~~~~W~dg~~~~~~--~~w~~~~~~~~~~~C~~~~~~~~-~~w~~~~C~--~~~~~ICe  126 (126)
T smart00034       70 ------------DSNGSWQWSDGSGPVNY--SNWAPGEPNGGSGDCVVLSTSGG-GKWNDVSCT--SKLPFVCE  126 (126)
T ss_pred             ------------CcCCCeEECCCCCCCCc--cccCCCCCCCCCCCCEEEecCCC-CcccCCCCC--CCcccccC
Confidence                        1467899999998 444  78988433334689999977653 469999999  99999997

Many of these domains function as calcium-dependent carbohydrate binding modules.

>PF00075 RNase_H: RNase H; InterPro: IPR002156 The RNase H domain is responsible for hydrolysis of the RNA portion of RNA x DNA hybrids, and this activity requires the presence of divalent cations (Mg2+ or Mn2+) that bind its active site

Probab=99.83  E-value=8.2e-21  Score=164.45  Aligned_cols=114  Identities=29%  Similarity=0.469  Sum_probs=87.0

Q ss_pred             ceEe-eCCCCC--CCceEEEEEeCCC-EEEeCCCCCcchHHHHHHHHHHHHHhHhcCCceEEEEeccHHHHHhhcc----
Q psy14885        221 DVVF-DLSKRN--SNTGFAFIINNEN-FQYRLPHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGIDN----  292 (483)
Q Consensus       221 ~~~~-DgS~~~--~~~G~g~~~~~~~-~~~~l~~~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs~~~~~~l~~----  292 (483)
                      .++| |||...  +..|+|+++..+. ....++ ..|+++|||.||..||+ +.  ....++|+|||+++++.|..    
T Consensus         4 ~~iytDgS~~~~~~~~~~g~v~~~~~~~~~~~~-~~s~~~aEl~Ai~~AL~-~~--~~~~v~I~tDS~~v~~~l~~~~~~   79 (132)
T PF00075_consen    4 IIIYTDGSCRPNPGKGGAGYVVWGGRNFSFRLG-GQSNNRAELQAIIEALK-AL--EHRKVTIYTDSQYVLNALNKWLHG   79 (132)
T ss_dssp             EEEEEEEEECTTTTEEEEEEEEETTEEEEEEEE-SECHHHHHHHHHHHHHH-TH--STSEEEEEES-HHHHHHHHTHHHH
T ss_pred             EEEEEeCCccCCCCceEEEEEEECCeEEEeccc-ccchhhhheehHHHHHH-Hh--hcccccccccHHHHHHHHHHhccc
Confidence            4566 999764  7778888775442 123334 88999999999999999 54  34999999999999998877    


Q ss_pred             -cCCcc----hHHHHHHHHHHHHhhCCCceEEEEeccCCCC-cchHHHhHHHHhhh
Q psy14885        293 -IQQRN----NIIQLIKQEYYFASTNGSQISFMWIPSHSNI-ALNDKADQLAKNSI  342 (483)
Q Consensus       293 -~~~~~----~~~~~i~~~~~~~~~~~~~v~~~WvpgH~g~-~gNe~AD~lAk~a~  342 (483)
                       .+...    ++...|.+.+    ..+..|.|+|||||+|+ .||+.||+|||+|+
T Consensus        80 ~~~~~~~~~~~i~~~i~~~~----~~~~~v~~~~V~~H~~~~~~N~~aD~lAk~a~  131 (132)
T PF00075_consen   80 NGWKKTSNGRPIKNEIWELL----SRGIKVRFRWVPGHSGVPQGNERADRLAKEAA  131 (132)
T ss_dssp             TTSBSCTSSSBHTHHHHHHH----HHSSEEEEEESSSSSSSHHHHHHHHHHHHHHH
T ss_pred             cccccccccccchhheeecc----ccceEEeeeeccCcCCCchhHHHHHHHHHHhc
Confidence             33322    3445444433    55889999999999999 79999999999986

This domain is a part of a large family of homologous RNase H enzymes of which the RNase HI protein from Escherichia coli is the best characterised []. Secondary structure predictions for the enzymes from E. coli, yeast, human liver and diverse retroviruses (such as Rous sarcoma virus and the Foamy viruses) supported, in every case, the five beta-strands (1 to 5) and four or five alpha-helices (A, B/C, D, E) that have been identified by crystallography in the RNase H domain of Human immunodeficiency virus 1 (HIV-1) reverse transcriptase and in E. coli RNase H []. Reverse transcriptase (RT) is a modular enzyme carrying polymerase and ribonuclease H (RNase H) activities in separable domains. Reverse transcriptase (RT) converts the single-stranded RNA genome of a retrovirus into a double-stranded DNA copy for integration into the host genome. This process requires ribonuclease H as well as RNA- and DNA-directed DNA polymerase activities. Retroviral RNase H is synthesised as part of the POL polyprotein that contains; an aspartyl protease, a reverse transcriptase, RNase H and integrase. POL polyprotein undergoes specific enzymatic cleavage to yield the mature proteins. Bacterial RNase H 3.1.26.4 from EC catalyses endonucleolytic cleavage to 5'-phosphomonoester acting on RNA-DNA hybrids. The 3D structure of the RNase H domain from diverse bacteria and retroviruses has been solved [, , ]. All have four beta strands and four to five alpha helices. The E. coli RNase H1 protein binds a single Mg2+ ion cofactor in the active site of the enzyme. The divalent cation is bound by the carboxyl groups of four acidic residues, Asp-10, Glu-48, Asp-70, and Asp-134 []. The first three acidic residues are highly conserved in all bacterial and retroviral RNase H sequences. ; GO: 0003676 nucleic acid binding, 0004523 ribonuclease H activity; PDB: 3LP3_B 2KW4_A 3P1G_A 1RIL_A 2RPI_A 4EQJ_G 4EP2_B 3OTY_P 3U3G_D 2ZQB_D ....

>cd03592 CLECT_selectins_like C-type lectin-like domain (CTLD) of the type found in the type 1 transmembrane proteins: P(platlet)-, E(endothelial)-, and L(leukocyte)- selectins (sels)

Probab=99.83  E-value=2.8e-20  Score=157.17  Aligned_cols=112  Identities=21%  Similarity=0.409  Sum_probs=92.5

Q ss_pred             EEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccCcccccccccCCcC
Q psy14885         41 YRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQ  120 (483)
Q Consensus        41 y~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~~~~~~~w~~~g~~  120 (483)
                      |+++... ++|.+|+.+|+.+||+||+|+|++|++||..++....  ...||||+++..                     
T Consensus         3 Y~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~i~~~~~~~~--~~~~WiG~~~~~---------------------   58 (115)
T cd03592           3 YHYSTEK-MTFNEAVKYCKSRGTDLVAIQNAEENALLNGFALKYN--LGYYWIDGNDIN---------------------   58 (115)
T ss_pred             EEEcCCc-cCHHHHHHHHHHcCCeEeecCCHHHHHHHHHHHHhcC--CCCEEEeCccCC---------------------
Confidence            8899995 9999999999999999999999999999999875432  235666665432                     


Q ss_pred             CCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885        121 QSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA  182 (483)
Q Consensus       121 ~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~  182 (483)
                       ..+.|.|.||+++.+  .+|++ +|++..+++|+.+..... +.|+|.+|+  ..++||||+
T Consensus        59 -~~~~W~~~dg~~~~y--~~W~~geP~~~~~~~Cv~~~~~~~-g~W~d~~C~--~~~~fICe~  115 (115)
T cd03592          59 -NEGTWVDTDKKELEY--KNWAPGEPNNGRNENCLEIYIKDN-GKWNDEPCS--KKKSAICYT  115 (115)
T ss_pred             -ccCeEEeCCCCcccc--cccCCCCCCCCCCCCceEEccCCC-CCCcCcCCC--CCccceeCC
Confidence             467899999998765  88999 999866789999976422 469999999  999999996

CLECT_selectins_like: C-type lectin-like domain (CTLD) of the type found in the type 1 transmembrane proteins: P(platlet)-, E(endothelial)-, and L(leukocyte)- selectins (sels). CTLD refers to a domain homologous to the carbohydrate-recognition domains (CRDs) of the C-type lectins. P- E- and L-sels are cell adhesion receptors that mediate the initial attachment, tethering, and rolling of lymphocytes on inflamed vascular walls enabling subsequent lymphocyte adhesion and transmigration. L- sel is expressed constitutively on most leukocytes. P-sel is stored in the Weibel-Palade bodies of endothelial cells and in the alpha granules of platlets. E- sels are present on endothelial cells. Following platelet and/or endothelial cell activation P- sel is rapidly translocated to the cell surface and E-sel exp

>cd03601 CLECT_TC14_like C-type lectin-like domain (CTLD) of the type found in lectins TC14, TC14-2, TC14-3, and TC14-4 from the budding tunicate Polyandrocarpa misakiensis and PfG6 from the Acorn worm

Probab=99.82  E-value=6.5e-20  Score=155.89  Aligned_cols=113  Identities=16%  Similarity=0.169  Sum_probs=84.7

Q ss_pred             EEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccCcccccccccCCcC
Q psy14885         41 YRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQ  120 (483)
Q Consensus        41 y~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~~~~~~~w~~~g~~  120 (483)
                      |+|+... ++|.+|+..|+.+||+||+|+|.+| .++..+..........||||++           |           .
T Consensus         3 ~~~~~~~-~~w~~A~~~C~~~G~~La~i~s~~e-~~~~~i~~~~~~~~~~~WIGl~-----------d-----------~   58 (119)
T cd03601           3 ILCSDET-MNYAKAGAFCRSRGMRLASLAMRDS-EMRDAILAFTLVKGHGYWVGAD-----------N-----------L   58 (119)
T ss_pred             EEEcCCc-CCHHHHHHHHHhcCCEEeeecCHHH-HHHHHHHhccccCCccEEEEec-----------c-----------C
Confidence            7788884 9999999999999999999999988 3333332211112233455544           4           2


Q ss_pred             -CCCCccccCCCCccc-cccccCCC-CCCCcc-cCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885        121 -QSPNLWVNEDGTNLN-ELDAAFLP-EPADNV-QRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA  182 (483)
Q Consensus       121 -~~~~~~~W~dg~~~~-~~~~~w~~-~P~~~~-~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~  182 (483)
                       ..++.|+|+||+++. .| .+|++ +|++.+ .++||.+....  +.|+|.+|.  ..++|||||
T Consensus        59 ~~~~g~~~W~dG~~~~~~y-~~W~~geP~~~~~~e~Cv~~~~~~--~~W~d~~C~--~~~~fICek  119 (119)
T cd03601          59 QDGEYDFLWNDGVSLPTDS-DLWAPNEPSNPQSRQLCVQLWSKY--NLLDDEYCG--RAKRVICEK  119 (119)
T ss_pred             CCCCCCeEeCCCCCcCCCC-CccCCCcCcCcCCCcCCeEEeCCC--CCEeCccCC--CCceeeecC
Confidence             357889999999884 23 89999 998754 58999986543  369999999  999999996

CLECT_TC14_like: C-type lectin-like domain (CTLD) of the type found in lectins TC14, TC14-2, TC14-3, and TC14-4 from the budding tunicate Polyandrocarpa misakiensis and PfG6 from the Acorn worm. CTLD refers to a domain homologous to the carbohydrate-recognition domains (CRDs) of the C-type lectins. TC14 is homodimeric. The CTLD of TC14 binds D-galactose and D-fucose. TC14 is expressed constitutively by multipotent epithelial and mesenchymal cells and plays in role during budding, in inducing the aggregation of undifferentiated mesenchymal cells to give rise to epithelial forming tissue. TC14-2 and TC14-3 shows calcium-dependent galactose binding activity. TC14-3 is a cytostatic factor which blocks cell growth and dedifferentiation of the atrial epithelium during asexual reproducti

>TIGR00864 PCC polycystin cation channel protein

Probab=99.80  E-value=1.2e-19  Score=210.20  Aligned_cols=150  Identities=15%  Similarity=0.229  Sum_probs=119.3

Q ss_pred             cCCCccccccc--CCeEEEEecCCCCCHHHHHHHhhhc-CCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCc
Q psy14885         26 ELRCPQHWVQY--RDSCYRFVKSPLKTRNDAKLNCKSL-DSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNL  102 (483)
Q Consensus        26 ~~~C~~gw~~~--~~~Cy~~~~~~~~tw~~A~~~C~~~-g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~  102 (483)
                      ...||+||..|  +++||+++... ++|.+|+..|+++ ||+|++|+|.+|++||..++.+..  ...+|||+++..   
T Consensus       315 ~~~CP~GW~~f~~~g~CYk~~~e~-~TW~dAe~~C~s~GGAhLAsI~S~eEn~FL~~lv~~s~--~~~vWIGLsD~~---  388 (2740)
T TIGR00864       315 HPHCPKDGEIFEENGHCFQIVPEE-AAWLDAQEQCLARAGAALAIVDNDALQNFLARKVTHSL--DRGVWIGFSDVN---  388 (2740)
T ss_pred             CCCCCCCCeecCCCCEEEEEeCCc-cCHHHHHHHhhccCCeEEecCCCHHHHHHHHHHhhccC--CccEEEeeeCCC---
Confidence            36799999755  79999999995 9999999999999 599999999999999999886432  223555554322   


Q ss_pred             ccccCcccccccccCCcCCCCC--ccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeee
Q psy14885        103 WVNEDDPQRRKWYFGGTQQSPN--LWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFI  179 (483)
Q Consensus       103 Wig~~~~~~~~w~~~g~~~~~~--~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fv  179 (483)
                                         .++  .|+|+||+++..| .+|.+ ||++..+++|+.+...   ..|+|.+|+  ..++||
T Consensus       389 -------------------~EG~g~WvWsDGS~l~~Y-tnW~pGEPNn~~~EdCV~l~~~---g~WND~~Cs--~~~~FI  443 (2740)
T TIGR00864       389 -------------------GAEKGPAHQGEAFEAEEC-EEGLAGEPHPARAEHCVRLDPR---GQCNSDLCN--APHAYV  443 (2740)
T ss_pred             -------------------CCCceeeEECCCCcccCc-cCcCCCCCCCCCCCCCEEEcCC---CCEEccCCC--CCeeEE
Confidence                               334  4999999998544 89999 9998777999998543   359999999  999999


Q ss_pred             eecchhhhhhhccccccccccccccCCCCC
Q psy14885        180 CEASIQKLHYLLNDDRTYQYGMDIENPDKI  209 (483)
Q Consensus       180 Ce~~~~~~~~~~~~~~~~~yg~~~~~~~~~  209 (483)
                      ||+++   ..++.+..-|.+|+.+-++...
T Consensus       444 CE~~~---~~~v~d~~~~~~g~~~~~~~~~  470 (2740)
T TIGR00864       444 CELNP---GGPVPDAENFAMGAASFDLHGL  470 (2740)
T ss_pred             eEECC---CCcccccceEEeecccCCcccc
Confidence            99974   3667777888888877655444

Note: this model has been restricted to the amino half because for technical reasons.

>cd03603 CLECT_VCBS A bacterial subgroup of the C-type lectin-like (CTLD) domain; a subgroup of bacterial protein domains homologous to the carbohydrate-recognition domains (CRDs) of the C-type lectins

Probab=99.80  E-value=2.3e-19  Score=152.22  Aligned_cols=113  Identities=20%  Similarity=0.342  Sum_probs=91.1

Q ss_pred             eEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccCcccccccccCC
Q psy14885         39 SCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGG  118 (483)
Q Consensus        39 ~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~~~~~~~w~~~g  118 (483)
                      +||+++..+ ++|.+|+..|+++||+||+|+|++|++||..++.    ....+|||+++..                   
T Consensus         1 ~~Y~~~~~~-~sw~~A~~~C~~~g~~La~I~s~~E~~fv~~~~~----~~~~~WiG~~~~~-------------------   56 (118)
T cd03603           1 HFYKFVDGG-MTWEAAQTLAESLGGHLVTINSAEENDWLLSNFG----GYGASWIGASDAA-------------------   56 (118)
T ss_pred             CeEEEeCCC-cCHHHHHHHHHHcCCEEcccCCHHHHHHHHHHhc----cCCCEEEeeecCC-------------------
Confidence            599999995 9999999999999999999999999999999885    2335566665432                   


Q ss_pred             cCCCCCccccCCCCccccccccCCC-CC-CCc-ccCCeEEEecc-cccccccccccCCCCceeeeee
Q psy14885        119 TQQSPNLWVNEDGTNLNELDAAFLP-EP-ADN-VQRDYLAYSFS-QSLKRWGFERVTGMEPLLFICE  181 (483)
Q Consensus       119 ~~~~~~~~~W~dg~~~~~~~~~w~~-~P-~~~-~~~~Cv~~~~~-~~~~~W~~~~C~~~~~~~fvCe  181 (483)
                         .++.|.|+||+++.+  .+|.+ +| ++. +.++|+.+... ...+.|+|.+|+ ..+.+||||
T Consensus        57 ---~~~~w~W~dg~~~~~--~~W~~~eP~~~~~~~~~Cv~~~~~~~~~~~W~d~~C~-~~~~~~iCe  117 (118)
T cd03603          57 ---TEGTWKWSDGEESTY--TNWGSGEPHNNGGGNEDYAAINHFPGISGKWNDLANS-YNTLGYVIE  117 (118)
T ss_pred             ---CCCceEeCCCCcCCC--CCcCCCCCCCCCCCCcCeEEeecCCCCCCcCccCCCC-ccccceEEe
Confidence               578899999999876  78999 99 553 35899998652 012359999997 458899998

CLECT_VCBS: A bacterial subgroup of the C-type lectin-like (CTLD) domain; a subgroup of bacterial protein domains homologous to the carbohydrate-recognition domains (CRDs) of the C-type lectins. Many CTLDs are calcium-dependent carbohydrate binding modules; other CTLDs bind protein ligands, lipids, and inorganic surfaces including CaCO3 and ice. Bacterial CTLDs within this group are functionally uncharacterized. Animal C-type lectins are involved in such functions as extracellular matrix organization, endocytosis, complement activation, pathogen recognition, and cell-cell interactions. CTLDs may bind a variety of carbohydrate ligands including mannose, N-acetylglucosamine, galactose, N-acetylgalactosamine, and fucose. CTLDs associate with each other through several different surface

>cd03595 CLECT_chondrolectin_like C-type lectin-like domain (CTLD) of the type found in the human type-1A transmembrane proteins chondrolectin (CHODL) and layilin

Probab=99.80  E-value=2.9e-19  Score=158.02  Aligned_cols=131  Identities=15%  Similarity=0.259  Sum_probs=99.1

Q ss_pred             CcccccccCCeEEEEe-----cCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcc
Q psy14885         29 CPQHWVQYRDSCYRFV-----KSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLW  103 (483)
Q Consensus        29 C~~gw~~~~~~Cy~~~-----~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~W  103 (483)
                      |..|+   ++.||+++     .. .++|.+|+..|+.+||+|++|+|++|++||..+++........+|||+++..... 
T Consensus         4 ~~~~~---~~~Cy~~~~~~~~~~-~~tw~~A~~~C~~~g~~LasI~s~~E~~~i~~~i~~~~~~~~~~WIGl~~~~~~~-   78 (149)
T cd03595           4 CRRGT---EKPCYKIAYFQDSRR-RLNFEEARQACREDGGELLSIESENEQKLIERFIQTLRASDGDFWIGLRRSSQYN-   78 (149)
T ss_pred             eccCC---CCccEEEEEEecccc-ccCHHHHHHHHHHcCCEECccCCHHHHHHHHHHHHhhcCCCCcEEEEeECCCCcc-
Confidence            55554   47899975     56 4999999999999999999999999999999988755445567888887543100 


Q ss_pred             cccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEeccc---------ccccccccccCCC
Q psy14885        104 VNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQ---------SLKRWGFERVTGM  173 (483)
Q Consensus       104 ig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~---------~~~~W~~~~C~~~  173 (483)
                        ...           ....+.|.|+||+++.+  .+|.+ +|++ +.++|+++....         ...+|+|..|+  
T Consensus        79 --~~~-----------~~~~~~~~W~dG~~~~y--~~W~~~eP~~-~~~~Cv~l~~~~~~~~~~~~~~~~~W~d~~C~--  140 (149)
T cd03595          79 --VTS-----------SACSSLYYWLDGSISTF--RNWYVDEPSC-GSEVCVVMYHQPSAPAGQGGPYLFQWNDDNCN--  140 (149)
T ss_pred             --ccc-----------cccCCccEEcCCCccCc--cCCCCCCCCC-cccCCEEEEecCCCCcCcCcccCCCccCCCCC--
Confidence              000           00135799999999876  78999 9986 458999996421         12369999999  


Q ss_pred             Cceeeeeec
Q psy14885        174 EPLLFICEA  182 (483)
Q Consensus       174 ~~~~fvCe~  182 (483)
                      ..++||||.
T Consensus       141 ~~~~fICe~  149 (149)
T cd03595         141 MKNNFICKY  149 (149)
T ss_pred             CCcccccCC
Confidence            999999984

CLECT_chondrolectin_like: C-type lectin-like domain (CTLD) of the type found in the human type-1A transmembrane proteins chondrolectin (CHODL) and layilin. CTLD refers to a domain homologous to the carbohydrate-recognition domains (CRDs) of the C-type lectins. CHODL is predominantly expressed in muscle cells and is associated with T-cell maturation. Various alternatively spliced isoforms have been of CHODL have been identified. The transmembrane form of CHODL is localized in the ER-Golgi apparatus. Layilin is widely expressed in different cell types. The extracellular CTLD of layilin binds hyaluronan (HA), a major constituent of the extracellular matrix (ECM). The cytoplasmic tail of layilin binds various members of the band 4.1/ERM superfamily (talin, radixin, and merlin). The ERM proteins are cytoskeleton-membrane l

>cd03600 CLECT_thrombomodulin_like C-type lectin-like domain (CTLD) of the type found in human thrombomodulin(TM), Endosialin, C14orf27, and C1qR

Probab=99.79  E-value=5.4e-19  Score=154.92  Aligned_cols=129  Identities=19%  Similarity=0.239  Sum_probs=96.5

Q ss_pred             cCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCC----CCCceeeecccCC-CCcccccCccc
Q psy14885         36 YRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDP----QRRKWYFGGTQQS-PNLWVNEDDPQ  110 (483)
Q Consensus        36 ~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~----~~~~~wig~~~~~-~~~Wig~~~~~  110 (483)
                      .+++||+++... ++|.+|+.+|+.+||+||+|+|.+|+++|..++.....    ....||||+++.. ...+.      
T Consensus         2 ~~~~Cy~~~~~~-~sw~~A~~~C~~~gg~La~i~s~~E~~~v~~~l~~~~~~~~~~~~~~WIGl~~~~~~~~~~------   74 (141)
T cd03600           2 VSDACYTLHPQK-LTFLEAQRSCIELGGNLATVRSGEEADVVSLLLAAGPGRHGRGSLRLWIGLQREPRQCSDP------   74 (141)
T ss_pred             CCCceEEEeCCc-cCHHHHHHHHHhhCCEeeecCCHHHHHHHHHHHhhccccccCCCccEEEeEecCcccCccc------
Confidence            357899999995 99999999999999999999999999999999876521    2456777776522 11111      


Q ss_pred             ccccccCCcCCCCCccccCCCCccccccccCCCCCCCc-ccCCeEEEecccc---cccccccccCCCCc-eeeeeecc
Q psy14885        111 RRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADN-VQRDYLAYSFSQS---LKRWGFERVTGMEP-LLFICEAS  183 (483)
Q Consensus       111 ~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~-~~~~Cv~~~~~~~---~~~W~~~~C~~~~~-~~fvCe~~  183 (483)
                               ....+.|.|+||.....| ++|.+.|++. ..++||++....+   ...|+|.+|+  .. .+||||..
T Consensus        75 ---------~~~~~~f~W~d~~~~~~y-~~W~~~p~n~~~~~~Cv~l~~~~~~~~~~~W~d~~C~--~~~~~fIC~~~  140 (141)
T cd03600          75 ---------SLPLRGFSWVTGDQDTDF-SNWLQEPAGTCTSPRCVALSAAGSTPDNLKWKDGPCS--ARADGYLCKFS  140 (141)
T ss_pred             ---------cccCCccEECCCCCCCCc-cccccCCCCCCCCCccEEEEccCCCCCCCccccCCcC--CCCCCeEEeee
Confidence                     113467999998654333 8899955443 4689999977542   3479999999  77 48999964

CLECT_thrombomodulin_like: C-type lectin-like domain (CTLD) of the type found in human thrombomodulin(TM), Endosialin, C14orf27, and C1qR. CTLD refers to a domain homologous to the carbohydrate-recognition domains (CRDs) of the C-type lectins. In these thrombomodulin-like proteins the residues involved in coordinating Ca2+ in the classical MBP-A CTLD are not conserved. TM exerts anti-fibrinolytic and anti-inflammatory activity. TM also regulates blood coagulation in the anticoagulant protein C pathway. In this pathway, the procoagulant properties of thrombin (T) are lost when it binds TM. TM also plays a key role in tumor biology. It is expressed on endothelial cells and on several type of tumor cell including squamous cell carcinoma. Loss of TM expression correlates with advanced stage and poor prognosis. Loss of function of TM func

>cd03602 CLECT_1 C-type lectin (CTL)/C-type lectin-like (CTLD) domain subgroup 1; a subgroup of protein domains homologous to the carbohydrate-recognition domains (CRDs) of the C-type lectins

Probab=99.78  E-value=5.5e-19  Score=147.53  Aligned_cols=106  Identities=21%  Similarity=0.307  Sum_probs=88.4

Q ss_pred             EEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccCcccccccccCCc
Q psy14885         40 CYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGT  119 (483)
Q Consensus        40 Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~~~~~~~w~~~g~  119 (483)
                      ||+++..+ ++|.+|+..|+.+||+|++|+|.+|++||..++.   .....||||++           +           
T Consensus         2 ~y~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~---~~~~~~WiGl~-----------~-----------   55 (108)
T cd03602           2 TFYLVNES-KTWSEAQQYCRENYTDLATVQNQEDNALLSNLSR---VSNSAAWIGLY-----------R-----------   55 (108)
T ss_pred             ceEEeccc-cCHHHHHHHHHHHCCccCeecCHHHHHHHHHHHh---ccCCcEEEEEE-----------C-----------
Confidence            79999995 9999999999999999999999999999999885   12344555555           3           


Q ss_pred             CCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885        120 QQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA  182 (483)
Q Consensus       120 ~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~  182 (483)
                        ..+.|.|+||++..+  .+|.+ +|.+  +++|+.+...   +.|.+.+|.  ..++||||+
T Consensus        56 --~~~~~~W~dg~~~~~--~~w~~~~~~~--~~~C~~~~~~---~~w~~~~C~--~~~~fIC~~  108 (108)
T cd03602          56 --DVDSWRWSDGSESSF--RNWNTFQPFG--QGDCATMYSS---GRWYAALCS--ALKPFICYD  108 (108)
T ss_pred             --CCCceEEcCCCCCcc--CccCCCCCCC--CCCeeEECcC---CeECcccCC--CCcCEeccC
Confidence              156799999999765  88999 8754  5899999754   369999999  999999996

CLECT_1: C-type lectin (CTL)/C-type lectin-like (CTLD) domain subgroup 1; a subgroup of protein domains homologous to the carbohydrate-recognition domains (CRDs) of the C-type lectins. Many CTLDs are calcium-dependent carbohydrate binding modules; other CTLDs bind protein ligands, lipids, and inorganic surfaces including CaCO3 and ice. Animal C-type lectins are involved in such functions as extracellular matrix organization, endocytosis, complement activation, pathogen recognition, and cell-cell interactions. CTLDs may bind a variety of carbohydrate ligands including mannose, N-acetylglucosamine, galactose, N-acetylgalactosamine, and fucose. CTLDs associate with each other through several different surfaces to form dimers, trimers, or tetramers from which ligand-binding sites project in differe

>PHA02867 C-type lectin protein; Provisional

Probab=99.75  E-value=3.7e-18  Score=150.17  Aligned_cols=112  Identities=19%  Similarity=0.257  Sum_probs=87.3

Q ss_pred             cCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885         26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN  105 (483)
Q Consensus        26 ~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig  105 (483)
                      +.+||+||..|+++||+++.. .++|.+|+..|+++||+|+.|+|++|++|+..+..      ..||||+++..      
T Consensus        46 ~~~CP~gWi~~~~~CY~fs~~-~~tW~~A~~~C~~~ga~La~I~s~eE~~Fl~~~~~------~~~WIGLs~~~------  112 (167)
T PHA02867         46 SKVCPDEWIGYNSKCYYFTIN-ETNWNDSKKLCDVMDSSLIRFDNIETLNFVSRYGK------GSYWIDINQNR------  112 (167)
T ss_pred             CCCCCCCCEEECCEEEEEecc-ccCHHHHHHHHhhCCCEECCcCCHHHHHHHHHcCC------CCEEEEEEeCC------
Confidence            678999999999999999999 59999999999999999999999999999987531      35777776543      


Q ss_pred             cCcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeecchh
Q psy14885        106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASIQ  185 (483)
Q Consensus       106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~~~  185 (483)
                                         .+.|.+++.+       ..   ..++++|+.+...    .+.+..|.  ....+||+|+..
T Consensus       113 -------------------~~~~~~~s~~-------~~---~~~~~~Ca~i~~~----~i~s~~C~--~~~~wIC~K~~~  157 (167)
T PHA02867        113 -------------------KIPGINFSLY-------YE---QGVNDICLLFDTS----NIIEMSCI--FHERTICVKEDR  157 (167)
T ss_pred             -------------------CCCCccCcee-------ee---cCCCCcEEEEeCC----eEEeeccc--CCcEEEEEccCc
Confidence                               1122333222       11   1235799998653    48999999  999999999843

>PRK13907 rnhA ribonuclease H; Provisional

Probab=99.73  E-value=3.7e-17  Score=140.78  Aligned_cols=118  Identities=20%  Similarity=0.242  Sum_probs=97.8

Q ss_pred             Ee-eCCCCC--CCceEEEEEeCCCEE--EeC-CCCCcchHHHHHHHHHHHHHhHhcCCceEEEEeccHHHHHhhcccCCc
Q psy14885        223 VF-DLSKRN--SNTGFAFIINNENFQ--YRL-PHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGIDNIQQR  296 (483)
Q Consensus       223 ~~-DgS~~~--~~~G~g~~~~~~~~~--~~l-~~~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs~~~~~~l~~~~~~  296 (483)
                      +| |||...  ++.|+|+++.+....  ... ....||++||+.|++.||+.+.+.+..++.|+|||+.+++.+++.+..
T Consensus         4 iy~DGa~~~~~g~~G~G~vi~~~~~~~~~~~~~~~~tn~~AE~~All~aL~~a~~~g~~~v~i~sDS~~vi~~~~~~~~~   83 (128)
T PRK13907          4 VYIDGASKGNPGPSGAGVFIKGVQPAVQLSLPLGTMSNHEAEYHALLAALKYCTEHNYNIVSFRTDSQLVERAVEKEYAK   83 (128)
T ss_pred             EEEeeCCCCCCCccEEEEEEEECCeeEEEEecccccCCcHHHHHHHHHHHHHHHhCCCCEEEEEechHHHHHHHhHHHhc
Confidence            45 999976  899999999765443  222 356899999999999999999988888999999999999999987665


Q ss_pred             chHHHHHHHHHHHHhhCCCceEEEEeccCCCCcchHHHhHHHHhhhcC
Q psy14885        297 NNIIQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAKNSINS  344 (483)
Q Consensus       297 ~~~~~~i~~~~~~~~~~~~~v~~~WvpgH~g~~gNe~AD~lAk~a~~~  344 (483)
                      +.-...+.+.+..+..+...+.|.|||+    +.|+.||.||+.|+..
T Consensus        84 ~~~~~~l~~~~~~l~~~f~~~~~~~v~r----~~N~~Ad~LA~~a~~~  127 (128)
T PRK13907         84 NKMFAPLLEEALQYIKSFDLFFIKWIPS----SQNKVADELARKAILQ  127 (128)
T ss_pred             ChhHHHHHHHHHHHHhcCCceEEEEcCc----hhchhHHHHHHHHHhc
Confidence            5555666666777778888999999996    4999999999998753

>cd06222 RnaseH RNase H (RNase HI) is an endonuclease that cleaves the RNA strand of an RNA/DNA hybrid in a not sequence-specific manner

Probab=99.73  E-value=9.4e-17  Score=136.73  Aligned_cols=120  Identities=22%  Similarity=0.284  Sum_probs=97.2

Q ss_pred             Ee-eCCCCC--CCceEEEEEeCCCE--EEeC---CCCCcchHHHHHHHHHHHHHhHhcCCceEEEEeccHHHHHhhcccC
Q psy14885        223 VF-DLSKRN--SNTGFAFIINNENF--QYRL---PHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGIDNIQ  294 (483)
Q Consensus       223 ~~-DgS~~~--~~~G~g~~~~~~~~--~~~l---~~~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs~~~~~~l~~~~  294 (483)
                      +| |||...  +.+|+|+++.+...  .+..   ....++++||+.|+..||+.+......++.|++||+.++..+.+..
T Consensus         2 ~~~Dgs~~~~~~~~g~g~v~~~~~~~~~~~~~~~~~~~s~~~aEl~al~~al~~~~~~~~~~i~i~~Ds~~~~~~~~~~~   81 (130)
T cd06222           2 IYTDGSCRGNPGPAGAGVVLRDPGGEVLLSGGLLGGNTTNNRAELLALIEALELALELGGKKVNIYTDSQYVINALTGWY   81 (130)
T ss_pred             EEecccCCCCCCceEEEEEEEeCCCeEEEeccccCCCCcHHHHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHhhccc
Confidence            45 999977  58899999976443  2211   2578999999999999999998888999999999999999999865


Q ss_pred             C-cchHHHHHHHHHHHHhhCCCceEEEEeccCCCCcchHHHhHHHHhhh
Q psy14885        295 Q-RNNIIQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAKNSI  342 (483)
Q Consensus       295 ~-~~~~~~~i~~~~~~~~~~~~~v~~~WvpgH~g~~gNe~AD~lAk~a~  342 (483)
                      . .......+...+..+...+..++|.|||+|+++.+|+.||.|||+|.
T Consensus        82 ~~~~~~~~~~~~~i~~~~~~~~~~~i~~v~~h~~~~~n~~ad~la~~~~  130 (130)
T cd06222          82 EGKPVKNVDLWQRLLALLKRFHKVRFEWVPGHSGIEGNERADALAKEAA  130 (130)
T ss_pred             cCCChhhHHHHHHHHHHHhCCCeEEEEEcCCCCCCcchHHHHHHHHhhC
Confidence            4 23334444555555556789999999999999999999999999874

One of the important functions of RNase H is to remove Okazaki fragments during DNA replication. RNase H knockout mice lack mitochondrial DNA replication and die as embryos. The retroviral reverse transcriptase contains an RNase H domain that plays an important role in converting a single stranded retroviral genomic RNA into a dsDNA for integration into host chromosomes. RNase H inhibitors have been explored as an anti-HIV drug target because RNase H inactivation inhibits reverse transcription.

>KOG3752|consensus

Probab=99.68  E-value=2.4e-16  Score=152.23  Aligned_cols=123  Identities=24%  Similarity=0.239  Sum_probs=95.9

Q ss_pred             ceEe-eCCCCC-----CCceEEEEEeCC---CEEEeCC-CCCcchHHHHHHHHHHHHHhHhcCCceEEEEeccHHHHHhh
Q psy14885        221 DVVF-DLSKRN-----SNTGFAFIINNE---NFQYRLP-HEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGI  290 (483)
Q Consensus       221 ~~~~-DgS~~~-----~~~G~g~~~~~~---~~~~~l~-~~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs~~~~~~l  290 (483)
                      .++| |||+..     ..+|+||+..++   +....+. +..|||+|||.||..||+.+.+....+++|.|||++++++|
T Consensus       213 ~vvytDGS~~~ng~~~~~AGyGvywg~~~e~N~s~pv~~g~qtNnrAEl~Av~~ALkka~~~~~~kv~I~TDS~~~i~~l  292 (371)
T KOG3752|consen  213 QVVYTDGSSSGNGRKSSRAGYGVYWGPGHELNVSGPLAGGRQTNNRAELIAAIEALKKARSKNINKVVIRTDSEYFINSL  292 (371)
T ss_pred             eEEEecCccccCCCCCCcceeEEeeCCCCcccccccCCCCcccccHHHHHHHHHHHHHHHhcCCCcEEEEechHHHHHHH
Confidence            6677 999876     578999999764   4466675 88999999999999999999998888999999999999999


Q ss_pred             cc--------cCC---cch------HHHHHHHHHHHHhh--CCCceEEEEeccCCCCcchHHHhHHHHhhhc
Q psy14885        291 DN--------IQQ---RNN------IIQLIKQEYYFAST--NGSQISFMWIPSHSNIALNDKADQLAKNSIN  343 (483)
Q Consensus       291 ~~--------~~~---~~~------~~~~i~~~~~~~~~--~~~~v~~~WvpgH~g~~gNe~AD~lAk~a~~  343 (483)
                      +.        ++.   .++      ........+..|.+  ++.+|++.|||||.|+.|||.||.||++...
T Consensus       293 ~~wv~~~k~~~~k~~~~~~~i~~~v~n~~~~~e~~~l~q~~~~~~vq~~~V~Gh~gi~gne~Ad~lARkgs~  364 (371)
T KOG3752|consen  293 TLWVQGWKKNGWKTSNGSDRICAYVKNQDFFNELDELEQEISNKKVQQEYVGGHSGILGNEMADALARKGST  364 (371)
T ss_pred             HHHHhhhccCccccccCCCccceeeecchHHHHHHHHHhhhccCceEEEEecCcCCcchHHHHHHHHhhhhh
Confidence            74        111   111      01112223333333  4689999999999999999999999998743

>cd00037 CLECT C-type lectin (CTL)/C-type lectin-like (CTLD) domain

Probab=99.61  E-value=3.1e-15  Score=124.92  Aligned_cols=114  Identities=28%  Similarity=0.488  Sum_probs=92.8

Q ss_pred             eEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccCcccccccccCC
Q psy14885         39 SCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGG  118 (483)
Q Consensus        39 ~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~~~~~~~w~~~g  118 (483)
                      .||+++... ++|.+|+..|+.+||+|++|++.+|++||..++..  .....||+|+.+..                   
T Consensus         1 ~Cy~~~~~~-~~~~~A~~~C~~~~~~L~~~~~~~e~~~i~~~~~~--~~~~~~wvg~~~~~-------------------   58 (116)
T cd00037           1 SCYKFSTEK-LTWEEAQEYCRSLGGHLASIHSEEENDFLASLLKK--SSSSDVWIGLNDLS-------------------   58 (116)
T ss_pred             CCEEEcCCc-cCHHHHHHHHHHcCCEEcccCCHHHHHHHHHHHhC--CCCCCEEEcccccC-------------------
Confidence            499999994 99999999999999999999999999999999865  24455666665432                   


Q ss_pred             cCCCCCccccCCCCc-cccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885        119 TQQSPNLWVNEDGTN-LNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA  182 (483)
Q Consensus       119 ~~~~~~~~~W~dg~~-~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~  182 (483)
                         ....|.|.||+. ..+  .+|.+ +|.....++|+.+.... ...|.+.+|.  ...+||||+
T Consensus        59 ---~~~~~~~~~~~~~~~~--~~w~~~~~~~~~~~~C~~~~~~~-~~~~~~~~C~--~~~~~iC~~  116 (116)
T cd00037          59 ---SEGTWKWSDGSPLVDY--TNWAPGEPNPGGSEDCVVLSSSS-DGKWNDVSCS--SKLPFICEK  116 (116)
T ss_pred             ---cCCCeEecCCCccccc--cCCCCCCcCCCCCCCeeEEccCC-CCCccCCCCC--CCceeeecC
Confidence               367899999998 433  77988 77444578999997654 2469999999  999999985

CLECT: C-type lectin (CTL)/C-type lectin-like (CTLD) domain; protein domains homologous to the carbohydrate-recognition domains (CRDs) of the C-type lectins. This group is chiefly comprised of eukaryotic CTLDs, but contains some, as yet functionally uncharacterized, bacterial CTLDs. Many CTLDs are calcium-dependent carbohydrate binding modules; other CTLDs bind protein ligands, lipids, and inorganic surfaces, including CaCO3 and ice. Animal C-type lectins are involved in such functions as extracellular matrix organization, endocytosis, complement activation, pathogen recognition, and cell-cell interactions. For example: mannose-binding lectin and lung surfactant proteins A and D bind carbohydrates on surfaces (e.g. pathogens, allergens, necrotic, and apoptotic cells) and mediate functions associated with killing and phagocytosis; P (platlet)-, E (endothelial)-, and L (leukocyte)- selectins (sels) mediate the initia

>PRK07708 hypothetical protein; Validated

Probab=99.60  E-value=1.8e-14  Score=134.17  Aligned_cols=122  Identities=18%  Similarity=0.214  Sum_probs=94.0

Q ss_pred             ceEe-eCCCCC--CCceEEEEEeC--CCEEE------eCCCCCcchHHHHHHHHHHHHHhHhcCCce--EEEEeccHHHH
Q psy14885        221 DVVF-DLSKRN--SNTGFAFIINN--ENFQY------RLPHEASIFTAEAIAIFYCIKKISDMKIKK--AIIFSDNKSVL  287 (483)
Q Consensus       221 ~~~~-DgS~~~--~~~G~g~~~~~--~~~~~------~l~~~~s~~~AEl~ai~~Al~~~~~~~~~~--~~I~tDs~~~~  287 (483)
                      .++| |||..+  +.+|+|+++..  +...+      .+...+||++||+.|++.||+.+.+.+.+.  |.|++||+.++
T Consensus        74 ~~vY~DGs~~~n~g~aG~GvVI~~~~g~~~~~~~~~~~l~~~~TNN~AEy~Ali~aL~~A~e~g~~~~~V~I~~DSqlVi  153 (219)
T PRK07708         74 ILVYFDGGFDKETKLAGLGIVIYYKQGNKRYRIRRNAYIEGIYDNNEAEYAALYYAMQELEELGVKHEPVTFRGDSQVVL  153 (219)
T ss_pred             EEEEEeeccCCCCCCcEEEEEEEECCCCEEEEEEeeccccccccCcHHHHHHHHHHHHHHHHcCCCcceEEEEeccHHHH
Confidence            4555 999864  88999999964  22332      345568999999999999999999877654  89999999999


Q ss_pred             HhhcccCCc-chHHHHHHHHHHHHhhC-CCceEEEEeccCCCCcchHHHhHHHHhhhcCCC
Q psy14885        288 NGIDNIQQR-NNIIQLIKQEYYFASTN-GSQISFMWIPSHSNIALNDKADQLAKNSINSKL  346 (483)
Q Consensus       288 ~~l~~~~~~-~~~~~~i~~~~~~~~~~-~~~v~~~WvpgH~g~~gNe~AD~lAk~a~~~~~  346 (483)
                      +.+.+.++. ++.+..+.+.+..+.++ ...+.|.|||    .+.|+.||+||+.|++...
T Consensus       154 ~qi~g~wk~~~~~l~~y~~~i~~l~~~~~l~~~~~~Vp----R~~N~~AD~LAk~Al~~~~  210 (219)
T PRK07708        154 NQLAGEWPCYDEHLNHWLDRIEQKLKQLKLTPVYEPIS----RKQNKEADQLATQALEGTV  210 (219)
T ss_pred             HHhCCCceeCChhHHHHHHHHHHHHhhCCceEEEEECC----chhhhHHHHHHHHHHhcCC
Confidence            999998763 45555555555554443 3458889998    5689999999999998543

>PF00059 Lectin_C: Lectin C-type domain; InterPro: IPR001304 Lectins occur in plants, animals, bacteria and viruses

Probab=99.52  E-value=3.7e-14  Score=116.80  Aligned_cols=101  Identities=24%  Similarity=0.383  Sum_probs=78.2

Q ss_pred             CCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccCcccccccccCCcCCCCCcccc
Q psy14885         49 KTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVN  128 (483)
Q Consensus        49 ~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~~~~~~~w~~~g~~~~~~~~~W  128 (483)
                      ++|.+|+.+|+++||+|+.|.+.+|++||..++.    ....||||+ .                      ......|.|
T Consensus         3 ~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~----~~~~~Wig~-~----------------------~~~~~~~~w   55 (105)
T PF00059_consen    3 MTWEEAQQYCQSMGAHLASINSEEENDFIQSQLK----SNESYWIGL-D----------------------SDNNGTWKW   55 (105)
T ss_dssp             EEHHHHHHHHHHTTSEEB-GSSHHHHHHHHHHHH----SSSEEEEEE-E----------------------SSSTSEEEE
T ss_pred             CCHHHHHHHHhcCCCEEeEeCCHHHhhhhhhccc----ccceeeeee-e----------------------ccccceecc
Confidence            7899999999999999999999999999999987    556777777 1                      114678899


Q ss_pred             CCCCccccc--cccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885        129 EDGTNLNEL--DAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA  182 (483)
Q Consensus       129 ~dg~~~~~~--~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~  182 (483)
                      .||......  ..+| +  .....++|+.+. ....+.|.+.+|.  ..++|||||
T Consensus        56 ~~~~~~~~~~~~~~w-~--~~~~~~~C~~~~-~~~~~~w~~~~C~--~~~~fiCek  105 (105)
T PF00059_consen   56 IDGSPNSPENFYTNW-N--PPNDSENCAYIY-YSSSGKWNDVPCS--EKYPFICEK  105 (105)
T ss_dssp             TTSSBSSSTTBSGCB-S--SGGSSEEEEEEG-CSTTTEEEEEETT--SEEEEEEEE
T ss_pred             ccCCCcccccccccc-c--cCCCCCCeEEEE-EcCCCeEEeeCCC--CCeeEEeeC
Confidence            999876542  2456 2  222358999993 2333579999999  999999996

Initially described for their carbohydrate-binding activity [], they are now recognised as a more diverse group of proteins, some of which are involved in protein-protein, protein-lipid or protein-nucleic acid interactions []. There are at least twelve structural families of lectins: C-type lectins, which are Ca+-dependent. S-type (galectins), a widespread family of glycan-binding proteins []. I-type, which have an immunoglobulin-like fold and can recognise sialic acids, other sugars and glycosaminoglycans []. P-type, which bind phosphomannosyl receptors []. Pentraxins []. (Trout) egg lectins. Calreticulin and calnexin, which act as molecular chaperones of the endoplasmic reticulum []. ERGIC-53 and VIP-36 []. Discoidins []. Eel aggutinins (fucolectins) []. Annexin lectins []. Fibrinogen-type lectins, which includes ficolins, tachylectins 5A and 5B, and Limax flavus (Spotted garden slug) agglutinin (these proteins have clear distinctions from one another, but they share a homologous fibrinogen-like domain used for carbohydrate binding). Also unclassified orphan lectins, including amphoterin, Cel-II, complement factor H, thrombospondin, sailic acid-binding lectins, adherence lectin, and cytokins (such as tumour necrosis factor and several interleukins). C-type lectins can be further divided into seven subgroups based on additional non-lectin domains and gene structure: (I) hyalectans, (II) asialoglycoprotein receptors, (III) collectins, (IV) selectins, (V) NK group transmembrane receptors, (VI) macrophage mannose receptors, and (VII) simple (single domain) lectins []. Therefore, lectins are a diverse group of proteins, both in terms of structure and activity. Carbohydrate binding ability may have evolved independently and sporadically in numerous unrelated families, where each evolved a structure that was conserved to fulfil some other activity and function. In general, animal lectins act as recognition molecules within the immune system, their functions involving defence against pathogens, cell trafficking, immune regulation and the prevention of autoimmunity [].; GO: 0005488 binding; PDB: 1T8D_A 2H2T_B 1T8C_A 2H2R_A 1TN3_A 1RJH_A 1HTN_A 3G8K_B 2E3X_B 1UMR_D ....

>PRK07238 bifunctional RNase H/acid phosphatase; Provisional

Probab=99.50  E-value=2.5e-13  Score=138.35  Aligned_cols=122  Identities=16%  Similarity=0.249  Sum_probs=99.1

Q ss_pred             cceEe-eCCCCC--CCceEEEEEeCC--C-E--EE-eCCCCCcchHHHHHHHHHHHHHhHhcCCceEEEEeccHHHHHhh
Q psy14885        220 TDVVF-DLSKRN--SNTGFAFIINNE--N-F--QY-RLPHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGI  290 (483)
Q Consensus       220 ~~~~~-DgS~~~--~~~G~g~~~~~~--~-~--~~-~l~~~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs~~~~~~l  290 (483)
                      ..++| |||..+  |.+|+|+++.+.  + .  .. .....+||+.||+.|++.||+.+.+.+.+.+.|++||+.+++.+
T Consensus         2 ~~~i~~DGa~~~n~g~aG~G~vi~~~~~~~~~~~~~~~~~~~tnn~AE~~All~gL~~a~~~g~~~v~i~~DS~lvi~~i   81 (372)
T PRK07238          2 KVVVEADGGSRGNPGPAGYGAVVWDADRGEVLAERAEAIGRATNNVAEYRGLIAGLEAAAELGATEVEVRMDSKLVVEQM   81 (372)
T ss_pred             eEEEEecCCCCCCCCceEEEEEEEeCCCCcEEEEeecccCCCCchHHHHHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHh
Confidence            34566 999987  789999999763  2 1  21 12347899999999999999999988889999999999999999


Q ss_pred             cccCC-cchHHHHHHHHHHHHhhCCCceEEEEeccCCCCcchHHHhHHHHhhhcCC
Q psy14885        291 DNIQQ-RNNIIQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAKNSINSK  345 (483)
Q Consensus       291 ~~~~~-~~~~~~~i~~~~~~~~~~~~~v~~~WvpgH~g~~gNe~AD~lAk~a~~~~  345 (483)
                      .+.+. .+.-+..+.+.+..+.++...+++.|||+    ++|+.||.||+.|+...
T Consensus        82 ~~~~~~~~~~l~~~~~~i~~l~~~f~~~~i~~v~r----~~N~~AD~LA~~a~~~~  133 (372)
T PRK07238         82 SGRWKVKHPDMKPLAAQARELASQFGRVTYTWIPR----ARNAHADRLANEAMDAA  133 (372)
T ss_pred             CCCCccCChHHHHHHHHHHHHHhcCCceEEEECCc----hhhhHHHHHHHHHHHhh
Confidence            98765 44555566666777778889999999995    69999999999997553

>PHA02911 C-type lectin-like protein; Provisional

Probab=99.38  E-value=1.9e-12  Score=114.25  Aligned_cols=108  Identities=18%  Similarity=0.190  Sum_probs=77.4

Q ss_pred             cCCCcccccccCCeEEEEecCCCCCH--HHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcc
Q psy14885         26 ELRCPQHWVQYRDSCYRFVKSPLKTR--NDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLW  103 (483)
Q Consensus        26 ~~~C~~gw~~~~~~Cy~~~~~~~~tw--~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~W  103 (483)
                      .++||.+|..|+++||+|+.. +.+|  ..|+++|..+||+|+. ++.+|++||+.+..           |..       
T Consensus       100 ~~pC~~nW~~H~nkCYlFS~~-s~sWsW~~Srr~C~~kGATLLk-~sdEELeFIqn~wk-----------Gks-------  159 (213)
T PHA02911        100 EPICSRDWINHMGICLLSLGE-EVGFRMEIAKRFCEKKDADLIG-KIDEEKKALENIWT-----------GND-------  159 (213)
T ss_pred             CCCCchhhHhhCCEEEEEecc-ccccchhHHHHHHHhcCCEecc-CcHHHHHHHHHHHh-----------ccc-------
Confidence            456889999999999999988 3555  9999999999999999 77799999997442           221       


Q ss_pred             cccCcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecc--cccccccccccCCCCceeeeee
Q psy14885        104 VNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFS--QSLKRWGFERVTGMEPLLFICE  181 (483)
Q Consensus       104 ig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~--~~~~~W~~~~C~~~~~~~fvCe  181 (483)
                                          ..|.|+||....   +..  .|    ..+|+.+...  ...+...+.+|.  ....+|||
T Consensus       160 --------------------~~~fWID~r~ng---St~--n~----s~sCA~Is~~~~~~~~~V~sesCs--~~~~wICq  208 (213)
T PHA02911        160 --------------------HSRFWIDNRAAA---STF--DP----VNECAIGTQNHIPEVPEVLKSPCD--ERHSFICI  208 (213)
T ss_pred             --------------------cceEEecCcccc---cee--cC----CCCeEEEEcccccCCCceEccccC--CCceEEEE
Confidence                                123333332100   000  11    4689999763  122357889999  99999999


Q ss_pred             cch
Q psy14885        182 ASI  184 (483)
Q Consensus       182 ~~~  184 (483)
                      |..
T Consensus       209 K~~  211 (213)
T PHA02911        209 KKD  211 (213)
T ss_pred             ecc
Confidence            973

>PF13456 RVT_3: Reverse transcriptase-like; PDB: 3ALY_A 2EHG_A 3HST_B

Probab=99.29  E-value=1.3e-11  Score=98.31  Aligned_cols=86  Identities=24%  Similarity=0.280  Sum_probs=70.3

Q ss_pred             chHHHHHHHHHHHHHhHhcCCceEEEEeccHHHHHhhcccCCcchHHHHHHHHHHHHhhCCCceEEEEeccCCCCcchHH
Q psy14885        254 IFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGIDNIQQRNNIIQLIKQEYYFASTNGSQISFMWIPSHSNIALNDK  333 (483)
Q Consensus       254 ~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~WvpgH~g~~gNe~  333 (483)
                      +..||+.|+..||+.+.+.+.+++.|.|||+.+++.|++.......+..+...+..+.+....+.|.|||    .++|..
T Consensus         1 ~~~aE~~al~~al~~a~~~g~~~i~v~sDs~~vv~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~----r~~N~~   76 (87)
T PF13456_consen    1 PLEAEALALLEALQLAWELGIRKIIVESDSQLVVDAINGRSSSRSELRPLIQDIRSLLDRFWNVSVSHIP----REQNKV   76 (87)
T ss_dssp             HHHHHHHHHHHHHHHHHCCT-SCEEEEES-HHHHHHHTTSS---SCCHHHHHHHHHHHCCCSCEEEEE------GGGSHH
T ss_pred             CcHHHHHHHHHHHHHHHHCCCCEEEEEecCccccccccccccccccccccchhhhhhhccccceEEEEEC----hHHhHH
Confidence            4689999999999999999999999999999999999987554335666677777788889999999999    889999


Q ss_pred             HhHHHHhhhc
Q psy14885        334 ADQLAKNSIN  343 (483)
Q Consensus       334 AD~lAk~a~~  343 (483)
                      ||.|||.|.+
T Consensus        77 A~~LA~~a~~   86 (87)
T PF13456_consen   77 ADALAKFALS   86 (87)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHhh
Confidence            9999999864

>PF05473 Herpes_UL45: UL45 protein; InterPro: IPR008646 This family consists several UL45 proteins and homologues found in the herpes simplex virus family

Probab=98.91  E-value=6.8e-09  Score=95.32  Aligned_cols=55  Identities=42%  Similarity=0.738  Sum_probs=48.4

Q ss_pred             cCCCcccccccCCeEEEEecCCCC-CHHHHHHHhhhcCCcccccCCHhHHHHHHHHh
Q psy14885         26 ELRCPQHWVQYRDSCYRFVKSPLK-TRNDAKLNCKSLDSDLANVNDADEHGFIMYQL   81 (483)
Q Consensus        26 ~~~C~~gw~~~~~~Cy~~~~~~~~-tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~   81 (483)
                      ...||+||+.|++.||+++..+ + +|.+|+..|+.+++.|+.+++......+....
T Consensus        82 ~~~CP~~Wi~~~~~Cy~~~~~~-~~t~~eA~~~C~~~~s~L~~~~~~~~L~~ll~~~  137 (200)
T PF05473_consen   82 CGPCPKGWIGYNNSCYRFSNSP-KKTWEEARNICAAYNSTLANVNNAKSLLELLDVL  137 (200)
T ss_pred             CCCCCccceeeCCEEEEEeCCC-CcCHHHHHHHHHhcCCcCCCchhHHHHHHHHHHh
Confidence            7889999999999999999997 7 99999999999999999998877765555443

The herpes simplex virus UL45 gene encodes an 18 kDa virion envelope protein whose function remains unknown. It has been suggested that the 18 kDa UL45 gene product is required for efficient growth in the central nervous system at low doses and may play an important role under the conditions of a naturally acquired infection []. The Equine herpesvirus 1 UL45 protein represents a type II membrane glycoprotein which has found to be non-essential for EHV-1 growth in vitro but deletion reduces the viruses' replication efficiency [].

>PHA02672 ORF110 EEV glycoprotein; Provisional

Probab=97.56  E-value=0.00025  Score=59.90  Aligned_cols=67  Identities=19%  Similarity=0.311  Sum_probs=53.3

Q ss_pred             cCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccC
Q psy14885         26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQ   98 (483)
Q Consensus        26 ~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~   98 (483)
                      ..-|++||.+|.+.||.-..- +.+=+.|...|.++.|+|..+-+..-.+-|..+.     ....||+|-++.
T Consensus        47 ~~AC~~GWvp~dd~CyLnT~~-q~s~~~A~~iC~~~~a~lP~~pn~~hLKgVm~lt-----~~r~FW~thh~~  113 (166)
T PHA02672         47 KEACENGWVPIKDLCVLNTHV-ITNVTLAHDICASMDGDPPATPNTMLLKGIMFLT-----GERSFWMTHHDA  113 (166)
T ss_pred             hhhhhcCCeeccCEEEEecce-eecccHHHHHHHhccCCCCCCCCHhHhhheeeEe-----cccEEEEEcccc
Confidence            456999999999999998888 5999999999999999999977665555444443     556777776643

>PHA03093 EEV glycoprotein; Provisional

Probab=96.91  E-value=0.0013  Score=58.04  Aligned_cols=44  Identities=39%  Similarity=0.551  Sum_probs=36.8

Q ss_pred             ccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHh
Q psy14885         35 QYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQL   81 (483)
Q Consensus        35 ~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~   81 (483)
                      .|++.||.++.+| .+|++|...|...|+.|..-+-  ...+|..++
T Consensus       105 ~~~~~C~~~~~ep-kTf~dA~~~C~~~g~~LPs~~l--~~~WL~dYL  148 (185)
T PHA03093        105 VYDGSCYIFHSEP-KTFSDAKADCAKKSSTLPNSNL--MTTWLSDYL  148 (185)
T ss_pred             ecCCEeEEecCCC-cCHHHHHHHHHhcCCcCCCcch--HHHHHHHHh
Confidence            5688999999998 9999999999999999988332  223777777

>PHA02673 ORF109 EEV glycoprotein; Provisional

Probab=96.86  E-value=0.0038  Score=53.80  Aligned_cols=46  Identities=20%  Similarity=0.344  Sum_probs=38.0

Q ss_pred             cccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHh
Q psy14885         34 VQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQL   81 (483)
Q Consensus        34 ~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~   81 (483)
                      +.++++||.++ .| .+|++|...|.+.|+.|.+..-..+..+|..++
T Consensus        80 I~~~~~Cltl~-~p-~tf~eAn~~C~~~g~~LPs~~l~~~~pWL~dYL  125 (161)
T PHA02673         80 INAGNKCLTLK-YP-DTWTNANERCKELGQRLPSPSINKKYPWLTDYL  125 (161)
T ss_pred             cccCCeeEEeC-CC-CcHHHHHHHHHhcCCcCCCCcccccCcHHHHHh
Confidence            46688999999 87 899999999999999999876555555666665

>PF05966 Chordopox_A33R: Chordopoxvirus A33R protein; InterPro: IPR009238 This family consists of several Chordopoxvirus A33R proteins

Probab=95.82  E-value=0.003  Score=56.37  Aligned_cols=33  Identities=24%  Similarity=0.561  Sum_probs=26.5

Q ss_pred             cccCCeEEEEecCCCCCHHHHHHHhhhcCCcccc
Q psy14885         34 VQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLAN   67 (483)
Q Consensus        34 ~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~   67 (483)
                      +.+++.||.+..+| .+|++|...|.+.|++|.+
T Consensus       108 I~~~n~Cl~~~~~p-~T~~~A~~~C~~~g~~LPs  140 (190)
T PF05966_consen  108 IVYDNKCLTLNYEP-KTFDEANSDCNNKGQTLPS  140 (190)
T ss_dssp             EEETTEEEEEEEEE-EEHHHHHHHHHHTT-B---
T ss_pred             cccCCEEEEecCCC-CCHHHHHHHHHhcCCcCCC
Confidence            45678999999997 8999999999999999987

A33R plays a role in promoting Ab-resistant cell-to-cell spread of virus [] and interacts with A36R to incorporate the protein into the outer membrane of intracellular enveloped virions (IEV) [].; PDB: 3K7B_A.

>PF13966 zf-RVT: zinc-binding in reverse transcriptase

Probab=94.01  E-value=0.043  Score=43.28  Aligned_cols=43  Identities=30%  Similarity=0.501  Sum_probs=30.8

Q ss_pred             eeeeecCcccc-c--cccccCCCCCCce-ecCC-CCCccccc-cccCcH
Q psy14885        403 LTRLRIGHTRI-T--HSYLFTKTPHPIC-TCGF-PLTVKHIF-ECNKYK  445 (483)
Q Consensus       403 l~qlrtGH~~l-~--h~~~~~~~~~p~C-~Cg~-~et~~Hil-~Cp~~~  445 (483)
                      +.-.|.-|.++ +  -+.+.+...++.| .|+. +||++|+| .||...
T Consensus        35 ~f~W~~~~~rL~t~~~l~~r~~~~~~~C~~C~~~~Et~~Hlf~~C~~a~   83 (86)
T PF13966_consen   35 FFLWRALHNRLPTKDNLQRRGIQVDPICPLCGNEEETIEHLFFHCPFAR   83 (86)
T ss_pred             EEeeeeccccchhhhhhhccCCccCCccccCCCccccccceeccCcCcc
Confidence            44455555565 2  3555667788999 9997 89999996 999753

>cd03519 Link_domain_HAPLN_module_2 Link_domain_HAPLN_module_2; this link domain is found in the second link module of proteins similar to the vertebrate HAPLN (hyaluronan/HA and proteoglycan binding link) protein family which includes cartilage link protein

Probab=86.10  E-value=0.55  Score=37.05  Aligned_cols=25  Identities=20%  Similarity=0.220  Sum_probs=22.2

Q ss_pred             ecCCCCCHHHHHHHhhhcCCcccccC
Q psy14885         44 VKSPLKTRNDAKLNCKSLDSDLANVN   69 (483)
Q Consensus        44 ~~~~~~tw~~A~~~C~~~g~~L~~i~   69 (483)
                      .+. +.||.+|++.|+..|++|+++.
T Consensus         7 ~~~-~l~f~eA~~aC~~~ga~lAs~~   31 (91)
T cd03519           7 HPG-KLTFSEAVAACQRDGAQIAKVG   31 (91)
T ss_pred             Ccc-ccCHHHHHHHHHHcCCEeCCHH
Confidence            456 6999999999999999999884

The link domain is a HA-binding domain. HAPLNs contain two contiguous link modules. Both link modules of cartilage link protein are involved in interaction with HA. In cartilage, a chondroitin sulfate proteoglycan core protein (CSPG) aggrecan forms cartilage link protein stabilized aggregates with HA. These aggregates contribute to the tissue's load bearing properties. Aggregates with other CSPGs substituting for aggregan may contribute to the structural integrity of many different tissues. Members of the vertebrate HAPLN gene family are physically linked adjacent to CSPG genes.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	483
2bpd_A	142	Dectin-1; receptor, beta-glucan, fungal recognitio	2e-14
3vpp_A	132	C-type lectin domain family 9 member A; dendritic	7e-14
2xr6_A	170	CD209 antigen; sugar binding protein, carbohydrate	5e-13
1ypq_A	135	Oxidised low density lipoprotein (lectin-like) rec	7e-13
2b6b_D	175	CD209 antigen; cryo EM dengue CRD DC-SIGN, icosahe	1e-12
2vuv_A	129	Codakine; sugar-binding protein, C-type, lectin, m	2e-12
1sl6_A	184	C-type lectin DC-signr; sugar binding protein; HET	2e-12
2c6u_A	122	CLEC1B protein; lectin, rhodocytin, aggretin, C-ty	3e-12
2ls8_A	156	C-type lectin domain family 4 member D; structural	3e-12
2zib_A	133	Type II antifreeze protein; thermal hysteresis, le	4e-12
1tdq_B	130	Aggrecan core protein; extracellular matrix, lecti	6e-12
2py2_A	136	Antifreeze protein type II; type II antifreeze pro	8e-12
3bdw_A	123	Natural killer cells antigen CD94; NK cells, recep	8e-12
1hq8_A	123	NKG2-D; homodimer, CIS-proline, apoptosis; 1.95A {	1e-11
3ff7_C	112	Killer cell lectin-like receptor subfamily G membe	1e-11
2afp_A	129	Protein (SEA raven type II antifreeze protein); re	1e-11
3ff9_A	115	Killer cell lectin-like receptor subfamily G membe	1e-11
3hup_A	130	Early activation antigen CD69; C-type lectin-like	2e-11
1fm5_A	199	Early activation antigen CD69; C-type lectin-like	2e-11
2ox9_A	140	Collectin placenta 1; C-type lectin, sugar binding	2e-11
1mpu_A	138	NKG2-D type II integral membrane protein; C-type l	2e-11
3g8k_A	130	Lectin-related NK cell receptor LY49L1; natural ki	2e-11
3bdw_B	120	NKG2-A/NKG2-B type II integral membrane protein; N	3e-11
2yhf_A	118	C-type lectin domain family 5 member A; immune sys	3e-11
3m9z_A	139	Killer cell lectin-like receptor subfamily B MEMB;	3e-11
1qdd_A	144	Lithostathine; pancreatic stone inhibitor, metal b	4e-11
3rs1_A	122	C-type lectin domain family 2 member I; C-type lec	4e-11
1dv8_A	128	Asialoglycoprotein receptor 1; C-type lectin CRD,	7e-11
3c22_A	156	C-type lectin domain family 4 member K; coiled coi	1e-10
2h2t_B	175	Low affinity immunoglobulin epsilon FC receptor (	1e-10
1htn_A	182	Tetranectin; plasminogen binding, kringle 4, alpha	1e-10
1fvu_B	125	Botrocetin beta chain; VON WILLBRAND factor modula	2e-10
1tn3_A	137	Tetranectin; plasminogen binding, kringle 4, C-typ	2e-10
3ubu_A	131	Agglucetin subunit alpha-1; platelet inhibiting, a	2e-10
1jwi_A	131	Bitiscetin; domain swapping, C-type lectin, toxin;	2e-10
3kqg_A	182	Langerin, C-type lectin domain family 4 member K;	3e-10
2e3x_C	122	Coagulation factor X-activating enzyme light CHAI;	3e-10
1pwb_A	177	SP-D, PSP-D, pulmonary surfactant-associated prote	3e-10
1egg_A	147	Macrophage mannose receptor; C-type lectin, sugar	4e-10
1jwi_B	125	Platelet aggregation inducer; domain swapping, C-t	4e-10
3bx4_B	146	Aggretin beta chain; toxin; 1.70A {Agkistrodon rho	4e-10
1wmz_A	140	Lectin CEL-I, N-acetyl-D-galactosamine-specific C-	4e-10
2kv3_A	131	Regenerating islet-derived protein 4; GISP, C-type	5e-10
3ubu_B	126	Agglucetin subunit beta-2; platelet inhibiting, ag	8e-10
3c8j_A	203	Natural killer cell receptor LY49C; MHC, virus, im	9e-10
1sb2_B	129	Rhodocetin beta subunit; C-type lectin, domain swa	9e-10
1gz2_A	142	Ovocleidin-17, OC-17 ovocleidin; structural protei	1e-09
1umr_C	125	Convulxin beta, CVX beta; lectin, C-type lectin, p	1e-09
3g8l_A	190	Lectin-related NK cell receptor LY49L1; natural ki	1e-09
3gpr_D	124	Rhodocetin subunit delta; disulfide bond, lectin,	1e-09
3pbf_A	148	Pulmonary surfactant-associated protein A; collect	2e-09
1oz7_A	131	Echicetin A-chain; platelet aggregation, dimer, to	2e-09
1c3a_B	125	Flavocetin-A: beta subunit; C-type lectin-like dom	2e-09
1j34_B	123	Coagulation factor IX-binding protein B chain; mag	2e-09
1oz7_B	123	Echicetin B-chain; platelet aggregation, dimer, to	2e-09
1jzn_A	135	Galactose-specific lectin; C-type lectin, protein-	3e-09
1ukm_B	128	EMS16 B chain, EMS16 subunit B; domain swapping, C	3e-09
1c3a_A	135	Flavocetin-A: alpha subunit; C-type lectin-like do	3e-09
1ukm_A	134	EMS16 A chain, EMS16 subunit A; domain swapping, C	4e-09
1uv0_A	149	Pancreatitis-associated protein 1; lectin, C-type,	4e-09
1umr_A	135	Convulxin alpha, CVX alpha; lectin, C-type lectin,	5e-09
3gpr_C	134	Rhodocetin subunit gamma; disulfide bond, lectin,	5e-09
3bx4_A	136	Aggretin alpha chain; toxin; 1.70A {Agkistrodon rh	6e-09
2e3x_B	134	Coagulation factor X-activating enzyme light CHAI;	8e-09
1sb2_A	133	Rhodocetin alpha subunit; C-type lectin, domain sw	1e-08
2kq2_A	147	Ribonuclease H-related protein; PSI, NESG, protein	1e-08
1j34_A	129	Coagulation factor IX-binding protein A chain; mag	2e-08
3alu_A	157	Lectin CEL-IV, C-type; C-type lectin, raffinose, s	2e-08
1fvu_A	133	Botrocetin alpha chain; VON WILLBRAND factor modul	6e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04
1rtm_1	149	Mannose-binding protein-A; lectin; 1.80A {Rattus n	2e-07
1buu_A	168	Protein (mannose-binding protein A); lectin, HOST	2e-07
1hup_A	141	Mannose-binding protein; alpha-helical coiled-coil	3e-07
1wk1_A	150	Hypothetical protein YK1067A12; lectin C-type doma	2e-06
3p1g_A	165	Xenotropic murine leukemia virus-related virus (X	3e-05
2qkb_A	154	Ribonuclease H1, HS-RNAse HC, RNAse H1; RNA/DNA hy	4e-05
1byf_A	125	TC14, protein (polyandrocarpa lectin); C-type lect	4e-05
2msb_A	115	Mannose-binding protein-A; lectin; HET: BMA MAN; 1	6e-05
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	1e-04
1g1t_A	157	E-selectin; EGF, adhesion molecule, SLEX, immune s	2e-04
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	2e-04
1rdl_1	113	SUB-MBP-C, mannose-binding protein-C; C-type lecti	4e-04
1jl1_A	155	Ribonuclease HI; RNAse HI, protein stability, ther	4e-04

>2bpd_A Dectin-1; receptor, beta-glucan, fungal recognition, C-type lectin-like domain, CTLD, carbohydrate; 1.5A {Mus musculus} PDB: 2bph_A 2bpe_A 2cl8_A* Length = 142

 Score = 69.4 bits (170), Expect = 2e-14
 Identities = 18/105 (17%), Positives = 38/105 (36%), Gaps = 8/105 (7%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
           C  +W+ +  SCY F  S   +   +K +C  L + L  ++++ E  FI  Q      + 
Sbjct: 17  CLPNWIMHGKSCYLFSFSG-NSWYGSKRHCSQLGAHLLKIDNSKEFEFIESQT--SSHRI 73

Query: 89  RKWYFGGTQQSPN---LWVNEDDPQRRKWYFGGTQQSPNLWVNED 130
             ++ G ++        W +        +        P   +  +
Sbjct: 74  NAFWIGLSRNQSEGPWFWEDGSAFFPNSFQVRNAV--PQESLLHN 116

>3vpp_A C-type lectin domain family 9 member A; dendritic cell, C-type lectin-like domain, membrane, immune; 1.64A {Homo sapiens} Length = 132

 Score = 67.4 bits (165), Expect = 7e-14
 Identities = 27/111 (24%), Positives = 42/111 (37%), Gaps = 17/111 (15%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
           CP +W+Q R+SCY   +      + ++ NC    S L  +   +E  FI   L       
Sbjct: 4   CPNNWIQNRESCYYVSEIW-SIWHTSQENCLKEGSTLLQIESKEEMDFITGSLRKIKGSY 62

Query: 89  RKWYFGGTQQSPN---LWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNE 136
             W  G +Q   +   LW +            G+  SP L   E   + N+
Sbjct: 63  DYW-VGLSQDGHSGRWLWQD------------GSSPSPGLLPAERSQSANQ 100

>2xr6_A CD209 antigen; sugar binding protein, carbohydrate binding, mannose; HET: MAN 07B; 1.35A {Homo sapiens} PDB: 1sl4_A* 2it6_A* 1k9i_A* 2xr5_A* 1sl5_A* 2it5_A* 1xph_A 1k9j_A* Length = 170

 Score = 66.0 bits (161), Expect = 5e-13
 Identities = 25/108 (23%), Positives = 39/108 (36%), Gaps = 14/108 (12%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
           CP  W  ++ +CY    S  +  +D+   CK + + L  +  A+E  F+  Q       R
Sbjct: 22  CPWEWTFFQGNCYFMSNSQ-RNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSS--RSNR 78

Query: 89  RKWYFGGT-QQSPNLWVNED-----DPQRRKWYFGGTQQSPNLWVNED 130
             W  G +       W   D        ++ W  G     PN    ED
Sbjct: 79  FTW-MGLSDLNQEGTWQWVDGSPLLPSFKQYWNRG----EPNNVGEED 121

>1ypq_A Oxidised low density lipoprotein (lectin-like) receptor 1; oxidized low density lipoprotein receptor, LOX-1, CTLD, C- type lectin like domain; 1.40A {Homo sapiens} SCOP: d.169.1.1 PDB: 1ypu_A 1yxk_A 3vlg_A 1ypo_A 1yxj_A Length = 135

 Score = 64.8 bits (158), Expect = 7e-13
 Identities = 20/105 (19%), Positives = 41/105 (39%), Gaps = 9/105 (8%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
           CPQ W+ + ++CY F          ++  C SLD+ L  +N   +  FI   +       
Sbjct: 9   CPQDWIWHGENCYLFSSGS-FNWEKSQEKCLSLDAKLLKINSTADLDFIQQAI---SYSS 64

Query: 89  RKWYFGGTQQSPN---LWVNEDDPQRRKWYFGGTQQSPNLWVNED 130
             ++ G ++++P+   LW +        +   G       + +  
Sbjct: 65  FPFWMGLSRRNPSYPWLWEDGSPLMPHLFRVRGAV--SQTYPSGT 107

>2b6b_D CD209 antigen; cryo EM dengue CRD DC-SIGN, icosahedral virus, virus-recepto; 25.00A {Homo sapiens} SCOP: d.169.1.1 Length = 175

 Score = 64.9 bits (158), Expect = 1e-12
 Identities = 24/108 (22%), Positives = 39/108 (36%), Gaps = 14/108 (12%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
           CP  W  ++ +CY    S  +  +D+   CK + + L  +  A+E  F+  Q        
Sbjct: 27  CPWEWTFFQGNCYFMSNSQ-RNWHDSITACKEVGAQLVVIKSAEEQNFLQLQS---SRSN 82

Query: 89  RKWYFGGT-QQSPNLWVNED-----DPQRRKWYFGGTQQSPNLWVNED 130
           R  + G +       W   D        ++ W  G     PN    ED
Sbjct: 83  RFTWMGLSDLNQEGTWQWVDGSPLLPSFKQYWNRG----EPNNVGEED 126

>2vuv_A Codakine; sugar-binding protein, C-type, lectin, mannose, invertebrate; HET: CIT; 1.3A {Codakia orbicularis} PDB: 2vuz_A* Length = 129

 Score = 63.5 bits (155), Expect = 2e-12
 Identities = 17/80 (21%), Positives = 32/80 (40%), Gaps = 1/80 (1%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
           CP  W Q+ D CY +  +   +   A+ +C++L   LA  + A E+  +++         
Sbjct: 2   CPDGWTQFLDLCYIYQSAK-ASWASAQSSCQALGGILAEPDTACENEVLIHMCKENGDAG 60

Query: 89  RKWYFGGTQQSPNLWVNEDD 108
               + G Q+    W     
Sbjct: 61  SFGPWLGGQKVGGAWQWSSS 80

>1sl6_A C-type lectin DC-signr; sugar binding protein; HET: GAL NDG FUC; 2.25A {Homo sapiens} SCOP: d.169.1.1 PDB: 1xar_A Length = 184

 Score = 64.5 bits (157), Expect = 2e-12
 Identities = 27/118 (22%), Positives = 43/118 (36%), Gaps = 14/118 (11%)

Query: 19  SQTIDELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIM 78
               + L   CP+ W  ++ +CY    S  +  +D+   C+ + + L  +  A+E  F+ 
Sbjct: 43  KTAFERLCRHCPKDWTFFQGNCYFMSNSQ-RNWHDSVTACQEVRAQLVVIKTAEEQNFLQ 101

Query: 79  YQLFWQDPQRRKWYFGGT-QQSPNLWVNED-----DPQRRKWYFGGTQQSPNLWVNED 130
            Q       R  W  G +       W   D        +R W  G     PN   NED
Sbjct: 102 LQT--SRSNRFSW-MGLSDLNQEGTWQWVDGSPLSPSFQRYWNSG----EPNNSGNED 152

>2c6u_A CLEC1B protein; lectin, rhodocytin, aggretin, C-type lectin-like, platelets, thrombosis; 1.6A {Homo sapiens} Length = 122

 Score = 62.8 bits (153), Expect = 3e-12
 Identities = 17/101 (16%), Positives = 34/101 (33%), Gaps = 18/101 (17%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQL---FW-- 83
           C  +W  Y DSCY F +    T  ++K  C  +++ L  +++ +   +I  +     W  
Sbjct: 3   CDTNWRYYGDSCYGFFRHN-LTWEESKQYCTDMNATLLKIDNRNIVEYIKARTHLIRWVG 61

Query: 84  --QDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQS 122
             +      W           W +        + F    + 
Sbjct: 62  LSRQKSNEVW----------KWEDGSVISENMFEFLEDGKG 92

>2ls8_A C-type lectin domain family 4 member D; structural genomics, NEW YORK structural genomics research consortium, nysgrc, PSI-biology, immune system; NMR {Homo sapiens} Length = 156

 Score = 63.6 bits (155), Expect = 3e-12
 Identities = 23/107 (21%), Positives = 45/107 (42%), Gaps = 14/107 (13%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
           CP  W  ++ +CY  +    KT  +++ NC  + + L  ++   E  FI+  L     +R
Sbjct: 3   CPIDWRAFQSNCYFPLTDN-KTWAESERNCSGMGAHLMTISTEAEQNFIIQFL----DRR 57

Query: 89  RKWYFGGT-QQSPNLWVNED----DPQRRKWYFGGTQQSPNLWVNED 130
             ++ G   + +   W   D    +P+R  W+       P+    E+
Sbjct: 58  LSYFLGLRDENAKGQWRWVDQTPFNPRRVFWHKN----EPDNSQGEN 100

>2zib_A Type II antifreeze protein; thermal hysteresis, lectin; 1.34A {Brachyopsis rostratus} Length = 133

 Score = 62.4 bits (152), Expect = 4e-12
 Identities = 21/110 (19%), Positives = 39/110 (35%), Gaps = 20/110 (18%)

Query: 27  LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFI---MYQLFW 83
           L CP  W  +   C+    +   T + A+ NC +    LA+++  +E  +I   +  + W
Sbjct: 8   LVCPAGWTLHGQRCFYSEATA-MTWDLAEANCVNKGGHLASIHSLEEQLYIKDIVAGIVW 66

Query: 84  QDPQRRKWYFGGTQQSPN---LWVNEDDPQRRKWYFGGTQQSPNLWVNED 130
                     GG+         W +      R W        PN  +++ 
Sbjct: 67  ---------IGGSACKVAGAWSWTDGTPVDYRTWCPT----KPNDILSDC 103

>1tdq_B Aggrecan core protein; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: d.169.1.1 Length = 130

 Score = 62.0 bits (151), Expect = 6e-12
 Identities = 14/59 (23%), Positives = 27/59 (45%), Gaps = 4/59 (6%)

Query: 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFI---MYQLFW 83
          +C + W +++  CYR      +T  DA+  C+   S L+++   +E  F+        W
Sbjct: 6  QCEEGWTKFQGHCYRHFPDR-ETWVDAERRCREQQSHLSSIVTPEEQEFVNKNAQDYQW 63

>2py2_A Antifreeze protein type II; type II antifreeze protein; 1.70A {Clupea harengus} Length = 136

 Score = 61.6 bits (150), Expect = 8e-12
 Identities = 19/105 (18%), Positives = 36/105 (34%), Gaps = 11/105 (10%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
           CP  W  +   C+ F         DA+ +C    ++LA+++  +E  F+           
Sbjct: 4   CPTDWKMFNGRCFLFNPLQ-LHWADAQESCMKEGANLASIHSLEESTFVKELT---SADL 59

Query: 89  RKWYFGGTQQSPN---LWVNEDDPQRRKWYFGGTQQSPNLWVNED 130
              + GGT    +    W++        W        P+  + E 
Sbjct: 60  IPSWIGGTDCQVSTRWFWMDSTSMDYADWCAA----QPDTTLTEC 100

>3bdw_A Natural killer cells antigen CD94; NK cells, receptor, glycoprotein, lectin, signal-A transmembrane, immune system receptor; 2.50A {Homo sapiens} SCOP: d.169.1.1 PDB: 3cdg_J 1b6e_A 3cii_G Length = 123

 Score = 61.3 bits (149), Expect = 8e-12
 Identities = 24/97 (24%), Positives = 36/97 (37%), Gaps = 17/97 (17%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIM--YQLFW--- 83
           C + WV YR +CY       KT N+++  C S  S L  + + DE  F+    Q +W   
Sbjct: 5   CQEKWVGYRCNCYFISSEQ-KTWNESRHLCASQKSSLLQLQNTDELDFMSSSQQFYWIGL 63

Query: 84  -QDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGT 119
               +   W          LW N     +  +    T
Sbjct: 64  SYSEEHTAW----------LWENGSALSQYLFPSFET 90

>1hq8_A NKG2-D; homodimer, CIS-proline, apoptosis; 1.95A {Mus musculus} SCOP: d.169.1.1 PDB: 1jsk_A 1kcg_A* Length = 123

 Score = 60.9 bits (148), Expect = 1e-11
 Identities = 21/97 (21%), Positives = 36/97 (37%), Gaps = 17/97 (17%)

Query: 28  RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQL--FW-- 83
            CP +W+ +R++CY+F     KT N ++ +C S +S L  +   +E  F+       W  
Sbjct: 5   PCPNNWICHRNNCYQFFNEE-KTWNQSQASCLSQNSSLLKIYSKEEQDFLKLVKSYHWMG 63

Query: 84  --QDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGG 118
             Q P    W           W +       +     
Sbjct: 64  LVQIPANGSW----------QWEDGSSLSYNQLTLVE 90

>3ff7_C Killer cell lectin-like receptor subfamily G member 1; KLRG1-cadherin complex, calcium, cell adhesion, cell junction, cell membrane; 1.80A {Homo sapiens} Length = 112

 Score = 60.5 bits (147), Expect = 1e-11
 Identities = 19/86 (22%), Positives = 29/86 (33%), Gaps = 6/86 (6%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
           CP  W++Y + CY F     K  N +   C + DS L  + D  E   +   L       
Sbjct: 1   CPDRWMKYGNHCYYFSVEE-KDWNSSLEFCLARDSHLLVITDNQEMSLLQVFL-----SE 54

Query: 89  RKWYFGGTQQSPNLWVNEDDPQRRKW 114
              + G    S   W +       + 
Sbjct: 55  AFSWIGLRNNSGWRWEDGSPLNFSRI 80

>2afp_A Protein (SEA raven type II antifreeze protein); recombinant SEA raven protein, solution backbone fold, C- type lectin; NMR {Hemitripterus americanus} SCOP: d.169.1.1 Length = 129

 Score = 61.2 bits (149), Expect = 1e-11
 Identities = 23/109 (21%), Positives = 35/109 (32%), Gaps = 20/109 (18%)

Query: 28  RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFI---MYQLFWQ 84
            CP  W    D C  +  +   T   A+ NC  L   LA+++  +EH FI      + W 
Sbjct: 6   NCPAGWQPLGDRCIYYETTA-MTWALAETNCMKLGGHLASIHSQEEHSFIQTLNAGVVW- 63

Query: 85  DPQRRKWYFGGTQQSPN---LWVNEDDPQRRKWYFGGTQQSPNLWVNED 130
                    GG+         W +      R W        P+  +   
Sbjct: 64  --------IGGSACLQAGAWTWSDGTPMNFRSWCST----KPDDVLAAC 100

>3ff9_A Killer cell lectin-like receptor subfamily G member 1; natural killer cell receptor KLTG1, glycoprotein, membrane, phosphoprotein, signal-anchor; 1.80A {Mus musculus} PDB: 3ff8_C Length = 115

 Score = 60.5 bits (147), Expect = 1e-11
 Identities = 19/87 (21%), Positives = 26/87 (29%), Gaps = 9/87 (10%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQL----FW- 83
           CP  W +    CY F     K  N +   C    S L    D          L    +W 
Sbjct: 2   CPILWTRNGSHCYYFSMEK-KDWNSSLKFCADKGSHLLTFPDNQGVKLFGEYLGQDFYWI 60

Query: 84  --QDPQRRKWYFGGTQQSPNLWVNEDD 108
             ++    +W  GG   S  +  N   
Sbjct: 61  GLRNIDGWRW-EGGPALSLRILTNSLI 86

>3hup_A Early activation antigen CD69; C-type lectin-like domain, disulfide bond, glycoprotein, LEC membrane, phosphoprotein, signal-anchor, transmembrane; 1.37A {Homo sapiens} PDB: 1e87_A 1e8i_A 3cck_A Length = 130

 Score = 60.5 bits (147), Expect = 2e-11
 Identities = 13/71 (18%), Positives = 24/71 (33%), Gaps = 8/71 (11%)

Query: 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQL----FW 83
           C + WV Y+  CY       ++   A+  C    + LA ++   +  F+         W
Sbjct: 15 SCSEDWVGYQRKCYFISTVK-RSWTSAQNACSEHGATLAVIDSEKDMNFLKRYAGREEHW 73

Query: 84 ---QDPQRRKW 91
             +      W
Sbjct: 74 VGLKKEPGHPW 84

>1fm5_A Early activation antigen CD69; C-type lectin-like domain, natural killer cell receptor, lectin, C-type lectin, immune system; 2.27A {Homo sapiens} SCOP: d.169.1.1 Length = 199

 Score = 62.3 bits (151), Expect = 2e-11
 Identities = 17/96 (17%), Positives = 29/96 (30%), Gaps = 8/96 (8%)

Query: 3   LISSCLFIFVSFHSVFSQTIDELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLD 62
           +  S           FS   D     C + WV Y+  CY       ++   A+  C    
Sbjct: 59  IALSVGQYNCPGQYTFSMPSDSHVSSCSEDWVGYQRKCYFISTVK-RSWTSAQNACSEHG 117

Query: 63  SDLANVNDADEHGFIMYQL----FW---QDPQRRKW 91
           + LA ++   +  F+         W   +      W
Sbjct: 118 ATLAVIDSEKDMNFLKRYAGREEHWVGLKKEPGHPW 153

>2ox9_A Collectin placenta 1; C-type lectin, sugar binding protein; HET: GAL NAG FUC; 1.95A {Mus musculus} PDB: 2ox8_A Length = 140

 Score = 60.9 bits (148), Expect = 2e-11
 Identities = 27/108 (25%), Positives = 40/108 (37%), Gaps = 12/108 (11%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
           CP HW  + D CY F     +   DAKL C+   S L  +N  +E  +I      ++   
Sbjct: 5   CPPHWKNFTDKCYYFSLEK-EIFEDAKLFCEDKSSHLVFINSREEQQWIKKHTVGRESH- 62

Query: 89  RKWYFGGTQQSPN---LWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTN 133
             W  G T         W++      + W  G     P+ W +  G  
Sbjct: 63  --W-IGLTDSEQESEWKWLDGSPVDYKNWKAG----QPDNWGSGHGPG 103

>1mpu_A NKG2-D type II integral membrane protein; C-type lectin-like domain, immune system; 2.50A {Homo sapiens} SCOP: d.169.1.1 PDB: 1hyr_B Length = 138

 Score = 60.6 bits (147), Expect = 2e-11
 Identities = 17/99 (17%), Positives = 34/99 (34%), Gaps = 17/99 (17%)

Query: 28  RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQL--FW-- 83
            CP++W+ Y+++CY+F     K   +++ +C S ++ L  V   ++   +       W  
Sbjct: 20  PCPKNWICYKNNCYQFFDES-KNWYESQASCMSQNASLLKVYSKEDQDLLKLVKSYHWMG 78

Query: 84  --QDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQ 120
               P    W           W +              Q
Sbjct: 79  LVHIPTNGSW----------QWEDGSILSPNLLTIIEMQ 107

>3bdw_B NKG2-A/NKG2-B type II integral membrane protein; NK cells, receptor, glycoprotein, lectin, signal-A transmembrane, immune system receptor; 2.50A {Homo sapiens} PDB: 3cdg_K 3cii_H Length = 120

 Score = 59.7 bits (145), Expect = 3e-11
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 3/58 (5%)

Query: 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQL--FW 83
           CP+ W+ Y +SCY   K   +T  ++ L C S +S L ++++ +E  F+       W
Sbjct: 6  HCPEEWITYSNSCYYIGKER-RTWEESLLACTSKNSSLLSIDNEEEMKFLSIISPSSW 62

>2yhf_A C-type lectin domain family 5 member A; immune system; 1.90A {Homo sapiens} Length = 118

 Score = 59.7 bits (145), Expect = 3e-11
 Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 5/59 (8%)

Query: 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQL----FW 83
          CP+ W  Y+  C+    S   + N+++  CK   S LA VN  ++  F+        ++
Sbjct: 2  CPKDWEFYQARCFFLSTSE-SSWNESRDFCKGKGSTLAIVNTPEKLKFLQDITDAEKYF 59

>3m9z_A Killer cell lectin-like receptor subfamily B MEMB; C-type lectin-like domain, domain swapping, disulfide bond, transmembrane protein; 1.70A {Mus musculus} PDB: 3t3a_A Length = 139

 Score = 60.2 bits (146), Expect = 3e-11
 Identities = 19/99 (19%), Positives = 39/99 (39%), Gaps = 7/99 (7%)

Query: 27  LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDP 86
           L CPQ W+ +RD C+   +    T  +  ++C    + L  + D +E  F++  +     
Sbjct: 4   LECPQDWLSHRDKCFHVSQVS-NTWEEGLVDCDGKGATLMLIQDQEELRFLLDSI---KE 59

Query: 87  QRRKWYFGGTQQSPN---LWVNEDDPQRRKWYFGGTQQS 122
           +   ++ G     P+    W+N            G  ++
Sbjct: 60  KYNSFWIGLRYTLPDMNWKWINGSTLNSDVLKITGDTEN 98

>1qdd_A Lithostathine; pancreatic stone inhibitor, metal binding protein; HET: SIA NDG GAL; 1.30A {Homo sapiens} SCOP: d.169.1.1 PDB: 1lit_A Length = 144

 Score = 60.1 bits (146), Expect = 4e-11
 Identities = 23/106 (21%), Positives = 39/106 (36%), Gaps = 9/106 (8%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDS-DLANVNDADEHGFIMYQLFWQDPQ 87
           CP+    YR  CY F +   +T  DA L C++++S +L +V    E  F+   +      
Sbjct: 14  CPEGTNAYRSYCYYFNEDR-ETWVDADLYCQNMNSGNLVSVLTQAEGAFVASLIKESGTD 72

Query: 88  RRKWYFGGTQQSPN---LWVNEDDPQRRKWYFGGTQQSPNLWVNED 130
               + G      N    W +      + W  G    +P+      
Sbjct: 73  DFNVWIGLHDPKKNRAWHWSSGSLVSYKSWGIG----APSSVNPGY 114

>3rs1_A C-type lectin domain family 2 member I; C-type lectin-like, ligand of NK receptor, natural killer CE receptors, surface of activated T lymphocytes; 1.94A {Mus musculus} Length = 122

 Score = 59.3 bits (144), Expect = 4e-11
 Identities = 12/59 (20%), Positives = 25/59 (42%), Gaps = 5/59 (8%)

Query: 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQL----FW 83
          C ++W    + C+ F   P +    A+  C + ++ LA  ++ +E  F+         W
Sbjct: 8  CSKNWTGVGNKCFYFSGYP-RNWTFAQAFCMAQEAQLARFDNEEELIFLKRFKGDFDSW 65

>1dv8_A Asialoglycoprotein receptor 1; C-type lectin CRD, signaling protein; 2.30A {Homo sapiens} SCOP: d.169.1.1 Length = 128

 Score = 58.9 bits (143), Expect = 7e-11
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 5/59 (8%)

Query: 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQL----FW 83
          CP +WV++  SCY F +S  K   DA   C+  D+ L  V   +E  F+ + +     W
Sbjct: 1  CPVNWVEHERSCYWFSRSG-KAWADADNYCRLEDAHLVVVTSWEEQKFVQHHIGPVNTW 58

>3c22_A C-type lectin domain family 4 member K; coiled coil, glycoprotein, membrane, signal-anchor, transmembrane, immune system, sugar binding protein; 1.50A {Homo sapiens} PDB: 3p5g_A* 3p5d_A* 3p5f_A* 3p5e_A* 3p5h_A* 3p5i_A* 3p7g_A* 3p7f_A* 3p7h_A* 3bc7_A* 3bbs_A* 3bc6_A* Length = 156

 Score = 59.0 bits (143), Expect = 1e-10
 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 5/59 (8%)

Query: 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIM----YQLFW 83
            Q W  ++ + Y F   P KT   A+  C S +S L +V    E  F+       ++W
Sbjct: 23 VSQGWKYFKGNFYYFSLIP-KTWYSAEQFCVSRNSHLTSVTSESEQEFLYKTAGGLIYW 80

>2h2t_B Low affinity immunoglobulin epsilon FC receptor ( IGE receptor) (FC-epsilon-RII)...; C-type lectin, calcium-bound, lectin domain; 1.30A {Homo sapiens} PDB: 2h2r_A 1t8c_A 1t8d_A Length = 175

 Score = 59.4 bits (144), Expect = 1e-10
 Identities = 14/59 (23%), Positives = 27/59 (45%), Gaps = 5/59 (8%)

Query: 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIM----YQLFW 83
          CP+ W+ ++  CY F K   K    A+  C  ++  L +++  +E  F+     +   W
Sbjct: 17 CPEKWINFQRKCYYFGKGT-KQWVHARYACDDMEGQLVSIHSPEEQDFLTKRASHTGSW 74

>1htn_A Tetranectin; plasminogen binding, kringle 4, alpha-helical coiled coil, C-type lectin, carbohydrate recognition domain; 2.80A {Homo sapiens} SCOP: d.169.1.1 h.1.1.1 Length = 182

 Score = 59.4 bits (144), Expect = 1e-10
 Identities = 18/105 (17%), Positives = 34/105 (32%), Gaps = 6/105 (5%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
           C +   +    C+       KT ++A  +C S    L+      E+  +   L       
Sbjct: 51  CLKGT-KVHMKCFLAFTQT-KTFHEASEDCISRGGTLSTPQTGSENDALYEYLRQSVGNE 108

Query: 89  RKWYFGGT-QQSPNLWVNEDD--PQRRKWYFGGTQQSPNLWVNED 130
            + + G     +   WV+        + W    T Q P+    E+
Sbjct: 109 AEIWLGLNDMAAEGTWVDMTGARIAYKNWETEITAQ-PDGGKTEN 152

>1fvu_B Botrocetin beta chain; VON WILLBRAND factor modulator, C-type lectin, metal- binding, loop exchanged dimer, toxin; 1.80A {Bothrops jararaca} SCOP: d.169.1.1 PDB: 1ijk_C 1u0n_C 1u0o_B Length = 125

 Score = 57.8 bits (140), Expect = 2e-10
 Identities = 19/95 (20%), Positives = 29/95 (30%), Gaps = 7/95 (7%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCK--SLDSDLANVNDADEHGFIMYQLFWQDP 86
           CP  W  Y   CYRF K      +DA+  C      + L +    +E  F+         
Sbjct: 2   CPPDWSSYEGHCYRFFKEW-MHWDDAEEFCTEQQTGAHLVSFQSKEEADFVRSLTSEMLK 60

Query: 87  QRRKWYFGGTQQSPN---LWVNEDDPQRRKWYFGG 118
               W  G +         W +  +     +Y   
Sbjct: 61  GDVVW-IGLSDVWNKCRFEWTDGMEFDYDDYYLIA 94

>1tn3_A Tetranectin; plasminogen binding, kringle 4, C-type lectin, carbohydrate recognition domain; 2.00A {Homo sapiens} SCOP: d.169.1.1 PDB: 1rjh_A 3l9j_C Length = 137

 Score = 57.8 bits (140), Expect = 2e-10
 Identities = 17/109 (15%), Positives = 35/109 (32%), Gaps = 6/109 (5%)

Query: 25  LELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQ 84
           L+  C +   +    C+       KT ++A  +C S    L+      E+  +   L   
Sbjct: 2   LQTVCLKGT-KVHMKCFLAFTQT-KTFHEASEDCISRGGTLSTPQTGSENDALYEYLRQS 59

Query: 85  DPQRRKWYFGGTQQSPN---LWVNEDDPQRRKWYFGGTQQSPNLWVNED 130
                + + G    +     + +       + W    T Q P+    E+
Sbjct: 60  VGNEAEIWLGLNDMAAEGTWVDMTGARIAYKNWETEITAQ-PDGGKTEN 107

>3ubu_A Agglucetin subunit alpha-1; platelet inhibiting, agkisacucetin, dimer, toxin, C-type LEC GPIB inhibitor, GPIB binding; 1.91A {Deinagkistrodon acutus} Length = 131

 Score = 57.4 bits (139), Expect = 2e-10
 Identities = 22/99 (22%), Positives = 32/99 (32%), Gaps = 9/99 (9%)

Query: 26  ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLD--SDLANVNDADEHGFIMYQLFW 83
           ++ C   W  Y  SCYR  K   KT +DA+  C        L ++  A E  F+   +  
Sbjct: 1   DVDCLPGWSAYDQSCYRVFKLL-KTWDDAEKFCTERPKGGHLVSIESAGERDFVAQLVSE 59

Query: 84  QDPQRRKWYFGGTQQSPN-----LWVNEDDPQRRKWYFG 117
                  W  G   QS        W +        +   
Sbjct: 60  NKQTDNVW-LGLKIQSKGQQCSTEWTDGSSVSYENFSEY 97

>1jwi_A Bitiscetin; domain swapping, C-type lectin, toxin; 2.00A {Bitis arietans} SCOP: d.169.1.1 PDB: 1uex_A Length = 131

 Score = 57.4 bits (139), Expect = 2e-10
 Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 1/49 (2%)

Query: 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFI 77
          C   W  Y+  CY+  K    T  DA+  C      LA+++  +E  F+
Sbjct: 4  CLPDWSSYKGHCYKVFKKV-GTWEDAEKFCVENSGHLASIDSKEEADFV 51

>3kqg_A Langerin, C-type lectin domain family 4 member K; trimer, NECK and CRD, coiled coil, immune system; 2.30A {Homo sapiens} Length = 182

 Score = 58.3 bits (141), Expect = 3e-10
 Identities = 25/109 (22%), Positives = 37/109 (33%), Gaps = 16/109 (14%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
             Q W  ++ + Y F   P KT   A+  C S +S L +V    E  F+     ++    
Sbjct: 49  VSQGWKYFKGNFYYFSLIP-KTWYSAEQFCVSRNSHLTSVTSESEQEFL-----YKTAGG 102

Query: 89  RKWYFGGT-QQSPNLWVNED------DPQRRKWYFGGTQQSPNLWVNED 130
             ++ G T       W   D          R W  G   +  N   NE 
Sbjct: 103 LIYWIGLTKAGMEGDWSWVDDTPFNKVQSARFWIPG---EPNNAGNNEH 148

>2e3x_C Coagulation factor X-activating enzyme light CHAI; disintegrin, metalloproteinase, C-type lectin, hydrolase, BL clotting, toxin; HET: NAG MAN GM6; 2.91A {Daboia russellii siamensis} Length = 122

 Score = 56.6 bits (137), Expect = 3e-10
 Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 4/75 (5%)

Query: 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLD--SDLANVNDADEHGFIMYQLFWQ 84
          L CP  W+ Y   CY+      K   DA+  C      S L +++  +E  F+   L  +
Sbjct: 1  LDCPSGWLSYEQHCYKGFNDL-KNWTDAEKFCTEQKKGSHLVSLHSREEEKFV-VNLISE 58

Query: 85 DPQRRKWYFGGTQQS 99
          + +    + G     
Sbjct: 59 NLEYPATWIGLGNMW 73

>1pwb_A SP-D, PSP-D, pulmonary surfactant-associated protein D; collectin, C-type lectin, alpha-helical coiled coil, carbohydrate recognition domain; HET: GLC; 1.40A {Homo sapiens} SCOP: d.169.1.1 h.1.1.1 PDB: 1pw9_A* 3ikn_A* 3ikp_A* 3ikq_A* 3ikr_A* 2rie_A* 2ggx_A* 2ggu_A* 2ork_A* 2orj_A* 2ria_A* 2rib_A* 2ric_A* 2rid_A* 2os9_A* 3dbz_A 3g81_A* 3g83_A* 1b08_A 3g84_A* ... Length = 177

 Score = 58.2 bits (141), Expect = 3e-10
 Identities = 9/84 (10%), Positives = 26/84 (30%), Gaps = 5/84 (5%)

Query: 26  ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQD 85
           ++    +     +  ++      K   +A+L C      LA+   A E+  +   +    
Sbjct: 52  KVELFPNGQSVGEKIFKTAGFV-KPFTEAQLLCTQAGGQLASPRSAAENAALQQLV---V 107

Query: 86  PQRRKWYFGGT-QQSPNLWVNEDD 108
            +    +   T  ++   +     
Sbjct: 108 AKNEAAFLSMTDSKTEGKFTYPTG 131

>1egg_A Macrophage mannose receptor; C-type lectin, sugar binding protein; 2.30A {Homo sapiens} SCOP: d.169.1.1 PDB: 1egi_A Length = 147

 Score = 57.4 bits (139), Expect = 4e-10
 Identities = 21/111 (18%), Positives = 43/111 (38%), Gaps = 11/111 (9%)

Query: 28  RCPQHWV--QYRDSCYRFVKSPLKTR---NDAKLNCKSLDSDLANVNDADEHGFIMYQLF 82
           +CP+ W        C++        +    +++  C++L  DLA++N+ +E   I   + 
Sbjct: 4   KCPEDWGASSRTSLCFKLYAKGKHEKKTWFESRDFCRALGGDLASINNKEEQQTIWRLIT 63

Query: 83  WQDPQRRKWYFGGTQQSPN---LWVNEDDPQRRKWYFGGTQQSPNLWVNED 130
                 + ++ G T  SP+    W +        W +G   +  N    E 
Sbjct: 64  ASGSYHKLFWLGLTYGSPSEGFTWSDGSPVSYENWAYG---EPNNYQNVEY 111

>1jwi_B Platelet aggregation inducer; domain swapping, C-type lectin, toxin; 2.00A {Bitis arietans} SCOP: d.169.1.1 PDB: 1uex_B Length = 125

 Score = 56.7 bits (137), Expect = 4e-10
 Identities = 21/76 (27%), Positives = 29/76 (38%), Gaps = 4/76 (5%)

Query: 26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLD--SDLANVNDADEHGFIMYQLFW 83
          +  C   W  Y+  CY+  K   KT  DA+  CK L     L +VN  +E  FI      
Sbjct: 1  DEGCLPDWSSYKGHCYKVFKVE-KTWADAEKFCKELVNGGHLMSVNSREEGEFISKLALE 59

Query: 84 QDPQRRKWYFGGTQQS 99
          +      W  G +   
Sbjct: 60 KMRIVLVW-IGLSHFW 74

>3bx4_B Aggretin beta chain; toxin; 1.70A {Agkistrodon rhodostoma} PDB: 2vrp_B Length = 146

 Score = 57.0 bits (138), Expect = 4e-10
 Identities = 25/86 (29%), Positives = 34/86 (39%), Gaps = 4/86 (4%)

Query: 9  FIFVSFHS-VFSQTIDELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLD--SDL 65
          FIFVSF   V   ++      CP  W  Y   CY+    P K   DA+  CK     S L
Sbjct: 4  FIFVSFGLLVVFLSLSGTGADCPSGWSSYEGHCYKPFNEP-KNWADAERFCKLQPKHSHL 62

Query: 66 ANVNDADEHGFIMYQLFWQDPQRRKW 91
           +   A+E  F++     +      W
Sbjct: 63 VSFQSAEEADFVVKLTRPRLKANLVW 88

>1wmz_A Lectin CEL-I, N-acetyl-D-galactosamine-specific C-type; C-type lectin, N-acetylgalactosamine, invertebrate, sugar binding protein; HET: NGA A2G; 1.70A {Cucumaria echinata} SCOP: d.169.1.1 PDB: 1wmy_A* Length = 140

 Score = 56.7 bits (137), Expect = 4e-10
 Identities = 29/113 (25%), Positives = 41/113 (36%), Gaps = 14/113 (12%)

Query: 28  RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLD-------SDLANVNDADEHGFIMYQ 80
           +CP  W    D CYRF  +   T  +A   C S         SDL +V+ A E  ++   
Sbjct: 2   QCPTDWEAEGDHCYRFFNTL-TTWENAHHECVSYSCSTLNVRSDLVSVHSAAEQAYVFNY 60

Query: 81  LFWQDPQRRKWYFGGTQQSPN---LWVNEDDPQRRKWYFGGTQQSPNLWVNED 130
               D Q  + + G   +      +W +       KW  G   Q  N    ED
Sbjct: 61  WRGIDSQAGQLWIGLYDKYNEGDFIWTDGSKVGYTKWAGG---QPDNWNNAED 110

>2kv3_A Regenerating islet-derived protein 4; GISP, C-type lectin, REG IV, disulfide bond, glycoPro lectin, secreted, sugar binding protein; NMR {Homo sapiens} Length = 131

 Score = 56.3 bits (136), Expect = 5e-10
 Identities = 21/109 (19%), Positives = 39/109 (35%), Gaps = 26/109 (23%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLD--SDLANVNDADEHGFIMYQLFWQDP 86
           C   W  ++ +CY + +   +  +DA+L C+S    + LA++    E   I   +     
Sbjct: 3   CAPGWFYHKSNCYGYFRKL-RNWSDAELECQSYGNGAHLASILSLKEASTIAEYISGYQR 61

Query: 87  QRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLN 135
            +  W  G            D  +R++W           W+  DG    
Sbjct: 62  SQSIW-IGLH----------DPQKRQQW----------QWI--DGAMYL 87

>3ubu_B Agglucetin subunit beta-2; platelet inhibiting, agkisacucetin, dimer, toxin, C-type LEC GPIB inhibitor, GPIB binding; 1.91A {Deinagkistrodon acutus} Length = 126

 Score = 55.5 bits (134), Expect = 8e-10
 Identities = 20/82 (24%), Positives = 32/82 (39%), Gaps = 5/82 (6%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNC--KSLDSDLANVNDADEHGFIMYQLFWQDP 86
           CP  W  Y   CY  VK   KT +DA+  C  +     L +V+  +E  F+++  +    
Sbjct: 4   CPLRWSAYEGHCYLVVKEK-KTWDDAEKFCTEQRKGGHLVSVHSREEADFLVHLAYPILD 62

Query: 87  QRRKWYFGGT-QQSPNLWVNED 107
               W  G +   +       D
Sbjct: 63  LSLIW-MGLSNMWNDCKREWSD 83

>3c8j_A Natural killer cell receptor LY49C; MHC, virus, immune system; 2.60A {Mus musculus} SCOP: d.169.1.1 PDB: 3c8k_D 1p4l_D 1ja3_A 1p1z_D Length = 203

 Score = 57.6 bits (139), Expect = 9e-10
 Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 5/60 (8%)

Query: 28  RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQL----FW 83
           R  ++W  Y   CY F+ +   T +  K NC+     +  + D DE  F+   +    +W
Sbjct: 79  RGVKYWFCYSTKCYYFIMNK-TTWSGCKANCQHYGVPILKIEDEDELKFLQRHVIPGNYW 137

>1sb2_B Rhodocetin beta subunit; C-type lectin, domain swapping, toxin; 1.90A {Calloselasma rhodostoma} SCOP: d.169.1.1 PDB: 3gpr_B Length = 129

 Score = 55.5 bits (134), Expect = 9e-10
 Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 4/70 (5%)

Query: 26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFW 83
          + RCP  W   +  CY+  K   KT  +A+  C     +  L ++  A E  F+   +  
Sbjct: 1  DFRCPTTWSASKLYCYKPFKEK-KTWIEAERFCAKQAENGHLVSIGSAAEADFL-DLVIV 58

Query: 84 QDPQRRKWYF 93
           +  ++++  
Sbjct: 59 VNFDKQRYRA 68

>1gz2_A Ovocleidin-17, OC-17 ovocleidin; structural protein, CTLD, eggshell structural protein, phosphoprotein, sugar-binding protein, glycoprotein; HET: SEP; 1.5A {Gallus gallus} SCOP: d.169.1.1 Length = 142

 Score = 55.6 bits (134), Expect = 1e-09
 Identities = 22/110 (20%), Positives = 28/110 (25%), Gaps = 20/110 (18%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSL--DSDLANVNDADEHGFIMYQLFWQDP 86
           C   WV     C  F      + + A+  C+     S LA V  A E   +   L     
Sbjct: 5   CGPGWVPTPGGCLGFFSRE-LSWSRAESFCRRWGPGSHLAAVRSAAELRLLAELLN---- 59

Query: 87  QRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGT-QQSPNLWVNEDGTNLN 135
             R     G      +W             G         W   DGT   
Sbjct: 60  ASRGGDGSGEGADGRVW------------IGLHRPAGSRSWRWSDGTAPR 97

>1umr_C Convulxin beta, CVX beta; lectin, C-type lectin, platelet, sugar-binding protein, activator, snake venom; 2.40A {Crotalus durissus terrificus} SCOP: d.169.1.1 PDB: 1uos_B Length = 125

 Score = 55.1 bits (133), Expect = 1e-09
 Identities = 17/65 (26%), Positives = 24/65 (36%), Gaps = 3/65 (4%)

Query: 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDP 86
          CP HW  Y   CY+  K    T  DA+  C      S L + +  +E  F++        
Sbjct: 4  CPSHWSSYDRYCYKVFKQE-MTWADAEKFCTQQHTGSHLVSFHSTEEVDFVVKMTHQSLK 62

Query: 87 QRRKW 91
              W
Sbjct: 63 STFFW 67

>3g8l_A Lectin-related NK cell receptor LY49L1; natural killer cell receptor, immune system; 2.50A {Mus musculus} Length = 190

 Score = 56.8 bits (137), Expect = 1e-09
 Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 5/59 (8%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQL----FW 83
             ++W  Y   CY FV    KT +  K  C+     L  +++ DE  F+   +    +W
Sbjct: 67  FEKYWFCYGIKCYYFVMDR-KTWSGCKQTCQISSLSLLKIDNEDELKFLKLLVPSDSYW 124

>3gpr_D Rhodocetin subunit delta; disulfide bond, lectin, secreted, toxin, cell adhesion; 3.20A {Calloselasma rhodostoma} Length = 124

 Score = 54.8 bits (132), Expect = 1e-09
 Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 3/65 (4%)

Query: 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLD--SDLANVNDADEHGFIMYQLFWQDP 86
          CP HW  Y   CYR      KT  DA+  C +    S LA+++  +E  F+         
Sbjct: 1  CPLHWSSYNGYCYRVFSEL-KTWEDAESFCYAQHKGSRLASIHSREEEAFVGKLASQTLK 59

Query: 87 QRRKW 91
              W
Sbjct: 60 YTSMW 64

>3pbf_A Pulmonary surfactant-associated protein A; collectin, carbohydrate binding, lectin, mannose, sugar BIND protein; 1.80A {Rattus norvegicus} PDB: 1r14_A* 1r13_A* 3paq_A* 3par_A 3pak_A Length = 148

 Score = 55.5 bits (134), Expect = 2e-09
 Identities = 12/82 (14%), Positives = 21/82 (25%), Gaps = 5/82 (6%)

Query: 27  LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDP 86
           L      +   D  +          +  K  C     ++A     +E+  I         
Sbjct: 25  LSLQGSMLSVGDKVFSTNGQS-VNFDTIKEMCTRAGGNIAVPRTPEENEAIASIA---KK 80

Query: 87  QRRKWYFGGT-QQSPNLWVNED 107
                Y G    Q+P  +   D
Sbjct: 81  YNNYVYLGMIEDQTPGDFHYLD 102

>1oz7_A Echicetin A-chain; platelet aggregation, dimer, toxin; 2.40A {Echis carinatus} SCOP: d.169.1.1 Length = 131

 Score = 54.8 bits (132), Expect = 2e-09
 Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 3/75 (4%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSL--DSDLANVNDADEHGFIMYQLFWQDP 86
           CP  W      CY   K P KT ++A+  C     D  L ++    E   +   +     
Sbjct: 2   CPPGWSSNGVYCYMLFKEP-KTWDEAEKFCNKQGKDGHLLSIESKKEEILVDIVVSENIG 60

Query: 87  QRRKWYFGGTQQSPN 101
           +  K + G +++S  
Sbjct: 61  KMYKIWTGLSERSKE 75

>1c3a_B Flavocetin-A: beta subunit; C-type lectin-like domains, membrane protein; 2.50A {Trimeresurus flavoviridis} SCOP: d.169.1.1 PDB: 1v4l_B Length = 125

 Score = 54.3 bits (131), Expect = 2e-09
 Identities = 21/109 (19%), Positives = 34/109 (31%), Gaps = 26/109 (23%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLD--SDLANVNDADEHGFIMYQLFWQDP 86
           CP  W  Y + CY+  +       DA+  C      S L + + ++E  F+  + F    
Sbjct: 4   CPLGWSSYDEHCYQVFQQK-MNWEDAEKFCTQQHKGSHLVSFHSSEEVDFVTSKTFPILK 62

Query: 87  QRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLN 135
               W  G +          +                  W   DGT L+
Sbjct: 63  YDFVW-IGLS----------NVWNECTK----------EWS--DGTKLD 88

>1j34_B Coagulation factor IX-binding protein B chain; magnesium ION, calcium ION, GLA domain, protein binding/blood clotting complex; HET: CGU; 1.55A {Trimeresurus flavoviridis} SCOP: d.169.1.1 PDB: 1bj3_B 1ixx_B* 1j35_B* 1x2t_B* 1x2w_B 1wt9_B 1iod_B 1y17_B Length = 123

 Score = 54.3 bits (131), Expect = 2e-09
 Identities = 16/65 (24%), Positives = 24/65 (36%), Gaps = 3/65 (4%)

Query: 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDS--DLANVNDADEHGFIMYQLFWQDP 86
          CP  W  Y   CY+    P K   DA+  C    +   L +   ++E  F++   F    
Sbjct: 2  CPSDWSSYEGHCYKPFSEP-KNWADAENFCTQQHAGGHLVSFQSSEEADFVVKLAFQTFG 60

Query: 87 QRRKW 91
              W
Sbjct: 61 HSIFW 65

>1oz7_B Echicetin B-chain; platelet aggregation, dimer, toxin; 2.40A {Echis carinatus} SCOP: d.169.1.1 Length = 123

 Score = 54.3 bits (131), Expect = 2e-09
 Identities = 18/78 (23%), Positives = 25/78 (32%), Gaps = 5/78 (6%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCK--SLDSDLANVNDADEHGFIMYQLFWQDP 86
           C   W  Y   CY+  K       DA+  C     D  L +  ++ E  F++   F    
Sbjct: 2   CLPDWSVYEGYCYKVFKER-MNWADAEKFCTKQHKDGHLVSFRNSKEVDFVISLAFPMLK 60

Query: 87  QRRKWYFGGT-QQSPNLW 103
               W  G T       W
Sbjct: 61  NDLVW-IGLTDYWRDCNW 77

>1jzn_A Galactose-specific lectin; C-type lectin, protein-disaccharide complex, sugar binding P; HET: BGC GAL; 2.20A {Crotalus atrox} SCOP: d.169.1.1 PDB: 1muq_A* Length = 135

 Score = 54.3 bits (131), Expect = 3e-09
 Identities = 19/107 (17%), Positives = 33/107 (30%), Gaps = 9/107 (8%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDS--DLANVNDADEHGFIMYQLFWQDP 86
           CP  W+     CY+      KT  DA++ C+       LA+ +   E   I   +     
Sbjct: 3   CPLDWLPMNGLCYKIFNQL-KTWEDAEMFCRKYKPGCHLASFHRYGESLEIAEYISDYHK 61

Query: 87  QRRKWYFGGTQQSPN---LWVNEDDPQRRKWYFGGTQQSPNLWVNED 130
            +   + G   +  +    W +        W      Q  +    E 
Sbjct: 62  GQENVWIGLRDKKKDFSWEWTDRSCTDYLTWDKN---QPDHYQNKEF 105

>1ukm_B EMS16 B chain, EMS16 subunit B; domain swapping, C-type lectin, toxin; HET: NAG; 1.90A {Echis multisquamatus} SCOP: d.169.1.1 PDB: 1v7p_B* Length = 128

 Score = 54.0 bits (130), Expect = 3e-09
 Identities = 14/65 (21%), Positives = 25/65 (38%), Gaps = 3/65 (4%)

Query: 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLD--SDLANVNDADEHGFIMYQLFWQDP 86
          CP  W  +   CY+  +   K   +A+  C      S LA+++ ++E  F+         
Sbjct: 1  CPLGWSSFDQHCYKVFEPV-KNWTEAEEICMQQHKGSRLASIHSSEEEAFVSKLASKALK 59

Query: 87 QRRKW 91
              W
Sbjct: 60 FTSMW 64

>1c3a_A Flavocetin-A: alpha subunit; C-type lectin-like domains, membrane protein; 2.50A {Trimeresurus flavoviridis} SCOP: d.169.1.1 PDB: 1v4l_A Length = 135

 Score = 54.0 bits (130), Expect = 3e-09
 Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 3/51 (5%)

Query: 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLD--SDLANVNDADEHGFI 77
          C   W  Y   CY+    P K   DA+  C+     S L ++  + E  F+
Sbjct: 4  CIPGWSAYDRYCYQAFSKP-KNWEDAESFCEEGVKTSHLVSIESSGEGDFV 53

>1ukm_A EMS16 A chain, EMS16 subunit A; domain swapping, C-type lectin, toxin; HET: NAG; 1.90A {Echis multisquamatus} SCOP: d.169.1.1 PDB: 1v7p_A* Length = 134

 Score = 54.0 bits (130), Expect = 4e-09
 Identities = 22/111 (19%), Positives = 36/111 (32%), Gaps = 26/111 (23%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSL--DSDLANVNDADEHGFIMYQLFWQDP 86
           CP  W  Y   CY  +  P +   +A+  C     D  L ++   +E  F+  QL     
Sbjct: 4   CPSDWTAYDQHCYLAIGEP-QNWYEAERFCTEQAKDGHLVSIQSREEGNFV-AQLVSGFM 61

Query: 87  QRRKWYF--GGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLN 135
            R + Y   G            D  + ++            W   DG+ + 
Sbjct: 62  HRSEIYVWIGLR----------DRREEQQCNP--------EWN--DGSKII 92

>1uv0_A Pancreatitis-associated protein 1; lectin, C-type, secreted, inflammatory response, acute phase; 1.78A {Homo sapiens} SCOP: d.169.1.1 PDB: 2go0_A Length = 149

 Score = 54.4 bits (131), Expect = 4e-09
 Identities = 22/120 (18%), Positives = 37/120 (30%), Gaps = 14/120 (11%)

Query: 20  QTIDELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDS-DLANVNDADEHGFIM 78
           + +    +RCP+    Y   CY    SP K+  DA L C+   S +L +V    E  F+ 
Sbjct: 5   RELPSARIRCPKGSKAYGSHCYALFLSP-KSWTDADLACQKRPSGNLVSVLSGAEGSFVS 63

Query: 79  YQLFWQDPQRRKWYFGGTQQSPN--------LWVNEDDPQRRKWYFGGTQQSPNLWVNED 130
             +          + G    +           W + D      W     +    +     
Sbjct: 64  SLVKSIGNSYSYVWIGLHDPTQGTEPNGEGWEWSSSDVMNYFAWE----RNPSTISSPGH 119

>1umr_A Convulxin alpha, CVX alpha; lectin, C-type lectin, platelet, sugar-binding protein, activator, snake venom; 2.40A {Crotalus durissus terrificus} SCOP: d.169.1.1 PDB: 1uos_A Length = 135

 Score = 53.6 bits (129), Expect = 5e-09
 Identities = 16/69 (23%), Positives = 25/69 (36%), Gaps = 4/69 (5%)

Query: 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSL--DSDLANVNDADEHGFIMYQLFWQ 84
          L CP  W  Y   CYR          DA+  C      + L ++  A E  F+   +  Q
Sbjct: 2  LHCPSDWYYYDQHCYRIFNEE-MNWEDAEWFCTKQAKGAHLVSIKSAKEADFV-AWMVTQ 59

Query: 85 DPQRRKWYF 93
          + +    + 
Sbjct: 60 NIEESFSHV 68

>3gpr_C Rhodocetin subunit gamma; disulfide bond, lectin, secreted, toxin, cell adhesion; 3.20A {Calloselasma rhodostoma} Length = 134

 Score = 53.6 bits (129), Expect = 5e-09
 Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 4/69 (5%)

Query: 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCK--SLDSDLANVNDADEHGFIMYQLFWQ 84
            C   W  Y   CY+    P KT ++A+  C   +    L ++    E  F+  QL   
Sbjct: 1  FNCLPGWSAYDQHCYQAFNEP-KTWDEAERFCTEQAKRGHLVSIGSDGEADFV-AQLVTN 58

Query: 85 DPQRRKWYF 93
          + +R + Y 
Sbjct: 59 NIKRPELYV 67

>3bx4_A Aggretin alpha chain; toxin; 1.70A {Agkistrodon rhodostoma} PDB: 2vrp_A Length = 136

 Score = 53.2 bits (128), Expect = 6e-09
 Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 3/67 (4%)

Query: 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLD--SDLANVNDADEHGFIMYQLFWQDP 86
          C   W  Y   CY+      KT ++A+  C++ +  + LA++    E  F+ + +  +D 
Sbjct: 5  CDFGWSPYDQHCYQAFNEQ-KTWDEAEKFCRAQENGAHLASIESNGEADFVSWLISQKDE 63

Query: 87 QRRKWYF 93
             + Y 
Sbjct: 64 LADEDYV 70

>2e3x_B Coagulation factor X-activating enzyme light CHAI; disintegrin, metalloproteinase, C-type lectin, hydrolase, BL clotting, toxin; HET: NAG MAN GM6; 2.91A {Daboia russellii siamensis} Length = 134

 Score = 53.2 bits (128), Expect = 8e-09
 Identities = 18/69 (26%), Positives = 27/69 (39%), Gaps = 4/69 (5%)

Query: 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSL--DSDLANVNDADEHGFIMYQLFWQ 84
          L CP     YR  CYR  K   KT   A+  C     +  L ++   +E  F+  +L   
Sbjct: 1  LDCPPDSSLYRYFCYRVFKEH-KTWEAAERFCMEHPNNGHLVSIESMEEAEFV-AKLLSN 58

Query: 85 DPQRRKWYF 93
             +   +F
Sbjct: 59 TTGKFITHF 67

>1sb2_A Rhodocetin alpha subunit; C-type lectin, domain swapping, toxin; 1.90A {Calloselasma rhodostoma} SCOP: d.169.1.1 PDB: 3gpr_A Length = 133

 Score = 52.5 bits (126), Expect = 1e-08
 Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 4/67 (5%)

Query: 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLD--SDLANVNDADEHGFIMYQLFWQDP 86
          CP  W   +  CYR  K   KT  +A+  C   +  + L ++ +  E  F+   +   + 
Sbjct: 2  CPDGWSSTKSYCYRPFKEK-KTWEEAERFCTEQEKEAHLVSMENRLEAVFV-DMVMENNF 59

Query: 87 QRRKWYF 93
          + + +  
Sbjct: 60 ENKIYRS 66

>2kq2_A Ribonuclease H-related protein; PSI, NESG, protein structure, APO enzyme, structural genomics, protein structure initiative; NMR {Desulfitobacterium hafniense dcb-2} PDB: 2kw4_A Length = 147

 Score = 52.7 bits (127), Expect = 1e-08
 Identities = 19/91 (20%), Positives = 33/91 (36%), Gaps = 3/91 (3%)

Query: 255 FTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGIDNIQQRNNIIQLIKQEYYFASTNG 314
              E  A  Y +KK S + +K   I  D   +        +  N  +  +      +   
Sbjct: 51  VAGEIAAALYAVKKASQLGVK-IRILHDYAGIAFWATGEWKAKN--EFTQAYAKLMNQYR 107

Query: 315 SQISFMWIPSHSNIALNDKADQLAKNSINSK 345
              SF  + +HS    ND  D  AK+++  +
Sbjct: 108 GIYSFEKVKAHSGNEFNDYVDMKAKSALGIR 138

>1j34_A Coagulation factor IX-binding protein A chain; magnesium ION, calcium ION, GLA domain, protein binding/blood clotting complex; HET: CGU; 1.55A {Trimeresurus flavoviridis} SCOP: d.169.1.1 PDB: 1bj3_A* 1j35_A* 1x2t_A* 1x2w_A 1ixx_A 1y17_A 1wt9_A 1iod_A* Length = 129

 Score = 52.0 bits (125), Expect = 2e-08
 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 4/67 (5%)

Query: 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCK--SLDSDLANVNDADEHGFIMYQLFWQDP 86
          CP  W  Y   CY+  K   KT +DA+  C   +    L ++  A E  F+  QL  ++ 
Sbjct: 2  CPSGWSSYEGHCYKPFKLY-KTWDDAERFCTEQAKGGHLVSIESAGEADFV-AQLVTENI 59

Query: 87 QRRKWYF 93
          Q  K Y 
Sbjct: 60 QNTKSYV 66

>3alu_A Lectin CEL-IV, C-type; C-type lectin, raffinose, sugar binding protein; HET: RAF; 1.65A {Cucumaria echinata} PDB: 3als_A* 3alt_A* Length = 157

 Score = 52.2 bits (125), Expect = 2e-08
 Identities = 16/119 (13%), Positives = 38/119 (31%), Gaps = 30/119 (25%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSL-----------DSDLANVNDADEHGFI 77
           CP  W  +   C+R   +     ++A+  C+                LA+++ A+   F+
Sbjct: 5   CPPLWTGFNGKCFRLFHNH-LNFDNAENACRQFGLASCSGDELATGHLASIHSAESQAFL 63

Query: 78  MYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGT-QQSPNLWVNEDGTNLN 135
              +    P            +P ++             G     + +     DG++++
Sbjct: 64  TELVKTSLPD-----LITGGWAPQVY------------IGMKVGSTNSDQTWTDGSSVD 105

>1fvu_A Botrocetin alpha chain; VON WILLBRAND factor modulator, C-type lectin, metal- binding, loop exchanged dimer, toxin; 1.80A {Bothrops jararaca} SCOP: d.169.1.1 PDB: 1ijk_B 1u0n_B 1u0o_A Length = 133

 Score = 50.5 bits (121), Expect = 6e-08
 Identities = 14/67 (20%), Positives = 24/67 (35%), Gaps = 3/67 (4%)

Query: 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDP 86
          CP  W  Y  +CY+F +       DA+  C        L ++    +    +  L  ++ 
Sbjct: 2  CPSGWSSYEGNCYKFFQQK-MNWADAERFCSEQAKGGHLVSIKIYSKEKDFVGDLVTKNI 60

Query: 87 QRRKWYF 93
          Q    Y 
Sbjct: 61 QSSDLYA 67

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 53.3 bits (127), Expect = 1e-07
 Identities = 88/580 (15%), Positives = 166/580 (28%), Gaps = 172/580 (29%)

Query: 25  LELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIM------ 78
           ++    +H  QY+D    F  + +        +CK +     ++   +E   I+      
Sbjct: 7   MDFETGEHQYQYKDILSVFEDAFVD-----NFDCKDVQDMPKSILSKEEIDHIIMSKDAV 61

Query: 79  ---YQLFW---QDPQRRKWYFGGTQQSPNL-WVNE------DDPQR-RKWY-------FG 117
               +LFW      +     F       N  ++          P    + Y       + 
Sbjct: 62  SGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYN 121

Query: 118 GTQQSPNLWVN--EDGTNLNELDAAFLPEPADNVQ--------RDYLAYSFSQSLKR--- 164
             Q      V+  +    L +  A     PA NV         + ++A     S K    
Sbjct: 122 DNQVFAKYNVSRLQPYLKLRQ--ALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCK 179

Query: 165 ------W-GFERVTGMEPLLFICEASIQKLHYLL------NDDRTYQYGMDIENPDKIPR 211
                 W   +     E +L +    +QKL Y +        D +    + I +     R
Sbjct: 180 MDFKIFWLNLKNCNSPETVLEM----LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELR 235

Query: 212 GPYFIKQPT---------DV-------VFDLS-K-----RNSNTGFAFIINNENFQYRLP 249
               +K            +V        F+LS K     R       F+         L 
Sbjct: 236 --RLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQV-TDFLSAATTTHISLD 292

Query: 250 HEASIFT-AEAIAIFYCIKKISDMKIKK-------------AIIFSDNKSVLNGIDNIQQ 295
           H +   T  E  ++     K  D + +              +II    +  L   DN + 
Sbjct: 293 HHSMTLTPDEVKSLL---LKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKH 349

Query: 296 RN-----NIIQL--------IKQEYYFAST---NGSQI-----SFMWIPSHSNIALNDKA 334
            N      II+           ++ +   +     + I     S +W     +  +    
Sbjct: 350 VNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVV-V 408

Query: 335 DQLAKNS------------INSKLLDFYIQDDLKNHLRKNIVKLYNDQWTNIQNNKLRTI 382
           ++L K S            I S  L+  ++ + +  L ++IV  YN   T   ++ +   
Sbjct: 409 NKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPY 468

Query: 383 KDNTTLWKTS--LRKIRNEE--ILLTRLRIGHTRITHSYL---F--TKTPHPICTCGFPL 433
            D          L+ I + E   L   +          +L   F   K  H         
Sbjct: 469 LDQYFYSHIGHHLKNIEHPERMTLFRMV----------FLDFRFLEQKIRHDSTAWNASG 518

Query: 434 TVKHIF-ECNKYKKFREKLSLPSIEIALSDNENMAEKTIK 472
           ++ +   +   YK +            + DN+   E+ + 
Sbjct: 519 SILNTLQQLKFYKPY------------ICDNDPKYERLVN 546

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.9 bits (100), Expect = 2e-04
 Identities = 40/296 (13%), Positives = 94/296 (31%), Gaps = 67/296 (22%)

Query: 142 LPEPADNV---QRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASIQKLHYLLNDDRTYQ 198
           LP         +   +A S    L  W   +    + L  I E+S+  L     + R   
Sbjct: 318 LPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEP--AEYRKMF 375

Query: 199 YGMDIENPD-KIPRGPYFI---KQPTDVVFDLSKRNSNTGFAFIINNENFQYRLPHEASI 254
             + +  P   IP     +         V  +  +            +     +P     
Sbjct: 376 DRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVE-KQPKESTISIPS---- 430

Query: 255 FTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGIDNIQQRNNIIQLIKQEYYF----- 309
                I +   +K  ++  + ++I+  D+ ++    D+    +++I     +Y++     
Sbjct: 431 -----IYLELKVKLENEYALHRSIV--DHYNIPKTFDS----DDLIPPYLDQYFYSHIGH 479

Query: 310 --ASTNGSQ---------ISFMWIPS---HSNIALNDKADQLAKNSINSKLLDF-----Y 350
              +    +         + F ++     H + A N      A  SI + L        Y
Sbjct: 480 HLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWN------ASGSILNTLQQLKFYKPY 533

Query: 351 IQD----------DLKNHLRKNIVKLYNDQWTNIQNNKLRTIKDNTTLWKTSLRKI 396
           I D           + + L K    L   ++T++    L    ++  +++ + +++
Sbjct: 534 ICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMA--EDEAIFEEAHKQV 587

>1rtm_1 Mannose-binding protein-A; lectin; 1.80A {Rattus norvegicus} SCOP: d.169.1.1 h.1.1.1 PDB: 1kwu_A* 1kwv_A* 1kwt_A* 1kwx_A* 1kwy_A* 1kx1_A* 1kww_A 1kwz_A* 1kx0_A* 3kmb_1* 1kmb_1* 2kmb_1* 4kmb_1* 1afb_1* 1afa_1* 1afd_1 1bch_1* 1bcj_1* 1fif_A 1fih_A* Length = 149

 Score = 49.7 bits (119), Expect = 2e-07
 Identities = 11/83 (13%), Positives = 26/83 (31%), Gaps = 8/83 (9%)

Query: 26  ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQD 85
           +L       +     +          +  K  C  L   +A   +A+E+  I      Q+
Sbjct: 25  KLHAFSMGKKSGKKFFVTNHER-MPFSKVKALCSELRGTVAIPRNAEENKAI------QE 77

Query: 86  PQRRKWYFGGT-QQSPNLWVNED 107
             +   + G T + +   ++   
Sbjct: 78  VAKTSAFLGITDEVTEGQFMYVT 100

>1buu_A Protein (mannose-binding protein A); lectin, HOST defense, metalloprotein, sugar binding protein; 1.90A {Rattus norvegicus} SCOP: d.169.1.1 h.1.1.1 Length = 168

 Score = 49.7 bits (119), Expect = 2e-07
 Identities = 11/83 (13%), Positives = 26/83 (31%), Gaps = 8/83 (9%)

Query: 26  ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQD 85
           +L       +     +          +  K  C  L   +A   +A+E+  I      Q+
Sbjct: 44  KLHAFSMGKKSGKKFFVTNHER-MPFSKVKALCSELRGTVAIPRNAEENKAI------QE 96

Query: 86  PQRRKWYFGGT-QQSPNLWVNED 107
             +   + G T + +   ++   
Sbjct: 97  VAKTSAFLGITDEVTEGQFMYVT 119

>1hup_A Mannose-binding protein; alpha-helical coiled-coil, C-type lectin; 2.50A {Homo sapiens} SCOP: d.169.1.1 h.1.1.1 Length = 141

 Score = 48.9 bits (117), Expect = 3e-07
 Identities = 12/81 (14%), Positives = 27/81 (33%), Gaps = 8/81 (9%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
                 Q  +  +        T    K  C    + +A   +A E+G I   +      +
Sbjct: 20  TFSLGKQVGNKFFLTNGEI-MTFEKVKALCVKFQASVATPRNAAENGAIQNLI------K 72

Query: 89  RKWYFGGT-QQSPNLWVNEDD 108
            + + G T +++   +V+   
Sbjct: 73  EEAFLGITDEKTEGQFVDLTG 93

>1wk1_A Hypothetical protein YK1067A12; lectin C-type domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Caenorhabditis elegans} SCOP: d.169.1.1 Length = 150

 Score = 46.4 bits (110), Expect = 2e-06
 Identities = 12/108 (11%), Positives = 25/108 (23%), Gaps = 20/108 (18%)

Query: 33  WV-QYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKW 91
                             +   A+  C S    LA+    D++ F             ++
Sbjct: 2   SSGSSGVKFLTVNDDI-LSMPQARNFCASAGGYLADDLGDDKNNFYSSIA-----ANTQF 55

Query: 92  YFGGTQQSPNLWVNED---------DPQRRKWYFGGTQQSPNLWVNED 130
           + G  + S   +  +          +     W  G     P+      
Sbjct: 56  WIGLFKNSDGQFYWDRGQGINPDLLNQPITYWANG----EPSNDPTRQ 99

>3p1g_A Xenotropic murine leukemia virus-related virus (X H domain; XMRV, RNAse H, reverse transcriptase, transcription; 1.50A {Xenotropic mulv-related virus} PDB: 3v1q_A 3v1o_A 3v1r_A* 2hb5_A Length = 165

 Score = 43.7 bits (103), Expect = 3e-05
 Identities = 23/134 (17%), Positives = 42/134 (31%), Gaps = 17/134 (12%)

Query: 227 SKRNSNTGFAFII----NNENFQYRLPHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSD 282
           S        A           +   LP   S   AE IA+    + +   + KK  +++D
Sbjct: 32  SFLQEGQRRAGAAVTTETEVIWARALPAGTSAQRAELIAL---TQALKMAEGKKLNVYTD 88

Query: 283 NKSVLNGIDNIQQRNN---IIQLIKQEYYFASTNGSQISFMWIPSHS-----NIALNDKA 334
           ++       ++            I      A     ++S +  P H          N  A
Sbjct: 89  SRYAF-ATAHVHSEGREIKNKNEILALLK-ALFLPKRLSIIHCPGHQKGNSAEARGNRMA 146

Query: 335 DQLAKNSINSKLLD 348
           DQ A+ +    +L+
Sbjct: 147 DQAAREAAMKAVLE 160

>2qkb_A Ribonuclease H1, HS-RNAse HC, RNAse H1; RNA/DNA hybrid; 2.40A {Homo sapiens} PDB: 2qk9_A 2qkk_A* Length = 154

 Score = 42.9 bits (102), Expect = 4e-05
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 23/104 (22%)

Query: 257 AEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGIDN-IQ--QRNN--------------I 299
           AE  A    I++     I K ++++++   +NGI N +Q  ++N                
Sbjct: 53  AEIHAACKAIEQAKTQNINKLVLYTNSMFTINGITNWVQGWKKNGWKTSAGKEVINKEDF 112

Query: 300 IQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAKNSIN 343
           + L +       T G  I +M +P HS    N++AD+LA+    
Sbjct: 113 VALERL------TQGMDIQWMHVPGHSGFIGNEEADRLAREGAK 150

>1byf_A TC14, protein (polyandrocarpa lectin); C-type lectin, galactose-specific, sugar binding protein; 2.00A {Polyandrocarpa misakiensis} SCOP: d.169.1.1 PDB: 1tlg_A* Length = 125

 Score = 42.0 bits (99), Expect = 4e-05
 Identities = 18/99 (18%), Positives = 24/99 (24%), Gaps = 23/99 (23%)

Query: 38  DSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQ 97
           D    F         DA   C+S    L +    D         F +      W  G   
Sbjct: 2   DYEILFSDET-MNYADAGTYCQSRGMALVSSAMRDSTMVKAILAFTEVKGHDYW-VGAD- 58

Query: 98  QSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNE 136
                     + Q   + F        LW   DG +L  
Sbjct: 59  ----------NLQDGAYNF--------LWN--DGVSLPT 77

>2msb_A Mannose-binding protein-A; lectin; HET: BMA MAN; 1.70A {Rattus rattus} SCOP: d.169.1.1 PDB: 1msb_A 1ytt_A* Length = 115

 Score = 41.5 bits (98), Expect = 6e-05
 Identities = 10/71 (14%), Positives = 23/71 (32%), Gaps = 8/71 (11%)

Query: 38  DSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGT- 96
              +          +  K  C  L   +A   +A+E+  I      Q+  +   + G T 
Sbjct: 3   KKFFVTNHER-MPFSKVKALCSELRGTVAIPRNAEENKAI------QEVAKTSAFLGITD 55

Query: 97  QQSPNLWVNED 107
           + +   ++   
Sbjct: 56  EVTEGQFMYVT 66

>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens} Length = 164

 Score = 41.7 bits (98), Expect = 1e-04
 Identities = 18/93 (19%), Positives = 31/93 (33%), Gaps = 7/93 (7%)

Query: 40  CYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGT-QQ 98
            Y + + P      A+  C+   +DL  + +  E  ++   L     +   W  G     
Sbjct: 2   TYHYSEKP-MNWQRARRFCRDNYTDLVAIQNKAEIEYLEKTL--PFSRSYYW-IGIRKIG 57

Query: 99  SPNLWVNEDDPQRRKWYFGGTQQSPNLWVN-ED 130
               WV  +     +    G  + PN   N ED
Sbjct: 58  GIWTWVGTNKSLTEEAENWGDGE-PNNKKNKED 89

>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A Length = 157

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 12/71 (16%), Positives = 25/71 (35%), Gaps = 11/71 (15%)

Query: 40  CYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQL------FW---QDPQRRK 90
            Y        T ++A   C+   + L  + + +E  ++   L      +W   +      
Sbjct: 2   SYNTSTEA-MTYDEASAYCQQRYTHLVAIQNKEEIEYLNSILSYSPSYYWIGIRK-VNNV 59

Query: 91  WYFGGTQQSPN 101
           W + GTQ+   
Sbjct: 60  WVWVGTQKPLT 70

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A Length = 162

 Score = 40.5 bits (95), Expect = 2e-04
 Identities = 7/42 (16%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 40 CYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQL 81
           Y +      + N ++  C++  +DL  + + +E  ++   L
Sbjct: 2  TYHYSTKA-YSWNISRKYCQNRYTDLVAIQNKNEIDYLNKVL 42

>1rdl_1 SUB-MBP-C, mannose-binding protein-C; C-type lectin, calcium-binding protein; HET: MMA; 1.70A {Rattus rattus} SCOP: d.169.1.1 PDB: 1rdj_1* 1rdk_1* 1rdi_1* 1rdm_1* 1rdn_1* 1rdo_1 1bv4_A 1kza_1* 1kzb_1* 1kzc_1* 1kzd_1* 1kze_1* Length = 113

 Score = 39.2 bits (92), Expect = 4e-04
 Identities = 14/69 (20%), Positives = 27/69 (39%), Gaps = 8/69 (11%)

Query: 40  CYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGT-QQ 98
            +          N AK  C  L   +A   +A+E+  I      Q+  +   + G T Q+
Sbjct: 3   YFMSSVRR-MPLNRAKALCSELQGTVATPRNAEENRAI------QNVAKDVAFLGITDQR 55

Query: 99  SPNLWVNED 107
           + N++ +  
Sbjct: 56  TENVFEDLT 64

>1jl1_A Ribonuclease HI; RNAse HI, protein stability, thermostability, hydrogen exchange, cooperativity, hydrolase; 1.30A {Escherichia coli} SCOP: c.55.3.1 PDB: 1f21_A 1jxb_A 1g15_A 1rch_A 1rdd_A 1rnh_A* 2rn2_A 1rda_A 1law_A 1rdb_A 1lav_A 3aa4_A 1rbu_A 1gob_A 1rdc_A 1kvc_A 3aa3_A 3aa2_A 3aa5_X 1rbv_A ... Length = 155

 Score = 39.8 bits (94), Expect = 4e-04
 Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 23/88 (26%)

Query: 278 IIFSDNKSVLNGI----DNIQQRN----------NI---IQLIKQEYYFASTNGSQISFM 320
           I+ +D++ V  GI     N ++R           N+    +L             QI + 
Sbjct: 66  ILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVDLWQRLDAA------LGQHQIKWE 119

Query: 321 WIPSHSNIALNDKADQLAKNSINSKLLD 348
           W+  H+    N++AD+LA+ +  +  L+
Sbjct: 120 WVKGHAGHPENERADELARAAAMNPTLE 147

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	483
1qdd_A	144	Lithostathine; pancreatic stone inhibitor, metal b	99.93
2py2_A	136	Antifreeze protein type II; type II antifreeze pro	99.93
2kv3_A	131	Regenerating islet-derived protein 4; GISP, C-type	99.92
1uv0_A	149	Pancreatitis-associated protein 1; lectin, C-type,	99.92
1jzn_A	135	Galactose-specific lectin; C-type lectin, protein-	99.92
1gz2_A	142	Ovocleidin-17, OC-17 ovocleidin; structural protei	99.92
3vpp_A	132	C-type lectin domain family 9 member A; dendritic	99.92
3bx4_B	146	Aggretin beta chain; toxin; 1.70A {Agkistrodon rho	99.92
1tn3_A	137	Tetranectin; plasminogen binding, kringle 4, C-typ	99.92
1wmz_A	140	Lectin CEL-I, N-acetyl-D-galactosamine-specific C-	99.92
1c3a_A	135	Flavocetin-A: alpha subunit; C-type lectin-like do	99.92
1ypq_A	135	Oxidised low density lipoprotein (lectin-like) rec	99.92
1jwi_A	131	Bitiscetin; domain swapping, C-type lectin, toxin;	99.92
1egg_A	147	Macrophage mannose receptor; C-type lectin, sugar	99.91
2afp_A	129	Protein (SEA raven type II antifreeze protein); re	99.91
1ukm_A	134	EMS16 A chain, EMS16 subunit A; domain swapping, C	99.91
1umr_A	135	Convulxin alpha, CVX alpha; lectin, C-type lectin,	99.91
2c6u_A	122	CLEC1B protein; lectin, rhodocytin, aggretin, C-ty	99.91
3ubu_A	131	Agglucetin subunit alpha-1; platelet inhibiting, a	99.91
1fvu_A	133	Botrocetin alpha chain; VON WILLBRAND factor modul	99.91
2ox9_A	140	Collectin placenta 1; C-type lectin, sugar binding	99.91
1tdq_B	130	Aggrecan core protein; extracellular matrix, lecti	99.91
1j34_A	129	Coagulation factor IX-binding protein A chain; mag	99.91
2e3x_B	134	Coagulation factor X-activating enzyme light CHAI;	99.91
3bx4_A	136	Aggretin alpha chain; toxin; 1.70A {Agkistrodon rh	99.91
1sb2_A	133	Rhodocetin alpha subunit; C-type lectin, domain sw	99.91
1dv8_A	128	Asialoglycoprotein receptor 1; C-type lectin CRD,	99.91
3c22_A	156	C-type lectin domain family 4 member K; coiled coi	99.91
1oz7_A	131	Echicetin A-chain; platelet aggregation, dimer, to	99.91
1fvu_B	125	Botrocetin beta chain; VON WILLBRAND factor modula	99.91
1sb2_B	129	Rhodocetin beta subunit; C-type lectin, domain swa	99.9
3gpr_D	124	Rhodocetin subunit delta; disulfide bond, lectin,	99.9
2zib_A	133	Type II antifreeze protein; thermal hysteresis, le	99.9
3kqg_A	182	Langerin, C-type lectin domain family 4 member K;	99.9
3gpr_C	134	Rhodocetin subunit gamma; disulfide bond, lectin,	99.9
1htn_A	182	Tetranectin; plasminogen binding, kringle 4, alpha	99.9
3alu_A	157	Lectin CEL-IV, C-type; C-type lectin, raffinose, s	99.9
1ukm_B	128	EMS16 B chain, EMS16 subunit B; domain swapping, C	99.9
3bdw_A	123	Natural killer cells antigen CD94; NK cells, recep	99.9
2bpd_A	142	Dectin-1; receptor, beta-glucan, fungal recognitio	99.9
1jwi_B	125	Platelet aggregation inducer; domain swapping, C-t	99.9
2ls8_A	156	C-type lectin domain family 4 member D; structural	99.83
2vuv_A	129	Codakine; sugar-binding protein, C-type, lectin, m	99.9
2b6b_D	175	CD209 antigen; cryo EM dengue CRD DC-SIGN, icosahe	99.9
3rs1_A	122	C-type lectin domain family 2 member I; C-type lec	99.9
1j34_B	123	Coagulation factor IX-binding protein B chain; mag	99.9
1umr_C	125	Convulxin beta, CVX beta; lectin, C-type lectin, p	99.9
1sl6_A	184	C-type lectin DC-signr; sugar binding protein; HET	99.9
2yhf_A	118	C-type lectin domain family 5 member A; immune sys	99.9
1oz7_B	123	Echicetin B-chain; platelet aggregation, dimer, to	99.9
2e3x_C	122	Coagulation factor X-activating enzyme light CHAI;	99.9
3g8k_A	130	Lectin-related NK cell receptor LY49L1; natural ki	99.89
3ubu_B	126	Agglucetin subunit beta-2; platelet inhibiting, ag	99.89
1c3a_B	125	Flavocetin-A: beta subunit; C-type lectin-like dom	99.89
1hq8_A	123	NKG2-D; homodimer, CIS-proline, apoptosis; 1.95A {	99.89
1mpu_A	138	NKG2-D type II integral membrane protein; C-type l	99.89
2h2t_B	175	Low affinity immunoglobulin epsilon FC receptor (	99.89
1hup_A	141	Mannose-binding protein; alpha-helical coiled-coil	99.89
3bdw_B	120	NKG2-A/NKG2-B type II integral membrane protein; N	99.89
2xr6_A	170	CD209 antigen; sugar binding protein, carbohydrate	99.89
3m9z_A	139	Killer cell lectin-like receptor subfamily B MEMB;	99.89
3hup_A	130	Early activation antigen CD69; C-type lectin-like	99.88
1rtm_1	149	Mannose-binding protein-A; lectin; 1.80A {Rattus n	99.88
2kq2_A	147	Ribonuclease H-related protein; PSI, NESG, protein	99.88
3ff7_C	112	Killer cell lectin-like receptor subfamily G membe	99.88
3ff9_A	115	Killer cell lectin-like receptor subfamily G membe	99.88
1fm5_A	199	Early activation antigen CD69; C-type lectin-like	99.88
3qio_A	150	GAG-POL polyprotein; RNAse H, inhibitor, nuclease,	99.88
2qkb_A	154	Ribonuclease H1, HS-RNAse HC, RNAse H1; RNA/DNA hy	99.88
1buu_A	168	Protein (mannose-binding protein A); lectin, HOST	99.87
3h08_A	146	RNH (ribonuclease H); RNAse H, 3D-structure, endon	99.87
3c8j_A	203	Natural killer cell receptor LY49C; MHC, virus, im	99.87
2msb_A	115	Mannose-binding protein-A; lectin; HET: BMA MAN; 1	99.87
3p1g_A	165	Xenotropic murine leukemia virus-related virus (X	99.86
2e4l_A	158	Ribonuclease HI, RNAse HI; hydrolase, endoribonucl	99.86
1jl1_A	155	Ribonuclease HI; RNAse HI, protein stability, ther	99.86
3g8l_A	190	Lectin-related NK cell receptor LY49L1; natural ki	99.86
1rdl_1	113	SUB-MBP-C, mannose-binding protein-C; C-type lecti	99.85
1wk1_A	150	Hypothetical protein YK1067A12; lectin C-type doma	99.85
1pwb_A	177	SP-D, PSP-D, pulmonary surfactant-associated prote	99.85
1h8u_A	117	MBP, eosinophil granule major basic protein 1; lec	99.85
3pbf_A	148	Pulmonary surfactant-associated protein A; collect	99.84
1byf_A	125	TC14, protein (polyandrocarpa lectin); C-type lect	99.84
1ril_A	166	Ribonuclease H; hydrolase(endoribonuclease); 2.80A	99.83
2lsn_A	165	Reverse transcriptase; RNAse H, viral protein; NMR	99.81
3hst_B	141	Protein RV2228C/MT2287; ribonuclease H1, RV2228C N	99.8
3u3g_D	140	Ribonuclease H, RNAse H1; hydrolase, cleave the RN	99.79
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	99.76
1g1t_A	157	E-selectin; EGF, adhesion molecule, SLEX, immune s	99.76
2ehg_A	149	Ribonuclease HI; RNAse HI, hyperthermophilic archa	99.76
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	99.75
1mu2_A	555	HIV-2 RT; HIV-2 reverse transcriptase, AIDS, polym	99.73
2zd1_A	557	Reverse transcriptase/ribonuclease H; P51/P66, het	99.73
1zbf_A	142	Ribonuclease H-related protein; RNAse H, RNA/DNA h	99.37
4htu_A	134	Ribonuclease H, RNAse H; 5-chloro-2'-deoxyuridine,	99.15
3k7b_A	96	Protein A33; C-type lectin-like domain, homodimer,	98.37
3fd4_A	191	Glycoprotein GP42; C type lectin, virus entry, mem	94.65

>1qdd_A Lithostathine; pancreatic stone inhibitor, metal binding protein; HET: SIA NDG GAL; 1.30A {Homo sapiens} SCOP: d.169.1.1 PDB: 1lit_A

Probab=99.93  E-value=1e-25  Score=196.81  Aligned_cols=131  Identities=18%  Similarity=0.363  Sum_probs=113.9

Q ss_pred             cCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhc-CCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccc
Q psy14885         26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSL-DSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV  104 (483)
Q Consensus        26 ~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~-g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wi  104 (483)
                      ...||+||+.|+++||+++... ++|.+|+..|+.+ ||+|++|+|.+|++||..++.........||||+++..     
T Consensus        11 ~~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~gg~La~i~s~~e~~~l~~~~~~~~~~~~~~WIGl~~~~-----   84 (144)
T 1qdd_A           11 RISCPEGTNAYRSYCYYFNEDR-ETWVDADLYCQNMNSGNLVSVLTQAEGAFVASLIKESGTDDFNVWIGLHDPK-----   84 (144)
T ss_dssp             GTSCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHTTSCEECCCCSHHHHHHHHHHHHHTTCCCSEEEEEEECTT-----
T ss_pred             CCCCCCCceecCCEeEEEeCCC-cCHHHHHHHhhccCCceECccCCHHHHHHHHHHHHhcCCCCCCEEEeeEcCC-----
Confidence            5689999999999999999995 9999999999998 89999999999999999999876544567777777543     


Q ss_pred             ccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885        105 NEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS  183 (483)
Q Consensus       105 g~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~  183 (483)
                                       .++.|.|+||+++.+  .+|.+ +|++...++|+.+....+.+.|++.+|+  ..++||||++
T Consensus        85 -----------------~~~~~~W~dg~~~~~--~~W~~~~P~~~~~~~Cv~~~~~~~~~~W~d~~C~--~~~~fICe~~  143 (144)
T 1qdd_A           85 -----------------KNRAWHWSSGSLVSY--KSWGIGAPSSVNPGYCVSLTSSTGFQKWKDVPCE--DKFSFVCKFK  143 (144)
T ss_dssp             -----------------SSSCCEETTCCCCCC--CCBCTTCSCSSSCCSEEEEEGGGTTCSEEEECTT--SCEEEEEEEE
T ss_pred             -----------------CCCeEEeCCCCCcCc--CccCCCCcCCCCCCCcEEEEecCCCCeEeCCCCC--CCceeeeeec
Confidence                             457899999999876  78999 9998667899999876554479999999  9999999986

>2py2_A Antifreeze protein type II; type II antifreeze protein; 1.70A {Clupea harengus}

Probab=99.93  E-value=6.9e-26  Score=196.21  Aligned_cols=129  Identities=19%  Similarity=0.366  Sum_probs=108.8

Q ss_pred             CCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccccc
Q psy14885         27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNE  106 (483)
Q Consensus        27 ~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~  106 (483)
                      ..||+||+.|+++||+++... ++|.+|+..|++.||+|++|+|++|++||..++....   ..||||+++..       
T Consensus         2 ~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~~---~~~WIGl~~~~-------   70 (136)
T 2py2_A            2 DECPTDWKMFNGRCFLFNPLQ-LHWADAQESCMKEGANLASIHSLEESTFVKELTSADL---IPSWIGGTDCQ-------   70 (136)
T ss_dssp             --CCTTCEEETTEEEEEEEEE-ECHHHHHHHHHTTTCEECCCCSHHHHHHHHTTSTTTT---CCEEEEEECCS-------
T ss_pred             CCCCcCceecCCEEEEEECCC-cCHHHHHHHHhhCCCEEeeeCCHHHHHHHHHHHHcCC---CCEeEeeEcCC-------
Confidence            479999999999999999995 9999999999999999999999999999999885432   56666666432       


Q ss_pred             CcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecchh
Q psy14885        107 DDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASIQ  185 (483)
Q Consensus       107 ~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~~~  185 (483)
                                     .++.|.|+||+++.+  .+|.+ +|++..+++||.+..... +.|+|.+|+  ..++||||+++.
T Consensus        71 ---------------~~~~w~W~dG~~~~y--~~W~~geP~~~~~~~Cv~~~~~~~-~~W~d~~C~--~~~~fIC~~~~~  130 (136)
T 2py2_A           71 ---------------VSTRWFWMDSTSMDY--ADWCAAQPDTTLTECCIQMNVGIG-KCWNDTPCT--HLHSSICAKPLK  130 (136)
T ss_dssp             ---------------STTCCEETTCCCCCC--CCBCTTCCCCCGGGCEEEEEETTT-TEEEEECTT--SCEEEEEEEECC
T ss_pred             ---------------CCCceEeCCCCCccc--CCCCCCCCCCCCCCCCeEEccCCC-CeEcCCCCC--CCccEEeeECcc
Confidence                           468899999999875  89999 998866689999976533 469999999  999999999864


Q ss_pred             h
Q psy14885        186 K  186 (483)
Q Consensus       186 ~  186 (483)
                      .
T Consensus       131 ~  131 (136)
T 2py2_A          131 H  131 (136)
T ss_dssp             -
T ss_pred             c
Confidence            3

>2kv3_A Regenerating islet-derived protein 4; GISP, C-type lectin, REG IV, disulfide bond, glycoPro lectin, secreted, sugar binding protein; NMR {Homo sapiens}

Probab=99.92  E-value=1.1e-25  Score=193.20  Aligned_cols=128  Identities=17%  Similarity=0.336  Sum_probs=106.8

Q ss_pred             CCCcccccccCCeEEEEecCCCCCHHHHHHHhhhc--CCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccc
Q psy14885         27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSL--DSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV  104 (483)
Q Consensus        27 ~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~--g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wi  104 (483)
                      +.||+||+.|+++||+++... ++|.+|+..|+.+  ||+||+|+|++|++||..++.... ....||||+++.      
T Consensus         1 ~~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~-~~~~~WIGl~~~------   72 (131)
T 2kv3_A            1 QSCAPGWFYHKSNCYGYFRKL-RNWSDAELECQSYGNGAHLASILSLKEASTIAEYISGYQ-RSQSIWIGLHDP------   72 (131)
T ss_dssp             CCSCTTCCEETTEEEEEEEEE-ECHHHHHHHHHTTSSSCEECCCSSHHHHHHHHHHHTCTT-SCCCCBCSEECS------
T ss_pred             CcCCcccEEcCCEeEEEECCC-CCHHHHHHHHhccCCCceEeeeCCHHHHHHHHHHHHhcC-CCCCEEEeccCC------
Confidence            369999999999999999995 9999999999999  999999999999999999986442 234445555432      


Q ss_pred             ccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885        105 NEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS  183 (483)
Q Consensus       105 g~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~  183 (483)
                                      ..++.|.|+||+++.+  .+|.+ +|  ...++|+.+....+...|++.+|+  ..++||||++
T Consensus        73 ----------------~~~~~~~W~dg~~~~~--~~W~~~~P--~~~~~C~~~~~~~~~~~W~~~~C~--~~~~~iCe~~  130 (131)
T 2kv3_A           73 ----------------QKRQQWQWIDGAMYLY--RSWSGKSM--GGNKHCAEMSSNNNFLTWSSNECN--KRQHFLCKYR  130 (131)
T ss_dssp             ----------------SSSSCCEETTCCCCSS--CCCSSCCC--TTCTTEEEECTTCTTCCEEEECTT--CCEEEEEEEC
T ss_pred             ----------------CCCCCeEeCCcCcccc--cccCCCCC--CCCCCceEEECCCCcCceecCCCC--CCceEEEeeC
Confidence                            2468899999999965  88999 99  346899999876544369999999  9999999997


Q ss_pred             h
Q psy14885        184 I  184 (483)
Q Consensus       184 ~  184 (483)
                      |
T Consensus       131 p  131 (131)
T 2kv3_A          131 P  131 (131)
T ss_dssp             C
T ss_pred             C
Confidence            4

>1uv0_A Pancreatitis-associated protein 1; lectin, C-type, secreted, inflammatory response, acute phase; 1.78A {Homo sapiens} SCOP: d.169.1.1 PDB: 2go0_A

Probab=99.92  E-value=2.1e-25  Score=195.97  Aligned_cols=136  Identities=20%  Similarity=0.322  Sum_probs=112.7

Q ss_pred             cCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhc-CCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccc
Q psy14885         26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSL-DSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV  104 (483)
Q Consensus        26 ~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~-g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wi  104 (483)
                      ...||+||+.|+++||+++... ++|.+|+..|+.+ ||+|++|+|.+|++||..++.........||||+++...    
T Consensus        11 ~~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~WiGl~~~~~----   85 (149)
T 1uv0_A           11 RIRCPKGSKAYGSHCYALFLSP-KSWTDADLACQKRPSGNLVSVLSGAEGSFVSSLVKSIGNSYSYVWIGLHDPTQ----   85 (149)
T ss_dssp             CCCCCTTCEEETTEEEEEEEEE-ECHHHHHHHHTTSTTCEECCCCSHHHHHHHHHHHTTSCTTCCEEEEEEECTTT----
T ss_pred             CCCCCccccccCCEEEEEECCC-CCHHHHHHHhhcCCCccEeEeCCHHHHHHHHHHHHhhccCCCCEEEeeEccCC----
Confidence            4679999999999999999994 9999999999998 899999999999999999997654445677888875430    


Q ss_pred             ccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885        105 NEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS  183 (483)
Q Consensus       105 g~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~  183 (483)
                         .         | ....+.|.|+||+++.+  .+|.+ +|++...++|+.+....+.+.|++.+|+  ..++||||++
T Consensus        86 ---~---------~-~~~~~~w~W~dg~~~~~--~~W~~~~P~~~~~~~Cv~~~~~~~~~~W~d~~C~--~~~~fICe~~  148 (149)
T 1uv0_A           86 ---G---------T-EPNGEGWEWSSSDVMNY--FAWERNPSTISSPGHCASLSRSTAFLRWKDYNCN--VRLPYVCKFT  148 (149)
T ss_dssp             ---T---------C-C--CCCCEETTCCCCCC--CCBSSCGGGSSSCCSEEEEEGGGTTCSEEEECTT--SCEEEEEEEC
T ss_pred             ---C---------C-ccCCCccEECCCCccCc--cCcCCCCcCCCCCCCCEEEEcCCCCCeEeCcCCC--CCCceEEeec
Confidence               0         0 00124599999999875  88999 9987667899999876544579999999  9999999986

>1jzn_A Galactose-specific lectin; C-type lectin, protein-disaccharide complex, sugar binding P; HET: BGC GAL; 2.20A {Crotalus atrox} SCOP: d.169.1.1 PDB: 1muq_A*

Probab=99.92  E-value=2.7e-25  Score=191.81  Aligned_cols=130  Identities=16%  Similarity=0.281  Sum_probs=110.8

Q ss_pred             CCCcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccc
Q psy14885         27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV  104 (483)
Q Consensus        27 ~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wi  104 (483)
                      ..||+||+.|+++||+++... ++|.+|+..|+.  .||+|++|+|.+|++||..++.........||||+++..     
T Consensus         1 ~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~WIGl~~~~-----   74 (135)
T 1jzn_A            1 NNCPLDWLPMNGLCYKIFNQL-KTWEDAEMFCRKYKPGCHLASFHRYGESLEIAEYISDYHKGQENVWIGLRDKK-----   74 (135)
T ss_dssp             CCSCTTSEEETTEEEEEEEEE-ECHHHHHHHHHHHSSSEEECCCCSHHHHHHHHHHHHHHCCSSCCEEEEEECTT-----
T ss_pred             CcCCCCceeeCCEEEEEECCc-cCHHHHHHHHhccCCCCEECccCCHHHHHHHHHHHHhcccCCCCEEEeeEcCC-----
Confidence            369999999999999999995 999999999999  699999999999999999998765434456677776432     


Q ss_pred             ccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcc-cCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885        105 NEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNV-QRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA  182 (483)
Q Consensus       105 g~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~-~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~  182 (483)
                                       .++.|.|+||+++.+  .+|.+ +|++.. .++|+.+....+.+.|++.+|+  ..++||||+
T Consensus        75 -----------------~~~~~~W~dg~~~~~--~~W~~~~P~~~~~~~~C~~~~~~~~~~~w~~~~C~--~~~~~ICe~  133 (135)
T 1jzn_A           75 -----------------KDFSWEWTDRSCTDY--LTWDKNQPDHYQNKEFCVELVSLTGYRLWNDQVCE--SKDAFLCQC  133 (135)
T ss_dssp             -----------------SSSCCEETTCCCCCC--CCBCTTCCCCGGGCCCEEEECGGGTTCSEEEECTT--SCEEEEEEE
T ss_pred             -----------------cCCceEECCCCccCc--CcCCcCCCCCCCCCCCceEEECCCCCCcCCCcCCC--CCCceeeee
Confidence                             468899999999876  88999 999754 6899999876543469999999  999999998


Q ss_pred             c
Q psy14885        183 S  183 (483)
Q Consensus       183 ~  183 (483)
                      +
T Consensus       134 ~  134 (135)
T 1jzn_A          134 K  134 (135)
T ss_dssp             C
T ss_pred             c
Confidence            6

>1gz2_A Ovocleidin-17, OC-17 ovocleidin; structural protein, CTLD, eggshell structural protein, phosphoprotein, sugar-binding protein, glycoprotein; HET: SEP; 1.5A {Gallus gallus} SCOP: d.169.1.1

Probab=99.92  E-value=2.2e-25  Score=194.10  Aligned_cols=130  Identities=22%  Similarity=0.312  Sum_probs=109.2

Q ss_pred             cCCCcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcCC------C-CCceeeecc
Q psy14885         26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDP------Q-RRKWYFGGT   96 (483)
Q Consensus        26 ~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~~------~-~~~~wig~~   96 (483)
                      +..||+||+.|++.||+++... ++|.+|+..|+.  .||+|++|+|.+|++||..++.....      . ...||||++
T Consensus         2 ~~~Cp~gw~~~~~~Cy~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~~~~~~~~WIGl~   80 (142)
T 1gz2_A            2 PDGCGPGWVPTPGGCLGFFSRE-LSWSRAESFCRRWGPGSHLAAVRSAAELRLLAELLNASRGGDGSGEGADGRVWIGLH   80 (142)
T ss_dssp             --CCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHTTCTTEEECCCCSHHHHHHHHHHHHCSSCCSSSCCCCSSCEEEEEE
T ss_pred             CCCCCcccEEcCCEEEEEcCCC-cCHHHHHHHHhccCCCceECccCCHHHHHHHHHHHHhcccccccccccCCCEEEEee
Confidence            4679999999999999999995 999999999999  99999999999999999999876532      1 445566665


Q ss_pred             cCCCCcccccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCc
Q psy14885         97 QQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEP  175 (483)
Q Consensus        97 ~~~~~~Wig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~  175 (483)
                      +..                      .++.|.|+||+++.+  .+|.+ +|++. .++|+.+....+...|++.+|+  ..
T Consensus        81 ~~~----------------------~~~~w~W~dg~~~~~--~~W~~~~P~~~-~~~C~~~~~~~~~~~w~~~~C~--~~  133 (142)
T 1gz2_A           81 RPA----------------------GSRSWRWSDGTAPRF--ASWHRTAKARR-GGRCAALRDEEAFTSWAARPCT--ER  133 (142)
T ss_dssp             CCT----------------------TCSSCEETTSCCCCC--CCBCSSSGGGC-SCSEEEECTTTTSSCEEEECTT--CC
T ss_pred             cCC----------------------CCCCcEeCCCCccCc--cCcCCCCCCCC-CCCCeEEecCCCCCeEecCCCC--CC
Confidence            432                      468899999999875  78999 99876 6899999876543469999999  99


Q ss_pred             eeeeeecc
Q psy14885        176 LLFICEAS  183 (483)
Q Consensus       176 ~~fvCe~~  183 (483)
                      ++||||++
T Consensus       134 ~~fICe~~  141 (142)
T 1gz2_A          134 NAFVCKAA  141 (142)
T ss_dssp             EEEEEEEE
T ss_pred             ceeEEeec
Confidence            99999987

>3vpp_A C-type lectin domain family 9 member A; dendritic cell, C-type lectin-like domain, membrane, immune; 1.64A {Homo sapiens}

Probab=99.92  E-value=3.9e-25  Score=190.26  Aligned_cols=126  Identities=20%  Similarity=0.319  Sum_probs=103.1

Q ss_pred             cCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885         26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN  105 (483)
Q Consensus        26 ~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig  105 (483)
                      +.+||+||+.|+++||+++... ++|.+|+..|+.+||+||+|++++|++||..++.... ....||||+++..      
T Consensus         1 c~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~~-~~~~~WIGl~~~~------   72 (132)
T 3vpp_A            1 SSPCPNNWIQNRESCYYVSEIW-SIWHTSQENCLKEGSTLLQIESKEEMDFITGSLRKIK-GSYDYWVGLSQDG------   72 (132)
T ss_dssp             -CCSCTTCEEETTEEEEECSSC-BCHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHTTSS-SCCEEEEEEEECT------
T ss_pred             CCCCCccceEeCCEEEEEECCc-cCHHHHHHHHHhcCCEEeEECCHHHHHHHHHHHhccC-CCccEEEEecccC------
Confidence            4689999999999999999995 9999999999999999999999999999999886542 2345666666432      


Q ss_pred             cCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecch
Q psy14885        106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASI  184 (483)
Q Consensus       106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~~  184 (483)
                                      .++.|.|+||+++.+  .+|.+ +|+. +.++|+.+..    +.|++.+|+  ..++||||+++
T Consensus        73 ----------------~~~~w~W~dg~~~~~--~~w~~~~p~~-~~~~C~~~~~----~~w~~~~C~--~~~~fiCe~~~  127 (132)
T 3vpp_A           73 ----------------HSGRWLWQDGSSPSP--GLLPAERSQS-ANQVCGYVKS----NSLLSSNCD--TWKYFICEKYA  127 (132)
T ss_dssp             ----------------TTCCEEETTSCCCCT--TSCCCC-------CEEEEEET----TEEEEEESS--SCBEEEEEEEC
T ss_pred             ----------------CCCceEecCCCcCCh--hhcccCCCCC-CCCceEEEEC----CeEeccCCC--CCceEECCccc
Confidence                            468899999999976  78988 6654 5689999963    359999999  99999999985

>3bx4_B Aggretin beta chain; toxin; 1.70A {Agkistrodon rhodostoma} PDB: 2vrp_B

Probab=99.92  E-value=3.2e-25  Score=194.34  Aligned_cols=120  Identities=23%  Similarity=0.421  Sum_probs=100.2

Q ss_pred             CCcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885         28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN  105 (483)
Q Consensus        28 ~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig  105 (483)
                      .||+||+.|+++||+++... ++|.+|+..|++  .||+|++|+|++|++||..++..... ...+|||+++.       
T Consensus        24 ~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~-~~~~WIGl~~~-------   94 (146)
T 3bx4_B           24 DCPSGWSSYEGHCYKPFNEP-KNWADAERFCKLQPKHSHLVSFQSAEEADFVVKLTRPRLK-ANLVWMGLSNI-------   94 (146)
T ss_dssp             -CCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHSSSCCEECCCSSHHHHHHHHHHHTTTTT-TSEEECSCCCT-------
T ss_pred             CCCcCcEeeCCEEEEEECCC-cCHHHHHHHHhccCCCceEeccCCHHHHHHHHHHHhhcCC-CCCEEEecccC-------
Confidence            79999999999999999995 999999999999  59999999999999999999865421 44555555532       


Q ss_pred             cCcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885        106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS  183 (483)
Q Consensus       106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~  183 (483)
                                     ..++.|.|+||+++.+  .+|..+|      +|+.+....+  .|+|.+|+  ..++||||++
T Consensus        95 ---------------~~~~~~~W~dg~~~~~--~~W~g~P------~C~~~~~~~g--~w~~~~C~--~~~~~ICe~~  145 (146)
T 3bx4_B           95 ---------------WHGCNWQWSDGARLNY--KDWQEQS------ECLAFRGVHT--EWLNMDCS--STCSFVCKFK  145 (146)
T ss_dssp             ---------------TSSSCEEETTCCCCCS--CCBCSCC------EEEEEETTCC--CEEEEETT--SCEEEEEEEE
T ss_pred             ---------------CCCCceEeCCCCcccc--cCcCCCC------CceEEECCCC--eEecCCCC--CCcceEEeec
Confidence                           2468899999999875  7886444      8999976544  69999999  9999999987

>1tn3_A Tetranectin; plasminogen binding, kringle 4, C-type lectin, carbohydrate recognition domain; 2.00A {Homo sapiens} SCOP: d.169.1.1 PDB: 1rjh_A 3l9j_C

Probab=99.92  E-value=2.3e-25  Score=192.80  Aligned_cols=129  Identities=16%  Similarity=0.282  Sum_probs=110.5

Q ss_pred             cCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885         26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN  105 (483)
Q Consensus        26 ~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig  105 (483)
                      ...||+||. |+++||+++... ++|.+|+..|+.+||+|++|+|++|++||..++.........||||+++..      
T Consensus         3 ~~~Cp~gw~-~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~WIGl~~~~------   74 (137)
T 1tn3_A            3 QTVCLKGTK-VHMKCFLAFTQT-KTFHEASEDCISRGGTLSTPQTGSENDALYEYLRQSVGNEAEIWLGLNDMA------   74 (137)
T ss_dssp             CCEEEECSS-SSEEEEEEEEEE-ECHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHHHHTCTTCEEEEEEEEEE------
T ss_pred             CCCCCCCeE-ECCEEEEEeCCC-CCHHHHHHHHHhcCCEEcccCCHHHHHHHHHHHHhhcCCCCCEEEeeEccC------
Confidence            357999998 999999999995 999999999999999999999999999999998766444566777776432      


Q ss_pred             cCcccccccccCCcCCCCCccccCCCCccccccccCC---C-CCCCcccCCeEEEecccccccccccccCCCCceeeeee
Q psy14885        106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFL---P-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICE  181 (483)
Q Consensus       106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~---~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe  181 (483)
                                      .++.|.|+||+++.+  .+|.   + +|++.+.++|+.+..... +.|++.+|+  ..++||||
T Consensus        75 ----------------~~~~w~W~dg~~~~~--~~W~~~~~g~P~~~~~~~Cv~~~~~~~-~~W~d~~C~--~~~~fiCe  133 (137)
T 1tn3_A           75 ----------------AEGTWVDMTGARIAY--KNWETEITAQPDGGKTENCAVLSGAAN-GKWFDKRCR--DQLPYICQ  133 (137)
T ss_dssp             ----------------ETTEEEETTSCBCSC--CCBCCTTTCSSCCGGGCCEEEEETTTT-TEEEEECTT--SCEEEEEE
T ss_pred             ----------------CCceEEeCCcCCCcc--cccCcCCCCcCCCCCccCCcEEccCCC-CeEeCcCCC--CCccceEe
Confidence                            367899999999875  8899   9 999866789999975433 469999999  99999999


Q ss_pred             cc
Q psy14885        182 AS  183 (483)
Q Consensus       182 ~~  183 (483)
                      ++
T Consensus       134 ~~  135 (137)
T 1tn3_A          134 FG  135 (137)
T ss_dssp             EE
T ss_pred             Ee
Confidence            97

>1wmz_A Lectin CEL-I, N-acetyl-D-galactosamine-specific C-type; C-type lectin, N-acetylgalactosamine, invertebrate, sugar binding protein; HET: NGA A2G; 1.70A {Cucumaria echinata} SCOP: d.169.1.1 PDB: 1wmy_A*

Probab=99.92  E-value=4.1e-25  Score=192.09  Aligned_cols=129  Identities=21%  Similarity=0.461  Sum_probs=111.1

Q ss_pred             CCcccccccCCeEEEEecCCCCCHHHHHHHhh-------hcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCC
Q psy14885         28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCK-------SLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSP  100 (483)
Q Consensus        28 ~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~-------~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~  100 (483)
                      .||+||+.|+++||+++... ++|.+|+..|+       ..||+|++|+|.+|++||..++.........||||+++.. 
T Consensus         2 ~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~WiGl~~~~-   79 (140)
T 1wmz_A            2 QCPTDWEAEGDHCYRFFNTL-TTWENAHHECVSYSCSTLNVRSDLVSVHSAAEQAYVFNYWRGIDSQAGQLWIGLYDKY-   79 (140)
T ss_dssp             CCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHTTCBGGGTEEEEECCCCSHHHHHHHHHHHHHHCCSSCCEEEEEECSS-
T ss_pred             cCCCcceecCCEEEEEECCC-cCHHHHHHhhhhhccCCCCCCcEEcccCCHHHHHHHHHHHhhccCCCCCEEEeeeecC-
Confidence            69999999999999999995 99999999999       9999999999999999999999766444556677776432 


Q ss_pred             CcccccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcc-cCCeEEEecccccccccccccCCCCceee
Q psy14885        101 NLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNV-QRDYLAYSFSQSLKRWGFERVTGMEPLLF  178 (483)
Q Consensus       101 ~~Wig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~-~~~Cv~~~~~~~~~~W~~~~C~~~~~~~f  178 (483)
                                           .++.|.|+||+++.+  .+|.+ +|++.. .++|+.+....+. .|++.+|+  ..++|
T Consensus        80 ---------------------~~~~~~W~dg~~~~~--~~W~~~~P~~~~~~~~Cv~~~~~~~~-~W~~~~C~--~~~~f  133 (140)
T 1wmz_A           80 ---------------------NEGDFIWTDGSKVGY--TKWAGGQPDNWNNAEDYGQFRHTEGG-AWNDNSAA--AQAKY  133 (140)
T ss_dssp             ---------------------STTCCEETTCCCCCC--CCBCTTCCCCGGGCEEEEEECSSTTT-CEEEEETT--CCEEE
T ss_pred             ---------------------CCCeeEECCcCcccc--cCcCcccCCCCCCcCCcEEEccCCCC-CEeCCCCC--CCceE
Confidence                                 468899999999865  78999 998753 6899999876542 69999999  99999


Q ss_pred             eeecch
Q psy14885        179 ICEASI  184 (483)
Q Consensus       179 vCe~~~  184 (483)
                      |||++.
T Consensus       134 ICe~~~  139 (140)
T 1wmz_A          134 MCKLTF  139 (140)
T ss_dssp             EEEEEE
T ss_pred             EEEEec
Confidence            999974

>1c3a_A Flavocetin-A: alpha subunit; C-type lectin-like domains, membrane protein; 2.50A {Trimeresurus flavoviridis} SCOP: d.169.1.1 PDB: 1v4l_A

Probab=99.92  E-value=8e-25  Score=188.97  Aligned_cols=126  Identities=17%  Similarity=0.248  Sum_probs=108.4

Q ss_pred             CCCcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcCCCCC-ceeeecc--cCCCC
Q psy14885         27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRR-KWYFGGT--QQSPN  101 (483)
Q Consensus        27 ~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~~~~~-~~wig~~--~~~~~  101 (483)
                      ..||+||+.|+++||+++... ++|.+|+..|+.  .||+|++|+|.+|++||..++........ .||||++  +..  
T Consensus         2 ~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~~WIGl~~~~~~--   78 (135)
T 1c3a_A            2 FDCIPGWSAYDRYCYQAFSKP-KNWEDAESFCEEGVKTSHLVSIESSGEGDFVAQLVAEKIKTSFQYVWIGLRIQNKE--   78 (135)
T ss_dssp             CCCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCSHHHHHHHHHHHHHHCCSCCSEEEEEEEECCCS--
T ss_pred             cCCCCcCEecCCeeEEEeCCC-cCHHHHHHHHhhcCCCCEECeeCCHHHHHHHHHHHhhccccCCCcEEecccccCCC--
Confidence            469999999999999999995 999999999999  89999999999999999999877643334 6777776  432  


Q ss_pred             cccccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeee
Q psy14885        102 LWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFIC  180 (483)
Q Consensus       102 ~Wig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvC  180 (483)
                                          .++.|.|+||+++.+  .+|.+ +|+     +|+.+....+.+.|++.+|+  ..++|||
T Consensus        79 --------------------~~~~~~W~dg~~~~~--~~W~~~~P~-----~C~~~~~~~~~~~W~d~~C~--~~~~fIC  129 (135)
T 1c3a_A           79 --------------------QQCRSEWSDASSVNY--ENLVKQFSK-----KCYALKKGTELRTWFNVYCG--TENPEVC  129 (135)
T ss_dssp             --------------------SSCCCBCTTSCBCCC--CCBCGGGCC-----CEEEEETTSCSCSBEEECTT--SCEEEEE
T ss_pred             --------------------CCCceEECCCCcccc--cccCCCCCC-----cceEEeccCCCCeEccCCCC--CCccEEc
Confidence                                467899999999875  78999 997     89999876543469999999  9999999


Q ss_pred             ecch
Q psy14885        181 EASI  184 (483)
Q Consensus       181 e~~~  184 (483)
                      |+++
T Consensus       130 e~~~  133 (135)
T 1c3a_A          130 KYTP  133 (135)
T ss_dssp             EECC
T ss_pred             ccCC
Confidence            9984

>1ypq_A Oxidised low density lipoprotein (lectin-like) receptor 1; oxidized low density lipoprotein receptor, LOX-1, CTLD, C- type lectin like domain; 1.40A {Homo sapiens} SCOP: d.169.1.1 PDB: 1ypu_A 1yxk_A 3vlg_A 1ypo_A 1yxj_A

Probab=99.92  E-value=7.9e-25  Score=189.14  Aligned_cols=127  Identities=19%  Similarity=0.340  Sum_probs=107.9

Q ss_pred             ccCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccc
Q psy14885         25 LELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV  104 (483)
Q Consensus        25 ~~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wi  104 (483)
                      ....||+||+.|+++||+++... ++|.+|+..|+++||+|++|+|.+|++||..++..   ....||||+++..     
T Consensus         5 ~~~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~---~~~~~WIGl~~~~-----   75 (135)
T 1ypq_A            5 CSAPCPQDWIWHGENCYLFSSGS-FNWEKSQEKCLSLDAKLLKINSTADLDFIQQAISY---SSFPFWMGLSRRN-----   75 (135)
T ss_dssp             CCCSSCTTSEEETTEEEEECSSC-BCHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHTT---CCCCEEEEEEESS-----
T ss_pred             cCCcCCcccEEcCCEEEEEECCc-cCHHHHHHHHHhCCCEEeEeCCHHHHHHHHHHHhc---cCCCEEEeccccC-----
Confidence            35789999999999999999995 99999999999999999999999999999999853   2345666665432     


Q ss_pred             ccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcc-cCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885        105 NEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNV-QRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA  182 (483)
Q Consensus       105 g~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~-~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~  182 (483)
                                       .++.|.|+||+++..+ .+|.+ +|++.. .++|+.+..    +.|++.+|+  ..++||||+
T Consensus        76 -----------------~~~~w~W~dg~~~~~~-~~w~~g~P~~~~~~~~Cv~~~~----~~w~~~~C~--~~~~fICe~  131 (135)
T 1ypq_A           76 -----------------PSYPWLWEDGSPLMPH-LFRVRGAVSQTYPSGTCAYIQR----GAVYAENCI--LAAFSICQK  131 (135)
T ss_dssp             -----------------TTSCCEETTSCBCCTT-SCCEEESCSCCCTTCEEEEEET----TEEEEEETT--SCBEEEEEE
T ss_pred             -----------------CCCCeEeCCcCccCcc-cccccCCCCCCCCCCCeeEEeC----CcEEccCCC--CCeeeEeee
Confidence                             4688999999998644 88999 998743 689999963    359999999  999999999


Q ss_pred             ch
Q psy14885        183 SI  184 (483)
Q Consensus       183 ~~  184 (483)
                      ++
T Consensus       132 ~~  133 (135)
T 1ypq_A          132 KA  133 (135)
T ss_dssp             EC
T ss_pred             cC
Confidence            84

>1jwi_A Bitiscetin; domain swapping, C-type lectin, toxin; 2.00A {Bitis arietans} SCOP: d.169.1.1 PDB: 1uex_A

Probab=99.92  E-value=7e-25  Score=188.31  Aligned_cols=126  Identities=19%  Similarity=0.322  Sum_probs=103.3

Q ss_pred             CCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCC-ceeeecc--cCCCCcc
Q psy14885         27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRR-KWYFGGT--QQSPNLW  103 (483)
Q Consensus        27 ~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~-~~wig~~--~~~~~~W  103 (483)
                      ..||+||+.|+++||+++... ++|.+|+..|+.+||+|++|+|.+|++||..++........ .||||++  +..    
T Consensus         2 ~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~~WIGl~~~~~~----   76 (131)
T 1jwi_A            2 PGCLPDWSSYKGHCYKVFKKV-GTWEDAEKFCVENSGHLASIDSKEEADFVTKLASQTLTKFVYDAWIGLRDESKT----   76 (131)
T ss_dssp             --CCTTSEEETTEEEEEEEEE-ECHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHHHHC--CCSCEEEEEEECCSS----
T ss_pred             cCCCCCCEEeCCEeEEEECCC-cCHHHHHHHHHHcCCeECccCCHHHHHHHHHHHhhcccccCccEEEeeeecCCC----
Confidence            469999999999999999995 99999999999999999999999999999999876543334 6777776  432    


Q ss_pred             cccCcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885        104 VNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS  183 (483)
Q Consensus       104 ig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~  183 (483)
                                        .++.|.|+||+++.+  .+|. +|+     +|+.+....+.+.|++.+|+  ..++||||++
T Consensus        77 ------------------~~~~~~W~dg~~~~~--~~W~-~P~-----~C~~~~~~~~~~~w~~~~C~--~~~~fICe~~  128 (131)
T 1jwi_A           77 ------------------QQCSPQWTDGSSVVY--ENVD-EPT-----KCFGLDVHTEYRTWTDLPCG--EKNPFICKSR  128 (131)
T ss_dssp             ------------------SSSCSBCTTSCBCCS--CCBS-SCC-----CEEEECGGGTTSSEEEECTT--SCEEEEEEC-
T ss_pred             ------------------CCCceEEeCcCcccC--cCCC-CCC-----CceEEecCCCCCeEcCcCCC--CCcceeeCcC
Confidence                              468899999999876  7898 875     89999876533469999999  9999999998


Q ss_pred             hh
Q psy14885        184 IQ  185 (483)
Q Consensus       184 ~~  185 (483)
                      .+
T Consensus       129 ~p  130 (131)
T 1jwi_A          129 LP  130 (131)
T ss_dssp             --
T ss_pred             CC
Confidence            53

>1egg_A Macrophage mannose receptor; C-type lectin, sugar binding protein; 2.30A {Homo sapiens} SCOP: d.169.1.1 PDB: 1egi_A

Probab=99.91  E-value=1.1e-24  Score=190.96  Aligned_cols=131  Identities=18%  Similarity=0.323  Sum_probs=108.4

Q ss_pred             CCCcccc--cccCCeEEEEec----CCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCC
Q psy14885         27 LRCPQHW--VQYRDSCYRFVK----SPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSP  100 (483)
Q Consensus        27 ~~C~~gw--~~~~~~Cy~~~~----~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~  100 (483)
                      ..||.||  +.|+++||+++.    . .++|.+|+..|+.+||+|++|++.+|++||..++.........||||+++.. 
T Consensus         3 ~~Cp~gw~~~~~~~~CY~~~~~~~~~-~~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~WIGl~~~~-   80 (147)
T 1egg_A            3 PKCPEDWGASSRTSLCFKLYAKGKHE-KKTWFESRDFCRALGGDLASINNKEEQQTIWRLITASGSYHKLFWLGLTYGS-   80 (147)
T ss_dssp             --CCTTCEECSSSSCEEEEECSCGGG-CBCHHHHHHHHHTTTCEECCCCSHHHHHHHHHHHHHHTCTTCEEEEEEECC--
T ss_pred             CCCCCCCccccCCCEEEEEeccCCcc-ccCHHHHHHHHHHcCCEECccCCHHHHHHHHHHHHhccCCCCcEEEeeecCC-
Confidence            4699999  999999999998    7 4999999999999999999999999999999998776544567777776533 


Q ss_pred             CcccccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCc-ccCCeEEEecccccccccccccCCCCceee
Q psy14885        101 NLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADN-VQRDYLAYSFSQSLKRWGFERVTGMEPLLF  178 (483)
Q Consensus       101 ~~Wig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~-~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~f  178 (483)
                                           .++.|.|+||+++.+  .+|.+ +|++. +.++|+.+..... +.|++.+|+  ..++|
T Consensus        81 ---------------------~~~~w~W~dg~~~~~--~~W~~g~P~~~~~~~~Cv~~~~~~~-~~W~d~~C~--~~~~f  134 (147)
T 1egg_A           81 ---------------------PSEGFTWSDGSPVSY--ENWAYGEPNNYQNVEYCGELKGDPT-MSWNDINCE--HLNNW  134 (147)
T ss_dssp             ------------------------CCCCTTSCCCCC--CCCCTTCSCGGGSCCEEEEEECSTT-CCEEEEETT--SCBEE
T ss_pred             ---------------------CCCcEEecCCCCccc--CccCCCCCCCCCCCCCCeEECCCCC-CceeccCCC--CCccE
Confidence                                 467899999999876  78999 99874 4689999976522 469999999  99999


Q ss_pred             eeecchh
Q psy14885        179 ICEASIQ  185 (483)
Q Consensus       179 vCe~~~~  185 (483)
                      |||+++.
T Consensus       135 ICe~~~~  141 (147)
T 1egg_A          135 ICQIQKG  141 (147)
T ss_dssp             EEECCC-
T ss_pred             EeeCCCC
Confidence            9999853

>2afp_A Protein (SEA raven type II antifreeze protein); recombinant SEA raven protein, solution backbone fold, C- type lectin; NMR {Hemitripterus americanus} SCOP: d.169.1.1

Probab=99.91  E-value=4e-25  Score=189.36  Aligned_cols=124  Identities=22%  Similarity=0.416  Sum_probs=105.8

Q ss_pred             cCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885         26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN  105 (483)
Q Consensus        26 ~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig  105 (483)
                      ...||+||+.|+++||+++... ++|.+|+..|+.+||+|++|+|++|++||..+      ....||||+++.       
T Consensus         4 ~~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~------~~~~~WIGl~~~-------   69 (129)
T 2afp_A            4 GPNCPAGWQPLGDRCIYYETTA-MTWALAETNCMKLGGHLASIHSQEEHSFIQTL------NAGVVWIGGSAC-------   69 (129)
T ss_dssp             CCSSCSSSCCCSSSEECCCCSC-CCHHHHHHHHHHHSCEECCCSSSHHHHHHHHH------CSSCBCCSCBCS-------
T ss_pred             cCCCCcCcEEcCCEEEEEECCc-CCHHHHHHHHHHcCCEECCcCCHHHHHHHHhc------CCCCEEEccccc-------
Confidence            5689999999999999999995 99999999999999999999999999999987      223445555432       


Q ss_pred             cCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885        106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS  183 (483)
Q Consensus       106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~  183 (483)
                                     ..++.|.|+||+++.+  .+|.+ +|++..+++|+.+....+. .|++.+|+  ..++||||++
T Consensus        70 ---------------~~~~~~~W~dg~~~~~--~~W~~~~P~~~~~~~C~~~~~~~~~-~w~~~~C~--~~~~~iCe~~  128 (129)
T 2afp_A           70 ---------------LQAGAWTWSDGTPMNF--RSWCSTKPDDVLAACCMQMTAAADQ-CWDDLPCP--ASHKSVCAMT  128 (129)
T ss_dssp             ---------------SSSSCCBSSSSCCCCC--CCSSSCCSCCSTTCCBCCBCCSSSS-CBCCBCSC--CCCCCCEEEC
T ss_pred             ---------------CCCCceEeCCCCcccc--CCcCCCccCCCCCCCCeEEccCCCC-EEeCCCCC--CCcceEEeee
Confidence                           2468899999999965  88999 9998656899999766543 69999999  9999999986

>1ukm_A EMS16 A chain, EMS16 subunit A; domain swapping, C-type lectin, toxin; HET: NAG; 1.90A {Echis multisquamatus} SCOP: d.169.1.1 PDB: 1v7p_A*

Probab=99.91  E-value=9.4e-25  Score=188.19  Aligned_cols=128  Identities=16%  Similarity=0.327  Sum_probs=107.6

Q ss_pred             CCCcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcCCCCC-ceeeecccCCCCcc
Q psy14885         27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRR-KWYFGGTQQSPNLW  103 (483)
Q Consensus        27 ~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~~~~~-~~wig~~~~~~~~W  103 (483)
                      ..||+||+.|+++||+++... ++|.+|+..|+.  .||+|++|+|.+|++||..++........ .||||+++..    
T Consensus         2 ~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~~WIGl~~~~----   76 (134)
T 1ukm_A            2 FDCPSDWTAYDQHCYLAIGEP-QNWYEAERFCTEQAKDGHLVSIQSREEGNFVAQLVSGFMHRSEIYVWIGLRDRR----   76 (134)
T ss_dssp             -CCSTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCSHHHHHHHHHHTGGGGGSSCCEEEEEEEECC----
T ss_pred             cCCCCccEecCCEEEEEECCC-cCHHHHHHHHhhcCCCcEECccCCHHHHHHHHHHHhhhccCCCCCEEEeeecCC----
Confidence            469999999999999999995 999999999999  89999999999999999999876533334 6777776541    


Q ss_pred             cccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885        104 VNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA  182 (483)
Q Consensus       104 ig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~  182 (483)
                                      ...++.|.|+||+++.+  .+|.+ +|+     +|+.+....+.+.|++.+|+  ..++||||+
T Consensus        77 ----------------~~~~~~~~W~dg~~~~~--~~W~~g~P~-----~C~~~~~~~~~~~W~~~~C~--~~~~~ICe~  131 (134)
T 1ukm_A           77 ----------------EEQQCNPEWNDGSKIIY--VNWKEGESK-----MCQGLTKWTNFHDWNNINCE--DLYPFVCKF  131 (134)
T ss_dssp             ----------------SSSCSCCBCTTSCBCCC--CCBCTTCCC-----CEEEEEGGGTSCSEEEECTT--SCEEEEEEE
T ss_pred             ----------------CCCCCceEEcCcCcccc--ceECCCcCc-----cceEEEecCCCCeeecCCCC--CCceeEEeE
Confidence                            02468899999999876  78999 997     99999876543469999999  999999999


Q ss_pred             ch
Q psy14885        183 SI  184 (483)
Q Consensus       183 ~~  184 (483)
                      ++
T Consensus       132 ~~  133 (134)
T 1ukm_A          132 SA  133 (134)
T ss_dssp             EC
T ss_pred             cC
Confidence            73

>1umr_A Convulxin alpha, CVX alpha; lectin, C-type lectin, platelet, sugar-binding protein, activator, snake venom; 2.40A {Crotalus durissus terrificus} SCOP: d.169.1.1 PDB: 1uos_A

Probab=99.91  E-value=1e-24  Score=188.37  Aligned_cols=126  Identities=17%  Similarity=0.356  Sum_probs=107.8

Q ss_pred             CCCcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcCCCCC-ceeeecc--cCCCC
Q psy14885         27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRR-KWYFGGT--QQSPN  101 (483)
Q Consensus        27 ~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~~~~~-~~wig~~--~~~~~  101 (483)
                      ..||+||+.|+++||+++... ++|.+|+..|+.  .||+||+|+|++|++||..++........ .||||++  +.   
T Consensus         2 ~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~~WIGl~~~~~---   77 (135)
T 1umr_A            2 LHCPSDWYYYDQHCYRIFNEE-MNWEDAEWFCTKQAKGAHLVSIKSAKEADFVAWMVTQNIEESFSHVSIGLRVQNK---   77 (135)
T ss_dssp             CSSCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCSHHHHHHHHHHHHHHSCTTCCEEECSEEECCS---
T ss_pred             CCCCCCCEEcCCEeEEEECCC-CCHHHHHHHHHccCCCceECccCCHHHHHHHHHHHHhhcccCCCCEEEeccccCC---
Confidence            479999999999999999995 999999999999  89999999999999999999876643334 6677666  33   


Q ss_pred             cccccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeee
Q psy14885        102 LWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFIC  180 (483)
Q Consensus       102 ~Wig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvC  180 (483)
                                         ..++.|.|+||+++.+  .+|.+ +|+     +|+.+....+.+.|++.+|+  ..++|||
T Consensus        78 -------------------~~~~~w~W~dg~~~~~--~~W~~g~P~-----~C~~~~~~~~~g~W~~~~C~--~~~~~IC  129 (135)
T 1umr_A           78 -------------------EKQCSTKWSDGSSVSY--DNLLDLYIT-----KCSLLKKETGFRKWFVASCI--GKIPFVC  129 (135)
T ss_dssp             -------------------SSSSCCBCTTSCBCCC--CCBCGGGCC-----CEEEEEGGGTTCSBEEECTT--CCEEEEE
T ss_pred             -------------------CCCCccCcCCCCeecc--cccCCCCCC-----ccEEEecCCCCCeEecCCCC--CCCcEEe
Confidence                               2468899999999876  78999 996     99999876543469999999  9999999


Q ss_pred             ecch
Q psy14885        181 EASI  184 (483)
Q Consensus       181 e~~~  184 (483)
                      |+++
T Consensus       130 e~~~  133 (135)
T 1umr_A          130 KFPP  133 (135)
T ss_dssp             EECC
T ss_pred             CccC
Confidence            9974

>2c6u_A CLEC1B protein; lectin, rhodocytin, aggretin, C-type lectin-like, platelets, thrombosis; 1.6A {Homo sapiens}

Probab=99.91  E-value=5.9e-25  Score=186.60  Aligned_cols=120  Identities=19%  Similarity=0.401  Sum_probs=104.1

Q ss_pred             CCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccccc
Q psy14885         27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNE  106 (483)
Q Consensus        27 ~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~  106 (483)
                      ..||+||+.|+++||+++... ++|.+|+..|+.+||+|++|+|.+|++||..++.      ..||||+++..       
T Consensus         1 ~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~------~~~WiGl~~~~-------   66 (122)
T 2c6u_A            1 SPCDTNWRYYGDSCYGFFRHN-LTWEESKQYCTDMNATLLKIDNRNIVEYIKARTH------LIRWVGLSRQK-------   66 (122)
T ss_dssp             CCSCTTEEEETTEEEEEEEEE-ECHHHHHHHHHHTTCEECCCCSHHHHHHHHTTCC------SCEEEEEECSS-------
T ss_pred             CCCCccceEeCCEEEEEECCc-CCHHHHHHHHHhCCCeEeeECCHHHHHHHHHhhc------CCEEEEeeecC-------
Confidence            369999999999999999995 9999999999999999999999999999998874      24566666432       


Q ss_pred             CcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecch
Q psy14885        107 DDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASI  184 (483)
Q Consensus       107 ~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~~  184 (483)
                                     .++.|.|+||+++.+   +|.+ +|++.+.++|+.+.  .  +.|++.+|+  ..++||||+++
T Consensus        67 ---------------~~~~~~W~dg~~~~~---~W~~~~P~~~~~~~C~~~~--~--g~w~~~~C~--~~~~~ICe~~~  121 (122)
T 2c6u_A           67 ---------------SNEVWKWEDGSVISE---NMFEFLEDGKGNMNCAYFH--N--GKMHPTFCE--NKHYLMCERKA  121 (122)
T ss_dssp             ---------------TTSCCBCTTSCBCCG---GGGGGBCCCCTTCCEEEEE--T--TEEEEECTT--SCEEEEEEEEC
T ss_pred             ---------------CCCCeEeCCCCccCc---CcccCCCCCCCCCCeeEEc--C--CeEEeccCC--CCceEeeeecC
Confidence                           468899999999874   7999 99987678999994  2  369999999  99999999974

>3ubu_A Agglucetin subunit alpha-1; platelet inhibiting, agkisacucetin, dimer, toxin, C-type LEC GPIB inhibitor, GPIB binding; 1.91A {Deinagkistrodon acutus}

Probab=99.91  E-value=1.1e-24  Score=186.97  Aligned_cols=127  Identities=20%  Similarity=0.369  Sum_probs=106.5

Q ss_pred             CCCcccccccCCeEEEEecCCCCCHHHHHHHhhhc--CCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccc
Q psy14885         27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSL--DSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV  104 (483)
Q Consensus        27 ~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~--g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wi  104 (483)
                      ..||+||+.|+++||+++... ++|.+|+..|+++  ||+||+|++++|++||..++..... ...||||+++..     
T Consensus         2 ~~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~~~G~~La~i~s~~e~~~l~~~~~~~~~-~~~~WIGl~~~~-----   74 (131)
T 3ubu_A            2 VDCLPGWSAYDQSCYRVFKLL-KTWDDAEKFCTERPKGGHLVSIESAGERDFVAQLVSENKQ-TDNVWLGLKIQS-----   74 (131)
T ss_dssp             CCCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHTSTTCCEECCCCSHHHHHHHHHHHHHTTC-CSCEEEEEEEEC-----
T ss_pred             cCCCccCEecCCEeeEEcCCC-cCHHHHHHHHhccCCCceEceeCCHHHHHHHHHHHHhcCC-CCCEEEeEecCC-----
Confidence            479999999999999999995 9999999999998  8999999999999999999876532 236677776543     


Q ss_pred             ccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885        105 NEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS  183 (483)
Q Consensus       105 g~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~  183 (483)
                                     ...++.|.|+||+++.+  .+|.+ +|     ++|+.+....+...|++.+|+  ..++||||++
T Consensus        75 ---------------~~~~~~~~W~dg~~~~~--~~w~~~~~-----~~Cv~~~~~~~~~~W~~~~C~--~~~~fiCe~~  130 (131)
T 3ubu_A           75 ---------------KGQQCSTEWTDGSSVSY--ENFSEYQS-----KKCFVLEKNTGFRTWLNLNCG--SEYSFVCKSP  130 (131)
T ss_dssp             ---------------SSSSSCCBCTTSCBCCC--CCBCTTTC-----CCEEEECGGGTSCSEEEECTT--CCEEEEEEEC
T ss_pred             ---------------CCCCCceEeCCCCccce--eccCCCCC-----CCcEEEeCCCCCCeEcCCCCC--CCceeEEecC
Confidence                           01268899999999976  78988 65     689999876553469999999  9999999998


Q ss_pred             h
Q psy14885        184 I  184 (483)
Q Consensus       184 ~  184 (483)
                      +
T Consensus       131 p  131 (131)
T 3ubu_A          131 P  131 (131)
T ss_dssp             C
T ss_pred             C
Confidence            4

>1fvu_A Botrocetin alpha chain; VON WILLBRAND factor modulator, C-type lectin, metal- binding, loop exchanged dimer, toxin; 1.80A {Bothrops jararaca} SCOP: d.169.1.1 PDB: 1ijk_B 1u0n_B 1u0o_A

Probab=99.91  E-value=9.6e-25  Score=187.97  Aligned_cols=126  Identities=16%  Similarity=0.292  Sum_probs=107.1

Q ss_pred             CCcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHh-HHHHHHHHhhhcCCC-CCceeeecc--cCCCC
Q psy14885         28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDAD-EHGFIMYQLFWQDPQ-RRKWYFGGT--QQSPN  101 (483)
Q Consensus        28 ~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~-e~~~l~~~~~~~~~~-~~~~wig~~--~~~~~  101 (483)
                      +||+||+.|++.||+++... ++|.+|+..|+.  .||+|++|+|.+ |++||..++...... ...||||++  +..  
T Consensus         1 ~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~~~g~~La~i~s~~~e~~~l~~~~~~~~~~~~~~~WIGl~~~~~~--   77 (133)
T 1fvu_A            1 DCPSGWSSYEGNCYKFFQQK-MNWADAERFCSEQAKGGHLVSIKIYSKEKDFVGDLVTKNIQSSDLYAWIGLRVENKE--   77 (133)
T ss_dssp             CCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCTTSTHHHHHHHHHHHHCCSSCCEEEEEEEECCSS--
T ss_pred             CcCCCcEEcCCeeEEEECCC-cCHHHHHHHHhccCCCcEEeeecChHHHHHHHHHHHhhccccCCCCEEEeeecccCC--
Confidence            59999999999999999995 999999999999  799999999999 999999998765432 466777776  432  


Q ss_pred             cccccCcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeee
Q psy14885        102 LWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICE  181 (483)
Q Consensus       102 ~Wig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe  181 (483)
                                          .++.|.|+||+++.+  .+|.++|+    ++|+.+....+.+.|++.+|+  ..++||||
T Consensus        78 --------------------~~~~w~W~dg~~~~~--~~W~~~P~----~~C~~~~~~~~~~~w~~~~C~--~~~~fICe  129 (133)
T 1fvu_A           78 --------------------KQCSSEWSDGSSVSY--ENVVERTV----KKCFALEKDLGFVLWINLYCA--QKNPFVCK  129 (133)
T ss_dssp             --------------------SSSCCBCTTSCBCCC--CCBCGGGC----CCEEEEETTTTSCSEEEECTT--CCEEEEEE
T ss_pred             --------------------CCCccEeCCCCcccc--cCcccCCC----CCcEEEEecCCCCeEecCCCC--CCCCEEee
Confidence                                467899999999875  78987555    799999876543469999999  99999999


Q ss_pred             cch
Q psy14885        182 ASI  184 (483)
Q Consensus       182 ~~~  184 (483)
                      +++
T Consensus       130 ~~~  132 (133)
T 1fvu_A          130 SPP  132 (133)
T ss_dssp             ECC
T ss_pred             ecC
Confidence            984

>2ox9_A Collectin placenta 1; C-type lectin, sugar binding protein; HET: GAL NAG FUC; 1.95A {Mus musculus} PDB: 2ox8_A

Probab=99.91  E-value=1.6e-24  Score=188.44  Aligned_cols=125  Identities=26%  Similarity=0.484  Sum_probs=106.8

Q ss_pred             CCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccccc
Q psy14885         27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNE  106 (483)
Q Consensus        27 ~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~  106 (483)
                      ..||+||+.|+++||+++... ++|.+|+..|+++||+|++|+|.+|++||..++.    ....||||+++..       
T Consensus         3 ~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~----~~~~~WIGl~~~~-------   70 (140)
T 2ox9_A            3 NGCPPHWKNFTDKCYYFSLEK-EIFEDAKLFCEDKSSHLVFINSREEQQWIKKHTV----GRESHWIGLTDSE-------   70 (140)
T ss_dssp             -CCCTTCEEETTEEEEECSCC-BCHHHHHHHHHHTTCEECCCCSHHHHHHHHHTCC----SSSCEEEEEECSS-------
T ss_pred             CCCCcCceEcCCEEEEEECCC-cCHHHHHHHHHhcCCEEeeeCCHHHHHHHHHHhc----CCCCEEeeeEeCC-------
Confidence            579999999999999999984 9999999999999999999999999999999874    2455666666432       


Q ss_pred             CcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCc-----ccCCeEEEecccccccccccccCCCCceeeee
Q psy14885        107 DDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADN-----VQRDYLAYSFSQSLKRWGFERVTGMEPLLFIC  180 (483)
Q Consensus       107 ~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~-----~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvC  180 (483)
                                     .++.|.|+||+++.+  .+|.+ +|++.     ..++|+.+...   +.|++.+|+  ..++|||
T Consensus        71 ---------------~~~~~~W~dg~~~~~--~~W~~~~P~~~~~~~~~~~~Cv~~~~~---g~W~d~~C~--~~~~fIC  128 (140)
T 2ox9_A           71 ---------------QESEWKWLDGSPVDY--KNWKAGQPDNWGSGHGPGEDCAGLIYA---GQWNDFQCD--EINNFIC  128 (140)
T ss_dssp             ---------------STTCCEETTSCBCCS--CCBCTTCCCCTTTTTSSCCCEEEECGG---GCEEEECTT--SCBEEEE
T ss_pred             ---------------CCCceEeCCcCcCCc--cCcCCcCCCCcccCCCCCCCCceECCC---CeEeccCCC--CCceeEE
Confidence                           468899999999875  88999 99874     46899999753   369999999  9999999


Q ss_pred             ecchh
Q psy14885        181 EASIQ  185 (483)
Q Consensus       181 e~~~~  185 (483)
                      |+++.
T Consensus       129 e~~~~  133 (140)
T 2ox9_A          129 EKERE  133 (140)
T ss_dssp             EEECC
T ss_pred             eecCC
Confidence            99863

>1tdq_B Aggrecan core protein; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: d.169.1.1

Probab=99.91  E-value=1.5e-24  Score=185.90  Aligned_cols=124  Identities=19%  Similarity=0.425  Sum_probs=105.9

Q ss_pred             cCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885         26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN  105 (483)
Q Consensus        26 ~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig  105 (483)
                      ...||+||+.|+++||+++... ++|.+|+..|+.+||+|++|+|.+|++||..++.      ..||||+++..      
T Consensus         4 ~~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~------~~~WIGl~~~~------   70 (130)
T 1tdq_B            4 QEQCEEGWTKFQGHCYRHFPDR-ETWVDAERRCREQQSHLSSIVTPEEQEFVNKNAQ------DYQWIGLNDRT------   70 (130)
T ss_dssp             -CCCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHC------SCEEEEEECSS------
T ss_pred             ccCCCcccEEeCCEEEEEECCC-CCHHHHHHHHHhcCCEEeeeCCHHHHHHHHhccC------CCEEEeeecCC------
Confidence            4679999999999999999995 9999999999999999999999999999998873      35677766432      


Q ss_pred             cCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCc--ccCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885        106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADN--VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA  182 (483)
Q Consensus       106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~--~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~  182 (483)
                                      .++.|.|+||+++.+  .+|.+ +|++.  ..++|+.+..... +.|++.+|+  ..++||||+
T Consensus        71 ----------------~~~~~~W~dg~~~~~--~~W~~~~P~~~~~~~~~C~~~~~~~~-~~w~~~~C~--~~~~fICe~  129 (130)
T 1tdq_B           71 ----------------IEGDFRWSDGHSLQF--EKWRPNQPDNFFATGEDCVVMIWHER-GEWNDVPCN--YQLPFTCKK  129 (130)
T ss_dssp             ----------------STTCCEETTCCCCCC--CCBCTTCCCCCSTTTEEEEEEETTTT-TEEEEEETT--SCEEEEEEE
T ss_pred             ----------------CCCEEEecCCCcCCc--cccCCCCCCCccCCCCCeEEEccCCC-CcccCcCCC--CCeeeeeec
Confidence                            467899999999875  78999 99874  4689999975433 469999999  999999998


Q ss_pred             c
Q psy14885        183 S  183 (483)
Q Consensus       183 ~  183 (483)
                      +
T Consensus       130 ~  130 (130)
T 1tdq_B          130 G  130 (130)
T ss_dssp             C
T ss_pred             C
Confidence            4

>1j34_A Coagulation factor IX-binding protein A chain; magnesium ION, calcium ION, GLA domain, protein binding/blood clotting complex; HET: CGU; 1.55A {Trimeresurus flavoviridis} SCOP: d.169.1.1 PDB: 1bj3_A* 1j35_A* 1x2t_A* 1x2w_A 1ixx_A 1y17_A 1wt9_A 1iod_A*

Probab=99.91  E-value=1.9e-24  Score=184.95  Aligned_cols=123  Identities=21%  Similarity=0.380  Sum_probs=105.6

Q ss_pred             CCcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcCCCCC-ceeeecc--cCCCCc
Q psy14885         28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRR-KWYFGGT--QQSPNL  102 (483)
Q Consensus        28 ~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~~~~~-~~wig~~--~~~~~~  102 (483)
                      +||+||+.|++.||+++... ++|.+|+..|+.  .||+|++|+|.+|++||..++........ .||||++  +..   
T Consensus         1 ~Cp~gw~~~~~~Cy~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~~WIGl~~~~~~---   76 (129)
T 1j34_A            1 DCPSGWSSYEGHCYKPFKLY-KTWDDAERFCTEQAKGGHLVSIESAGEADFVAQLVTENIQNTKSYVWIGLRVQGKE---   76 (129)
T ss_dssp             CCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCSHHHHHHHHHHHHHHCCCTTCCEEEEEEECSSC---
T ss_pred             CCCCCcEEeCCEEEEEECCC-CCHHHHHHHHhccCCCCEECccCCHHHHHHHHHHHhhcccCCCCCEEEeeecCCCC---
Confidence            59999999999999999995 999999999999  89999999999999999999876643334 6777776  432   


Q ss_pred             ccccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeee
Q psy14885        103 WVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICE  181 (483)
Q Consensus       103 Wig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe  181 (483)
                                         .++.|.|+||+++.+  .+|.+ +|+     +|+.+....+.+.|++.+|+  ..++||||
T Consensus        77 -------------------~~~~~~W~dg~~~~~--~~W~~~~P~-----~C~~~~~~~~~~~w~~~~C~--~~~~fiCe  128 (129)
T 1j34_A           77 -------------------KQCSSEWSDGSSVSY--ENWIEAESK-----TCLGLEKETGFRKWVNIYCG--QQNPFVCE  128 (129)
T ss_dssp             -------------------SCSCCBCTTSCBCCC--CCBCGGGSC-----CEEEECGGGTTCSBEEECTT--SCEEEEEE
T ss_pred             -------------------CCCceEECCcCccce--eccCCCCCC-----cceEEEccCCCCeEccCCCC--CCCceEee
Confidence                               468899999999876  78999 997     89999876543469999999  99999999


Q ss_pred             c
Q psy14885        182 A  182 (483)
Q Consensus       182 ~  182 (483)
                      +
T Consensus       129 ~  129 (129)
T 1j34_A          129 A  129 (129)
T ss_dssp             C
T ss_pred             C
Confidence            6

>2e3x_B Coagulation factor X-activating enzyme light CHAI; disintegrin, metalloproteinase, C-type lectin, hydrolase, BL clotting, toxin; HET: NAG MAN GM6; 2.91A {Daboia russellii siamensis}

Probab=99.91  E-value=1.3e-24  Score=187.42  Aligned_cols=125  Identities=20%  Similarity=0.309  Sum_probs=105.6

Q ss_pred             CCcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcCCCCC-ceeeecc--cCCCCc
Q psy14885         28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRR-KWYFGGT--QQSPNL  102 (483)
Q Consensus        28 ~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~~~~~-~~wig~~--~~~~~~  102 (483)
                      .||+||+.|+++||+++... ++|.+|+..|++  .||+|++|+|++|++||..++........ .||||++  +..   
T Consensus         2 ~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~~WIGl~~~~~~---   77 (134)
T 2e3x_B            2 DCPPDSSLYRYFCYRVFKEH-KTWEAAERFCMEHPNNGHLVSIESMEEAEFVAKLLSNTTGKFITHFWIGLMIKDKE---   77 (134)
T ss_dssp             CCTTTSEEETTEEEEEEEEE-EEHHHHHHHHTSTTTTCCBCCCCSHHHHHHHHHHHHTCC----CEEECCEEECSSC---
T ss_pred             CCCCCCEEeCCEeeEEeCCC-cCHHHHHHHHhccCCCcEEcccCCHHHHHHHHHHHHhhccCCCCCEEEeeeecCCC---
Confidence            69999999999999999995 999999999999  89999999999999999999876543334 6677766  332   


Q ss_pred             ccccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeee
Q psy14885        103 WVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICE  181 (483)
Q Consensus       103 Wig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe  181 (483)
                                         .++.|.|+||+++.+  .+|.+ +|+     +|+.+....+.+.|++.+|+  ..++||||
T Consensus        78 -------------------~~~~~~W~dg~~~~~--~~W~~~~P~-----~C~~~~~~~~~~~w~~~~C~--~~~~~ICe  129 (134)
T 2e3x_B           78 -------------------QECSSEWSDGSSVSY--DKLGKQEFR-----KCFVLEKESGYRMWFNRNCE--ERYLFVCK  129 (134)
T ss_dssp             -------------------TTTTCCCTTSCCCCC--CCBCGGGCC-----CEEEEEGGGTTCCBEEECTT--SEEEEEEE
T ss_pred             -------------------CCCccEeCCCCcccc--cccCCCCCC-----CeEEEEecCCCCcCCCCCCC--CCcceEeC
Confidence                               468899999999876  78999 997     89999876543469999999  99999999


Q ss_pred             cch
Q psy14885        182 ASI  184 (483)
Q Consensus       182 ~~~  184 (483)
                      +++
T Consensus       130 ~~~  132 (134)
T 2e3x_B          130 VPP  132 (134)
T ss_dssp             ECC
T ss_pred             ccC
Confidence            974

>3bx4_A Aggretin alpha chain; toxin; 1.70A {Agkistrodon rhodostoma} PDB: 2vrp_A

Probab=99.91  E-value=2e-24  Score=186.76  Aligned_cols=126  Identities=17%  Similarity=0.320  Sum_probs=105.9

Q ss_pred             CCCcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcCCC-C-Cceeeecc--cCCC
Q psy14885         27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQ-R-RKWYFGGT--QQSP  100 (483)
Q Consensus        27 ~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~~~-~-~~~wig~~--~~~~  100 (483)
                      ..||+||+.|+++||+++... ++|.+|+..|+.  .||+|++|+|.+|++||..++...... . ..||||++  +.  
T Consensus         3 ~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~~~WIGl~~~~~--   79 (136)
T 3bx4_A            3 EDCDFGWSPYDQHCYQAFNEQ-KTWDEAEKFCRAQENGAHLASIESNGEADFVSWLISQKDELADEDYVWIGLRAQNK--   79 (136)
T ss_dssp             -CCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHTSTTTCEECCCCSHHHHHHHHHHHHTCGGGTTCCEEEEEEEECCC--
T ss_pred             CCCCCCCEecCCEEEEEECCC-cCHHHHHHHHhccCCCcEEcccCCHHHHHHHHHHHHhhcccCccCCEEEeeeccCC--
Confidence            469999999999999999995 999999999999  899999999999999999998654211 1 45677666  32  


Q ss_pred             CcccccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeee
Q psy14885        101 NLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFI  179 (483)
Q Consensus       101 ~~Wig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fv  179 (483)
                                          ..++.|.|+||+++.+  .+|.+ +|+     +|+.+....+.+.|++.+|+  ..++||
T Consensus        80 --------------------~~~~~~~W~dg~~~~~--~~W~~~~P~-----~C~~~~~~~~~~~W~~~~C~--~~~~fI  130 (136)
T 3bx4_A           80 --------------------EQQCSSEWSDGSSVSY--ENLIDLHTK-----KCGALEKLTGFRKWVNYYCE--QMHAFV  130 (136)
T ss_dssp             --------------------SSSSCCBCTTSCBCCC--CCCTTCCCC-----CEEEEEGGGTTTSEEEECTT--SCEEEE
T ss_pred             --------------------CCCCceEeCCCCccCc--ccccCCCCC-----ccEEEEecCCCCeEeCCCCC--CCcceE
Confidence                                2468899999999876  78999 997     89999876543469999999  999999


Q ss_pred             eecch
Q psy14885        180 CEASI  184 (483)
Q Consensus       180 Ce~~~  184 (483)
                      ||+++
T Consensus       131 Ce~~~  135 (136)
T 3bx4_A          131 CKLLP  135 (136)
T ss_dssp             EEECC
T ss_pred             EeecC
Confidence            99973

>1sb2_A Rhodocetin alpha subunit; C-type lectin, domain swapping, toxin; 1.90A {Calloselasma rhodostoma} SCOP: d.169.1.1 PDB: 3gpr_A

Probab=99.91  E-value=1.9e-24  Score=186.07  Aligned_cols=126  Identities=17%  Similarity=0.337  Sum_probs=107.6

Q ss_pred             CCcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcCCC-CCceeeecc--cCCCCc
Q psy14885         28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQ-RRKWYFGGT--QQSPNL  102 (483)
Q Consensus        28 ~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~~~-~~~~wig~~--~~~~~~  102 (483)
                      +||+||+.|++.||+++... ++|.+|+..|+.  .||+|++|+|.+|++||..++...... ...||||++  +..   
T Consensus         1 ~Cp~gw~~~~~~Cy~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~~WIGl~~~~~~---   76 (133)
T 1sb2_A            1 DCPDGWSSTKSYCYRPFKEK-KTWEEAERFCTEQEKEAHLVSMENRLEAVFVDMVMENNFENKIYRSWIGLKIENKG---   76 (133)
T ss_dssp             CCCTTCEECSSEEEEEEEEE-ECHHHHHHHHHTSSSCCEECCCSSHHHHHHHHHHHHHHTTTCCEEEEEEEEEECSS---
T ss_pred             CcCCCcEEcCCEeEEEECCc-CCHHHHHHHHhhhCCCcEEeeECCHHHHHHHHHHHHhhccCccCCEEEeeeccCCC---
Confidence            59999999999999999995 999999999999  899999999999999999998765432 466777776  432   


Q ss_pred             ccccCcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885        103 WVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA  182 (483)
Q Consensus       103 Wig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~  182 (483)
                                         .++.|.|+||+++.+  .+|.++|    .++|+.+....+.+.|++.+|+  ..++||||+
T Consensus        77 -------------------~~~~~~W~dg~~~~~--~~W~~~P----~~~C~~~~~~~~~~~w~~~~C~--~~~~fICe~  129 (133)
T 1sb2_A           77 -------------------QRSNLEWSDGSSISY--ENLYEPY----MEKCFLMDHQSGLPKWHTADCE--EKNVFMCKF  129 (133)
T ss_dssp             -------------------TTSSEEETTCCCCCC--CCBSSCC----CEEEEEEEESSSSCEEEEECTT--SCEEEEEEE
T ss_pred             -------------------CCCceEECCCCcccc--cccCcCC----CCCcEEEEecCCCCeEccCCCC--CCceeEecc
Confidence                               478899999999875  7898766    5899999876543469999999  999999999


Q ss_pred             ch
Q psy14885        183 SI  184 (483)
Q Consensus       183 ~~  184 (483)
                      ++
T Consensus       130 ~~  131 (133)
T 1sb2_A          130 QL  131 (133)
T ss_dssp             EC
T ss_pred             cC
Confidence            85

>1dv8_A Asialoglycoprotein receptor 1; C-type lectin CRD, signaling protein; 2.30A {Homo sapiens} SCOP: d.169.1.1

Probab=99.91  E-value=4e-24  Score=182.88  Aligned_cols=120  Identities=27%  Similarity=0.495  Sum_probs=101.9

Q ss_pred             CcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccCc
Q psy14885         29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDD  108 (483)
Q Consensus        29 C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~~  108 (483)
                      ||+||+.|+++||+++... ++|.+|+..|+.+||+|++|+|.+|++||..++.     ...||||+++           
T Consensus         1 Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~-----~~~~WIGl~~-----------   63 (128)
T 1dv8_A            1 CPVNWVEHERSCYWFSRSG-KAWADADNYCRLEDAHLVVVTSWEEQKFVQHHIG-----PVNTWMGLHD-----------   63 (128)
T ss_dssp             CCTTCEEETTEEEEECSSC-BCHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHC-----SSCEEEEEEC-----------
T ss_pred             CCCcceecCCEEEEEECCC-cCHHHHHHHHhhCCCEEcccCCHHHHHHHHHhhC-----CCCEEeeEEc-----------
Confidence            9999999999999999995 9999999999999999999999999999999884     2355666653           


Q ss_pred             ccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCc------ccCCeEEEecccccccccccccCCCCceeeeee
Q psy14885        109 PQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADN------VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICE  181 (483)
Q Consensus       109 ~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~------~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe  181 (483)
                                   .++.|.|+||+++.....+|.+ +|++.      +.++|+.+...   +.|++.+|+  ..++||||
T Consensus        64 -------------~~~~~~W~dg~~~~~~~~~W~~g~P~~~~~~~~~~~~~C~~~~~~---g~W~~~~C~--~~~~fICe  125 (128)
T 1dv8_A           64 -------------QNGPWKWVDGTDYETGFKNWRPEQPDDWYGHGLGGGEDCAHFTDD---GRWNDDVCQ--RPYRWVCE  125 (128)
T ss_dssp             -------------TTSSCEETTCCCSTTSCCCBCTTCCCCCCTTSSSSCCCEEEECTT---SCEEEECTT--SCBEEEEE
T ss_pred             -------------CCCcEEeCCCCcCCcccccCCCCCCCCcccccCCCCCcCceecCC---CcCCCccCC--CCcceeee
Confidence                         2578999999988311289999 99873      46899999643   369999999  99999999


Q ss_pred             cc
Q psy14885        182 AS  183 (483)
Q Consensus       182 ~~  183 (483)
                      ++
T Consensus       126 ~~  127 (128)
T 1dv8_A          126 TE  127 (128)
T ss_dssp             EE
T ss_pred             eC
Confidence            86

>3c22_A C-type lectin domain family 4 member K; coiled coil, glycoprotein, membrane, signal-anchor, transmembrane, immune system, sugar binding protein; 1.50A {Homo sapiens} PDB: 3p5g_A* 3p5d_A* 3p5f_A* 3p5e_A* 3p5h_A* 3p5i_A* 3p7g_A* 3p7f_A* 3p7h_A* 3bc7_A* 3bbs_A* 3bc6_A*

Probab=99.91  E-value=2.7e-24  Score=190.62  Aligned_cols=128  Identities=23%  Similarity=0.390  Sum_probs=106.1

Q ss_pred             cCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885         26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN  105 (483)
Q Consensus        26 ~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig  105 (483)
                      ...||+||+.|+++||+++... ++|.+|+..|+.+||+|++|+|.+|++||..++.     ...||||+++..      
T Consensus        20 ~~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~-----~~~~WIGl~~~~------   87 (156)
T 3c22_A           20 LQVVSQGWKYFKGNFYYFSLIP-KTWYSAEQFCVSRNSHLTSVTSESEQEFLYKTAG-----GLIYWIGLTKAG------   87 (156)
T ss_dssp             ----CCCCEEETTEEEEECSSC-BCHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHT-----TCCEEEEEEEET------
T ss_pred             hccCCCCCEEcCCEEEEEECCC-CCHHHHHHHHHhCCCEEeecCCHHHHHHHHHhhc-----CCcEEEeeeccC------
Confidence            5679999999999999999994 9999999999999999999999999999999873     345677666432      


Q ss_pred             cCcccccccccCCcCCCCCccccCCCCccccc--cccCCC-CCCCc-ccCCeEEEecccccccccccccCCCCceeeeee
Q psy14885        106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNEL--DAAFLP-EPADN-VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICE  181 (483)
Q Consensus       106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~--~~~w~~-~P~~~-~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe  181 (483)
                                      .++.|.|+||+++.+.  ..+|.+ +|++. +.++|+.+.... .+.|+|.+|+  ..++||||
T Consensus        88 ----------------~~~~w~W~dG~~~~~~~~~~~W~~geP~~~~~~~~Cv~~~~~~-~~~W~d~~C~--~~~~fICe  148 (156)
T 3c22_A           88 ----------------MEGDWSWVDDTPFNKVQSARFWIPGEPNNAGNNEHCGNIKAPS-LQAWNDAPCD--KTFLFICK  148 (156)
T ss_dssp             ----------------TTTEEEETTCCCCCHHHHGGGBCTTCCCCGGGCCCEEEECSSS-SSCEEEECTT--SCBEEEEE
T ss_pred             ----------------CCCceEeCCCCccccccccCcCCCCCCCCCCCCCCceEECCCC-CCcEECCCCC--CCeeEEEe
Confidence                            4688999999998751  278999 99875 468999997653 2469999999  99999999


Q ss_pred             cch
Q psy14885        182 ASI  184 (483)
Q Consensus       182 ~~~  184 (483)
                      +++
T Consensus       149 ~~~  151 (156)
T 3c22_A          149 RPY  151 (156)
T ss_dssp             EEC
T ss_pred             eCC
Confidence            985

>1oz7_A Echicetin A-chain; platelet aggregation, dimer, toxin; 2.40A {Echis carinatus} SCOP: d.169.1.1

Probab=99.91  E-value=3.1e-24  Score=184.26  Aligned_cols=128  Identities=17%  Similarity=0.303  Sum_probs=106.5

Q ss_pred             CCcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885         28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN  105 (483)
Q Consensus        28 ~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig  105 (483)
                      +||+||+.|+++||+++... ++|.+|+..|+.  .||+|++|+|.+|++||..++.........||||+++..      
T Consensus         1 ~Cp~gw~~~~~~Cy~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~WIGl~~~~------   73 (131)
T 1oz7_A            1 MCPPGWSSNGVYCYMLFKEP-KTWDEAEKFCNKQGKDGHLLSIESKKEEILVDIVVSENIGKMYKIWTGLSERS------   73 (131)
T ss_dssp             CCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCSHHHHHHHHHHHHHHSCCCSEEEEEEEECC------
T ss_pred             CcCCCcEEeCCEEEEEECCC-CCHHHHHHHHHhcCCCCEECccCCHHHHHHHHHHHHhhcCCCCCEEEeeeCCC------
Confidence            59999999999999999995 999999999999  899999999999999999998766433566777776432      


Q ss_pred             cCcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeecchh
Q psy14885        106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASIQ  185 (483)
Q Consensus       106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~~~  185 (483)
                                    ...++.|.|+||+++.+  .+|.++|+     +|+.+....+.+.|++.+|+  ..++||||++++
T Consensus        74 --------------~~~~~~~~W~dg~~~~~--~~W~~~P~-----~Cv~~~~~~~~~~w~~~~C~--~~~~fICe~~~p  130 (131)
T 1oz7_A           74 --------------KEQHCSSRWSDGSFFRS--YEIAIRYS-----ECFVLEKQSVFRTWVATPCE--NTFPFMCKYPVP  130 (131)
T ss_dssp             --------------CGGGSCCBCSSSBCCSC--CCCCCSCC-----CEEEEEGGGTTCSEEEECTT--SCEEEEEEECTT
T ss_pred             --------------CCCCCceEECCCCeecc--ccccCCCC-----CeEEEEccCCCCeEeecCCC--CCCcEEeeecCC
Confidence                          00357899999999875  78987554     99999876543469999999  999999999853

>1fvu_B Botrocetin beta chain; VON WILLBRAND factor modulator, C-type lectin, metal- binding, loop exchanged dimer, toxin; 1.80A {Bothrops jararaca} SCOP: d.169.1.1 PDB: 1ijk_C 1u0n_C 1u0o_B

Probab=99.91  E-value=1.7e-24  Score=184.25  Aligned_cols=121  Identities=21%  Similarity=0.353  Sum_probs=99.1

Q ss_pred             CCcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885         28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN  105 (483)
Q Consensus        28 ~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig  105 (483)
                      .||+||+.|+++||+++... ++|.+|+..|+.  .||+|++|+|.+|++||..++..... ...||||++         
T Consensus         1 ~Cp~gw~~~~~~Cy~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~-~~~~WIGl~---------   69 (125)
T 1fvu_B            1 DCPPDWSSYEGHCYRFFKEW-MHWDDAEEFCTEQQTGAHLVSFQSKEEADFVRSLTSEMLK-GDVVWIGLS---------   69 (125)
T ss_dssp             CCSTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCSSHHHHHHHHTTCTTSCT-TCCEECSCC---------
T ss_pred             CcCCccEEcCCEEEEEeCCC-CCHHHHHHHHhccCCCcEECccCCHHHHHHHHHHHHhcCC-CCCEEEeee---------
Confidence            59999999999999999995 999999999999  89999999999999999998864421 344555554         


Q ss_pred             cCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885        106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS  183 (483)
Q Consensus       106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~  183 (483)
                        +           ...++.|.|+||+++.+  .+|.+ +|+     +|+.+....+  .|++.+|+  ..++||||++
T Consensus        70 --~-----------~~~~~~~~W~dg~~~~~--~~w~~~~P~-----~C~~~~~~~g--~w~~~~C~--~~~~~iCe~~  124 (125)
T 1fvu_B           70 --D-----------VWNKCRFEWTDGMEFDY--DDYYLIAEY-----ECVASKPTNN--KWWIIPCT--RFKNFVCEFQ  124 (125)
T ss_dssp             --C-----------CSTTSCEEETTSCCCCC------CCSCC-----EEEEEETTTT--EEEEEETT--SCEEEEEEEC
T ss_pred             --e-----------cCCCCceEecCCCccCc--cccCCCCCC-----CceEEECCCC--cEeCCcCC--CCCcEEEeec
Confidence              3           22468899999999876  78999 986     9999986544  69999999  9999999987

>1sb2_B Rhodocetin beta subunit; C-type lectin, domain swapping, toxin; 1.90A {Calloselasma rhodostoma} SCOP: d.169.1.1 PDB: 3gpr_B

Probab=99.90  E-value=3.1e-24  Score=183.93  Aligned_cols=122  Identities=20%  Similarity=0.307  Sum_probs=104.1

Q ss_pred             CCCcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcC-CCCCceeeecccCCCCcc
Q psy14885         27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQD-PQRRKWYFGGTQQSPNLW  103 (483)
Q Consensus        27 ~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~-~~~~~~wig~~~~~~~~W  103 (483)
                      ..||+||+.|++.||+++... ++|.+|+..|++  .||+|++|+|.+|++||..++.... .....||||++       
T Consensus         2 ~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~~WiGl~-------   73 (129)
T 1sb2_B            2 FRCPTTWSASKLYCYKPFKEK-KTWIEAERFCAKQAENGHLVSIGSAAEADFLDLVIVVNFDKQRYRAWTGLT-------   73 (129)
T ss_dssp             CCCCTTCEECSSEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCSHHHHHHHHHHHHHHC---CCCEEEEEE-------
T ss_pred             CCCCCCCEEeCCEeEEEECCC-cCHHHHHHHHhhcCCCceECccCCHHHHHHHHHHHHhhcccCCCCEeEeec-------
Confidence            469999999999999999995 999999999999  8999999999999999999987653 22456666666       


Q ss_pred             cccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885        104 VNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA  182 (483)
Q Consensus       104 ig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~  182 (483)
                                         ++.|.|+||+++.+  .+|.+ +|+     +|+.+....+...|++.+|+  ..++||||+
T Consensus        74 -------------------~~~~~W~dg~~~~~--~~W~~~~P~-----~C~~~~~~~~~~~W~~~~C~--~~~~fICe~  125 (129)
T 1sb2_B           74 -------------------ERNLKWTNGASVSY--ENLYEPYIR-----KCFVVQPWEGKSKWYKADCE--EKNAFLCKF  125 (129)
T ss_dssp             -------------------ECCCBCTTSCBCCS--CCBSSCCCC-----CEEEEEEETTEEEEEEECTT--SCEEEEEEE
T ss_pred             -------------------CCccEECCCCcccc--cccCCCCCC-----CeEEEEecCCCCeEeCcCCC--CCcceEecc
Confidence                               25689999999875  78999 997     99999876543469999999  999999999


Q ss_pred             ch
Q psy14885        183 SI  184 (483)
Q Consensus       183 ~~  184 (483)
                      ++
T Consensus       126 ~~  127 (129)
T 1sb2_B          126 PK  127 (129)
T ss_dssp             EC
T ss_pred             cC
Confidence            85

>3gpr_D Rhodocetin subunit delta; disulfide bond, lectin, secreted, toxin, cell adhesion; 3.20A {Calloselasma rhodostoma}

Probab=99.90  E-value=1.8e-24  Score=183.99  Aligned_cols=121  Identities=21%  Similarity=0.377  Sum_probs=101.1

Q ss_pred             CcccccccCCeEEEEecCCCCCHHHHHHHhhhc--CCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccccc
Q psy14885         29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSL--DSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNE  106 (483)
Q Consensus        29 C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~--g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~  106 (483)
                      ||+||+.|+++||+++... ++|.+|+..|+.+  ||+||+|+|.+|++||..++..... ...+|||++          
T Consensus         1 Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~-~~~~WIGl~----------   68 (124)
T 3gpr_D            1 CPLHWSSYNGYCYRVFSEL-KTWEDAESFCYAQHKGSRLASIHSREEEAFVGKLASQTLK-YTSMWLGLN----------   68 (124)
T ss_dssp             CCSSCCCSSSEEEEEEEEE-EESHHHHHHHHHHSTTCBSCCCCSHHHHHHHHHHHHHSCS-SCCBCCSEE----------
T ss_pred             CCCcceecCCEeEEEeCCC-cCHHHHHHHHHhcCCCCEEcccCCHHHHHHHHHHHHhcCC-CCCEEEEeE----------
Confidence            9999999999999999995 9999999999999  9999999999999999999875521 134455444          


Q ss_pred             CcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885        107 DDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS  183 (483)
Q Consensus       107 ~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~  183 (483)
                       +           ...++.|.|+||+++.+  .+|.++|      +|+.+....+.+.|++.+|+  ..++||||++
T Consensus        69 -~-----------~~~~~~~~W~dg~~~~~--~~W~~~p------~C~~~~~~~~~~~W~~~~C~--~~~~fiCe~p  123 (124)
T 3gpr_D           69 -N-----------AWAACKWEWSDDAKLDY--KVWLRRA------YCAVMVVKTDRIFWYNRGCE--KTVSFLCKFY  123 (124)
T ss_dssp             -C-----------CSSCSSCSSSSCCCSCC--BCCCSCC------CEECCBCCSSSCBBCEECTT--SEEEEEEEEE
T ss_pred             -c-----------CCCCCceEECCCCcccc--cccCCCC------CcEEEEcCCCCCcEeCCCCC--CCccEEeeec
Confidence             3           22568899999999875  7897632      99999876543479999999  9999999996

>2zib_A Type II antifreeze protein; thermal hysteresis, lectin; 1.34A {Brachyopsis rostratus}

Probab=99.90  E-value=4.7e-24  Score=183.93  Aligned_cols=125  Identities=20%  Similarity=0.365  Sum_probs=108.7

Q ss_pred             cCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885         26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN  105 (483)
Q Consensus        26 ~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig  105 (483)
                      ...++.+|+.|+++||+++... ++|.+|+..|+..||+|++|+|.+|++||..++.      ..||||+++..      
T Consensus         7 ~~~~~~~~~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~------~~~WIGl~~~~------   73 (133)
T 2zib_A            7 ALVCPAGWTLHGQRCFYSEATA-MTWDLAEANCVNKGGHLASIHSLEEQLYIKDIVA------GIVWIGGSACK------   73 (133)
T ss_dssp             CCCCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHTTSEECCCCSHHHHHHHHHHCS------SCEEEEEECCS------
T ss_pred             eeeCCCCEEEeCCEEEEEECCc-cCHHHHHHHHHHCCCEECccCCHHHHHHHHHhhc------cCEEEccEecC------
Confidence            4678899999999999999995 9999999999999999999999999999999884      56777776532      


Q ss_pred             cCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecch
Q psy14885        106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASI  184 (483)
Q Consensus       106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~~  184 (483)
                                      .++.|.|+||+++.+  .+|.+ +|++..+++|+.+....+. .|++.+|+  ..++||||+++
T Consensus        74 ----------------~~~~w~W~dG~~~~y--~~W~~g~P~~~~~~~Cv~~~~~~~~-~W~d~~C~--~~~~fICe~~~  132 (133)
T 2zib_A           74 ----------------VAGAWSWTDGTPVDY--RTWCPTKPNDILSDCCMQMTAAVDK-CWDDLPCP--ASHASICAKAA  132 (133)
T ss_dssp             ----------------STTCCEETTCCCCCC--CCBCTTCCCCCTTSCEEEECSSTTC-CEEEECTT--CCEEEEEEEEC
T ss_pred             ----------------CCCceEECCCCCccc--CCcCCCCCCCCCCCCceEEecCCCC-cEeCCCCC--CCeeEEEeEcC
Confidence                            468899999999965  88999 9998656899999766443 69999999  99999999974

>3kqg_A Langerin, C-type lectin domain family 4 member K; trimer, NECK and CRD, coiled coil, immune system; 2.30A {Homo sapiens}

Probab=99.90  E-value=4.4e-24  Score=194.29  Aligned_cols=127  Identities=23%  Similarity=0.371  Sum_probs=108.2

Q ss_pred             CCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccccc
Q psy14885         27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNE  106 (483)
Q Consensus        27 ~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~  106 (483)
                      ..||+||+.|+++||+++... ++|.+|+..|+.+||+|++|+|.+|++||..++.     ...||||+++..       
T Consensus        47 ~~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~-----~~~~WIGl~~~~-------  113 (182)
T 3kqg_A           47 QVVSQGWKYFKGNFYYFSLIP-KTWYSAEQFCVSRNSHLTSVTSESEQEFLYKTAG-----GLIYWIGLTKAG-------  113 (182)
T ss_dssp             HHHTTTCEEETTEEEEECSSC-BCHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHT-----TCCEEEEEEECS-------
T ss_pred             ccCCCCCEEeCCEEEEEECCC-CCHHHHHHHHHhCCCEEeeeCCHHHHHHHHHhcC-----CCcEEEEeEccC-------
Confidence            459999999999999999995 9999999999999999999999999999998873     235677776533       


Q ss_pred             CcccccccccCCcCCCCCccccCCCCcccc---ccccCCC-CCCCcc-cCCeEEEecccccccccccccCCCCceeeeee
Q psy14885        107 DDPQRRKWYFGGTQQSPNLWVNEDGTNLNE---LDAAFLP-EPADNV-QRDYLAYSFSQSLKRWGFERVTGMEPLLFICE  181 (483)
Q Consensus       107 ~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~---~~~~w~~-~P~~~~-~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe  181 (483)
                                     .++.|.|+||+++.+   | .+|.+ +|++.+ .++|+.+...+. +.|+|.+|+  ..++||||
T Consensus       114 ---------------~~~~w~W~dG~~~~~~~~~-~~W~~geP~~~~~~~~Cv~~~~~~~-~~W~d~~C~--~~~~fICe  174 (182)
T 3kqg_A          114 ---------------MEGDWSWVDDTPFNKVQSA-RFWIPGEPNNAGNNEHCGNIKAPSL-QAWNDAPCD--KTFLFICK  174 (182)
T ss_dssp             ---------------TTCCEEETTCCCCCHHHHT-TTBCTTCCCCTTSCCCEEEECSSSS-SCEEEECTT--SCBEEEEE
T ss_pred             ---------------CCCceEeCCCCcccccccc-CCCCCCCCCCCCCCCCeeEEecCCC-CCEeCcCCC--CCeeEEec
Confidence                           468899999999873   3 88999 998754 589999976432 369999999  99999999


Q ss_pred             cchh
Q psy14885        182 ASIQ  185 (483)
Q Consensus       182 ~~~~  185 (483)
                      +++.
T Consensus       175 ~~~~  178 (182)
T 3kqg_A          175 RPYV  178 (182)
T ss_dssp             EECC
T ss_pred             cCCC
Confidence            9853

>3gpr_C Rhodocetin subunit gamma; disulfide bond, lectin, secreted, toxin, cell adhesion; 3.20A {Calloselasma rhodostoma}

Probab=99.90  E-value=2.1e-24  Score=186.14  Aligned_cols=126  Identities=16%  Similarity=0.347  Sum_probs=103.9

Q ss_pred             CCcccccccCCeEEEEecCCCCCHHHHHHHhhhc--CCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885         28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSL--DSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN  105 (483)
Q Consensus        28 ~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~--g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig  105 (483)
                      .||+||+.|+++||+++... ++|.+|+..|+++  ||+||+|+|.+|++||..++......          ....+|||
T Consensus         2 ~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~~~G~~La~i~s~~e~~~l~~~~~~~~~~----------~~~~~WIG   70 (134)
T 3gpr_C            2 NCLPGWSAYDQHCYQAFNEP-KTWDEAERFCTEQAKRGHLVSIGSDGEADFVAQLVTNNIKR----------PELYVWIG   70 (134)
T ss_dssp             CCCTTCEESSSCEEEECSCC-BCSHHHHHHHTTSSSCCEECCCCCHHHHHHHHHHHHHHHCS----------SCCBCCCS
T ss_pred             cCCCcceeeCCEEEEEeCCC-cCHHHHHHHHHhhCCCceEeeeCCHHHHHHHHHHHHhhccC----------CCCcEEEe
Confidence            59999999999999999995 9999999999998  89999999999999999998755211          01235555


Q ss_pred             cCcccccccccCCcCCCCCc-c-ccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885        106 EDDPQRRKWYFGGTQQSPNL-W-VNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA  182 (483)
Q Consensus       106 ~~~~~~~~w~~~g~~~~~~~-~-~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~  182 (483)
                      +++           ...++. | .|+||+++.+  .+|.+ +|     ++|+.+....+...|++.+|+  ..++||||+
T Consensus        71 l~~-----------~~~~~~~w~~W~dG~~~~~--~~W~~~~~-----~~Cv~~~~~~~~~~W~~~~C~--~~~~fICe~  130 (134)
T 3gpr_C           71 LRD-----------RRKEQQCSSEWSMSASIIY--VNWNTGES-----QMCQGLARWTGFRKWDYSDCQ--AKNPFVCKF  130 (134)
T ss_dssp             CBC-----------CSSTTSCSCEETTCCCSCC--BCBSSCEE-----CCEECCBCSSSSCBBCEECTT--CCBCCEEEE
T ss_pred             eEe-----------cCCCCCcCCEeCCcCcccc--cccCCCCC-----CcceEEeccCCCCcCcCCCCC--CCCcEEeCc
Confidence            544           225778 9 9999999976  78987 65     689999865543479999999  999999999


Q ss_pred             ch
Q psy14885        183 SI  184 (483)
Q Consensus       183 ~~  184 (483)
                      ++
T Consensus       131 ~~  132 (134)
T 3gpr_C          131 SS  132 (134)
T ss_dssp             CC
T ss_pred             CC
Confidence            84

>1htn_A Tetranectin; plasminogen binding, kringle 4, alpha-helical coiled coil, C-type lectin, carbohydrate recognition domain; 2.80A {Homo sapiens} SCOP: d.169.1.1 h.1.1.1

Probab=99.90  E-value=4.2e-24  Score=194.44  Aligned_cols=129  Identities=16%  Similarity=0.282  Sum_probs=110.9

Q ss_pred             cCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885         26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN  105 (483)
Q Consensus        26 ~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig  105 (483)
                      ...||.||. |+++||+++... ++|.+|+..|+..||+|++|+|.+|++||..++.........||||+++..      
T Consensus        48 ~~~Cp~gw~-~~~~CY~~~~~~-~tw~~A~~~C~~~gg~La~i~s~~e~~~l~~~~~~~~~~~~~~WIGl~~~~------  119 (182)
T 1htn_A           48 QTVCLKGTK-VHMKCFLAFTQT-KTFHEASEDCISRGGTLSTPQTGSENDALYEYLRQSVGNEAEIWLGLNDMA------  119 (182)
T ss_dssp             HHHHHHSEE-ETTEEEEEEEEE-ECHHHHHHHHHTTTCEECCCCSHHHHHHHHHHHHHHTCSSCEEEEEEECSS------
T ss_pred             cCCCCCCcE-ECCEEEEEECCC-cCHHHHHHHHhhCCCEEeeeCCHHHHHHHHHHHHhccCCCCcEEEeeECCC------
Confidence            357999999 899999999995 999999999999999999999999999999998766444567777776543      


Q ss_pred             cCcccccccccCCcCCCCCccccCCCCccccccccCC---C-CCCCcccCCeEEEecccccccccccccCCCCceeeeee
Q psy14885        106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFL---P-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICE  181 (483)
Q Consensus       106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~---~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe  181 (483)
                                      .++.|.|+||+++.+  .+|.   + +|++.+.++|+.+..... +.|+|.+|+  ..++||||
T Consensus       120 ----------------~~g~w~W~dG~~~~y--~nW~~~~~geP~~~~~~~Cv~l~~~~~-g~W~d~~C~--~~~~fICe  178 (182)
T 1htn_A          120 ----------------AEGTWVDMTGARIAY--KNWETEITAQPDGGKTENCAVLSGAAN-GKWFDKRCR--DQLPYICQ  178 (182)
T ss_dssp             ----------------STTCCBCTTSCBCCC--CCBCCSSSCSCCCTTTCCEEEEETTTT-TEEEEECTT--SCEEEEEE
T ss_pred             ----------------CCCeEEeCCCCCccC--CCCCCCCCCcCCCCCCCCCEEEccCCC-CCEECCCCC--CCeeEEEE
Confidence                            468899999999975  8999   9 999866789999975333 469999999  99999999


Q ss_pred             cc
Q psy14885        182 AS  183 (483)
Q Consensus       182 ~~  183 (483)
                      ++
T Consensus       179 ~~  180 (182)
T 1htn_A          179 FG  180 (182)
T ss_dssp             EE
T ss_pred             Ee
Confidence            97

>3alu_A Lectin CEL-IV, C-type; C-type lectin, raffinose, sugar binding protein; HET: RAF; 1.65A {Cucumaria echinata} PDB: 3als_A* 3alt_A*

Probab=99.90  E-value=2.4e-24  Score=191.25  Aligned_cols=130  Identities=19%  Similarity=0.394  Sum_probs=110.1

Q ss_pred             CCCcccccccCCeEEEEecCCCCCHHHHHHHhhh--c---------CCcccccCCHhHHHHHHHHhhhcCC----CC--C
Q psy14885         27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--L---------DSDLANVNDADEHGFIMYQLFWQDP----QR--R   89 (483)
Q Consensus        27 ~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~---------g~~L~~i~s~~e~~~l~~~~~~~~~----~~--~   89 (483)
                      ..||+||+.|+++||+++... ++|.+|+..|+.  .         ||+||+|+|.+|++||..++.....    ..  .
T Consensus         3 ~~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~~~~~~~~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~~~~~   81 (157)
T 3alu_A            3 TSCPPLWTGFNGKCFRLFHNH-LNFDNAENACRQFGLASCSGDELATGHLASIHSAESQAFLTELVKTSLPDLITGGWAP   81 (157)
T ss_dssp             CEECTTCEEETTEEEEEEEEE-ECHHHHHHHHTTEEEEETTSCEEEECEECCCCSHHHHHHHHHHHHHHCGGGCCSSSCS
T ss_pred             CCCCCCcEeeCCEEEEEECCc-cCHHHHHHHhhccccccccCCCCCCeEEcccCCHHHHHHHHHHHHhcccccccccCCC
Confidence            579999999999999999995 999999999999  8         9999999999999999999876532    12  5


Q ss_pred             ceeeecccCCCCcccccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcc-cCCeEEEecccccccccc
Q psy14885         90 KWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNV-QRDYLAYSFSQSLKRWGF  167 (483)
Q Consensus        90 ~~wig~~~~~~~~Wig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~-~~~Cv~~~~~~~~~~W~~  167 (483)
                      .||||+++..                      .++.|.|+||+++.+  .+|.+ +|++.. .++|+.+....+ +.|++
T Consensus        82 ~~WIGl~~~~----------------------~~~~w~W~dG~~~~y--~~W~~g~P~~~~~~~~Cv~~~~~~~-~~W~d  136 (157)
T 3alu_A           82 QVYIGMKVGS----------------------TNSDQTWTDGSSVDY--DGWVSGEPNNGPNSRGAIAAGDYSR-GFWAD  136 (157)
T ss_dssp             EEEEEEEECS----------------------STTCEEETTCCCCCC--CCBCTTCCCSCSSEEEEEECSTTTT-TCEEE
T ss_pred             CEEEeeeeCC----------------------CCCCeEeCCCCCCCc--cCcCCCCCCCCCCCCCeEEEecCCC-CeEcC
Confidence            5666665432                      468899999999875  88999 998753 689999976543 46999


Q ss_pred             cccCCCCceeeeeecch
Q psy14885        168 ERVTGMEPLLFICEASI  184 (483)
Q Consensus       168 ~~C~~~~~~~fvCe~~~  184 (483)
                      .+|+  ..++||||+++
T Consensus       137 ~~C~--~~~~fICe~~~  151 (157)
T 3alu_A          137 VYSN--NNFKYICQLPC  151 (157)
T ss_dssp             ECTT--CCEEEEEECCC
T ss_pred             CCCC--CccceEecccc
Confidence            9999  99999999985

>1ukm_B EMS16 B chain, EMS16 subunit B; domain swapping, C-type lectin, toxin; HET: NAG; 1.90A {Echis multisquamatus} SCOP: d.169.1.1 PDB: 1v7p_B*

Probab=99.90  E-value=6.3e-24  Score=181.61  Aligned_cols=123  Identities=17%  Similarity=0.327  Sum_probs=103.7

Q ss_pred             CcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccccc
Q psy14885         29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNE  106 (483)
Q Consensus        29 C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~  106 (483)
                      ||+||+.|+++||+++... ++|.+|+..|+.  .||+|++|+|++|++||..++..... ...||||+++..       
T Consensus         1 Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~-~~~~WiGl~~~~-------   71 (128)
T 1ukm_B            1 CPLGWSSFDQHCYKVFEPV-KNWTEAEEICMQQHKGSRLASIHSSEEEAFVSKLASKALK-FTSMWIGLNNPW-------   71 (128)
T ss_dssp             CCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCSHHHHHHHHHHHHHHCS-SCEEEEEEECTT-------
T ss_pred             CCCcCEecCCEeEEEECCc-cCHHHHHHHHhccCCccEEcccCCHHHHHHHHHHHHhcCC-cCcEEEecccCC-------
Confidence            9999999999999999995 999999999999  89999999999999999999876532 456777776432       


Q ss_pred             CcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeecchh
Q psy14885        107 DDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASIQ  185 (483)
Q Consensus       107 ~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~~~  185 (483)
                                     .++.|.|+||+++.+  .+|..+|      +|+.+....+.+.|++.+|+  ..++||||+++.
T Consensus        72 ---------------~~~~~~W~dg~~~~~--~~W~g~P------~C~~~~~~~~~~~w~~~~C~--~~~~fICe~~~~  125 (128)
T 1ukm_B           72 ---------------KDCKWEWSDNARFDY--KAWKRRP------YCTVMVVKPDRIFWFTRGCE--KSVSFVCKFLTD  125 (128)
T ss_dssp             ---------------TTCCEEETTCCCCCC--CCBCCCC------EEEEEEECSSCEEEEEEETT--SCEEEEEEEEC-
T ss_pred             ---------------CCCceEeCCCCcccc--CCCCCCC------CcEEEeCCCCCCeEeCCCCC--CCcCeEeeecCC
Confidence                           467899999999865  7786444      89999765443579999999  999999999853

>3bdw_A Natural killer cells antigen CD94; NK cells, receptor, glycoprotein, lectin, signal-A transmembrane, immune system receptor; 2.50A {Homo sapiens} SCOP: d.169.1.1 PDB: 3cdg_J 1b6e_A 3cii_G

Probab=99.90  E-value=1.7e-24  Score=183.99  Aligned_cols=120  Identities=24%  Similarity=0.480  Sum_probs=101.7

Q ss_pred             cCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885         26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN  105 (483)
Q Consensus        26 ~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig  105 (483)
                      ++.||+||+.|+++||+++... ++|.+|+..|+.+||+|++|+|++|++||..+       ...||||+++..      
T Consensus         2 c~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~-------~~~~WIGl~~~~------   67 (123)
T 3bdw_A            2 CCSCQEKWVGYRCNCYFISSEQ-KTWNESRHLCASQKSSLLQLQNTDELDFMSSS-------QQFYWIGLSYSE------   67 (123)
T ss_dssp             CCCCTTTCEEETTEEEEECSSC-BCHHHHHHHHHHTTCEECCCSCGGGGGGGTTC-------CCCEECSEEEET------
T ss_pred             CCCCCCCceEECCEEEEEeCCC-CCHHHHHHHHHHCCCeeEEECCHHHHHHHHhC-------cCCEEeeeecCC------
Confidence            5789999999999999999995 99999999999999999999999999998764       334555555432      


Q ss_pred             cCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecch
Q psy14885        106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASI  184 (483)
Q Consensus       106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~~  184 (483)
                                      .++.|.|+||+++.+  .+|.+ +|..  .++|+.+...   +.|++.+|+  ..++||||+++
T Consensus        68 ----------------~~~~w~W~dg~~~~~--~~w~~~~~~~--~~~C~~~~~~---~~w~d~~C~--~~~~fICe~~~  122 (123)
T 3bdw_A           68 ----------------EHTAWLWENGSALSQ--YLFPSFETFN--TKNCIAYNPN---GNALDESCE--DKNRYICKQQL  122 (123)
T ss_dssp             ----------------TTTEEEETTSCBCCT--TTSGGGGGCC--TTSEEEEETT---TEEEEECTT--SCBEEEEEECC
T ss_pred             ----------------CCCcEEeeCCCcCCc--ccccccCCCC--CCCCcEEcCC---CcEEccCCC--CCCeeeEeEec
Confidence                            468899999999976  78988 7754  5899999753   369999999  99999999973

>2bpd_A Dectin-1; receptor, beta-glucan, fungal recognition, C-type lectin-like domain, CTLD, carbohydrate; 1.5A {Mus musculus} PDB: 2bph_A 2bpe_A 2cl8_A*

Probab=99.90  E-value=9.2e-24  Score=184.20  Aligned_cols=128  Identities=20%  Similarity=0.335  Sum_probs=105.0

Q ss_pred             CcccCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCc
Q psy14885         23 DELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNL  102 (483)
Q Consensus        23 ~~~~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~  102 (483)
                      .+....||.||+.|+++||+++... ++|.+|+..|+++||+|++|+|.+|++||..++...  ....||||+++..   
T Consensus        11 ~~~~~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~--~~~~~WIGl~~~~---   84 (142)
T 2bpd_A           11 GGFSQSCLPNWIMHGKSCYLFSFSG-NSWYGSKRHCSQLGAHLLKIDNSKEFEFIESQTSSH--RINAFWIGLSRNQ---   84 (142)
T ss_dssp             ----CCCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHGGG--TTSEEEEEEECSS---
T ss_pred             CCCCCCCCccceecCCEEEEEECCC-CCHHHHHHHHHHcCCEEeeeCCHHHHHHHHHHHhcc--CCCCEEEEeecCC---
Confidence            3446789999999999999999994 999999999999999999999999999999998754  2456777776533   


Q ss_pred             ccccCcccccccccCCcCCCCCccccCCCCccccccccCCC--CCCC-cccCCeEEEecccccccccccccCCCCceeee
Q psy14885        103 WVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP--EPAD-NVQRDYLAYSFSQSLKRWGFERVTGMEPLLFI  179 (483)
Q Consensus       103 Wig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~--~P~~-~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fv  179 (483)
                                         .++.|.|+||+++.+  .+|..  +|++ .+.++|+.+..    +.|++.+|+  ..++||
T Consensus        85 -------------------~~~~w~W~dg~~~~~--~~w~~~~~~~~~~~~~~Cv~~~~----~~W~d~~C~--~~~~fI  137 (142)
T 2bpd_A           85 -------------------SEGPWFWEDGSAFFP--NSFQVRNAVPQESLLHNCVWIHG----SEVYNQICN--TSSYSI  137 (142)
T ss_dssp             -------------------TTSCCEETTSCBCCS--SSCCEECCCCSCCSCCCEEEEET----TEEEEECTT--SCEEEE
T ss_pred             -------------------CCCCeEeCCCCcccc--ccccccCCCCCCCCCCCCcEEcC----CeEECcCCC--CCceee
Confidence                               467899999999876  67876  3433 24689999963    369999999  999999


Q ss_pred             eecc
Q psy14885        180 CEAS  183 (483)
Q Consensus       180 Ce~~  183 (483)
                      ||++
T Consensus       138 Ce~~  141 (142)
T 2bpd_A          138 CEKE  141 (142)
T ss_dssp             EEEC
T ss_pred             eeee
Confidence            9986

>1jwi_B Platelet aggregation inducer; domain swapping, C-type lectin, toxin; 2.00A {Bitis arietans} SCOP: d.169.1.1 PDB: 1uex_B

Probab=99.90  E-value=5.3e-24  Score=181.42  Aligned_cols=120  Identities=22%  Similarity=0.287  Sum_probs=102.3

Q ss_pred             CCCcccccccCCeEEEEecCCCCCHHHHHHHhh--hcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccc
Q psy14885         27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCK--SLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV  104 (483)
Q Consensus        27 ~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~--~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wi  104 (483)
                      ..||+||+.|+++||+++... ++|.+|+..|+  ..||+|++|+|++|++||..++.... ....||||+++..     
T Consensus         2 ~~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~-~~~~~WiGl~~~~-----   74 (125)
T 1jwi_B            2 EGCLPDWSSYKGHCYKVFKVE-KTWADAEKFCKELVNGGHLMSVNSREEGEFISKLALEKM-RIVLVWIGLSHFW-----   74 (125)
T ss_dssp             -CCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCSHHHHHHHHHHHHHTT-CCCEEEEEEEECG-----
T ss_pred             CCCCCCCEecCCEEEEEECCC-cCHHHHHHHhhccCCCceECccCCHHHHHHHHHHHHhcC-CCCCEEEeeecCC-----
Confidence            479999999999999999995 99999999999  89999999999999999999987542 2456677766432     


Q ss_pred             ccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885        105 NEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS  183 (483)
Q Consensus       105 g~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~  183 (483)
                                       .++.|.|+||+++.+  .+|.+ +|       |+.+....  +.|++.+|+  ..++||||++
T Consensus        75 -----------------~~~~~~W~dg~~~~~--~~W~~g~p-------C~~~~~~~--~~W~~~~C~--~~~~~iCe~~  124 (125)
T 1jwi_B           75 -----------------RICPLRWTDGARLDY--RALSDEPI-------CFVAESFH--NKWIQWTCN--RKKSFVCKYR  124 (125)
T ss_dssp             -----------------GGSCEEETTCCCCCS--CCSCCSCE-------EEEEETTT--CCEEEEETT--SCEEEEEEEE
T ss_pred             -----------------CCCceEeeCcCcCcc--CCcCCCCC-------eEEEECCC--CeEecCCCC--CCCcEEEeEe
Confidence                             367899999999875  78988 76       99997643  369999999  9999999986

>2ls8_A C-type lectin domain family 4 member D; structural genomics, NEW YORK structural genomics research consortium, nysgrc, PSI-biology, immune system; NMR {Homo sapiens}

Probab=99.83  E-value=1.5e-25  Score=198.80  Aligned_cols=130  Identities=20%  Similarity=0.397  Sum_probs=108.4

Q ss_pred             CCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccC
Q psy14885         28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNED  107 (483)
Q Consensus        28 ~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~  107 (483)
                      .||+||+.|+++||+++... ++|.+|+..|+++||+|++|+|.+|++||..++..    ...||||+++.         
T Consensus         2 ~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~----~~~~WIGl~~~---------   67 (156)
T 2ls8_A            2 VCPIDWRAFQSNCYFPLTDN-KTWAESERNCSGMGAHLMTISTEAEQNFIIQFLDR----RLSYFLGLRDE---------   67 (156)
Confidence            59999999999999999995 99999999999999999999999999999998852    23345555432         


Q ss_pred             cccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecchhh
Q psy14885        108 DPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASIQK  186 (483)
Q Consensus       108 ~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~~~~  186 (483)
                                   ..++.|.|+||+++.....+|.+ +|++.+.++|+.+....+...|+|.+|+  ..++||||+++..
T Consensus        68 -------------~~~~~w~W~dG~~~~~~~~~W~~g~P~~~~~~~Cv~l~~~~~~~~W~d~~C~--~~~~fICe~~~~~  132 (156)
T 2ls8_A           68 -------------NAKGQWRWVDQTPFNPRRVFWHKNEPDNSQGENCVVLVYNQDKWAWNDVPCN--FEASRICKIPGTT  132 (156)
Confidence                         24688999999988532288999 9998667899999766543469999999  9999999998643

>2vuv_A Codakine; sugar-binding protein, C-type, lectin, mannose, invertebrate; HET: CIT; 1.3A {Codakia orbicularis} PDB: 2vuz_A*

Probab=99.90  E-value=6e-24  Score=182.08  Aligned_cols=123  Identities=22%  Similarity=0.478  Sum_probs=104.9

Q ss_pred             CCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCce--eeecccCCCCcccc
Q psy14885         28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKW--YFGGTQQSPNLWVN  105 (483)
Q Consensus        28 ~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~--wig~~~~~~~~Wig  105 (483)
                      +||+||+.|++.||+++... ++|.+|+..|+++||+|++|+|++|++||..++..... ...+  ||| .         
T Consensus         1 ~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~~~-~~~~~~WiG-~---------   68 (129)
T 2vuv_A            1 GCPDGWTQFLDLCYIYQSAK-ASWASAQSSCQALGGILAEPDTACENEVLIHMCKENGD-AGSFGPWLG-G---------   68 (129)
T ss_dssp             CCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHTTSEECCCCSHHHHHHHHHHHHHTTC-CSSSCCEEE-E---------
T ss_pred             CCCcchhhhCCEEEEEECCC-cCHHHHHHHHHhcCCEECccCCHHHHHHHHHHHHhccC-CCCcccccC-C---------
Confidence            59999999999999999995 99999999999999999999999999999999876532 2344  555 1         


Q ss_pred             cCcccccccccCCcCCCCCccccCC-CCccccccccCCC-CCCCc-ccCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885        106 EDDPQRRKWYFGGTQQSPNLWVNED-GTNLNELDAAFLP-EPADN-VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA  182 (483)
Q Consensus       106 ~~~~~~~~w~~~g~~~~~~~~~W~d-g~~~~~~~~~w~~-~P~~~-~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~  182 (483)
                                    ...++.|.|+| |+++.+  .+|.+ +|++. +.++|+.+...+    |++.+|+  ..++||||+
T Consensus        69 --------------~~~~~~~~W~d~g~~~~~--~~W~~~~P~~~~~~~~C~~~~~~~----w~~~~C~--~~~~~ICe~  126 (129)
T 2vuv_A           69 --------------QKVGGAWQWSSSGAAFDY--LRWGPNEPNNSGGNEDCLHYNWLS----WNDLRCH--YQASYLCQR  126 (129)
T ss_dssp             --------------EEETTEEEETTTCCBCSS--CCBCTTCSCCTTSCCCEEEEETTE----EEEECTT--SCEEEEEEE
T ss_pred             --------------CCCCCeEEEcCCCCcccc--CCcCCCCCCCCCCCCCccEEcCCc----ccCCCCC--CCcceEeee
Confidence                          12468899999 999965  88999 99875 368999997642    9999999  999999999


Q ss_pred             ch
Q psy14885        183 SI  184 (483)
Q Consensus       183 ~~  184 (483)
                      ++
T Consensus       127 ~~  128 (129)
T 2vuv_A          127 AA  128 (129)
T ss_dssp             EC
T ss_pred             cC
Confidence            74

>2b6b_D CD209 antigen; cryo EM dengue CRD DC-SIGN, icosahedral virus, virus-recepto; 25.00A {Homo sapiens} SCOP: d.169.1.1

Probab=99.90  E-value=1.4e-23  Score=189.57  Aligned_cols=130  Identities=22%  Similarity=0.439  Sum_probs=108.6

Q ss_pred             cccCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcc
Q psy14885         24 ELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLW  103 (483)
Q Consensus        24 ~~~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~W  103 (483)
                      ..+..||.||+.|+++||+++... ++|.+|+..|+.+||+|++|+|.+|++||..++..   ....||||+++..    
T Consensus        22 ~~~~~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~fl~~~~~~---~~~~~WIGl~~~~----   93 (175)
T 2b6b_D           22 RLCHPCPWEWTFFQGNCYFMSNSQ-RNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSR---SNRFTWMGLSDLN----   93 (175)
T ss_pred             cccCCCCcCcEEeCCEEEEEECCc-cCHHHHHHHHhhCCCEEeeeCCHHHHHHHHHHhcc---CCCcEEEeeEccC----
Confidence            336789999999999999999995 99999999999999999999999999999987642   2345666665432    


Q ss_pred             cccCcccccccccCCcCCCCCccccCCCCccccc-cccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeee
Q psy14885        104 VNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNEL-DAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICE  181 (483)
Q Consensus       104 ig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~-~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe  181 (483)
                                        .++.|.|+||+++.+. ..+|.+ +|++.+.++|+.+...    .|++.+|+  ..++||||
T Consensus        94 ------------------~~~~w~W~dGs~~~~~~~~~W~~geP~~~~~~~Cv~~~~~----gW~d~~C~--~~~~fICe  149 (175)
T 2b6b_D           94 ------------------QEGTWQWVDGSPLLPSFKQYWNRGEPNNVGEEDCAEFSGN----GWNDDKCN--LAKFWICK  149 (175)
T ss_pred             ------------------CCCcEEeCCCCCcccccccCCCCCCCCCCCCCCeeEEcCC----ceEccCCC--CCeeEEEE
Confidence                              4688999999988741 268999 9988767899999653    29999999  99999999


Q ss_pred             cchh
Q psy14885        182 ASIQ  185 (483)
Q Consensus       182 ~~~~  185 (483)
                      ++..
T Consensus       150 ~~~~  153 (175)
T 2b6b_D          150 KSAA  153 (175)
T ss_pred             ECCC
Confidence            9853

>3rs1_A C-type lectin domain family 2 member I; C-type lectin-like, ligand of NK receptor, natural killer CE receptors, surface of activated T lymphocytes; 1.94A {Mus musculus}

Probab=99.90  E-value=1.9e-23  Score=177.25  Aligned_cols=118  Identities=19%  Similarity=0.291  Sum_probs=100.5

Q ss_pred             ccCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccc
Q psy14885         25 LELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV  104 (483)
Q Consensus        25 ~~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wi  104 (483)
                      ....||+||+.|+++||+++... ++|.+|+..|+.+||+||+|++++|++||..++.     ...||||+++..     
T Consensus         4 ~~~~Cp~gw~~~~~~Cy~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~-----~~~~WIGl~~~~-----   72 (122)
T 3rs1_A            4 TYAACSKNWTGVGNKCFYFSGYP-RNWTFAQAFCMAQEAQLARFDNEEELIFLKRFKG-----DFDSWIGLHRES-----   72 (122)
T ss_dssp             SSSSCCTTCEEETTEEEEECSSC-BCHHHHHHHHHHTTCEECCCSSHHHHHHHHHHTT-----TSCEEEEEECSS-----
T ss_pred             ccCCCChhheecCCEEEEEECCc-cCHHHHHHHHHhcCCEEeeeCCHHHHHHHHHhcC-----CCCEEEEEEecC-----
Confidence            46789999999999999999995 9999999999999999999999999999999873     345677776543     


Q ss_pred             ccCcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885        105 NEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS  183 (483)
Q Consensus       105 g~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~  183 (483)
                                       .++.|.|+||+++.+  .+|.     .+.++|+.+...    .|++.+|.  ..++||||+|
T Consensus        73 -----------------~~~~w~W~dg~~~~~--~~w~-----~~~~~C~~~~~~----~w~~~~C~--~~~~fICekp  121 (122)
T 3rs1_A           73 -----------------SEHPWKWTNNTEYNN--MNPI-----LGVGRYAYLSSD----RISSSRSY--INRMWICSKL  121 (122)
T ss_dssp             -----------------TTSCCEETTCCBCCC--CSCC-----CSSCSEEEEETT----EEEEECSC--SCBCBEEEEE
T ss_pred             -----------------CCCceECCCCCcCCc--cccC-----CCCCceEEEeCC----cEeccccC--CCCCeeeecC
Confidence                             468899999999876  6673     235789999653    49999999  9999999997

>1j34_B Coagulation factor IX-binding protein B chain; magnesium ION, calcium ION, GLA domain, protein binding/blood clotting complex; HET: CGU; 1.55A {Trimeresurus flavoviridis} SCOP: d.169.1.1 PDB: 1bj3_B 1ixx_B* 1j35_B* 1x2t_B* 1x2w_B 1wt9_B 1iod_B 1y17_B

Probab=99.90  E-value=7.7e-24  Score=179.78  Aligned_cols=120  Identities=20%  Similarity=0.431  Sum_probs=100.7

Q ss_pred             CCcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885         28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN  105 (483)
Q Consensus        28 ~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig  105 (483)
                      +||+||+.|+++||+++... ++|.+|+..|+.  .||+|++|+|.+|++||..++..... ...||||+++.       
T Consensus         1 ~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~-~~~~WIGl~~~-------   71 (123)
T 1j34_B            1 DCPSDWSSYEGHCYKPFSEP-KNWADAENFCTQQHAGGHLVSFQSSEEADFVVKLAFQTFG-HSIFWMGLSNV-------   71 (123)
T ss_dssp             CCCTTSEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCSSHHHHHHHHHHHHHHHC-SCEEECSCCSC-------
T ss_pred             CcCCcccccCCEEEEEECCC-cCHHHHHHHHhccCCCcEEcccCCHHHHHHHHHHHHhcCC-CCCEEEeeEcC-------
Confidence            59999999999999999995 999999999999  89999999999999999998875421 34555555432       


Q ss_pred             cCcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885        106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS  183 (483)
Q Consensus       106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~  183 (483)
                                     ..++.|.|+||+++.+  .+|..+|      +|+.+....+  .|++.+|+  ..++||||++
T Consensus        72 ---------------~~~~~~~W~dg~~~~~--~~W~g~P------~C~~~~~~~g--~w~~~~C~--~~~~~iCe~~  122 (123)
T 1j34_B           72 ---------------WNQCNWQWSNAAMLRY--KAWAEES------YCVYFKSTNN--KWRSRACR--MMAQFVCEFQ  122 (123)
T ss_dssp             ---------------STTSCEEETTCCCCCC--CCBSCSC------EEEEEETTSC--CBEEEETT--SCEEEEEEEE
T ss_pred             ---------------CCCCeeEeCCCCCcCc--cCcCCCC------CcEEEECCCC--CCcCCCCC--CCCcEEEeec
Confidence                           2478899999999865  7786444      8999986544  69999999  9999999987

>1umr_C Convulxin beta, CVX beta; lectin, C-type lectin, platelet, sugar-binding protein, activator, snake venom; 2.40A {Crotalus durissus terrificus} SCOP: d.169.1.1 PDB: 1uos_B

Probab=99.90  E-value=1.1e-23  Score=179.25  Aligned_cols=121  Identities=21%  Similarity=0.418  Sum_probs=101.4

Q ss_pred             CCCcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccc
Q psy14885         27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV  104 (483)
Q Consensus        27 ~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wi  104 (483)
                      ..||+||+.|+++||+++... ++|.+|+..|++  .||+|++|+|.+|++||..++..... ...||||+++.      
T Consensus         2 ~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~-~~~~WIGl~~~------   73 (125)
T 1umr_C            2 FCCPSHWSSYDRYCYKVFKQE-MTWADAEKFCTQQHTGSHLVSFHSTEEVDFVVKMTHQSLK-STFFWIGANNI------   73 (125)
T ss_dssp             CCCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCSSHHHHHHHHHHHHTTCS-SSEEECSCCCT------
T ss_pred             CCCCCCCEEcCCEeEEEECCC-cCHHHHHHHHhccCCcceECccCCHHHHHHHHHHHHhcCC-CCCEEEeeEeC------
Confidence            469999999999999999995 999999999999  89999999999999999999875432 34555555432      


Q ss_pred             ccCcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885        105 NEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS  183 (483)
Q Consensus       105 g~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~  183 (483)
                                      ..++.|.|+||+++.+  .+|..+|      +|+.+....+  .|++.+|+  ..++||||++
T Consensus        74 ----------------~~~~~~~W~dg~~~~~--~~W~g~P------~C~~~~~~~g--~w~~~~C~--~~~~fICe~~  124 (125)
T 1umr_C           74 ----------------WNKCNWQWSDGTKPEY--KEWHEEF------ECLISRTFDN--QWLSAPCS--DTYSFVCKFE  124 (125)
T ss_dssp             ----------------TTSSCEEETTSCCCSS--CCBCCCC------EEEEEESSCS--CEEEEETT--SCEEEEEEEE
T ss_pred             ----------------CCCCeeEeCCcCccCc--ccCCCCC------CcEEEECCCC--cEeCCCCC--CCcceEEeec
Confidence                            2468899999999875  7787444      8999976543  69999999  9999999987

>1sl6_A C-type lectin DC-signr; sugar binding protein; HET: GAL NDG FUC; 2.25A {Homo sapiens} SCOP: d.169.1.1 PDB: 1xar_A

Probab=99.90  E-value=1.7e-23  Score=190.65  Aligned_cols=127  Identities=22%  Similarity=0.469  Sum_probs=108.2

Q ss_pred             cCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885         26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN  105 (483)
Q Consensus        26 ~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig  105 (483)
                      +..||.||+.|+++||+++... ++|.+|+..|+++||+|++|+|.+|++||..++..   ....||||+++..      
T Consensus        50 ~~~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~fl~~~~~~---~~~~~WIGl~~~~------  119 (184)
T 1sl6_A           50 CRHCPKDWTFFQGNCYFMSNSQ-RNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSR---SNRFSWMGLSDLN------  119 (184)
T ss_dssp             CCBCCTTCEEETTEEEEECSSC-BCHHHHHHHHHTTTCEECCCCSHHHHHHHHHHHHH---TTCCEEEEEECCS------
T ss_pred             CCCCCCCcEEECCEEEEEECCC-CCHHHHHHHHHhcCCEEEEeCCHHHHHHHHHHhcc---CCccEEEEEEccC------
Confidence            5789999999999999999995 99999999999999999999999999999987643   2345666666432      


Q ss_pred             cCcccccccccCCcCCCCCccccCCCCcccc-ccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885        106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNE-LDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS  183 (483)
Q Consensus       106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~-~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~  183 (483)
                                      .++.|.|+||+++.+ +..+|.+ +|++.+.++|+.+...    .|++.+|+  ..++||||++
T Consensus       120 ----------------~~~~w~W~DGs~~~~~~~~~W~~geP~~~~~~~Cv~~~~~----gW~d~~C~--~~~~fICe~~  177 (184)
T 1sl6_A          120 ----------------QEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCAEFSGS----GWNDNRCD--VDNYWICKKP  177 (184)
T ss_dssp             ----------------STTCCEETTSCBCCGGGGGGBCTTCCCCTTSCCEEEEETT----EEEEECTT--SCBEEEEEEE
T ss_pred             ----------------CCCCeEecCCCccCCcccCCCCCCCCCCCCCCCceEEeCC----cEEccCCC--CCeeEEEeEC
Confidence                            468899999999874 1268999 9998767899999753    39999999  9999999998


Q ss_pred             h
Q psy14885        184 I  184 (483)
Q Consensus       184 ~  184 (483)
                      +
T Consensus       178 ~  178 (184)
T 1sl6_A          178 A  178 (184)
T ss_dssp             C
T ss_pred             C
Confidence            5

>2yhf_A C-type lectin domain family 5 member A; immune system; 1.90A {Homo sapiens}

Probab=99.90  E-value=8.8e-24  Score=178.15  Aligned_cols=117  Identities=19%  Similarity=0.348  Sum_probs=99.5

Q ss_pred             CCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccC
Q psy14885         28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNED  107 (483)
Q Consensus        28 ~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~  107 (483)
                      +||+||+.|+++||+++... ++|.+|+..|+.+||+|++|+|++|++||..++.     ...||||+++..        
T Consensus         1 ~Cp~gw~~~~~~Cy~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~-----~~~~WIGl~~~~--------   66 (118)
T 2yhf_A            1 MCPKDWEFYQARCFFLSTSE-SSWNESRDFCKGKGSTLAIVNTPEKLKFLQDITD-----AEKYFIGLIYHR--------   66 (118)
T ss_dssp             CCCTTCEEETTEEEEECSSC-BCHHHHHHHHHTTTCEECCCCSHHHHHHHHHHHC-----SSCEEEEEEEET--------
T ss_pred             CCCCCcEEeCCEEEEEeCCC-CCHHHHHHHHhhcCCEEEEeCCHHHHHHHHHhhC-----CCcEEEeccccC--------
Confidence            59999999999999999995 9999999999999999999999999999999873     346677765432        


Q ss_pred             cccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecch
Q psy14885        108 DPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASI  184 (483)
Q Consensus       108 ~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~~  184 (483)
                                    .++.|.|+||+++    .+|.+ +|+   +++|+.+...   +.|++.+|+  ..++||||+++
T Consensus        67 --------------~~~~w~W~dg~~~----~~~~~~~~~---~~~C~~~~~~---~~w~~~~C~--~~~~fICe~~a  118 (118)
T 2yhf_A           67 --------------EEKRWRWINNSVF----NGNVTNQNQ---NFNCATIGLT---KTFDAASCD--ISYRRICEKNA  118 (118)
T ss_dssp             --------------TTTEEEETTTEEC----CSCEESCCT---TCCEEEESSS---SSEEEECTT--SCBEEEEEEEC
T ss_pred             --------------CCCcEEEeCCCcC----CCCccCCCC---CCCeeEEcCC---CcCccccCC--CCceeeecccC
Confidence                          4678999999986    45877 775   4899999653   359999999  99999999873

>1oz7_B Echicetin B-chain; platelet aggregation, dimer, toxin; 2.40A {Echis carinatus} SCOP: d.169.1.1

Probab=99.90  E-value=7.8e-24  Score=179.72  Aligned_cols=120  Identities=23%  Similarity=0.416  Sum_probs=101.7

Q ss_pred             CCcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885         28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN  105 (483)
Q Consensus        28 ~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig  105 (483)
                      +||+||+.|+++||+++... ++|.+|+..|+.  .||+|++|+|.+|++||..++..... ...+|||+++..      
T Consensus         1 ~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~-~~~~WIGl~~~~------   72 (123)
T 1oz7_B            1 NCLPDWSVYEGYCYKVFKER-MNWADAEKFCTKQHKDGHLVSFRNSKEVDFVISLAFPMLK-NDLVWIGLTDYW------   72 (123)
T ss_dssp             CCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCCSSHHHHHHHTSSTTTT-CSEEEEEEECCC------
T ss_pred             CCCCCcEEcCCEEEEEECCc-cCHHHHHHHHhccCCCcEECCcCCHHHHHHHHHHHHhcCC-CCCEEEeeeeCC------
Confidence            59999999999999999995 999999999999  89999999999999999998865432 456677776432      


Q ss_pred             cCcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885        106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS  183 (483)
Q Consensus       106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~  183 (483)
                                      .++.|.|+||+++.+  .+|..+|      +|+.+....+  .|++.+|+  ..++||||++
T Consensus        73 ----------------~~~~~~W~dg~~~~~--~~W~g~P------~C~~~~~~~g--~w~~~~C~--~~~~~ICe~~  122 (123)
T 1oz7_B           73 ----------------RDCNWEWSDGAQLDY--KAWDNER------HCFIYKNTDN--QWTRRDCT--WTFSFVCKCP  122 (123)
T ss_dssp             ----------------CGGGEEETTCCCCCS--CCBCSST------TEEEEEGGGT--EEEEECTT--SCEEEEEEEE
T ss_pred             ----------------CCCCEEEcCCCcccc--cCCCCCC------CeEEEECCCC--cEeCCCCC--CCeeEEEeEe
Confidence                            467899999999875  7786444      9999976543  69999999  9999999987

>2e3x_C Coagulation factor X-activating enzyme light CHAI; disintegrin, metalloproteinase, C-type lectin, hydrolase, BL clotting, toxin; HET: NAG MAN GM6; 2.91A {Daboia russellii siamensis}

Probab=99.90  E-value=1.6e-23  Score=177.49  Aligned_cols=119  Identities=18%  Similarity=0.271  Sum_probs=101.1

Q ss_pred             CCcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885         28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN  105 (483)
Q Consensus        28 ~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig  105 (483)
                      .||+||+.|++.||+++... ++|.+|+..|+.  .||+|++|+|++|++||..++..... ...||||+++..      
T Consensus         2 ~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~-~~~~WIGl~~~~------   73 (122)
T 2e3x_C            2 DCPSGWLSYEQHCYKGFNDL-KNWTDAEKFCTEQKKGSHLVSLHSREEEKFVVNLISENLE-YPATWIGLGNMW------   73 (122)
T ss_dssp             CCCSSCEEETTEEEEECCCC-BCHHHHHHHHHHHSTTCCBCCCSSHHHHHHHHHHHHHHCS-SSEEEEEEESTT------
T ss_pred             CCCcchhhhCCEeEEEECCC-cCHHHHHHHHhccCCCCEECccCCHHHHHHHHHHHHhcCC-CCCEEEeeeecC------
Confidence            69999999999999999995 999999999999  89999999999999999999876532 456777776432      


Q ss_pred             cCcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885        106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA  182 (483)
Q Consensus       106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~  182 (483)
                                      .++.|.|+||+++.+  .+|..+|      +|+.+....+  .|++.+|+  ..++||||+
T Consensus        74 ----------------~~~~~~W~dg~~~~~--~~W~~~P------~C~~~~~~~g--~w~~~~C~--~~~~~ICe~  122 (122)
T 2e3x_C           74 ----------------KDCRMEWSDRGNVKY--KALAEES------YCLIMITHEK--VWKSMTCN--FIAPVVCKF  122 (122)
T ss_dssp             ----------------SSSCEEETTSCCCCC--CCBCSCC------EEEEEETTTC--CEEEEETT--SCBCCEEC-
T ss_pred             ----------------CCCceEeCCCCcccc--cccCCCC------CCEEEECCCC--cEeCCCCC--CCCceeecC
Confidence                            468899999999875  7787444      8999976544  69999999  999999996

>3ubu_B Agglucetin subunit beta-2; platelet inhibiting, agkisacucetin, dimer, toxin, C-type LEC GPIB inhibitor, GPIB binding; 1.91A {Deinagkistrodon acutus}

Probab=99.89  E-value=1.3e-23  Score=179.01  Aligned_cols=122  Identities=22%  Similarity=0.368  Sum_probs=104.1

Q ss_pred             CCCcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccc
Q psy14885         27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV  104 (483)
Q Consensus        27 ~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wi  104 (483)
                      ..||+||+.|+++||+++... ++|.+|+..|+.  .||+||+|+|++|++||..++..... ...||||+++..     
T Consensus         2 ~~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~-~~~~WIGl~~~~-----   74 (126)
T 3ubu_B            2 FCCPLRWSAYEGHCYLVVKEK-KTWDDAEKFCTEQRKGGHLVSVHSREEADFLVHLAYPILD-LSLIWMGLSNMW-----   74 (126)
T ss_dssp             CSCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCSHHHHHHHHHHHHHHHC-SCEEEEEEECTT-----
T ss_pred             CCCCCCCeEcCCEeEEEeCCC-CCHHHHHHHHhccCCCcEECccCCHHHHHHHHHHHhhccC-CCcEEEeEEcCC-----
Confidence            469999999999999999995 999999999999  99999999999999999999876421 236677776532     


Q ss_pred             ccCcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885        105 NEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS  183 (483)
Q Consensus       105 g~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~  183 (483)
                                       .++.|.|+||+++.+  .+|.+      .++|+.+....+ ..|++.+|+  ..++||||++
T Consensus        75 -----------------~~~~~~W~dg~~~~~--~~W~~------~~~Cv~~~~~~~-~~W~~~~C~--~~~~fICe~~  125 (126)
T 3ubu_B           75 -----------------NDCKREWSDGTKLDF--KSWAK------TSDCLIGKTDGD-NQWLNMDCS--KKHYFVCKFK  125 (126)
T ss_dssp             -----------------TSSEEEETTCCCCCC--CCBCC------CCCEEEEESSTT-CCEEEECTT--SCEEEEEEEE
T ss_pred             -----------------CCCceEecCCCeeee--eccCC------CCCeEEEecCCC-CcCcCCCCC--CCceeEEeee
Confidence                             468899999999875  78964      589999987654 469999999  9999999997

>1c3a_B Flavocetin-A: beta subunit; C-type lectin-like domains, membrane protein; 2.50A {Trimeresurus flavoviridis} SCOP: d.169.1.1 PDB: 1v4l_B

Probab=99.89  E-value=1.2e-23  Score=179.08  Aligned_cols=121  Identities=19%  Similarity=0.342  Sum_probs=101.0

Q ss_pred             CCCcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccc
Q psy14885         27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV  104 (483)
Q Consensus        27 ~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wi  104 (483)
                      ..||+||+.|++.||+++... ++|.+|+..|++  .||+|++|+|.+|++||..++..... ...||||+++.      
T Consensus         2 ~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~-~~~~WIGl~~~------   73 (125)
T 1c3a_B            2 FCCPLGWSSYDEHCYQVFQQK-MNWEDAEKFCTQQHKGSHLVSFHSSEEVDFVTSKTFPILK-YDFVWIGLSNV------   73 (125)
T ss_dssp             CCCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCSSHHHHHHHHHHHHHHHC-SCEEECSCCCT------
T ss_pred             CCCCCcceecCCEEEEEECCC-CCHHHHHHHhhccCCCcEECccCCHHHHHHHHHHHHhcCC-CCCEEEeeEcC------
Confidence            469999999999999999995 999999999999  89999999999999999998865421 34555555432      


Q ss_pred             ccCcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885        105 NEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS  183 (483)
Q Consensus       105 g~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~  183 (483)
                                      ..++.|.|+||+++.+  .+|..+|      +|+.+....+  .|++.+|+  ..++||||++
T Consensus        74 ----------------~~~~~~~W~dg~~~~~--~~w~~~P------~C~~~~~~~g--~w~~~~C~--~~~~fiCe~~  124 (125)
T 1c3a_B           74 ----------------WNECTKEWSDGTKLDY--KAWSGGS------DCIVSKTTDN--QWLSMDCS--SKYYVVCKFQ  124 (125)
T ss_dssp             ----------------TTSSCEEETTCCCCCS--CCBCCCC------EEEEEESSSS--CEEEEETT--SCEEEEEEEE
T ss_pred             ----------------CCCCceEeCCCCcccc--cccCCCC------CcEEEECCCC--CEeCCCCC--CCCeeEEeee
Confidence                            2468899999999875  7786444      8999976544  69999999  9999999987

>1hq8_A NKG2-D; homodimer, CIS-proline, apoptosis; 1.95A {Mus musculus} SCOP: d.169.1.1 PDB: 1jsk_A 1kcg_A*

Probab=99.89  E-value=3.4e-24  Score=182.13  Aligned_cols=118  Identities=25%  Similarity=0.426  Sum_probs=101.8

Q ss_pred             cCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885         26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN  105 (483)
Q Consensus        26 ~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig  105 (483)
                      +..||+||+.|+++||+++... ++|.+|+..|+++||+|++|+|++|++||..+.       ..||||+++..      
T Consensus         3 c~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~fl~~~~-------~~~WIGl~~~~------   68 (123)
T 1hq8_A            3 CGPCPNNWICHRNNCYQFFNEE-KTWNQSQASCLSQNSSLLKIYSKEEQDFLKLVK-------SYHWMGLVQIP------   68 (123)
T ss_dssp             CCCCSTTCEEETTEEEEEEEEE-ECHHHHHHHHHTTTCEECCCSCTTTTGGGGGCC-------SCEEEEEEECT------
T ss_pred             CCCCCcccEEcCCEEEEEeCCc-cCHHHHHHHHHhcCCEecccCCHHHHHHHHhcc-------CCEEEEeeecC------
Confidence            6789999999999999999995 999999999999999999999999999997531       35666665432      


Q ss_pred             cCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885        106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS  183 (483)
Q Consensus       106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~  183 (483)
                                      .++.|.|+||+++.+  .+|.+ +|+   +++|+.+...   +.|.+.+|+  ..++||||++
T Consensus        69 ----------------~~~~w~W~dg~~~~~--~~w~~~~p~---~~~C~~~~~~---~~w~~~~C~--~~~~fICe~~  121 (123)
T 1hq8_A           69 ----------------ANGSWQWEDGSSLSY--NQLTLVEIP---KGSCAVYGSS---FKAYTEDCA--NLNTYICMKR  121 (123)
T ss_dssp             ----------------TTCCEEETTSCBCCT--TTCEEECCT---TCCEEEECST---TEEEEECTT--SCEEEEEEEC
T ss_pred             ----------------CCCCeEeCCCCCccc--cccccCCCC---CCCcEEEecc---CCEeccCCC--CCceeEeeee
Confidence                            468899999999876  88999 997   4799999754   269999999  9999999997

>1mpu_A NKG2-D type II integral membrane protein; C-type lectin-like domain, immune system; 2.50A {Homo sapiens} SCOP: d.169.1.1 PDB: 1hyr_B

Probab=99.89  E-value=4.6e-24  Score=185.16  Aligned_cols=123  Identities=21%  Similarity=0.443  Sum_probs=104.2

Q ss_pred             cCcccCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCC
Q psy14885         22 IDELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPN  101 (483)
Q Consensus        22 ~~~~~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~  101 (483)
                      ....+..||+||+.|+++||+++... ++|.+|+..|+.+||+|++|+|.+|++||..+.       ..||||+++..  
T Consensus        14 ~~~~~~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~fl~~~~-------~~~WIGl~~~~--   83 (138)
T 1mpu_A           14 TESYCGPCPKNWICYKNNCYQFFDES-KNWYESQASCMSQNASLLKVYSKEDQDLLKLVK-------SYHWMGLVHIP--   83 (138)
T ss_dssp             CCCCCCCCCTTCEECSSCEEEEEEEE-ECHHHHHHHHHHTSCEECCCCCTTTCGGGGGCC-------SEEEEEEEECT--
T ss_pred             CCCccCCCChhheEeCCEEEEEECCC-CCHHHHHHHHHhcCCEEeeeCCHHHHHHHHhcc-------CCEeEeeeccC--
Confidence            33446789999999999999999995 999999999999999999999999999987431       46677776432  


Q ss_pred             cccccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeee
Q psy14885        102 LWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFIC  180 (483)
Q Consensus       102 ~Wig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvC  180 (483)
                                          .++.|.|+||+++.+  .+|.+ +|+   +++|+.+...   +.|.+.+|+  ..++|||
T Consensus        84 --------------------~~~~w~W~dG~~~~~--~~w~~~~p~---~~~C~~~~~~---~~w~~~~C~--~~~~fIC  133 (138)
T 1mpu_A           84 --------------------TNGSWQWEDGSILSP--NLLTIIEMQ---KGDCALYASS---FKGYIENCS--TPNTYIC  133 (138)
T ss_dssp             --------------------TTCCEEETTSCBCCT--TSCEEECSS---CCSEEEEETT---TEEEEECTT--SCEEEEE
T ss_pred             --------------------CCCceEeCCCCcCCc--cccccCCCC---CCCCeEEECC---CcEEccCCC--CCCeEcc
Confidence                                468899999999876  88999 996   4799999754   259999999  9999999


Q ss_pred             ecch
Q psy14885        181 EASI  184 (483)
Q Consensus       181 e~~~  184 (483)
                      |++.
T Consensus       134 e~~~  137 (138)
T 1mpu_A          134 MQRT  137 (138)
T ss_dssp             EECC
T ss_pred             cCcC
Confidence            9973

>2h2t_B Low affinity immunoglobulin epsilon FC receptor ( IGE receptor) (FC-epsilon-RII)...; C-type lectin, calcium-bound, lectin domain; 1.30A {Homo sapiens} PDB: 2h2r_A 1t8c_A 1t8d_A

Probab=99.89  E-value=1.2e-23  Score=190.29  Aligned_cols=127  Identities=20%  Similarity=0.467  Sum_probs=104.4

Q ss_pred             CcccCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCc
Q psy14885         23 DELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNL  102 (483)
Q Consensus        23 ~~~~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~  102 (483)
                      ...+..||.||+.|+++||+++... ++|.+|+..|+.+||+|++|++++|++||..++.     ...||||+++..   
T Consensus        11 ~~~~~~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~fl~~~~~-----~~~~WIGl~~~~---   81 (175)
T 2h2t_B           11 GFVCNTCPEKWINFQRKCYYFGKGT-KQWVHARYACDDMEGQLVSIHSPEEQDFLTKRAS-----HTGSWIGLRNLD---   81 (175)
T ss_dssp             ---CCBCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHTTCEECCCCSHHHHHHHHTTCC-----TTCEEEEEEEET---
T ss_pred             CccCCCCCcccEEeCCEEEEEeCCc-cCHHHHHHHHhhcCCEEeecCCHHHHHHHHHHhc-----CCcEEecceecC---
Confidence            3346789999999999999999994 9999999999999999999999999999998773     245666666432   


Q ss_pred             ccccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCc-ccCCeEEEecccccccccccccCCCCce-eee
Q psy14885        103 WVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADN-VQRDYLAYSFSQSLKRWGFERVTGMEPL-LFI  179 (483)
Q Consensus       103 Wig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~-~~~~Cv~~~~~~~~~~W~~~~C~~~~~~-~fv  179 (483)
                                         .++.|.|+||+++.+  .+|.+ +|++. +.++|+.+...   +.|+|.+|+  ..+ +||
T Consensus        82 -------------------~~~~w~W~dG~~~~y--~~W~~geP~~~~~~~~Cv~~~~~---g~W~d~~C~--~~~~~fI  135 (175)
T 2h2t_B           82 -------------------LKGEFIWVDGSHVDY--SNWAPGEPTSRSQSEDCVMMRGS---GRWNDAFCD--RKLGAWV  135 (175)
T ss_dssp             -------------------TTTEEEETTSCCCSS--CCBCTTCCCC-----CEEEECTT---SCEEEECTT--CCEEEEE
T ss_pred             -------------------CCCCeEeCCCCcccC--cCcCCCCCCCCCCCCCceEEcCC---CcEEECCCC--CcCcceE
Confidence                               468899999999876  88999 99874 36899999642   369999999  999 999


Q ss_pred             eecch
Q psy14885        180 CEASI  184 (483)
Q Consensus       180 Ce~~~  184 (483)
                      ||++.
T Consensus       136 Ce~~~  140 (175)
T 2h2t_B          136 CDRLA  140 (175)
T ss_dssp             EEEEC
T ss_pred             EeECC
Confidence            99985

>1hup_A Mannose-binding protein; alpha-helical coiled-coil, C-type lectin; 2.50A {Homo sapiens} SCOP: d.169.1.1 h.1.1.1

Probab=99.89  E-value=1.2e-23  Score=183.23  Aligned_cols=120  Identities=18%  Similarity=0.222  Sum_probs=104.3

Q ss_pred             CCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccC
Q psy14885         28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNED  107 (483)
Q Consensus        28 ~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~  107 (483)
                      .|++||+.|+++||+++... ++|.+|+..|+..||+|++|+|.+|++||..++.      ..||||+++..        
T Consensus        19 ~~~~~w~~~~~~Cy~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~------~~~WIGl~~~~--------   83 (141)
T 1hup_A           19 LTFSLGKQVGNKFFLTNGEI-MTFEKVKALCVKFQASVATPRNAAENGAIQNLIK------EEAFLGITDEK--------   83 (141)
T ss_dssp             HHHHTSEEETTEEEEEEEEE-EEHHHHHHHHHHTTCEECCCCSHHHHHHHHHHCS------SCEEEEEECSS--------
T ss_pred             hhcCCeEEECCEEEEEeCCC-cCHHHHHHHHHhCCCEECccCCHHHHHHHHHHhc------CCEEEeeeecC--------
Confidence            58899999999999999985 9999999999999999999999999999998874      55677776433        


Q ss_pred             cccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCc-ccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885        108 DPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADN-VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS  183 (483)
Q Consensus       108 ~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~-~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~  183 (483)
                                    .++.|.|+||+++.+  .+|.+ +|++. +.++|+.+...   +.|++.+|+  ..++||||++
T Consensus        84 --------------~~~~w~W~dG~~~~~--~~W~~g~P~~~~~~~~Cv~~~~~---g~W~~~~C~--~~~~fICe~~  140 (141)
T 1hup_A           84 --------------TEGQFVDLTGNRLTY--TNWNEGEPNNAGSDEDCVLLLKN---GQWNDVPCS--TSHLAVCEFP  140 (141)
T ss_dssp             --------------STTCCEETTSCBCSC--CCBCTTCCCCGGGCCCEEEECTT---SCEEEECTT--SEEEEEEEEE
T ss_pred             --------------cCCcEEECCcCCCcC--CCCCCCCCCCCCCCCCeEEECCC---CcEeccCCC--CCccEEEEEE
Confidence                          468899999999975  89999 99873 46899999732   369999999  9999999987

>3bdw_B NKG2-A/NKG2-B type II integral membrane protein; NK cells, receptor, glycoprotein, lectin, signal-A transmembrane, immune system receptor; 2.50A {Homo sapiens} PDB: 3cdg_K 3cii_H

Probab=99.89  E-value=2.4e-23  Score=176.08  Aligned_cols=117  Identities=21%  Similarity=0.467  Sum_probs=96.8

Q ss_pred             cCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885         26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN  105 (483)
Q Consensus        26 ~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig  105 (483)
                      +..||+||+.|+++||+++... ++|.+|+..|++.||+||+|+|++|++||..++       ..||||+++..      
T Consensus         4 c~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~-------~~~WIGl~~~~------   69 (120)
T 3bdw_B            4 CGHCPEEWITYSNSCYYIGKER-RTWEESLLACTSKNSSLLSIDNEEEMKFLSIIS-------PSSWIGVFRNS------   69 (120)
T ss_dssp             CTTSCTTCEESSSSEEEEEEEE-ECHHHHHHHHHHTTSEECCCCCHHHHHHHHHHC-------SEEEEEEECSS------
T ss_pred             CCCCCCCceEECCEEEEEECCc-cCHHHHHHHHHhCCCEEceeCCHHHHHHHHHcC-------CCEeEEEEecC------
Confidence            5789999999999999999985 999999999999999999999999999999864       36777776533      


Q ss_pred             cCcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885        106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS  183 (483)
Q Consensus       106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~  183 (483)
                                      .++.|.|+||+++.+  .+|  +|++ ..++|+.+...    .|.+.+|+  ..++||||++
T Consensus        70 ----------------~~~~w~W~dg~~~~~--~~~--~p~~-~~~~C~~~~~~----~w~~~~C~--~~~~fICe~~  120 (120)
T 3bdw_B           70 ----------------SHHPWVTMNGLAFKH--EIK--DSDN-AELNCAVLQVN----RLKSAQCG--SSIIYHCKHK  120 (120)
T ss_dssp             ----------------TTSCCEETTSSBCCS--CCC-------CCCCEEEEESS----SEEEECTT--SCEEEEEECC
T ss_pred             ----------------CCCceEeCCCCccCc--cCc--CCCC-CCCCccEEeCC----ceECCCCC--CCcceeeeeC
Confidence                            467899999999865  444  6665 35899999753    39999999  9999999974

>2xr6_A CD209 antigen; sugar binding protein, carbohydrate binding, mannose; HET: MAN 07B; 1.35A {Homo sapiens} PDB: 1sl4_A* 2it6_A* 1k9i_A* 2xr5_A* 1sl5_A* 2it5_A* 1xph_A 1k9j_A*

Probab=99.89  E-value=1.9e-23  Score=187.97  Aligned_cols=129  Identities=22%  Similarity=0.449  Sum_probs=106.2

Q ss_pred             ccCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccc
Q psy14885         25 LELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV  104 (483)
Q Consensus        25 ~~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wi  104 (483)
                      .+..||.||+.|+++||+++... ++|.+|+..|+.+||+|++|+|.+|++||..++...   ...||||+++..     
T Consensus        18 ~~~~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~fl~~~~~~~---~~~~WIGl~~~~-----   88 (170)
T 2xr6_A           18 LSHPCPWEWTFFQGNCYFMSNSQ-RNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSRS---NRFTWMGLSDLN-----   88 (170)
T ss_dssp             ---CCCTTCEEETTEEEEECSSC-BCHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHHHH---TCCEEEEEEEEE-----
T ss_pred             ccCCCCcCcEEeCCEEEEEECCc-CCHHHHHHHHHhCCCEEeeeCCHHHHHHHHHHhccC---CCCEEeccccCC-----
Confidence            36789999999999999999995 999999999999999999999999999999876432   345566665422     


Q ss_pred             ccCcccccccccCCcCCCCCccccCCCCccccc-cccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885        105 NEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNEL-DAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA  182 (483)
Q Consensus       105 g~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~-~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~  182 (483)
                                       .++.|.|+||+++.+. ..+|.+ +|++.+.++|+.+...    .|+|.+|+  ..++||||+
T Consensus        89 -----------------~~~~w~W~dG~~~~~~~~~~W~~geP~~~~~~~Cv~~~~~----gW~d~~C~--~~~~fICe~  145 (170)
T 2xr6_A           89 -----------------QEGTWQWVDGSPLLPSFKQYWNRGEPNNVGEEDCAEFSGN----GWNDDKCN--LAKFWICKK  145 (170)
T ss_dssp             -----------------ETTEEEETTSCBCCGGGGGGBCTTCCCCTTCCCEEEEETT----EEEEECTT--SCBEEEEEE
T ss_pred             -----------------CCCeEEeCCCCCcccccccCCCCCCCCCCCCCCCeEEeCC----cEEccccC--CCccEEEEE
Confidence                             4688999999988741 278999 9988767899999753    39999999  999999999


Q ss_pred             chh
Q psy14885        183 SIQ  185 (483)
Q Consensus       183 ~~~  185 (483)
                      +..
T Consensus       146 ~~~  148 (170)
T 2xr6_A          146 SAA  148 (170)
T ss_dssp             ETT
T ss_pred             CCC
Confidence            854

>3m9z_A Killer cell lectin-like receptor subfamily B MEMB; C-type lectin-like domain, domain swapping, disulfide bond, transmembrane protein; 1.70A {Mus musculus} SCOP: d.169.1.0 PDB: 3t3a_A

Probab=99.89  E-value=3.6e-23  Score=179.60  Aligned_cols=124  Identities=20%  Similarity=0.417  Sum_probs=102.2

Q ss_pred             cCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885         26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN  105 (483)
Q Consensus        26 ~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig  105 (483)
                      ...||+||+.|+++||+++... ++|.+|+..|+++||+||+|+|.+|++||..++...   ...||||+++..      
T Consensus         3 ~~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~---~~~~WIGl~~~~------   72 (139)
T 3m9z_A            3 KLECPQDWLSHRDKCFHVSQVS-NTWEEGLVDCDGKGATLMLIQDQEELRFLLDSIKEK---YNSFWIGLRYTL------   72 (139)
T ss_dssp             -CCCCTTCEEETTEEEEECSSC-BCHHHHHHHHHHTTCEECCCCCHHHHHHHHHHHTCS---SSCEEEEEEEEC------
T ss_pred             CCCCCccceecCCEEEEEECCc-CCHHHHHHHHHhcCCeEeeeCCHHHHHHHHHHhccc---CccEEEEEeccC------
Confidence            4679999999999999999995 999999999999999999999999999999988632   345666666432      


Q ss_pred             cCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecch
Q psy14885        106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASI  184 (483)
Q Consensus       106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~~  184 (483)
                                      .++.|.|+||+++.+  .+|.. .|.+  +++|+.+..    +.|.+.+|+  ..++||||++.
T Consensus        73 ----------------~~~~w~W~dg~~~~~--~~~~~~~~~~--~~~Cv~~~~----~~w~~~~C~--~~~~fICe~~~  126 (139)
T 3m9z_A           73 ----------------PDMNWKWINGSTLNS--DVLKITGDTE--NDSCAAISG----DKVTFESCN--SDNRWICQKEL  126 (139)
T ss_dssp             ----------------CCCCCBCTTSCBCCH--HHHTTSSCTT--CEEEEEEET----TEEEEEETT--SCBEEEEEEEC
T ss_pred             ----------------CCCCeEeCCCCcCCc--CccccCCCCC--CCCeeEEeC----CcEEeCCCC--CCCceEeeecC
Confidence                            467899999999876  45654 4332  479999964    359999999  99999999986


Q ss_pred             h
Q psy14885        185 Q  185 (483)
Q Consensus       185 ~  185 (483)
                      .
T Consensus       127 ~  127 (139)
T 3m9z_A          127 Y  127 (139)
T ss_dssp             C
T ss_pred             c
Confidence            4

>3hup_A Early activation antigen CD69; C-type lectin-like domain, disulfide bond, glycoprotein, LEC membrane, phosphoprotein, signal-anchor, transmembrane; 1.37A {Homo sapiens} SCOP: d.169.1.1 PDB: 1e87_A 1e8i_A 3cck_A

Probab=99.88  E-value=9.8e-23  Score=174.86  Aligned_cols=118  Identities=15%  Similarity=0.356  Sum_probs=99.1

Q ss_pred             cccCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcc
Q psy14885         24 ELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLW  103 (483)
Q Consensus        24 ~~~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~W  103 (483)
                      .....||+||+.|+++||+++... ++|.+|+..|+++||+||+|+|++|++||..++.     ...||||+++.     
T Consensus        11 ~~~~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~-----~~~~WIGl~~~-----   79 (130)
T 3hup_A           11 SHVSSCSEDWVGYQRKCYFISTVK-RSWTSAQNACSEHGATLAVIDSEKDMNFLKRYAG-----REEHWVGLKKE-----   79 (130)
T ss_dssp             CCCBCCCTTCEEETTEEEEECSSC-BCHHHHHHHHHTTTCEECCCCSHHHHHHHHHHHT-----TSCEEEEEEEC-----
T ss_pred             CCCCCCChhheecCCEEEEEECCc-cCHHHHHHHHHhcCCEEeecCCHHHHHHHHHhhC-----CCCEEEEEEeC-----
Confidence            346789999999999999999994 9999999999999999999999999999999883     34567776642     


Q ss_pred             cccCcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885        104 VNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS  183 (483)
Q Consensus       104 ig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~  183 (483)
                                        .++.|.|+||+++    .+|.+  . .+.++|+.+...    .|++.+|+  ..++||||++
T Consensus        80 ------------------~~~~w~W~dg~~~----~~w~~--~-~~~~~Cv~~~~~----~w~~~~C~--~~~~fICe~~  128 (130)
T 3hup_A           80 ------------------PGHPWKWSNGKEF----NNWFN--V-TGSDKCVFLKNT----EVSSMECE--KNLYWICNKP  128 (130)
T ss_dssp             ------------------TTSCEEETTSCBC----CCCSC--C-CSSCSEEEEETT----EEEEECTT--SCBEEEEEEE
T ss_pred             ------------------CCCeEEeCCCCcc----cCccC--C-CCCCCceEEeCC----CcccCCCC--CCccEEeccC
Confidence                              2578999999974    57874  1 235899999652    49999999  9999999997

>1rtm_1 Mannose-binding protein-A; lectin; 1.80A {Rattus norvegicus} SCOP: d.169.1.1 h.1.1.1 PDB: 1kwu_A* 1kwv_A* 1kwt_A* 1kwx_A* 1kwy_A* 1kx1_A* 1kww_A 1kwz_A* 1kx0_A* 3kmb_1* 1kmb_1* 2kmb_1* 4kmb_1* 1afb_1* 1afa_1* 1afd_1 1bch_1* 1bcj_1* 1fif_A 1fih_A*

Probab=99.88  E-value=3.2e-23  Score=182.32  Aligned_cols=120  Identities=15%  Similarity=0.151  Sum_probs=103.9

Q ss_pred             CCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccC
Q psy14885         28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNED  107 (483)
Q Consensus        28 ~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~  107 (483)
                      .|++||+.++++||+++... ++|.+|+..|+..||+|++|+|.+|++||..++.      ..||||+++..        
T Consensus        27 ~~~~~w~~~~~~Cy~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~------~~~WIGl~~~~--------   91 (149)
T 1rtm_1           27 HAFSMGKKSGKKFFVTNHER-MPFSKVKALCSELRGTVAIPRNAEENKAIQEVAK------TSAFLGITDEV--------   91 (149)
T ss_dssp             HHHHTTCCTTSCEEEEEEEE-EEHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHS------SCEEEEEECSS--------
T ss_pred             hcCCCeEEeCCEEEEEeCCC-CCHHHHHHHHHhCCCEEeeeCCHHHHHHHHHHhc------CCEEEEeeccC--------
Confidence            47899999999999999985 9999999999999999999999999999999883      45677766432        


Q ss_pred             cccccccccCCcCCCCCccccCCCCccccccccCCC-CCCC-cccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885        108 DPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPAD-NVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS  183 (483)
Q Consensus       108 ~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~-~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~  183 (483)
                                    .++.|.|+||+++.+  .+|.+ +|++ .+.++|+.+...   +.|++.+|+  ..++||||++
T Consensus        92 --------------~~~~w~W~dg~~~~~--~~W~~g~P~~~~~~~~Cv~~~~~---g~W~d~~C~--~~~~fICe~~  148 (149)
T 1rtm_1           92 --------------TEGQFMYVTGGRLTY--SNWKKDEPNDHGSGEDCVTIVDN---GLWNDISCQ--ASHTAVCEFP  148 (149)
T ss_dssp             --------------STTCCEETTSSBCCS--CCBCTTCCCCCTTCCCEEEECGG---GCEEEECTT--SEEEEEEEEC
T ss_pred             --------------cCCeEEECCCCCccc--cCcCCCCCCCCCCCCCeEEECCC---CCEeCCCCC--CCeeEEEEee
Confidence                          567899999999965  88999 9987 346899999732   369999999  9999999987

>2kq2_A Ribonuclease H-related protein; PSI, NESG, protein structure, APO enzyme, structural genomics, protein structure initiative; NMR {Desulfitobacterium hafniense dcb-2} PDB: 2kw4_A

Probab=99.88  E-value=1e-23  Score=184.56  Aligned_cols=124  Identities=21%  Similarity=0.173  Sum_probs=97.5

Q ss_pred             cceEe-eCCCCCCCceEEEEEeCCCEE----E-eC--CC--CCcchHHHHHHHHHHHHHhHhcCCceEEEEeccHHHHHh
Q psy14885        220 TDVVF-DLSKRNSNTGFAFIINNENFQ----Y-RL--PH--EASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNG  289 (483)
Q Consensus       220 ~~~~~-DgS~~~~~~G~g~~~~~~~~~----~-~l--~~--~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs~~~~~~  289 (483)
                      ..++| |||+.+|++|+|+++.+.+..    . .+  +.  .+||++||+.|++.||+.+.+.+. +|.|+|||+.+.+.
T Consensus         6 ~i~iytDGs~~~g~~G~G~vi~~~g~~~~~~~~~~~~~~~~~~tNn~aEl~A~~~AL~~a~~~~~-~v~I~tDS~~i~~w   84 (147)
T 2kq2_A            6 EYDVYTDGSYVNGQYAWAYAFVKDGKVHYEDADVGKNPAAATMRNVAGEIAAALYAVKKASQLGV-KIRILHDYAGIAFW   84 (147)
T ss_dssp             CCEEECCCCCBTTBCEEEEEEEETTEEEEEEEEECCCGGGGGTCTTHHHHHHHHHHHHHHHHHTC-CCCBSSCCSTHHHH
T ss_pred             eEEEEECCCCCCCCcEEEEEEEECCEEEEEEeccccccccccccHHHHHHHHHHHHHHHHHHCCC-eEEEEECcHHHHHH
Confidence            45567 999999999999999765432    2 22  21  369999999999999999877666 99999999999998


Q ss_pred             hcccCCcc-hHHHHHHHHHHHHhhCCCceEEEEeccCCCCcchHHHhHHHHhhhcCCCC
Q psy14885        290 IDNIQQRN-NIIQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAKNSINSKLL  347 (483)
Q Consensus       290 l~~~~~~~-~~~~~i~~~~~~~~~~~~~v~~~WvpgH~g~~gNe~AD~lAk~a~~~~~~  347 (483)
                      +.+.++.+ .....+.+.+..+..   .|+|.|||||+|++|||.||+|||+|+....+
T Consensus        85 ~~~~w~~~~~~~~~~~~l~~~l~~---~v~~~wV~gH~g~~~Ne~AD~LA~~a~~~~~~  140 (147)
T 2kq2_A           85 ATGEWKAKNEFTQAYAKLMNQYRG---IYSFEKVKAHSGNEFNDYVDMKAKSALGIRDL  140 (147)
T ss_dssp             TTSSSSCCHHHHHHHHCGGGGGST---TCCBCCCCCCCCCHHHHHHHHHHHHHHTCCCT
T ss_pred             HhCCCccCCcchHHHHHHHHHhcC---CeeEEEecCcCCCcchHHHHHHHHHHHhcccc
Confidence            88877643 333344444444432   89999999999999999999999999987654

>3ff7_C Killer cell lectin-like receptor subfamily G member 1; KLRG1-cadherin complex, calcium, cell adhesion, cell junction, cell membrane; 1.80A {Homo sapiens} SCOP: d.169.1.0

Probab=99.88  E-value=6.6e-23  Score=171.17  Aligned_cols=112  Identities=24%  Similarity=0.412  Sum_probs=95.2

Q ss_pred             CcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccCc
Q psy14885         29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDD  108 (483)
Q Consensus        29 C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~~  108 (483)
                      ||+||+.|+++||+++... ++|.+|+..|+++||+||+|+|.+|++||..++.     ...||||+++           
T Consensus         1 Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~-----~~~~WiGl~~-----------   63 (112)
T 3ff7_C            1 CPDRWMKYGNHCYYFSVEE-KDWNSSLEFCLARDSHLLVITDNQEMSLLQVFLS-----EAFSWIGLRN-----------   63 (112)
T ss_dssp             CCTTCEEETTEEEEECSSC-BCHHHHHHHHHTTTCEECCCCSHHHHHHHHTTCC-----SSCEEEEEEE-----------
T ss_pred             CCccceEeCCEEEEEeCCc-cCHHHHHHHHhhcCCeEeeECCHHHHHHHHHhcc-----CCCEEEeeec-----------
Confidence            9999999999999999995 9999999999999999999999999999998773     2345666653           


Q ss_pred             ccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885        109 PQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA  182 (483)
Q Consensus       109 ~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~  182 (483)
                                    ++.|.|+||+++.+  .+|.+  ++ +.++|+.+...    .|.+.+|+  ..++|||||
T Consensus        64 --------------~~~~~W~dg~~~~~--~~w~~--~~-~~~~C~~~~~~----~w~~~~C~--~~~~fICek  112 (112)
T 3ff7_C           64 --------------NSGWRWEDGSPLNF--SRISS--NS-FVQTCGAINKN----GLQASSCE--VPLHWVCKK  112 (112)
T ss_dssp             --------------SSSEEETTSCBCCS--SCEEC--SS-TTCCEEEEETT----EEEEECTT--SCBEEEEEC
T ss_pred             --------------CCceEeCCCCcccc--ceecC--CC-CCCCCeEEeCC----CcccCCCC--CCCceeecC
Confidence                          35699999999876  78875  22 25899999752    39999999  999999997

>3ff9_A Killer cell lectin-like receptor subfamily G member 1; natural killer cell receptor KLTG1, glycoprotein, membrane, phosphoprotein, signal-anchor; 1.80A {Mus musculus} SCOP: d.169.1.0 PDB: 3ff8_C

Probab=99.88  E-value=5.2e-23  Score=172.65  Aligned_cols=114  Identities=19%  Similarity=0.280  Sum_probs=95.7

Q ss_pred             CCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccC
Q psy14885         28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNED  107 (483)
Q Consensus        28 ~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~  107 (483)
                      +||+||+.|+++||+++... ++|.+|+..|+++||+||+|+|.+|++||..++.     ...||||+++          
T Consensus         1 ~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~-----~~~~WIGl~~----------   64 (115)
T 3ff9_A            1 MCPILWTRNGSHCYYFSMEK-KDWNSSLKFCADKGSHLLTFPDNQGVKLFGEYLG-----QDFYWIGLRN----------   64 (115)
T ss_dssp             CCCTTCEEETTEEEEECSSC-BCHHHHHHHHHHTTCEECCCTTSCCHHHHHTTCC-----SSCEEEEEEE----------
T ss_pred             CCCccceecCCEEEEEEcCC-cCHHHHHHHHHhcCCeeeeeCCHHHHHHHHHhhC-----CCcEEEeeee----------
Confidence            59999999999999999995 9999999999999999999999999999998773     2356666653          


Q ss_pred             cccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeecch
Q psy14885        108 DPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASI  184 (483)
Q Consensus       108 ~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~~  184 (483)
                                     ++.|.|+||+++.+   .|  +|++ +.++|+.+...    .|.+.+|+  ..++||||+++
T Consensus        65 ---------------~~~w~W~dg~~~~~---~~--~p~~-~~~~C~~~~~~----~w~~~~C~--~~~~fICe~~~  114 (115)
T 3ff9_A           65 ---------------IDGWRWEGGPALSL---RI--LTNS-LIQRCGAIHRN----GLQASSCE--VALQWICKKVL  114 (115)
T ss_dssp             ---------------SSSEEETTSCBCCS---CC--BCSS-TTCCEEEEETT----EEEEECTT--SCBEEEEEEEC
T ss_pred             ---------------CCceEeCCCCcccc---cc--cCCC-CCCCCeEEcCC----CcccccCC--CCCceEEEEec
Confidence                           35699999998864   24  4544 46899999752    39999999  99999999973

>1fm5_A Early activation antigen CD69; C-type lectin-like domain, natural killer cell receptor, lectin, C-type lectin, immune system; 2.27A {Homo sapiens} SCOP: d.169.1.1

Probab=99.88  E-value=1.4e-22  Score=186.94  Aligned_cols=118  Identities=15%  Similarity=0.348  Sum_probs=96.2

Q ss_pred             ccCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccc
Q psy14885         25 LELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV  104 (483)
Q Consensus        25 ~~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wi  104 (483)
                      ....||+||+.|+++||+++... ++|.+|+..|+.+||+|++|+|++|++||..++.     ...||||+++.      
T Consensus        81 ~~~~Cp~gW~~~~~~CY~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~fl~~~~~-----~~~~WIGl~~~------  148 (199)
T 1fm5_A           81 HVSSCSEDWVGYQRKCYFISTVK-RSWTSAQNACSEHGATLAVIDSEKDMNFLKRYAG-----REEHWVGLKKE------  148 (199)
T ss_dssp             ----CCTTSEEETTEEEEECSSC-BCHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHC-----SSCEEEEEECC------
T ss_pred             CCCCCCCCcEEECCEEEEEeCCc-cCHHHHHHHHhhcCCEEEecCCHHHHHHHHHhhC-----CCCEEeeeEEC------
Confidence            35779999999999999999994 9999999999999999999999999999999884     24566666532      


Q ss_pred             ccCcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeecch
Q psy14885        105 NEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASI  184 (483)
Q Consensus       105 g~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~~  184 (483)
                                      . ++.|.|+||+++    ++|.+  . .+.++|+.+..    +.|+|.+|+  ..++||||++.
T Consensus       149 ----------------~-~~~w~W~DGs~~----~~W~~--~-~~~~~Cv~l~~----~~W~d~~C~--~~~~fICe~~~  198 (199)
T 1fm5_A          149 ----------------P-GHPWKWSNGKEF----NNWFN--V-TGSDKCVFLKN----TEVSSMECE--KNLYWICNKPY  198 (199)
T ss_dssp             ----------------T-TSCCEETTSCBC----CCSSC--C-CSSSSEEEECS----SCEEEECTT--SCBEEEEEEEC
T ss_pred             ----------------C-CCCeEECCCCcc----ccccC--C-CCCCCceEEEC----CCEEEecCC--CCEEEEccccC
Confidence                            1 578999999974    57873  2 23589999965    359999999  99999999973

>3qio_A GAG-POL polyprotein; RNAse H, inhibitor, nuclease, transferase, hydrolase- complex; HET: QID; 1.40A {Hiv-1 M} SCOP: c.55.3.1 PDB: 3qin_A* 3hyf_A* 1o1w_A 3lp3_A* 1hrh_A 3k2p_A* 1rdh_A

Probab=99.88  E-value=1.9e-22  Score=176.79  Aligned_cols=121  Identities=14%  Similarity=0.218  Sum_probs=91.5

Q ss_pred             cceEe-eCCCCC--CCceEEEEEeCCCEEEeCCCCCcchHHHHHHHHHHHHHhHhcCCceEEEEeccHHHHHhhccc---
Q psy14885        220 TDVVF-DLSKRN--SNTGFAFIINNENFQYRLPHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGIDNI---  293 (483)
Q Consensus       220 ~~~~~-DgS~~~--~~~G~g~~~~~~~~~~~l~~~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs~~~~~~l~~~---  293 (483)
                      ..++| |||+.+  |+.|+|+++.+......-...+||++||+.|++.||+.+    ..++.|+|||++|++.|++.   
T Consensus        12 ~~~iytDGs~~~n~g~~g~G~v~~~~~~~~~~~~~~Tnn~aEl~A~i~AL~~~----~~~v~i~tDS~~v~~~i~~w~~~   87 (150)
T 3qio_A           12 AETFYVDGAANRETKLGKAGYVTNRGRQKVVTLTDTTNQKTELQAIYLALQDS----GLEVNIVTDSQYALGIITQWIHN   87 (150)
T ss_dssp             CEEEEEEEEECTTTCCEEEEEEETTSCEEEEEESSCCHHHHHHHHHHHHHHHS----CSEEEEEESCHHHHHHHHHHHHH
T ss_pred             CEEEEEccCCCCCCCCeEEEEEEEcCCEEEEeCCCCCHHHHHHHHHHHHHHhC----CCcEEEEeCcHHHHHHHHHHHHH
Confidence            35566 999865  778999998765443222367899999999999999986    48999999999999999862   


Q ss_pred             -----CC---cchH-HHHHHHHHHHHhhCCCceEEEEeccCCCCcchHHHhHHHHhhhcC
Q psy14885        294 -----QQ---RNNI-IQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAKNSINS  344 (483)
Q Consensus       294 -----~~---~~~~-~~~i~~~~~~~~~~~~~v~~~WvpgH~g~~gNe~AD~lAk~a~~~  344 (483)
                           +.   +.++ ...+.+.+..+..++..|+|.|||||+|++|||.||+||++|+..
T Consensus        88 W~~~gw~~~~g~~v~n~~l~~~l~~~l~~~~~v~~~wV~gH~g~~~Ne~AD~LA~~a~~~  147 (150)
T 3qio_A           88 WKKRGWKTADKKPVKNVDLVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGIRK  147 (150)
T ss_dssp             HCC------------CHHHHHHHHHHHTTCSEEEEEECCTTSCCHHHHHHHHHHHTTTSC
T ss_pred             HhhcCcCcCcCcccccHHHHHHHHHHHhhcCceEEEEccCcCCChhHHHHHHHHHHHHHH
Confidence                 11   1111 123344444434568899999999999999999999999999875

>2qkb_A Ribonuclease H1, HS-RNAse HC, RNAse H1; RNA/DNA hybrid; 2.40A {Homo sapiens} PDB: 2qk9_A 2qkk_A*

Probab=99.88  E-value=2.6e-22  Score=177.33  Aligned_cols=124  Identities=23%  Similarity=0.309  Sum_probs=95.8

Q ss_pred             ceEe-eCCCCC--C---CceEEEEEeCCC---EEEeCCCCCcchHHHHHHHHHHHHHhHhcCCceEEEEeccHHHHHhhc
Q psy14885        221 DVVF-DLSKRN--S---NTGFAFIINNEN---FQYRLPHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGID  291 (483)
Q Consensus       221 ~~~~-DgS~~~--~---~~G~g~~~~~~~---~~~~l~~~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs~~~~~~l~  291 (483)
                      .++| |||+.+  +   .+|+|+++.+..   ....+.+.+||++||+.|++.||+.+.+.+..++.|+|||++|++.|.
T Consensus         8 ~~iytDGs~~~n~~~~~~aG~Gvv~~~~~~~~~~~~l~~~~tn~~aEl~A~~~aL~~~~~~~~~~v~i~tDS~~vi~~i~   87 (154)
T 2qkb_A            8 VVVYTDGCCSSNGRRRPRAGIGVYWGPGHPLNVGIRLPGRQTNQRAEIHAACKAIEQAKTQNINKLVLYTNSMFTINGIT   87 (154)
T ss_dssp             EEEEEEEEEETTTSSSCEEEEEEECSTTCTTCEEEECCSSCCHHHHHHHHHHHHHHHHHHTTCCEEEEEESCHHHHHHHH
T ss_pred             EEEEEccCcCCCCCCCCcEEEEEEEECCCceeEEeecCCCCchHHHHHHHHHHHHHHHHhCCCceEEEEECcHHHHhhhh
Confidence            4466 999865  2   379999987532   456676678999999999999999998877899999999999999998


Q ss_pred             cc--------CCc---ch-HHHHHHHHHHHHhhCCCceEEEEeccCCCCcchHHHhHHHHhhhcCC
Q psy14885        292 NI--------QQR---NN-IIQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAKNSINSK  345 (483)
Q Consensus       292 ~~--------~~~---~~-~~~~i~~~~~~~~~~~~~v~~~WvpgH~g~~gNe~AD~lAk~a~~~~  345 (483)
                      +.        ++.   .+ ....+.+.+..+.. +..|+|.|||||+|++|||.||+|||+|+..+
T Consensus        88 ~~~~~w~~~~w~~~~~~~~~n~~l~~~i~~l~~-~~~v~~~~V~~H~g~~~N~~AD~LA~~a~~~~  152 (154)
T 2qkb_A           88 NWVQGWKKNGWKTSAGKEVINKEDFVALERLTQ-GMDIQWMHVPGHSGFIGNEEADRLAREGAKQS  152 (154)
T ss_dssp             THHHHHHTTTSBCTTSSBCTTHHHHHHHHHHHT-TCEEEEEECCTTSSCHHHHHHHHHHHHHHTCC
T ss_pred             hhHHHHHhccccccCCCccccHHHHHHHHHHHc-CCceEEEEccCCCCCHhHHHHHHHHHHHHHhc
Confidence            61        221   11 11334444444444 46799999999999999999999999998764

>1buu_A Protein (mannose-binding protein A); lectin, HOST defense, metalloprotein, sugar binding protein; 1.90A {Rattus norvegicus} SCOP: d.169.1.1 h.1.1.1

Probab=99.87  E-value=1.1e-22  Score=182.65  Aligned_cols=120  Identities=15%  Similarity=0.153  Sum_probs=103.6

Q ss_pred             CCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccC
Q psy14885         28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNED  107 (483)
Q Consensus        28 ~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~  107 (483)
                      .||++|..++++||+++... ++|.+|+..|+..||+|++|+|.+|++||..++.      ..||||+++..        
T Consensus        46 ~~~~~~~~~~~~Cy~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~------~~~WIGl~d~~--------  110 (168)
T 1buu_A           46 HAFSMGKKSGKKFFVTNHER-MPFSKVKALCSELRGTVAIPRNAEENKAIQEVAK------TSAFLGITDEV--------  110 (168)
T ss_dssp             HHHHTTCCTTSCEEEEEEEE-ECHHHHHHHHHHTTSEECCCCSHHHHHHHHHHHC------SCEECSEECSS--------
T ss_pred             ccCCCeEEECCEEEEEeCCc-cCHHHHHHHHHhCCCEEeeeCCHHHHHHHHHHhc------CCEEeeeecCC--------
Confidence            58999999999999999985 9999999999999999999999999999998873      45666665432        


Q ss_pred             cccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCc-ccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885        108 DPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADN-VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS  183 (483)
Q Consensus       108 ~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~-~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~  183 (483)
                                    .++.|.|+||+++.+  .+|.+ +|++. +.++||.+...   +.|+|.+|+  ..++||||++
T Consensus       111 --------------~~g~w~W~dG~~~~y--~~W~~geP~~~~~~e~Cv~~~~~---g~W~d~~C~--~~~~~ICe~~  167 (168)
T 1buu_A          111 --------------TEGQFMYVTGGRLTY--SNWKKDEPNDHGSGEDCVTIVDN---GLWNDISCQ--ASHTAVCEFP  167 (168)
T ss_dssp             --------------STTCCEETTSSBCSC--CCBSSSSCCCTTSCCCEEEECTT---SCEEEECTT--SCEEEEEEEC
T ss_pred             --------------cCCCEEeCCCCCcCC--CCCCCCCCCCCCCCCCeEEECCC---CCEEccCCC--CCEEEEEEec
Confidence                          578899999999965  89999 99873 46899999732   369999999  9999999986

>3h08_A RNH (ribonuclease H); RNAse H, 3D-structure, endonuclease, hydrolase, magnesium, metal-binding; 1.60A {Chlorobaculum tepidum}

Probab=99.87  E-value=1.6e-22  Score=177.15  Aligned_cols=122  Identities=16%  Similarity=0.225  Sum_probs=90.0

Q ss_pred             cceEe-eCCCCC--CCceEEEEEeCCCEEEeC---CCCCcchHHHHHHHHHHHHHhHhcCCceEEEEeccHHHHHhhccc
Q psy14885        220 TDVVF-DLSKRN--SNTGFAFIINNENFQYRL---PHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGIDNI  293 (483)
Q Consensus       220 ~~~~~-DgS~~~--~~~G~g~~~~~~~~~~~l---~~~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs~~~~~~l~~~  293 (483)
                      ..++| |||+.+  |.+|+|+++...+....+   .+.+||++||+.|++.||+.+.+  ..++.|+|||++|++.|.+.
T Consensus         4 ~i~iytDGs~~~n~g~~g~G~v~~~~~~~~~~~~~~~~~Tnn~aEl~A~~~AL~~~~~--~~~v~I~tDS~~vi~~i~~~   81 (146)
T 3h08_A            4 TITIYTDGAASGNPGKGGWGALLMYGSSRKEISGYDPATTNNRMELMAAIKGLEALKE--PARVQLYSDSAYLVNAMNEG   81 (146)
T ss_dssp             EEEEEEEEEESSTTEEEEEEEEEEETTEEEEEEEEEEEECHHHHHHHHHHHHHHTCSS--CCEEEEEESCHHHHHHHHSS
T ss_pred             eEEEEEecCCCCCCCceEEEEEEEECCeeEEeecCCCCCcHHHHHHHHHHHHHHhcCc--cCcEEEEeChHHHHHHHHHH
Confidence            34566 999866  778999999775543222   24689999999999999999974  68999999999999999872


Q ss_pred             C---------C---cch-HHHHHHHHHHHHhhCCCceEEEEeccCCCCcchHHHhHHHHhhhcC
Q psy14885        294 Q---------Q---RNN-IIQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAKNSINS  344 (483)
Q Consensus       294 ~---------~---~~~-~~~~i~~~~~~~~~~~~~v~~~WvpgH~g~~gNe~AD~lAk~a~~~  344 (483)
                      +         .   +.+ ....+.+.+..+.. ...|+|.|||||+|+++||.||+|||+|+..
T Consensus        82 w~~~W~~~~w~~~~~~~v~n~~l~~~~~~~~~-~~~v~~~~V~gH~g~~~N~~AD~LA~~a~~~  144 (146)
T 3h08_A           82 WLKRWVKNGWKTAAKKPVENIDLWQEILKLTT-LHRVTFHKVKGHSDNPYNSRADELARLAIKE  144 (146)
T ss_dssp             HHHHHHHTTCC----CCCTTHHHHHHHHHHHH-HSEEEEEECCC-CCSHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHCCCccCCCCCcCCHHHHHHHHHHHh-hCceEEEEcCCcCCcHhHHHHHHHHHHHHHh
Confidence            1         1   101 11223333333333 2479999999999999999999999999864

>3c8j_A Natural killer cell receptor LY49C; MHC, virus, immune system; 2.60A {Mus musculus} SCOP: d.169.1.1 PDB: 3c8k_D 1p4l_D 1ja3_A 1p1z_D

Probab=99.87  E-value=1.1e-22  Score=188.20  Aligned_cols=122  Identities=19%  Similarity=0.319  Sum_probs=104.8

Q ss_pred             cCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885         26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN  105 (483)
Q Consensus        26 ~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig  105 (483)
                      +..||+||+.|+++||+++... ++|.+|+..|++.||+|++|+|.+|++||..++.     ...||||+++..      
T Consensus        77 ~~~Cp~gW~~~~~~CY~~~~~~-~tw~~A~~~C~~~g~~LasI~s~~E~~fl~~~~~-----~~~~WIGl~~~~------  144 (203)
T 3c8j_A           77 TGRGVKYWFCYSTKCYYFIMNK-TTWSGCKANCQHYGVPILKIEDEDELKFLQRHVI-----PGNYWIGLSYDK------  144 (203)
T ss_dssp             CCCCCEEEEEEETEEEEEEEEE-ECHHHHHHHHHHTTCCBCCCCSHHHHHHHHHHSC-----SSCEEEEEEEET------
T ss_pred             CCCCCCCcEEeCCEEEEEECCC-CCHHHHHHHHHhCCCEeeeeCCHHHHHHHHHhcC-----CCCEEEeeeecC------
Confidence            5689999999999999999995 9999999999999999999999999999999874     345666666432      


Q ss_pred             cCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecch
Q psy14885        106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASI  184 (483)
Q Consensus       106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~~  184 (483)
                                      .++.|.|+||+++.   .+|.+ +|+. +.++|+.+...    .|++.+|+  ..++||||+++
T Consensus       145 ----------------~~~~w~W~DGs~~~---~~w~~~~pn~-~~~~Cv~l~~~----~W~d~~C~--~~~~fICe~~~  198 (203)
T 3c8j_A          145 ----------------KKKEWAWIDNGPSK---LDMKIKKMNF-KSRGCVFLSKA----RIEDIDCN--IPYYCICGKKL  198 (203)
T ss_dssp             ----------------TTTEEEETTSCCCT---THHHHHTTCC-CSSSEEEECSS----CEEEECTT--SCEEEEEEEEC
T ss_pred             ----------------CCCceEECCCCCCC---CCCCCCCCCC-CCCCcEEEECC----cEECcCCC--CCEEEEEeECC
Confidence                            46889999999986   36988 8874 46899999642    59999999  99999999986


Q ss_pred             h
Q psy14885        185 Q  185 (483)
Q Consensus       185 ~  185 (483)
                      .
T Consensus       199 ~  199 (203)
T 3c8j_A          199 D  199 (203)
T ss_dssp             S
T ss_pred             c
Confidence            4

>2msb_A Mannose-binding protein-A; lectin; HET: BMA MAN; 1.70A {Rattus rattus} SCOP: d.169.1.1 PDB: 1msb_A 1ytt_A*

Probab=99.87  E-value=4.1e-22  Score=167.13  Aligned_cols=112  Identities=16%  Similarity=0.188  Sum_probs=93.9

Q ss_pred             cCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccCcccccccc
Q psy14885         36 YRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWY  115 (483)
Q Consensus        36 ~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~~~~~~~w~  115 (483)
                      ++++||+++... ++|.+|+..|+.+||+|++|+|++|++||..++.      ..||||+++..                
T Consensus         1 ig~~Cy~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~------~~~WiGl~~~~----------------   57 (115)
T 2msb_A            1 SGKKFFVTNHER-MPFSKVKALCSELRGTVAIPRNAEENKAIQEVAK------TSAFLGITDEV----------------   57 (115)
T ss_dssp             ---CEEEEEEEE-ECHHHHHHHHHHTTCEECCCSSHHHHHHHHHHHS------SCEEEEEECSS----------------
T ss_pred             CCCEEEEEeCCC-cCHHHHHHHHHhCCCEEeccCCHHHHHHHHHhhc------CCEEEeeEcCC----------------
Confidence            367899999995 9999999999999999999999999999999883      45677766432                


Q ss_pred             cCCcCCCCCccccCCCCccccccccCCC-CCCCc-ccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885        116 FGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADN-VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS  183 (483)
Q Consensus       116 ~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~-~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~  183 (483)
                            .++.|.|+||+++.+  .+|.+ +|++. +.++|+.+...   +.|++.+|+  ..++||||++
T Consensus        58 ------~~~~w~W~dg~~~~~--~~W~~~~P~~~~~~~~C~~~~~~---g~W~~~~C~--~~~~fiCe~~  114 (115)
T 2msb_A           58 ------TEGQFMYVTGGRLTY--SNWKKDEPNDHGSGEDCVTIVDN---GLWNDISCQ--ASHTAVCEFP  114 (115)
T ss_dssp             ------STTCCEETTSSBCCS--CCBCTTCCCCCTTCCCEEEECTT---SCEEEECTT--SCEEEEEEEC
T ss_pred             ------CCCcEEECCCCEeee--cCcCCCCCCCCCCCCCeEEECCC---CCEECcCCC--CCeEEEEeEc
Confidence                  567899999999975  89999 99873 46899999732   369999999  9999999987

>3p1g_A Xenotropic murine leukemia virus-related virus (X H domain; XMRV, RNAse H, reverse transcriptase, transcription; 1.50A {Xenotropic mulv-related virus} PDB: 3v1q_A 3v1o_A 3v1r_A* 2hb5_A 4e89_A

Probab=99.86  E-value=3.3e-22  Score=177.61  Aligned_cols=125  Identities=20%  Similarity=0.147  Sum_probs=93.5

Q ss_pred             cceEe-eCCCC--CCCceEEEEEeCCCEEE---eCCCCCcchHHHHHHHHHHHHHhHhcCCceEEEEeccHHHHHhhccc
Q psy14885        220 TDVVF-DLSKR--NSNTGFAFIINNENFQY---RLPHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGIDNI  293 (483)
Q Consensus       220 ~~~~~-DgS~~--~~~~G~g~~~~~~~~~~---~l~~~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs~~~~~~l~~~  293 (483)
                      ..++| |||+.  +|..|+|+++...+...   .+...+||++||+.|++.||+.+   ...++.|+|||++|++.|-..
T Consensus        23 ~i~iytDGs~~~npG~~g~G~vi~~~~~~~~~~~~~~~~Tnn~aEl~Ai~~AL~~~---~~~~v~I~tDS~~vi~~iw~~   99 (165)
T 3p1g_A           23 DYTWYTDGSSFLQEGQRRAGAAVTTETEVIWARALPAGTSAQRAELIALTQALKMA---EGKKLNVYTDSRYAFATAHVH   99 (165)
T ss_dssp             SEEEEEEEEEEEETTEEEEEEEEECSSCEEEEEEECTTCCHHHHHHHHHHHHHHHT---BTSEEEEEECCHHHHHHHHSC
T ss_pred             CEEEEEEcccCCCCCceEEEEEEEECCEEEEEecCCCCCcHHHHHHHHHHHHHHHc---cCceEEEEEchHHHHhhhhcc
Confidence            35667 99997  48899999887654322   34577899999999999999999   368999999999999998321


Q ss_pred             CCcchH-HHHHHHHHHHHhhCCCceEEEEeccCCC-----CcchHHHhHHHHhhhcCCCC
Q psy14885        294 QQRNNI-IQLIKQEYYFASTNGSQISFMWIPSHSN-----IALNDKADQLAKNSINSKLL  347 (483)
Q Consensus       294 ~~~~~~-~~~i~~~~~~~~~~~~~v~~~WvpgH~g-----~~gNe~AD~lAk~a~~~~~~  347 (483)
                      ..+.++ ...+++.+......+..|+|.|||||+|     ++|||.||+|||+|+..+.+
T Consensus       100 ~~g~~v~n~dl~~~l~~~l~~~~~v~~~wVkgH~g~~~~~~~gNe~AD~LA~~aa~~~~~  159 (165)
T 3p1g_A          100 SEGREIKNKNEILALLKALFLPKRLSIIHCPGHQKGNSAEARGNRMADQAAREAAMKAVL  159 (165)
T ss_dssp             CCSCCCSSHHHHHHHHHHTTSBSEEEEEECCSSCCSCSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCCCcccCHHHHHHHHHHHhcCCceEEEEecCCCCCCcCcchHHHHHHHHHHHHHhcCCC
Confidence            111111 0222222222223678999999999999     99999999999999987544

>2e4l_A Ribonuclease HI, RNAse HI; hydrolase, endoribonuclease; 2.00A {Shewanella oneidensis} PDB: 2zqb_A

Probab=99.86  E-value=4.2e-22  Score=176.61  Aligned_cols=123  Identities=20%  Similarity=0.224  Sum_probs=93.1

Q ss_pred             CcceEe-eCCCCC--CCceEEEEEeCCCEEEeC---CCCCcchHHHHHHHHHHHHHhHhcCCceEEEEeccHHHHHhhcc
Q psy14885        219 PTDVVF-DLSKRN--SNTGFAFIINNENFQYRL---PHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGIDN  292 (483)
Q Consensus       219 p~~~~~-DgS~~~--~~~G~g~~~~~~~~~~~l---~~~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs~~~~~~l~~  292 (483)
                      ...++| |||+.+  +++|+|+++.+.+....+   .+.+||++||+.|++.||+.+.+  ..++.|+|||++|++.|.+
T Consensus         5 ~~i~iytDGs~~~n~g~~G~G~v~~~~~~~~~~~~~~~~~tn~~aEl~A~~~AL~~~~~--~~~v~I~tDS~~vi~~i~~   82 (158)
T 2e4l_A            5 KLIHIFTDGSCLGNPGPGGYGIVMNYKGHTKEMSDGFSLTTNNRMELLAPIVALEALKE--PCKIILTSDSQYMRQGIMT   82 (158)
T ss_dssp             CEEEEEEEEEESSSSEEEEEEEEEEETTEEEEEEEEEEEECHHHHHHHHHHHHHHTCSS--CCEEEEEECCHHHHHHHHT
T ss_pred             CeEEEEEcccccCCCCcEEEEEEEEECCEEEEEecCcCCCccHHHHHHHHHHHHHHhcc--CCeEEEEeCHHHHHHHHHH
Confidence            445667 999974  788999999765432211   14579999999999999999864  3899999999999999987


Q ss_pred             --------cCCc---chH-HHHHHHHHHHHhhCCCceEEEEeccCCCCcchHHHhHHHHhhhcC
Q psy14885        293 --------IQQR---NNI-IQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAKNSINS  344 (483)
Q Consensus       293 --------~~~~---~~~-~~~i~~~~~~~~~~~~~v~~~WvpgH~g~~gNe~AD~lAk~a~~~  344 (483)
                              .+..   .++ ...+++.+..+.. ...|.|.|||||+|+++||.||+|||+|+..
T Consensus        83 w~~~W~~n~~~~~~g~~v~n~~l~~~i~~l~~-~~~v~~~wV~gH~g~~~Ne~AD~LAk~a~~~  145 (158)
T 2e4l_A           83 WIHGWKKKGWMTSNRTPVKNVDLWKRLDKAAQ-LHQIDWRWVKGHAGHAENERCDQLARAAAEA  145 (158)
T ss_dssp             HHHHHHHTTTBCTTSSBCTTHHHHHHHHHHHT-TSEEEEEECCTTCCCHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHccccccCCCcccCHHHHHHHHHHHc-cCcEEEEEccCCCCchhHHHHHHHHHHHHHh
Confidence                    3321   111 1233334444444 4699999999999999999999999999987

>1jl1_A Ribonuclease HI; RNAse HI, protein stability, thermostability, hydrogen exchange, cooperativity, hydrolase; 1.30A {Escherichia coli} SCOP: c.55.3.1 PDB: 1f21_A 1jxb_A 1g15_A 1rch_A 1rdd_A 1rnh_A* 2rn2_A 1rda_A 1law_A 1rdb_A 1lav_A 3aa4_A 1rbu_A 1gob_A 1rdc_A 1kvc_A 3aa3_A 3aa2_A 3aa5_X 1rbv_A ...

Probab=99.86  E-value=5.6e-22  Score=175.28  Aligned_cols=125  Identities=18%  Similarity=0.228  Sum_probs=94.7

Q ss_pred             cceEe-eCCCCC--CCceEEEEEeCCCEEEeC---CCCCcchHHHHHHHHHHHHHhHhcCCceEEEEeccHHHHHhhcc-
Q psy14885        220 TDVVF-DLSKRN--SNTGFAFIINNENFQYRL---PHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGIDN-  292 (483)
Q Consensus       220 ~~~~~-DgS~~~--~~~G~g~~~~~~~~~~~l---~~~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs~~~~~~l~~-  292 (483)
                      ..++| |||+.+  +++|+|+++.+.+....+   .+.+||++||+.|++.||+.+.+  ..++.|+|||++|++.|.+ 
T Consensus         4 ~~~iytDGs~~~n~~~~G~G~v~~~~~~~~~~~~~~~~~tn~~aEl~A~~~aL~~~~~--~~~v~I~tDS~~vi~~i~~w   81 (155)
T 1jl1_A            4 QVEIFTAGSALGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMELMAAIVALEALKE--HAEVILSTDSQYVRQGITQW   81 (155)
T ss_dssp             CEEEEEEEEESSTTEEEEEEEEEEETTEEEEEEEEEEEECHHHHHHHHHHHHHHTCCS--CCEEEEEECCHHHHHHHHTT
T ss_pred             eEEEEEccccCCCCCceEEEEEEEECCeEEEEecCCCCCcHHHHHHHHHHHHHHHhCc--CCcEEEEeCHHHHHHHHHHH
Confidence            45566 999975  778999999765432222   14678999999999999999974  4899999999999999986 


Q ss_pred             -------cCCc---chH-HHHHHHHHHHHhhCCCceEEEEeccCCCCcchHHHhHHHHhhhcCCCC
Q psy14885        293 -------IQQR---NNI-IQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAKNSINSKLL  347 (483)
Q Consensus       293 -------~~~~---~~~-~~~i~~~~~~~~~~~~~v~~~WvpgH~g~~gNe~AD~lAk~a~~~~~~  347 (483)
                             .+..   .++ ...+++.+..+.. ...|.|.|||||+|+++||.||+|||+|+..+..
T Consensus        82 ~~~W~~n~~~~~~g~~v~n~~l~~~i~~l~~-~~~v~~~wV~gH~g~~~Ne~AD~LA~~a~~~~~~  146 (155)
T 1jl1_A           82 IHNWKKRGWKTADKKPVKNVDLWQRLDAALG-QHQIKWEWVKGHAGHPENERADELARAAAMNPTL  146 (155)
T ss_dssp             HHHHHHTTTBCTTSCBCTTHHHHHHHHHHTT-TCEEEEEECCSSTTCHHHHHHHHHHHHHHHSCCB
T ss_pred             HHHHhhcccccccCCccCCHHHHHHHHHHHc-cCceEEEEcCCCCCCHHHHHHHHHHHHHHhccch
Confidence                   2211   111 1233444444544 4699999999999999999999999999987643

>3g8l_A Lectin-related NK cell receptor LY49L1; natural killer cell receptor, immune system; 2.50A {Mus musculus}

Probab=99.86  E-value=4e-22  Score=182.55  Aligned_cols=123  Identities=18%  Similarity=0.270  Sum_probs=102.3

Q ss_pred             cCCCcc-cccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccc
Q psy14885         26 ELRCPQ-HWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV  104 (483)
Q Consensus        26 ~~~C~~-gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wi  104 (483)
                      ...||+ ||+.|+++||+++... ++|.+|+..|++.||+||+|+|.+|++||..++.     ...||||+++..     
T Consensus        63 ~~~Cp~~gW~~~~~~CY~~~~~~-~tw~~A~~~C~~~g~~LasI~s~~e~~fl~~~~~-----~~~~WIGl~~~~-----  131 (190)
T 3g8l_A           63 TGRGFEKYWFCYGIKCYYFVMDR-KTWSGCKQTCQISSLSLLKIDNEDELKFLKLLVP-----SDSYWIGLSYDN-----  131 (190)
T ss_dssp             TTCEEEEEEEEEETEEEEEEEEE-ECHHHHHHHHHHTTCEECCCCSHHHHHHHHHHSC-----SSCEEEEEEEET-----
T ss_pred             CCCCCCCCcEEECCEEEEEEccc-CCHHHHHHHHHhCCCEEeeeCCHHHHHHHHHhhC-----cCCEEEEEEcCC-----
Confidence            577999 9999999999999995 9999999999999999999999999999999874     345666666432     


Q ss_pred             ccCcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeecch
Q psy14885        105 NEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASI  184 (483)
Q Consensus       105 g~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~~  184 (483)
                                       .++.|.|+||+++.+  .+|.+.|.. +.++||.+..    +.|.+.+|.  ..++||||++.
T Consensus       132 -----------------~~~~w~W~DGs~~~~--~~~~~~~~~-~~~~Cv~l~~----~~W~d~~C~--~~~~fICek~~  185 (190)
T 3g8l_A          132 -----------------KKKDWAWINNGPSKL--ALNTMKYNI-RDGGCMLLSK----TRLDNDNCD--KSFICICGKRL  185 (190)
T ss_dssp             -----------------TTTEEEETTTBCCCC--CCCGGGCCG-GGCSEEEECS----SCEEEECTT--SCEEEEEEEEC
T ss_pred             -----------------CCCceEeCCCCcccc--cccCCCCCC-CCCCeEEEeC----CcEECCCCC--CCeeEEEeeCC
Confidence                             467899999998765  567663332 3589999953    259999999  99999999985


Q ss_pred             h
Q psy14885        185 Q  185 (483)
Q Consensus       185 ~  185 (483)
                      .
T Consensus       186 ~  186 (190)
T 3g8l_A          186 D  186 (190)
T ss_dssp             C
T ss_pred             C
Confidence            3

>1rdl_1 SUB-MBP-C, mannose-binding protein-C; C-type lectin, calcium-binding protein; HET: MMA; 1.70A {Rattus rattus} SCOP: d.169.1.1 PDB: 1rdj_1* 1rdk_1* 1rdi_1* 1rdm_1* 1rdn_1* 1rdo_1 1bv4_A 1kza_1* 1kzb_1* 1kzc_1* 1kzd_1* 1kze_1*

Probab=99.85  E-value=2.1e-21  Score=162.29  Aligned_cols=110  Identities=19%  Similarity=0.306  Sum_probs=93.7

Q ss_pred             CeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccCcccccccccC
Q psy14885         38 DSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFG  117 (483)
Q Consensus        38 ~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~~~~~~~w~~~  117 (483)
                      .+||+++... ++|.+|+..|+..||+|++|+|.+|++||..++      ...+|||+++..                  
T Consensus         1 ~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~------~~~~WIGl~~~~------------------   55 (113)
T 1rdl_1            1 KKYFMSSVRR-MPLNRAKALCSELQGTVATPRNAEENRAIQNVA------KDVAFLGITDQR------------------   55 (113)
T ss_dssp             -CEEEECSSC-BCHHHHHHHHHHTTCEECCCCSHHHHHHHHHHC------SSCEEEEEECSS------------------
T ss_pred             CeEEEEeCCc-cCHHHHHHHHHhcCCEEcccCCHHHHHHHHHHh------cCCEEEEeECCC------------------
Confidence            3699999995 999999999999999999999999999999887      245677776432                  


Q ss_pred             CcCCCCCccccCCCCccccccccCCC-CCCCc-ccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885        118 GTQQSPNLWVNEDGTNLNELDAAFLP-EPADN-VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS  183 (483)
Q Consensus       118 g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~-~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~  183 (483)
                          .++.|.|+||+++.+  .+|.+ +|++. +.++|+.+...   +.|++.+|+  ..++||||++
T Consensus        56 ----~~~~~~W~dg~~~~y--~~W~~~~P~~~~~~~~Cv~~~~~---g~w~~~~C~--~~~~~ICe~~  112 (113)
T 1rdl_1           56 ----TENVFEDLTGNRVRY--TNWNEGEPNNVGSGENCVVLLTN---GKWNDVPCS--DSFLVVCEFS  112 (113)
T ss_dssp             ----STTCCEETTSCBCCC--CCBCTTCCCCCTTCCCEEEECTT---SCEEEECTT--SCBEEEEEEC
T ss_pred             ----CCCcEEECCCCEeec--CCCCCCcCCCCCCCCCeeEECCC---CcEeccCCC--CCceEEEeeC
Confidence                468899999999965  89999 99873 46899999743   369999999  9999999986

>1wk1_A Hypothetical protein YK1067A12; lectin C-type domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Caenorhabditis elegans} SCOP: d.169.1.1

Probab=99.85  E-value=1.1e-21  Score=172.53  Aligned_cols=118  Identities=19%  Similarity=0.292  Sum_probs=99.9

Q ss_pred             ccCCeEEEEecCCC---CCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccCcccc
Q psy14885         35 QYRDSCYRFVKSPL---KTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQR  111 (483)
Q Consensus        35 ~~~~~Cy~~~~~~~---~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~~~~~  111 (483)
                      +|+++||+++.. .   ++|.+|+..|+.+||+|++|++++|++||..++..     ..||||+++ .            
T Consensus         2 ~~~~~CY~~~~~-~~~~~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~-----~~~WIGl~~-~------------   62 (150)
T 1wk1_A            2 SSGSSGVKFLTV-NDDILSMPQARNFCASAGGYLADDLGDDKNNFYSSIAAN-----TQFWIGLFK-N------------   62 (150)
T ss_dssp             CCSSCCCCSSSC-CSSCBCHHHHHHHHHHHTCEECCCCSHHHHHHHHHHTTT-----CEEEEEEEE-C------------
T ss_pred             ccCCEEEEEEec-CCCccCHHHHHHHHHhCCCEEeeeCCHHHHHHHHHhhcc-----CCEEEEEEe-C------------
Confidence            478999999988 7   99999999999999999999999999999999853     357888875 4            


Q ss_pred             cccccCCcCCCCCccccCCCCccc------cccccCCC-CCCCcccCCeEEEecc--cccccccccccCCCCceeeeeec
Q psy14885        112 RKWYFGGTQQSPNLWVNEDGTNLN------ELDAAFLP-EPADNVQRDYLAYSFS--QSLKRWGFERVTGMEPLLFICEA  182 (483)
Q Consensus       112 ~~w~~~g~~~~~~~~~W~dg~~~~------~~~~~w~~-~P~~~~~~~Cv~~~~~--~~~~~W~~~~C~~~~~~~fvCe~  182 (483)
                                .++.|.|+||+++.      .| .+|.+ +|++.+.++||.+...  ...+.|++.+|+  ..++||||+
T Consensus        63 ----------~~~~w~W~dg~~~~~~~~~~~y-~~W~~geP~~~~~~~Cv~~~~~~~~~~~~W~d~~C~--~~~~fICe~  129 (150)
T 1wk1_A           63 ----------SDGQFYWDRGQGINPDLLNQPI-TYWANGEPSNDPTRQCVYFDGRSGDKSKVWTTDTCA--TPRPFICQK  129 (150)
T ss_dssp             ----------SSSCEEECCSSSSCCEECCCSC-CCBCTTCSCCCSSCCEEEEESSCSCGGGCEEEECTT--SCBCCCEEC
T ss_pred             ----------CCCcEEeCCCCccccccccCCc-CCCCCCCCCCCCCCCcEEEeCccCCCCCEEeCcCcC--CCeeEEEee
Confidence                      46789999999883      33 89999 9998557899999742  122469999999  999999999


Q ss_pred             ch
Q psy14885        183 SI  184 (483)
Q Consensus       183 ~~  184 (483)
                      ++
T Consensus       130 ~~  131 (150)
T 1wk1_A          130 HR  131 (150)
T ss_dssp             CC
T ss_pred             cC
Confidence            84

>1pwb_A SP-D, PSP-D, pulmonary surfactant-associated protein D; collectin, C-type lectin, alpha-helical coiled coil, carbohydrate recognition domain; HET: GLC; 1.40A {Homo sapiens} SCOP: d.169.1.1 h.1.1.1 PDB: 1pw9_A* 3ikn_A* 3ikp_A* 3ikq_A* 3ikr_A* 2rie_A* 2ggx_A* 2ggu_A* 2ork_A* 2orj_A* 2ria_A* 2rib_A* 2ric_A* 2rid_A* 2os9_A* 3dbz_A 3g81_A* 3g83_A* 1b08_A 3g84_A* ...

Probab=99.85  E-value=1.1e-21  Score=177.55  Aligned_cols=122  Identities=17%  Similarity=0.253  Sum_probs=102.8

Q ss_pred             CCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccC
Q psy14885         28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNED  107 (483)
Q Consensus        28 ~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~  107 (483)
                      .|+.+|+.++++||+++... ++|.+|+..|+..||+||+|+|.+|++||..++...   ...||||+++.         
T Consensus        54 ~~~~~~~~~~~~Cy~~~~~~-~~w~~A~~~C~~~gg~La~i~s~~e~~~l~~~~~~~---~~~~WIGl~~~---------  120 (177)
T 1pwb_A           54 ELFPNGQSVGEKIFKTAGFV-KPFTEAQLLCTQAGGQLASPRSAAENAALQQLVVAK---NEAAFLSMTDS---------  120 (177)
T ss_dssp             HHTTTEEEETTEEEEEEEEE-EEHHHHHHHHHHTTSEECCCCSHHHHHHHHHHHHHH---TCCEECSCBCS---------
T ss_pred             hcCCCeEEECCEEEEEcCCc-cCHHHHHHHHHhcCCEEcccCCHHHHHHHHHHHhcC---CCcEEEEEecc---------
Confidence            46789999999999999884 999999999999999999999999999999988543   24455555432         


Q ss_pred             cccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCc-ccCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885        108 DPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADN-VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA  182 (483)
Q Consensus       108 ~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~-~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~  182 (483)
                                   ..++.|.|+||+++.+  .+|.+ +|++. +.++||.+...   +.|+|.+|+  ..++||||+
T Consensus       121 -------------~~~~~w~W~dG~~~~y--~~W~~geP~~~~~~~~Cv~~~~~---g~W~d~~C~--~~~~fICe~  177 (177)
T 1pwb_A          121 -------------KTEGKFTYPTGESLVY--SNWAPGEPNDDGGSEDCVEIFTN---GKWNDRACG--EKRLVVCEF  177 (177)
T ss_dssp             -------------SSTTCCBCTTSCBCSC--CCBCTTCCCCGGGCCCEEEECTT---SCEEEECTT--SEEEEEEEC
T ss_pred             -------------CcCCceEeCCcCCccc--CCcCCCcCCCCCCCCCcEEECCC---CcEeCCCCC--CCeeEEEeC
Confidence                         2578899999999965  89999 99984 46899999642   369999999  999999995

>1h8u_A MBP, eosinophil granule major basic protein 1; lectin, eosinophil granule protein, EMBP; 1.8A {Homo sapiens} SCOP: d.169.1.1 PDB: 2brs_A*

Probab=99.85  E-value=2e-21  Score=163.31  Aligned_cols=114  Identities=19%  Similarity=0.304  Sum_probs=94.5

Q ss_pred             eE-EEEecCCCCCHHHHHHHhhh-cCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccCccccccccc
Q psy14885         39 SC-YRFVKSPLKTRNDAKLNCKS-LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYF  116 (483)
Q Consensus        39 ~C-y~~~~~~~~tw~~A~~~C~~-~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~~~~~~~w~~  116 (483)
                      +| |+++... ++|.+|+..|+. .||+||+|+|.+|++||..++...  ....||||+++..                 
T Consensus         1 ~C~Y~~~~~~-~tw~~A~~~C~~~~g~~La~i~s~~e~~~l~~~~~~~--~~~~~WIGl~~~~-----------------   60 (117)
T 1h8u_A            1 TCRYLLVRSL-QTFSQAWFTCRRCYRGNLVSIHNFNINYRIQCSVSAL--NQGQVWIGGRITG-----------------   60 (117)
T ss_dssp             --CEEEEEEE-ECHHHHHHHHHHHHSSEECCCCSHHHHHHHHHHHTTC--SSSEEEEEEEEEC-----------------
T ss_pred             CeEEEEeCCc-cCHHHHHHHhccCCCCeEEeecCHHHHHHHHHHHhcc--CCCCEEEcccccC-----------------
Confidence            49 9999995 999999999999 999999999999999999998644  2456777776421                 


Q ss_pred             CCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885        117 GGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA  182 (483)
Q Consensus       117 ~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~  182 (483)
                         ...++.|.|+||+++.+  .+|.+ +|++. +++|+.+....+  .|++.+|+  ..++||||+
T Consensus        61 ---~~~~~~~~W~dg~~~~y--~~W~~~~P~~~-~~~C~~~~~~~g--~W~~~~C~--~~~~fiCe~  117 (117)
T 1h8u_A           61 ---SGRCRRFQWVDGSRWNF--AYWAAHQPWSR-GGHCVALCTRGG--YWRRAHCL--RRLPFICSY  117 (117)
T ss_dssp             ---SSSCCEEEETTCCCCCC--CCBCSSSCCTT-SCSEEEEETTTT--CEEEECTT--SCEEEEEEC
T ss_pred             ---CCCCCccEeCCCCcCCc--cCcCCCCCCCC-CCCCeEEECCCC--cCCCCCCC--CCcceeEeC
Confidence               12468899999999875  88999 99874 589999986543  59999999  999999995

>3pbf_A Pulmonary surfactant-associated protein A; collectin, carbohydrate binding, lectin, mannose, sugar BIND protein; 1.80A {Rattus norvegicus} PDB: 1r14_A* 1r13_A* 3paq_A* 3par_A 3pak_A

Probab=99.84  E-value=3.1e-21  Score=169.29  Aligned_cols=121  Identities=15%  Similarity=0.205  Sum_probs=102.4

Q ss_pred             CcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccCc
Q psy14885         29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDD  108 (483)
Q Consensus        29 C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~~  108 (483)
                      +......|+++||+++... ++|.+|+..|+..||+|++|+|.+|++||..++....   ..||||+++..         
T Consensus        27 ~~~~~~~~~~~Cy~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~~---~~~WIGl~~~~---------   93 (148)
T 3pbf_A           27 LQGSMLSVGDKVFSTNGQS-VNFDTIKEMCTRAGGNIAVPRTPEENEAIASIAKKYN---NYVYLGMIEDQ---------   93 (148)
T ss_dssp             HTTSCEEETTEEEEEEEEE-ECHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHHHHT---SCEEEEEEECS---------
T ss_pred             HHhcceeeCCEEEEEcCCc-cCHHHHHHHHhhcCCEEeeeCCHHHHHHHHHHHHhCC---CCEEEEeEecC---------
Confidence            3455678999999999995 9999999999999999999999999999999987542   35666666432         


Q ss_pred             ccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885        109 PQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA  182 (483)
Q Consensus       109 ~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~  182 (483)
                                   ..+.|.|+||+++.+  .+|.+ +|++.+.++|+.+...   +.|.+.+|+  ..++||||.
T Consensus        94 -------------~~~~w~W~dg~~~~~--~~W~~~~P~~~~~~~Cv~~~~~---g~W~~~~C~--~~~~fICe~  148 (148)
T 3pbf_A           94 -------------TPGDFHYLDGASVSY--TNWYPGEPRGQGKEKCVEMYTD---GTWNDRGCL--QYRLAVCEF  148 (148)
T ss_dssp             -------------STTCEEETTSCBCCS--CCBCTTCCCSTTSCCEEEECTT---SCEEEECSC--SCEEEEEEC
T ss_pred             -------------CCCceEeCCCCCccc--CCcCCCccCcCCCCCceEECCC---CcEecCCCC--CCeeEeeeC
Confidence                         467899999999966  89999 9998656899999763   369999999  999999984

>1byf_A TC14, protein (polyandrocarpa lectin); C-type lectin, galactose-specific, sugar binding protein; 2.00A {Polyandrocarpa misakiensis} SCOP: d.169.1.1 PDB: 1tlg_A*

Probab=99.84  E-value=4.9e-21  Score=162.99  Aligned_cols=115  Identities=17%  Similarity=0.209  Sum_probs=93.9

Q ss_pred             CCeEEEEecCCCCCHHHHHHHhhhcCCcccc--cCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccCccccccc
Q psy14885         37 RDSCYRFVKSPLKTRNDAKLNCKSLDSDLAN--VNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKW  114 (483)
Q Consensus        37 ~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~--i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~~~~~~~w  114 (483)
                      +++||+++... ++|.+|+..|+..||+||+  |++.+|++||..+ ...  ....||||+ +..               
T Consensus         1 g~~Cy~~~~~~-~~w~~A~~~C~~~g~~La~~~i~s~~e~~~l~~~-~~~--~~~~~WIGl-~~~---------------   60 (125)
T 1byf_A            1 MDYEILFSDET-MNYADAGTYCQSRGMALVSSAMRDSTMVKAILAF-TEV--KGHDYWVGA-DNL---------------   60 (125)
T ss_dssp             -CEEEEEEEEE-ECHHHHHHHHHTTTCEESCGGGGSHHHHHHHHHH-HHH--HTCCEEEEE-EST---------------
T ss_pred             CCeEEEEeCCC-CCHHHHHHHHHHcCCEeeecCCCCHHHHHHHHHh-cCC--CCCCEEEec-ccC---------------
Confidence            47899999995 9999999999999999999  9999999999988 211  234566666 332               


Q ss_pred             ccCCcCCCCCc--cccCCCCcc-ccccc-cCCC-CCCCcc-cCCeEEEecccccccccccccCCCCceeeeeecch
Q psy14885        115 YFGGTQQSPNL--WVNEDGTNL-NELDA-AFLP-EPADNV-QRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASI  184 (483)
Q Consensus       115 ~~~g~~~~~~~--~~W~dg~~~-~~~~~-~w~~-~P~~~~-~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~~  184 (483)
                             .++.  |.|+||+++ .+  . +|.+ +|++.. .++|+.+. ..+ +.|++.+|.  ..++||||+++
T Consensus        61 -------~~~~~~w~W~dg~~~~~~--~~~W~~~~P~~~~~~~~Cv~~~-~~~-~~W~d~~C~--~~~~fICe~~~  123 (125)
T 1byf_A           61 -------QDGAYNFLWNDGVSLPTD--SDLWSPNEPSNPQSWQLCVQIW-SKY-NLLDDVGCG--GARRVICEKEL  123 (125)
T ss_dssp             -------TTCTTCCEETTSCBCCTT--CTTBCTTCSCSCTTSCCEEEEE-TTT-TEEEEECSC--SCEEEEEEEEC
T ss_pred             -------CCCceeEEECCCCCCccc--ccCcCCCcCCCCCCCCCceEEE-CCC-CcEECcCCC--CceeEEEeeeC
Confidence                   4667  999999998 54  7 8999 998743 57999998 322 369999999  99999999984

>1ril_A Ribonuclease H; hydrolase(endoribonuclease); 2.80A {Thermus thermophilus} SCOP: c.55.3.1 PDB: 2rpi_A

Probab=99.83  E-value=1.8e-21  Score=173.83  Aligned_cols=124  Identities=13%  Similarity=0.163  Sum_probs=92.7

Q ss_pred             cceEe-eCCCCC--CCceEEEEEeCCCEEEeC---CCCCcchHHHHHHHHHHHHHhHhcCCceEEEEeccHHHHHhhcc-
Q psy14885        220 TDVVF-DLSKRN--SNTGFAFIINNENFQYRL---PHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGIDN-  292 (483)
Q Consensus       220 ~~~~~-DgS~~~--~~~G~g~~~~~~~~~~~l---~~~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs~~~~~~l~~-  292 (483)
                      ..++| |||+.+  +.+|+|+++.+.+....+   ...+||++||+.|++.||+.+.+  ..+|.|+|||++|++.|.+ 
T Consensus         8 ~i~iytDGs~~~n~g~~G~G~v~~~~~~~~~~~~~~~~~Tnn~aEl~Ai~~AL~~~~~--~~~v~I~tDS~~vi~~i~~~   85 (166)
T 1ril_A            8 RVALFTDGACLGNPGPGGWAALLRFHAHEKLLSGGEACTTNNRMELKAAIEGLKALKE--PCEVDLYTDSHYLKKAFTEG   85 (166)
T ss_dssp             CCCEEEEEEESSTTEEEEEEEEECBTTBCCEECCEEEEECHHHHHHHHHHHHHHSCCS--CCEEEEECCCHHHHHHHHSS
T ss_pred             cEEEEECccccCCCCCEEEEEEEEECCEEEEEecCCCCCcHHHHHHHHHHHHHHHhcc--CCeEEEEeChHHHHHHHhhh
Confidence            44566 999975  778999999754322111   14679999999999999998864  3589999999999999988 


Q ss_pred             --------cCCc---chH-HHHHHHHHHHHhhCCCceEEEEeccCCCCcchHHHhHHHHhhhcCCC
Q psy14885        293 --------IQQR---NNI-IQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAKNSINSKL  346 (483)
Q Consensus       293 --------~~~~---~~~-~~~i~~~~~~~~~~~~~v~~~WvpgH~g~~gNe~AD~lAk~a~~~~~  346 (483)
                              .+..   .++ ...+++.+..+.. ...|+|.|||||+|+++|+.||+|||+|+....
T Consensus        86 w~~~W~~~~w~~~~g~~v~n~~l~~~i~~l~~-~~~v~~~wV~gH~g~~~Ne~AD~LAk~a~~~~~  150 (166)
T 1ril_A           86 WLEGWRKRGWRTAEGKPVKNRDLWEALLLAMA-PHRVRFHFVKGHTGHPENERVDREARRQAQSQA  150 (166)
T ss_dssp             HHHHHHHTTSBCTTSSBCTTHHHHHHHHHHHT-TSEEECCCCCGGGSCTHHHHHHHHHHHHHTSSC
T ss_pred             HHHHHHhcccccccCCccCcHHHHHHHHHHHh-cCeEEEEEeeCCCCchhHHHHHHHHHHHHHHhh
Confidence                    2221   111 1234444444444 359999999999999999999999999998754

>2lsn_A Reverse transcriptase; RNAse H, viral protein; NMR {Simian foamy virus}

Probab=99.81  E-value=3.6e-20  Score=164.25  Aligned_cols=124  Identities=15%  Similarity=0.105  Sum_probs=87.7

Q ss_pred             CcceEe-eCCCCC--CC-----ceEEEEEeCCCE------EEeC-CCCCcchHHHHHHHHHHHHHhHhcCCceEEEEecc
Q psy14885        219 PTDVVF-DLSKRN--SN-----TGFAFIINNENF------QYRL-PHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDN  283 (483)
Q Consensus       219 p~~~~~-DgS~~~--~~-----~G~g~~~~~~~~------~~~l-~~~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs  283 (483)
                      ...++| |||+.+  |+     +|+|+++...+.      .+.. .+..+++.||+.|+..||+.+.+.+ .+|.|+|||
T Consensus         6 ~evviYTDGsc~gNpgp~~~~~aG~Gv~~~~~~~~~~~~~~~~~~tnn~te~~Aei~Al~~al~~al~~~-~~v~I~TDS   84 (165)
T 2lsn_A            6 YEGVFYTDGSAIKSPDPTKSNNAGMGIVHATYKPEYQVLNQWSIPLGNHTAQMAEIAAVEFACKKALKIP-GPVLVITDS   84 (165)
T ss_dssp             CSEEEEEEEEEEECSSCTTCEEEEEEEEEECCSSSCCEEEEEEEEESSCCHHHHHHHHHHHHHHHHHHSS-SCEEEEESC
T ss_pred             ceEEEEEcCCCCCCCCCCCCCcEEEEEEEEECCCccEEeccccCCchHHHHHHHHHHHHHHHHHHHhcCC-CeEEEEeCh
Confidence            456677 999865  44     899999864221      1222 2567788899999988888876543 579999999


Q ss_pred             HHHHHhhcc--------cCC---cchH-HHHHHHHHHHHhhCCCceEEEEeccCCCC------cchHHHhHHHHhhhc
Q psy14885        284 KSVLNGIDN--------IQQ---RNNI-IQLIKQEYYFASTNGSQISFMWIPSHSNI------ALNDKADQLAKNSIN  343 (483)
Q Consensus       284 ~~~~~~l~~--------~~~---~~~~-~~~i~~~~~~~~~~~~~v~~~WvpgH~g~------~gNe~AD~lAk~a~~  343 (483)
                      ++|++.|..        .+.   +.++ -..+++.+..+......|+|.|||||+|+      +|||.||+||++|+.
T Consensus        85 ~Yvi~~it~w~~~Wk~ngw~~~~~~pVkN~dL~~~l~~~~~~~~~v~~~~VkgH~g~~~~~~~~gNe~AD~LA~~gA~  162 (165)
T 2lsn_A           85 FYVAESANKELPYWKSNGFVNNKKKPLKHISKWKSIAECLSMKPDITIQHEKGHQPTNTSIHTEGNALADKLATQGSY  162 (165)
T ss_dssp             HHHHHHHHTHHHHHHHTTSCSCSSSCCSSHHHHHHHHHHHHHCTTCEEEECCSSSCSSSCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhhhhhhhhhheeccccccCCCcccCHHHHHHHHHHHhCCCCEEEEEEeCCCCccCCCCChHHHHHHHHHHHhhh
Confidence            999999964        111   1111 12333444444445678999999999994      689999999999874

>3hst_B Protein RV2228C/MT2287; ribonuclease H1, RV2228C N-terminal domain, fusion protein, maltose binding protein, HYDR; HET: MLR TAR; 2.25A {Mycobacterium tuberculosis}

Probab=99.80  E-value=2.5e-19  Score=155.77  Aligned_cols=120  Identities=17%  Similarity=0.250  Sum_probs=98.0

Q ss_pred             ceEe-eCCCCC--CCceEEEEEeCCC---E--EE-eCCCCCcchHHHHHHHHHHHHHhHhcCCceEEEEeccHHHHHhhc
Q psy14885        221 DVVF-DLSKRN--SNTGFAFIINNEN---F--QY-RLPHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGID  291 (483)
Q Consensus       221 ~~~~-DgS~~~--~~~G~g~~~~~~~---~--~~-~l~~~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs~~~~~~l~  291 (483)
                      .++| |||+.+  |.+|+|+++.+..   .  .+ ...+.+||++||+.|++.||+.+.+.+.+++.|+|||+++++.|.
T Consensus         4 ~~iy~DGs~~~~~g~~g~G~v~~~~~~~~~~~~~~~~~~~~tn~~aEl~A~~~aL~~a~~~~~~~v~i~tDS~~vv~~i~   83 (141)
T 3hst_B            4 VVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDAVKLGATEAAVLMDSKLVVEQMS   83 (141)
T ss_dssp             EEEEEEEEESSSSEEEEEEEEEEETTSCSEEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHT
T ss_pred             EEEEEecCCCCCCCCcEEEEEEEeCCCCcEEEeeeccCCCCchHHHHHHHHHHHHHHHHHCCCceEEEEeChHHHHHHHh
Confidence            3456 999875  6889999997632   1  11 112478999999999999999999888899999999999999999


Q ss_pred             ccCC-cchHHHHHHHHHHHHhhCCCceEEEEeccCCCCcchHHHhHHHHhhhcC
Q psy14885        292 NIQQ-RNNIIQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAKNSINS  344 (483)
Q Consensus       292 ~~~~-~~~~~~~i~~~~~~~~~~~~~v~~~WvpgH~g~~gNe~AD~lAk~a~~~  344 (483)
                      +.++ .+..+..+.+.+..+..++..|+|.|||+    ++|+.||+|||+|+..
T Consensus        84 ~~~~~~~~~l~~~~~~i~~l~~~~~~v~~~~V~~----~~N~~AD~LA~~a~~~  133 (141)
T 3hst_B           84 GRWKVKHPDLLKLYVQAQALASQFRRINYEWVPR----ARNTYADRLANDAMDA  133 (141)
T ss_dssp             TSSCCCSHHHHHHHHHHHHHHTTSSEEEEEECCG----GGCHHHHHHHHHHHHH
T ss_pred             CCcccCCHHHHHHHHHHHHHHhcCCeEEEEEcCC----cccHHHHHHHHHHHHH
Confidence            8764 45556666666777777789999999995    7999999999999865

>3u3g_D Ribonuclease H, RNAse H1; hydrolase, cleave the RNA strand of RNA/DNA hybrid; 1.40A {Uncultured organism}

Probab=99.79  E-value=2.8e-19  Score=155.06  Aligned_cols=120  Identities=16%  Similarity=0.243  Sum_probs=94.3

Q ss_pred             ceEe-eCCCCC--CCceEEEEEeCC-CE---EE-eCCCCCcchHHHHHHHHHHHHHhHhcCCc----eEEEEeccHHHHH
Q psy14885        221 DVVF-DLSKRN--SNTGFAFIINNE-NF---QY-RLPHEASIFTAEAIAIFYCIKKISDMKIK----KAIIFSDNKSVLN  288 (483)
Q Consensus       221 ~~~~-DgS~~~--~~~G~g~~~~~~-~~---~~-~l~~~~s~~~AEl~ai~~Al~~~~~~~~~----~~~I~tDs~~~~~  288 (483)
                      .++| |||+.+  |++|+|+++.+. +.   .+ ...+.+||++||+.|++.||+.+.+.+.+    ++.|+|||+++++
T Consensus         4 ~~iy~DGs~~~n~g~~G~G~v~~~~~g~~~~~~~~~~~~~tn~~aEl~A~~~aL~~a~~~~~~~~~~~v~i~tDS~~vi~   83 (140)
T 3u3g_D            4 IIIYTDGGARGNPGPAGIGVVITDEKGNTLHESSAYIGETTNNVAEYEALIRALEDLQMFGDKLVDMEVEVRMDSELIVR   83 (140)
T ss_dssp             EEEEEEEEESSTTEEEEEEEEEECTTSCEEEEEEEEEEEECHHHHHHHHHHHHHHHHGGGGGGGTTCEEEEEESCHHHHH
T ss_pred             EEEEEecCCCCCCCCcEEEEEEEeCCCCEEEEEEeeCCCCchHHHHHHHHHHHHHHHHHcCCCCCCceEEEEeChHHHHH
Confidence            4566 999965  789999999763 22   11 11245799999999999999999877777    9999999999999


Q ss_pred             hhcccCC-cchHHHHHHHHHHHH-hhCCCceEEEEeccCCCCcchHHHhHHHHhhhcC
Q psy14885        289 GIDNIQQ-RNNIIQLIKQEYYFA-STNGSQISFMWIPSHSNIALNDKADQLAKNSINS  344 (483)
Q Consensus       289 ~l~~~~~-~~~~~~~i~~~~~~~-~~~~~~v~~~WvpgH~g~~gNe~AD~lAk~a~~~  344 (483)
                      .|++.++ .+..+..+.+.+..+ ..+...|+|.|||    .++|+.||+|||+|+..
T Consensus        84 ~i~~~~~~~~~~l~~~~~~i~~l~~~~~~~v~~~~V~----~~~N~~AD~LA~~a~~~  137 (140)
T 3u3g_D           84 QMQGVYKVKEPTLKEKFAKIAHIKMERVPNLVFVHIP----REKNARADELVNEAIDK  137 (140)
T ss_dssp             HHTTSSCCCCGGGHHHHHHHHHHHHHHCTTCEEEECC----GGGGHHHHHHHHHHHHH
T ss_pred             HhCCCcccCCHHHHHHHHHHHHHhhcCCCcEEEEEcC----chhhHHHHHHHHHHHHh
Confidence            9998765 344444555556666 5666799999999    47999999999999864

>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}

Probab=99.76  E-value=6.1e-19  Score=157.44  Aligned_cols=115  Identities=16%  Similarity=0.331  Sum_probs=92.7

Q ss_pred             eEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccCcccccccccCC
Q psy14885         39 SCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGG  118 (483)
Q Consensus        39 ~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~~~~~~~w~~~g  118 (483)
                      .||+++... ++|.+|+..|+.+||+||+|++.+|++||..++..   ....||||++           +          
T Consensus         1 wcY~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~fl~~~~~~---~~~~~WIGl~-----------~----------   55 (164)
T 3cfw_A            1 WTYHYSEKP-MNWQRARRFCRDNYTDLVAIQNKAEIEYLEKTLPF---SRSYYWIGIR-----------K----------   55 (164)
T ss_dssp             CEEEEEEEE-ECHHHHHHHHHHHSSEECCCCSHHHHHHHHHHSCC---CTTCEEESEE-----------E----------
T ss_pred             CeEEEecCC-cCHHHHHHHHHHCCCEECccCCHHHHHHHHHHhcc---CCccEEEeEE-----------C----------
Confidence            499999994 99999999999999999999999999999998852   2334555554           3          


Q ss_pred             cCCCCCccccCCCC-ccc-cccccCCC-CCCCcc-cCCeEEEeccc--ccccccccccCCCCceeeeeecch
Q psy14885        119 TQQSPNLWVNEDGT-NLN-ELDAAFLP-EPADNV-QRDYLAYSFSQ--SLKRWGFERVTGMEPLLFICEASI  184 (483)
Q Consensus       119 ~~~~~~~~~W~dg~-~~~-~~~~~w~~-~P~~~~-~~~Cv~~~~~~--~~~~W~~~~C~~~~~~~fvCe~~~  184 (483)
                         .++.|.|+||+ ++. .| .+|.+ +|++.. .++||.+....  ..+.|++.+|+  ..++||||+++
T Consensus        56 ---~~~~~~W~dg~~~~~~~y-~~W~~geP~~~~~~~~Cv~~~~~~~~~~~~W~d~~C~--~~~~fICe~~~  121 (164)
T 3cfw_A           56 ---IGGIWTWVGTNKSLTEEA-ENWGDGEPNNKKNKEDCVEIYIKRNKDAGKWNDDACH--KLKAALCYTAS  121 (164)
T ss_dssp             ---ETTEEEETTTCCBCCTTT-CCBCTTCCCCGGGCCCEEEECTTCSSSTTCEEEECTT--SCEEEEEEECC
T ss_pred             ---CCCEEEECCCCccccccc-CCCCCCCCCCCCCCccceeeeccCCCCCCceeCCCCC--CCcEeEEccCC
Confidence               24689999998 443 23 88999 998764 68999997532  23469999999  99999999985

>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A

Probab=99.76  E-value=1.1e-18  Score=154.41  Aligned_cols=116  Identities=19%  Similarity=0.359  Sum_probs=92.3

Q ss_pred             eEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccCcccccccccCC
Q psy14885         39 SCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGG  118 (483)
Q Consensus        39 ~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~~~~~~~w~~~g  118 (483)
                      .||+++... ++|.+|+..|+.+||+||+|+|.+|++||..++...   ...||||++           +          
T Consensus         1 w~Y~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~---~~~~WIGl~-----------~----------   55 (157)
T 1g1t_A            1 WSYNTSTEA-MTYDEASAYCQQRYTHLVAIQNKEEIEYLNSILSYS---PSYYWIGIR-----------K----------   55 (157)
T ss_dssp             CEEEECSSC-BCHHHHHHHHHHHSSEECCCCSHHHHHHHHHHSCCC---TTCEEESEE-----------E----------
T ss_pred             CceEeCCCc-cCHHHHHHHHHHCCCEEcccCCHHHHHHHHHHhccC---CCCEEEEEE-----------C----------
Confidence            389999995 999999999999999999999999999999988531   234555554           3          


Q ss_pred             cCCCCCccccCCCC-ccccccccCCC-CCCCcc-cCCeEEEeccc--ccccccccccCCCCceeeeeecch
Q psy14885        119 TQQSPNLWVNEDGT-NLNELDAAFLP-EPADNV-QRDYLAYSFSQ--SLKRWGFERVTGMEPLLFICEASI  184 (483)
Q Consensus       119 ~~~~~~~~~W~dg~-~~~~~~~~w~~-~P~~~~-~~~Cv~~~~~~--~~~~W~~~~C~~~~~~~fvCe~~~  184 (483)
                         .++.|.|+||+ ++.....+|.+ +|++.. .++||.+....  ..+.|+|.+|+  ..++||||+++
T Consensus        56 ---~~~~~~W~dg~~~~~~~y~~W~~geP~~~~~~~~Cv~~~~~~~~~~~~W~d~~C~--~~~~fICe~~~  121 (157)
T 1g1t_A           56 ---VNNVWVWVGTQKPLTEEAKNWAPGEPNNRQKDEDCVEIYIKREKDVGMWNDERCS--KKKLALCYTAA  121 (157)
T ss_dssp             ---ETTEEEETTTCCBCCTTTCCBCTTCCCCCSTTCCEEEECTTCSSSTTCEEEECTT--SCBEEEEEECC
T ss_pred             ---CCCeeEEeCCCccCCcccCCCCCCcCCCCCCCCCceEEeCcCCCCCCccccCCCC--CCcceEeCcCC
Confidence               24689999998 44311288999 998754 68999997532  12469999999  99999999985

>2ehg_A Ribonuclease HI; RNAse HI, hyperthermophilic archaeon, D stranded RNA-dependent RNAse, hydrolase; 1.60A {Sulfolobus tokodaii} PDB: 3aly_A

Probab=99.76  E-value=1.8e-18  Score=151.82  Aligned_cols=119  Identities=15%  Similarity=0.198  Sum_probs=92.6

Q ss_pred             eEe-eCCCC---CCCceE-EEEEeCCCEEE-----eCC---CCCcchHHHHHHHHHHHHHhHhcCCceEEEEeccHHHHH
Q psy14885        222 VVF-DLSKR---NSNTGF-AFIINNENFQY-----RLP---HEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLN  288 (483)
Q Consensus       222 ~~~-DgS~~---~~~~G~-g~~~~~~~~~~-----~l~---~~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs~~~~~  288 (483)
                      .+| |||+.   +|++|+ |+++.+.+...     .+.   ..+||++||+.|++.||+.+.+.+.+++.|+|||+++++
T Consensus         3 ~iy~DGs~~~~n~g~~G~~G~vi~~~g~~~~~~~~~~~~~~~~~tnn~aEl~A~~~aL~~a~~~g~~~v~i~tDS~~vi~   82 (149)
T 2ehg_A            3 IGYFDGLCEPKNPGGIATFGFVIYLDNRKIEGYGLAEKPFSINSTNNVAEYSGLICLMETMLRLGISSPIIKGDSQLVIK   82 (149)
T ss_dssp             EEEEEEEEESSSSSSEEEEEEEEECSSCEEEEEEECSCTTCTTCCHHHHHHHHHHHHHHHHHHHTCCSCEEEESCHHHHH
T ss_pred             EEEEeeccCCCCCChheEEEEEEEECCEEEEEeccccCCCCCCccHHHHHHHHHHHHHHHHHHcCCCEEEEEeChHHHHH
Confidence            455 99987   288896 99987644321     122   378999999999999999999888889999999999999


Q ss_pred             hhcccCCc-chHHHHHHHHHHHHhhCCCceEEEEeccCCCCcchHHHhHHHHhhhcCC
Q psy14885        289 GIDNIQQR-NNIIQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAKNSINSK  345 (483)
Q Consensus       289 ~l~~~~~~-~~~~~~i~~~~~~~~~~~~~v~~~WvpgH~g~~gNe~AD~lAk~a~~~~  345 (483)
                      .+++.+.. +.....+.+.+..+..+. .|+|.|||+|    +|+.||+|||+|+...
T Consensus        83 ~i~~~w~~~~~~~~~l~~~i~~l~~~~-~v~~~~V~~~----~N~~AD~LA~~a~~~~  135 (149)
T 2ehg_A           83 QMNGEYKVKAKRIIPLYEKAIELKKKL-NATLIWVPRE----ENKEADRLSRVAYELV  135 (149)
T ss_dssp             HHTTSSCCCCTTHHHHHHHHHHHHHHH-TCEEEECCGG----GCHHHHHHHHHHHHHH
T ss_pred             HHhCccccCCHHHHHHHHHHHHHHhcC-CEEEEEcCCc----ccHHHHHHHHHHHHhh
Confidence            99987552 333445555555554444 5999999985    9999999999998653

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=99.75  E-value=1.4e-18  Score=154.69  Aligned_cols=116  Identities=14%  Similarity=0.280  Sum_probs=92.5

Q ss_pred             eEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccCcccccccccCC
Q psy14885         39 SCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGG  118 (483)
Q Consensus        39 ~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~~~~~~~w~~~g  118 (483)
                      .||+++... ++|.+|+..|+.+||+||+|++++|++||..++...   ...||||++           +          
T Consensus         1 w~Y~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~---~~~~WIGl~-----------~----------   55 (162)
T 1g1s_A            1 WTYHYSTKA-YSWNISRKYCQNRYTDLVAIQNKNEIDYLNKVLPYY---SSYYWIGIR-----------K----------   55 (162)
T ss_dssp             CEEEEEEEE-ECHHHHHHHHHHHSSEECCCCCHHHHHHHHHHSCCC---TTCEEEEEE-----------E----------
T ss_pred             CeEEEecCC-cCHHHHHHHHHhcCCEEeeeCCHHHHHHHHHHhccC---CCCEEEeEE-----------C----------
Confidence            489999995 999999999999999999999999999999988532   234555554           3          


Q ss_pred             cCCCCCccccCCCC-ccccccccCCC-CCCCcc-cCCeEEEeccc--ccccccccccCCCCceeeeeecch
Q psy14885        119 TQQSPNLWVNEDGT-NLNELDAAFLP-EPADNV-QRDYLAYSFSQ--SLKRWGFERVTGMEPLLFICEASI  184 (483)
Q Consensus       119 ~~~~~~~~~W~dg~-~~~~~~~~w~~-~P~~~~-~~~Cv~~~~~~--~~~~W~~~~C~~~~~~~fvCe~~~  184 (483)
                         .++.|.|+||+ ++.....+|.+ +|++.. .++||.+....  ..+.|++.+|+  ..++||||+++
T Consensus        56 ---~~~~~~W~dg~~~~~~~~~~W~~geP~~~~~~~~Cv~~~~~~~~~~~~W~d~~C~--~~~~fICe~~~  121 (162)
T 1g1s_A           56 ---NNKTWTWVGTKKALTNEAENWADNEPNNKRNNEDCVEIYIKSPSAPGKWNDEHCL--KKKHALCYTAS  121 (162)
T ss_dssp             ---ETTEEEETTTCCBCCTTTCCBCTTCCCCTTSCCCEEEECTTCSSSTTCEEEECTT--SCEEEEEEECC
T ss_pred             ---CCCCeEECCCCccCCcccCccCCCCCCCCCCCcceEEEeccCCCCCCeEECCCCC--CCCCEEEEeCC
Confidence               24789999996 55411288999 998754 68999997532  22469999999  99999999974

>1mu2_A HIV-2 RT; HIV-2 reverse transcriptase, AIDS, polymerase, drug design, transferase; 2.35A {Human immunodeficiency virus 2} SCOP: c.55.3.1 e.8.1.2 PDB: 1mu2_B

Probab=99.73  E-value=5.1e-18  Score=180.21  Aligned_cols=114  Identities=18%  Similarity=0.260  Sum_probs=89.4

Q ss_pred             ceEe-eCCCCC--CCceEEEEEeCCCEEEeCCCCCcchHHHHHHHHHHHHHhHhcCCceEEEEeccHHHHHhhcccCC--
Q psy14885        221 DVVF-DLSKRN--SNTGFAFIINNENFQYRLPHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGIDNIQQ--  295 (483)
Q Consensus       221 ~~~~-DgS~~~--~~~G~g~~~~~~~~~~~l~~~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs~~~~~~l~~~~~--  295 (483)
                      .++| |||+.+  |..|+|+++..+.........+||++||+.|++.||+.    ...++.|+|||++|+++|++...  
T Consensus       437 ~~iytDGs~~~n~g~~g~G~v~~~~~~~~~~~~~~TNn~aEl~A~i~aL~~----~~~~v~I~tDS~~v~~~i~~~~~~~  512 (555)
T 1mu2_A          437 ETFYTDGSCNRQSKEGKAGYVTDRGKDKVKKLEQTTNQQAELEAFAMALTD----SGPKVNIIVDSQYVMGIVASQPTES  512 (555)
T ss_dssp             EEEEEEEEECTTTCCEEEEEEETTSCEEEEEESSCCHHHHHHHHHHHHHHT----SCSEEEEEESCHHHHHHHHTCCSEE
T ss_pred             eEEEEcccccCCCCCceEEEEEEeCCEeeccCCCCCHHHHHHHHHHHHHHc----CCCeEEEEEehHHHHHHHhcccccc
Confidence            4566 999875  66899999976544322235789999999999999997    56899999999999999997432  


Q ss_pred             cchHHHHHHHHHHHHhhCCCceEEEEeccCCCCcchHHHhHHHHhhh
Q psy14885        296 RNNIIQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAKNSI  342 (483)
Q Consensus       296 ~~~~~~~i~~~~~~~~~~~~~v~~~WvpgH~g~~gNe~AD~lAk~a~  342 (483)
                      ..++...+.+    +...+..|.|.|||||+|++|||.||+|||+|+
T Consensus       513 ~~~l~~~~~~----~~~~~~~v~~~wV~~H~g~~~Ne~AD~LA~~a~  555 (555)
T 1mu2_A          513 ESKIVNQIIE----EMIKKEAIYVAWVPAHKGIGGNQEVDHLVSQGI  555 (555)
T ss_dssp             SCHHHHHHHH----HHHHCSEEEEEECCSSSCCTTHHHHHHHHHTTC
T ss_pred             cHHHHHHHHH----HhccCCcEEEEEEECCCCChhHHHHHHHHHhhC
Confidence            3344443333    223467899999999999999999999999885

>2zd1_A Reverse transcriptase/ribonuclease H; P51/P66, hetero dimer, NNRTI, nonnucleoside inhibitor, AIDS, HIV, rilpivirine, diarylpyrimidine, DAPY, DNA recombination; HET: T27; 1.80A {Human immunodeficiency virus 1} PDB: 3is9_A* 3irx_A* 2ze2_A* 3bgr_A* 3qlh_A* 3klf_A* 3qo9_A* 1dlo_A 1bqm_A 2be2_A* 1s6q_A* 1s6p_A* 1s9g_A* 1suq_A* 2b5j_A* 2b6a_A* 2ban_A* 1s9e_A* 1hni_A* 1hnv_A* ...

Probab=99.73  E-value=3.8e-18  Score=181.22  Aligned_cols=114  Identities=15%  Similarity=0.258  Sum_probs=87.3

Q ss_pred             cceEe-eCCCCC--CCceEEEEEeCCCEEEeCCCCCcchHHHHHHHHHHHHHhHhcCCceEEEEeccHHHHHhhcccCCc
Q psy14885        220 TDVVF-DLSKRN--SNTGFAFIINNENFQYRLPHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGIDNIQQR  296 (483)
Q Consensus       220 ~~~~~-DgS~~~--~~~G~g~~~~~~~~~~~l~~~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs~~~~~~l~~~~~~  296 (483)
                      ..++| |||+.+  |..|+|+++..+.........+||++||+.|++.||+.+    ..++.|+||||+|+++|++....
T Consensus       439 ~~~iytDGs~~~n~g~~g~g~v~~~~~~~~~~~~~~TNn~aEl~Ai~~aL~~~----~~~v~I~tDS~~vi~~i~~~~~~  514 (557)
T 2zd1_A          439 AETFYVDGAANRETKLGKAGYVTNKGRQKVVPLTNTTNQKTELQAIYLALQDS----GLEVNIVTDSQYALGIIQAQPDK  514 (557)
T ss_dssp             SCEEEEEEEECTTTCCEEEEEEETTSCEEEEEECSCCHHHHHHHHHHHHHHHS----CSEEEEEECCHHHHHHHTTCCSE
T ss_pred             CEEEEEccCCCCCCCceEEEEEEECCcEEEecCCCCCHHHHHHHHHHHHHHhC----CCcEEEEeChHHHHHHHhcCCcc
Confidence            35666 999864  678999998765433222357899999999999999998    57999999999999999985443


Q ss_pred             --chHHHHHHHHHHHHhhCCCceEEEEeccCCCCcchHHHhHHHHhh
Q psy14885        297 --NNIIQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAKNS  341 (483)
Q Consensus       297 --~~~~~~i~~~~~~~~~~~~~v~~~WvpgH~g~~gNe~AD~lAk~a  341 (483)
                        .++...+.+   .+.. ...|+|.|||||+|++|||.||+||++|
T Consensus       515 ~~~~l~~~~~~---~l~~-~~~v~~~wV~~H~g~~~Ne~AD~LA~~a  557 (557)
T 2zd1_A          515 SESELVNQIIE---QLIK-KEKVYLAWVPAHKGIGGNEQVDKLVSAG  557 (557)
T ss_dssp             ESSHHHHHHHH---HHHH-CSEEEEEECCSSSCCTTCCGGGGCC---
T ss_pred             CCHHHHHHHHH---HHhc-CCCEEEEEcCCCCCChhHHHHHHHHhcC
Confidence              344444333   2333 4689999999999999999999999986

>1zbf_A Ribonuclease H-related protein; RNAse H, RNA/DNA hybrid, DDE motif, hydrolase; 1.50A {Bacillus halodurans} SCOP: c.55.3.1 PDB: 1zbi_A 2g8u_A 2g8i_A 2g8h_A 2g8k_A 2g8f_A 2g8v_A 2g8w_A 3ey1_A* 1zbl_A 3d0p_A* 3i8d_A* 2r7y_A*

Probab=99.37  E-value=3.1e-13  Score=116.39  Aligned_cols=112  Identities=11%  Similarity=0.059  Sum_probs=84.3

Q ss_pred             eEe-eCCCCC--CCceEEEEEeCCCEEEeC---CCCCcchHHHHHHHHHHHHHhHhcCCceEEEEeccHHHHHhhcccCC
Q psy14885        222 VVF-DLSKRN--SNTGFAFIINNENFQYRL---PHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGIDNIQQ  295 (483)
Q Consensus       222 ~~~-DgS~~~--~~~G~g~~~~~~~~~~~l---~~~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs~~~~~~l~~~~~  295 (483)
                      .+| |||+.+  |++|+|+++...+.....   ...+||++||++|++.||+.+.+... ++.|+|||++|++.+.+.+.
T Consensus        13 ~iy~DGa~~gNpG~~G~G~vl~~~g~~~~~~~~~~~~TNN~aEl~A~i~aL~~~~~~~~-~v~i~tDS~~vi~w~~~~~~   91 (142)
T 1zbf_A           13 SLSVDVGSQGNPGIVEYKGVDTKTGEVLFEREPIPIGTNNMGEFLAIVHGLRYLKERNS-RKPIYSNSQTAIKWVKDKKA   91 (142)
T ss_dssp             SEEEEEEECSSSEEEEEEEEETTTCCEEEECCCEEEECHHHHHHHHHHHHHHHHHHTTC-CCCEEESCHHHHHHHHHTCC
T ss_pred             EEEEeeccCCCCCCeEEEEEEEeCCEEEEEecccCCcCcHHHHHHHHHHHHHHHHhCCC-eEEEEEehHHHHHHHHcCCc
Confidence            355 999865  888999999754433222   13679999999999999999987766 99999999999999988652


Q ss_pred             ---------cchHHHHHHHHHHHHhhCCCceEEEEeccCCCCcchHHHhH
Q psy14885        296 ---------RNNIIQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQ  336 (483)
Q Consensus       296 ---------~~~~~~~i~~~~~~~~~~~~~v~~~WvpgH~g~~gNe~AD~  336 (483)
                               ..++.+.+.++...+..  ..++...|+-|++.-||..||.
T Consensus        92 k~~~~~~v~n~dLw~~l~~~~~w~~~--~~~~~~~~kw~~~~~ge~pad~  139 (142)
T 1zbf_A           92 KSTLVRNEETALIWKLVDEAEEWLNT--HTYETPILKWQTDKWGEIKADY  139 (142)
T ss_dssp             CCCCCCSTTTHHHHHHHHHHHHHHHH--CCCCCCEEECCHHHHCSCTTCC
T ss_pred             cCCCCCCcccHHHHHHHHHHHHHHhh--CCCceeEEEeccCccCcCcccc
Confidence                     12445555554444544  4566677889999999999984

>4htu_A Ribonuclease H, RNAse H; 5-chloro-2'-deoxyuridine, W-C base PAIR, wobble base PAIR, D helix; HET: DNA UCL; 1.49A {Bacillus halodurans} PDB: 3d0p_A* 4hue_A* 4huf_A* 4hug_A* 1zbf_A 1zbi_A 2g8u_A 3uld_A* 3ey1_A* 3twh_A* 2g8f_A 2g8v_A 2g8w_A 2g8i_A 2g8h_A 2g8k_A 3i8d_A* 2r7y_A* 1zbl_A

Probab=99.15  E-value=3.7e-11  Score=101.35  Aligned_cols=92  Identities=10%  Similarity=0.117  Sum_probs=64.1

Q ss_pred             eEeeCCCCC--CCceEEEEEeCCCEEEeC---CCCCcchHHHHHHHHHHHHHhHhcCCceEEEEeccHHHHHhhcccC--
Q psy14885        222 VVFDLSKRN--SNTGFAFIINNENFQYRL---PHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGIDNIQ--  294 (483)
Q Consensus       222 ~~~DgS~~~--~~~G~g~~~~~~~~~~~l---~~~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs~~~~~~l~~~~--  294 (483)
                      +++|||+.+  |+.|+|.|+...+.....   .+.+||++||++|++.||+.+.+.+.. +.|+||||+|++.|.+..  
T Consensus         8 iytDGac~GNPGp~G~ggV~~~~g~~~~~~g~~~~tTNN~aEl~A~i~aL~~l~~~~~~-v~i~tDSqyVi~wi~~~~~k   86 (134)
T 4htu_A            8 LSVDVGSQGNPGIVEYKGVDTKTGEVLFEREPIPIGTNNMGEFLAIVHGLRYLKERNSR-KPIYSNSQTAIKWVKDKKAK   86 (134)
T ss_dssp             EEEEEEEETTTEEEEEEEEETTTCCEEEEEEEEEEECHHHHHHHHHHHHHHHHHHTTCC-CCEEESCHHHHHHHHHTCCC
T ss_pred             EEEeeccCCCCCCeEEEEEEEECCEEEEEecCCCCCchHHHHHHHHHHHHHHHHhCCCC-EEEEcchHHHHHHHHcCCcc
Confidence            344999866  889996666554432211   247899999999999999999875544 899999999999997621  


Q ss_pred             -------CcchHHHHHHHHHHHHhhCC
Q psy14885        295 -------QRNNIIQLIKQEYYFASTNG  314 (483)
Q Consensus       295 -------~~~~~~~~i~~~~~~~~~~~  314 (483)
                             +..++.+.+.++...+....
T Consensus        87 t~~~~~vkN~dLw~~ld~~~~~l~~~~  113 (134)
T 4htu_A           87 STLVRNEETALIWKLVDEAEEWLNTHT  113 (134)
T ss_dssp             CCCCCSSTTHHHHHHHHHHHHHHHHCC
T ss_pred             cCCCCCccCHHHHHHHHHHHHHHHhCC
Confidence                   12355555555555555433

>3k7b_A Protein A33; C-type lectin-like domain, homodimer, poxvirus, EEV, EV, VIR protein; 2.10A {Vaccinia virus WR}

Probab=98.37  E-value=5.8e-08  Score=75.85  Aligned_cols=46  Identities=26%  Similarity=0.422  Sum_probs=43.2

Q ss_pred             cccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHh
Q psy14885         34 VQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQL   81 (483)
Q Consensus        34 ~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~   81 (483)
                      +.|++.||+|+..+ ++|++|+..|.+.|++|+++++..+ .+|..++
T Consensus        14 i~f~~~CY~f~~~p-kTW~eA~~~C~~~G~~Lpsi~s~~~-~wL~~YL   59 (96)
T 3k7b_A           14 LYYQGSCYILHSDY-QMFSDAAANCTAESSTLPNKSDVMI-TWLIDYV   59 (96)
T ss_dssp             EEETTEEEEEEEEE-ECHHHHHHHHHHTTCBCCCHHHHTT-STTHHHH
T ss_pred             eeeCCeeEEEeCCC-CCHHHHHHHHHHcCCccCCcccchh-HHHHHHH
Confidence            56789999999997 9999999999999999999999988 9999888

>3fd4_A Glycoprotein GP42; C type lectin, virus entry, membrane fusion, HOST-virus interaction, lectin, membrane, transmembrane, viral protein; 2.40A {Human herpesvirus 4} PDB: 1kg0_C

Probab=94.65  E-value=0.1  Score=44.27  Aligned_cols=117  Identities=15%  Similarity=0.194  Sum_probs=77.4

Q ss_pred             cCCCccc--ccccCCeEEEEecCCCCCHHHHHHHhhhcC--CcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCC
Q psy14885         26 ELRCPQH--WVQYRDSCYRFVKSPLKTRNDAKLNCKSLD--SDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPN  101 (483)
Q Consensus        26 ~~~C~~g--w~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g--~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~  101 (483)
                      +..|+..  -+.+.+.||+|... ..+|+..-..|++..  -.|-+... ...-+++..++    .++.+|+|.-+...+
T Consensus        67 C~~C~~r~~tFs~~~~CyYftp~-kytf~~CF~aCa~ls~C~yfY~Pq~-~~~PiV~~NLk----~~eslWVGifK~~~~  140 (191)
T 3fd4_A           67 CTYCNTREYTFSYKGCCFYFTKK-KHTWNGCFQACAELYPCTYFYGPTP-DILPVVTRNLN----AIESLWVGVYRVGEG  140 (191)
T ss_dssp             SCCCCTTTCSEEETTEEEEECSS-CBCTTHHHHHHHHHSTTEEECCCCT-TTHHHHHTTSC----TTCEEEECCEECTTC
T ss_pred             CeecCcceeEEEecceEEEeCcc-cccHHHHHHHHHhhcCeeEEecCCc-cCChhhhcccC----CcCcEEEEEEEcCcc
Confidence            5667654  25678899999999 599999999999863  33444432 24556666554    456777777765545


Q ss_pred             cccccCcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeee
Q psy14885        102 LWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICE  181 (483)
Q Consensus       102 ~Wig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe  181 (483)
                      .|..+                       |+...    .-|.     .-+..|..+...+.. .|.-..|+  ..++.+|.
T Consensus       141 ~W~sL-----------------------Dn~n~----~V~D-----i~gSyCaYvt~~S~~-P~s~~eC~--~~K~CLC~  185 (191)
T 3fd4_A          141 NWTSL-----------------------DGGTF----KVYQ-----IFGSHCTYVSKFSTV-PVSHHECS--FLKPCLCV  185 (191)
T ss_dssp             CEEET-----------------------TEEEE----CCBC-----SSSSSCEEEESSCSS-CEECSCTT--SCBCBEEE
T ss_pred             ceEEc-----------------------cCCce----EEEE-----eccCeeeEEeccccc-ccceeecc--ccceeEEe
Confidence            55554                       44411    1121     114799999766543 48888999  99999997


Q ss_pred             cc
Q psy14885        182 AS  183 (483)
Q Consensus       182 ~~  183 (483)
                      -.
T Consensus       186 s~  187 (191)
T 3fd4_A          186 SQ  187 (191)
T ss_dssp             EE
T ss_pred             ee
Confidence            54

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	483
d1xpha1	130	d.169.1.1 (A:265-394) DC-SIGNR (DC-SIGN related re	1e-09
d1e87a_	117	d.169.1.1 (A:) CD69 {Human (Homo sapiens) [TaxId:	1e-09
d1ypqa1	131	d.169.1.1 (A:140-270) Oxidised low density lipopro	2e-09
d1qo3c_	133	d.169.1.1 (C:) NK cell receptor {Mouse (Mus muscul	7e-09
d3c8ja1	122	d.169.1.1 (A:138-259) NK cell receptor {Mouse (Mus	1e-08
d1uv0a_	140	d.169.1.1 (A:) Pancreatitis-associated protein 1 {	2e-08
d1tdqb_	126	d.169.1.1 (B:) Aggrecan core protein {Rat (Rattus	8e-08
d1hq8a_	123	d.169.1.1 (A:) NK cell-activating receptor nkg2d {	8e-08
d1t8da1	143	d.169.1.1 (A:1-143) Low affinity immunoglobulin ep	6e-07
d1dv8a_	128	d.169.1.1 (A:) H1 subunit of the asialoglycoprotei	7e-07
d1mu2a1	126	c.55.3.1 (A:430-555) HIV RNase H (Domain of revers	2e-06
d1kg0c_	136	d.169.1.1 (C:) EBV gp42 {Epstein-Barr virus [TaxId	3e-06
d3bdwa1	121	d.169.1.1 (A:59-179) CD94 {Human (Homo sapiens) [T	5e-06
d1gz2a_	139	d.169.1.1 (A:) Ovocleidin-17 {Chicken (Gallus gall	6e-06
d1egga_	136	d.169.1.1 (A:) Macrophage mannose receptor, CRD4 {	9e-06
d1jzna_	135	d.169.1.1 (A:) Galactose-specific C-type lectin {W	1e-05
d1c3ab_	125	d.169.1.1 (B:) Snake coagglutinin beta chain {Habu	1e-05
d1wmza_	140	d.169.1.1 (A:) Lectin CEL-I {Cucumaria echinata [T	2e-05
d1rila_	147	c.55.3.1 (A:) RNase H (RNase HI) {Thermus thermoph	2e-05
d1jwia_	124	d.169.1.1 (A:) Snake coagglutinin alpha chain {Puf	2e-05
d1oz7a_	131	d.169.1.1 (A:) Snake coagglutinin alpha chain {Saw	3e-05
d1umrc_	125	d.169.1.1 (C:) Snake coagglutinin beta chain {Sout	3e-05
d1sb2b1	127	d.169.1.1 (B:2-128) Snake coagglutinin beta chain	3e-05
d1jwib_	123	d.169.1.1 (B:) Snake coagglutinin beta chain {Puff	5e-05
d2afpa_	129	d.169.1.1 (A:) Type II antifreeze protein {Sea rav	5e-05
d1oz7b_	123	d.169.1.1 (B:) Snake coagglutinin beta chain {Saw-	6e-05
d1g1ta1	118	d.169.1.1 (A:1-118) E-selectin, C-lectin domain {H	7e-05
d1jl1a_	152	c.55.3.1 (A:) RNase H (RNase HI) {Escherichia coli	1e-04
d1v7pa_	134	d.169.1.1 (A:) Snake coagglutinin alpha chain {Sna	1e-04
d1qdda_	144	d.169.1.1 (A:) Lithostathine, inhibitor of stone f	1e-04
d1v7pb_	127	d.169.1.1 (B:) Snake coagglutinin beta chain {Snak	2e-04
d1j34b_	123	d.169.1.1 (B:) Snake coagglutinin beta chain {Habu	3e-04
d1pwba1	121	d.169.1.1 (A:235-355) Surfactant protein, lectin d	3e-04
d1wk1a_	150	d.169.1.1 (A:) Hypothetical protein F28B4.3 {Caeno	4e-04
d1umra_	135	d.169.1.1 (A:) Snake coagglutinin alpha chain {Sou	5e-04
d1fvua_	133	d.169.1.1 (A:) Snake coagglutinin alpha chain {Jar	7e-04
d1j34a_	129	d.169.1.1 (A:) Snake coagglutinin alpha chain {Hab	0.001
d1g1sa1	118	d.169.1.1 (A:1-118) P-selectin, C-lectin domain {H	0.001
d1sb2a1	132	d.169.1.1 (A:1-132) Snake coagglutinin alpha chain	0.002
d1s1ta1	110	c.55.3.1 (A:430-539) HIV RNase H (Domain of revers	0.002
d1c3aa_	135	d.169.1.1 (A:) Snake coagglutinin alpha chain {Hab	0.003
d1tn3a_	137	d.169.1.1 (A:) Tetranectin {Human (Homo sapiens) [	0.004
d1r13a1	119	d.169.1.1 (A:110-228) Surfactant protein, lectin d	0.004

>d1xpha1 d.169.1.1 (A:265-394) DC-SIGNR (DC-SIGN related receptor) {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: DC-SIGNR (DC-SIGN related receptor)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.3 bits (129), Expect = 1e-09
 Identities = 21/103 (20%), Positives = 40/103 (38%), Gaps = 2/103 (1%)

Query: 28  RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQ 87
            CP+ W  ++ +CY    S  +  +D+   C+ + + L  +  A+E  F+  Q    +  
Sbjct: 3   HCPKDWTFFQGNCYFMSNSQ-RNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRF 61

Query: 88  RRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNED 130
                    Q+    WV+          +  + + PN   NED
Sbjct: 62  SWMGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGE-PNNSGNED 103

>d1e87a_ d.169.1.1 (A:) CD69 {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: CD69
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.7 bits (128), Expect = 1e-09
 Identities = 14/90 (15%), Positives = 33/90 (36%), Gaps = 6/90 (6%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
           C + WV Y+  CY       ++   A+  C    + LA ++   +  F+      ++   
Sbjct: 3   CSEDWVGYQRKCYFISTVK-RSWTSAQNACSEHGATLAVIDSEKDMNFLKRYAGREE--- 58

Query: 89  RKWYFGGTQQSPNLWVNEDDPQRRKWYFGG 118
              + G  ++  + W   +  +   W+   
Sbjct: 59  --HWVGLKKEPGHPWKWSNGKEFNNWFNVT 86

>d1ypqa1 d.169.1.1 (A:140-270) Oxidised low density lipoprotein {Human (Homo sapiens) [TaxId: 9606]} Length = 131

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Oxidised low density lipoprotein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.4 bits (127), Expect = 2e-09
 Identities = 19/102 (18%), Positives = 34/102 (33%), Gaps = 3/102 (2%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
           CPQ W+ + ++CY F          ++  C SLD+ L  +N   +  FI   + +     
Sbjct: 5   CPQDWIWHGENCYLFSSGS-FNWEKSQEKCLSLDAKLLKINSTADLDFIQQAISYSSFPF 63

Query: 89  RKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNED 130
                      P LW +        +   G       + +  
Sbjct: 64  WMGLSRRNPSYPWLWEDGSPLMPHLFRVRG--AVSQTYPSGT 103

>d1qo3c_ d.169.1.1 (C:) NK cell receptor {Mouse (Mus musculus), ly49-a [TaxId: 10090]} Length = 133

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: NK cell receptor
species: Mouse (Mus musculus), ly49-a [TaxId: 10090]

 Score = 51.8 bits (123), Expect = 7e-09
 Identities = 19/96 (19%), Positives = 29/96 (30%), Gaps = 5/96 (5%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
              +W  Y   CY FV    KT +  K  C+S    L  ++D DE  F+   +       
Sbjct: 14  DKVYWFCYGMKCYYFVMDR-KTWSGCKQTCQSSSLSLLKIDDEDELKFLQLVVPSDSC-- 70

Query: 89  RKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPN 124
             W           W   D+   +           +
Sbjct: 71  --WVGLSYDNKKKDWAWIDNRPSKLALNTRKYNIRD 104

>d3c8ja1 d.169.1.1 (A:138-259) NK cell receptor {Mouse (Mus musculus), ly49-c [TaxId: 10090]} Length = 122

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: NK cell receptor
species: Mouse (Mus musculus), ly49-c [TaxId: 10090]

 Score = 51.0 bits (121), Expect = 1e-08
 Identities = 17/97 (17%), Positives = 32/97 (32%), Gaps = 5/97 (5%)

Query: 28  RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQ 87
           R  ++W  Y   CY F+ +   T +  K NC+     +  + D DE  F+   +   +  
Sbjct: 1   RGVKYWFCYSTKCYYFIMNK-TTWSGCKANCQHYGVPILKIEDEDELKFLQRHVIPGNY- 58

Query: 88  RRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPN 124
              W      +    W   D+   +           +
Sbjct: 59  ---WIGLSYDKKKKEWAWIDNGPSKLDMKIKKMNFKS 92

>d1uv0a_ d.169.1.1 (A:) Pancreatitis-associated protein 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 140

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Pancreatitis-associated protein 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.9 bits (120), Expect = 2e-08
 Identities = 21/157 (13%), Positives = 40/157 (25%), Gaps = 20/157 (12%)

Query: 27  LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDP 86
           +RCP+    Y   CY    SP    +      K    +L +V    E  F+   +     
Sbjct: 3   IRCPKGSKAYGSHCYALFLSPKSWTDADLACQKRPSGNLVSVLSGAEGSFVSSLVKSIGN 62

Query: 87  QRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPA 146
                + G      +     +       +      +   W                    
Sbjct: 63  SYSYVWIGLH----DPTQGTEPNGEGWEWSSSDVMNYFAWERN--------------PST 104

Query: 147 DNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 183
            +      + S S +  RW          L ++C+ +
Sbjct: 105 ISSPGHCASLSRSTAFLRWKDYNCN--VRLPYVCKFT 139

>d1tdqb_ d.169.1.1 (B:) Aggrecan core protein {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 126

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Aggrecan core protein
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 48.9 bits (115), Expect = 8e-08
 Identities = 21/153 (13%), Positives = 38/153 (24%), Gaps = 31/153 (20%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
           C + W +++  CYR      +T  DA+  C+   S L+++   +E  F+           
Sbjct: 3   CEEGWTKFQGHCYRHFPDR-ETWVDAERRCREQQSHLSSIVTPEEQEFVNKNAQDYQ--- 58

Query: 89  RKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADN 148
                                    W     +     +   DG +L              
Sbjct: 59  -------------------------WIGLNDRTIEGDFRWSDGHSLQFEKWRPNQPDNFF 93

Query: 149 VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICE 181
              +            W          L F C+
Sbjct: 94  ATGEDCVVMIWHERGEWNDVPCN--YQLPFTCK 124

>d1hq8a_ d.169.1.1 (A:) NK cell-activating receptor nkg2d {Mouse (Mus musculus) [TaxId: 10090]} Length = 123

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: NK cell-activating receptor nkg2d
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.8 bits (115), Expect = 8e-08
 Identities = 17/103 (16%), Positives = 34/103 (33%), Gaps = 5/103 (4%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
           CP +W+ +R++CY+F     KT N ++ +C S +S L  +   +E  F+     +     
Sbjct: 6   CPNNWICHRNNCYQFFNEE-KTWNQSQASCLSQNSSLLKIYSKEEQDFLKLVKSYH---- 60

Query: 89  RKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNEDG 131
                         W +       +       +          
Sbjct: 61  WMGLVQIPANGSWQWEDGSSLSYNQLTLVEIPKGSCAVYGSSF 103

>d1t8da1 d.169.1.1 (A:1-143) Low affinity immunoglobulin epsilon Fc receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 143

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Low affinity immunoglobulin epsilon Fc receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.5 bits (109), Expect = 6e-07
 Identities = 18/102 (17%), Positives = 35/102 (34%), Gaps = 6/102 (5%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
           CP+ W+ ++  CY F K   K    A+  C  ++  L +++  +E  F+           
Sbjct: 8   CPEKWINFQRKCYYFGKGT-KQWVHARYACDDMEGQLVSIHSPEEQDFLTKHASHTGSWI 66

Query: 89  RKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNED 130
                    +   +WV   D     +      +  +    ED
Sbjct: 67  --GLRNLDLKGEFIWV---DGSHVDYSNWAPGEPTSRSQGED 103

>d1dv8a_ d.169.1.1 (A:) H1 subunit of the asialoglycoprotein receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 128

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: H1 subunit of the asialoglycoprotein receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.3 bits (108), Expect = 7e-07
 Identities = 23/107 (21%), Positives = 39/107 (36%), Gaps = 1/107 (0%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
           CP +WV++  SCY F +S  K   DA   C+  D+ L  V   +E  F+ + +   +   
Sbjct: 1   CPVNWVEHERSCYWFSRSG-KAWADADNYCRLEDAHLVVVTSWEEQKFVQHHIGPVNTWM 59

Query: 89  RKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLN 135
                 G  +  +    E   +  +           L   ED  +  
Sbjct: 60  GLHDQNGPWKWVDGTDYETGFKNWRPEQPDDWYGHGLGGGEDCAHFT 106

>d1mu2a1 c.55.3.1 (A:430-555) HIV RNase H (Domain of reverse transcriptase) {Human immunodeficiency virus type 2 [TaxId: 11709]} Length = 126

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Ribonuclease H-like
family: Ribonuclease H
domain: HIV RNase H (Domain of reverse transcriptase)
species: Human immunodeficiency virus type 2 [TaxId: 11709]

 Score = 44.5 bits (104), Expect = 2e-06
 Identities = 21/117 (17%), Positives = 37/117 (31%), Gaps = 7/117 (5%)

Query: 227 SKRNSNTGFA-FIINNENFQYRLPHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKS 285
             R S  G A ++ +    + +   + +   AE  A    +            I  D++ 
Sbjct: 16  CNRQSKEGKAGYVTDRGKDKVKKLEQTTNQQAELEAFAMALTDSGPKVN----IIVDSQY 71

Query: 286 VLNGIDNIQQRNNIIQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAKNSI 342
           V+  +    Q       I  +          I   W+P+H  I  N + D L    I
Sbjct: 72  VMGIVA--SQPTESESKIVNQIIEEMIKKEAIYVAWVPAHKGIGGNQEVDHLVSQGI 126

>d1kg0c_ d.169.1.1 (C:) EBV gp42 {Epstein-Barr virus [TaxId: 10376]} Length = 136

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: EBV gp42
species: Epstein-Barr virus [TaxId: 10376]

 Score = 44.4 bits (104), Expect = 3e-06
 Identities = 13/95 (13%), Positives = 26/95 (27%), Gaps = 6/95 (6%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSD-LANVNDADEHGFIMYQLFWQDPQ 87
             ++   Y+  C+ F K    T N     C              D    +   L   +  
Sbjct: 19  TREYTFSYKGCCFYFTKKK-HTWNGCFQACAEKYPCTYFYGPTPDILPVVTRNLNAIES- 76

Query: 88  RRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQS 122
               + G  +     W + D    + +   G+  +
Sbjct: 77  ---LWVGVYRVGEGNWTSLDGGTFKVYQIFGSHCT 108

>d3bdwa1 d.169.1.1 (A:59-179) CD94 {Human (Homo sapiens) [TaxId: 9606]} Length = 121

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: CD94
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.5 bits (101), Expect = 5e-06
 Identities = 19/106 (17%), Positives = 31/106 (29%), Gaps = 5/106 (4%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQ----LFWQ 84
           C + WV YR +CY       KT N+++  C S  S L  + + DE  F+           
Sbjct: 3   CQEKWVGYRCNCYFISSEQ-KTWNESRHLCASQKSSLLQLQNTDELDFMSSSQQFYWIGL 61

Query: 85  DPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNED 130
                   +     S          +                ++E 
Sbjct: 62  SYSEEHTAWLWENGSALSQYLFPSFETFNTKNCIAYNPNGNALDES 107

>d1gz2a_ d.169.1.1 (A:) Ovocleidin-17 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 139

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Ovocleidin-17
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 43.7 bits (101), Expect = 6e-06
 Identities = 22/155 (14%), Positives = 36/155 (23%), Gaps = 18/155 (11%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
           C   WV     C  F      + + A+  C                G   +    +    
Sbjct: 2   CGPGWVPTPGGCLGFFSRE-LSWSRAESFC-------------RRWGPGSHLAAVRSAAE 47

Query: 89  RKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADN 148
            +        S     + +    R W           W   DGT        +       
Sbjct: 48  LRLLAELLNASRGGDGSGEGADGRVWIGLHRPAGSRSWRWSDGTAPRFAS--WHRTAKAR 105

Query: 149 VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 183
                 A    ++   W     T  E   F+C+A+
Sbjct: 106 RGGRCAALRDEEAFTSWAARPCT--ERNAFVCKAA 138

>d1egga_ d.169.1.1 (A:) Macrophage mannose receptor, CRD4 {Human (Homo sapiens) [TaxId: 9606]} Length = 136

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Macrophage mannose receptor, CRD4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (100), Expect = 9e-06
 Identities = 21/107 (19%), Positives = 40/107 (37%), Gaps = 5/107 (4%)

Query: 29  CPQHWV--QYRDSCYRFVKSPL---KTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFW 83
           CP+ W        C++         KT  +++  C++L  DLA++N+ +E   I   +  
Sbjct: 1   CPEDWGASSRTSLCFKLYAKGKHEKKTWFESRDFCRALGGDLASINNKEEQQTIWRLITA 60

Query: 84  QDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNED 130
                + ++ G T  SP+      D     +      +  N    E 
Sbjct: 61  SGSYHKLFWLGLTYGSPSEGFTWSDGSPVSYENWAYGEPNNYQNVEY 107

>d1jzna_ d.169.1.1 (A:) Galactose-specific C-type lectin {Western diamondback rattlesnake (Crotalus atrox) [TaxId: 8730]} Length = 135

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Galactose-specific C-type lectin
species: Western diamondback rattlesnake (Crotalus atrox) [TaxId: 8730]

 Score = 42.9 bits (99), Expect = 1e-05
 Identities = 16/104 (15%), Positives = 29/104 (27%), Gaps = 3/104 (2%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLAN--VNDADEHGFIMYQLFWQDP 86
           CP  W+     CY+      KT  DA++ C+           +   E   I   +     
Sbjct: 3   CPLDWLPMNGLCYKIFNQL-KTWEDAEMFCRKYKPGCHLASFHRYGESLEIAEYISDYHK 61

Query: 87  QRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNED 130
            +   + G   +  +      D     +      Q  +    E 
Sbjct: 62  GQENVWIGLRDKKKDFSWEWTDRSCTDYLTWDKNQPDHYQNKEF 105

>d1c3ab_ d.169.1.1 (B:) Snake coagglutinin beta chain {Habu snake (Trimeresurus flavoviridis), flavocetin-A [TaxId: 88087]} Length = 125

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Snake coagglutinin beta chain
species: Habu snake (Trimeresurus flavoviridis), flavocetin-A [TaxId: 88087]

 Score = 42.4 bits (98), Expect = 1e-05
 Identities = 12/75 (16%), Positives = 20/75 (26%), Gaps = 1/75 (1%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
           CP  W  Y + CY+  +       DA+  C         V+                  +
Sbjct: 4   CPLGWSSYDEHCYQVFQQK-MNWEDAEKFCTQQHKGSHLVSFHSSEEVDFVTSKTFPILK 62

Query: 89  RKWYFGGTQQSPNLW 103
             + + G     N  
Sbjct: 63  YDFVWIGLSNVWNEC 77

>d1wmza_ d.169.1.1 (A:) Lectin CEL-I {Cucumaria echinata [TaxId: 40245]} Length = 140

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Lectin CEL-I
species: Cucumaria echinata [TaxId: 40245]

 Score = 42.2 bits (97), Expect = 2e-05
 Identities = 26/109 (23%), Positives = 37/109 (33%), Gaps = 8/109 (7%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSL-------DSDLANVNDADEHGFIMYQL 81
           CP  W    D CYRF  +   T  +A   C S         SDL +V+ A E  ++    
Sbjct: 3   CPTDWEAEGDHCYRFFNTL-TTWENAHHECVSYSCSTLNVRSDLVSVHSAAEQAYVFNYW 61

Query: 82  FWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNED 130
              D Q  + + G   +         D  +  +      Q  N    ED
Sbjct: 62  RGIDSQAGQLWIGLYDKYNEGDFIWTDGSKVGYTKWAGGQPDNWNNAED 110

>d1rila_ c.55.3.1 (A:) RNase H (RNase HI) {Thermus thermophilus [TaxId: 274]} Length = 147

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Ribonuclease H-like
family: Ribonuclease H
domain: RNase H (RNase HI)
species: Thermus thermophilus [TaxId: 274]

 Score = 42.2 bits (98), Expect = 2e-05
 Identities = 14/125 (11%), Positives = 43/125 (34%), Gaps = 13/125 (10%)

Query: 234 GFAFIINNENFQYRLPHEASIFTAEAIAIFYCIKKISDMKIKKAI-IFSDNKSVLNGIDN 292
           G+A ++     +  L    +  T   + +   I+ +  +K    + +++D+  +      
Sbjct: 20  GWAALLRFHAHEKLLSGGEACTTNNRMELKAAIEGLKALKEPCEVDLYTDSHYLKKAFTE 79

Query: 293 I------------QQRNNIIQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAKN 340
                         +   +      E    +    ++ F ++  H+    N++ D+ A+ 
Sbjct: 80  GWLEGWRKRGWRTAEGKPVKNRDLWEALLLAMAPHRVRFHFVKGHTGHPENERVDREARR 139

Query: 341 SINSK 345
              S+
Sbjct: 140 QAQSQ 144

>d1jwia_ d.169.1.1 (A:) Snake coagglutinin alpha chain {Puff adder (Bitis arietans), bitiscetin [TaxId: 8692]} Length = 124

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Snake coagglutinin alpha chain
species: Puff adder (Bitis arietans), bitiscetin [TaxId: 8692]

 Score = 41.6 bits (96), Expect = 2e-05
 Identities = 17/98 (17%), Positives = 29/98 (29%), Gaps = 7/98 (7%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
           C   W  Y+  CY+  K    T  DA+  C      LA+++  +E  F+         + 
Sbjct: 1   CLPDWSSYKGHCYKVFKKV-GTWEDAEKFCVENSGHLASIDSKEEADFVTKLASQTLTKF 59

Query: 89  RKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLW 126
               +        L       Q    +  G+       
Sbjct: 60  VYDAWI------GLRDESKTQQCSPQWTDGSSVVYENV 91

>d1oz7a_ d.169.1.1 (A:) Snake coagglutinin alpha chain {Saw-scaled viper (Echis carinatus), echicetin [TaxId: 40353]} Length = 131

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Snake coagglutinin alpha chain
species: Saw-scaled viper (Echis carinatus), echicetin [TaxId: 40353]

 Score = 41.6 bits (96), Expect = 3e-05
 Identities = 15/103 (14%), Positives = 29/103 (28%), Gaps = 6/103 (5%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
           CP  W      CY   K P KT ++A+  C     D   ++   +   I+  +   +   
Sbjct: 2   CPPGWSSNGVYCYMLFKEP-KTWDEAEKFCNKQGKDGHLLSIESKKEEILVDIVVSENIG 60

Query: 89  RKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNEDG 131
           + +          L     +      +  G+            
Sbjct: 61  KMYKIWT-----GLSERSKEQHCSSRWSDGSFFRSYEIAIRYS 98

>d1umrc_ d.169.1.1 (C:) Snake coagglutinin beta chain {South american rattlesnake (Crotalus durissus terrificus), convulxin [TaxId: 8732]} Length = 125

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Snake coagglutinin beta chain
species: South american rattlesnake (Crotalus durissus terrificus), convulxin [TaxId: 8732]

 Score = 41.3 bits (95), Expect = 3e-05
 Identities = 17/98 (17%), Positives = 28/98 (28%), Gaps = 9/98 (9%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
           CP HW  Y   CY+  K    T  DA+  C    +    V+                  +
Sbjct: 4   CPSHWSSYDRYCYKVFKQE-MTWADAEKFCTQQHTGSHLVSFHSTEEVDFVVKMTHQSLK 62

Query: 89  RKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLW 126
             +++           N    +    +  GT+     W
Sbjct: 63  STFFWI--------GANNIWNKCNWQWSDGTKPEYKEW 92

>d1sb2b1 d.169.1.1 (B:2-128) Snake coagglutinin beta chain {Malayan pit viper (Calloselasma rhodostoma), rhodocetin [TaxId: 8717]} Length = 127

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Snake coagglutinin beta chain
species: Malayan pit viper (Calloselasma rhodostoma), rhodocetin [TaxId: 8717]

 Score = 41.2 bits (95), Expect = 3e-05
 Identities = 24/113 (21%), Positives = 43/113 (38%), Gaps = 11/113 (9%)

Query: 28  RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCK--SLDSDLANVNDADEHGFIMYQLFWQD 85
           RCP  W   +  CY+  K   KT  +A+  C   + +  L ++  A E  F+   +    
Sbjct: 2   RCPTTWSASKLYCYKPFKEK-KTWIEAERFCAKQAENGHLVSIGSAAEADFLDLVIVVNF 60

Query: 86  PQRRKWYFGG--------TQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNED 130
            ++R   + G        T  +   + N  +P  RK +     +  + W   D
Sbjct: 61  DKQRYRAWTGLTERNLKWTNGASVSYENLYEPYIRKCFVVQPWEGKSKWYKAD 113

>d1jwib_ d.169.1.1 (B:) Snake coagglutinin beta chain {Puff adder (Bitis arietans), bitiscetin [TaxId: 8692]} Length = 123

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Snake coagglutinin beta chain
species: Puff adder (Bitis arietans), bitiscetin [TaxId: 8692]

 Score = 40.8 bits (94), Expect = 5e-05
 Identities = 17/102 (16%), Positives = 29/102 (28%), Gaps = 9/102 (8%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
           C   W  Y+  CY+  K   KT  DA+  CK L +    ++               +  R
Sbjct: 2   CLPDWSSYKGHCYKVFKVE-KTWADAEKFCKELVNGGHLMSVNSREEGEFISKLALEKMR 60

Query: 89  RKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNED 130
               + G      +            +  G +       +E 
Sbjct: 61  IVLVWIGLSHFWRIC--------PLRWTDGARLDYRALSDEP 94

>d2afpa_ d.169.1.1 (A:) Type II antifreeze protein {Sea raven (Hemitripterus americanus) [TaxId: 8094]} Length = 129

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Type II antifreeze protein
species: Sea raven (Hemitripterus americanus) [TaxId: 8094]

 Score = 40.9 bits (94), Expect = 5e-05
 Identities = 16/103 (15%), Positives = 28/103 (27%), Gaps = 8/103 (7%)

Query: 28  RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQ 87
            CP  W    D C  +  +   T   A+ NC  L   LA+++  +EH        +    
Sbjct: 6   NCPAGWQPLGDRCIYYETTA-MTWALAETNCMKLGGHLASIHSQEEH-------SFIQTL 57

Query: 88  RRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNED 130
                + G                   +       P+  +   
Sbjct: 58  NAGVVWIGGSACLQAGAWTWSDGTPMNFRSWCSTKPDDVLAAC 100

>d1oz7b_ d.169.1.1 (B:) Snake coagglutinin beta chain {Saw-scaled viper (Echis carinatus), echicetin [TaxId: 40353]} Length = 123

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Snake coagglutinin beta chain
species: Saw-scaled viper (Echis carinatus), echicetin [TaxId: 40353]

 Score = 40.4 bits (93), Expect = 6e-05
 Identities = 16/101 (15%), Positives = 25/101 (24%), Gaps = 9/101 (8%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
           C   W  Y   CY+  K       DA+  C     D   V+  +               +
Sbjct: 2   CLPDWSVYEGYCYKVFKER-MNWADAEKFCTKQHKDGHLVSFRNSKEVDFVISLAFPMLK 60

Query: 89  RKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNE 129
               +          + +        +  G Q     W NE
Sbjct: 61  NDLVWI--------GLTDYWRDCNWEWSDGAQLDYKAWDNE 93

>d1g1ta1 d.169.1.1 (A:1-118) E-selectin, C-lectin domain {Human (Homo sapiens) [TaxId: 9606]} Length = 118

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: E-selectin, C-lectin domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (92), Expect = 7e-05
 Identities = 13/91 (14%), Positives = 26/91 (28%), Gaps = 3/91 (3%)

Query: 40  CYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQS 99
            Y        T ++A   C+   + L  + + +E  +              W       +
Sbjct: 2   SYNTSTEA-MTYDEASAYCQQRYTHLVAIQNKEEIEY--LNSILSYSPSYYWIGIRKVNN 58

Query: 100 PNLWVNEDDPQRRKWYFGGTQQSPNLWVNED 130
             +WV    P   +       +  N   +ED
Sbjct: 59  VWVWVGTQKPLTEEAKNWAPGEPNNRQKDED 89

>d1jl1a_ c.55.3.1 (A:) RNase H (RNase HI) {Escherichia coli [TaxId: 562]} Length = 152

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Ribonuclease H-like
family: Ribonuclease H
domain: RNase H (RNase HI)
species: Escherichia coli [TaxId: 562]

 Score = 40.4 bits (93), Expect = 1e-04
 Identities = 13/102 (12%), Positives = 37/102 (36%), Gaps = 3/102 (2%)

Query: 250 HEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGIDNIQQRNN---IIQLIKQE 306
               +    A+       ++      + +     + + N      +  +   +  +   +
Sbjct: 44  RMELMAAIVALEALKEHAEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVDLWQ 103

Query: 307 YYFASTNGSQISFMWIPSHSNIALNDKADQLAKNSINSKLLD 348
              A+    QI + W+  H+    N++AD+LA+ +  +  L+
Sbjct: 104 RLDAALGQHQIKWEWVKGHAGHPENERADELARAAAMNPTLE 145

>d1v7pa_ d.169.1.1 (A:) Snake coagglutinin alpha chain {Snake (Echis multisquamatus), Ems16 [TaxId: 93050]} Length = 134

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Snake coagglutinin alpha chain
species: Snake (Echis multisquamatus), Ems16 [TaxId: 93050]

 Score = 39.7 bits (91), Expect = 1e-04
 Identities = 17/116 (14%), Positives = 40/116 (34%), Gaps = 6/116 (5%)

Query: 26  ELRCPQHWVQYRDSCYRFVKSPLKTRNDAK--LNCKSLDSDLANVNDADEHGFIMYQLFW 83
           +  CP  W  Y   CY  +  P +   +A+     ++ D  L ++   +E  F+   +  
Sbjct: 1   DFDCPSDWTAYDQHCYLAIGEP-QNWYEAERFCTEQAKDGHLVSIQSREEGNFVAQLVSG 59

Query: 84  QDPQRRKWYFGG---TQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNE 136
              +   + + G    ++        +D  +  +      +S         TN ++
Sbjct: 60  FMHRSEIYVWIGLRDRREEQQCNPEWNDGSKIIYVNWKEGESKMCQGLTKWTNFHD 115

>d1qdda_ d.169.1.1 (A:) Lithostathine, inhibitor of stone formation {Human (Homo sapiens) [TaxId: 9606]} Length = 144

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Lithostathine, inhibitor of stone formation
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (92), Expect = 1e-04
 Identities = 23/155 (14%), Positives = 49/155 (31%), Gaps = 25/155 (16%)

Query: 27  LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDP 86
           + CP+    YR  CY F +   +T  DA L C++           +    +      +  
Sbjct: 12  ISCPEGTNAYRSYCYYFNEDR-ETWVDADLYCQN----------MNSGNLVSVLTQAEGA 60

Query: 87  QRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPA 146
                         N+W+   DP++ +            W    G+      +  +  P+
Sbjct: 61  FVASLIKESGTDDFNVWIGLHDPKKNRA-----------WHWSSGSL-VSYKSWGIGAPS 108

Query: 147 DNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICE 181
                  ++ + S   ++W        +   F+C+
Sbjct: 109 SVNPGYCVSLTSSTGFQKWKDVPCE--DKFSFVCK 141

>d1v7pb_ d.169.1.1 (B:) Snake coagglutinin beta chain {Snake (Echis multisquamatus), Ems16 [TaxId: 93050]} Length = 127

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Snake coagglutinin beta chain
species: Snake (Echis multisquamatus), Ems16 [TaxId: 93050]

 Score = 39.3 bits (90), Expect = 2e-04
 Identities = 11/82 (13%), Positives = 20/82 (24%), Gaps = 3/82 (3%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
           CP  W  +   CY+  +   K   +A+  C          +                  +
Sbjct: 1   CPLGWSSFDQHCYKVFEPV-KNWTEAEEICMQQHKGSRLASIHSSEEEAFVSKLASKALK 59

Query: 89  RKWYFGGT--QQSPNLWVNEDD 108
               + G         W   D+
Sbjct: 60  FTSMWIGLNNPWKDCKWEWSDN 81

>d1j34b_ d.169.1.1 (B:) Snake coagglutinin beta chain {Habu snake (Trimeresurus flavoviridis) [TaxId: 88087]} Length = 123

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Snake coagglutinin beta chain
species: Habu snake (Trimeresurus flavoviridis) [TaxId: 88087]

 Score = 38.5 bits (88), Expect = 3e-04
 Identities = 14/75 (18%), Positives = 20/75 (26%), Gaps = 1/75 (1%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
           CP  W  Y   CY+    P K   DA+  C    +    V+                   
Sbjct: 2   CPSDWSSYEGHCYKPFSEP-KNWADAENFCTQQHAGGHLVSFQSSEEADFVVKLAFQTFG 60

Query: 89  RKWYFGGTQQSPNLW 103
              ++ G     N  
Sbjct: 61  HSIFWMGLSNVWNQC 75

>d1pwba1 d.169.1.1 (A:235-355) Surfactant protein, lectin domain {Human (Homo sapiens), SP-D [TaxId: 9606]} Length = 121

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Surfactant protein, lectin domain
species: Human (Homo sapiens), SP-D [TaxId: 9606]

 Score = 38.5 bits (88), Expect = 3e-04
 Identities = 10/86 (11%), Positives = 25/86 (29%), Gaps = 1/86 (1%)

Query: 32  HWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKW 91
           +     +  ++      K   +A+L C      LA+   A E+  +   +  ++      
Sbjct: 2   NGQSVGEKIFKTAGFV-KPFTEAQLLCTQAGGQLASPRSAAENAALQQLVVAKNEAAFLS 60

Query: 92  YFGGTQQSPNLWVNEDDPQRRKWYFG 117
                 +    +   +      W  G
Sbjct: 61  MTDSKTEGKFTYPTGESLVYSNWAPG 86

>d1wk1a_ d.169.1.1 (A:) Hypothetical protein F28B4.3 {Caenorhabditis elegans [TaxId: 6239]} Length = 150

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Hypothetical protein F28B4.3
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 38.8 bits (89), Expect = 4e-04
 Identities = 20/142 (14%), Positives = 40/142 (28%), Gaps = 23/142 (16%)

Query: 40  CYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQS 99
                   L +   A+  C S    LA+    D++ F              ++ G  + S
Sbjct: 10  FLTVNDDIL-SMPQARNFCASAGGYLADDLGDDKNNFYSSIAANTQ-----FWIGLFKNS 63

Query: 100 PNLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFS 159
              +  +               +  +    +G            EP+++  R  + +   
Sbjct: 64  DGQFYWDRG-----QGINPDLLNQPITYWANG------------EPSNDPTRQCVYFDGR 106

Query: 160 QSLKRWGFERVTGMEPLLFICE 181
              K   +   T   P  FIC+
Sbjct: 107 SGDKSKVWTTDTCATPRPFICQ 128

>d1umra_ d.169.1.1 (A:) Snake coagglutinin alpha chain {South american rattlesnake (Crotalus durissus terrificus), convulxin [TaxId: 8732]} Length = 135

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Snake coagglutinin alpha chain
species: South american rattlesnake (Crotalus durissus terrificus), convulxin [TaxId: 8732]

 Score = 37.8 bits (86), Expect = 5e-04
 Identities = 20/107 (18%), Positives = 30/107 (28%), Gaps = 5/107 (4%)

Query: 27  LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDP 86
           L CP  W  Y   CYR          DA+  C         V+            F    
Sbjct: 2   LHCPSDWYYYDQHCYRIFNEE-MNWEDAEWFCTKQAKGAHLVSIKSAK----EADFVAWM 56

Query: 87  QRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTN 133
             +      +  S  L V   + Q    +  G+  S +  ++   T 
Sbjct: 57  VTQNIEESFSHVSIGLRVQNKEKQCSTKWSDGSSVSYDNLLDLYITK 103

>d1fvua_ d.169.1.1 (A:) Snake coagglutinin alpha chain {Jararaca (Bothrops jararaca), botrocetin [TaxId: 8724]} Length = 133

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Snake coagglutinin alpha chain
species: Jararaca (Bothrops jararaca), botrocetin [TaxId: 8724]

 Score = 37.8 bits (86), Expect = 7e-04
 Identities = 15/98 (15%), Positives = 27/98 (27%), Gaps = 3/98 (3%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCK--SLDSDLANVNDADEHGFIMYQLFWQDP 86
           CP  W  Y  +CY+F +       DA+  C   +    L ++    +    +  L  ++ 
Sbjct: 2   CPSGWSSYEGNCYKFFQQK-MNWADAERFCSEQAKGGHLVSIKIYSKEKDFVGDLVTKNI 60

Query: 87  QRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPN 124
           Q    Y     +  N                       
Sbjct: 61  QSSDLYAWIGLRVENKEKQCSSEWSDGSSVSYENVVER 98

>d1j34a_ d.169.1.1 (A:) Snake coagglutinin alpha chain {Habu snake (Trimeresurus flavoviridis) [TaxId: 88087]} Length = 129

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Snake coagglutinin alpha chain
species: Habu snake (Trimeresurus flavoviridis) [TaxId: 88087]

 Score = 37.1 bits (84), Expect = 0.001
 Identities = 26/154 (16%), Positives = 40/154 (25%), Gaps = 26/154 (16%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
           CP  W  Y   CY+  K   KT +DA+  C         V+            F      
Sbjct: 2   CPSGWSSYEGHCYKPFKLY-KTWDDAERFCTEQAKGGHLVSIESAG----EADFVAQLVT 56

Query: 89  RKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADN 148
                  +     L V   + Q    +  G+  S   W                    + 
Sbjct: 57  ENIQNTKSYVWIGLRVQGKEKQCSSEWSDGSSVSYENW-------------------IEA 97

Query: 149 VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 182
             +  L        ++W        +   F+CEA
Sbjct: 98  ESKTCLGLEKETGFRKWVNIYCG--QQNPFVCEA 129

>d1g1sa1 d.169.1.1 (A:1-118) P-selectin, C-lectin domain {Human (Homo sapiens) [TaxId: 9606]} Length = 118

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: P-selectin, C-lectin domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (82), Expect = 0.001
 Identities = 14/91 (15%), Positives = 29/91 (31%), Gaps = 3/91 (3%)

Query: 40  CYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQS 99
            Y +      + N ++  C++  +DL  + + +E  ++   L +       W        
Sbjct: 2   TYHYSTKA-YSWNISRKYCQNRYTDLVAIQNKNEIDYLNKVLPYYSSYY--WIGIRKNNK 58

Query: 100 PNLWVNEDDPQRRKWYFGGTQQSPNLWVNED 130
              WV        +       +  N   NED
Sbjct: 59  TWTWVGTKKALTNEAENWADNEPNNKRNNED 89

>d1sb2a1 d.169.1.1 (A:1-132) Snake coagglutinin alpha chain {Malayan pit viper (Calloselasma rhodostoma), rhodocetin [TaxId: 8717]} Length = 132

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Snake coagglutinin alpha chain
species: Malayan pit viper (Calloselasma rhodostoma), rhodocetin [TaxId: 8717]

 Score = 36.3 bits (82), Expect = 0.002
 Identities = 21/118 (17%), Positives = 39/118 (33%), Gaps = 17/118 (14%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFI--------- 77
           CP  W   +  CYR  K   KT  +A+  C     ++ L ++ +  E  F+         
Sbjct: 2   CPDGWSSTKSYCYRPFKEK-KTWEEAERFCTEQEKEAHLVSMENRLEAVFVDMVMENNFE 60

Query: 78  -----MYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNED 130
                 +     + + ++     +  S   + N  +P   K +    Q     W   D
Sbjct: 61  NKIYRSWIGLKIENKGQRSNLEWSDGSSISYENLYEPYMEKCFLMDHQSGLPKWHTAD 118

>d1s1ta1 c.55.3.1 (A:430-539) HIV RNase H (Domain of reverse transcriptase) {Human immunodeficiency virus type 1 [TaxId: 11676]} Length = 110

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Ribonuclease H-like
family: Ribonuclease H
domain: HIV RNase H (Domain of reverse transcriptase)
species: Human immunodeficiency virus type 1 [TaxId: 11676]

 Score = 35.7 bits (82), Expect = 0.002
 Identities = 14/100 (14%), Positives = 35/100 (35%), Gaps = 7/100 (7%)

Query: 227 SKRNSNTG-FAFIINNENFQYRLPHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKS 285
           + R +  G   ++ N    +     + +    E  AI+  ++        +  I +D++ 
Sbjct: 17  ANRETKLGKAGYVTNRGRQKVVTLTDTTNQKTELQAIYLALQD----SGLEVNIVTDSQY 72

Query: 286 VLNGIDNIQQRNNIIQLIKQEYYFASTNGSQISFMWIPSH 325
            L  I    Q +     +  +         ++   W+P+H
Sbjct: 73  ALGIIQ--AQPDQSESELVNQIIEQLIKKEKVYLAWVPAH 110

>d1c3aa_ d.169.1.1 (A:) Snake coagglutinin alpha chain {Habu snake (Trimeresurus flavoviridis), flavocetin-A [TaxId: 88087]} Length = 135

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Snake coagglutinin alpha chain
species: Habu snake (Trimeresurus flavoviridis), flavocetin-A [TaxId: 88087]

 Score = 35.9 bits (81), Expect = 0.003
 Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 3/77 (3%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDP 86
           C   W  Y   CY+    P K   DA+  C+     S L ++  + E  F+   +  +  
Sbjct: 4   CIPGWSAYDRYCYQAFSKP-KNWEDAESFCEEGVKTSHLVSIESSGEGDFVAQLVAEKIK 62

Query: 87  QRRKWYFGGTQQSPNLW 103
              ++ + G +      
Sbjct: 63  TSFQYVWIGLRIQNKEQ 79

>d1tn3a_ d.169.1.1 (A:) Tetranectin {Human (Homo sapiens) [TaxId: 9606]} Length = 137

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Tetranectin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.5 bits (80), Expect = 0.004
 Identities = 15/108 (13%), Positives = 32/108 (29%), Gaps = 4/108 (3%)

Query: 25  LELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQ 84
           L+  C +   +    C+       KT ++A  +C S    L+      E+  +   L   
Sbjct: 2   LQTVCLKGT-KVHMKCFLAFTQT-KTFHEASEDCISRGGTLSTPQTGSENDALYEYLRQS 59

Query: 85  DPQRRKWYFGGTQQSPNLWVNEDDPQRRK--WYFGGTQQSPNLWVNED 130
                + + G    +      +    R     +       P+    E+
Sbjct: 60  VGNEAEIWLGLNDMAAEGTWVDMTGARIAYKNWETEITAQPDGGKTEN 107

>d1r13a1 d.169.1.1 (A:110-228) Surfactant protein, lectin domain {Rat (Rattus norvegicus), SP-A [TaxId: 10116]} Length = 119

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Surfactant protein, lectin domain
species: Rat (Rattus norvegicus), SP-A [TaxId: 10116]

 Score = 35.0 bits (79), Expect = 0.004
 Identities = 11/98 (11%), Positives = 24/98 (24%), Gaps = 5/98 (5%)

Query: 33  WVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWY 92
            +   D  +          +  K  C     ++A     +E+  I      +      + 
Sbjct: 2   MLSVGDKVFSTNGQS-VNFDTIKEMCTRAGGNIAVPRTPEENEAIAS--IAKKYNNYVYL 58

Query: 93  FGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNED 130
                Q+P  +   D        +   +  P     E 
Sbjct: 59  GMIEDQTPGDFHYLDGASVSYTNWYPGE--PRGQGKEK 94

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	483
d1qdda_	144	Lithostathine, inhibitor of stone formation {Human	99.92
d1jzna_	135	Galactose-specific C-type lectin {Western diamondb	99.92
d1gz2a_	139	Ovocleidin-17 {Chicken (Gallus gallus) [TaxId: 903	99.91
d1xpha1	130	DC-SIGNR (DC-SIGN related receptor) {Human (Homo s	99.91
d1tn3a_	137	Tetranectin {Human (Homo sapiens) [TaxId: 9606]}	99.91
d1wmza_	140	Lectin CEL-I {Cucumaria echinata [TaxId: 40245]}	99.91
d1uv0a_	140	Pancreatitis-associated protein 1 {Human (Homo sap	99.9
d2afpa_	129	Type II antifreeze protein {Sea raven (Hemitripter	99.9
d1tdqb_	126	Aggrecan core protein {Rat (Rattus norvegicus) [Ta	99.9
d1c3aa_	135	Snake coagglutinin alpha chain {Habu snake (Trimer	99.9
d1umra_	135	Snake coagglutinin alpha chain {South american rat	99.9
d1dv8a_	128	H1 subunit of the asialoglycoprotein receptor {Hum	99.9
d1fvua_	133	Snake coagglutinin alpha chain {Jararaca (Bothrops	99.89
d1mu2a1	126	HIV RNase H (Domain of reverse transcriptase) {Hum	99.89
d1t8da1	143	Low affinity immunoglobulin epsilon Fc receptor {H	99.89
d1ypqa1	131	Oxidised low density lipoprotein {Human (Homo sapi	99.89
d1e87a_	117	CD69 {Human (Homo sapiens) [TaxId: 9606]}	99.89
d1egga_	136	Macrophage mannose receptor, CRD4 {Human (Homo sap	99.89
d1v7pb_	127	Snake coagglutinin beta chain {Snake (Echis multis	99.89
d1j34a_	129	Snake coagglutinin alpha chain {Habu snake (Trimer	99.89
d1oz7a_	131	Snake coagglutinin alpha chain {Saw-scaled viper (	99.89
d1hq8a_	123	NK cell-activating receptor nkg2d {Mouse (Mus musc	99.89
d1oz7b_	123	Snake coagglutinin beta chain {Saw-scaled viper (E	99.89
d1sb2b1	127	Snake coagglutinin beta chain {Malayan pit viper (	99.89
d1jwia_	124	Snake coagglutinin alpha chain {Puff adder (Bitis	99.88
d3bdwa1	121	CD94 {Human (Homo sapiens) [TaxId: 9606]}	99.88
d1sb2a1	132	Snake coagglutinin alpha chain {Malayan pit viper	99.88
d1v7pa_	134	Snake coagglutinin alpha chain {Snake (Echis multi	99.88
d1j34b_	123	Snake coagglutinin beta chain {Habu snake (Trimere	99.88
d1umrc_	125	Snake coagglutinin beta chain {South american ratt	99.88
d1c3ab_	125	Snake coagglutinin beta chain {Habu snake (Trimere	99.88
d1fvub_	125	Snake coagglutinin beta chain {Jararaca (Bothrops	99.88
d1jwib_	123	Snake coagglutinin beta chain {Puff adder (Bitis a	99.87
d3c8ja1	122	NK cell receptor {Mouse (Mus musculus), ly49-c [Ta	99.87
d1qo3c_	133	NK cell receptor {Mouse (Mus musculus), ly49-a [Ta	99.87
d1pwba1	121	Surfactant protein, lectin domain {Human (Homo sap	99.85
d2msba_	112	Mannose-binding protein A, C-lectin domain {Rat (R	99.85
d1jl1a_	152	RNase H (RNase HI) {Escherichia coli [TaxId: 562]}	99.84
d1r13a1	119	Surfactant protein, lectin domain {Rat (Rattus nor	99.84
d1rila_	147	RNase H (RNase HI) {Thermus thermophilus [TaxId: 2	99.84
d1hupa1	117	Mannose-binding protein A, C-lectin domain {Human	99.84
d1rdl1_	111	Mannose-binding protein A, C-lectin domain {Rat (R	99.82
d1h8ua_	115	Eosinophil major basic protein {Human (Homo sapien	99.81
d1kg0c_	136	EBV gp42 {Epstein-Barr virus [TaxId: 10376]}	99.77
d1wk1a_	150	Hypothetical protein F28B4.3 {Caenorhabditis elega	99.77
d1g1ta1	118	E-selectin, C-lectin domain {Human (Homo sapiens)	99.72
d1s1ta1	110	HIV RNase H (Domain of reverse transcriptase) {Hum	99.71
d1byfa_	123	Lectin TC14 {Tunicate (Polyandrocarpa misakiensis)	99.7
d1g1sa1	118	P-selectin, C-lectin domain {Human (Homo sapiens)	99.7
d1zbfa1	132	BH0863-like Ribonuclease H {Bacillus halodurans [T	99.57

>d1qdda_ d.169.1.1 (A:) Lithostathine, inhibitor of stone formation {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Lithostathine, inhibitor of stone formation
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.3e-25  Score=194.23  Aligned_cols=131  Identities=18%  Similarity=0.363  Sum_probs=113.6

Q ss_pred             cCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhc-CCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccc
Q psy14885         26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSL-DSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV  104 (483)
Q Consensus        26 ~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~-g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wi  104 (483)
                      ..+||+||+.|++.||+++... ++|.+|+..|++. ||+||+|++++|++||..++.........||||++...     
T Consensus        11 ~~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~gg~L~~i~s~~e~~~l~~~l~~~~~~~~~~WiGl~~~~-----   84 (144)
T d1qdda_          11 RISCPEGTNAYRSYCYYFNEDR-ETWVDADLYCQNMNSGNLVSVLTQAEGAFVASLIKESGTDDFNVWIGLHDPK-----   84 (144)
T ss_dssp             GTSCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHTTSCEECCCCSHHHHHHHHHHHHHTTCCCSEEEEEEECTT-----
T ss_pred             CCcCCCCCEEECCEEEEEECCc-cCHHHHHHHHHhccccccceEEeeecchhhhhccccccccccceeeeeeccc-----
Confidence            4579999999999999999995 9999999999986 78999999999999999999877555566777776533     


Q ss_pred             ccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885        105 NEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS  183 (483)
Q Consensus       105 g~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~  183 (483)
                                       ..+.|.|+||+++.+  .+|.+ +|++...++|+.+....+..+|.+.+|+  ..++||||++
T Consensus        85 -----------------~~~~w~W~dGs~~~y--~~W~~~~P~~~~~~~C~~~~~~~~~~~W~~~~C~--~~~~fICe~k  143 (144)
T d1qdda_          85 -----------------KNRAWHWSSGSLVSY--KSWGIGAPSSVNPGYCVSLTSSTGFQKWKDVPCE--DKFSFVCKFK  143 (144)
T ss_dssp             -----------------SSSCCEETTCCCCCC--CCBCTTCSCSSSCCSEEEEEGGGTTCSEEEECTT--SCEEEEEEEE
T ss_pred             -----------------ccceeEecCCCeeec--ccccCCCCCCCCCccEEEEEccCCCCcEEecCCC--CCeEEEEEEC
Confidence                             457899999998876  78999 9988777899999877665679999999  9999999985

>d1jzna_ d.169.1.1 (A:) Galactose-specific C-type lectin {Western diamondback rattlesnake (Crotalus atrox) [TaxId: 8730]}

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Galactose-specific C-type lectin
species: Western diamondback rattlesnake (Crotalus atrox) [TaxId: 8730]

Probab=99.92  E-value=3e-25  Score=189.78  Aligned_cols=130  Identities=16%  Similarity=0.287  Sum_probs=111.5

Q ss_pred             CCCcccccccCCeEEEEecCCCCCHHHHHHHhhhc--CCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccc
Q psy14885         27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSL--DSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV  104 (483)
Q Consensus        27 ~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~--g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wi  104 (483)
                      ..||+||..+++.||+++... ++|.+|+..|+++  |++|+.|++.+|+.+|...+.........||||+++..     
T Consensus         1 n~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~~~g~~L~~i~s~~e~~~i~~~l~~~~~~~~~~WiGl~~~~-----   74 (135)
T d1jzna_           1 NNCPLDWLPMNGLCYKIFNQL-KTWEDAEMFCRKYKPGCHLASFHRYGESLEIAEYISDYHKGQENVWIGLRDKK-----   74 (135)
T ss_dssp             CCSCTTSEEETTEEEEEEEEE-ECHHHHHHHHHHHSSSEEECCCCSHHHHHHHHHHHHHHCCSSCCEEEEEECTT-----
T ss_pred             CCCCCCCEeECCEEEEEECcc-cCHHHHHHHhhhccccccccccCCHHHHHHHHHhhhhccCCCccEEEEEeecC-----
Confidence            369999999999999999995 9999999999876  68999999999999999999877555666777776433     


Q ss_pred             ccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcc-cCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885        105 NEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNV-QRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA  182 (483)
Q Consensus       105 g~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~-~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~  182 (483)
                                       .++.|.|+||+++.+  .+|.+ +|++.. .++||.+....+...|.+.+|+  ..++||||+
T Consensus        75 -----------------~~~~~~W~dg~~~~~--~~W~~~~P~~~~~~~~Cv~~~~~~~~~~W~~~~C~--~~~~fiCe~  133 (135)
T d1jzna_          75 -----------------KDFSWEWTDRSCTDY--LTWDKNQPDHYQNKEFCVELVSLTGYRLWNDQVCE--SKDAFLCQC  133 (135)
T ss_dssp             -----------------SSSCCEETTCCCCCC--CCBCTTCCCCGGGCCCEEEECGGGTTCSEEEECTT--SCEEEEEEE
T ss_pred             -----------------cccceeecCCceeec--cccCCCCCCCCCCCCCEEEEEecCCCCcEEeeCCC--CCEEEEeee
Confidence                             467899999999876  78999 997654 5789999876665679999999  999999998


Q ss_pred             c
Q psy14885        183 S  183 (483)
Q Consensus       183 ~  183 (483)
                      +
T Consensus       134 k  134 (135)
T d1jzna_         134 K  134 (135)
T ss_dssp             C
T ss_pred             c
Confidence            6

>d1gz2a_ d.169.1.1 (A:) Ovocleidin-17 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Ovocleidin-17
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.91  E-value=4.4e-25  Score=189.58  Aligned_cols=134  Identities=22%  Similarity=0.350  Sum_probs=107.4

Q ss_pred             CcccccccCCeEEEEecCCCCCHHHHHHHhhhc--CCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccccc
Q psy14885         29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSL--DSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNE  106 (483)
Q Consensus        29 C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~--g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~  106 (483)
                      ||+||+.|+++||+++..+ ++|.+|+..|+.+  ||+|++|+|.+|++||..++........    ........+|||+
T Consensus         2 Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~L~~i~s~~e~~~i~~~l~~~~~~~~----~~~~~~~~~WiGl   76 (139)
T d1gz2a_           2 CGPGWVPTPGGCLGFFSRE-LSWSRAESFCRRWGPGSHLAAVRSAAELRLLAELLNASRGGDG----SGEGADGRVWIGL   76 (139)
T ss_dssp             CCTTCEEETTEEEEEEEEE-ECHHHHHHHHHTTCTTEEECCCCSHHHHHHHHHHHHCSSCCSS----SCCCCSSCEEEEE
T ss_pred             CCCCCEeECCEEEEEeCee-cCHHHHHhhhhcccCCceecchhhHHHHHHHHHHHHhhccccc----cccccccceeeee
Confidence            9999999999999999995 9999999999865  8999999999999999999865422110    0011123456665


Q ss_pred             CcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885        107 DDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS  183 (483)
Q Consensus       107 ~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~  183 (483)
                      ++           ...++.|.|+||+++.+  ++|.+ +|++. +++|+.+....+..+|.+.+|+  ..++||||++
T Consensus        77 ~~-----------~~~~~~w~W~dgs~~~y--~~W~~~~p~~~-~~~C~~l~~~~~~~~W~~~~C~--~~~~fiCe~~  138 (139)
T d1gz2a_          77 HR-----------PAGSRSWRWSDGTAPRF--ASWHRTAKARR-GGRCAALRDEEAFTSWAARPCT--ERNAFVCKAA  138 (139)
T ss_dssp             EC-----------CTTCSSCEETTSCCCCC--CCBCSSSGGGC-SCSEEEECTTTTSSCEEEECTT--CCEEEEEEEE
T ss_pred             ee-----------cccCCceEeccCCccee--ecccCCCCCCC-CCcEEEEEecCCCCcEEecCCC--CCEeEEEEEc
Confidence            44           33567899999999876  88999 88764 5789999876666679999999  9999999997

>d1xpha1 d.169.1.1 (A:265-394) DC-SIGNR (DC-SIGN related receptor) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: DC-SIGNR (DC-SIGN related receptor)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.3e-24  Score=184.28  Aligned_cols=127  Identities=21%  Similarity=0.468  Sum_probs=105.7

Q ss_pred             cCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885         26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN  105 (483)
Q Consensus        26 ~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig  105 (483)
                      +.+||+||+.|+++||+++..+ ++|.+|+..|+++||+||+|+|.+|++|+..++....   ..+|||+.+.       
T Consensus         1 c~~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~gg~La~i~s~~~~~~~~~~~~~~~---~~~wig~~~~-------   69 (130)
T d1xpha1           1 CRHCPKDWTFFQGNCYFMSNSQ-RNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSN---RFSWMGLSDL-------   69 (130)
T ss_dssp             SCBCCTTCEEETTEEEEECSSC-BCHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHHHHT---CCEEEEEECC-------
T ss_pred             CCCCCCCCEEECCEEEEEECcc-cCHHHHHHHHhhcCCeEeeeCCHHHhhhhhhhhcccc---ceeeeeeecc-------
Confidence            4689999999999999999995 9999999999999999999999999999998876542   3345555432       


Q ss_pred             cCcccccccccCCcCCCCCccccCCCCcccc-ccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885        106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNE-LDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS  183 (483)
Q Consensus       106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~-~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~  183 (483)
                                     ..++.|.|+||+++.. ...+|.+ +|++.++++||.+..    .+|.+.+|+  ..++||||||
T Consensus        70 ---------------~~~~~~~W~dg~~~~~~~~~~W~~~~P~~~~~~~Cv~~~~----~~w~~~~C~--~~~~fICe~p  128 (130)
T d1xpha1          70 ---------------NQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCAEFSG----SGWNDNRCD--VDNYWICKKP  128 (130)
T ss_dssp             ---------------STTCCCEETTSCBCCGGGGGGBCTTCCCCCTTCCEEEEET----TEEEEECTT--SCBEEEEEEE
T ss_pred             ---------------CcccceEeccccccccccccccCCcCCCCCCCCcEEEEEC----CEEEECCCC--CCEEEEEEEe
Confidence                           2567899999987643 1278999 998877788999953    259999999  9999999998


Q ss_pred             h
Q psy14885        184 I  184 (483)
Q Consensus       184 ~  184 (483)
                      .
T Consensus       129 A  129 (130)
T d1xpha1         129 A  129 (130)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1tn3a_ d.169.1.1 (A:) Tetranectin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Tetranectin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=5.2e-25  Score=188.83  Aligned_cols=128  Identities=16%  Similarity=0.289  Sum_probs=107.7

Q ss_pred             CCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccccc
Q psy14885         27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNE  106 (483)
Q Consensus        27 ~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~  106 (483)
                      ..||+|| .++++||+++..+ ++|.+|+..|+++||+||+|+|.+|++||..++.........||||+++..       
T Consensus         4 t~C~~G~-~~~~~CY~~~~~~-~tw~~A~~~C~~~gg~La~i~s~~e~~~l~~~l~~~~~~~~~~WiGl~~~~-------   74 (137)
T d1tn3a_           4 TVCLKGT-KVHMKCFLAFTQT-KTFHEASEDCISRGGTLSTPQTGSENDALYEYLRQSVGNEAEIWLGLNDMA-------   74 (137)
T ss_dssp             CEEEECS-SSSEEEEEEEEEE-ECHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHHHHTCTTCEEEEEEEEEE-------
T ss_pred             CcCCCCe-EECCEEEEEeCcc-CCHHHHHHHHHHcCCccccccchHhcccccccccccccccccEeeeeccCC-------
Confidence            5699999 7899999999995 999999999999999999999999999999999876556667777776432       


Q ss_pred             CcccccccccCCcCCCCCccccCCCCccccccccCCC----CCCCcccCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885        107 DDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP----EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA  182 (483)
Q Consensus       107 ~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~----~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~  182 (483)
                                     .++.|.|.||+++.+  ++|.+    +|++...++|+.+..... +.|.+.+|+  ..++||||+
T Consensus        75 ---------------~~~~w~w~dg~~~~y--~~w~~~~p~~p~~~~~~~C~~~~~~~~-~~W~~~~C~--~~~~fICe~  134 (137)
T d1tn3a_          75 ---------------AEGTWVDMTGARIAY--KNWETEITAQPDGGKTENCAVLSGAAN-GKWFDKRCR--DQLPYICQF  134 (137)
T ss_dssp             ---------------ETTEEEETTSCBCSC--CCBCCTTTCSSCCGGGCCEEEEETTTT-TEEEEECTT--SCEEEEEEE
T ss_pred             ---------------cccccEeCCCCeeee--eeeccccccCCCCCCcceeEEEEeCCC-CEEEeeCCC--CCEEEEEEE
Confidence                           467899999998876  56654    666655788999975543 469999999  999999999


Q ss_pred             c
Q psy14885        183 S  183 (483)
Q Consensus       183 ~  183 (483)
                      +
T Consensus       135 ~  135 (137)
T d1tn3a_         135 G  135 (137)
T ss_dssp             E
T ss_pred             e
Confidence            7

>d1wmza_ d.169.1.1 (A:) Lectin CEL-I {Cucumaria echinata [TaxId: 40245]}

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Lectin CEL-I
species: Cucumaria echinata [TaxId: 40245]

Probab=99.91  E-value=1.6e-24  Score=186.33  Aligned_cols=129  Identities=20%  Similarity=0.443  Sum_probs=109.6

Q ss_pred             CCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCc-------ccccCCHhHHHHHHHHhhhcCCCCCceeeecccCC
Q psy14885         27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSD-------LANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQS   99 (483)
Q Consensus        27 ~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~-------L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~   99 (483)
                      ..||+||..|+++||+++... ++|.+|+..|+++||.       |++|++.+|+.||..++.........||||+++..
T Consensus         1 n~Cp~gw~~~~~~CY~~~~~~-~~~~~A~~~C~~~g~~l~~~~~~L~~i~~~~e~~~~~~~~~~~~~~~~~~WiGl~~~~   79 (140)
T d1wmza_           1 NQCPTDWEAEGDHCYRFFNTL-TTWENAHHECVSYSCSTLNVRSDLVSVHSAAEQAYVFNYWRGIDSQAGQLWIGLYDKY   79 (140)
T ss_dssp             CCCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHTTCBGGGTEEEEECCCCSHHHHHHHHHHHHHHCCSSCCEEEEEECSS
T ss_pred             CCCCCCCEeeCCEEEEEECcc-CCHHHHHHHHHHhhcccccccceeeeeCCHHHHHhhhhhhccccccccceeeeeeecc
Confidence            369999999999999999995 9999999999998854       89999999999999998876655666777776433


Q ss_pred             CCcccccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcc-cCCeEEEecccccccccccccCCCCcee
Q psy14885        100 PNLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNV-QRDYLAYSFSQSLKRWGFERVTGMEPLL  177 (483)
Q Consensus       100 ~~~Wig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~-~~~Cv~~~~~~~~~~W~~~~C~~~~~~~  177 (483)
                                            .++.|.|+||+++.+  ++|.+ +|++.. .++|+.+..... +.|.+.+|+  ..++
T Consensus        80 ----------------------~~~~w~W~dG~~~~y--~~W~~g~P~~~~~~~~c~~~~~~~~-~~W~~~~C~--~~~~  132 (140)
T d1wmza_          80 ----------------------NEGDFIWTDGSKVGY--TKWAGGQPDNWNNAEDYGQFRHTEG-GAWNDNSAA--AQAK  132 (140)
T ss_dssp             ----------------------STTCCEETTCCCCCC--CCBCTTCCCCGGGCEEEEEECSSTT-TCEEEEETT--CCEE
T ss_pred             ----------------------ccceeeecCCccccc--ccccccccccCCCCccEEEEEeCCC-CEEEeeCCC--CCEe
Confidence                                  567899999999876  88999 998754 568999865433 469999999  9999


Q ss_pred             eeeecc
Q psy14885        178 FICEAS  183 (483)
Q Consensus       178 fvCe~~  183 (483)
                      ||||.+
T Consensus       133 fICe~~  138 (140)
T d1wmza_         133 YMCKLT  138 (140)
T ss_dssp             EEEEEE
T ss_pred             EEEEEe
Confidence            999987

>d1uv0a_ d.169.1.1 (A:) Pancreatitis-associated protein 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Pancreatitis-associated protein 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=3.1e-24  Score=184.40  Aligned_cols=135  Identities=20%  Similarity=0.324  Sum_probs=112.3

Q ss_pred             CCCcccccccCCeEEEEecCCCCCHHHHHHHhhhc-CCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885         27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSL-DSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN  105 (483)
Q Consensus        27 ~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~-g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig  105 (483)
                      .+||+||+.|+++||+++... ++|.+|+..|+++ ||+||+|+|.+|++||..++.........||||+++.....   
T Consensus         3 ~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~gg~La~i~s~~e~~~l~~~l~~~~~~~~~~WiGl~~~~~~~---   78 (140)
T d1uv0a_           3 IRCPKGSKAYGSHCYALFLSP-KSWTDADLACQKRPSGNLVSVLSGAEGSFVSSLVKSIGNSYSYVWIGLHDPTQGT---   78 (140)
T ss_dssp             CCCCTTCEEETTEEEEEEEEE-ECHHHHHHHHTTSTTCEECCCCSHHHHHHHHHHHTTSCTTCCEEEEEEECTTTTC---
T ss_pred             CccCcCcEeeCCEEEEEECCc-cCHHHHHHhhhccccceecccCCHHHHHHHHHhhhccccccceeEEeeecccccc---
Confidence            579999999999999999995 9999999999875 89999999999999999999877656677888887533111   


Q ss_pred             cCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885        106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS  183 (483)
Q Consensus       106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~  183 (483)
                                    ......|.|+||+++.+  .+|.+ +|+..+.++|+.+....+...|++.+|+  ..++||||..
T Consensus        79 --------------~~~~~~w~w~dg~~~~~--~~w~~~~~~~~~~~~C~~~~~~~~~~~W~~~~C~--~~~~fICe~t  139 (140)
T d1uv0a_          79 --------------EPNGEGWEWSSSDVMNY--FAWERNPSTISSPGHCASLSRSTAFLRWKDYNCN--VRLPYVCKFT  139 (140)
T ss_dssp             --------------C--CCCCEETTCCCCCC--CCBSSCGGGSSSCCSEEEEEGGGTTCSEEEECTT--SCEEEEEEEC
T ss_pred             --------------cCCCCceEccCCCcccc--cccCCCCCCCCCCCCEEEEEccCCCCeEEecCCC--CCEeEEEEEC
Confidence                          11345799999999876  78998 7766567899999877665679999999  9999999975

>d2afpa_ d.169.1.1 (A:) Type II antifreeze protein {Sea raven (Hemitripterus americanus) [TaxId: 8094]}

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Type II antifreeze protein
species: Sea raven (Hemitripterus americanus) [TaxId: 8094]

Probab=99.90  E-value=1.1e-24  Score=184.91  Aligned_cols=124  Identities=21%  Similarity=0.415  Sum_probs=104.8

Q ss_pred             cCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885         26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN  105 (483)
Q Consensus        26 ~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig  105 (483)
                      ...||+||+.|+++||+++..+ ++|.+|+..|+++||+||.|+|.+|++||..+..      ..           .|||
T Consensus         4 g~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~gg~La~i~s~~e~~fl~~~~~------~~-----------~Wig   65 (129)
T d2afpa_           4 GPNCPAGWQPLGDRCIYYETTA-MTWALAETNCMKLGGHLASIHSQEEHSFIQTLNA------GV-----------VWIG   65 (129)
T ss_dssp             CCSSCSSSCCCSSSEECCCCSC-CCHHHHHHHHHHHSCEECCCSSSHHHHHHHHHCS------SC-----------BCCS
T ss_pred             CCCCCCCCEEECCEEEEEECcc-cCHHHHHHHHHhcCCeEeeeeehhcchhhccccc------Cc-----------eeee
Confidence            3469999999999999999995 9999999999999999999999999999988652      22           4555


Q ss_pred             cCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885        106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS  183 (483)
Q Consensus       106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~  183 (483)
                      +.+           ...++.|.|+||+++.+  .+|.+ +|++..++.|+.+..... ..|.+.+|+  ..++||||+.
T Consensus        66 ~~~-----------~~~~~~w~W~dgs~~~y--~~W~~~~P~~~~~~~c~~~~~~~~-~~W~~~~C~--~~~~~ICe~t  128 (129)
T d2afpa_          66 GSA-----------CLQAGAWTWSDGTPMNF--RSWCSTKPDDVLAACCMQMTAAAD-QCWDDLPCP--ASHKSVCAMT  128 (129)
T ss_dssp             CBC-----------SSSSSCCBSSSSCCCCC--CCSSSCCSCCSTTCCBCCBCCSSS-SCBCCBCSC--CCCCCCEEEC
T ss_pred             eec-----------ccccceeeccCCCeeec--ccccCCCCCCCCCCcEEEEECCCC-CcEEeeCCC--CCEeEEEEEe
Confidence            543           33578899999999876  88999 998877788998865443 479999999  9999999985

>d1tdqb_ d.169.1.1 (B:) Aggrecan core protein {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Aggrecan core protein
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.90  E-value=2.4e-24  Score=181.77  Aligned_cols=121  Identities=20%  Similarity=0.438  Sum_probs=103.4

Q ss_pred             CCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccC
Q psy14885         28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNED  107 (483)
Q Consensus        28 ~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~  107 (483)
                      +||+||+.|+++||+|+..+ ++|.+|+..|+.+||+||+|+|++|++||..++.      ..+|||++...        
T Consensus         2 ~Cp~gw~~~~~~CY~~~~~~-~sw~~A~~~C~~~g~~La~i~~~~e~~~l~~~~~------~~~wigl~~~~--------   66 (126)
T d1tdqb_           2 QCEEGWTKFQGHCYRHFPDR-ETWVDAERRCREQQSHLSSIVTPEEQEFVNKNAQ------DYQWIGLNDRT--------   66 (126)
T ss_dssp             CCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHC------SCEEEEEECSS--------
T ss_pred             CCCCCCeeeCCEEEEEECcc-cCHHHHHHHHHhhCcEEeEECChhHhhhhhcccc------ceeeeeccccc--------
Confidence            69999999999999999995 9999999999999999999999999999998763      24566665332        


Q ss_pred             cccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcc--cCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885        108 DPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNV--QRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA  182 (483)
Q Consensus       108 ~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~--~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~  182 (483)
                                    .++.|.|+||+++.+  .+|.+ +|++..  .++|+.+..... +.|.+.+|+  ..++|||||
T Consensus        67 --------------~~~~~~W~dg~~~~~--~~w~~~~p~~~~~~~~~C~~~~~~~~-~~W~~~~C~--~~~~fICek  125 (126)
T d1tdqb_          67 --------------IEGDFRWSDGHSLQF--EKWRPNQPDNFFATGEDCVVMIWHER-GEWNDVPCN--YQLPFTCKK  125 (126)
T ss_dssp             --------------STTCCEETTCCCCCC--CCBCTTCCCCCSTTTEEEEEEETTTT-TEEEEEETT--SCEEEEEEE
T ss_pred             --------------CCCccCcCCCCCccc--ccccccCCCccccCCcceEEEEeCCC-CeEEecCCC--CCEEEEeee
Confidence                          568899999999876  88999 997743  467999976544 469999999  999999998

>d1c3aa_ d.169.1.1 (A:) Snake coagglutinin alpha chain {Habu snake (Trimeresurus flavoviridis), flavocetin-A [TaxId: 88087]}

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Snake coagglutinin alpha chain
species: Habu snake (Trimeresurus flavoviridis), flavocetin-A [TaxId: 88087]

Probab=99.90  E-value=4.2e-24  Score=182.64  Aligned_cols=128  Identities=17%  Similarity=0.263  Sum_probs=106.3

Q ss_pred             CCCcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcCC-CCCceeeecccCCCCcc
Q psy14885         27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDP-QRRKWYFGGTQQSPNLW  103 (483)
Q Consensus        27 ~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~~-~~~~~wig~~~~~~~~W  103 (483)
                      ..||+||+.|+++||+++..+ ++|.+|+..|++  .||+|++|+|.+|++||..++..... ....||||++...    
T Consensus         2 ~~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~~WiGl~~~~----   76 (135)
T d1c3aa_           2 FDCIPGWSAYDRYCYQAFSKP-KNWEDAESFCEEGVKTSHLVSIESSGEGDFVAQLVAEKIKTSFQYVWIGLRIQN----   76 (135)
T ss_dssp             CCCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCSHHHHHHHHHHHHHHCCSCCSEEEEEEEECC----
T ss_pred             CCCCCCCEeECCEEEEEECcc-cCHHHHHHHHhhccccccccccCCHHHHHHHHHhhhccccccccccceeeeecC----
Confidence            369999999999999999995 999999999986  49999999999999999999876532 3445677776432    


Q ss_pred             cccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885        104 VNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA  182 (483)
Q Consensus       104 ig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~  182 (483)
                                      ......|.|+||+++.+  ++|.+ +|     ++|+.+....+.+.|.+.+|+  ..++||||+
T Consensus        77 ----------------~~~~~~~~W~dgs~~~y--~nw~~~~p-----~~C~~~~~~~~~~~W~~~~C~--~~~~fICe~  131 (135)
T d1c3aa_          77 ----------------KEQQCRSEWSDASSVNY--ENLVKQFS-----KKCYALKKGTELRTWFNVYCG--TENPEVCKY  131 (135)
T ss_dssp             ----------------CSSSCCCBCTTSCBCCC--CCBCGGGC-----CCEEEEETTSCSCSBEEECTT--SCEEEEEEE
T ss_pred             ----------------CcccccccccccCcccc--cccCCCCC-----CCeEEEEecCCCCCEEccCCC--CCEeEEEEE
Confidence                            22356799999999876  78987 66     469999876666679999999  999999999


Q ss_pred             ch
Q psy14885        183 SI  184 (483)
Q Consensus       183 ~~  184 (483)
                      +|
T Consensus       132 ~P  133 (135)
T d1c3aa_         132 TP  133 (135)
T ss_dssp             CC
T ss_pred             CC
Confidence            86

>d1umra_ d.169.1.1 (A:) Snake coagglutinin alpha chain {South american rattlesnake (Crotalus durissus terrificus), convulxin [TaxId: 8732]}

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Snake coagglutinin alpha chain
species: South american rattlesnake (Crotalus durissus terrificus), convulxin [TaxId: 8732]

Probab=99.90  E-value=3.5e-24  Score=183.14  Aligned_cols=128  Identities=18%  Similarity=0.350  Sum_probs=105.4

Q ss_pred             CCCcccccccCCeEEEEecCCCCCHHHHHHHhhhc--CCcccccCCHhHHHHHHHHhhhcCC-CCCceeeecccCCCCcc
Q psy14885         27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSL--DSDLANVNDADEHGFIMYQLFWQDP-QRRKWYFGGTQQSPNLW  103 (483)
Q Consensus        27 ~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~--g~~L~~i~s~~e~~~l~~~~~~~~~-~~~~~wig~~~~~~~~W  103 (483)
                      ..||+||..|+++||+++..+ ++|.+|+..|+.+  ||+||+|+|.+|++||..++..... ....+|||+....    
T Consensus         2 ~~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~~~g~~La~i~s~~e~~fl~~~~~~~~~~~~~~~WiGl~~~~----   76 (135)
T d1umra_           2 LHCPSDWYYYDQHCYRIFNEE-MNWEDAEWFCTKQAKGAHLVSIKSAKEADFVAWMVTQNIEESFSHVSIGLRVQN----   76 (135)
T ss_dssp             CSSCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCSHHHHHHHHHHHHHHSCTTCCEEECSEEECC----
T ss_pred             CCCCCCCEEECCEEEEEECcc-cCHHHHHHHhhccCCCcceeeehhhhhhHHHHHHhhcccCCCCcceeeeeeeec----
Confidence            369999999999999999995 9999999999764  8999999999999999998876532 2345566654322    


Q ss_pred             cccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885        104 VNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA  182 (483)
Q Consensus       104 ig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~  182 (483)
                                      ....+.|.|+||+++.+  .+|.+ +|     ++|+.+....+...|.+.+|.  ..++||||+
T Consensus        77 ----------------~~~~~~~~W~dGs~~~y--~nw~~~~~-----~~C~~~~~~~~~~~W~~~~C~--~~~~fICe~  131 (135)
T d1umra_          77 ----------------KEKQCSTKWSDGSSVSY--DNLLDLYI-----TKCSLLKKETGFRKWFVASCI--GKIPFVCKF  131 (135)
T ss_dssp             ----------------SSSSSCCBCTTSCBCCC--CCBCGGGC-----CCEEEEEGGGTTCSBEEECTT--CCEEEEEEE
T ss_pred             ----------------ccccCccccccCCcccc--cccCCCCC-----CCEEEEEeeCCCCcEEecCCC--CCEeEEEeE
Confidence                            23467899999999876  78987 66     369999877666679999999  999999999


Q ss_pred             ch
Q psy14885        183 SI  184 (483)
Q Consensus       183 ~~  184 (483)
                      +|
T Consensus       132 pP  133 (135)
T d1umra_         132 PP  133 (135)
T ss_dssp             CC
T ss_pred             CC
Confidence            85

>d1dv8a_ d.169.1.1 (A:) H1 subunit of the asialoglycoprotein receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: H1 subunit of the asialoglycoprotein receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=8.5e-24  Score=178.88  Aligned_cols=120  Identities=27%  Similarity=0.501  Sum_probs=100.2

Q ss_pred             CcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccCc
Q psy14885         29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDD  108 (483)
Q Consensus        29 C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~~  108 (483)
                      ||+||+.|+++||+++..+ ++|.+|+..|+++||+||+|+|.+|++||..++.     ...+|||+++           
T Consensus         1 Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~~~~e~~~i~~~~~-----~~~~WiG~~~-----------   63 (128)
T d1dv8a_           1 CPVNWVEHERSCYWFSRSG-KAWADADNYCRLEDAHLVVVTSWEEQKFVQHHIG-----PVNTWMGLHD-----------   63 (128)
T ss_dssp             CCTTCEEETTEEEEECSSC-BCHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHC-----SSCEEEEEEC-----------
T ss_pred             CCCCCEEECCEEEEEECCc-cCHHHHHHHHhhcCCEEeeecccchhhhhhcccc-----ceeeeeeccc-----------
Confidence            9999999999999999995 9999999999999999999999999999999883     3345555543           


Q ss_pred             ccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcc------cCCeEEEecccccccccccccCCCCceeeeee
Q psy14885        109 PQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNV------QRDYLAYSFSQSLKRWGFERVTGMEPLLFICE  181 (483)
Q Consensus       109 ~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~------~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe  181 (483)
                                   ..+.|.|+||+.......+|++ +|++..      .++|+.+...   +.|.+.+|+  ..++||||
T Consensus        64 -------------~~~~~~W~dgs~~~~~~~~W~~~~P~~~~~~~~~~~~~C~~~~~~---~~w~~~~C~--~~~~fICe  125 (128)
T d1dv8a_          64 -------------QNGPWKWVDGTDYETGFKNWRPEQPDDWYGHGLGGGEDCAHFTDD---GRWNDDVCQ--RPYRWVCE  125 (128)
T ss_dssp             -------------TTSSCEETTCCCSTTSCCCBCTTCCCCCCTTSSSSCCCEEEECTT---SCEEEECTT--SCBEEEEE
T ss_pred             -------------cCCceEEeeccccCCcceeeccCCCCccccccCCCCcceEEECCC---CEEEeEcCC--CCEEEEEE
Confidence                         3467999999876543388999 997632      4679998643   359999999  99999999


Q ss_pred             cc
Q psy14885        182 AS  183 (483)
Q Consensus       182 ~~  183 (483)
                      ++
T Consensus       126 ~~  127 (128)
T d1dv8a_         126 TE  127 (128)
T ss_dssp             EE
T ss_pred             EE
Confidence            97

>d1fvua_ d.169.1.1 (A:) Snake coagglutinin alpha chain {Jararaca (Bothrops jararaca), botrocetin [TaxId: 8724]}

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Snake coagglutinin alpha chain
species: Jararaca (Bothrops jararaca), botrocetin [TaxId: 8724]

Probab=99.89  E-value=7.3e-24  Score=180.56  Aligned_cols=127  Identities=16%  Similarity=0.303  Sum_probs=103.4

Q ss_pred             CcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCC-HhHHHHHHHHhhhc-CCCCCceeeecccCCCCccc
Q psy14885         29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVND-ADEHGFIMYQLFWQ-DPQRRKWYFGGTQQSPNLWV  104 (483)
Q Consensus        29 C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s-~~e~~~l~~~~~~~-~~~~~~~wig~~~~~~~~Wi  104 (483)
                      ||+||+.|+++||+++... ++|.+|+..|+.  .||+||+|++ ++|+.||..++... ......||||++...     
T Consensus         2 Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~~~~e~~~~~~~~~~~~~~~~~~~~WIGl~~~~-----   75 (133)
T d1fvua_           2 CPSGWSSYEGNCYKFFQQK-MNWADAERFCSEQAKGGHLVSIKIYSKEKDFVGDLVTKNIQSSDLYAWIGLRVEN-----   75 (133)
T ss_dssp             CCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCTTSTHHHHHHHHHHHHCCSSCCEEEEEEEECC-----
T ss_pred             CCCCCEEECCEEEEEECcc-cCHHHHHHHHhhccccccccccCCHHHHHHHHHhhhhccccCccccceEEEeecc-----
Confidence            9999999999999999995 999999999985  5899999975 56788888877654 223456677776432     


Q ss_pred             ccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885        105 NEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS  183 (483)
Q Consensus       105 g~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~  183 (483)
                                     ....+.|.|+||+++.+  .+|.+ +|+     +|+.+....+...|.+.+|.  ..++||||++
T Consensus        76 ---------------~~~~~~w~W~dGs~~~y--~~w~~~~p~-----~C~~~~~~~~~~~W~~~~C~--~~~~fICe~~  131 (133)
T d1fvua_          76 ---------------KEKQCSSEWSDGSSVSY--ENVVERTVK-----KCFALEKDLGFVLWINLYCA--QKNPFVCKSP  131 (133)
T ss_dssp             ---------------SSSSSCCBCTTSCBCCC--CCBCGGGCC-----CEEEEETTTTSCSEEEECTT--CCEEEEEEEC
T ss_pred             ---------------cccccccccccCCcccc--cccCCCCCC-----CeEEEEecCCCCeEEccCCC--CCEEEEEEEC
Confidence                           22456799999999876  78998 774     69999876665679999999  9999999998


Q ss_pred             hh
Q psy14885        184 IQ  185 (483)
Q Consensus       184 ~~  185 (483)
                      ||
T Consensus       132 Pp  133 (133)
T d1fvua_         132 PP  133 (133)
T ss_dssp             CC
T ss_pred             cC
Confidence            64

>d1mu2a1 c.55.3.1 (A:430-555) HIV RNase H (Domain of reverse transcriptase) {Human immunodeficiency virus type 2 [TaxId: 11709]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Ribonuclease H-like
family: Ribonuclease H
domain: HIV RNase H (Domain of reverse transcriptase)
species: Human immunodeficiency virus type 2 [TaxId: 11709]

Probab=99.89  E-value=8.8e-24  Score=178.26  Aligned_cols=114  Identities=18%  Similarity=0.232  Sum_probs=88.2

Q ss_pred             ceEe-eCCCCC--CCceEEEEEeCCCEEEeCCCCCcchHHHHHHHHHHHHHhHhcCCceEEEEeccHHHHHhhcccCCc-
Q psy14885        221 DVVF-DLSKRN--SNTGFAFIINNENFQYRLPHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGIDNIQQR-  296 (483)
Q Consensus       221 ~~~~-DgS~~~--~~~G~g~~~~~~~~~~~l~~~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs~~~~~~l~~~~~~-  296 (483)
                      .++| |||+..  +..|+|+++......+...+..||++|||.||++||+.    ...++.|+|||++|++.+.+.+.. 
T Consensus         8 ~t~YTDGS~~~n~~~~~~g~~~~~~~~~~~~~~~~tnn~AEl~Ai~~al~~----~~~~i~I~tDS~~v~~~~~~~~~~~   83 (126)
T d1mu2a1           8 ETFYTDGSCNRQSKEGKAGYVTDRGKDKVKKLEQTTNQQAELEAFAMALTD----SGPKVNIIVDSQYVMGIVASQPTES   83 (126)
T ss_dssp             EEEEEEEEECTTTCCEEEEEEETTSCEEEEEESSCCHHHHHHHHHHHHHHT----SCSEEEEEESCHHHHHHHHTCCSEE
T ss_pred             cEEEEcCCCCCCCCcEEEEEEecCCCEEEEecCCCcchHHHHHHHHHHhcc----CCcceEEEechHHHHHHHhcCCccc
Confidence            3566 999765  66778888877655444445689999999999999985    357899999999999999986553 


Q ss_pred             -chHHHHHHHHHHHHhhCCCceEEEEeccCCCCcchHHHhHHHHhhh
Q psy14885        297 -NNIIQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAKNSI  342 (483)
Q Consensus       297 -~~~~~~i~~~~~~~~~~~~~v~~~WvpgH~g~~gNe~AD~lAk~a~  342 (483)
                       +....   +.+..+. +...|.|.|||||+|++|||.||+||++|+
T Consensus        84 ~~~~~~---~~~~~~~-~~~~v~~~wV~gH~g~~gNe~AD~LA~~ai  126 (126)
T d1mu2a1          84 ESKIVN---QIIEEMI-KKEAIYVAWVPAHKGIGGNQEVDHLVSQGI  126 (126)
T ss_dssp             SCHHHH---HHHHHHH-HCSEEEEEECCSSSCCTTHHHHHHHHHTTC
T ss_pred             cchHHH---HHHHHhh-hcceeEEEEEeCCCCCcchHHHHHHHHhhC
Confidence             23222   2233333 356899999999999999999999999874

>d1t8da1 d.169.1.1 (A:1-143) Low affinity immunoglobulin epsilon Fc receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Low affinity immunoglobulin epsilon Fc receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.9e-23  Score=180.22  Aligned_cols=124  Identities=19%  Similarity=0.459  Sum_probs=104.3

Q ss_pred             cCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885         26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN  105 (483)
Q Consensus        26 ~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig  105 (483)
                      +.+||+||+.|+++||+++..+ ++|.+|+..|+.+||+||+|+|.+|++||..++.     ...+|||+++..      
T Consensus         5 c~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~gg~La~i~s~~e~~~l~~~~~-----~~~~wiGl~~~~------   72 (143)
T d1t8da1           5 CNTCPEKWINFQRKCYYFGKGT-KQWVHARYACDDMEGQLVSIHSPEEQDFLTKHAS-----HTGSWIGLRNLD------   72 (143)
T ss_dssp             SCCCCSSSEECSSEEEEEEECC-SSHHHHHHHHHHHTSBCCCCCSHHHHHHHHHHCS-----SSCEEEEEEESS------
T ss_pred             CCCCCcccEEECCEEEEEECcc-cCHHHHHHHhhhcCCEEeeecCHHHhhhcccccc-----cccccccceecC------
Confidence            6789999999999999999995 9999999999999999999999999999998763     334566655432      


Q ss_pred             cCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcc-cCCeEEEecccccccccccccCCCCc-eeeeeec
Q psy14885        106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNV-QRDYLAYSFSQSLKRWGFERVTGMEP-LLFICEA  182 (483)
Q Consensus       106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~-~~~Cv~~~~~~~~~~W~~~~C~~~~~-~~fvCe~  182 (483)
                                      .++.|.|.||++..+  .+|.+ +|+... +++|+.+...   +.|++.+|+  .. .+|||||
T Consensus        73 ----------------~~~~~~w~dg~~~~~--~~w~~~~P~~~~~~~~Cv~~~~~---g~W~~~~C~--~~~~~fICek  129 (143)
T d1t8da1          73 ----------------LKGEFIWVDGSHVDY--SNWAPGEPTSRSQGEDCVMMRGS---GRWNDAFCD--RKLGAWVCDR  129 (143)
T ss_dssp             ----------------SSSCEEETTSCBCSS--CCBSSSCCCSCCSCCSEEEEETT---TEEEEECSC--SCCCEEEEEE
T ss_pred             ----------------CCCccEeCCCCcccc--ccccccCCCCCCCCCCEEEEcCC---CEEEeeCCC--CCccCeEEEE
Confidence                            567899999999876  88999 998654 5689999653   369999998  66 6899999


Q ss_pred             ch
Q psy14885        183 SI  184 (483)
Q Consensus       183 ~~  184 (483)
                      ++
T Consensus       130 ~~  131 (143)
T d1t8da1         130 LA  131 (143)
T ss_dssp             EC
T ss_pred             CC
Confidence            85

>d1ypqa1 d.169.1.1 (A:140-270) Oxidised low density lipoprotein {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Oxidised low density lipoprotein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.7e-23  Score=177.52  Aligned_cols=126  Identities=19%  Similarity=0.339  Sum_probs=101.6

Q ss_pred             cCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885         26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN  105 (483)
Q Consensus        26 ~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig  105 (483)
                      ..+||+||+.|+++||+++... ++|.+|+..|+++||+||+|+|++|++||..++...   ...||||+++..      
T Consensus         2 ~~~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~---~~~~WiGl~~~~------   71 (131)
T d1ypqa1           2 SAPCPQDWIWHGENCYLFSSGS-FNWEKSQEKCLSLDAKLLKINSTADLDFIQQAISYS---SFPFWMGLSRRN------   71 (131)
T ss_dssp             CCSSCTTSEEETTEEEEECSSC-BCHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHTTC---CCCEEEEEEESS------
T ss_pred             cCCCCCCCEEECCEEEEEECCc-cCHHHHHHHHHHcCCeeccchhhhhhhhhhhhhhcc---CCceEEEEEecC------
Confidence            3689999999999999999994 999999999999999999999999999999888542   345677766433      


Q ss_pred             cCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCC-cccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885        106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPAD-NVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS  183 (483)
Q Consensus       106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~-~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~  183 (483)
                                      .++.|.|+||+++.+. ..|.. .|+. ...++|+.+..    +.|.+.+|+  ..++|||||+
T Consensus        72 ----------------~~~~w~w~dg~~~~~~-~~~~~~~~~~~~~~~~C~~~~~----~~w~~~~C~--~~~~~ICek~  128 (131)
T d1ypqa1          72 ----------------PSYPWLWEDGSPLMPH-LFRVRGAVSQTYPSGTCAYIQR----GAVYAENCI--LAAFSICQKK  128 (131)
T ss_dssp             ----------------TTSCCEETTSCBCCTT-SCCEEESCSCCCTTCEEEEEET----TEEEEEETT--SCBEEEEEEE
T ss_pred             ----------------CCCceEeCCCCCcccc-ccccCCCCCCCCCCCCEEEEEC----CeEEEeCCC--CCEeEEEeEE
Confidence                            5688999999988763 22333 4433 33678999853    359999999  9999999997


Q ss_pred             h
Q psy14885        184 I  184 (483)
Q Consensus       184 ~  184 (483)
                      .
T Consensus       129 a  129 (131)
T d1ypqa1         129 A  129 (131)
T ss_dssp             C
T ss_pred             C
Confidence            4

>d1e87a_ d.169.1.1 (A:) CD69 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: CD69
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=2e-23  Score=173.73  Aligned_cols=114  Identities=16%  Similarity=0.378  Sum_probs=96.5

Q ss_pred             CCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccccc
Q psy14885         27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNE  106 (483)
Q Consensus        27 ~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~  106 (483)
                      .+||+||+.|+++||+++... ++|.+|+..|+.+||+|++|++++|++||..++.     ...||||+++.        
T Consensus         1 ssCp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~-----~~~~WiGl~~~--------   66 (117)
T d1e87a_           1 SSCSEDWVGYQRKCYFISTVK-RSWTSAQNACSEHGATLAVIDSEKDMNFLKRYAG-----REEHWVGLKKE--------   66 (117)
T ss_dssp             CCSCTTSEEETTEEEEECSSC-BCHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHC-----SSCEEEEEECC--------
T ss_pred             CCCCCCCEEECCEEEEEECcc-cCHHHHHHHHhhcCCEEeeecCHHHHHHHhhhhc-----cceeecccccc--------
Confidence            369999999999999999995 9999999999999999999999999999999873     34577777643        


Q ss_pred             CcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885        107 DDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS  183 (483)
Q Consensus       107 ~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~  183 (483)
                                     ..+.|.|+||+++    .+|.+ .|    +++|+++..    +.|.+.+|.  ..++||||||
T Consensus        67 ---------------~~~~w~w~dg~~~----~~w~~~~~----~~~C~~l~~----~~w~~~~C~--~~~~~ICekp  115 (117)
T d1e87a_          67 ---------------PGHPWKWSNGKEF----NNWFNVTG----SDKCVFLKN----TEVSSMECE--KNLYWICNKP  115 (117)
T ss_dssp             ---------------TTSCCEETTSCBC----CCSSCCBS----SCSEEEEET----TEEEEECTT--SCBEEEEEEE
T ss_pred             ---------------ccCccEeCCCCcc----cCccCCCC----CCcEEEEEC----CEEEEecCC--CCEEEEEEEe
Confidence                           2467999999864    56876 44    368999953    259999999  9999999998

>d1egga_ d.169.1.1 (A:) Macrophage mannose receptor, CRD4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Macrophage mannose receptor, CRD4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.8e-23  Score=178.70  Aligned_cols=128  Identities=19%  Similarity=0.327  Sum_probs=103.2

Q ss_pred             Cccccccc--CCeEEEEecCC---CCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcc
Q psy14885         29 CPQHWVQY--RDSCYRFVKSP---LKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLW  103 (483)
Q Consensus        29 C~~gw~~~--~~~Cy~~~~~~---~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~W  103 (483)
                      ||+||..+  ++.||+++...   .++|.+|+..|++.||+||+|+|.+|++||..++.........+|||++...    
T Consensus         1 Cp~gW~~~~~~~~CY~~~~~~~~~~~~w~~A~~~C~~~gg~L~~i~s~~e~~~i~~~l~~~~~~~~~~wiG~~~~~----   76 (136)
T d1egga_           1 CPEDWGASSRTSLCFKLYAKGKHEKKTWFESRDFCRALGGDLASINNKEEQQTIWRLITASGSYHKLFWLGLTYGS----   76 (136)
T ss_dssp             CCTTCEECSSSSCEEEEECSCGGGCBCHHHHHHHHHTTTCEECCCCSHHHHHHHHHHHHHHTCTTCEEEEEEECC-----
T ss_pred             CCCCCeeCCCCCEEEEEEecCCCcccCHHHHHHHHHHCCCEEeEEecchhhhhhhhhccccccccccccccccccc----
Confidence            99999655  47899986321   4799999999999999999999999999999999877555566677776433    


Q ss_pred             cccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcc-cCCeEEEecccccccccccccCCCCceeeeee
Q psy14885        104 VNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNV-QRDYLAYSFSQSLKRWGFERVTGMEPLLFICE  181 (483)
Q Consensus       104 ig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~-~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe  181 (483)
                                        ..+.|.|+||+++.+  ++|.+ +|++.. .++|+.+..... ..|.+.+|+  ..++||||
T Consensus        77 ------------------~~~~~~W~dg~~~~y--~~W~~g~P~~~~~~~~C~~~~~~~~-~~W~~~~C~--~~~~fICe  133 (136)
T d1egga_          77 ------------------PSEGFTWSDGSPVSY--ENWAYGEPNNYQNVEYCGELKGDPT-MSWNDINCE--HLNNWICQ  133 (136)
T ss_dssp             ---------------------CCCCTTSCCCCC--CCCCTTCSCGGGSCCEEEEEECSTT-CCEEEEETT--SCBEEEEE
T ss_pred             ------------------cceeeeeecCCccee--ecccCCCCCCCCCCcceEEEEcCCC-CeEEecCCC--CcEeEEEE
Confidence                              467899999999876  89999 998654 567999976543 469999999  99999999


Q ss_pred             cc
Q psy14885        182 AS  183 (483)
Q Consensus       182 ~~  183 (483)
                      .+
T Consensus       134 ~~  135 (136)
T d1egga_         134 IQ  135 (136)
T ss_dssp             CC
T ss_pred             Ee
Confidence            86

>d1v7pb_ d.169.1.1 (B:) Snake coagglutinin beta chain {Snake (Echis multisquamatus), Ems16 [TaxId: 93050]}

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Snake coagglutinin beta chain
species: Snake (Echis multisquamatus), Ems16 [TaxId: 93050]

Probab=99.89  E-value=1.2e-23  Score=177.81  Aligned_cols=122  Identities=16%  Similarity=0.313  Sum_probs=102.0

Q ss_pred             CcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccccc
Q psy14885         29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNE  106 (483)
Q Consensus        29 C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~  106 (483)
                      ||+||+.|+++||+++... ++|.+|+..|+.  .||+||+|+|++|++||..++.... ....||||+++..       
T Consensus         1 Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~-~~~~~WiGl~~~~-------   71 (127)
T d1v7pb_           1 CPLGWSSFDQHCYKVFEPV-KNWTEAEEICMQQHKGSRLASIHSSEEEAFVSKLASKAL-KFTSMWIGLNNPW-------   71 (127)
T ss_dssp             CCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCSHHHHHHHHHHHHHHC-SSCEEEEEEECTT-------
T ss_pred             CCCCCEeeCCEEEEEECcc-cCHHHHHHhhcccCCCCcccchhhhhhhhhhceeecccc-cceeEEeeeeccC-------
Confidence            9999999999999999995 999999999965  5799999999999999999886542 2345677665432       


Q ss_pred             CcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeecch
Q psy14885        107 DDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASI  184 (483)
Q Consensus       107 ~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~~  184 (483)
                                     .++.|.|+||+++.+  ++|.+      +++|+.+....+...|.+.+|+  ..++||||+++
T Consensus        72 ---------------~~~~w~W~dg~~~~y--~~W~~------~~~c~~~~~~~~~~~W~~~~C~--~~~~fiCe~~~  124 (127)
T d1v7pb_          72 ---------------KDCKWEWSDNARFDY--KAWKR------RPYCTVMVVKPDRIFWFTRGCE--KSVSFVCKFLT  124 (127)
T ss_dssp             ---------------TTCCCEETTCCCCCC--CCBCC------CCEEEEEEECSSCEEEEEEETT--SCEEEEEEEEC
T ss_pred             ---------------ccceeEecCCCcccc--cccCC------CCCcEEEEEECCCCeEEecCCC--CCEEEEEEEcC
Confidence                           568899999999876  78964      3569988877666679999999  99999999975

>d1j34a_ d.169.1.1 (A:) Snake coagglutinin alpha chain {Habu snake (Trimeresurus flavoviridis) [TaxId: 88087]}

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Snake coagglutinin alpha chain
species: Habu snake (Trimeresurus flavoviridis) [TaxId: 88087]

Probab=99.89  E-value=1.5e-23  Score=177.61  Aligned_cols=124  Identities=22%  Similarity=0.385  Sum_probs=103.1

Q ss_pred             CcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcC-CCCCceeeecccCCCCcccc
Q psy14885         29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQD-PQRRKWYFGGTQQSPNLWVN  105 (483)
Q Consensus        29 C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~-~~~~~~wig~~~~~~~~Wig  105 (483)
                      ||+||+.|+++||+++..+ ++|.+|+..|+.  .||+|++|++++|++||..++.... .....||||++...      
T Consensus         2 Cp~gw~~~~~~CY~~~~~~-~~~~~A~~~C~~~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~~WIGl~~~~------   74 (129)
T d1j34a_           2 CPSGWSSYEGHCYKPFKLY-KTWDDAERFCTEQAKGGHLVSIESAGEADFVAQLVTENIQNTKSYVWIGLRVQG------   74 (129)
T ss_dssp             CCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCSHHHHHHHHHHHHHHCCCTTCCEEEEEEECS------
T ss_pred             CCCcCEeeCCEEEEEECcc-cCHHHHHHhhhhccCCccccccCCHHHHHHHHhhhccccccccceEEeeeeccc------
Confidence            9999999999999999995 999999999965  6999999999999999999887653 23455777776432      


Q ss_pred             cCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885        106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA  182 (483)
Q Consensus       106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~  182 (483)
                                    ......|+|+||+++.+  ++|.+ +|+     +|+.+....+...|.+.+|.  ..++||||.
T Consensus        75 --------------~~~~~~~~W~dgs~~~y--~~W~~~ep~-----~c~~~~~~~~~~~W~~~~C~--~~~~fICea  129 (129)
T d1j34a_          75 --------------KEKQCSSEWSDGSSVSY--ENWIEAESK-----TCLGLEKETGFRKWVNIYCG--QQNPFVCEA  129 (129)
T ss_dssp             --------------SCSCSCCBCTTSCBCCC--CCBCGGGSC-----CEEEECGGGTTCSBEEECTT--SCEEEEEEC
T ss_pred             --------------cccccceecCCCCcccc--cccCCCCCC-----cEEEEEccCCCCCEEecCCC--CCcceEecC
Confidence                          12345799999999876  88999 885     59999776665679999999  999999984

>d1oz7a_ d.169.1.1 (A:) Snake coagglutinin alpha chain {Saw-scaled viper (Echis carinatus), echicetin [TaxId: 40353]}

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Snake coagglutinin alpha chain
species: Saw-scaled viper (Echis carinatus), echicetin [TaxId: 40353]

Probab=99.89  E-value=1.4e-23  Score=178.36  Aligned_cols=128  Identities=17%  Similarity=0.295  Sum_probs=103.7

Q ss_pred             CCcccccccCCeEEEEecCCCCCHHHHHHHhhhcC--CcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885         28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLD--SDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN  105 (483)
Q Consensus        28 ~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g--~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig  105 (483)
                      .||+||+.|+++||+++..+ ++|.+|+..|+++|  |+|++|+|.+|++||..++.........||||+++..      
T Consensus         1 ~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~g~L~~i~s~~e~~fi~~~~~~~~~~~~~~WIGl~~~~------   73 (131)
T d1oz7a_           1 MCPPGWSSNGVYCYMLFKEP-KTWDEAEKFCNKQGKDGHLLSIESKKEEILVDIVVSENIGKMYKIWTGLSERS------   73 (131)
T ss_dssp             CCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCSHHHHHHHHHHHHHHSCCCSEEEEEEEECC------
T ss_pred             CCCCCCEEECCEEEEEECcc-cCHHHHHhhhhccCCCccccccCCHHHhhhhhhheecccCCCccEEEEEEecC------
Confidence            39999999999999999995 99999999999976  8999999999999999999877666677888887533      


Q ss_pred             cCcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeecchh
Q psy14885        106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASIQ  185 (483)
Q Consensus       106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~~~  185 (483)
                                    ......|+|+||+.+.+    |.+  .. +.++|+.+....+...|++.+|+  ..++||||++.+
T Consensus        74 --------------~~~~~~~~W~dgs~~~~----~~~--~~-~~~~C~~~~~~~~~~~W~~~~C~--~~~~fICe~~~p  130 (131)
T d1oz7a_          74 --------------KEQHCSSRWSDGSFFRS----YEI--AI-RYSECFVLEKQSVFRTWVATPCE--NTFPFMCKYPVP  130 (131)
T ss_dssp             --------------CGGGSCCBCSSSBCCSC----CCC--CC-SCCCEEEEEGGGTTCSEEEECTT--SCEEEEEEECTT
T ss_pred             --------------cccccccccCCCCcccC----Ccc--CC-CCCCEEEEEecCCCCcEEecCCC--CCEeEEEeEeCC
Confidence                          11234688999987643    322  21 24689999877666679999999  999999999854

>d1hq8a_ d.169.1.1 (A:) NK cell-activating receptor nkg2d {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: NK cell-activating receptor nkg2d
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.89  E-value=4.5e-24  Score=179.45  Aligned_cols=118  Identities=25%  Similarity=0.437  Sum_probs=99.9

Q ss_pred             cCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885         26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN  105 (483)
Q Consensus        26 ~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig  105 (483)
                      +++||+||+.|+++||+++..+ ++|.+|+..|+++||+||+|+|++|++||..+       ...||||+++..      
T Consensus         3 c~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~gg~La~i~s~~e~~fl~~~-------~~~~WiGl~~~~------   68 (123)
T d1hq8a_           3 CGPCPNNWICHRNNCYQFFNEE-KTWNQSQASCLSQNSSLLKIYSKEEQDFLKLV-------KSYHWMGLVQIP------   68 (123)
T ss_dssp             CCCCSTTCEEETTEEEEEEEEE-ECHHHHHHHHHTTTCEECCCSCTTTTGGGGGC-------CSCEEEEEEECT------
T ss_pred             CCCCCccCEEECCEEEEEECcc-cCHHHHHHHHhhccCccceEehHHHHHHHhhh-------hhceeeeeeecC------
Confidence            5789999999999999999995 99999999999999999999999999998542       234566665432      


Q ss_pred             cCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885        106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS  183 (483)
Q Consensus       106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~  183 (483)
                                      .++.|.|+||+++.+  .+|.+ +|.+   .+|+.+...   ..|.+.+|+  ..++|||||+
T Consensus        69 ----------------~~~~w~W~dgs~~~~--~~w~~~~~~~---~~c~~~~~~---~~w~~~~C~--~~~~~ICek~  121 (123)
T d1hq8a_          69 ----------------ANGSWQWEDGSSLSY--NQLTLVEIPK---GSCAVYGSS---FKAYTEDCA--NLNTYICMKR  121 (123)
T ss_dssp             ----------------TTCCEEETTSCBCCT--TTCEEECCTT---CCEEEECST---TEEEEECTT--SCEEEEEEEC
T ss_pred             ----------------CCCceEECCCCcccc--cccCCCCCCC---CCEEEEECC---CeEEEeCCC--CCEeEEEEEc
Confidence                            578899999999876  78999 8864   689988543   359999999  9999999997

>d1oz7b_ d.169.1.1 (B:) Snake coagglutinin beta chain {Saw-scaled viper (Echis carinatus), echicetin [TaxId: 40353]}

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Snake coagglutinin beta chain
species: Saw-scaled viper (Echis carinatus), echicetin [TaxId: 40353]

Probab=99.89  E-value=1.1e-23  Score=176.90  Aligned_cols=119  Identities=23%  Similarity=0.435  Sum_probs=99.0

Q ss_pred             CcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccccc
Q psy14885         29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNE  106 (483)
Q Consensus        29 C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~  106 (483)
                      ||+||+.|+++||+++... ++|.+|+..|+.  .||+|++|+|.+|++||..++.... ....||||+++..       
T Consensus         2 Cp~gw~~~~~~CY~~~~~~-~~~~~A~~~C~~~~~gg~L~~i~s~~e~~~l~~~~~~~~-~~~~~WIGl~~~~-------   72 (123)
T d1oz7b_           2 CLPDWSVYEGYCYKVFKER-MNWADAEKFCTKQHKDGHLVSFRNSKEVDFVISLAFPML-KNDLVWIGLTDYW-------   72 (123)
T ss_dssp             CCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCCSSHHHHHHHTSSTTT-TCSEEEEEEECCC-------
T ss_pred             CCccCEeECCEEEEEeCcc-cCHHHHHHHHhhccCCCcccccCCHHHhhhceeeeeecc-cceeEEEEeeccC-------
Confidence            9999999999999999995 999999999975  4899999999999999999876542 2345666665432       


Q ss_pred             CcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885        107 DDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS  183 (483)
Q Consensus       107 ~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~  183 (483)
                                     .++.|+|+||+++.+  ++|.+      +++|+.+....+  +|.+.+|+  ..++||||+|
T Consensus        73 ---------------~~~~~~W~dg~~~~y--~nW~~------~~~C~~~~~~~~--~W~~~~C~--~~~~fICe~P  122 (123)
T d1oz7b_          73 ---------------RDCNWEWSDGAQLDY--KAWDN------ERHCFIYKNTDN--QWTRRDCT--WTFSFVCKCP  122 (123)
T ss_dssp             ---------------CGGGEEETTCCCCCS--CCBCS------STTEEEEEGGGT--EEEEECTT--SCEEEEEEEE
T ss_pred             ---------------cccceeccCCCEeec--cccCC------CCCEEEEECCCC--EEEeeCCC--CcEEEEEEEc
Confidence                           567899999999976  78964      467999976543  59999999  9999999997

>d1sb2b1 d.169.1.1 (B:2-128) Snake coagglutinin beta chain {Malayan pit viper (Calloselasma rhodostoma), rhodocetin [TaxId: 8717]}

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Snake coagglutinin beta chain
species: Malayan pit viper (Calloselasma rhodostoma), rhodocetin [TaxId: 8717]

Probab=99.89  E-value=1.9e-23  Score=176.51  Aligned_cols=121  Identities=20%  Similarity=0.348  Sum_probs=98.3

Q ss_pred             CCcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcC-CCCCceeeecccCCCCccc
Q psy14885         28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQD-PQRRKWYFGGTQQSPNLWV  104 (483)
Q Consensus        28 ~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~-~~~~~~wig~~~~~~~~Wi  104 (483)
                      .||+||+.|+++||+++..+ ++|.+|+..|+.  .||+||+|+|.+|++||..++.... .....           +||
T Consensus         2 ~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~~~gg~La~i~s~~e~~fl~~~~~~~~~~~~~~-----------~Wi   69 (127)
T d1sb2b1           2 RCPTTWSASKLYCYKPFKEK-KTWIEAERFCAKQAENGHLVSIGSAAEADFLDLVIVVNFDKQRYR-----------AWT   69 (127)
T ss_dssp             CCCTTCEECSSEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCSHHHHHHHHHHHHHHC---CCC-----------EEE
T ss_pred             cCCCCCeecCCEEEEEECee-cCHHHHHHHHHhhcCCcccccccCHHHHHHHHHHHhhhccccccc-----------eee
Confidence            69999999999999999995 999999999976  4899999999999999999886542 12233           455


Q ss_pred             ccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885        105 NEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS  183 (483)
Q Consensus       105 g~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~  183 (483)
                      |+++               +.|.|+||+++.+  ++|.+ +|     ++|+.+....+.+.|.+.+|+  ..++||||+|
T Consensus        70 Gl~~---------------~~~~W~dGs~~~y--~nw~~~~~-----~~c~~~~~~~~~~~W~~~~C~--~~~~fICe~P  125 (127)
T d1sb2b1          70 GLTE---------------RNLKWTNGASVSY--ENLYEPYI-----RKCFVVQPWEGKSKWYKADCE--EKNAFLCKFP  125 (127)
T ss_dssp             EEEE---------------CCCBCTTSCBCCS--CCBSSCCC-----CCEEEEEEETTEEEEEEECTT--SCEEEEEEEE
T ss_pred             eecc---------------cceeecccCCccc--cccCCCCC-----cceeEEEEeCCCCCEEecCCC--CCEEEEEEEc
Confidence            5433               3589999999876  78875 43     479888766555679999999  9999999997


Q ss_pred             h
Q psy14885        184 I  184 (483)
Q Consensus       184 ~  184 (483)
                      .
T Consensus       126 k  126 (127)
T d1sb2b1         126 K  126 (127)
T ss_dssp             C
T ss_pred             C
Confidence            4

>d1jwia_ d.169.1.1 (A:) Snake coagglutinin alpha chain {Puff adder (Bitis arietans), bitiscetin [TaxId: 8692]}

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Snake coagglutinin alpha chain
species: Puff adder (Bitis arietans), bitiscetin [TaxId: 8692]

Probab=99.88  E-value=2.9e-23  Score=174.46  Aligned_cols=122  Identities=20%  Similarity=0.331  Sum_probs=99.9

Q ss_pred             CcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcC-CCCCceeeecccCCCCcccccC
Q psy14885         29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQD-PQRRKWYFGGTQQSPNLWVNED  107 (483)
Q Consensus        29 C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~-~~~~~~wig~~~~~~~~Wig~~  107 (483)
                      ||+||+.|+++||+++..+ ++|.+|+..|+++||+||+|+|.+|++||..++.... .....||||+++..        
T Consensus         1 Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~i~~~~~~~~~~~~~~~WiGl~~~~--------   71 (124)
T d1jwia_           1 CLPDWSSYKGHCYKVFKKV-GTWEDAEKFCVENSGHLASIDSKEEADFVTKLASQTLTKFVYDAWIGLRDES--------   71 (124)
T ss_dssp             CCTTSEEETTEEEEEEEEE-ECHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHHHHC--CCSCEEEEEEECC--------
T ss_pred             CCCCCEeeCCEEEEEECcc-cCHHHHHHHHHhcCCeeeeeehHHHHHHHHHHHhccccccccceeeEeeecc--------
Confidence            9999999999999999995 9999999999999999999999999999999887653 23445777776433        


Q ss_pred             cccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeee
Q psy14885        108 DPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICE  181 (483)
Q Consensus       108 ~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe  181 (483)
                                  ....+.|.|.||+++.+  .+|. +|+     +|+.+......+.|.+.+|+  ..++||||
T Consensus        72 ------------~~~~~~~~W~dgs~~~y--~n~~-~p~-----~c~~~~~~~~~~~W~~~~C~--~~~~fICe  123 (124)
T d1jwia_          72 ------------KTQQCSPQWTDGSSVVY--ENVD-EPT-----KCFGLDVHTEYRTWTDLPCG--EKNPFICK  123 (124)
T ss_dssp             ------------SSSSSCSBCTTSCBCCS--CCBS-SCC-----CEEEECGGGTTSSEEEECTT--SCEEEEEE
T ss_pred             ------------CCCccceecCCCCcccc--cCCC-CCC-----ccEEEEEecCCCCEEccCCC--CCEeeEeC
Confidence                        22456799999999865  4553 553     68888766555679999999  99999998

>d3bdwa1 d.169.1.1 (A:59-179) CD94 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: CD94
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=8.3e-24  Score=177.22  Aligned_cols=118  Identities=25%  Similarity=0.501  Sum_probs=99.7

Q ss_pred             CCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccC
Q psy14885         28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNED  107 (483)
Q Consensus        28 ~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~  107 (483)
                      +||+||+.|+++||+++... ++|.+|+..|+++||+|+.|++++|++||..       ....||||+++..        
T Consensus         2 ~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~~~~fl~~-------~~~~~WiGl~~~~--------   65 (121)
T d3bdwa1           2 SCQEKWVGYRCNCYFISSEQ-KTWNESRHLCASQKSSLLQLQNTDELDFMSS-------SQQFYWIGLSYSE--------   65 (121)
T ss_dssp             CCTTTCEEETTEEEEECSSC-BCHHHHHHHHHHTTCEECCCSCGGGGGGGTT-------CCCCEECSEEEET--------
T ss_pred             cCCCCcEEECCEEEEEEccc-cCHHHHHHHHhhcCCcccceeeeeeeeEeee-------cccceEEEEeecC--------
Confidence            59999999999999999995 9999999999999999999999999998753       3345666665422        


Q ss_pred             cccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecch
Q psy14885        108 DPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASI  184 (483)
Q Consensus       108 ~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~~  184 (483)
                                    .++.|.|+||+++.+  .+|.+ +|++  .++|+++...   +.|.+.+|+  ..++|||||+.
T Consensus        66 --------------~~~~w~w~dg~~~~~--~~w~~~~~~~--~~~C~~~~~~---g~w~~~~C~--~~~~fICek~l  120 (121)
T d3bdwa1          66 --------------EHTAWLWENGSALSQ--YLFPSFETFN--TKNCIAYNPN---GNALDESCE--DKNRYICKQQL  120 (121)
T ss_dssp             --------------TTTEEEETTSCBCCT--TTSGGGGGCC--TTSEEEEETT---TEEEEECTT--SCBEEEEEECC
T ss_pred             --------------ccceeEeCCCCcccc--cccCCCCCCC--CCCEEEEECC---CEEEeeCCC--CCEEEEEeEEc
Confidence                          568899999999876  77988 8876  5789998654   359999999  99999999973

>d1sb2a1 d.169.1.1 (A:1-132) Snake coagglutinin alpha chain {Malayan pit viper (Calloselasma rhodostoma), rhodocetin [TaxId: 8717]}

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Snake coagglutinin alpha chain
species: Malayan pit viper (Calloselasma rhodostoma), rhodocetin [TaxId: 8717]

Probab=99.88  E-value=2e-23  Score=177.60  Aligned_cols=127  Identities=18%  Similarity=0.356  Sum_probs=104.5

Q ss_pred             CcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcC-CCCCceeeecccCCCCcccc
Q psy14885         29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQD-PQRRKWYFGGTQQSPNLWVN  105 (483)
Q Consensus        29 C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~-~~~~~~wig~~~~~~~~Wig  105 (483)
                      ||+||+.|++.||+++..+ ++|.+|+..|+.  .||+|++|+|++|++||..++.... .....+|||++...      
T Consensus         2 Cp~gw~~~~~~CY~~~~~~-~~~~~A~~~C~~~~~g~~L~~i~s~~e~~~i~~~~~~~~~~~~~~~WiGl~~~~------   74 (132)
T d1sb2a1           2 CPDGWSSTKSYCYRPFKEK-KTWEEAERFCTEQEKEAHLVSMENRLEAVFVDMVMENNFENKIYRSWIGLKIEN------   74 (132)
T ss_dssp             CCTTCEECSSEEEEEEEEE-ECHHHHHHHHHTSSSCCEECCCSSHHHHHHHHHHHHHHTTTCCEEEEEEEEEEC------
T ss_pred             CCCcCEEECCEEEEEECcc-cCHHHHHHHHhhccCCccccccCCHHHHHHHHHHHhcccccccchhhhhhhccc------
Confidence            9999999999999999995 999999999974  5899999999999999999987652 34456777776432      


Q ss_pred             cCcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeecch
Q psy14885        106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASI  184 (483)
Q Consensus       106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~~  184 (483)
                                    ....+.|.|+||+++.+  .+|.. |.   .++|+.+....+...|.+.+|.  .+++||||++.
T Consensus        75 --------------~~~~~~~~W~dG~~~~y--~n~~~-~~---~~~C~~~~~~~~~~~W~~~~C~--~~~~fICe~~~  131 (132)
T d1sb2a1          75 --------------KGQRSNLEWSDGSSISY--ENLYE-PY---MEKCFLMDHQSGLPKWHTADCE--EKNVFMCKFQL  131 (132)
T ss_dssp             --------------SSTTSSEEETTCCCCCC--CCBSS-CC---CEEEEEEEESSSSCEEEEECTT--SCEEEEEEEEC
T ss_pred             --------------cccccceecccCCcccc--eecCC-CC---CccEEEEEcCCCCCcEEecCCC--CCEeEEEEEeC
Confidence                          23567899999999876  67753 33   3689999876665679999999  99999999874

>d1v7pa_ d.169.1.1 (A:) Snake coagglutinin alpha chain {Snake (Echis multisquamatus), Ems16 [TaxId: 93050]}

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Snake coagglutinin alpha chain
species: Snake (Echis multisquamatus), Ems16 [TaxId: 93050]

Probab=99.88  E-value=4.9e-23  Score=175.60  Aligned_cols=127  Identities=17%  Similarity=0.323  Sum_probs=103.3

Q ss_pred             CCCcccccccCCeEEEEecCCCCCHHHHHHHhhhc--CCcccccCCHhHHHHHHHHhhhcCC-CCCceeeecccCCCCcc
Q psy14885         27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSL--DSDLANVNDADEHGFIMYQLFWQDP-QRRKWYFGGTQQSPNLW  103 (483)
Q Consensus        27 ~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~--g~~L~~i~s~~e~~~l~~~~~~~~~-~~~~~wig~~~~~~~~W  103 (483)
                      ..||+||+.|+++||+++... ++|.+|+..|+.+  ||+||+|+|.+|++||..++..... ....||||+++..    
T Consensus         2 ~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~~g~La~i~s~~e~~fi~~~~~~~~~~~~~~~WIGl~~~~----   76 (134)
T d1v7pa_           2 FDCPSDWTAYDQHCYLAIGEP-QNWYEAERFCTEQAKDGHLVSIQSREEGNFVAQLVSGFMHRSEIYVWIGLRDRR----   76 (134)
T ss_dssp             TTSCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCSHHHHHHHHHHTGGGGGSSCSEEEEEEECCC----
T ss_pred             CCCCCCCEEECCEEEEEECcc-cCHHHHHHhhcccCCCccccccCCHHHhHHHHhhcccccccccchhhhhccccC----
Confidence            469999999999999999995 9999999999764  8999999999999999999876532 3345677776433    


Q ss_pred             cccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885        104 VNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA  182 (483)
Q Consensus       104 ig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~  182 (483)
                                      ......|.|+||+++.+  ++|.+ +|+     +|+.+......+.|.+.+|.  ..++||||+
T Consensus        77 ----------------~~~~~~~~W~dgs~~~y--~~W~~~~p~-----~~~~~~~~~~~~~W~~~~C~--~~~~fICe~  131 (134)
T d1v7pa_          77 ----------------EEQQCNPEWNDGSKIIY--VNWKEGESK-----MCQGLTKWTNFHDWNNINCE--DLYPFVCKF  131 (134)
T ss_dssp             ----------------SSSCSCCBCTTSCBCCC--CCBCTTCCC-----CEEEEEGGGTTCSEEEECTT--SCEEEEEEE
T ss_pred             ----------------CcceeeeeecCCCcccc--cccCCCCCC-----ceeEEEEecCCCcEEeeCCC--CCEEEEEEE
Confidence                            11234678999999876  78999 885     57777655555679999999  999999999


Q ss_pred             c
Q psy14885        183 S  183 (483)
Q Consensus       183 ~  183 (483)
                      +
T Consensus       132 ~  132 (134)
T d1v7pa_         132 S  132 (134)
T ss_dssp             E
T ss_pred             e
Confidence            7

>d1j34b_ d.169.1.1 (B:) Snake coagglutinin beta chain {Habu snake (Trimeresurus flavoviridis) [TaxId: 88087]}

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Snake coagglutinin beta chain
species: Habu snake (Trimeresurus flavoviridis) [TaxId: 88087]

Probab=99.88  E-value=2.1e-23  Score=175.31  Aligned_cols=119  Identities=19%  Similarity=0.434  Sum_probs=97.9

Q ss_pred             CcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccccc
Q psy14885         29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNE  106 (483)
Q Consensus        29 C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~  106 (483)
                      ||+||+.|+++||+++... ++|.+|+..|+.  .||+|+.|+|.+|++||..++.... ....||||++          
T Consensus         2 Cp~gw~~~~~~CY~~~~~~-~~~~~A~~~C~~~~~gg~L~~i~s~~e~~~l~~~~~~~~-~~~~~WiGl~----------   69 (123)
T d1j34b_           2 CPSDWSSYEGHCYKPFSEP-KNWADAENFCTQQHAGGHLVSFQSSEEADFVVKLAFQTF-GHSIFWMGLS----------   69 (123)
T ss_dssp             CCTTSEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCSSHHHHHHHHHHHHHHH-CSCEEECSCC----------
T ss_pred             CCCCCEeECCEEEEEEccc-cCHHHHHHHHHhccCCCcccccCCHhHhhhhhhhhcccc-ceeEEeecee----------
Confidence            9999999999999999995 999999999975  4899999999999999999876542 2234555554          


Q ss_pred             CcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885        107 DDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS  183 (483)
Q Consensus       107 ~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~  183 (483)
                       +           ...++.|+|+||+++.+  ++|++      +++|+.+....+  .|.+.+|.  ..++||||++
T Consensus        70 -~-----------~~~~~~w~W~dg~~~~y--~~W~~------~~~Cv~~~~~~~--~W~~~~C~--~~~~fiCe~~  122 (123)
T d1j34b_          70 -N-----------VWNQCNWQWSNAAMLRY--KAWAE------ESYCVYFKSTNN--KWRSRACR--MMAQFVCEFQ  122 (123)
T ss_dssp             -S-----------CSTTSCEEETTCCCCCC--CCBSC------SCEEEEEETTSC--CBEEEETT--SCEEEEEEEE
T ss_pred             -c-----------ccccceeecCCCCcccc--cCCCC------CCCeEEEECCCC--EEEeeCCC--CCEeEEEEEc
Confidence             3           23567899999999876  78964      357999976544  59999999  9999999986

>d1umrc_ d.169.1.1 (C:) Snake coagglutinin beta chain {South american rattlesnake (Crotalus durissus terrificus), convulxin [TaxId: 8732]}

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Snake coagglutinin beta chain
species: South american rattlesnake (Crotalus durissus terrificus), convulxin [TaxId: 8732]

Probab=99.88  E-value=3.2e-23  Score=174.66  Aligned_cols=121  Identities=21%  Similarity=0.420  Sum_probs=99.0

Q ss_pred             CCCcccccccCCeEEEEecCCCCCHHHHHHHhhhc--CCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccc
Q psy14885         27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSL--DSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV  104 (483)
Q Consensus        27 ~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~--g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wi  104 (483)
                      ..||+||+.|+++||+++..+ ++|.+|+..|+++  ||+|++|+|++|++||..++.... ....||||+++.      
T Consensus         2 ~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~gg~La~i~~~~e~~~l~~~~~~~~-~~~~~WIGl~~~------   73 (125)
T d1umrc_           2 FCCPSHWSSYDRYCYKVFKQE-MTWADAEKFCTQQHTGSHLVSFHSTEEVDFVVKMTHQSL-KSTFFWIGANNI------   73 (125)
T ss_dssp             CCCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCSSHHHHHHHHHHHHTTC-SSSEEECSCCCT------
T ss_pred             CCCCccCEEECCEEEEEECCc-cCHHHHHHhhcccCCCCcccccCCHHHhhhhhhhhcccc-cceeEEEeeecc------
Confidence            369999999999999999996 9999999999764  899999999999999999886532 234455555432      


Q ss_pred             ccCcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885        105 NEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS  183 (483)
Q Consensus       105 g~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~  183 (483)
                                      ...+.|.|+||+++.+  .+|.+      +++|+.+....+  .|.+.+|+  ..++||||++
T Consensus        74 ----------------~~~~~w~W~dgs~~~y--~~w~~------~~~c~~~~~~~~--~W~~~~C~--~~~~fICe~~  124 (125)
T d1umrc_          74 ----------------WNKCNWQWSDGTKPEY--KEWHE------EFECLISRTFDN--QWLSAPCS--DTYSFVCKFE  124 (125)
T ss_dssp             ----------------TTSSCEEETTSCCCSS--CCBCC------CCEEEEEESSCS--CEEEEETT--SCEEEEEEEE
T ss_pred             ----------------ccccceEecCCCcccc--cCcCC------cCCeeEEECCCC--eEEeeCCC--CCEEEEEEEe
Confidence                            2567899999999876  78964      356998875543  59999999  9999999986

>d1c3ab_ d.169.1.1 (B:) Snake coagglutinin beta chain {Habu snake (Trimeresurus flavoviridis), flavocetin-A [TaxId: 88087]}

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Snake coagglutinin beta chain
species: Habu snake (Trimeresurus flavoviridis), flavocetin-A [TaxId: 88087]

Probab=99.88  E-value=2.5e-23  Score=175.33  Aligned_cols=120  Identities=18%  Similarity=0.332  Sum_probs=97.8

Q ss_pred             CCcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885         28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN  105 (483)
Q Consensus        28 ~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig  105 (483)
                      .||+||+.|+++||+++..+ ++|.+|+..|++  .||+|++|+|.+|++||..++.... ....|||           |
T Consensus         3 ~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~L~~i~s~~e~~~l~~~~~~~~-~~~~~Wi-----------G   69 (125)
T d1c3ab_           3 CCPLGWSSYDEHCYQVFQQK-MNWEDAEKFCTQQHKGSHLVSFHSSEEVDFVTSKTFPIL-KYDFVWI-----------G   69 (125)
T ss_dssp             CCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCSSHHHHHHHHHHHHHHH-CSCEEEC-----------S
T ss_pred             CCCCCCEEECCEEEEEECcc-cCHHHHHHhhccccCCCeecccCCHHHhhhhhhhhhccC-CceeEEE-----------E
Confidence            69999999999999999995 999999999964  5899999999999999998876542 2233444           5


Q ss_pred             cCcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885        106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS  183 (483)
Q Consensus       106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~  183 (483)
                      +++           ...++.|.|+||+++.+  ++|++      +++|+.+....+  .|++.+|+  ..++||||++
T Consensus        70 l~~-----------~~~~~~~~W~dGs~~~y--~~W~~------~e~Cv~~~~~~~--~W~~~~C~--~~~~fICe~~  124 (125)
T d1c3ab_          70 LSN-----------VWNECTKEWSDGTKLDY--KAWSG------GSDCIVSKTTDN--QWLSMDCS--SKYYVVCKFQ  124 (125)
T ss_dssp             CCC-----------TTTSSCEEETTCCCCCS--CCBCC------CCEEEEEESSSS--CEEEEETT--SCEEEEEEEE
T ss_pred             ecc-----------cCcceeeEeCCCCeeec--cccCC------CCceEEEECCCC--eEEeeCCC--CCEEEEEEEe
Confidence            443           23578899999999876  78965      346999865443  59999999  9999999986

>d1fvub_ d.169.1.1 (B:) Snake coagglutinin beta chain {Jararaca (Bothrops jararaca), botrocetin [TaxId: 8724]}

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Snake coagglutinin beta chain
species: Jararaca (Bothrops jararaca), botrocetin [TaxId: 8724]

Probab=99.88  E-value=3.3e-23  Score=174.52  Aligned_cols=120  Identities=21%  Similarity=0.364  Sum_probs=95.0

Q ss_pred             CcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccccc
Q psy14885         29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNE  106 (483)
Q Consensus        29 C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~  106 (483)
                      ||+||+.|+++||+++..+ ++|.+|+..|+.  .||+|++|+|++|++||..+++... ....||||++          
T Consensus         2 Cp~gw~~~~~~CY~~~~~~-~t~~~A~~~C~~~~~gg~L~~i~s~~e~~~l~~~~~~~~-~~~~~WiGl~----------   69 (125)
T d1fvub_           2 CPPDWSSYEGHCYRFFKEW-MHWDDAEEFCTEQQTGAHLVSFQSKEEADFVRSLTSEML-KGDVVWIGLS----------   69 (125)
T ss_dssp             CSTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCSSHHHHHHHHTTCTTSC-TTCCEECSCC----------
T ss_pred             CCCCCEeeCCEEEEEeCcc-CCHHHHHHhhhhccCCceecccCCHHHcccccccccccc-cceeEEeeee----------
Confidence            9999999999999999995 999999999964  5899999999999999999876542 2233455444          


Q ss_pred             CcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885        107 DDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS  183 (483)
Q Consensus       107 ~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~  183 (483)
                       +           ...++.|.|+||+++.+  .+|.+ .|     ++|+.+....+  .|.+.+|+  ..++||||++
T Consensus        70 -~-----------~~~~~~~~W~dg~~~~~--~~w~~~~~-----~~Cv~~~~~~~--~W~~~~C~--~~~~fICe~~  124 (125)
T d1fvub_          70 -D-----------VWNKCRFEWTDGMEFDY--DDYYLIAE-----YECVASKPTNN--KWWIIPCT--RFKNFVCEFQ  124 (125)
T ss_dssp             -C-----------CSTTSCEEETTSCCCCC------CCSC-----CEEEEEETTTT--EEEEEETT--SCEEEEEEEC
T ss_pred             -c-----------cCcccccEecCCCcccc--CCCCCCCC-----cceEEEEcCCC--EEEeeCCC--CCEEEEEEEc
Confidence             3           23578899999999976  77876 43     57999976544  59999999  9999999986

>d1jwib_ d.169.1.1 (B:) Snake coagglutinin beta chain {Puff adder (Bitis arietans), bitiscetin [TaxId: 8692]}

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Snake coagglutinin beta chain
species: Puff adder (Bitis arietans), bitiscetin [TaxId: 8692]

Probab=99.87  E-value=5.8e-23  Score=172.53  Aligned_cols=119  Identities=24%  Similarity=0.329  Sum_probs=97.4

Q ss_pred             CcccccccCCeEEEEecCCCCCHHHHHHHhhhc--CCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccccc
Q psy14885         29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSL--DSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNE  106 (483)
Q Consensus        29 C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~--g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~  106 (483)
                      ||+||+.|+++||+++..+ ++|.+|+..|++.  ||+||+|+|.+|++||..++.... ....||||+++..       
T Consensus         2 Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~gg~L~~i~s~~e~~~l~~~~~~~~-~~~~~WiGl~~~~-------   72 (123)
T d1jwib_           2 CLPDWSSYKGHCYKVFKVE-KTWADAEKFCKELVNGGHLMSVNSREEGEFISKLALEKM-RIVLVWIGLSHFW-------   72 (123)
T ss_dssp             CCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCSHHHHHHHHHHHHHTT-CCCEEEEEEEECG-------
T ss_pred             CCCCcEeeCCEEEEEeCcc-cCHHHHHHHhhhccCCccccccCCHHHhhhhhhheeccc-cccceEeeeeccC-------
Confidence            9999999999999999995 9999999999875  899999999999999998876542 3344666665332       


Q ss_pred             CcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885        107 DDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS  183 (483)
Q Consensus       107 ~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~  183 (483)
                                     .++.|.|+||+++.+  .+|..+      .+|+.+....+  .|.+.+|+  ..++||||.+
T Consensus        73 ---------------~~~~~~W~dgs~~~y--~~w~~~------~~c~~~~~~~~--~W~~~~C~--~~~~fiCe~k  122 (123)
T d1jwib_          73 ---------------RICPLRWTDGARLDY--RALSDE------PICFVAESFHN--KWIQWTCN--RKKSFVCKYR  122 (123)
T ss_dssp             ---------------GGSCEEETTCCCCCS--CCSCCS------CEEEEEETTTC--CEEEEETT--SCEEEEEEEE
T ss_pred             ---------------ccceeEccCCCCccc--ccCCCC------CCEEEEECCCC--eEEecCCC--CCEeEEEeEE
Confidence                           467899999999976  678433      36888765443  59999999  9999999986

>d3c8ja1 d.169.1.1 (A:138-259) NK cell receptor {Mouse (Mus musculus), ly49-c [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: NK cell receptor
species: Mouse (Mus musculus), ly49-c [TaxId: 10090]

Probab=99.87  E-value=5.7e-23  Score=172.36  Aligned_cols=119  Identities=19%  Similarity=0.334  Sum_probs=97.5

Q ss_pred             CCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccC
Q psy14885         28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNED  107 (483)
Q Consensus        28 ~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~  107 (483)
                      .|+.+|+.|+++||+|+... ++|.+|+..|+++||+||.|+|.+|++||..++.     ...||||+++..        
T Consensus         1 ~~~k~W~~~~~~CY~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~fi~~~~~-----~~~~WIGl~~~~--------   66 (122)
T d3c8ja1           1 RGVKYWFCYSTKCYYFIMNK-TTWSGCKANCQHYGVPILKIEDEDELKFLQRHVI-----PGNYWIGLSYDK--------   66 (122)
T ss_dssp             CCCEEEEEEETEEEEEEEEE-ECHHHHHHHHHHTTCCBCCCCSHHHHHHHHHHSC-----SSCEEEEEEEET--------
T ss_pred             CCCcccEEECCEEEEEeCCc-CCHHHHHHHHHhCCCcccceehHHHhhhhhhhhe-----eeeeEEEEEEcC--------
Confidence            48999999999999999995 9999999999999999999999999999998873     345666665432        


Q ss_pred             cccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecch
Q psy14885        108 DPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASI  184 (483)
Q Consensus       108 ~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~~  184 (483)
                                    .++.|.|+||+++.+  .+|.. +|.  ..++|+.+..    +.|.+.+|.  ..++||||++.
T Consensus        67 --------------~~~~w~W~dg~~~~~--~~~~~~~~~--~~~~Cv~~~~----~~w~~~~C~--~~~~~ICek~l  120 (122)
T d3c8ja1          67 --------------KKKEWAWIDNGPSKL--DMKIKKMNF--KSRGCVFLSK----ARIEDIDCN--IPYYCICGKKL  120 (122)
T ss_dssp             --------------TTTEEEETTSCCCTT--HHHHHTTCC--CSSSEEEECS----SCEEEECTT--SCEEEEEEEEC
T ss_pred             --------------CCCcEEECCCCcccc--cccCCCCCC--CCCCEEEEEC----CEEEEcCCC--CCEeEEEeEEC
Confidence                          467899999998865  33443 333  3578999843    259999999  99999999984

>d1qo3c_ d.169.1.1 (C:) NK cell receptor {Mouse (Mus musculus), ly49-a [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: NK cell receptor
species: Mouse (Mus musculus), ly49-a [TaxId: 10090]

Probab=99.87  E-value=1.2e-22  Score=172.93  Aligned_cols=123  Identities=20%  Similarity=0.250  Sum_probs=96.2

Q ss_pred             cccCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcc
Q psy14885         24 ELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLW  103 (483)
Q Consensus        24 ~~~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~W  103 (483)
                      .....|+.+|+.|+++||+|+..+ ++|.+|+..|+++||+||.|+|++|++||..++.     ...||||+++..    
T Consensus         9 ~~~~~c~~~W~~~~~~CY~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~-----~~~~WIGl~~~~----   78 (133)
T d1qo3c_           9 HTGRGDKVYWFCYGMKCYYFVMDR-KTWSGCKQTCQSSSLSLLKIDDEDELKFLQLVVP-----SDSCWVGLSYDN----   78 (133)
T ss_dssp             C-----CEEEEEETTEEEEEEEEE-ECHHHHHHHHHHTTCEECCCCSHHHHHHHHHHSC-----SSCEEEEEEEEG----
T ss_pred             cCCCCCCCceEEECCEEEEEECcc-CCHHHHHHHHHhcCCEEeEEeecceeeehhcccc-----cceeEEEEEEcC----
Confidence            336779999999999999999995 9999999999999999999999999999998873     345677765432    


Q ss_pred             cccCcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885        104 VNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS  183 (483)
Q Consensus       104 ig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~  183 (483)
                                        .++.|.|+||+++.+  ..|.+.|+ ..+++|+.+..    +.|.+.+|+  ..++|||||.
T Consensus        79 ------------------~~~~w~W~dg~~~~~--~~~~~~~~-~~~~~C~~l~~----~~w~~~~C~--~~~~~ICek~  131 (133)
T d1qo3c_          79 ------------------KKKDWAWIDNRPSKL--ALNTRKYN-IRDGGCMLLSK----TRLDNGNCD--QVFICICGKR  131 (133)
T ss_dssp             ------------------GGTEEEETTSCCCSS--CCCTTSSC-GGGCSEEEECS----SCEEEECTT--SCEEEEEEEE
T ss_pred             ------------------CCCCEEECCCCcccc--ccccCCCC-CCCCCEEEEEC----CEEEEcCCC--CCEEEEEeEE
Confidence                              467899999998754  34443333 34578999843    259999999  9999999997

>d1pwba1 d.169.1.1 (A:235-355) Surfactant protein, lectin domain {Human (Homo sapiens), SP-D [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Surfactant protein, lectin domain
species: Human (Homo sapiens), SP-D [TaxId: 9606]

Probab=99.85  E-value=5.5e-22  Score=166.00  Aligned_cols=118  Identities=18%  Similarity=0.290  Sum_probs=97.6

Q ss_pred             cccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccCcccc
Q psy14885         32 HWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQR  111 (483)
Q Consensus        32 gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~~~~~  111 (483)
                      ++..++++||+++... ++|.+|+..|+++||+||+|+|++|++||..++....              ..+|||+++   
T Consensus         2 ~g~~~g~~cy~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~~--------------~~~WiGl~~---   63 (121)
T d1pwba1           2 NGQSVGEKIFKTAGFV-KPFTEAQLLCTQAGGQLASPRSAAENAALQQLVVAKN--------------EAAFLSMTD---   63 (121)
T ss_dssp             TEEEETTEEEEEEEEE-EEHHHHHHHHHHTTSEECCCCSHHHHHHHHHHHHHHT--------------CCEECSCBC---
T ss_pred             CcEEECCEEEEEeCee-ECHHHHHHHHHHcCCEecceeechhhhhhhhccccce--------------eeeeeeeec---
Confidence            3457899999999995 9999999999999999999999999999999876431              234555544   


Q ss_pred             cccccCCcCCCCCccccCCCCccccccccCCC-CCCCcc-cCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885        112 RKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNV-QRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA  182 (483)
Q Consensus       112 ~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~-~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~  182 (483)
                              ...++.|.|.||+++.+  .+|.+ +|++.. .++|+.+...   ++|.+.+|+  ..++||||.
T Consensus        64 --------~~~~~~~~w~dg~~~~~--~~W~~~eP~~~~~~~~C~~~~~~---~~W~~~~C~--~~~~fICey  121 (121)
T d1pwba1          64 --------SKTEGKFTYPTGESLVY--SNWAPGEPNDDGGSEDCVEIFTN---GKWNDRACG--EKRLVVCEF  121 (121)
T ss_dssp             --------SSSTTCCBCTTSCBCSC--CCBCTTCCCCGGGCCCEEEECTT---SCEEEECTT--SEEEEEEEC
T ss_pred             --------cCccceeeecccccccc--ceecCCCCCCCCCceeEEEECCC---CEEEeeCCC--CCEEEEEeC
Confidence                    33578899999999876  88999 998764 5789999643   369999999  999999984

>d2msba_ d.169.1.1 (A:) Mannose-binding protein A, C-lectin domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Mannose-binding protein A, C-lectin domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.85  E-value=1e-21  Score=161.93  Aligned_cols=109  Identities=17%  Similarity=0.188  Sum_probs=91.9

Q ss_pred             eEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccCcccccccccCC
Q psy14885         39 SCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGG  118 (483)
Q Consensus        39 ~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~~~~~~~w~~~g  118 (483)
                      +||++..+ +++|.+|+..|+++||+||+|+|++|++||..++.      ..+|||+++.                    
T Consensus         2 k~y~~~~~-~~tw~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~------~~~WiGl~~~--------------------   54 (112)
T d2msba_           2 KFFVTNHE-RMPFSKVKALCSELRGTVAIPRNAEENKAIQEVAK------TSAFLGITDE--------------------   54 (112)
T ss_dssp             CEEEEEEE-EECHHHHHHHHHHTTCEECCCSSHHHHHHHHHHHS------SCEEEEEECS--------------------
T ss_pred             cEEEECCc-EeCHHHHHHHHHhCCCEEeeEcCHHHhhhhhhccc------ceEEEEEeec--------------------
Confidence            69999999 49999999999999999999999999999998763      2356666533                    


Q ss_pred             cCCCCCccccCCCCccccccccCCC-CCCCcc-cCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885        119 TQQSPNLWVNEDGTNLNELDAAFLP-EPADNV-QRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS  183 (483)
Q Consensus       119 ~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~-~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~  183 (483)
                        ..++.|.|.||+++.+  ++|.+ +|++.. +++||.+...   +.|.+.+|+  ..++||||+|
T Consensus        55 --~~~g~~~w~dg~~~~y--~~W~~~eP~~~~~~~~Cv~~~~~---~~W~~~~C~--~~~~fICe~P  112 (112)
T d2msba_          55 --VTEGQFMYVTGGRLTY--SNWKKDEPNDHGSGEDCVTIVDN---GLWNDISCQ--ASHTAVCEFP  112 (112)
T ss_dssp             --SSTTCCEETTSSBCCS--CCBCTTCCCCCTTCCCEEEECTT---SCEEEECTT--SCEEEEEEEC
T ss_pred             --Cccccccccccccccc--cccccCCCCCCCCCCCEEEEeCC---CEEEEeCCC--CcEEEEEecC
Confidence              2568899999999976  89999 998754 5689999542   359999999  9999999986

>d1jl1a_ c.55.3.1 (A:) RNase H (RNase HI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Ribonuclease H-like
family: Ribonuclease H
domain: RNase H (RNase HI)
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=1.1e-21  Score=170.98  Aligned_cols=127  Identities=18%  Similarity=0.242  Sum_probs=93.6

Q ss_pred             ceEe-eCCCCC--CCceEEEEEeCCCEE--EeC-CCCCcchHHHHHHHHHHHHHhHhcCCceEEEEeccHHHHHhhcccC
Q psy14885        221 DVVF-DLSKRN--SNTGFAFIINNENFQ--YRL-PHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGIDNIQ  294 (483)
Q Consensus       221 ~~~~-DgS~~~--~~~G~g~~~~~~~~~--~~l-~~~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs~~~~~~l~~~~  294 (483)
                      ..|| |||+.+  |++|+|+++...+..  +.. .+.+||++||++||+.||+.+.  ....+.|++||++++..+....
T Consensus         3 I~IYtDGS~~~N~g~aG~G~vi~~~~~~~~~~~~~~~~tnn~aE~~Ai~~Al~~~~--~~~~i~i~tds~~~i~~~~~~~   80 (152)
T d1jl1a_           3 VEIFTAGSALGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMELMAAIVALEALK--EHAEVILSTDSQYVRQGITQWI   80 (152)
T ss_dssp             EEEEEEEEESSTTEEEEEEEEEEETTEEEEEEEEEEEECHHHHHHHHHHHHHHTCC--SCCEEEEEECCHHHHHHHHTTH
T ss_pred             EEEEEeCCCCCCCCcEEEEEEEEECCeEEEeccccCcccHHHHHHhhhhhhhhhhc--ccceEEEeecceeeEEcccchh
Confidence            4567 999865  788999998765543  222 3567899999999999999875  4678999999999999886421


Q ss_pred             --------C---cchH-HHHHHHHHHHHhhCCCceEEEEeccCCCCcchHHHhHHHHhhhcCCCCCcc
Q psy14885        295 --------Q---RNNI-IQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAKNSINSKLLDFY  350 (483)
Q Consensus       295 --------~---~~~~-~~~i~~~~~~~~~~~~~v~~~WvpgH~g~~gNe~AD~lAk~a~~~~~~~~~  350 (483)
                              .   +..+ .......+..+. ....|+|+|||||+|++|||.||+|||+|+..+..+..
T Consensus        81 ~~~~~~~~~~~~~~~~~n~~~~~~i~~~~-~~~~V~~~wV~gH~g~~gNe~AD~LAk~aa~~~~~~d~  147 (152)
T d1jl1a_          81 HNWKKRGWKTADKKPVKNVDLWQRLDAAL-GQHQIKWEWVKGHAGHPENERADELARAAAMNPTLEDT  147 (152)
T ss_dssp             HHHHHTTTBCTTSCBCTTHHHHHHHHHHT-TTCEEEEEECCSSTTCHHHHHHHHHHHHHHHSCCBCCT
T ss_pred             hHhHhccchhcccCeeecHHHHHHHHHHh-hcceeEEEEecccCCCccHHHHHHHHHHHHhCCCCCcc
Confidence                    1   1111 122233333343 45689999999999999999999999999998766543

>d1r13a1 d.169.1.1 (A:110-228) Surfactant protein, lectin domain {Rat (Rattus norvegicus), SP-A [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Surfactant protein, lectin domain
species: Rat (Rattus norvegicus), SP-A [TaxId: 10116]

Probab=99.84  E-value=1.3e-21  Score=163.10  Aligned_cols=116  Identities=16%  Similarity=0.227  Sum_probs=97.9

Q ss_pred             cccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccCcccccc
Q psy14885         34 VQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRK  113 (483)
Q Consensus        34 ~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~~~~~~~  113 (483)
                      ..++++||+++.+. ++|.+|+..|+++||+||+|+|.+|++||..++...   ...+|||+.+.               
T Consensus         3 ~~vG~~cy~~~~~~-~~w~~A~~~C~~~gg~La~i~s~~e~~~l~~~~~~~---~~~~WiGl~~~---------------   63 (119)
T d1r13a1           3 LSVGDKVFSTNGQS-VNFDTIKEMCTRAGGNIAVPRTPEENEAIASIAKKY---NNYVYLGMIED---------------   63 (119)
T ss_dssp             EEETTEEEEEEEEE-ECHHHHHHHHHHTTSEECCCCSHHHHHHHHHHHHHT---TSCEEEEEEEC---------------
T ss_pred             ccCccEEEEECCEE-ECHHHHHHHhhhCCCEEeEEeehHHhhhhhhccccc---ceEEEEEeecC---------------
Confidence            46789999999994 999999999999999999999999999999988653   23456665532               


Q ss_pred             cccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885        114 WYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA  182 (483)
Q Consensus       114 w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~  182 (483)
                             ..++.|.|.||+++.+  .+|.+ +|++...++|+.+...   +.|.+.+|.  ..++||||.
T Consensus        64 -------~~~~~w~w~dg~~~~y--~~W~~~~P~~~~~~~Cv~~~~~---~~W~~~~C~--~~~~~ICey  119 (119)
T d1r13a1          64 -------QTPGDFHYLDGASVSY--TNWYPGEPRGQGKEKCVEMYTD---GTWNDRGCL--QYRLAVCEF  119 (119)
T ss_dssp             -------SSTTCEEETTSCBCCS--CCBCTTCCCCSSCCCEEEECTT---SCEEEECSC--SCEEEEEEC
T ss_pred             -------Ccceeeeeeccccccc--ceEEeeccCCCCCCCEEEEcCC---CEEEecCCC--CCEeEEEeC
Confidence                   2577899999999876  89999 9988777889999643   359999999  999999994

>d1rila_ c.55.3.1 (A:) RNase H (RNase HI) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Ribonuclease H-like
family: Ribonuclease H
domain: RNase H (RNase HI)
species: Thermus thermophilus [TaxId: 274]

Probab=99.84  E-value=5.2e-22  Score=172.02  Aligned_cols=122  Identities=12%  Similarity=0.135  Sum_probs=89.5

Q ss_pred             ceEe-eCCCCC--CCceEEEEEeCCCEE---EeCCCCCcchHHHHHHHHHHHHHhHhcCCceEEEEeccHHHHHhhcccC
Q psy14885        221 DVVF-DLSKRN--SNTGFAFIINNENFQ---YRLPHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGIDNIQ  294 (483)
Q Consensus       221 ~~~~-DgS~~~--~~~G~g~~~~~~~~~---~~l~~~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs~~~~~~l~~~~  294 (483)
                      .+|| |||+.+  |+.|+|+++...+..   ......+||++||+.||+.||+.+.  ....+.|++||+++++.+...+
T Consensus         4 i~iytDGs~~~N~g~~G~g~vi~~~~~~~~~~~~~~~~Tnn~aEl~Ai~~AL~~~~--~~~~i~i~tds~~~~~~~~~~~   81 (147)
T d1rila_           4 VALFTDGACLGNPGPGGWAALLRFHAHEKLLSGGEACTTNNRMELKAAIEGLKALK--EPCEVDLYTDSHYLKKAFTEGW   81 (147)
T ss_dssp             CCEEEEEEESSTTEEEEEEEEECBTTBCCEECCEEEEECHHHHHHHHHHHHHHSCC--SCCEEEEECCCHHHHHHHHSSH
T ss_pred             EEEEEccCCCCCCCccEEEEEEEECCcceEEecccccccHHHHHHHHHHHHhhhcc--CCceEEEecchhhhhccccccc
Confidence            4566 999876  678999988654332   1123567999999999999999865  4678999999999999886521


Q ss_pred             C------------cchHH-HHHHHHHHHHhhCCCceEEEEeccCCCCcchHHHhHHHHhhhcCC
Q psy14885        295 Q------------RNNII-QLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAKNSINSK  345 (483)
Q Consensus       295 ~------------~~~~~-~~i~~~~~~~~~~~~~v~~~WvpgH~g~~gNe~AD~lAk~a~~~~  345 (483)
                      .            ..++. .++++.+..+. +...|+|+|||||+|++|||.||+|||+|+...
T Consensus        82 ~~~~~~~~~~~~~~~~v~n~dL~~~l~~~~-~~~~v~~~wVkgHsg~~gNe~AD~LAk~aa~~~  144 (147)
T d1rila_          82 LEGWRKRGWRTAEGKPVKNRDLWEALLLAM-APHRVRFHFVKGHTGHPENERVDREARRQAQSQ  144 (147)
T ss_dssp             HHHHHHTTSBCTTSSBCTTHHHHHHHHHHH-TTSEEECCCCCGGGSCTHHHHHHHHHHHHHTSS
T ss_pred             hhhhhhccccccccccchhHHHHHHHHHHh-hhcccceEEccCCCCCcchHHHHHHHHHHHHHh
Confidence            0            11111 22333333443 467899999999999999999999999998764

>d1hupa1 d.169.1.1 (A:112-228) Mannose-binding protein A, C-lectin domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Mannose-binding protein A, C-lectin domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=1.6e-21  Score=162.16  Aligned_cols=113  Identities=19%  Similarity=0.270  Sum_probs=95.5

Q ss_pred             ccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccCccccccc
Q psy14885         35 QYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKW  114 (483)
Q Consensus        35 ~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~~~~~~~w  114 (483)
                      +++++||+++.+. ++|.+|+..|++.||+||+|+|++|++||..++.      ..+|||+++..               
T Consensus         2 ~vG~~~y~~~~~~-~tw~~A~~~C~~~gg~La~i~s~~e~~~l~~~~~------~~~WiGl~~~~---------------   59 (117)
T d1hupa1           2 QVGNKFFLTNGEI-MTFEKVKALCVKFQASVATPRNAAENGAIQNLIK------EEAFLGITDEK---------------   59 (117)
T ss_dssp             EETTEEEEEEEEE-EEHHHHHHHHHHTTCEECCCCSHHHHHHHHHHCS------SCEEEEEECSS---------------
T ss_pred             cccCEEEEEcCEE-ECHHHHHHHHHHCCCEEcccCCHHHHHHHhhccc------ceEEEEeeccC---------------
Confidence            5788999999994 9999999999999999999999999999998873      24666665432               


Q ss_pred             ccCCcCCCCCccccCCCCccccccccCCC-CCCCcc-cCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885        115 YFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNV-QRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS  183 (483)
Q Consensus       115 ~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~-~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~  183 (483)
                             .++.|.|.||+++.+  .+|.+ +|++.. +++||.+...   +.|.+.+|+  ..++||||+|
T Consensus        60 -------~~~~w~w~dg~~~~~--~~w~~~~p~~~~~~~~Cv~~~~~---~~W~~~~C~--~~~~fICe~P  116 (117)
T d1hupa1          60 -------TEGQFVDLTGNRLTY--TNWNEGEPNNAGSDEDCVLLLKN---GQWNDVPCS--TSHLAVCEFP  116 (117)
T ss_dssp             -------STTCCEETTSCBCSC--CCBCTTCCCCGGGCCCEEEECTT---SCEEEECTT--SEEEEEEEEE
T ss_pred             -------cccceeecccccccc--cccCCCCCCCCCCcCCeEEECCC---CeEEeeCCC--CCEEEEEEEe
Confidence                   467899999999876  78999 998754 5789998643   359999999  9999999997

>d1rdl1_ d.169.1.1 (1:) Mannose-binding protein A, C-lectin domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Mannose-binding protein A, C-lectin domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.82  E-value=1.7e-20  Score=154.24  Aligned_cols=108  Identities=19%  Similarity=0.274  Sum_probs=90.2

Q ss_pred             eEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccCcccccccccCC
Q psy14885         39 SCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGG  118 (483)
Q Consensus        39 ~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~~~~~~~w~~~g  118 (483)
                      +||.++.. +++|.+|+..|+++||+||+|++++|++||..++.      ..+|||+++..                   
T Consensus         1 kyy~~~~~-~~~~~~A~~~C~~~gg~La~i~s~~e~~~l~~~~~------~~~WiGl~~~~-------------------   54 (111)
T d1rdl1_           1 KYFMSSVR-RMPLNRAKALCSELQGTVATPRNAEENRAIQNVAK------DVAFLGITDQR-------------------   54 (111)
T ss_dssp             CEEEECSS-CBCHHHHHHHHHHTTCEECCCCSHHHHHHHHHHCS------SCEEEEEECSS-------------------
T ss_pred             CEEEECCc-EeCHHHHHHHHHHcCCEEEEECCHHHhHHHhhccc------ceeeEEeeecC-------------------
Confidence            47888888 59999999999999999999999999999998763      23566665332                   


Q ss_pred             cCCCCCccccCCCCccccccccCCC-CCCCcc-cCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885        119 TQQSPNLWVNEDGTNLNELDAAFLP-EPADNV-QRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA  182 (483)
Q Consensus       119 ~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~-~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~  182 (483)
                         .++.|.|.||+++.+  ++|.+ +|++.. .++|+.+...   +.|.|.+|+  ..++||||.
T Consensus        55 ---~~~~~~w~dG~~~~y--~~W~~geP~~~~~~~~Cv~~~~~---g~W~d~~C~--~~~~fICe~  110 (111)
T d1rdl1_          55 ---TENVFEDLTGNRVRY--TNWNEGEPNNVGSGENCVVLLTN---GKWNDVPCS--DSFLVVCEF  110 (111)
T ss_dssp             ---STTCCEETTSCBCCC--CCBCTTCCCCCTTCCCEEEECTT---SCEEEECTT--SCBEEEEEE
T ss_pred             ---ccceeeeccccccee--eeccccCCCCCCCcceEEEECCC---CEEEeeCCC--CCEEEEEEE
Confidence               567899999999876  88999 998754 5689999643   359999999  999999996

>d1h8ua_ d.169.1.1 (A:) Eosinophil major basic protein {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Eosinophil major basic protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=2e-20  Score=154.90  Aligned_cols=112  Identities=19%  Similarity=0.266  Sum_probs=92.1

Q ss_pred             EEEecCCCCCHHHHHHHhhh-cCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccCcccccccccCCc
Q psy14885         41 YRFVKSPLKTRNDAKLNCKS-LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGT  119 (483)
Q Consensus        41 y~~~~~~~~tw~~A~~~C~~-~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~~~~~~~w~~~g~  119 (483)
                      |+++..+ ++|.+|+..|++ +||+||+|++.+|++||..++...  ....||||+....                    
T Consensus         2 Y~~~~~~-~tw~~A~~~C~~~~gg~L~sI~s~~e~~~i~~~~~~~--~~~~~WIGl~~~~--------------------   58 (115)
T d1h8ua_           2 YLLVRSL-QTFSQAWFTCRRCYRGNLVSIHNFNINYRIQCSVSAL--NQGQVWIGGRITG--------------------   58 (115)
T ss_dssp             EEEEEEE-ECHHHHHHHHHHHHSSEECCCCSHHHHHHHHHHHTTC--SSSEEEEEEEEEC--------------------
T ss_pred             eEEECCc-cCHHHHHHHhhcccCCcCcccCHHHHHHHHHHHHhhc--CCCcEEEEEEecC--------------------
Confidence            7888886 999999999987 799999999999999999998765  2346777765321                    


Q ss_pred             CCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885        120 QQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA  182 (483)
Q Consensus       120 ~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~  182 (483)
                      ....+.|.|+||+++.+  .+|++ +|++. .++||.+....  +.|.+.+|+  ..++||||.
T Consensus        59 ~~~~~~~~W~dGs~~~y--~~W~~~~P~~~-~~~Cv~~~~~~--g~W~~~~C~--~~~~fICe~  115 (115)
T d1h8ua_          59 SGRCRRFQWVDGSRWNF--AYWAAHQPWSR-GGHCVALCTRG--GYWRRAHCL--RRLPFICSY  115 (115)
T ss_dssp             SSSCCEEEETTCCCCCC--CCBCSSSCCTT-SCSEEEEETTT--TCEEEECTT--SCEEEEEEC
T ss_pred             CCCcceEEEecCceeec--ccccCCCCCCC-CCCEEEEECCC--CEEEeeCCC--CCEeeEEeC
Confidence            22457899999999876  89999 99875 47899986544  369999999  999999984

>d1kg0c_ d.169.1.1 (C:) EBV gp42 {Epstein-Barr virus [TaxId: 10376]}

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: EBV gp42
species: Epstein-Barr virus [TaxId: 10376]

Probab=99.77  E-value=2.7e-19  Score=152.11  Aligned_cols=116  Identities=13%  Similarity=0.138  Sum_probs=93.1

Q ss_pred             CCcccccccCCeEEEEecCCCCCHHHHHHHhhhcC-CcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccccc
Q psy14885         28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLD-SDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNE  106 (483)
Q Consensus        28 ~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g-~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~  106 (483)
                      .||++|+.|+++||+|+... ++|.+|+..|++.+ ++|+.|++++|+.||..++.    ....||||+.+.        
T Consensus        18 ~~~~~~~~~~~~CY~~~~~~-~tw~~A~~~C~~~~~~~L~~i~~~~e~~fl~~~~~----~~~~~WIGL~~~--------   84 (136)
T d1kg0c_          18 NTREYTFSYKGCCFYFTKKK-HTWNGCFQACAEKYPCTYFYGPTPDILPVVTRNLN----AIESLWVGVYRV--------   84 (136)
T ss_dssp             CTTTCSEEETTEEEEECSSC-BCTTHHHHHHHHHSTTCEECCCCTTTHHHHHHTSC----SSCCEECSEEES--------
T ss_pred             CCCCCeEeECCEEEEEEccc-CcHHHHHHHHhcCCCCcEeccCCHHHHHHHHHhcC----CCCcEEEEEEec--------
Confidence            46899999999999999995 99999999999865 68999999999999998764    234566666532        


Q ss_pred             CcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885        107 DDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS  183 (483)
Q Consensus       107 ~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~  183 (483)
                                     .++.|.|+||+++..    |.     ..+++|+.+..... ..|.+.+|+  ..++|||+..
T Consensus        85 ---------------~~~~W~W~Dgs~~~~----~~-----~~~~~C~~l~~~~~-~~w~~~~C~--~~~~~IC~~~  134 (136)
T d1kg0c_          85 ---------------GEGNWTSLDGGTFKV----YQ-----IFGSHCTYVSKFST-VPVSHHECS--FLKPCLCVSQ  134 (136)
T ss_dssp             ---------------SSSSEEETTCSCCCC----BC-----SSCTTCEEECTTCS-SCEECSCTT--SCBCBEEEEE
T ss_pred             ---------------CCCceEECCCCcccc----cc-----ccccceEEEEecCC-CcEeecCCC--CCcceEEEEe
Confidence                           257799999997643    31     12478999976544 369999999  9999999986

>d1wk1a_ d.169.1.1 (A:) Hypothetical protein F28B4.3 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Hypothetical protein F28B4.3
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.77  E-value=2.3e-19  Score=155.66  Aligned_cols=116  Identities=17%  Similarity=0.257  Sum_probs=94.1

Q ss_pred             CeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccCcccccccccC
Q psy14885         38 DSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFG  117 (483)
Q Consensus        38 ~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~~~~~~~w~~~  117 (483)
                      .+||.++.. .++|.+|+.+|+++||+||+|++++|++||..++.     ...||||+++.                   
T Consensus         8 ~~~~~~~~~-~~s~~~A~~~C~~~gg~La~i~~~~e~~fi~~~~~-----~~~~WiGl~~~-------------------   62 (150)
T d1wk1a_           8 VKFLTVNDD-ILSMPQARNFCASAGGYLADDLGDDKNNFYSSIAA-----NTQFWIGLFKN-------------------   62 (150)
T ss_dssp             CCSSSCCSS-CBCHHHHHHHHHHHTCEECCCCSHHHHHHHHHHTT-----TCEEEEEEEEC-------------------
T ss_pred             cEEEEEeCC-ccCHHHHHHHHHhCCCEEeeeCCHHHHHHhhhccc-----ccceeEeeeec-------------------
Confidence            457777888 59999999999999999999999999999999873     45677777642                   


Q ss_pred             CcCCCCCccccCCCCcccc-----ccccCCC-CCCCcccCCeEEEeccccc--ccccccccCCCCceeeeeecch
Q psy14885        118 GTQQSPNLWVNEDGTNLNE-----LDAAFLP-EPADNVQRDYLAYSFSQSL--KRWGFERVTGMEPLLFICEASI  184 (483)
Q Consensus       118 g~~~~~~~~~W~dg~~~~~-----~~~~w~~-~P~~~~~~~Cv~~~~~~~~--~~W~~~~C~~~~~~~fvCe~~~  184 (483)
                          .++.|.|+||+++..     ...+|++ +|++...++|+.+....+.  ..|.+.+|.  ..++||||++.
T Consensus        63 ----~~g~w~W~dg~~~~~~~~~~~~~~W~~~eP~~~~~~~C~~~~~~~~~~~~~W~~~~C~--~~~~fICe~~~  131 (150)
T d1wk1a_          63 ----SDGQFYWDRGQGINPDLLNQPITYWANGEPSNDPTRQCVYFDGRSGDKSKVWTTDTCA--TPRPFICQKHR  131 (150)
T ss_dssp             ----SSSCEEECCSSSSCCEECCCSCCCBCTTCSCCCSSCCEEEEESSCSCGGGCEEEECTT--SCBCCCEECCC
T ss_pred             ----ccccccccccccccccccccccccccCCCCCCCCCcceEEEeccCCCCCCceEccCCC--CCEeEEEEECC
Confidence                256789999987642     1278999 9988777889999765432  369999999  99999999974

>d1g1ta1 d.169.1.1 (A:1-118) E-selectin, C-lectin domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: E-selectin, C-lectin domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=4.7e-18  Score=140.95  Aligned_cols=113  Identities=19%  Similarity=0.352  Sum_probs=86.2

Q ss_pred             eEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccCcccccccccCC
Q psy14885         39 SCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGG  118 (483)
Q Consensus        39 ~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~~~~~~~w~~~g  118 (483)
                      .+|+++..+ ++|.+|+..|++.||+||+|+|++|++||..++...   ...||||++           +          
T Consensus         1 ~~Y~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~---~~~~WiGl~-----------~----------   55 (118)
T d1g1ta1           1 WSYNTSTEA-MTYDEASAYCQQRYTHLVAIQNKEEIEYLNSILSYS---PSYYWIGIR-----------K----------   55 (118)
T ss_dssp             CEEEECSSC-BCHHHHHHHHHHHSSEECCCCSHHHHHHHHHHSCCC---TTCEEESEE-----------E----------
T ss_pred             CEEEEeCCc-cCHHHHHHHHHHCCCEEeEEccHHHhHHHHhccccc---cceeeeccc-----------c----------
Confidence            379999995 999999999999999999999999999999988532   234555554           3          


Q ss_pred             cCCCCCccccCCCCcc-ccccccCCC-CCCCcc-cCCeEEEeccc--ccccccccccCCCCceeeeee
Q psy14885        119 TQQSPNLWVNEDGTNL-NELDAAFLP-EPADNV-QRDYLAYSFSQ--SLKRWGFERVTGMEPLLFICE  181 (483)
Q Consensus       119 ~~~~~~~~~W~dg~~~-~~~~~~w~~-~P~~~~-~~~Cv~~~~~~--~~~~W~~~~C~~~~~~~fvCe  181 (483)
                         ..+.|.|.||+.. .....+|.+ +|++.. .++||.+....  ..+.|+|.+|+  ..++|||-
T Consensus        56 ---~~~~~~w~~~~~~~~~~~~~W~~~eP~~~~~~~~Cv~l~~~~~~~~~~W~d~~C~--~~~~fIC~  118 (118)
T d1g1ta1          56 ---VNNVWVWVGTQKPLTEEAKNWAPGEPNNRQKDEDCVEIYIKREKDVGMWNDERCS--KKKLALCY  118 (118)
T ss_dssp             ---ETTEEEETTTCCBCCTTTCCBCTTCCCCCSTTCCEEEECTTCSSSTTCEEEECTT--SCBEEEEE
T ss_pred             ---cceeeeeecCCCCccccccccCCCCccCCCCCCCeEEEEecCCCCCCeEeccCCC--CCeeEEcC
Confidence               2456777777532 112288999 998644 56899995432  22469999999  99999993

>d1s1ta1 c.55.3.1 (A:430-539) HIV RNase H (Domain of reverse transcriptase) {Human immunodeficiency virus type 1 [TaxId: 11676]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Ribonuclease H-like
family: Ribonuclease H
domain: HIV RNase H (Domain of reverse transcriptase)
species: Human immunodeficiency virus type 1 [TaxId: 11676]

Probab=99.71  E-value=8.2e-18  Score=136.83  Aligned_cols=97  Identities=13%  Similarity=0.266  Sum_probs=72.9

Q ss_pred             ceEe-eCCCCC--CCceEEEEEeCCCEEEeCCCCCcchHHHHHHHHHHHHHhHhcCCceEEEEeccHHHHHhhcccCCc-
Q psy14885        221 DVVF-DLSKRN--SNTGFAFIINNENFQYRLPHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGIDNIQQR-  296 (483)
Q Consensus       221 ~~~~-DgS~~~--~~~G~g~~~~~~~~~~~l~~~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs~~~~~~l~~~~~~-  296 (483)
                      .++| |||+..  +..|+|+++.+..........+||++|||.||+.||+.    ...++.|+|||++|+++|.+.... 
T Consensus         9 ~t~ytDGs~~~n~~~g~~g~~~~~~~~~~~~~~~~TNn~aEl~Avi~aL~~----~~~~v~I~TDS~yvi~~i~~~~~~~   84 (110)
T d1s1ta1           9 ETFYVDGAANRETKLGKAGYVTNRGRQKVVTLTDTTNQKTELQAIYLALQD----SGLEVNIVTDSQYALGIIQAQPDQS   84 (110)
T ss_dssp             EEEEEEEEEETTTTEEEEEEEETTSCEEEEEESSCCHHHHHHHHHHHHHHH----SCSEEEEEECCHHHHHHHHHCCSEE
T ss_pred             cEEEEeCCCCCCCCCcEEEEEEecCCeEEEecccCcHHHHHHHHHHHHHHh----CCCeEEEEEehHHHHHHHhcCcccc
Confidence            4567 999654  67778888876554433345679999999999999985    356899999999999999986553 


Q ss_pred             -chHHHHHHHHHHHHhhCCCceEEEEeccC
Q psy14885        297 -NNIIQLIKQEYYFASTNGSQISFMWIPSH  325 (483)
Q Consensus       297 -~~~~~~i~~~~~~~~~~~~~v~~~WvpgH  325 (483)
                       +++.++|.+.   + .....|.+.|||||
T Consensus        85 ~~~l~~~il~~---l-~~~~~v~i~WVpgH  110 (110)
T d1s1ta1          85 ESELVNQIIEQ---L-IKKEKVYLAWVPAH  110 (110)
T ss_dssp             SCHHHHHHHHH---H-HHCSEEEEEECCSS
T ss_pred             chHHHHHHHHH---H-hcCCceEEEEeCCC
Confidence             4555555433   3 23578999999999

>d1byfa_ d.169.1.1 (A:) Lectin TC14 {Tunicate (Polyandrocarpa misakiensis) [TaxId: 7723]}

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: Lectin TC14
species: Tunicate (Polyandrocarpa misakiensis) [TaxId: 7723]

Probab=99.70  E-value=1.2e-17  Score=139.08  Aligned_cols=120  Identities=16%  Similarity=0.149  Sum_probs=93.3

Q ss_pred             CeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccCcccccccccC
Q psy14885         38 DSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFG  117 (483)
Q Consensus        38 ~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~~~~~~~w~~~  117 (483)
                      +..|.|+.. .++|.+|+..|+++||+|+.|.+++|+.++..+..... ....+|||+++..                  
T Consensus         1 ~y~~~f~~~-~~tw~~A~~~C~~~g~~La~i~~~~~~~~~~~~~~~~~-~~~~~WiG~~~~~------------------   60 (123)
T d1byfa_           1 DYEILFSDE-TMNYADAGTYCQSRGMALVSSAMRDSTMVKAILAFTEV-KGHDYWVGADNLQ------------------   60 (123)
T ss_dssp             CEEEEEEEE-EECHHHHHHHHHTTTCEESCGGGGSHHHHHHHHHHHHH-HTCCEEEEEESTT------------------
T ss_pred             CeEEEEECc-EeCHHHHHHHHHHCCCCCCccCCHHHHHHHHHHHhccC-CCccEEEeecccc------------------
Confidence            356888888 49999999999999999999999999999876654332 2345666665432                  


Q ss_pred             CcCCCCCccccCCCCccccccccCCC-CCCCcc-cCCeEEEecccccccccccccCCCCceeeeeecch
Q psy14885        118 GTQQSPNLWVNEDGTNLNELDAAFLP-EPADNV-QRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASI  184 (483)
Q Consensus       118 g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~-~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~~  184 (483)
                         .....|.|.+|.++.....+|.+ +|++.. .++||.+....+  .|.+.+|+  .+++||||++.
T Consensus        61 ---~~~~~w~~~~~~~~~~~~~~~~~~~p~~~~~~~~Cv~l~~~~~--~W~~~~C~--~~~~fICe~~~  122 (123)
T d1byfa_          61 ---DGAYNFLWNDGVSLPTDSDLWSPNEPSNPQSWQLCVQIWSKYN--LLDDVGCG--GARRVICEKEL  122 (123)
T ss_dssp             ---TCTTCCEETTSCBCCTTCTTBCTTCSCSCTTSCCEEEEETTTT--EEEEECSC--SCEEEEEEEEC
T ss_pred             ---ccccccccccCCccccccccccccccccccCcceeEEEecCCC--eEeeeCCC--CCEeEEEEEcc
Confidence               12345889999987666688999 998743 578999976543  59999999  99999999973

>d1g1sa1 d.169.1.1 (A:1-118) P-selectin, C-lectin domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: C-type lectin domain
domain: P-selectin, C-lectin domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=1e-17  Score=138.89  Aligned_cols=110  Identities=15%  Similarity=0.318  Sum_probs=84.8

Q ss_pred             EEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccCcccccccccCCcC
Q psy14885         41 YRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQ  120 (483)
Q Consensus        41 y~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~~~~~~~w~~~g~~  120 (483)
                      |+|+..+ ++|.+|+..|+++||+|++|+|++|++||..++...   ...||||+++.                      
T Consensus         3 Y~~~~~~-~~w~~A~~~C~~~gg~La~i~s~~e~~fl~~~~~~~---~~~~WiGl~~~----------------------   56 (118)
T d1g1sa1           3 YHYSTKA-YSWNISRKYCQNRYTDLVAIQNKNEIDYLNKVLPYY---SSYYWIGIRKN----------------------   56 (118)
T ss_dssp             EEEEEEE-ECHHHHHHHHHHHSSEECCCCCHHHHHHHHHHSCCC---TTCEEEEEEEE----------------------
T ss_pred             EEEECCc-cCHHHHHHHHHHcCCEEeEEeCHHHHHHHHhhhccc---cccchhhcccc----------------------
Confidence            8899995 999999999999999999999999999999988533   23456665532                      


Q ss_pred             CCCCccccCCCCc--cccccccCCC-CCCCcc-cCCeEEEecccc--cccccccccCCCCceeeeee
Q psy14885        121 QSPNLWVNEDGTN--LNELDAAFLP-EPADNV-QRDYLAYSFSQS--LKRWGFERVTGMEPLLFICE  181 (483)
Q Consensus       121 ~~~~~~~W~dg~~--~~~~~~~w~~-~P~~~~-~~~Cv~~~~~~~--~~~W~~~~C~~~~~~~fvCe  181 (483)
                        .+.|.|+||..  ...+ .+|.+ ||++.. +++||.+.....  .+.|.+.+|.  ..++|||-
T Consensus        57 --~~~~~W~~~~~~~~~~~-~~W~~~eP~~~~~~~~Cv~~~~~~~~~~~~W~d~~C~--~~~~fIC~  118 (118)
T d1g1sa1          57 --NKTWTWVGTKKALTNEA-ENWADNEPNNKRNNEDCVEIYIKSPSAPGKWNDEHCL--KKKHALCY  118 (118)
T ss_dssp             --TTEEEETTTCCBCCTTT-CCBCTTCCCCTTSCCCEEEECTTCSSSTTCEEEECTT--SCEEEEEE
T ss_pred             --ccccceecCCCCcccee-cccCCCCCCCCCCCCCeEEEEccCCCCCCeEEeeCCC--CCEeEEcC
Confidence              34566766653  3333 78999 997754 578999954332  2469999999  99999993

>d1zbfa1 c.55.3.1 (A:62-193) BH0863-like Ribonuclease H {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Ribonuclease H-like
family: Ribonuclease H
domain: BH0863-like Ribonuclease H
species: Bacillus halodurans [TaxId: 86665]

Probab=99.57  E-value=5.1e-16  Score=128.25  Aligned_cols=111  Identities=10%  Similarity=0.074  Sum_probs=83.9

Q ss_pred             eEeeCCCCC--CCceEEEEEeCCCEEEeC---CCCCcchHHHHHHHHHHHHHhHhcCCceEEEEeccHHHHHhhcccC--
Q psy14885        222 VVFDLSKRN--SNTGFAFIINNENFQYRL---PHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGIDNIQ--  294 (483)
Q Consensus       222 ~~~DgS~~~--~~~G~g~~~~~~~~~~~l---~~~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs~~~~~~l~~~~--  294 (483)
                      +++|||+.+  |++|+|+|+...+.....   -+.+||++||++|++.||+.+.+.+ .++.|+|||++|++.+.+..  
T Consensus         7 Iy~DGa~~GNPGp~g~g~v~~~~~~~~~~sg~~~~~TNN~aEl~A~i~aL~~~~~~~-~~i~I~tDS~yvi~wv~~~~~k   85 (132)
T d1zbfa1           7 LSVDVGSQGNPGIVEYKGVDTKTGEVLFEREPIPIGTNNMGEFLAIVHGLRYLKERN-SRKPIYSNSQTAIKWVKDKKAK   85 (132)
T ss_dssp             EEEEEEECSSSEEEEEEEEETTTCCEEEECCCEEEECHHHHHHHHHHHHHHHHHHTT-CCCCEEESCHHHHHHHHHTCCC
T ss_pred             EEEeecCCCCCchheEEEEEEcCCEEEEEEcCcCccchHHHHHHHHHHHHHHhhcCC-ceEEEEeccHHHHHHHHhCcee
Confidence            444999877  899999988765543222   2578999999999999999997754 57999999999999997632  


Q ss_pred             -------CcchHHHHHHHHHHHHhhCCCceEEEEeccCCCCcchHHHh
Q psy14885        295 -------QRNNIIQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKAD  335 (483)
Q Consensus       295 -------~~~~~~~~i~~~~~~~~~~~~~v~~~WvpgH~g~~gNe~AD  335 (483)
                             ...++.+.+.++...+.  ...+.+.||+.|+..-||..||
T Consensus        86 t~~~~~vkN~~l~~~i~~a~~~lk--~h~~~~~~~KW~~~~wG~i~AD  131 (132)
T d1zbfa1          86 STLVRNEETALIWKLVDEAEEWLN--THTYETPILKWQTDKWGEIKAD  131 (132)
T ss_dssp             CCCCCSTTTHHHHHHHHHHHHHHH--HCCCCCCEEECCHHHHCSCTTC
T ss_pred             cCcCCCcccHHHHHHHHHHHHHHH--hCCcCceeEEecCcccccCCCC
Confidence                   12344455544433343  3568899999999999999998